# Auto-generated by runBuild_db.sh from source_plan.normalized.tsv
# Direct mod_IV (supported collection) runtime variables.
export crap_dir=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data
export crap_fasta=''
export crap_set=ccp
export gca_info_file=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/GCA_ID_info_V11.03.txt
export homd_fasta_file=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/homd_proteins.fasta
export homd_filtered_tax=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/homd_taxonomy_filtered.tsv
export homd_genomic_refseq_version=V11.03
export homd_proteomes_dir=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/proteomes
export homd_rank=family
export homd_sites=oral
export homd_tax_file=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/homd_taxonomy.tsv
export homd_tax_raw_file=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/homd/homd_taxonomy_raw.tsv
export human_fasta_file=/projects/academic/kmkauffm/kauffman/ZZ.daysDir/2026.214_maniFasta_AllOralsDB_flavor_builds/maniFasta-dev/20260803_090705_AllOralsDB.v2026.215_F/run_data/human/human_proteins.canonical_isoform.fasta
export human_protein_set=canonical_isoform
export use_homd=true
export use_homd_download=true
export use_human=true
export use_human_download=true