Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_000520055.1_00025	espX1	type III secretion system effector EspX1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	473	473	100.00	94.29	473	ADD54679.1	type III secretion system effector EspX1	NA	NA
GCA_000520055.1_00821	cif	type III secretion system effector Cif	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	275	282	97.16	99.27	274	AAQ07241.1	type III secretion system effector Cif	NA	NA
GCA_000520055.1_00826	espJ	type III secretion system effector ADP-ribosyltransferase EspJ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	217	217	100.00	99.54	217	BAF96525.1	type III secretion system effector ADP-ribosyltransferase EspJ	NA	NA
GCA_000520055.1_01106	tccP	Tir-cytoskeleton coupling protein TccP2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	99.20	250	BAI31154.1	Tir-cytoskeleton coupling protein TccP2	NA	NA
GCA_000520055.1_01240	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	99.35	155	AAC44736.1	tellurium resistance protein TerW	NA	NA
GCA_000520055.1_01247	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	98.96	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA
GCA_000520055.1_01251	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.31	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA
GCA_000520055.1_01255	iha	bifunctional siderophore receptor/adhesin Iha	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	696	696	100.00	100.00	696	AAG55323.1	bifunctional siderophore receptor/adhesin Iha	NA	NA
GCA_000520055.1_01276	iucA	aerobactin synthase IucA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	574	576	100.00	98.61	576	EGI25746.1	aerobactin synthase IucA	NA	NA
GCA_000520055.1_01277	iucB	N(6)-hydroxylysine O-acetyltransferase IucB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	315	315	100.00	100.00	315	AAN82074.1	N(6)-hydroxylysine O-acetyltransferase IucB	NA	NA
GCA_000520055.1_01278	iucC	NIS family aerobactin synthetase IucC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	580	580	100.00	100.00	580	AAN82073.1	NIS family aerobactin synthetase IucC	NA	NA
GCA_000520055.1_01279	iucD	NADPH-dependent L-lysine N(6)-monooxygenase IucD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	445	445	100.00	98.88	445	AAD44749.1	NADPH-dependent L-lysine N(6)-monooxygenase IucD	NA	NA
GCA_000520055.1_01280	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	731	731	100.00	99.18	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA
GCA_000520055.1_01465	espK	type III secretion system effector EspK	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	453	453	100.00	100.00	453	BAB34991.1	type III secretion system effector EspK	NA	NA
GCA_000520055.1_01499	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA
GCA_000520055.1_01951	nleC	type III secretion system effector zinc metalloprotease NleC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	328	100.00	99.70	328	BAI25473.1	type III secretion system effector zinc metalloprotease NleC	NA	NA
GCA_000520055.1_02031	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	98.04	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr
GCA_000520055.1_02325	nleC	type III secretion system effector zinc metalloprotease NleC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	328	100.00	99.70	328	BAI36256.1	type III secretion system effector zinc metalloprotease NleC	NA	NA
GCA_000520055.1_02359	stxB2	Shiga toxin Stx2a subunit B	plus	VIRULENCE	VIRULENCE	STX2	stxB2a	EXACTP	89	89	100.00	100.00	89	AAM90978.1	Shiga toxin Stx2a subunit B	NF033660.0	Shiga toxin Stx2 subunit B
GCA_000520055.1_02360	stxA2	Shiga toxin Stx2 subunit A	plus	VIRULENCE	VIRULENCE	STX2	stxA2	EXACTP	319	319	100.00	100.00	319	GDR53740.1	Shiga toxin Stx2 subunit A	NF041702.1	Shiga toxin Stx2 subunit A
GCA_000520055.1_02511	nleB2	type III secretion system effector arginine glycosyltransferase NleB2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	326	326	100.00	100.00	326	CAS08589.1	type III secretion system effector arginine glycosyltransferase NleB2	NA	NA
GCA_000520055.1_02827	nleA	type III secretion system effector NleA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	411	413	100.00	95.16	413	CAM11324.1	type III secretion system effector NleA	NA	NA
GCA_000520055.1_03274	sinH	intimin-like inverse autotransporter SinH	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	726	730	99.86	74.38	730	AAL21411.1	intimin-like inverse autotransporter SinH	NF033423.1	intimin-like inverse autotransporter SinH
GCA_000520055.1_04111	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.71	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA
GCA_000520055.1_04368	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	91.49	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase
GCA_000520055.1_04430	lpfA1	long polar fimbria major subunit LpfA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	174	178	97.75	98.28	174	OPH66324.1	long polar fimbria major subunit LpfA1	NA	NA
GCA_000520055.1_04556	espF	type III secretion system LEE effector EspF	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	201	254	80.71	93.66	205	ADD58872.1	type III secretion system LEE effector EspF	NF040807.1	type III secretion system LEE effector EspF
GCA_000520055.1_04560	espB	type III secretion system LEE translocon pore-forming subunit EspB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AAG58818.1	type III secretion system LEE translocon pore-forming subunit EspB	NA	NA
GCA_000520055.1_04562	espA	type III secretion system LEE translocon filament protein EspA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	192	192	100.00	100.00	192	ACG59676.1	type III secretion system LEE translocon filament protein EspA	NA	NA
GCA_000520055.1_04565	eae	intimin type gamma	plus	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	EXACTP	934	934	100.00	100.00	934	ACM67148.1	intimin type gamma	NF033627.3	intimin
GCA_000520055.1_04567	tir	type III secretion system LEE translocated intimin receptor Tir	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	560	560	100.00	99.82	560	ACG59737.1	type III secretion system LEE translocated intimin receptor Tir	NF033637.1	type III secretion system LEE translocated intimin receptor Tir
GCA_000520055.1_04619	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA
GCA_000520055.1_04862	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA
GCA_000520055.1_05301	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	97.08	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase
GCA_000520055.1_05332	nleB	type III secretion system effector arginine glycosyltransferase NleB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAL57565.1	type III secretion system effector arginine glycosyltransferase NleB	NA	NA
GCA_000520055.1_05335	efa1	lymphostatin Efa1/LifA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3223	3223	100.00	99.94	3223	BAI32294.1	lymphostatin Efa1/LifA	NA	NA
GCA_000520055.1_05400	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	98.04	409	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA
GCA_000520055.1_05550	etpD	variant type II secretion system secretin EtpD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	656	656	100.00	99.70	656	BAI33940.1	variant type II secretion system secretin EtpD	NA	NA
GCA_000520055.1_05659	ehxA	enterohemolysin EhxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	998	998	100.00	100.00	998	ADZ45128.1	enterohemolysin EhxA	NA	NA