Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_011604725.1_00029	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA
GCA_011604725.1_00799	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA
GCA_011604725.1_00802	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA
GCA_011604725.1_00803	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.49	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA
GCA_011604725.1_02843	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.62	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB
GCA_011604725.1_03202	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.80	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA
GCA_011604725.1_03743	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA
GCA_011604725.1_03744	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD
GCA_011604725.1_03745	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	99.14	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA
GCA_011604725.1_03746	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.14	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA
GCA_011604725.1_03747	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	97.87	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase
GCA_011604725.1_04179	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	95.68	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase
GCA_011604725.1_04622	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA
GCA_011604725.1_04825	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase
GCA_011604725.1_04826	aph(3'')-Ib	aminoglycoside O-phosphotransferase APH(3'')-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA
GCA_011604725.1_04832	mph(A)	Mph(A) family macrolide 2'-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2'-phosphotransferase	NF000254.1	Mph(A) family macrolide 2'-phosphotransferase
GCA_011604725.1_04840	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1
GCA_011604725.1_04841	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE
GCA_011604725.1_04842	catB2	type B-2 chloramphenicol O-acetyltransferase CatB2	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_012477387.1	type B-2 chloramphenicol O-acetyltransferase CatB2	NF000490.1	type B chloramphenicol O-acetyltransferase
GCA_011604725.1_04843	aadA1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206317.1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1
GCA_011604725.1_04845	aac(6')-Ib	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	208	184	100.00	99.46	184	WP_003159191.1	aminoglycoside N-acetyltransferase AAC(6')-Ib4	NF033074.0	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
GCA_011604725.1_04846	blaVIM-1	subclass B1 metallo-beta-lactamase VIM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	266	266	100.00	100.00	266	WP_013263789.1	subclass B1 metallo-beta-lactamase VIM-1	NF012100.0	VIM family subclass B1 metallo-beta-lactamase
GCA_011604725.1_04860	qnrS1	quinolone resistance pentapeptide repeat protein QnrS1	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	218	218	100.00	100.00	218	WP_001516695.1	quinolone resistance pentapeptide repeat protein QnrS1	NF000056.3	QnrS family quinolone resistance pentapeptide repeat protein
GCA_011604725.1_04865	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1
GCA_011604725.1_04866	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE
GCA_011604725.1_04867	dfrA16	trimethoprim-resistant dihydrofolate reductase DfrA16	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	PARTIALP	83	157	52.87	100.00	83	WP_032490158.1	trimethoprim-resistant dihydrofolate reductase DfrA16	NA	NA
GCA_011604725.1_05151	terB	tellurium resistance membrane protein TerB	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	151	151	100.00	93.38	151	ACI12150.1	tellurium resistance membrane protein TerB	NA	NA
GCA_011604725.1_05152	terC	tellurium resistance membrane protein TerC	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	346	346	100.00	95.09	346	AAA98291.1	tellurium resistance membrane protein TerC	NA	NA
GCA_011604725.1_05153	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	94.79	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA
GCA_011604725.1_05185	terB	tellurium resistance membrane protein TerB	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	151	151	100.00	100.00	151	ACI12150.1	tellurium resistance membrane protein TerB	NA	NA
GCA_011604725.1_05186	terC	tellurium resistance membrane protein TerC	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	346	346	100.00	99.13	346	AAA98291.1	tellurium resistance membrane protein TerC	NA	NA
GCA_011604725.1_05187	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	98.96	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA
GCA_011604725.1_05188	terE	tellurium resistance cAMP binding protein TerE	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	191	191	100.00	99.48	191	AAA98293.1	tellurium resistance cAMP binding protein TerE	NA	NA