Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_013726395.1_00449	blaACT-55	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_047052637.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase
GCA_013726395.1_01471	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.14	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase
GCA_013726395.1_02006	ncrY	nickel resistance OB fold protein NcrY	plus	STRESS	METAL	NICKEL	NICKEL	PARTIALP	129	140	84.29	100.00	118	ABF61437.1	nickel resistance OB fold protein NcrY	NA	NA
GCA_013726395.1_02007	ncrC	Ni(II)/Co(II) efflux transporter permease subunit NcrC	plus	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	EXACTP	376	376	100.00	100.00	376	ADF64798.1	Ni(II)/Co(II) efflux transporter permease subunit NcrC	NA	NA
GCA_013726395.1_02008	ncrB	nickel-sensing transcriptional repressor NcrB	plus	STRESS	METAL	NICKEL	NICKEL	EXACTP	89	89	100.00	100.00	89	ABF61435.1	nickel-sensing transcriptional repressor NcrB	NA	NA
GCA_013726395.1_02009	ncrA	Metal Resistance	plus	STRESS	METAL	NICKEL	NICKEL	EXACTP	432	432	100.00	100.00	432	ABF61434.1	Metal Resistance	NA	NA
GCA_013726395.1_02144	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr
GCA_013726395.1_02159	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	65.37	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase
GCA_013726395.1_03275	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.38	1050	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB
GCA_013726395.1_04414	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA
GCA_013726395.1_04415	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA
GCA_013726395.1_04416	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA
GCA_013726395.1_04417	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA
GCA_013726395.1_04418	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA
GCA_013726395.1_04419	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA
GCA_013726395.1_04420	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA
GCA_013726395.1_04424	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA
GCA_013726395.1_04426	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA
GCA_013726395.1_04427	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA
GCA_013726395.1_04428	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA
GCA_013726395.1_04429	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA
GCA_013726395.1_04430	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	98.23	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA
GCA_013726395.1_04431	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	97.56	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA
GCA_013726395.1_04432	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA
GCA_013726395.1_04594	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	90.41	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA
GCA_013726395.1_04735	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA
GCA_013726395.1_04736	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	99.16	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK
GCA_013726395.1_04738	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	99.34	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA
GCA_013726395.1_04739	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.34	304	APX31172.1	heat resistance protein YfdX1	NA	NA
GCA_013726395.1_04740	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.98	295	ASF80766.1	heat resistance protein YfdX2	NA	NA
GCA_013726395.1_04741	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	213	203	100.00	96.06	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA
GCA_013726395.1_04743	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	EXACTP	146	146	100.00	100.00	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA
GCA_013726395.1_04744	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	569	571	99.65	99.12	569	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA
GCA_013726395.1_04745	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	95.15	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA