Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_1100	138	284	0.0067	12.2	669006	669419	GCA_000006625.1|AF222894.1	1100	0.21014492753623187	0.1056338028169014	-1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_1188	299	284	0.00077	15.3	714655	715551	GCA_000006625.1|AF222894.1	1188	0.2809364548494983	0.2887323943661972	-1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_129	239	284	0.00029	16.7	75847	76563	GCA_000006625.1|AF222894.1	129	0.3682008368200837	0.31690140845070425	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_143	292	284	0.00018	17.4	84472	85347	GCA_000006625.1|AF222894.1	143	0.2568493150684932	0.2605633802816901	-1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_191	237	284	0.0071	12.1	114559	115269	GCA_000006625.1|AF222894.1	191	0.31223628691983124	0.25704225352112675	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_239	297	284	4.3e-05	19.4	153976	154866	GCA_000006625.1|AF222894.1	239	0.36363636363636365	0.35563380281690143	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_380	409	284	0.00081	15.2	238563	239789	GCA_000006625.1|AF222894.1	380	0.06845965770171149	0.09154929577464789	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_393	122	284	0.00061	15.6	245104	245469	GCA_000006625.1|AF222894.1	393	0.3442622950819672	0.14084507042253522	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_756	331	284	0.00053	15.8	447158	448150	GCA_000006625.1|AF222894.1	756	0.18731117824773413	0.2147887323943662	1
AbiEii_0_CAS-III	GCA_000006625.1|AF222894.1_846	119	284	2.1e-06	23.7	496464	496820	GCA_000006625.1|AF222894.1	846	0.37815126050420167	0.176056338028169	1
AbiEii_1_CAS-III-A	GCA_000006625.1|AF222894.1_220	202	335	0.00053	15.4	136791	137396	GCA_000006625.1|AF222894.1	220	0.6485148514851485	0.3611940298507463	1
AbiEii_1_CAS-III-A	GCA_000006625.1|AF222894.1_393	122	335	0.0089	11.4	245104	245469	GCA_000006625.1|AF222894.1	393	0.26229508196721313	0.0955223880597015	1
AbiEii_1_CAS-III-A	GCA_000006625.1|AF222894.1_846	119	335	0.0094	11.3	496464	496820	GCA_000006625.1|AF222894.1	846	0.37815126050420167	0.12835820895522387	1
AbiEii_1_CAS-III-A	GCA_000006625.1|AF222894.1_862	250	335	4.7	2.4	505751	506500	GCA_000006625.1|AF222894.1	862	0.468	0.2656716417910448	-1
AbiEii_1_CAS-III-A	GCA_000006625.1|AF222894.1_924	250	335	3.9	2.7	545095	545844	GCA_000006625.1|AF222894.1	924	0.548	0.2656716417910448	-1
Cas12a_M58_0_V-A	GCA_000006625.1|AF222894.1_947	98	1236	0.015	8.9	559297	559590	GCA_000006625.1|AF222894.1	947	0.45918367346938777	0.03559870550161812	1
Cas12f2_1_CAS-V-F	GCA_000006625.1|AF222894.1_808	172	422	0.0063	11.8	476249	476764	GCA_000006625.1|AF222894.1	808	0.19186046511627908	0.07582938388625593	-1
Cas1_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_319	109	317	0.0017	13.6	201180	201506	GCA_000006625.1|AF222894.1	319	0.5229357798165137	0.17981072555205047	-1
Cas1_0_I-II-III	GCA_000006625.1|AF222894.1_319	109	327	0.00047	15.5	201180	201506	GCA_000006625.1|AF222894.1	319	0.5045871559633027	0.18042813455657492	-1
Cas1_1_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_319	109	261	0.00048	15.7	201180	201506	GCA_000006625.1|AF222894.1	319	0.47706422018348627	0.20689655172413793	-1
Cas2_4_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_861	105	89	0.0011	15.5	504656	504970	GCA_000006625.1|AF222894.1	861	0.6	0.5393258426966292	-1
Cas2_6_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_845	102	90	0.0034	14.0	495857	496162	GCA_000006625.1|AF222894.1	845	0.5	0.5222222222222223	-1
Cas3HD_0_CAS-I	GCA_000006625.1|AF222894.1_175	474	203	8.2e-06	22.0	103244	104665	GCA_000006625.1|AF222894.1	175	0.15822784810126583	0.3497536945812808	1
Cas3_0_CAS-I	GCA_000006625.1|AF222894.1_1214	195	353	3.8e-08	29.0	728474	729058	GCA_000006625.1|AF222894.1	1214	0.8923076923076924	0.5297450424929179	-1
Cas3_0_CAS-I	GCA_000006625.1|AF222894.1_764	429	353	0.063	8.5	452235	453521	GCA_000006625.1|AF222894.1	764	0.4149184149184149	0.3314447592067989	1
Cas3_0_CAS-I-D	GCA_000006625.1|AF222894.1_1214	195	626	6.7e-05	17.4	728474	729058	GCA_000006625.1|AF222894.1	1214	0.5128205128205128	0.15175718849840256	-1
Cas3_0_I	GCA_000006625.1|AF222894.1_1214	195	358	2.2e-08	29.7	728474	729058	GCA_000006625.1|AF222894.1	1214	0.8666666666666667	0.5111731843575419	-1
Cas3_0_ID	GCA_000006625.1|AF222894.1_1214	195	357	1.9e-05	20.1	728474	729058	GCA_000006625.1|AF222894.1	1214	0.49743589743589745	0.2605042016806723	-1
Cas3_1_CAS-I	GCA_000006625.1|AF222894.1_1214	195	745	3.5e-08	28.4	728474	729058	GCA_000006625.1|AF222894.1	1214	0.8717948717948718	0.2550335570469799	-1
Cas3_1_CAS-I-D	GCA_000006625.1|AF222894.1_1214	195	353	1.4e-06	23.8	728474	729058	GCA_000006625.1|AF222894.1	1214	0.49230769230769234	0.26062322946175637	-1
Cas3_1_I	GCA_000006625.1|AF222894.1_175	474	178	0.00011	18.5	103244	104665	GCA_000006625.1|AF222894.1	175	0.07805907172995781	0.24719101123595505	1
Cas3_2_CAS-I	GCA_000006625.1|AF222894.1_1214	195	967	0.00029	15.2	728474	729058	GCA_000006625.1|AF222894.1	1214	0.49230769230769234	0.09617373319544985	-1
Cas4_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_340	387	179	0.00027	17.4	212844	214004	GCA_000006625.1|AF222894.1	340	0.3152454780361757	0.7094972067039106	-1
Cas4_5_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_340	387	161	0.0013	15.1	212844	214004	GCA_000006625.1|AF222894.1	340	0.2222222222222222	0.5341614906832298	-1
Cas5_3_CAS-I-B	GCA_000006625.1|AF222894.1_560	665	174	0.006	12.7	330611	332605	GCA_000006625.1|AF222894.1	560	0.22255639097744362	0.5172413793103449	1
Cas8b2_7_CAS-I-B	GCA_000006625.1|AF222894.1_98	71	489	0.00017	16.9	59271	59483	GCA_000006625.1|AF222894.1	98	0.5915492957746479	0.08588957055214724	1
Cas8b9_0_CAS-I-B	GCA_000006625.1|AF222894.1_413	73	465	0.00063	15.0	256118	256336	GCA_000006625.1|AF222894.1	413	0.6986301369863014	0.10752688172043011	1
Cas9_0_II-C2	GCA_000006625.1|AF222894.1_308	53	967	0.0063	10.8	193934	194092	GCA_000006625.1|AF222894.1	308	0.6981132075471698	0.03619441571871768	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_284	227	198	0.00023	17.1	181906	182586	GCA_000006625.1|AF222894.1	284	0.3876651982378855	0.42424242424242425	1
CasR_0_CAS-III-B-III-D	GCA_000006625.1|AF222894.1_1167	74	255	0.0027	13.5	704028	704249	GCA_000006625.1|AF222894.1	1167	0.8378378378378378	0.27450980392156865	-1
CasR_0_CAS-III-B-III-D	GCA_000006625.1|AF222894.1_602	184	255	0.0042	12.8	361784	362335	GCA_000006625.1|AF222894.1	602	0.31521739130434784	0.23529411764705882	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_284	227	218	1.6e-05	20.4	181906	182586	GCA_000006625.1|AF222894.1	284	0.3700440528634361	0.3669724770642202	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_66	120	218	0.00068	15.1	41341	41700	GCA_000006625.1|AF222894.1	66	0.44166666666666665	0.24311926605504589	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_853	59	218	0.012	11.0	501201	501377	GCA_000006625.1|AF222894.1	853	0.576271186440678	0.1559633027522936	-1
Cmr5gr11_1_CAS-III-C	GCA_000006625.1|AF222894.1_319	109	180	0.043	9.8	201180	201506	GCA_000006625.1|AF222894.1	319	0.8899082568807339	0.5111111111111111	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_66	120	118	0.0075	12.9	41341	41700	GCA_000006625.1|AF222894.1	66	0.4	0.4406779661016949	1
Csf4_0_IVA	GCA_000006625.1|AF222894.1_1214	195	666	7.7e-11	37.4	728474	729058	GCA_000006625.1|AF222894.1	1214	0.3641025641025641	0.1066066066066066	-1
Csf4_1_IVA1	GCA_000006625.1|AF222894.1_1214	195	802	0.002	12.5	728474	729058	GCA_000006625.1|AF222894.1	1214	0.4666666666666667	0.11346633416458853	-1
Csf4_1_IVA1	GCA_000006625.1|AF222894.1_178	136	802	0.013	9.9	105760	106167	GCA_000006625.1|AF222894.1	178	0.3897058823529412	0.05486284289276808	1
Csm2gr11_4_CAS-III-D	GCA_000006625.1|AF222894.1_749	146	130	0.0025	13.9	443158	443595	GCA_000006625.1|AF222894.1	749	0.5205479452054794	0.5461538461538461	1
Csm6_2_CAS-III	GCA_000006625.1|AF222894.1_556	203	184	0.00099	14.7	327959	328567	GCA_000006625.1|AF222894.1	556	0.541871921182266	0.6086956521739131	1
Csn2_10_CAS-II-A	GCA_000006625.1|AF222894.1_210	543	321	0.0033	12.8	128907	130535	GCA_000006625.1|AF222894.1	210	0.2523020257826888	0.21806853582554517	1
Csn2_13_CAS-II-A	GCA_000006625.1|AF222894.1_1064	185	180	0.0062	12.4	647871	648425	GCA_000006625.1|AF222894.1	1064	0.20540540540540542	0.2111111111111111	-1
Csn2_1_CAS-II-A	GCA_000006625.1|AF222894.1_758	76	218	0.00079	15.3	449069	449296	GCA_000006625.1|AF222894.1	758	0.631578947368421	0.22018348623853212	1
Csx19_14_CAS-III-D	GCA_000006625.1|AF222894.1_1005	680	163	0.12	8.6	608954	610993	GCA_000006625.1|AF222894.1	1005	0.22647058823529412	0.39263803680981596	-1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_184	160	277	0.0022	13.4	111214	111693	GCA_000006625.1|AF222894.1	184	0.71875	0.3935018050541516	1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_29	439	277	0.0015	13.9	18354	19670	GCA_000006625.1|AF222894.1	29	0.0888382687927107	0.1299638989169675	-1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_419	274	277	0.0063	11.9	259600	260421	GCA_000006625.1|AF222894.1	419	0.14233576642335766	0.1407942238267148	1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_629	69	277	0.012	10.9	378508	378714	GCA_000006625.1|AF222894.1	629	0.42028985507246375	0.10469314079422383	-1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_656	470	277	0.00036	15.9	395989	397398	GCA_000006625.1|AF222894.1	656	0.07446808510638298	0.1263537906137184	1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_745	46	277	0.0079	11.5	441712	441849	GCA_000006625.1|AF222894.1	745	0.41304347826086957	0.06859205776173286	-1
Csx3_2_CAS-I-III	GCA_000006625.1|AF222894.1_846	119	277	0.011	11.0	496464	496820	GCA_000006625.1|AF222894.1	846	0.18487394957983194	0.07942238267148015	1
CysH_0_IVB	GCA_000006625.1|AF222894.1_785	90	249	0.0074	12.2	463163	463432	GCA_000006625.1|AF222894.1	785	0.4111111111111111	0.14859437751004015	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_232	376	160	5.7e-13	45.6	142985	144112	GCA_000006625.1|AF222894.1	232	0.42819148936170215	1.0	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_723	291	160	3e-26	88.7	430804	431676	GCA_000006625.1|AF222894.1	723	0.3436426116838488	0.61875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_724	80	160	5.5e-05	19.6	431716	431955	GCA_000006625.1|AF222894.1	724	0.475	0.2375	1
HTH_0_CAS-III-A	GCA_000006625.1|AF222894.1_175	474	364	0.03	9.6	103244	104665	GCA_000006625.1|AF222894.1	175	0.3059071729957806	0.40384615384615385	1
Mem_DnaJ_0_CAS-III-AM	GCA_000006625.1|AF222894.1_794	376	284	0.0011	14.5	468467	469594	GCA_000006625.1|AF222894.1	794	0.1356382978723404	0.20422535211267606	-1
RecD_0_IVD	GCA_000006625.1|AF222894.1_1098	119	763	0.003	11.9	668191	668547	GCA_000006625.1|AF222894.1	1098	0.48739495798319327	0.06684141546526867	-1
Unk_05_0_CAS-I-B	GCA_000006625.1|AF222894.1_770	67	195	0.0059	12.6	456308	456508	GCA_000006625.1|AF222894.1	770	0.6119402985074627	0.21025641025641026	-1
WYL_0_CAS-I-II-III-IV-V-VI	GCA_000006625.1|AF222894.1_66	120	313	5.8e-05	19.0	41341	41700	GCA_000006625.1|AF222894.1	66	0.39166666666666666	0.1501597444089457	1