Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_1118	308	284	1.3e-05	21.3	652201	653124	GCA_000143945.1|CP002077.1	1118	0.08441558441558442	0.09154929577464789	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_1380	195	284	0.0017	14.3	800564	801148	GCA_000143945.1|CP002077.1	1380	0.4512820512820513	0.29225352112676056	-1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_1389	222	284	4.9e-05	19.4	807245	807910	GCA_000143945.1|CP002077.1	1389	0.44144144144144143	0.3274647887323944	-1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_182	464	284	0.00013	17.9	100543	101934	GCA_000143945.1|CP002077.1	182	0.28448275862068967	0.44366197183098594	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_33	94	284	0.0022	14.0	22219	22500	GCA_000143945.1|CP002077.1	33	0.24468085106382978	0.07746478873239436	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_407	272	284	0.00024	17.1	231043	231858	GCA_000143945.1|CP002077.1	407	0.46691176470588236	0.47183098591549294	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_471	190	284	0.0026	13.7	269740	270309	GCA_000143945.1|CP002077.1	471	0.28421052631578947	0.18661971830985916	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_538	308	284	0.0016	14.4	306334	307257	GCA_000143945.1|CP002077.1	538	0.41883116883116883	0.45774647887323944	1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_890	150	284	8.4e-05	18.6	512234	512683	GCA_000143945.1|CP002077.1	890	0.18666666666666668	0.09859154929577464	-1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_899	310	284	4.7e-07	26.0	517965	518894	GCA_000143945.1|CP002077.1	899	0.3419354838709677	0.3591549295774648	-1
AbiEii_0_CAS-III	GCA_000143945.1|CP002077.1_900	237	284	0.00019	17.4	519110	519820	GCA_000143945.1|CP002077.1	900	0.39662447257383965	0.31338028169014087	-1
AbiEii_1_CAS-III-A	GCA_000143945.1|CP002077.1_1237	123	335	0.00078	15.0	723992	724360	GCA_000143945.1|CP002077.1	1237	0.5447154471544715	0.1880597014925373	-1
AbiEii_1_CAS-III-A	GCA_000143945.1|CP002077.1_890	150	335	0.0099	11.4	512234	512683	GCA_000143945.1|CP002077.1	890	0.24666666666666667	0.10746268656716418	-1
Cas11_1_IV	GCA_000143945.1|CP002077.1_16	87	122	0.0059	13.3	12377	12637	GCA_000143945.1|CP002077.1	16	0.7586206896551724	0.5163934426229508	1
Cas3HD_0_CAS-I	GCA_000143945.1|CP002077.1_1370	377	203	0.0013	14.9	795575	796705	GCA_000143945.1|CP002077.1	1370	0.21220159151193635	0.41379310344827586	-1
Cas3HD_0_CAS-I	GCA_000143945.1|CP002077.1_560	438	203	2.5e-06	23.8	318020	319333	GCA_000143945.1|CP002077.1	560	0.3904109589041096	0.812807881773399	1
Cas3HD_0_CAS-I	GCA_000143945.1|CP002077.1_692	116	203	0.003	13.7	396961	397308	GCA_000143945.1|CP002077.1	692	0.3103448275862069	0.21674876847290642	-1
Cas3_0_CAS-I	GCA_000143945.1|CP002077.1_1275	114	353	0.00012	17.6	744526	744867	GCA_000143945.1|CP002077.1	1275	0.5263157894736842	0.16147308781869688	1
Cas3_0_CAS-I	GCA_000143945.1|CP002077.1_928	152	353	0.00021	16.8	535336	535791	GCA_000143945.1|CP002077.1	928	0.6513157894736842	0.2719546742209632	-1
Cas3_0_I	GCA_000143945.1|CP002077.1_1118	308	358	0.01	11.2	652201	653124	GCA_000143945.1|CP002077.1	1118	0.38636363636363635	0.329608938547486	1
Cas3_0_I	GCA_000143945.1|CP002077.1_1275	114	358	0.0023	13.4	744526	744867	GCA_000143945.1|CP002077.1	1275	0.4649122807017544	0.13966480446927373	1
Cas3_0_I	GCA_000143945.1|CP002077.1_928	152	358	0.00014	17.4	535336	535791	GCA_000143945.1|CP002077.1	928	0.631578947368421	0.25977653631284914	-1
Cas3_0_ID	GCA_000143945.1|CP002077.1_1275	114	357	0.004	12.6	744526	744867	GCA_000143945.1|CP002077.1	1275	0.4649122807017544	0.13445378151260504	1
Cas3_1_CAS-I	GCA_000143945.1|CP002077.1_1275	114	745	5.1e-07	24.7	744526	744867	GCA_000143945.1|CP002077.1	1275	0.5614035087719298	0.08456375838926175	1
Cas3_1_CAS-I	GCA_000143945.1|CP002077.1_928	152	745	0.00062	14.5	535336	535791	GCA_000143945.1|CP002077.1	928	0.26973684210526316	0.05771812080536913	-1
Cas3_1_CAS-I-D	GCA_000143945.1|CP002077.1_1275	114	353	0.00073	15.0	744526	744867	GCA_000143945.1|CP002077.1	1275	0.49122807017543857	0.14447592067988668	1
Cas3_1_I	GCA_000143945.1|CP002077.1_1370	377	178	0.0019	14.6	795575	796705	GCA_000143945.1|CP002077.1	1370	0.3076923076923077	0.5337078651685393	-1
Cas3_1_I	GCA_000143945.1|CP002077.1_560	438	178	0.0053	13.1	318020	319333	GCA_000143945.1|CP002077.1	560	0.271689497716895	0.8089887640449438	1
Cas3_2_CAS-I	GCA_000143945.1|CP002077.1_1275	114	967	0.0011	13.4	744526	744867	GCA_000143945.1|CP002077.1	1275	0.7280701754385965	0.0827300930713547	1
Cas3d_1_CAS-I-D	GCA_000143945.1|CP002077.1_1275	114	627	0.0025	12.4	744526	744867	GCA_000143945.1|CP002077.1	1275	0.45614035087719296	0.0685805422647528	1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_1359	346	210	0.0042	13.5	787405	788442	GCA_000143945.1|CP002077.1	1359	0.2832369942196532	0.45714285714285713	-1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_984	170	210	0.0031	13.9	576157	576666	GCA_000143945.1|CP002077.1	984	0.5294117647058824	0.3952380952380952	-1
Cas6f_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_1199	121	186	0.0023	14.2	700264	700626	GCA_000143945.1|CP002077.1	1199	0.6611570247933884	0.41935483870967744	-1
Cas7_0_CAS-I-C	GCA_000143945.1|CP002077.1_618	150	268	0.0057	12.5	350253	350702	GCA_000143945.1|CP002077.1	618	0.4066666666666667	0.22761194029850745	1
Cas7_1_CAS-I-E	GCA_000143945.1|CP002077.1_223	128	359	0.023	10.4	129606	129989	GCA_000143945.1|CP002077.1	223	0.6015625	0.19220055710306408	1
Cas7_1_CAS-I-E	GCA_000143945.1|CP002077.1_970	121	359	0.012	11.4	563507	563869	GCA_000143945.1|CP002077.1	970	0.7024793388429752	0.233983286908078	1
Cas7_3_IB	GCA_000143945.1|CP002077.1_618	150	268	0.0036	13.2	350253	350702	GCA_000143945.1|CP002077.1	618	0.6	0.3358208955223881	1
Cas9_0_II-C2	GCA_000143945.1|CP002077.1_391	61	967	0.049	8.0	223133	223315	GCA_000143945.1|CP002077.1	391	0.8360655737704918	0.045501551189245086	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_1118	308	198	0.0028	13.6	652201	653124	GCA_000143945.1|CP002077.1	1118	0.17857142857142858	0.2727272727272727	1
CasR_0_CAS-III-B-III-D	GCA_000143945.1|CP002077.1_947	107	255	0.00055	15.9	548062	548382	GCA_000143945.1|CP002077.1	947	0.6822429906542056	0.2980392156862745	-1
CasR_0_CAS-III-B-III-D	GCA_000143945.1|CP002077.1_955	174	255	0.2	7.5	552685	553206	GCA_000143945.1|CP002077.1	955	0.7126436781609196	0.26666666666666666	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_1118	308	218	0.00099	14.7	652201	653124	GCA_000143945.1|CP002077.1	1118	0.2987012987012987	0.2706422018348624	1
Cmr1gr7_5_CAS-III-B-III-C	GCA_000143945.1|CP002077.1_1227	125	340	0.0068	12.3	718578	718952	GCA_000143945.1|CP002077.1	1227	0.688	0.25882352941176473	-1
Cmr5gr11_10_CAS-III-B	GCA_000143945.1|CP002077.1_437	93	146	0.0013	15.2	246070	246348	GCA_000143945.1|CP002077.1	437	0.4946236559139785	0.3150684931506849	1
Cmr5gr11_10_CAS-III-B	GCA_000143945.1|CP002077.1_854	93	146	0.00096	15.6	493003	493281	GCA_000143945.1|CP002077.1	854	0.5161290322580645	0.3287671232876712	1
Cmr5gr11_2_CAS-III-B	GCA_000143945.1|CP002077.1_249	56	138	0.0036	13.9	144399	144566	GCA_000143945.1|CP002077.1	249	0.8392857142857143	0.34057971014492755	1
Cmr5gr11_3_CAS-III-B	GCA_000143945.1|CP002077.1_1274	87	119	0.0048	13.7	744108	744368	GCA_000143945.1|CP002077.1	1274	0.4827586206896552	0.35294117647058826	-1
CorA_1_CAS-III-B	GCA_000143945.1|CP002077.1_758	125	125	0.0014	14.9	437526	437900	GCA_000143945.1|CP002077.1	758	0.376	0.384	1
Csc2_0_ID	GCA_000143945.1|CP002077.1_1145	87	282	0.0028	13.3	667776	668036	GCA_000143945.1|CP002077.1	1145	0.4367816091954023	0.1347517730496454	-1
Csf2_1_IVA3	GCA_000143945.1|CP002077.1_1227	125	263	0.27	6.8	718578	718952	GCA_000143945.1|CP002077.1	1227	0.528	0.24714828897338403	-1
Csf2_1_IVA3	GCA_000143945.1|CP002077.1_682	454	263	0.0022	13.6	389676	391037	GCA_000143945.1|CP002077.1	682	0.21365638766519823	0.376425855513308	1
Csf4_0_IVA	GCA_000143945.1|CP002077.1_1275	114	666	0.0023	12.9	744526	744867	GCA_000143945.1|CP002077.1	1275	0.4473684210526316	0.07207207207207207	1
Csf4_0_IVA	GCA_000143945.1|CP002077.1_928	152	666	1e-06	23.9	535336	535791	GCA_000143945.1|CP002077.1	928	0.4276315789473684	0.0960960960960961	-1
Csm4gr5_0_CAS-III-A-III-D	GCA_000143945.1|CP002077.1_88	279	317	0.065	8.8	49709	50545	GCA_000143945.1|CP002077.1	88	0.20430107526881722	0.1829652996845426	1
Csn2_1_CAS-II-A	GCA_000143945.1|CP002077.1_651	358	218	0.0022	14.0	369261	370334	GCA_000143945.1|CP002077.1	651	0.25977653631284914	0.24311926605504589	1
Csn2_7_CAS-II-A	GCA_000143945.1|CP002077.1_407	272	372	0.0044	12.4	231043	231858	GCA_000143945.1|CP002077.1	407	0.16911764705882354	0.12365591397849462	1
Csn2_7_CAS-II-A	GCA_000143945.1|CP002077.1_865	84	372	0.00081	14.8	499085	499336	GCA_000143945.1|CP002077.1	865	0.6428571428571429	0.1478494623655914	1
Csx19_8_CAS-III-D	GCA_000143945.1|CP002077.1_1044	78	148	0.0031	14.2	607587	607820	GCA_000143945.1|CP002077.1	1044	0.6282051282051282	0.3108108108108108	1
Csx1_13_CAS-III	GCA_000143945.1|CP002077.1_300	190	426	0.0017	13.7	173380	173949	GCA_000143945.1|CP002077.1	300	0.3631578947368421	0.15258215962441316	1
Csx1_6_CAS-III	GCA_000143945.1|CP002077.1_780	75	406	0.00098	14.7	451566	451790	GCA_000143945.1|CP002077.1	780	0.6	0.09852216748768473	1
Csx3_2_CAS-I-III	GCA_000143945.1|CP002077.1_1163	389	277	0.00059	15.3	677906	679072	GCA_000143945.1|CP002077.1	1163	0.10025706940874037	0.1407942238267148	-1
Csx3_2_CAS-I-III	GCA_000143945.1|CP002077.1_682	454	277	0.00032	16.2	389676	391037	GCA_000143945.1|CP002077.1	682	0.08590308370044053	0.13357400722021662	1
Csx3_2_CAS-I-III	GCA_000143945.1|CP002077.1_982	300	277	3e-05	19.6	574576	575475	GCA_000143945.1|CP002077.1	982	0.2833333333333333	0.22743682310469315	-1
CysH_0_IVB	GCA_000143945.1|CP002077.1_884	89	249	0.0061	12.6	507738	508004	GCA_000143945.1|CP002077.1	884	0.4157303370786517	0.14859437751004015	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_68	264	160	1.8e-17	60.3	38861	39652	GCA_000143945.1|CP002077.1	68	0.29924242424242425	0.4875	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000143945.1|CP002077.1_69	154	160	3.8e-15	52.8	39668	40129	GCA_000143945.1|CP002077.1	69	0.474025974025974	0.4625	-1
Mem_DnaJ_0_CAS-III-AM	GCA_000143945.1|CP002077.1_42	391	284	1.6e-08	30.6	26146	27318	GCA_000143945.1|CP002077.1	42	0.15601023017902813	0.2147887323943662	1
NYN_0_CAS-III-B	GCA_000143945.1|CP002077.1_389	112	320	0.15	7.5	222251	222586	GCA_000143945.1|CP002077.1	389	0.6607142857142857	0.228125	1
RecD_0_IVD	GCA_000143945.1|CP002077.1_1262	596	763	6.3e-05	17.6	735233	737020	GCA_000143945.1|CP002077.1	1262	0.18120805369127516	0.14154652686762778	-1
RecD_0_IVD	GCA_000143945.1|CP002077.1_1275	114	763	2.8e-05	18.7	744526	744867	GCA_000143945.1|CP002077.1	1275	0.6491228070175439	0.0891218872870249	1
RecD_0_IVD	GCA_000143945.1|CP002077.1_518	74	763	0.0053	11.2	296077	296298	GCA_000143945.1|CP002077.1	518	0.4189189189189189	0.039318479685452164	1
RecD_0_IVD	GCA_000143945.1|CP002077.1_703	506	763	3.8e-09	31.5	402242	403759	GCA_000143945.1|CP002077.1	703	0.41699604743083	0.2516382699868938	1
RecD_0_IVD	GCA_000143945.1|CP002077.1_899	310	763	0.006	11.0	517965	518894	GCA_000143945.1|CP002077.1	899	0.08387096774193549	0.03407601572739188	-1
STAND_TPR_0_CAS-I-E	GCA_000143945.1|CP002077.1_1110	322	1210	0.0023	12.2	647668	648633	GCA_000143945.1|CP002077.1	1110	0.4813664596273292	0.128099173553719	-1