Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_115	1188	284	2e-05	20.1	114651	118214	GCA_000161975.1|GG688422.1	115	0.16835016835016836	0.4612676056338028	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_157	217	284	0.0002	16.8	160340	160990	GCA_000161975.1|GG688422.1	157	0.4055299539170507	0.3028169014084507	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_258	289	284	0.0019	13.6	280525	281391	GCA_000161975.1|GG688422.1	258	0.4013840830449827	0.397887323943662	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_259	279	284	4.2e-05	19.0	281376	282212	GCA_000161975.1|GG688422.1	259	0.43727598566308246	0.4225352112676056	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_297	472	284	3.1e-07	26.0	335458	336873	GCA_000161975.1|GG688422.1	297	0.3135593220338983	0.3873239436619718	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_359	239	284	5.1e-06	22.0	409151	409867	GCA_000161975.1|GG688422.1	359	0.4811715481171548	0.39436619718309857	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_383	233	284	3e-05	19.5	435667	436365	GCA_000161975.1|GG688422.1	383	0.6609442060085837	0.40492957746478875	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_4	945	284	0.0011	14.3	5898	8732	GCA_000161975.1|GG688422.1	4	0.1312169312169312	0.33098591549295775	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_44	232	284	0.001	14.4	54217	54912	GCA_000161975.1|GG688422.1	44	0.34051724137931033	0.2676056338028169	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_446	428	284	3.9e-05	19.1	513511	514794	GCA_000161975.1|GG688422.1	446	0.09579439252336448	0.13732394366197184	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_452	578	284	9.7e-07	24.4	528783	530516	GCA_000161975.1|GG688422.1	452	0.3944636678200692	0.6549295774647887	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_501	271	284	0.00079	14.8	580260	581072	GCA_000161975.1|GG688422.1	501	0.26199261992619927	0.24295774647887325	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_644	220	284	3e-05	19.5	743068	743727	GCA_000161975.1|GG688422.1	644	0.32272727272727275	0.24647887323943662	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_648	224	284	0.0009	14.6	747018	747689	GCA_000161975.1|GG688422.1	648	0.24553571428571427	0.19718309859154928	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_683	461	284	3.3e-08	29.2	800548	801930	GCA_000161975.1|GG688422.1	683	0.36225596529284165	0.40492957746478875	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_746	253	284	9.5e-05	17.8	871818	872576	GCA_000161975.1|GG688422.1	746	0.4782608695652174	0.426056338028169	-1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_804	229	284	0.00063	15.1	934927	935613	GCA_000161975.1|GG688422.1	804	0.4410480349344978	0.33098591549295775	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_819	273	284	4.8e-05	18.8	947788	948606	GCA_000161975.1|GG688422.1	819	0.34798534798534797	0.30985915492957744	1
AbiEii_0_CAS-III	GCA_000161975.1|GG688422.1_922	412	284	0.00021	16.7	1062553	1063788	GCA_000161975.1|GG688422.1	922	0.050970873786407765	0.07394366197183098	1
AbiEii_1_CAS-III-A	GCA_000161975.1|GG688422.1_316	689	335	5.7e-05	18.1	350695	352761	GCA_000161975.1|GG688422.1	316	0.13062409288824384	0.2417910447761194	-1
AbiEii_1_CAS-III-A	GCA_000161975.1|GG688422.1_359	239	335	2.3e-05	19.4	409151	409867	GCA_000161975.1|GG688422.1	359	0.3263598326359833	0.2417910447761194	-1
AbiEii_1_CAS-III-A	GCA_000161975.1|GG688422.1_804	229	335	8.1e-05	17.7	934927	935613	GCA_000161975.1|GG688422.1	804	0.3056768558951965	0.20298507462686566	1
Cas10_0_CAS-III	GCA_000161975.1|GG688422.1_472	108	511	0.052	8.1	550652	550975	GCA_000161975.1|GG688422.1	472	0.8703703703703703	0.1898238747553816	-1
Cas10_1_CAS-III	GCA_000161975.1|GG688422.1_857	62	654	0.0043	11.4	982795	982980	GCA_000161975.1|GG688422.1	857	0.7096774193548387	0.07033639143730887	1
Cas12f2_2_CAS-V-F	GCA_000161975.1|GG688422.1_774	249	493	0.37	5.1	905392	906138	GCA_000161975.1|GG688422.1	774	0.26506024096385544	0.07707910750507099	1
Cas12m_0_V-M	GCA_000161975.1|GG688422.1_469	188	577	0.038	8.2	547607	548170	GCA_000161975.1|GG688422.1	469	0.44148936170212766	0.1438474870017331	-1
Cas12m_0_V-M	GCA_000161975.1|GG688422.1_930	787	577	0.19	5.9	1072479	1074839	GCA_000161975.1|GG688422.1	930	0.12960609911054638	0.1733102253032929	1
Cas3HD_0_CAS-I	GCA_000161975.1|GG688422.1_165	514	203	3.3e-06	22.9	169681	171222	GCA_000161975.1|GG688422.1	165	0.08560311284046693	0.2561576354679803	1
Cas3HD_0_CAS-I	GCA_000161975.1|GG688422.1_523	332	203	0.00043	16.0	603300	604295	GCA_000161975.1|GG688422.1	523	0.1144578313253012	0.22660098522167488	-1
Cas3_0_CAS-I	GCA_000161975.1|GG688422.1_540	319	353	6.3e-06	21.3	621665	622621	GCA_000161975.1|GG688422.1	540	0.2006269592476489	0.1813031161473088	-1
Cas3_0_CAS-I	GCA_000161975.1|GG688422.1_836	1093	353	7.9e-06	20.9	965909	969187	GCA_000161975.1|GG688422.1	836	0.2131747483989021	0.603399433427762	1
Cas3_0_CAS-I	GCA_000161975.1|GG688422.1_893	676	353	5.1e-06	21.6	1029844	1031871	GCA_000161975.1|GG688422.1	893	0.13313609467455623	0.24362606232294617	1
Cas3_0_I	GCA_000161975.1|GG688422.1_540	319	358	1.4e-05	20.1	621665	622621	GCA_000161975.1|GG688422.1	540	0.19435736677115986	0.17318435754189945	-1
Cas3_0_I	GCA_000161975.1|GG688422.1_836	1093	358	0.00044	15.2	965909	969187	GCA_000161975.1|GG688422.1	836	0.24062214089661482	0.5335195530726257	1
Cas3_0_I	GCA_000161975.1|GG688422.1_893	676	358	5.3e-07	24.8	1029844	1031871	GCA_000161975.1|GG688422.1	893	0.1346153846153846	0.25977653631284914	1
Cas3_1_CAS-I	GCA_000161975.1|GG688422.1_836	1093	745	2.7e-07	25.0	965909	969187	GCA_000161975.1|GG688422.1	836	0.19762122598353157	0.29261744966442954	1
Cas3_1_CAS-I	GCA_000161975.1|GG688422.1_893	676	745	0.0007	13.8	1029844	1031871	GCA_000161975.1|GG688422.1	893	0.16863905325443787	0.16375838926174496	1
Cas3_1_I	GCA_000161975.1|GG688422.1_165	514	178	0.00098	15.0	169681	171222	GCA_000161975.1|GG688422.1	165	0.07587548638132295	0.25842696629213485	1
Cas3_1_I	GCA_000161975.1|GG688422.1_772	323	178	0.0056	12.5	902094	903062	GCA_000161975.1|GG688422.1	772	0.3498452012383901	0.6348314606741573	1
Cas4_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_176	1098	179	3.8e-07	26.3	181767	185060	GCA_000161975.1|GG688422.1	176	0.10018214936247723	0.5977653631284916	1
Cas4_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_271	1290	179	0.019	11.0	302253	306122	GCA_000161975.1|GG688422.1	271	0.07131782945736434	0.45251396648044695	-1
Cas4_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_59	377	179	1.6e-07	27.5	63323	64453	GCA_000161975.1|GG688422.1	59	0.3687002652519894	0.7821229050279329	1
Cas4_0_I-II	GCA_000161975.1|GG688422.1_176	1098	180	4.7e-08	28.8	181767	185060	GCA_000161975.1|GG688422.1	176	0.1366120218579235	0.6055555555555555	1
Cas4_0_I-II	GCA_000161975.1|GG688422.1_271	1290	180	0.0027	13.3	302253	306122	GCA_000161975.1|GG688422.1	271	0.07364341085271318	0.4722222222222222	-1
Cas4_0_I-II	GCA_000161975.1|GG688422.1_59	377	180	2.3e-06	23.3	63323	64453	GCA_000161975.1|GG688422.1	59	0.36074270557029176	0.7555555555555555	1
Cas4_0_I-II-V	GCA_000161975.1|GG688422.1_176	1098	177	0.00061	15.6	181767	185060	GCA_000161975.1|GG688422.1	176	0.16666666666666666	0.8700564971751412	1
Cas4_0_I-II-V	GCA_000161975.1|GG688422.1_59	377	177	5.3e-05	19.1	63323	64453	GCA_000161975.1|GG688422.1	59	0.3819628647214854	0.8248587570621468	1
Cas4_3_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_176	1098	197	0.052	9.4	181767	185060	GCA_000161975.1|GG688422.1	176	0.07741347905282331	0.350253807106599	1
Cas4_3_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_192	299	197	0.00098	15.0	207681	208577	GCA_000161975.1|GG688422.1	192	0.17391304347826086	0.26903553299492383	1
Cas4_5_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_176	1098	161	1.2e-06	24.5	181767	185060	GCA_000161975.1|GG688422.1	176	0.11930783242258652	0.7701863354037267	1
Cas4_5_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_192	299	161	0.002	14.0	207681	208577	GCA_000161975.1|GG688422.1	192	0.19732441471571907	0.37267080745341613	1
Cas4_5_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_59	377	161	0.00058	15.8	63323	64453	GCA_000161975.1|GG688422.1	59	0.2917771883289125	0.6583850931677019	1
Cas5_1_IB	GCA_000161975.1|GG688422.1_592	311	241	0.0055	12.2	684208	685140	GCA_000161975.1|GG688422.1	592	0.17041800643086816	0.21991701244813278	1
Cas5_7_CAS-I-B	GCA_000161975.1|GG688422.1_592	311	239	0.0053	12.2	684208	685140	GCA_000161975.1|GG688422.1	592	0.17041800643086816	0.2217573221757322	1
Cas7_2_CAS-I-C	GCA_000161975.1|GG688422.1_838	93	283	0.0041	12.3	972268	972546	GCA_000161975.1|GG688422.1	838	0.2903225806451613	0.09540636042402827	1
Cas9_0_II-C2	GCA_000161975.1|GG688422.1_857	62	967	0.0091	9.9	982795	982980	GCA_000161975.1|GG688422.1	857	0.6935483870967742	0.03722854188210962	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_14	91	198	0.0002	16.8	20727	20999	GCA_000161975.1|GG688422.1	14	0.6483516483516484	0.29797979797979796	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_28	286	198	4.7e-05	18.9	36319	37176	GCA_000161975.1|GG688422.1	28	0.2062937062937063	0.29797979797979796	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_761	362	198	3.7e-06	22.5	887579	888664	GCA_000161975.1|GG688422.1	761	0.1878453038674033	0.3383838383838384	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_936	118	198	3.9e-08	28.9	1080817	1081170	GCA_000161975.1|GG688422.1	936	0.4830508474576271	0.29797979797979796	-1
CasR_0_CAS-III-B-III-D	GCA_000161975.1|GG688422.1_793	391	255	2.0	3.6	924820	925992	GCA_000161975.1|GG688422.1	793	0.3734015345268542	0.27058823529411763	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_14	91	218	1.8e-06	23.1	20727	20999	GCA_000161975.1|GG688422.1	14	0.6593406593406593	0.27522935779816515	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_28	286	218	3.7e-05	18.7	36319	37176	GCA_000161975.1|GG688422.1	28	0.2062937062937063	0.2706422018348624	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_761	362	218	2.8e-06	22.4	887579	888664	GCA_000161975.1|GG688422.1	761	0.18232044198895028	0.30275229357798167	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_936	118	218	9.8e-09	30.5	1080817	1081170	GCA_000161975.1|GG688422.1	936	0.4576271186440678	0.25688073394495414	-1
CasR_1_CAS-III-B	GCA_000161975.1|GG688422.1_455	391	173	0.00052	15.7	532626	533798	GCA_000161975.1|GG688422.1	455	0.08951406649616368	0.2023121387283237	-1
CasR_1_CAS-III-D	GCA_000161975.1|GG688422.1_734	187	493	0.004	11.7	857242	857802	GCA_000161975.1|GG688422.1	734	0.36363636363636365	0.13995943204868155	1
CorA_0_CAS-III-B-III-D	GCA_000161975.1|GG688422.1_704	115	551	0.01	10.3	827488	827832	GCA_000161975.1|GG688422.1	704	0.6347826086956522	0.11796733212341198	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_824	135	118	0.0053	12.9	953282	953686	GCA_000161975.1|GG688422.1	824	0.45185185185185184	0.3813559322033898	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_936	118	118	1.8e-18	62.8	1080817	1081170	GCA_000161975.1|GG688422.1	936	0.6949152542372882	0.7711864406779662	-1
Csa5gr11_6_CAS-I-A	GCA_000161975.1|GG688422.1_781	417	116	0.00075	15.4	914322	915572	GCA_000161975.1|GG688422.1	781	0.1366906474820144	0.4396551724137931	1
Csa5gr11_8_CAS-I-A	GCA_000161975.1|GG688422.1_209	115	109	0.0022	13.8	224824	225168	GCA_000161975.1|GG688422.1	209	0.5391304347826087	0.5596330275229358	-1
Csf4_1_IVA1	GCA_000161975.1|GG688422.1_321	911	802	0.0011	12.9	357919	360651	GCA_000161975.1|GG688422.1	321	0.06147091108671789	0.07605985037406483	-1
Csm2gr11_2_CAS-III-D	GCA_000161975.1|GG688422.1_449	342	145	0.0061	12.6	516865	517890	GCA_000161975.1|GG688422.1	449	0.15204678362573099	0.19310344827586207	-1
Csm2gr11_3_CAS-III-A	GCA_000161975.1|GG688422.1_441	1241	141	0.0028	13.7	503797	507519	GCA_000161975.1|GG688422.1	441	0.0652699435938759	0.574468085106383	-1
Csm2gr11_5_CAS-III-D	GCA_000161975.1|GG688422.1_449	342	121	0.00019	17.2	516865	517890	GCA_000161975.1|GG688422.1	449	0.2046783625730994	0.34710743801652894	-1
Csm5_0_IIIA	GCA_000161975.1|GG688422.1_589	295	364	9.9e-05	17.7	681685	682569	GCA_000161975.1|GG688422.1	589	0.18983050847457628	0.1510989010989011	-1
Csm5gr7_0_CAS-III-A-III-D	GCA_000161975.1|GG688422.1_589	295	365	1.8e-05	20.0	681685	682569	GCA_000161975.1|GG688422.1	589	0.21016949152542372	0.16986301369863013	-1
Csn2_7_CAS-II-A	GCA_000161975.1|GG688422.1_116	292	372	0.0008	14.2	118207	119082	GCA_000161975.1|GG688422.1	116	0.22945205479452055	0.1774193548387097	1
Csn2_7_CAS-II-A	GCA_000161975.1|GG688422.1_258	289	372	9.6e-05	17.3	280525	281391	GCA_000161975.1|GG688422.1	258	0.4117647058823529	0.32526881720430106	-1
Csn2_7_CAS-II-A	GCA_000161975.1|GG688422.1_297	472	372	6.8e-06	21.0	335458	336873	GCA_000161975.1|GG688422.1	297	0.288135593220339	0.25	-1
Csn2_7_CAS-II-A	GCA_000161975.1|GG688422.1_683	461	372	2.5e-05	19.2	800548	801930	GCA_000161975.1|GG688422.1	683	0.3362255965292842	0.3064516129032258	1
Csx18_0_CAS-I-III	GCA_000161975.1|GG688422.1_367	379	96	0.0046	12.7	416963	418099	GCA_000161975.1|GG688422.1	367	0.11873350923482849	0.3020833333333333	-1
Csx19_10_CAS-III-D	GCA_000161975.1|GG688422.1_352	952	121	0.0019	14.2	401189	404044	GCA_000161975.1|GG688422.1	352	0.059873949579831935	0.4380165289256198	-1
Csx1_18_CAS-III	GCA_000161975.1|GG688422.1_659	902	376	0.25	6.6	756639	759344	GCA_000161975.1|GG688422.1	659	0.33813747228381374	0.425531914893617	1
Csx3_2_CAS-I-III	GCA_000161975.1|GG688422.1_117	441	277	9.5e-05	17.4	119112	120434	GCA_000161975.1|GG688422.1	117	0.16326530612244897	0.16967509025270758	1
Csx3_2_CAS-I-III	GCA_000161975.1|GG688422.1_338	321	277	0.0011	13.9	385510	386472	GCA_000161975.1|GG688422.1	338	0.09968847352024922	0.12274368231046931	-1
Csx3_2_CAS-I-III	GCA_000161975.1|GG688422.1_342	285	277	0.0036	12.2	389903	390757	GCA_000161975.1|GG688422.1	342	0.10175438596491228	0.10469314079422383	-1
Csx3_2_CAS-I-III	GCA_000161975.1|GG688422.1_446	428	277	0.005	11.7	513511	514794	GCA_000161975.1|GG688422.1	446	0.11214953271028037	0.17328519855595667	-1
Csx3_2_CAS-I-III	GCA_000161975.1|GG688422.1_608	454	277	0.0025	12.8	699915	701276	GCA_000161975.1|GG688422.1	608	0.08590308370044053	0.1299638989169675	-1
CysH_0_IVB	GCA_000161975.1|GG688422.1_107	349	249	0.0011	14.5	103966	105012	GCA_000161975.1|GG688422.1	107	0.14613180515759314	0.20883534136546184	1
CysH_0_IVB	GCA_000161975.1|GG688422.1_322	327	249	0.0035	12.8	360732	361712	GCA_000161975.1|GG688422.1	322	0.1529051987767584	0.20481927710843373	-1
CysH_0_IVB	GCA_000161975.1|GG688422.1_892	352	249	3.4e-07	26.0	1028792	1029847	GCA_000161975.1|GG688422.1	892	0.19602272727272727	0.27710843373493976	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_806	346	160	2.5e-07	26.8	937186	938223	GCA_000161975.1|GG688422.1	806	0.25722543352601157	0.51875	-1
Mem_DnaJ_0_CAS-III-AM	GCA_000161975.1|GG688422.1_377	391	284	0.00094	14.4	428472	429644	GCA_000161975.1|GG688422.1	377	0.13810741687979539	0.20774647887323944	-1
RT_0_CAS-III-AM-III-B	GCA_000161975.1|GG688422.1_494	506	298	0.005	11.5	569210	570727	GCA_000161975.1|GG688422.1	494	0.06521739130434782	0.11073825503355705	-1
RecD_0_IVD	GCA_000161975.1|GG688422.1_116	292	763	2.4e-07	25.0	118207	119082	GCA_000161975.1|GG688422.1	116	0.3424657534246575	0.12844036697247707	1
RecD_0_IVD	GCA_000161975.1|GG688422.1_326	474	763	2.3e-05	18.4	364272	365693	GCA_000161975.1|GG688422.1	326	0.2552742616033755	0.15334207077326342	-1
RecD_0_IVD	GCA_000161975.1|GG688422.1_773	742	763	4.8e-81	268.7	903068	905293	GCA_000161975.1|GG688422.1	773	0.8584905660377359	0.8689384010484927	1
RecD_0_IVD	GCA_000161975.1|GG688422.1_885	754	763	2.7e-07	24.8	1018062	1020323	GCA_000161975.1|GG688422.1	885	0.23607427055702918	0.21231979030144169	1
TnsC_0_V-K	GCA_000161975.1|GG688422.1_275	281	283	0.0011	13.8	309568	310410	GCA_000161975.1|GG688422.1	275	0.3202846975088968	0.31448763250883394	-1
WYL_0_CAS-I-II-III-IV-V-VI	GCA_000161975.1|GG688422.1_625	155	313	0.00085	14.7	719186	719650	GCA_000161975.1|GG688422.1	625	0.3419354838709677	0.15335463258785942	-1