Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_114	270	284	1.2e-05	20.9	138811	139620	GCA_005885795.1|CP040555.1	114	0.3888888888888889	0.35563380281690143	-1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_157	267	284	6.4e-05	18.5	186879	187679	GCA_005885795.1|CP040555.1	157	0.21722846441947566	0.2007042253521127	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_215	256	284	0.015	10.8	237005	237772	GCA_005885795.1|CP040555.1	215	0.32421875	0.27816901408450706	-1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_32	239	284	0.0004	15.9	42944	43660	GCA_005885795.1|CP040555.1	32	0.4225941422594142	0.3485915492957746	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_342	942	284	1e-06	24.4	390808	393633	GCA_005885795.1|CP040555.1	342	0.19957537154989385	0.5422535211267606	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_475	416	284	0.00062	15.3	544802	546049	GCA_005885795.1|CP040555.1	475	0.07932692307692307	0.11619718309859155	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_574	260	284	0.00016	17.2	665252	666031	GCA_005885795.1|CP040555.1	574	0.5153846153846153	0.4647887323943662	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_614	376	284	0.00028	16.4	717510	718637	GCA_005885795.1|CP040555.1	614	0.2074468085106383	0.2676056338028169	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_745	283	284	0.003	13.0	853741	854589	GCA_005885795.1|CP040555.1	745	0.3674911660777385	0.30985915492957744	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_759	388	284	8.1e-05	18.1	874251	875414	GCA_005885795.1|CP040555.1	759	0.327319587628866	0.44014084507042256	1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_790	555	284	0.002	13.6	909798	911462	GCA_005885795.1|CP040555.1	790	0.14234234234234233	0.27816901408450706	-1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_830	281	284	1.5e-05	20.6	959701	960543	GCA_005885795.1|CP040555.1	830	0.44483985765124556	0.3274647887323944	-1
AbiEii_0_CAS-III	GCA_005885795.1|CP040555.1_911	236	284	0.00014	17.4	1047652	1048359	GCA_005885795.1|CP040555.1	911	0.4152542372881356	0.33098591549295775	-1
AbiEii_1_CAS-III-A	GCA_005885795.1|CP040555.1_157	267	335	0.0014	13.7	186879	187679	GCA_005885795.1|CP040555.1	157	0.15730337078651685	0.11940298507462686	1
AbiEii_1_CAS-III-A	GCA_005885795.1|CP040555.1_342	942	335	0.032	9.2	390808	393633	GCA_005885795.1|CP040555.1	342	0.31422505307855625	0.4925373134328358	1
Cas10_1_CAS-III	GCA_005885795.1|CP040555.1_965	505	654	5e-05	17.9	1111752	1113266	GCA_005885795.1|CP040555.1	965	0.29108910891089107	0.2324159021406728	1
Cas12e_1_CAS-V-E	GCA_005885795.1|CP040555.1_224	186	986	0.0063	10.1	243697	244254	GCA_005885795.1|CP040555.1	224	0.20967741935483872	0.03955375253549696	1
Cas12f2_1_CAS-V-F	GCA_005885795.1|CP040555.1_425	117	422	3.0	2.6	484552	484902	GCA_005885795.1|CP040555.1	425	0.358974358974359	0.08293838862559241	1
Cas12j_0_V-J	GCA_005885795.1|CP040555.1_425	117	758	2.0	2.0	484552	484902	GCA_005885795.1|CP040555.1	425	0.42735042735042733	0.04617414248021108	1
Cas13d_0_CAS-VI-D	GCA_005885795.1|CP040555.1_781	295	929	0.0039	11.2	897530	898414	GCA_005885795.1|CP040555.1	781	0.3559322033898305	0.11517761033369214	1
Cas2_0_CAS-III-AM	GCA_005885795.1|CP040555.1_656	598	95	0.014	11.7	764240	766033	GCA_005885795.1|CP040555.1	656	0.12207357859531773	0.6	1
Cas3HD_0_CAS-I	GCA_005885795.1|CP040555.1_613	855	203	7.1e-06	21.8	714909	717473	GCA_005885795.1|CP040555.1	613	0.16842105263157894	0.6699507389162561	-1
Cas3HD_0_CAS-I	GCA_005885795.1|CP040555.1_826	366	203	0.0011	14.6	955442	956539	GCA_005885795.1|CP040555.1	826	0.19398907103825136	0.24630541871921183	1
Cas3HD_0_CAS-I	GCA_005885795.1|CP040555.1_965	505	203	0.0001	18.1	1111752	1113266	GCA_005885795.1|CP040555.1	965	0.17425742574257425	0.42857142857142855	1
Cas3_0_CAS-I	GCA_005885795.1|CP040555.1_320	1149	353	7.4e-08	27.7	367654	371100	GCA_005885795.1|CP040555.1	320	0.16013925152306355	0.5354107648725213	-1
Cas3_0_CAS-I	GCA_005885795.1|CP040555.1_494	669	353	8.5e-06	20.9	569897	571903	GCA_005885795.1|CP040555.1	494	0.3243647234678625	0.5949008498583569	1
Cas3_0_CAS-I	GCA_005885795.1|CP040555.1_648	687	353	1.6e-08	29.9	754601	756661	GCA_005885795.1|CP040555.1	648	0.15574963609898107	0.3031161473087819	-1
Cas3_0_CAS-I	GCA_005885795.1|CP040555.1_729	607	353	5.9e-10	34.6	837890	839710	GCA_005885795.1|CP040555.1	729	0.33607907742998355	0.5835694050991501	1
Cas3_0_CAS-I-D	GCA_005885795.1|CP040555.1_97	608	626	0.00076	13.6	111802	113625	GCA_005885795.1|CP040555.1	97	0.16447368421052633	0.15654952076677317	1
Cas3_0_I	GCA_005885795.1|CP040555.1_320	1149	358	4.3e-06	21.9	367654	371100	GCA_005885795.1|CP040555.1	320	0.13489991296779807	0.43854748603351956	-1
Cas3_0_I	GCA_005885795.1|CP040555.1_494	669	358	5.8e-07	24.7	569897	571903	GCA_005885795.1|CP040555.1	494	0.32585949177877427	0.5977653631284916	1
Cas3_0_I	GCA_005885795.1|CP040555.1_648	687	358	1.6e-08	29.9	754601	756661	GCA_005885795.1|CP040555.1	648	0.12372634643377002	0.23743016759776536	-1
Cas3_0_I	GCA_005885795.1|CP040555.1_729	607	358	3.1e-09	32.2	837890	839710	GCA_005885795.1|CP040555.1	729	0.32948929159802304	0.5726256983240223	1
Cas3_0_ID	GCA_005885795.1|CP040555.1_648	687	357	4.7e-06	21.7	754601	756661	GCA_005885795.1|CP040555.1	648	0.2445414847161572	0.453781512605042	-1
Cas3_0_ID	GCA_005885795.1|CP040555.1_729	607	357	0.00032	15.7	837890	839710	GCA_005885795.1|CP040555.1	729	0.16639209225700163	0.2605042016806723	1
Cas3_0_ID	GCA_005885795.1|CP040555.1_97	608	357	0.0013	13.8	111802	113625	GCA_005885795.1|CP040555.1	97	0.11677631578947369	0.19887955182072828	1
Cas3_1_CAS-I	GCA_005885795.1|CP040555.1_320	1149	745	1.9e-07	25.6	367654	371100	GCA_005885795.1|CP040555.1	320	0.22541340295909487	0.24563758389261744	-1
Cas3_1_CAS-I	GCA_005885795.1|CP040555.1_648	687	745	9.5e-08	26.6	754601	756661	GCA_005885795.1|CP040555.1	648	0.10043668122270742	0.0953020134228188	-1
Cas3_1_CAS-I-D	GCA_005885795.1|CP040555.1_648	687	353	5.3e-06	21.6	754601	756661	GCA_005885795.1|CP040555.1	648	0.23580786026200873	0.44192634560906513	-1
Cas3_1_CAS-I-D	GCA_005885795.1|CP040555.1_729	607	353	0.00012	17.1	837890	839710	GCA_005885795.1|CP040555.1	729	0.16639209225700163	0.26345609065155806	1
Cas3_1_CAS-I-D	GCA_005885795.1|CP040555.1_97	608	353	0.0018	13.3	111802	113625	GCA_005885795.1|CP040555.1	97	0.06578947368421052	0.11331444759206799	1
Cas3_1_I	GCA_005885795.1|CP040555.1_613	855	178	2.8e-06	23.3	714909	717473	GCA_005885795.1|CP040555.1	613	0.12748538011695906	0.6179775280898876	-1
Cas3_1_I	GCA_005885795.1|CP040555.1_826	366	178	0.00038	16.4	955442	956539	GCA_005885795.1|CP040555.1	826	0.12295081967213115	0.23595505617977527	1
Cas3_1_I	GCA_005885795.1|CP040555.1_965	505	178	0.0063	12.4	1111752	1113266	GCA_005885795.1|CP040555.1	965	0.16633663366336635	0.5168539325842697	1
Cas3_2_CAS-I	GCA_005885795.1|CP040555.1_648	687	967	2.6e-08	28.2	754601	756661	GCA_005885795.1|CP040555.1	648	0.4163027656477438	0.29782833505687695	-1
Cas3_2_CAS-I	GCA_005885795.1|CP040555.1_729	607	967	2.1e-06	21.9	837890	839710	GCA_005885795.1|CP040555.1	729	0.3871499176276771	0.23164426059979318	1
Cas3d_1_CAS-I-D	GCA_005885795.1|CP040555.1_97	608	627	1.2e-06	23.0	111802	113625	GCA_005885795.1|CP040555.1	97	0.16282894736842105	0.15311004784688995	1
Cas4_0_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_860	127	179	0.0014	14.7	993301	993681	GCA_005885795.1|CP040555.1	860	0.25984251968503935	0.18435754189944134	1
Cas4_0_I-II-V	GCA_005885795.1|CP040555.1_860	127	177	0.0024	13.8	993301	993681	GCA_005885795.1|CP040555.1	860	0.2677165354330709	0.1864406779661017	1
Cas5_4_CAS-I-B	GCA_005885795.1|CP040555.1_22	1024	190	0.0047	12.4	29861	32932	GCA_005885795.1|CP040555.1	22	0.056640625	0.3	-1
Cas5f_1_CAS-I-F	GCA_005885795.1|CP040555.1_120	224	293	0.00051	15.3	147625	148296	GCA_005885795.1|CP040555.1	120	0.14285714285714285	0.10921501706484642	-1
Cas6_15_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_916	562	112	6e-05	19.5	1054205	1055890	GCA_005885795.1|CP040555.1	916	0.14590747330960854	0.6339285714285714	-1
Cas8a1_1_IA	GCA_005885795.1|CP040555.1_372	125	316	0.0023	12.5	423968	424342	GCA_005885795.1|CP040555.1	372	0.36	0.14240506329113925	1
Cas8c_1_CAS-I-C	GCA_005885795.1|CP040555.1_422	699	570	0.0029	12.0	477865	479961	GCA_005885795.1|CP040555.1	422	0.12017167381974249	0.1456140350877193	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_101	604	218	0.0064	11.5	120358	122169	GCA_005885795.1|CP040555.1	101	0.11092715231788079	0.22477064220183487	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_160	154	218	0.0025	12.9	189664	190125	GCA_005885795.1|CP040555.1	160	0.3051948051948052	0.21100917431192662	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_259	325	218	0.0013	13.7	288735	289709	GCA_005885795.1|CP040555.1	259	0.1723076923076923	0.23853211009174313	-1
Csf4_1_IVA1	GCA_005885795.1|CP040555.1_218	658	802	0.00043	14.4	239436	241409	GCA_005885795.1|CP040555.1	218	0.1474164133738602	0.12468827930174564	1
Csm2gr11_3_CAS-III-D	GCA_005885795.1|CP040555.1_782	262	130	0.01	11.5	898411	899196	GCA_005885795.1|CP040555.1	782	0.16793893129770993	0.3384615384615385	1
Csn2_10_CAS-II-A	GCA_005885795.1|CP040555.1_300	534	321	0.016	10.2	337320	338921	GCA_005885795.1|CP040555.1	300	0.08801498127340825	0.14641744548286603	1
Csn2_7_CAS-II-A	GCA_005885795.1|CP040555.1_215	256	372	0.009	10.8	237005	237772	GCA_005885795.1|CP040555.1	215	0.2578125	0.17473118279569894	-1
Csn2_7_CAS-II-A	GCA_005885795.1|CP040555.1_646	497	372	0.0031	12.4	751373	752863	GCA_005885795.1|CP040555.1	646	0.16901408450704225	0.22311827956989247	1
Csx16_2_CAS-I-III	GCA_005885795.1|CP040555.1_411	158	90	0.0021	14.2	466725	467198	GCA_005885795.1|CP040555.1	411	0.4873417721518987	0.6444444444444445	1
Csx19_20_CAS-III-D	GCA_005885795.1|CP040555.1_41	234	147	0.006	12.1	55806	56507	GCA_005885795.1|CP040555.1	41	0.12393162393162394	0.19727891156462585	-1
Csx1_18_CAS-III	GCA_005885795.1|CP040555.1_463	315	376	0.003	13.0	532684	533628	GCA_005885795.1|CP040555.1	463	0.36507936507936506	0.23404255319148937	1
Csx3_2_CAS-I-III	GCA_005885795.1|CP040555.1_242	520	277	0.00044	15.3	266714	268273	GCA_005885795.1|CP040555.1	242	0.05961538461538462	0.11913357400722022	1
Csx3_2_CAS-I-III	GCA_005885795.1|CP040555.1_475	416	277	0.00073	14.6	544802	546049	GCA_005885795.1|CP040555.1	475	0.11298076923076923	0.17328519855595667	1
Csx3_2_CAS-I-III	GCA_005885795.1|CP040555.1_518	496	277	0.00096	14.2	597341	598828	GCA_005885795.1|CP040555.1	518	0.1774193548387097	0.30685920577617326	-1
Csx3_2_CAS-I-III	GCA_005885795.1|CP040555.1_650	461	277	5.1e-07	24.9	757731	759113	GCA_005885795.1|CP040555.1	650	0.10629067245119306	0.09025270758122744	-1
Csy2_0_IF	GCA_005885795.1|CP040555.1_120	224	296	0.00046	15.4	147625	148296	GCA_005885795.1|CP040555.1	120	0.14732142857142858	0.11148648648648649	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_606	216	160	3.8e-49	162.8	706583	707230	GCA_005885795.1|CP040555.1	606	0.7268518518518519	0.9875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_005885795.1|CP040555.1_99	1016	160	7.9e-12	41.5	115766	118813	GCA_005885795.1|CP040555.1	99	0.1594488188976378	0.83125	1
Mem_DnaJ_0_CAS-III-AM	GCA_005885795.1|CP040555.1_205	401	284	3.2e-06	22.5	222016	223218	GCA_005885795.1|CP040555.1	205	0.13466334164588528	0.20774647887323944	1
RecD_0_IVD	GCA_005885795.1|CP040555.1_648	687	763	0.0054	10.7	754601	756661	GCA_005885795.1|CP040555.1	648	0.10043668122270742	0.08256880733944955	-1
RecD_0_IVD	GCA_005885795.1|CP040555.1_847	1240	763	0.001	13.1	977635	981354	GCA_005885795.1|CP040555.1	847	0.062096774193548386	0.09960681520314547	-1
RecD_0_IVD	GCA_005885795.1|CP040555.1_952	573	763	0.0024	11.8	1095058	1096776	GCA_005885795.1|CP040555.1	952	0.19720767888307156	0.14678899082568808	-1
RecD_0_IVD	GCA_005885795.1|CP040555.1_976	686	763	1.9e-08	28.7	1122855	1124912	GCA_005885795.1|CP040555.1	976	0.32653061224489793	0.27391874180865006	-1
TPR_0_CAS-III-A	GCA_005885795.1|CP040555.1_773	254	435	0.00072	14.5	889808	890569	GCA_005885795.1|CP040555.1	773	0.4094488188976378	0.23908045977011494	-1
TPR_0_CAS-III-B	GCA_005885795.1|CP040555.1_366	251	488	9.2e-06	20.5	418110	418862	GCA_005885795.1|CP040555.1	366	0.6772908366533864	0.35860655737704916	1
TPR_0_CAS-III-B	GCA_005885795.1|CP040555.1_61	383	488	3.9e-08	28.3	72692	73840	GCA_005885795.1|CP040555.1	61	0.7676240208877284	0.569672131147541	1
TPR_0_CAS-III-B	GCA_005885795.1|CP040555.1_901	479	488	0.0017	13.0	1036953	1038389	GCA_005885795.1|CP040555.1	901	0.27139874739039666	0.22745901639344263	-1
TPR_1_CAS-III-A	GCA_005885795.1|CP040555.1_117	848	462	0.00086	13.9	143027	145570	GCA_005885795.1|CP040555.1	117	0.17570754716981132	0.3181818181818182	1
TPR_1_CAS-III-B	GCA_005885795.1|CP040555.1_117	848	537	0.00032	15.4	143027	145570	GCA_005885795.1|CP040555.1	117	0.2205188679245283	0.32774674115456237	1
TPR_1_CAS-III-B	GCA_005885795.1|CP040555.1_366	251	537	0.013	10.0	418110	418862	GCA_005885795.1|CP040555.1	366	0.6653386454183267	0.2774674115456238	1
TPR_1_CAS-III-B	GCA_005885795.1|CP040555.1_61	383	537	2.2e-11	39.1	72692	73840	GCA_005885795.1|CP040555.1	61	0.7362924281984334	0.26629422718808193	1
TPR_1_CAS-III-B	GCA_005885795.1|CP040555.1_901	479	537	1.3e-05	20.0	1036953	1038389	GCA_005885795.1|CP040555.1	901	0.5824634655532359	0.47113594040968343	-1