Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_1113	308	284	1.3e-05	21.3	652237	653160	GCA_009939745.1|CP039761.1	1113	0.08441558441558442	0.09154929577464789	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_1394	195	284	0.0017	14.3	807921	808505	GCA_009939745.1|CP039761.1	1394	0.4512820512820513	0.29225352112676056	-1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_1403	222	284	5e-05	19.4	814602	815267	GCA_009939745.1|CP039761.1	1403	0.44144144144144143	0.3274647887323944	-1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_179	464	284	0.00013	17.9	100479	101870	GCA_009939745.1|CP039761.1	179	0.28448275862068967	0.44366197183098594	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_32	94	284	0.0022	14.0	22157	22438	GCA_009939745.1|CP039761.1	32	0.24468085106382978	0.07746478873239436	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_404	272	284	0.00024	17.1	231009	231824	GCA_009939745.1|CP039761.1	404	0.46691176470588236	0.47183098591549294	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_469	190	284	0.0026	13.7	269709	270278	GCA_009939745.1|CP039761.1	469	0.28421052631578947	0.18661971830985916	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_537	308	284	0.0016	14.4	306302	307225	GCA_009939745.1|CP039761.1	537	0.41883116883116883	0.45774647887323944	1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_886	150	284	8.5e-05	18.6	512250	512699	GCA_009939745.1|CP039761.1	886	0.18666666666666668	0.09859154929577464	-1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_895	310	284	4.7e-07	26.0	517981	518910	GCA_009939745.1|CP039761.1	895	0.3419354838709677	0.3591549295774648	-1
AbiEii_0_CAS-III	GCA_009939745.1|CP039761.1_896	237	284	0.00019	17.4	519126	519836	GCA_009939745.1|CP039761.1	896	0.39662447257383965	0.31338028169014087	-1
AbiEii_1_CAS-III-A	GCA_009939745.1|CP039761.1_1253	123	335	0.00079	15.0	731360	731728	GCA_009939745.1|CP039761.1	1253	0.5447154471544715	0.1880597014925373	-1
AbiEii_1_CAS-III-A	GCA_009939745.1|CP039761.1_886	150	335	0.01	11.4	512250	512699	GCA_009939745.1|CP039761.1	886	0.24666666666666667	0.10746268656716418	-1
Cas11_1_IV	GCA_009939745.1|CP039761.1_15	87	122	0.0059	13.3	12316	12576	GCA_009939745.1|CP039761.1	15	0.7586206896551724	0.5163934426229508	1
Cas12m_0_V-M	GCA_009939745.1|CP039761.1_467	330	577	0.12	7.1	268527	269516	GCA_009939745.1|CP039761.1	467	0.2515151515151515	0.14558058925476602	1
Cas3HD_0_CAS-I	GCA_009939745.1|CP039761.1_1385	377	203	0.0013	14.9	802932	804062	GCA_009939745.1|CP039761.1	1385	0.21220159151193635	0.41379310344827586	-1
Cas3HD_0_CAS-I	GCA_009939745.1|CP039761.1_559	438	203	2.5e-06	23.8	317988	319301	GCA_009939745.1|CP039761.1	559	0.3904109589041096	0.812807881773399	1
Cas3HD_0_CAS-I	GCA_009939745.1|CP039761.1_688	116	203	0.003	13.7	396966	397313	GCA_009939745.1|CP039761.1	688	0.3103448275862069	0.21674876847290642	-1
Cas3_0_CAS-I	GCA_009939745.1|CP039761.1_1291	114	353	0.00013	17.6	751892	752233	GCA_009939745.1|CP039761.1	1291	0.5263157894736842	0.16147308781869688	1
Cas3_0_CAS-I	GCA_009939745.1|CP039761.1_923	152	353	0.00021	16.8	535363	535818	GCA_009939745.1|CP039761.1	923	0.6513157894736842	0.2719546742209632	-1
Cas3_0_I	GCA_009939745.1|CP039761.1_1113	308	358	0.01	11.2	652237	653160	GCA_009939745.1|CP039761.1	1113	0.38636363636363635	0.329608938547486	1
Cas3_0_I	GCA_009939745.1|CP039761.1_1291	114	358	0.0023	13.4	751892	752233	GCA_009939745.1|CP039761.1	1291	0.4649122807017544	0.13966480446927373	1
Cas3_0_I	GCA_009939745.1|CP039761.1_923	152	358	0.00014	17.4	535363	535818	GCA_009939745.1|CP039761.1	923	0.631578947368421	0.25977653631284914	-1
Cas3_0_ID	GCA_009939745.1|CP039761.1_1291	114	357	0.0041	12.6	751892	752233	GCA_009939745.1|CP039761.1	1291	0.4649122807017544	0.13445378151260504	1
Cas3_1_CAS-I	GCA_009939745.1|CP039761.1_1291	114	745	5.1e-07	24.7	751892	752233	GCA_009939745.1|CP039761.1	1291	0.5614035087719298	0.08456375838926175	1
Cas3_1_CAS-I	GCA_009939745.1|CP039761.1_923	152	745	0.00063	14.5	535363	535818	GCA_009939745.1|CP039761.1	923	0.26973684210526316	0.05771812080536913	-1
Cas3_1_CAS-I-D	GCA_009939745.1|CP039761.1_1291	114	353	0.00074	15.0	751892	752233	GCA_009939745.1|CP039761.1	1291	0.49122807017543857	0.14447592067988668	1
Cas3_1_I	GCA_009939745.1|CP039761.1_1385	377	178	0.0019	14.6	802932	804062	GCA_009939745.1|CP039761.1	1385	0.3076923076923077	0.5337078651685393	-1
Cas3_1_I	GCA_009939745.1|CP039761.1_559	438	178	0.0053	13.1	317988	319301	GCA_009939745.1|CP039761.1	559	0.271689497716895	0.8089887640449438	1
Cas3_2_CAS-I	GCA_009939745.1|CP039761.1_1291	114	967	0.0011	13.4	751892	752233	GCA_009939745.1|CP039761.1	1291	0.7280701754385965	0.0827300930713547	1
Cas3d_1_CAS-I-D	GCA_009939745.1|CP039761.1_1291	114	627	0.0025	12.4	751892	752233	GCA_009939745.1|CP039761.1	1291	0.45614035087719296	0.0685805422647528	1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_1374	346	210	0.0043	13.5	794761	795798	GCA_009939745.1|CP039761.1	1374	0.2832369942196532	0.45714285714285713	-1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_981	170	210	0.0031	13.9	576185	576694	GCA_009939745.1|CP039761.1	981	0.5294117647058824	0.3952380952380952	-1
Cas6f_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_1193	121	186	0.0023	14.2	700302	700664	GCA_009939745.1|CP039761.1	1193	0.6611570247933884	0.41935483870967744	-1
Cas7_0_CAS-I-C	GCA_009939745.1|CP039761.1_616	150	268	0.0058	12.5	350207	350656	GCA_009939745.1|CP039761.1	616	0.4066666666666667	0.22761194029850745	1
Cas7_1_CAS-I-E	GCA_009939745.1|CP039761.1_219	128	359	0.024	10.4	129509	129892	GCA_009939745.1|CP039761.1	219	0.6015625	0.19220055710306408	1
Cas7_1_CAS-I-E	GCA_009939745.1|CP039761.1_966	121	359	0.012	11.4	563536	563898	GCA_009939745.1|CP039761.1	966	0.7024793388429752	0.233983286908078	1
Cas7_3_IB	GCA_009939745.1|CP039761.1_616	150	268	0.0036	13.2	350207	350656	GCA_009939745.1|CP039761.1	616	0.6	0.3358208955223881	1
Cas9_0_II-C2	GCA_009939745.1|CP039761.1_388	61	967	0.049	8.0	223099	223281	GCA_009939745.1|CP039761.1	388	0.8360655737704918	0.045501551189245086	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_1113	308	198	0.0028	13.6	652237	653160	GCA_009939745.1|CP039761.1	1113	0.17857142857142858	0.2727272727272727	1
CasR_0_CAS-III-B-III-D	GCA_009939745.1|CP039761.1_943	107	255	0.00055	15.9	548089	548409	GCA_009939745.1|CP039761.1	943	0.6822429906542056	0.2980392156862745	-1
CasR_0_CAS-III-B-III-D	GCA_009939745.1|CP039761.1_951	174	255	0.2	7.5	552713	553234	GCA_009939745.1|CP039761.1	951	0.7126436781609196	0.26666666666666666	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_1113	308	218	0.001	14.7	652237	653160	GCA_009939745.1|CP039761.1	1113	0.2987012987012987	0.2706422018348624	1
Cmr1gr7_5_CAS-III-B-III-C	GCA_009939745.1|CP039761.1_1243	125	340	0.0068	12.3	725946	726320	GCA_009939745.1|CP039761.1	1243	0.688	0.25882352941176473	-1
Cmr5gr11_10_CAS-III-B	GCA_009939745.1|CP039761.1_434	93	146	0.0013	15.2	246036	246314	GCA_009939745.1|CP039761.1	434	0.4946236559139785	0.3150684931506849	1
Cmr5gr11_10_CAS-III-B	GCA_009939745.1|CP039761.1_850	93	146	0.00097	15.6	493018	493296	GCA_009939745.1|CP039761.1	850	0.5161290322580645	0.3287671232876712	1
Cmr5gr11_2_CAS-III-B	GCA_009939745.1|CP039761.1_245	56	138	0.0036	13.9	144305	144472	GCA_009939745.1|CP039761.1	245	0.8392857142857143	0.34057971014492755	1
Cmr5gr11_3_CAS-III-B	GCA_009939745.1|CP039761.1_1290	87	119	0.0048	13.7	751474	751734	GCA_009939745.1|CP039761.1	1290	0.4827586206896552	0.35294117647058826	-1
CorA_1_CAS-III-B	GCA_009939745.1|CP039761.1_754	125	125	0.0014	14.9	437534	437908	GCA_009939745.1|CP039761.1	754	0.376	0.384	1
Csc2_0_ID	GCA_009939745.1|CP039761.1_1139	87	282	0.0028	13.3	667813	668073	GCA_009939745.1|CP039761.1	1139	0.4367816091954023	0.1347517730496454	-1
Csf2_1_IVA3	GCA_009939745.1|CP039761.1_1243	125	263	0.28	6.8	725946	726320	GCA_009939745.1|CP039761.1	1243	0.528	0.24714828897338403	-1
Csf2_1_IVA3	GCA_009939745.1|CP039761.1_679	454	263	0.0022	13.6	389680	391041	GCA_009939745.1|CP039761.1	679	0.21365638766519823	0.376425855513308	1
Csf4_0_IVA	GCA_009939745.1|CP039761.1_1291	114	666	0.0023	12.9	751892	752233	GCA_009939745.1|CP039761.1	1291	0.4473684210526316	0.07207207207207207	1
Csf4_0_IVA	GCA_009939745.1|CP039761.1_923	152	666	1.1e-06	23.9	535363	535818	GCA_009939745.1|CP039761.1	923	0.4276315789473684	0.0960960960960961	-1
Csm4_1_IIIA	GCA_009939745.1|CP039761.1_648	167	319	0.00067	15.2	368750	369250	GCA_009939745.1|CP039761.1	648	0.49101796407185627	0.2445141065830721	1
Csm4gr5_0_CAS-III-A-III-D	GCA_009939745.1|CP039761.1_87	279	317	0.065	8.8	49648	50484	GCA_009939745.1|CP039761.1	87	0.20430107526881722	0.1829652996845426	1
Csm4gr5_1_CAS-III-A	GCA_009939745.1|CP039761.1_648	167	315	0.00068	15.3	368750	369250	GCA_009939745.1|CP039761.1	648	0.46107784431137727	0.23174603174603176	1
Csm5gr7_2_CAS-III-A-III-D	GCA_009939745.1|CP039761.1_648	167	258	0.28	6.9	368750	369250	GCA_009939745.1|CP039761.1	648	0.5688622754491018	0.2868217054263566	1
Csn2_1_CAS-II-A	GCA_009939745.1|CP039761.1_649	358	218	0.0023	14.0	369265	370338	GCA_009939745.1|CP039761.1	649	0.25977653631284914	0.24311926605504589	1
Csn2_7_CAS-II-A	GCA_009939745.1|CP039761.1_404	272	372	0.0045	12.4	231009	231824	GCA_009939745.1|CP039761.1	404	0.16911764705882354	0.12365591397849462	1
Csn2_7_CAS-II-A	GCA_009939745.1|CP039761.1_861	101	372	0.00094	14.6	499100	499402	GCA_009939745.1|CP039761.1	861	0.5346534653465347	0.1478494623655914	1
Csx19_8_CAS-III-D	GCA_009939745.1|CP039761.1_1041	78	148	0.0032	14.2	607613	607846	GCA_009939745.1|CP039761.1	1041	0.6282051282051282	0.3108108108108108	1
Csx1_13_CAS-III	GCA_009939745.1|CP039761.1_297	190	426	0.0017	13.7	173325	173894	GCA_009939745.1|CP039761.1	297	0.3631578947368421	0.15258215962441316	1
Csx1_1_CAS-III	GCA_009939745.1|CP039761.1_305	127	214	0.0021	14.5	177509	177889	GCA_009939745.1|CP039761.1	305	0.6220472440944882	0.3691588785046729	-1
Csx1_6_CAS-III	GCA_009939745.1|CP039761.1_776	75	406	0.00099	14.7	451578	451802	GCA_009939745.1|CP039761.1	776	0.6	0.09852216748768473	1
Csx3_2_CAS-I-III	GCA_009939745.1|CP039761.1_1156	389	277	0.0006	15.3	677944	679110	GCA_009939745.1|CP039761.1	1156	0.10025706940874037	0.1407942238267148	-1
Csx3_2_CAS-I-III	GCA_009939745.1|CP039761.1_679	454	277	0.00032	16.2	389680	391041	GCA_009939745.1|CP039761.1	679	0.08590308370044053	0.13357400722021662	1
Csx3_2_CAS-I-III	GCA_009939745.1|CP039761.1_979	300	277	3e-05	19.6	574604	575503	GCA_009939745.1|CP039761.1	979	0.2833333333333333	0.22743682310469315	-1
CysH_0_IVB	GCA_009939745.1|CP039761.1_880	89	249	0.0061	12.6	507754	508020	GCA_009939745.1|CP039761.1	880	0.4157303370786517	0.14859437751004015	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_67	264	160	1.8e-17	60.3	38800	39591	GCA_009939745.1|CP039761.1	67	0.29924242424242425	0.4875	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_009939745.1|CP039761.1_68	154	160	3.8e-15	52.8	39607	40068	GCA_009939745.1|CP039761.1	68	0.474025974025974	0.4625	-1
Mem_DnaJ_0_CAS-III-AM	GCA_009939745.1|CP039761.1_41	391	284	3.1e-08	29.6	26084	27256	GCA_009939745.1|CP039761.1	41	0.15601023017902813	0.2147887323943662	1
NYN_0_CAS-III-B	GCA_009939745.1|CP039761.1_386	112	320	0.15	7.5	222217	222552	GCA_009939745.1|CP039761.1	386	0.6607142857142857	0.228125	1
RecD_0_IVD	GCA_009939745.1|CP039761.1_1278	596	763	6.3e-05	17.6	742599	744386	GCA_009939745.1|CP039761.1	1278	0.18120805369127516	0.14154652686762778	-1
RecD_0_IVD	GCA_009939745.1|CP039761.1_1291	114	763	2.9e-05	18.7	751892	752233	GCA_009939745.1|CP039761.1	1291	0.6491228070175439	0.0891218872870249	1
RecD_0_IVD	GCA_009939745.1|CP039761.1_517	74	763	0.0054	11.2	296045	296266	GCA_009939745.1|CP039761.1	517	0.4189189189189189	0.039318479685452164	1
RecD_0_IVD	GCA_009939745.1|CP039761.1_699	506	763	3.8e-09	31.5	402247	403764	GCA_009939745.1|CP039761.1	699	0.41699604743083	0.2516382699868938	1
RecD_0_IVD	GCA_009939745.1|CP039761.1_895	310	763	0.006	11.0	517981	518910	GCA_009939745.1|CP039761.1	895	0.08387096774193549	0.03407601572739188	-1
STAND_TPR_0_CAS-I-E	GCA_009939745.1|CP039761.1_1105	322	1210	0.0023	12.2	647704	648669	GCA_009939745.1|CP039761.1	1105	0.4813664596273292	0.128099173553719	-1
Unk_03_0_CAS-III-B	GCA_009939745.1|CP039761.1_648	167	186	1.6	5.2	368750	369250	GCA_009939745.1|CP039761.1	648	0.7065868263473054	0.6290322580645161	1