Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_1124	140	284	3.6e-06	23.1	657560	657979	GCA_009946845.1|CP039786.1	1124	0.2785714285714286	0.12323943661971831	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_1383	195	284	0.0017	14.3	805998	806582	GCA_009946845.1|CP039786.1	1383	0.4512820512820513	0.29225352112676056	-1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_1392	222	284	4.9e-05	19.4	812679	813344	GCA_009946845.1|CP039786.1	1392	0.44144144144144143	0.3274647887323944	-1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_177	464	284	0.00013	17.9	100562	101953	GCA_009946845.1|CP039786.1	177	0.28448275862068967	0.44366197183098594	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_31	94	284	0.0022	14.0	22232	22513	GCA_009946845.1|CP039786.1	31	0.24468085106382978	0.07746478873239436	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_405	272	284	0.00024	17.1	232736	233551	GCA_009946845.1|CP039786.1	405	0.46691176470588236	0.47183098591549294	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_470	190	284	0.0026	13.7	271370	271939	GCA_009946845.1|CP039786.1	470	0.28421052631578947	0.18661971830985916	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_539	308	284	0.0016	14.4	307963	308886	GCA_009946845.1|CP039786.1	539	0.41883116883116883	0.45774647887323944	1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_890	150	284	8.4e-05	18.6	514126	514575	GCA_009946845.1|CP039786.1	890	0.18666666666666668	0.09859154929577464	-1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_899	310	284	4.7e-07	26.0	519857	520786	GCA_009946845.1|CP039786.1	899	0.3419354838709677	0.3591549295774648	-1
AbiEii_0_CAS-III	GCA_009946845.1|CP039786.1_900	237	284	0.00017	17.6	521002	521712	GCA_009946845.1|CP039786.1	900	0.39662447257383965	0.31338028169014087	-1
AbiEii_1_CAS-III-A	GCA_009946845.1|CP039786.1_1244	123	335	0.00078	15.0	729359	729727	GCA_009946845.1|CP039786.1	1244	0.5447154471544715	0.1880597014925373	-1
AbiEii_1_CAS-III-A	GCA_009946845.1|CP039786.1_890	150	335	0.0099	11.4	514126	514575	GCA_009946845.1|CP039786.1	890	0.24666666666666667	0.10746268656716418	-1
Cas11_1_IV	GCA_009946845.1|CP039786.1_15	87	122	0.0059	13.3	12392	12652	GCA_009946845.1|CP039786.1	15	0.7586206896551724	0.5163934426229508	1
Cas11_1_IV	GCA_009946845.1|CP039786.1_594	249	122	7.9	3.2	340491	341237	GCA_009946845.1|CP039786.1	594	0.1285140562248996	0.26229508196721313	1
Cas12m_0_V-M	GCA_009946845.1|CP039786.1_468	330	577	0.12	7.1	270188	271177	GCA_009946845.1|CP039786.1	468	0.2515151515151515	0.14558058925476602	1
Cas3HD_0_CAS-I	GCA_009946845.1|CP039786.1_1373	377	203	0.00097	15.3	801009	802139	GCA_009946845.1|CP039786.1	1373	0.21220159151193635	0.41379310344827586	-1
Cas3HD_0_CAS-I	GCA_009946845.1|CP039786.1_561	438	203	2.4e-06	23.9	319649	320962	GCA_009946845.1|CP039786.1	561	0.3858447488584475	0.812807881773399	1
Cas3HD_0_CAS-I	GCA_009946845.1|CP039786.1_687	116	203	0.003	13.7	398731	399078	GCA_009946845.1|CP039786.1	687	0.3103448275862069	0.21674876847290642	-1
Cas3_0_CAS-I	GCA_009946845.1|CP039786.1_1124	140	353	0.011	11.2	657560	657979	GCA_009946845.1|CP039786.1	1124	0.30714285714285716	0.12181303116147309	1
Cas3_0_CAS-I	GCA_009946845.1|CP039786.1_1280	114	353	0.00012	17.6	749976	750317	GCA_009946845.1|CP039786.1	1280	0.5263157894736842	0.16147308781869688	1
Cas3_0_CAS-I	GCA_009946845.1|CP039786.1_928	152	353	0.00021	16.8	537231	537686	GCA_009946845.1|CP039786.1	928	0.6513157894736842	0.2719546742209632	-1
Cas3_0_I	GCA_009946845.1|CP039786.1_1124	140	358	0.0013	14.2	657560	657979	GCA_009946845.1|CP039786.1	1124	0.37857142857142856	0.1452513966480447	1
Cas3_0_I	GCA_009946845.1|CP039786.1_1280	114	358	0.0023	13.4	749976	750317	GCA_009946845.1|CP039786.1	1280	0.4649122807017544	0.13966480446927373	1
Cas3_0_I	GCA_009946845.1|CP039786.1_928	152	358	0.00014	17.4	537231	537686	GCA_009946845.1|CP039786.1	928	0.631578947368421	0.25977653631284914	-1
Cas3_0_ID	GCA_009946845.1|CP039786.1_1280	114	357	0.004	12.6	749976	750317	GCA_009946845.1|CP039786.1	1280	0.4649122807017544	0.13445378151260504	1
Cas3_1_CAS-I	GCA_009946845.1|CP039786.1_1280	114	745	5.1e-07	24.7	749976	750317	GCA_009946845.1|CP039786.1	1280	0.5614035087719298	0.08456375838926175	1
Cas3_1_CAS-I	GCA_009946845.1|CP039786.1_928	152	745	0.00062	14.5	537231	537686	GCA_009946845.1|CP039786.1	928	0.26973684210526316	0.05771812080536913	-1
Cas3_1_CAS-I-D	GCA_009946845.1|CP039786.1_1280	114	353	0.00073	15.0	749976	750317	GCA_009946845.1|CP039786.1	1280	0.49122807017543857	0.14447592067988668	1
Cas3_1_I	GCA_009946845.1|CP039786.1_1373	377	178	0.0047	13.3	801009	802139	GCA_009946845.1|CP039786.1	1373	0.3076923076923077	0.5337078651685393	-1
Cas3_1_I	GCA_009946845.1|CP039786.1_561	438	178	0.0059	13.0	319649	320962	GCA_009946845.1|CP039786.1	561	0.273972602739726	0.8089887640449438	1
Cas3_2_CAS-I	GCA_009946845.1|CP039786.1_1280	114	967	0.0011	13.4	749976	750317	GCA_009946845.1|CP039786.1	1280	0.7280701754385965	0.0827300930713547	1
Cas3d_1_CAS-I-D	GCA_009946845.1|CP039786.1_1280	114	627	0.0025	12.4	749976	750317	GCA_009946845.1|CP039786.1	1280	0.45614035087719296	0.0685805422647528	1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_1362	346	210	0.0042	13.5	792839	793876	GCA_009946845.1|CP039786.1	1362	0.2832369942196532	0.45714285714285713	-1
Cas6e_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_992	170	210	0.0031	13.9	581476	581985	GCA_009946845.1|CP039786.1	992	0.5294117647058824	0.3952380952380952	-1
Cas6f_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_1206	121	186	0.0023	14.2	705629	705991	GCA_009946845.1|CP039786.1	1206	0.6611570247933884	0.41935483870967744	-1
Cas7_0_CAS-I-C	GCA_009946845.1|CP039786.1_616	150	268	0.0057	12.5	352026	352475	GCA_009946845.1|CP039786.1	616	0.4066666666666667	0.22761194029850745	1
Cas7_1_CAS-I-E	GCA_009946845.1|CP039786.1_218	128	359	0.015	11.0	129573	129956	GCA_009946845.1|CP039786.1	218	0.5625	0.1977715877437326	1
Cas7_1_CAS-I-E	GCA_009946845.1|CP039786.1_976	121	359	0.012	11.4	568828	569190	GCA_009946845.1|CP039786.1	976	0.7024793388429752	0.233983286908078	1
Cas7_3_IB	GCA_009946845.1|CP039786.1_616	150	268	0.0036	13.2	352026	352475	GCA_009946845.1|CP039786.1	616	0.6	0.3358208955223881	1
Cas8a1_3_CAS-I-A	GCA_009946845.1|CP039786.1_598	166	400	0.0053	12.2	342883	343380	GCA_009946845.1|CP039786.1	598	0.3433734939759036	0.1425	1
Cas8b5_0_CAS-I-B	GCA_009946845.1|CP039786.1_304	111	825	0.02	9.2	178323	178655	GCA_009946845.1|CP039786.1	304	0.7117117117117117	0.10424242424242425	-1
Cas9_0_II-C2	GCA_009946845.1|CP039786.1_389	61	967	0.049	8.0	224826	225008	GCA_009946845.1|CP039786.1	389	0.8360655737704918	0.045501551189245086	1
Cas9_0_II-D	GCA_009946845.1|CP039786.1_871	141	853	0.0034	12.1	503332	503754	GCA_009946845.1|CP039786.1	871	0.19858156028368795	0.031652989449003514	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_1125	149	198	0.00067	15.7	658037	658483	GCA_009946845.1|CP039786.1	1125	0.5570469798657718	0.2727272727272727	1
CasR_0_CAS-III-B-III-D	GCA_009946845.1|CP039786.1_947	107	255	0.00055	15.9	549966	550286	GCA_009946845.1|CP039786.1	947	0.6822429906542056	0.2980392156862745	-1
CasR_0_CAS-III-B-III-D	GCA_009946845.1|CP039786.1_955	174	255	0.2	7.5	554590	555111	GCA_009946845.1|CP039786.1	955	0.7126436781609196	0.26666666666666666	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_1125	149	218	0.00023	16.7	658037	658483	GCA_009946845.1|CP039786.1	1125	0.6375838926174496	0.28440366972477066	1
Cmr1gr7_5_CAS-III-B-III-C	GCA_009946845.1|CP039786.1_1234	125	340	0.0068	12.3	723945	724319	GCA_009946845.1|CP039786.1	1234	0.688	0.25882352941176473	-1
Cmr5gr11_10_CAS-III-B	GCA_009946845.1|CP039786.1_435	93	146	0.0013	15.2	247766	248044	GCA_009946845.1|CP039786.1	435	0.4946236559139785	0.3150684931506849	1
Cmr5gr11_10_CAS-III-B	GCA_009946845.1|CP039786.1_853	93	146	0.00096	15.6	494895	495173	GCA_009946845.1|CP039786.1	853	0.5161290322580645	0.3287671232876712	1
Cmr5gr11_2_CAS-III-B	GCA_009946845.1|CP039786.1_244	56	138	0.0036	13.9	144358	144525	GCA_009946845.1|CP039786.1	244	0.8392857142857143	0.34057971014492755	1
Cmr5gr11_2_CAS-III-B	GCA_009946845.1|CP039786.1_929	343	138	0.02	11.5	537795	538823	GCA_009946845.1|CP039786.1	929	0.27405247813411077	0.5217391304347826	-1
Cmr5gr11_3_CAS-III-B	GCA_009946845.1|CP039786.1_1279	87	119	0.0048	13.7	749558	749818	GCA_009946845.1|CP039786.1	1279	0.4827586206896552	0.35294117647058826	-1
CorA_1_CAS-III-B	GCA_009946845.1|CP039786.1_304	111	125	0.00024	17.4	178323	178655	GCA_009946845.1|CP039786.1	304	0.5135135135135135	0.464	-1
CorA_1_CAS-III-B	GCA_009946845.1|CP039786.1_757	125	125	0.0014	14.9	439419	439793	GCA_009946845.1|CP039786.1	757	0.632	0.376	1
Csc2_0_ID	GCA_009946845.1|CP039786.1_1153	87	282	0.0028	13.3	673136	673396	GCA_009946845.1|CP039786.1	1153	0.4367816091954023	0.1347517730496454	-1
Csf2_1_IVA3	GCA_009946845.1|CP039786.1_1234	125	263	0.27	6.8	723945	724319	GCA_009946845.1|CP039786.1	1234	0.528	0.24714828897338403	-1
Csf2_1_IVA3	GCA_009946845.1|CP039786.1_678	454	263	0.0022	13.6	391445	392806	GCA_009946845.1|CP039786.1	678	0.21365638766519823	0.376425855513308	1
Csf4_0_IVA	GCA_009946845.1|CP039786.1_1280	114	666	0.0023	12.9	749976	750317	GCA_009946845.1|CP039786.1	1280	0.4473684210526316	0.07207207207207207	1
Csf4_0_IVA	GCA_009946845.1|CP039786.1_928	152	666	1e-06	23.9	537231	537686	GCA_009946845.1|CP039786.1	928	0.4276315789473684	0.0960960960960961	-1
Csm4_1_IIIA	GCA_009946845.1|CP039786.1_647	167	319	0.00066	15.2	370515	371015	GCA_009946845.1|CP039786.1	647	0.49101796407185627	0.2445141065830721	1
Csm4gr5_0_CAS-III-A-III-D	GCA_009946845.1|CP039786.1_85	155	317	0.018	10.6	50094	50558	GCA_009946845.1|CP039786.1	85	0.36774193548387096	0.1829652996845426	1
Csm4gr5_1_CAS-III-A	GCA_009946845.1|CP039786.1_647	167	315	0.00068	15.3	370515	371015	GCA_009946845.1|CP039786.1	647	0.46107784431137727	0.23174603174603176	1
Csm5gr7_2_CAS-III-A-III-D	GCA_009946845.1|CP039786.1_647	167	258	0.28	6.9	370515	371015	GCA_009946845.1|CP039786.1	647	0.5688622754491018	0.2868217054263566	1
Csn2_1_CAS-II-A	GCA_009946845.1|CP039786.1_648	358	218	0.0022	14.0	371030	372103	GCA_009946845.1|CP039786.1	648	0.25977653631284914	0.24311926605504589	1
Csn2_7_CAS-II-A	GCA_009946845.1|CP039786.1_405	272	372	0.0044	12.4	232736	233551	GCA_009946845.1|CP039786.1	405	0.16911764705882354	0.12365591397849462	1
Csn2_7_CAS-II-A	GCA_009946845.1|CP039786.1_865	101	372	0.0008	14.8	500976	501278	GCA_009946845.1|CP039786.1	865	0.5346534653465347	0.1478494623655914	1
Csx19_8_CAS-III-D	GCA_009946845.1|CP039786.1_1053	78	148	0.0032	14.2	612924	613157	GCA_009946845.1|CP039786.1	1053	0.6282051282051282	0.3108108108108108	1
Csx1_13_CAS-III	GCA_009946845.1|CP039786.1_296	190	426	0.0017	13.7	174016	174585	GCA_009946845.1|CP039786.1	296	0.3631578947368421	0.15258215962441316	1
Csx1_6_CAS-III	GCA_009946845.1|CP039786.1_780	75	406	0.0012	14.3	453454	453678	GCA_009946845.1|CP039786.1	780	0.5733333333333334	0.0960591133004926	1
Csx3_2_CAS-I-III	GCA_009946845.1|CP039786.1_1170	389	277	0.00059	15.3	683267	684433	GCA_009946845.1|CP039786.1	1170	0.10025706940874037	0.1407942238267148	-1
Csx3_2_CAS-I-III	GCA_009946845.1|CP039786.1_678	454	277	0.00086	14.8	391445	392806	GCA_009946845.1|CP039786.1	678	0.08370044052863436	0.1299638989169675	1
Csx3_2_CAS-I-III	GCA_009946845.1|CP039786.1_990	300	277	3e-05	19.6	579895	580794	GCA_009946845.1|CP039786.1	990	0.2833333333333333	0.22743682310469315	-1
CysH_0_IVB	GCA_009946845.1|CP039786.1_884	89	249	0.0061	12.6	509630	509896	GCA_009946845.1|CP039786.1	884	0.4157303370786517	0.14859437751004015	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_66	264	160	1.8e-17	60.3	38874	39665	GCA_009946845.1|CP039786.1	66	0.29924242424242425	0.4875	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_009946845.1|CP039786.1_67	154	160	3.8e-15	52.8	39681	40142	GCA_009946845.1|CP039786.1	67	0.474025974025974	0.4625	-1
Mem_DnaJ_0_CAS-III-AM	GCA_009946845.1|CP039786.1_40	391	284	1.6e-08	30.6	26159	27331	GCA_009946845.1|CP039786.1	40	0.15601023017902813	0.2147887323943662	1
NYN_0_CAS-III-B	GCA_009946845.1|CP039786.1_387	112	320	0.15	7.5	223944	224279	GCA_009946845.1|CP039786.1	387	0.6607142857142857	0.228125	1
RecD_0_IVD	GCA_009946845.1|CP039786.1_1268	596	763	6.3e-05	17.6	740683	742470	GCA_009946845.1|CP039786.1	1268	0.18120805369127516	0.14154652686762778	-1
RecD_0_IVD	GCA_009946845.1|CP039786.1_1280	114	763	2.8e-05	18.7	749976	750317	GCA_009946845.1|CP039786.1	1280	0.6491228070175439	0.0891218872870249	1
RecD_0_IVD	GCA_009946845.1|CP039786.1_519	74	763	0.0053	11.2	297706	297927	GCA_009946845.1|CP039786.1	519	0.4189189189189189	0.039318479685452164	1
RecD_0_IVD	GCA_009946845.1|CP039786.1_698	506	763	9.5e-09	30.2	404012	405529	GCA_009946845.1|CP039786.1	698	0.41699604743083	0.2516382699868938	1
RecD_0_IVD	GCA_009946845.1|CP039786.1_899	310	763	0.006	11.0	519857	520786	GCA_009946845.1|CP039786.1	899	0.08387096774193549	0.03407601572739188	-1
STAND_TPR_0_CAS-I-E	GCA_009946845.1|CP039786.1_1116	322	1210	0.0026	12.0	653027	653992	GCA_009946845.1|CP039786.1	1116	0.40372670807453415	0.09421487603305785	-1
Unk_03_0_CAS-III-B	GCA_009946845.1|CP039786.1_647	167	186	1.5	5.2	370515	371015	GCA_009946845.1|CP039786.1	647	0.7065868263473054	0.6290322580645161	1