Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_130	506	284	0.00011	17.6	128700	130217	GCA_013098515.1|CP039997.1	130	0.08300395256916997	0.1443661971830986	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_191	352	284	0.00015	17.1	197604	198659	GCA_013098515.1|CP039997.1	191	0.19886363636363635	0.28169014084507044	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_206	233	284	0.0002	16.7	210562	211260	GCA_013098515.1|CP039997.1	206	0.40772532188841204	0.3485915492957746	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_210	282	284	2.7e-05	19.5	213988	214833	GCA_013098515.1|CP039997.1	210	0.2624113475177305	0.25	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_223	230	284	0.00018	16.9	227901	228590	GCA_013098515.1|CP039997.1	223	0.40869565217391307	0.30633802816901406	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_286	210	284	0.00072	14.8	289491	290120	GCA_013098515.1|CP039997.1	286	0.47619047619047616	0.3380281690140845	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_309	255	284	0.00075	14.8	307952	308716	GCA_013098515.1|CP039997.1	309	0.396078431372549	0.3380281690140845	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_324	253	284	0.00016	17.0	323202	323960	GCA_013098515.1|CP039997.1	324	0.3438735177865613	0.30985915492957744	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_351	624	284	4.2e-05	18.9	346473	348344	GCA_013098515.1|CP039997.1	351	0.20993589743589744	0.2676056338028169	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_46	395	284	8.4e-05	17.9	50946	52130	GCA_013098515.1|CP039997.1	46	0.26582278481012656	0.3591549295774648	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_479	392	284	9.6e-05	17.7	458449	459624	GCA_013098515.1|CP039997.1	479	0.17346938775510204	0.23591549295774647	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_577	242	284	4.6e-08	28.6	555592	556317	GCA_013098515.1|CP039997.1	577	0.36363636363636365	0.2992957746478873	1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_636	239	284	2.2e-06	23.1	618153	618869	GCA_013098515.1|CP039997.1	636	0.38493723849372385	0.3204225352112676	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_698	334	284	0.0011	14.2	674330	675331	GCA_013098515.1|CP039997.1	698	0.0688622754491018	0.08098591549295775	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_767	255	284	2.5e-08	29.5	736393	737157	GCA_013098515.1|CP039997.1	767	0.4823529411764706	0.3873239436619718	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_784	374	284	8.5e-05	17.9	753218	754339	GCA_013098515.1|CP039997.1	784	0.22994652406417113	0.30633802816901406	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_791	260	284	8e-08	27.8	759363	760142	GCA_013098515.1|CP039997.1	791	0.5423076923076923	0.4964788732394366	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_800	243	284	1.8e-07	26.7	770208	770936	GCA_013098515.1|CP039997.1	800	0.5596707818930041	0.4612676056338028	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_824	302	284	3.7e-06	22.4	798684	799589	GCA_013098515.1|CP039997.1	824	0.3211920529801324	0.31690140845070425	-1
AbiEii_0_CAS-III	GCA_013098515.1|CP039997.1_860	387	284	7.8e-05	18.0	833949	835109	GCA_013098515.1|CP039997.1	860	0.35917312661498707	0.4753521126760563	-1
AbiEii_1_CAS-III-A	GCA_013098515.1|CP039997.1_791	260	335	2.8e-05	19.1	759363	760142	GCA_013098515.1|CP039997.1	791	0.38076923076923075	0.3074626865671642	-1
AbiEii_2_CAS-III-C	GCA_013098515.1|CP039997.1_791	260	440	0.00062	14.7	759363	760142	GCA_013098515.1|CP039997.1	791	0.3076923076923077	0.18409090909090908	-1
Cas12d_0_CAS-V-D	GCA_013098515.1|CP039997.1_703	178	1163	0.0065	9.9	680305	680838	GCA_013098515.1|CP039997.1	703	0.29213483146067415	0.04471195184866724	-1
Cas13b_0_CAS-VI-B	GCA_013098515.1|CP039997.1_685	384	1142	0.00039	14.2	664171	665322	GCA_013098515.1|CP039997.1	685	0.09635416666666667	0.03415061295971979	1
Cas13b_1_VIB2	GCA_013098515.1|CP039997.1_685	384	1142	0.00038	14.3	664171	665322	GCA_013098515.1|CP039997.1	685	0.09635416666666667	0.03415061295971979	1
Cas3HD_0_CAS-I	GCA_013098515.1|CP039997.1_673	497	203	0.00038	16.0	654307	655797	GCA_013098515.1|CP039997.1	673	0.16901408450704225	0.458128078817734	-1
Cas3_0_CAS-I	GCA_013098515.1|CP039997.1_153	648	353	0.00026	15.9	162048	163991	GCA_013098515.1|CP039997.1	153	0.15432098765432098	0.22662889518413598	-1
Cas3_0_CAS-I	GCA_013098515.1|CP039997.1_495	681	353	1.4e-05	20.0	473538	475580	GCA_013098515.1|CP039997.1	495	0.19530102790014683	0.38243626062322944	-1
Cas3_0_I	GCA_013098515.1|CP039997.1_153	648	358	2.9e-05	19.0	162048	163991	GCA_013098515.1|CP039997.1	153	0.1527777777777778	0.2569832402234637	-1
Cas3_0_I	GCA_013098515.1|CP039997.1_495	681	358	1.7e-05	19.7	473538	475580	GCA_013098515.1|CP039997.1	495	0.18795888399412627	0.36033519553072624	-1
Cas3_0_ID	GCA_013098515.1|CP039997.1_38	305	357	0.00085	14.1	42617	43531	GCA_013098515.1|CP039997.1	38	0.13114754098360656	0.11484593837535013	1
Cas3_0_ID	GCA_013098515.1|CP039997.1_495	681	357	0.00017	16.5	473538	475580	GCA_013098515.1|CP039997.1	495	0.1527165932452276	0.2773109243697479	-1
Cas3_1_CAS-I	GCA_013098515.1|CP039997.1_495	681	745	0.0014	12.7	473538	475580	GCA_013098515.1|CP039997.1	495	0.17327459618208516	0.1476510067114094	-1
Cas3_1_CAS-I-D	GCA_013098515.1|CP039997.1_38	305	353	0.00081	14.2	42617	43531	GCA_013098515.1|CP039997.1	38	0.2819672131147541	0.19830028328611898	1
Cas3_1_CAS-I-D	GCA_013098515.1|CP039997.1_495	681	353	0.00015	16.6	473538	475580	GCA_013098515.1|CP039997.1	495	0.14977973568281938	0.2747875354107649	-1
Cas3_1_I	GCA_013098515.1|CP039997.1_673	497	178	0.00058	15.6	654307	655797	GCA_013098515.1|CP039997.1	673	0.11871227364185111	0.3707865168539326	-1
Cas3_2_CAS-I	GCA_013098515.1|CP039997.1_495	681	967	7.5e-05	16.6	473538	475580	GCA_013098515.1|CP039997.1	495	0.1512481644640235	0.0703205791106515	-1
Cas3d_0_CAS-I-D	GCA_013098515.1|CP039997.1_597	657	639	0.00014	16.0	577242	579212	GCA_013098515.1|CP039997.1	597	0.1841704718417047	0.17214397496087636	-1
Cas6e_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_386	187	212	0.0044	12.8	383047	383607	GCA_013098515.1|CP039997.1	386	0.45989304812834225	0.33962264150943394	-1
Cas7_1_IB	GCA_013098515.1|CP039997.1_770	303	321	0.0049	11.6	738653	739561	GCA_013098515.1|CP039997.1	770	0.2508250825082508	0.1806853582554517	-1
Cas8u1_0_CAS-I-U	GCA_013098515.1|CP039997.1_224	334	702	0.00084	13.6	228587	229588	GCA_013098515.1|CP039997.1	224	0.30538922155688625	0.13817663817663817	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_154	101	198	0.00022	16.6	164158	164460	GCA_013098515.1|CP039997.1	154	0.37623762376237624	0.18686868686868688	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_719	237	198	0.00036	15.8	696837	697547	GCA_013098515.1|CP039997.1	719	0.24050632911392406	0.29292929292929293	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_831	91	198	1.2e-05	20.7	804161	804433	GCA_013098515.1|CP039997.1	831	0.5714285714285714	0.26262626262626265	-1
CasR_0_CAS-III-B-III-D	GCA_013098515.1|CP039997.1_771	306	255	0.95	4.6	739576	740493	GCA_013098515.1|CP039997.1	771	0.28104575163398693	0.2235294117647059	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_154	101	218	0.00033	15.5	164158	164460	GCA_013098515.1|CP039997.1	154	0.3465346534653465	0.16055045871559634	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_719	237	218	0.00053	14.9	696837	697547	GCA_013098515.1|CP039997.1	719	0.11814345991561181	0.12844036697247707	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_727	406	218	0.0072	11.2	703383	704600	GCA_013098515.1|CP039997.1	727	0.17980295566502463	0.1926605504587156	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_831	91	218	2.1e-06	22.7	804161	804433	GCA_013098515.1|CP039997.1	831	0.5714285714285714	0.23853211009174313	-1
Cmr1gr7_6_CAS-III-B-III-C	GCA_013098515.1|CP039997.1_523	357	81	0.047	9.9	504263	505333	GCA_013098515.1|CP039997.1	523	0.22969187675070027	0.9135802469135802	-1
Cmr5gr11_1_CAS-III-C	GCA_013098515.1|CP039997.1_523	357	180	0.0021	13.6	504263	505333	GCA_013098515.1|CP039997.1	523	0.4369747899159664	0.4722222222222222	-1
CorA_0_CAS-III-B-III-D	GCA_013098515.1|CP039997.1_762	307	551	2.9e-05	18.6	730338	731258	GCA_013098515.1|CP039997.1	762	0.2964169381107492	0.16515426497277677	-1
CorA_0_CAS-III-B-III-D	GCA_013098515.1|CP039997.1_770	303	551	6.9e-06	20.7	738653	739561	GCA_013098515.1|CP039997.1	770	0.2145214521452145	0.11252268602540835	-1
CorA_1_CAS-III-B	GCA_013098515.1|CP039997.1_798	714	125	0.22	7.1	765679	767820	GCA_013098515.1|CP039997.1	798	0.12605042016806722	0.576	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_154	101	118	0.0022	14.0	164158	164460	GCA_013098515.1|CP039997.1	154	0.38613861386138615	0.3559322033898305	1
Csf2_1_IVA3	GCA_013098515.1|CP039997.1_193	185	263	0.6	5.0	199449	200003	GCA_013098515.1|CP039997.1	193	0.4	0.2661596958174905	1
Csf4_1_IVA1	GCA_013098515.1|CP039997.1_153	648	802	0.00041	14.3	162048	163991	GCA_013098515.1|CP039997.1	153	0.06944444444444445	0.057356608478802994	-1
Csn2_7_CAS-II-A	GCA_013098515.1|CP039997.1_223	230	372	0.00071	14.3	227901	228590	GCA_013098515.1|CP039997.1	223	0.32608695652173914	0.20967741935483872	1
Csn2_7_CAS-II-A	GCA_013098515.1|CP039997.1_324	253	372	0.012	10.2	323202	323960	GCA_013098515.1|CP039997.1	324	0.2608695652173913	0.1827956989247312	-1
Csx21_0_CAS-III-A	GCA_013098515.1|CP039997.1_147	357	210	0.0011	14.1	155145	156215	GCA_013098515.1|CP039997.1	147	0.31092436974789917	0.2904761904761905	1
Csx21_0_CAS-III-A-III-D	GCA_013098515.1|CP039997.1_147	357	210	0.0017	13.6	155145	156215	GCA_013098515.1|CP039997.1	147	0.3333333333333333	0.2904761904761905	1
Csx3_2_CAS-I-III	GCA_013098515.1|CP039997.1_130	506	277	0.00046	15.0	128700	130217	GCA_013098515.1|CP039997.1	130	0.05138339920948617	0.09386281588447654	-1
Csx3_2_CAS-I-III	GCA_013098515.1|CP039997.1_317	560	277	0.00021	16.2	315099	316778	GCA_013098515.1|CP039997.1	317	0.10714285714285714	0.1299638989169675	-1
Csx3_3_CAS-I-III	GCA_013098515.1|CP039997.1_838	505	79	0.05	9.2	809754	811268	GCA_013098515.1|CP039997.1	838	0.07326732673267326	0.25316455696202533	1
CysH_0_IVB	GCA_013098515.1|CP039997.1_541	388	249	0.0019	13.6	520908	522071	GCA_013098515.1|CP039997.1	541	0.17010309278350516	0.2570281124497992	-1
CysH_0_IVB	GCA_013098515.1|CP039997.1_736	282	249	0.0021	13.4	712649	713494	GCA_013098515.1|CP039997.1	736	0.12411347517730496	0.13654618473895583	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_476	108	160	0.00069	15.5	454491	454814	GCA_013098515.1|CP039997.1	476	0.75	0.55625	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_60	185	160	2e-08	30.2	63776	64330	GCA_013098515.1|CP039997.1	60	0.7621621621621621	0.76875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013098515.1|CP039997.1_639	472	160	3.7e-19	65.1	620388	621803	GCA_013098515.1|CP039997.1	639	0.3834745762711864	0.98125	-1
RecD_0_IVD	GCA_013098515.1|CP039997.1_254	507	763	1.3e-20	68.8	252718	254238	GCA_013098515.1|CP039997.1	254	0.47337278106508873	0.29882044560943644	1
RecD_0_IVD	GCA_013098515.1|CP039997.1_365	1149	763	0.0015	12.3	359405	362851	GCA_013098515.1|CP039997.1	365	0.13751087902523934	0.18610747051114024	-1
RecD_0_IVD	GCA_013098515.1|CP039997.1_495	681	763	0.0044	10.8	473538	475580	GCA_013098515.1|CP039997.1	495	0.11160058737151249	0.09174311926605505	-1
RecD_0_IVD	GCA_013098515.1|CP039997.1_552	699	763	4e-05	17.5	530998	533094	GCA_013098515.1|CP039997.1	552	0.290414878397711	0.2437745740498034	-1
TPR_0_CAS-III-B	GCA_013098515.1|CP039997.1_61	238	488	0.001	13.5	64417	65130	GCA_013098515.1|CP039997.1	61	0.5966386554621849	0.29508196721311475	1
TPR_0_CAS-III-B	GCA_013098515.1|CP039997.1_714	181	488	0.00074	14.0	692705	693247	GCA_013098515.1|CP039997.1	714	0.3701657458563536	0.14344262295081966	1
TniQ_1_I-F	GCA_013098515.1|CP039997.1_683	114	400	0.0057	11.4	663046	663387	GCA_013098515.1|CP039997.1	683	0.37719298245614036	0.1075	-1
htpX_0_CAS-III-B	GCA_013098515.1|CP039997.1_574	292	343	1.6e-20	69.2	553704	554579	GCA_013098515.1|CP039997.1	574	0.5958904109589042	0.5189504373177842	-1