Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_133	506	284	5.3e-05	18.6	125624	127141	GCA_013099015.1|CP039998.1	133	0.08300395256916997	0.1443661971830986	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_198	352	284	8.6e-05	17.9	197294	198349	GCA_013099015.1|CP039998.1	198	0.26704545454545453	0.647887323943662	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_211	233	284	8.1e-05	18.0	209582	210280	GCA_013099015.1|CP039998.1	211	0.5793991416309013	0.4894366197183099	1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_231	246	284	0.00041	15.7	232332	233069	GCA_013099015.1|CP039998.1	231	0.3821138211382114	0.30633802816901406	1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_293	630	284	6.9e-08	28.1	294106	295995	GCA_013099015.1|CP039998.1	293	0.27936507936507937	0.602112676056338	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_294	210	284	0.00047	15.5	296101	296730	GCA_013099015.1|CP039998.1	294	0.5142857142857142	0.36619718309859156	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_311	255	284	0.00051	15.4	310191	310955	GCA_013099015.1|CP039998.1	311	0.38823529411764707	0.3345070422535211	1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_324	253	284	0.00012	17.5	323878	324636	GCA_013099015.1|CP039998.1	324	0.3557312252964427	0.3204225352112676	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_346	251	284	6.4e-07	24.9	343926	344678	GCA_013099015.1|CP039998.1	346	0.5537848605577689	0.4612676056338028	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_369	627	284	8.1e-05	18.0	366464	368344	GCA_013099015.1|CP039998.1	369	0.14354066985645933	0.24295774647887325	1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_48	385	284	6.3e-05	18.4	49104	50258	GCA_013099015.1|CP039998.1	48	0.2753246753246753	0.3626760563380282	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_498	392	284	0.00018	16.9	482564	483739	GCA_013099015.1|CP039998.1	498	0.12244897959183673	0.16549295774647887	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_589	242	284	5.5e-08	28.4	575963	576688	GCA_013099015.1|CP039998.1	589	0.3512396694214876	0.2887323943661972	1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_735	334	284	0.0012	14.2	716171	717172	GCA_013099015.1|CP039998.1	735	0.0688622754491018	0.08098591549295775	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_805	255	284	4.6e-08	28.7	777627	778391	GCA_013099015.1|CP039998.1	805	0.3607843137254902	0.31338028169014087	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_824	260	284	7e-08	28.1	796688	797467	GCA_013099015.1|CP039998.1	824	0.5576923076923077	0.5	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_833	242	284	8.7e-08	27.8	807581	808306	GCA_013099015.1|CP039998.1	833	0.5619834710743802	0.4612676056338028	-1
AbiEii_0_CAS-III	GCA_013099015.1|CP039998.1_862	302	284	1.5e-06	23.7	840673	841578	GCA_013099015.1|CP039998.1	862	0.33112582781456956	0.3274647887323944	-1
AbiEii_1_CAS-III-A	GCA_013099015.1|CP039998.1_293	630	335	7.6e-07	24.3	294106	295995	GCA_013099015.1|CP039998.1	293	0.2253968253968254	0.4298507462686567	-1
AbiEii_1_CAS-III-A	GCA_013099015.1|CP039998.1_824	260	335	2e-05	19.6	796688	797467	GCA_013099015.1|CP039998.1	824	0.38076923076923075	0.3074626865671642	-1
AbiEii_2_CAS-III-C	GCA_013099015.1|CP039998.1_293	630	440	8.6e-09	30.8	294106	295995	GCA_013099015.1|CP039998.1	293	0.21746031746031746	0.3068181818181818	-1
AbiEii_2_CAS-III-C	GCA_013099015.1|CP039998.1_824	260	440	0.00066	14.7	796688	797467	GCA_013099015.1|CP039998.1	824	0.3076923076923077	0.18409090909090908	-1
Cas13b_0_CAS-VI-B	GCA_013099015.1|CP039998.1_722	384	1142	0.0045	10.8	706862	708013	GCA_013099015.1|CP039998.1	722	0.09635416666666667	0.03415061295971979	1
Cas13b_1_VIB2	GCA_013099015.1|CP039998.1_722	384	1142	0.0044	10.8	706862	708013	GCA_013099015.1|CP039998.1	722	0.09635416666666667	0.03415061295971979	1
Cas3HD_0_CAS-I	GCA_013099015.1|CP039998.1_709	497	203	0.00035	16.2	696331	697821	GCA_013099015.1|CP039998.1	709	0.16700201207243462	0.45320197044334976	-1
Cas3_0_CAS-I	GCA_013099015.1|CP039998.1_160	648	353	0.00093	14.1	160954	162897	GCA_013099015.1|CP039998.1	160	0.15432098765432098	0.2237960339943343	-1
Cas3_0_CAS-I	GCA_013099015.1|CP039998.1_512	681	353	7.9e-06	20.9	495725	497767	GCA_013099015.1|CP039998.1	512	0.19970631424375918	0.3909348441926346	-1
Cas3_0_I	GCA_013099015.1|CP039998.1_160	648	358	3.4e-05	18.8	160954	162897	GCA_013099015.1|CP039998.1	160	0.15895061728395063	0.24022346368715083	-1
Cas3_0_I	GCA_013099015.1|CP039998.1_512	681	358	9.3e-06	20.6	495725	497767	GCA_013099015.1|CP039998.1	512	0.19236417033773862	0.3687150837988827	-1
Cas3_0_ID	GCA_013099015.1|CP039998.1_512	681	357	9.6e-05	17.3	495725	497767	GCA_013099015.1|CP039998.1	512	0.1527165932452276	0.2773109243697479	-1
Cas3_1_CAS-I	GCA_013099015.1|CP039998.1_512	681	745	0.0053	10.8	495725	497767	GCA_013099015.1|CP039998.1	512	0.1512481644640235	0.12751677852348994	-1
Cas3_1_CAS-I-D	GCA_013099015.1|CP039998.1_512	681	353	9.7e-05	17.3	495725	497767	GCA_013099015.1|CP039998.1	512	0.14831130690161526	0.2719546742209632	-1
Cas3_1_I	GCA_013099015.1|CP039998.1_709	497	178	0.00022	17.0	696331	697821	GCA_013099015.1|CP039998.1	709	0.12877263581488935	0.398876404494382	-1
Cas3_2_CAS-I	GCA_013099015.1|CP039998.1_512	681	967	6.5e-05	16.8	495725	497767	GCA_013099015.1|CP039998.1	512	0.1527165932452276	0.0703205791106515	-1
Cas3d_0_CAS-I-D	GCA_013099015.1|CP039998.1_611	657	639	7.8e-05	16.9	598707	600677	GCA_013099015.1|CP039998.1	611	0.182648401826484	0.1705790297339593	-1
Cas5_2_CAS-I-A	GCA_013099015.1|CP039998.1_290	158	233	0.011	11.0	290099	290572	GCA_013099015.1|CP039998.1	290	0.26582278481012656	0.18025751072961374	-1
Cas5f_3_CAS-I-F	GCA_013099015.1|CP039998.1_778	84	293	0.0032	12.6	756181	756432	GCA_013099015.1|CP039998.1	778	0.6071428571428571	0.14675767918088736	1
Cas7_1_IB	GCA_013099015.1|CP039998.1_809	309	321	0.0053	11.5	779894	780820	GCA_013099015.1|CP039998.1	809	0.2459546925566343	0.1806853582554517	-1
Cas7_1_IB	GCA_013099015.1|CP039998.1_870	119	321	0.0023	12.7	846196	846552	GCA_013099015.1|CP039998.1	870	0.42857142857142855	0.16510903426791276	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_161	101	198	0.00023	16.6	163063	163365	GCA_013099015.1|CP039998.1	161	0.37623762376237624	0.18686868686868688	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_755	272	198	0.00049	15.5	737481	738296	GCA_013099015.1|CP039998.1	755	0.11029411764705882	0.15656565656565657	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_869	68	198	0.00085	14.7	845738	845941	GCA_013099015.1|CP039998.1	869	0.7205882352941176	0.2474747474747475	-1
CasR_0_CAS-III-B-III-D	GCA_013099015.1|CP039998.1_733	59	255	0.065	8.4	714155	714331	GCA_013099015.1|CP039998.1	733	0.8135593220338984	0.23137254901960785	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_161	101	218	0.00034	15.5	163063	163365	GCA_013099015.1|CP039998.1	161	0.3465346534653465	0.16055045871559634	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_755	272	218	0.00071	14.5	737481	738296	GCA_013099015.1|CP039998.1	755	0.10294117647058823	0.12844036697247707	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_869	68	218	0.00016	16.6	845738	845941	GCA_013099015.1|CP039998.1	869	0.7352941176470589	0.22935779816513763	-1
Cmr5gr11_1_CAS-III-C	GCA_013099015.1|CP039998.1_538	357	180	0.001	14.7	526965	528035	GCA_013099015.1|CP039998.1	538	0.453781512605042	0.5055555555555555	-1
CorA_0_CAS-III-B-III-D	GCA_013099015.1|CP039998.1_799	307	551	5.8e-06	21.0	771085	772005	GCA_013099015.1|CP039998.1	799	0.2964169381107492	0.16515426497277677	-1
CorA_0_CAS-III-B-III-D	GCA_013099015.1|CP039998.1_809	309	551	7.4e-06	20.6	779894	780820	GCA_013099015.1|CP039998.1	809	0.21035598705501618	0.11252268602540835	-1
CorA_1_CAS-III-B	GCA_013099015.1|CP039998.1_831	714	125	0.076	8.7	803063	805204	GCA_013099015.1|CP039998.1	831	0.12605042016806722	0.576	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_161	101	118	0.0023	14.0	163063	163365	GCA_013099015.1|CP039998.1	161	0.38613861386138615	0.3559322033898305	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_342	124	118	0.0003	16.9	340313	340684	GCA_013099015.1|CP039998.1	342	0.3951612903225806	0.3898305084745763	-1
Csf2_1_IVA3	GCA_013099015.1|CP039998.1_200	185	263	0.72	4.8	199139	199693	GCA_013099015.1|CP039998.1	200	0.4	0.2661596958174905	1
Csf2_1_IVA3	GCA_013099015.1|CP039998.1_57	58	263	0.0035	12.3	56715	56888	GCA_013099015.1|CP039998.1	57	0.6896551724137931	0.14068441064638784	1
Csf4_0_IVA	GCA_013099015.1|CP039998.1_685	834	666	0.00045	14.6	673112	675613	GCA_013099015.1|CP039998.1	685	0.03597122302158273	0.04504504504504504	-1
Csf4_1_IVA1	GCA_013099015.1|CP039998.1_160	648	802	0.00022	15.2	160954	162897	GCA_013099015.1|CP039998.1	160	0.07098765432098765	0.05860349127182045	-1
Csn2_7_CAS-II-A	GCA_013099015.1|CP039998.1_231	246	372	0.00089	14.0	232332	233069	GCA_013099015.1|CP039998.1	231	0.3048780487804878	0.20967741935483872	1
Csn2_7_CAS-II-A	GCA_013099015.1|CP039998.1_805	255	372	0.0015	13.3	777627	778391	GCA_013099015.1|CP039998.1	805	0.5411764705882353	0.3817204301075269	-1
Csx21_0_CAS-III-A	GCA_013099015.1|CP039998.1_153	357	210	0.0011	14.1	153343	154413	GCA_013099015.1|CP039998.1	153	0.31092436974789917	0.2904761904761905	1
Csx21_0_CAS-III-A-III-D	GCA_013099015.1|CP039998.1_153	357	210	0.0018	13.5	153343	154413	GCA_013099015.1|CP039998.1	153	0.33613445378151263	0.2904761904761905	1
Csx21_1_CAS-III-A	GCA_013099015.1|CP039998.1_846	1039	104	0.0021	14.1	820497	823613	GCA_013099015.1|CP039998.1	846	0.10009624639076034	0.7307692307692307	-1
Csx3_2_CAS-I-III	GCA_013099015.1|CP039998.1_133	506	277	0.00037	15.4	125624	127141	GCA_013099015.1|CP039998.1	133	0.0533596837944664	0.09747292418772563	-1
Csx3_2_CAS-I-III	GCA_013099015.1|CP039998.1_317	478	277	0.00011	17.2	315895	317328	GCA_013099015.1|CP039998.1	317	0.12761506276150628	0.13357400722021662	-1
CysH_0_IVB	GCA_013099015.1|CP039998.1_551	410	249	0.00058	15.3	539691	540920	GCA_013099015.1|CP039998.1	551	0.16341463414634147	0.26104417670682734	-1
CysH_0_IVB	GCA_013099015.1|CP039998.1_776	282	249	0.0005	15.5	754987	755832	GCA_013099015.1|CP039998.1	776	0.5354609929078015	0.6184738955823293	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_495	195	160	1.6e-11	40.4	478347	478931	GCA_013099015.1|CP039998.1	495	0.8102564102564103	0.9625	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_64	185	160	1.4e-07	27.5	62818	63372	GCA_013099015.1|CP039998.1	64	0.7621621621621621	0.76875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099015.1|CP039998.1_650	472	160	3e-19	65.5	638485	639900	GCA_013099015.1|CP039998.1	650	0.3834745762711864	0.98125	-1
NYN_0_CAS-III-B	GCA_013099015.1|CP039998.1_850	213	320	2.6e-08	29.1	827050	827688	GCA_013099015.1|CP039998.1	850	0.7511737089201878	0.465625	-1
RecD_0_IVD	GCA_013099015.1|CP039998.1_262	504	763	2.6e-20	67.8	256609	258120	GCA_013099015.1|CP039998.1	262	0.4662698412698413	0.29226736566186107	1
RecD_0_IVD	GCA_013099015.1|CP039998.1_385	1161	763	0.0035	11.2	380095	383577	GCA_013099015.1|CP039998.1	385	0.13522825150732126	0.1834862385321101	-1
RecD_0_IVD	GCA_013099015.1|CP039998.1_512	681	763	0.0061	10.4	495725	497767	GCA_013099015.1|CP039998.1	512	0.1130690161527166	0.09305373525557012	-1
RecD_0_IVD	GCA_013099015.1|CP039998.1_564	700	763	2.9e-06	21.4	551112	553211	GCA_013099015.1|CP039998.1	564	0.3028571428571429	0.25688073394495414	-1
TPR_0_CAS-III-B	GCA_013099015.1|CP039998.1_751	179	488	0.00024	15.7	734136	734672	GCA_013099015.1|CP039998.1	751	0.4748603351955307	0.1721311475409836	1
htpX_0_CAS-III-B	GCA_013099015.1|CP039998.1_586	277	343	8.8e-21	70.1	574076	574906	GCA_013099015.1|CP039998.1	586	0.628158844765343	0.5189504373177842	-1