Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_125	506	284	0.0001	17.7	123738	125255	GCA_013099195.1|CP039999.1	125	0.08300395256916997	0.1443661971830986	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_187	352	284	9.2e-05	17.8	194630	195685	GCA_013099195.1|CP039999.1	187	0.20454545454545456	0.2852112676056338	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_200	233	284	0.00016	17.0	206750	207448	GCA_013099195.1|CP039999.1	200	0.592274678111588	0.5070422535211268	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_204	282	284	1.5e-05	20.4	210163	211008	GCA_013099195.1|CP039999.1	204	0.34397163120567376	0.2746478873239437	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_220	228	284	0.00032	16.0	226380	227063	GCA_013099195.1|CP039999.1	220	0.41228070175438597	0.30633802816901406	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_287	210	284	0.00053	15.3	293854	294483	GCA_013099195.1|CP039999.1	287	0.4857142857142857	0.34507042253521125	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_306	255	284	0.00074	14.8	307413	308177	GCA_013099195.1|CP039999.1	306	0.4	0.34507042253521125	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_319	253	284	0.00017	16.9	321272	322030	GCA_013099195.1|CP039999.1	319	0.3438735177865613	0.30985915492957744	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_338	251	284	9.5e-07	24.3	338816	339568	GCA_013099195.1|CP039999.1	338	0.5577689243027888	0.4647887323943662	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_361	596	284	1.6e-05	20.3	361603	363390	GCA_013099195.1|CP039999.1	361	0.23993288590604026	0.2711267605633803	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_47	383	284	6.2e-05	18.4	49956	51104	GCA_013099195.1|CP039999.1	47	0.27676240208877284	0.3626760563380282	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_479	392	284	7.6e-05	18.1	467243	468418	GCA_013099195.1|CP039999.1	479	0.12244897959183673	0.16549295774647887	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_585	242	284	5.3e-08	28.4	567666	568391	GCA_013099195.1|CP039999.1	585	0.3512396694214876	0.2887323943661972	1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_655	239	284	1.1e-06	24.1	637865	638581	GCA_013099195.1|CP039999.1	655	0.5523012552301255	0.4471830985915493	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_720	333	284	0.0011	14.3	693250	694248	GCA_013099195.1|CP039999.1	720	0.06906906906906907	0.08098591549295775	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_789	255	284	7.8e-08	27.9	756167	756931	GCA_013099195.1|CP039999.1	789	0.36470588235294116	0.31690140845070425	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_805	666	284	0.00056	15.2	772110	774107	GCA_013099195.1|CP039999.1	805	0.08108108108108109	0.19718309859154928	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_811	260	284	7.2e-08	28.0	778291	779070	GCA_013099195.1|CP039999.1	811	0.5384615384615384	0.49295774647887325	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_820	243	284	2.6e-07	26.2	789137	789865	GCA_013099195.1|CP039999.1	820	0.5596707818930041	0.4612676056338028	-1
AbiEii_0_CAS-III	GCA_013099195.1|CP039999.1_842	302	284	6.6e-06	21.6	813047	813952	GCA_013099195.1|CP039999.1	842	0.2251655629139073	0.22535211267605634	-1
AbiEii_1_CAS-III-A	GCA_013099195.1|CP039999.1_811	260	335	0.00014	16.8	778291	779070	GCA_013099195.1|CP039999.1	811	0.3769230769230769	0.3044776119402985	-1
AbiEii_2_CAS-III-C	GCA_013099195.1|CP039999.1_811	260	440	0.00098	14.1	778291	779070	GCA_013099195.1|CP039999.1	811	0.3	0.17954545454545454	-1
Cas10_1_CAS-III	GCA_013099195.1|CP039999.1_694	497	654	4.9e-05	17.7	672683	674173	GCA_013099195.1|CP039999.1	694	0.3702213279678068	0.24464831804281345	-1
Cas13b_0_CAS-VI-B	GCA_013099195.1|CP039999.1_706	384	1142	0.0031	11.3	682548	683699	GCA_013099195.1|CP039999.1	706	0.09635416666666667	0.03415061295971979	1
Cas13b_1_VIB2	GCA_013099195.1|CP039999.1_706	384	1142	0.003	11.3	682548	683699	GCA_013099195.1|CP039999.1	706	0.09635416666666667	0.03415061295971979	1
Cas2_0_I-II-III	GCA_013099195.1|CP039999.1_589	227	96	0.0043	13.0	570805	571485	GCA_013099195.1|CP039999.1	589	0.2643171806167401	0.59375	1
Cas3HD_0_CAS-I	GCA_013099195.1|CP039999.1_694	497	203	0.00029	16.4	672683	674173	GCA_013099195.1|CP039999.1	694	0.1710261569416499	0.4630541871921182	-1
Cas3_0_CAS-I	GCA_013099195.1|CP039999.1_149	648	353	0.00052	14.9	157404	159347	GCA_013099195.1|CP039999.1	149	0.18518518518518517	0.3314447592067989	-1
Cas3_0_CAS-I	GCA_013099195.1|CP039999.1_496	681	353	4.6e-07	24.9	482038	484080	GCA_013099195.1|CP039999.1	496	0.2834067547723935	0.5382436260623229	-1
Cas3_0_I	GCA_013099195.1|CP039999.1_149	648	358	6.1e-05	17.9	157404	159347	GCA_013099195.1|CP039999.1	149	0.19444444444444445	0.34916201117318435	-1
Cas3_0_I	GCA_013099195.1|CP039999.1_496	681	358	7.7e-07	24.2	482038	484080	GCA_013099195.1|CP039999.1	496	0.30983847283406757	0.553072625698324	-1
Cas3_0_ID	GCA_013099195.1|CP039999.1_496	681	357	2.4e-05	19.2	482038	484080	GCA_013099195.1|CP039999.1	496	0.15418502202643172	0.2801120448179272	-1
Cas3_1_CAS-I	GCA_013099195.1|CP039999.1_496	681	745	2e-06	22.0	482038	484080	GCA_013099195.1|CP039999.1	496	0.17327459618208516	0.1476510067114094	-1
Cas3_1_CAS-I	GCA_013099195.1|CP039999.1_827	915	745	8.8e-05	16.6	794488	797232	GCA_013099195.1|CP039999.1	827	0.11366120218579236	0.13288590604026845	-1
Cas3_1_CAS-I-D	GCA_013099195.1|CP039999.1_149	648	353	0.0035	12.1	157404	159347	GCA_013099195.1|CP039999.1	149	0.19444444444444445	0.34844192634560905	-1
Cas3_1_CAS-I-D	GCA_013099195.1|CP039999.1_496	681	353	3.9e-05	18.6	482038	484080	GCA_013099195.1|CP039999.1	496	0.14977973568281938	0.2747875354107649	-1
Cas3_1_I	GCA_013099195.1|CP039999.1_694	497	178	0.00022	17.0	672683	674173	GCA_013099195.1|CP039999.1	694	0.12072434607645875	0.37640449438202245	-1
Cas3_2_CAS-I	GCA_013099195.1|CP039999.1_496	681	967	6.5e-06	20.1	482038	484080	GCA_013099195.1|CP039999.1	496	0.1512481644640235	0.0703205791106515	-1
Cas3d_0_CAS-I-D	GCA_013099195.1|CP039999.1_615	657	639	0.00018	15.7	597051	599021	GCA_013099195.1|CP039999.1	615	0.1841704718417047	0.17214397496087636	-1
Cas7_0_I	GCA_013099195.1|CP039999.1_337	652	240	0.0041	11.9	336877	338832	GCA_013099195.1|CP039999.1	337	0.16717791411042945	0.4375	-1
Cas7_1_IB	GCA_013099195.1|CP039999.1_792	309	321	0.0052	11.5	758447	759373	GCA_013099195.1|CP039999.1	792	0.2459546925566343	0.1806853582554517	-1
Cas8u1_0_CAS-I-U	GCA_013099195.1|CP039999.1_221	334	702	0.00085	13.6	227060	228061	GCA_013099195.1|CP039999.1	221	0.30538922155688625	0.13817663817663817	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_150	101	198	0.00022	16.6	159514	159816	GCA_013099195.1|CP039999.1	150	0.37623762376237624	0.18686868686868688	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_745	237	198	0.0005	15.4	715151	715861	GCA_013099195.1|CP039999.1	745	0.12658227848101267	0.15656565656565657	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_851	91	198	1e-05	21.0	819039	819311	GCA_013099195.1|CP039999.1	851	0.5714285714285714	0.26262626262626265	-1
CasR_0_CAS-III-B-III-D	GCA_013099195.1|CP039999.1_334	102	255	0.068	8.4	334897	335202	GCA_013099195.1|CP039999.1	334	0.7058823529411765	0.19215686274509805	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_150	101	218	0.00034	15.5	159514	159816	GCA_013099195.1|CP039999.1	150	0.3465346534653465	0.16055045871559634	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_745	237	218	0.00063	14.7	715151	715861	GCA_013099195.1|CP039999.1	745	0.11814345991561181	0.12844036697247707	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_851	91	218	1.9e-06	22.9	819039	819311	GCA_013099195.1|CP039999.1	851	0.5714285714285714	0.23853211009174313	-1
CorA_0_CAS-III-B-III-D	GCA_013099195.1|CP039999.1_784	307	551	1.9e-05	19.2	750131	751051	GCA_013099195.1|CP039999.1	784	0.30618892508143325	0.18148820326678766	-1
CorA_0_CAS-III-B-III-D	GCA_013099195.1|CP039999.1_792	309	551	7.3e-06	20.6	758447	759373	GCA_013099195.1|CP039999.1	792	0.21035598705501618	0.11252268602540835	-1
CorA_1_CAS-III-B	GCA_013099195.1|CP039999.1_818	714	125	0.048	9.3	784606	786747	GCA_013099195.1|CP039999.1	818	0.12605042016806722	0.576	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_150	101	118	0.0023	14.0	159514	159816	GCA_013099195.1|CP039999.1	150	0.38613861386138615	0.3559322033898305	1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_335	124	118	0.00029	16.9	335197	335568	GCA_013099195.1|CP039999.1	335	0.3790322580645161	0.3728813559322034	-1
Csf2_1_IVA3	GCA_013099195.1|CP039999.1_189	185	263	0.62	5.0	196478	197032	GCA_013099195.1|CP039999.1	189	0.4	0.2661596958174905	1
Csf4_1_IVA1	GCA_013099195.1|CP039999.1_149	648	802	9.5e-05	16.4	157404	159347	GCA_013099195.1|CP039999.1	149	0.07098765432098765	0.05860349127182045	-1
Csn2_7_CAS-II-A	GCA_013099195.1|CP039999.1_220	228	372	0.00072	14.3	226380	227063	GCA_013099195.1|CP039999.1	220	0.32894736842105265	0.20967741935483872	1
Csn2_7_CAS-II-A	GCA_013099195.1|CP039999.1_319	253	372	0.0066	11.1	321272	322030	GCA_013099195.1|CP039999.1	319	0.2608695652173913	0.1827956989247312	-1
Csn2_7_CAS-II-A	GCA_013099195.1|CP039999.1_655	239	372	0.014	10.1	637865	638581	GCA_013099195.1|CP039999.1	655	0.3807531380753138	0.24193548387096775	-1
Csn2_7_CAS-II-A	GCA_013099195.1|CP039999.1_789	255	372	0.0026	12.5	756167	756931	GCA_013099195.1|CP039999.1	789	0.403921568627451	0.28763440860215056	-1
Csx20_0_CAS-I-III	GCA_013099195.1|CP039999.1_761	423	131	0.0092	11.9	731163	732431	GCA_013099195.1|CP039999.1	761	0.1607565011820331	0.5267175572519084	-1
Csx21_0_CAS-III-A	GCA_013099195.1|CP039999.1_142	357	210	0.0011	14.2	150257	151327	GCA_013099195.1|CP039999.1	142	0.3137254901960784	0.2904761904761905	1
Csx21_0_CAS-III-A-III-D	GCA_013099195.1|CP039999.1_142	357	210	0.0011	14.1	150257	151327	GCA_013099195.1|CP039999.1	142	0.3333333333333333	0.2904761904761905	1
Csx3_2_CAS-I-III	GCA_013099195.1|CP039999.1_125	506	277	0.00045	15.1	123738	125255	GCA_013099195.1|CP039999.1	125	0.05138339920948617	0.09386281588447654	-1
Csx3_2_CAS-I-III	GCA_013099195.1|CP039999.1_312	476	277	0.00015	16.6	313132	314559	GCA_013099195.1|CP039999.1	312	0.12394957983193278	0.1263537906137184	-1
Csx3_3_CAS-I-III	GCA_013099195.1|CP039999.1_858	490	79	0.046	9.4	824693	826162	GCA_013099195.1|CP039999.1	858	0.07551020408163266	0.25316455696202533	1
CysH_0_IVB	GCA_013099195.1|CP039999.1_547	388	249	0.0022	13.4	532095	533258	GCA_013099195.1|CP039999.1	547	0.16494845360824742	0.24899598393574296	-1
CysH_0_IVB	GCA_013099195.1|CP039999.1_755	282	249	0.00088	14.7	726558	727403	GCA_013099195.1|CP039999.1	755	0.1950354609929078	0.21686746987951808	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_476	195	160	4.3e-10	35.7	463025	463609	GCA_013099195.1|CP039999.1	476	0.8051282051282052	0.95625	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_59	184	160	2.6e-09	33.2	62453	63004	GCA_013099195.1|CP039999.1	59	0.7554347826086957	0.7625	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013099195.1|CP039999.1_658	472	160	3.4e-19	65.3	640030	641445	GCA_013099195.1|CP039999.1	658	0.3834745762711864	0.98125	-1
RecD_0_IVD	GCA_013099195.1|CP039999.1_253	507	763	1.2e-20	68.8	251820	253340	GCA_013099195.1|CP039999.1	253	0.4714003944773176	0.29750982961992134	1
RecD_0_IVD	GCA_013099195.1|CP039999.1_375	1139	763	0.0021	11.9	374490	377906	GCA_013099195.1|CP039999.1	375	0.13871817383669885	0.18479685452162517	-1
RecD_0_IVD	GCA_013099195.1|CP039999.1_561	699	763	1.1e-06	22.8	543446	545542	GCA_013099195.1|CP039999.1	561	0.3090128755364807	0.26605504587155965	-1
RecD_0_IVD	GCA_013099195.1|CP039999.1_99	357	763	0.004	10.9	102861	103931	GCA_013099195.1|CP039999.1	99	0.08403361344537816	0.039318479685452164	1
TPR_0_CAS-III-B	GCA_013099195.1|CP039999.1_740	181	488	0.00072	14.1	711041	711583	GCA_013099195.1|CP039999.1	740	0.3701657458563536	0.14344262295081966	1
htpX_0_CAS-III-B	GCA_013099195.1|CP039999.1_582	292	343	2.2e-20	68.8	565779	566654	GCA_013099195.1|CP039999.1	582	0.6952054794520548	0.597667638483965	-1