Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000002.1_147	249	284	0.0017	13.5	128433	129179	GCA_013333595.2|JABCON020000002.1	147	0.40160642570281124	0.3485915492957746	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000002.1_204	252	284	0.0016	13.6	202681	203436	GCA_013333595.2|JABCON020000002.1	204	0.40476190476190477	0.3415492957746479	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000002.1_220	595	284	0.023	9.9	217449	219233	GCA_013333595.2|JABCON020000002.1	220	0.21512605042016808	0.4119718309859155	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000002.1_25	567	284	0.00016	16.9	23874	25574	GCA_013333595.2|JABCON020000002.1	25	0.21869488536155202	0.24295774647887325	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000002.1_73	488	284	0.004	12.4	76684	78147	GCA_013333595.2|JABCON020000002.1	73	0.055327868852459015	0.09507042253521127	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000005.1_27	402	284	0.0012	14.0	29985	31190	GCA_013333595.2|JABCON020000005.1	27	0.2512437810945274	0.3415492957746479	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000005.1_33	347	284	5.9e-05	18.4	36351	37391	GCA_013333595.2|JABCON020000005.1	33	0.069164265129683	0.08450704225352113	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000012.1_1	117	284	0.00013	17.2	3	353	GCA_013333595.2|JABCON020000012.1	1	0.24786324786324787	0.1056338028169014	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000013.1_29	346	284	0.00044	15.5	23786	24823	GCA_013333595.2|JABCON020000013.1	29	0.24566473988439305	0.29577464788732394	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000014.1_12	233	284	7.4e-07	24.6	6932	7630	GCA_013333595.2|JABCON020000014.1	12	0.3562231759656652	0.28169014084507044	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000014.1_30	800	284	0.00012	17.3	28671	31070	GCA_013333595.2|JABCON020000014.1	30	0.1125	0.22535211267605634	-1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000017.1_8	507	284	0.004	12.4	11066	12586	GCA_013333595.2|JABCON020000017.1	8	0.08086785009861933	0.14084507042253522	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000018.1_2	398	284	0.00066	14.9	919	2112	GCA_013333595.2|JABCON020000018.1	2	0.05778894472361809	0.08098591549295775	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000028.1_11	335	284	0.0006	15.0	12709	13713	GCA_013333595.2|JABCON020000028.1	11	0.07164179104477612	0.08450704225352113	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000029.1_1	238	284	5e-05	18.6	32	745	GCA_013333595.2|JABCON020000029.1	1	0.3319327731092437	0.27816901408450706	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000029.1_17	228	284	0.00031	16.0	18596	19279	GCA_013333595.2|JABCON020000029.1	17	0.40350877192982454	0.30633802816901406	1
AbiEii_0_CAS-III	GCA_013333595.2|JABCON020000029.1_5	272	284	0.0017	13.5	3609	4424	GCA_013333595.2|JABCON020000029.1	5	0.21691176470588236	0.20422535211267606	1
AbiEii_1_CAS-III-A	GCA_013333595.2|JABCON020000017.1_61	294	335	0.18	6.5	59068	59949	GCA_013333595.2|JABCON020000017.1	61	0.608843537414966	0.2955223880597015	-1
AbiEii_1_CAS-III-A	GCA_013333595.2|JABCON020000029.1_17	228	335	0.0069	11.1	18596	19279	GCA_013333595.2|JABCON020000029.1	17	0.34649122807017546	0.24477611940298508	1
Cas10_0_IIIA	GCA_013333595.2|JABCON020000014.1_39	167	650	0.0062	10.9	36896	37396	GCA_013333595.2|JABCON020000014.1	39	0.31736526946107785	0.08923076923076922	-1
Cas10_1_CAS-III	GCA_013333595.2|JABCON020000014.1_39	167	654	3.8e-07	24.6	36896	37396	GCA_013333595.2|JABCON020000014.1	39	0.5568862275449101	0.1620795107033639	-1
Cas10_5_CAS-III	GCA_013333595.2|JABCON020000014.1_39	167	838	0.0026	11.6	36896	37396	GCA_013333595.2|JABCON020000014.1	39	0.2215568862275449	0.04892601431980907	-1
Cas3HD_0_CAS-I	GCA_013333595.2|JABCON020000014.1_39	167	203	0.00022	16.7	36896	37396	GCA_013333595.2|JABCON020000014.1	39	0.562874251497006	0.6206896551724138	-1
Cas3HD_0_CAS-I	GCA_013333595.2|JABCON020000028.1_36	367	203	0.00054	15.5	35710	36810	GCA_013333595.2|JABCON020000028.1	36	0.22615803814713897	0.45320197044334976	1
Cas3HD_1_CAS-I	GCA_013333595.2|JABCON020000014.1_39	167	191	0.004	12.6	36896	37396	GCA_013333595.2|JABCON020000014.1	39	0.592814371257485	0.5445026178010471	-1
Cas3_0_CAS-I	GCA_013333595.2|JABCON020000002.1_179	684	353	5.5e-06	21.3	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.1827485380116959	0.3286118980169972	1
Cas3_0_CAS-I	GCA_013333595.2|JABCON020000002.1_32	414	353	1.9e-09	32.7	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.6014492753623188	0.7053824362606232	1
Cas3_0_CAS-I-D	GCA_013333595.2|JABCON020000002.1_32	414	626	0.00019	15.4	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.3671497584541063	0.23162939297124602	1
Cas3_0_I	GCA_013333595.2|JABCON020000002.1_179	684	358	1.5e-05	19.9	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.1652046783625731	0.2905027932960894	1
Cas3_0_I	GCA_013333595.2|JABCON020000002.1_32	414	358	1.1e-09	33.5	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.4855072463768116	0.5726256983240223	1
Cas3_0_ID	GCA_013333595.2|JABCON020000002.1_179	684	357	0.0021	12.8	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.14181286549707603	0.26330532212885155	1
Cas3_0_ID	GCA_013333595.2|JABCON020000002.1_32	414	357	8.7e-05	17.3	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.3502415458937198	0.36694677871148457	1
Cas3_1_CAS-I	GCA_013333595.2|JABCON020000002.1_179	684	745	2.4e-06	21.7	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.12573099415204678	0.11543624161073826	1
Cas3_1_CAS-I	GCA_013333595.2|JABCON020000002.1_188	823	745	0.00056	13.9	184201	186669	GCA_013333595.2|JABCON020000002.1	188	0.1227217496962333	0.13288590604026845	-1
Cas3_1_CAS-I	GCA_013333595.2|JABCON020000002.1_32	414	745	1.8e-06	22.1	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.5024154589371981	0.2993288590604027	1
Cas3_1_CAS-I-D	GCA_013333595.2|JABCON020000002.1_179	684	353	0.0013	13.4	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.14619883040935672	0.2747875354107649	1
Cas3_1_CAS-I-D	GCA_013333595.2|JABCON020000002.1_32	414	353	4.9e-05	18.1	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.321256038647343	0.33994334277620397	1
Cas3_1_I	GCA_013333595.2|JABCON020000028.1_36	367	178	0.0028	13.3	35710	36810	GCA_013333595.2|JABCON020000028.1	36	0.2016348773841962	0.4044943820224719	1
Cas3_2_CAS-I	GCA_013333595.2|JABCON020000002.1_179	684	967	4.9e-06	20.5	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.23976608187134502	0.12719751809720786	1
Cas3_2_CAS-I	GCA_013333595.2|JABCON020000002.1_32	414	967	0.0042	10.8	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.427536231884058	0.1778697001034126	1
Cas3d_1_CAS-I-D	GCA_013333595.2|JABCON020000002.1_32	414	627	8.8e-06	19.8	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.4420289855072464	0.2934609250398724	1
Cas6e_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000008.1_20	453	212	0.0037	12.9	21537	22895	GCA_013333595.2|JABCON020000008.1	20	0.2141280353200883	0.4339622641509434	1
Cas8a6_0_CAS-I-A	GCA_013333595.2|JABCON020000013.1_47	331	375	0.0087	10.7	42715	43707	GCA_013333595.2|JABCON020000013.1	47	0.24471299093655588	0.216	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000003.1_15	136	198	0.00019	16.7	12084	12491	GCA_013333595.2|JABCON020000003.1	15	0.4485294117647059	0.30303030303030304	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000007.1_3	100	198	6.8e-05	18.2	1838	2137	GCA_013333595.2|JABCON020000007.1	3	0.45	0.2222222222222222	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000012.1_16	87	198	6.6e-05	18.2	13578	13838	GCA_013333595.2|JABCON020000012.1	16	0.5517241379310345	0.24242424242424243	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000028.1_3	250	198	0.0021	13.3	1040	1789	GCA_013333595.2|JABCON020000028.1	3	0.12	0.15656565656565657	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000003.1_15	136	218	8e-05	17.5	12084	12491	GCA_013333595.2|JABCON020000003.1	15	0.5	0.3119266055045872	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000007.1_3	100	218	0.00013	16.8	1838	2137	GCA_013333595.2|JABCON020000007.1	3	0.42	0.18807339449541285	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000012.1_16	87	218	4.5e-05	18.3	13578	13838	GCA_013333595.2|JABCON020000012.1	16	0.5632183908045977	0.22477064220183487	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000028.1_3	250	218	0.0027	12.5	1040	1789	GCA_013333595.2|JABCON020000028.1	3	0.112	0.12844036697247707	1
CorA_0_CAS-III-B-III-D	GCA_013333595.2|JABCON020000026.1_5	305	551	1e-05	20.0	2797	3711	GCA_013333595.2|JABCON020000026.1	5	0.21967213114754097	0.12885662431941924	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000003.1_15	136	118	3.1e-14	49.0	12084	12491	GCA_013333595.2|JABCON020000003.1	15	0.5588235294117647	0.6779661016949152	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000005.1_7	132	118	0.0069	12.4	6550	6945	GCA_013333595.2|JABCON020000005.1	7	0.4621212121212121	0.5423728813559322	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000016.1_12	150	118	0.0067	12.5	9037	9486	GCA_013333595.2|JABCON020000016.1	12	0.32666666666666666	0.4152542372881356	1
Csf4_0_IVA	GCA_013333595.2|JABCON020000002.1_32	414	666	8.6e-06	20.1	30015	31256	GCA_013333595.2|JABCON020000002.1	32	0.3888888888888889	0.23123123123123124	1
Csm4_0_IIIA	GCA_013333595.2|JABCON020000002.1_31	186	302	0.0029	12.5	29379	29936	GCA_013333595.2|JABCON020000002.1	31	0.41935483870967744	0.271523178807947	-1
Csm4gr5_0_CAS-III-A	GCA_013333595.2|JABCON020000002.1_31	186	301	0.0071	11.3	29379	29936	GCA_013333595.2|JABCON020000002.1	31	0.3279569892473118	0.2026578073089701	-1
Csm6_2_CAS-III	GCA_013333595.2|JABCON020000002.1_186	451	184	0.0033	12.4	181862	183214	GCA_013333595.2|JABCON020000002.1	186	0.1662971175166297	0.3423913043478261	-1
Csn2_7_CAS-II-A	GCA_013333595.2|JABCON020000005.1_33	347	372	0.00095	13.8	36351	37391	GCA_013333595.2|JABCON020000005.1	33	0.10086455331412104	0.09408602150537634	1
Csn2_7_CAS-II-A	GCA_013333595.2|JABCON020000029.1_17	228	372	0.00051	14.7	18596	19279	GCA_013333595.2|JABCON020000029.1	17	0.3201754385964912	0.19623655913978494	1
Csx16_0_CAS-III-B	GCA_013333595.2|JABCON020000017.1_41	586	105	0.002	14.4	39990	41747	GCA_013333595.2|JABCON020000017.1	41	0.14334470989761092	0.7238095238095238	-1
Csx3_2_CAS-I-III	GCA_013333595.2|JABCON020000014.1_30	800	277	0.00019	16.2	28671	31070	GCA_013333595.2|JABCON020000014.1	30	0.1	0.22382671480144403	-1
Csx3_2_CAS-I-III	GCA_013333595.2|JABCON020000015.1_2	468	277	0.0005	14.9	816	2219	GCA_013333595.2|JABCON020000015.1	2	0.11965811965811966	0.11552346570397112	-1
Csx3_2_CAS-I-III	GCA_013333595.2|JABCON020000017.1_17	298	277	0.0073	11.0	16791	17684	GCA_013333595.2|JABCON020000017.1	17	0.087248322147651	0.09386281588447654	-1
Csx3_2_CAS-I-III	GCA_013333595.2|JABCON020000017.1_54	782	277	0.0062	11.3	50138	52483	GCA_013333595.2|JABCON020000017.1	54	0.043478260869565216	0.12274368231046931	-1
Csx3_2_CAS-I-III	GCA_013333595.2|JABCON020000017.1_8	507	277	0.0021	12.8	11066	12586	GCA_013333595.2|JABCON020000017.1	8	0.10453648915187377	0.19133574007220217	1
CysH_0_IVB	GCA_013333595.2|JABCON020000022.1_31	308	249	3.2e-06	22.6	20250	21173	GCA_013333595.2|JABCON020000022.1	31	0.21428571428571427	0.26506024096385544	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000008.1_21	470	160	5e-19	64.7	22929	24338	GCA_013333595.2|JABCON020000008.1	21	0.37872340425531914	0.96875	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013333595.2|JABCON020000013.1_45	187	160	3.4e-13	45.7	41743	42303	GCA_013333595.2|JABCON020000013.1	45	0.7165775401069518	0.725	1
RecD_0_IVD	GCA_013333595.2|JABCON020000002.1_179	684	763	0.00071	13.3	171950	174001	GCA_013333595.2|JABCON020000002.1	179	0.1608187134502924	0.1363040629095675	1
RecD_0_IVD	GCA_013333595.2|JABCON020000008.1_2	706	763	3.5e-05	17.7	2229	4346	GCA_013333595.2|JABCON020000008.1	2	0.254957507082153	0.21231979030144169	1
RecD_0_IVD	GCA_013333595.2|JABCON020000017.1_40	357	763	0.0042	10.8	38910	39980	GCA_013333595.2|JABCON020000017.1	40	0.07563025210084033	0.035386631716906945	-1
RecD_0_IVD	GCA_013333595.2|JABCON020000023.1_18	417	763	2e-15	51.5	13125	14375	GCA_013333595.2|JABCON020000023.1	18	0.6810551558752997	0.34076015727391873	1
htpX_0_CAS-III-B	GCA_013333595.2|JABCON020000016.1_7	299	343	6.9e-20	67.0	3246	4142	GCA_013333595.2|JABCON020000016.1	7	0.7157190635451505	0.6880466472303207	1