Hmm	ORF	tlen	qlen	Eval	score	start	end	Acc	Pos	Cov_seq	Cov_hmm	strand
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000003.1_7	332	284	1.3e-07	27.1	8658	9653	GCA_013333625.2|JABCOL020000003.1	7	0.2560240963855422	0.33098591549295775	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000004.1_11	240	284	0.0014	13.9	7657	8376	GCA_013333625.2|JABCOL020000004.1	11	0.31666666666666665	0.25704225352112675	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000012.1_5	241	284	1.3e-09	33.7	4026	4748	GCA_013333625.2|JABCOL020000012.1	5	0.6804979253112033	0.5669014084507042	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000013.1_12	214	284	2e-08	29.8	8638	9279	GCA_013333625.2|JABCOL020000013.1	12	0.6355140186915887	0.4612676056338028	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000013.1_2	255	284	1.9e-07	26.6	483	1247	GCA_013333625.2|JABCOL020000013.1	2	0.36470588235294116	0.31690140845070425	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000015.1_18	577	284	3.1e-07	25.9	17012	18742	GCA_013333625.2|JABCOL020000015.1	18	0.2720970537261698	0.3626760563380282	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000016.1_1	281	284	0.00072	14.8	1	843	GCA_013333625.2|JABCOL020000016.1	1	0.08185053380782918	0.08098591549295775	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000020.1_7	392	284	6.8e-05	18.2	6248	7423	GCA_013333625.2|JABCOL020000020.1	7	0.12244897959183673	0.16549295774647887	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000020.1_9	600	284	0.00046	15.5	9035	10834	GCA_013333625.2|JABCOL020000020.1	9	0.11833333333333333	0.2640845070422535	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000026.1_7	591	284	0.0024	13.1	7607	9379	GCA_013333625.2|JABCOL020000026.1	7	0.1404399323181049	0.29577464788732394	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000035.1_22	228	284	3.3e-05	19.2	15903	16586	GCA_013333625.2|JABCOL020000035.1	22	0.43859649122807015	0.3345070422535211	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000035.1_34	244	284	0.00011	17.6	30263	30994	GCA_013333625.2|JABCOL020000035.1	34	0.26229508196721313	0.22183098591549297	-1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000036.1_17	233	284	2.2e-05	19.8	16193	16891	GCA_013333625.2|JABCOL020000036.1	17	0.6223175965665236	0.5246478873239436	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000036.1_8	576	284	0.00051	15.3	8033	9760	GCA_013333625.2|JABCOL020000036.1	8	0.09722222222222222	0.20422535211267606	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000041.1_17	298	284	0.0007	14.9	15880	16773	GCA_013333625.2|JABCOL020000041.1	17	0.3221476510067114	0.3380281690140845	1
AbiEii_0_CAS-III	GCA_013333625.2|JABCOL020000041.1_32	250	284	6.9e-05	18.2	30568	31317	GCA_013333625.2|JABCOL020000041.1	32	0.464	0.3873239436619718	-1
AbiEii_1_CAS-III-A	GCA_013333625.2|JABCOL020000012.1_5	241	335	5.7e-05	18.0	4026	4748	GCA_013333625.2|JABCOL020000012.1	5	0.38589211618257263	0.28955223880597014	1
AbiEii_2_CAS-III-C	GCA_013333625.2|JABCOL020000012.1_5	241	440	0.0028	12.6	4026	4748	GCA_013333625.2|JABCOL020000012.1	5	0.34854771784232363	0.19318181818181818	1
Cas12a_M11_0_V-A	GCA_013333625.2|JABCOL020000041.1_48	883	1241	0.0074	9.6	46855	49503	GCA_013333625.2|JABCOL020000041.1	48	0.10079275198187995	0.0717163577759871	1
Cas12m_0_V-M	GCA_013333625.2|JABCOL020000035.1_9	240	577	5.8e-05	17.3	4900	5619	GCA_013333625.2|JABCOL020000035.1	9	0.2833333333333333	0.1195840554592721	-1
Cas1_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	317	7.2e-47	155.6	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.78839590443686	0.7886435331230284	-1
Cas1_0_I-II-III	GCA_013333625.2|JABCOL020000021.1_3	293	327	3.6000000000000003e-28	94.2	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.78839590443686	0.7798165137614679	-1
Cas1_0_I-II-III-V	GCA_013333625.2|JABCOL020000021.1_3	293	315	1.1e-35	118.7	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.7815699658703071	0.7841269841269841	-1
Cas1_0_IA	GCA_013333625.2|JABCOL020000021.1_3	293	347	2.9e-07	25.4	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.689419795221843	0.6512968299711815	-1
Cas1_0_IC	GCA_013333625.2|JABCOL020000021.1_3	293	340	4.4e-10	34.9	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.7508532423208191	0.7264705882352941	-1
Cas1_0_IE	GCA_013333625.2|JABCOL020000021.1_3	293	269	0.00031	15.7	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.15358361774744028	0.16728624535315986	-1
Cas1_0_II	GCA_013333625.2|JABCOL020000021.1_3	293	278	3.4e-94	310.8	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.9283276450511946	0.9964028776978417	-1
Cas1_0_V	GCA_013333625.2|JABCOL020000021.1_3	293	317	5.2e-18	60.8	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.9522184300341296	0.9495268138801262	-1
Cas1_1_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	261	2.6e-26	88.1	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.7679180887372014	0.946360153256705	-1
Cas1_3_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	262	0.00029	15.8	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.15358361774744028	0.1717557251908397	-1
Cas1_4_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	275	1.8e-94	311.6	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.9249146757679181	0.9963636363636363	-1
Cas1_5_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	338	2.9e-10	35.5	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.7474402730375427	0.727810650887574	-1
Cas1_6_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	320	1.9e-08	29.5	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.757679180887372	0.740625	-1
Cas1_7_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	328	1.6999999999999998e-49	164.3	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.8361774744027304	0.8048780487804879	-1
Cas1_8_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_3	293	283	3.6e-26	87.6	1175	2053	GCA_013333625.2|JABCOL020000021.1	3	0.7713310580204779	0.8692579505300353	-1
Cas2_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	90	7.9e-21	70.0	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.7962962962962963	0.9222222222222223	-1
Cas2_0_I-II-III	GCA_013333625.2|JABCOL020000021.1_2	108	96	2.6e-21	71.4	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.8333333333333334	0.9166666666666666	-1
Cas2_11_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	71	3e-15	51.9	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.7129629629629629	1.0	-1
Cas2_4_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	89	0.0017	14.4	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.5925925925925926	0.7191011235955056	-1
Cas2_5_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	116	1.1999999999999999e-35	118.0	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.9722222222222222	0.9224137931034483	-1
Cas2_7_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	94	8.8e-05	18.6	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.6018518518518519	0.6914893617021277	-1
Cas2_9_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000021.1_2	108	101	5.7e-33	108.9	852	1175	GCA_013333625.2|JABCOL020000021.1	2	0.9351851851851852	1.0	-1
Cas3HD_0_CAS-I	GCA_013333625.2|JABCOL020000008.1_15	497	203	0.0046	12.5	13977	15467	GCA_013333625.2|JABCOL020000008.1	15	0.16901408450704225	0.49261083743842365	1
Cas3HD_0_CAS-I	GCA_013333625.2|JABCOL020000028.1_10	97	203	0.0012	14.4	9055	9345	GCA_013333625.2|JABCOL020000028.1	10	0.41237113402061853	0.22167487684729065	-1
Cas3_0_CAS-I	GCA_013333625.2|JABCOL020000022.1_13	647	353	0.00028	15.8	8322	10262	GCA_013333625.2|JABCOL020000022.1	13	0.14683153013910355	0.28895184135977336	1
Cas3_0_CAS-I	GCA_013333625.2|JABCOL020000039.1_7	734	353	1.9e-07	26.2	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.2220708446866485	0.44192634560906513	-1
Cas3_0_I	GCA_013333625.2|JABCOL020000022.1_13	647	358	0.0002	16.2	8322	10262	GCA_013333625.2|JABCOL020000022.1	13	0.15301391035548687	0.2988826815642458	1
Cas3_0_I	GCA_013333625.2|JABCOL020000039.1_7	734	358	1.5e-07	26.5	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.23160762942779292	0.44972067039106145	-1
Cas3_0_ID	GCA_013333625.2|JABCOL020000039.1_7	734	357	0.00028	15.7	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.1553133514986376	0.3165266106442577	-1
Cas3_1_CAS-I	GCA_013333625.2|JABCOL020000022.1_13	647	745	0.0062	10.5	8322	10262	GCA_013333625.2|JABCOL020000022.1	13	0.1777434312210201	0.16778523489932887	1
Cas3_1_CAS-I	GCA_013333625.2|JABCOL020000039.1_7	734	745	4e-08	27.6	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.14577656675749318	0.13288590604026845	-1
Cas3_1_CAS-I-D	GCA_013333625.2|JABCOL020000039.1_7	734	353	0.00021	16.1	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.14577656675749318	0.3002832861189802	-1
Cas3_1_I	GCA_013333625.2|JABCOL020000008.1_15	497	178	0.0024	13.6	13977	15467	GCA_013333625.2|JABCOL020000008.1	15	0.158953722334004	0.46629213483146065	1
Cas3_1_I	GCA_013333625.2|JABCOL020000028.1_10	97	178	0.0033	13.1	9055	9345	GCA_013333625.2|JABCOL020000028.1	10	0.3711340206185567	0.2247191011235955	-1
Cas3_2_CAS-I	GCA_013333625.2|JABCOL020000039.1_7	734	967	2e-05	18.5	5223	7424	GCA_013333625.2|JABCOL020000039.1	7	0.09128065395095368	0.06514994829369183	-1
Cas9_0_II	GCA_013333625.2|JABCOL020000021.1_4	1337	830	1.3e-206	684.3	2055	6065	GCA_013333625.2|JABCOL020000021.1	4	0.74943904263276	0.9867469879518073	-1
Cas9_0_II-C2	GCA_013333625.2|JABCOL020000021.1_4	1337	967	7.2e-10	33.3	2055	6065	GCA_013333625.2|JABCOL020000021.1	4	0.14884068810770382	0.17063081695966908	-1
Cas9_0_II-D	GCA_013333625.2|JABCOL020000021.1_4	1337	853	2.2e-15	51.8	2055	6065	GCA_013333625.2|JABCOL020000021.1	4	0.18175018698578907	0.30363423212192264	-1
Cas9_1_CAS-II-C	GCA_013333625.2|JABCOL020000021.1_4	1337	568	1e-53	178.6	2055	6065	GCA_013333625.2|JABCOL020000021.1	4	0.9169783096484667	0.875	-1
Cas9_1_II	GCA_013333625.2|JABCOL020000021.1_4	1337	1120	6.099999999999999e-147	487.2	2055	6065	GCA_013333625.2|JABCOL020000021.1	4	0.8788332086761406	0.8839285714285714	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000008.1_5	237	198	0.00041	15.7	3501	4211	GCA_013333625.2|JABCOL020000008.1	5	0.12658227848101267	0.15656565656565657	1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000022.1_11	104	198	5.2e-05	18.6	7223	7534	GCA_013333625.2|JABCOL020000022.1	11	0.4519230769230769	0.23232323232323232	-1
CasR_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000036.1_21	86	198	3.7e-07	25.6	21349	21606	GCA_013333625.2|JABCOL020000036.1	21	0.6162790697674418	0.2676767676767677	1
CasR_0_CAS-III-B-III-D	GCA_013333625.2|JABCOL020000013.1_7	201	255	0.029	9.5	4852	5454	GCA_013333625.2|JABCOL020000013.1	7	0.4427860696517413	0.24705882352941178	-1
CasR_0_CAS-III-B-III-D	GCA_013333625.2|JABCOL020000018.1_3	391	255	0.0031	12.7	1945	3117	GCA_013333625.2|JABCOL020000018.1	3	0.3554987212276215	0.396078431372549	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000008.1_5	237	218	0.00054	14.9	3501	4211	GCA_013333625.2|JABCOL020000008.1	5	0.11814345991561181	0.12844036697247707	1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000022.1_11	104	218	0.00015	16.6	7223	7534	GCA_013333625.2|JABCOL020000022.1	11	0.4423076923076923	0.20642201834862386	-1
CasR_1_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000036.1_21	86	218	4.8e-08	28.1	21349	21606	GCA_013333625.2|JABCOL020000036.1	21	0.6162790697674418	0.24311926605504589	1
Cmr5gr11_1_CAS-III-B	GCA_013333625.2|JABCOL020000035.1_35	279	137	0.0074	11.8	31008	31844	GCA_013333625.2|JABCOL020000035.1	35	0.1863799283154122	0.23357664233576642	-1
CorA_0_CAS-III-B-III-D	GCA_013333625.2|JABCOL020000041.1_42	289	551	1.4e-06	23.0	41321	42187	GCA_013333625.2|JABCOL020000041.1	42	0.21453287197231835	0.11978221415607986	1
CorA_1_CAS-III-B	GCA_013333625.2|JABCOL020000024.1_1	169	125	0.019	10.6	467	973	GCA_013333625.2|JABCOL020000024.1	1	0.7692307692307693	0.456	1
CorA_1_CAS-III-B	GCA_013333625.2|JABCOL020000032.1_9	179	125	0.0024	13.5	4685	5221	GCA_013333625.2|JABCOL020000032.1	9	0.6089385474860335	0.544	-1
CorA_1_CAS-III-B	GCA_013333625.2|JABCOL020000039.1_4	431	125	0.64	5.7	2095	3387	GCA_013333625.2|JABCOL020000039.1	4	0.19953596287703015	0.68	-1
Csa3_1_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000022.1_11	104	118	0.00051	16.1	7223	7534	GCA_013333625.2|JABCOL020000022.1	11	0.40384615384615385	0.3813559322033898	-1
Csf4_1_IVA1	GCA_013333625.2|JABCOL020000022.1_13	647	802	1.8e-05	18.7	8322	10262	GCA_013333625.2|JABCOL020000022.1	13	0.1035548686244204	0.08104738154613467	1
Csm4gr5_1_CAS-III-A	GCA_013333625.2|JABCOL020000044.1_19	82	315	0.0078	11.1	8272	8517	GCA_013333625.2|JABCOL020000044.1	19	0.6707317073170732	0.1746031746031746	1
Csn2_0_CAS-II-A	GCA_013333625.2|JABCOL020000021.1_1	230	223	5.5e-32	106.7	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.9652173913043478	0.9865470852017937	-1
Csn2_0_IIA	GCA_013333625.2|JABCOL020000021.1_1	230	222	5.6e-31	103.6	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.9695652173913043	0.9954954954954955	-1
Csn2_13_CAS-II-A	GCA_013333625.2|JABCOL020000021.1_1	230	180	4.3e-21	71.1	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.7695652173913043	0.9888888888888889	-1
Csn2_1_CAS-II-A	GCA_013333625.2|JABCOL020000021.1_1	230	218	8e-17	57.3	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.8826086956521739	0.8990825688073395	-1
Csn2_3_CAS-II-A	GCA_013333625.2|JABCOL020000021.1_1	230	219	1.5e-19	66.3	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.9130434782608695	0.9452054794520548	-1
Csn2_5_CAS-II-A	GCA_013333625.2|JABCOL020000021.1_1	230	223	9.6e-05	17.8	166	855	GCA_013333625.2|JABCOL020000021.1	1	0.7695652173913043	0.8071748878923767	-1
Csn2_7_CAS-II-A	GCA_013333625.2|JABCOL020000003.1_7	332	372	0.0023	12.6	8658	9653	GCA_013333625.2|JABCOL020000003.1	7	0.35843373493975905	0.32526881720430106	-1
Csn2_7_CAS-II-A	GCA_013333625.2|JABCOL020000035.1_22	228	372	0.00096	13.9	15903	16586	GCA_013333625.2|JABCOL020000035.1	22	0.3333333333333333	0.20430107526881722	-1
Csx1_18_CAS-III	GCA_013333625.2|JABCOL020000035.1_44	185	376	0.0008	14.7	39640	40194	GCA_013333625.2|JABCOL020000035.1	44	0.5675675675675675	0.2473404255319149	-1
Csx1_7_CAS-III	GCA_013333625.2|JABCOL020000030.1_4	225	309	0.057	8.6	4246	4920	GCA_013333625.2|JABCOL020000030.1	4	0.3466666666666667	0.29449838187702265	-1
Csx3_2_CAS-I-III	GCA_013333625.2|JABCOL020000010.1_5	468	277	1.8e-05	19.7	3112	4515	GCA_013333625.2|JABCOL020000010.1	5	0.13034188034188035	0.13357400722021662	-1
Csx3_2_CAS-I-III	GCA_013333625.2|JABCOL020000013.1_12	214	277	0.0052	11.6	8638	9279	GCA_013333625.2|JABCOL020000013.1	12	0.22429906542056074	0.21299638989169675	1
Csx3_2_CAS-I-III	GCA_013333625.2|JABCOL020000014.1_1	435	277	0.0049	11.7	52	1356	GCA_013333625.2|JABCOL020000014.1	1	0.14482758620689656	0.20938628158844766	-1
CysH_0_IVB	GCA_013333625.2|JABCOL020000006.1_4	289	249	1.7e-05	20.3	4299	5165	GCA_013333625.2|JABCOL020000006.1	4	0.21107266435986158	0.24096385542168675	-1
CysH_0_IVB	GCA_013333625.2|JABCOL020000014.1_8	349	249	2.4e-05	19.8	9385	10431	GCA_013333625.2|JABCOL020000014.1	8	0.1174785100286533	0.1646586345381526	-1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000026.1_2	472	160	3.6e-19	65.2	1232	2647	GCA_013333625.2|JABCOL020000026.1	2	0.3834745762711864	0.98125	1
DEDDh_0_CAS-I-II-III-IV-V-VI	GCA_013333625.2|JABCOL020000041.1_41	184	160	1.5e-11	40.4	40773	41324	GCA_013333625.2|JABCOL020000041.1	41	0.7608695652173914	0.76875	1
RecD_0_IVD	GCA_013333625.2|JABCOL020000005.1_17	1117	763	0.0028	11.4	11318	14668	GCA_013333625.2|JABCOL020000005.1	17	0.13070725156669652	0.16251638269986893	-1
RecD_0_IVD	GCA_013333625.2|JABCOL020000012.1_5	241	763	0.0032	11.2	4026	4748	GCA_013333625.2|JABCOL020000012.1	5	0.34024896265560167	0.10615989515072084	1
RecD_0_IVD	GCA_013333625.2|JABCOL020000014.1_22	707	763	1.3e-06	22.5	22933	25053	GCA_013333625.2|JABCOL020000014.1	22	0.3125884016973126	0.26474442988204455	-1
RecD_0_IVD	GCA_013333625.2|JABCOL020000023.1_11	512	763	5.5e-15	50.2	9763	11298	GCA_013333625.2|JABCOL020000023.1	11	0.541015625	0.3302752293577982	-1
htpX_0_CAS-III-B	GCA_013333625.2|JABCOL020000034.1_2	281	343	2.7e-14	48.7	873	1715	GCA_013333625.2|JABCOL020000034.1	2	0.6227758007117438	0.5189504373177842	-1
htpX_0_CAS-III-B	GCA_013333625.2|JABCOL020000035.1_24	364	343	4e-06	21.9	17720	18811	GCA_013333625.2|JABCOL020000035.1	24	0.717032967032967	0.7755102040816326	-1