##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Escherichia coli SE15
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 4717338
contig_1	Bakta	region	1	4717338	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
contig_1	Pyrodigal	gene	3	119	.	+	.	ID=GCA000010485_00001_gene;locus_tag=GCA000010485_00001
contig_1	Pyrodigal	CDS	3	119	.	+	0	ID=GCA000010485_00001;Name=hypothetical protein;locus_tag=GCA000010485_00001;product=hypothetical protein;pseudo=True;Parent=GCA000010485_00001_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Bakta	gene	190	255	.	+	.	ID=GCA000010485_00002_gene;locus_tag=GCA000010485_00002;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	190	255	.	+	0	ID=GCA000010485_00002;Name=thr operon leader peptide;locus_tag=GCA000010485_00002;product=thr operon leader peptide;Parent=GCA000010485_00002_gene;Note=RefSeq:WP_001386572.1,SO:0001217,UniParc:UPI000012E897,UniRef:UniRef100_P0AD86,UniRef:UniRef90_P0AD86
contig_1	Infernal	regulatory_region	191	310	1.2e-21	+	.	ID=EFPPCJGBKI_287;Name=Threonine operon leader;product=Threonine operon leader;Dbxref=RFAM:RF00506;inference=profile:Rfam:RF00506;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	337	2799	.	+	.	ID=GCA000010485_00003_gene;locus_tag=GCA000010485_00003;gene=thrA
contig_1	Pyrodigal	CDS	337	2799	.	+	0	ID=GCA000010485_00003;Name=bifunctional aspartate kinase/homoserine dehydrogenase I;locus_tag=GCA000010485_00003;product=bifunctional aspartate kinase/homoserine dehydrogenase I;Dbxref=GO:0004072,GO:0004412,GO:0005524,GO:0008652,GO:0009067,GO:0009086,GO:0009088,GO:0009089,GO:0009090,GO:0042802,GO:0046872,GO:0050661,GO:0051289,GO:0070403;gene=thrA;Parent=GCA000010485_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,KEGG:K12524,RefSeq:WP_001264698.1,SO:0001217,UniParc:UPI00000D072F,UniRef:UniRef100_C3TRR2,UniRef:UniRef50_P00561,UniRef:UniRef90_P00561;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	2801	3733	.	+	.	ID=GCA000010485_00004_gene;locus_tag=GCA000010485_00004;gene=thrB
contig_1	Pyrodigal	CDS	2801	3733	.	+	0	ID=GCA000010485_00004;Name=homoserine kinase;locus_tag=GCA000010485_00004;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000010485_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,KEGG:K00872,RefSeq:WP_000241660.1,SO:0001217,UniParc:UPI00005E2EC0,UniRef:UniRef100_A7ZH92,UniRef:UniRef50_P00547,UniRef:UniRef90_P00547;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	3734	5020	.	+	.	ID=GCA000010485_00005_gene;locus_tag=GCA000010485_00005;gene=thrC
contig_1	Pyrodigal	CDS	3734	5020	.	+	0	ID=GCA000010485_00005;Name=threonine synthase;locus_tag=GCA000010485_00005;product=threonine synthase;Dbxref=GO:0004795,GO:0005829,GO:0009088,GO:0030170;gene=thrC;Parent=GCA000010485_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0498,COG:E,KEGG:K01733,RefSeq:WP_000781082.1,SO:0001217,UniParc:UPI0001C2288E,UniRef:UniRef100_A0A7I0L3I7,UniRef:UniRef50_P00934,UniRef:UniRef90_P00934;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	5235	5531	.	+	.	ID=GCA000010485_00006_gene;locus_tag=GCA000010485_00006
contig_1	Pyrodigal	CDS	5235	5531	.	+	0	ID=GCA000010485_00006;Name=DUF2502 domain-containing protein;locus_tag=GCA000010485_00006;product=DUF2502 domain-containing protein;Parent=GCA000010485_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000738734.1,SO:0001217,UniParc:UPI00000E4984,UniRef:UniRef100_A0A0D8VN30,UniRef:UniRef50_P75616,UniRef:UniRef90_A0A0A0ZZF3
contig_1	Pyrodigal	gene	5571	6347	.	-	.	ID=GCA000010485_00007_gene;locus_tag=GCA000010485_00007;gene=yaaA
contig_1	Pyrodigal	CDS	5571	6347	.	-	0	ID=GCA000010485_00007;Name=peroxide stress protein YaaA;locus_tag=GCA000010485_00007;product=peroxide stress protein YaaA;Dbxref=GO:0005829,GO:0033194;gene=yaaA;Parent=GCA000010485_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3022,COG:L,KEGG:K09861,RefSeq:WP_000906178.1,SO:0001217,UniParc:UPI0001C2288F,UniRef:UniRef100_A0A0J2B8C7,UniRef:UniRef50_P0A8I3,UniRef:UniRef90_P0A8I3
contig_1	Pyrodigal	gene	6417	7847	.	-	.	ID=GCA000010485_00008_gene;locus_tag=GCA000010485_00008;gene=yaaJ
contig_1	Pyrodigal	CDS	6417	7847	.	-	0	ID=GCA000010485_00008;Name=putative transporter YaaJ;locus_tag=GCA000010485_00008;product=putative transporter YaaJ;Dbxref=GO:0005283,GO:0005886;gene=yaaJ;Parent=GCA000010485_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03310,RefSeq:WP_001112573.1,SO:0001217,UniParc:UPI0001C22890,UniRef:UniRef100_A0A7I0KU75,UniRef:UniRef50_P30143,UniRef:UniRef90_P30143
contig_1	Pyrodigal	gene	8126	9079	.	+	.	ID=GCA000010485_00009_gene;locus_tag=GCA000010485_00009;gene=tal
contig_1	Pyrodigal	CDS	8126	9079	.	+	0	ID=GCA000010485_00009;Name=transaldolase B;locus_tag=GCA000010485_00009;product=transaldolase B;Dbxref=GO:0004801,GO:0005737,GO:0005829,GO:0005975,GO:0006098;gene=tal;Parent=GCA000010485_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000130175,COG:COG0176,COG:G,KEGG:K00616,RefSeq:WP_000130187.1,SO:0001217,UniParc:UPI00005E2EC4,UniRef:UniRef100_Q8FLD1,UniRef:UniRef50_P0A870,UniRef:UniRef90_P0A870;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	9194	9781	.	+	.	ID=GCA000010485_00010_gene;locus_tag=GCA000010485_00010;gene=mog
contig_1	Pyrodigal	CDS	9194	9781	.	+	0	ID=GCA000010485_00010;Name=molybdopterin adenylyltransferase;locus_tag=GCA000010485_00010;product=molybdopterin adenylyltransferase;Dbxref=GO:0006777;gene=mog;Parent=GCA000010485_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_001094685.1,SO:0001217,UniParc:UPI00005EFA7B,UniRef:UniRef100_E2QE98,UniRef:UniRef50_P0AF03,UniRef:UniRef90_A0A5H9IUB0;ec_number=2.7.7.75
contig_1	Pyrodigal	gene	9816	10382	.	-	.	ID=GCA000010485_00011_gene;locus_tag=GCA000010485_00011;gene=satP
contig_1	Pyrodigal	CDS	9816	10382	.	-	0	ID=GCA000010485_00011;Name=acetate uptake transporter;locus_tag=GCA000010485_00011;product=acetate uptake transporter;Dbxref=GO:0005886,GO:0015360,GO:0016020,GO:0071422;gene=satP;Parent=GCA000010485_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1584,RefSeq:WP_000528533.1,SO:0001217,UniParc:UPI00000DE6CD,UniRef:UniRef100_E2QE99,UniRef:UniRef50_P0AC98,UniRef:UniRef90_P0AC98
contig_1	Pyrodigal	gene	10531	11244	.	-	.	ID=GCA000010485_00012_gene;locus_tag=GCA000010485_00012;gene=msyB
contig_1	Pyrodigal	CDS	10531	11244	.	-	0	ID=GCA000010485_00012;Name=acidic protein MsyB;locus_tag=GCA000010485_00012;product=acidic protein MsyB;gene=msyB;Parent=GCA000010485_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4735,COG:S,RefSeq:WP_001102393.1,SO:0001217,UniParc:UPI00005EFA7A,UniRef:UniRef100_E2QEA0,UniRef:UniRef50_P58316,UniRef:UniRef90_P58316
contig_1	Pyrodigal	gene	11270	11674	.	-	.	ID=GCA000010485_00013_gene;locus_tag=GCA000010485_00013;gene=yaaI
contig_1	Pyrodigal	CDS	11270	11674	.	-	0	ID=GCA000010485_00013;Name=DUF2541 domain-containing protein;locus_tag=GCA000010485_00013;product=DUF2541 domain-containing protein;gene=yaaI;Parent=GCA000010485_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000843689.1,SO:0001217,UniParc:UPI00005EFA79,UniRef:UniRef100_Q0TLX6,UniRef:UniRef50_Q32KA6,UniRef:UniRef90_Q32KA6
contig_1	Pyrodigal	gene	12045	13961	.	+	.	ID=GCA000010485_00014_gene;locus_tag=GCA000010485_00014;gene=dnaK
contig_1	Pyrodigal	CDS	12045	13961	.	+	0	ID=GCA000010485_00014;Name=molecular chaperone DnaK;locus_tag=GCA000010485_00014;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0005829,GO:0006260,GO:0006457,GO:0016887,GO:0031072,GO:0042026,GO:0044183,GO:0051082,GO:0051085,GO:0140662;gene=dnaK;Parent=GCA000010485_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_000516135.1,SO:0001217,UniParc:UPI000004C26F,UniRef:UniRef100_P0A6Y8,UniRef:UniRef50_P0A6Y8,UniRef:UniRef90_P0A6Y8
contig_1	Infernal	gene	13972	14049	.	+	.	ID=GCA000010485_00015_gene;locus_tag=GCA000010485_00015;gene=tpke11
contig_1	Infernal	ncRNA	13972	14049	6.1e-13	+	.	ID=GCA000010485_00015;Name=tpke11;locus_tag=GCA000010485_00015;product=tpke11;Dbxref=RFAM:RF02031;Parent=GCA000010485_00015_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02031
contig_1	Pyrodigal	gene	14050	15180	.	+	.	ID=GCA000010485_00016_gene;locus_tag=GCA000010485_00016;gene=dnaJ
contig_1	Pyrodigal	CDS	14050	15180	.	+	0	ID=GCA000010485_00016;Name=molecular chaperone DnaJ;locus_tag=GCA000010485_00016;product=molecular chaperone DnaJ;Dbxref=GO:0005515,GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000010485_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_001118464.1,SO:0001217,UniParc:UPI00000D073E,UniRef:UniRef100_A7ZHA5,UniRef:UniRef50_P08622,UniRef:UniRef90_P08622;ec_number=1.8.4.-
contig_1	Infernal	gene	15434	15586	.	-	.	ID=GCA000010485_00017_gene;locus_tag=GCA000010485_00017;gene=sok
contig_1	Infernal	ncRNA	15434	15586	3.3e-19	-	.	ID=GCA000010485_00017;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_00017;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_00017_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	16050	16811	.	+	.	ID=GCA000010485_00018_gene;locus_tag=GCA000010485_00018
contig_1	Pyrodigal	CDS	16050	16811	.	+	0	ID=GCA000010485_00018;Name=Nucleoside-specific channel-forming protein Tsx;locus_tag=GCA000010485_00018;product=Nucleoside-specific channel-forming protein Tsx;Parent=GCA000010485_00018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001274833.1,SO:0001217,UniParc:UPI0001C22893,UniRef:UniRef100_A0A061KXX5,UniRef:UniRef50_A9MR55,UniRef:UniRef90_A0A8S0G3N7
contig_1	Pyrodigal	gene	16832	18325	.	+	.	ID=GCA000010485_00019_gene;locus_tag=GCA000010485_00019
contig_1	Pyrodigal	CDS	16832	18325	.	+	0	ID=GCA000010485_00019;Name=Arylsulfatase;locus_tag=GCA000010485_00019;product=Arylsulfatase;Parent=GCA000010485_00019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001173016.1,SO:0001217,UniParc:UPI0001C22894,UniRef:UniRef100_A0A066SX72,UniRef:UniRef50_A0A237NMI4,UniRef:UniRef90_A0A237NMI4
contig_1	Pyrodigal	gene	18454	19713	.	+	.	ID=GCA000010485_00020_gene;locus_tag=GCA000010485_00020
contig_1	Pyrodigal	CDS	18454	19713	.	+	0	ID=GCA000010485_00020;Name=Cytoplasmic protein;locus_tag=GCA000010485_00020;product=Cytoplasmic protein;Parent=GCA000010485_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000494928.1,SO:0001217,UniParc:UPI00000DE6D1,UniRef:UniRef100_E2QEA7,UniRef:UniRef50_A9MR52,UniRef:UniRef90_A0A376VWU4
contig_1	Pyrodigal	gene	19948	21114	.	+	.	ID=GCA000010485_00021_gene;locus_tag=GCA000010485_00021;gene=nhaA
contig_1	Pyrodigal	CDS	19948	21114	.	+	0	ID=GCA000010485_00021;Name=Na+/H+ antiporter NhaA;locus_tag=GCA000010485_00021;product=Na+/H+ antiporter NhaA;Dbxref=GO:0005886,GO:0006814,GO:0006885,GO:0015385,GO:0016020;gene=nhaA;Parent=GCA000010485_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3004,COG:CP,KEGG:K03313,RefSeq:WP_000681384.1,SO:0001217,UniParc:UPI0000DACCD4,UniRef:UniRef100_Q0TLW9,UniRef:UniRef50_P13738,UniRef:UniRef90_P13738
contig_1	Pyrodigal	gene	21180	22079	.	+	.	ID=GCA000010485_00022_gene;locus_tag=GCA000010485_00022;gene=nhaR
contig_1	Pyrodigal	CDS	21180	22079	.	+	0	ID=GCA000010485_00022;Name=transcriptional activator NhaR;locus_tag=GCA000010485_00022;product=transcriptional activator NhaR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:2000142;gene=nhaR;Parent=GCA000010485_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001295755.1,SO:0001217,UniParc:UPI00016A082E,UniRef:UniRef100_A0A1U9TYY0,UniRef:UniRef50_P0A9G2,UniRef:UniRef90_P0A9G2
contig_1	Pyrodigal	gene	22137	24176	.	-	.	ID=GCA000010485_00023_gene;locus_tag=GCA000010485_00023
contig_1	Pyrodigal	CDS	22137	24176	.	-	0	ID=GCA000010485_00023;Name=Family 31 glucosidase;locus_tag=GCA000010485_00023;product=Family 31 glucosidase;Parent=GCA000010485_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000008156.1,SO:0001217,UniParc:UPI0001C22895,UniRef:UniRef100_A0A066SXX5,UniRef:UniRef50_Q01336,UniRef:UniRef90_A0A6D0FWY9
contig_1	Pyrodigal	gene	24204	25577	.	-	.	ID=GCA000010485_00024_gene;locus_tag=GCA000010485_00024
contig_1	Pyrodigal	CDS	24204	25577	.	-	0	ID=GCA000010485_00024;Name=2%2C3-dihydroxypropane-1-sulfonate exporter;locus_tag=GCA000010485_00024;product=2%2C3-dihydroxypropane-1-sulfonate exporter;Parent=GCA000010485_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000100026.1,SO:0001217,UniParc:UPI0001C22896,UniRef:UniRef100_A0A066SX67,UniRef:UniRef50_A0A229AM61,UniRef:UniRef90_A0A229AM61
contig_1	Pyrodigal	gene	25966	26229	.	-	.	ID=GCA000010485_00025_gene;locus_tag=GCA000010485_00025;gene=rpsT
contig_1	Pyrodigal	CDS	25966	26229	.	-	0	ID=GCA000010485_00025;Name=30S ribosomal protein S20;locus_tag=GCA000010485_00025;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000010485_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_001274021.1,SO:0001217,UniParc:UPI000003EB59,UniRef:UniRef100_P0A7U7,UniRef:UniRef50_P0A7U7,UniRef:UniRef90_P0A7U7
contig_1	Pyrodigal	gene	26558	27499	.	+	.	ID=GCA000010485_00026_gene;locus_tag=GCA000010485_00026;gene=ribF
contig_1	Pyrodigal	CDS	26558	27499	.	+	0	ID=GCA000010485_00026;Name=bifunctional riboflavin kinase/FAD synthetase;locus_tag=GCA000010485_00026;product=bifunctional riboflavin kinase/FAD synthetase;Dbxref=GO:0003919,GO:0005524,GO:0006747,GO:0006771,GO:0008531,GO:0009231,GO:0009398;gene=ribF;Parent=GCA000010485_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_000767329.1,SO:0001217,UniParc:UPI00001338DE,UniRef:UniRef100_P0AG40,UniRef:UniRef50_P0AG40,UniRef:UniRef90_P0AG40;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	27542	30358	.	+	.	ID=GCA000010485_00027_gene;locus_tag=GCA000010485_00027;gene=ileS
contig_1	Pyrodigal	CDS	27542	30358	.	+	0	ID=GCA000010485_00027;Name=isoleucine--tRNA ligase;locus_tag=GCA000010485_00027;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000010485_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_001286823.1,SO:0001217,UniParc:UPI00000DE6D6,UniRef:UniRef100_Q8FLB7,UniRef:UniRef50_P00956,UniRef:UniRef90_P00956;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	30358	30852	.	+	.	ID=GCA000010485_00028_gene;locus_tag=GCA000010485_00028;gene=lspA
contig_1	Pyrodigal	CDS	30358	30852	.	+	0	ID=GCA000010485_00028;Name=signal peptidase II;locus_tag=GCA000010485_00028;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA000010485_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_000083380.1,SO:0001217,UniParc:UPI0001C22898,UniRef:UniRef100_A0A061YQG0,UniRef:UniRef50_P00804,UniRef:UniRef90_P00804;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	30960	31409	.	+	.	ID=GCA000010485_00029_gene;locus_tag=GCA000010485_00029;gene=fkpB
contig_1	Pyrodigal	CDS	30960	31409	.	+	0	ID=GCA000010485_00029;Name=FKBP-type peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000010485_00029;product=FKBP-type peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0003755,GO:0006457,GO:0140839,GO:0140840;gene=fkpB;Parent=GCA000010485_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000004655.1,SO:0001217,UniParc:UPI000016395C,UniRef:UniRef100_P0AEM0,UniRef:UniRef50_P0AEM0,UniRef:UniRef90_P0AEM0;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	31411	32361	.	+	.	ID=GCA000010485_00030_gene;locus_tag=GCA000010485_00030;gene=ispH
contig_1	Pyrodigal	CDS	31411	32361	.	+	0	ID=GCA000010485_00030;Name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;locus_tag=GCA000010485_00030;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;Dbxref=GO:0016114,GO:0019288,GO:0046872,GO:0050992,GO:0051539,GO:0051745;gene=ispH;Parent=GCA000010485_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0761,COG:I,KEGG:K03527,RefSeq:WP_001166395.1,SO:0001217,UniParc:UPI00000541D2,UniRef:UniRef100_P62623,UniRef:UniRef50_P62623,UniRef:UniRef90_P62623;ec_number=1.17.7.4
contig_1	Pyrodigal	gene	32427	33341	.	+	.	ID=GCA000010485_00031_gene;locus_tag=GCA000010485_00031;gene=rihC
contig_1	Pyrodigal	CDS	32427	33341	.	+	0	ID=GCA000010485_00031;Name=ribonucleoside hydrolase RihC;locus_tag=GCA000010485_00031;product=ribonucleoside hydrolase RihC;Dbxref=GO:0005829,GO:0006144,GO:0006152,GO:0006206,GO:0008477,GO:0016799,GO:0045437;gene=rihC;Parent=GCA000010485_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,KEGG:K12700,RefSeq:WP_000550598.1,SO:0001217,UniParc:UPI0001C22899,UniRef:UniRef100_A0A066SP86,UniRef:UniRef50_P22564,UniRef:UniRef90_P22564;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	33364	33729	.	+	.	ID=GCA000010485_00032_gene;locus_tag=GCA000010485_00032
contig_1	Pyrodigal	CDS	33364	33729	.	+	0	ID=GCA000010485_00032;Name=DUF805 domain-containing protein;locus_tag=GCA000010485_00032;product=DUF805 domain-containing protein;Parent=GCA000010485_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220881.1,SO:0001217,UniParc:UPI0001C2289A,UniRef:UniRef100_A0A061YHB2,UniRef:UniRef50_A0A0D8VMJ6,UniRef:UniRef90_A0A0D8VMJ6
contig_1	Pyrodigal	gene	33890	34711	.	+	.	ID=GCA000010485_00033_gene;locus_tag=GCA000010485_00033;gene=dapB
contig_1	Pyrodigal	CDS	33890	34711	.	+	0	ID=GCA000010485_00033;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000010485_00033;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0008839,GO:0009089,GO:0016726,GO:0019877,GO:0050661,GO:0051287;gene=dapB;Parent=GCA000010485_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_000543585.1,SO:0001217,UniParc:UPI000000DDD0,UniRef:UniRef100_B7MAF2,UniRef:UniRef50_P04036,UniRef:UniRef90_P04036;ec_number=1.17.1.8
contig_1	Infernal	gene	35067	35119	.	+	.	ID=GCA000010485_00034_gene;locus_tag=GCA000010485_00034;gene=ES003
contig_1	Infernal	ncRNA	35067	35119	2.8e-15	+	.	ID=GCA000010485_00034;Name=ES003 sRNA;locus_tag=GCA000010485_00034;product=ES003 sRNA;Dbxref=RFAM:RF02750;Parent=GCA000010485_00034_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02750
contig_1	Pyrodigal	gene	35167	36315	.	+	.	ID=GCA000010485_00035_gene;locus_tag=GCA000010485_00035;gene=carA
contig_1	Pyrodigal	CDS	35167	36315	.	+	0	ID=GCA000010485_00035;Name=carbamoyl phosphate synthase small subunit;locus_tag=GCA000010485_00035;product=carbamoyl phosphate synthase small subunit;Dbxref=GO:0004088,GO:0004359,GO:0005524,GO:0005737,GO:0005951,GO:0006207,GO:0006526,GO:0006541,GO:0044205;gene=carA;Parent=GCA000010485_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0505,COG:EF,RefSeq:WP_001295757.1,SO:0001217,UniParc:UPI00001A95F5,UniRef:UniRef100_Q8FLB1,UniRef:UniRef50_P0A6F1,UniRef:UniRef90_P0A6F1;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	36333	39554	.	+	.	ID=GCA000010485_00036_gene;locus_tag=GCA000010485_00036;gene=carB
contig_1	Pyrodigal	CDS	36333	39554	.	+	0	ID=GCA000010485_00036;Name=carbamoyl-phosphate synthase large subunit;locus_tag=GCA000010485_00036;product=carbamoyl-phosphate synthase large subunit;Dbxref=GO:0000166,GO:0004087,GO:0004088,GO:0005524,GO:0005737,GO:0005829,GO:0005951,GO:0006526,GO:0006541,GO:0008152,GO:0008652,GO:0016597,GO:0019856,GO:0044205,GO:0046872;gene=carB;Parent=GCA000010485_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0458,COG:EF,RefSeq:WP_001126341.1,SO:0001217,UniParc:UPI0001C2289C,UniRef:UniRef100_A0A3K2EJW5,UniRef:UniRef50_P00968,UniRef:UniRef90_P00968;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	39815	40210	.	+	.	ID=GCA000010485_00037_gene;locus_tag=GCA000010485_00037;gene=caiF
contig_1	Pyrodigal	CDS	39815	40210	.	+	0	ID=GCA000010485_00037;Name=carnitine metabolism transcriptional regulator CaiF;locus_tag=GCA000010485_00037;product=carnitine metabolism transcriptional regulator CaiF;Dbxref=GO:0006351;gene=caiF;Parent=GCA000010485_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08277,RefSeq:WP_000333124.1,SO:0001217,UniParc:UPI0001C2289E,UniRef:UniRef100_A0A066SX50,UniRef:UniRef50_P0AE58,UniRef:UniRef90_P0AE58
contig_1	Pyrodigal	gene	40329	40919	.	-	.	ID=GCA000010485_00038_gene;locus_tag=GCA000010485_00038;gene=caiE
contig_1	Pyrodigal	CDS	40329	40919	.	-	0	ID=GCA000010485_00038;Name=carnitine operon protein CaiE;locus_tag=GCA000010485_00038;product=carnitine operon protein CaiE;Dbxref=GO:0009437,GO:0016740;gene=caiE;Parent=GCA000010485_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0663,COG:R,KEGG:K08279,RefSeq:WP_000122882.1,SO:0001217,UniParc:UPI000187B7F3,UniRef:UniRef100_B7UI81,UniRef:UniRef50_P39206,UniRef:UniRef90_P39206
contig_1	Pyrodigal	gene	40925	41710	.	-	.	ID=GCA000010485_00039_gene;locus_tag=GCA000010485_00039;gene=caiD
contig_1	Pyrodigal	CDS	40925	41710	.	-	0	ID=GCA000010485_00039;Name=crotonobetainyl-CoA hydratase;locus_tag=GCA000010485_00039;product=crotonobetainyl-CoA hydratase;Dbxref=GO:0006635,GO:0008735,GO:0008809,GO:0016836,GO:0042413,GO:0120092;gene=caiD;Parent=GCA000010485_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1024,COG:I,KEGG:K08299,RefSeq:WP_000004399.1,SO:0001217,UniParc:UPI00005EFCA4,UniRef:UniRef100_Q8FLA6,UniRef:UniRef50_P31551,UniRef:UniRef90_P31551;ec_number=4.2.1.149
contig_1	Pyrodigal	gene	41819	43372	.	-	.	ID=GCA000010485_00040_gene;locus_tag=GCA000010485_00040;gene=caiC
contig_1	Pyrodigal	CDS	41819	43372	.	-	0	ID=GCA000010485_00040;Name=crotonobetaine/carnitine-CoA ligase;locus_tag=GCA000010485_00040;product=crotonobetaine/carnitine-CoA ligase;Dbxref=GO:0006631,GO:0009437,GO:0016405,GO:0031956,GO:0051108,GO:0051109;gene=caiC;Parent=GCA000010485_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001545811.1,SO:0001217,UniParc:UPI0002A3592D,UniRef:UniRef100_A0A641DY66,UniRef:UniRef50_P31552,UniRef:UniRef90_P31552;ec_number=6.2.1.48
contig_1	Pyrodigal	gene	43445	44662	.	-	.	ID=GCA000010485_00041_gene;locus_tag=GCA000010485_00041;gene=caiB
contig_1	Pyrodigal	CDS	43445	44662	.	-	0	ID=GCA000010485_00041;Name=L-carnitine CoA-transferase;locus_tag=GCA000010485_00041;product=L-carnitine CoA-transferase;Dbxref=GO:0005737,GO:0008735,GO:0009437,GO:0016782;gene=caiB;Parent=GCA000010485_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1804,COG:I,KEGG:K08298,RefSeq:WP_000349969.1,SO:0001217,UniParc:UPI0001C228A1,UniRef:UniRef100_A0A7I0KU55,UniRef:UniRef50_P31572,UniRef:UniRef90_P31572;ec_number=2.8.3.21
contig_1	Pyrodigal	gene	44780	45922	.	-	.	ID=GCA000010485_00042_gene;locus_tag=GCA000010485_00042;gene=caiA
contig_1	Pyrodigal	CDS	44780	45922	.	-	0	ID=GCA000010485_00042;Name=crotonobetainyl-CoA dehydrogenase;locus_tag=GCA000010485_00042;product=crotonobetainyl-CoA dehydrogenase;Dbxref=GO:0003995,GO:0005737,GO:0009437,GO:0016627,GO:0033539,GO:0050660;gene=caiA;Parent=GCA000010485_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000347117.1,SO:0001217,UniParc:UPI0000126E09,UniRef:UniRef100_P60584,UniRef:UniRef50_P60584,UniRef:UniRef90_P60584;ec_number=1.3.8.13
contig_1	Pyrodigal	gene	45954	47468	.	-	.	ID=GCA000010485_00043_gene;locus_tag=GCA000010485_00043;gene=caiT
contig_1	Pyrodigal	CDS	45954	47468	.	-	0	ID=GCA000010485_00043;Name=L-carnitine/gamma-butyrobetaine antiporter;locus_tag=GCA000010485_00043;product=L-carnitine/gamma-butyrobetaine antiporter;Dbxref=GO:0005886,GO:0009437,GO:0044667,GO:1900751;gene=caiT;Parent=GCA000010485_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,KEGG:K05245,RefSeq:WP_000787104.1,SO:0001217,UniParc:UPI0000126E1E,UniRef:UniRef100_B7UI86,UniRef:UniRef50_P31553,UniRef:UniRef90_P31553
contig_1	Pyrodigal	gene	47941	48711	.	+	.	ID=GCA000010485_00044_gene;locus_tag=GCA000010485_00044;gene=fixA
contig_1	Pyrodigal	CDS	47941	48711	.	+	0	ID=GCA000010485_00044;Name=Protein FixA;locus_tag=GCA000010485_00044;product=Protein FixA;Dbxref=GO:0009055,GO:0009437;gene=fixA;Parent=GCA000010485_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2086,KEGG:K03521,RefSeq:WP_000692217.1,SO:0001217,UniParc:UPI000019A629,UniRef:UniRef100_B7UI87,UniRef:UniRef50_P60566,UniRef:UniRef90_P60566
contig_1	Pyrodigal	gene	48726	49667	.	+	.	ID=GCA000010485_00045_gene;locus_tag=GCA000010485_00045;gene=fixB
contig_1	Pyrodigal	CDS	48726	49667	.	+	0	ID=GCA000010485_00045;Name=electron transfer flavoprotein subunit alpha/FixB family protein;locus_tag=GCA000010485_00045;product=electron transfer flavoprotein subunit alpha/FixB family protein;Dbxref=GO:0009055,GO:0009437,GO:0033539,GO:0050660;gene=fixB;Parent=GCA000010485_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2025,KEGG:K03522,RefSeq:WP_001091519.1,SO:0001217,UniParc:UPI0001C228AE,UniRef:UniRef100_A0A7I0KU43,UniRef:UniRef50_P31574,UniRef:UniRef90_P31574
contig_1	Pyrodigal	gene	49718	51004	.	+	.	ID=GCA000010485_00046_gene;locus_tag=GCA000010485_00046;gene=fixX
contig_1	Pyrodigal	CDS	49718	51004	.	+	0	ID=GCA000010485_00046;Name=ferredoxin-like protein FixX;locus_tag=GCA000010485_00046;product=ferredoxin-like protein FixX;Dbxref=GO:0016491,GO:0071949;gene=fixX;Parent=GCA000010485_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2440,KEGG:K00313,RefSeq:WP_001287715.1,SO:0001217,UniParc:UPI000012A7EB,UniRef:UniRef100_P68644,UniRef:UniRef50_P68646,UniRef:UniRef90_P68646;ec_number=1.5.5.-
contig_1	Pyrodigal	gene	51001	51288	.	+	.	ID=GCA000010485_00047_gene;locus_tag=GCA000010485_00047;gene=fixX
contig_1	Pyrodigal	CDS	51001	51288	.	+	0	ID=GCA000010485_00047;Name=ferredoxin-like protein FixX;locus_tag=GCA000010485_00047;product=ferredoxin-like protein FixX;Dbxref=GO:0016491,GO:0071949;gene=fixX;Parent=GCA000010485_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2440,KEGG:K00313,RefSeq:WP_000203741.1,SO:0001217,UniParc:UPI000012A804,UniRef:UniRef100_P68646,UniRef:UniRef50_P68646,UniRef:UniRef90_P68646;ec_number=1.5.5.-
contig_1	Pyrodigal	gene	51347	52678	.	+	.	ID=GCA000010485_00048_gene;locus_tag=GCA000010485_00048;gene=yaaU
contig_1	Pyrodigal	CDS	51347	52678	.	+	0	ID=GCA000010485_00048;Name=Putative metabolite transport protein YaaU;locus_tag=GCA000010485_00048;product=Putative metabolite transport protein YaaU;Dbxref=GO:0005886,GO:0006979,GO:0022857;gene=yaaU;Parent=GCA000010485_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001183207.1,SO:0001217,UniParc:UPI00000DE6E2,UniRef:UniRef100_A0A0D8VYP3,UniRef:UniRef50_P31679,UniRef:UniRef90_P31679
contig_1	Pyrodigal	gene	52786	53316	.	+	.	ID=GCA000010485_00049_gene;locus_tag=GCA000010485_00049;gene=kefF
contig_1	Pyrodigal	CDS	52786	53316	.	+	0	ID=GCA000010485_00049;Name=glutathione-regulated potassium-efflux system oxidoreductase KefF;locus_tag=GCA000010485_00049;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;Dbxref=GO:0005886,GO:0006813,GO:0008753,GO:0009055,GO:0010181,GO:0050136,GO:1901381;gene=kefF;Parent=GCA000010485_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000600725.1,SO:0001217,UniParc:UPI0000033C12,UniRef:UniRef100_P0A754,UniRef:UniRef50_P0A754,UniRef:UniRef90_P0A754;ec_number=1.6.5.2
contig_1	Pyrodigal	gene	53309	55171	.	+	.	ID=GCA000010485_00050_gene;locus_tag=GCA000010485_00050;gene=kefC
contig_1	Pyrodigal	CDS	53309	55171	.	+	0	ID=GCA000010485_00050;Name=glutathione-regulated potassium-efflux system protein KefC;locus_tag=GCA000010485_00050;product=glutathione-regulated potassium-efflux system protein KefC;Dbxref=GO:0005886,GO:0006813,GO:0015297,GO:0015503,GO:0015643,GO:0019899,GO:0051595,GO:1902600;gene=kefC;Parent=GCA000010485_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11745,RefSeq:WP_000377124.1,SO:0001217,UniParc:UPI000187B808,UniRef:UniRef100_B7UI93,UniRef:UniRef50_P03819,UniRef:UniRef90_P03819
contig_1	Pyrodigal	gene	55252	55842	.	+	.	ID=GCA000010485_00051_gene;locus_tag=GCA000010485_00051;gene=folA
contig_1	Pyrodigal	CDS	55252	55842	.	+	0	ID=GCA000010485_00051;Name=type 3 dihydrofolate reductase;locus_tag=GCA000010485_00051;product=type 3 dihydrofolate reductase;Dbxref=GO:0004146,GO:0046654;gene=folA;Parent=GCA000010485_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,SO:0001217,UniParc:UPI000170F074,UniRef:UniRef100_A0A024L7M8,UniRef:UniRef50_P31074,UniRef:UniRef90_C3TR68;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	55928	56161	.	+	.	ID=GCA000010485_00052_gene;locus_tag=GCA000010485_00052
contig_1	Pyrodigal	CDS	55928	56161	.	+	0	ID=GCA000010485_00052;Name=Antitoxin;locus_tag=GCA000010485_00052;product=Antitoxin;Parent=GCA000010485_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5302,COG:X,RefSeq:WP_000125566.1,SO:0001217,UniParc:UPI00000D0762,UniRef:UniRef100_E2QEX8,UniRef:UniRef50_E2QEX8,UniRef:UniRef90_E2QEX8
contig_1	Pyrodigal	gene	56164	56478	.	+	.	ID=GCA000010485_00053_gene;locus_tag=GCA000010485_00053;gene=ccdB
contig_1	Pyrodigal	CDS	56164	56478	.	+	0	ID=GCA000010485_00053;Name=Toxin CcdB;locus_tag=GCA000010485_00053;product=Toxin CcdB;gene=ccdB;Parent=GCA000010485_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19163,RefSeq:WP_001160966.1,SO:0001217,UniParc:UPI00000DE6E4,UniRef:UniRef100_E2QEX9,UniRef:UniRef50_E2QEX9,UniRef:UniRef90_A0A376W198
contig_1	Pyrodigal	gene	56475	57323	.	-	.	ID=GCA000010485_00054_gene;locus_tag=GCA000010485_00054;gene=apaH
contig_1	Pyrodigal	CDS	56475	57323	.	-	0	ID=GCA000010485_00054;Name=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;locus_tag=GCA000010485_00054;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;Dbxref=GO:0008803;gene=apaH;Parent=GCA000010485_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0639,COG:T,RefSeq:WP_000257181.1,SO:0001217,UniParc:UPI00005EFC9A,UniRef:UniRef100_B7MNQ8,UniRef:UniRef50_P05637,UniRef:UniRef90_P05637;ec_number=3.6.1.41
contig_1	Pyrodigal	gene	57330	57707	.	-	.	ID=GCA000010485_00055_gene;locus_tag=GCA000010485_00055;gene=apaG
contig_1	Pyrodigal	CDS	57330	57707	.	-	0	ID=GCA000010485_00055;Name=Co2+/Mg2+ efflux protein ApaG;locus_tag=GCA000010485_00055;product=Co2+/Mg2+ efflux protein ApaG;Dbxref=GO:0070987;gene=apaG;Parent=GCA000010485_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2967,COG:P,RefSeq:WP_000610901.1,SO:0001217,UniParc:UPI0000125BF2,UniRef:UniRef100_P62672,UniRef:UniRef50_Q56017,UniRef:UniRef90_Q56017
contig_1	Pyrodigal	gene	57710	58531	.	-	.	ID=GCA000010485_00056_gene;locus_tag=GCA000010485_00056;gene=rsmA
contig_1	Pyrodigal	CDS	57710	58531	.	-	0	ID=GCA000010485_00056;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA000010485_00056;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0052908;gene=rsmA;Parent=GCA000010485_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0030,COG:J,RefSeq:WP_001065363.1,SO:0001217,UniParc:UPI00000DE6E7,UniRef:UniRef100_B7UI99,UniRef:UniRef50_P06992,UniRef:UniRef90_P06992;ec_number=2.1.1.182
contig_1	Pyrodigal	gene	58528	59517	.	-	.	ID=GCA000010485_00057_gene;locus_tag=GCA000010485_00057;gene=pdxA
contig_1	Pyrodigal	CDS	58528	59517	.	-	0	ID=GCA000010485_00057;Name=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;locus_tag=GCA000010485_00057;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;Dbxref=GO:0000287,GO:0005737,GO:0008270,GO:0008615,GO:0042823,GO:0050570,GO:0050897,GO:0051287;gene=pdxA;Parent=GCA000010485_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1995,COG:H,KEGG:K00097,RefSeq:WP_000241227.1,SO:0001217,UniParc:UPI0001C228AF,UniRef:UniRef100_A0A066SX27,UniRef:UniRef50_P19624,UniRef:UniRef90_P19624;ec_number=1.1.1.262
contig_1	Pyrodigal	gene	59517	60803	.	-	.	ID=GCA000010485_00058_gene;locus_tag=GCA000010485_00058;gene=surA
contig_1	Pyrodigal	CDS	59517	60803	.	-	0	ID=GCA000010485_00058;Name=peptidylprolyl isomerase SurA;locus_tag=GCA000010485_00058;product=peptidylprolyl isomerase SurA;Dbxref=GO:0003755,GO:0006457,GO:0030288,GO:0042277,GO:0043165,GO:0050821,GO:0051082,GO:0060274,GO:0140839,GO:0140840;gene=surA;Parent=GCA000010485_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000800457.1,SO:0001217,UniParc:UPI0000136242,UniRef:UniRef100_P0ABZ6,UniRef:UniRef50_P0ABZ6,UniRef:UniRef90_P0ABZ6
contig_1	Pyrodigal	gene	60856	63210	.	-	.	ID=GCA000010485_00059_gene;locus_tag=GCA000010485_00059;gene=lptD
contig_1	Pyrodigal	CDS	60856	63210	.	-	0	ID=GCA000010485_00059;Name=LPS assembly protein LptD;locus_tag=GCA000010485_00059;product=LPS assembly protein LptD;Dbxref=GO:0009279,GO:0015920,GO:0019867,GO:0043165,GO:1990351;gene=lptD;Parent=GCA000010485_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1452,COG:M,RefSeq:WP_000746171.1,SO:0001217,UniParc:UPI0000DACCDC,UniRef:UniRef100_Q0TLT4,UniRef:UniRef50_P31554,UniRef:UniRef90_P31554
contig_1	Pyrodigal	gene	63465	64280	.	+	.	ID=GCA000010485_00060_gene;locus_tag=GCA000010485_00060;gene=djlA
contig_1	Pyrodigal	CDS	63465	64280	.	+	0	ID=GCA000010485_00060;Name=co-chaperone DjlA;locus_tag=GCA000010485_00060;product=co-chaperone DjlA;Dbxref=GO:0005886,GO:0051087;gene=djlA;Parent=GCA000010485_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_001200582.1,SO:0001217,UniParc:UPI0001C228B0,UniRef:UniRef100_F4STK1,UniRef:UniRef50_P31680,UniRef:UniRef90_P31680
contig_1	Pyrodigal	gene	64430	65089	.	-	.	ID=GCA000010485_00061_gene;locus_tag=GCA000010485_00061;gene=rluA
contig_1	Pyrodigal	CDS	64430	65089	.	-	0	ID=GCA000010485_00061;Name=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;locus_tag=GCA000010485_00061;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0008033,GO:0009451,GO:0009982,GO:0160142,GO:0160151;gene=rluA;Parent=GCA000010485_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06177,RefSeq:WP_000525176.1,SO:0001217,UniParc:UPI0000167FF8,UniRef:UniRef100_P0AA37,UniRef:UniRef50_P0AA37,UniRef:UniRef90_P0AA37;ec_number=5.4.99.29
contig_1	Pyrodigal	gene	65101	68007	.	-	.	ID=GCA000010485_00062_gene;locus_tag=GCA000010485_00062;gene=rapA
contig_1	Pyrodigal	CDS	65101	68007	.	-	0	ID=GCA000010485_00062;Name=RNA polymerase-associated protein RapA;locus_tag=GCA000010485_00062;product=RNA polymerase-associated protein RapA;Dbxref=GO:0003677,GO:0003682,GO:0004386,GO:0005524,GO:0006355,GO:0016817,GO:0031507,GO:0045944,GO:0140658,GO:0140750;gene=rapA;Parent=GCA000010485_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0553,COG:KL,RefSeq:WP_001117001.1,SO:0001217,UniParc:UPI00000DE6EB,UniRef:UniRef100_B7UIA5,UniRef:UniRef50_P60240,UniRef:UniRef90_P60240;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	68172	70523	.	-	.	ID=GCA000010485_00063_gene;locus_tag=GCA000010485_00063;gene=polB
contig_1	Pyrodigal	CDS	68172	70523	.	-	0	ID=GCA000010485_00063;Name=DNA polymerase II;locus_tag=GCA000010485_00063;product=DNA polymerase II;Dbxref=GO:0000166,GO:0003677,GO:0003887,GO:0006261,GO:0008296,GO:0009432,GO:0045004;gene=polB;Parent=GCA000010485_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02336,RefSeq:WP_000035603.1,SO:0001217,UniParc:UPI0001C228B1,UniRef:UniRef100_A0A7I0KU33,UniRef:UniRef50_P21189,UniRef:UniRef90_P21189;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	70598	71293	.	-	.	ID=GCA000010485_00064_gene;locus_tag=GCA000010485_00064;gene=araD
contig_1	Pyrodigal	CDS	70598	71293	.	-	0	ID=GCA000010485_00064;Name=L-ribulose-5-phosphate 4-epimerase;locus_tag=GCA000010485_00064;product=L-ribulose-5-phosphate 4-epimerase;Dbxref=GO:0005829,GO:0008270,GO:0008742,GO:0016832,GO:0019323,GO:0019568,GO:0019569;gene=araD;Parent=GCA000010485_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,RefSeq:WP_000888692.1,SO:0001217,UniParc:UPI0001C228B2,UniRef:UniRef100_A0A061KXT6,UniRef:UniRef50_P08203,UniRef:UniRef90_P08203;ec_number=5.1.3.4
contig_1	Pyrodigal	gene	71493	72995	.	-	.	ID=GCA000010485_00065_gene;locus_tag=GCA000010485_00065;gene=araA
contig_1	Pyrodigal	CDS	71493	72995	.	-	0	ID=GCA000010485_00065;Name=L-arabinose isomerase;locus_tag=GCA000010485_00065;product=L-arabinose isomerase;Dbxref=GO:0005829,GO:0005996,GO:0008733,GO:0019569;gene=araA;Parent=GCA000010485_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2160,COG:G,KEGG:K01804,RefSeq:WP_000151755.1,SO:0001217,UniParc:UPI0001C228B3,UniRef:UniRef100_A0A7I0KU38,UniRef:UniRef50_P08202,UniRef:UniRef90_P08202;ec_number=5.3.1.4
contig_1	Pyrodigal	gene	73006	74706	.	-	.	ID=GCA000010485_00066_gene;locus_tag=GCA000010485_00066;gene=araB
contig_1	Pyrodigal	CDS	73006	74706	.	-	0	ID=GCA000010485_00066;Name=ribulokinase;locus_tag=GCA000010485_00066;product=ribulokinase;Dbxref=GO:0005524,GO:0005737,GO:0008741,GO:0019150,GO:0019568,GO:0019569;gene=araB;Parent=GCA000010485_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1069,COG:G,RefSeq:WP_000951882.1,SO:0001217,UniParc:UPI0001C228B4,UniRef:UniRef100_A0A7I0KU20,UniRef:UniRef50_P08204,UniRef:UniRef90_P58541;ec_number=2.7.1.16
contig_1	Pyrodigal	gene	75045	75890	.	+	.	ID=GCA000010485_00067_gene;locus_tag=GCA000010485_00067;gene=araC
contig_1	Pyrodigal	CDS	75045	75890	.	+	0	ID=GCA000010485_00067;Name=arabinose operon transcriptional regulator AraC;locus_tag=GCA000010485_00067;product=arabinose operon transcriptional regulator AraC;Dbxref=GO:0003700,GO:0005737,GO:0006355,GO:0019568,GO:0043565;gene=araC;Parent=GCA000010485_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02099,RefSeq:WP_001545812.1,SO:0001217,UniParc:UPI0001C228B6,UniRef:UniRef100_A0A7I0L1F8,UniRef:UniRef50_P0A9E0,UniRef:UniRef90_P0A9E0
contig_1	Pyrodigal	gene	76114	77346	.	+	.	ID=GCA000010485_00068_gene;locus_tag=GCA000010485_00068
contig_1	Pyrodigal	CDS	76114	77346	.	+	0	ID=GCA000010485_00068;Name=Ribokinase;locus_tag=GCA000010485_00068;product=Ribokinase;Parent=GCA000010485_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000285500.1,SO:0001217,UniParc:UPI0001C228B7,UniRef:UniRef100_A0A066SP44,UniRef:UniRef50_A0A564H625,UniRef:UniRef90_A0A0K5HLB6
contig_1	Pyrodigal	gene	77372	78295	.	+	.	ID=GCA000010485_00069_gene;locus_tag=GCA000010485_00069
contig_1	Pyrodigal	CDS	77372	78295	.	+	0	ID=GCA000010485_00069;Name=Dihydrodipicolinate synthase;locus_tag=GCA000010485_00069;product=Dihydrodipicolinate synthase;Parent=GCA000010485_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848327.1,SO:0001217,UniParc:UPI0001C228B8,UniRef:UniRef100_A0A135XLR4,UniRef:UniRef50_V4QI91,UniRef:UniRef90_A0A376HQS4
contig_1	Pyrodigal	gene	78350	79303	.	+	.	ID=GCA000010485_00070_gene;locus_tag=GCA000010485_00070
contig_1	Pyrodigal	CDS	78350	79303	.	+	0	ID=GCA000010485_00070;Name=Periplasmic binding protein;locus_tag=GCA000010485_00070;product=Periplasmic binding protein;Parent=GCA000010485_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000831650.1,SO:0001217,UniParc:UPI0001C228B9,UniRef:UniRef100_A0A061KV68,UniRef:UniRef50_A0A0W8JF92,UniRef:UniRef90_B7LWE5
contig_1	Pyrodigal	gene	79352	79789	.	+	.	ID=GCA000010485_00071_gene;locus_tag=GCA000010485_00071
contig_1	Pyrodigal	CDS	79352	79789	.	+	0	ID=GCA000010485_00071;Name=Membrane protein;locus_tag=GCA000010485_00071;product=Membrane protein;Parent=GCA000010485_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07794,RefSeq:WP_001220297.1,SO:0001217,UniParc:UPI0002A215A3,UniRef:UniRef100_A0A7I0KU22,UniRef:UniRef50_A0A564H909,UniRef:UniRef90_B7LWE6
contig_1	Pyrodigal	gene	79799	81286	.	+	.	ID=GCA000010485_00072_gene;locus_tag=GCA000010485_00072
contig_1	Pyrodigal	CDS	79799	81286	.	+	0	ID=GCA000010485_00072;Name=DUF112 domain-containing protein;locus_tag=GCA000010485_00072;product=DUF112 domain-containing protein;Parent=GCA000010485_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07793,RefSeq:WP_000353208.1,SO:0001217,UniParc:UPI0001C228BB,UniRef:UniRef100_A0A7I0KVL7,UniRef:UniRef50_Q65VX2,UniRef:UniRef90_B7UIB5
contig_1	Pyrodigal	gene	81470	82234	.	+	.	ID=GCA000010485_00073_gene;locus_tag=GCA000010485_00073;gene=yabI
contig_1	Pyrodigal	CDS	81470	82234	.	+	0	ID=GCA000010485_00073;Name=Inner membrane protein YabI;locus_tag=GCA000010485_00073;product=Inner membrane protein YabI;Dbxref=GO:0005886,GO:0010212,GO:0043093;gene=yabI;Parent=GCA000010485_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_001148414.1,SO:0001217,UniParc:UPI0001C228BC,UniRef:UniRef100_A0A7I0KU27,UniRef:UniRef50_P30149,UniRef:UniRef90_P30149
contig_1	Pyrodigal	gene	82348	83046	.	-	.	ID=GCA000010485_00074_gene;locus_tag=GCA000010485_00074;gene=thiQ
contig_1	Pyrodigal	CDS	82348	83046	.	-	0	ID=GCA000010485_00074;Name=thiamine ABC transporter ATP-binding protein ThiQ;locus_tag=GCA000010485_00074;product=thiamine ABC transporter ATP-binding protein ThiQ;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0048502;gene=thiQ;Parent=GCA000010485_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3840,COG:H,RefSeq:WP_000916272.1,SO:0001217,UniParc:UPI0001C228BD,UniRef:UniRef100_A0A3K3NCW4,UniRef:UniRef50_Q8ZRV2,UniRef:UniRef90_P31548;ec_number=7.6.2.15
contig_1	Pyrodigal	gene	83030	84640	.	-	.	ID=GCA000010485_00075_gene;locus_tag=GCA000010485_00075;gene=thiP
contig_1	Pyrodigal	CDS	83030	84640	.	-	0	ID=GCA000010485_00075;Name=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;locus_tag=GCA000010485_00075;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;Dbxref=GO:0005886,GO:0015888,GO:0022857;gene=thiP;Parent=GCA000010485_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02063,RefSeq:WP_000235623.1,SO:0001217,UniParc:UPI0001C228E8,UniRef:UniRef100_A0A7I0KU31,UniRef:UniRef50_P31549,UniRef:UniRef90_P31549;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	84616	85599	.	-	.	ID=GCA000010485_00076_gene;locus_tag=GCA000010485_00076;gene=thiB
contig_1	Pyrodigal	CDS	84616	85599	.	-	0	ID=GCA000010485_00076;Name=thiamine ABC transporter substrate binding subunit;locus_tag=GCA000010485_00076;product=thiamine ABC transporter substrate binding subunit;Dbxref=GO:0015888,GO:0030288,GO:0030975,GO:0048502,GO:0055052;gene=thiB;Parent=GCA000010485_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02064,RefSeq:WP_001295765.1,SO:0001217,UniParc:UPI0001C228E9,UniRef:UniRef100_A0A061YL54,UniRef:UniRef50_A0A0G9FIF0,UniRef:UniRef90_A0A0G9FIF0
contig_1	Infernal	regulatory_region	85630	85729	1.9e-10	-	.	ID=EFPPCJGBKI_322;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	85763	87418	.	-	.	ID=GCA000010485_00077_gene;locus_tag=GCA000010485_00077;gene=sgrR
contig_1	Pyrodigal	CDS	85763	87418	.	-	0	ID=GCA000010485_00077;Name=DNA-binding transcriptional regulator SgrR;locus_tag=GCA000010485_00077;product=DNA-binding transcriptional regulator SgrR;Dbxref=GO:0003677,GO:0015833,GO:0045892,GO:0045893,GO:1904680;gene=sgrR;Parent=GCA000010485_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001138624,COG:COG4533,COG:K,RefSeq:WP_001311372.1,SO:0001217,UniParc:UPI0001C228EA,UniRef:UniRef100_A0A3L4YCS5,UniRef:UniRef50_P33595,UniRef:UniRef90_P33595
contig_1	Infernal	gene	87486	87712	.	+	.	ID=GCA000010485_00078_gene;locus_tag=GCA000010485_00078;gene=sgrS
contig_1	Infernal	ncRNA	87486	87712	3.5e-35	+	.	ID=GCA000010485_00078;Name=SgrS RNA;locus_tag=GCA000010485_00078;gene=sgrS;product=SgrS RNA;Dbxref=RFAM:RF00534;Parent=GCA000010485_00078_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00534
contig_1	Pyrodigal	gene	87507	87638	.	+	.	ID=GCA000010485_00079_gene;locus_tag=GCA000010485_00079;gene=sgrT
contig_1	Pyrodigal	CDS	87507	87638	.	+	0	ID=GCA000010485_00079;Name=Glucose uptake inhibitor SgrT;locus_tag=GCA000010485_00079;product=Glucose uptake inhibitor SgrT;gene=sgrT;Parent=GCA000010485_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001248776.1,SO:0001217,UniParc:UPI0002A28E9E,UniRef:UniRef100_A0A7I0L3C2,UniRef:UniRef50_C1P5Z7,UniRef:UniRef90_A0A3L5GVJ1
contig_1	Pyrodigal	gene	87745	88350	.	-	.	ID=GCA000010485_00080_gene;locus_tag=GCA000010485_00080;gene=leuD
contig_1	Pyrodigal	CDS	87745	88350	.	-	0	ID=GCA000010485_00080;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000010485_00080;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000010485_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0066,COG:E,RefSeq:WP_000818231.1,SO:0001217,UniParc:UPI00000DE6F8,UniRef:UniRef100_B7MAJ6,UniRef:UniRef50_P30126,UniRef:UniRef90_P30126;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	88361	89761	.	-	.	ID=GCA000010485_00081_gene;locus_tag=GCA000010485_00081;gene=leuC
contig_1	Pyrodigal	CDS	88361	89761	.	-	0	ID=GCA000010485_00081;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000010485_00081;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000010485_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0065,COG:E,KEGG:K01703,RefSeq:WP_001140652.1,SO:0001217,UniParc:UPI00000DE6FA,UniRef:UniRef100_P0A6A6,UniRef:UniRef50_P0A6A6,UniRef:UniRef90_P0A6A6;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	89764	90855	.	-	.	ID=GCA000010485_00082_gene;locus_tag=GCA000010485_00082;gene=leuB
contig_1	Pyrodigal	CDS	89764	90855	.	-	0	ID=GCA000010485_00082;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000010485_00082;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0003862,GO:0009098;gene=leuB;Parent=GCA000010485_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00052,RefSeq:WP_000042356.1,SO:0001217,UniParc:UPI00005F0CBA,UniRef:UniRef100_A0A377KD67,UniRef:UniRef50_A0A377KD67,UniRef:UniRef90_A0A377KD67;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	90855	92426	.	-	.	ID=GCA000010485_00083_gene;locus_tag=GCA000010485_00083;gene=leuA
contig_1	Pyrodigal	CDS	90855	92426	.	-	0	ID=GCA000010485_00083;Name=2-isopropylmalate synthase;locus_tag=GCA000010485_00083;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0003985,GO:0005829,GO:0009098,GO:0019752,GO:0030145;gene=leuA;Parent=GCA000010485_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,KEGG:K01649,RefSeq:WP_000082846.1,SO:0001217,UniParc:UPI00005E3A59,UniRef:UniRef100_A7ZHG6,UniRef:UniRef50_P15875,UniRef:UniRef90_P15875;ec_number=2.3.3.13
contig_1	Infernal	regulatory_region	92470	92618	2e-25	-	.	ID=EFPPCJGBKI_285;Name=Leucine operon leader;product=Leucine operon leader;Dbxref=RFAM:RF00512;inference=profile:Rfam:RF00512;Note=SO:0000140;regulatory_class=attenuator
contig_1	Bakta	gene	92518	92604	.	-	.	ID=GCA000010485_00084_gene;locus_tag=GCA000010485_00084;inference=ab initio prediction:Bakta;gene=leuL
contig_1	Bakta	CDS	92518	92604	.	-	0	ID=GCA000010485_00084;Name=leu operon leader peptide;locus_tag=GCA000010485_00084;product=leu operon leader peptide;Dbxref=GO:0009098;gene=leuL;Parent=GCA000010485_00084_gene;Note=RefSeq:WP_001300467.1,SO:0001217,UniParc:UPI000012E861,UniRef:UniRef100_P0AD79,UniRef:UniRef50_P0AD79,UniRef:UniRef90_P0AD79
contig_1	Pyrodigal	gene	93262	94206	.	+	.	ID=GCA000010485_00085_gene;locus_tag=GCA000010485_00085;gene=leuO
contig_1	Pyrodigal	CDS	93262	94206	.	+	0	ID=GCA000010485_00085;Name=transcriptional regulator LeuO;locus_tag=GCA000010485_00085;product=transcriptional regulator LeuO;Dbxref=GO:0003700,GO:0006355,GO:0032993,GO:0043565;gene=leuO;Parent=GCA000010485_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05798,RefSeq:WP_001295767.1,SO:0001217,UniParc:UPI00000DE6FE,UniRef:UniRef100_E2QF05,UniRef:UniRef50_P10151,UniRef:UniRef90_P10151
contig_1	Pyrodigal	gene	94524	96248	.	+	.	ID=GCA000010485_00086_gene;locus_tag=GCA000010485_00086;gene=ilvI
contig_1	Pyrodigal	CDS	94524	96248	.	+	0	ID=GCA000010485_00086;Name=acetolactate synthase 3 large subunit;locus_tag=GCA000010485_00086;product=acetolactate synthase 3 large subunit;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvI;Parent=GCA000010485_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_000425646.1,SO:0001217,UniParc:UPI0001608935,UniRef:UniRef100_A0A0J1XEC6,UniRef:UniRef50_P00893,UniRef:UniRef90_P00893;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	96251	96742	.	+	.	ID=GCA000010485_00087_gene;locus_tag=GCA000010485_00087;gene=ilvN
contig_1	Pyrodigal	CDS	96251	96742	.	+	0	ID=GCA000010485_00087;Name=acetolactate synthase small subunit;locus_tag=GCA000010485_00087;product=acetolactate synthase small subunit;Dbxref=GO:0003984,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:1990610;gene=ilvN;Parent=GCA000010485_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0440,COG:E,KEGG:K01653,RefSeq:WP_001252744.1,SO:0001217,UniParc:UPI000018F6AD,UniRef:UniRef100_C3TQT7,UniRef:UniRef50_P00894,UniRef:UniRef90_P00894;ec_number=2.2.1.6
contig_1	Bakta	gene	96754	96840	.	+	.	ID=GCA000010485_00088_gene;locus_tag=GCA000010485_00088;inference=ab initio prediction:Bakta;gene=fruL
contig_1	Bakta	CDS	96754	96840	.	+	0	ID=GCA000010485_00088;Name=Putative fruR/shl operon leader peptide;locus_tag=GCA000010485_00088;product=Putative fruR/shl operon leader peptide;gene=fruL;Parent=GCA000010485_00088_gene;Note=RefSeq:WP_001303787.1,SO:0001217,UniParc:UPI00000D0772,UniRef:UniRef100_P0ADF0,UniRef:UniRef50_P0ADF0,UniRef:UniRef90_P0ADF0
contig_1	Pyrodigal	gene	96922	97926	.	+	.	ID=GCA000010485_00089_gene;locus_tag=GCA000010485_00089;gene=cra
contig_1	Pyrodigal	CDS	96922	97926	.	+	0	ID=GCA000010485_00089;Name=catabolite repressor/activator;locus_tag=GCA000010485_00089;product=catabolite repressor/activator;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355,GO:0009750;gene=cra;Parent=GCA000010485_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03435,RefSeq:WP_000762401.1,SO:0001217,UniParc:UPI00000520C0,UniRef:UniRef100_P0ACP1,UniRef:UniRef50_P0ACP1,UniRef:UniRef90_P0ACP1
contig_1	Pyrodigal	gene	98528	98986	.	+	.	ID=GCA000010485_00090_gene;locus_tag=GCA000010485_00090;gene=mraZ
contig_1	Pyrodigal	CDS	98528	98986	.	+	0	ID=GCA000010485_00090;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000010485_00090;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000010485_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_001295770.1,SO:0001217,UniParc:UPI000012F540,UniRef:UniRef100_A7ZHH2,UniRef:UniRef50_P22186,UniRef:UniRef90_P22186
contig_1	Pyrodigal	gene	98988	99929	.	+	.	ID=GCA000010485_00091_gene;locus_tag=GCA000010485_00091;gene=rsmH
contig_1	Pyrodigal	CDS	98988	99929	.	+	0	ID=GCA000010485_00091;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000010485_00091;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000010485_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,RefSeq:WP_000970479.1,SO:0001217,UniParc:UPI000003EB5E,UniRef:UniRef100_P60390,UniRef:UniRef50_P60390,UniRef:UniRef90_P60390;ec_number=2.1.1.199
contig_1	Pyrodigal	gene	99926	100291	.	+	.	ID=GCA000010485_00092_gene;locus_tag=GCA000010485_00092;gene=ftsI
contig_1	Pyrodigal	CDS	99926	100291	.	+	0	ID=GCA000010485_00092;Name=penicillin-binding protein PBP3 FtsI;locus_tag=GCA000010485_00092;product=penicillin-binding protein PBP3 FtsI;Dbxref=GO:0000917,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0009410,GO:0032153,GO:0043093,GO:0051301,GO:0071555,GO:1990586;gene=ftsI;Parent=GCA000010485_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K03586,RefSeq:WP_000625658.1,SO:0001217,UniParc:UPI000003EB5F,UniRef:UniRef100_P0AD68,UniRef:UniRef50_P0AD68,UniRef:UniRef90_P0AD68;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	100307	102073	.	+	.	ID=GCA000010485_00093_gene;locus_tag=GCA000010485_00093;gene=ftsI
contig_1	Pyrodigal	CDS	100307	102073	.	+	0	ID=GCA000010485_00093;Name=peptidoglycan glycosyltransferase FtsI;locus_tag=GCA000010485_00093;product=peptidoglycan glycosyltransferase FtsI;Dbxref=GO:0000917,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0009410,GO:0032153,GO:0043093,GO:0051301,GO:0071555,GO:1990586;gene=ftsI;Parent=GCA000010485_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000642196,COG:COG0768,COG:DM,KEGG:K03586,RefSeq:WP_000642208.1,SO:0001217,UniParc:UPI0000D50611,UniRef:UniRef100_E2QF12,UniRef:UniRef50_P0AD68,UniRef:UniRef90_P0AD68;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	102060	103547	.	+	.	ID=GCA000010485_00094_gene;locus_tag=GCA000010485_00094;gene=murE
contig_1	Pyrodigal	CDS	102060	103547	.	+	0	ID=GCA000010485_00094;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;locus_tag=GCA000010485_00094;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0008360,GO:0008765,GO:0009058,GO:0009252,GO:0016881,GO:0051301,GO:0071555;gene=murE;Parent=GCA000010485_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_000775098.1,SO:0001217,UniParc:UPI0001C228EB,UniRef:UniRef100_A0A061YL42,UniRef:UniRef50_P22188,UniRef:UniRef90_P22188;ec_number=6.3.2.13
contig_1	Pyrodigal	gene	103544	104902	.	+	.	ID=GCA000010485_00095_gene;locus_tag=GCA000010485_00095;gene=murF
contig_1	Pyrodigal	CDS	103544	104902	.	+	0	ID=GCA000010485_00095;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000010485_00095;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008766,GO:0009058,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000010485_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,RefSeq:WP_000626694.1,SO:0001217,UniParc:UPI0001C228EC,UniRef:UniRef100_A0A066SWY0,UniRef:UniRef50_P11880,UniRef:UniRef90_P11880;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	104896	105978	.	+	.	ID=GCA000010485_00096_gene;locus_tag=GCA000010485_00096;gene=mraY
contig_1	Pyrodigal	CDS	104896	105978	.	+	0	ID=GCA000010485_00096;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000010485_00096;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000010485_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K01000,RefSeq:WP_000964131.1,SO:0001217,UniParc:UPI000003EB63,UniRef:UniRef100_P0A6W3,UniRef:UniRef50_P0A6W3,UniRef:UniRef90_P0A6W3;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	105981	107297	.	+	.	ID=GCA000010485_00097_gene;locus_tag=GCA000010485_00097;gene=murD
contig_1	Pyrodigal	CDS	105981	107297	.	+	0	ID=GCA000010485_00097;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000010485_00097;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000010485_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01925,RefSeq:WP_000796460.1,SO:0001217,UniParc:UPI00005EFD9C,UniRef:UniRef100_Q0TLQ1,UniRef:UniRef50_Q8ZRU4,UniRef:UniRef90_Q8ZRU4;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	107297	108541	.	+	.	ID=GCA000010485_00098_gene;locus_tag=GCA000010485_00098;gene=ftsW
contig_1	Pyrodigal	CDS	107297	108541	.	+	0	ID=GCA000010485_00098;Name=cell division protein FtsW;locus_tag=GCA000010485_00098;product=cell division protein FtsW;Dbxref=GO:0000917,GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0015648,GO:0032153,GO:0043093,GO:0051301,GO:0071555,GO:1990586;gene=ftsW;Parent=GCA000010485_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_001295532.1,SO:0001217,UniParc:UPI000003EB65,UniRef:UniRef100_P0ABG4,UniRef:UniRef50_P0ABG4,UniRef:UniRef90_P0ABG4;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	108538	109605	.	+	.	ID=GCA000010485_00099_gene;locus_tag=GCA000010485_00099;gene=murG
contig_1	Pyrodigal	CDS	108538	109605	.	+	0	ID=GCA000010485_00099;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000010485_00099;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000010485_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_000016567.1,SO:0001217,UniParc:UPI0001C228ED,UniRef:UniRef100_A0A0A2RW07,UniRef:UniRef50_P17443,UniRef:UniRef90_P17443;ec_number=2.4.1.227
contig_1	Pyrodigal	gene	109659	111134	.	+	.	ID=GCA000010485_00100_gene;locus_tag=GCA000010485_00100;gene=murC
contig_1	Pyrodigal	CDS	109659	111134	.	+	0	ID=GCA000010485_00100;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000010485_00100;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000010485_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_001096048.1,SO:0001217,UniParc:UPI000012F95E,UniRef:UniRef100_A7ZHI2,UniRef:UniRef50_P17952,UniRef:UniRef90_P17952;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	111127	112047	.	+	.	ID=GCA000010485_00101_gene;locus_tag=GCA000010485_00101;gene=ddlB
contig_1	Pyrodigal	CDS	111127	112047	.	+	0	ID=GCA000010485_00101;Name=D-alanine--D-alanine ligase;locus_tag=GCA000010485_00101;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddlB;Parent=GCA000010485_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000130056,BlastRules:WP_003157623,COG:COG1181,COG:MR,RefSeq:WP_000130072.1,SO:0001217,UniParc:UPI0001C228EE,UniRef:UniRef100_A0A066SSX2,UniRef:UniRef50_P07862,UniRef:UniRef90_P07862;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	112049	112879	.	+	.	ID=GCA000010485_00102_gene;locus_tag=GCA000010485_00102;gene=ftsQ
contig_1	Pyrodigal	CDS	112049	112879	.	+	0	ID=GCA000010485_00102;Name=cell division protein FtsQ;locus_tag=GCA000010485_00102;product=cell division protein FtsQ;Dbxref=GO:0005886,GO:0032153,GO:0043093,GO:0090529;gene=ftsQ;Parent=GCA000010485_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_000075744.1,SO:0001217,UniParc:UPI00000D0775,UniRef:UniRef100_C3TQL2,UniRef:UniRef50_P06136,UniRef:UniRef90_P06136
contig_1	Pyrodigal	gene	112876	114138	.	+	.	ID=GCA000010485_00103_gene;locus_tag=GCA000010485_00103;gene=ftsA
contig_1	Pyrodigal	CDS	112876	114138	.	+	0	ID=GCA000010485_00103;Name=cell division protein FtsA;locus_tag=GCA000010485_00103;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0009898,GO:0032153,GO:0043093,GO:0051301;gene=ftsA;Parent=GCA000010485_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_000588474.1,SO:0001217,UniParc:UPI000012ACAC,UniRef:UniRef100_P0ABH0,UniRef:UniRef50_P0ABH0,UniRef:UniRef90_P0ABH0
contig_1	Infernal	gene	114118	114207	.	+	.	ID=GCA000010485_00104_gene;locus_tag=GCA000010485_00104;gene=PssrA
contig_1	Infernal	ncRNA	114118	114207	3.7e-17	+	.	ID=GCA000010485_00104;Name=Plasmid-encoded Shigella sRNA A;locus_tag=GCA000010485_00104;product=Plasmid-encoded Shigella sRNA A;Dbxref=RFAM:RF02797;Parent=GCA000010485_00104_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02797
contig_1	Pyrodigal	gene	114199	115350	.	+	.	ID=GCA000010485_00105_gene;locus_tag=GCA000010485_00105;gene=ftsZ
contig_1	Pyrodigal	CDS	114199	115350	.	+	0	ID=GCA000010485_00105;Name=cell division protein FtsZ;locus_tag=GCA000010485_00105;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258;gene=ftsZ;Parent=GCA000010485_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_000462776.1,SO:0001217,UniParc:UPI0000047C69,UniRef:UniRef100_P0A9A6,UniRef:UniRef50_P0A9A6,UniRef:UniRef90_P0A9A6
contig_1	Pyrodigal	gene	115451	116368	.	+	.	ID=GCA000010485_00106_gene;locus_tag=GCA000010485_00106;gene=lpxC
contig_1	Pyrodigal	CDS	115451	116368	.	+	0	ID=GCA000010485_00106;Name=UDP-3-O-acyl-N-acetylglucosamine deacetylase;locus_tag=GCA000010485_00106;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;Dbxref=GO:0009245,GO:0016020,GO:0046872,GO:0103117;gene=lpxC;Parent=GCA000010485_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0774,COG:M,RefSeq:WP_000595482.1,SO:0001217,UniParc:UPI000012E8DC,UniRef:UniRef100_P0A725,UniRef:UniRef50_P0A725,UniRef:UniRef90_P0A725;ec_number=3.5.1.108
contig_1	Pyrodigal	gene	116523	117110	.	+	.	ID=GCA000010485_00107_gene;locus_tag=GCA000010485_00107;gene=secM
contig_1	Pyrodigal	CDS	116523	117110	.	+	0	ID=GCA000010485_00107;Name=secA translation cis-regulator SecM;locus_tag=GCA000010485_00107;product=secA translation cis-regulator SecM;Dbxref=GO:0005829,GO:0042597,GO:0045182;gene=secM;Parent=GCA000010485_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13301,SO:0001217,UniRef:UniRef50_P62395,UniRef:UniRef90_P62395
contig_1	Pyrodigal	gene	117172	119877	.	+	.	ID=GCA000010485_00108_gene;locus_tag=GCA000010485_00108;gene=secA
contig_1	Pyrodigal	CDS	117172	119877	.	+	0	ID=GCA000010485_00108;Name=preprotein translocase subunit SecA;locus_tag=GCA000010485_00108;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0006605,GO:0006886,GO:0008564,GO:0017038,GO:0031522,GO:0043952,GO:0046872,GO:0065002;gene=secA;Parent=GCA000010485_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,KEGG:K03070,RefSeq:WP_000905766.1,SO:0001217,UniParc:UPI000187B963,UniRef:UniRef100_B7UIE8,UniRef:UniRef50_P10408,UniRef:UniRef90_P10408;ec_number=7.4.2.8
contig_1	Infernal	gene	119853	119922	.	+	.	ID=GCA000010485_00109_gene;locus_tag=GCA000010485_00109;gene=STnc40
contig_1	Infernal	ncRNA	119853	119922	4.5e-14	+	.	ID=GCA000010485_00109;Name=Salmonella enterica sRNA STnc40;locus_tag=GCA000010485_00109;product=Salmonella enterica sRNA STnc40;Dbxref=RFAM:RF02057;Parent=GCA000010485_00109_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02057
contig_1	Pyrodigal	gene	119937	120335	.	+	.	ID=GCA000010485_00110_gene;locus_tag=GCA000010485_00110;gene=mutT
contig_1	Pyrodigal	CDS	119937	120335	.	+	0	ID=GCA000010485_00110;Name=8-oxo-dGTP diphosphatase MutT;locus_tag=GCA000010485_00110;product=8-oxo-dGTP diphosphatase MutT;Dbxref=GO:0000287,GO:0006203,GO:0006260,GO:0006281,GO:0006289,GO:0008413,GO:0030145,GO:0035539,GO:0044715,GO:0044716,GO:0046067;gene=mutT;Parent=GCA000010485_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,RefSeq:WP_000736048.1,SO:0001217,UniParc:UPI0001C228F0,UniRef:UniRef100_A0A066SP99,UniRef:UniRef50_P08337,UniRef:UniRef90_P08337;ec_number=3.6.1.55
contig_1	Infernal	gene	120326	120401	.	+	.	ID=GCA000010485_00111_gene;locus_tag=GCA000010485_00111;gene=naRNA4
contig_1	Infernal	ncRNA	120326	120401	1.8e-08	+	.	ID=GCA000010485_00111;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00111;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00111_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	120423	120620	.	-	.	ID=GCA000010485_00112_gene;locus_tag=GCA000010485_00112;gene=yacG
contig_1	Pyrodigal	CDS	120423	120620	.	-	0	ID=GCA000010485_00112;Name=DNA gyrase inhibitor YacG;locus_tag=GCA000010485_00112;product=DNA gyrase inhibitor YacG;Dbxref=GO:0006355,GO:0008270,GO:0008657;gene=yacG;Parent=GCA000010485_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3024,COG:L,RefSeq:WP_000005042.1,SO:0001217,UniParc:UPI000013A025,UniRef:UniRef100_P0A8H8,UniRef:UniRef50_P0A8H8,UniRef:UniRef90_P0A8H8
contig_1	Pyrodigal	gene	120630	121373	.	-	.	ID=GCA000010485_00113_gene;locus_tag=GCA000010485_00113;gene=zapD
contig_1	Pyrodigal	CDS	120630	121373	.	-	0	ID=GCA000010485_00113;Name=cell division protein ZapD;locus_tag=GCA000010485_00113;product=cell division protein ZapD;Dbxref=GO:0000917,GO:0005737,GO:0032153,GO:0043093;gene=zapD;Parent=GCA000010485_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4582,COG:D,KEGG:K18778,RefSeq:WP_001194731.1,SO:0001217,UniParc:UPI00000DE70A,UniRef:UniRef100_B7UIF1,UniRef:UniRef50_P36680,UniRef:UniRef90_P36680
contig_1	Pyrodigal	gene	121373	121993	.	-	.	ID=GCA000010485_00114_gene;locus_tag=GCA000010485_00114;gene=coaE
contig_1	Pyrodigal	CDS	121373	121993	.	-	0	ID=GCA000010485_00114;Name=dephospho-CoA kinase;locus_tag=GCA000010485_00114;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA000010485_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_001269520.1,SO:0001217,UniParc:UPI0000127CDD,UniRef:UniRef100_P0A6I9,UniRef:UniRef50_P0A6I9,UniRef:UniRef90_P0A6I9;ec_number=2.7.1.24
contig_1	Bakta	gene	122018	122062	.	+	.	ID=GCA000010485_00115_gene;locus_tag=GCA000010485_00115;inference=ab initio prediction:Bakta;gene=yacM
contig_1	Bakta	CDS	122018	122062	.	+	0	ID=GCA000010485_00115;Name=Protein YacM;locus_tag=GCA000010485_00115;product=Protein YacM;gene=yacM;Parent=GCA000010485_00115_gene;Note=RefSeq:WP_120795372.1,SO:0001217,UniParc:UPI000E46656E,UniRef:UniRef100_P0DPM6,UniRef:UniRef50_P0DPM6,UniRef:UniRef90_P0DPM6
contig_1	Pyrodigal	gene	122218	123261	.	+	.	ID=GCA000010485_00116_gene;locus_tag=GCA000010485_00116;gene=guaC
contig_1	Pyrodigal	CDS	122218	123261	.	+	0	ID=GCA000010485_00116;Name=GMP reductase;locus_tag=GCA000010485_00116;product=GMP reductase;Dbxref=GO:0003920,GO:0005829,GO:0006163,GO:0009117,GO:0046872,GO:1902560;gene=guaC;Parent=GCA000010485_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0516,COG:F,RefSeq:WP_001217320.1,SO:0001217,UniParc:UPI0001C2291C,UniRef:UniRef100_A0A066SP01,UniRef:UniRef50_P60560,UniRef:UniRef90_P60560;ec_number=1.7.1.7
contig_1	Pyrodigal	gene	123296	124498	.	-	.	ID=GCA000010485_00117_gene;locus_tag=GCA000010485_00117;gene=hofC
contig_1	Pyrodigal	CDS	123296	124498	.	-	0	ID=GCA000010485_00117;Name=protein transport protein HofC;locus_tag=GCA000010485_00117;product=protein transport protein HofC;Dbxref=GO:0004827,GO:0005886,GO:0015628;gene=hofC;Parent=GCA000010485_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02505,RefSeq:WP_000157289.1,SO:0001217,UniParc:UPI0000DACCE0,UniRef:UniRef100_A0A066SP94,UniRef:UniRef50_P36646,UniRef:UniRef90_P36646
contig_1	Pyrodigal	gene	124488	125873	.	-	.	ID=GCA000010485_00118_gene;locus_tag=GCA000010485_00118;gene=gspE
contig_1	Pyrodigal	CDS	124488	125873	.	-	0	ID=GCA000010485_00118;Name=type II secretion system protein GspE;locus_tag=GCA000010485_00118;product=type II secretion system protein GspE;Dbxref=GO:0005524,GO:0005886,GO:0016887;gene=gspE;Parent=GCA000010485_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02682,RefSeq:WP_001025180.1,SO:0001217,UniParc:UPI00000DE70D,UniRef:UniRef100_A0A135PPU7,UniRef:UniRef50_P36645,UniRef:UniRef90_P36645
contig_1	Pyrodigal	gene	125883	126323	.	-	.	ID=GCA000010485_00119_gene;locus_tag=GCA000010485_00119;gene=ppdD
contig_1	Pyrodigal	CDS	125883	126323	.	-	0	ID=GCA000010485_00119;Name=prepilin peptidase-dependent pilin;locus_tag=GCA000010485_00119;product=prepilin peptidase-dependent pilin;Dbxref=GO:0016020,GO:0043107,GO:0044096;gene=ppdD;Parent=GCA000010485_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4969,COG:NW,KEGG:K02682,RefSeq:WP_000360914.1,SO:0001217,UniParc:UPI00005EFCEB,UniRef:UniRef100_A0A067HWF3,UniRef:UniRef50_P36647,UniRef:UniRef90_P36647
contig_1	Pyrodigal	gene	126527	127420	.	-	.	ID=GCA000010485_00120_gene;locus_tag=GCA000010485_00120;gene=nadC
contig_1	Pyrodigal	CDS	126527	127420	.	-	0	ID=GCA000010485_00120;Name=carboxylating nicotinate-nucleotide diphosphorylase;locus_tag=GCA000010485_00120;product=carboxylating nicotinate-nucleotide diphosphorylase;Dbxref=GO:0004514,GO:0005737,GO:0005829,GO:0009435,GO:0034213,GO:0034628;gene=nadC;Parent=GCA000010485_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0157,COG:H,KEGG:K00767,RefSeq:WP_001135168.1,SO:0001217,UniParc:UPI00000D0863,UniRef:UniRef100_C3TQD7,UniRef:UniRef50_P30011,UniRef:UniRef90_P30011;ec_number=2.4.2.19
contig_1	Pyrodigal	gene	127508	128059	.	+	.	ID=GCA000010485_00121_gene;locus_tag=GCA000010485_00121;gene=ampD
contig_1	Pyrodigal	CDS	127508	128059	.	+	0	ID=GCA000010485_00121;Name=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;locus_tag=GCA000010485_00121;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;Dbxref=GO:0005737,GO:0008745,GO:0009253,GO:0009254,GO:0009392,GO:0046872,GO:0071555;gene=ampD;Parent=GCA000010485_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3023,COG:M,RefSeq:WP_000923703.1,SO:0001217,UniParc:UPI00005EFCED,UniRef:UniRef100_A0A066SNZ6,UniRef:UniRef50_P82974,UniRef:UniRef90_P13016;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	128056	128910	.	+	.	ID=GCA000010485_00122_gene;locus_tag=GCA000010485_00122;gene=ampE
contig_1	Pyrodigal	CDS	128056	128910	.	+	0	ID=GCA000010485_00122;Name=beta-lactamase regulator AmpE;locus_tag=GCA000010485_00122;product=beta-lactamase regulator AmpE;Dbxref=GO:0005886,GO:0046677;gene=ampE;Parent=GCA000010485_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3725,COG:V,KEGG:K03807,RefSeq:WP_000171980.1,SO:0001217,UniParc:UPI0001C2291D,UniRef:UniRef100_A0A061KV33,UniRef:UniRef50_P0AE14,UniRef:UniRef90_P0AE14
contig_1	Pyrodigal	gene	128953	130323	.	-	.	ID=GCA000010485_00123_gene;locus_tag=GCA000010485_00123;gene=aroP
contig_1	Pyrodigal	CDS	128953	130323	.	-	0	ID=GCA000010485_00123;Name=aromatic amino acid transporter AroP;locus_tag=GCA000010485_00123;product=aromatic amino acid transporter AroP;Dbxref=GO:0005886,GO:0006865,GO:0055085;gene=aroP;Parent=GCA000010485_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000399017.1,SO:0001217,UniParc:UPI00000DE710,UniRef:UniRef100_Q8FL49,UniRef:UniRef50_P24207,UniRef:UniRef90_P15993
contig_1	Pyrodigal	gene	130851	132632	.	+	.	ID=GCA000010485_00124_gene;locus_tag=GCA000010485_00124
contig_1	Pyrodigal	CDS	130851	132632	.	+	0	ID=GCA000010485_00124;Name=Type VI secretion system tube protein Hcp;locus_tag=GCA000010485_00124;product=Type VI secretion system tube protein Hcp;Parent=GCA000010485_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06887,RefSeq:WP_000502513.1,SO:0001217,UniParc:UPI0001C2291E,UniRef:UniRef100_A0A061YH55,UniRef:UniRef50_A8AJ94,UniRef:UniRef90_A0A3L4BG36
contig_1	Pyrodigal	gene	132635	132919	.	+	.	ID=GCA000010485_00125_gene;locus_tag=GCA000010485_00125
contig_1	Pyrodigal	CDS	132635	132919	.	+	0	ID=GCA000010485_00125;Name=Bacteriocin immunity protein;locus_tag=GCA000010485_00125;product=Bacteriocin immunity protein;Parent=GCA000010485_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000471924.1,SO:0001217,UniParc:UPI0001C2291F,UniRef:UniRef100_A0A061KX17,UniRef:UniRef50_A0A0H2YVH6,UniRef:UniRef90_A0A061KX17
contig_1	Pyrodigal	gene	133327	133617	.	+	.	ID=GCA000010485_00126_gene;locus_tag=GCA000010485_00126
contig_1	Pyrodigal	CDS	133327	133617	.	+	0	ID=GCA000010485_00126;Name=Bacteriocin immunity protein;locus_tag=GCA000010485_00126;product=Bacteriocin immunity protein;Parent=GCA000010485_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000282227.1,SO:0001217,UniParc:UPI0000DACCE3,UniRef:UniRef100_A0A066SSV4,UniRef:UniRef50_A0A0H2YVH6,UniRef:UniRef90_Q8VV19
contig_1	Pyrodigal	gene	134026	134316	.	+	.	ID=GCA000010485_00127_gene;locus_tag=GCA000010485_00127
contig_1	Pyrodigal	CDS	134026	134316	.	+	0	ID=GCA000010485_00127;Name=Bacteriocin immunity protein;locus_tag=GCA000010485_00127;product=Bacteriocin immunity protein;Parent=GCA000010485_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000543776.1,SO:0001217,UniParc:UPI00020DF3C9,UniRef:UniRef100_A0A8G8PFQ6,UniRef:UniRef50_A9MMY4,UniRef:UniRef90_Q8VV25
contig_1	Pyrodigal	gene	134724	135014	.	+	.	ID=GCA000010485_00128_gene;locus_tag=GCA000010485_00128
contig_1	Pyrodigal	CDS	134724	135014	.	+	0	ID=GCA000010485_00128;Name=Bacteriocin immunity protein;locus_tag=GCA000010485_00128;product=Bacteriocin immunity protein;Parent=GCA000010485_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000282229.1,SO:0001217,UniParc:UPI00000B47AA,UniRef:UniRef100_Q8VV17,UniRef:UniRef50_A0A0H2YVH6,UniRef:UniRef90_Q8VV19
contig_1	Pyrodigal	gene	135470	136234	.	+	.	ID=GCA000010485_00129_gene;locus_tag=GCA000010485_00129;gene=pdhR
contig_1	Pyrodigal	CDS	135470	136234	.	+	0	ID=GCA000010485_00129;Name=pyruvate dehydrogenase complex transcriptional repressor PdhR;locus_tag=GCA000010485_00129;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;Dbxref=GO:0003677,GO:0003700;gene=pdhR;Parent=GCA000010485_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000331776.1,SO:0001217,UniParc:UPI00001314AB,UniRef:UniRef100_P0ACL9,UniRef:UniRef50_P0ACL9,UniRef:UniRef90_P0ACL9
contig_1	Infernal	gene	136279	136392	.	-	.	ID=GCA000010485_00130_gene;locus_tag=GCA000010485_00130;gene=tp2
contig_1	Infernal	ncRNA	136279	136392	1.2e-18	-	.	ID=GCA000010485_00130;Name=tp2;locus_tag=GCA000010485_00130;product=tp2;Dbxref=RFAM:RF02030;Parent=GCA000010485_00130_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02030
contig_1	Pyrodigal	gene	136395	139058	.	+	.	ID=GCA000010485_00131_gene;locus_tag=GCA000010485_00131;gene=aceE
contig_1	Pyrodigal	CDS	136395	139058	.	+	0	ID=GCA000010485_00131;Name=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;locus_tag=GCA000010485_00131;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;Dbxref=GO:0000287,GO:0004738,GO:0004739,GO:0005829,GO:0006086,GO:0016020,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0042867,GO:0045254,GO:0060090;gene=aceE;Parent=GCA000010485_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2609,KEGG:K00163,RefSeq:WP_000003820.1,SO:0001217,UniParc:UPI00000480B7,UniRef:UniRef100_P0AFG8,UniRef:UniRef50_P0AFG8,UniRef:UniRef90_P0AFG8;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	139073	140965	.	+	.	ID=GCA000010485_00132_gene;locus_tag=GCA000010485_00132;gene=aceF
contig_1	Pyrodigal	CDS	139073	140965	.	+	0	ID=GCA000010485_00132;Name=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;locus_tag=GCA000010485_00132;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;Dbxref=GO:0004742,GO:0005737,GO:0006086,GO:0006090,GO:0006096,GO:0016407,GO:0031405,GO:0042867,GO:0045254;gene=aceF;Parent=GCA000010485_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000963539.1,SO:0001217,UniParc:UPI0001C22921,UniRef:UniRef100_A0A061YC03,UniRef:UniRef50_P06959,UniRef:UniRef90_P06959;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	141173	142597	.	+	.	ID=GCA000010485_00133_gene;locus_tag=GCA000010485_00133;gene=lpdA
contig_1	Pyrodigal	CDS	141173	142597	.	+	0	ID=GCA000010485_00133;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000010485_00133;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0050660;gene=lpdA;Parent=GCA000010485_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_000102485.1,SO:0001217,UniParc:UPI000016539B,UniRef:UniRef100_P0A9P0,UniRef:UniRef50_P0A9P0,UniRef:UniRef90_P0A9P0;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	142668	144431	.	-	.	ID=GCA000010485_00134_gene;locus_tag=GCA000010485_00134;gene=yacH
contig_1	Pyrodigal	CDS	142668	144431	.	-	0	ID=GCA000010485_00134;Name=putative protein YacH;locus_tag=GCA000010485_00134;product=putative protein YacH;gene=yacH;Parent=GCA000010485_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784417.1,SO:0001217,UniParc:UPI0001C22922,UniRef:UniRef100_A0A061YG67,UniRef:UniRef50_P36682,UniRef:UniRef90_P36682
contig_1	Pyrodigal	gene	144786	147383	.	+	.	ID=GCA000010485_00135_gene;locus_tag=GCA000010485_00135;gene=acnB
contig_1	Pyrodigal	CDS	144786	147383	.	+	0	ID=GCA000010485_00135;Name=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;locus_tag=GCA000010485_00135;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0005829,GO:0006099,GO:0019629,GO:0046872,GO:0047456,GO:0051539;gene=acnB;Parent=GCA000010485_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1049,KEGG:K01682,RefSeq:WP_001295775.1,SO:0001217,UniParc:UPI00005EFCF3,UniRef:UniRef100_E2QF48,UniRef:UniRef50_P36683,UniRef:UniRef90_P36683;ec_number=4.2.1.99
contig_1	Pyrodigal	gene	147558	147920	.	+	.	ID=GCA000010485_00136_gene;locus_tag=GCA000010485_00136;gene=yacL
contig_1	Pyrodigal	CDS	147558	147920	.	+	0	ID=GCA000010485_00136;Name=protein YacL;locus_tag=GCA000010485_00136;product=protein YacL;gene=yacL;Parent=GCA000010485_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3112,COG:S,RefSeq:WP_000384306.1,SO:0001217,UniParc:UPI000013A02A,UniRef:UniRef100_P0A8E5,UniRef:UniRef50_P0A8E5,UniRef:UniRef90_P0A8E5
contig_1	Pyrodigal	gene	147958	148752	.	-	.	ID=GCA000010485_00137_gene;locus_tag=GCA000010485_00137;gene=speD
contig_1	Pyrodigal	CDS	147958	148752	.	-	0	ID=GCA000010485_00137;Name=adenosylmethionine decarboxylase;locus_tag=GCA000010485_00137;product=adenosylmethionine decarboxylase;Dbxref=GO:0004014,GO:0005829,GO:0008295;gene=speD;Parent=GCA000010485_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1586,COG:E,RefSeq:WP_000734302.1,SO:0001217,UniParc:UPI00000DE718,UniRef:UniRef100_B7MBA3,UniRef:UniRef50_P0A7F6,UniRef:UniRef90_P0A7F6;ec_number=4.1.1.50
contig_1	Pyrodigal	gene	148768	149634	.	-	.	ID=GCA000010485_00138_gene;locus_tag=GCA000010485_00138;gene=speE
contig_1	Pyrodigal	CDS	148768	149634	.	-	0	ID=GCA000010485_00138;Name=polyamine aminopropyltransferase;locus_tag=GCA000010485_00138;product=polyamine aminopropyltransferase;Dbxref=GO:0004766,GO:0005829,GO:0008295;gene=speE;Parent=GCA000010485_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0421,COG:E,RefSeq:WP_000818414.1,SO:0001217,UniParc:UPI000016539D,UniRef:UniRef100_P66834,UniRef:UniRef50_P09158,UniRef:UniRef90_P09158;ec_number=2.5.1.16
contig_1	Pyrodigal	gene	149740	150048	.	-	.	ID=GCA000010485_00139_gene;locus_tag=GCA000010485_00139;gene=yacC
contig_1	Pyrodigal	CDS	149740	150048	.	-	0	ID=GCA000010485_00139;Name=YacC family pilotin-like protein;locus_tag=GCA000010485_00139;product=YacC family pilotin-like protein;gene=yacC;Parent=GCA000010485_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6002,COG:U,RefSeq:WP_001306210.1,SO:0001217,UniParc:UPI0001A5C1B5,UniRef:UniRef100_A0A0D6HYY1,UniRef:UniRef50_E0SBM7,UniRef:UniRef90_A0A090UZ50
contig_1	Pyrodigal	gene	150253	151803	.	+	.	ID=GCA000010485_00140_gene;locus_tag=GCA000010485_00140;gene=cueO
contig_1	Pyrodigal	CDS	150253	151803	.	+	0	ID=GCA000010485_00140;Name=multicopper oxidase CueO;locus_tag=GCA000010485_00140;product=multicopper oxidase CueO;Dbxref=GO:0004322,GO:0005507,GO:0010273,GO:0016491,GO:0016682,GO:0016722,GO:0016724,GO:0030288,GO:0042597,GO:0046688;gene=cueO;Parent=GCA000010485_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2132,COG:DPM,KEGG:K14588,RefSeq:WP_001189625.1,SO:0001217,UniParc:UPI0001C22923,UniRef:UniRef100_A0A7I0KTX2,UniRef:UniRef50_P36649,UniRef:UniRef90_P36649;ec_number=1.16.3.4
contig_1	Pyrodigal	gene	151850	154240	.	-	.	ID=GCA000010485_00141_gene;locus_tag=GCA000010485_00141;gene=gcd
contig_1	Pyrodigal	CDS	151850	154240	.	-	0	ID=GCA000010485_00141;Name=quinoprotein glucose dehydrogenase;locus_tag=GCA000010485_00141;product=quinoprotein glucose dehydrogenase;Dbxref=GO:0000287,GO:0005886,GO:0008876,GO:0016020,GO:0019595,GO:0030288,GO:0048039,GO:0070968;gene=gcd;Parent=GCA000010485_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001306211,COG:COG4993,COG:G,RefSeq:WP_001545813.1,SO:0001217,UniParc:UPI0001C22924,UniRef:UniRef100_A0A641BHR4,UniRef:UniRef50_P15877,UniRef:UniRef90_P15877;ec_number=1.1.5.2
contig_1	Pyrodigal	gene	154434	154982	.	+	.	ID=GCA000010485_00142_gene;locus_tag=GCA000010485_00142;gene=hpt
contig_1	Pyrodigal	CDS	154434	154982	.	+	0	ID=GCA000010485_00142;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA000010485_00142;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004422,GO:0005829,GO:0006166,GO:0006178,GO:0032263,GO:0032264,GO:0032991,GO:0042802,GO:0046100,GO:0051289,GO:0052657,GO:0097216;gene=hpt;Parent=GCA000010485_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0634,COG:F,KEGG:K00760,SO:0001217,UniParc:UPI00019F3BDF,UniRef:UniRef100_A0A0D6I022,UniRef:UniRef50_P0A9M2,UniRef:UniRef90_P0A9M2;ec_number=2.4.2.8
contig_1	Pyrodigal	gene	155023	155685	.	-	.	ID=GCA000010485_00143_gene;locus_tag=GCA000010485_00143;gene=can
contig_1	Pyrodigal	CDS	155023	155685	.	-	0	ID=GCA000010485_00143;Name=carbonate dehydratase;locus_tag=GCA000010485_00143;product=carbonate dehydratase;Dbxref=GO:0004089,GO:0008270,GO:0015976;gene=can;Parent=GCA000010485_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0288,COG:P,KEGG:K01673,RefSeq:WP_000651599.1,SO:0001217,UniParc:UPI000011315E,UniRef:UniRef100_P61517,UniRef:UniRef50_P61517,UniRef:UniRef90_P61517;ec_number=4.2.1.1
contig_1	Pyrodigal	gene	155794	156720	.	+	.	ID=GCA000010485_00144_gene;locus_tag=GCA000010485_00144;gene=yadG
contig_1	Pyrodigal	CDS	155794	156720	.	+	0	ID=GCA000010485_00144;Name=putative ABC transporter ATP-binding protein YadG;locus_tag=GCA000010485_00144;product=putative ABC transporter ATP-binding protein YadG;Dbxref=GO:0005524,GO:0005886,GO:0010165,GO:0016887;gene=yadG;Parent=GCA000010485_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000150638.1,SO:0001217,UniParc:UPI00000DE71B,UniRef:UniRef100_E2QF57,UniRef:UniRef50_P36879,UniRef:UniRef90_P36879
contig_1	Pyrodigal	gene	156717	157487	.	+	.	ID=GCA000010485_00145_gene;locus_tag=GCA000010485_00145;gene=yadH
contig_1	Pyrodigal	CDS	156717	157487	.	+	0	ID=GCA000010485_00145;Name=Transport permease protein;locus_tag=GCA000010485_00145;product=Transport permease protein;gene=yadH;Parent=GCA000010485_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_000972208.1,SO:0001217,UniParc:UPI000188516A,UniRef:UniRef100_A0A1M0D2F5,UniRef:UniRef50_P0AFN6,UniRef:UniRef90_A0A2X3E5R3
contig_1	Pyrodigal	gene	157592	158032	.	+	.	ID=GCA000010485_00146_gene;locus_tag=GCA000010485_00146;gene=yadI
contig_1	Pyrodigal	CDS	157592	158032	.	+	0	ID=GCA000010485_00146;Name=Putative phosphotransferase enzyme IIA component YadI;locus_tag=GCA000010485_00146;product=Putative phosphotransferase enzyme IIA component YadI;Dbxref=GO:0005737,GO:0009401,GO:0016020,GO:0016301;gene=yadI;Parent=GCA000010485_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2893,COG:G,RefSeq:WP_000901994.1,SO:0001217,UniParc:UPI00005EF9BF,UniRef:UniRef100_A0A066SWU0,UniRef:UniRef50_P36881,UniRef:UniRef90_P36881
contig_1	Pyrodigal	gene	158096	159325	.	+	.	ID=GCA000010485_00147_gene;locus_tag=GCA000010485_00147;gene=yadE
contig_1	Pyrodigal	CDS	158096	159325	.	+	0	ID=GCA000010485_00147;Name=putative protein YadE;locus_tag=GCA000010485_00147;product=putative protein YadE;Dbxref=GO:0005975,GO:0016810;gene=yadE;Parent=GCA000010485_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000277940.1,SO:0001217,UniParc:UPI0001C22925,UniRef:UniRef100_A0A3K3N7M8,UniRef:UniRef50_P31666,UniRef:UniRef90_P31666
contig_1	Pyrodigal	gene	159329	159709	.	-	.	ID=GCA000010485_00148_gene;locus_tag=GCA000010485_00148;gene=panD
contig_1	Pyrodigal	CDS	159329	159709	.	-	0	ID=GCA000010485_00148;Name=aspartate 1-decarboxylase;locus_tag=GCA000010485_00148;product=aspartate 1-decarboxylase;Dbxref=GO:0004068,GO:0005829,GO:0006523,GO:0015940;gene=panD;Parent=GCA000010485_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0853,COG:H,KEGG:K01579,RefSeq:WP_000621515.1,SO:0001217,UniParc:UPI00001312BB,UniRef:UniRef100_P0A790,UniRef:UniRef50_P0A790,UniRef:UniRef90_P0A790;ec_number=4.1.1.11
contig_1	Pyrodigal	gene	159983	160915	.	+	.	ID=GCA000010485_00149_gene;locus_tag=GCA000010485_00149;gene=rpnC
contig_1	Pyrodigal	CDS	159983	160915	.	+	0	ID=GCA000010485_00149;Name=Recombination-promoting nuclease RpnC;locus_tag=GCA000010485_00149;product=Recombination-promoting nuclease RpnC;Dbxref=GO:0006310,GO:1990238;gene=rpnC;Parent=GCA000010485_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000339917.1,SO:0001217,UniParc:UPI0001C22926,UniRef:UniRef100_A0A403CTG4,UniRef:UniRef50_P31665,UniRef:UniRef90_P31665;ec_number=3.1.21.-
contig_1	Pyrodigal	gene	160984	161187	.	+	.	ID=GCA000010485_00150_gene;locus_tag=GCA000010485_00150
contig_1	Pyrodigal	CDS	160984	161187	.	+	0	ID=GCA000010485_00150;Name=Transposase;locus_tag=GCA000010485_00150;product=Transposase;Parent=GCA000010485_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000404124.1,SO:0001217,UniParc:UPI0002A1A1E8,UniRef:UniRef100_A0A7I0KTW1,UniRef:UniRef50_A0A403CTU4,UniRef:UniRef90_A0A3K2YF21
contig_1	Pyrodigal	gene	161269	162120	.	-	.	ID=GCA000010485_00151_gene;locus_tag=GCA000010485_00151;gene=panC
contig_1	Pyrodigal	CDS	161269	162120	.	-	0	ID=GCA000010485_00151;Name=pantoate--beta-alanine ligase;locus_tag=GCA000010485_00151;product=pantoate--beta-alanine ligase;Dbxref=GO:0004592,GO:0005524,GO:0005829,GO:0015940;gene=panC;Parent=GCA000010485_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0414,COG:H,KEGG:K01918,RefSeq:WP_000905361.1,SO:0001217,UniParc:UPI0001C22967,UniRef:UniRef100_A0A061KSC8,UniRef:UniRef50_P31663,UniRef:UniRef90_P31663;ec_number=6.3.2.1
contig_1	Pyrodigal	gene	162132	162926	.	-	.	ID=GCA000010485_00152_gene;locus_tag=GCA000010485_00152;gene=panB
contig_1	Pyrodigal	CDS	162132	162926	.	-	0	ID=GCA000010485_00152;Name=3-methyl-2-oxobutanoate hydroxymethyltransferase;locus_tag=GCA000010485_00152;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;Dbxref=GO:0000287,GO:0003864,GO:0005737,GO:0015940;gene=panB;Parent=GCA000010485_00152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0413,COG:H,KEGG:K00606,RefSeq:WP_000805472.1,SO:0001217,UniParc:UPI0001C22968,UniRef:UniRef100_A0A061YBY2,UniRef:UniRef50_P31057,UniRef:UniRef90_P31057;ec_number=2.1.2.11
contig_1	Pyrodigal	gene	163039	164292	.	-	.	ID=GCA000010485_00153_gene;locus_tag=GCA000010485_00153
contig_1	Pyrodigal	CDS	163039	164292	.	-	0	ID=GCA000010485_00153;Name=fimbrial-like adhesin;locus_tag=GCA000010485_00153;product=fimbrial-like adhesin;Parent=GCA000010485_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846607.1,SO:0001217,UniParc:UPI0001C22969,UniRef:UniRef100_A0A7I0KTW5,UniRef:UniRef50_A0A376L0S4,UniRef:UniRef90_A0A5R8UE04
contig_1	Pyrodigal	gene	164344	164940	.	-	.	ID=GCA000010485_00154_gene;locus_tag=GCA000010485_00154
contig_1	Pyrodigal	CDS	164344	164940	.	-	0	ID=GCA000010485_00154;Name=fimbrial-like protein;locus_tag=GCA000010485_00154;product=fimbrial-like protein;Parent=GCA000010485_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000553753.1,SO:0001217,UniParc:UPI0001C2296A,UniRef:UniRef100_A0A7I0KTU9,UniRef:UniRef50_P37016,UniRef:UniRef90_J7QCA6
contig_1	Pyrodigal	gene	164967	165569	.	-	.	ID=GCA000010485_00155_gene;locus_tag=GCA000010485_00155;gene=yadL
contig_1	Pyrodigal	CDS	164967	165569	.	-	0	ID=GCA000010485_00155;Name=fimbrial-like protein YadL;locus_tag=GCA000010485_00155;product=fimbrial-like protein YadL;Dbxref=GO:0009289,GO:0043709;gene=yadL;Parent=GCA000010485_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000143210.1,SO:0001217,UniParc:UPI0001C2296B,UniRef:UniRef100_A0A061YEA8,UniRef:UniRef50_P37017,UniRef:UniRef90_P37017
contig_1	Pyrodigal	gene	165584	166156	.	-	.	ID=GCA000010485_00156_gene;locus_tag=GCA000010485_00156;gene=yadM
contig_1	Pyrodigal	CDS	165584	166156	.	-	0	ID=GCA000010485_00156;Name=putative fimbrial-like protein YadM;locus_tag=GCA000010485_00156;product=putative fimbrial-like protein YadM;Dbxref=GO:0007155,GO:0009289,GO:0043709;gene=yadM;Parent=GCA000010485_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000598298.1,SO:0001217,UniParc:UPI0001E8B5AC,UniRef:UniRef100_A0A061KSC4,UniRef:UniRef50_P37018,UniRef:UniRef90_P37018
contig_1	Pyrodigal	gene	166173	168773	.	-	.	ID=GCA000010485_00157_gene;locus_tag=GCA000010485_00157;gene=htrE
contig_1	Pyrodigal	CDS	166173	168773	.	-	0	ID=GCA000010485_00157;Name=Yad fimbria usher protein HtrE;locus_tag=GCA000010485_00157;product=Yad fimbria usher protein HtrE;Dbxref=GO:0005515,GO:0007155,GO:0009279,GO:0009297,GO:0015473,GO:0016020;gene=htrE;Parent=GCA000010485_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000151605,RefSeq:WP_000153157.1,SO:0001217,UniParc:UPI0001C2296D,UniRef:UniRef100_A0A7I0KU17,UniRef:UniRef50_P33129,UniRef:UniRef90_P33129
contig_1	Pyrodigal	gene	168808	169548	.	-	.	ID=GCA000010485_00158_gene;locus_tag=GCA000010485_00158;gene=yadV
contig_1	Pyrodigal	CDS	168808	169548	.	-	0	ID=GCA000010485_00158;Name=fimbrial chaperone;locus_tag=GCA000010485_00158;product=fimbrial chaperone;Dbxref=GO:0007155,GO:0030288,GO:0061077,GO:0071555;gene=yadV;Parent=GCA000010485_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15540,RefSeq:WP_000465941.1,SO:0001217,UniParc:UPI0001C2296E,UniRef:UniRef100_A0A061Y802,UniRef:UniRef50_P33128,UniRef:UniRef90_P33128
contig_1	Pyrodigal	gene	169645	170229	.	-	.	ID=GCA000010485_00159_gene;locus_tag=GCA000010485_00159
contig_1	Pyrodigal	CDS	169645	170229	.	-	0	ID=GCA000010485_00159;Name=Fimbrial protein;locus_tag=GCA000010485_00159;product=Fimbrial protein;Parent=GCA000010485_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038431.1,SO:0001217,UniParc:UPI0001C2296F,UniRef:UniRef100_A0A066SWT0,UniRef:UniRef50_P37050,UniRef:UniRef90_A0A0D8VRA0
contig_1	Pyrodigal	gene	170572	171051	.	-	.	ID=GCA000010485_00160_gene;locus_tag=GCA000010485_00160;gene=folK
contig_1	Pyrodigal	CDS	170572	171051	.	-	0	ID=GCA000010485_00160;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA000010485_00160;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;gene=folK;Parent=GCA000010485_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0801,COG:H,RefSeq:WP_000215152.1,SO:0001217,UniParc:UPI0001C22970,UniRef:UniRef100_A0A061Y587,UniRef:UniRef50_P26281,UniRef:UniRef90_Q32JW5;ec_number=2.7.6.3
contig_1	Pyrodigal	gene	171048	172412	.	-	.	ID=GCA000010485_00161_gene;locus_tag=GCA000010485_00161;gene=pcnB
contig_1	Pyrodigal	CDS	171048	172412	.	-	0	ID=GCA000010485_00161;Name=polynucleotide adenylyltransferase PcnB;locus_tag=GCA000010485_00161;product=polynucleotide adenylyltransferase PcnB;Dbxref=GO:0003723,GO:1990817;gene=pcnB;Parent=GCA000010485_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00970,RefSeq:WP_001295781.1,SO:0001217,UniParc:UPI000018F6BC,UniRef:UniRef100_A0A658YVJ2,UniRef:UniRef50_V5ZB68,UniRef:UniRef90_A0A658YVJ2;ec_number=2.7.7.19
contig_1	Pyrodigal	gene	172505	173431	.	-	.	ID=GCA000010485_00162_gene;locus_tag=GCA000010485_00162;gene=gluQRS
contig_1	Pyrodigal	CDS	172505	173431	.	-	0	ID=GCA000010485_00162;Name=tRNA glutamyl-Q(34) synthetase GluQRS;locus_tag=GCA000010485_00162;product=tRNA glutamyl-Q(34) synthetase GluQRS;Dbxref=GO:0000166,GO:0004812,GO:0004818,GO:0005524,GO:0005829,GO:0006400,GO:0006424,GO:0008270,GO:0043039;gene=gluQRS;Parent=GCA000010485_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,SO:0001217,UniParc:UPI0001C22971,UniRef:UniRef100_A0A7I0KTV4,UniRef:UniRef50_P27305,UniRef:UniRef90_P27305;ec_number=6.1.1.-
contig_1	Pyrodigal	gene	173468	173923	.	-	.	ID=GCA000010485_00163_gene;locus_tag=GCA000010485_00163;gene=dksA
contig_1	Pyrodigal	CDS	173468	173923	.	-	0	ID=GCA000010485_00163;Name=RNA polymerase-binding protein DksA;locus_tag=GCA000010485_00163;product=RNA polymerase-binding protein DksA;Dbxref=GO:0005737,GO:0008270,GO:0010468;gene=dksA;Parent=GCA000010485_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1734,COG:K,RefSeq:WP_001155227.1,SO:0001217,UniParc:UPI0000000B51,UniRef:UniRef100_P0ABS1,UniRef:UniRef50_P0ABS1,UniRef:UniRef90_P0ABS1
contig_1	Pyrodigal	gene	174101	174805	.	-	.	ID=GCA000010485_00164_gene;locus_tag=GCA000010485_00164;gene=sfsA
contig_1	Pyrodigal	CDS	174101	174805	.	-	0	ID=GCA000010485_00164;Name=DNA/RNA nuclease SfsA;locus_tag=GCA000010485_00164;product=DNA/RNA nuclease SfsA;Dbxref=GO:0003677;gene=sfsA;Parent=GCA000010485_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1489,COG:GT,KEGG:K06206,RefSeq:WP_000396050.1,SO:0001217,UniParc:UPI000188894F,UniRef:UniRef100_B7N815,UniRef:UniRef50_P0A823,UniRef:UniRef90_P0A823
contig_1	Pyrodigal	gene	174820	175350	.	-	.	ID=GCA000010485_00165_gene;locus_tag=GCA000010485_00165;gene=thpR
contig_1	Pyrodigal	CDS	174820	175350	.	-	0	ID=GCA000010485_00165;Name=RNA 2'%2C3'-cyclic phosphodiesterase;locus_tag=GCA000010485_00165;product=RNA 2'%2C3'-cyclic phosphodiesterase;Dbxref=GO:0004113,GO:0008664;gene=thpR;Parent=GCA000010485_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1514,COG:J,RefSeq:WP_001294702.1,SO:0001217,UniParc:UPI000187B9EC,UniRef:UniRef100_E2QF77,UniRef:UniRef50_A0A0E1NI08,UniRef:UniRef90_W8SS19;ec_number=3.1.4.58
contig_1	Pyrodigal	gene	175424	177853	.	+	.	ID=GCA000010485_00166_gene;locus_tag=GCA000010485_00166;gene=hrpB
contig_1	Pyrodigal	CDS	175424	177853	.	+	0	ID=GCA000010485_00166;Name=ATP-dependent helicase HrpB;locus_tag=GCA000010485_00166;product=ATP-dependent helicase HrpB;Dbxref=GO:0003689,GO:0003724,GO:0003727,GO:0004386,GO:0005524,GO:0016887,GO:0017111,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=hrpB;Parent=GCA000010485_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545814.1,SO:0001217,UniParc:UPI0002A1C0F7,UniRef:UniRef100_A0A7I0L430,UniRef:UniRef50_P37024,UniRef:UniRef90_P37024;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	177947	180472	.	+	.	ID=GCA000010485_00167_gene;locus_tag=GCA000010485_00167;gene=mrcB
contig_1	Pyrodigal	CDS	177947	180472	.	+	0	ID=GCA000010485_00167;Name=bifunctional glycosyl transferase/transpeptidase;locus_tag=GCA000010485_00167;product=bifunctional glycosyl transferase/transpeptidase;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0009274,GO:0016020,GO:0030288,GO:0046677,GO:0051518,GO:0071433;gene=mrcB;Parent=GCA000010485_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K05365,RefSeq:WP_000918174.1,SO:0001217,UniParc:UPI0001C22973,UniRef:UniRef100_A0A3K2REC3,UniRef:UniRef50_P02919,UniRef:UniRef90_P02919;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	180813	181379	.	+	.	ID=GCA000010485_00168_gene;locus_tag=GCA000010485_00168
contig_1	Pyrodigal	CDS	180813	181379	.	+	0	ID=GCA000010485_00168;Name=Fimbrial-type adhesion domain-containing protein;locus_tag=GCA000010485_00168;product=Fimbrial-type adhesion domain-containing protein;Parent=GCA000010485_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001035606.1,SO:0001217,UniParc:UPI0001C22974,UniRef:UniRef100_A0A066SXI5,UniRef:UniRef50_V3PVX0,UniRef:UniRef90_A0AA36KUD0
contig_1	Pyrodigal	gene	181425	182141	.	+	.	ID=GCA000010485_00169_gene;locus_tag=GCA000010485_00169
contig_1	Pyrodigal	CDS	181425	182141	.	+	0	ID=GCA000010485_00169;Name=Periplasmic chaperone;locus_tag=GCA000010485_00169;product=Periplasmic chaperone;Parent=GCA000010485_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110509.1,SO:0001217,UniParc:UPI0002A1BDBA,UniRef:UniRef100_A0A7I0KVC9,UniRef:UniRef50_V3PXW9,UniRef:UniRef90_F4ST29
contig_1	Pyrodigal	gene	182208	184685	.	+	.	ID=GCA000010485_00170_gene;locus_tag=GCA000010485_00170
contig_1	Pyrodigal	CDS	182208	184685	.	+	0	ID=GCA000010485_00170;Name=Putative outer membrane protein;locus_tag=GCA000010485_00170;product=Putative outer membrane protein;Parent=GCA000010485_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07347,RefSeq:WP_000926360.1,SO:0001217,UniParc:UPI0001C22976,UniRef:UniRef100_A0A061KT31,UniRef:UniRef50_V3PTU6,UniRef:UniRef90_A0A376Q019
contig_1	Pyrodigal	gene	184707	185717	.	+	.	ID=GCA000010485_00171_gene;locus_tag=GCA000010485_00171
contig_1	Pyrodigal	CDS	184707	185717	.	+	0	ID=GCA000010485_00171;Name=Fimbrial usher protein;locus_tag=GCA000010485_00171;product=Fimbrial usher protein;Parent=GCA000010485_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295784.1,SO:0001217,UniParc:UPI0001C22977,UniRef:UniRef100_A0A066SNU5,UniRef:UniRef50_A0A2A7M4X4,UniRef:UniRef90_A0A2A7M4X4
contig_1	Pyrodigal	gene	185937	188186	.	+	.	ID=GCA000010485_00172_gene;locus_tag=GCA000010485_00172;gene=fhuA
contig_1	Pyrodigal	CDS	185937	188186	.	+	0	ID=GCA000010485_00172;Name=ferrichrome porin FhuA;locus_tag=GCA000010485_00172;product=ferrichrome porin FhuA;Dbxref=GO:0009279,GO:0015344,GO:0015891,GO:0038023;gene=fhuA;Parent=GCA000010485_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000124398.1,SO:0001217,UniParc:UPI0001C22978,UniRef:UniRef100_A0A061KWY3,UniRef:UniRef50_B2VE21,UniRef:UniRef90_A0A0D7LAW6
contig_1	Pyrodigal	gene	188238	189035	.	+	.	ID=GCA000010485_00173_gene;locus_tag=GCA000010485_00173;gene=fhuC
contig_1	Pyrodigal	CDS	188238	189035	.	+	0	ID=GCA000010485_00173;Name=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;locus_tag=GCA000010485_00173;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;Dbxref=GO:0005524,GO:0005886,GO:0015091,GO:0015344,GO:0015625,GO:0015687,GO:0016887,GO:0043190,GO:0055052,GO:0098711;gene=fhuC;Parent=GCA000010485_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_001295786.1,SO:0001217,UniParc:UPI0001C22979,UniRef:UniRef100_A0A061YIG6,UniRef:UniRef50_P07821,UniRef:UniRef90_P07821;ec_number=7.2.2.16
contig_1	Pyrodigal	gene	189035	189925	.	+	.	ID=GCA000010485_00174_gene;locus_tag=GCA000010485_00174;gene=fhuD
contig_1	Pyrodigal	CDS	189035	189925	.	+	0	ID=GCA000010485_00174;Name=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;locus_tag=GCA000010485_00174;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;Dbxref=GO:0015687,GO:0030288,GO:0055052,GO:0098711;gene=fhuD;Parent=GCA000010485_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_001295787.1,SO:0001217,UniParc:UPI0000E44E74,UniRef:UniRef100_E2QF81,UniRef:UniRef50_P07822,UniRef:UniRef90_P07822;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	189922	191904	.	+	.	ID=GCA000010485_00175_gene;locus_tag=GCA000010485_00175;gene=fhuB
contig_1	Pyrodigal	CDS	189922	191904	.	+	0	ID=GCA000010485_00175;Name=Fe(3+)-hydroxamate ABC transporter permease FhuB;locus_tag=GCA000010485_00175;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;Dbxref=GO:0005886,GO:0015344,GO:0015687,GO:0022857,GO:0033214,GO:0043190,GO:0055052,GO:0098711;gene=fhuB;Parent=GCA000010485_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,KEGG:K23228,RefSeq:WP_000044116.1,SO:0001217,UniParc:UPI0001C2297A,UniRef:UniRef100_A0A066SNU0,UniRef:UniRef50_P06972,UniRef:UniRef90_P06972;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	191939	193219	.	-	.	ID=GCA000010485_00176_gene;locus_tag=GCA000010485_00176;gene=hemL
contig_1	Pyrodigal	CDS	191939	193219	.	-	0	ID=GCA000010485_00176;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000010485_00176;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL;Parent=GCA000010485_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_000045296.1,SO:0001217,UniParc:UPI0001C2297B,UniRef:UniRef100_A0A061KSA6,UniRef:UniRef50_P23893,UniRef:UniRef90_P23893;ec_number=5.4.3.8
contig_1	Bakta	gene	193385	193432	.	+	.	ID=GCA000010485_00177_gene;locus_tag=GCA000010485_00177;inference=ab initio prediction:Bakta;gene=yadX
contig_1	Bakta	CDS	193385	193432	.	+	0	ID=GCA000010485_00177;Name=Protein YadX;locus_tag=GCA000010485_00177;product=Protein YadX;gene=yadX;Parent=GCA000010485_00177_gene;Note=RefSeq:WP_211180485.1,SO:0001217,UniParc:UPI00107E63B4,UniRef:UniRef100_P0DSE3,UniRef:UniRef90_P0DSE3
contig_1	Pyrodigal	gene	193444	194865	.	+	.	ID=GCA000010485_00178_gene;locus_tag=GCA000010485_00178;gene=clcA
contig_1	Pyrodigal	CDS	193444	194865	.	+	0	ID=GCA000010485_00178;Name=H(+)/Cl(-) exchange transporter ClcA;locus_tag=GCA000010485_00178;product=H(+)/Cl(-) exchange transporter ClcA;Dbxref=GO:0005247,GO:0005886,GO:0006821,GO:0015297,GO:0055085;gene=clcA;Parent=GCA000010485_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0038,COG:P,RefSeq:WP_000845408.1,SO:0001217,UniParc:UPI000012A15C,UniRef:UniRef100_P58244,UniRef:UniRef50_P37019,UniRef:UniRef90_P37019
contig_1	Bakta	gene	194889	194954	.	+	.	ID=GCA000010485_00179_gene;locus_tag=GCA000010485_00179;inference=ab initio prediction:Bakta;gene=yadW
contig_1	Bakta	CDS	194889	194954	.	+	0	ID=GCA000010485_00179;Name=Protein YadW;locus_tag=GCA000010485_00179;product=Protein YadW;gene=yadW;Parent=GCA000010485_00179_gene;Note=RefSeq:WP_120795373.1,SO:0001217,UniParc:UPI00045B4E45,UniRef:UniRef100_P0DPM7,UniRef:UniRef50_P0DPM7,UniRef:UniRef90_P0DPM7
contig_1	Pyrodigal	gene	194947	195291	.	+	.	ID=GCA000010485_00180_gene;locus_tag=GCA000010485_00180;gene=erpA
contig_1	Pyrodigal	CDS	194947	195291	.	+	0	ID=GCA000010485_00180;Name=iron-sulfur cluster insertion protein ErpA;locus_tag=GCA000010485_00180;product=iron-sulfur cluster insertion protein ErpA;Dbxref=GO:0005506,GO:0005829,GO:0016226,GO:0051536,GO:0051537,GO:0051539,GO:0106035;gene=erpA;Parent=GCA000010485_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_001295564.1,SO:0001217,UniParc:UPI000013A046,UniRef:UniRef100_P0ACC3,UniRef:UniRef50_P0ACC3,UniRef:UniRef90_P0ACC3
contig_1	Pyrodigal	gene	195338	195961	.	-	.	ID=GCA000010485_00181_gene;locus_tag=GCA000010485_00181;gene=yadS
contig_1	Pyrodigal	CDS	195338	195961	.	-	0	ID=GCA000010485_00181;Name=UPF0126 inner membrane protein YadS;locus_tag=GCA000010485_00181;product=UPF0126 inner membrane protein YadS;Dbxref=GO:0005886;gene=yadS;Parent=GCA000010485_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2860,COG:P,RefSeq:WP_000964221.1,SO:0001217,UniParc:UPI000013A04A,UniRef:UniRef100_P0AFP0,UniRef:UniRef50_P0AFP0,UniRef:UniRef90_P0AFP0
contig_1	Pyrodigal	gene	195999	196799	.	-	.	ID=GCA000010485_00182_gene;locus_tag=GCA000010485_00182;gene=btuF
contig_1	Pyrodigal	CDS	195999	196799	.	-	0	ID=GCA000010485_00182;Name=vitamin B12 ABC transporter substrate-binding protein BtuF;locus_tag=GCA000010485_00182;product=vitamin B12 ABC transporter substrate-binding protein BtuF;Dbxref=GO:0005524,GO:0015889,GO:0031419,GO:0042597;gene=btuF;Parent=GCA000010485_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_001129927.1,SO:0001217,UniParc:UPI0000126B26,UniRef:UniRef100_P37028,UniRef:UniRef50_P37028,UniRef:UniRef90_P37028;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	196792	197490	.	-	.	ID=GCA000010485_00183_gene;locus_tag=GCA000010485_00183;gene=mtnN
contig_1	Pyrodigal	CDS	196792	197490	.	-	0	ID=GCA000010485_00183;Name=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;locus_tag=GCA000010485_00183;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009164,GO:0019284,GO:0019509,GO:0046124;gene=mtnN;Parent=GCA000010485_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01243,RefSeq:WP_000689844.1,SO:0001217,UniParc:UPI0000036BC8,UniRef:UniRef100_P0AF12,UniRef:UniRef50_P0AF12,UniRef:UniRef90_P0AF12;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	197574	199091	.	+	.	ID=GCA000010485_00184_gene;locus_tag=GCA000010485_00184;gene=dgt
contig_1	Pyrodigal	CDS	197574	199091	.	+	0	ID=GCA000010485_00184;Name=dGTPase;locus_tag=GCA000010485_00184;product=dGTPase;Dbxref=GO:0000287,GO:0006203,GO:0008832;gene=dgt;Parent=GCA000010485_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01129,RefSeq:WP_000057107.1,SO:0001217,UniParc:UPI0001C2297C,UniRef:UniRef100_A0A0C5E6N8,UniRef:UniRef50_P15723,UniRef:UniRef90_P15723;ec_number=3.1.5.1
contig_1	Infernal	regulatory_region	199181	199226	2.1e-13	+	.	ID=EFPPCJGBKI_310;Name=HtrA 5' UTR thermometer;product=HtrA 5' UTR thermometer;Dbxref=RFAM:RF02700;inference=profile:Rfam:RF02700;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	199221	200645	.	+	.	ID=GCA000010485_00185_gene;locus_tag=GCA000010485_00185;gene=degP
contig_1	Pyrodigal	CDS	199221	200645	.	+	0	ID=GCA000010485_00185;Name=serine endoprotease DegP;locus_tag=GCA000010485_00185;product=serine endoprotease DegP;Dbxref=GO:0004252,GO:0005886,GO:0006457,GO:0006508,GO:0006515,GO:0006979,GO:0008233,GO:0008236,GO:0009266,GO:0009408,GO:0030288,GO:0042597,GO:0042802,GO:0061077;gene=degP;Parent=GCA000010485_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_000753956.1,SO:0001217,UniParc:UPI0001C229AE,UniRef:UniRef100_UPI0001C229AE,UniRef:UniRef50_P0C0V0,UniRef:UniRef90_P0C0V0;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	200800	201957	.	+	.	ID=GCA000010485_00186_gene;locus_tag=GCA000010485_00186;gene=cdaR
contig_1	Pyrodigal	CDS	200800	201957	.	+	0	ID=GCA000010485_00186;Name=DNA-binding transcriptional regulator CdaR;locus_tag=GCA000010485_00186;product=DNA-binding transcriptional regulator CdaR;Dbxref=GO:0003700,GO:0045893;gene=cdaR;Parent=GCA000010485_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000929443,COG:COG3835,COG:KT,KEGG:K02647,RefSeq:WP_000929439.1,SO:0001217,UniParc:UPI00005EEC14,UniRef:UniRef100_E2QF91,UniRef:UniRef50_P37047,UniRef:UniRef90_P37047
contig_1	Pyrodigal	gene	202011	202397	.	-	.	ID=GCA000010485_00187_gene;locus_tag=GCA000010485_00187;gene=yaeH
contig_1	Pyrodigal	CDS	202011	202397	.	-	0	ID=GCA000010485_00187;Name=DUF3461 domain-containing protein;locus_tag=GCA000010485_00187;product=DUF3461 domain-containing protein;gene=yaeH;Parent=GCA000010485_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000272188.1,SO:0001217,UniParc:UPI000013A061,UniRef:UniRef100_P62768,UniRef:UniRef50_P62768,UniRef:UniRef90_P62768
contig_1	Pyrodigal	gene	202707	203531	.	-	.	ID=GCA000010485_00188_gene;locus_tag=GCA000010485_00188;gene=dapD
contig_1	Pyrodigal	CDS	202707	203531	.	-	0	ID=GCA000010485_00188;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;locus_tag=GCA000010485_00188;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;Dbxref=GO:0005737,GO:0008666,GO:0009089,GO:0016779,GO:0019877;gene=dapD;Parent=GCA000010485_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2171,COG:E,RefSeq:WP_001186656.1,SO:0001217,UniParc:UPI00005EF9AB,UniRef:UniRef100_B7UIL1,UniRef:UniRef50_P0A9D8,UniRef:UniRef90_P0A9D8;ec_number=2.3.1.117
contig_1	Pyrodigal	gene	203562	206234	.	-	.	ID=GCA000010485_00189_gene;locus_tag=GCA000010485_00189;gene=glnD
contig_1	Pyrodigal	CDS	203562	206234	.	-	0	ID=GCA000010485_00189;Name=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;locus_tag=GCA000010485_00189;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;Dbxref=GO:0006808,GO:0008081,GO:0008152,GO:0008773,GO:0016779;gene=glnD;Parent=GCA000010485_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2844,COG:OT,RefSeq:WP_001094534.1,SO:0001217,UniParc:UPI00005EF9AA,UniRef:UniRef100_Q0TLG6,UniRef:UniRef50_P27249,UniRef:UniRef90_P27249;ec_number=2.7.7.59
contig_1	Pyrodigal	gene	206296	207090	.	-	.	ID=GCA000010485_00190_gene;locus_tag=GCA000010485_00190;gene=map
contig_1	Pyrodigal	CDS	206296	207090	.	-	0	ID=GCA000010485_00190;Name=type I methionyl aminopeptidase;locus_tag=GCA000010485_00190;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0005829,GO:0006508,GO:0046872,GO:0070006;gene=map;Parent=GCA000010485_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,KEGG:K01265,RefSeq:WP_001018194.1,SO:0001217,UniParc:UPI00000480C3,UniRef:UniRef100_P0AE18,UniRef:UniRef50_P0AE18,UniRef:UniRef90_P0AE18;ec_number=3.4.11.18
contig_1	Infernal	gene	207344	207430	.	+	.	ID=GCA000010485_00191_gene;locus_tag=GCA000010485_00191;gene=t44
contig_1	Infernal	ncRNA	207344	207430	2.6e-13	+	.	ID=GCA000010485_00191;Name=t44 RNA;locus_tag=GCA000010485_00191;product=t44 RNA;Dbxref=RFAM:RF00127;Parent=GCA000010485_00191_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00127
contig_1	Pyrodigal	gene	207458	208183	.	+	.	ID=GCA000010485_00192_gene;locus_tag=GCA000010485_00192;gene=rpsB
contig_1	Pyrodigal	CDS	207458	208183	.	+	0	ID=GCA000010485_00192;Name=30S ribosomal protein S2;locus_tag=GCA000010485_00192;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000010485_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_000246882.1,SO:0001217,UniParc:UPI00001653A2,UniRef:UniRef100_P0A7V0,UniRef:UniRef50_P0A7V0,UniRef:UniRef90_P0A7V0
contig_1	Pyrodigal	gene	208318	209169	.	+	.	ID=GCA000010485_00193_gene;locus_tag=GCA000010485_00193;gene=tuf
contig_1	Pyrodigal	CDS	208318	209169	.	+	0	ID=GCA000010485_00193;Name=elongation factor Tu;locus_tag=GCA000010485_00193;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0006414,GO:0046677,GO:0097216;gene=tuf;Parent=GCA000010485_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_000818114.1,SO:0001217,UniParc:UPI0000163968,UniRef:UniRef100_P0CE48,UniRef:UniRef50_P0CE48,UniRef:UniRef90_P0CE48
contig_1	Pyrodigal	gene	209316	210041	.	+	.	ID=GCA000010485_00194_gene;locus_tag=GCA000010485_00194;gene=pyrH
contig_1	Pyrodigal	CDS	209316	210041	.	+	0	ID=GCA000010485_00194;Name=UMP kinase;locus_tag=GCA000010485_00194;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0005829,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000010485_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,KEGG:K09903,RefSeq:WP_000224573.1,SO:0001217,UniParc:UPI0000163969,UniRef:UniRef100_P0A7E9,UniRef:UniRef50_P0A7E9,UniRef:UniRef90_P0A7E9;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	210191	210748	.	+	.	ID=GCA000010485_00195_gene;locus_tag=GCA000010485_00195;gene=frr
contig_1	Pyrodigal	CDS	210191	210748	.	+	0	ID=GCA000010485_00195;Name=ribosome recycling factor;locus_tag=GCA000010485_00195;product=ribosome recycling factor;Dbxref=GO:0002184,GO:0005829,GO:0006412,GO:0008135,GO:0043023;gene=frr;Parent=GCA000010485_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_000622418.1,SO:0001217,UniParc:UPI000011134B,UniRef:UniRef100_P0A805,UniRef:UniRef50_P0A805,UniRef:UniRef90_P0A805
contig_1	Pyrodigal	gene	210840	212036	.	+	.	ID=GCA000010485_00196_gene;locus_tag=GCA000010485_00196;gene=ispC
contig_1	Pyrodigal	CDS	210840	212036	.	+	0	ID=GCA000010485_00196;Name=1-deoxy-D-xylulose-5-phosphate reductoisomerase;locus_tag=GCA000010485_00196;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;Dbxref=GO:0005515,GO:0008299,GO:0030145,GO:0030604,GO:0046872,GO:0051484,GO:0070402;gene=ispC;Parent=GCA000010485_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0743,COG:I,KEGG:K00099,RefSeq:WP_000811939.1,SO:0001217,UniParc:UPI0001C229AF,UniRef:UniRef100_A0A061KXH4,UniRef:UniRef50_P45568,UniRef:UniRef90_P45568;ec_number=1.1.1.267
contig_1	Pyrodigal	gene	212225	212983	.	+	.	ID=GCA000010485_00197_gene;locus_tag=GCA000010485_00197;gene=ispU
contig_1	Pyrodigal	CDS	212225	212983	.	+	0	ID=GCA000010485_00197;Name=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;locus_tag=GCA000010485_00197;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;Dbxref=GO:0000287,GO:0002094,GO:0005737,GO:0005829,GO:0008360,GO:0008834,GO:0009252,GO:0016094,GO:0036094,GO:0042803,GO:0043164,GO:0051301,GO:0071555;gene=ispU;Parent=GCA000010485_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_001295562.1,SO:0001217,UniParc:UPI000016F596,UniRef:UniRef100_A0AAX2KFS7,UniRef:UniRef50_P60472,UniRef:UniRef90_P60472;ec_number=2.5.1.31
contig_1	Pyrodigal	gene	212983	213135	.	+	.	ID=GCA000010485_00198_gene;locus_tag=GCA000010485_00198
contig_1	Pyrodigal	CDS	212983	213135	.	+	0	ID=GCA000010485_00198;Name=CDP-diglyceride synthase;locus_tag=GCA000010485_00198;product=CDP-diglyceride synthase;Parent=GCA000010485_00198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E9648C,UniRef:UniRef100_A0A377KE45,UniRef:UniRef50_A0A376VZI6,UniRef:UniRef90_A0A377KE45
contig_1	Pyrodigal	gene	213104	213853	.	+	.	ID=GCA000010485_00199_gene;locus_tag=GCA000010485_00199;gene=cdsA
contig_1	Pyrodigal	CDS	213104	213853	.	+	0	ID=GCA000010485_00199;Name=phosphatidate cytidylyltransferase;locus_tag=GCA000010485_00199;product=phosphatidate cytidylyltransferase;Dbxref=GO:0016772;gene=cdsA;Parent=GCA000010485_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,SO:0001217,UniParc:UPI000218584C,UniRef:UniRef100_E2QFA2,UniRef:UniRef50_P0ABG1,UniRef:UniRef90_A0A379U368;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	213865	215217	.	+	.	ID=GCA000010485_00200_gene;locus_tag=GCA000010485_00200;gene=rseP
contig_1	Pyrodigal	CDS	213865	215217	.	+	0	ID=GCA000010485_00200;Name=sigma E protease regulator RseP;locus_tag=GCA000010485_00200;product=sigma E protease regulator RseP;Dbxref=GO:0004222,GO:0005515,GO:0005886,GO:0006508,GO:0016020,GO:0036460,GO:0043856,GO:0045893,GO:0046872;gene=rseP;Parent=GCA000010485_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_001295561.1,SO:0001217,UniParc:UPI0000032C9E,UniRef:UniRef100_P0AEH1,UniRef:UniRef50_P0AEH1,UniRef:UniRef90_P0AEH1;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	215247	217679	.	+	.	ID=GCA000010485_00201_gene;locus_tag=GCA000010485_00201;gene=bamA
contig_1	Pyrodigal	CDS	215247	217679	.	+	0	ID=GCA000010485_00201;Name=outer membrane protein assembly factor BamA;locus_tag=GCA000010485_00201;product=outer membrane protein assembly factor BamA;Dbxref=GO:0009279,GO:0043165,GO:0051205,GO:0071709,GO:1990063;gene=bamA;Parent=GCA000010485_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4775,COG:M,KEGG:K07277,RefSeq:WP_001240896.1,SO:0001217,UniParc:UPI0000000A4D,UniRef:UniRef100_P0A940,UniRef:UniRef50_P0A940,UniRef:UniRef90_P0A940
contig_1	Pyrodigal	gene	217801	218286	.	+	.	ID=GCA000010485_00202_gene;locus_tag=GCA000010485_00202;gene=skp
contig_1	Pyrodigal	CDS	217801	218286	.	+	0	ID=GCA000010485_00202;Name=molecular chaperone Skp;locus_tag=GCA000010485_00202;product=molecular chaperone Skp;Dbxref=GO:0005829,GO:0022417,GO:0042597,GO:0050821,GO:0051082,GO:0061077;gene=skp;Parent=GCA000010485_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2825,COG:MO,RefSeq:WP_000758956.1,SO:0001217,UniParc:UPI000012C942,UniRef:UniRef100_P0AEU7,UniRef:UniRef50_P0AEU7,UniRef:UniRef90_P0AEU7
contig_1	Pyrodigal	gene	218290	219315	.	+	.	ID=GCA000010485_00203_gene;locus_tag=GCA000010485_00203;gene=lpxD
contig_1	Pyrodigal	CDS	218290	219315	.	+	0	ID=GCA000010485_00203;Name=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;locus_tag=GCA000010485_00203;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;Dbxref=GO:0009245,GO:0016020,GO:0016410,GO:0103118;gene=lpxD;Parent=GCA000010485_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1044,COG:M,RefSeq:WP_001139282.1,SO:0001217,UniParc:UPI000016396B,UniRef:UniRef100_P65323,UniRef:UniRef50_P21645,UniRef:UniRef90_P21645;ec_number=2.3.1.191
contig_1	Pyrodigal	gene	219420	219875	.	+	.	ID=GCA000010485_00204_gene;locus_tag=GCA000010485_00204;gene=fabZ
contig_1	Pyrodigal	CDS	219420	219875	.	+	0	ID=GCA000010485_00204;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA000010485_00204;product=3-hydroxyacyl-ACP dehydratase FabZ;Dbxref=GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171;gene=fabZ;Parent=GCA000010485_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,RefSeq:WP_000210739.1,SO:0001217,UniParc:UPI000012A4A9,UniRef:UniRef100_P0A6Q6,UniRef:UniRef50_P0A6Q6,UniRef:UniRef90_P0A6Q6;ec_number=4.2.1.59
contig_1	Pyrodigal	gene	219879	220667	.	+	.	ID=GCA000010485_00205_gene;locus_tag=GCA000010485_00205;gene=lpxA
contig_1	Pyrodigal	CDS	219879	220667	.	+	0	ID=GCA000010485_00205;Name=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;locus_tag=GCA000010485_00205;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;Dbxref=GO:0005737,GO:0008610,GO:0008780,GO:0009245,GO:0016020;gene=lpxA;Parent=GCA000010485_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1043,COG:M,RefSeq:WP_000565966.1,SO:0001217,UniParc:UPI0000112535,UniRef:UniRef100_P0A722,UniRef:UniRef50_P0A722,UniRef:UniRef90_P0A722;ec_number=2.3.1.129
contig_1	Pyrodigal	gene	220667	221815	.	+	.	ID=GCA000010485_00206_gene;locus_tag=GCA000010485_00206;gene=lpxB
contig_1	Pyrodigal	CDS	220667	221815	.	+	0	ID=GCA000010485_00206;Name=lipid-A-disaccharide synthase;locus_tag=GCA000010485_00206;product=lipid-A-disaccharide synthase;Dbxref=GO:0005543,GO:0008915,GO:0009245,GO:0016020;gene=lpxB;Parent=GCA000010485_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0763,COG:M,KEGG:K00748,RefSeq:WP_000139678.1,SO:0001217,UniParc:UPI00000DE737,UniRef:UniRef100_B7MBG3,UniRef:UniRef50_P10441,UniRef:UniRef90_P10441;ec_number=2.4.1.182
contig_1	Pyrodigal	gene	221812	222408	.	+	.	ID=GCA000010485_00207_gene;locus_tag=GCA000010485_00207;gene=rnhB
contig_1	Pyrodigal	CDS	221812	222408	.	+	0	ID=GCA000010485_00207;Name=ribonuclease HII;locus_tag=GCA000010485_00207;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000010485_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,RefSeq:WP_000569423.1,SO:0001217,UniParc:UPI00005EF9A5,UniRef:UniRef100_B7UJ84,UniRef:UniRef50_P10442,UniRef:UniRef90_P10442;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	222445	225927	.	+	.	ID=GCA000010485_00208_gene;locus_tag=GCA000010485_00208;gene=dnaE
contig_1	Pyrodigal	CDS	222445	225927	.	+	0	ID=GCA000010485_00208;Name=DNA polymerase III subunit alpha;locus_tag=GCA000010485_00208;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA000010485_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,KEGG:K02337,RefSeq:WP_001294788.1,SO:0001217,UniParc:UPI0001C229B0,UniRef:UniRef100_A0A061YEU4,UniRef:UniRef50_P10443,UniRef:UniRef90_P10443;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	225940	226899	.	+	.	ID=GCA000010485_00209_gene;locus_tag=GCA000010485_00209;gene=accA
contig_1	Pyrodigal	CDS	225940	226899	.	+	0	ID=GCA000010485_00209;Name=acetyl-CoA carboxylase carboxyl transferase subunit alpha;locus_tag=GCA000010485_00209;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0009317,GO:0016743,GO:2001295;gene=accA;Parent=GCA000010485_00209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_000055741.1,SO:0001217,UniParc:UPI000016396D,UniRef:UniRef100_P0ABD5,UniRef:UniRef50_P0ABD5,UniRef:UniRef90_P0ABD5;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	226997	229138	.	+	.	ID=GCA000010485_00210_gene;locus_tag=GCA000010485_00210;gene=ldcC
contig_1	Pyrodigal	CDS	226997	229138	.	+	0	ID=GCA000010485_00210;Name=lysine decarboxylase LdcC;locus_tag=GCA000010485_00210;product=lysine decarboxylase LdcC;Dbxref=GO:0005737,GO:0006554,GO:0008923,GO:0042802;gene=ldcC;Parent=GCA000010485_00210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001020954,KEGG:K01582,RefSeq:WP_001021005.1,SO:0001217,UniParc:UPI0001C229B1,UniRef:UniRef100_A0A066SXE8,UniRef:UniRef50_P0A9H3,UniRef:UniRef90_P52095;ec_number=4.1.1.18
contig_1	Pyrodigal	gene	229195	229584	.	+	.	ID=GCA000010485_00211_gene;locus_tag=GCA000010485_00211;gene=yaeR
contig_1	Pyrodigal	CDS	229195	229584	.	+	0	ID=GCA000010485_00211;Name=VOC family protein;locus_tag=GCA000010485_00211;product=VOC family protein;Dbxref=GO:0046872;gene=yaeR;Parent=GCA000010485_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_000901082.1,SO:0001217,UniParc:UPI00005EF9A2,UniRef:UniRef100_E2QFB4,UniRef:UniRef50_P52096,UniRef:UniRef90_P52096
contig_1	Pyrodigal	gene	229649	230962	.	+	.	ID=GCA000010485_00212_gene;locus_tag=GCA000010485_00212;gene=tilS
contig_1	Pyrodigal	CDS	229649	230962	.	+	0	ID=GCA000010485_00212;Name=tRNA lysidine(34) synthetase TilS;locus_tag=GCA000010485_00212;product=tRNA lysidine(34) synthetase TilS;Dbxref=GO:0000166,GO:0002136,GO:0005524,GO:0005829,GO:0006400,GO:0008033,GO:0016879,GO:0032267,GO:0042802;gene=tilS;Parent=GCA000010485_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04075,RefSeq:WP_000176523.1,SO:0001217,UniParc:UPI0001C229B2,UniRef:UniRef100_A0A066SSM3,UniRef:UniRef50_P52097,UniRef:UniRef90_P52097;ec_number=6.3.4.19
contig_1	Pyrodigal	gene	230996	231256	.	-	.	ID=GCA000010485_00213_gene;locus_tag=GCA000010485_00213;gene=rof
contig_1	Pyrodigal	CDS	230996	231256	.	-	0	ID=GCA000010485_00213;Name=Rho-binding antiterminator;locus_tag=GCA000010485_00213;product=Rho-binding antiterminator;Dbxref=GO:0031554,GO:0031564;gene=rof;Parent=GCA000010485_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4568,COG:K,KEGG:K19000,RefSeq:WP_000062311.1,SO:0001217,UniParc:UPI00000DE73E,UniRef:UniRef100_A0A023KK81,UniRef:UniRef50_P0AFW8,UniRef:UniRef90_P0AFW8
contig_1	Pyrodigal	gene	231243	231443	.	-	.	ID=GCA000010485_00214_gene;locus_tag=GCA000010485_00214;gene=yaeP
contig_1	Pyrodigal	CDS	231243	231443	.	-	0	ID=GCA000010485_00214;Name=YaeP family protein;locus_tag=GCA000010485_00214;product=YaeP family protein;gene=yaeP;Parent=GCA000010485_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000417058.1,SO:0001217,UniParc:UPI000013A065,UniRef:UniRef100_P0A8K5,UniRef:UniRef50_P67551,UniRef:UniRef90_P0A8K5
contig_1	Pyrodigal	gene	231609	232154	.	+	.	ID=GCA000010485_00215_gene;locus_tag=GCA000010485_00215;gene=yaeQ
contig_1	Pyrodigal	CDS	231609	232154	.	+	0	ID=GCA000010485_00215;Name=putative protein YaeQ;locus_tag=GCA000010485_00215;product=putative protein YaeQ;gene=yaeQ;Parent=GCA000010485_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4681,COG:S,RefSeq:WP_001185283.1,SO:0001217,UniParc:UPI00005EF99F,UniRef:UniRef100_E2QFB8,UniRef:UniRef50_P0AA97,UniRef:UniRef90_P0AA97
contig_1	Pyrodigal	gene	232151	232573	.	+	.	ID=GCA000010485_00216_gene;locus_tag=GCA000010485_00216;gene=arfB
contig_1	Pyrodigal	CDS	232151	232573	.	+	0	ID=GCA000010485_00216;Name=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;locus_tag=GCA000010485_00216;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;Dbxref=GO:0003747,GO:0006415;gene=arfB;Parent=GCA000010485_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000635528.1,SO:0001217,UniParc:UPI00000DE741,UniRef:UniRef100_E2QFB9,UniRef:UniRef50_J7R0Q7,UniRef:UniRef90_J7R0Q7;ec_number=3.1.1.29
contig_1	Pyrodigal	gene	232587	233297	.	+	.	ID=GCA000010485_00217_gene;locus_tag=GCA000010485_00217;gene=nlpE
contig_1	Pyrodigal	CDS	232587	233297	.	+	0	ID=GCA000010485_00217;Name=envelope stress response activation lipoprotein NlpE;locus_tag=GCA000010485_00217;product=envelope stress response activation lipoprotein NlpE;Dbxref=GO:0007155,GO:0009279,GO:0010810,GO:0036460,GO:0042802,GO:1990169;gene=nlpE;Parent=GCA000010485_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3015,COG:MV,RefSeq:WP_000239170.1,SO:0001217,UniParc:UPI0001B6267E,UniRef:UniRef100_A0A066SSL8,UniRef:UniRef50_P40710,UniRef:UniRef90_P40710
contig_1	Pyrodigal	gene	233453	234277	.	-	.	ID=GCA000010485_00218_gene;locus_tag=GCA000010485_00218;gene=yaeF
contig_1	Pyrodigal	CDS	233453	234277	.	-	0	ID=GCA000010485_00218;Name=YaeF family permuted papain-like enzyme;locus_tag=GCA000010485_00218;product=YaeF family permuted papain-like enzyme;Dbxref=GO:0005886,GO:0006508,GO:0008234;gene=yaeF;Parent=GCA000010485_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000360458.1,SO:0001217,UniParc:UPI0001C229B3,UniRef:UniRef100_A0A061KUS3,UniRef:UniRef50_P37056,UniRef:UniRef90_P37056;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	234330	236048	.	-	.	ID=GCA000010485_00219_gene;locus_tag=GCA000010485_00219;gene=proS
contig_1	Pyrodigal	CDS	234330	236048	.	-	0	ID=GCA000010485_00219;Name=proline--tRNA ligase;locus_tag=GCA000010485_00219;product=proline--tRNA ligase;Dbxref=GO:0002161,GO:0004827,GO:0005524,GO:0005829,GO:0006433;gene=proS;Parent=GCA000010485_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_001260690.1,SO:0001217,UniParc:UPI0001C229B4,UniRef:UniRef100_A0A061YAX2,UniRef:UniRef50_P16659,UniRef:UniRef90_P16659;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	236159	236866	.	-	.	ID=GCA000010485_00220_gene;locus_tag=GCA000010485_00220;gene=tsaA
contig_1	Pyrodigal	CDS	236159	236866	.	-	0	ID=GCA000010485_00220;Name=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;locus_tag=GCA000010485_00220;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;Dbxref=GO:0005737,GO:0006400,GO:0008757;gene=tsaA;Parent=GCA000010485_00220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22900,RefSeq:WP_000094006.1,SO:0001217,UniParc:UPI0000D5063F,UniRef:UniRef100_A0A066SXE0,UniRef:UniRef50_P28634,UniRef:UniRef90_A0A2A7M5W7;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	236863	237267	.	-	.	ID=GCA000010485_00221_gene;locus_tag=GCA000010485_00221;gene=rcsF
contig_1	Pyrodigal	CDS	236863	237267	.	-	0	ID=GCA000010485_00221;Name=Rcs stress response system protein RcsF;locus_tag=GCA000010485_00221;product=Rcs stress response system protein RcsF;Dbxref=GO:0007165,GO:0009279,GO:0030288,GO:0031241,GO:0035556,GO:0036460,GO:0070299,GO:0106234;gene=rcsF;Parent=GCA000010485_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06080,RefSeq:WP_001202329.1,SO:0001217,UniParc:UPI0000133484,UniRef:UniRef100_P69411,UniRef:UniRef50_P69411,UniRef:UniRef90_P69411
contig_1	Pyrodigal	gene	237385	238200	.	-	.	ID=GCA000010485_00222_gene;locus_tag=GCA000010485_00222;gene=metQ
contig_1	Pyrodigal	CDS	237385	238200	.	-	0	ID=GCA000010485_00222;Name=methionine ABC transporter substrate-binding lipoprotein MetQ;locus_tag=GCA000010485_00222;product=methionine ABC transporter substrate-binding lipoprotein MetQ;Dbxref=GO:0015821,GO:0016020,GO:0030288,GO:0048473,GO:0055052,GO:1903692,GO:1990197;gene=metQ;Parent=GCA000010485_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000874226,COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_000874226.1,SO:0001217,UniParc:UPI000012F006,UniRef:UniRef100_P28635,UniRef:UniRef50_P28635,UniRef:UniRef90_P28635
contig_1	Pyrodigal	gene	238240	238893	.	-	.	ID=GCA000010485_00223_gene;locus_tag=GCA000010485_00223;gene=metI
contig_1	Pyrodigal	CDS	238240	238893	.	-	0	ID=GCA000010485_00223;Name=D-methionine transport system permease protein MetI;locus_tag=GCA000010485_00223;product=D-methionine transport system permease protein MetI;Dbxref=GO:0005886,GO:0048473;gene=metI;Parent=GCA000010485_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_001294595.1,SO:0001217,UniParc:UPI00000DE745,UniRef:UniRef100_A0A061KUR8,UniRef:UniRef50_P31547,UniRef:UniRef90_P31547
contig_1	Pyrodigal	gene	238886	239917	.	-	.	ID=GCA000010485_00224_gene;locus_tag=GCA000010485_00224;gene=metN
contig_1	Pyrodigal	CDS	238886	239917	.	-	0	ID=GCA000010485_00224;Name=methionine ABC transporter ATP-binding protein MetN;locus_tag=GCA000010485_00224;product=methionine ABC transporter ATP-binding protein MetN;Dbxref=GO:0005524,GO:0005886,GO:0009276,GO:0016887,GO:0033232,GO:0048473;gene=metN;Parent=GCA000010485_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594016,BlastRules:WP_000594021,COG:COG1135,COG:E,RefSeq:WP_000593994.1,SO:0001217,UniParc:UPI000012EFFE,UniRef:UniRef100_P63356,UniRef:UniRef50_P30750,UniRef:UniRef90_P30750;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	240105	240677	.	+	.	ID=GCA000010485_00225_gene;locus_tag=GCA000010485_00225;gene=gmhB
contig_1	Pyrodigal	CDS	240105	240677	.	+	0	ID=GCA000010485_00225;Name=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;locus_tag=GCA000010485_00225;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;Dbxref=GO:0000287,GO:0005829,GO:0005975,GO:0008270,GO:0009244,GO:0016791,GO:0034200,GO:0097171;gene=gmhB;Parent=GCA000010485_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0241,COG:E,RefSeq:WP_001140167.1,SO:0001217,UniParc:UPI00000DE746,UniRef:UniRef100_Q8FKZ1,UniRef:UniRef50_P63228,UniRef:UniRef90_P63228;ec_number=3.1.3.82
contig_1	Infernal	gene	241042	242583	.	+	.	ID=GCA000010485_00226_gene;locus_tag=GCA000010485_00226;gene=rrs
contig_1	Infernal	rRNA	241042	242583	8.7e-48	+	.	ID=GCA000010485_00226;Name=16S ribosomal RNA;locus_tag=GCA000010485_00226;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_00226_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	242652	242728	.	+	.	ID=GCA000010485_00227_gene;locus_tag=GCA000010485_00227;gene=trnI
contig_1	tRNAscan-SE	tRNA	242652	242728	.	+	.	ID=GCA000010485_00227;Name=tRNA-Ile(gat);locus_tag=GCA000010485_00227;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000010485_00227_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	242771	242846	.	+	.	ID=GCA000010485_00228_gene;locus_tag=GCA000010485_00228;gene=trnA
contig_1	tRNAscan-SE	tRNA	242771	242846	.	+	.	ID=GCA000010485_00228;Name=tRNA-Ala(tgc);locus_tag=GCA000010485_00228;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000010485_00228_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Infernal	gene	242914	243022	.	+	.	ID=GCA000010485_00229_gene;locus_tag=GCA000010485_00229;gene=StyR-44
contig_1	Infernal	ncRNA	242914	243022	9.2e-22	+	.	ID=GCA000010485_00229;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_00229;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_00229_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	Infernal	gene	243030	245933	.	+	.	ID=GCA000010485_00230_gene;locus_tag=GCA000010485_00230;gene=rrl
contig_1	Infernal	rRNA	243030	245933	5.5e-06	+	.	ID=GCA000010485_00230;Name=23S ribosomal RNA;locus_tag=GCA000010485_00230;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_00230_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	246036	246151	.	+	.	ID=GCA000010485_00231_gene;locus_tag=GCA000010485_00231;gene=rrf
contig_1	Infernal	rRNA	246036	246151	2.2e-15	+	.	ID=GCA000010485_00231;Name=5S ribosomal RNA;locus_tag=GCA000010485_00231;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_00231_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	246206	246282	.	+	.	ID=GCA000010485_00232_gene;locus_tag=GCA000010485_00232;gene=trnD
contig_1	tRNAscan-SE	tRNA	246206	246282	.	+	.	ID=GCA000010485_00232;Name=tRNA-Asp(gtc);locus_tag=GCA000010485_00232;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000010485_00232_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	246445	247248	.	+	.	ID=GCA000010485_00233_gene;locus_tag=GCA000010485_00233;gene=dkgB
contig_1	Pyrodigal	CDS	246445	247248	.	+	0	ID=GCA000010485_00233;Name=2%2C5-didehydrogluconate reductase DkgB;locus_tag=GCA000010485_00233;product=2%2C5-didehydrogluconate reductase DkgB;Dbxref=GO:0004033,GO:0005737,GO:0019853,GO:0047681,GO:0047834,GO:0051596,GO:1990002;gene=dkgB;Parent=GCA000010485_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000997013.1,SO:0001217,UniParc:UPI0001C229E8,UniRef:UniRef100_A0A0C5E6S9,UniRef:UniRef50_P30863,UniRef:UniRef90_P30863;ec_number=1.1.1.346
contig_1	Pyrodigal	gene	247245	248159	.	-	.	ID=GCA000010485_00234_gene;locus_tag=GCA000010485_00234;gene=yafC
contig_1	Pyrodigal	CDS	247245	248159	.	-	0	ID=GCA000010485_00234;Name=DNA-binding transcriptional regulator YafC;locus_tag=GCA000010485_00234;product=DNA-binding transcriptional regulator YafC;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0010212;gene=yafC;Parent=GCA000010485_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000648564.1,SO:0001217,UniParc:UPI0001C229E9,UniRef:UniRef100_A0A066TA49,UniRef:UniRef50_Q9JXW7,UniRef:UniRef90_P30864
contig_1	Pyrodigal	gene	248376	249200	.	+	.	ID=GCA000010485_00235_gene;locus_tag=GCA000010485_00235
contig_1	Pyrodigal	CDS	248376	249200	.	+	0	ID=GCA000010485_00235;Name=endonuclease/exonuclease/phosphatase family protein;locus_tag=GCA000010485_00235;product=endonuclease/exonuclease/phosphatase family protein;Parent=GCA000010485_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000167D77,UniRef:UniRef100_A0A0D6I1K2,UniRef:UniRef50_P0A8U2,UniRef:UniRef90_A0A0D6I1K2
contig_1	Pyrodigal	gene	249278	250048	.	+	.	ID=GCA000010485_00236_gene;locus_tag=GCA000010485_00236
contig_1	Pyrodigal	CDS	249278	250048	.	+	0	ID=GCA000010485_00236;Name=Methyltransferase domain-containing protein;locus_tag=GCA000010485_00236;product=Methyltransferase domain-containing protein;Parent=GCA000010485_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000211691.1,SO:0001217,UniParc:UPI0001C229EA,UniRef:UniRef100_A0A061KTN2,UniRef:UniRef50_P30866,UniRef:UniRef90_A0A0A6T4X8
contig_1	Pyrodigal	gene	250097	251317	.	-	.	ID=GCA000010485_00237_gene;locus_tag=GCA000010485_00237;gene=mltD
contig_1	Pyrodigal	CDS	250097	251317	.	-	0	ID=GCA000010485_00237;Name=murein transglycosylase D;locus_tag=GCA000010485_00237;product=murein transglycosylase D;Dbxref=GO:0000270,GO:0005886,GO:0008932,GO:0008933,GO:0016020,GO:0071555;gene=mltD;Parent=GCA000010485_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1388,COG:M,SO:0001217,UniParc:UPI000176B6CC,UniRef:UniRef100_P0AEZ7,UniRef:UniRef50_P0AEZ7,UniRef:UniRef90_P0AEZ7;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	251527	252282	.	-	.	ID=GCA000010485_00238_gene;locus_tag=GCA000010485_00238;gene=gloB
contig_1	Pyrodigal	CDS	251527	252282	.	-	0	ID=GCA000010485_00238;Name=hydroxyacylglutathione hydrolase;locus_tag=GCA000010485_00238;product=hydroxyacylglutathione hydrolase;Dbxref=GO:0004416,GO:0019243,GO:0046872;gene=gloB;Parent=GCA000010485_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_001052747.1,SO:0001217,UniParc:UPI0001C229EB,UniRef:UniRef100_A0A066T5Y9,UniRef:UniRef50_P0AC84,UniRef:UniRef90_P0AC84;ec_number=3.1.2.6
contig_1	Pyrodigal	gene	252316	253038	.	+	.	ID=GCA000010485_00239_gene;locus_tag=GCA000010485_00239;gene=yafS
contig_1	Pyrodigal	CDS	252316	253038	.	+	0	ID=GCA000010485_00239;Name=putative protein YafS;locus_tag=GCA000010485_00239;product=putative protein YafS;Dbxref=GO:0006744,GO:0008425,GO:0008757;gene=yafS;Parent=GCA000010485_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_001295200.1,SO:0001217,UniParc:UPI00016A201B,UniRef:UniRef100_E2QFD5,UniRef:UniRef50_P75672,UniRef:UniRef90_P75672
contig_1	Pyrodigal	gene	253035	253502	.	-	.	ID=GCA000010485_00240_gene;locus_tag=GCA000010485_00240;gene=rnhA
contig_1	Pyrodigal	CDS	253035	253502	.	-	0	ID=GCA000010485_00240;Name=ribonuclease HI;locus_tag=GCA000010485_00240;product=ribonuclease HI;Dbxref=GO:0000287,GO:0003676,GO:0004523,GO:0005737,GO:0043137;gene=rnhA;Parent=GCA000010485_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,RefSeq:WP_000917890.1,SO:0001217,UniParc:UPI0001C229EC,UniRef:UniRef100_A0A066TAC8,UniRef:UniRef50_P0A7Y4,UniRef:UniRef90_P0A7Y4;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	253558	254298	.	+	.	ID=GCA000010485_00241_gene;locus_tag=GCA000010485_00241;gene=dnaQ
contig_1	Pyrodigal	CDS	253558	254298	.	+	0	ID=GCA000010485_00241;Name=DNA polymerase III subunit epsilon;locus_tag=GCA000010485_00241;product=DNA polymerase III subunit epsilon;Dbxref=GO:0003677,GO:0003887,GO:0005829,GO:0006260,GO:0008408,GO:0045004,GO:0046872;gene=dnaQ;Parent=GCA000010485_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,SO:0001217,UniParc:UPI000209C66D,UniRef:UniRef100_A0A1U9U382,UniRef:UniRef50_P03007,UniRef:UniRef90_P03007;ec_number=2.7.7.7
contig_1	tRNAscan-SE	gene	254431	254507	.	+	.	ID=GCA000010485_00242_gene;locus_tag=GCA000010485_00242;gene=trnD
contig_1	tRNAscan-SE	tRNA	254431	254507	.	+	.	ID=GCA000010485_00242;Name=tRNA-Asp(gtc);locus_tag=GCA000010485_00242;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000010485_00242_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	254606	255376	.	-	.	ID=GCA000010485_00243_gene;locus_tag=GCA000010485_00243;gene=yafV
contig_1	Pyrodigal	CDS	254606	255376	.	-	0	ID=GCA000010485_00243;Name=2-oxoglutaramate amidase;locus_tag=GCA000010485_00243;product=2-oxoglutaramate amidase;Dbxref=GO:0008152,GO:0050152,GO:0106008;gene=yafV;Parent=GCA000010485_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001118052,COG:COG0388,COG:V,RefSeq:WP_001118016.1,SO:0001217,UniParc:UPI000187BA5A,UniRef:UniRef100_A0A061KRP7,UniRef:UniRef50_Q47679,UniRef:UniRef90_Q47679;ec_number=3.5.1.3
contig_1	Pyrodigal	gene	255557	256003	.	+	.	ID=GCA000010485_00244_gene;locus_tag=GCA000010485_00244;gene=ivy
contig_1	Pyrodigal	CDS	255557	256003	.	+	0	ID=GCA000010485_00244;Name=Ivy family C-type lysozyme inhibitor;locus_tag=GCA000010485_00244;product=Ivy family C-type lysozyme inhibitor;Dbxref=GO:0030288,GO:0042803,GO:0060241,GO:0061077;gene=ivy;Parent=GCA000010485_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001308392.1,SO:0001217,UniParc:UPI0000F0BDDB,UniRef:UniRef100_P0AD59,UniRef:UniRef50_P0AD59,UniRef:UniRef90_P0AD59
contig_1	Pyrodigal	gene	256046	258490	.	-	.	ID=GCA000010485_00245_gene;locus_tag=GCA000010485_00245;gene=fadE
contig_1	Pyrodigal	CDS	256046	258490	.	-	0	ID=GCA000010485_00245;Name=acyl-CoA dehydrogenase FadE;locus_tag=GCA000010485_00245;product=acyl-CoA dehydrogenase FadE;Dbxref=GO:0003995,GO:0004466,GO:0005737,GO:0033539,GO:0050660,GO:0070991;gene=fadE;Parent=GCA000010485_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,KEGG:K06445,RefSeq:WP_000973095.1,SO:0001217,UniParc:UPI0001E8BAD7,UniRef:UniRef100_A0A066TA61,UniRef:UniRef50_Q47146,UniRef:UniRef90_Q47146;ec_number=1.3.8.8
contig_1	Pyrodigal	gene	258730	259308	.	+	.	ID=GCA000010485_00246_gene;locus_tag=GCA000010485_00246;gene=lpcA
contig_1	Pyrodigal	CDS	258730	259308	.	+	0	ID=GCA000010485_00246;Name=D-sedoheptulose 7-phosphate isomerase;locus_tag=GCA000010485_00246;product=D-sedoheptulose 7-phosphate isomerase;Dbxref=GO:0005737,GO:0008270,GO:0008968,GO:0009244,GO:0097367,GO:1901135,GO:2001061;gene=lpcA;Parent=GCA000010485_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03271,RefSeq:WP_000284050.1,SO:0001217,UniParc:UPI000012E838,UniRef:UniRef100_P63224,UniRef:UniRef50_P63224,UniRef:UniRef90_P63224;ec_number=5.3.1.28
contig_1	Infernal	gene	259319	259396	.	+	.	ID=GCA000010485_00247_gene;locus_tag=GCA000010485_00247;gene=naRNA4
contig_1	Infernal	ncRNA	259319	259396	4.6e-12	+	.	ID=GCA000010485_00247;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00247;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00247_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	259513	260280	.	+	.	ID=GCA000010485_00248_gene;locus_tag=GCA000010485_00248;gene=yafJ
contig_1	Pyrodigal	CDS	259513	260280	.	+	0	ID=GCA000010485_00248;Name=Putative glutamine amidotransferase YafJ;locus_tag=GCA000010485_00248;product=Putative glutamine amidotransferase YafJ;Dbxref=GO:0016740;gene=yafJ;Parent=GCA000010485_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000333380.1,SO:0001217,UniParc:UPI000013A081,UniRef:UniRef100_Q47147,UniRef:UniRef50_Q47147,UniRef:UniRef90_Q47147;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	260251	260991	.	-	.	ID=GCA000010485_00249_gene;locus_tag=GCA000010485_00249;gene=dpaA
contig_1	Pyrodigal	CDS	260251	260991	.	-	0	ID=GCA000010485_00249;Name=peptidoglycan meso-diaminopimelic acid protein amidase;locus_tag=GCA000010485_00249;product=peptidoglycan meso-diaminopimelic acid protein amidase;Dbxref=GO:0000270,GO:0004175,GO:0004180,GO:0008360,GO:0009252,GO:0016757,GO:0071555;gene=dpaA;Parent=GCA000010485_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3034,COG:M,RefSeq:WP_001225679.1,SO:0001217,UniParc:UPI000013A083,UniRef:UniRef100_P0AA99,UniRef:UniRef50_P0AA99,UniRef:UniRef90_P0AA99;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	261294	262052	.	+	.	ID=GCA000010485_00250_gene;locus_tag=GCA000010485_00250;gene=yafL
contig_1	Pyrodigal	CDS	261294	262052	.	+	0	ID=GCA000010485_00250;Name=Putative endopeptidase YafL;locus_tag=GCA000010485_00250;product=Putative endopeptidase YafL;gene=yafL;Parent=GCA000010485_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19303,SO:0001217,UniParc:UPI0001C229F0,UniRef:UniRef100_A0A066T600,UniRef:UniRef50_Q47151,UniRef:UniRef90_A0A370UZY1;ec_number=3.4.-.-
contig_1	Infernal	gene	262052	262128	.	+	.	ID=GCA000010485_00251_gene;locus_tag=GCA000010485_00251;gene=naRNA4
contig_1	Infernal	ncRNA	262052	262128	6.1e-10	+	.	ID=GCA000010485_00251;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00251;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00251_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	262228	262725	.	+	.	ID=GCA000010485_00252_gene;locus_tag=GCA000010485_00252;gene=rayT
contig_1	Pyrodigal	CDS	262228	262725	.	+	0	ID=GCA000010485_00252;Name=REP-associated tyrosine transposase RayT;locus_tag=GCA000010485_00252;product=REP-associated tyrosine transposase RayT;gene=rayT;Parent=GCA000010485_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000006255,RefSeq:WP_000006240.1,SO:0001217,UniParc:UPI0001C229F1,UniRef:UniRef100_A0A061KVL5,UniRef:UniRef50_A0A0K0HHC2,UniRef:UniRef90_D3GS78
contig_1	Infernal	gene	262793	262869	.	+	.	ID=GCA000010485_00253_gene;locus_tag=GCA000010485_00253;gene=naRNA4
contig_1	Infernal	ncRNA	262793	262869	2.2e-08	+	.	ID=GCA000010485_00253;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00253;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00253_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	262945	264684	.	-	.	ID=GCA000010485_00254_gene;locus_tag=GCA000010485_00254;gene=lfhA
contig_1	Pyrodigal	CDS	262945	264684	.	-	0	ID=GCA000010485_00254;Name=Putative truncated flagellar export/assembly protein LfhA;locus_tag=GCA000010485_00254;product=Putative truncated flagellar export/assembly protein LfhA;Dbxref=GO:0005886,GO:0009306,GO:0044780;gene=lfhA;Parent=GCA000010485_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C229F2,UniRef:UniRef100_A0A3I1SEG2,UniRef:UniRef50_Q47153,UniRef:UniRef90_Q47153
contig_1	Pyrodigal	gene	264779	265414	.	+	.	ID=GCA000010485_00255_gene;locus_tag=GCA000010485_00255;gene=lafU
contig_1	Pyrodigal	CDS	264779	265414	.	+	0	ID=GCA000010485_00255;Name=putative lateral flagellar export/assembly protein LafU;locus_tag=GCA000010485_00255;product=putative lateral flagellar export/assembly protein LafU;gene=lafU;Parent=GCA000010485_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000289FCF7,UniRef:UniRef100_A0A0J2B3D1,UniRef:UniRef50_Q47154,UniRef:UniRef90_Q47154
contig_1	Pyrodigal	gene	265485	266540	.	+	.	ID=GCA000010485_00256_gene;locus_tag=GCA000010485_00256;gene=dinB
contig_1	Pyrodigal	CDS	265485	266540	.	+	0	ID=GCA000010485_00256;Name=DNA polymerase IV;locus_tag=GCA000010485_00256;product=DNA polymerase IV;Dbxref=GO:0000287,GO:0003684,GO:0003887,GO:0005829,GO:0006261,GO:0006281,GO:0009432,GO:0042276;gene=dinB;Parent=GCA000010485_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_001226176.1,SO:0001217,UniParc:UPI0001C229F4,UniRef:UniRef100_A0A066T115,UniRef:UniRef50_Q47155,UniRef:UniRef90_Q47155;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	266615	266989	.	+	.	ID=GCA000010485_00257_gene;locus_tag=GCA000010485_00257
contig_1	Pyrodigal	CDS	266615	266989	.	+	0	ID=GCA000010485_00257;Name=GNAT family N-acetyltransferase;locus_tag=GCA000010485_00257;product=GNAT family N-acetyltransferase;Parent=GCA000010485_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377DXU3,UniRef:UniRef90_A0A377DXU3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	267179	268318	.	+	.	ID=GCA000010485_00258_gene;locus_tag=GCA000010485_00258;gene=rtcB2
contig_1	Pyrodigal	CDS	267179	268318	.	+	0	ID=GCA000010485_00258;Name=RNA ligase RtcB family protein;locus_tag=GCA000010485_00258;product=RNA ligase RtcB family protein;Dbxref=GO:0003972,GO:0005525,GO:0006396,GO:0008452,GO:0042245,GO:0046872;gene=rtcB2;Parent=GCA000010485_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18148,RefSeq:WP_000521559.1,SO:0001217,UniParc:UPI0001E8C1C1,UniRef:UniRef100_A0A1U9TZE9,UniRef:UniRef50_P0DX91,UniRef:UniRef90_P0DX91;ec_number=6.5.1.8
contig_1	Pyrodigal	gene	268315	268929	.	+	.	ID=GCA000010485_00259_gene;locus_tag=GCA000010485_00259;gene=prfH
contig_1	Pyrodigal	CDS	268315	268929	.	+	0	ID=GCA000010485_00259;Name=peptide chain release factor H;locus_tag=GCA000010485_00259;product=peptide chain release factor H;Dbxref=GO:0003747,GO:0006415,GO:0019843,GO:0042245;gene=prfH;Parent=GCA000010485_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02839,RefSeq:WP_000602123.1,SO:0001217,UniParc:UPI0000D50656,UniRef:UniRef100_A0A061KQQ5,UniRef:UniRef50_P0DX90,UniRef:UniRef90_P0DX90
contig_1	Pyrodigal	gene	268985	270442	.	-	.	ID=GCA000010485_00260_gene;locus_tag=GCA000010485_00260;gene=pepD
contig_1	Pyrodigal	CDS	268985	270442	.	-	0	ID=GCA000010485_00260;Name=cytosol nonspecific dipeptidase;locus_tag=GCA000010485_00260;product=cytosol nonspecific dipeptidase;Dbxref=GO:0005829,GO:0006508,GO:0008270,GO:0016787,GO:0016805,GO:0042803,GO:0043171,GO:0070573;gene=pepD;Parent=GCA000010485_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01270,RefSeq:WP_001293022.1,SO:0001217,UniParc:UPI0001C229F6,UniRef:UniRef100_A0A066SWZ0,UniRef:UniRef50_P15288,UniRef:UniRef90_P15288;ec_number=3.4.13.18
contig_1	Pyrodigal	gene	270703	271161	.	+	.	ID=GCA000010485_00261_gene;locus_tag=GCA000010485_00261;gene=gpt
contig_1	Pyrodigal	CDS	270703	271161	.	+	0	ID=GCA000010485_00261;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000010485_00261;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000287,GO:0000310,GO:0004422,GO:0005829,GO:0005886,GO:0006166,GO:0009116,GO:0032263,GO:0032264,GO:0032265,GO:0052657;gene=gpt;Parent=GCA000010485_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00769,RefSeq:WP_001291991.1,SO:0001217,UniParc:UPI00000DE798,UniRef:UniRef100_B7UJC6,UniRef:UniRef50_P0A9M5,UniRef:UniRef90_P0A9M5;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	271253	272497	.	+	.	ID=GCA000010485_00262_gene;locus_tag=GCA000010485_00262;gene=frsA
contig_1	Pyrodigal	CDS	271253	272497	.	+	0	ID=GCA000010485_00262;Name=esterase FrsA;locus_tag=GCA000010485_00262;product=esterase FrsA;Dbxref=GO:0016788,GO:0106435;gene=frsA;Parent=GCA000010485_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1506,COG:E,KEGG:K11750,RefSeq:WP_000189575.1,SO:0001217,UniParc:UPI0001C229F7,UniRef:UniRef100_A0A066T599,UniRef:UniRef50_P04335,UniRef:UniRef90_P04335;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	272555	272956	.	+	.	ID=GCA000010485_00263_gene;locus_tag=GCA000010485_00263;gene=crl
contig_1	Pyrodigal	CDS	272555	272956	.	+	0	ID=GCA000010485_00263;Name=sigma factor-binding protein Crl;locus_tag=GCA000010485_00263;product=sigma factor-binding protein Crl;Dbxref=GO:0005737,GO:0045893;gene=crl;Parent=GCA000010485_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000174703.1,SO:0001217,UniParc:UPI00005EF6AF,UniRef:UniRef100_B7MC90,UniRef:UniRef50_P24251,UniRef:UniRef90_P24251
contig_1	Pyrodigal	gene	272995	274050	.	-	.	ID=GCA000010485_00264_gene;locus_tag=GCA000010485_00264;gene=phoE
contig_1	Pyrodigal	CDS	272995	274050	.	-	0	ID=GCA000010485_00264;Name=phosphoporin PhoE;locus_tag=GCA000010485_00264;product=phosphoporin PhoE;Dbxref=GO:0009279,GO:0015288,GO:0016020,GO:0034220,GO:0046930;gene=phoE;Parent=GCA000010485_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000749899.1,SO:0001217,UniParc:UPI00018870DB,UniRef:UniRef100_A0A061YFB2,UniRef:UniRef50_P02932,UniRef:UniRef90_P02932
contig_1	Pyrodigal	gene	274339	275442	.	+	.	ID=GCA000010485_00265_gene;locus_tag=GCA000010485_00265;gene=proB
contig_1	Pyrodigal	CDS	274339	275442	.	+	0	ID=GCA000010485_00265;Name=Glutamate 5-kinase;locus_tag=GCA000010485_00265;product=Glutamate 5-kinase;Dbxref=GO:0003723,GO:0004349,GO:0005524,GO:0005829,GO:0055129;gene=proB;Parent=GCA000010485_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0263,COG:E,RefSeq:WP_001285288.1,SO:0001217,UniParc:UPI000003EB07,UniRef:UniRef100_P0A7B5,UniRef:UniRef50_P0A7B5,UniRef:UniRef90_P0A7B5;ec_number=2.7.2.11
contig_1	Pyrodigal	gene	275454	276707	.	+	.	ID=GCA000010485_00266_gene;locus_tag=GCA000010485_00266;gene=proA
contig_1	Pyrodigal	CDS	275454	276707	.	+	0	ID=GCA000010485_00266;Name=glutamate-5-semialdehyde dehydrogenase;locus_tag=GCA000010485_00266;product=glutamate-5-semialdehyde dehydrogenase;Dbxref=GO:0004350,GO:0005737,GO:0006561,GO:0016620,GO:0050661,GO:0055129;gene=proA;Parent=GCA000010485_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0014,COG:E,KEGG:K00147,RefSeq:WP_000893315.1,SO:0001217,UniParc:UPI0001C229F8,UniRef:UniRef100_A0A066T125,UniRef:UniRef50_P07004,UniRef:UniRef90_P07004;ec_number=1.2.1.41
contig_1	tRNAscan-SE	gene	276822	276897	.	+	.	ID=GCA000010485_00267_gene;locus_tag=GCA000010485_00267;gene=trnT
contig_1	tRNAscan-SE	tRNA	276822	276897	.	+	.	ID=GCA000010485_00267;Name=tRNA-Thr(cgt);locus_tag=GCA000010485_00267;product=tRNA-Thr(cgt);gene=trnT;anti_codon=cgt;amino_acid=Thr;Parent=GCA000010485_00267_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Pyrodigal	gene	277261	277731	.	-	.	ID=GCA000010485_00268_gene;locus_tag=GCA000010485_00268
contig_1	Pyrodigal	CDS	277261	277731	.	-	0	ID=GCA000010485_00268;Name=hypothetical protein;locus_tag=GCA000010485_00268;product=hypothetical protein;Parent=GCA000010485_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000201175.1,SO:0001217,UniParc:UPI00021858DA,UniRef:UniRef100_A0A061KTE7,UniRef:UniRef50_A0A061KTE7,UniRef:UniRef90_A0A061KTE7
contig_1	Infernal	gene	277783	277871	.	-	.	ID=GCA000010485_00269_gene;locus_tag=GCA000010485_00269;gene=C4
contig_1	Infernal	ncRNA	277783	277871	1.5e-11	-	.	ID=GCA000010485_00269;Name=C4 antisense RNA;locus_tag=GCA000010485_00269;product=C4 antisense RNA;Dbxref=RFAM:RF01695;Parent=GCA000010485_00269_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF01695
contig_1	Infernal	gene	277893	277970	.	-	.	ID=GCA000010485_00270_gene;locus_tag=GCA000010485_00270;gene=isrK
contig_1	Infernal	ncRNA	277893	277970	2.3e-10	-	.	ID=GCA000010485_00270;Name=isrK Hfq binding RNA;locus_tag=GCA000010485_00270;gene=isrK;product=isrK Hfq binding RNA;Dbxref=RFAM:RF01394;Parent=GCA000010485_00270_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01394
contig_1	Pyrodigal	gene	278074	279321	.	-	.	ID=GCA000010485_00271_gene;locus_tag=GCA000010485_00271
contig_1	Pyrodigal	CDS	278074	279321	.	-	0	ID=GCA000010485_00271;Name=Restriction endonuclease subunit S;locus_tag=GCA000010485_00271;product=Restriction endonuclease subunit S;Parent=GCA000010485_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000671528.1,SO:0001217,UniParc:UPI0001C229FA,UniRef:UniRef100_A0A066SXD1,UniRef:UniRef50_A0A066SXD1,UniRef:UniRef90_A0A066SXD1;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	279311	280948	.	-	.	ID=GCA000010485_00272_gene;locus_tag=GCA000010485_00272
contig_1	Pyrodigal	CDS	279311	280948	.	-	0	ID=GCA000010485_00272;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000010485_00272;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000010485_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_000229741.1,SO:0001217,UniParc:UPI0001C229FB,UniRef:UniRef100_A0A066SWZ8,UniRef:UniRef50_C8NDJ9,UniRef:UniRef90_A0A2X7VTU1;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	280942	284040	.	-	.	ID=GCA000010485_00273_gene;locus_tag=GCA000010485_00273
contig_1	Pyrodigal	CDS	280942	284040	.	-	0	ID=GCA000010485_00273;Name=type I site-specific deoxyribonuclease;locus_tag=GCA000010485_00273;product=type I site-specific deoxyribonuclease;Parent=GCA000010485_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01153,RefSeq:WP_000673070.1,SO:0001217,UniParc:UPI0001C22A2C,UniRef:UniRef100_A0A066T129,UniRef:UniRef50_A0A1U7DPC4,UniRef:UniRef90_A0A379T3K3;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	284324	285106	.	+	.	ID=GCA000010485_00274_gene;locus_tag=GCA000010485_00274
contig_1	Pyrodigal	CDS	284324	285106	.	+	0	ID=GCA000010485_00274;Name=Transcriptional regulator AbiEi antitoxin N-terminal domain-containing protein;locus_tag=GCA000010485_00274;product=Transcriptional regulator AbiEi antitoxin N-terminal domain-containing protein;Parent=GCA000010485_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295795.1,SO:0001217,UniParc:UPI00021858DD,UniRef:UniRef100_A0AAN4DZU9,UniRef:UniRef50_D2TQV1,UniRef:UniRef90_A0A2T8J647
contig_1	Pyrodigal	gene	285093	286013	.	+	.	ID=GCA000010485_00275_gene;locus_tag=GCA000010485_00275
contig_1	Pyrodigal	CDS	285093	286013	.	+	0	ID=GCA000010485_00275;Name=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;locus_tag=GCA000010485_00275;product=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;Parent=GCA000010485_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000365807.1,SO:0001217,UniParc:UPI0001C22A2E,UniRef:UniRef100_A0A061KTE0,UniRef:UniRef50_A0A0H3GH11,UniRef:UniRef90_A0A2K3TY15
contig_1	Pyrodigal	gene	286178	286954	.	-	.	ID=GCA000010485_00276_gene;locus_tag=GCA000010485_00276
contig_1	Pyrodigal	CDS	286178	286954	.	-	0	ID=GCA000010485_00276;Name=Integrase;locus_tag=GCA000010485_00276;product=Integrase;Parent=GCA000010485_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171155.1,SO:0001217,UniParc:UPI0001C22A2F,UniRef:UniRef100_A0A061KRF9,UniRef:UniRef50_A0A061KRF9,UniRef:UniRef90_A0A061KRF9
contig_1	Pyrodigal	gene	287162	287497	.	-	.	ID=GCA000010485_00277_gene;locus_tag=GCA000010485_00277
contig_1	Pyrodigal	CDS	287162	287497	.	-	0	ID=GCA000010485_00277;Name=Integrase DNA-binding domain-containing protein;locus_tag=GCA000010485_00277;product=Integrase DNA-binding domain-containing protein;Parent=GCA000010485_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021858DE,UniRef:UniRef100_A0A066SX00,UniRef:UniRef50_A0A8S0G273,UniRef:UniRef90_A0A8S0G273
contig_1	tRNAscan-SE	gene	287633	287709	.	+	.	ID=GCA000010485_00278_gene;locus_tag=GCA000010485_00278;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	287633	287709	.	+	.	ID=GCA000010485_00278;Name=tRNA-Xxx;locus_tag=GCA000010485_00278;product=tRNA-Xxx;pseudogene=unknown;Parent=GCA000010485_00278_gene;inference=profile:tRNAscan:2.0
contig_1	Pyrodigal	gene	288331	288945	.	+	.	ID=GCA000010485_00279_gene;locus_tag=GCA000010485_00279;gene=yagU
contig_1	Pyrodigal	CDS	288331	288945	.	+	0	ID=GCA000010485_00279;Name=Inner membrane protein YagU;locus_tag=GCA000010485_00279;product=Inner membrane protein YagU;Dbxref=GO:0005886,GO:0010447;gene=yagU;Parent=GCA000010485_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08996,RefSeq:WP_001019923.1,SO:0001217,UniParc:UPI00000DE7A3,UniRef:UniRef100_E2QG48,UniRef:UniRef50_P0AAA1,UniRef:UniRef90_P0AAA1
contig_1	Infernal	gene	288951	289151	.	+	.	ID=GCA000010485_00280_gene;locus_tag=GCA000010485_00280;gene=IS009
contig_1	Infernal	ncRNA	288951	289151	5.4e-25	+	.	ID=GCA000010485_00280;Name=IS009;locus_tag=GCA000010485_00280;product=IS009;Dbxref=RFAM:RF02111;Parent=GCA000010485_00280_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02111
contig_1	Pyrodigal	gene	289830	290540	.	-	.	ID=GCA000010485_00281_gene;locus_tag=GCA000010485_00281;gene=ecpE
contig_1	Pyrodigal	CDS	289830	290540	.	-	0	ID=GCA000010485_00281;Name=fimbrial chaperone EcpE;locus_tag=GCA000010485_00281;product=fimbrial chaperone EcpE;gene=ecpE;Parent=GCA000010485_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001301550,KEGG:K21968,RefSeq:WP_001295798.1,SO:0001217,UniParc:UPI0000DACD21,UniRef:UniRef100_Q8CWC2,UniRef:UniRef50_P77263,UniRef:UniRef90_P77263
contig_1	Pyrodigal	gene	290509	292152	.	-	.	ID=GCA000010485_00282_gene;locus_tag=GCA000010485_00282;gene=ecpD
contig_1	Pyrodigal	CDS	290509	292152	.	-	0	ID=GCA000010485_00282;Name=polymerized tip adhesin of ECP fibers;locus_tag=GCA000010485_00282;product=polymerized tip adhesin of ECP fibers;Dbxref=GO:0009289;gene=ecpD;Parent=GCA000010485_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21967,RefSeq:WP_001265649.1,SO:0001217,UniParc:UPI0001C22A32,UniRef:UniRef100_A0A7I0L2W2,UniRef:UniRef50_B7UJD8,UniRef:UniRef90_B7UJD8,VFDB:VFC0001,VFDB:VFG002416
contig_1	Pyrodigal	gene	292142	294667	.	-	.	ID=GCA000010485_00283_gene;locus_tag=GCA000010485_00283;gene=ecpC
contig_1	Pyrodigal	CDS	292142	294667	.	-	0	ID=GCA000010485_00283;Name=fimbrial usher EcpC;locus_tag=GCA000010485_00283;product=fimbrial usher EcpC;gene=ecpC;Parent=GCA000010485_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001131063,COG:COG3188,COG:NW,KEGG:K21966,RefSeq:WP_001131109.1,SO:0001217,UniParc:UPI0000D50668,UniRef:UniRef100_D5CVJ8,UniRef:UniRef50_D5CVJ8,UniRef:UniRef90_D5CVJ8
contig_1	Pyrodigal	gene	294693	295361	.	-	.	ID=GCA000010485_00284_gene;locus_tag=GCA000010485_00284;gene=ecpB
contig_1	Pyrodigal	CDS	294693	295361	.	-	0	ID=GCA000010485_00284;Name=fimbrial chaperone EcpB;locus_tag=GCA000010485_00284;product=fimbrial chaperone EcpB;gene=ecpB;Parent=GCA000010485_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000716386,RefSeq:WP_000716404.1,SO:0001217,UniParc:UPI00005EF67A,UniRef:UniRef100_B7UJE0,UniRef:UniRef50_D5CVJ9,UniRef:UniRef90_D5CVJ9
contig_1	Pyrodigal	gene	295418	296005	.	-	.	ID=GCA000010485_00285_gene;locus_tag=GCA000010485_00285;gene=ecpA
contig_1	Pyrodigal	CDS	295418	296005	.	-	0	ID=GCA000010485_00285;Name=common pilus major fimbrillin subunit EcpA;locus_tag=GCA000010485_00285;product=common pilus major fimbrillin subunit EcpA;Dbxref=GO:0009289;gene=ecpA;Parent=GCA000010485_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000730972,RefSeq:WP_000730982.1,SO:0001217,UniParc:UPI00000BAE09,UniRef:UniRef100_P0C8Z9,UniRef:UniRef50_Q8CWB9,UniRef:UniRef90_Q8CWB9
contig_1	Pyrodigal	gene	296080	296622	.	-	.	ID=GCA000010485_00286_gene;locus_tag=GCA000010485_00286;gene=ecpR
contig_1	Pyrodigal	CDS	296080	296622	.	-	0	ID=GCA000010485_00286;Name=regulator protein EcpR;locus_tag=GCA000010485_00286;product=regulator protein EcpR;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=ecpR;Parent=GCA000010485_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21963,RefSeq:WP_000389022.1,SO:0001217,UniParc:UPI0000DACD23,UniRef:UniRef100_B7UJE2,UniRef:UniRef50_P71301,UniRef:UniRef90_P71301,VFDB:VFC0001,VFDB:VFG002413
contig_1	Pyrodigal	gene	297706	297846	.	-	.	ID=GCA000010485_00287_gene;locus_tag=GCA000010485_00287
contig_1	Pyrodigal	CDS	297706	297846	.	-	0	ID=GCA000010485_00287;Name=Large ribosomal subunit protein bL36B;locus_tag=GCA000010485_00287;product=Large ribosomal subunit protein bL36B;Parent=GCA000010485_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000866436.1,SO:0001217,UniParc:UPI00001B50F9,UniRef:UniRef100_Q2EEQ2,UniRef:UniRef90_Q2EEQ2
contig_1	Pyrodigal	gene	297846	298112	.	-	.	ID=GCA000010485_00288_gene;locus_tag=GCA000010485_00288;gene=rpmE2
contig_1	Pyrodigal	CDS	297846	298112	.	-	0	ID=GCA000010485_00288;Name=type B 50S ribosomal protein L31;locus_tag=GCA000010485_00288;product=type B 50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmE2;Parent=GCA000010485_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977516.1,SO:0001217,UniParc:UPI0000167D7A,UniRef:UniRef100_P0A7N1,UniRef:UniRef50_P0A7N1,UniRef:UniRef90_P0A7N1
contig_1	Pyrodigal	gene	298474	298575	.	-	.	ID=GCA000010485_00289_gene;locus_tag=GCA000010485_00289;gene=ykgR
contig_1	Pyrodigal	CDS	298474	298575	.	-	0	ID=GCA000010485_00289;Name=small membrane protein YkgR;locus_tag=GCA000010485_00289;product=small membrane protein YkgR;Dbxref=GO:0005886;gene=ykgR;Parent=GCA000010485_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000662258.1,SO:0001217,UniParc:UPI00015C49F8,UniRef:UniRef100_C1P5Z8,UniRef:UniRef50_C1P5Z8,UniRef:UniRef90_C1P5Z8
contig_1	Pyrodigal	gene	299048	300190	.	-	.	ID=GCA000010485_00290_gene;locus_tag=GCA000010485_00290
contig_1	Pyrodigal	CDS	299048	300190	.	-	0	ID=GCA000010485_00290;Name=NADH-dependent flavin oxidoreductase;locus_tag=GCA000010485_00290;product=NADH-dependent flavin oxidoreductase;Parent=GCA000010485_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182343.1,SO:0001217,UniParc:UPI0001C22A34,UniRef:UniRef100_A0A061YJF2,UniRef:UniRef50_A0A0C4YKA1,UniRef:UniRef90_A0A0D6I339
contig_1	Pyrodigal	gene	300363	301283	.	-	.	ID=GCA000010485_00291_gene;locus_tag=GCA000010485_00291
contig_1	Pyrodigal	CDS	300363	301283	.	-	0	ID=GCA000010485_00291;Name=Hydrolase;locus_tag=GCA000010485_00291;product=Hydrolase;Parent=GCA000010485_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000860035.1,SO:0001217,UniParc:UPI0001C22A35,UniRef:UniRef100_A0A061KTC0,UniRef:UniRef50_A0A0F7U3Q2,UniRef:UniRef90_A0A0D8W5Q8
contig_1	Pyrodigal	gene	301440	302366	.	+	.	ID=GCA000010485_00292_gene;locus_tag=GCA000010485_00292;gene=lysR
contig_1	Pyrodigal	CDS	301440	302366	.	+	0	ID=GCA000010485_00292;Name=LysR family transcriptional regulator;locus_tag=GCA000010485_00292;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000010485_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001524125.1,SO:0001217,UniParc:UPI0001C22A36,UniRef:UniRef100_A0A061YIQ2,UniRef:UniRef50_A0A833PKB6,UniRef:UniRef90_A0A0Q3IMI9
contig_1	Pyrodigal	gene	302566	303459	.	+	.	ID=GCA000010485_00293_gene;locus_tag=GCA000010485_00293
contig_1	Pyrodigal	CDS	302566	303459	.	+	0	ID=GCA000010485_00293;Name=D-malate degradation protein R;locus_tag=GCA000010485_00293;product=D-malate degradation protein R;Parent=GCA000010485_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000910713.1,SO:0001217,UniParc:UPI0001C22A37,UniRef:UniRef100_A0A061YF59,UniRef:UniRef50_A6UHX2,UniRef:UniRef90_A0A485AYI3
contig_1	Pyrodigal	gene	303490	304479	.	-	.	ID=GCA000010485_00294_gene;locus_tag=GCA000010485_00294;gene=pdxI
contig_1	Pyrodigal	CDS	303490	304479	.	-	0	ID=GCA000010485_00294;Name=Aldo/keto reductase;locus_tag=GCA000010485_00294;product=Aldo/keto reductase;gene=pdxI;Parent=GCA000010485_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_001172283.1,SO:0001217,UniParc:UPI0001C22A38,UniRef:UniRef100_A0A066T149,UniRef:UniRef50_A0A4R3A1T9,UniRef:UniRef90_A0A074P458
contig_1	Pyrodigal	gene	304506	305357	.	-	.	ID=GCA000010485_00295_gene;locus_tag=GCA000010485_00295;gene=aRA1
contig_1	Pyrodigal	CDS	304506	305357	.	-	0	ID=GCA000010485_00295;Name=Aldo/keto reductase;locus_tag=GCA000010485_00295;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000010485_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_001174452.1,SO:0001217,UniParc:UPI00000DE7AA,UniRef:UniRef100_E2QG62,UniRef:UniRef50_A0A0Q2YG64,UniRef:UniRef90_A0A0Q2YG64
contig_1	Pyrodigal	gene	305923	310170	.	+	.	ID=GCA000010485_00296_gene;locus_tag=GCA000010485_00296;gene=fdeC
contig_1	Pyrodigal	CDS	305923	310170	.	+	0	ID=GCA000010485_00296;Name=inverse autotransporter adhesin FdeC;locus_tag=GCA000010485_00296;product=inverse autotransporter adhesin FdeC;gene=fdeC;Parent=GCA000010485_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000092542,NCBIProtein:ABE05822.1,RefSeq:WP_000092553.1,SO:0001217,UniParc:UPI0001C22A39,UniRef:UniRef100_A0A7I0KTQ7,UniRef:UniRef50_A0A7U9H6R6,UniRef:UniRef90_E8Q5F6
contig_1	Pyrodigal	gene	310295	311152	.	-	.	ID=GCA000010485_00297_gene;locus_tag=GCA000010485_00297
contig_1	Pyrodigal	CDS	310295	311152	.	-	0	ID=GCA000010485_00297;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000010485_00297;product=HTH araC/xylS-type domain-containing protein;Parent=GCA000010485_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05804,RefSeq:WP_000620995.1,SO:0001217,UniParc:UPI000187BAC6,UniRef:UniRef100_A0A1X9VHY3,UniRef:UniRef50_P77601,UniRef:UniRef90_W1WIC9
contig_1	Pyrodigal	gene	311400	312269	.	+	.	ID=GCA000010485_00298_gene;locus_tag=GCA000010485_00298
contig_1	Pyrodigal	CDS	311400	312269	.	+	0	ID=GCA000010485_00298;Name=Aldo/keto reductase;locus_tag=GCA000010485_00298;product=Aldo/keto reductase;Parent=GCA000010485_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295799.1,SO:0001217,UniParc:UPI0000DACD27,UniRef:UniRef100_A0A066SX16,UniRef:UniRef50_A0A066SX16,UniRef:UniRef90_A0A066SX16
contig_1	Pyrodigal	gene	312429	313022	.	-	.	ID=GCA000010485_00299_gene;locus_tag=GCA000010485_00299;gene=rclC
contig_1	Pyrodigal	CDS	312429	313022	.	-	0	ID=GCA000010485_00299;Name=reactive chlorine species resistance protein RclC;locus_tag=GCA000010485_00299;product=reactive chlorine species resistance protein RclC;Dbxref=GO:0005886,GO:1901530;gene=rclC;Parent=GCA000010485_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001299021,KEGG:K21741,RefSeq:WP_001295800.1,SO:0001217,UniParc:UPI000187BAC7,UniRef:UniRef100_A0A135XXR8,UniRef:UniRef50_P75685,UniRef:UniRef90_P75685
contig_1	Pyrodigal	gene	313379	314704	.	-	.	ID=GCA000010485_00300_gene;locus_tag=GCA000010485_00300;gene=rclA
contig_1	Pyrodigal	CDS	313379	314704	.	-	0	ID=GCA000010485_00300;Name=reactive chlorine resistance oxidoreductase RclA;locus_tag=GCA000010485_00300;product=reactive chlorine resistance oxidoreductase RclA;Dbxref=GO:0008823,GO:0016651,GO:0016668,GO:0042803,GO:0050660,GO:1901530;gene=rclA;Parent=GCA000010485_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K21739,RefSeq:WP_001046304.1,SO:0001217,UniParc:UPI00015C4E7B,UniRef:UniRef100_A0A135XXS0,UniRef:UniRef50_P77212,UniRef:UniRef90_P77212
contig_1	Pyrodigal	gene	314931	315785	.	+	.	ID=GCA000010485_00301_gene;locus_tag=GCA000010485_00301;gene=rclR
contig_1	Pyrodigal	CDS	314931	315785	.	+	0	ID=GCA000010485_00301;Name=DNA-binding transcriptional regulator RclR;locus_tag=GCA000010485_00301;product=DNA-binding transcriptional regulator RclR;gene=rclR;Parent=GCA000010485_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000339594,KEGG:K21746,RefSeq:WP_001295801.1,SO:0001217,UniParc:UPI0000E44E97,UniRef:UniRef100_A0A066SXF4,UniRef:UniRef50_P77379,UniRef:UniRef90_A0A066SXF4
contig_1	Pyrodigal	gene	316311	317030	.	+	.	ID=GCA000010485_00302_gene;locus_tag=GCA000010485_00302;gene=ykgE
contig_1	Pyrodigal	CDS	316311	317030	.	+	0	ID=GCA000010485_00302;Name=putative protein YkgE;locus_tag=GCA000010485_00302;product=putative protein YkgE;Dbxref=GO:0004459,GO:0005829;gene=ykgE;Parent=GCA000010485_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0247,KEGG:K18928,RefSeq:WP_001102123.1,SO:0001217,UniParc:UPI00000DE7B1,UniRef:UniRef100_A0A2R9W7T8,UniRef:UniRef50_P77252,UniRef:UniRef90_P77252
contig_1	Pyrodigal	gene	317041	318468	.	+	.	ID=GCA000010485_00303_gene;locus_tag=GCA000010485_00303;gene=ykgF
contig_1	Pyrodigal	CDS	317041	318468	.	+	0	ID=GCA000010485_00303;Name=LutB/LldF family L-lactate oxidation iron-sulfur protein;locus_tag=GCA000010485_00303;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;Dbxref=GO:0004459,GO:0006089,GO:0046872,GO:0051536,GO:0051539,GO:1903457;gene=ykgF;Parent=GCA000010485_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18929,RefSeq:WP_001295802.1,SO:0001217,UniParc:UPI0001C22A3A,UniRef:UniRef100_A0A0J2F955,UniRef:UniRef50_P77536,UniRef:UniRef90_P77536
contig_1	Pyrodigal	gene	318461	319156	.	+	.	ID=GCA000010485_00304_gene;locus_tag=GCA000010485_00304
contig_1	Pyrodigal	CDS	318461	319156	.	+	0	ID=GCA000010485_00304;Name=LUD domain-containing protein;locus_tag=GCA000010485_00304;product=LUD domain-containing protein;Parent=GCA000010485_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295803.1,SO:0001217,UniParc:UPI0001C22A3B,UniRef:UniRef100_A0A066T5C6,UniRef:UniRef50_P77433,UniRef:UniRef90_A0A0H3JBV1
contig_1	Pyrodigal	gene	319399	320067	.	-	.	ID=GCA000010485_00305_gene;locus_tag=GCA000010485_00305
contig_1	Pyrodigal	CDS	319399	320067	.	-	0	ID=GCA000010485_00305;Name=Inner membrane protein;locus_tag=GCA000010485_00305;product=Inner membrane protein;Parent=GCA000010485_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001005267.1,SO:0001217,UniParc:UPI0000DACD2C,UniRef:UniRef100_A0A067HK44,UniRef:UniRef50_P77180,UniRef:UniRef90_A0A0H3EGB8
contig_1	Pyrodigal	gene	320251	322542	.	-	.	ID=GCA000010485_00306_gene;locus_tag=GCA000010485_00306;gene=hyxB
contig_1	Pyrodigal	CDS	320251	322542	.	-	0	ID=GCA000010485_00306;Name=outer membrane autotransporter HyxB;locus_tag=GCA000010485_00306;product=outer membrane autotransporter HyxB;gene=hyxB;Parent=GCA000010485_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000798070,RefSeq:WP_000798071.1,SO:0001217,UniParc:UPI0001C22A3C,UniRef:UniRef100_UPI0001C22A3C,UniRef:UniRef50_A0A0H2V5A3,UniRef:UniRef90_A0A4C7AEJ5
contig_1	Pyrodigal	gene	322584	323345	.	-	.	ID=GCA000010485_00307_gene;locus_tag=GCA000010485_00307;gene=hyxA
contig_1	Pyrodigal	CDS	322584	323345	.	-	0	ID=GCA000010485_00307;Name=protein HyxA;locus_tag=GCA000010485_00307;product=protein HyxA;gene=hyxA;Parent=GCA000010485_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001213047,RefSeq:WP_001524129.1,SO:0001217,UniParc:UPI0001C22A7A,UniRef:UniRef100_A0A3K0P1K3,UniRef:UniRef50_A0A4C7AGD0,UniRef:UniRef90_A0A4C7AGD0
contig_1	Pyrodigal	gene	323362	323502	.	-	.	ID=GCA000010485_00308_gene;locus_tag=GCA000010485_00308
contig_1	Pyrodigal	CDS	323362	323502	.	-	0	ID=GCA000010485_00308;Name=hypothetical protein;locus_tag=GCA000010485_00308;product=hypothetical protein;Parent=GCA000010485_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A1DEDF,UniRef:UniRef100_A0AA36P5P1,UniRef:UniRef50_A0A2X7Y5C3,UniRef:UniRef90_A0A2X7Y5C3
contig_1	Pyrodigal	gene	323499	324293	.	-	.	ID=GCA000010485_00309_gene;locus_tag=GCA000010485_00309;gene=hyxR
contig_1	Pyrodigal	CDS	323499	324293	.	-	0	ID=GCA000010485_00309;Name=LuxR family transcriptional regulator HyxR;locus_tag=GCA000010485_00309;product=LuxR family transcriptional regulator HyxR;gene=hyxR;Parent=GCA000010485_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001304859,RefSeq:WP_001295804.1,SO:0001217,UniParc:UPI0001E8C4B0,UniRef:UniRef100_A0A061KV90,UniRef:UniRef50_A0A0H2V4P2,UniRef:UniRef90_A0A0H2V4P2
contig_1	Pyrodigal	gene	324623	325186	.	-	.	ID=GCA000010485_00310_gene;locus_tag=GCA000010485_00310;gene=ipbA
contig_1	Pyrodigal	CDS	324623	325186	.	-	0	ID=GCA000010485_00310;Name=tyrosine-type DNA invertase IpbA;locus_tag=GCA000010485_00310;product=tyrosine-type DNA invertase IpbA;gene=ipbA;Parent=GCA000010485_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_060710320,KEGG:K07357,RefSeq:WP_001295805.1,SO:0001217,UniParc:UPI00005FEC81,UniRef:UniRef100_I2FKM0,UniRef:UniRef50_A0A0J2EAD2,UniRef:UniRef90_A0A0J2EAD2
contig_1	Pyrodigal	gene	325945	326226	.	+	.	ID=GCA000010485_00311_gene;locus_tag=GCA000010485_00311
contig_1	Pyrodigal	CDS	325945	326226	.	+	0	ID=GCA000010485_00311;Name=hypothetical protein;locus_tag=GCA000010485_00311;product=hypothetical protein;Parent=GCA000010485_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000E44E9A,UniRef:UniRef100_A0A1Y5CTB6,UniRef:UniRef50_Q8X3L5,UniRef:UniRef90_A0A1Y5CTB6
contig_1	Pyrodigal	gene	326268	327938	.	-	.	ID=GCA000010485_00312_gene;locus_tag=GCA000010485_00312;gene=betA
contig_1	Pyrodigal	CDS	326268	327938	.	-	0	ID=GCA000010485_00312;Name=choline dehydrogenase;locus_tag=GCA000010485_00312;product=choline dehydrogenase;Dbxref=GO:0008802,GO:0008812,GO:0016020,GO:0019285,GO:0050660;gene=betA;Parent=GCA000010485_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2303,COG:IR,KEGG:K00108,RefSeq:WP_001159126.1,SO:0001217,UniParc:UPI0001C22A7C,UniRef:UniRef100_A0A0G9FJF4,UniRef:UniRef50_P17444,UniRef:UniRef90_P17444;ec_number=1.1.99.1
contig_1	Pyrodigal	gene	327952	329424	.	-	.	ID=GCA000010485_00313_gene;locus_tag=GCA000010485_00313;gene=betB
contig_1	Pyrodigal	CDS	327952	329424	.	-	0	ID=GCA000010485_00313;Name=betaine-aldehyde dehydrogenase;locus_tag=GCA000010485_00313;product=betaine-aldehyde dehydrogenase;Dbxref=GO:0008802,GO:0019285,GO:0046872;gene=betB;Parent=GCA000010485_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001545821.1,SO:0001217,UniParc:UPI0002A45F48,UniRef:UniRef100_A0A7I0KTH7,UniRef:UniRef50_P17445,UniRef:UniRef90_P17445;ec_number=1.2.1.8
contig_1	Pyrodigal	gene	329438	330025	.	-	.	ID=GCA000010485_00314_gene;locus_tag=GCA000010485_00314;gene=betI
contig_1	Pyrodigal	CDS	329438	330025	.	-	0	ID=GCA000010485_00314;Name=transcriptional regulator BetI;locus_tag=GCA000010485_00314;product=transcriptional regulator BetI;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0019285,GO:0045892;gene=betI;Parent=GCA000010485_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_001545822.1,SO:0001217,UniParc:UPI0001C22A7E,UniRef:UniRef100_A0A7I0KTH2,UniRef:UniRef50_P17446,UniRef:UniRef90_P17446
contig_1	Pyrodigal	gene	330154	332187	.	+	.	ID=GCA000010485_00315_gene;locus_tag=GCA000010485_00315;gene=betT
contig_1	Pyrodigal	CDS	330154	332187	.	+	0	ID=GCA000010485_00315;Name=choline BCCT transporter BetT;locus_tag=GCA000010485_00315;product=choline BCCT transporter BetT;Dbxref=GO:0005886,GO:0006974,GO:0015220,GO:0015871,GO:0019285,GO:0022857;gene=betT;Parent=GCA000010485_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000131044,COG:COG1292,COG:M,KEGG:K02168,RefSeq:WP_000131040.1,SO:0001217,UniParc:UPI00000DE7BC,UniRef:UniRef100_A0A061KVV8,UniRef:UniRef50_P0ABC9,UniRef:UniRef90_P0ABC9
contig_1	Pyrodigal	gene	333065	334153	.	+	.	ID=GCA000010485_00316_gene;locus_tag=GCA000010485_00316;gene=pdeL
contig_1	Pyrodigal	CDS	333065	334153	.	+	0	ID=GCA000010485_00316;Name=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;locus_tag=GCA000010485_00316;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;Dbxref=GO:0000976,GO:0042803,GO:0045893,GO:0046872,GO:0071111;gene=pdeL;Parent=GCA000010485_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001301264,KEGG:K13244,RefSeq:WP_001295808.1,SO:0001217,UniParc:UPI00005EFB69,UniRef:UniRef100_E2QG83,UniRef:UniRef50_P21514,UniRef:UniRef90_P21514;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	334195	335127	.	-	.	ID=GCA000010485_00317_gene;locus_tag=GCA000010485_00317;gene=yahB
contig_1	Pyrodigal	CDS	334195	335127	.	-	0	ID=GCA000010485_00317;Name=putative HTH-type transcriptional regulator YahB;locus_tag=GCA000010485_00317;product=putative HTH-type transcriptional regulator YahB;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=yahB;Parent=GCA000010485_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001084387.1,SO:0001217,UniParc:UPI0001C22A7F,UniRef:UniRef100_A0A7I0L3T6,UniRef:UniRef50_P77700,UniRef:UniRef90_P77700
contig_1	Pyrodigal	gene	335219	335716	.	-	.	ID=GCA000010485_00318_gene;locus_tag=GCA000010485_00318;gene=yahC
contig_1	Pyrodigal	CDS	335219	335716	.	-	0	ID=GCA000010485_00318;Name=putative protein YahC;locus_tag=GCA000010485_00318;product=putative protein YahC;Dbxref=GO:0005886;gene=yahC;Parent=GCA000010485_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001013900.1,SO:0001217,UniParc:UPI0001C22A80,UniRef:UniRef100_A0A7I0KTN9,UniRef:UniRef50_P77219,UniRef:UniRef90_P77219
contig_1	Pyrodigal	gene	335974	336579	.	+	.	ID=GCA000010485_00319_gene;locus_tag=GCA000010485_00319
contig_1	Pyrodigal	CDS	335974	336579	.	+	0	ID=GCA000010485_00319;Name=Ankyrin repeat domain-containing protein;locus_tag=GCA000010485_00319;product=Ankyrin repeat domain-containing protein;Parent=GCA000010485_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000153108.1,SO:0001217,UniParc:UPI0001C22A81,UniRef:UniRef100_A0A641BEZ0,UniRef:UniRef50_A0AAD0DHK6,UniRef:UniRef90_A0A444R1F7
contig_1	Pyrodigal	gene	336619	337482	.	+	.	ID=GCA000010485_00320_gene;locus_tag=GCA000010485_00320;gene=yahE
contig_1	Pyrodigal	CDS	336619	337482	.	+	0	ID=GCA000010485_00320;Name=putative protein YahE;locus_tag=GCA000010485_00320;product=putative protein YahE;gene=yahE;Parent=GCA000010485_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295809.1,SO:0001217,UniParc:UPI0001C22A82,UniRef:UniRef100_A0A066T5D7,UniRef:UniRef50_P77297,UniRef:UniRef90_P77297
contig_1	Pyrodigal	gene	337472	339019	.	+	.	ID=GCA000010485_00321_gene;locus_tag=GCA000010485_00321;gene=yahF
contig_1	Pyrodigal	CDS	337472	339019	.	+	0	ID=GCA000010485_00321;Name=putative protein YahF;locus_tag=GCA000010485_00321;product=putative protein YahF;Dbxref=GO:0004775,GO:0004776,GO:0005829,GO:0006099,GO:0009361;gene=yahF;Parent=GCA000010485_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,KEGG:K02381,RefSeq:WP_000111857.1,SO:0001217,UniParc:UPI0001C22A83,UniRef:UniRef100_A0A066T5M1,UniRef:UniRef50_P77187,UniRef:UniRef90_P77187
contig_1	Pyrodigal	gene	339019	340437	.	+	.	ID=GCA000010485_00322_gene;locus_tag=GCA000010485_00322;gene=yahG
contig_1	Pyrodigal	CDS	339019	340437	.	+	0	ID=GCA000010485_00322;Name=putative protein YahG;locus_tag=GCA000010485_00322;product=putative protein YahG;gene=yahG;Parent=GCA000010485_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000083473.1,SO:0001217,UniParc:UPI0001C22A84,UniRef:UniRef100_A0A061YHM6,UniRef:UniRef50_P77221,UniRef:UniRef90_P77221
contig_1	Pyrodigal	gene	340590	341540	.	+	.	ID=GCA000010485_00323_gene;locus_tag=GCA000010485_00323;gene=yahI
contig_1	Pyrodigal	CDS	340590	341540	.	+	0	ID=GCA000010485_00323;Name=Carbamate kinase-like protein YahI;locus_tag=GCA000010485_00323;product=Carbamate kinase-like protein YahI;Dbxref=GO:0005829,GO:0008804,GO:0019546;gene=yahI;Parent=GCA000010485_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000661637.1,SO:0001217,UniParc:UPI0001C22A85,UniRef:UniRef100_A0A2K1HYT0,UniRef:UniRef50_P77624,UniRef:UniRef90_P77624
contig_1	Pyrodigal	gene	341550	342932	.	+	.	ID=GCA000010485_00324_gene;locus_tag=GCA000010485_00324;gene=yahJ
contig_1	Pyrodigal	CDS	341550	342932	.	+	0	ID=GCA000010485_00324;Name=putative protein YahJ;locus_tag=GCA000010485_00324;product=putative protein YahJ;Dbxref=GO:0016814;gene=yahJ;Parent=GCA000010485_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0402,COG:FR,RefSeq:WP_000662435.1,SO:0001217,UniParc:UPI0001C22A86,UniRef:UniRef100_A0A7I0KTG4,UniRef:UniRef50_P77554,UniRef:UniRef90_P77554
contig_1	Pyrodigal	gene	343309	344358	.	+	.	ID=GCA000010485_00325_gene;locus_tag=GCA000010485_00325;gene=yahK
contig_1	Pyrodigal	CDS	343309	344358	.	+	0	ID=GCA000010485_00325;Name=NADPH-dependent aldehyde reductase YahK;locus_tag=GCA000010485_00325;product=NADPH-dependent aldehyde reductase YahK;Dbxref=GO:0008106,GO:0008270,GO:0016616;gene=yahK;Parent=GCA000010485_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000692754,RefSeq:WP_000692730.1,SO:0001217,UniParc:UPI0001C22A87,UniRef:UniRef100_A0A066T5E1,UniRef:UniRef50_P75691,UniRef:UniRef90_P75691;ec_number=1.1.1.2
contig_1	Pyrodigal	gene	345241	345873	.	-	.	ID=GCA000010485_00326_gene;locus_tag=GCA000010485_00326;gene=yahN
contig_1	Pyrodigal	CDS	345241	345873	.	-	0	ID=GCA000010485_00326;Name=putative membrane protein YahN;locus_tag=GCA000010485_00326;product=putative membrane protein YahN;Dbxref=GO:0005886,GO:0006865,GO:0015171;gene=yahN;Parent=GCA000010485_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295810.1,SO:0001217,UniParc:UPI0001C22A88,UniRef:UniRef100_A0A1U9U0V8,UniRef:UniRef50_P75693,UniRef:UniRef90_P75693
contig_1	Pyrodigal	gene	346059	346334	.	+	.	ID=GCA000010485_00327_gene;locus_tag=GCA000010485_00327;gene=yahO
contig_1	Pyrodigal	CDS	346059	346334	.	+	0	ID=GCA000010485_00327;Name=DUF1471 domain-containing protein;locus_tag=GCA000010485_00327;product=DUF1471 domain-containing protein;gene=yahO;Parent=GCA000010485_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000691951.1,SO:0001217,UniParc:UPI00000E49A2,UniRef:UniRef100_D3Y344,UniRef:UniRef50_B7LMM4,UniRef:UniRef90_B7LMM4
contig_1	Pyrodigal	gene	346435	347556	.	-	.	ID=GCA000010485_00328_gene;locus_tag=GCA000010485_00328;gene=prpR
contig_1	Pyrodigal	CDS	346435	347556	.	-	0	ID=GCA000010485_00328;Name=propionate catabolism operon regulatory protein PrpR;locus_tag=GCA000010485_00328;product=propionate catabolism operon regulatory protein PrpR;Dbxref=GO:0000156,GO:0000160,GO:0003677,GO:0005524,GO:0005737,GO:0006355,GO:0008134,GO:0019629,GO:0043565;gene=prpR;Parent=GCA000010485_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X3KGG9,UniRef:UniRef90_A0A2X3KGG9
contig_1	Pyrodigal	gene	347577	348020	.	-	.	ID=GCA000010485_00329_gene;locus_tag=GCA000010485_00329
contig_1	Pyrodigal	CDS	347577	348020	.	-	0	ID=GCA000010485_00329;Name=Propionate catabolism operon regulatory protein;locus_tag=GCA000010485_00329;product=Propionate catabolism operon regulatory protein;Parent=GCA000010485_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A484W0V2,UniRef:UniRef90_A0A484W0V2
contig_1	Pyrodigal	gene	348259	349149	.	+	.	ID=GCA000010485_00330_gene;locus_tag=GCA000010485_00330;gene=prpB
contig_1	Pyrodigal	CDS	348259	349149	.	+	0	ID=GCA000010485_00330;Name=methylisocitrate lyase;locus_tag=GCA000010485_00330;product=methylisocitrate lyase;Dbxref=GO:0000287,GO:0019629,GO:0046421,GO:0140677;gene=prpB;Parent=GCA000010485_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03417,RefSeq:WP_001128256.1,SO:0001217,UniParc:UPI0001C22A8B,UniRef:UniRef100_A0A7I0KTN1,UniRef:UniRef50_Q56062,UniRef:UniRef90_Q56062;ec_number=4.1.3.30
contig_1	Pyrodigal	gene	349309	350478	.	+	.	ID=GCA000010485_00331_gene;locus_tag=GCA000010485_00331;gene=prpC
contig_1	Pyrodigal	CDS	349309	350478	.	+	0	ID=GCA000010485_00331;Name=2-methylcitrate synthase;locus_tag=GCA000010485_00331;product=2-methylcitrate synthase;Dbxref=GO:0004108,GO:0005737,GO:0005975,GO:0006099,GO:0019679,GO:0036440,GO:0050440;gene=prpC;Parent=GCA000010485_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01659,RefSeq:WP_001285909.1,SO:0001217,UniParc:UPI00005EEABB,UniRef:UniRef100_E2QG97,UniRef:UniRef50_Q56063,UniRef:UniRef90_Q56063;ec_number=2.3.3.5
contig_1	Pyrodigal	gene	350512	351963	.	+	.	ID=GCA000010485_00332_gene;locus_tag=GCA000010485_00332;gene=prpD
contig_1	Pyrodigal	CDS	350512	351963	.	+	0	ID=GCA000010485_00332;Name=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;locus_tag=GCA000010485_00332;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;Dbxref=GO:0003994,GO:0006099,GO:0019679,GO:0047547,GO:0051537;gene=prpD;Parent=GCA000010485_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001272709,KEGG:K01720,RefSeq:WP_001275883.1,SO:0001217,UniParc:UPI0001C22A8C,UniRef:UniRef100_A0A7I0KV00,UniRef:UniRef50_P77243,UniRef:UniRef90_P77243;ec_number=4.2.1.79
contig_1	Pyrodigal	gene	352003	353889	.	+	.	ID=GCA000010485_00333_gene;locus_tag=GCA000010485_00333;gene=prpE
contig_1	Pyrodigal	CDS	352003	353889	.	+	0	ID=GCA000010485_00333;Name=propionate--CoA ligase;locus_tag=GCA000010485_00333;product=propionate--CoA ligase;Dbxref=GO:0005524,GO:0019629,GO:0050218;gene=prpE;Parent=GCA000010485_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01908,RefSeq:WP_000010263.1,SO:0001217,UniParc:UPI0001C22A8D,UniRef:UniRef100_A0A7I0KTF3,UniRef:UniRef50_P55912,UniRef:UniRef90_P77495;ec_number=6.2.1.17
contig_1	Infernal	gene	353889	353965	.	+	.	ID=GCA000010485_00334_gene;locus_tag=GCA000010485_00334;gene=naRNA4
contig_1	Infernal	ncRNA	353889	353965	3.7e-10	+	.	ID=GCA000010485_00334;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00334;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00334_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	353983	354059	.	+	.	ID=GCA000010485_00335_gene;locus_tag=GCA000010485_00335;gene=naRNA4
contig_1	Infernal	ncRNA	353983	354059	8e-10	+	.	ID=GCA000010485_00335;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00335;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00335_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	354214	355473	.	+	.	ID=GCA000010485_00336_gene;locus_tag=GCA000010485_00336;gene=codB
contig_1	Pyrodigal	CDS	354214	355473	.	+	0	ID=GCA000010485_00336;Name=cytosine permease;locus_tag=GCA000010485_00336;product=cytosine permease;Dbxref=GO:0005886,GO:0015209,GO:0015856,GO:0016020,GO:0019858,GO:0055085,GO:1902600;gene=codB;Parent=GCA000010485_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1457,COG:F,KEGG:K10974,RefSeq:WP_000076233.1,SO:0001217,UniParc:UPI0000127E17,UniRef:UniRef100_P0AA82,UniRef:UniRef50_P0AA82,UniRef:UniRef90_P0AA82
contig_1	Pyrodigal	gene	355463	356746	.	+	.	ID=GCA000010485_00337_gene;locus_tag=GCA000010485_00337;gene=codA
contig_1	Pyrodigal	CDS	355463	356746	.	+	0	ID=GCA000010485_00337;Name=cytosine/isoguanine deaminase;locus_tag=GCA000010485_00337;product=cytosine/isoguanine deaminase;Dbxref=GO:0004131,GO:0005829,GO:0006209,GO:0008198,GO:0008270,GO:0035888,GO:0042802;gene=codA;Parent=GCA000010485_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001301240,RefSeq:WP_001295811.1,SO:0001217,UniParc:UPI0001C22A8E,UniRef:UniRef100_A0A066T183,UniRef:UniRef50_P25524,UniRef:UniRef90_P25524;ec_number=3.5.4.1
contig_1	Pyrodigal	gene	356867	357487	.	-	.	ID=GCA000010485_00338_gene;locus_tag=GCA000010485_00338;gene=lacA
contig_1	Pyrodigal	CDS	356867	357487	.	-	0	ID=GCA000010485_00338;Name=galactoside O-acetyltransferase;locus_tag=GCA000010485_00338;product=galactoside O-acetyltransferase;Dbxref=GO:0005737,GO:0005989,GO:0008870,GO:0042802;gene=lacA;Parent=GCA000010485_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00661,SO:0001217,UniRef:UniRef50_P07464,UniRef:UniRef90_P07464;ec_number=2.3.1.18
contig_1	Pyrodigal	gene	357544	358797	.	-	.	ID=GCA000010485_00339_gene;locus_tag=GCA000010485_00339;gene=lacY
contig_1	Pyrodigal	CDS	357544	358797	.	-	0	ID=GCA000010485_00339;Name=lactose permease;locus_tag=GCA000010485_00339;product=lactose permease;Dbxref=GO:0005351,GO:0005886,GO:0008643,GO:0015528,GO:0015767,GO:0016020,GO:0030395;gene=lacY;Parent=GCA000010485_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000291549,KEGG:K02532,RefSeq:WP_000291538.1,SO:0001217,UniParc:UPI0001C22A90,UniRef:UniRef100_A0A641E4A9,UniRef:UniRef50_P02920,UniRef:UniRef90_P02920
contig_1	Pyrodigal	gene	358849	361923	.	-	.	ID=GCA000010485_00340_gene;locus_tag=GCA000010485_00340;gene=lacZ
contig_1	Pyrodigal	CDS	358849	361923	.	-	0	ID=GCA000010485_00340;Name=beta-galactosidase;locus_tag=GCA000010485_00340;product=beta-galactosidase;gene=lacZ;Parent=GCA000010485_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000177906,RefSeq:WP_000177885.1,SO:0001217,UniParc:UPI0001C22A91,UniRef:UniRef100_A0A7I0KTE2,UniRef:UniRef90_P00722;ec_number=3.2.1.23
contig_1	Pyrodigal	gene	362046	363137	.	-	.	ID=GCA000010485_00341_gene;locus_tag=GCA000010485_00341;gene=lacI
contig_1	Pyrodigal	CDS	362046	363137	.	-	0	ID=GCA000010485_00341;Name=DNA-binding transcriptional repressor LacI;locus_tag=GCA000010485_00341;product=DNA-binding transcriptional repressor LacI;Dbxref=GO:0000976,GO:0000987,GO:0001217,GO:0003700,GO:0005829,GO:0006355,GO:0042802,GO:0045892;gene=lacI;Parent=GCA000010485_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000805902,COG:COG1609,COG:K,KEGG:K27069,SO:0001217,UniParc:UPI00019F36AF,UniRef:UniRef100_A0A376DEC2,UniRef:UniRef50_P03023,UniRef:UniRef90_P03023
contig_1	Pyrodigal	gene	363205	364038	.	-	.	ID=GCA000010485_00342_gene;locus_tag=GCA000010485_00342;gene=mhpR
contig_1	Pyrodigal	CDS	363205	364038	.	-	0	ID=GCA000010485_00342;Name=DNA-binding transcriptional regulator;locus_tag=GCA000010485_00342;product=DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0009056,GO:0045892;gene=mhpR;Parent=GCA000010485_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295813.1,SO:0001217,UniParc:UPI0002A1F0EB,UniRef:UniRef100_A0A061YA74,UniRef:UniRef50_P77569,UniRef:UniRef90_P77569
contig_1	Pyrodigal	gene	364229	365893	.	+	.	ID=GCA000010485_00343_gene;locus_tag=GCA000010485_00343;gene=mhpA
contig_1	Pyrodigal	CDS	364229	365893	.	+	0	ID=GCA000010485_00343;Name=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;locus_tag=GCA000010485_00343;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;Dbxref=GO:0008688,GO:0019380,GO:0019622,GO:0071949;gene=mhpA;Parent=GCA000010485_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05712,RefSeq:WP_001007420.1,SO:0001217,UniParc:UPI00016A0E6B,UniRef:UniRef100_B7N8Q4,UniRef:UniRef50_P77397,UniRef:UniRef90_B7NK08;ec_number=1.14.13.127
contig_1	Pyrodigal	gene	365895	366839	.	+	.	ID=GCA000010485_00344_gene;locus_tag=GCA000010485_00344;gene=mhpB
contig_1	Pyrodigal	CDS	365895	366839	.	+	0	ID=GCA000010485_00344;Name=3-carboxyethylcatechol 2%2C3-dioxygenase;locus_tag=GCA000010485_00344;product=3-carboxyethylcatechol 2%2C3-dioxygenase;Dbxref=GO:0008198,GO:0009056,GO:0019380,GO:0047070;gene=mhpB;Parent=GCA000010485_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000543457.1,SO:0001217,UniParc:UPI000012F09E,UniRef:UniRef100_P0ABR9,UniRef:UniRef50_P0ABR9,UniRef:UniRef90_P0ABR9;ec_number=1.13.11.16
contig_1	Pyrodigal	gene	366857	367723	.	+	.	ID=GCA000010485_00345_gene;locus_tag=GCA000010485_00345;gene=mhpC
contig_1	Pyrodigal	CDS	366857	367723	.	+	0	ID=GCA000010485_00345;Name=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;locus_tag=GCA000010485_00345;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;Dbxref=GO:0005737,GO:0018771,GO:0019380,GO:0042803,GO:0052823;gene=mhpC;Parent=GCA000010485_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000121907,RefSeq:WP_000121891.1,SO:0001217,UniParc:UPI0002A3C497,UniRef:UniRef100_A0A7I0L1E9,UniRef:UniRef50_P77044,UniRef:UniRef90_P77044;ec_number=3.7.1.14
contig_1	Pyrodigal	gene	367733	368542	.	+	.	ID=GCA000010485_00346_gene;locus_tag=GCA000010485_00346;gene=mhpD
contig_1	Pyrodigal	CDS	367733	368542	.	+	0	ID=GCA000010485_00346;Name=2-keto-4-pentenoate hydratase;locus_tag=GCA000010485_00346;product=2-keto-4-pentenoate hydratase;Dbxref=GO:0005737,GO:0008684,GO:0009056,GO:0019380,GO:0030145;gene=mhpD;Parent=GCA000010485_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000160712.1,SO:0001217,UniParc:UPI00016A0E6C,UniRef:UniRef100_B7NK05,UniRef:UniRef50_P77608,UniRef:UniRef90_P77608;ec_number=4.2.1.80
contig_1	Pyrodigal	gene	368539	369489	.	+	.	ID=GCA000010485_00347_gene;locus_tag=GCA000010485_00347;gene=mhpF
contig_1	Pyrodigal	CDS	368539	369489	.	+	0	ID=GCA000010485_00347;Name=acetaldehyde dehydrogenase;locus_tag=GCA000010485_00347;product=acetaldehyde dehydrogenase;Dbxref=GO:0008774,GO:0009056,GO:0019380,GO:0051287;gene=mhpF;Parent=GCA000010485_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000044314,KEGG:K04073,RefSeq:WP_000044319.1,SO:0001217,UniParc:UPI0001C22AC8,UniRef:UniRef100_A0A066T191,UniRef:UniRef50_Q52060,UniRef:UniRef90_P77580;ec_number=1.2.1.10
contig_1	Pyrodigal	gene	369486	370499	.	+	.	ID=GCA000010485_00348_gene;locus_tag=GCA000010485_00348;gene=dmpG
contig_1	Pyrodigal	CDS	369486	370499	.	+	0	ID=GCA000010485_00348;Name=4-hydroxy-2-oxovalerate aldolase;locus_tag=GCA000010485_00348;product=4-hydroxy-2-oxovalerate aldolase;Dbxref=GO:0003852,GO:0008701,GO:0009056,GO:0009098,GO:0019380,GO:0030145;gene=dmpG;Parent=GCA000010485_00348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01666,RefSeq:WP_001013509.1,SO:0001217,UniParc:UPI0001C22AC9,UniRef:UniRef100_A0A7I0KTD9,UniRef:UniRef50_P51016,UniRef:UniRef90_Q8X5J8;ec_number=4.1.3.39
contig_1	Pyrodigal	gene	370675	371886	.	+	.	ID=GCA000010485_00349_gene;locus_tag=GCA000010485_00349;gene=mhpT
contig_1	Pyrodigal	CDS	370675	371886	.	+	0	ID=GCA000010485_00349;Name=3-(3-hydroxy-phenyl)propionate transporter MhpT;locus_tag=GCA000010485_00349;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;Dbxref=GO:0016020,GO:0022857,GO:0055085;gene=mhpT;Parent=GCA000010485_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000107631.1,SO:0001217,UniParc:UPI0001E8CAC2,UniRef:UniRef100_A0A061KT52,UniRef:UniRef50_A0A0C7KG31,UniRef:UniRef90_A0A241QWA1
contig_1	Pyrodigal	gene	371988	372527	.	+	.	ID=GCA000010485_00350_gene;locus_tag=GCA000010485_00350;gene=yaiL
contig_1	Pyrodigal	CDS	371988	372527	.	+	0	ID=GCA000010485_00350;Name=putative protein YaiL;locus_tag=GCA000010485_00350;product=putative protein YaiL;Dbxref=GO:0005829;gene=yaiL;Parent=GCA000010485_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09912,RefSeq:WP_001096710.1,SO:0001217,UniParc:UPI00005EFDC3,UniRef:UniRef100_A0A066SXJ0,UniRef:UniRef50_P51024,UniRef:UniRef90_P51024
contig_1	Pyrodigal	gene	372652	373485	.	-	.	ID=GCA000010485_00351_gene;locus_tag=GCA000010485_00351;gene=fghA
contig_1	Pyrodigal	CDS	372652	373485	.	-	0	ID=GCA000010485_00351;Name=S-formylglutathione hydrolase;locus_tag=GCA000010485_00351;product=S-formylglutathione hydrolase;Dbxref=GO:0005829,GO:0018738,GO:0046294,GO:0052689;gene=fghA;Parent=GCA000010485_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01070,RefSeq:WP_000419064.1,SO:0001217,UniParc:UPI0001C22ACB,UniRef:UniRef100_A0A066SX59,UniRef:UniRef50_P51025,UniRef:UniRef90_P51025;ec_number=3.1.2.12
contig_1	Pyrodigal	gene	373578	374687	.	-	.	ID=GCA000010485_00352_gene;locus_tag=GCA000010485_00352;gene=frmA
contig_1	Pyrodigal	CDS	373578	374687	.	-	0	ID=GCA000010485_00352;Name=S-(hydroxymethyl)glutathione dehydrogenase;locus_tag=GCA000010485_00352;product=S-(hydroxymethyl)glutathione dehydrogenase;Dbxref=GO:0004022,GO:0005829,GO:0008270,GO:0046294,GO:0051903,GO:0080007,GO:0106321,GO:0106322;gene=frmA;Parent=GCA000010485_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000842106,COG:C,COG:COG1062,RefSeq:WP_000842109.1,SO:0001217,UniParc:UPI00005EFDC1,UniRef:UniRef100_A1A835,UniRef:UniRef50_P25437,UniRef:UniRef90_P25437;ec_number=1.1.1.284
contig_1	Pyrodigal	gene	374722	374997	.	-	.	ID=GCA000010485_00353_gene;locus_tag=GCA000010485_00353;gene=frmR
contig_1	Pyrodigal	CDS	374722	374997	.	-	0	ID=GCA000010485_00353;Name=formaldehyde-responsive transcriptional repressor FrmR;locus_tag=GCA000010485_00353;product=formaldehyde-responsive transcriptional repressor FrmR;Dbxref=GO:0003677,GO:0005737,GO:0045892,GO:0046872;gene=frmR;Parent=GCA000010485_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23239,RefSeq:WP_001141271.1,SO:0001217,UniParc:UPI000013A0D9,UniRef:UniRef100_P0AAP3,UniRef:UniRef50_P0AAP3,UniRef:UniRef90_P0AAP3
contig_1	Pyrodigal	gene	375303	376265	.	+	.	ID=GCA000010485_00354_gene;locus_tag=GCA000010485_00354;gene=tauA
contig_1	Pyrodigal	CDS	375303	376265	.	+	0	ID=GCA000010485_00354;Name=taurine ABC transporter substrate-binding protein;locus_tag=GCA000010485_00354;product=taurine ABC transporter substrate-binding protein;Dbxref=GO:0009970,GO:0010438,GO:0015411,GO:0015734,GO:0016020,GO:0022857,GO:0030288,GO:0042597,GO:0043190,GO:0055052,GO:0055085;gene=tauA;Parent=GCA000010485_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4521,COG:P,KEGG:K15551,RefSeq:WP_001018403.1,SO:0001217,UniParc:UPI0001C22ACC,UniRef:UniRef100_A0A061YGG9,UniRef:UniRef50_Q47537,UniRef:UniRef90_Q47537;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	376278	377045	.	+	.	ID=GCA000010485_00355_gene;locus_tag=GCA000010485_00355;gene=tauB
contig_1	Pyrodigal	CDS	376278	377045	.	+	0	ID=GCA000010485_00355;Name=taurine ABC transporter ATP-binding subunit;locus_tag=GCA000010485_00355;product=taurine ABC transporter ATP-binding subunit;Dbxref=GO:0005524,GO:0005886,GO:0015411,GO:0016020,GO:0016887;gene=tauB;Parent=GCA000010485_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4525,COG:P,RefSeq:WP_000939359.1,SO:0001217,UniParc:UPI00005EFB34,UniRef:UniRef100_Q0TKS1,UniRef:UniRef50_Q47538,UniRef:UniRef90_Q47538;ec_number=7.6.2.7
contig_1	Pyrodigal	gene	377042	377869	.	+	.	ID=GCA000010485_00356_gene;locus_tag=GCA000010485_00356;gene=tauC
contig_1	Pyrodigal	CDS	377042	377869	.	+	0	ID=GCA000010485_00356;Name=taurine ABC transporter permease TauC;locus_tag=GCA000010485_00356;product=taurine ABC transporter permease TauC;Dbxref=GO:0015411,GO:0016020,GO:0055085;gene=tauC;Parent=GCA000010485_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,RefSeq:WP_000114579.1,SO:0001217,UniParc:UPI00005EFB35,UniRef:UniRef100_A0A023KUF2,UniRef:UniRef50_W9BDL7,UniRef:UniRef90_W9BDL7;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	377866	378717	.	+	.	ID=GCA000010485_00357_gene;locus_tag=GCA000010485_00357;gene=tauD
contig_1	Pyrodigal	CDS	377866	378717	.	+	0	ID=GCA000010485_00357;Name=taurine dioxygenase;locus_tag=GCA000010485_00357;product=taurine dioxygenase;Dbxref=GO:0000908,GO:0005737,GO:0006790,GO:0008198,GO:0016491,GO:0019529,GO:0031418,GO:0042802,GO:0051289,GO:1990205;gene=tauD;Parent=GCA000010485_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2175,COG:Q,RefSeq:WP_000004069.1,SO:0001217,UniParc:UPI000187B8C0,UniRef:UniRef100_A0A061KV30,UniRef:UniRef50_P37610,UniRef:UniRef90_P37610;ec_number=1.14.11.17
contig_1	Pyrodigal	gene	378757	379731	.	-	.	ID=GCA000010485_00358_gene;locus_tag=GCA000010485_00358;gene=hemB
contig_1	Pyrodigal	CDS	378757	379731	.	-	0	ID=GCA000010485_00358;Name=porphobilinogen synthase;locus_tag=GCA000010485_00358;product=porphobilinogen synthase;Dbxref=GO:0004655,GO:0005829,GO:0006782,GO:0008270,GO:0033014;gene=hemB;Parent=GCA000010485_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0113,COG:H,KEGG:K01698,RefSeq:WP_001295337.1,SO:0001217,UniParc:UPI000016F200,UniRef:UniRef100_P0ACB2,UniRef:UniRef50_P0ACB2,UniRef:UniRef90_P0ACB2;ec_number=4.2.1.24
contig_1	Pyrodigal	gene	380257	383244	.	+	.	ID=GCA000010485_00359_gene;locus_tag=GCA000010485_00359
contig_1	Pyrodigal	CDS	380257	383244	.	+	0	ID=GCA000010485_00359;Name=Autotransporter outer membrane beta-barrel domain-containing protein;locus_tag=GCA000010485_00359;product=Autotransporter outer membrane beta-barrel domain-containing protein;Parent=GCA000010485_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000556411.1,SO:0001217,UniParc:UPI0001C22ACD,UniRef:UniRef100_A0A0C5EW99,UniRef:UniRef50_P77199,UniRef:UniRef90_A0A2J1ANS6
contig_1	Pyrodigal	gene	383330	383953	.	+	.	ID=GCA000010485_00360_gene;locus_tag=GCA000010485_00360;gene=iprA
contig_1	Pyrodigal	CDS	383330	383953	.	+	0	ID=GCA000010485_00360;Name=hydrogen peroxide resistance inhibitor IprA;locus_tag=GCA000010485_00360;product=hydrogen peroxide resistance inhibitor IprA;Dbxref=GO:0006979;gene=iprA;Parent=GCA000010485_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295817.1,SO:0001217,UniParc:UPI0000F0A925,UniRef:UniRef100_A0A148HQ93,UniRef:UniRef50_Q8ZRF7,UniRef:UniRef90_P0AAP5
contig_1	Pyrodigal	gene	383954	385111	.	-	.	ID=GCA000010485_00361_gene;locus_tag=GCA000010485_00361;gene=ampH
contig_1	Pyrodigal	CDS	383954	385111	.	-	0	ID=GCA000010485_00361;Name=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;locus_tag=GCA000010485_00361;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;Dbxref=GO:0004175,GO:0004180,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0009253,GO:0071555;gene=ampH;Parent=GCA000010485_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1680,COG:V,RefSeq:WP_000830769.1,SO:0001217,UniParc:UPI0001C22ACE,UniRef:UniRef100_A0A061YL94,UniRef:UniRef50_P0AD70,UniRef:UniRef90_P0AD70;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	385463	386683	.	+	.	ID=GCA000010485_00362_gene;locus_tag=GCA000010485_00362;gene=sbmA
contig_1	Pyrodigal	CDS	385463	386683	.	+	0	ID=GCA000010485_00362;Name=peptide antibiotic transporter SbmA;locus_tag=GCA000010485_00362;product=peptide antibiotic transporter SbmA;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015291,GO:0015638,GO:0015833,GO:0042803,GO:0042884,GO:0042885,GO:0046677,GO:1904680;gene=sbmA;Parent=GCA000010485_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1133,COG:V,KEGG:K17938,RefSeq:WP_001385225.1,SO:0001217,UniParc:UPI0001C22AD0,UniRef:UniRef100_A0A061YN27,UniRef:UniRef50_P0AFY6,UniRef:UniRef90_P0AFY6
contig_1	Pyrodigal	gene	386696	387790	.	+	.	ID=GCA000010485_00363_gene;locus_tag=GCA000010485_00363;gene=yaiW
contig_1	Pyrodigal	CDS	386696	387790	.	+	0	ID=GCA000010485_00363;Name=surface-exposed outer membrane lipoprotein YaiW;locus_tag=GCA000010485_00363;product=surface-exposed outer membrane lipoprotein YaiW;Dbxref=GO:0005829,GO:0031240,GO:1901652;gene=yaiW;Parent=GCA000010485_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000092067,BlastRules:WP_001271421,RefSeq:WP_000092069.1,SO:0001217,UniParc:UPI00000DE7E4,UniRef:UniRef100_W8STI4,UniRef:UniRef50_P77562,UniRef:UniRef90_P77562
contig_1	Pyrodigal	gene	387849	388157	.	-	.	ID=GCA000010485_00364_gene;locus_tag=GCA000010485_00364;gene=yaiY
contig_1	Pyrodigal	CDS	387849	388157	.	-	0	ID=GCA000010485_00364;Name=Inner membrane protein YaiY;locus_tag=GCA000010485_00364;product=Inner membrane protein YaiY;Dbxref=GO:0005886;gene=yaiY;Parent=GCA000010485_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000763151.1,SO:0001217,UniParc:UPI000013A0DE,UniRef:UniRef100_P0AAP7,UniRef:UniRef50_P0AAP7,UniRef:UniRef90_P0AAP7
contig_1	Pyrodigal	gene	388417	388629	.	+	.	ID=GCA000010485_00365_gene;locus_tag=GCA000010485_00365;gene=yaiZ
contig_1	Pyrodigal	CDS	388417	388629	.	+	0	ID=GCA000010485_00365;Name=putative protein YaiZ;locus_tag=GCA000010485_00365;product=putative protein YaiZ;Dbxref=GO:0005886;gene=yaiZ;Parent=GCA000010485_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295334.1,SO:0001217,UniParc:UPI000013A0DF,UniRef:UniRef100_P0AAQ0,UniRef:UniRef50_P0AAQ0,UniRef:UniRef90_P0AAQ0
contig_1	Pyrodigal	gene	388653	389747	.	-	.	ID=GCA000010485_00366_gene;locus_tag=GCA000010485_00366;gene=ddlA
contig_1	Pyrodigal	CDS	388653	389747	.	-	0	ID=GCA000010485_00366;Name=D-alanine--D-alanine ligase;locus_tag=GCA000010485_00366;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddlA;Parent=GCA000010485_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_000413686.1,SO:0001217,UniParc:UPI0001B633CA,UniRef:UniRef100_A0A066T5I0,UniRef:UniRef50_P0A6J8,UniRef:UniRef90_P0A6J8;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	390210	390470	.	+	.	ID=GCA000010485_00367_gene;locus_tag=GCA000010485_00367;gene=iraP
contig_1	Pyrodigal	CDS	390210	390470	.	+	0	ID=GCA000010485_00367;Name=anti-adapter protein IraP;locus_tag=GCA000010485_00367;product=anti-adapter protein IraP;Dbxref=GO:0005737,GO:0009267;gene=iraP;Parent=GCA000010485_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000792973.1,SO:0001217,UniParc:UPI00000DE7E7,UniRef:UniRef100_B7UJK6,UniRef:UniRef50_P0AAN9,UniRef:UniRef90_P0AAN9
contig_1	Pyrodigal	gene	390571	391986	.	+	.	ID=GCA000010485_00368_gene;locus_tag=GCA000010485_00368;gene=phoA
contig_1	Pyrodigal	CDS	390571	391986	.	+	0	ID=GCA000010485_00368;Name=alkaline phosphatase;locus_tag=GCA000010485_00368;product=alkaline phosphatase;Dbxref=GO:0004035,GO:0016791,GO:0042597,GO:0046872;gene=phoA;Parent=GCA000010485_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295821.1,SO:0001217,UniParc:UPI00018871D5,UniRef:UniRef100_A0A061KVQ2,UniRef:UniRef50_P00634,UniRef:UniRef90_P00634;ec_number=3.1.3.1
contig_1	Pyrodigal	gene	392105	392425	.	+	.	ID=GCA000010485_00369_gene;locus_tag=GCA000010485_00369;gene=psiF
contig_1	Pyrodigal	CDS	392105	392425	.	+	0	ID=GCA000010485_00369;Name=phosphate starvation-inducible protein PsiF;locus_tag=GCA000010485_00369;product=phosphate starvation-inducible protein PsiF;gene=psiF;Parent=GCA000010485_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295332.1,SO:0001217,UniParc:UPI00001327AE,UniRef:UniRef100_P0AFM4,UniRef:UniRef50_P0AFM4,UniRef:UniRef90_P0AFM4
contig_1	Pyrodigal	gene	392527	393642	.	+	.	ID=GCA000010485_00370_gene;locus_tag=GCA000010485_00370;gene=adrA
contig_1	Pyrodigal	CDS	392527	393642	.	+	0	ID=GCA000010485_00370;Name=diguanylate cyclase AdrA;locus_tag=GCA000010485_00370;product=diguanylate cyclase AdrA;Dbxref=GO:0005525,GO:0005886,GO:0042802,GO:0043709,GO:0046872,GO:0052621,GO:1902201,GO:2001008;gene=adrA;Parent=GCA000010485_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2199,COG:T,RefSeq:WP_000484048.1,SO:0001217,UniParc:UPI0000047CB7,UniRef:UniRef100_P0AAP1,UniRef:UniRef50_P0AAP1,UniRef:UniRef90_P0AAP1;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	393659	394468	.	-	.	ID=GCA000010485_00371_gene;locus_tag=GCA000010485_00371;gene=proC
contig_1	Pyrodigal	CDS	393659	394468	.	-	0	ID=GCA000010485_00371;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000010485_00371;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0004735,GO:0006561;gene=proC;Parent=GCA000010485_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0345,COG:E,KEGG:K00286,RefSeq:WP_001295822.1,SO:0001217,UniParc:UPI0001C22AD2,UniRef:UniRef100_A0A061KQD0,UniRef:UniRef50_P0A9L8,UniRef:UniRef90_A0A1Y6GSY8;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	394588	395046	.	+	.	ID=GCA000010485_00372_gene;locus_tag=GCA000010485_00372;gene=yaiI
contig_1	Pyrodigal	CDS	394588	395046	.	+	0	ID=GCA000010485_00372;Name=YaiI/YqxD family protein;locus_tag=GCA000010485_00372;product=YaiI/YqxD family protein;gene=yaiI;Parent=GCA000010485_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1671,COG:S,KEGG:K09768,RefSeq:WP_000158159.1,SO:0001217,UniParc:UPI000013A0D6,UniRef:UniRef100_P0A8D3,UniRef:UniRef50_P0A8D3,UniRef:UniRef90_P0A8D3
contig_1	Pyrodigal	gene	395229	395753	.	+	.	ID=GCA000010485_00373_gene;locus_tag=GCA000010485_00373;gene=aroL
contig_1	Pyrodigal	CDS	395229	395753	.	+	0	ID=GCA000010485_00373;Name=shikimate kinase AroL;locus_tag=GCA000010485_00373;product=shikimate kinase AroL;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroL;Parent=GCA000010485_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193393.1,SO:0001217,UniParc:UPI000012602F,UniRef:UniRef100_P0A6E1,UniRef:UniRef50_P0A6E1,UniRef:UniRef90_P0A6E1;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	395803	395994	.	+	.	ID=GCA000010485_00374_gene;locus_tag=GCA000010485_00374;gene=yaiA
contig_1	Pyrodigal	CDS	395803	395994	.	+	0	ID=GCA000010485_00374;Name=putative protein YaiA;locus_tag=GCA000010485_00374;product=putative protein YaiA;gene=yaiA;Parent=GCA000010485_00374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001142439.1,SO:0001217,UniParc:UPI000013A0CF,UniRef:UniRef100_P0AAN5,UniRef:UniRef50_P0AAN5,UniRef:UniRef90_P0AAN5
contig_1	Pyrodigal	gene	396252	396929	.	+	.	ID=GCA000010485_00375_gene;locus_tag=GCA000010485_00375;gene=aroM
contig_1	Pyrodigal	CDS	396252	396929	.	+	0	ID=GCA000010485_00375;Name=Protein AroM;locus_tag=GCA000010485_00375;product=Protein AroM;Dbxref=GO:0016855;gene=aroM;Parent=GCA000010485_00375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001276402.1,SO:0001217,UniParc:UPI00000DE7EA,UniRef:UniRef100_A0A061K1N3,UniRef:UniRef50_P0AE28,UniRef:UniRef90_P0AE28
contig_1	Pyrodigal	gene	397001	397285	.	+	.	ID=GCA000010485_00376_gene;locus_tag=GCA000010485_00376;gene=ppnP
contig_1	Pyrodigal	CDS	397001	397285	.	+	0	ID=GCA000010485_00376;Name=pyrimidine/purine nucleoside phosphorylase;locus_tag=GCA000010485_00376;product=pyrimidine/purine nucleoside phosphorylase;Dbxref=GO:0004731,GO:0004850,GO:0005829,GO:0009032,GO:0047847,GO:0047975;gene=ppnP;Parent=GCA000010485_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3123,COG:F,RefSeq:WP_000941942.1,SO:0001217,UniParc:UPI000013A0D3,UniRef:UniRef100_P0C037,UniRef:UniRef50_P0C037,UniRef:UniRef90_P0C037;ec_number=2.4.2.2
contig_1	Pyrodigal	gene	397389	397571	.	-	.	ID=GCA000010485_00377_gene;locus_tag=GCA000010485_00377
contig_1	Pyrodigal	CDS	397389	397571	.	-	0	ID=GCA000010485_00377;Name=hypothetical protein;locus_tag=GCA000010485_00377;product=hypothetical protein;Parent=GCA000010485_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0K4C8M6,UniRef:UniRef90_A0A2X1MIR8
contig_1	Pyrodigal	gene	397932	398909	.	-	.	ID=GCA000010485_00378_gene;locus_tag=GCA000010485_00378;gene=rdgC
contig_1	Pyrodigal	CDS	397932	398909	.	-	0	ID=GCA000010485_00378;Name=Recombination-associated protein RdgC;locus_tag=GCA000010485_00378;product=Recombination-associated protein RdgC;gene=rdgC;Parent=GCA000010485_00378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P36767
contig_1	Pyrodigal	gene	398968	399876	.	+	.	ID=GCA000010485_00379_gene;locus_tag=GCA000010485_00379;gene=mak
contig_1	Pyrodigal	CDS	398968	399876	.	+	0	ID=GCA000010485_00379;Name=fructokinase;locus_tag=GCA000010485_00379;product=fructokinase;gene=mak;Parent=GCA000010485_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_001219313.1,SO:0001217,UniParc:UPI000187B8C8,UniRef:UniRef100_A0A066T5J4,UniRef:UniRef50_P23917,UniRef:UniRef90_A0A067HUL3;ec_number=2.7.1.4
contig_1	Pyrodigal	gene	400145	401413	.	-	.	ID=GCA000010485_00380_gene;locus_tag=GCA000010485_00380;gene=araJ
contig_1	Pyrodigal	CDS	400145	401413	.	-	0	ID=GCA000010485_00380;Name=MFS transporter AraJ;locus_tag=GCA000010485_00380;product=MFS transporter AraJ;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=araJ;Parent=GCA000010485_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08156,SO:0001217,UniParc:UPI000218598F,UniRef:UniRef100_A0A0C5F788,UniRef:UniRef50_P23910,UniRef:UniRef90_P23910
contig_1	Pyrodigal	gene	401455	404598	.	-	.	ID=GCA000010485_00381_gene;locus_tag=GCA000010485_00381;gene=sbcC
contig_1	Pyrodigal	CDS	401455	404598	.	-	0	ID=GCA000010485_00381;Name=exonuclease subunit SbcC;locus_tag=GCA000010485_00381;product=exonuclease subunit SbcC;Dbxref=GO:0000014,GO:0004527,GO:0004529,GO:0005524,GO:0006260,GO:0006274,GO:0006281,GO:0006302,GO:0006310,GO:0008296,GO:0016887,GO:1990238,GO:1990391;gene=sbcC;Parent=GCA000010485_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0419,COG:L,RefSeq:WP_000698843.1,SO:0001217,UniParc:UPI0001C22B0C,UniRef:UniRef100_A0A066SX83,UniRef:UniRef50_P13458,UniRef:UniRef90_P13458;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	404595	405797	.	-	.	ID=GCA000010485_00382_gene;locus_tag=GCA000010485_00382;gene=sbcD
contig_1	Pyrodigal	CDS	404595	405797	.	-	0	ID=GCA000010485_00382;Name=exonuclease subunit SbcD;locus_tag=GCA000010485_00382;product=exonuclease subunit SbcD;Dbxref=GO:0000014,GO:0003677,GO:0004527,GO:0004529,GO:0006260,GO:0006274,GO:0006281,GO:0006310,GO:0008408,GO:1990238,GO:1990391;gene=sbcD;Parent=GCA000010485_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001221274.1,SO:0001217,UniParc:UPI0001C22B0D,UniRef:UniRef100_A0A061YN48,UniRef:UniRef50_P0AG76,UniRef:UniRef90_P0AG76;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	405987	406676	.	+	.	ID=GCA000010485_00383_gene;locus_tag=GCA000010485_00383;gene=phoB
contig_1	Pyrodigal	CDS	405987	406676	.	+	0	ID=GCA000010485_00383;Name=phosphate response regulator transcription factor PhoB;locus_tag=GCA000010485_00383;product=phosphate response regulator transcription factor PhoB;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0006817,GO:0032993;gene=phoB;Parent=GCA000010485_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000113933.1,SO:0001217,UniParc:UPI000011F516,UniRef:UniRef100_P0AFJ5,UniRef:UniRef50_P0AFJ5,UniRef:UniRef90_P0AFJ5
contig_1	Pyrodigal	gene	406734	408029	.	+	.	ID=GCA000010485_00384_gene;locus_tag=GCA000010485_00384;gene=phoR
contig_1	Pyrodigal	CDS	406734	408029	.	+	0	ID=GCA000010485_00384;Name=phosphate regulon sensor histidine kinase PhoR;locus_tag=GCA000010485_00384;product=phosphate regulon sensor histidine kinase PhoR;Dbxref=GO:0000155,GO:0000160,GO:0004721,GO:0005524,GO:0005886,GO:0006355,GO:0006817,GO:0016020,GO:0016036,GO:0016310;gene=phoR;Parent=GCA000010485_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000893576.1,SO:0001217,UniParc:UPI0001C22B0E,UniRef:UniRef100_A0A066SXM0,UniRef:UniRef50_P08400,UniRef:UniRef90_P08400;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	408436	409755	.	+	.	ID=GCA000010485_00385_gene;locus_tag=GCA000010485_00385;gene=brnQ
contig_1	Pyrodigal	CDS	408436	409755	.	+	0	ID=GCA000010485_00385;Name=branched-chain amino acid transporter carrier protein BrnQ;locus_tag=GCA000010485_00385;product=branched-chain amino acid transporter carrier protein BrnQ;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015803,GO:0015818,GO:0015820,GO:0015829;gene=brnQ;Parent=GCA000010485_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_000149635.1,SO:0001217,UniParc:UPI00000DE7F3,UniRef:UniRef100_E2QGE5,UniRef:UniRef50_P0AD99,UniRef:UniRef90_P0AD99
contig_1	Pyrodigal	gene	409831	411204	.	+	.	ID=GCA000010485_00386_gene;locus_tag=GCA000010485_00386;gene=proY
contig_1	Pyrodigal	CDS	409831	411204	.	+	0	ID=GCA000010485_00386;Name=proline-specific permease ProY;locus_tag=GCA000010485_00386;product=proline-specific permease ProY;Dbxref=GO:0003333,GO:0005886,GO:0006865,GO:0015171,GO:0016020,GO:0055085;gene=proY;Parent=GCA000010485_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_001295329.1,SO:0001217,UniParc:UPI000013232F,UniRef:UniRef100_P0AAE2,UniRef:UniRef50_Q88CZ8,UniRef:UniRef90_P0AAE2
contig_1	Pyrodigal	gene	411360	413177	.	+	.	ID=GCA000010485_00387_gene;locus_tag=GCA000010485_00387;gene=malZ
contig_1	Pyrodigal	CDS	411360	413177	.	+	0	ID=GCA000010485_00387;Name=maltodextrin glucosidase;locus_tag=GCA000010485_00387;product=maltodextrin glucosidase;Dbxref=GO:0000023,GO:0004558,GO:0005737,GO:0005975,GO:0030980,GO:0042803;gene=malZ;Parent=GCA000010485_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000979366.1,SO:0001217,UniParc:UPI0001C22B0F,UniRef:UniRef100_A0A066T5T1,UniRef:UniRef50_P21517,UniRef:UniRef90_P21517;ec_number=3.2.1.20
contig_1	Pyrodigal	gene	413182	413763	.	-	.	ID=GCA000010485_00388_gene;locus_tag=GCA000010485_00388;gene=acpH
contig_1	Pyrodigal	CDS	413182	413763	.	-	0	ID=GCA000010485_00388;Name=ACP phosphodiesterase;locus_tag=GCA000010485_00388;product=ACP phosphodiesterase;Dbxref=GO:0006633,GO:0008770;gene=acpH;Parent=GCA000010485_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08682,RefSeq:WP_001009870.1,SO:0001217,UniParc:UPI0001610B8D,UniRef:UniRef100_B7UJM7,UniRef:UniRef50_P21515,UniRef:UniRef90_P21515;ec_number=3.1.4.14
contig_1	Pyrodigal	gene	413856	414926	.	+	.	ID=GCA000010485_00389_gene;locus_tag=GCA000010485_00389;gene=queA
contig_1	Pyrodigal	CDS	413856	414926	.	+	0	ID=GCA000010485_00389;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA000010485_00389;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0002099,GO:0005737,GO:0006400,GO:0008616,GO:0051075;gene=queA;Parent=GCA000010485_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_001266506.1,SO:0001217,UniParc:UPI00005EFB46,UniRef:UniRef100_Q0TKN6,UniRef:UniRef50_P0A7F9,UniRef:UniRef90_P0A7F9;ec_number=2.4.99.17
contig_1	Pyrodigal	gene	414981	416108	.	+	.	ID=GCA000010485_00390_gene;locus_tag=GCA000010485_00390;gene=tgt
contig_1	Pyrodigal	CDS	414981	416108	.	+	0	ID=GCA000010485_00390;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA000010485_00390;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA000010485_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_000667319.1,SO:0001217,UniParc:UPI0000136CE9,UniRef:UniRef100_P0A847,UniRef:UniRef50_P0A847,UniRef:UniRef90_P0A847;ec_number=2.4.2.29
contig_1	Pyrodigal	gene	416131	416463	.	+	.	ID=GCA000010485_00391_gene;locus_tag=GCA000010485_00391;gene=yajC
contig_1	Pyrodigal	CDS	416131	416463	.	+	0	ID=GCA000010485_00391;Name=preprotein translocase subunit YajC;locus_tag=GCA000010485_00391;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015031,GO:0015450;gene=yajC;Parent=GCA000010485_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_000007629.1,SO:0001217,UniParc:UPI000013A0EF,UniRef:UniRef100_P0ADZ7,UniRef:UniRef50_P0ADZ7,UniRef:UniRef90_P0ADZ7
contig_1	Pyrodigal	gene	416524	418338	.	+	.	ID=GCA000010485_00392_gene;locus_tag=GCA000010485_00392;gene=secD
contig_1	Pyrodigal	CDS	416524	418338	.	+	0	ID=GCA000010485_00392;Name=Protein translocase subunit SecD;locus_tag=GCA000010485_00392;product=Protein translocase subunit SecD;Dbxref=GO:0005886,GO:0006605,GO:0015450,GO:0043952,GO:0065002;gene=secD;Parent=GCA000010485_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,SO:0001217,UniParc:UPI00005EFB47,UniRef:UniRef100_E2QGF2,UniRef:UniRef50_P0AG90,UniRef:UniRef90_P0AG90
contig_1	Pyrodigal	gene	418349	419320	.	+	.	ID=GCA000010485_00393_gene;locus_tag=GCA000010485_00393;gene=secF
contig_1	Pyrodigal	CDS	418349	419320	.	+	0	ID=GCA000010485_00393;Name=Protein translocase subunit SecF;locus_tag=GCA000010485_00393;product=Protein translocase subunit SecF;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0015450,GO:0016020,GO:0031522,GO:0032978,GO:0043952,GO:0065002;gene=secF;Parent=GCA000010485_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0341,COG:U,RefSeq:WP_000046637.1,SO:0001217,UniParc:UPI0000031A3E,UniRef:UniRef100_P0AG93,UniRef:UniRef50_P0AG93,UniRef:UniRef90_P0AG93
contig_1	Pyrodigal	gene	419450	419797	.	+	.	ID=GCA000010485_00394_gene;locus_tag=GCA000010485_00394;gene=yajD
contig_1	Pyrodigal	CDS	419450	419797	.	+	0	ID=GCA000010485_00394;Name=HNH nuclease YajD;locus_tag=GCA000010485_00394;product=HNH nuclease YajD;Dbxref=GO:0003676,GO:0004519,GO:0005829,GO:0008270;gene=yajD;Parent=GCA000010485_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000974813,RefSeq:WP_000974813.1,SO:0001217,UniParc:UPI000013A0F0,UniRef:UniRef100_P0AAQ2,UniRef:UniRef50_P0AAQ2,UniRef:UniRef90_P0AAQ2;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	419835	420719	.	-	.	ID=GCA000010485_00395_gene;locus_tag=GCA000010485_00395;gene=tsx
contig_1	Pyrodigal	CDS	419835	420719	.	-	0	ID=GCA000010485_00395;Name=nucleoside-specific channel-forming protein Tsx;locus_tag=GCA000010485_00395;product=nucleoside-specific channel-forming protein Tsx;Dbxref=GO:0005337,GO:0006811,GO:0009279,GO:0015288,GO:0046930;gene=tsx;Parent=GCA000010485_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295328,COG:COG3248,COG:M,KEGG:K05517,RefSeq:WP_012896742.1,SO:0001217,UniParc:UPI0001C22B10,UniRef:UniRef100_UPI0001C22B10,UniRef:UniRef50_P0A927,UniRef:UniRef90_P0A927
contig_1	Pyrodigal	gene	421018	421557	.	-	.	ID=GCA000010485_00396_gene;locus_tag=GCA000010485_00396;gene=yajI
contig_1	Pyrodigal	CDS	421018	421557	.	-	0	ID=GCA000010485_00396;Name=putative lipoprotein YajI;locus_tag=GCA000010485_00396;product=putative lipoprotein YajI;Dbxref=GO:0005886;gene=yajI;Parent=GCA000010485_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295828.1,SO:0001217,UniParc:UPI0001C22B11,UniRef:UniRef100_A0A061YLC4,UniRef:UniRef50_P46122,UniRef:UniRef90_P46122
contig_1	Pyrodigal	gene	421708	422157	.	+	.	ID=GCA000010485_00397_gene;locus_tag=GCA000010485_00397;gene=nrdR
contig_1	Pyrodigal	CDS	421708	422157	.	+	0	ID=GCA000010485_00397;Name=transcriptional regulator NrdR;locus_tag=GCA000010485_00397;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000010485_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_000543535.1,SO:0001217,UniParc:UPI000013A2AC,UniRef:UniRef100_P0A8D0,UniRef:UniRef50_P0A8D0,UniRef:UniRef90_P0A8D0
contig_1	Pyrodigal	gene	422161	423264	.	+	.	ID=GCA000010485_00398_gene;locus_tag=GCA000010485_00398;gene=ribD
contig_1	Pyrodigal	CDS	422161	423264	.	+	0	ID=GCA000010485_00398;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000010485_00398;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008270,GO:0008703,GO:0008835,GO:0009231,GO:0050661;gene=ribD;Parent=GCA000010485_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,RefSeq:WP_001150440.1,SO:0001217,UniParc:UPI00000DE7F8,UniRef:UniRef100_E2QGF8,UniRef:UniRef50_P25539,UniRef:UniRef90_P25539;ec_number=3.5.4.26
contig_1	Pyrodigal	gene	423353	423823	.	+	.	ID=GCA000010485_00399_gene;locus_tag=GCA000010485_00399;gene=ribE
contig_1	Pyrodigal	CDS	423353	423823	.	+	0	ID=GCA000010485_00399;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000010485_00399;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005829,GO:0009231,GO:0009349;gene=ribE;Parent=GCA000010485_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_001021161.1,SO:0001217,UniParc:UPI00000000D1,UniRef:UniRef100_A8AK39,UniRef:UniRef50_P66038,UniRef:UniRef90_A8AK39;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	423843	424262	.	+	.	ID=GCA000010485_00400_gene;locus_tag=GCA000010485_00400;gene=nusB
contig_1	Pyrodigal	CDS	423843	424262	.	+	0	ID=GCA000010485_00400;Name=transcription antitermination factor NusB;locus_tag=GCA000010485_00400;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000010485_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_000801125.1,SO:0001217,UniParc:UPI0000111463,UniRef:UniRef100_P0A780,UniRef:UniRef50_P0A780,UniRef:UniRef90_P0A780
contig_1	Pyrodigal	gene	424340	425317	.	+	.	ID=GCA000010485_00401_gene;locus_tag=GCA000010485_00401;gene=thiL
contig_1	Pyrodigal	CDS	424340	425317	.	+	0	ID=GCA000010485_00401;Name=thiamine-phosphate kinase;locus_tag=GCA000010485_00401;product=thiamine-phosphate kinase;Dbxref=GO:0000287,GO:0005524,GO:0009030,GO:0009228,GO:0009229,GO:0046872;gene=thiL;Parent=GCA000010485_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0611,COG:H,KEGG:K00946,RefSeq:WP_000742109.1,SO:0001217,UniParc:UPI0000136E3F,UniRef:UniRef100_P0AGG0,UniRef:UniRef50_P0AGG0,UniRef:UniRef90_P0AGG0;ec_number=2.7.4.16
contig_1	Pyrodigal	gene	425295	425813	.	+	.	ID=GCA000010485_00402_gene;locus_tag=GCA000010485_00402;gene=pgpA
contig_1	Pyrodigal	CDS	425295	425813	.	+	0	ID=GCA000010485_00402;Name=phosphatidylglycerophosphatase A;locus_tag=GCA000010485_00402;product=phosphatidylglycerophosphatase A;Dbxref=GO:0005886,GO:0006629,GO:0006655,GO:0008962,GO:0009395,GO:0032026,GO:0042577,GO:0046474,GO:0046839,GO:0046872;gene=pgpA;Parent=GCA000010485_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1267,COG:I,RefSeq:WP_000154050.1,SO:0001217,UniParc:UPI0001C22B12,UniRef:UniRef100_A0A061YN70,UniRef:UniRef50_P18200,UniRef:UniRef90_P18200;ec_number=3.1.3.27
contig_1	Pyrodigal	gene	425867	426841	.	-	.	ID=GCA000010485_00403_gene;locus_tag=GCA000010485_00403;gene=yajO
contig_1	Pyrodigal	CDS	425867	426841	.	-	0	ID=GCA000010485_00403;Name=1-deoxyxylulose-5-phosphate synthase YajO;locus_tag=GCA000010485_00403;product=1-deoxyxylulose-5-phosphate synthase YajO;Dbxref=GO:0005829,GO:0006772,GO:0016491,GO:1902767;gene=yajO;Parent=GCA000010485_00403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001199800,COG:COG0667,COG:HR,RefSeq:WP_001199825.1,SO:0001217,UniParc:UPI0001C22B13,UniRef:UniRef100_A0A061YF33,UniRef:UniRef50_P77735,UniRef:UniRef90_P77735;ec_number=1.17.1.-
contig_1	Pyrodigal	gene	426896	428758	.	-	.	ID=GCA000010485_00404_gene;locus_tag=GCA000010485_00404;gene=dxs
contig_1	Pyrodigal	CDS	426896	428758	.	-	0	ID=GCA000010485_00404;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA000010485_00404;product=1-deoxy-D-xylulose-5-phosphate synthase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0008615,GO:0008661,GO:0009228,GO:0009240,GO:0016114,GO:0019288,GO:0030976,GO:0052865;gene=dxs;Parent=GCA000010485_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1154,COG:HI,KEGG:K01662,RefSeq:WP_000006816.1,SO:0001217,UniParc:UPI00000DE7FC,UniRef:UniRef100_Q8FKB9,UniRef:UniRef50_P77488,UniRef:UniRef90_P77488;ec_number=2.2.1.7
contig_1	Pyrodigal	gene	428783	429682	.	-	.	ID=GCA000010485_00405_gene;locus_tag=GCA000010485_00405;gene=ispA
contig_1	Pyrodigal	CDS	428783	429682	.	-	0	ID=GCA000010485_00405;Name=(2E%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA000010485_00405;product=(2E%2C6E)-farnesyl diphosphate synthase;Dbxref=GO:0004161,GO:0004337,GO:0004659,GO:0005829,GO:0008299,GO:0033384,GO:0045337,GO:0046872;gene=ispA;Parent=GCA000010485_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_000347219.1,SO:0001217,UniParc:UPI0001C22B14,UniRef:UniRef100_A0A066T1F6,UniRef:UniRef50_P22939,UniRef:UniRef90_P22939;ec_number=2.5.1.10
contig_1	Pyrodigal	gene	429682	429924	.	-	.	ID=GCA000010485_00406_gene;locus_tag=GCA000010485_00406;gene=xseB
contig_1	Pyrodigal	CDS	429682	429924	.	-	0	ID=GCA000010485_00406;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000010485_00406;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000010485_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_001124935.1,SO:0001217,UniParc:UPI00001586B9,UniRef:UniRef100_P0A8G9,UniRef:UniRef50_P0A8G9,UniRef:UniRef90_P0A8G9;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	430130	431578	.	+	.	ID=GCA000010485_00407_gene;locus_tag=GCA000010485_00407;gene=thiI
contig_1	Pyrodigal	CDS	430130	431578	.	+	0	ID=GCA000010485_00407;Name=tRNA sulfurtransferase;locus_tag=GCA000010485_00407;product=tRNA sulfurtransferase;Dbxref=GO:0000049,GO:0002937,GO:0004810,GO:0005524,GO:0005829,GO:0009228,GO:0009229,GO:0052837,GO:0140741;gene=thiI;Parent=GCA000010485_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,KEGG:K03151,RefSeq:WP_000668686.1,SO:0001217,UniParc:UPI0001C22B15,UniRef:UniRef100_A0A066T5U9,UniRef:UniRef50_P77718,UniRef:UniRef90_P77718;ec_number=2.8.1.4
contig_1	Pyrodigal	gene	431632	432222	.	-	.	ID=GCA000010485_00408_gene;locus_tag=GCA000010485_00408;gene=yajL
contig_1	Pyrodigal	CDS	431632	432222	.	-	0	ID=GCA000010485_00408;Name=protein deglycase YajL;locus_tag=GCA000010485_00408;product=protein deglycase YajL;Dbxref=GO:0005737,GO:0006281,GO:0036524;gene=yajL;Parent=GCA000010485_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001276309.1,SO:0001217,UniParc:UPI00005EECD5,UniRef:UniRef100_A0A8S7TNG0,UniRef:UniRef50_Q46948,UniRef:UniRef90_Q46948;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	432185	433096	.	-	.	ID=GCA000010485_00409_gene;locus_tag=GCA000010485_00409;gene=panE
contig_1	Pyrodigal	CDS	432185	433096	.	-	0	ID=GCA000010485_00409;Name=2-dehydropantoate 2-reductase;locus_tag=GCA000010485_00409;product=2-dehydropantoate 2-reductase;Dbxref=GO:0005737,GO:0008677,GO:0015940,GO:0050661;gene=panE;Parent=GCA000010485_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000705836.1,SO:0001217,UniParc:UPI0001887227,UniRef:UniRef100_A0A061KR04,UniRef:UniRef50_P0A9J4,UniRef:UniRef90_P0A9J4;ec_number=1.1.1.169
contig_1	Pyrodigal	gene	433264	433755	.	+	.	ID=GCA000010485_00410_gene;locus_tag=GCA000010485_00410;gene=yajQ
contig_1	Pyrodigal	CDS	433264	433755	.	+	0	ID=GCA000010485_00410;Name=nucleotide binding protein YajQ;locus_tag=GCA000010485_00410;product=nucleotide binding protein YajQ;Dbxref=GO:0000166,GO:0005829;gene=yajQ;Parent=GCA000010485_00410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001138904,COG:COG1666,COG:T,KEGG:K09767,RefSeq:WP_001138904.1,SO:0001217,UniParc:UPI000018F705,UniRef:UniRef100_P0A8E7,UniRef:UniRef50_P0A8E7,UniRef:UniRef90_P0A8E7
contig_1	Pyrodigal	gene	433883	435247	.	-	.	ID=GCA000010485_00411_gene;locus_tag=GCA000010485_00411;gene=yajR
contig_1	Pyrodigal	CDS	433883	435247	.	-	0	ID=GCA000010485_00411;Name=Inner membrane transport protein YajR;locus_tag=GCA000010485_00411;product=Inner membrane transport protein YajR;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0055085;gene=yajR;Parent=GCA000010485_00411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001000986.1,SO:0001217,UniParc:UPI00021859B9,UniRef:UniRef100_A0A061YLE0,UniRef:UniRef50_P77726,UniRef:UniRef90_P77726
contig_1	Pyrodigal	gene	435396	436286	.	-	.	ID=GCA000010485_00412_gene;locus_tag=GCA000010485_00412;gene=cyoE
contig_1	Pyrodigal	CDS	435396	436286	.	-	0	ID=GCA000010485_00412;Name=heme o synthase;locus_tag=GCA000010485_00412;product=heme o synthase;Dbxref=GO:0005886,GO:0008495,GO:0016020,GO:0048034;gene=cyoE;Parent=GCA000010485_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0109,COG:HI,RefSeq:WP_000576425.1,SO:0001217,UniParc:UPI00005EFB52,UniRef:UniRef100_A1A897,UniRef:UniRef50_P0AEA5,UniRef:UniRef90_P0AEA5;ec_number=2.5.1.141
contig_1	Pyrodigal	gene	436298	436627	.	-	.	ID=GCA000010485_00413_gene;locus_tag=GCA000010485_00413
contig_1	Pyrodigal	CDS	436298	436627	.	-	0	ID=GCA000010485_00413;Name=cytochrome o ubiquinol oxidase subunit IV;locus_tag=GCA000010485_00413;product=cytochrome o ubiquinol oxidase subunit IV;Parent=GCA000010485_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02300,RefSeq:WP_000019796.1,SO:0001217,UniParc:UPI00005EFB53,UniRef:UniRef100_E2QGH3,UniRef:UniRef50_F0KHU8,UniRef:UniRef90_D2TL23;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	436627	437241	.	-	.	ID=GCA000010485_00414_gene;locus_tag=GCA000010485_00414;gene=cyoC
contig_1	Pyrodigal	CDS	436627	437241	.	-	0	ID=GCA000010485_00414;Name=cytochrome o ubiquinol oxidase subunit III;locus_tag=GCA000010485_00414;product=cytochrome o ubiquinol oxidase subunit III;Dbxref=GO:0004129,GO:0005886,GO:0009486,GO:0019646,GO:0022904;gene=cyoC;Parent=GCA000010485_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1845,RefSeq:WP_000179819.1,SO:0001217,UniParc:UPI0000111626,UniRef:UniRef100_P0ABJ3,UniRef:UniRef50_P0ABJ3,UniRef:UniRef90_P0ABJ3;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	437231	439222	.	-	.	ID=GCA000010485_00415_gene;locus_tag=GCA000010485_00415;gene=cyoB
contig_1	Pyrodigal	CDS	437231	439222	.	-	0	ID=GCA000010485_00415;Name=cytochrome o ubiquinol oxidase subunit I;locus_tag=GCA000010485_00415;product=cytochrome o ubiquinol oxidase subunit I;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009060,GO:0009319,GO:0009486,GO:0015078,GO:0015453,GO:0015990,GO:0016682,GO:0019646,GO:0020037,GO:0022904,GO:0048039;gene=cyoB;Parent=GCA000010485_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0843,KEGG:K02298,RefSeq:WP_000467176.1,SO:0001217,UniParc:UPI0001C22B17,UniRef:UniRef100_A0A066T1G8,UniRef:UniRef50_P0ABI8,UniRef:UniRef90_P0ABI8;ec_number=7.1.1.3
contig_1	Pyrodigal	gene	439244	440191	.	-	.	ID=GCA000010485_00416_gene;locus_tag=GCA000010485_00416;gene=cyoA
contig_1	Pyrodigal	CDS	439244	440191	.	-	0	ID=GCA000010485_00416;Name=cytochrome o ubiquinol oxidase subunit II;locus_tag=GCA000010485_00416;product=cytochrome o ubiquinol oxidase subunit II;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009060,GO:0009319,GO:0009486,GO:0015078,GO:0015453,GO:0015990,GO:0016682,GO:0019646,GO:0022900,GO:0042773;gene=cyoA;Parent=GCA000010485_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1622,KEGG:K02297,RefSeq:WP_001239434.1,SO:0001217,UniParc:UPI0000DACD4D,UniRef:UniRef100_E2QGH6,UniRef:UniRef50_P0ABJ1,UniRef:UniRef90_P0ABJ1;ec_number=7.1.1.3
contig_1	Pyrodigal	gene	440651	442126	.	-	.	ID=GCA000010485_00417_gene;locus_tag=GCA000010485_00417;gene=ampG
contig_1	Pyrodigal	CDS	440651	442126	.	-	0	ID=GCA000010485_00417;Name=muropeptide MFS transporter AmpG;locus_tag=GCA000010485_00417;product=muropeptide MFS transporter AmpG;Dbxref=GO:0005886,GO:0009254,GO:0015293,GO:0015647,GO:0016020,GO:0022857,GO:0055085,GO:0071555;gene=ampG;Parent=GCA000010485_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08218,RefSeq:WP_000098434.1,SO:0001217,UniParc:UPI000187B91F,UniRef:UniRef100_A0A061YN89,UniRef:UniRef50_P0AE16,UniRef:UniRef90_P0AE16
contig_1	Pyrodigal	gene	442170	442748	.	-	.	ID=GCA000010485_00418_gene;locus_tag=GCA000010485_00418;gene=yajG
contig_1	Pyrodigal	CDS	442170	442748	.	-	0	ID=GCA000010485_00418;Name=putative lipoprotein YajG;locus_tag=GCA000010485_00418;product=putative lipoprotein YajG;Dbxref=GO:0005886;gene=yajG;Parent=GCA000010485_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3056,COG:S,KEGG:K07286,RefSeq:WP_001295326.1,SO:0001217,UniParc:UPI000013A0F5,UniRef:UniRef100_P0ADA5,UniRef:UniRef50_P0ADA5,UniRef:UniRef90_P0ADA5
contig_1	Pyrodigal	gene	443056	443370	.	+	.	ID=GCA000010485_00419_gene;locus_tag=GCA000010485_00419;gene=bolA
contig_1	Pyrodigal	CDS	443056	443370	.	+	0	ID=GCA000010485_00419;Name=transcriptional regulator BolA;locus_tag=GCA000010485_00419;product=transcriptional regulator BolA;Dbxref=GO:0003677,GO:0005829,GO:0006351;gene=bolA;Parent=GCA000010485_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0271,COG:KT,RefSeq:WP_001305485.1,SO:0001217,UniParc:UPI0001825E15,UniRef:UniRef100_P0ABE2,UniRef:UniRef50_P0ABE2,UniRef:UniRef90_P0ABE2
contig_1	Pyrodigal	gene	443714	445012	.	+	.	ID=GCA000010485_00420_gene;locus_tag=GCA000010485_00420;gene=tig
contig_1	Pyrodigal	CDS	443714	445012	.	+	0	ID=GCA000010485_00420;Name=trigger factor;locus_tag=GCA000010485_00420;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000010485_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_001198388.1,SO:0001217,UniParc:UPI00000DE807,UniRef:UniRef100_Q8FKA7,UniRef:UniRef50_P0A850,UniRef:UniRef90_P0A850;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	445258	445881	.	+	.	ID=GCA000010485_00421_gene;locus_tag=GCA000010485_00421;gene=clpP
contig_1	Pyrodigal	CDS	445258	445881	.	+	0	ID=GCA000010485_00421;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA000010485_00421;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117;gene=clpP;Parent=GCA000010485_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,RefSeq:WP_000122253.1,SO:0001217,UniParc:UPI0000127B3A,UniRef:UniRef100_P0A6G7,UniRef:UniRef50_P0A6G7,UniRef:UniRef90_P0A6G7;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	446007	447281	.	+	.	ID=GCA000010485_00422_gene;locus_tag=GCA000010485_00422;gene=clpX
contig_1	Pyrodigal	CDS	446007	447281	.	+	0	ID=GCA000010485_00422;Name=ATP-dependent protease ATP-binding subunit ClpX;locus_tag=GCA000010485_00422;product=ATP-dependent protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009368,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000010485_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_000130299.1,SO:0001217,UniParc:UPI0001C228BE,UniRef:UniRef100_A0A066SXC7,UniRef:UniRef50_P0A6H1,UniRef:UniRef90_P0A6H1;ec_number=3.4.21.92
contig_1	Infernal	gene	447302	447397	.	-	.	ID=GCA000010485_00423_gene;locus_tag=GCA000010485_00423;gene=sraA
contig_1	Infernal	ncRNA	447302	447397	5.9e-17	-	.	ID=GCA000010485_00423;Name=sraA;locus_tag=GCA000010485_00423;gene=sraA;product=sraA;Dbxref=RFAM:RF02029;Parent=GCA000010485_00423_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02029
contig_1	Pyrodigal	gene	447469	449823	.	+	.	ID=GCA000010485_00424_gene;locus_tag=GCA000010485_00424;gene=lon_P403L
contig_1	Pyrodigal	CDS	447469	449823	.	+	0	ID=GCA000010485_00424;Name=Lon protease;locus_tag=GCA000010485_00424;product=Lon protease;Dbxref=GO:0004176,GO:0004252,GO:0005524,GO:0005737,GO:0006508,GO:0006515,GO:0016887,GO:0034605,GO:0043565;gene=lon_P403L;Parent=GCA000010485_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0466,COG:O,RefSeq:WP_001295325.1,SO:0001217,UniParc:UPI000012E7F9,UniRef:UniRef100_P0A9M0,UniRef:UniRef50_P0A9M0,UniRef:UniRef90_P0A9M0;ec_number=3.4.21.53
contig_1	Pyrodigal	gene	450032	450304	.	+	.	ID=GCA000010485_00425_gene;locus_tag=GCA000010485_00425;gene=hupB
contig_1	Pyrodigal	CDS	450032	450304	.	+	0	ID=GCA000010485_00425;Name=nucleoid-associated protein HU-beta;locus_tag=GCA000010485_00425;product=nucleoid-associated protein HU-beta;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hupB;Parent=GCA000010485_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001043542.1,SO:0001217,UniParc:UPI0000128EF7,UniRef:UniRef100_P0ACF4,UniRef:UniRef50_P0ACF4,UniRef:UniRef90_P0ACF4
contig_1	Pyrodigal	gene	450496	452367	.	+	.	ID=GCA000010485_00426_gene;locus_tag=GCA000010485_00426;gene=ppiD
contig_1	Pyrodigal	CDS	450496	452367	.	+	0	ID=GCA000010485_00426;Name=peptidylprolyl isomerase;locus_tag=GCA000010485_00426;product=peptidylprolyl isomerase;Dbxref=GO:0003755,GO:0005886,GO:0042802,GO:0061077;gene=ppiD;Parent=GCA000010485_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_000969359.1,SO:0001217,UniParc:UPI0001C228BF,UniRef:UniRef100_A0A066T5W9,UniRef:UniRef50_P0ADY1,UniRef:UniRef90_P0ADY1;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	452518	452889	.	+	.	ID=GCA000010485_00427_gene;locus_tag=GCA000010485_00427;gene=ybaV
contig_1	Pyrodigal	CDS	452518	452889	.	+	0	ID=GCA000010485_00427;Name=putative protein YbaV;locus_tag=GCA000010485_00427;product=putative protein YbaV;Dbxref=GO:0003677,GO:0006281,GO:0015627,GO:0015628;gene=ybaV;Parent=GCA000010485_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,RefSeq:WP_000680295.1,SO:0001217,UniParc:UPI0001C228C0,UniRef:UniRef100_A0A061KVH8,UniRef:UniRef50_P0AAR8,UniRef:UniRef90_P0AAR8
contig_1	Pyrodigal	gene	452995	453393	.	+	.	ID=GCA000010485_00428_gene;locus_tag=GCA000010485_00428;gene=fadM
contig_1	Pyrodigal	CDS	452995	453393	.	+	0	ID=GCA000010485_00428;Name=long-chain acyl-CoA thioesterase FadM;locus_tag=GCA000010485_00428;product=long-chain acyl-CoA thioesterase FadM;Dbxref=GO:0006635,GO:0047617;gene=fadM;Parent=GCA000010485_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001194534,COG:COG0824,COG:I,RefSeq:WP_001194552.1,SO:0001217,UniParc:UPI00000DE809,UniRef:UniRef100_E2QGI7,UniRef:UniRef50_P77712,UniRef:UniRef90_P77712;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	453445	454140	.	-	.	ID=GCA000010485_00429_gene;locus_tag=GCA000010485_00429;gene=queC
contig_1	Pyrodigal	CDS	453445	454140	.	-	0	ID=GCA000010485_00429;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA000010485_00429;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0005524,GO:0008270,GO:0008616,GO:0016879;gene=queC;Parent=GCA000010485_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,RefSeq:WP_000817231.1,SO:0001217,UniParc:UPI0001C228C1,UniRef:UniRef100_A0A3H9KHQ2,UniRef:UniRef50_P77756,UniRef:UniRef90_P77756;ec_number=6.3.4.20
contig_1	Pyrodigal	gene	454205	455905	.	-	.	ID=GCA000010485_00430_gene;locus_tag=GCA000010485_00430;gene=ybaE
contig_1	Pyrodigal	CDS	454205	455905	.	-	0	ID=GCA000010485_00430;Name=putative protein YbaE;locus_tag=GCA000010485_00430;product=putative protein YbaE;Dbxref=GO:0015833,GO:1904680;gene=ybaE;Parent=GCA000010485_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001238258.1,SO:0001217,UniParc:UPI0001C228C2,UniRef:UniRef100_A0A061YMH4,UniRef:UniRef50_P46890,UniRef:UniRef90_P46890
contig_1	Pyrodigal	gene	456005	456823	.	+	.	ID=GCA000010485_00431_gene;locus_tag=GCA000010485_00431;gene=cof
contig_1	Pyrodigal	CDS	456005	456823	.	+	0	ID=GCA000010485_00431;Name=HMP-PP phosphatase;locus_tag=GCA000010485_00431;product=HMP-PP phosphatase;Dbxref=GO:0000287,GO:0002145,GO:0016791,GO:0016818;gene=cof;Parent=GCA000010485_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11938,RefSeq:WP_001545831.1,SO:0001217,UniParc:UPI0001C228C3,UniRef:UniRef100_A0A7I0KT55,UniRef:UniRef50_P46891,UniRef:UniRef90_P46891;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	456976	457434	.	+	.	ID=GCA000010485_00432_gene;locus_tag=GCA000010485_00432;gene=decR
contig_1	Pyrodigal	CDS	456976	457434	.	+	0	ID=GCA000010485_00432;Name=DNA-binding transcriptional regulator DecR;locus_tag=GCA000010485_00432;product=DNA-binding transcriptional regulator DecR;Dbxref=GO:0000287,GO:0002145,GO:0016791,GO:0016818;gene=decR;Parent=GCA000010485_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000884589,KEGG:K11938,RefSeq:WP_000884589.1,SO:0001217,UniParc:UPI000013A2B9,UniRef:UniRef100_P0ACJ5,UniRef:UniRef50_P0ACJ5,UniRef:UniRef90_P0ACJ5;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	457464	459236	.	+	.	ID=GCA000010485_00433_gene;locus_tag=GCA000010485_00433;gene=mdlA
contig_1	Pyrodigal	CDS	457464	459236	.	+	0	ID=GCA000010485_00433;Name=SmdA family multidrug ABC transporter permease/ATP-binding protein;locus_tag=GCA000010485_00433;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0008559,GO:0016020,GO:0016887,GO:0042626,GO:0046618,GO:0055085,GO:0140359;gene=mdlA;Parent=GCA000010485_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_001235637.1,SO:0001217,UniParc:UPI0001C228C4,UniRef:UniRef100_A0A7I0KT63,UniRef:UniRef50_P77265,UniRef:UniRef90_P77265;ec_number=7.6.2.2
contig_1	Pyrodigal	gene	459229	461010	.	+	.	ID=GCA000010485_00434_gene;locus_tag=GCA000010485_00434;gene=mdlB
contig_1	Pyrodigal	CDS	459229	461010	.	+	0	ID=GCA000010485_00434;Name=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;locus_tag=GCA000010485_00434;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0008559,GO:0016020,GO:0016887,GO:0034040,GO:0046618,GO:0055085,GO:0140359;gene=mdlB;Parent=GCA000010485_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_001256207.1,SO:0001217,UniParc:UPI0001C228C5,UniRef:UniRef100_A0A7I0KT54,UniRef:UniRef50_P0AAG5,UniRef:UniRef90_P0AAG5;ec_number=7.6.2.2
contig_1	Pyrodigal	gene	461191	461529	.	+	.	ID=GCA000010485_00435_gene;locus_tag=GCA000010485_00435;gene=glnK
contig_1	Pyrodigal	CDS	461191	461529	.	+	0	ID=GCA000010485_00435;Name=P-II family nitrogen regulator;locus_tag=GCA000010485_00435;product=P-II family nitrogen regulator;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006808,GO:0030234;gene=glnK;Parent=GCA000010485_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0347,COG:TE,RefSeq:WP_000780338.1,SO:0001217,UniParc:UPI0000111973,UniRef:UniRef100_P0AC55,UniRef:UniRef50_P0AC55,UniRef:UniRef90_P0AC55
contig_1	Pyrodigal	gene	461559	462845	.	+	.	ID=GCA000010485_00436_gene;locus_tag=GCA000010485_00436;gene=amtB
contig_1	Pyrodigal	CDS	461559	462845	.	+	0	ID=GCA000010485_00436;Name=ammonium transporter AmtB;locus_tag=GCA000010485_00436;product=ammonium transporter AmtB;Dbxref=GO:0005886,GO:0008519,GO:0015670,GO:0042802,GO:0072488;gene=amtB;Parent=GCA000010485_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0004,COG:P,KEGG:K03320,RefSeq:WP_000685051.1,SO:0001217,UniParc:UPI0001C228C6,UniRef:UniRef100_A0A061YLH2,UniRef:UniRef50_P69681,UniRef:UniRef90_P69681
contig_1	Pyrodigal	gene	462894	463754	.	-	.	ID=GCA000010485_00437_gene;locus_tag=GCA000010485_00437;gene=tesB
contig_1	Pyrodigal	CDS	462894	463754	.	-	0	ID=GCA000010485_00437;Name=acyl-CoA thioesterase II;locus_tag=GCA000010485_00437;product=acyl-CoA thioesterase II;Dbxref=GO:0005829,GO:0006637,GO:0009062,GO:0042802,GO:0042803,GO:0047617;gene=tesB;Parent=GCA000010485_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1946,COG:I,RefSeq:WP_000075870.1,SO:0001217,UniParc:UPI0000E44EB5,UniRef:UniRef100_A0A0D6I665,UniRef:UniRef50_P0AGG2,UniRef:UniRef90_P0AGG2;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	463972	464544	.	+	.	ID=GCA000010485_00438_gene;locus_tag=GCA000010485_00438
contig_1	Pyrodigal	CDS	463972	464544	.	+	0	ID=GCA000010485_00438;Name=hypothetical protein;locus_tag=GCA000010485_00438;product=hypothetical protein;Parent=GCA000010485_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000779841.1,SO:0001217,UniParc:UPI0001C228C7,UniRef:UniRef100_A0A3K0JS06,UniRef:UniRef90_P77717
contig_1	Pyrodigal	gene	464575	464886	.	-	.	ID=GCA000010485_00439_gene;locus_tag=GCA000010485_00439;gene=atl
contig_1	Pyrodigal	CDS	464575	464886	.	-	0	ID=GCA000010485_00439;Name=DNA base-flipping protein;locus_tag=GCA000010485_00439;product=DNA base-flipping protein;Dbxref=GO:0003677,GO:0003824,GO:0006281;gene=atl;Parent=GCA000010485_00439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3695,COG:K,KEGG:K07443,RefSeq:WP_000409908.1,SO:0001217,UniParc:UPI00005EFBA8,UniRef:UniRef100_A0A2S5RTS6,UniRef:UniRef50_P0AFP2,UniRef:UniRef90_P0AFP2
contig_1	Infernal	gene	465049	465145	.	+	.	ID=GCA000010485_00440_gene;locus_tag=GCA000010485_00440;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	465049	465145	1e-10	+	.	ID=GCA000010485_00440;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000010485_00440;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000010485_00440_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	Pyrodigal	gene	465265	465618	.	+	.	ID=GCA000010485_00441_gene;locus_tag=GCA000010485_00441;gene=ybaA
contig_1	Pyrodigal	CDS	465265	465618	.	+	0	ID=GCA000010485_00441;Name=putative protein YbaA;locus_tag=GCA000010485_00441;product=putative protein YbaA;gene=ybaA;Parent=GCA000010485_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5507,COG:S,RefSeq:WP_000878147.1,SO:0001217,UniParc:UPI0001C228C8,UniRef:UniRef100_A0A7I0KT57,UniRef:UniRef50_P0AAQ6,UniRef:UniRef90_P0AAQ6
contig_1	Pyrodigal	gene	465660	467210	.	-	.	ID=GCA000010485_00442_gene;locus_tag=GCA000010485_00442;gene=pdeB
contig_1	Pyrodigal	CDS	465660	467210	.	-	0	ID=GCA000010485_00442;Name=cyclic-guanylate-specific phosphodiesterase PdeB;locus_tag=GCA000010485_00442;product=cyclic-guanylate-specific phosphodiesterase PdeB;Dbxref=GO:0005886,GO:0071111;gene=pdeB;Parent=GCA000010485_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001310610,KEGG:K26148,RefSeq:WP_024210481.1,SO:0001217,UniParc:UPI0002F2615D,UniRef:UniRef100_UPI0002F2615D,UniRef:UniRef50_P77473,UniRef:UniRef90_P77473;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	467374	467844	.	-	.	ID=GCA000010485_00443_gene;locus_tag=GCA000010485_00443;gene=ylaC
contig_1	Pyrodigal	CDS	467374	467844	.	-	0	ID=GCA000010485_00443;Name=Inner membrane protein YlaC;locus_tag=GCA000010485_00443;product=Inner membrane protein YlaC;Dbxref=GO:0005886;gene=ylaC;Parent=GCA000010485_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000136192.1,SO:0001217,UniParc:UPI000018F716,UniRef:UniRef100_P0AAS0,UniRef:UniRef50_P0AAS0,UniRef:UniRef90_P0AAS0
contig_1	Pyrodigal	gene	467960	468511	.	-	.	ID=GCA000010485_00444_gene;locus_tag=GCA000010485_00444;gene=maa
contig_1	Pyrodigal	CDS	467960	468511	.	-	0	ID=GCA000010485_00444;Name=maltose O-acetyltransferase;locus_tag=GCA000010485_00444;product=maltose O-acetyltransferase;Dbxref=GO:0005829,GO:0008374,GO:0008925,GO:0016407,GO:0032991,GO:0042802;gene=maa;Parent=GCA000010485_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,KEGG:K00661,RefSeq:WP_000102539.1,SO:0001217,UniParc:UPI00000DE815,UniRef:UniRef100_E2QH53,UniRef:UniRef50_P77791,UniRef:UniRef90_P77791;ec_number=2.3.1.79
contig_1	Pyrodigal	gene	468684	468902	.	-	.	ID=GCA000010485_00445_gene;locus_tag=GCA000010485_00445;gene=tomB
contig_1	Pyrodigal	CDS	468684	468902	.	-	0	ID=GCA000010485_00445;Name=Hha toxicity modulator TomB;locus_tag=GCA000010485_00445;product=Hha toxicity modulator TomB;Dbxref=GO:0003677;gene=tomB;Parent=GCA000010485_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05839,RefSeq:WP_001291435.1,SO:0001217,UniParc:UPI000000093E,UniRef:UniRef100_P0ACE3,UniRef:UniRef50_P0ACE3,UniRef:UniRef90_P0ACE3
contig_1	Pyrodigal	gene	468928	469302	.	-	.	ID=GCA000010485_00446_gene;locus_tag=GCA000010485_00446;gene=tomB
contig_1	Pyrodigal	CDS	468928	469302	.	-	0	ID=GCA000010485_00446;Name=Hha toxicity modulator TomB;locus_tag=GCA000010485_00446;product=Hha toxicity modulator TomB;Dbxref=GO:0003677,GO:0005737,GO:0044010;gene=tomB;Parent=GCA000010485_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19162,RefSeq:WP_000344800.1,SO:0001217,UniParc:UPI000013A2B2,UniRef:UniRef100_P0AAR0,UniRef:UniRef50_P0AAR0,UniRef:UniRef90_P0AAR0
contig_1	Pyrodigal	gene	469848	472997	.	-	.	ID=GCA000010485_00447_gene;locus_tag=GCA000010485_00447;gene=acrB
contig_1	Pyrodigal	CDS	469848	472997	.	-	0	ID=GCA000010485_00447;Name=efflux RND transporter permease AcrB;locus_tag=GCA000010485_00447;product=efflux RND transporter permease AcrB;Dbxref=GO:0005886,GO:0009410,GO:0009636,GO:0015125,GO:0015562,GO:0015567,GO:0015721,GO:0015895,GO:0015908,GO:0016020,GO:0042802,GO:0042908,GO:0042910,GO:0042930,GO:0042931,GO:0046677,GO:0098567,GO:0140330,GO:1990281;gene=acrB;Parent=GCA000010485_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001132469,COG:COG0841,COG:V,RefSeq:WP_001132478.1,SO:0001217,UniParc:UPI0001C228CA,UniRef:UniRef100_A0A066SXF2,UniRef:UniRef50_P31224,UniRef:UniRef90_P31224
contig_1	Pyrodigal	gene	473020	474213	.	-	.	ID=GCA000010485_00448_gene;locus_tag=GCA000010485_00448;gene=acrA
contig_1	Pyrodigal	CDS	473020	474213	.	-	0	ID=GCA000010485_00448;Name=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;locus_tag=GCA000010485_00448;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;Dbxref=GO:0005886,GO:0009410,GO:0009636,GO:0015125,GO:0015567,GO:0015721,GO:0015895,GO:0015908,GO:0030288,GO:0042802,GO:0042908,GO:0046677,GO:0098567,GO:0140330,GO:1990281;gene=acrA;Parent=GCA000010485_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001039202,BlastRules:WP_001295324,BlastRules:WP_002892072,BlastRules:WP_021241633,COG:COG0845,COG:MV,RefSeq:WP_001295833.1,SO:0001217,UniParc:UPI00005EFBAC,UniRef:UniRef100_B9VUA5,UniRef:UniRef50_P0AE06,UniRef:UniRef90_P0AE06
contig_1	Pyrodigal	gene	474355	475002	.	+	.	ID=GCA000010485_00449_gene;locus_tag=GCA000010485_00449;gene=acrR
contig_1	Pyrodigal	CDS	474355	475002	.	+	0	ID=GCA000010485_00449;Name=multidrug efflux transporter transcriptional repressor AcrR;locus_tag=GCA000010485_00449;product=multidrug efflux transporter transcriptional repressor AcrR;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0009410,GO:0015643,GO:0043565,GO:0045892;gene=acrR;Parent=GCA000010485_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000101745,BlastRules:WP_000101755,BlastRules:WP_002892080,COG:COG1309,COG:K,KEGG:K03577,RefSeq:WP_000101737.1,SO:0001217,UniParc:UPI00001253A1,UniRef:UniRef100_P0ACS9,UniRef:UniRef50_P0ACS9,UniRef:UniRef90_P0ACS9
contig_1	Pyrodigal	gene	475130	478492	.	+	.	ID=GCA000010485_00450_gene;locus_tag=GCA000010485_00450;gene=mscK
contig_1	Pyrodigal	CDS	475130	478492	.	+	0	ID=GCA000010485_00450;Name=mechanosensitive channel MscK;locus_tag=GCA000010485_00450;product=mechanosensitive channel MscK;Dbxref=GO:0005886,GO:0006813,GO:0008381,GO:0009992,GO:0016020,GO:0035864,GO:0055085;gene=mscK;Parent=GCA000010485_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4942,COG:D,KEGG:K05802,RefSeq:WP_000177739.1,SO:0001217,UniParc:UPI0001C228CB,UniRef:UniRef100_A0A061KQV5,UniRef:UniRef50_P77338,UniRef:UniRef90_P77338
contig_1	Pyrodigal	gene	478531	478695	.	-	.	ID=GCA000010485_00451_gene;locus_tag=GCA000010485_00451;gene=rsmS
contig_1	Pyrodigal	CDS	478531	478695	.	-	0	ID=GCA000010485_00451;Name=pleiotropic regulatory protein RsmS;locus_tag=GCA000010485_00451;product=pleiotropic regulatory protein RsmS;Dbxref=GO:0036460;gene=rsmS;Parent=GCA000010485_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000051144.1,SO:0001217,UniParc:UPI0001C228CC,UniRef:UniRef100_A0A066SXS9,UniRef:UniRef50_P45807,UniRef:UniRef90_P45807
contig_1	Pyrodigal	gene	478709	479236	.	-	.	ID=GCA000010485_00452_gene;locus_tag=GCA000010485_00452;gene=priC
contig_1	Pyrodigal	CDS	478709	479236	.	-	0	ID=GCA000010485_00452;Name=primosomal replication protein N'';locus_tag=GCA000010485_00452;product=primosomal replication protein N'';Dbxref=GO:0003677,GO:0006261,GO:0006268,GO:0006269,GO:0006270,GO:0031297,GO:1990077,GO:1990159,GO:1990160;gene=priC;Parent=GCA000010485_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3923,COG:L,KEGG:K04067,RefSeq:WP_000844862.1,SO:0001217,UniParc:UPI0001C228CD,UniRef:UniRef100_A0A061KQ46,UniRef:UniRef50_P23862,UniRef:UniRef90_P23862
contig_1	Pyrodigal	gene	479306	479683	.	+	.	ID=GCA000010485_00453_gene;locus_tag=GCA000010485_00453;gene=ybaN
contig_1	Pyrodigal	CDS	479306	479683	.	+	0	ID=GCA000010485_00453;Name=DUF454 domain-containing protein;locus_tag=GCA000010485_00453;product=DUF454 domain-containing protein;Dbxref=GO:0005886;gene=ybaN;Parent=GCA000010485_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_001188900.1,SO:0001217,UniParc:UPI00000DE81B,UniRef:UniRef100_A0A066T1L0,UniRef:UniRef50_P0AAR5,UniRef:UniRef90_P0AAR5
contig_1	Pyrodigal	gene	479836	480387	.	+	.	ID=GCA000010485_00454_gene;locus_tag=GCA000010485_00454;gene=apt
contig_1	Pyrodigal	CDS	479836	480387	.	+	0	ID=GCA000010485_00454;Name=adenine phosphoribosyltransferase;locus_tag=GCA000010485_00454;product=adenine phosphoribosyltransferase;Dbxref=GO:0002055,GO:0003999,GO:0005737,GO:0006166,GO:0006168,GO:0016208,GO:0044209;gene=apt;Parent=GCA000010485_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,RefSeq:WP_000127356.1,SO:0001217,UniParc:UPI0000125CCE,UniRef:UniRef100_P69503,UniRef:UniRef50_P69503,UniRef:UniRef90_P69503;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	480516	482447	.	+	.	ID=GCA000010485_00455_gene;locus_tag=GCA000010485_00455;gene=dnaX
contig_1	Pyrodigal	CDS	480516	482447	.	+	0	ID=GCA000010485_00455;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000010485_00455;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0006261,GO:0009360,GO:0016887,GO:0046872,GO:0075523;gene=dnaX;Parent=GCA000010485_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,KEGG:K02343,RefSeq:WP_000122044.1,SO:0001217,UniParc:UPI0001C228F1,UniRef:UniRef100_A0A061YF80,UniRef:UniRef50_P06710,UniRef:UniRef90_P06710;ec_number=2.7.7.7
contig_1	Infernal	regulatory_region	481780	481844	1.1e-16	+	.	ID=EFPPCJGBKI_299;Name=DnaX ribosomal frameshifting element;product=DnaX ribosomal frameshifting element;Dbxref=RFAM:RF00382;inference=profile:Rfam:RF00382;Note=SO:0001427;regulatory_class=recoding_stimulatory_region
contig_1	Pyrodigal	gene	482500	482829	.	+	.	ID=GCA000010485_00456_gene;locus_tag=GCA000010485_00456;gene=ybaB
contig_1	Pyrodigal	CDS	482500	482829	.	+	0	ID=GCA000010485_00456;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000010485_00456;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA000010485_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,KEGG:K09747,RefSeq:WP_000467098.1,SO:0001217,UniParc:UPI000005A1F2,UniRef:UniRef100_P0A8B5,UniRef:UniRef50_P0A8B5,UniRef:UniRef90_P0A8B5
contig_1	Pyrodigal	gene	482829	483434	.	+	.	ID=GCA000010485_00457_gene;locus_tag=GCA000010485_00457;gene=recR
contig_1	Pyrodigal	CDS	482829	483434	.	+	0	ID=GCA000010485_00457;Name=recombination mediator RecR;locus_tag=GCA000010485_00457;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000010485_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_001195025.1,SO:0001217,UniParc:UPI00001335C6,UniRef:UniRef100_P0A7H6,UniRef:UniRef50_P0A7H6,UniRef:UniRef90_P0A7H6
contig_1	Pyrodigal	gene	483544	485418	.	+	.	ID=GCA000010485_00458_gene;locus_tag=GCA000010485_00458;gene=htpG
contig_1	Pyrodigal	CDS	483544	485418	.	+	0	ID=GCA000010485_00458;Name=molecular chaperone HtpG;locus_tag=GCA000010485_00458;product=molecular chaperone HtpG;Dbxref=GO:0005524,GO:0005737,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=htpG;Parent=GCA000010485_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0326,COG:O,RefSeq:WP_000678189.1,SO:0001217,UniParc:UPI000187B995,UniRef:UniRef100_A0A061KUS9,UniRef:UniRef50_P0A6Z3,UniRef:UniRef90_P0A6Z3
contig_1	Pyrodigal	gene	485599	486243	.	+	.	ID=GCA000010485_00459_gene;locus_tag=GCA000010485_00459;gene=adk
contig_1	Pyrodigal	CDS	485599	486243	.	+	0	ID=GCA000010485_00459;Name=adenylate kinase;locus_tag=GCA000010485_00459;product=adenylate kinase;Dbxref=GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0044209;gene=adk;Parent=GCA000010485_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001220233.1,SO:0001217,UniParc:UPI0000110548,UniRef:UniRef100_P69441,UniRef:UniRef50_P69441,UniRef:UniRef90_P69441;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	486375	487337	.	+	.	ID=GCA000010485_00460_gene;locus_tag=GCA000010485_00460;gene=hemH
contig_1	Pyrodigal	CDS	486375	487337	.	+	0	ID=GCA000010485_00460;Name=ferrochelatase;locus_tag=GCA000010485_00460;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0006779,GO:0006783,GO:0046872;gene=hemH;Parent=GCA000010485_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_001250114.1,SO:0001217,UniParc:UPI00000DE81F,UniRef:UniRef100_Q8FK83,UniRef:UniRef50_P23871,UniRef:UniRef90_P23871;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	487334	488293	.	-	.	ID=GCA000010485_00461_gene;locus_tag=GCA000010485_00461;gene=aes
contig_1	Pyrodigal	CDS	487334	488293	.	-	0	ID=GCA000010485_00461;Name=acetyl esterase;locus_tag=GCA000010485_00461;product=acetyl esterase;Dbxref=GO:0005737,GO:0016787,GO:0052689;gene=aes;Parent=GCA000010485_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01066,RefSeq:WP_000801794.1,SO:0001217,UniParc:UPI0001C228F2,UniRef:UniRef100_A0A066SXT9,UniRef:UniRef50_P23872,UniRef:UniRef90_P23872;ec_number=3.1.1.6
contig_1	Pyrodigal	gene	488445	489749	.	+	.	ID=GCA000010485_00462_gene;locus_tag=GCA000010485_00462;gene=gsk
contig_1	Pyrodigal	CDS	488445	489749	.	+	0	ID=GCA000010485_00462;Name=inosine/guanosine kinase;locus_tag=GCA000010485_00462;product=inosine/guanosine kinase;Dbxref=GO:0005524,GO:0006166,GO:0008906,GO:0032263,GO:0032264,GO:0097216,GO:0106366;gene=gsk;Parent=GCA000010485_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671574,COG:COG0524,COG:G,RefSeq:WP_000671574.1,SO:0001217,UniParc:UPI000012D65D,UniRef:UniRef100_P0AEW6,UniRef:UniRef50_P0AEW6,UniRef:UniRef90_P0AEW6;ec_number=2.7.1.73
contig_1	Infernal	gene	489767	489844	.	+	.	ID=GCA000010485_00463_gene;locus_tag=GCA000010485_00463;gene=naRNA4
contig_1	Infernal	ncRNA	489767	489844	3.8e-12	+	.	ID=GCA000010485_00463;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00463;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00463_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	489879	491555	.	-	.	ID=GCA000010485_00464_gene;locus_tag=GCA000010485_00464;gene=ybaL
contig_1	Pyrodigal	CDS	489879	491555	.	-	0	ID=GCA000010485_00464;Name=YbaL family putative K(+) efflux transporter;locus_tag=GCA000010485_00464;product=YbaL family putative K(+) efflux transporter;Dbxref=GO:0000166,GO:0005886,GO:0006813,GO:0008324,GO:0015297,GO:0016020,GO:0051139,GO:1902600;gene=ybaL;Parent=GCA000010485_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4651,COG:P,KEGG:K26735,RefSeq:WP_000546254.1,SO:0001217,UniParc:UPI00000DE821,UniRef:UniRef100_E2QH72,UniRef:UniRef50_P39830,UniRef:UniRef90_P39830
contig_1	Pyrodigal	gene	491794	493014	.	-	.	ID=GCA000010485_00465_gene;locus_tag=GCA000010485_00465;gene=fsr
contig_1	Pyrodigal	CDS	491794	493014	.	-	0	ID=GCA000010485_00465;Name=fosmidomycin MFS transporter;locus_tag=GCA000010485_00465;product=fosmidomycin MFS transporter;Dbxref=GO:0005886,GO:0006974,GO:0022857,GO:0046677;gene=fsr;Parent=GCA000010485_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001251608,COG:COG2223,COG:P,RefSeq:WP_001251634.1,SO:0001217,UniParc:UPI00000D03DB,UniRef:UniRef100_C3TL77,UniRef:UniRef50_P52067,UniRef:UniRef90_P52067
contig_1	Pyrodigal	gene	493232	494884	.	+	.	ID=GCA000010485_00466_gene;locus_tag=GCA000010485_00466;gene=ushA
contig_1	Pyrodigal	CDS	493232	494884	.	+	0	ID=GCA000010485_00466;Name=bifunctional UDP-sugar hydrolase/5'-nucleotidase;locus_tag=GCA000010485_00466;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;Dbxref=GO:0000166,GO:0008253,GO:0008768,GO:0009166,GO:0016787,GO:0030288,GO:0046872,GO:0106411;gene=ushA;Parent=GCA000010485_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000771748,COG:COG0737,COG:FV,RefSeq:WP_000771748.1,SO:0001217,UniParc:UPI0000112E87,UniRef:UniRef100_P07024,UniRef:UniRef50_P07024,UniRef:UniRef90_P07024;ec_number=3.6.1.45
contig_1	Pyrodigal	gene	494922	495425	.	-	.	ID=GCA000010485_00467_gene;locus_tag=GCA000010485_00467
contig_1	Pyrodigal	CDS	494922	495425	.	-	0	ID=GCA000010485_00467;Name=hypothetical protein;locus_tag=GCA000010485_00467;product=hypothetical protein;Parent=GCA000010485_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000667000.1,SO:0001217,UniParc:UPI00005EFBB5,UniRef:UniRef100_E2QH75,UniRef:UniRef50_B7LV22,UniRef:UniRef90_B7LV22
contig_1	Pyrodigal	gene	495422	496222	.	-	.	ID=GCA000010485_00468_gene;locus_tag=GCA000010485_00468
contig_1	Pyrodigal	CDS	495422	496222	.	-	0	ID=GCA000010485_00468;Name=DUF6896 domain-containing protein;locus_tag=GCA000010485_00468;product=DUF6896 domain-containing protein;Parent=GCA000010485_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000439798.1,SO:0001217,UniParc:UPI0000DACD5C,UniRef:UniRef100_A0A061YMM2,UniRef:UniRef50_B7LJF0,UniRef:UniRef90_B7LJF0
contig_1	Pyrodigal	gene	496246	496725	.	-	.	ID=GCA000010485_00469_gene;locus_tag=GCA000010485_00469;gene=ybaK
contig_1	Pyrodigal	CDS	496246	496725	.	-	0	ID=GCA000010485_00469;Name=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;locus_tag=GCA000010485_00469;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;Dbxref=GO:0002161,GO:0005737,GO:0006412,GO:0016829;gene=ybaK;Parent=GCA000010485_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,KEGG:K03976,RefSeq:WP_000186633.1,SO:0001217,UniParc:UPI00000DE822,UniRef:UniRef100_E2QH77,UniRef:UniRef50_P45202,UniRef:UniRef90_P0AAR3;ec_number=4.2.-.-
contig_1	Infernal	gene	496847	496930	.	+	.	ID=GCA000010485_00470_gene;locus_tag=GCA000010485_00470;gene=sroB
contig_1	Infernal	ncRNA	496847	496930	2.9e-12	+	.	ID=GCA000010485_00470;Name=sroB RNA;locus_tag=GCA000010485_00470;gene=sroB;product=sroB RNA;Dbxref=RFAM:RF00368;Parent=GCA000010485_00470_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00368
contig_1	Pyrodigal	gene	496929	497723	.	-	.	ID=GCA000010485_00471_gene;locus_tag=GCA000010485_00471;gene=ybaP
contig_1	Pyrodigal	CDS	496929	497723	.	-	0	ID=GCA000010485_00471;Name=putative protein YbaP;locus_tag=GCA000010485_00471;product=putative protein YbaP;gene=ybaP;Parent=GCA000010485_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3735,COG:S,KEGG:K09973,RefSeq:WP_000365147.1,SO:0001217,UniParc:UPI0001C228F3,UniRef:UniRef100_A0A061YNE2,UniRef:UniRef50_P77301,UniRef:UniRef90_P77301
contig_1	Pyrodigal	gene	497856	498158	.	+	.	ID=GCA000010485_00472_gene;locus_tag=GCA000010485_00472
contig_1	Pyrodigal	CDS	497856	498158	.	+	0	ID=GCA000010485_00472;Name=RelE/ParE family protein%2C cytotoxic translational repressor of toxin-antitoxin stability system;locus_tag=GCA000010485_00472;product=RelE/ParE family protein%2C cytotoxic translational repressor of toxin-antitoxin stability system;Parent=GCA000010485_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000057523.1,SO:0001217,UniParc:UPI0000DACD5D,UniRef:UniRef100_A0A192CI47,UniRef:UniRef50_A0A2N5DZA4,UniRef:UniRef90_B7LJF3
contig_1	Pyrodigal	gene	498194	498535	.	+	.	ID=GCA000010485_00473_gene;locus_tag=GCA000010485_00473;gene=ybaQ
contig_1	Pyrodigal	CDS	498194	498535	.	+	0	ID=GCA000010485_00473;Name=HigA family addiction module antitoxin;locus_tag=GCA000010485_00473;product=HigA family addiction module antitoxin;Dbxref=GO:0003677;gene=ybaQ;Parent=GCA000010485_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3093,COG:V,RefSeq:WP_000806442.1,SO:0001217,UniParc:UPI000013A2BA,UniRef:UniRef100_P0A9T6,UniRef:UniRef50_P0A9T6,UniRef:UniRef90_P0A9T6
contig_1	Pyrodigal	gene	498593	501097	.	-	.	ID=GCA000010485_00474_gene;locus_tag=GCA000010485_00474;gene=copA
contig_1	Pyrodigal	CDS	498593	501097	.	-	0	ID=GCA000010485_00474;Name=copper-exporting P-type ATPase CopA;locus_tag=GCA000010485_00474;product=copper-exporting P-type ATPase CopA;Dbxref=GO:0005507,GO:0005524,GO:0005737,GO:0005886,GO:0006812,GO:0006825,GO:0010273,GO:0015080,GO:0015662,GO:0016020,GO:0016887,GO:0019829,GO:0043682,GO:0055070,GO:0060003,GO:0071280,GO:0071292,GO:0075523,GO:0140581,GO:1902601;gene=copA;Parent=GCA000010485_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,KEGG:K17686,RefSeq:WP_000083947.1,SO:0001217,UniParc:UPI0001C228F4,UniRef:UniRef100_A0A066SXH7,UniRef:UniRef50_Q59385,UniRef:UniRef90_Q59385;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	501359	502291	.	+	.	ID=GCA000010485_00475_gene;locus_tag=GCA000010485_00475;gene=glsA
contig_1	Pyrodigal	CDS	501359	502291	.	+	0	ID=GCA000010485_00475;Name=glutaminase A;locus_tag=GCA000010485_00475;product=glutaminase A;Dbxref=GO:0004359,GO:0006537,GO:0006541,GO:0006543;gene=glsA;Parent=GCA000010485_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000883041.1,SO:0001217,UniParc:UPI00000DE825,UniRef:UniRef100_Q8FK76,UniRef:UniRef50_Q8XD23,UniRef:UniRef90_Q8XD23;ec_number=3.5.1.2
contig_1	Pyrodigal	gene	502294	503586	.	+	.	ID=GCA000010485_00476_gene;locus_tag=GCA000010485_00476;gene=ybaT
contig_1	Pyrodigal	CDS	502294	503586	.	+	0	ID=GCA000010485_00476;Name=Inner membrane transport protein YbaT;locus_tag=GCA000010485_00476;product=Inner membrane transport protein YbaT;Dbxref=GO:0005886,GO:0006865,GO:0009268,GO:0022857,GO:1990169;gene=ybaT;Parent=GCA000010485_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000982162.1,SO:0001217,UniParc:UPI00000DE826,UniRef:UniRef100_E2QH82,UniRef:UniRef50_P77400,UniRef:UniRef90_P77400
contig_1	Pyrodigal	gene	503711	504118	.	+	.	ID=GCA000010485_00477_gene;locus_tag=GCA000010485_00477;gene=cueR
contig_1	Pyrodigal	CDS	503711	504118	.	+	0	ID=GCA000010485_00477;Name=Cu(I)-responsive transcriptional regulator;locus_tag=GCA000010485_00477;product=Cu(I)-responsive transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0005507,GO:0005737,GO:0045893;gene=cueR;Parent=GCA000010485_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_001026743.1,SO:0001217,UniParc:UPI00000DE827,UniRef:UniRef100_Q8FK74,UniRef:UniRef50_P0A9G4,UniRef:UniRef90_Q8XD09
contig_1	Pyrodigal	gene	504119	504598	.	-	.	ID=GCA000010485_00478_gene;locus_tag=GCA000010485_00478
contig_1	Pyrodigal	CDS	504119	504598	.	-	0	ID=GCA000010485_00478;Name=hypothetical protein;locus_tag=GCA000010485_00478;product=hypothetical protein;Parent=GCA000010485_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000209C581,UniRef:UniRef100_A0AAF0SNY4,UniRef:UniRef50_A0AAF0SNY4,UniRef:UniRef90_A0AAF0SNY4
contig_1	Pyrodigal	gene	504948	505406	.	-	.	ID=GCA000010485_00479_gene;locus_tag=GCA000010485_00479;gene=ybbJ
contig_1	Pyrodigal	CDS	504948	505406	.	-	0	ID=GCA000010485_00479;Name=Inner membrane protein YbbJ;locus_tag=GCA000010485_00479;product=Inner membrane protein YbbJ;Dbxref=GO:0005886;gene=ybbJ;Parent=GCA000010485_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1585,COG:O,RefSeq:WP_000970318.1,SO:0001217,UniParc:UPI0000D506DD,UniRef:UniRef100_A0A061YMN3,UniRef:UniRef50_P0AAS3,UniRef:UniRef90_P0AAS3
contig_1	Pyrodigal	gene	505403	506320	.	-	.	ID=GCA000010485_00480_gene;locus_tag=GCA000010485_00480;gene=qmcA
contig_1	Pyrodigal	CDS	505403	506320	.	-	0	ID=GCA000010485_00480;Name=Protein QmcA;locus_tag=GCA000010485_00480;product=Protein QmcA;Dbxref=GO:0016020;gene=qmcA;Parent=GCA000010485_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_000904497.1,SO:0001217,UniParc:UPI0000D506DE,UniRef:UniRef100_E2QH86,UniRef:UniRef50_P0AA53,UniRef:UniRef90_P0AA53
contig_1	Pyrodigal	gene	506466	507143	.	+	.	ID=GCA000010485_00481_gene;locus_tag=GCA000010485_00481;gene=fetA
contig_1	Pyrodigal	CDS	506466	507143	.	+	0	ID=GCA000010485_00481;Name=iron efflux ABC transporter ATP-binding subunit FetA;locus_tag=GCA000010485_00481;product=iron efflux ABC transporter ATP-binding subunit FetA;Dbxref=GO:0005524,GO:0005886,GO:0006826,GO:0006879,GO:0016887,GO:1903988;gene=fetA;Parent=GCA000010485_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4619,COG:P,RefSeq:WP_001157551.1,SO:0001217,UniParc:UPI00006736E6,UniRef:UniRef100_A0A066T5U5,UniRef:UniRef50_P77279,UniRef:UniRef90_P77279;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	507130	507909	.	+	.	ID=GCA000010485_00482_gene;locus_tag=GCA000010485_00482;gene=fetB
contig_1	Pyrodigal	CDS	507130	507909	.	+	0	ID=GCA000010485_00482;Name=iron efflux ABC transporter permease subunit FetB;locus_tag=GCA000010485_00482;product=iron efflux ABC transporter permease subunit FetB;Dbxref=GO:0005886,GO:0006826,GO:0006879,GO:1903988;gene=fetB;Parent=GCA000010485_00482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0390,COG:P,RefSeq:WP_001295323.1,SO:0001217,UniParc:UPI000013A2CE,UniRef:UniRef100_P77307,UniRef:UniRef50_P77307,UniRef:UniRef90_P77307
contig_1	Infernal	gene	507979	508056	.	+	.	ID=GCA000010485_00483_gene;locus_tag=GCA000010485_00483;gene=naRNA4
contig_1	Infernal	ncRNA	507979	508056	1.3e-12	+	.	ID=GCA000010485_00483;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00483;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00483_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	508092	508946	.	-	.	ID=GCA000010485_00484_gene;locus_tag=GCA000010485_00484;gene=cnoX
contig_1	Pyrodigal	CDS	508092	508946	.	-	0	ID=GCA000010485_00484;Name=chaperedoxin;locus_tag=GCA000010485_00484;product=chaperedoxin;Dbxref=GO:0005829,GO:0034599,GO:0036506,GO:0042026,GO:0045454,GO:0051082,GO:0061077;gene=cnoX;Parent=GCA000010485_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300573,COG:COG3118,COG:O,RefSeq:WP_001295322.1,SO:0001217,UniParc:UPI00002263DC,UniRef:UniRef100_A0A023L112,UniRef:UniRef50_P77395,UniRef:UniRef90_P77395
contig_1	Pyrodigal	gene	509007	509777	.	-	.	ID=GCA000010485_00485_gene;locus_tag=GCA000010485_00485;gene=ybbO
contig_1	Pyrodigal	CDS	509007	509777	.	-	0	ID=GCA000010485_00485;Name=NADP(+)-dependent aldehyde reductase;locus_tag=GCA000010485_00485;product=NADP(+)-dependent aldehyde reductase;Dbxref=GO:0008106,GO:0008202,GO:0016491;gene=ybbO;Parent=GCA000010485_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000148959,COG:COG0300,COG:R,RefSeq:WP_001524191.1,SO:0001217,UniParc:UPI0001C228F6,UniRef:UniRef100_A0A1U9U022,UniRef:UniRef50_P0AFP4,UniRef:UniRef90_P0AFP4;ec_number=1.1.1.2
contig_1	Pyrodigal	gene	509806	510399	.	-	.	ID=GCA000010485_00486_gene;locus_tag=GCA000010485_00486;gene=tesA
contig_1	Pyrodigal	CDS	509806	510399	.	-	0	ID=GCA000010485_00486;Name=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;locus_tag=GCA000010485_00486;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;Dbxref=GO:0004064,GO:0004622,GO:0006508,GO:0006629,GO:0008233,GO:0016297,GO:0016298,GO:0030288,GO:0042802,GO:0052816;gene=tesA;Parent=GCA000010485_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2755,COG:DI,RefSeq:WP_001304822.1,SO:0001217,UniParc:UPI00005EEE48,UniRef:UniRef100_A0A090LDD5,UniRef:UniRef50_P0ADA1,UniRef:UniRef90_P0ADA1;ec_number=3.1.2.2
contig_1	Pyrodigal	gene	510400	511086	.	+	.	ID=GCA000010485_00487_gene;locus_tag=GCA000010485_00487;gene=ybbA
contig_1	Pyrodigal	CDS	510400	511086	.	+	0	ID=GCA000010485_00487;Name=putative ABC transporter ATP-binding protein YbbA;locus_tag=GCA000010485_00487;product=putative ABC transporter ATP-binding protein YbbA;Dbxref=GO:0005524,GO:0016887;gene=ybbA;Parent=GCA000010485_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4181,COG:Q,RefSeq:WP_001110573.1,SO:0001217,UniParc:UPI000013A2C8,UniRef:UniRef100_P0A9T8,UniRef:UniRef50_P0A9T8,UniRef:UniRef90_P0A9T8
contig_1	Pyrodigal	gene	511083	513497	.	+	.	ID=GCA000010485_00488_gene;locus_tag=GCA000010485_00488;gene=ybbP
contig_1	Pyrodigal	CDS	511083	513497	.	+	0	ID=GCA000010485_00488;Name=putative ABC transporter permease subunit YbbP;locus_tag=GCA000010485_00488;product=putative ABC transporter permease subunit YbbP;Dbxref=GO:0005886;gene=ybbP;Parent=GCA000010485_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000561827.1,SO:0001217,UniParc:UPI0001C228F7,UniRef:UniRef100_A0A061YFB6,UniRef:UniRef50_P77504,UniRef:UniRef90_P77504
contig_1	Pyrodigal	gene	513666	515669	.	+	.	ID=GCA000010485_00489_gene;locus_tag=GCA000010485_00489
contig_1	Pyrodigal	CDS	513666	515669	.	+	0	ID=GCA000010485_00489;Name=Type VI secretion system tube protein Hcp;locus_tag=GCA000010485_00489;product=Type VI secretion system tube protein Hcp;Parent=GCA000010485_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06887,RefSeq:WP_000502301.1,SO:0001217,UniParc:UPI0001C228F8,UniRef:UniRef100_A0A066SXW3,UniRef:UniRef50_S5NC11,UniRef:UniRef90_A0A3L4BD98
contig_1	Pyrodigal	gene	515659	516318	.	+	.	ID=GCA000010485_00490_gene;locus_tag=GCA000010485_00490
contig_1	Pyrodigal	CDS	515659	516318	.	+	0	ID=GCA000010485_00490;Name=DUF2931 domain-containing protein;locus_tag=GCA000010485_00490;product=DUF2931 domain-containing protein;Parent=GCA000010485_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000395526.1,SO:0001217,UniParc:UPI0001C228F9,UniRef:UniRef100_A0AAF0NL02,UniRef:UniRef50_A9MK82,UniRef:UniRef90_A0A7I0L2G0
contig_1	Pyrodigal	gene	516325	516993	.	+	.	ID=GCA000010485_00491_gene;locus_tag=GCA000010485_00491
contig_1	Pyrodigal	CDS	516325	516993	.	+	0	ID=GCA000010485_00491;Name=DUF2931 domain-containing protein;locus_tag=GCA000010485_00491;product=DUF2931 domain-containing protein;Parent=GCA000010485_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704502.1,SO:0001217,UniParc:UPI000596BE3F,UniRef:UniRef100_A0A7I0L3I8,UniRef:UniRef50_A0A8S0FZL8,UniRef:UniRef90_A0A0C5EWJ7
contig_1	Pyrodigal	gene	517000	517668	.	+	.	ID=GCA000010485_00492_gene;locus_tag=GCA000010485_00492
contig_1	Pyrodigal	CDS	517000	517668	.	+	0	ID=GCA000010485_00492;Name=DUF2931 domain-containing protein;locus_tag=GCA000010485_00492;product=DUF2931 domain-containing protein;Parent=GCA000010485_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704501.1,SO:0001217,UniParc:UPI0003B85F53,UniRef:UniRef100_A0A061KQ13,UniRef:UniRef50_A0A8S0FZL8,UniRef:UniRef90_F4SUX1
contig_1	Pyrodigal	gene	517675	518343	.	+	.	ID=GCA000010485_00493_gene;locus_tag=GCA000010485_00493
contig_1	Pyrodigal	CDS	517675	518343	.	+	0	ID=GCA000010485_00493;Name=DUF2931 domain-containing protein;locus_tag=GCA000010485_00493;product=DUF2931 domain-containing protein;Parent=GCA000010485_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_022645036.1,SO:0001217,UniParc:UPI0003B77A75,UniRef:UniRef100_A0A0C5EWJ7,UniRef:UniRef50_A0A8S0FZL8,UniRef:UniRef90_A0A0C5EWJ7
contig_1	Pyrodigal	gene	518395	519501	.	-	.	ID=GCA000010485_00494_gene;locus_tag=GCA000010485_00494;gene=mnmH
contig_1	Pyrodigal	CDS	518395	519501	.	-	0	ID=GCA000010485_00494;Name=tRNA 2-selenouridine(34) synthase MnmH;locus_tag=GCA000010485_00494;product=tRNA 2-selenouridine(34) synthase MnmH;Dbxref=GO:0002098,GO:0016765,GO:0043828;gene=mnmH;Parent=GCA000010485_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2603,COG:J,RefSeq:WP_001157954.1,SO:0001217,UniParc:UPI0001C22928,UniRef:UniRef100_A0A061KVB9,UniRef:UniRef50_P33667,UniRef:UniRef90_P33667;ec_number=2.9.1.3
contig_1	Pyrodigal	gene	519570	520496	.	-	.	ID=GCA000010485_00495_gene;locus_tag=GCA000010485_00495;gene=allS
contig_1	Pyrodigal	CDS	519570	520496	.	-	0	ID=GCA000010485_00495;Name=HTH-type transcriptional activator AllS;locus_tag=GCA000010485_00495;product=HTH-type transcriptional activator AllS;Dbxref=GO:0003677,GO:0003700;gene=allS;Parent=GCA000010485_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K10972,RefSeq:WP_000460119.1,SO:0001217,UniParc:UPI00000DE82F,UniRef:UniRef100_Q8FK66,UniRef:UniRef50_P0ACR0,UniRef:UniRef90_P0ACR0
contig_1	Pyrodigal	gene	520726	521208	.	+	.	ID=GCA000010485_00496_gene;locus_tag=GCA000010485_00496;gene=allA
contig_1	Pyrodigal	CDS	520726	521208	.	+	0	ID=GCA000010485_00496;Name=ureidoglycolate lyase;locus_tag=GCA000010485_00496;product=ureidoglycolate lyase;Dbxref=GO:0000256,GO:0004848,GO:0006145,GO:0050385;gene=allA;Parent=GCA000010485_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3194,COG:F,KEGG:K01483,RefSeq:WP_000776372.1,SO:0001217,UniParc:UPI00005EF896,UniRef:UniRef100_B7UKI3,UniRef:UniRef50_P77731,UniRef:UniRef90_P77731;ec_number=4.3.2.3
contig_1	Pyrodigal	gene	521286	522101	.	+	.	ID=GCA000010485_00497_gene;locus_tag=GCA000010485_00497;gene=allR
contig_1	Pyrodigal	CDS	521286	522101	.	+	0	ID=GCA000010485_00497;Name=HTH-type transcriptional repressor AllR;locus_tag=GCA000010485_00497;product=HTH-type transcriptional repressor AllR;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=allR;Parent=GCA000010485_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1414,COG:K,RefSeq:WP_000141269.1,SO:0001217,UniParc:UPI0001C22929,UniRef:UniRef100_A0A061YD57,UniRef:UniRef50_P0ACN4,UniRef:UniRef90_P0ACN4
contig_1	Pyrodigal	gene	522191	523972	.	+	.	ID=GCA000010485_00498_gene;locus_tag=GCA000010485_00498;gene=gcl
contig_1	Pyrodigal	CDS	522191	523972	.	+	0	ID=GCA000010485_00498;Name=glyoxylate carboligase;locus_tag=GCA000010485_00498;product=glyoxylate carboligase;Dbxref=GO:0000287,GO:0005948,GO:0009028,GO:0009097,GO:0009099,GO:0009436,GO:0030976,GO:0042802,GO:0046296,GO:0050660,GO:0071949;gene=gcl;Parent=GCA000010485_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01608,RefSeq:WP_001295838.1,SO:0001217,UniParc:UPI0001C2292A,UniRef:UniRef100_A0A066T5W1,UniRef:UniRef50_P0AEP7,UniRef:UniRef90_P0AEP7;ec_number=4.1.1.47
contig_1	Pyrodigal	gene	523985	524761	.	+	.	ID=GCA000010485_00499_gene;locus_tag=GCA000010485_00499;gene=hyi
contig_1	Pyrodigal	CDS	523985	524761	.	+	0	ID=GCA000010485_00499;Name=hydroxypyruvate isomerase;locus_tag=GCA000010485_00499;product=hydroxypyruvate isomerase;Dbxref=GO:0008903,GO:0042803,GO:0046487;gene=hyi;Parent=GCA000010485_00499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000943566.1,SO:0001217,UniParc:UPI00000DE832,UniRef:UniRef100_A0A066T637,UniRef:UniRef50_P30147,UniRef:UniRef90_P30147;ec_number=5.3.1.22
contig_1	Pyrodigal	gene	524861	525739	.	+	.	ID=GCA000010485_00500_gene;locus_tag=GCA000010485_00500;gene=glxR
contig_1	Pyrodigal	CDS	524861	525739	.	+	0	ID=GCA000010485_00500;Name=2-hydroxy-3-oxopropionate reductase;locus_tag=GCA000010485_00500;product=2-hydroxy-3-oxopropionate reductase;Dbxref=GO:0006974,GO:0008679,GO:0009436,GO:0009442,GO:0046296,GO:0046487,GO:0050661,GO:0051287;gene=glxR;Parent=GCA000010485_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000765828.1,SO:0001217,UniParc:UPI0000D506E6,UniRef:UniRef100_E2QHA0,UniRef:UniRef50_P77161,UniRef:UniRef90_P77161;ec_number=1.1.1.60
contig_1	Pyrodigal	gene	525909	527363	.	+	.	ID=GCA000010485_00501_gene;locus_tag=GCA000010485_00501;gene=ybbW
contig_1	Pyrodigal	CDS	525909	527363	.	+	0	ID=GCA000010485_00501;Name=allantoin transporter;locus_tag=GCA000010485_00501;product=allantoin transporter;Dbxref=GO:0005886,GO:0006144,GO:0015205,GO:0015293,GO:0015720,GO:0015851,GO:0022857,GO:0055085;gene=ybbW;Parent=GCA000010485_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10975,RefSeq:WP_000401115.1,SO:0001217,UniParc:UPI00000DE834,UniRef:UniRef100_E2QHA1,UniRef:UniRef50_P75712,UniRef:UniRef90_P75712
contig_1	Pyrodigal	gene	527423	528784	.	+	.	ID=GCA000010485_00502_gene;locus_tag=GCA000010485_00502;gene=allB
contig_1	Pyrodigal	CDS	527423	528784	.	+	0	ID=GCA000010485_00502;Name=allantoinase;locus_tag=GCA000010485_00502;product=allantoinase;Dbxref=GO:0000256,GO:0004038,GO:0005737,GO:0006145,GO:0008270,GO:0050897;gene=allB;Parent=GCA000010485_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01466,RefSeq:WP_000006873.1,SO:0001217,UniParc:UPI00000DE835,UniRef:UniRef100_B7UKI9,UniRef:UniRef50_P77671,UniRef:UniRef90_P77671,VFDB:VFC0272,VFDB:VFG049120;ec_number=3.5.2.5
contig_1	Pyrodigal	gene	528840	530141	.	+	.	ID=GCA000010485_00503_gene;locus_tag=GCA000010485_00503;gene=ybbY
contig_1	Pyrodigal	CDS	528840	530141	.	+	0	ID=GCA000010485_00503;Name=uracil/xanthine transporter;locus_tag=GCA000010485_00503;product=uracil/xanthine transporter;Dbxref=GO:0005886,GO:0042906,GO:0042907;gene=ybbY;Parent=GCA000010485_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295839.1,SO:0001217,UniParc:UPI0001E8A5EE,UniRef:UniRef100_A0A061YEQ6,UniRef:UniRef50_P77328,UniRef:UniRef90_P77328
contig_1	Pyrodigal	gene	530163	531308	.	+	.	ID=GCA000010485_00504_gene;locus_tag=GCA000010485_00504;gene=glxK
contig_1	Pyrodigal	CDS	530163	531308	.	+	0	ID=GCA000010485_00504;Name=glycerate 3-kinase;locus_tag=GCA000010485_00504;product=glycerate 3-kinase;Dbxref=GO:0005524,GO:0008887,GO:0009436,GO:0031388,GO:0043798,GO:0046296;gene=glxK;Parent=GCA000010485_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295840.1,SO:0001217,UniParc:UPI0001C2292C,UniRef:UniRef100_A0A066T643,UniRef:UniRef50_P77364,UniRef:UniRef90_P77364;ec_number=2.7.1.31
contig_1	Infernal	gene	531363	531429	.	+	.	ID=GCA000010485_00505_gene;locus_tag=GCA000010485_00505;gene=STnc480
contig_1	Infernal	ncRNA	531363	531429	1.3e-12	+	.	ID=GCA000010485_00505;Name=Enterobacterial sRNA STnc480;locus_tag=GCA000010485_00505;product=Enterobacterial sRNA STnc480;Dbxref=RFAM:RF02068;Parent=GCA000010485_00505_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02068
contig_1	Pyrodigal	gene	531436	532221	.	-	.	ID=GCA000010485_00506_gene;locus_tag=GCA000010485_00506;gene=allE
contig_1	Pyrodigal	CDS	531436	532221	.	-	0	ID=GCA000010485_00506;Name=(S)-ureidoglycine aminohydrolase;locus_tag=GCA000010485_00506;product=(S)-ureidoglycine aminohydrolase;Dbxref=GO:0005737,GO:0006144,GO:0010136,GO:0030145,GO:0071522;gene=allE;Parent=GCA000010485_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000540974.1,SO:0001217,UniParc:UPI0001C2292D,UniRef:UniRef100_A0A3K3CE37,UniRef:UniRef50_P75713,UniRef:UniRef90_P75713;ec_number=3.5.3.26
contig_1	Pyrodigal	gene	532232	533467	.	-	.	ID=GCA000010485_00507_gene;locus_tag=GCA000010485_00507;gene=allC
contig_1	Pyrodigal	CDS	532232	533467	.	-	0	ID=GCA000010485_00507;Name=allantoate deiminase;locus_tag=GCA000010485_00507;product=allantoate deiminase;Dbxref=GO:0000256,GO:0005737,GO:0006144,GO:0008270,GO:0009442,GO:0030145,GO:0042803,GO:0047652;gene=allC;Parent=GCA000010485_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001385234.1,SO:0001217,UniParc:UPI0001C2292E,UniRef:UniRef100_A0A3H9KFW1,UniRef:UniRef50_P77425,UniRef:UniRef90_P77425;ec_number=3.5.3.9
contig_1	Pyrodigal	gene	533489	534538	.	-	.	ID=GCA000010485_00508_gene;locus_tag=GCA000010485_00508;gene=allD
contig_1	Pyrodigal	CDS	533489	534538	.	-	0	ID=GCA000010485_00508;Name=ureidoglycolate dehydrogenase;locus_tag=GCA000010485_00508;product=ureidoglycolate dehydrogenase;Dbxref=GO:0005737,GO:0006144,GO:0009040,GO:0009442,GO:0016491;gene=allD;Parent=GCA000010485_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00073,RefSeq:WP_000703882.1,SO:0001217,UniParc:UPI00000DE83A,UniRef:UniRef100_E2QHA7,UniRef:UniRef50_P77555,UniRef:UniRef90_P77555;ec_number=1.1.1.350
contig_1	Pyrodigal	gene	534855	536522	.	+	.	ID=GCA000010485_00509_gene;locus_tag=GCA000010485_00509;gene=fdrA
contig_1	Pyrodigal	CDS	534855	536522	.	+	0	ID=GCA000010485_00509;Name=Protein fdrA;locus_tag=GCA000010485_00509;product=Protein fdrA;gene=fdrA;Parent=GCA000010485_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02381,RefSeq:WP_000580888.1,SO:0001217,UniParc:UPI0001C2292F,UniRef:UniRef100_A0A7I0KSY7,UniRef:UniRef50_Q47208,UniRef:UniRef90_A0A0H2V520
contig_1	Pyrodigal	gene	536532	537791	.	+	.	ID=GCA000010485_00510_gene;locus_tag=GCA000010485_00510;gene=allG
contig_1	Pyrodigal	CDS	536532	537791	.	+	0	ID=GCA000010485_00510;Name=Oxamate carbamoyltransferase subunit AllG;locus_tag=GCA000010485_00510;product=Oxamate carbamoyltransferase subunit AllG;Dbxref=GO:0016740;gene=allG;Parent=GCA000010485_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495391.1,SO:0001217,UniParc:UPI0001C22930,UniRef:UniRef100_A0A7I0KT07,UniRef:UniRef50_P77129,UniRef:UniRef90_P77129;ec_number=2.1.3.5
contig_1	Pyrodigal	gene	537802	538617	.	+	.	ID=GCA000010485_00511_gene;locus_tag=GCA000010485_00511;gene=allH
contig_1	Pyrodigal	CDS	537802	538617	.	+	0	ID=GCA000010485_00511;Name=Oxamate carbamoyltransferase subunit AllH;locus_tag=GCA000010485_00511;product=Oxamate carbamoyltransferase subunit AllH;Dbxref=GO:0016740;gene=allH;Parent=GCA000010485_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001313637.1,SO:0001217,UniParc:UPI0001C22931,UniRef:UniRef100_A0A2W0GUP6,UniRef:UniRef50_P0AAS5,UniRef:UniRef90_P0AAS5;ec_number=2.1.3.5
contig_1	Pyrodigal	gene	538614	539507	.	+	.	ID=GCA000010485_00512_gene;locus_tag=GCA000010485_00512;gene=allK
contig_1	Pyrodigal	CDS	538614	539507	.	+	0	ID=GCA000010485_00512;Name=carbamate kinase;locus_tag=GCA000010485_00512;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006525,GO:0008804,GO:0019546;gene=allK;Parent=GCA000010485_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000855407.1,SO:0001217,UniParc:UPI0001C22932,UniRef:UniRef100_A0A7I0KSY5,UniRef:UniRef50_P37306,UniRef:UniRef90_P37306;ec_number=2.7.2.2
contig_1	Infernal	gene	539592	539669	.	+	.	ID=GCA000010485_00513_gene;locus_tag=GCA000010485_00513;gene=naRNA4
contig_1	Infernal	ncRNA	539592	539669	2.8e-12	+	.	ID=GCA000010485_00513;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00513;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00513_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	539692	539769	.	+	.	ID=GCA000010485_00514_gene;locus_tag=GCA000010485_00514;gene=naRNA4
contig_1	Infernal	ncRNA	539692	539769	7.9e-12	+	.	ID=GCA000010485_00514;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00514;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00514_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	539792	539869	.	+	.	ID=GCA000010485_00515_gene;locus_tag=GCA000010485_00515;gene=naRNA4
contig_1	Infernal	ncRNA	539792	539869	1.4e-11	+	.	ID=GCA000010485_00515;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00515;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00515_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	539892	539969	.	+	.	ID=GCA000010485_00516_gene;locus_tag=GCA000010485_00516;gene=naRNA4
contig_1	Infernal	ncRNA	539892	539969	2.7e-11	+	.	ID=GCA000010485_00516;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00516;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00516_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	540041	541108	.	-	.	ID=GCA000010485_00517_gene;locus_tag=GCA000010485_00517;gene=purK
contig_1	Pyrodigal	CDS	540041	541108	.	-	0	ID=GCA000010485_00517;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000010485_00517;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000010485_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0026,COG:F,RefSeq:WP_000815584.1,SO:0001217,UniParc:UPI0001C22933,UniRef:UniRef100_A0A066T1R4,UniRef:UniRef50_P09029,UniRef:UniRef90_P09029;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	541105	541614	.	-	.	ID=GCA000010485_00518_gene;locus_tag=GCA000010485_00518;gene=purE
contig_1	Pyrodigal	CDS	541105	541614	.	-	0	ID=GCA000010485_00518;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000010485_00518;product=N5-carboxyaminoimidazole ribonucleotide mutase;Dbxref=GO:0005829,GO:0006189,GO:0034023,GO:0042802;gene=purE;Parent=GCA000010485_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0041,COG:F,RefSeq:WP_001295318.1,SO:0001217,UniParc:UPI00001653C3,UniRef:UniRef100_P0AG18,UniRef:UniRef50_P0AG18,UniRef:UniRef90_P0AG18;ec_number=5.4.99.18
contig_1	Pyrodigal	gene	541710	542039	.	-	.	ID=GCA000010485_00519_gene;locus_tag=GCA000010485_00519
contig_1	Pyrodigal	CDS	541710	542039	.	-	0	ID=GCA000010485_00519;Name=Membrane protein;locus_tag=GCA000010485_00519;product=Membrane protein;Parent=GCA000010485_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001188439.1,SO:0001217,UniParc:UPI0001C22934,UniRef:UniRef100_A0A3L3HK02,UniRef:UniRef50_A0A066T653,UniRef:UniRef90_B7LJI1
contig_1	Pyrodigal	gene	542150	542872	.	-	.	ID=GCA000010485_00520_gene;locus_tag=GCA000010485_00520;gene=lpxH
contig_1	Pyrodigal	CDS	542150	542872	.	-	0	ID=GCA000010485_00520;Name=UDP-2%2C3-diacylglucosamine diphosphatase;locus_tag=GCA000010485_00520;product=UDP-2%2C3-diacylglucosamine diphosphatase;Dbxref=GO:0005737,GO:0008758,GO:0009245,GO:0016462,GO:0019897,GO:0030145;gene=lpxH;Parent=GCA000010485_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2908,COG:M,KEGG:K03269,RefSeq:WP_000212245.1,SO:0001217,UniParc:UPI00005EF8A3,UniRef:UniRef100_Q0TKB7,UniRef:UniRef50_P43341,UniRef:UniRef90_P43341;ec_number=3.6.1.54
contig_1	Pyrodigal	gene	542875	543369	.	-	.	ID=GCA000010485_00521_gene;locus_tag=GCA000010485_00521;gene=ppiB
contig_1	Pyrodigal	CDS	542875	543369	.	-	0	ID=GCA000010485_00521;Name=peptidylprolyl isomerase B;locus_tag=GCA000010485_00521;product=peptidylprolyl isomerase B;gene=ppiB;Parent=GCA000010485_00521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_000255987.1,SO:0001217,UniParc:UPI0000D506F1,UniRef:UniRef100_A0A066SXL8,UniRef:UniRef50_P83221,UniRef:UniRef90_A0A066SXL8;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	543543	544928	.	+	.	ID=GCA000010485_00522_gene;locus_tag=GCA000010485_00522;gene=cysS
contig_1	Pyrodigal	CDS	543543	544928	.	+	0	ID=GCA000010485_00522;Name=cysteine--tRNA ligase;locus_tag=GCA000010485_00522;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000010485_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_000912352.1,SO:0001217,UniParc:UPI00016A225D,UniRef:UniRef100_B1LKE5,UniRef:UniRef50_P21888,UniRef:UniRef90_P21888;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	544964	545485	.	-	.	ID=GCA000010485_00523_gene;locus_tag=GCA000010485_00523;gene=ybcI
contig_1	Pyrodigal	CDS	544964	545485	.	-	0	ID=GCA000010485_00523;Name=Inner membrane protein YbcI;locus_tag=GCA000010485_00523;product=Inner membrane protein YbcI;Dbxref=GO:0005886;gene=ybcI;Parent=GCA000010485_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_001143517.1,SO:0001217,UniParc:UPI0001C22935,UniRef:UniRef100_A0A061KUM6,UniRef:UniRef50_P45570,UniRef:UniRef90_P45570
contig_1	Pyrodigal	gene	545593	545805	.	-	.	ID=GCA000010485_00524_gene;locus_tag=GCA000010485_00524;gene=ybcJ
contig_1	Pyrodigal	CDS	545593	545805	.	-	0	ID=GCA000010485_00524;Name=ribosome-associated protein YbcJ;locus_tag=GCA000010485_00524;product=ribosome-associated protein YbcJ;gene=ybcJ;Parent=GCA000010485_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14761,RefSeq:WP_000190282.1,SO:0001217,UniParc:UPI0001C22936,UniRef:UniRef100_A0A061KV93,UniRef:UniRef50_A0A5Y3W014,UniRef:UniRef90_A0A2P6HL46
contig_1	Pyrodigal	gene	545807	546673	.	-	.	ID=GCA000010485_00525_gene;locus_tag=GCA000010485_00525;gene=folD
contig_1	Pyrodigal	CDS	545807	546673	.	-	0	ID=GCA000010485_00525;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA000010485_00525;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999;gene=folD;Parent=GCA000010485_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0190,COG:H,RefSeq:WP_000729155.1,SO:0001217,UniParc:UPI000000DF0D,UniRef:UniRef100_B7UKK6,UniRef:UniRef50_P24186,UniRef:UniRef90_P24186;ec_number=3.5.4.9
contig_1	tRNAscan-SE	gene	546944	547020	.	+	.	ID=GCA000010485_00526_gene;locus_tag=GCA000010485_00526;gene=trnR
contig_1	tRNAscan-SE	tRNA	546944	547020	.	+	.	ID=GCA000010485_00526;Name=tRNA-Arg(tct);locus_tag=GCA000010485_00526;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000010485_00526_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	547028	547654	.	-	.	ID=GCA000010485_00527_gene;locus_tag=GCA000010485_00527
contig_1	Pyrodigal	CDS	547028	547654	.	-	0	ID=GCA000010485_00527;Name=Phage integrase family protein;locus_tag=GCA000010485_00527;product=Phage integrase family protein;Parent=GCA000010485_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A462C8,UniRef:UniRef100_A0A775U5F0,UniRef:UniRef50_A0A4Q4HZN9,UniRef:UniRef90_A0A4Q4HZN9
contig_1	Pyrodigal	gene	548072	548728	.	-	.	ID=GCA000010485_00528_gene;locus_tag=GCA000010485_00528
contig_1	Pyrodigal	CDS	548072	548728	.	-	0	ID=GCA000010485_00528;Name=Methyltransferase type 12 domain-containing protein;locus_tag=GCA000010485_00528;product=Methyltransferase type 12 domain-containing protein;Parent=GCA000010485_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000742375.1,SO:0001217,UniParc:UPI0000DACD6B,UniRef:UniRef100_A0A1Y5CSJ6,UniRef:UniRef50_P77460,UniRef:UniRef90_B2TXD9
contig_1	Pyrodigal	gene	548972	549925	.	-	.	ID=GCA000010485_00529_gene;locus_tag=GCA000010485_00529;gene=ompT
contig_1	Pyrodigal	CDS	548972	549925	.	-	0	ID=GCA000010485_00529;Name=omptin family outer membrane protease OmpT;locus_tag=GCA000010485_00529;product=omptin family outer membrane protease OmpT;Dbxref=GO:0004175,GO:0004190,GO:0004252,GO:0006508,GO:0009279;gene=ompT;Parent=GCA000010485_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001201845,KEGG:K01355,RefSeq:WP_001201855.1,SO:0001217,UniParc:UPI0001C22938,UniRef:UniRef100_G9FSR7,UniRef:UniRef50_P09169,UniRef:UniRef90_P09169;ec_number=3.4.23.49
contig_1	Pyrodigal	gene	550584	551474	.	-	.	ID=GCA000010485_00530_gene;locus_tag=GCA000010485_00530;gene=ybcH
contig_1	Pyrodigal	CDS	550584	551474	.	-	0	ID=GCA000010485_00530;Name=DUF4434 domain-containing protein;locus_tag=GCA000010485_00530;product=DUF4434 domain-containing protein;Dbxref=GO:0009279,GO:0032940;gene=ybcH;Parent=GCA000010485_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224594.1,SO:0001217,UniParc:UPI0001C22939,UniRef:UniRef100_A0A3K3CE18,UniRef:UniRef50_P37325,UniRef:UniRef90_P37325
contig_1	Pyrodigal	gene	551475	554447	.	-	.	ID=GCA000010485_00531_gene;locus_tag=GCA000010485_00531;gene=nfrA
contig_1	Pyrodigal	CDS	551475	554447	.	-	0	ID=GCA000010485_00531;Name=bacteriophage adsorption protein NfrA;locus_tag=GCA000010485_00531;product=bacteriophage adsorption protein NfrA;Dbxref=GO:0009279,GO:0032940,GO:0046813;gene=nfrA;Parent=GCA000010485_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000662357,RefSeq:WP_001545839.1,SO:0001217,UniParc:UPI0001C2293A,UniRef:UniRef100_A0A7I0KUG0,UniRef:UniRef50_P31600,UniRef:UniRef90_P31600
contig_1	Pyrodigal	gene	554434	556671	.	-	.	ID=GCA000010485_00532_gene;locus_tag=GCA000010485_00532;gene=nrfB
contig_1	Pyrodigal	CDS	554434	556671	.	-	0	ID=GCA000010485_00532;Name=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;locus_tag=GCA000010485_00532;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;Dbxref=GO:0005886,GO:0016757,GO:0016887,GO:0035438,GO:0045226;gene=nrfB;Parent=GCA000010485_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11740,RefSeq:WP_000383919.1,SO:0001217,UniParc:UPI00005EF8A9,UniRef:UniRef100_E2QHC9,UniRef:UniRef50_P0AFA5,UniRef:UniRef90_P0AFA5
contig_1	Pyrodigal	gene	556821	558263	.	-	.	ID=GCA000010485_00533_gene;locus_tag=GCA000010485_00533;gene=cusS
contig_1	Pyrodigal	CDS	556821	558263	.	-	0	ID=GCA000010485_00533;Name=Cu(+)/Ag(+) sensor histidine kinase CusS;locus_tag=GCA000010485_00533;product=Cu(+)/Ag(+) sensor histidine kinase CusS;Dbxref=GO:0000155,GO:0000160,GO:0004673,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0046872,GO:0071280,GO:0071292;gene=cusS;Parent=GCA000010485_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000253839,RefSeq:WP_000253845.1,SO:0001217,UniParc:UPI0001C2297D,UniRef:UniRef100_UPI0001C2297D,UniRef:UniRef50_P77485,UniRef:UniRef90_P77485;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	558253	558936	.	-	.	ID=GCA000010485_00534_gene;locus_tag=GCA000010485_00534;gene=cusR
contig_1	Pyrodigal	CDS	558253	558936	.	-	0	ID=GCA000010485_00534;Name=copper response regulator transcription factor CusR;locus_tag=GCA000010485_00534;product=copper response regulator transcription factor CusR;Dbxref=GO:0000156,GO:0000976,GO:0003677,GO:0005829,GO:0006355,GO:0032993,GO:0042802,GO:0046688;gene=cusR;Parent=GCA000010485_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000770953,COG:COG0745,COG:TK,RefSeq:WP_000770953.1,SO:0001217,UniParc:UPI00001286FD,UniRef:UniRef100_P0ACZ8,UniRef:UniRef50_P0ACZ8,UniRef:UniRef90_P0ACZ8
contig_1	Pyrodigal	gene	559093	560475	.	+	.	ID=GCA000010485_00535_gene;locus_tag=GCA000010485_00535;gene=cusC
contig_1	Pyrodigal	CDS	559093	560475	.	+	0	ID=GCA000010485_00535;Name=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;locus_tag=GCA000010485_00535;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;Dbxref=GO:0005375,GO:0005507,GO:0006878,GO:0009279,GO:0009636,GO:0010272,GO:0010273,GO:0015288,GO:0015562,GO:0016020,GO:0019992,GO:0022857,GO:0035434,GO:0042802,GO:0046688,GO:0046930,GO:0055085,GO:0060003,GO:0070207,GO:1902601;gene=cusC;Parent=GCA000010485_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07796,RefSeq:WP_000074214.1,SO:0001217,UniParc:UPI0001C2297E,UniRef:UniRef100_A0A7I0KSW8,UniRef:UniRef50_P77211,UniRef:UniRef90_P77211,VFDB:VFC0083,VFDB:VFG034679
contig_1	Pyrodigal	gene	560499	560831	.	+	.	ID=GCA000010485_00536_gene;locus_tag=GCA000010485_00536;gene=cusF
contig_1	Pyrodigal	CDS	560499	560831	.	+	0	ID=GCA000010485_00536;Name=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;locus_tag=GCA000010485_00536;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;Dbxref=GO:0042597,GO:0046872;gene=cusF;Parent=GCA000010485_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000709870,RefSeq:WP_000709873.1,SO:0001217,UniParc:UPI000000DF18,UniRef:UniRef100_Q8CWA3,UniRef:UniRef50_Q8CWA3,UniRef:UniRef90_Q8CWA3
contig_1	Pyrodigal	gene	560847	562070	.	+	.	ID=GCA000010485_00537_gene;locus_tag=GCA000010485_00537;gene=cusB
contig_1	Pyrodigal	CDS	560847	562070	.	+	0	ID=GCA000010485_00537;Name=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;locus_tag=GCA000010485_00537;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;gene=cusB;Parent=GCA000010485_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000717162,RefSeq:WP_000717132.1,SO:0001217,UniParc:UPI0001C2297F,UniRef:UniRef100_A0A7I0L2D4,UniRef:UniRef50_A0A1J1DSF6,UniRef:UniRef90_A0A7I0L2D4
contig_1	Pyrodigal	gene	562082	565225	.	+	.	ID=GCA000010485_00538_gene;locus_tag=GCA000010485_00538;gene=cusA
contig_1	Pyrodigal	CDS	562082	565225	.	+	0	ID=GCA000010485_00538;Name=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;locus_tag=GCA000010485_00538;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;Dbxref=GO:0005886,GO:0006825,GO:0008324,GO:0042910;gene=cusA;Parent=GCA000010485_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000573945,COG:COG3696,COG:P,KEGG:K07787,RefSeq:WP_000573906.1,SO:0001217,UniParc:UPI0001C22980,UniRef:UniRef100_A0A7I0L3F2,UniRef:UniRef50_P38054,UniRef:UniRef90_P38054
contig_1	Pyrodigal	gene	565327	566709	.	+	.	ID=GCA000010485_00539_gene;locus_tag=GCA000010485_00539;gene=pheP
contig_1	Pyrodigal	CDS	565327	566709	.	+	0	ID=GCA000010485_00539;Name=phenylalanine transporter;locus_tag=GCA000010485_00539;product=phenylalanine transporter;Dbxref=GO:0005886,GO:0006865,GO:0015823,GO:0055085;gene=pheP;Parent=GCA000010485_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,KEGG:K11732,RefSeq:WP_001295847.1,SO:0001217,UniParc:UPI0000DACD6D,UniRef:UniRef100_A0A066SXN6,UniRef:UniRef50_P24207,UniRef:UniRef90_P24207
contig_1	Pyrodigal	gene	566867	568114	.	-	.	ID=GCA000010485_00540_gene;locus_tag=GCA000010485_00540;gene=ybdG
contig_1	Pyrodigal	CDS	566867	568114	.	-	0	ID=GCA000010485_00540;Name=mechanosensitive ion channel YbdG;locus_tag=GCA000010485_00540;product=mechanosensitive ion channel YbdG;Dbxref=GO:0005886,GO:0008381,GO:0071470;gene=ybdG;Parent=GCA000010485_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001153148,COG:COG0668,COG:M,KEGG:K16053,RefSeq:WP_001153138.1,SO:0001217,UniParc:UPI0001C22981,UniRef:UniRef100_A0A7I0KSW9,UniRef:UniRef50_P0AAT4,UniRef:UniRef90_P0AAT4
contig_1	Pyrodigal	gene	568222	568875	.	-	.	ID=GCA000010485_00541_gene;locus_tag=GCA000010485_00541;gene=nfsB
contig_1	Pyrodigal	CDS	568222	568875	.	-	0	ID=GCA000010485_00541;Name=oxygen-insensitive NAD(P)H nitroreductase NfsB;locus_tag=GCA000010485_00541;product=oxygen-insensitive NAD(P)H nitroreductase NfsB;Dbxref=GO:0003955,GO:0004155,GO:0005829,GO:0010181,GO:0016020,GO:0016491,GO:0042802,GO:0042803,GO:0046256;gene=nfsB;Parent=GCA000010485_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,KEGG:K10679,RefSeq:WP_000351450.1,SO:0001217,UniParc:UPI00000DE84D,UniRef:UniRef100_E2QHD8,UniRef:UniRef50_P38489,UniRef:UniRef90_P38489;ec_number=1.5.1.34
contig_1	Pyrodigal	gene	568954	569337	.	-	.	ID=GCA000010485_00542_gene;locus_tag=GCA000010485_00542;gene=ybdF
contig_1	Pyrodigal	CDS	568954	569337	.	-	0	ID=GCA000010485_00542;Name=MmcQ/YjbR family DNA-binding protein;locus_tag=GCA000010485_00542;product=MmcQ/YjbR family DNA-binding protein;gene=ybdF;Parent=GCA000010485_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2315,COG:K,RefSeq:WP_000360948.1,SO:0001217,UniParc:UPI00000DE84E,UniRef:UniRef100_A0A061LQ57,UniRef:UniRef50_P0AAT2,UniRef:UniRef90_P0AAT2
contig_1	Pyrodigal	gene	569402	569650	.	-	.	ID=GCA000010485_00543_gene;locus_tag=GCA000010485_00543;gene=ybdJ
contig_1	Pyrodigal	CDS	569402	569650	.	-	0	ID=GCA000010485_00543;Name=putative protein YbdJ;locus_tag=GCA000010485_00543;product=putative protein YbdJ;Dbxref=GO:0005886;gene=ybdJ;Parent=GCA000010485_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000682868.1,SO:0001217,UniParc:UPI0001C22982,UniRef:UniRef100_A0A7I0KSV8,UniRef:UniRef50_P77506,UniRef:UniRef90_P77506
contig_1	Pyrodigal	gene	569716	570834	.	-	.	ID=GCA000010485_00544_gene;locus_tag=GCA000010485_00544;gene=ybdK
contig_1	Pyrodigal	CDS	569716	570834	.	-	0	ID=GCA000010485_00544;Name=YbdK family carboxylate-amine ligase;locus_tag=GCA000010485_00544;product=YbdK family carboxylate-amine ligase;Dbxref=GO:0004357,GO:0005524,GO:0016879,GO:0042398,GO:0042803;gene=ybdK;Parent=GCA000010485_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2170,COG:O,KEGG:K06048,RefSeq:WP_001130662.1,SO:0001217,UniParc:UPI0001C22983,UniRef:UniRef100_A0A7I0KSX8,UniRef:UniRef50_P77213,UniRef:UniRef90_P77213;ec_number=6.3.2.2
contig_1	Infernal	gene	571129	571285	.	+	.	ID=GCA000010485_00545_gene;locus_tag=GCA000010485_00545;gene=sok
contig_1	Infernal	ncRNA	571129	571285	9.8e-14	+	.	ID=GCA000010485_00545;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_00545;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_00545_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	571277	571429	.	+	.	ID=GCA000010485_00546_gene;locus_tag=GCA000010485_00546;gene=hokE
contig_1	Pyrodigal	CDS	571277	571429	.	+	0	ID=GCA000010485_00546;Name=type I toxin-antitoxin system toxin HokE;locus_tag=GCA000010485_00546;product=type I toxin-antitoxin system toxin HokE;Dbxref=GO:0005886;gene=hokE;Parent=GCA000010485_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000956455,KEGG:K18922,RefSeq:WP_000956465.1,SO:0001217,UniParc:UPI00005EE2BB,UniRef:UniRef100_Q8XBW9,UniRef:UniRef50_Q8XBW9,UniRef:UniRef90_Q8XBW9
contig_1	Infernal	gene	571633	571787	.	+	.	ID=GCA000010485_00547_gene;locus_tag=GCA000010485_00547;gene=sok
contig_1	Infernal	ncRNA	571633	571787	2.8e-13	+	.	ID=GCA000010485_00547;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_00547;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_00547_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	571779	571931	.	+	.	ID=GCA000010485_00548_gene;locus_tag=GCA000010485_00548;gene=hokE
contig_1	Pyrodigal	CDS	571779	571931	.	+	0	ID=GCA000010485_00548;Name=type I toxin-antitoxin system toxin HokE;locus_tag=GCA000010485_00548;product=type I toxin-antitoxin system toxin HokE;Dbxref=GO:0005886,GO:0006974;gene=hokE;Parent=GCA000010485_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000956455,KEGG:K18922,RefSeq:WP_000956455.1,SO:0001217,UniParc:UPI000012CAC0,UniRef:UniRef100_P77091,UniRef:UniRef50_P77091,UniRef:UniRef90_P77091
contig_1	Pyrodigal	gene	572041	572826	.	-	.	ID=GCA000010485_00549_gene;locus_tag=GCA000010485_00549;gene=fabG
contig_1	Pyrodigal	CDS	572041	572826	.	-	0	ID=GCA000010485_00549;Name=SDR family oxidoreductase;locus_tag=GCA000010485_00549;product=SDR family oxidoreductase;Dbxref=GO:0016491;gene=fabG;Parent=GCA000010485_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000560685.1,SO:0001217,UniParc:UPI0001C22985,UniRef:UniRef100_A0A7I0L3E1,UniRef:UniRef50_A0A485B9D2,UniRef:UniRef90_A0A485B9D2
contig_1	Pyrodigal	gene	572859	573656	.	-	.	ID=GCA000010485_00550_gene;locus_tag=GCA000010485_00550;gene=fabG
contig_1	Pyrodigal	CDS	572859	573656	.	-	0	ID=GCA000010485_00550;Name=3-oxoacyl-[acyl-carrier protein] reductase;locus_tag=GCA000010485_00550;product=3-oxoacyl-[acyl-carrier protein] reductase;gene=fabG;Parent=GCA000010485_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_001189480.1,SO:0001217,UniParc:UPI0001C22986,UniRef:UniRef100_A0A515RV39,UniRef:UniRef50_A0A3R9GXV9,UniRef:UniRef90_A0A1V2BSX2
contig_1	Pyrodigal	gene	573710	574777	.	-	.	ID=GCA000010485_00551_gene;locus_tag=GCA000010485_00551;gene=araH
contig_1	Pyrodigal	CDS	573710	574777	.	-	0	ID=GCA000010485_00551;Name=Sugar ABC transporter permease;locus_tag=GCA000010485_00551;product=Sugar ABC transporter permease;gene=araH;Parent=GCA000010485_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_001072401.1,SO:0001217,UniParc:UPI0001C22987,UniRef:UniRef100_A0A061KSL5,UniRef:UniRef50_A0A0J1LK65,UniRef:UniRef90_A0A0J1LK65
contig_1	Pyrodigal	gene	574795	576339	.	-	.	ID=GCA000010485_00552_gene;locus_tag=GCA000010485_00552;gene=nupO
contig_1	Pyrodigal	CDS	574795	576339	.	-	0	ID=GCA000010485_00552;Name=ABC transporter domain-containing protein;locus_tag=GCA000010485_00552;product=ABC transporter domain-containing protein;gene=nupO;Parent=GCA000010485_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3845,COG:F,KEGG:K17204,RefSeq:WP_000937457.1,SO:0001217,UniParc:UPI0001C22988,UniRef:UniRef100_A0A066T1V1,UniRef:UniRef50_A0A485B5N9,UniRef:UniRef90_A0A0J1PBX0
contig_1	Pyrodigal	gene	576341	576961	.	-	.	ID=GCA000010485_00553_gene;locus_tag=GCA000010485_00553
contig_1	Pyrodigal	CDS	576341	576961	.	-	0	ID=GCA000010485_00553;Name=Lipoprotein;locus_tag=GCA000010485_00553;product=Lipoprotein;Parent=GCA000010485_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000359101.1,SO:0001217,UniParc:UPI0002A3C290,UniRef:UniRef100_A0A2D3Q9N6,UniRef:UniRef50_D8MRC2,UniRef:UniRef90_B7LLM4
contig_1	Pyrodigal	gene	577008	577943	.	-	.	ID=GCA000010485_00554_gene;locus_tag=GCA000010485_00554;gene=rbsB
contig_1	Pyrodigal	CDS	577008	577943	.	-	0	ID=GCA000010485_00554;Name=Periplasmic binding protein domain-containing protein;locus_tag=GCA000010485_00554;product=Periplasmic binding protein domain-containing protein;gene=rbsB;Parent=GCA000010485_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_000776799.1,SO:0001217,UniParc:UPI0001C2298A,UniRef:UniRef100_A0A066T686,UniRef:UniRef50_S1PTQ9,UniRef:UniRef90_S1PTQ9
contig_1	Pyrodigal	gene	578047	579567	.	-	.	ID=GCA000010485_00555_gene;locus_tag=GCA000010485_00555
contig_1	Pyrodigal	CDS	578047	579567	.	-	0	ID=GCA000010485_00555;Name=ATP:glycerol 3-phosphotransferase;locus_tag=GCA000010485_00555;product=ATP:glycerol 3-phosphotransferase;Parent=GCA000010485_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00864,RefSeq:WP_000457342.1,SO:0001217,UniParc:UPI0001C2298B,UniRef:UniRef100_UPI0001C2298B,UniRef:UniRef50_A0A443VQM8,UniRef:UniRef90_B7LLM2;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	579918	580868	.	-	.	ID=GCA000010485_00556_gene;locus_tag=GCA000010485_00556;gene=deoR
contig_1	Pyrodigal	CDS	579918	580868	.	-	0	ID=GCA000010485_00556;Name=Sugar-binding domain-containing protein;locus_tag=GCA000010485_00556;product=Sugar-binding domain-containing protein;gene=deoR;Parent=GCA000010485_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,RefSeq:WP_001118418.1,SO:0001217,UniParc:UPI0001C2298C,UniRef:UniRef100_A0A061KSL2,UniRef:UniRef50_A0A0T9LM22,UniRef:UniRef90_A0A0J1LK61
contig_1	Pyrodigal	gene	581230	582060	.	+	.	ID=GCA000010485_00557_gene;locus_tag=GCA000010485_00557;gene=tktA1
contig_1	Pyrodigal	CDS	581230	582060	.	+	0	ID=GCA000010485_00557;Name=Transketolase;locus_tag=GCA000010485_00557;product=Transketolase;gene=tktA1;Parent=GCA000010485_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3959,COG:G,KEGG:K00615,RefSeq:WP_001070509.1,SO:0001217,UniParc:UPI0001885B01,UniRef:UniRef100_A0A066T1V6,UniRef:UniRef50_A6VKQ4,UniRef:UniRef90_A0A0J2IAX5;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	582053	582988	.	+	.	ID=GCA000010485_00558_gene;locus_tag=GCA000010485_00558
contig_1	Pyrodigal	CDS	582053	582988	.	+	0	ID=GCA000010485_00558;Name=Transketolase;locus_tag=GCA000010485_00558;product=Transketolase;Parent=GCA000010485_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001246062.1,SO:0001217,UniParc:UPI0001C2298D,UniRef:UniRef100_A0A7I0L2B4,UniRef:UniRef50_A6VKQ3,UniRef:UniRef90_A0A2V2LRC1
contig_1	Infernal	gene	583708	583749	.	-	.	ID=GCA000010485_00559_gene;locus_tag=GCA000010485_00559;gene=ES036
contig_1	Infernal	ncRNA	583708	583749	2.7e-05	-	.	ID=GCA000010485_00559;Name=ES036 (CssrF) sRNA;locus_tag=GCA000010485_00559;product=ES036 (CssrF) sRNA;Dbxref=RFAM:RF02751;Parent=GCA000010485_00559_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02751
contig_1	Pyrodigal	gene	583824	586064	.	-	.	ID=GCA000010485_00560_gene;locus_tag=GCA000010485_00560;gene=fepA
contig_1	Pyrodigal	CDS	583824	586064	.	-	0	ID=GCA000010485_00560;Name=ferrienterobactin outer membrane transporter;locus_tag=GCA000010485_00560;product=ferrienterobactin outer membrane transporter;Dbxref=GO:0006879,GO:0009279,GO:0015344,GO:0015620,GO:0015685,GO:0016020,GO:0019904,GO:0022834,GO:0030313,GO:0033214,GO:0038023,GO:0042912,GO:0042914,GO:0042930,GO:0042931,GO:0044718,GO:1902495,GO:1903981;gene=fepA;Parent=GCA000010485_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4771,COG:P,RefSeq:WP_001034890.1,SO:0001217,UniParc:UPI0001C2298F,UniRef:UniRef100_A0A061YDS8,UniRef:UniRef50_P05825,UniRef:UniRef90_P05825,VFDB:VFC0272,VFDB:VFG000923
contig_1	Pyrodigal	gene	586307	587509	.	+	.	ID=GCA000010485_00561_gene;locus_tag=GCA000010485_00561;gene=fes
contig_1	Pyrodigal	CDS	586307	587509	.	+	0	ID=GCA000010485_00561;Name=enterobactin/ferric enterobactin esterase;locus_tag=GCA000010485_00561;product=enterobactin/ferric enterobactin esterase;Dbxref=GO:0005506,GO:0005737,GO:0008849,GO:0033214,GO:0046214;gene=fes;Parent=GCA000010485_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2382,COG:P,KEGG:K07214,RefSeq:WP_000125860.1,SO:0001217,UniParc:UPI0002A28021,UniRef:UniRef100_A0A7I0KSV3,UniRef:UniRef50_P13039,UniRef:UniRef90_P13039,VFDB:VFC0272,VFDB:VFG044159;ec_number=3.1.1.108
contig_1	Pyrodigal	gene	587512	587730	.	+	.	ID=GCA000010485_00562_gene;locus_tag=GCA000010485_00562;gene=ybdZ
contig_1	Pyrodigal	CDS	587512	587730	.	+	0	ID=GCA000010485_00562;Name=enterobactin biosynthesis protein YbdZ;locus_tag=GCA000010485_00562;product=enterobactin biosynthesis protein YbdZ;Dbxref=GO:0005829,GO:0009239,GO:0019290;gene=ybdZ;Parent=GCA000010485_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000885798,COG:COG3251,COG:Q,RefSeq:WP_000885787.1,SO:0001217,UniParc:UPI00005EF8B4,UniRef:UniRef100_A0A061Y6D6,UniRef:UniRef50_P18393,UniRef:UniRef90_P18393
contig_1	Pyrodigal	gene	587727	591608	.	+	.	ID=GCA000010485_00563_gene;locus_tag=GCA000010485_00563;gene=entF
contig_1	Pyrodigal	CDS	587727	591608	.	+	0	ID=GCA000010485_00563;Name=enterobactin synthase multienzyme complex component%2C ATP-dependent;locus_tag=GCA000010485_00563;product=enterobactin synthase multienzyme complex component%2C ATP-dependent;Dbxref=GO:0003824,GO:0005524,GO:0005829,GO:0005886,GO:0009058,GO:0009239,GO:0009366,GO:0016779,GO:0031177,GO:0043041,GO:0047527;gene=entF;Parent=GCA000010485_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3319,COG:Q,RefSeq:WP_000077736.1,SO:0001217,UniParc:UPI0001C22991,UniRef:UniRef100_A0A7I0KSU9,UniRef:UniRef50_P11454,UniRef:UniRef90_P11454,VFDB:VFC0272,VFDB:VFG000930;ec_number=6.3.2.14
contig_1	Pyrodigal	gene	591824	592957	.	+	.	ID=GCA000010485_00564_gene;locus_tag=GCA000010485_00564;gene=fepE
contig_1	Pyrodigal	CDS	591824	592957	.	+	0	ID=GCA000010485_00564;Name=LPS O-antigen length regulator;locus_tag=GCA000010485_00564;product=LPS O-antigen length regulator;Dbxref=GO:0004713,GO:0005886,GO:0009103,GO:0015620,GO:0015685,GO:0016020;gene=fepE;Parent=GCA000010485_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3765,COG:M,RefSeq:WP_000096761.1,SO:0001217,UniParc:UPI0001C22992,UniRef:UniRef100_A0A7I0KSU2,UniRef:UniRef50_P26266,UniRef:UniRef90_P26266,VFDB:VFC0272,VFDB:VFG000927
contig_1	Pyrodigal	gene	592954	593769	.	-	.	ID=GCA000010485_00565_gene;locus_tag=GCA000010485_00565;gene=fepC
contig_1	Pyrodigal	CDS	592954	593769	.	-	0	ID=GCA000010485_00565;Name=ferrienterobactin ABC transporter ATPase;locus_tag=GCA000010485_00565;product=ferrienterobactin ABC transporter ATPase;Dbxref=GO:0005524,GO:0005886,GO:0015620,GO:0015685,GO:0016020,GO:0016887,GO:0033212,GO:0055052;gene=fepC;Parent=GCA000010485_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_000140634.1,SO:0001217,UniParc:UPI00000DE856,UniRef:UniRef100_E2QHF0,UniRef:UniRef50_P23878,UniRef:UniRef90_P23878,VFDB:VFC0272,VFDB:VFG000925;ec_number=7.2.2.17
contig_1	Pyrodigal	gene	593766	594758	.	-	.	ID=GCA000010485_00566_gene;locus_tag=GCA000010485_00566;gene=fepG
contig_1	Pyrodigal	CDS	593766	594758	.	-	0	ID=GCA000010485_00566;Name=iron-enterobactin ABC transporter permease;locus_tag=GCA000010485_00566;product=iron-enterobactin ABC transporter permease;Dbxref=GO:0005886,GO:0015620,GO:0015685,GO:0016020,GO:0022857,GO:0033212,GO:0033214,GO:0055052;gene=fepG;Parent=GCA000010485_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4779,COG:P,RefSeq:WP_000640932.1,SO:0001217,UniParc:UPI0001C22993,UniRef:UniRef100_A0A061KSK2,UniRef:UniRef50_P23877,UniRef:UniRef90_P23877,VFDB:VFC0272,VFDB:VFG000928;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	594755	595759	.	-	.	ID=GCA000010485_00567_gene;locus_tag=GCA000010485_00567;gene=fepD
contig_1	Pyrodigal	CDS	594755	595759	.	-	0	ID=GCA000010485_00567;Name=ferrienterobactin ABC transporter permease;locus_tag=GCA000010485_00567;product=ferrienterobactin ABC transporter permease;Dbxref=GO:0005886,GO:0015620,GO:0015685,GO:0016020,GO:0022857,GO:0033212,GO:0033214,GO:0055052;gene=fepD;Parent=GCA000010485_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_001295850.1,SO:0001217,UniParc:UPI000187BA3F,UniRef:UniRef100_A0A061KQL4,UniRef:UniRef50_P23876,UniRef:UniRef90_P23876,VFDB:VFC0272,VFDB:VFG000926;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	595870	597120	.	+	.	ID=GCA000010485_00568_gene;locus_tag=GCA000010485_00568;gene=entS
contig_1	Pyrodigal	CDS	595870	597120	.	+	0	ID=GCA000010485_00568;Name=enterobactin exporter%2C iron-regulated;locus_tag=GCA000010485_00568;product=enterobactin exporter%2C iron-regulated;Dbxref=GO:0005886,GO:0042930,GO:0042931;gene=entS;Parent=GCA000010485_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08225,RefSeq:WP_001041760.1,SO:0001217,UniParc:UPI000187BA40,UniRef:UniRef100_B7UKN4,UniRef:UniRef50_P24077,UniRef:UniRef90_P24077,VFDB:VFC0272,VFDB:VFG044165
contig_1	Pyrodigal	gene	597124	598080	.	-	.	ID=GCA000010485_00569_gene;locus_tag=GCA000010485_00569;gene=fepB
contig_1	Pyrodigal	CDS	597124	598080	.	-	0	ID=GCA000010485_00569;Name=ferrienterobactin ABC transporter periplasmic binding protein;locus_tag=GCA000010485_00569;product=ferrienterobactin ABC transporter periplasmic binding protein;Dbxref=GO:0006974,GO:0015685,GO:0016020,GO:0030288,GO:0033212,GO:0055052;gene=fepB;Parent=GCA000010485_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4592,COG:P,RefSeq:WP_001234311.1,SO:0001217,UniParc:UPI000012A648,UniRef:UniRef100_P0AEL6,UniRef:UniRef50_P0AEL6,UniRef:UniRef90_P0AEL6,VFDB:VFC0272,VFDB:VFG000924;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	598269	599444	.	+	.	ID=GCA000010485_00570_gene;locus_tag=GCA000010485_00570;gene=entC
contig_1	Pyrodigal	CDS	598269	599444	.	+	0	ID=GCA000010485_00570;Name=isochorismate synthase 1;locus_tag=GCA000010485_00570;product=isochorismate synthase 1;Dbxref=GO:0000287,GO:0008909,GO:0009239;gene=entC;Parent=GCA000010485_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,RefSeq:WP_001298341.1,SO:0001217,UniParc:UPI0000DACD72,UniRef:UniRef100_A0A0D6I7A5,UniRef:UniRef50_P0AEJ2,UniRef:UniRef90_P0AEJ2,VFDB:VFC0272,VFDB:VFG000931;ec_number=5.4.4.2
contig_1	Pyrodigal	gene	599454	601064	.	+	.	ID=GCA000010485_00571_gene;locus_tag=GCA000010485_00571;gene=entE
contig_1	Pyrodigal	CDS	599454	601064	.	+	0	ID=GCA000010485_00571;Name=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;locus_tag=GCA000010485_00571;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;Dbxref=GO:0005524,GO:0005829,GO:0008668,GO:0009239,GO:0016020,GO:0016746,GO:0019290,GO:0047527;gene=entE;Parent=GCA000010485_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000026784,BlastRules:WP_001222445,COG:COG1021,COG:Q,RefSeq:WP_000026838.1,SO:0001217,UniParc:UPI0001C229B5,UniRef:UniRef100_A0A7I0KSU1,UniRef:UniRef50_P10378,UniRef:UniRef90_P10378;ec_number=6.3.2.14
contig_1	Pyrodigal	gene	601078	601935	.	+	.	ID=GCA000010485_00572_gene;locus_tag=GCA000010485_00572;gene=entB
contig_1	Pyrodigal	CDS	601078	601935	.	+	0	ID=GCA000010485_00572;Name=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;locus_tag=GCA000010485_00572;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;Dbxref=GO:0000287,GO:0005737,GO:0008908,GO:0009239,GO:0047527;gene=entB;Parent=GCA000010485_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001007138,BlastRules:WP_004210873,COG:COG3433,COG:IQ,KEGG:K01252,RefSeq:WP_001007138.1,SO:0001217,UniParc:UPI0000129FCB,UniRef:UniRef100_P0ADI4,UniRef:UniRef50_P0ADI4,UniRef:UniRef90_P0ADI4;ec_number=6.3.2.14
contig_1	Pyrodigal	gene	601935	602681	.	+	.	ID=GCA000010485_00573_gene;locus_tag=GCA000010485_00573;gene=entA
contig_1	Pyrodigal	CDS	601935	602681	.	+	0	ID=GCA000010485_00573;Name=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;locus_tag=GCA000010485_00573;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;Dbxref=GO:0008667,GO:0019290;gene=entA;Parent=GCA000010485_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000347643.1,SO:0001217,UniParc:UPI0001C229B6,UniRef:UniRef100_A0A066T6A8,UniRef:UniRef50_A0A1I2JBK4,UniRef:UniRef90_C3TK22,VFDB:VFC0272,VFDB:VFG000934;ec_number=1.3.1.28
contig_1	Pyrodigal	gene	602684	603097	.	+	.	ID=GCA000010485_00574_gene;locus_tag=GCA000010485_00574;gene=entH
contig_1	Pyrodigal	CDS	602684	603097	.	+	0	ID=GCA000010485_00574;Name=proofreading thioesterase EntH;locus_tag=GCA000010485_00574;product=proofreading thioesterase EntH;Dbxref=GO:0005829,GO:0009239,GO:0061522;gene=entH;Parent=GCA000010485_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,KEGG:K24147,RefSeq:WP_000637953.1,SO:0001217,UniParc:UPI000013A2E9,UniRef:UniRef100_P0A8Y8,UniRef:UniRef50_P0A8Y8,UniRef:UniRef90_P0A8Y8;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	603278	605383	.	+	.	ID=GCA000010485_00575_gene;locus_tag=GCA000010485_00575;gene=cstA
contig_1	Pyrodigal	CDS	603278	605383	.	+	0	ID=GCA000010485_00575;Name=pyruvate/proton symporter CstA;locus_tag=GCA000010485_00575;product=pyruvate/proton symporter CstA;Dbxref=GO:0005477,GO:0005886,GO:0006849,GO:0009267,GO:0015031,GO:0015833,GO:0031669;gene=cstA;Parent=GCA000010485_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG1966,RefSeq:WP_001043115.1,SO:0001217,UniParc:UPI0001C229B7,UniRef:UniRef100_A0A061YBH1,UniRef:UniRef50_P39396,UniRef:UniRef90_P15078
contig_1	Pyrodigal	gene	605496	605693	.	+	.	ID=GCA000010485_00576_gene;locus_tag=GCA000010485_00576;gene=ybdD
contig_1	Pyrodigal	CDS	605496	605693	.	+	0	ID=GCA000010485_00576;Name=putative protein YbdD;locus_tag=GCA000010485_00576;product=putative protein YbdD;gene=ybdD;Parent=GCA000010485_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2879,COG:S,RefSeq:WP_000460431.1,SO:0001217,UniParc:UPI000013A2EA,UniRef:UniRef100_P0AAS9,UniRef:UniRef50_P0AAS9,UniRef:UniRef90_P0AAS9
contig_1	Pyrodigal	gene	605703	606791	.	-	.	ID=GCA000010485_00577_gene;locus_tag=GCA000010485_00577;gene=hcxA
contig_1	Pyrodigal	CDS	605703	606791	.	-	0	ID=GCA000010485_00577;Name=hydroxycarboxylate dehydrogenase HcxA;locus_tag=GCA000010485_00577;product=hydroxycarboxylate dehydrogenase HcxA;Dbxref=GO:0016491,GO:0016616,GO:0042802,GO:0046872,GO:0047545;gene=hcxA;Parent=GCA000010485_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001120441,COG:C,COG:COG0371,RefSeq:WP_001120421.1,SO:0001217,UniParc:UPI0001C229B8,UniRef:UniRef100_A0A7I0KST1,UniRef:UniRef50_P45579,UniRef:UniRef90_P45579;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	606900	608060	.	+	.	ID=GCA000010485_00578_gene;locus_tag=GCA000010485_00578;gene=ybdL
contig_1	Pyrodigal	CDS	606900	608060	.	+	0	ID=GCA000010485_00578;Name=methionine-oxo-acid transaminase;locus_tag=GCA000010485_00578;product=methionine-oxo-acid transaminase;Dbxref=GO:0005737,GO:0009058,GO:0010326,GO:0016212,GO:0030170,GO:0042803;gene=ybdL;Parent=GCA000010485_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000183907,RefSeq:WP_000183945.1,SO:0001217,UniParc:UPI0001C229B9,UniRef:UniRef100_A0A3L4RNX4,UniRef:UniRef50_P77806,UniRef:UniRef90_P77806;ec_number=2.6.1.88
contig_1	Pyrodigal	gene	608061	608690	.	-	.	ID=GCA000010485_00579_gene;locus_tag=GCA000010485_00579;gene=ybdM
contig_1	Pyrodigal	CDS	608061	608690	.	-	0	ID=GCA000010485_00579;Name=putative protein YbdM;locus_tag=GCA000010485_00579;product=putative protein YbdM;Dbxref=GO:0071453;gene=ybdM;Parent=GCA000010485_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000502950.1,SO:0001217,UniParc:UPI000209C5BB,UniRef:UniRef100_A0A1U9U1J5,UniRef:UniRef50_P77174,UniRef:UniRef90_P77174
contig_1	Pyrodigal	gene	608663	609883	.	-	.	ID=GCA000010485_00580_gene;locus_tag=GCA000010485_00580;gene=ybdN
contig_1	Pyrodigal	CDS	608663	609883	.	-	0	ID=GCA000010485_00580;Name=putative protein YbdN;locus_tag=GCA000010485_00580;product=putative protein YbdN;Dbxref=GO:0003824,GO:0071453;gene=ybdN;Parent=GCA000010485_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000029775.1,SO:0001217,UniParc:UPI0001C229BB,UniRef:UniRef100_A0A7I0KT31,UniRef:UniRef50_P77216,UniRef:UniRef90_P77216
contig_1	Pyrodigal	gene	610030	610932	.	-	.	ID=GCA000010485_00581_gene;locus_tag=GCA000010485_00581;gene=citR
contig_1	Pyrodigal	CDS	610030	610932	.	-	0	ID=GCA000010485_00581;Name=DNA-binding transcriptional repressor CitR;locus_tag=GCA000010485_00581;product=DNA-binding transcriptional repressor CitR;Dbxref=GO:0003700,GO:0006355;gene=citR;Parent=GCA000010485_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295853.1,SO:0001217,UniParc:UPI0001C229BC,UniRef:UniRef100_A0A061KSI9,UniRef:UniRef50_P77746,UniRef:UniRef90_B7MF17
contig_1	Pyrodigal	gene	611137	611883	.	-	.	ID=GCA000010485_00582_gene;locus_tag=GCA000010485_00582;gene=dsbG
contig_1	Pyrodigal	CDS	611137	611883	.	-	0	ID=GCA000010485_00582;Name=thiol:disulfide interchange protein DsbG;locus_tag=GCA000010485_00582;product=thiol:disulfide interchange protein DsbG;Dbxref=GO:0003756,GO:0030288,GO:0042803,GO:0061077;gene=dsbG;Parent=GCA000010485_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03805,RefSeq:WP_001295854.1,SO:0001217,UniParc:UPI0001C229BD,UniRef:UniRef100_A0A061KQK1,UniRef:UniRef50_P77202,UniRef:UniRef90_P77202;ec_number=1.8.4.-
contig_1	Pyrodigal	gene	612255	612818	.	+	.	ID=GCA000010485_00583_gene;locus_tag=GCA000010485_00583;gene=ahpC
contig_1	Pyrodigal	CDS	612255	612818	.	+	0	ID=GCA000010485_00583;Name=alkyl hydroperoxide reductase subunit C;locus_tag=GCA000010485_00583;product=alkyl hydroperoxide reductase subunit C;Dbxref=GO:0004601,GO:0005737,GO:0005829,GO:0006979,GO:0008379,GO:0009321,GO:0009970,GO:0016020,GO:0016684,GO:0019290,GO:0032843,GO:0033194,GO:0033195,GO:0042744,GO:0042802,GO:0045454,GO:0102039;gene=ahpC;Parent=GCA000010485_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0450,COG:V,KEGG:K24119,RefSeq:WP_000052796.1,SO:0001217,UniParc:UPI000016397D,UniRef:UniRef100_P0AE08,UniRef:UniRef50_P0AE08,UniRef:UniRef90_P0AE08;ec_number=1.11.1.26
contig_1	Pyrodigal	gene	612959	614554	.	+	.	ID=GCA000010485_00584_gene;locus_tag=GCA000010485_00584
contig_1	Pyrodigal	CDS	612959	614554	.	+	0	ID=GCA000010485_00584;Name=Alkyl hydroperoxide reductase subunit F;locus_tag=GCA000010485_00584;product=Alkyl hydroperoxide reductase subunit F;Parent=GCA000010485_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000209C5BD,UniRef:UniRef100_F4SVC8,UniRef:UniRef90_P19480
contig_1	Pyrodigal	gene	614675	615103	.	-	.	ID=GCA000010485_00585_gene;locus_tag=GCA000010485_00585;gene=uspG
contig_1	Pyrodigal	CDS	614675	615103	.	-	0	ID=GCA000010485_00585;Name=universal stress protein UspG;locus_tag=GCA000010485_00585;product=universal stress protein UspG;Dbxref=GO:0004017,GO:0004672,GO:0005737,GO:0006950,GO:0042803,GO:0070733,GO:1902021;gene=uspG;Parent=GCA000010485_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_001295855.1,SO:0001217,UniParc:UPI000021FCB1,UniRef:UniRef100_Q8FK07,UniRef:UniRef50_P39177,UniRef:UniRef90_P39177
contig_1	Bakta	gene	615227	615316	.	-	.	ID=GCA000010485_00586_gene;locus_tag=GCA000010485_00586;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	615227	615316	.	-	0	ID=GCA000010485_00586;Name=Potassium-transporting ATPase subunit F;locus_tag=GCA000010485_00586;product=Potassium-transporting ATPase subunit F;Parent=GCA000010485_00586_gene;Note=RefSeq:WP_001287361.1,SO:0001217,UniParc:UPI000245E4D9,UniRef:UniRef100_A0A0J2FBB1,UniRef:UniRef50_A0A7Z8ZNV6,UniRef:UniRef90_A0A7Z8ZNV6
contig_1	Pyrodigal	gene	615459	615869	.	-	.	ID=GCA000010485_00587_gene;locus_tag=GCA000010485_00587;gene=rnk
contig_1	Pyrodigal	CDS	615459	615869	.	-	0	ID=GCA000010485_00587;Name=nucleoside diphosphate kinase regulator;locus_tag=GCA000010485_00587;product=nucleoside diphosphate kinase regulator;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=rnk;Parent=GCA000010485_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06140,RefSeq:WP_000089731.1,SO:0001217,UniParc:UPI000013440B,UniRef:UniRef100_P0AFW4,UniRef:UniRef50_P0AFW4,UniRef:UniRef90_P0AFW4
contig_1	Infernal	regulatory_region	615915	616023	2.9e-21	-	.	ID=EFPPCJGBKI_289;Name=Enterobacteria rnk leader;product=Enterobacteria rnk leader;Dbxref=RFAM:RF01771;inference=profile:Rfam:RF01771;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	616099	616905	.	-	.	ID=GCA000010485_00588_gene;locus_tag=GCA000010485_00588;gene=rna
contig_1	Pyrodigal	CDS	616099	616905	.	-	0	ID=GCA000010485_00588;Name=ribonuclease I;locus_tag=GCA000010485_00588;product=ribonuclease I;Dbxref=GO:0003723,GO:0005737,GO:0006401,GO:0008847,GO:0030288,GO:0033897;gene=rna;Parent=GCA000010485_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01169,RefSeq:WP_001295857.1,SO:0001217,UniParc:UPI00005F29D4,UniRef:UniRef100_A0A023KLI4,UniRef:UniRef50_P21338,UniRef:UniRef90_P21338;ec_number=4.6.1.21
contig_1	Pyrodigal	gene	617019	618482	.	-	.	ID=GCA000010485_00589_gene;locus_tag=GCA000010485_00589;gene=citT
contig_1	Pyrodigal	CDS	617019	618482	.	-	0	ID=GCA000010485_00589;Name=citrate/succinate antiporter CitT;locus_tag=GCA000010485_00589;product=citrate/succinate antiporter CitT;Dbxref=GO:0005886,GO:0015297;gene=citT;Parent=GCA000010485_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000050323,RefSeq:WP_000050328.1,SO:0001217,UniParc:UPI00000DE868,UniRef:UniRef100_E2QHH3,UniRef:UniRef50_P0AE74,UniRef:UniRef90_P0AE74
contig_1	Pyrodigal	gene	618533	619411	.	-	.	ID=GCA000010485_00590_gene;locus_tag=GCA000010485_00590;gene=citG
contig_1	Pyrodigal	CDS	618533	619411	.	-	0	ID=GCA000010485_00590;Name=triphosphoribosyl-dephospho-CoA synthase CitG;locus_tag=GCA000010485_00590;product=triphosphoribosyl-dephospho-CoA synthase CitG;Dbxref=GO:0005524,GO:0046917,GO:0051191;gene=citG;Parent=GCA000010485_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062475.1,SO:0001217,UniParc:UPI0001C229BF,UniRef:UniRef100_A0A061YEY3,UniRef:UniRef50_P77231,UniRef:UniRef90_P77231;ec_number=2.4.2.52
contig_1	Pyrodigal	gene	619386	619937	.	-	.	ID=GCA000010485_00591_gene;locus_tag=GCA000010485_00591;gene=citX
contig_1	Pyrodigal	CDS	619386	619937	.	-	0	ID=GCA000010485_00591;Name=Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;locus_tag=GCA000010485_00591;product=Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;Dbxref=GO:0050519,GO:0051191;gene=citX;Parent=GCA000010485_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000550407.1,SO:0001217,UniParc:UPI00000DE86A,UniRef:UniRef100_Q8FK03,UniRef:UniRef50_P0A6G5,UniRef:UniRef90_P0A6G5;ec_number=2.7.7.61
contig_1	Pyrodigal	gene	619941	621473	.	-	.	ID=GCA000010485_00592_gene;locus_tag=GCA000010485_00592;gene=citF
contig_1	Pyrodigal	CDS	619941	621473	.	-	0	ID=GCA000010485_00592;Name=citrate lyase subunit alpha;locus_tag=GCA000010485_00592;product=citrate lyase subunit alpha;Dbxref=GO:0005737,GO:0006084,GO:0006101,GO:0006113,GO:0008814,GO:0008815,GO:0009346;gene=citF;Parent=GCA000010485_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01643,RefSeq:WP_001295860.1,SO:0001217,UniParc:UPI0001C229C0,UniRef:UniRef100_A0A066T658,UniRef:UniRef50_P75726,UniRef:UniRef90_P75726;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	621484	622392	.	-	.	ID=GCA000010485_00593_gene;locus_tag=GCA000010485_00593;gene=citE
contig_1	Pyrodigal	CDS	621484	622392	.	-	0	ID=GCA000010485_00593;Name=citrate (pro-3S)-lyase subunit beta;locus_tag=GCA000010485_00593;product=citrate (pro-3S)-lyase subunit beta;Dbxref=GO:0000287,GO:0005737,GO:0006084,GO:0006101,GO:0006107,GO:0006113,GO:0008815,GO:0008816,GO:0009346;gene=citE;Parent=GCA000010485_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000622357.1,SO:0001217,UniParc:UPI00001279B9,UniRef:UniRef100_P0A9I1,UniRef:UniRef50_P0A9I1,UniRef:UniRef90_P0A9I1;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	622389	622685	.	-	.	ID=GCA000010485_00594_gene;locus_tag=GCA000010485_00594;gene=citD
contig_1	Pyrodigal	CDS	622389	622685	.	-	0	ID=GCA000010485_00594;Name=citrate lyase acyl carrier protein 1;locus_tag=GCA000010485_00594;product=citrate lyase acyl carrier protein 1;Dbxref=GO:0005737,GO:0006113,GO:0008815,GO:0009346;gene=citD;Parent=GCA000010485_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000700679,RefSeq:WP_000700703.1,SO:0001217,UniParc:UPI00001279BD,UniRef:UniRef100_P69330,UniRef:UniRef50_P69330,UniRef:UniRef90_P69330;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	622700	623758	.	-	.	ID=GCA000010485_00595_gene;locus_tag=GCA000010485_00595;gene=citC
contig_1	Pyrodigal	CDS	622700	623758	.	-	0	ID=GCA000010485_00595;Name=[citrate (pro-3S)-lyase] ligase;locus_tag=GCA000010485_00595;product=[citrate (pro-3S)-lyase] ligase;Dbxref=GO:0005524,GO:0006101,GO:0008771,GO:0009058,GO:0016747;gene=citC;Parent=GCA000010485_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01910,RefSeq:WP_000467705.1,SO:0001217,UniParc:UPI0000127A3B,UniRef:UniRef100_P77390,UniRef:UniRef50_P77390,UniRef:UniRef90_P77390;ec_number=6.2.1.22
contig_1	Pyrodigal	gene	624138	625796	.	+	.	ID=GCA000010485_00596_gene;locus_tag=GCA000010485_00596;gene=dpiB
contig_1	Pyrodigal	CDS	624138	625796	.	+	0	ID=GCA000010485_00596;Name=sensor histidine kinase DpiB;locus_tag=GCA000010485_00596;product=sensor histidine kinase DpiB;Dbxref=GO:0000155,GO:0000160,GO:0004673,GO:0005524,GO:0005829,GO:0005886,GO:0006355,GO:0009927,GO:0030288;gene=dpiB;Parent=GCA000010485_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000939762.1,SO:0001217,UniParc:UPI0001C229C2,UniRef:UniRef100_A0A066T1Z7,UniRef:UniRef50_P77510,UniRef:UniRef90_P77510;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	625765	626445	.	+	.	ID=GCA000010485_00597_gene;locus_tag=GCA000010485_00597;gene=dpiA
contig_1	Pyrodigal	CDS	625765	626445	.	+	0	ID=GCA000010485_00597;Name=two-component response regulator DpiA;locus_tag=GCA000010485_00597;product=two-component response regulator DpiA;Dbxref=GO:0000156,GO:0003677,GO:0003700,GO:0005737;gene=dpiA;Parent=GCA000010485_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07702,RefSeq:WP_000126500.1,SO:0001217,UniParc:UPI000012974E,UniRef:UniRef100_P0AEF4,UniRef:UniRef50_P0AEF4,UniRef:UniRef90_P0AEF4
contig_1	Pyrodigal	gene	626486	627871	.	-	.	ID=GCA000010485_00598_gene;locus_tag=GCA000010485_00598;gene=dcuC
contig_1	Pyrodigal	CDS	626486	627871	.	-	0	ID=GCA000010485_00598;Name=anaerobic C4-dicarboxylate transporter DcuC;locus_tag=GCA000010485_00598;product=anaerobic C4-dicarboxylate transporter DcuC;Dbxref=GO:0005886,GO:0015297,GO:0015556,GO:0015740;gene=dcuC;Parent=GCA000010485_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3069,KEGG:K03326,RefSeq:WP_000955057.1,SO:0001217,UniParc:UPI00000DE86F,UniRef:UniRef100_Q8FJZ8,UniRef:UniRef50_P0ABP3,UniRef:UniRef90_P0ABP3
contig_1	Pyrodigal	gene	628458	629018	.	+	.	ID=GCA000010485_00599_gene;locus_tag=GCA000010485_00599;gene=pagP
contig_1	Pyrodigal	CDS	628458	629018	.	+	0	ID=GCA000010485_00599;Name=lipid IV(A) palmitoyltransferase PagP;locus_tag=GCA000010485_00599;product=lipid IV(A) palmitoyltransferase PagP;Dbxref=GO:0009245,GO:0009279,GO:0016746;gene=pagP;Parent=GCA000010485_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001103094,BlastRules:WP_001784638,RefSeq:WP_001103088.1,SO:0001217,UniParc:UPI00000DE870,UniRef:UniRef100_Q8FJZ7,UniRef:UniRef50_P37001,UniRef:UniRef90_P37001;ec_number=2.3.1.251
contig_1	Infernal	regulatory_region	629023	629450	1.9e-13	+	.	ID=EFPPCJGBKI_309;Name=cspA thermoregulator;product=cspA thermoregulator;Dbxref=RFAM:RF01766;inference=profile:Rfam:RF01766;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	629193	629402	.	+	.	ID=GCA000010485_00600_gene;locus_tag=GCA000010485_00600;gene=cspE
contig_1	Pyrodigal	CDS	629193	629402	.	+	0	ID=GCA000010485_00600;Name=transcription antiterminator/RNA stability regulator CspE;locus_tag=GCA000010485_00600;product=transcription antiterminator/RNA stability regulator CspE;Dbxref=GO:0003677,GO:0005829;gene=cspE;Parent=GCA000010485_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000034825,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_000034825.1,SO:0001217,UniParc:UPI000000023B,UniRef:UniRef100_P0A972,UniRef:UniRef50_P0A972,UniRef:UniRef90_P0A972
contig_1	Pyrodigal	gene	629456	629839	.	-	.	ID=GCA000010485_00601_gene;locus_tag=GCA000010485_00601;gene=crcB
contig_1	Pyrodigal	CDS	629456	629839	.	-	0	ID=GCA000010485_00601;Name=fluoride efflux transporter CrcB;locus_tag=GCA000010485_00601;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0016020,GO:0046872,GO:0062054,GO:0140114;gene=crcB;Parent=GCA000010485_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_000939738.1,SO:0001217,UniParc:UPI00001283ED,UniRef:UniRef100_A7ZJ12,UniRef:UniRef50_P37002,UniRef:UniRef90_P37002
contig_1	Pyrodigal	gene	629932	630720	.	+	.	ID=GCA000010485_00602_gene;locus_tag=GCA000010485_00602;gene=tatE
contig_1	Pyrodigal	CDS	629932	630720	.	+	0	ID=GCA000010485_00602;Name=deaminated glutathione amidase;locus_tag=GCA000010485_00602;product=deaminated glutathione amidase;Dbxref=GO:0008320,GO:0033281,GO:0043953;gene=tatE;Parent=GCA000010485_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_001295861.1,SO:0001217,UniParc:UPI0001C229C3,UniRef:UniRef100_A0A061YIP9,UniRef:UniRef50_P0A843,UniRef:UniRef90_P0A843;ec_number=3.5.1.128
contig_1	Pyrodigal	gene	630849	631052	.	+	.	ID=GCA000010485_00603_gene;locus_tag=GCA000010485_00603;gene=tatE
contig_1	Pyrodigal	CDS	630849	631052	.	+	0	ID=GCA000010485_00603;Name=deaminated glutathione amidase;locus_tag=GCA000010485_00603;product=deaminated glutathione amidase;Dbxref=GO:0008320,GO:0033281,GO:0043953;gene=tatE;Parent=GCA000010485_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_000503931.1,SO:0001217,UniParc:UPI00000540BB,UniRef:UniRef100_P0A843,UniRef:UniRef50_P0A843,UniRef:UniRef90_P0A843;ec_number=3.5.1.128
contig_1	Pyrodigal	gene	631152	632117	.	-	.	ID=GCA000010485_00604_gene;locus_tag=GCA000010485_00604;gene=lipA
contig_1	Pyrodigal	CDS	631152	632117	.	-	0	ID=GCA000010485_00604;Name=lipoyl synthase;locus_tag=GCA000010485_00604;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000010485_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_000042632.1,SO:0001217,UniParc:UPI000012E6C7,UniRef:UniRef100_P60716,UniRef:UniRef50_P60716,UniRef:UniRef90_P60716;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	632349	632882	.	-	.	ID=GCA000010485_00605_gene;locus_tag=GCA000010485_00605;gene=lysR
contig_1	Pyrodigal	CDS	632349	632882	.	-	0	ID=GCA000010485_00605;Name=LysR family transcriptional regulator;locus_tag=GCA000010485_00605;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000010485_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C229C4,UniRef:UniRef100_A0AA36KVH5,UniRef:UniRef50_A0A485CK26,UniRef:UniRef90_A0A366YWS9
contig_1	Pyrodigal	gene	633142	633783	.	-	.	ID=GCA000010485_00606_gene;locus_tag=GCA000010485_00606;gene=lipB
contig_1	Pyrodigal	CDS	633142	633783	.	-	0	ID=GCA000010485_00606;Name=lipoyl(octanoyl) transferase LipB;locus_tag=GCA000010485_00606;product=lipoyl(octanoyl) transferase LipB;Dbxref=GO:0005737,GO:0009249,GO:0033819;gene=lipB;Parent=GCA000010485_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0321,COG:H,RefSeq:WP_000284040.1,SO:0001217,UniParc:UPI0001888017,UniRef:UniRef100_B7NLY9,UniRef:UniRef50_P60720,UniRef:UniRef90_P60720;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	633884	634147	.	-	.	ID=GCA000010485_00607_gene;locus_tag=GCA000010485_00607;gene=ybeD
contig_1	Pyrodigal	CDS	633884	634147	.	-	0	ID=GCA000010485_00607;Name=DUF493 domain-containing protein;locus_tag=GCA000010485_00607;product=DUF493 domain-containing protein;Dbxref=GO:0005829;gene=ybeD;Parent=GCA000010485_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2921,COG:T,RefSeq:WP_000850550.1,SO:0001217,UniParc:UPI000013A2FF,UniRef:UniRef100_P0A8J4,UniRef:UniRef50_P0A8J4,UniRef:UniRef90_P0A8J4
contig_1	Pyrodigal	gene	634257	635468	.	-	.	ID=GCA000010485_00608_gene;locus_tag=GCA000010485_00608;gene=dacA
contig_1	Pyrodigal	CDS	634257	635468	.	-	0	ID=GCA000010485_00608;Name=D-alanyl-D-alanine carboxypeptidase DacA;locus_tag=GCA000010485_00608;product=D-alanyl-D-alanine carboxypeptidase DacA;Dbxref=GO:0000270,GO:0004180,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008800,GO:0009002,GO:0009252,GO:0030288,GO:0042803,GO:0051301,GO:0071555;gene=dacA;Parent=GCA000010485_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,KEGG:K07258,RefSeq:WP_001092082.1,SO:0001217,UniParc:UPI0000128DD7,UniRef:UniRef100_P0AEB2,UniRef:UniRef50_P0AEB2,UniRef:UniRef90_P0AEB2;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	635608	636696	.	-	.	ID=GCA000010485_00609_gene;locus_tag=GCA000010485_00609;gene=rlpA
contig_1	Pyrodigal	CDS	635608	636696	.	-	0	ID=GCA000010485_00609;Name=endolytic peptidoglycan transglycosylase RlpA;locus_tag=GCA000010485_00609;product=endolytic peptidoglycan transglycosylase RlpA;Dbxref=GO:0000270,GO:0005886,GO:0008932,GO:0009279,GO:0042834,GO:0043093,GO:0071555;gene=rlpA;Parent=GCA000010485_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3087,COG:D,KEGG:K03642,RefSeq:WP_001231421.1,SO:0001217,UniParc:UPI00000E49B3,UniRef:UniRef100_E2QHJ3,UniRef:UniRef50_P10100,UniRef:UniRef90_P10100;ec_number=4.2.2.-
contig_1	Pyrodigal	gene	636707	637819	.	-	.	ID=GCA000010485_00610_gene;locus_tag=GCA000010485_00610;gene=mrdB
contig_1	Pyrodigal	CDS	636707	637819	.	-	0	ID=GCA000010485_00610;Name=peptidoglycan glycosyltransferase MrdB;locus_tag=GCA000010485_00610;product=peptidoglycan glycosyltransferase MrdB;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0015648,GO:0032153,GO:0051301,GO:0071555;gene=mrdB;Parent=GCA000010485_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_000131717.1,SO:0001217,UniParc:UPI0000D5071A,UniRef:UniRef100_E2QHJ4,UniRef:UniRef50_P0ABG7,UniRef:UniRef90_P0ABG7;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	637822	639723	.	-	.	ID=GCA000010485_00611_gene;locus_tag=GCA000010485_00611;gene=mrdA
contig_1	Pyrodigal	CDS	637822	639723	.	-	0	ID=GCA000010485_00611;Name=peptidoglycan DD-transpeptidase MrdA;locus_tag=GCA000010485_00611;product=peptidoglycan DD-transpeptidase MrdA;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0009002,GO:0009252,GO:0016020,GO:0030288,GO:0046677,GO:0071555,GO:0071972;gene=mrdA;Parent=GCA000010485_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K05515,RefSeq:WP_000776191.1,SO:0001217,UniParc:UPI0000131389,UniRef:UniRef100_P0AD65,UniRef:UniRef50_P0AD65,UniRef:UniRef90_P0AD65;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	639754	640221	.	-	.	ID=GCA000010485_00612_gene;locus_tag=GCA000010485_00612;gene=rlmH
contig_1	Pyrodigal	CDS	639754	640221	.	-	0	ID=GCA000010485_00612;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA000010485_00612;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA000010485_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,RefSeq:WP_000776104.1,SO:0001217,UniParc:UPI000013A2FB,UniRef:UniRef100_P0A8I8,UniRef:UniRef50_P0A8I8,UniRef:UniRef90_P0A8I8;ec_number=2.1.1.177
contig_1	Pyrodigal	gene	640225	640542	.	-	.	ID=GCA000010485_00613_gene;locus_tag=GCA000010485_00613;gene=rsfS
contig_1	Pyrodigal	CDS	640225	640542	.	-	0	ID=GCA000010485_00613;Name=ribosome silencing factor;locus_tag=GCA000010485_00613;product=ribosome silencing factor;Dbxref=GO:0005737,GO:0017148,GO:0042256,GO:0043022,GO:0043023,GO:0090071;gene=rsfS;Parent=GCA000010485_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_001161664.1,SO:0001217,UniParc:UPI000013A2FC,UniRef:UniRef100_P0AAT6,UniRef:UniRef50_P0AAT6,UniRef:UniRef90_P0AAT6
contig_1	Pyrodigal	gene	640802	641413	.	-	.	ID=GCA000010485_00614_gene;locus_tag=GCA000010485_00614;gene=cobC
contig_1	Pyrodigal	CDS	640802	641413	.	-	0	ID=GCA000010485_00614;Name=adenosylcobalamin/alpha-ribazole phosphatase;locus_tag=GCA000010485_00614;product=adenosylcobalamin/alpha-ribazole phosphatase;Dbxref=GO:0005737,GO:0009236,GO:0016791,GO:0043755;gene=cobC;Parent=GCA000010485_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295864.1,SO:0001217,UniParc:UPI0001C229FD,UniRef:UniRef100_A0A066SXX1,UniRef:UniRef50_P39701,UniRef:UniRef90_P52086;ec_number=3.1.3.73
contig_1	Pyrodigal	gene	641437	642078	.	-	.	ID=GCA000010485_00615_gene;locus_tag=GCA000010485_00615;gene=nadD
contig_1	Pyrodigal	CDS	641437	642078	.	-	0	ID=GCA000010485_00615;Name=nicotinate-nucleotide adenylyltransferase;locus_tag=GCA000010485_00615;product=nicotinate-nucleotide adenylyltransferase;Dbxref=GO:0004515,GO:0005524,GO:0009435,GO:0016779;gene=nadD;Parent=GCA000010485_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1057,COG:H,RefSeq:WP_000838881.1,SO:0001217,UniParc:UPI00001BBB5D,UniRef:UniRef100_Q8FJZ1,UniRef:UniRef50_P0A752,UniRef:UniRef90_P0A752;ec_number=2.7.7.18
contig_1	Pyrodigal	gene	642080	643111	.	-	.	ID=GCA000010485_00616_gene;locus_tag=GCA000010485_00616;gene=holA
contig_1	Pyrodigal	CDS	642080	643111	.	-	0	ID=GCA000010485_00616;Name=DNA polymerase III subunit delta;locus_tag=GCA000010485_00616;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003689,GO:0003887,GO:0006260,GO:0006261,GO:0009360,GO:0030894,GO:0043846;gene=holA;Parent=GCA000010485_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_000620539.1,SO:0001217,UniParc:UPI0001887112,UniRef:UniRef100_E2QHK0,UniRef:UniRef50_P28630,UniRef:UniRef90_P28630;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	643111	643692	.	-	.	ID=GCA000010485_00617_gene;locus_tag=GCA000010485_00617;gene=lptE
contig_1	Pyrodigal	CDS	643111	643692	.	-	0	ID=GCA000010485_00617;Name=LPS assembly lipoprotein LptE;locus_tag=GCA000010485_00617;product=LPS assembly lipoprotein LptE;Dbxref=GO:0001530,GO:0009279,GO:0015920,GO:0019867,GO:0043165,GO:1990351;gene=lptE;Parent=GCA000010485_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2980,COG:M,KEGG:K03643,RefSeq:WP_001269673.1,SO:0001217,UniParc:UPI0000134285,UniRef:UniRef100_P0ADC1,UniRef:UniRef50_P0ADC1,UniRef:UniRef90_P0ADC1
contig_1	Pyrodigal	gene	643707	646289	.	-	.	ID=GCA000010485_00618_gene;locus_tag=GCA000010485_00618;gene=leuS
contig_1	Pyrodigal	CDS	643707	646289	.	-	0	ID=GCA000010485_00618;Name=leucine--tRNA ligase;locus_tag=GCA000010485_00618;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000010485_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_001157896.1,SO:0001217,UniParc:UPI000013655D,UniRef:UniRef100_Q8FJY9,UniRef:UniRef50_P07813,UniRef:UniRef90_P07813;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	646524	647006	.	+	.	ID=GCA000010485_00619_gene;locus_tag=GCA000010485_00619;gene=ybeL
contig_1	Pyrodigal	CDS	646524	647006	.	+	0	ID=GCA000010485_00619;Name=zinc ribbon-containing protein;locus_tag=GCA000010485_00619;product=zinc ribbon-containing protein;gene=ybeL;Parent=GCA000010485_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001044880.1,SO:0001217,UniParc:UPI000013A302,UniRef:UniRef100_P0AAT9,UniRef:UniRef50_P0AAT9,UniRef:UniRef90_P0AAT9
contig_1	Pyrodigal	gene	647256	647474	.	-	.	ID=GCA000010485_00620_gene;locus_tag=GCA000010485_00620
contig_1	Pyrodigal	CDS	647256	647474	.	-	0	ID=GCA000010485_00620;Name=Sel1 repeat family protein;locus_tag=GCA000010485_00620;product=Sel1 repeat family protein;Parent=GCA000010485_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001311495.1,SO:0001217,UniParc:UPI0001C229FE,UniRef:UniRef100_A0A061YGV6,UniRef:UniRef50_A0A061YGV6,UniRef:UniRef90_A0A061YGV6
contig_1	Pyrodigal	gene	647551	648105	.	-	.	ID=GCA000010485_00621_gene;locus_tag=GCA000010485_00621;gene=ybeT
contig_1	Pyrodigal	CDS	647551	648105	.	-	0	ID=GCA000010485_00621;Name=Sel1-repeat-containing protein YbeT;locus_tag=GCA000010485_00621;product=Sel1-repeat-containing protein YbeT;gene=ybeT;Parent=GCA000010485_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295868.1,SO:0001217,UniParc:UPI0001C229FF,UniRef:UniRef100_A0A061KPR3,UniRef:UniRef50_P77296,UniRef:UniRef90_P77296
contig_1	Pyrodigal	gene	648207	648914	.	+	.	ID=GCA000010485_00622_gene;locus_tag=GCA000010485_00622;gene=ybeU
contig_1	Pyrodigal	CDS	648207	648914	.	+	0	ID=GCA000010485_00622;Name=putative protein YbeU;locus_tag=GCA000010485_00622;product=putative protein YbeU;gene=ybeU;Parent=GCA000010485_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030943.1,SO:0001217,UniParc:UPI00016A0A57,UniRef:UniRef100_A0A066T6F6,UniRef:UniRef50_P77627,UniRef:UniRef90_P77427
contig_1	Pyrodigal	gene	648911	650362	.	+	.	ID=GCA000010485_00623_gene;locus_tag=GCA000010485_00623;gene=djlC
contig_1	Pyrodigal	CDS	648911	650362	.	+	0	ID=GCA000010485_00623;Name=co-chaperone DjlC;locus_tag=GCA000010485_00623;product=co-chaperone DjlC;Dbxref=GO:0001671,GO:0005886,GO:0046686;gene=djlC;Parent=GCA000010485_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300403,RefSeq:WP_001295869.1,SO:0001217,UniParc:UPI0001C22A00,UniRef:UniRef100_A0A061YAJ2,UniRef:UniRef50_P77359,UniRef:UniRef90_P77359
contig_1	Pyrodigal	gene	650422	652092	.	-	.	ID=GCA000010485_00624_gene;locus_tag=GCA000010485_00624;gene=hscC
contig_1	Pyrodigal	CDS	650422	652092	.	-	0	ID=GCA000010485_00624;Name=molecular chaperone HscC;locus_tag=GCA000010485_00624;product=molecular chaperone HscC;gene=hscC;Parent=GCA000010485_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000367875,BlastRules:WP_000974591,RefSeq:WP_000367903.1,SO:0001217,UniParc:UPI0001C22A01,UniRef:UniRef100_A0A061KSF6,UniRef:UniRef50_Q8ZQY6,UniRef:UniRef90_A0A069C8C5
contig_1	Pyrodigal	gene	652176	653111	.	-	.	ID=GCA000010485_00625_gene;locus_tag=GCA000010485_00625;gene=rihA
contig_1	Pyrodigal	CDS	652176	653111	.	-	0	ID=GCA000010485_00625;Name=pyrimidine-specific ribonucleoside hydrolase RihA;locus_tag=GCA000010485_00625;product=pyrimidine-specific ribonucleoside hydrolase RihA;Dbxref=GO:0005829,GO:0006152,GO:0006206,GO:0008477,GO:0015949,GO:0045437,GO:0050263;gene=rihA;Parent=GCA000010485_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,KEGG:K01250,RefSeq:WP_001207535.1,SO:0001217,UniParc:UPI0001C22A02,UniRef:UniRef100_A0A066T228,UniRef:UniRef50_P41409,UniRef:UniRef90_P41409;ec_number=3.2.2.3
contig_1	Pyrodigal	gene	653229	653954	.	-	.	ID=GCA000010485_00626_gene;locus_tag=GCA000010485_00626;gene=gltL
contig_1	Pyrodigal	CDS	653229	653954	.	-	0	ID=GCA000010485_00626;Name=glutamate/aspartate ABC transporter ATP-binding protein GltL;locus_tag=GCA000010485_00626;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;Dbxref=GO:0005524,GO:0016020,GO:0016887,GO:0055052,GO:0098712,GO:0102013,GO:0140009;gene=gltL;Parent=GCA000010485_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000631384,RefSeq:WP_000631387.1,SO:0001217,UniParc:UPI0001C22A03,UniRef:UniRef100_A0A066T694,UniRef:UniRef50_P48243,UniRef:UniRef90_P0AAG3;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	653954	654628	.	-	.	ID=GCA000010485_00627_gene;locus_tag=GCA000010485_00627;gene=gltK
contig_1	Pyrodigal	CDS	653954	654628	.	-	0	ID=GCA000010485_00627;Name=glutamate/aspartate ABC transporter permease GltK;locus_tag=GCA000010485_00627;product=glutamate/aspartate ABC transporter permease GltK;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0022857,GO:0055052,GO:0098712,GO:0140009;gene=gltK;Parent=GCA000010485_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,RefSeq:WP_000272824.1,SO:0001217,UniParc:UPI000012B80F,UniRef:UniRef100_P0AER5,UniRef:UniRef50_P0AER5,UniRef:UniRef90_P0AER5;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	654628	655368	.	-	.	ID=GCA000010485_00628_gene;locus_tag=GCA000010485_00628;gene=gltJ
contig_1	Pyrodigal	CDS	654628	655368	.	-	0	ID=GCA000010485_00628;Name=glutamate/aspartate ABC transporter permease GltJ;locus_tag=GCA000010485_00628;product=glutamate/aspartate ABC transporter permease GltJ;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0022857,GO:0055052,GO:0098712,GO:0140009;gene=gltJ;Parent=GCA000010485_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000020941,COG:COG0765,COG:E,RefSeq:WP_000020941.1,SO:0001217,UniParc:UPI000012B80E,UniRef:UniRef100_P0AER3,UniRef:UniRef50_P0AER3,UniRef:UniRef90_P0AER3;ec_number=7.4.2.1
contig_1	Infernal	gene	655380	655542	.	-	.	ID=GCA000010485_00629_gene;locus_tag=GCA000010485_00629;gene=sroC
contig_1	Infernal	ncRNA	655380	655542	9.7e-31	-	.	ID=GCA000010485_00629;Name=sroC RNA;locus_tag=GCA000010485_00629;gene=sroC;product=sroC RNA;Dbxref=RFAM:RF00369;Parent=GCA000010485_00629_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00369
contig_1	Pyrodigal	gene	655538	656446	.	-	.	ID=GCA000010485_00630_gene;locus_tag=GCA000010485_00630;gene=gltI
contig_1	Pyrodigal	CDS	655538	656446	.	-	0	ID=GCA000010485_00630;Name=glutamate/aspartate ABC transporter substrate-binding protein GltI;locus_tag=GCA000010485_00630;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;Dbxref=GO:0005576,GO:0006865,GO:0030288;gene=gltI;Parent=GCA000010485_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001177086,COG:COG0834,COG:ET,RefSeq:WP_001295870.1,SO:0001217,UniParc:UPI0001C22A04,UniRef:UniRef100_A0A061KSF0,UniRef:UniRef50_P37902,UniRef:UniRef90_P37902
contig_1	Pyrodigal	gene	656900	658777	.	+	.	ID=GCA000010485_00631_gene;locus_tag=GCA000010485_00631
contig_1	Pyrodigal	CDS	656900	658777	.	+	0	ID=GCA000010485_00631;Name=Peptidase S54 rhomboid domain-containing protein;locus_tag=GCA000010485_00631;product=Peptidase S54 rhomboid domain-containing protein;Parent=GCA000010485_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001276749.1,SO:0001217,UniParc:UPI0001C22A05,UniRef:UniRef100_A0A7I0KSN1,UniRef:UniRef50_A0A0H2V561,UniRef:UniRef90_A0A0H2V561
contig_1	Pyrodigal	gene	658904	660442	.	-	.	ID=GCA000010485_00632_gene;locus_tag=GCA000010485_00632;gene=lnt
contig_1	Pyrodigal	CDS	658904	660442	.	-	0	ID=GCA000010485_00632;Name=apolipoprotein N-acyltransferase;locus_tag=GCA000010485_00632;product=apolipoprotein N-acyltransferase;Dbxref=GO:0005886,GO:0016020,GO:0016410,GO:0042158;gene=lnt;Parent=GCA000010485_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0815,COG:M,KEGG:K03820,RefSeq:WP_000853037.1,SO:0001217,UniParc:UPI0001C22A06,UniRef:UniRef100_A0A7I0L237,UniRef:UniRef50_P23930,UniRef:UniRef90_P23930;ec_number=2.3.1.269
contig_1	Pyrodigal	gene	660467	661345	.	-	.	ID=GCA000010485_00633_gene;locus_tag=GCA000010485_00633;gene=corC
contig_1	Pyrodigal	CDS	660467	661345	.	-	0	ID=GCA000010485_00633;Name=CNNM family magnesium/cobalt transport protein CorC;locus_tag=GCA000010485_00633;product=CNNM family magnesium/cobalt transport protein CorC;Dbxref=GO:0005886,GO:0050660;gene=corC;Parent=GCA000010485_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4535,COG:P,RefSeq:WP_001278605.1,SO:0001217,UniParc:UPI0000127F1D,UniRef:UniRef100_P0AE78,UniRef:UniRef50_P0A2L3,UniRef:UniRef90_P0A2L3
contig_1	Pyrodigal	gene	661435	661902	.	-	.	ID=GCA000010485_00634_gene;locus_tag=GCA000010485_00634;gene=ybeY
contig_1	Pyrodigal	CDS	661435	661902	.	-	0	ID=GCA000010485_00634;Name=rRNA maturation RNase YbeY;locus_tag=GCA000010485_00634;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000010485_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_000084467.1,SO:0001217,UniParc:UPI00000DE87D,UniRef:UniRef100_B7UKU2,UniRef:UniRef50_P0A898,UniRef:UniRef90_P0A898;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	661899	662978	.	-	.	ID=GCA000010485_00635_gene;locus_tag=GCA000010485_00635;gene=ybeZ
contig_1	Pyrodigal	CDS	661899	662978	.	-	0	ID=GCA000010485_00635;Name=PhoH-like protein;locus_tag=GCA000010485_00635;product=PhoH-like protein;Dbxref=GO:0005524,GO:0005829;gene=ybeZ;Parent=GCA000010485_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1702,COG:T,KEGG:K06217,RefSeq:WP_000490838.1,SO:0001217,UniParc:UPI00001319C2,UniRef:UniRef100_A0A485JIG2,UniRef:UniRef50_P0A9K3,UniRef:UniRef90_P0A9K3
contig_1	Pyrodigal	gene	663092	664516	.	-	.	ID=GCA000010485_00636_gene;locus_tag=GCA000010485_00636;gene=miaB
contig_1	Pyrodigal	CDS	663092	664516	.	-	0	ID=GCA000010485_00636;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000010485_00636;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0035600,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000010485_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_000162747.1,SO:0001217,UniParc:UPI000187BACC,UniRef:UniRef100_A0A0J2AAA1,UniRef:UniRef50_P0AEI1,UniRef:UniRef90_P0AEI1;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	664662	665837	.	+	.	ID=GCA000010485_00637_gene;locus_tag=GCA000010485_00637;gene=ubiF
contig_1	Pyrodigal	CDS	664662	665837	.	+	0	ID=GCA000010485_00637;Name=3-demethoxyubiquinol 3-hydroxylase;locus_tag=GCA000010485_00637;product=3-demethoxyubiquinol 3-hydroxylase;Dbxref=GO:0005737,GO:0006744,GO:0008682,GO:0016705,GO:0016709,GO:0071949,GO:0110142;gene=ubiF;Parent=GCA000010485_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_000184611.1,SO:0001217,UniParc:UPI0001C22A07,UniRef:UniRef100_A0A066SYA9,UniRef:UniRef50_P75728,UniRef:UniRef90_P75728;ec_number=1.14.99.60
contig_1	tRNAscan-SE	gene	665992	666066	.	-	.	ID=GCA000010485_00638_gene;locus_tag=GCA000010485_00638;gene=trnQ
contig_1	tRNAscan-SE	tRNA	665992	666066	.	-	.	ID=GCA000010485_00638;Name=tRNA-Gln(ctg);locus_tag=GCA000010485_00638;product=tRNA-Gln(ctg);gene=trnQ;anti_codon=ctg;amino_acid=Gln;Parent=GCA000010485_00638_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	666104	666178	.	-	.	ID=GCA000010485_00639_gene;locus_tag=GCA000010485_00639;gene=trnQ
contig_1	tRNAscan-SE	tRNA	666104	666178	.	-	.	ID=GCA000010485_00639;Name=tRNA-Gln(ctg);locus_tag=GCA000010485_00639;product=tRNA-Gln(ctg);gene=trnQ;anti_codon=ctg;amino_acid=Gln;Parent=GCA000010485_00639_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	666227	666303	.	-	.	ID=GCA000010485_00640_gene;locus_tag=GCA000010485_00640;gene=trnM
contig_1	tRNAscan-SE	tRNA	666227	666303	.	-	.	ID=GCA000010485_00640;Name=tRNA-Met(cat);locus_tag=GCA000010485_00640;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000010485_00640_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	666319	666393	.	-	.	ID=GCA000010485_00641_gene;locus_tag=GCA000010485_00641;gene=trnQ
contig_1	tRNAscan-SE	tRNA	666319	666393	.	-	.	ID=GCA000010485_00641;Name=tRNA-Gln(ttg);locus_tag=GCA000010485_00641;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000010485_00641_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	666428	666502	.	-	.	ID=GCA000010485_00642_gene;locus_tag=GCA000010485_00642;gene=trnQ
contig_1	tRNAscan-SE	tRNA	666428	666502	.	-	.	ID=GCA000010485_00642;Name=tRNA-Gln(ttg);locus_tag=GCA000010485_00642;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000010485_00642_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	666526	666610	.	-	.	ID=GCA000010485_00643_gene;locus_tag=GCA000010485_00643;gene=trnL
contig_1	tRNAscan-SE	tRNA	666526	666610	.	-	.	ID=GCA000010485_00643;Name=tRNA-Leu(tag);locus_tag=GCA000010485_00643;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000010485_00643_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	666621	666697	.	-	.	ID=GCA000010485_00644_gene;locus_tag=GCA000010485_00644;gene=trnM
contig_1	tRNAscan-SE	tRNA	666621	666697	.	-	.	ID=GCA000010485_00644;Name=tRNA-Met(cat);locus_tag=GCA000010485_00644;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000010485_00644_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	667030	667467	.	+	.	ID=GCA000010485_00645_gene;locus_tag=GCA000010485_00645
contig_1	Pyrodigal	CDS	667030	667467	.	+	0	ID=GCA000010485_00645;Name=Lipoprotein;locus_tag=GCA000010485_00645;product=Lipoprotein;Parent=GCA000010485_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000943484.1,SO:0001217,UniParc:UPI0001C22A08,UniRef:UniRef100_A0A066SXZ6,UniRef:UniRef50_A0A0L0AMP8,UniRef:UniRef90_A0A066SXZ6
contig_1	Pyrodigal	gene	667509	669173	.	-	.	ID=GCA000010485_00646_gene;locus_tag=GCA000010485_00646;gene=asnB
contig_1	Pyrodigal	CDS	667509	669173	.	-	0	ID=GCA000010485_00646;Name=asparagine synthase B;locus_tag=GCA000010485_00646;product=asparagine synthase B;Dbxref=GO:0004066,GO:0004071,GO:0005524,GO:0005737,GO:0005829,GO:0006529,GO:0006541,GO:0008652,GO:0009063,GO:0016597,GO:0042802,GO:0042803,GO:0070981;gene=asnB;Parent=GCA000010485_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0367,COG:E,KEGG:K01953,RefSeq:WP_000337077.1,SO:0001217,UniParc:UPI0000168043,UniRef:UniRef100_P22106,UniRef:UniRef50_P22106,UniRef:UniRef90_P22106;ec_number=6.3.5.4
contig_1	Pyrodigal	gene	669429	670181	.	-	.	ID=GCA000010485_00647_gene;locus_tag=GCA000010485_00647;gene=nagD
contig_1	Pyrodigal	CDS	669429	670181	.	-	0	ID=GCA000010485_00647;Name=ribonucleotide monophosphatase NagD;locus_tag=GCA000010485_00647;product=ribonucleotide monophosphatase NagD;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0008253,GO:0016791,GO:0046050,GO:0106411;gene=nagD;Parent=GCA000010485_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000153129,COG:COG0647,COG:F,RefSeq:WP_000153129.1,SO:0001217,UniParc:UPI000012FD08,UniRef:UniRef100_P0AF24,UniRef:UniRef50_P0AF24,UniRef:UniRef90_P0AF24;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	670229	671449	.	-	.	ID=GCA000010485_00648_gene;locus_tag=GCA000010485_00648;gene=nagC
contig_1	Pyrodigal	CDS	670229	671449	.	-	0	ID=GCA000010485_00648;Name=DNA-binding transcriptional regulator NagC;locus_tag=GCA000010485_00648;product=DNA-binding transcriptional regulator NagC;Dbxref=GO:0003677,GO:0003700;gene=nagC;Parent=GCA000010485_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000187594,COG:COG1940,COG:GK,KEGG:K15545,RefSeq:WP_000187594.1,SO:0001217,UniParc:UPI000012FD07,UniRef:UniRef100_P0AF20,UniRef:UniRef50_P0AF20,UniRef:UniRef90_P0AF20
contig_1	Pyrodigal	gene	671458	672606	.	-	.	ID=GCA000010485_00649_gene;locus_tag=GCA000010485_00649;gene=nagA
contig_1	Pyrodigal	CDS	671458	672606	.	-	0	ID=GCA000010485_00649;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000010485_00649;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA000010485_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000271154.1,SO:0001217,UniParc:UPI00000DE882,UniRef:UniRef100_A0A376LJZ0,UniRef:UniRef50_P0AF18,UniRef:UniRef90_A0A0D7LPS2;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	672666	673466	.	-	.	ID=GCA000010485_00650_gene;locus_tag=GCA000010485_00650;gene=nagB
contig_1	Pyrodigal	CDS	672666	673466	.	-	0	ID=GCA000010485_00650;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000010485_00650;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0005829,GO:0005975,GO:0006043,GO:0006044,GO:0006046,GO:0019262,GO:0042802;gene=nagB;Parent=GCA000010485_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_001237072.1,SO:0001217,UniParc:UPI000003061A,UniRef:UniRef100_P0A759,UniRef:UniRef50_P0A759,UniRef:UniRef90_P0A759;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	673799	675745	.	+	.	ID=GCA000010485_00651_gene;locus_tag=GCA000010485_00651;gene=nagE
contig_1	Pyrodigal	CDS	673799	675745	.	+	0	ID=GCA000010485_00651;Name=PTS N-acetyl glucosamine transporter subunit IIABC;locus_tag=GCA000010485_00651;product=PTS N-acetyl glucosamine transporter subunit IIABC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0015572,GO:0015764,GO:0016020,GO:0016301,GO:0019866,GO:0046872,GO:0090563,GO:0103111;gene=nagE;Parent=GCA000010485_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_001023114.1,SO:0001217,UniParc:UPI0001C22A3D,UniRef:UniRef100_A0A066T6B3,UniRef:UniRef50_P09323,UniRef:UniRef90_P09323;ec_number=2.7.1.193
contig_1	Pyrodigal	gene	675834	677114	.	-	.	ID=GCA000010485_00652_gene;locus_tag=GCA000010485_00652
contig_1	Pyrodigal	CDS	675834	677114	.	-	0	ID=GCA000010485_00652;Name=Citrate transporter-like domain-containing protein;locus_tag=GCA000010485_00652;product=Citrate transporter-like domain-containing protein;Parent=GCA000010485_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000177661.1,SO:0001217,UniParc:UPI0001C22A3E,UniRef:UniRef100_A0A061YIK9,UniRef:UniRef50_S1QBC8,UniRef:UniRef90_S1QBC8
contig_1	Pyrodigal	gene	677128	677598	.	-	.	ID=GCA000010485_00653_gene;locus_tag=GCA000010485_00653
contig_1	Pyrodigal	CDS	677128	677598	.	-	0	ID=GCA000010485_00653;Name=Cytoplasmic protein;locus_tag=GCA000010485_00653;product=Cytoplasmic protein;Parent=GCA000010485_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19334,RefSeq:WP_000583481.1,SO:0001217,UniParc:UPI0001C22A3F,UniRef:UniRef100_A0A066SYB6,UniRef:UniRef50_A0A0H3FWC3,UniRef:UniRef90_F4SW01
contig_1	Pyrodigal	gene	677595	678764	.	-	.	ID=GCA000010485_00654_gene;locus_tag=GCA000010485_00654
contig_1	Pyrodigal	CDS	677595	678764	.	-	0	ID=GCA000010485_00654;Name=Sialidase domain-containing protein;locus_tag=GCA000010485_00654;product=Sialidase domain-containing protein;Parent=GCA000010485_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4692,COG:GM,RefSeq:WP_000109425.1,SO:0001217,UniParc:UPI0001C22A40,UniRef:UniRef100_A0A061KPP4,UniRef:UniRef50_C1BBA3,UniRef:UniRef90_Q1REP3
contig_1	Pyrodigal	gene	678800	679558	.	-	.	ID=GCA000010485_00655_gene;locus_tag=GCA000010485_00655;gene=terC
contig_1	Pyrodigal	CDS	678800	679558	.	-	0	ID=GCA000010485_00655;Name=Integral membrane transport protein;locus_tag=GCA000010485_00655;product=Integral membrane transport protein;gene=terC;Parent=GCA000010485_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_000480543.1,SO:0001217,UniParc:UPI0001C22A41,UniRef:UniRef100_A0A066T253,UniRef:UniRef50_P43932,UniRef:UniRef90_A0A0G9FT95
contig_1	Pyrodigal	gene	679618	680505	.	-	.	ID=GCA000010485_00656_gene;locus_tag=GCA000010485_00656;gene=dapA
contig_1	Pyrodigal	CDS	679618	680505	.	-	0	ID=GCA000010485_00656;Name=Dihydrodipicolinate synthase;locus_tag=GCA000010485_00656;product=Dihydrodipicolinate synthase;gene=dapA;Parent=GCA000010485_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_001126959.1,SO:0001217,UniParc:UPI0001C22A42,UniRef:UniRef100_A0A066T6C0,UniRef:UniRef50_D2TIF2,UniRef:UniRef90_A0A0D6I922
contig_1	Pyrodigal	gene	680509	681666	.	-	.	ID=GCA000010485_00657_gene;locus_tag=GCA000010485_00657;gene=eutG
contig_1	Pyrodigal	CDS	680509	681666	.	-	0	ID=GCA000010485_00657;Name=Iron-containing alcohol dehydrogenase;locus_tag=GCA000010485_00657;product=Iron-containing alcohol dehydrogenase;gene=eutG;Parent=GCA000010485_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,RefSeq:WP_000234742.1,SO:0001217,UniParc:UPI0001C22A43,UniRef:UniRef100_A0A066T6I2,UniRef:UniRef50_A0A181U4S5,UniRef:UniRef90_A0A0D6I8R7
contig_1	Pyrodigal	gene	681836	683071	.	+	.	ID=GCA000010485_00658_gene;locus_tag=GCA000010485_00658;gene=dtnK
contig_1	Pyrodigal	CDS	681836	683071	.	+	0	ID=GCA000010485_00658;Name=D-threonate kinase;locus_tag=GCA000010485_00658;product=D-threonate kinase;Dbxref=GO:0005524,GO:0016301;gene=dtnK;Parent=GCA000010485_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22129,RefSeq:WP_000410734.1,SO:0001217,UniParc:UPI00021857AA,UniRef:UniRef100_A0A066SYB9,UniRef:UniRef50_A0A0H3CI57,UniRef:UniRef90_B7MFU4;ec_number=2.7.1.220
contig_1	Pyrodigal	gene	683064	684050	.	+	.	ID=GCA000010485_00659_gene;locus_tag=GCA000010485_00659;gene=pdxA
contig_1	Pyrodigal	CDS	683064	684050	.	+	0	ID=GCA000010485_00659;Name=D-threonate 4-phosphate dehydrogenase;locus_tag=GCA000010485_00659;product=D-threonate 4-phosphate dehydrogenase;gene=pdxA;Parent=GCA000010485_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1995,COG:H,RefSeq:WP_001059579.1,SO:0001217,UniParc:UPI0001C22A45,UniRef:UniRef100_A0A066SY14,UniRef:UniRef50_P58718,UniRef:UniRef90_A0A0D8W0I5
contig_1	Pyrodigal	gene	684052	684813	.	+	.	ID=GCA000010485_00660_gene;locus_tag=GCA000010485_00660;gene=glpR
contig_1	Pyrodigal	CDS	684052	684813	.	+	0	ID=GCA000010485_00660;Name=DeoR family transcriptional regulator;locus_tag=GCA000010485_00660;product=DeoR family transcriptional regulator;gene=glpR;Parent=GCA000010485_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_000679501.1,SO:0001217,UniParc:UPI0000043939,UniRef:UniRef100_E2QI66,UniRef:UniRef50_A0A0H3CK74,UniRef:UniRef90_E2QI66
contig_1	Pyrodigal	gene	685033	686697	.	+	.	ID=GCA000010485_00661_gene;locus_tag=GCA000010485_00661;gene=glnS
contig_1	Pyrodigal	CDS	685033	686697	.	+	0	ID=GCA000010485_00661;Name=glutamine--tRNA ligase;locus_tag=GCA000010485_00661;product=glutamine--tRNA ligase;Dbxref=GO:0000166,GO:0004819,GO:0005524,GO:0005737,GO:0005829,GO:0006424,GO:0006425;gene=glnS;Parent=GCA000010485_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001287134.1,SO:0001217,UniParc:UPI00000DE88C,UniRef:UniRef100_B7UKW1,UniRef:UniRef50_Q8X9H8,UniRef:UniRef90_Q8X9H8;ec_number=6.1.1.18
contig_1	Pyrodigal	gene	687139	688545	.	+	.	ID=GCA000010485_00662_gene;locus_tag=GCA000010485_00662;gene=chiP
contig_1	Pyrodigal	CDS	687139	688545	.	+	0	ID=GCA000010485_00662;Name=chitoporin;locus_tag=GCA000010485_00662;product=chitoporin;Dbxref=GO:0006811,GO:0009279,GO:0015267,GO:0015288,GO:0015772,GO:0015774,GO:0046930,GO:0052778;gene=chiP;Parent=GCA000010485_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001258803,RefSeq:WP_001201175.1,SO:0001217,UniParc:UPI0001C22A46,UniRef:UniRef100_A0A061Y5G2,UniRef:UniRef50_P75733,UniRef:UniRef90_P75733
contig_1	Pyrodigal	gene	688595	688921	.	+	.	ID=GCA000010485_00663_gene;locus_tag=GCA000010485_00663;gene=chiQ
contig_1	Pyrodigal	CDS	688595	688921	.	+	0	ID=GCA000010485_00663;Name=putative lipoprotein ChiQ;locus_tag=GCA000010485_00663;product=putative lipoprotein ChiQ;Dbxref=GO:0005886;gene=chiQ;Parent=GCA000010485_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733594.1,SO:0001217,UniParc:UPI00000E49B4,UniRef:UniRef100_E2QI69,UniRef:UniRef50_P75734,UniRef:UniRef90_P75734
contig_1	Pyrodigal	gene	689005	689451	.	-	.	ID=GCA000010485_00664_gene;locus_tag=GCA000010485_00664;gene=fur
contig_1	Pyrodigal	CDS	689005	689451	.	-	0	ID=GCA000010485_00664;Name=ferric iron uptake transcriptional regulator;locus_tag=GCA000010485_00664;product=ferric iron uptake transcriptional regulator;Dbxref=GO:0000976,GO:0001216,GO:0001217,GO:0003700,GO:0005829,GO:0006355,GO:0008270,GO:0032993,GO:0043565,GO:0045892,GO:0045893,GO:1900705;gene=fur;Parent=GCA000010485_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_000131702.1,SO:0001217,UniParc:UPI000012AD7B,UniRef:UniRef100_P0A9A9,UniRef:UniRef50_P0A9A9,UniRef:UniRef90_P0A9A9,VFDB:VFC0301,VFDB:VFG000478
contig_1	Bakta	gene	689444	689530	.	-	.	ID=GCA000010485_00665_gene;locus_tag=GCA000010485_00665;inference=ab initio prediction:Bakta;gene=uof
contig_1	Bakta	CDS	689444	689530	.	-	0	ID=GCA000010485_00665;Name=fur leader peptide;locus_tag=GCA000010485_00665;product=fur leader peptide;Dbxref=GO:0006417;gene=uof;Parent=GCA000010485_00665_gene;Note=RefSeq:WP_001406816.1,SO:0001217,UniParc:UPI00015D57D0,UniRef:UniRef100_A8DYP9,UniRef:UniRef50_A8DYP9,UniRef:UniRef90_A8DYP9
contig_1	Pyrodigal	gene	689740	690270	.	-	.	ID=GCA000010485_00666_gene;locus_tag=GCA000010485_00666;gene=fldA
contig_1	Pyrodigal	CDS	689740	690270	.	-	0	ID=GCA000010485_00666;Name=flavodoxin FldA;locus_tag=GCA000010485_00666;product=flavodoxin FldA;Dbxref=GO:0005737,GO:0005829,GO:0009055,GO:0010181;gene=fldA;Parent=GCA000010485_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_001018618.1,SO:0001217,UniParc:UPI0000154D76,UniRef:UniRef100_P61949,UniRef:UniRef50_P61949,UniRef:UniRef90_P61949
contig_1	Pyrodigal	gene	690410	690772	.	-	.	ID=GCA000010485_00667_gene;locus_tag=GCA000010485_00667;gene=ybfE
contig_1	Pyrodigal	CDS	690410	690772	.	-	0	ID=GCA000010485_00667;Name=LexA regulated protein;locus_tag=GCA000010485_00667;product=LexA regulated protein;gene=ybfE;Parent=GCA000010485_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291238.1,SO:0001217,UniParc:UPI000013A31A,UniRef:UniRef100_C3TIZ7,UniRef:UniRef50_P0AAU7,UniRef:UniRef90_A0A8S0FYX0
contig_1	Pyrodigal	gene	690843	691607	.	-	.	ID=GCA000010485_00668_gene;locus_tag=GCA000010485_00668;gene=ybfF
contig_1	Pyrodigal	CDS	690843	691607	.	-	0	ID=GCA000010485_00668;Name=esterase;locus_tag=GCA000010485_00668;product=esterase;Dbxref=GO:0005829,GO:0016790,GO:0106435;gene=ybfF;Parent=GCA000010485_00668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000773282.1,SO:0001217,UniParc:UPI00000DE890,UniRef:UniRef100_E2QI73,UniRef:UniRef50_P75736,UniRef:UniRef90_P75736;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	691792	692337	.	+	.	ID=GCA000010485_00669_gene;locus_tag=GCA000010485_00669;gene=seqA
contig_1	Pyrodigal	CDS	691792	692337	.	+	0	ID=GCA000010485_00669;Name=replication initiation negative regulator SeqA;locus_tag=GCA000010485_00669;product=replication initiation negative regulator SeqA;Dbxref=GO:0003677,GO:0005737,GO:0006355,GO:0032297,GO:0043565;gene=seqA;Parent=GCA000010485_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3057,COG:L,KEGG:K03645,RefSeq:WP_001295872.1,SO:0001217,UniParc:UPI0000E44EDB,UniRef:UniRef100_A0A061KQD6,UniRef:UniRef50_P0AFY8,UniRef:UniRef90_P0AFY8
contig_1	Pyrodigal	gene	692363	694003	.	+	.	ID=GCA000010485_00670_gene;locus_tag=GCA000010485_00670;gene=pgm
contig_1	Pyrodigal	CDS	692363	694003	.	+	0	ID=GCA000010485_00670;Name=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);locus_tag=GCA000010485_00670;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);Dbxref=GO:0000287,GO:0004614,GO:0005829,GO:0005975,GO:0006006;gene=pgm;Parent=GCA000010485_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0033,COG:G,RefSeq:WP_001545846.1,SO:0001217,UniParc:UPI0001C22A47,UniRef:UniRef100_A0A7I0KSK4,UniRef:UniRef50_P36938,UniRef:UniRef90_P36938;ec_number=5.4.2.2
contig_1	Pyrodigal	gene	694060	695379	.	-	.	ID=GCA000010485_00671_gene;locus_tag=GCA000010485_00671;gene=potE
contig_1	Pyrodigal	CDS	694060	695379	.	-	0	ID=GCA000010485_00671;Name=putrescine-ornithine antiporter;locus_tag=GCA000010485_00671;product=putrescine-ornithine antiporter;Dbxref=GO:0005886,GO:0015293,GO:0015496,GO:0015822,GO:0015847,GO:0016020,GO:0055085;gene=potE;Parent=GCA000010485_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000075845.1,SO:0001217,UniParc:UPI0000131F9B,UniRef:UniRef100_P0AAF1,UniRef:UniRef50_P0AAF1,UniRef:UniRef90_P0AAF1
contig_1	Pyrodigal	gene	695376	697574	.	-	.	ID=GCA000010485_00672_gene;locus_tag=GCA000010485_00672;gene=speF
contig_1	Pyrodigal	CDS	695376	697574	.	-	0	ID=GCA000010485_00672;Name=ornithine decarboxylase SpeF;locus_tag=GCA000010485_00672;product=ornithine decarboxylase SpeF;Dbxref=GO:0004586,GO:0005829,GO:0006520,GO:0008295,GO:0030170,GO:0033387,GO:0042803,GO:0071468;gene=speF;Parent=GCA000010485_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531487.1,SO:0001217,UniParc:UPI000188716A,UniRef:UniRef100_A0A061KUX5,UniRef:UniRef50_P24169,UniRef:UniRef90_P24169;ec_number=4.1.1.17
contig_1	Pyrodigal	gene	698263	698940	.	-	.	ID=GCA000010485_00673_gene;locus_tag=GCA000010485_00673;gene=kdpE
contig_1	Pyrodigal	CDS	698263	698940	.	-	0	ID=GCA000010485_00673;Name=two-component system response regulator KdpE;locus_tag=GCA000010485_00673;product=two-component system response regulator KdpE;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0000987,GO:0001216,GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0032993,GO:0042803;gene=kdpE;Parent=GCA000010485_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07667,RefSeq:WP_000186068.1,SO:0001217,UniParc:UPI0001C22A48,UniRef:UniRef100_A0A061KSC3,UniRef:UniRef50_P21866,UniRef:UniRef90_P21866
contig_1	Pyrodigal	gene	698937	701621	.	-	.	ID=GCA000010485_00674_gene;locus_tag=GCA000010485_00674;gene=kdpD
contig_1	Pyrodigal	CDS	698937	701621	.	-	0	ID=GCA000010485_00674;Name=two-component system sensor histidine kinase KdpD;locus_tag=GCA000010485_00674;product=two-component system sensor histidine kinase KdpD;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005829,GO:0005886,GO:0007165,GO:0016772,GO:0030288,GO:0035865,GO:0042803;gene=kdpD;Parent=GCA000010485_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295875.1,SO:0001217,UniParc:UPI0001C22A49,UniRef:UniRef100_A0A066T274,UniRef:UniRef50_P21865,UniRef:UniRef90_P21865;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	701614	702186	.	-	.	ID=GCA000010485_00675_gene;locus_tag=GCA000010485_00675;gene=kdpC
contig_1	Pyrodigal	CDS	701614	702186	.	-	0	ID=GCA000010485_00675;Name=K(+)-transporting ATPase subunit C;locus_tag=GCA000010485_00675;product=K(+)-transporting ATPase subunit C;Dbxref=GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0031004;gene=kdpC;Parent=GCA000010485_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2156,COG:P,RefSeq:WP_001295876.1,SO:0001217,UniParc:UPI0001C22A4A,UniRef:UniRef100_A0A061YFH0,UniRef:UniRef50_Q8FJV5,UniRef:UniRef90_Q8FJV5;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	702195	704243	.	-	.	ID=GCA000010485_00676_gene;locus_tag=GCA000010485_00676;gene=kdpB
contig_1	Pyrodigal	CDS	702195	704243	.	-	0	ID=GCA000010485_00676;Name=potassium-transporting ATPase subunit KdpB;locus_tag=GCA000010485_00676;product=potassium-transporting ATPase subunit KdpB;Dbxref=GO:0000287,GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0016020,GO:0016887,GO:0031004;gene=kdpB;Parent=GCA000010485_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2216,COG:P,RefSeq:WP_000088001.1,SO:0001217,UniParc:UPI0001C22A4B,UniRef:UniRef100_A0A066T6K2,UniRef:UniRef50_P03960,UniRef:UniRef90_P03960;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	704266	705939	.	-	.	ID=GCA000010485_00677_gene;locus_tag=GCA000010485_00677;gene=kdpA
contig_1	Pyrodigal	CDS	704266	705939	.	-	0	ID=GCA000010485_00677;Name=potassium-transporting ATPase subunit KdpA;locus_tag=GCA000010485_00677;product=potassium-transporting ATPase subunit KdpA;Dbxref=GO:0005886,GO:0006813,GO:0008556,GO:0030955,GO:0031004;gene=kdpA;Parent=GCA000010485_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01546,RefSeq:WP_000741157.1,SO:0001217,UniParc:UPI0001C22A4C,UniRef:UniRef100_A0A066SYD9,UniRef:UniRef50_P03959,UniRef:UniRef90_P03959;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	706341	706547	.	+	.	ID=GCA000010485_00678_gene;locus_tag=GCA000010485_00678;gene=ybfA
contig_1	Pyrodigal	CDS	706341	706547	.	+	0	ID=GCA000010485_00678;Name=putative protein YbfA;locus_tag=GCA000010485_00678;product=putative protein YbfA;Dbxref=GO:0009314;gene=ybfA;Parent=GCA000010485_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000424788.1,SO:0001217,UniParc:UPI00000E49B5,UniRef:UniRef100_E2QI83,UniRef:UniRef50_P0AAU2,UniRef:UniRef90_P0AAU2
contig_1	Pyrodigal	gene	706648	707157	.	+	.	ID=GCA000010485_00679_gene;locus_tag=GCA000010485_00679;gene=ybgA
contig_1	Pyrodigal	CDS	706648	707157	.	+	0	ID=GCA000010485_00679;Name=putative protein YbgA;locus_tag=GCA000010485_00679;product=putative protein YbgA;gene=ybgA;Parent=GCA000010485_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3272,COG:S,RefSeq:WP_001075784.1,SO:0001217,UniParc:UPI0001C22A4D,UniRef:UniRef100_A0A061YFH8,UniRef:UniRef50_P24252,UniRef:UniRef90_P24252
contig_1	Pyrodigal	gene	707154	708572	.	+	.	ID=GCA000010485_00680_gene;locus_tag=GCA000010485_00680;gene=phrB
contig_1	Pyrodigal	CDS	707154	708572	.	+	0	ID=GCA000010485_00680;Name=deoxyribodipyrimidine photo-lyase;locus_tag=GCA000010485_00680;product=deoxyribodipyrimidine photo-lyase;Dbxref=GO:0000719,GO:0003677,GO:0003684,GO:0003904,GO:0007603,GO:0009416,GO:0071949;gene=phrB;Parent=GCA000010485_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0415,COG:L,RefSeq:WP_000207133.1,SO:0001217,UniParc:UPI0001C22A4E,UniRef:UniRef100_A0A061KUB7,UniRef:UniRef50_P00914,UniRef:UniRef90_P00914;ec_number=4.1.99.3
contig_1	Pyrodigal	gene	708614	710095	.	-	.	ID=GCA000010485_00681_gene;locus_tag=GCA000010485_00681;gene=dtpD
contig_1	Pyrodigal	CDS	708614	710095	.	-	0	ID=GCA000010485_00681;Name=dipeptide permease DtpD;locus_tag=GCA000010485_00681;product=dipeptide permease DtpD;Dbxref=GO:0005886,GO:0015031,GO:0015333,GO:0071916;gene=dtpD;Parent=GCA000010485_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001032689,RefSeq:WP_001032722.1,SO:0001217,UniParc:UPI00000DE89B,UniRef:UniRef100_E2QI86,UniRef:UniRef50_P75742,UniRef:UniRef90_P75742
contig_1	Pyrodigal	gene	710366	711109	.	+	.	ID=GCA000010485_00682_gene;locus_tag=GCA000010485_00682;gene=ybgI
contig_1	Pyrodigal	CDS	710366	711109	.	+	0	ID=GCA000010485_00682;Name=radiation resistance protein YbgI;locus_tag=GCA000010485_00682;product=radiation resistance protein YbgI;Dbxref=GO:0005737,GO:0005829,GO:0006281,GO:0010212,GO:0034214,GO:0042802,GO:0046872,GO:0060187;gene=ybgI;Parent=GCA000010485_00682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000798871,COG:COG0327,COG:H,RefSeq:WP_000798857.1,SO:0001217,UniParc:UPI000188808D,UniRef:UniRef100_A0A061KSB7,UniRef:UniRef50_P0AFP6,UniRef:UniRef90_P0AFP6;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	711132	711788	.	+	.	ID=GCA000010485_00683_gene;locus_tag=GCA000010485_00683;gene=pxpB
contig_1	Pyrodigal	CDS	711132	711788	.	+	0	ID=GCA000010485_00683;Name=5-oxoprolinase subunit PxpB;locus_tag=GCA000010485_00683;product=5-oxoprolinase subunit PxpB;Dbxref=GO:0005524,GO:0005975,GO:0008152,GO:0017168;gene=pxpB;Parent=GCA000010485_00683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_001188329.1,SO:0001217,UniParc:UPI000187B879,UniRef:UniRef100_A0A066T283,UniRef:UniRef50_P0AAV4,UniRef:UniRef90_P0AAV4;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	711782	712714	.	+	.	ID=GCA000010485_00684_gene;locus_tag=GCA000010485_00684;gene=pxpC
contig_1	Pyrodigal	CDS	711782	712714	.	+	0	ID=GCA000010485_00684;Name=5-oxoprolinase subunit PxpC;locus_tag=GCA000010485_00684;product=5-oxoprolinase subunit PxpC;Dbxref=GO:0005524,GO:0005829,GO:0005975,GO:0008152,GO:0017168;gene=pxpC;Parent=GCA000010485_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000912724,COG:COG1984,COG:E,RefSeq:WP_000912730.1,SO:0001217,UniParc:UPI0001C22A4F,UniRef:UniRef100_A0A066T6F2,UniRef:UniRef50_P75745,UniRef:UniRef90_P75745;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	712704	713438	.	+	.	ID=GCA000010485_00685_gene;locus_tag=GCA000010485_00685;gene=pxpA
contig_1	Pyrodigal	CDS	712704	713438	.	+	0	ID=GCA000010485_00685;Name=5-oxoprolinase subunit PxpA;locus_tag=GCA000010485_00685;product=5-oxoprolinase subunit PxpA;Dbxref=GO:0003824,GO:0005524,GO:0005975,GO:0017168;gene=pxpA;Parent=GCA000010485_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1540,COG:E,KEGG:K07160,RefSeq:WP_000687120.1,SO:0001217,UniParc:UPI0001C22A92,UniRef:UniRef100_A0A066T6L4,UniRef:UniRef50_P75746,UniRef:UniRef90_P75746;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	713474	714265	.	+	.	ID=GCA000010485_00686_gene;locus_tag=GCA000010485_00686;gene=nei
contig_1	Pyrodigal	CDS	713474	714265	.	+	0	ID=GCA000010485_00686;Name=endonuclease VIII;locus_tag=GCA000010485_00686;product=endonuclease VIII;Dbxref=GO:0000703,GO:0003677,GO:0003684,GO:0006281,GO:0006284,GO:0008270,GO:0140078;gene=nei;Parent=GCA000010485_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K05522,RefSeq:WP_001114009.1,SO:0001217,UniParc:UPI0001C22A93,UniRef:UniRef100_A0A061KUW4,UniRef:UniRef50_P50465,UniRef:UniRef90_P50465;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	714262	715308	.	-	.	ID=GCA000010485_00687_gene;locus_tag=GCA000010485_00687;gene=abrB
contig_1	Pyrodigal	CDS	714262	715308	.	-	0	ID=GCA000010485_00687;Name=Putative regulator AbrB;locus_tag=GCA000010485_00687;product=Putative regulator AbrB;Dbxref=GO:0005886,GO:0010468;gene=abrB;Parent=GCA000010485_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3180,COG:R,KEGG:K07120,RefSeq:WP_001144718.1,SO:0001217,UniParc:UPI0001C22A94,UniRef:UniRef100_A0A7I0KSJ0,UniRef:UniRef50_P75747,UniRef:UniRef90_P75747
contig_1	Pyrodigal	gene	715488	716201	.	-	.	ID=GCA000010485_00688_gene;locus_tag=GCA000010485_00688;gene=gntR
contig_1	Pyrodigal	CDS	715488	716201	.	-	0	ID=GCA000010485_00688;Name=Putative GntR family regulator;locus_tag=GCA000010485_00688;product=Putative GntR family regulator;gene=gntR;Parent=GCA000010485_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000004202.1,SO:0001217,UniParc:UPI0001C22A95,UniRef:UniRef100_A0A066T289,UniRef:UniRef50_A0A4R1NC44,UniRef:UniRef90_A0A376PYV6
contig_1	Pyrodigal	gene	716465	717151	.	+	.	ID=GCA000010485_00689_gene;locus_tag=GCA000010485_00689
contig_1	Pyrodigal	CDS	716465	717151	.	+	0	ID=GCA000010485_00689;Name=Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase;locus_tag=GCA000010485_00689;product=Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase;Parent=GCA000010485_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000265973.1,SO:0001217,UniParc:UPI0001C22A96,UniRef:UniRef100_A0A066T6F7,UniRef:UniRef50_A0A2N3KUK7,UniRef:UniRef90_A0A066T6F7
contig_1	Pyrodigal	gene	717164	718177	.	+	.	ID=GCA000010485_00690_gene;locus_tag=GCA000010485_00690
contig_1	Pyrodigal	CDS	717164	718177	.	+	0	ID=GCA000010485_00690;Name=Alcohol dehydrogenase catalytic domain-containing protein;locus_tag=GCA000010485_00690;product=Alcohol dehydrogenase catalytic domain-containing protein;Parent=GCA000010485_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000646085.1,SO:0001217,UniParc:UPI0001C22A97,UniRef:UniRef100_A0A135X7G8,UniRef:UniRef50_A0A210G136,UniRef:UniRef90_A0A210G136
contig_1	Pyrodigal	gene	718189	718944	.	+	.	ID=GCA000010485_00691_gene;locus_tag=GCA000010485_00691
contig_1	Pyrodigal	CDS	718189	718944	.	+	0	ID=GCA000010485_00691;Name=Putative Short-chain dehydrogenase/reductase SDR;locus_tag=GCA000010485_00691;product=Putative Short-chain dehydrogenase/reductase SDR;Parent=GCA000010485_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000991076.1,SO:0001217,UniParc:UPI0001C22A98,UniRef:UniRef100_A0A066SYF4,UniRef:UniRef50_A0A5C5Z2I9,UniRef:UniRef90_A0A376PXY9
contig_1	Pyrodigal	gene	718959	719270	.	+	.	ID=GCA000010485_00692_gene;locus_tag=GCA000010485_00692
contig_1	Pyrodigal	CDS	718959	719270	.	+	0	ID=GCA000010485_00692;Name=SAF domain-containing protein;locus_tag=GCA000010485_00692;product=SAF domain-containing protein;Parent=GCA000010485_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295877.1,SO:0001217,UniParc:UPI00021857DD,UniRef:UniRef100_A0A8S0FYI9,UniRef:UniRef50_A0A8S0FYI9,UniRef:UniRef90_A0A8S0FYI9
contig_1	Pyrodigal	gene	719270	720466	.	+	.	ID=GCA000010485_00693_gene;locus_tag=GCA000010485_00693
contig_1	Pyrodigal	CDS	719270	720466	.	+	0	ID=GCA000010485_00693;Name=Putative Altronate dehydratase;locus_tag=GCA000010485_00693;product=Putative Altronate dehydratase;Parent=GCA000010485_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000399432.1,SO:0001217,UniParc:UPI0001C22A9A,UniRef:UniRef100_A0A066T294,UniRef:UniRef50_A0A1M0D4P5,UniRef:UniRef90_A0A1M0D4P5
contig_1	Pyrodigal	gene	720494	721462	.	+	.	ID=GCA000010485_00694_gene;locus_tag=GCA000010485_00694
contig_1	Pyrodigal	CDS	720494	721462	.	+	0	ID=GCA000010485_00694;Name=C4-dicarboxylate ABC transporter;locus_tag=GCA000010485_00694;product=C4-dicarboxylate ABC transporter;Parent=GCA000010485_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735581.1,SO:0001217,UniParc:UPI0001C22A9B,UniRef:UniRef100_A0A061YFJ3,UniRef:UniRef50_A0A832PJS1,UniRef:UniRef90_A0A1M2J2P7
contig_1	Pyrodigal	gene	721522	721983	.	+	.	ID=GCA000010485_00695_gene;locus_tag=GCA000010485_00695
contig_1	Pyrodigal	CDS	721522	721983	.	+	0	ID=GCA000010485_00695;Name=TRAP transporter small permease protein;locus_tag=GCA000010485_00695;product=TRAP transporter small permease protein;Parent=GCA000010485_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001237779.1,SO:0001217,UniParc:UPI0001C22A9C,UniRef:UniRef100_A0A066T6M4,UniRef:UniRef50_A0A212KJA7,UniRef:UniRef90_A0A376PZZ6
contig_1	Pyrodigal	gene	721983	723293	.	+	.	ID=GCA000010485_00696_gene;locus_tag=GCA000010485_00696
contig_1	Pyrodigal	CDS	721983	723293	.	+	0	ID=GCA000010485_00696;Name=TRAP transporter large permease protein;locus_tag=GCA000010485_00696;product=TRAP transporter large permease protein;Parent=GCA000010485_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000126143.1,SO:0001217,UniParc:UPI0001C22A9D,UniRef:UniRef100_A0A135X7F9,UniRef:UniRef50_A0A2B7LUG8,UniRef:UniRef90_A0A154CUH9
contig_1	Pyrodigal	gene	723340	724623	.	-	.	ID=GCA000010485_00697_gene;locus_tag=GCA000010485_00697;gene=gltA
contig_1	Pyrodigal	CDS	723340	724623	.	-	0	ID=GCA000010485_00697;Name=citrate synthase;locus_tag=GCA000010485_00697;product=citrate synthase;Dbxref=GO:0004108,GO:0005737,GO:0006099;gene=gltA;Parent=GCA000010485_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,RefSeq:WP_000785832.1,SO:0001217,UniParc:UPI00018880BA,UniRef:UniRef100_A0A061KSA4,UniRef:UniRef50_P0ABH7,UniRef:UniRef90_P0ABH7;ec_number=2.3.3.16
contig_1	Pyrodigal	gene	724829	724936	.	-	.	ID=GCA000010485_00698_gene;locus_tag=GCA000010485_00698;gene=ybgU
contig_1	Pyrodigal	CDS	724829	724936	.	-	0	ID=GCA000010485_00698;Name=Protein YbgU;locus_tag=GCA000010485_00698;product=Protein YbgU;gene=ybgU;Parent=GCA000010485_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001305582.1,SO:0001217,UniParc:UPI0001A5C00D,UniRef:UniRef100_P0DPN5,UniRef:UniRef50_P0DPN5,UniRef:UniRef90_P0DPN5
contig_1	Pyrodigal	gene	725317	725721	.	+	.	ID=GCA000010485_00699_gene;locus_tag=GCA000010485_00699;gene=sdhC
contig_1	Pyrodigal	CDS	725317	725721	.	+	0	ID=GCA000010485_00699;Name=succinate dehydrogenase cytochrome b556 subunit;locus_tag=GCA000010485_00699;product=succinate dehydrogenase cytochrome b556 subunit;Dbxref=GO:0000104,GO:0005886,GO:0006099,GO:0008177,GO:0009055,GO:0009060,GO:0016020,GO:0017004,GO:0019646,GO:0020037,GO:0045273,GO:0046872,GO:0048039;gene=sdhC;Parent=GCA000010485_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2009,RefSeq:WP_000263355.1,SO:0001217,UniParc:UPI00000DE8A3,UniRef:UniRef100_A0A061LT52,UniRef:UniRef50_P69054,UniRef:UniRef90_P69054;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	725715	726062	.	+	.	ID=GCA000010485_00700_gene;locus_tag=GCA000010485_00700;gene=sdhD
contig_1	Pyrodigal	CDS	725715	726062	.	+	0	ID=GCA000010485_00700;Name=succinate dehydrogenase membrane anchor subunit;locus_tag=GCA000010485_00700;product=succinate dehydrogenase membrane anchor subunit;Dbxref=GO:0005886,GO:0006099,GO:0009055,GO:0009060,GO:0016020,GO:0017004,GO:0019646,GO:0020037,GO:0046872;gene=sdhD;Parent=GCA000010485_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2142,RefSeq:WP_000254365.1,SO:0001217,UniParc:UPI00001127A8,UniRef:UniRef100_P0AC44,UniRef:UniRef50_P0AC44,UniRef:UniRef90_P0AC44
contig_1	Pyrodigal	gene	726062	727828	.	+	.	ID=GCA000010485_00701_gene;locus_tag=GCA000010485_00701;gene=sdhA
contig_1	Pyrodigal	CDS	726062	727828	.	+	0	ID=GCA000010485_00701;Name=succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000010485_00701;product=succinate dehydrogenase flavoprotein subunit;Dbxref=GO:0000104,GO:0005886,GO:0006099,GO:0008177,GO:0009055,GO:0009060,GO:0009061,GO:0016020,GO:0016627,GO:0019646,GO:0045273,GO:0050660;gene=sdhA;Parent=GCA000010485_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000775540.1,SO:0001217,UniParc:UPI00001127A5,UniRef:UniRef100_P0AC41,UniRef:UniRef50_P0AC41,UniRef:UniRef90_P0AC41;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	727844	728560	.	+	.	ID=GCA000010485_00702_gene;locus_tag=GCA000010485_00702;gene=sdhB
contig_1	Pyrodigal	CDS	727844	728560	.	+	0	ID=GCA000010485_00702;Name=succinate dehydrogenase iron-sulfur subunit SdhB;locus_tag=GCA000010485_00702;product=succinate dehydrogenase iron-sulfur subunit SdhB;Dbxref=GO:0005886,GO:0006099,GO:0008177,GO:0009055,GO:0009060,GO:0016020,GO:0019646,GO:0022904,GO:0046872,GO:0051536,GO:0051537,GO:0051538,GO:0051539;gene=sdhB;Parent=GCA000010485_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001235254,COG:C,COG:COG0479,RefSeq:WP_001235263.1,SO:0001217,UniParc:UPI000000DF58,UniRef:UniRef100_C3TIN2,UniRef:UniRef50_P07014,UniRef:UniRef90_P07014;ec_number=1.3.5.1
contig_1	Infernal	gene	728567	728637	.	-	.	ID=GCA000010485_00703_gene;locus_tag=GCA000010485_00703;gene=naRNA4
contig_1	Infernal	ncRNA	728567	728637	3.5e-13	-	.	ID=GCA000010485_00703;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00703;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00703_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	728662	728732	.	-	.	ID=GCA000010485_00704_gene;locus_tag=GCA000010485_00704;gene=naRNA4
contig_1	Infernal	ncRNA	728662	728732	6.9e-12	-	.	ID=GCA000010485_00704;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00704;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00704_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	728922	731723	.	+	.	ID=GCA000010485_00705_gene;locus_tag=GCA000010485_00705;gene=sucA
contig_1	Pyrodigal	CDS	728922	731723	.	+	0	ID=GCA000010485_00705;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000010485_00705;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0000166,GO:0000287,GO:0004591,GO:0005737,GO:0005829,GO:0006099,GO:0030976,GO:0042802,GO:0045252;gene=sucA;Parent=GCA000010485_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_001181475.1,SO:0001217,UniParc:UPI0001C22A9E,UniRef:UniRef100_A0A066T2A4,UniRef:UniRef50_P0AFG3,UniRef:UniRef90_P0AFG3;ec_number=1.2.4.2
contig_1	Pyrodigal	gene	731738	732955	.	+	.	ID=GCA000010485_00706_gene;locus_tag=GCA000010485_00706;gene=odhB
contig_1	Pyrodigal	CDS	731738	732955	.	+	0	ID=GCA000010485_00706;Name=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000010485_00706;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0006099,GO:0045252;gene=odhB;Parent=GCA000010485_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000099866.1,SO:0001217,UniParc:UPI0001C22A9F,UniRef:UniRef100_A0A061YGN4,UniRef:UniRef50_P0AFG6,UniRef:UniRef90_A0A099AT33;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	733049	734215	.	+	.	ID=GCA000010485_00707_gene;locus_tag=GCA000010485_00707;gene=sucC
contig_1	Pyrodigal	CDS	733049	734215	.	+	0	ID=GCA000010485_00707;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000010485_00707;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000010485_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_001048602.1,SO:0001217,UniParc:UPI0000111F92,UniRef:UniRef100_P0A836,UniRef:UniRef50_P0A836,UniRef:UniRef90_P0A836;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	734215	735084	.	+	.	ID=GCA000010485_00708_gene;locus_tag=GCA000010485_00708;gene=sucD
contig_1	Pyrodigal	CDS	734215	735084	.	+	0	ID=GCA000010485_00708;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000010485_00708;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0005737,GO:0005829,GO:0006099,GO:0009361;gene=sucD;Parent=GCA000010485_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_000025458.1,SO:0001217,UniParc:UPI00001653CD,UniRef:UniRef100_P0AGE9,UniRef:UniRef50_P0AGE9,UniRef:UniRef90_P0AGE9;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	735188	735910	.	-	.	ID=GCA000010485_00709_gene;locus_tag=GCA000010485_00709;gene=mngR
contig_1	Pyrodigal	CDS	735188	735910	.	-	0	ID=GCA000010485_00709;Name=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;locus_tag=GCA000010485_00709;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;Dbxref=GO:0003677,GO:0003700,GO:0009408,GO:0045892;gene=mngR;Parent=GCA000010485_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000509902,KEGG:K11922,RefSeq:WP_000509910.1,SO:0001217,UniParc:UPI0001C22AA0,UniRef:UniRef100_A0A066SY74,UniRef:UniRef50_P13669,UniRef:UniRef90_P13669
contig_1	Pyrodigal	gene	736079	737995	.	+	.	ID=GCA000010485_00710_gene;locus_tag=GCA000010485_00710;gene=mngA
contig_1	Pyrodigal	CDS	736079	737995	.	+	0	ID=GCA000010485_00710;Name=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;locus_tag=GCA000010485_00710;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;Dbxref=GO:0005351,GO:0005886,GO:0009401,GO:0016020,GO:0016301,GO:0022877,GO:0051476,GO:0090563,GO:0090581;gene=mngA;Parent=GCA000010485_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001054880.1,SO:0001217,UniParc:UPI0001C22AA1,UniRef:UniRef100_UPI0001C22AA1,UniRef:UniRef50_P54745,UniRef:UniRef90_P54745;ec_number=2.7.1.195
contig_1	Pyrodigal	gene	738013	740646	.	+	.	ID=GCA000010485_00711_gene;locus_tag=GCA000010485_00711;gene=mngB
contig_1	Pyrodigal	CDS	738013	740646	.	+	0	ID=GCA000010485_00711;Name=mannosylglycerate hydrolase;locus_tag=GCA000010485_00711;product=mannosylglycerate hydrolase;Dbxref=GO:0004559,GO:0006013,GO:0009313,GO:0030246,GO:0046872;gene=mngB;Parent=GCA000010485_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000648958.1,SO:0001217,UniParc:UPI0001C22AA2,UniRef:UniRef100_A0A7I0KSH0,UniRef:UniRef50_P54746,UniRef:UniRef90_P54746;ec_number=3.2.1.170
contig_1	Pyrodigal	gene	740844	742037	.	+	.	ID=GCA000010485_00712_gene;locus_tag=GCA000010485_00712
contig_1	Pyrodigal	CDS	740844	742037	.	+	0	ID=GCA000010485_00712;Name=Tetratricopeptide repeat protein;locus_tag=GCA000010485_00712;product=Tetratricopeptide repeat protein;Parent=GCA000010485_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000725054.1,SO:0001217,UniParc:UPI0001C22AA3,UniRef:UniRef100_A0A066T6P3,UniRef:UniRef50_A0AAJ2FTE8,UniRef:UniRef90_A0A5R8UIF6
contig_1	Pyrodigal	gene	743580	745148	.	+	.	ID=GCA000010485_00713_gene;locus_tag=GCA000010485_00713;gene=cydA
contig_1	Pyrodigal	CDS	743580	745148	.	+	0	ID=GCA000010485_00713;Name=cytochrome ubiquinol oxidase subunit I;locus_tag=GCA000010485_00713;product=cytochrome ubiquinol oxidase subunit I;Dbxref=GO:0005886,GO:0009055,GO:0016682,GO:0019646,GO:0020037,GO:0046872,GO:0070069;gene=cydA;Parent=GCA000010485_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_000884361.1,SO:0001217,UniParc:UPI0000128BE9,UniRef:UniRef100_P0ABJ9,UniRef:UniRef50_P0ABJ9,UniRef:UniRef90_P0ABJ9;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	745164	746303	.	+	.	ID=GCA000010485_00714_gene;locus_tag=GCA000010485_00714;gene=cydB
contig_1	Pyrodigal	CDS	745164	746303	.	+	0	ID=GCA000010485_00714;Name=cytochrome d ubiquinol oxidase subunit II;locus_tag=GCA000010485_00714;product=cytochrome d ubiquinol oxidase subunit II;Dbxref=GO:0005886,GO:0006119,GO:0009055,GO:0016020,GO:0016682,GO:0019646,GO:0046872,GO:0070069;gene=cydB;Parent=GCA000010485_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_000568275.1,SO:0001217,UniParc:UPI0000047CA7,UniRef:UniRef100_P0ABK2,UniRef:UniRef50_P0ABK2,UniRef:UniRef90_P0ABK2;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	746318	746431	.	+	.	ID=GCA000010485_00715_gene;locus_tag=GCA000010485_00715;gene=cydX
contig_1	Pyrodigal	CDS	746318	746431	.	+	0	ID=GCA000010485_00715;Name=cytochrome bd-I oxidase subunit CydX;locus_tag=GCA000010485_00715;product=cytochrome bd-I oxidase subunit CydX;Dbxref=GO:0005886,GO:0006119,GO:0016020,GO:0016679,GO:0016682,GO:0019646,GO:0019867,GO:0070069;gene=cydX;Parent=GCA000010485_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4890,COG:S,KEGG:K00424,RefSeq:WP_000270282.1,SO:0001217,UniParc:UPI000013A341,UniRef:UniRef100_P56100,UniRef:UniRef50_P56100,UniRef:UniRef90_P56100;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	746431	746724	.	+	.	ID=GCA000010485_00716_gene;locus_tag=GCA000010485_00716;gene=ybgE
contig_1	Pyrodigal	CDS	746431	746724	.	+	0	ID=GCA000010485_00716;Name=cyd operon protein YbgE;locus_tag=GCA000010485_00716;product=cyd operon protein YbgE;gene=ybgE;Parent=GCA000010485_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3790,COG:S,RefSeq:WP_000034597.1,SO:0001217,UniParc:UPI0001C22AA4,UniRef:UniRef100_A0A066SYK7,UniRef:UniRef50_P0AAV0,UniRef:UniRef90_P0AAV0
contig_1	Pyrodigal	gene	746874	747278	.	+	.	ID=GCA000010485_00717_gene;locus_tag=GCA000010485_00717;gene=ybgC
contig_1	Pyrodigal	CDS	746874	747278	.	+	0	ID=GCA000010485_00717;Name=tol-pal system-associated acyl-CoA thioesterase;locus_tag=GCA000010485_00717;product=tol-pal system-associated acyl-CoA thioesterase;Dbxref=GO:0005886,GO:0006629,GO:0047617;gene=ybgC;Parent=GCA000010485_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,KEGG:K07107,RefSeq:WP_001098384.1,SO:0001217,UniParc:UPI000013A32F,UniRef:UniRef100_P0A8Z3,UniRef:UniRef50_P0A8Z3,UniRef:UniRef90_P0A8Z3;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	747275	747967	.	+	.	ID=GCA000010485_00718_gene;locus_tag=GCA000010485_00718;gene=tolQ
contig_1	Pyrodigal	CDS	747275	747967	.	+	0	ID=GCA000010485_00718;Name=Tol-Pal system protein TolQ;locus_tag=GCA000010485_00718;product=Tol-Pal system protein TolQ;Dbxref=GO:0005886,GO:0017038,GO:0043213,GO:0051301;gene=tolQ;Parent=GCA000010485_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_000131310.1,SO:0001217,UniParc:UPI00000DE8AB,UniRef:UniRef100_A0A0D6I9X8,UniRef:UniRef50_P0ABU9,UniRef:UniRef90_P0ABU9
contig_1	Pyrodigal	gene	747971	748399	.	+	.	ID=GCA000010485_00719_gene;locus_tag=GCA000010485_00719;gene=tolR
contig_1	Pyrodigal	CDS	747971	748399	.	+	0	ID=GCA000010485_00719;Name=colicin uptake protein TolR;locus_tag=GCA000010485_00719;product=colicin uptake protein TolR;Dbxref=GO:0005886,GO:0015031,GO:0022857,GO:0051301;gene=tolR;Parent=GCA000010485_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_000090097.1,SO:0001217,UniParc:UPI0000137114,UniRef:UniRef100_P0ABV6,UniRef:UniRef50_P0ABV6,UniRef:UniRef90_P0ABV6
contig_1	Pyrodigal	gene	748464	749774	.	+	.	ID=GCA000010485_00720_gene;locus_tag=GCA000010485_00720;gene=tolA
contig_1	Pyrodigal	CDS	748464	749774	.	+	0	ID=GCA000010485_00720;Name=cell envelope integrity protein TolA;locus_tag=GCA000010485_00720;product=cell envelope integrity protein TolA;Dbxref=GO:0016020,GO:0019534,GO:0043213;gene=tolA;Parent=GCA000010485_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03646,RefSeq:WP_000030659.1,SO:0001217,UniParc:UPI0001C22AA5,UniRef:UniRef100_A0A061YHL4,UniRef:UniRef50_P19934,UniRef:UniRef90_A0A0J2B548
contig_1	Pyrodigal	gene	749907	751199	.	+	.	ID=GCA000010485_00721_gene;locus_tag=GCA000010485_00721;gene=tolB
contig_1	Pyrodigal	CDS	749907	751199	.	+	0	ID=GCA000010485_00721;Name=Tol-Pal system protein TolB;locus_tag=GCA000010485_00721;product=Tol-Pal system protein TolB;Dbxref=GO:0005215,GO:0017038,GO:0042597,GO:0051301;gene=tolB;Parent=GCA000010485_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010989131,COG:COG0823,COG:U,RefSeq:WP_001295307.1,SO:0001217,UniParc:UPI000013710A,UniRef:UniRef100_P0A855,UniRef:UniRef50_P0A855,UniRef:UniRef90_P0A855
contig_1	Pyrodigal	gene	751234	751755	.	+	.	ID=GCA000010485_00722_gene;locus_tag=GCA000010485_00722;gene=pal
contig_1	Pyrodigal	CDS	751234	751755	.	+	0	ID=GCA000010485_00722;Name=peptidoglycan-associated lipoprotein Pal;locus_tag=GCA000010485_00722;product=peptidoglycan-associated lipoprotein Pal;Dbxref=GO:0009279,GO:0016020,GO:0032153,GO:0051301,GO:0090529,GO:1905153;gene=pal;Parent=GCA000010485_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_001295883.1,SO:0001217,UniParc:UPI0000DACD8C,UniRef:UniRef100_E2QIB4,UniRef:UniRef50_P0A912,UniRef:UniRef90_P0A912
contig_1	Infernal	regulatory_region	751656	751794	1.3e-26	+	.	ID=EFPPCJGBKI_284;Name=CpoB/ybgF ICR thermometer;product=CpoB/ybgF ICR thermometer;Dbxref=RFAM:RF02782;inference=profile:Rfam:RF02782;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	751765	752556	.	+	.	ID=GCA000010485_00723_gene;locus_tag=GCA000010485_00723;gene=cpoB
contig_1	Pyrodigal	CDS	751765	752556	.	+	0	ID=GCA000010485_00723;Name=cell division protein CpoB;locus_tag=GCA000010485_00723;product=cell division protein CpoB;Dbxref=GO:0005515,GO:0030288,GO:0032991,GO:0043093,GO:0051301,GO:0070206;gene=cpoB;Parent=GCA000010485_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1729,COG:D,RefSeq:WP_000097575.1,SO:0001217,UniParc:UPI0001C22AA6,UniRef:UniRef100_A0A3K0JYS3,UniRef:UniRef50_P45955,UniRef:UniRef90_P45955
contig_1	tRNAscan-SE	gene	752721	752796	.	+	.	ID=GCA000010485_00724_gene;locus_tag=GCA000010485_00724;gene=trnK
contig_1	tRNAscan-SE	tRNA	752721	752796	.	+	.	ID=GCA000010485_00724;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_00724;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_00724_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	752832	752907	.	+	.	ID=GCA000010485_00725_gene;locus_tag=GCA000010485_00725;gene=trnV
contig_1	tRNAscan-SE	tRNA	752832	752907	.	+	.	ID=GCA000010485_00725;Name=tRNA-Val(tac);locus_tag=GCA000010485_00725;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000010485_00725_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	752910	752985	.	+	.	ID=GCA000010485_00726_gene;locus_tag=GCA000010485_00726;gene=trnK
contig_1	tRNAscan-SE	tRNA	752910	752985	.	+	.	ID=GCA000010485_00726;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_00726;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_00726_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	753037	753112	.	+	.	ID=GCA000010485_00727_gene;locus_tag=GCA000010485_00727;gene=trnV
contig_1	tRNAscan-SE	tRNA	753037	753112	.	+	.	ID=GCA000010485_00727;Name=tRNA-Val(tac);locus_tag=GCA000010485_00727;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000010485_00727_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	753116	753191	.	+	.	ID=GCA000010485_00728_gene;locus_tag=GCA000010485_00728;gene=trnK
contig_1	tRNAscan-SE	tRNA	753116	753191	.	+	.	ID=GCA000010485_00728;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_00728;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_00728_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	753240	753315	.	+	.	ID=GCA000010485_00729_gene;locus_tag=GCA000010485_00729;gene=trnK
contig_1	tRNAscan-SE	tRNA	753240	753315	.	+	.	ID=GCA000010485_00729;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_00729;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_00729_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	753349	753424	.	+	.	ID=GCA000010485_00730_gene;locus_tag=GCA000010485_00730;gene=trnK
contig_1	tRNAscan-SE	tRNA	753349	753424	.	+	.	ID=GCA000010485_00730;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_00730;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_00730_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	753702	754745	.	+	.	ID=GCA000010485_00731_gene;locus_tag=GCA000010485_00731;gene=nadA
contig_1	Pyrodigal	CDS	753702	754745	.	+	0	ID=GCA000010485_00731;Name=quinolinate synthase NadA;locus_tag=GCA000010485_00731;product=quinolinate synthase NadA;Dbxref=GO:0005829,GO:0008987,GO:0009435,GO:0034628,GO:0046872,GO:0051539;gene=nadA;Parent=GCA000010485_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0379,COG:H,KEGG:K03517,RefSeq:WP_000115261.1,SO:0001217,UniParc:UPI0001C22AD6,UniRef:UniRef100_A0A066T6L1,UniRef:UniRef50_P11458,UniRef:UniRef90_P11458;ec_number=2.5.1.72
contig_1	Pyrodigal	gene	754783	755502	.	+	.	ID=GCA000010485_00732_gene;locus_tag=GCA000010485_00732;gene=pnuC
contig_1	Pyrodigal	CDS	754783	755502	.	+	0	ID=GCA000010485_00732;Name=nicotinamide riboside transporter PnuC;locus_tag=GCA000010485_00732;product=nicotinamide riboside transporter PnuC;Dbxref=GO:0005886,GO:0015663,GO:0015890,GO:0016020,GO:0034257;gene=pnuC;Parent=GCA000010485_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000345410,COG:COG3201,COG:H,RefSeq:WP_000345405.1,SO:0001217,UniParc:UPI0001C22AD7,UniRef:UniRef100_A0A061KUT1,UniRef:UniRef50_P0AFK2,UniRef:UniRef90_P0AFK2
contig_1	Pyrodigal	gene	755499	756440	.	-	.	ID=GCA000010485_00733_gene;locus_tag=GCA000010485_00733;gene=zitB
contig_1	Pyrodigal	CDS	755499	756440	.	-	0	ID=GCA000010485_00733;Name=CDF family zinc transporter ZitB;locus_tag=GCA000010485_00733;product=CDF family zinc transporter ZitB;Dbxref=GO:0005385,GO:0005886,GO:0006829,GO:0016020,GO:0055085;gene=zitB;Parent=GCA000010485_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1230,COG:P,RefSeq:WP_000951272.1,SO:0001217,UniParc:UPI0001C22AD8,UniRef:UniRef100_A0A061YDP9,UniRef:UniRef50_P75757,UniRef:UniRef90_P75757
contig_1	Pyrodigal	gene	756554	756934	.	-	.	ID=GCA000010485_00734_gene;locus_tag=GCA000010485_00734;gene=ybgS
contig_1	Pyrodigal	CDS	756554	756934	.	-	0	ID=GCA000010485_00734;Name=putative protein YbgS;locus_tag=GCA000010485_00734;product=putative protein YbgS;gene=ybgS;Parent=GCA000010485_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784348.1,SO:0001217,UniParc:UPI00000D0878,UniRef:UniRef100_C3TIE7,UniRef:UniRef50_P0AAV6,UniRef:UniRef90_P0AAV6
contig_1	Pyrodigal	gene	757250	758302	.	+	.	ID=GCA000010485_00735_gene;locus_tag=GCA000010485_00735;gene=aroG
contig_1	Pyrodigal	CDS	757250	758302	.	+	0	ID=GCA000010485_00735;Name=3-deoxy-7-phosphoheptulonate synthase AroG;locus_tag=GCA000010485_00735;product=3-deoxy-7-phosphoheptulonate synthase AroG;Dbxref=GO:0003849,GO:0005737,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0042802;gene=aroG;Parent=GCA000010485_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001109196,COG:COG0722,COG:E,KEGG:K01626,RefSeq:WP_001109194.1,SO:0001217,UniParc:UPI00016A156F,UniRef:UniRef100_A0A061KPI6,UniRef:UniRef50_P0AB91,UniRef:UniRef90_P0AB91;ec_number=2.5.1.54
contig_1	Pyrodigal	gene	758469	759221	.	-	.	ID=GCA000010485_00736_gene;locus_tag=GCA000010485_00736;gene=gpmA
contig_1	Pyrodigal	CDS	758469	759221	.	-	0	ID=GCA000010485_00736;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA000010485_00736;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;Dbxref=GO:0004619,GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000010485_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_001295305.1,SO:0001217,UniParc:UPI00001653CF,UniRef:UniRef100_P62707,UniRef:UniRef50_P62707,UniRef:UniRef90_P62707;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	759424	760464	.	-	.	ID=GCA000010485_00737_gene;locus_tag=GCA000010485_00737;gene=galM
contig_1	Pyrodigal	CDS	759424	760464	.	-	0	ID=GCA000010485_00737;Name=galactose-1-epimerase;locus_tag=GCA000010485_00737;product=galactose-1-epimerase;Dbxref=GO:0004034,GO:0005737,GO:0006006,GO:0006012,GO:0030246,GO:0033499;gene=galM;Parent=GCA000010485_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_000931396.1,SO:0001217,UniParc:UPI00000DE8B5,UniRef:UniRef100_E2QIC2,UniRef:UniRef50_P0A9C3,UniRef:UniRef90_P0A9C3;ec_number=5.1.3.3
contig_1	Pyrodigal	gene	760458	761606	.	-	.	ID=GCA000010485_00738_gene;locus_tag=GCA000010485_00738;gene=galK
contig_1	Pyrodigal	CDS	760458	761606	.	-	0	ID=GCA000010485_00738;Name=galactokinase;locus_tag=GCA000010485_00738;product=galactokinase;Dbxref=GO:0000287,GO:0004335,GO:0005524,GO:0005829,GO:0006012,GO:0046835;gene=galK;Parent=GCA000010485_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0153,COG:G,RefSeq:WP_000053415.1,SO:0001217,UniParc:UPI00000480BE,UniRef:UniRef100_P0A6T3,UniRef:UniRef50_P0A6T3,UniRef:UniRef90_P0A6T3;ec_number=2.7.1.6
contig_1	Pyrodigal	gene	761610	762656	.	-	.	ID=GCA000010485_00739_gene;locus_tag=GCA000010485_00739;gene=galT
contig_1	Pyrodigal	CDS	761610	762656	.	-	0	ID=GCA000010485_00739;Name=galactose-1-phosphate uridylyltransferase;locus_tag=GCA000010485_00739;product=galactose-1-phosphate uridylyltransferase;Dbxref=GO:0004335,GO:0005737,GO:0005829,GO:0006012,GO:0008108,GO:0008198,GO:0008270,GO:0033499;gene=galT;Parent=GCA000010485_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1085,COG:G,RefSeq:WP_000191512.1,SO:0001217,UniParc:UPI0001887EE2,UniRef:UniRef100_A0A061YLT2,UniRef:UniRef50_P09148,UniRef:UniRef90_P09148;ec_number=2.7.7.12
contig_1	Pyrodigal	gene	762666	763682	.	-	.	ID=GCA000010485_00740_gene;locus_tag=GCA000010485_00740;gene=galE
contig_1	Pyrodigal	CDS	762666	763682	.	-	0	ID=GCA000010485_00740;Name=UDP-glucose 4-epimerase GalE;locus_tag=GCA000010485_00740;product=UDP-glucose 4-epimerase GalE;Dbxref=GO:0003978,GO:0006012;gene=galE;Parent=GCA000010485_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1087,COG:M,RefSeq:WP_001265440.1,SO:0001217,UniParc:UPI0001C22AD9,UniRef:UniRef100_A0A066T2E7,UniRef:UniRef50_P09147,UniRef:UniRef90_A0A7H0MBE0;ec_number=5.1.3.2
contig_1	Pyrodigal	gene	763945	765417	.	-	.	ID=GCA000010485_00741_gene;locus_tag=GCA000010485_00741;gene=modF
contig_1	Pyrodigal	CDS	763945	765417	.	-	0	ID=GCA000010485_00741;Name=molybdate ABC transporter ATP-binding protein ModF;locus_tag=GCA000010485_00741;product=molybdate ABC transporter ATP-binding protein ModF;Dbxref=GO:0005524,GO:0006281,GO:0016887,GO:0042626,GO:0043190;gene=modF;Parent=GCA000010485_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1119,COG:P,RefSeq:WP_000096849.1,SO:0001217,UniParc:UPI0001C22ADA,UniRef:UniRef100_A0A061KU80,UniRef:UniRef50_P31060,UniRef:UniRef90_P31060
contig_1	Pyrodigal	gene	765485	766273	.	-	.	ID=GCA000010485_00742_gene;locus_tag=GCA000010485_00742;gene=modE
contig_1	Pyrodigal	CDS	765485	766273	.	-	0	ID=GCA000010485_00742;Name=molybdenum-dependent transcriptional regulator;locus_tag=GCA000010485_00742;product=molybdenum-dependent transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0015689,GO:0030151;gene=modE;Parent=GCA000010485_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3585,COG:H,KEGG:K02019,RefSeq:WP_001147439.1,SO:0001217,UniParc:UPI00001133F3,UniRef:UniRef100_P0A9G8,UniRef:UniRef50_P0A9G8,UniRef:UniRef90_P0A9G8
contig_1	Pyrodigal	gene	766402	766551	.	+	.	ID=GCA000010485_00743_gene;locus_tag=GCA000010485_00743;gene=acrZ
contig_1	Pyrodigal	CDS	766402	766551	.	+	0	ID=GCA000010485_00743;Name=multidrug efflux pump accessory protein AcrZ;locus_tag=GCA000010485_00743;product=multidrug efflux pump accessory protein AcrZ;Dbxref=GO:0005886,GO:0042910,GO:0046677,GO:1990961;gene=acrZ;Parent=GCA000010485_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000891515,KEGG:K25859,RefSeq:WP_000891515.1,SO:0001217,UniParc:UPI000013A360,UniRef:UniRef100_P0AAW9,UniRef:UniRef50_P0AAW9,UniRef:UniRef90_P0AAW9
contig_1	Pyrodigal	gene	766718	767491	.	+	.	ID=GCA000010485_00744_gene;locus_tag=GCA000010485_00744;gene=modA
contig_1	Pyrodigal	CDS	766718	767491	.	+	0	ID=GCA000010485_00744;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000010485_00744;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015412,GO:0015689,GO:0016020,GO:0030151,GO:0030288,GO:0030973,GO:0046687,GO:0055052,GO:0070614,GO:1901359;gene=modA;Parent=GCA000010485_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_000113014.1,SO:0001217,UniParc:UPI00000E49B9,UniRef:UniRef100_E2QIC9,UniRef:UniRef50_P37329,UniRef:UniRef90_P37329;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	767491	768180	.	+	.	ID=GCA000010485_00745_gene;locus_tag=GCA000010485_00745;gene=modB
contig_1	Pyrodigal	CDS	767491	768180	.	+	0	ID=GCA000010485_00745;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000010485_00745;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015098,GO:0015689,GO:0016020,GO:0055052,GO:0070614;gene=modB;Parent=GCA000010485_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_000604037.1,SO:0001217,UniParc:UPI00005EFCC9,UniRef:UniRef100_E2QID0,UniRef:UniRef50_P0AF01,UniRef:UniRef90_P0AF01;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	768183	769241	.	+	.	ID=GCA000010485_00746_gene;locus_tag=GCA000010485_00746;gene=modC
contig_1	Pyrodigal	CDS	768183	769241	.	+	0	ID=GCA000010485_00746;Name=molybdenum ABC transporter ATP-binding protein ModC;locus_tag=GCA000010485_00746;product=molybdenum ABC transporter ATP-binding protein ModC;Dbxref=GO:0005524,GO:0005886,GO:0015098,GO:0015412,GO:0015689,GO:0016020,GO:0016887;gene=modC;Parent=GCA000010485_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_000891663.1,SO:0001217,UniParc:UPI0001C22ADB,UniRef:UniRef100_A0A061YL04,UniRef:UniRef50_P09833,UniRef:UniRef90_P09833;ec_number=7.3.2.5
contig_1	Pyrodigal	gene	769242	770060	.	-	.	ID=GCA000010485_00747_gene;locus_tag=GCA000010485_00747;gene=ybhA
contig_1	Pyrodigal	CDS	769242	770060	.	-	0	ID=GCA000010485_00747;Name=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;locus_tag=GCA000010485_00747;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;Dbxref=GO:0000287,GO:0005829,GO:0016773,GO:0016787,GO:0016791,GO:0032361,GO:0033883,GO:0050308;gene=ybhA;Parent=GCA000010485_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300666,KEGG:K21064,RefSeq:WP_001295884.1,SO:0001217,UniParc:UPI0000DACD8E,UniRef:UniRef100_A0A061YHJ1,UniRef:UniRef50_P21829,UniRef:UniRef90_P21829;ec_number=3.1.3.74
contig_1	Pyrodigal	gene	770215	771210	.	+	.	ID=GCA000010485_00748_gene;locus_tag=GCA000010485_00748;gene=pgl
contig_1	Pyrodigal	CDS	770215	771210	.	+	0	ID=GCA000010485_00748;Name=6-phosphogluconolactonase;locus_tag=GCA000010485_00748;product=6-phosphogluconolactonase;Dbxref=GO:0005829,GO:0006006,GO:0009051,GO:0017057;gene=pgl;Parent=GCA000010485_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2706,COG:G,RefSeq:WP_000815435.1,SO:0001217,UniParc:UPI000013A34B,UniRef:UniRef100_P52697,UniRef:UniRef50_P52697,UniRef:UniRef90_P52697;ec_number=3.1.1.31
contig_1	Pyrodigal	gene	771251	772204	.	-	.	ID=GCA000010485_00749_gene;locus_tag=GCA000010485_00749;gene=ybhD
contig_1	Pyrodigal	CDS	771251	772204	.	-	0	ID=GCA000010485_00749;Name=putative HTH-type transcriptional regulator YbhD;locus_tag=GCA000010485_00749;product=putative HTH-type transcriptional regulator YbhD;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355;gene=ybhD;Parent=GCA000010485_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295885.1,SO:0001217,UniParc:UPI000214D09A,UniRef:UniRef100_A0A061YLS2,UniRef:UniRef50_P52696,UniRef:UniRef90_P52696
contig_1	Pyrodigal	gene	772388	773440	.	+	.	ID=GCA000010485_00750_gene;locus_tag=GCA000010485_00750;gene=ybhH
contig_1	Pyrodigal	CDS	772388	773440	.	+	0	ID=GCA000010485_00750;Name=4-oxalomesaconate tautomerase;locus_tag=GCA000010485_00750;product=4-oxalomesaconate tautomerase;Dbxref=GO:0016853;gene=ybhH;Parent=GCA000010485_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000723652.1,SO:0001217,UniParc:UPI000013A351,UniRef:UniRef100_P0AAV8,UniRef:UniRef50_P0AAV8,UniRef:UniRef90_P0AAV8;ec_number=5.3.2.8
contig_1	Pyrodigal	gene	773516	774949	.	+	.	ID=GCA000010485_00751_gene;locus_tag=GCA000010485_00751
contig_1	Pyrodigal	CDS	773516	774949	.	+	0	ID=GCA000010485_00751;Name=Anion permease;locus_tag=GCA000010485_00751;product=Anion permease;Parent=GCA000010485_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03319,RefSeq:WP_001036491.1,SO:0001217,UniParc:UPI00000DE8C0,UniRef:UniRef100_E2QID6,UniRef:UniRef50_P75763,UniRef:UniRef90_E2QID6
contig_1	Pyrodigal	gene	775132	777393	.	+	.	ID=GCA000010485_00752_gene;locus_tag=GCA000010485_00752;gene=ybhJ
contig_1	Pyrodigal	CDS	775132	777393	.	+	0	ID=GCA000010485_00752;Name=hydratase;locus_tag=GCA000010485_00752;product=hydratase;Dbxref=GO:0003994,GO:0005829,GO:0006099,GO:0006979,GO:0046872,GO:0051539;gene=ybhJ;Parent=GCA000010485_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000593914.1,SO:0001217,UniParc:UPI0001C22ADD,UniRef:UniRef100_A0A061KUR3,UniRef:UniRef50_P75764,UniRef:UniRef90_P75764
contig_1	Pyrodigal	gene	777534	778817	.	-	.	ID=GCA000010485_00753_gene;locus_tag=GCA000010485_00753;gene=ybhC
contig_1	Pyrodigal	CDS	777534	778817	.	-	0	ID=GCA000010485_00753;Name=putative acyl-CoA thioester hydrolase;locus_tag=GCA000010485_00753;product=putative acyl-CoA thioester hydrolase;Dbxref=GO:0009279,GO:0030599,GO:0042545,GO:0052689;gene=ybhC;Parent=GCA000010485_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001091562.1,SO:0001217,UniParc:UPI00000E49BA,UniRef:UniRef100_A0A023KV23,UniRef:UniRef50_P46130,UniRef:UniRef90_P46130;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	778969	779445	.	-	.	ID=GCA000010485_00754_gene;locus_tag=GCA000010485_00754;gene=ybhB
contig_1	Pyrodigal	CDS	778969	779445	.	-	0	ID=GCA000010485_00754;Name=kinase inhibitor;locus_tag=GCA000010485_00754;product=kinase inhibitor;Dbxref=GO:0005737;gene=ybhB;Parent=GCA000010485_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1881,COG:R,RefSeq:WP_000767411.1,SO:0001217,UniParc:UPI00000DE8C2,UniRef:UniRef100_E2QID9,UniRef:UniRef50_P12994,UniRef:UniRef90_P12994
contig_1	Pyrodigal	gene	779504	780793	.	-	.	ID=GCA000010485_00755_gene;locus_tag=GCA000010485_00755;gene=bioA
contig_1	Pyrodigal	CDS	779504	780793	.	-	0	ID=GCA000010485_00755;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000010485_00755;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170,GO:0042803;gene=bioA;Parent=GCA000010485_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,RefSeq:WP_001295886.1,SO:0001217,UniParc:UPI0001C22ADE,UniRef:UniRef100_A0A1U9U0T0,UniRef:UniRef50_P12995,UniRef:UniRef90_P12995;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	780880	781920	.	+	.	ID=GCA000010485_00756_gene;locus_tag=GCA000010485_00756;gene=bioB
contig_1	Pyrodigal	CDS	780880	781920	.	+	0	ID=GCA000010485_00756;Name=biotin synthase BioB;locus_tag=GCA000010485_00756;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000010485_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_000951213.1,SO:0001217,UniParc:UPI000002C675,UniRef:UniRef100_P12996,UniRef:UniRef50_P12996,UniRef:UniRef90_P12996;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	781917	783071	.	+	.	ID=GCA000010485_00757_gene;locus_tag=GCA000010485_00757;gene=bioF
contig_1	Pyrodigal	CDS	781917	783071	.	+	0	ID=GCA000010485_00757;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000010485_00757;product=8-amino-7-oxononanoate synthase;Dbxref=GO:0008710,GO:0009102,GO:0030170;gene=bioF;Parent=GCA000010485_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000118852.1,SO:0001217,UniParc:UPI0001C22ADF,UniRef:UniRef100_A0A061YHH9,UniRef:UniRef50_P12998,UniRef:UniRef90_P12998;ec_number=2.3.1.47
contig_1	Pyrodigal	gene	783058	783813	.	+	.	ID=GCA000010485_00758_gene;locus_tag=GCA000010485_00758;gene=bioC
contig_1	Pyrodigal	CDS	783058	783813	.	+	0	ID=GCA000010485_00758;Name=malonyl-ACP O-methyltransferase BioC;locus_tag=GCA000010485_00758;product=malonyl-ACP O-methyltransferase BioC;Dbxref=GO:0008168,GO:0008757,GO:0009102,GO:0010340,GO:0032259,GO:0102130;gene=bioC;Parent=GCA000010485_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000246772.1,SO:0001217,UniParc:UPI00018863B5,UniRef:UniRef100_A0A066T2G2,UniRef:UniRef50_P12999,UniRef:UniRef90_P12999;ec_number=2.1.1.197
contig_1	Pyrodigal	gene	783806	784483	.	+	.	ID=GCA000010485_00759_gene;locus_tag=GCA000010485_00759;gene=bioD
contig_1	Pyrodigal	CDS	783806	784483	.	+	0	ID=GCA000010485_00759;Name=dethiobiotin synthase;locus_tag=GCA000010485_00759;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0005829,GO:0009102,GO:0042803;gene=bioD;Parent=GCA000010485_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_000030923.1,SO:0001217,UniParc:UPI0000D50754,UniRef:UniRef100_A0A061YLR0,UniRef:UniRef50_P13000,UniRef:UniRef90_P13000;ec_number=6.3.3.3
contig_1	Pyrodigal	gene	785062	787083	.	+	.	ID=GCA000010485_00760_gene;locus_tag=GCA000010485_00760;gene=uvrB
contig_1	Pyrodigal	CDS	785062	787083	.	+	0	ID=GCA000010485_00760;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000010485_00760;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0004386,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrB;Parent=GCA000010485_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,RefSeq:WP_000042533.1,SO:0001217,UniParc:UPI00001653D8,UniRef:UniRef100_P0A8F8,UniRef:UniRef50_P0A8F8,UniRef:UniRef90_P0A8F8
contig_1	Pyrodigal	gene	787121	788029	.	-	.	ID=GCA000010485_00761_gene;locus_tag=GCA000010485_00761;gene=ybhK
contig_1	Pyrodigal	CDS	787121	788029	.	-	0	ID=GCA000010485_00761;Name=Putative gluconeogenesis factor;locus_tag=GCA000010485_00761;product=Putative gluconeogenesis factor;Dbxref=GO:0005737,GO:0008360,GO:0043743;gene=ybhK;Parent=GCA000010485_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0391,COG:GH,RefSeq:WP_001295887.1,SO:0001217,UniParc:UPI0001C22AE0,UniRef:UniRef100_A0A376JDM0,UniRef:UniRef50_P75767,UniRef:UniRef90_P75767
contig_1	Infernal	regulatory_region	788294	788438	5.9e-18	+	.	ID=EFPPCJGBKI_297;Name=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);product=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);Dbxref=RFAM:RF01055;inference=profile:Rfam:RF01055;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	788426	789415	.	+	.	ID=GCA000010485_00762_gene;locus_tag=GCA000010485_00762;gene=moaA
contig_1	Pyrodigal	CDS	788426	789415	.	+	0	ID=GCA000010485_00762;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000010485_00762;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000010485_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2896,COG:H,RefSeq:WP_001295888.1,SO:0001217,UniParc:UPI0001E8B346,UniRef:UniRef100_A0A061KUQ6,UniRef:UniRef50_P30745,UniRef:UniRef90_P30745;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	789437	789949	.	+	.	ID=GCA000010485_00763_gene;locus_tag=GCA000010485_00763;gene=moaB
contig_1	Pyrodigal	CDS	789437	789949	.	+	0	ID=GCA000010485_00763;Name=molybdenum cofactor biosynthesis protein B;locus_tag=GCA000010485_00763;product=molybdenum cofactor biosynthesis protein B;Dbxref=GO:0003824,GO:0005525,GO:0005829,GO:0006777,GO:0034214,GO:0042802;gene=moaB;Parent=GCA000010485_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_000084639.1,SO:0001217,UniParc:UPI00001653D9,UniRef:UniRef100_P0AEZ9,UniRef:UniRef50_P0AEZ9,UniRef:UniRef90_P0AEZ9
contig_1	Pyrodigal	gene	789952	790437	.	+	.	ID=GCA000010485_00764_gene;locus_tag=GCA000010485_00764;gene=moaC
contig_1	Pyrodigal	CDS	789952	790437	.	+	0	ID=GCA000010485_00764;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000010485_00764;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000010485_00764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,RefSeq:WP_000080885.1,SO:0001217,UniParc:UPI0000163986,UniRef:UniRef100_P0A738,UniRef:UniRef50_P0A738,UniRef:UniRef90_P0A738;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	790430	790675	.	+	.	ID=GCA000010485_00765_gene;locus_tag=GCA000010485_00765;gene=moaD
contig_1	Pyrodigal	CDS	790430	790675	.	+	0	ID=GCA000010485_00765;Name=molybdopterin synthase sulfur carrier subunit;locus_tag=GCA000010485_00765;product=molybdopterin synthase sulfur carrier subunit;Dbxref=GO:0000166,GO:0005829,GO:0006777,GO:1990133,GO:1990140;gene=moaD;Parent=GCA000010485_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_000611261.1,SO:0001217,UniParc:UPI00005EFD75,UniRef:UniRef100_A0A067HKG2,UniRef:UniRef50_P30748,UniRef:UniRef90_P30748;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	790677	791129	.	+	.	ID=GCA000010485_00766_gene;locus_tag=GCA000010485_00766;gene=moaE
contig_1	Pyrodigal	CDS	790677	791129	.	+	0	ID=GCA000010485_00766;Name=molybdopterin synthase catalytic subunit MoaE;locus_tag=GCA000010485_00766;product=molybdopterin synthase catalytic subunit MoaE;Dbxref=GO:0005829,GO:0006777,GO:0030366,GO:0042803,GO:1990140;gene=moaE;Parent=GCA000010485_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,RefSeq:WP_000852287.1,SO:0001217,UniParc:UPI00000DE8D1,UniRef:UniRef100_C3THZ2,UniRef:UniRef50_P30749,UniRef:UniRef90_P30749;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	791266	791970	.	+	.	ID=GCA000010485_00767_gene;locus_tag=GCA000010485_00767;gene=ybhL
contig_1	Pyrodigal	CDS	791266	791970	.	+	0	ID=GCA000010485_00767;Name=Inner membrane protein YbhL;locus_tag=GCA000010485_00767;product=Inner membrane protein YbhL;Dbxref=GO:0005262,GO:0005886,GO:0030162;gene=ybhL;Parent=GCA000010485_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000373624.1,SO:0001217,UniParc:UPI000013A358,UniRef:UniRef100_P0AAC4,UniRef:UniRef50_P0AAC4,UniRef:UniRef90_P0AAC4
contig_1	Pyrodigal	gene	792176	792889	.	+	.	ID=GCA000010485_00768_gene;locus_tag=GCA000010485_00768;gene=ybhM
contig_1	Pyrodigal	CDS	792176	792889	.	+	0	ID=GCA000010485_00768;Name=putative protein YbhM;locus_tag=GCA000010485_00768;product=putative protein YbhM;Dbxref=GO:0005886;gene=ybhM;Parent=GCA000010485_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295889.1,SO:0001217,UniParc:UPI0001C228CE,UniRef:UniRef100_A0A066T2H0,UniRef:UniRef50_P75769,UniRef:UniRef90_P75769
contig_1	Pyrodigal	gene	792925	793881	.	-	.	ID=GCA000010485_00769_gene;locus_tag=GCA000010485_00769;gene=ybhN
contig_1	Pyrodigal	CDS	792925	793881	.	-	0	ID=GCA000010485_00769;Name=Inner membrane protein YbhN;locus_tag=GCA000010485_00769;product=Inner membrane protein YbhN;Dbxref=GO:0005886;gene=ybhN;Parent=GCA000010485_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000045462.1,SO:0001217,UniParc:UPI0001C228CF,UniRef:UniRef100_A0A066T6N9,UniRef:UniRef50_P75770,UniRef:UniRef90_P75770
contig_1	Pyrodigal	gene	793881	795122	.	-	.	ID=GCA000010485_00770_gene;locus_tag=GCA000010485_00770;gene=clsB
contig_1	Pyrodigal	CDS	793881	795122	.	-	0	ID=GCA000010485_00770;Name=cardiolipin synthase ClsB;locus_tag=GCA000010485_00770;product=cardiolipin synthase ClsB;Dbxref=GO:0005886,GO:0008808,GO:0032049;gene=clsB;Parent=GCA000010485_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_000650371.1,SO:0001217,UniParc:UPI0001C228D0,UniRef:UniRef100_A0A066T6X3,UniRef:UniRef50_P0AA84,UniRef:UniRef90_P0AA84;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	795119	795880	.	-	.	ID=GCA000010485_00771_gene;locus_tag=GCA000010485_00771;gene=ybhP
contig_1	Pyrodigal	CDS	795119	795880	.	-	0	ID=GCA000010485_00771;Name=putative protein YbhP;locus_tag=GCA000010485_00771;product=putative protein YbhP;Dbxref=GO:0003824,GO:0006506,GO:0016020;gene=ybhP;Parent=GCA000010485_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3568,COG:R,RefSeq:WP_001113355.1,SO:0001217,UniParc:UPI0001C228D1,UniRef:UniRef100_A0A061YKY0,UniRef:UniRef50_P0AAW1,UniRef:UniRef90_P0AAW1
contig_1	Pyrodigal	gene	796013	796423	.	+	.	ID=GCA000010485_00772_gene;locus_tag=GCA000010485_00772;gene=ybhQ
contig_1	Pyrodigal	CDS	796013	796423	.	+	0	ID=GCA000010485_00772;Name=Inner membrane protein YbhQ;locus_tag=GCA000010485_00772;product=Inner membrane protein YbhQ;Dbxref=GO:0005886;gene=ybhQ;Parent=GCA000010485_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000871982.1,SO:0001217,UniParc:UPI000013A35D,UniRef:UniRef100_P0AAW5,UniRef:UniRef50_P0AAW5,UniRef:UniRef90_P0AAW5
contig_1	Pyrodigal	gene	796385	797491	.	-	.	ID=GCA000010485_00773_gene;locus_tag=GCA000010485_00773;gene=ybhR
contig_1	Pyrodigal	CDS	796385	797491	.	-	0	ID=GCA000010485_00773;Name=putative multidrug ABC transporter permease YbhR;locus_tag=GCA000010485_00773;product=putative multidrug ABC transporter permease YbhR;Dbxref=GO:0043190,GO:0140359;gene=ybhR;Parent=GCA000010485_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_000469031.1,SO:0001217,UniParc:UPI000013A35E,UniRef:UniRef100_P0AFP9,UniRef:UniRef50_P0AFP9,UniRef:UniRef90_P0AFP9
contig_1	Pyrodigal	gene	797502	798635	.	-	.	ID=GCA000010485_00774_gene;locus_tag=GCA000010485_00774;gene=ybhS
contig_1	Pyrodigal	CDS	797502	798635	.	-	0	ID=GCA000010485_00774;Name=putative multidrug ABC transporter permease YbhS;locus_tag=GCA000010485_00774;product=putative multidrug ABC transporter permease YbhS;Dbxref=GO:0005886,GO:0006855,GO:0015562,GO:0015904,GO:0035725,GO:0055052,GO:0090452,GO:0140359,GO:1990961;gene=ybhS;Parent=GCA000010485_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_000070116.1,SO:0001217,UniParc:UPI000187BA23,UniRef:UniRef100_A0A066T6P2,UniRef:UniRef50_P0AFQ2,UniRef:UniRef90_P0AFQ2
contig_1	Pyrodigal	gene	798628	800364	.	-	.	ID=GCA000010485_00775_gene;locus_tag=GCA000010485_00775;gene=lptB
contig_1	Pyrodigal	CDS	798628	800364	.	-	0	ID=GCA000010485_00775;Name=LPS export ABC transporter ATP-binding protein;locus_tag=GCA000010485_00775;product=LPS export ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0015221,GO:0015920,GO:0016887,GO:0042626,GO:0043190;gene=lptB;Parent=GCA000010485_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000996111.1,SO:0001217,UniParc:UPI000218584E,UniRef:UniRef100_A0A066T6X7,UniRef:UniRef50_P0A9U1,UniRef:UniRef90_P0A9U1;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	800357	801352	.	-	.	ID=GCA000010485_00776_gene;locus_tag=GCA000010485_00776;gene=hlyD
contig_1	Pyrodigal	CDS	800357	801352	.	-	0	ID=GCA000010485_00776;Name=secretion protein HlyD;locus_tag=GCA000010485_00776;product=secretion protein HlyD;Dbxref=GO:0042597;gene=hlyD;Parent=GCA000010485_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_000743444.1,SO:0001217,UniParc:UPI00005F1477,UniRef:UniRef100_B7ULZ2,UniRef:UniRef50_P75777,UniRef:UniRef90_P75777
contig_1	Pyrodigal	gene	801355	802026	.	-	.	ID=GCA000010485_00777_gene;locus_tag=GCA000010485_00777;gene=cecR
contig_1	Pyrodigal	CDS	801355	802026	.	-	0	ID=GCA000010485_00777;Name=DNA-binding transcriptional regulator CecR;locus_tag=GCA000010485_00777;product=DNA-binding transcriptional regulator CecR;Dbxref=GO:0000976,GO:0003700,GO:0005737;gene=cecR;Parent=GCA000010485_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001296991,COG:COG1309,COG:K,RefSeq:WP_001295890.1,SO:0001217,UniParc:UPI00016A19B5,UniRef:UniRef100_A0A066SYF7,UniRef:UniRef50_P0ACU0,UniRef:UniRef90_P0ACU0
contig_1	Pyrodigal	gene	802255	803616	.	+	.	ID=GCA000010485_00778_gene;locus_tag=GCA000010485_00778;gene=rhlE
contig_1	Pyrodigal	CDS	802255	803616	.	+	0	ID=GCA000010485_00778;Name=ATP-dependent RNA helicase RhlE;locus_tag=GCA000010485_00778;product=ATP-dependent RNA helicase RhlE;Dbxref=GO:0003689,GO:0003723,GO:0003724,GO:0005524,GO:0005829,GO:0009408,GO:0016887,GO:0042255,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=rhlE;Parent=GCA000010485_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_000007091.1,SO:0001217,UniParc:UPI0001C228D3,UniRef:UniRef100_A0A066T2H9,UniRef:UniRef50_P25888,UniRef:UniRef90_P25888;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	803849	804046	.	-	.	ID=GCA000010485_00779_gene;locus_tag=GCA000010485_00779;gene=ybiA
contig_1	Pyrodigal	CDS	803849	804046	.	-	0	ID=GCA000010485_00779;Name=N-glycosidase YbiA;locus_tag=GCA000010485_00779;product=N-glycosidase YbiA;gene=ybiA;Parent=GCA000010485_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000209C68B,UniRef:UniRef100_A0A061KQ65,UniRef:UniRef50_A0A061KQ65,UniRef:UniRef90_A0A061KQ65
contig_1	Pyrodigal	gene	804153	806303	.	+	.	ID=GCA000010485_00780_gene;locus_tag=GCA000010485_00780;gene=dinG
contig_1	Pyrodigal	CDS	804153	806303	.	+	0	ID=GCA000010485_00780;Name=ATP-dependent DNA helicase DinG;locus_tag=GCA000010485_00780;product=ATP-dependent DNA helicase DinG;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006139,GO:0006281,GO:0009378,GO:0009432,GO:0016818,GO:0016853,GO:0016887,GO:0033677,GO:0036121,GO:0043139,GO:0046872,GO:0051539,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=dinG;Parent=GCA000010485_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1199,COG:L,KEGG:K03722,RefSeq:WP_001218644.1,SO:0001217,UniParc:UPI0001C228D5,UniRef:UniRef100_UPI0001C228D5,UniRef:UniRef50_P27296,UniRef:UniRef90_P27296;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	806331	807293	.	+	.	ID=GCA000010485_00781_gene;locus_tag=GCA000010485_00781;gene=ybiB
contig_1	Pyrodigal	CDS	806331	807293	.	+	0	ID=GCA000010485_00781;Name=DNA-binding protein YbiB;locus_tag=GCA000010485_00781;product=DNA-binding protein YbiB;Dbxref=GO:0000162,GO:0003677,GO:0003723,GO:0004048,GO:0005829,GO:0042803;gene=ybiB;Parent=GCA000010485_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,RefSeq:WP_000386550.1,SO:0001217,UniParc:UPI00005EFBC0,UniRef:UniRef100_A0A066SYG1,UniRef:UniRef50_P30177,UniRef:UniRef90_P30177
contig_1	Pyrodigal	gene	807433	808518	.	+	.	ID=GCA000010485_00782_gene;locus_tag=GCA000010485_00782;gene=hcxB
contig_1	Pyrodigal	CDS	807433	808518	.	+	0	ID=GCA000010485_00782;Name=hydroxycarboxylate dehydrogenase HcXB;locus_tag=GCA000010485_00782;product=hydroxycarboxylate dehydrogenase HcXB;Dbxref=GO:0005829,GO:0016491,GO:0047029,GO:0047995;gene=hcxB;Parent=GCA000010485_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000443530,COG:C,COG:COG2055,KEGG:K13574,RefSeq:WP_000443542.1,SO:0001217,UniParc:UPI0001C228D6,UniRef:UniRef100_A0A066T2I4,UniRef:UniRef50_P30178,UniRef:UniRef90_P30178;ec_number=1.1.1.-
contig_1	Bakta	gene	808583	808642	.	+	.	ID=GCA000010485_00783_gene;locus_tag=GCA000010485_00783;inference=ab initio prediction:Bakta;gene=ybiE
contig_1	Bakta	CDS	808583	808642	.	+	0	ID=GCA000010485_00783;Name=Protein YbiE;locus_tag=GCA000010485_00783;product=Protein YbiE;gene=ybiE;Parent=GCA000010485_00783_gene;Note=RefSeq:WP_212734104.1,SO:0001217,UniParc:UPI001BAEBD57,UniRef:UniRef100_A0AAF0NPK2,UniRef:UniRef50_A0AAF0NPK2,UniRef:UniRef90_A0AAF0NPK2
contig_1	Pyrodigal	gene	808656	808916	.	-	.	ID=GCA000010485_00784_gene;locus_tag=GCA000010485_00784;gene=ybiJ
contig_1	Pyrodigal	CDS	808656	808916	.	-	0	ID=GCA000010485_00784;Name=DUF1471 domain-containing protein;locus_tag=GCA000010485_00784;product=DUF1471 domain-containing protein;Dbxref=GO:0042597;gene=ybiJ;Parent=GCA000010485_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849301.1,SO:0001217,UniParc:UPI000013A36C,UniRef:UniRef100_P0AAX3,UniRef:UniRef50_P0AAX3,UniRef:UniRef90_P0AAX3
contig_1	Pyrodigal	gene	809181	809447	.	-	.	ID=GCA000010485_00785_gene;locus_tag=GCA000010485_00785;gene=ybiI
contig_1	Pyrodigal	CDS	809181	809447	.	-	0	ID=GCA000010485_00785;Name=C4-type zinc finger protein YbiI;locus_tag=GCA000010485_00785;product=C4-type zinc finger protein YbiI;Dbxref=GO:0008270,GO:1900378;gene=ybiI;Parent=GCA000010485_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000146343,COG:COG1734,COG:K,RefSeq:WP_000146357.1,SO:0001217,UniParc:UPI00000DE8E1,UniRef:UniRef100_E2QIH0,UniRef:UniRef50_P41039,UniRef:UniRef90_P41039
contig_1	Pyrodigal	gene	809521	810195	.	-	.	ID=GCA000010485_00786_gene;locus_tag=GCA000010485_00786;gene=ybiX
contig_1	Pyrodigal	CDS	809521	810195	.	-	0	ID=GCA000010485_00786;Name=PKHD-type hydroxylase YbiX;locus_tag=GCA000010485_00786;product=PKHD-type hydroxylase YbiX;Dbxref=GO:0005506,GO:0006879,GO:0006974,GO:0016706,GO:0031418;gene=ybiX;Parent=GCA000010485_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3128,COG:R,KEGG:K07336,SO:0001217,UniRef:UniRef50_P75779,UniRef:UniRef90_P75779;ec_number=1.14.11.-
contig_1	Pyrodigal	gene	810240	812522	.	-	.	ID=GCA000010485_00787_gene;locus_tag=GCA000010485_00787;gene=fiu
contig_1	Pyrodigal	CDS	810240	812522	.	-	0	ID=GCA000010485_00787;Name=catecholate siderophore receptor Fiu;locus_tag=GCA000010485_00787;product=catecholate siderophore receptor Fiu;Dbxref=GO:0009279,GO:0015344,GO:0015891,GO:0038023;gene=fiu;Parent=GCA000010485_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16090,RefSeq:WP_000429985.1,SO:0001217,UniParc:UPI0001C228D7,UniRef:UniRef100_A0A061YKX0,UniRef:UniRef50_P75780,UniRef:UniRef90_P75780
contig_1	Pyrodigal	gene	812787	813047	.	-	.	ID=GCA000010485_00788_gene;locus_tag=GCA000010485_00788;gene=mcbA
contig_1	Pyrodigal	CDS	812787	813047	.	-	0	ID=GCA000010485_00788;Name=DUF1471 domain-containing protein;locus_tag=GCA000010485_00788;product=DUF1471 domain-containing protein;Dbxref=GO:0009242,GO:0042597;gene=mcbA;Parent=GCA000010485_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13650,RefSeq:WP_000710618.1,SO:0001217,UniParc:UPI00005EFBC5,UniRef:UniRef100_A0A2G9A0Q9,UniRef:UniRef50_P0AAX6,UniRef:UniRef90_P0AAX6
contig_1	Pyrodigal	gene	813323	814249	.	+	.	ID=GCA000010485_00789_gene;locus_tag=GCA000010485_00789;gene=rlmF
contig_1	Pyrodigal	CDS	813323	814249	.	+	0	ID=GCA000010485_00789;Name=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;locus_tag=GCA000010485_00789;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;Dbxref=GO:0005737,GO:0006364,GO:0008988,GO:0052907,GO:0070475;gene=rlmF;Parent=GCA000010485_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001275941.1,SO:0001217,UniParc:UPI00005EEBAA,UniRef:UniRef100_A7ZJM2,UniRef:UniRef50_P75782,UniRef:UniRef90_Q8X7W6;ec_number=2.1.1.181
contig_1	Pyrodigal	gene	814246	816471	.	-	.	ID=GCA000010485_00790_gene;locus_tag=GCA000010485_00790;gene=ybiO
contig_1	Pyrodigal	CDS	814246	816471	.	-	0	ID=GCA000010485_00790;Name=mechanosensitive channel protein;locus_tag=GCA000010485_00790;product=mechanosensitive channel protein;Dbxref=GO:0005886,GO:0008381,GO:0055085,GO:0071470;gene=ybiO;Parent=GCA000010485_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001267223.1,SO:0001217,UniParc:UPI0001C228D9,UniRef:UniRef100_A0A066T6Y8,UniRef:UniRef50_P75783,UniRef:UniRef90_P75783
contig_1	Pyrodigal	gene	816588	817310	.	-	.	ID=GCA000010485_00791_gene;locus_tag=GCA000010485_00791;gene=glnQ
contig_1	Pyrodigal	CDS	816588	817310	.	-	0	ID=GCA000010485_00791;Name=glutamine ABC transporter ATP-binding protein GlnQ;locus_tag=GCA000010485_00791;product=glutamine ABC transporter ATP-binding protein GlnQ;Dbxref=GO:0003333,GO:0005524,GO:0015424;gene=glnQ;Parent=GCA000010485_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_000569080.1,SO:0001217,UniParc:UPI00000D0D8B,UniRef:UniRef100_C3THN2,UniRef:UniRef50_P10346,UniRef:UniRef90_C3THN2;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	817307	817966	.	-	.	ID=GCA000010485_00792_gene;locus_tag=GCA000010485_00792;gene=glnP
contig_1	Pyrodigal	CDS	817307	817966	.	-	0	ID=GCA000010485_00792;Name=glutamine ABC transporter permease GlnP;locus_tag=GCA000010485_00792;product=glutamine ABC transporter permease GlnP;Dbxref=GO:0006865,GO:0016020,GO:0022857,GO:0043190,GO:0055085;gene=glnP;Parent=GCA000010485_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,RefSeq:WP_001159065.1,SO:0001217,UniParc:UPI000012B73F,UniRef:UniRef100_P0AEQ6,UniRef:UniRef50_P0AEQ6,UniRef:UniRef90_P0AEQ6;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	818105	818851	.	-	.	ID=GCA000010485_00793_gene;locus_tag=GCA000010485_00793;gene=glnH
contig_1	Pyrodigal	CDS	818105	818851	.	-	0	ID=GCA000010485_00793;Name=glutamine ABC transporter substrate-binding protein GlnH;locus_tag=GCA000010485_00793;product=glutamine ABC transporter substrate-binding protein GlnH;Dbxref=GO:0006868,GO:0015276,GO:0015599,GO:0016020,GO:0030288,GO:0043190,GO:0055052,GO:0070406,GO:1903803;gene=glnH;Parent=GCA000010485_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000843866.1,SO:0001217,UniParc:UPI000012B73E,UniRef:UniRef100_P0AEQ3,UniRef:UniRef50_P0AEQ3,UniRef:UniRef90_P0AEQ3;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	819255	819758	.	-	.	ID=GCA000010485_00794_gene;locus_tag=GCA000010485_00794;gene=dps
contig_1	Pyrodigal	CDS	819255	819758	.	-	0	ID=GCA000010485_00794;Name=DNA starvation/stationary phase protection protein Dps;locus_tag=GCA000010485_00794;product=DNA starvation/stationary phase protection protein Dps;Dbxref=GO:0003677,GO:0005737,GO:0006879,GO:0008199,GO:0016722,GO:0030261;gene=dps;Parent=GCA000010485_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_000100800.1,SO:0001217,UniParc:UPI0000000912,UniRef:UniRef100_P0ABT2,UniRef:UniRef50_P0ABT2,UniRef:UniRef90_P0ABT2;ec_number=1.16.-.-
contig_1	Pyrodigal	gene	820058	820945	.	-	.	ID=GCA000010485_00795_gene;locus_tag=GCA000010485_00795;gene=rhtA
contig_1	Pyrodigal	CDS	820058	820945	.	-	0	ID=GCA000010485_00795;Name=threonine/homoserine exporter RhtA;locus_tag=GCA000010485_00795;product=threonine/homoserine exporter RhtA;Dbxref=GO:0005886,GO:0015291,GO:0015565,GO:0015826,GO:0042968,GO:0042970;gene=rhtA;Parent=GCA000010485_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11939,RefSeq:WP_001295297.1,SO:0001217,UniParc:UPI000013A368,UniRef:UniRef100_P0AA67,UniRef:UniRef50_P0AA67,UniRef:UniRef90_P0AA67
contig_1	Bakta	gene	821180	821245	.	+	.	ID=GCA000010485_00796_gene;locus_tag=GCA000010485_00796;inference=ab initio prediction:Bakta;gene=yliM
contig_1	Bakta	CDS	821180	821245	.	+	0	ID=GCA000010485_00796;Name=Protein YliM;locus_tag=GCA000010485_00796;product=Protein YliM;gene=yliM;Parent=GCA000010485_00796_gene;Note=RefSeq:WP_120795379.1,SO:0001217,UniParc:UPI000E466551,UniRef:UniRef100_P0DPN6,UniRef:UniRef50_P0DPN6,UniRef:UniRef90_P0DPN6
contig_1	Pyrodigal	gene	821298	821813	.	+	.	ID=GCA000010485_00797_gene;locus_tag=GCA000010485_00797
contig_1	Pyrodigal	CDS	821298	821813	.	+	0	ID=GCA000010485_00797;Name=Outer membrane protein X;locus_tag=GCA000010485_00797;product=Outer membrane protein X;Parent=GCA000010485_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295296.1,SO:0001217,UniParc:UPI0000130D20,UniRef:UniRef100_P0A917,UniRef:UniRef90_P0A917
contig_1	Pyrodigal	gene	821862	823445	.	-	.	ID=GCA000010485_00798_gene;locus_tag=GCA000010485_00798;gene=opgE
contig_1	Pyrodigal	CDS	821862	823445	.	-	0	ID=GCA000010485_00798;Name=phosphoethanolamine transferase;locus_tag=GCA000010485_00798;product=phosphoethanolamine transferase;Dbxref=GO:0005886,GO:0009244,GO:0016776,GO:1900727;gene=opgE;Parent=GCA000010485_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001054678,COG:COG2194,COG:M,RefSeq:WP_001054655.1,SO:0001217,UniParc:UPI00000DE8E8,UniRef:UniRef100_A0A061JXE2,UniRef:UniRef50_P75785,UniRef:UniRef90_P75785;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	823717	823845	.	-	.	ID=GCA000010485_00799_gene;locus_tag=GCA000010485_00799;gene=mntS
contig_1	Pyrodigal	CDS	823717	823845	.	-	0	ID=GCA000010485_00799;Name=manganase accumulation protein MntS;locus_tag=GCA000010485_00799;product=manganase accumulation protein MntS;Dbxref=GO:0005737,GO:0030026,GO:0071287;gene=mntS;Parent=GCA000010485_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001001761.1,SO:0001217,UniParc:UPI00000DE8E9,UniRef:UniRef100_P0DKB3,UniRef:UniRef50_P0DKB3,UniRef:UniRef90_P0DKB3
contig_1	Pyrodigal	gene	824031	824498	.	+	.	ID=GCA000010485_00800_gene;locus_tag=GCA000010485_00800;gene=mntR
contig_1	Pyrodigal	CDS	824031	824498	.	+	0	ID=GCA000010485_00800;Name=manganese-binding transcriptional regulator MntR;locus_tag=GCA000010485_00800;product=manganese-binding transcriptional regulator MntR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0030145,GO:0045892,GO:0046914,GO:0046983,GO:2000144;gene=mntR;Parent=GCA000010485_00800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1321,COG:K,RefSeq:WP_000091016.1,SO:0001217,UniParc:UPI000012F2C4,UniRef:UniRef100_P0A9F1,UniRef:UniRef50_P0A9F1,UniRef:UniRef90_P0A9F1
contig_1	Pyrodigal	gene	824495	825613	.	+	.	ID=GCA000010485_00801_gene;locus_tag=GCA000010485_00801;gene=ybiR
contig_1	Pyrodigal	CDS	824495	825613	.	+	0	ID=GCA000010485_00801;Name=Inner membrane protein YbiR;locus_tag=GCA000010485_00801;product=Inner membrane protein YbiR;Dbxref=GO:0005886,GO:0055085;gene=ybiR;Parent=GCA000010485_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000056474.1,SO:0001217,UniParc:UPI0001C228DA,UniRef:UniRef100_A0A7I0KS98,UniRef:UniRef50_P75788,UniRef:UniRef90_P75788
contig_1	Pyrodigal	gene	825671	826591	.	-	.	ID=GCA000010485_00802_gene;locus_tag=GCA000010485_00802;gene=ldtB
contig_1	Pyrodigal	CDS	825671	826591	.	-	0	ID=GCA000010485_00802;Name=L%2CD-transpeptidase;locus_tag=GCA000010485_00802;product=L%2CD-transpeptidase;Dbxref=GO:0008360,GO:0016757,GO:0018104,GO:0030288,GO:0071555,GO:0071972;gene=ldtB;Parent=GCA000010485_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1376,COG:M,RefSeq:WP_001056384.1,SO:0001217,UniParc:UPI000013A373,UniRef:UniRef100_P0AAX8,UniRef:UniRef50_P0AAX8,UniRef:UniRef90_P0AAX8;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	826810	828402	.	+	.	ID=GCA000010485_00803_gene;locus_tag=GCA000010485_00803;gene=ybiT
contig_1	Pyrodigal	CDS	826810	828402	.	+	0	ID=GCA000010485_00803;Name=ABC-F family ATPase;locus_tag=GCA000010485_00803;product=ABC-F family ATPase;Dbxref=GO:0005524,GO:0016887;gene=ybiT;Parent=GCA000010485_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000961458.1,SO:0001217,UniParc:UPI000013A374,UniRef:UniRef100_P0A9U3,UniRef:UniRef50_P0A9U3,UniRef:UniRef90_P0A9U3
contig_1	Pyrodigal	gene	828602	829417	.	-	.	ID=GCA000010485_00804_gene;locus_tag=GCA000010485_00804;gene=ybiV
contig_1	Pyrodigal	CDS	828602	829417	.	-	0	ID=GCA000010485_00804;Name=sugar-phosphatase YbiV;locus_tag=GCA000010485_00804;product=sugar-phosphatase YbiV;gene=ybiV;Parent=GCA000010485_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000114272,KEGG:K07757,RefSeq:WP_000114251.1,SO:0001217,UniParc:UPI00005EFBC8,UniRef:UniRef100_A0A0D6IAU7,UniRef:UniRef50_P75792,UniRef:UniRef90_A0A0D6IAU7;ec_number=3.1.3.23
contig_1	Pyrodigal	gene	829563	831995	.	-	.	ID=GCA000010485_00805_gene;locus_tag=GCA000010485_00805;gene=ybiW
contig_1	Pyrodigal	CDS	829563	831995	.	-	0	ID=GCA000010485_00805;Name=putative dehydratase YbiW;locus_tag=GCA000010485_00805;product=putative dehydratase YbiW;Dbxref=GO:0005829,GO:0016829;gene=ybiW;Parent=GCA000010485_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,RefSeq:WP_000209379.1,SO:0001217,UniParc:UPI0001C228FC,UniRef:UniRef100_A0A7I0L1K2,UniRef:UniRef50_P75793,UniRef:UniRef90_P75793;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	832001	832900	.	-	.	ID=GCA000010485_00806_gene;locus_tag=GCA000010485_00806;gene=ybiY
contig_1	Pyrodigal	CDS	832001	832900	.	-	0	ID=GCA000010485_00806;Name=Putative pyruvate formate-lyase 3-activating enzyme;locus_tag=GCA000010485_00806;product=Putative pyruvate formate-lyase 3-activating enzyme;Dbxref=GO:0005737,GO:0043365,GO:0046872,GO:0051539;gene=ybiY;Parent=GCA000010485_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_001545848.1,SO:0001217,UniParc:UPI0001C228FD,UniRef:UniRef100_A0A7I0L2Q5,UniRef:UniRef50_P75794,UniRef:UniRef90_P75794;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	833031	833693	.	+	.	ID=GCA000010485_00807_gene;locus_tag=GCA000010485_00807;gene=fsa
contig_1	Pyrodigal	CDS	833031	833693	.	+	0	ID=GCA000010485_00807;Name=fructose-6-phosphate aldolase;locus_tag=GCA000010485_00807;product=fructose-6-phosphate aldolase;Dbxref=GO:0005737,GO:0005975,GO:0006000,GO:0016832,GO:0042182,GO:0042802,GO:0097023;gene=fsa;Parent=GCA000010485_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,RefSeq:WP_001317741.1,SO:0001217,UniParc:UPI0001C228FE,UniRef:UniRef100_A0A0J2AYD8,UniRef:UniRef50_P78055,UniRef:UniRef90_P78055;ec_number=4.1.2.-
contig_1	Pyrodigal	gene	833769	834518	.	-	.	ID=GCA000010485_00808_gene;locus_tag=GCA000010485_00808;gene=moeB
contig_1	Pyrodigal	CDS	833769	834518	.	-	0	ID=GCA000010485_00808;Name=molybdopterin-synthase adenylyltransferase MoeB;locus_tag=GCA000010485_00808;product=molybdopterin-synthase adenylyltransferase MoeB;Dbxref=GO:0004792,GO:0005524,GO:0005737,GO:0005829,GO:0006777,GO:0008146,GO:0008641,GO:0016779,GO:0042803,GO:0046872,GO:0061605,GO:1990133;gene=moeB;Parent=GCA000010485_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_000829255.1,SO:0001217,UniParc:UPI0001887253,UniRef:UniRef100_E2QIJ2,UniRef:UniRef50_P12282,UniRef:UniRef90_P12282;ec_number=2.7.7.80
contig_1	Pyrodigal	gene	834518	835753	.	-	.	ID=GCA000010485_00809_gene;locus_tag=GCA000010485_00809;gene=moeA
contig_1	Pyrodigal	CDS	834518	835753	.	-	0	ID=GCA000010485_00809;Name=molybdopterin molybdotransferase MoeA;locus_tag=GCA000010485_00809;product=molybdopterin molybdotransferase MoeA;Dbxref=GO:0005737,GO:0005829,GO:0006777,GO:0032324,GO:0042802,GO:0042803,GO:0046872,GO:0061599;gene=moeA;Parent=GCA000010485_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_014343820,COG:COG0303,COG:H,RefSeq:WP_000394422.1,SO:0001217,UniParc:UPI0001C228FF,UniRef:UniRef100_A0A7I0KTR2,UniRef:UniRef50_P12281,UniRef:UniRef90_P12281;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	835957	836922	.	+	.	ID=GCA000010485_00810_gene;locus_tag=GCA000010485_00810;gene=iaaA
contig_1	Pyrodigal	CDS	835957	836922	.	+	0	ID=GCA000010485_00810;Name=beta-aspartyl-peptidase;locus_tag=GCA000010485_00810;product=beta-aspartyl-peptidase;Dbxref=GO:0004067,GO:0005737,GO:0008798,GO:0016540,GO:0016787;gene=iaaA;Parent=GCA000010485_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1446,COG:E,KEGG:K13051,RefSeq:WP_000513804.1,SO:0001217,UniParc:UPI000187BA4E,UniRef:UniRef100_A0A0G9FRU5,UniRef:UniRef50_P37595,UniRef:UniRef90_P37595;ec_number=3.4.19.5
contig_1	Pyrodigal	gene	836909	838780	.	+	.	ID=GCA000010485_00811_gene;locus_tag=GCA000010485_00811;gene=gsiA
contig_1	Pyrodigal	CDS	836909	838780	.	+	0	ID=GCA000010485_00811;Name=glutathione ABC transporter ATP-binding protein GsiA;locus_tag=GCA000010485_00811;product=glutathione ABC transporter ATP-binding protein GsiA;Dbxref=GO:0000166,GO:0005524,GO:0005886,GO:0006810,GO:0015833,GO:0016887,GO:0055085;gene=gsiA;Parent=GCA000010485_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4172,COG:Q,KEGG:K13892,RefSeq:WP_001295896.1,SO:0001217,UniParc:UPI0001E8C1C8,UniRef:UniRef100_A0A061KS04,UniRef:UniRef50_P75796,UniRef:UniRef90_P75796;ec_number=7.4.2.10
contig_1	Pyrodigal	gene	838800	840338	.	+	.	ID=GCA000010485_00812_gene;locus_tag=GCA000010485_00812;gene=gsiB
contig_1	Pyrodigal	CDS	838800	840338	.	+	0	ID=GCA000010485_00812;Name=glutathione ABC transporter substrate-binding protein GsiB;locus_tag=GCA000010485_00812;product=glutathione ABC transporter substrate-binding protein GsiB;Dbxref=GO:0030288,GO:0034634,GO:0034775,GO:0042938,GO:0043190,GO:1904680;gene=gsiB;Parent=GCA000010485_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000090177.1,SO:0001217,UniParc:UPI0001C22901,UniRef:UniRef100_A0A3L4RPP2,UniRef:UniRef50_P75797,UniRef:UniRef90_P75797;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	840356	841276	.	+	.	ID=GCA000010485_00813_gene;locus_tag=GCA000010485_00813;gene=gsiC
contig_1	Pyrodigal	CDS	840356	841276	.	+	0	ID=GCA000010485_00813;Name=glutathione ABC transporter permease GsiC;locus_tag=GCA000010485_00813;product=glutathione ABC transporter permease GsiC;Dbxref=GO:0005886,GO:0016020,GO:0055085;gene=gsiC;Parent=GCA000010485_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,KEGG:K13890,RefSeq:WP_000936043.1,SO:0001217,UniParc:UPI000013B827,UniRef:UniRef100_P75798,UniRef:UniRef50_P75798,UniRef:UniRef90_P75798;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	841279	842190	.	+	.	ID=GCA000010485_00814_gene;locus_tag=GCA000010485_00814;gene=gsiD
contig_1	Pyrodigal	CDS	841279	842190	.	+	0	ID=GCA000010485_00814;Name=glutathione ABC transporter permease GsiD;locus_tag=GCA000010485_00814;product=glutathione ABC transporter permease GsiD;Dbxref=GO:0005886,GO:0016020,GO:0055085,GO:0071916;gene=gsiD;Parent=GCA000010485_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,KEGG:K13891,RefSeq:WP_001236044.1,SO:0001217,UniParc:UPI00000D0B10,UniRef:UniRef100_Q8X6V6,UniRef:UniRef50_P75799,UniRef:UniRef90_P75799;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	842367	843704	.	+	.	ID=GCA000010485_00815_gene;locus_tag=GCA000010485_00815;gene=pdeI
contig_1	Pyrodigal	CDS	842367	843704	.	+	0	ID=GCA000010485_00815;Name=putative cyclic di-GMP phosphodiesterase PdeI;locus_tag=GCA000010485_00815;product=putative cyclic di-GMP phosphodiesterase PdeI;Dbxref=GO:0005886,GO:0071111;gene=pdeI;Parent=GCA000010485_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26148,RefSeq:WP_001545851.1,SO:0001217,UniParc:UPI0001C22902,UniRef:UniRef100_A0A7A7F953,UniRef:UniRef50_P75800,UniRef:UniRef90_P75800;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	843822	844715	.	+	.	ID=GCA000010485_00816_gene;locus_tag=GCA000010485_00816
contig_1	Pyrodigal	CDS	843822	844715	.	+	0	ID=GCA000010485_00816;Name=Cyclic di-GMP phosphodiesterase;locus_tag=GCA000010485_00816;product=Cyclic di-GMP phosphodiesterase;Parent=GCA000010485_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X1IXP6,UniRef:UniRef90_A0A2X1IXP6
contig_1	Pyrodigal	gene	844723	846051	.	+	.	ID=GCA000010485_00817_gene;locus_tag=GCA000010485_00817;gene=dgcI
contig_1	Pyrodigal	CDS	844723	846051	.	+	0	ID=GCA000010485_00817;Name=putative diguanylate cyclase DgcI;locus_tag=GCA000010485_00817;product=putative diguanylate cyclase DgcI;Dbxref=GO:0005525,GO:0005886,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcI;Parent=GCA000010485_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000086884.1,SO:0001217,UniParc:UPI00000DE8F5,UniRef:UniRef100_E2QIK0,UniRef:UniRef50_P75801,UniRef:UniRef90_P75801;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	846098	847423	.	-	.	ID=GCA000010485_00818_gene;locus_tag=GCA000010485_00818;gene=rimO
contig_1	Pyrodigal	CDS	846098	847423	.	-	0	ID=GCA000010485_00818;Name=30S ribosomal protein S12 methylthiotransferase RimO;locus_tag=GCA000010485_00818;product=30S ribosomal protein S12 methylthiotransferase RimO;Dbxref=GO:0005737,GO:0005829,GO:0006400,GO:0008172,GO:0016740,GO:0016782,GO:0018339,GO:0035599,GO:0046872,GO:0051539,GO:0103039,GO:1904047;gene=rimO;Parent=GCA000010485_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K14441,RefSeq:WP_000049367.1,SO:0001217,UniParc:UPI000013B82C,UniRef:UniRef100_P0AEI4,UniRef:UniRef50_P0AEI4,UniRef:UniRef90_P0AEI4;ec_number=2.8.4.4
contig_1	Pyrodigal	gene	847636	848019	.	+	.	ID=GCA000010485_00819_gene;locus_tag=GCA000010485_00819;gene=bssR
contig_1	Pyrodigal	CDS	847636	848019	.	+	0	ID=GCA000010485_00819;Name=biofilm formation regulator BssR;locus_tag=GCA000010485_00819;product=biofilm formation regulator BssR;Dbxref=GO:0010468,GO:1900190;gene=bssR;Parent=GCA000010485_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19688,RefSeq:WP_000497137.1,SO:0001217,UniParc:UPI000013B82D,UniRef:UniRef100_P0AAY1,UniRef:UniRef50_P0AAY1,UniRef:UniRef90_P0AAY1
contig_1	Pyrodigal	gene	848130	849245	.	+	.	ID=GCA000010485_00820_gene;locus_tag=GCA000010485_00820;gene=yliI
contig_1	Pyrodigal	CDS	848130	849245	.	+	0	ID=GCA000010485_00820;Name=aldose sugar dehydrogenase YliI;locus_tag=GCA000010485_00820;product=aldose sugar dehydrogenase YliI;Dbxref=GO:0005509,GO:0009279,GO:0016901,GO:0030288,GO:0070968;gene=yliI;Parent=GCA000010485_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000555031,RefSeq:WP_000555044.1,SO:0001217,UniParc:UPI0001C22904,UniRef:UniRef100_A0A7I0KSI4,UniRef:UniRef50_P75804,UniRef:UniRef90_P75804;ec_number=1.1.5.-
contig_1	Pyrodigal	gene	849242	849868	.	-	.	ID=GCA000010485_00821_gene;locus_tag=GCA000010485_00821;gene=gstB
contig_1	Pyrodigal	CDS	849242	849868	.	-	0	ID=GCA000010485_00821;Name=glutathione S-transferase GstB;locus_tag=GCA000010485_00821;product=glutathione S-transferase GstB;Dbxref=GO:0004364;gene=gstB;Parent=GCA000010485_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295292,COG:COG0625,COG:O,RefSeq:WP_001545852.1,SO:0001217,UniParc:UPI0001C22905,UniRef:UniRef100_A0A7I0KS92,UniRef:UniRef50_P0ACA7,UniRef:UniRef90_P0ACA7;ec_number=2.5.1.18
contig_1	Pyrodigal	gene	850115	851317	.	+	.	ID=GCA000010485_00822_gene;locus_tag=GCA000010485_00822;gene=dacC
contig_1	Pyrodigal	CDS	850115	851317	.	+	0	ID=GCA000010485_00822;Name=serine-type D-Ala-D-Ala carboxypeptidase;locus_tag=GCA000010485_00822;product=serine-type D-Ala-D-Ala carboxypeptidase;Dbxref=GO:0004180,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0009002,GO:0009252,GO:0009410,GO:0030288,GO:0042803,GO:0071555;gene=dacC;Parent=GCA000010485_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,RefSeq:WP_000195961.1,SO:0001217,UniParc:UPI00000D0B1C,UniRef:UniRef100_C3TH97,UniRef:UniRef50_P08506,UniRef:UniRef90_P08506;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	851364	852122	.	-	.	ID=GCA000010485_00823_gene;locus_tag=GCA000010485_00823;gene=deoR
contig_1	Pyrodigal	CDS	851364	852122	.	-	0	ID=GCA000010485_00823;Name=DNA-binding transcriptional repressor DeoR;locus_tag=GCA000010485_00823;product=DNA-binding transcriptional repressor DeoR;Dbxref=GO:0000987,GO:0003700,GO:0006355,GO:2000143;gene=deoR;Parent=GCA000010485_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K11534,RefSeq:WP_000450121.1,SO:0001217,UniParc:UPI00001291CA,UniRef:UniRef100_P0ACK5,UniRef:UniRef50_P0ACK5,UniRef:UniRef90_P0ACK5
contig_1	Pyrodigal	gene	852180	852776	.	-	.	ID=GCA000010485_00824_gene;locus_tag=GCA000010485_00824;gene=ybjG
contig_1	Pyrodigal	CDS	852180	852776	.	-	0	ID=GCA000010485_00824;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000010485_00824;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0046677,GO:0050380,GO:0071555;gene=ybjG;Parent=GCA000010485_00824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000892317.1,SO:0001217,UniParc:UPI00000DE8F8,UniRef:UniRef100_E2QIK7,UniRef:UniRef50_P75806,UniRef:UniRef90_P75806;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	853061	854293	.	+	.	ID=GCA000010485_00825_gene;locus_tag=GCA000010485_00825;gene=mdfA
contig_1	Pyrodigal	CDS	853061	854293	.	+	0	ID=GCA000010485_00825;Name=multidrug efflux MFS transporter MdfA;locus_tag=GCA000010485_00825;product=multidrug efflux MFS transporter MdfA;Dbxref=GO:0005886,GO:0015385,GO:0046677,GO:1990961;gene=mdfA;Parent=GCA000010485_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_116923934,KEGG:K08160,RefSeq:WP_001545853.1,SO:0001217,UniParc:UPI0001C22906,UniRef:UniRef100_A0A7I0KS97,UniRef:UniRef50_P0AEY8,UniRef:UniRef90_P0AEY8
contig_1	Pyrodigal	gene	854334	854612	.	-	.	ID=GCA000010485_00826_gene;locus_tag=GCA000010485_00826;gene=ybjH
contig_1	Pyrodigal	CDS	854334	854612	.	-	0	ID=GCA000010485_00826;Name=putative protein YbjH;locus_tag=GCA000010485_00826;product=putative protein YbjH;gene=ybjH;Parent=GCA000010485_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000DACD9F,UniRef:UniRef100_P0AAY4,UniRef:UniRef50_P0AAY4,UniRef:UniRef90_P0AAY4
contig_1	Pyrodigal	gene	854704	855519	.	-	.	ID=GCA000010485_00827_gene;locus_tag=GCA000010485_00827;gene=ybjI
contig_1	Pyrodigal	CDS	854704	855519	.	-	0	ID=GCA000010485_00827;Name=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;locus_tag=GCA000010485_00827;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;Dbxref=GO:0000287,GO:0005829,GO:0009231,GO:0016791,GO:0043726;gene=ybjI;Parent=GCA000010485_00827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000023565,KEGG:K20861,RefSeq:WP_001298572.1,SO:0001217,UniParc:UPI00005EFBD6,UniRef:UniRef100_A0A136T2P6,UniRef:UniRef50_P75809,UniRef:UniRef90_P75809;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	855519	856646	.	-	.	ID=GCA000010485_00828_gene;locus_tag=GCA000010485_00828;gene=ybjJ
contig_1	Pyrodigal	CDS	855519	856646	.	-	0	ID=GCA000010485_00828;Name=Inner membrane protein YbjJ;locus_tag=GCA000010485_00828;product=Inner membrane protein YbjJ;Dbxref=GO:0005886,GO:0016020,GO:0022857;gene=ybjJ;Parent=GCA000010485_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0738,COG:G,SO:0001217,UniRef:UniRef50_P75810,UniRef:UniRef90_P75810
contig_1	Pyrodigal	gene	856811	857347	.	+	.	ID=GCA000010485_00829_gene;locus_tag=GCA000010485_00829;gene=rcdA
contig_1	Pyrodigal	CDS	856811	857347	.	+	0	ID=GCA000010485_00829;Name=DNA-binding transcriptional regulator RcdA;locus_tag=GCA000010485_00829;product=DNA-binding transcriptional regulator RcdA;Dbxref=GO:0003677,GO:0003700,GO:0006351,GO:0045893;gene=rcdA;Parent=GCA000010485_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295289,COG:COG3226,COG:K,KEGG:K23778,RefSeq:WP_001295903.1,SO:0001217,UniParc:UPI0000E44EF2,UniRef:UniRef100_A0A061YF96,UniRef:UniRef50_P75811,UniRef:UniRef90_P75811
contig_1	Infernal	gene	857364	857442	.	-	.	ID=GCA000010485_00830_gene;locus_tag=GCA000010485_00830;gene=rybB
contig_1	Infernal	ncRNA	857364	857442	5.7e-19	-	.	ID=GCA000010485_00830;Name=RybB RNA;locus_tag=GCA000010485_00830;gene=rybB;product=RybB RNA;Dbxref=RFAM:RF00110;Parent=GCA000010485_00830_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00110
contig_1	Pyrodigal	gene	857523	859208	.	-	.	ID=GCA000010485_00831_gene;locus_tag=GCA000010485_00831;gene=ybjL
contig_1	Pyrodigal	CDS	857523	859208	.	-	0	ID=GCA000010485_00831;Name=aspartate:alanine antiporter;locus_tag=GCA000010485_00831;product=aspartate:alanine antiporter;Dbxref=GO:0005886,GO:0006813,GO:0008324;gene=ybjL;Parent=GCA000010485_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2985,COG:R,KEGG:K07085,RefSeq:WP_001024876.1,SO:0001217,UniParc:UPI000013A38E,UniRef:UniRef100_P60869,UniRef:UniRef50_P60869,UniRef:UniRef90_P60869
contig_1	Pyrodigal	gene	859478	859855	.	+	.	ID=GCA000010485_00832_gene;locus_tag=GCA000010485_00832;gene=ybjM
contig_1	Pyrodigal	CDS	859478	859855	.	+	0	ID=GCA000010485_00832;Name=Inner membrane protein YbjM;locus_tag=GCA000010485_00832;product=Inner membrane protein YbjM;Dbxref=GO:0005886;gene=ybjM;Parent=GCA000010485_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000681104.1,SO:0001217,UniParc:UPI00000DE928,UniRef:UniRef100_E2QIL4,UniRef:UniRef50_P64439,UniRef:UniRef90_P64439
contig_1	Pyrodigal	gene	859885	860142	.	-	.	ID=GCA000010485_00833_gene;locus_tag=GCA000010485_00833;gene=grxA
contig_1	Pyrodigal	CDS	859885	860142	.	-	0	ID=GCA000010485_00833;Name=glutaredoxin 1;locus_tag=GCA000010485_00833;product=glutaredoxin 1;Dbxref=GO:0000166,GO:0005737,GO:0009055,GO:0009263,GO:0010134,GO:0015035,GO:0015036,GO:0015038,GO:0019153,GO:0019345,GO:0034599,GO:0045454;gene=grxA;Parent=GCA000010485_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001195240,COG:COG0695,COG:O,RefSeq:WP_001195231.1,SO:0001217,UniParc:UPI00000D0B2E,UniRef:UniRef100_C3TH47,UniRef:UniRef50_P68688,UniRef:UniRef90_P68688
contig_1	Pyrodigal	gene	860302	860589	.	+	.	ID=GCA000010485_00834_gene;locus_tag=GCA000010485_00834
contig_1	Pyrodigal	CDS	860302	860589	.	+	0	ID=GCA000010485_00834;Name=DUF1418 domain-containing protein;locus_tag=GCA000010485_00834;product=DUF1418 domain-containing protein;Parent=GCA000010485_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001201575.1,SO:0001217,UniParc:UPI00005EF818,UniRef:UniRef100_A0A067HID9,UniRef:UniRef50_P46119,UniRef:UniRef90_A0A9P2MYH6
contig_1	Pyrodigal	gene	860573	861295	.	+	.	ID=GCA000010485_00835_gene;locus_tag=GCA000010485_00835;gene=nfsA
contig_1	Pyrodigal	CDS	860573	861295	.	+	0	ID=GCA000010485_00835;Name=nitroreductase NfsA;locus_tag=GCA000010485_00835;product=nitroreductase NfsA;Dbxref=GO:0003955,GO:0005829,GO:0010181,GO:0016491,GO:0034567,GO:0042803;gene=nfsA;Parent=GCA000010485_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000189159,BlastRules:WP_012068493,COG:C,COG:COG0778,KEGG:K10678,RefSeq:WP_000189165.1,SO:0001217,UniParc:UPI00005E3087,UniRef:UniRef100_A0A066SYJ9,UniRef:UniRef50_P17117,UniRef:UniRef90_P17117;ec_number=1.5.1.38
contig_1	Pyrodigal	gene	861356	862258	.	+	.	ID=GCA000010485_00836_gene;locus_tag=GCA000010485_00836;gene=rimK
contig_1	Pyrodigal	CDS	861356	862258	.	+	0	ID=GCA000010485_00836;Name=30S ribosomal protein S6--L-glutamate ligase;locus_tag=GCA000010485_00836;product=30S ribosomal protein S6--L-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0006412,GO:0009432,GO:0018169,GO:0036211,GO:0046872;gene=rimK;Parent=GCA000010485_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0189,COG:EHJQ,KEGG:K05844,RefSeq:WP_000684321.1,SO:0001217,UniParc:UPI000011DD2E,UniRef:UniRef100_P0C0U4,UniRef:UniRef50_P0C0U4,UniRef:UniRef90_P0C0U4;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	862346	862822	.	+	.	ID=GCA000010485_00837_gene;locus_tag=GCA000010485_00837;gene=ybjN
contig_1	Pyrodigal	CDS	862346	862822	.	+	0	ID=GCA000010485_00837;Name=putative protein YbjN;locus_tag=GCA000010485_00837;product=putative protein YbjN;Dbxref=GO:0009297,GO:0010212,GO:0030308,GO:1900232,GO:1902201,GO:1902209;gene=ybjN;Parent=GCA000010485_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000203025.1,SO:0001217,UniParc:UPI00000480CD,UniRef:UniRef100_P0AAY6,UniRef:UniRef50_P0AAY6,UniRef:UniRef90_P0AAY6
contig_1	Pyrodigal	gene	863172	864284	.	+	.	ID=GCA000010485_00838_gene;locus_tag=GCA000010485_00838;gene=potF
contig_1	Pyrodigal	CDS	863172	864284	.	+	0	ID=GCA000010485_00838;Name=spermidine/putrescine ABC transporter substrate-binding protein PotF;locus_tag=GCA000010485_00838;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;Dbxref=GO:0015846,GO:0015847,GO:0016020,GO:0019808,GO:0019810,GO:0030288,GO:0042597,GO:0055052;gene=potF;Parent=GCA000010485_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,KEGG:K11073,RefSeq:WP_000126095.1,SO:0001217,UniParc:UPI00005EF81A,UniRef:UniRef100_A0A067HI72,UniRef:UniRef50_P31133,UniRef:UniRef90_P31133;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	864379	865512	.	+	.	ID=GCA000010485_00839_gene;locus_tag=GCA000010485_00839;gene=potG
contig_1	Pyrodigal	CDS	864379	865512	.	+	0	ID=GCA000010485_00839;Name=putrescine ABC transporter ATP-binding subunit PotG;locus_tag=GCA000010485_00839;product=putrescine ABC transporter ATP-binding subunit PotG;Dbxref=GO:0005524,GO:0015417,GO:0015594,GO:0015846,GO:0015847,GO:0016020,GO:0016887,GO:0022857,GO:0043190,GO:0055052,GO:0055085;gene=potG;Parent=GCA000010485_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000996007.1,SO:0001217,UniParc:UPI00000D0B3A,UniRef:UniRef100_C3TH17,UniRef:UniRef50_P31134,UniRef:UniRef90_P31134;ec_number=7.6.2.16
contig_1	Pyrodigal	gene	865522	866466	.	+	.	ID=GCA000010485_00840_gene;locus_tag=GCA000010485_00840;gene=potH
contig_1	Pyrodigal	CDS	865522	866466	.	+	0	ID=GCA000010485_00840;Name=putrescine ABC transporter permease PotH;locus_tag=GCA000010485_00840;product=putrescine ABC transporter permease PotH;Dbxref=GO:0005886,GO:0015847,GO:0016020,GO:0043190,GO:0055052,GO:0055085;gene=potH;Parent=GCA000010485_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,KEGG:K11075,RefSeq:WP_000105413.1,SO:0001217,UniParc:UPI0001C22909,UniRef:UniRef100_A0A061YF90,UniRef:UniRef50_P31135,UniRef:UniRef90_P31135;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	866463	867308	.	+	.	ID=GCA000010485_00841_gene;locus_tag=GCA000010485_00841;gene=potI
contig_1	Pyrodigal	CDS	866463	867308	.	+	0	ID=GCA000010485_00841;Name=putrescine ABC transporter permease PotI;locus_tag=GCA000010485_00841;product=putrescine ABC transporter permease PotI;Dbxref=GO:0005886,GO:0015847,GO:0016020,GO:0043190,GO:0055052,GO:0055085;gene=potI;Parent=GCA000010485_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_001061639.1,SO:0001217,UniParc:UPI000191E6CA,UniRef:UniRef100_E2QIM3,UniRef:UniRef50_P0AFL1,UniRef:UniRef90_P0AFL1;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	867368	867856	.	+	.	ID=GCA000010485_00842_gene;locus_tag=GCA000010485_00842;gene=ybjO
contig_1	Pyrodigal	CDS	867368	867856	.	+	0	ID=GCA000010485_00842;Name=Inner membrane protein YbjO;locus_tag=GCA000010485_00842;product=Inner membrane protein YbjO;Dbxref=GO:0005886;gene=ybjO;Parent=GCA000010485_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000389260.1,SO:0001217,UniParc:UPI000013A391,UniRef:UniRef100_P0AAZ0,UniRef:UniRef50_P0AAZ0,UniRef:UniRef90_P0AAZ0
contig_1	Pyrodigal	gene	867897	869024	.	+	.	ID=GCA000010485_00843_gene;locus_tag=GCA000010485_00843;gene=rlmC
contig_1	Pyrodigal	CDS	867897	869024	.	+	0	ID=GCA000010485_00843;Name=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;locus_tag=GCA000010485_00843;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;Dbxref=GO:0005506,GO:0008649,GO:0016070,GO:0051539,GO:0070041,GO:0070475;gene=rlmC;Parent=GCA000010485_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03212,RefSeq:WP_001149713.1,SO:0001217,UniParc:UPI0001C2293B,UniRef:UniRef100_A0A066T729,UniRef:UniRef50_P75817,UniRef:UniRef90_P75817;ec_number=2.1.1.189
contig_1	Pyrodigal	gene	869053	869784	.	-	.	ID=GCA000010485_00844_gene;locus_tag=GCA000010485_00844;gene=artJ
contig_1	Pyrodigal	CDS	869053	869784	.	-	0	ID=GCA000010485_00844;Name=ABC transporter substrate-binding protein ArtJ;locus_tag=GCA000010485_00844;product=ABC transporter substrate-binding protein ArtJ;Dbxref=GO:0015276,GO:0016020,GO:0016597,GO:0030288,GO:0034618,GO:0042597,GO:0055052,GO:0097638,GO:1903826;gene=artJ;Parent=GCA000010485_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295339,RefSeq:WP_001295905.1,SO:0001217,UniParc:UPI00005E3BDF,UniRef:UniRef100_E2QIM6,UniRef:UniRef50_P30860,UniRef:UniRef90_P30860
contig_1	Pyrodigal	gene	870010	870678	.	-	.	ID=GCA000010485_00845_gene;locus_tag=GCA000010485_00845;gene=artM
contig_1	Pyrodigal	CDS	870010	870678	.	-	0	ID=GCA000010485_00845;Name=arginine ABC transporter permease ArtM;locus_tag=GCA000010485_00845;product=arginine ABC transporter permease ArtM;Dbxref=GO:0006865,GO:0016020,GO:0022857,GO:0043190,GO:0071705;gene=artM;Parent=GCA000010485_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4160,COG:E,KEGG:K09998,RefSeq:WP_000464491.1,SO:0001217,UniParc:UPI00001260C1,UniRef:UniRef100_P0AE30,UniRef:UniRef50_P0AE30,UniRef:UniRef90_P0AE30;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	870678	871394	.	-	.	ID=GCA000010485_00846_gene;locus_tag=GCA000010485_00846;gene=artQ
contig_1	Pyrodigal	CDS	870678	871394	.	-	0	ID=GCA000010485_00846;Name=arginine ABC transporter permease ArtQ;locus_tag=GCA000010485_00846;product=arginine ABC transporter permease ArtQ;Dbxref=GO:0006865,GO:0016020,GO:0022857,GO:0043190,GO:0055085,GO:0071705;gene=artQ;Parent=GCA000010485_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4215,COG:E,KEGG:K09999,RefSeq:WP_001001691.1,SO:0001217,UniParc:UPI00001260C5,UniRef:UniRef100_P0AE34,UniRef:UniRef50_P0AE34,UniRef:UniRef90_P0AE34;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	871401	872132	.	-	.	ID=GCA000010485_00847_gene;locus_tag=GCA000010485_00847;gene=artI
contig_1	Pyrodigal	CDS	871401	872132	.	-	0	ID=GCA000010485_00847;Name=arginine ABC transporter substrate-binding protein ArtI;locus_tag=GCA000010485_00847;product=arginine ABC transporter substrate-binding protein ArtI;Dbxref=GO:0015276,GO:0015424,GO:0016020,GO:0030288,GO:0042597,GO:0043190,GO:0055052,GO:0097638;gene=artI;Parent=GCA000010485_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000756574.1,SO:0001217,UniParc:UPI0001C2293C,UniRef:UniRef100_A0A061KUD7,UniRef:UniRef50_P30859,UniRef:UniRef90_P30859
contig_1	Pyrodigal	gene	872150	872878	.	-	.	ID=GCA000010485_00848_gene;locus_tag=GCA000010485_00848;gene=artP
contig_1	Pyrodigal	CDS	872150	872878	.	-	0	ID=GCA000010485_00848;Name=arginine ABC transporter ATP-binding protein ArtP;locus_tag=GCA000010485_00848;product=arginine ABC transporter ATP-binding protein ArtP;Dbxref=GO:0003333,GO:0005524,GO:0005886,GO:0015424,GO:0015426,GO:0016887,GO:0043190;gene=artP;Parent=GCA000010485_00848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4161,COG:E,RefSeq:WP_000027205.1,SO:0001217,UniParc:UPI00001260C3,UniRef:UniRef100_P0AAF6,UniRef:UniRef50_P0AAF6,UniRef:UniRef90_P0AAF6;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	873096	873611	.	-	.	ID=GCA000010485_00849_gene;locus_tag=GCA000010485_00849;gene=ybjP
contig_1	Pyrodigal	CDS	873096	873611	.	-	0	ID=GCA000010485_00849;Name=lipoprotein;locus_tag=GCA000010485_00849;product=lipoprotein;Dbxref=GO:0005886;gene=ybjP;Parent=GCA000010485_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295906.1,SO:0001217,UniParc:UPI000187BAF8,UniRef:UniRef100_A0A061YA95,UniRef:UniRef50_P75818,UniRef:UniRef90_P75818
contig_1	Pyrodigal	gene	873737	874060	.	+	.	ID=GCA000010485_00850_gene;locus_tag=GCA000010485_00850;gene=ybjQ
contig_1	Pyrodigal	CDS	873737	874060	.	+	0	ID=GCA000010485_00850;Name=UPF0145 protein YbjQ;locus_tag=GCA000010485_00850;product=UPF0145 protein YbjQ;Dbxref=GO:0005886;gene=ybjQ;Parent=GCA000010485_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0393,COG:S,RefSeq:WP_001160737.1,SO:0001217,UniParc:UPI000013A393,UniRef:UniRef100_P0A8C1,UniRef:UniRef50_P0A8C1,UniRef:UniRef90_P0A8C1
contig_1	Pyrodigal	gene	874057	874887	.	+	.	ID=GCA000010485_00851_gene;locus_tag=GCA000010485_00851;gene=amiD
contig_1	Pyrodigal	CDS	874057	874887	.	+	0	ID=GCA000010485_00851;Name=N-acetylmuramoyl-L-alanine amidase AmiD;locus_tag=GCA000010485_00851;product=N-acetylmuramoyl-L-alanine amidase AmiD;Dbxref=GO:0008270,GO:0008745,GO:0009253,GO:0009254,GO:0009279,GO:0009392,GO:0019867,GO:0071555;gene=amiD;Parent=GCA000010485_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001252135,COG:COG3023,COG:M,KEGG:K11066,RefSeq:WP_001255186.1,SO:0001217,UniParc:UPI00000DE930,UniRef:UniRef100_E2QIN3,UniRef:UniRef50_P75820,UniRef:UniRef90_P75820;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	874884	875897	.	-	.	ID=GCA000010485_00852_gene;locus_tag=GCA000010485_00852;gene=ybjS
contig_1	Pyrodigal	CDS	874884	875897	.	-	0	ID=GCA000010485_00852;Name=putative protein YbjS;locus_tag=GCA000010485_00852;product=putative protein YbjS;gene=ybjS;Parent=GCA000010485_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_001305933.1,SO:0001217,UniParc:UPI000187BAFA,UniRef:UniRef100_A0A148HJS2,UniRef:UniRef50_P0DX23,UniRef:UniRef90_P75821
contig_1	Pyrodigal	gene	875996	877426	.	-	.	ID=GCA000010485_00853_gene;locus_tag=GCA000010485_00853;gene=ybjT
contig_1	Pyrodigal	CDS	875996	877426	.	-	0	ID=GCA000010485_00853;Name=Putative NAD(P)-binding protein YbjT;locus_tag=GCA000010485_00853;product=Putative NAD(P)-binding protein YbjT;Dbxref=GO:0005886;gene=ybjT;Parent=GCA000010485_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001136505.1,SO:0001217,UniParc:UPI0001C2293D,UniRef:UniRef100_A0A061KRV0,UniRef:UniRef50_P75822,UniRef:UniRef90_P75822
contig_1	Pyrodigal	gene	877437	878438	.	-	.	ID=GCA000010485_00854_gene;locus_tag=GCA000010485_00854;gene=ltaE
contig_1	Pyrodigal	CDS	877437	878438	.	-	0	ID=GCA000010485_00854;Name=low-specificity L-threonine aldolase;locus_tag=GCA000010485_00854;product=low-specificity L-threonine aldolase;Dbxref=GO:0005829,GO:0006520,GO:0006545,GO:0006567,GO:0008732,GO:0016829,GO:0030170,GO:0042802,GO:0050179;gene=ltaE;Parent=GCA000010485_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2008,COG:E,KEGG:K01620,RefSeq:WP_000566382.1,SO:0001217,UniParc:UPI0001C2293E,UniRef:UniRef100_A0A0C5EHI3,UniRef:UniRef50_P75823,UniRef:UniRef90_P75823;ec_number=4.1.2.48
contig_1	Pyrodigal	gene	878475	880193	.	-	.	ID=GCA000010485_00855_gene;locus_tag=GCA000010485_00855;gene=poxB
contig_1	Pyrodigal	CDS	878475	880193	.	-	0	ID=GCA000010485_00855;Name=ubiquinone-dependent pyruvate dehydrogenase;locus_tag=GCA000010485_00855;product=ubiquinone-dependent pyruvate dehydrogenase;Dbxref=GO:0000287,GO:0005829,GO:0005886,GO:0006090,GO:0008289,GO:0030976,GO:0032991,GO:0042802,GO:0042867,GO:0048039,GO:0050660,GO:0052737;gene=poxB;Parent=GCA000010485_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K00156,RefSeq:WP_000815373.1,SO:0001217,UniParc:UPI0000D50786,UniRef:UniRef100_A0A066SYL5,UniRef:UniRef50_P07003,UniRef:UniRef90_P07003;ec_number=1.2.5.1
contig_1	Pyrodigal	gene	880326	881294	.	-	.	ID=GCA000010485_00856_gene;locus_tag=GCA000010485_00856;gene=hcr
contig_1	Pyrodigal	CDS	880326	881294	.	-	0	ID=GCA000010485_00856;Name=NADH oxidoreductase;locus_tag=GCA000010485_00856;product=NADH oxidoreductase;Dbxref=GO:0016491,GO:0016651,GO:0046872,GO:0050660,GO:0051536,GO:0051537;gene=hcr;Parent=GCA000010485_00856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,KEGG:K11933,RefSeq:WP_000178692.1,SO:0001217,UniParc:UPI0001C2293F,UniRef:UniRef100_A0A066T2P5,UniRef:UniRef50_P75824,UniRef:UniRef90_P75824;ec_number=1.6.-.-
contig_1	Pyrodigal	gene	881306	882958	.	-	.	ID=GCA000010485_00857_gene;locus_tag=GCA000010485_00857;gene=hcp
contig_1	Pyrodigal	CDS	881306	882958	.	-	0	ID=GCA000010485_00857;Name=hydroxylamine reductase;locus_tag=GCA000010485_00857;product=hydroxylamine reductase;Dbxref=GO:0004601,GO:0005737,GO:0016661,GO:0042542,GO:0046872,GO:0050418,GO:0051536,GO:0051537;gene=hcp;Parent=GCA000010485_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1151,KEGG:K05601,RefSeq:WP_000458841.1,SO:0001217,UniParc:UPI0001C22940,UniRef:UniRef100_A0A066T6V5,UniRef:UniRef50_Q6WRT6,UniRef:UniRef90_Q8FJE0;ec_number=1.7.99.1
contig_1	Pyrodigal	gene	883102	884001	.	-	.	ID=GCA000010485_00858_gene;locus_tag=GCA000010485_00858;gene=lysO
contig_1	Pyrodigal	CDS	883102	884001	.	-	0	ID=GCA000010485_00858;Name=L-lysine exporter LysO;locus_tag=GCA000010485_00858;product=L-lysine exporter LysO;Dbxref=GO:0005886,GO:0015661,GO:1903401;gene=lysO;Parent=GCA000010485_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000491142,COG:COG2431,COG:E,RefSeq:WP_000491137.1,SO:0001217,UniParc:UPI0001C22941,UniRef:UniRef100_A0A061KRU3,UniRef:UniRef50_P75826,UniRef:UniRef90_P75826
contig_1	Pyrodigal	gene	884416	885111	.	-	.	ID=GCA000010485_00859_gene;locus_tag=GCA000010485_00859;gene=aqpZ
contig_1	Pyrodigal	CDS	884416	885111	.	-	0	ID=GCA000010485_00859;Name=aquaporin Z;locus_tag=GCA000010485_00859;product=aquaporin Z;Dbxref=GO:0005886,GO:0006833,GO:0015250;gene=aqpZ;Parent=GCA000010485_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0580,COG:G,RefSeq:WP_000488716.1,SO:0001217,UniParc:UPI00000D0B6B,UniRef:UniRef100_Q8X6K6,UniRef:UniRef50_P60844,UniRef:UniRef90_P60844
contig_1	Pyrodigal	gene	885536	887194	.	+	.	ID=GCA000010485_00860_gene;locus_tag=GCA000010485_00860;gene=ybjD
contig_1	Pyrodigal	CDS	885536	887194	.	+	0	ID=GCA000010485_00860;Name=putative protein YbjD;locus_tag=GCA000010485_00860;product=putative protein YbjD;Dbxref=GO:0000731,GO:0005524,GO:0006302;gene=ybjD;Parent=GCA000010485_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3593,COG:L,KEGG:K07459,RefSeq:WP_000599803.1,SO:0001217,UniParc:UPI000187BB00,UniRef:UniRef100_A0A061KP51,UniRef:UniRef50_P75828,UniRef:UniRef90_P75828
contig_1	Pyrodigal	gene	887191	888183	.	-	.	ID=GCA000010485_00861_gene;locus_tag=GCA000010485_00861;gene=ybjX
contig_1	Pyrodigal	CDS	887191	888183	.	-	0	ID=GCA000010485_00861;Name=putative protein YbjX;locus_tag=GCA000010485_00861;product=putative protein YbjX;Dbxref=GO:0006974;gene=ybjX;Parent=GCA000010485_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2990,COG:S,KEGG:K09824,SO:0001217,UniParc:UPI00000DE93B,UniRef:UniRef100_A0A066T746,UniRef:UniRef50_P75829,UniRef:UniRef90_P75829
contig_1	Pyrodigal	gene	888316	889413	.	+	.	ID=GCA000010485_00862_gene;locus_tag=GCA000010485_00862;gene=macA
contig_1	Pyrodigal	CDS	888316	889413	.	+	0	ID=GCA000010485_00862;Name=macrolide transporter subunit MacA;locus_tag=GCA000010485_00862;product=macrolide transporter subunit MacA;Dbxref=GO:0019898,GO:0022857,GO:1990195,GO:1990961;gene=macA;Parent=GCA000010485_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13888,SO:0001217,UniRef:UniRef50_P75830,UniRef:UniRef90_A0A6C9QFD1
contig_1	Pyrodigal	gene	889410	891356	.	+	.	ID=GCA000010485_00863_gene;locus_tag=GCA000010485_00863;gene=macB
contig_1	Pyrodigal	CDS	889410	891356	.	+	0	ID=GCA000010485_00863;Name=macrolide ABC transporter ATP-binding protein/permease MacB;locus_tag=GCA000010485_00863;product=macrolide ABC transporter ATP-binding protein/permease MacB;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0046677,GO:1990195;gene=macB;Parent=GCA000010485_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000188152.1,SO:0001217,UniParc:UPI0001C22942,UniRef:UniRef100_A0A066SYM2,UniRef:UniRef50_P75831,UniRef:UniRef90_P75831;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	891429	891653	.	-	.	ID=GCA000010485_00864_gene;locus_tag=GCA000010485_00864;gene=cspD
contig_1	Pyrodigal	CDS	891429	891653	.	-	0	ID=GCA000010485_00864;Name=cold shock-like protein CspD;locus_tag=GCA000010485_00864;product=cold shock-like protein CspD;Dbxref=GO:0003676,GO:0003697,GO:0003723,GO:0005829,GO:0006355,GO:0008156,GO:0010468,GO:0042594,GO:0042803,GO:0090729;gene=cspD;Parent=GCA000010485_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,RefSeq:WP_000410785.1,SO:0001217,UniParc:UPI0000128582,UniRef:UniRef100_P0A968,UniRef:UniRef50_P0A968,UniRef:UniRef90_P0A968
contig_1	Bakta	gene	891803	891877	.	+	.	ID=GCA000010485_00865_gene;locus_tag=GCA000010485_00865;inference=ab initio prediction:Bakta;gene=yljB
contig_1	Bakta	CDS	891803	891877	.	+	0	ID=GCA000010485_00865;Name=Protein YljB;locus_tag=GCA000010485_00865;product=Protein YljB;gene=yljB;Parent=GCA000010485_00865_gene;Note=RefSeq:WP_001406719.1,SO:0001217,UniParc:UPI0001888297,UniRef:UniRef100_P0DSE8,UniRef:UniRef50_P0DSE8,UniRef:UniRef90_P0DSE8
contig_1	Pyrodigal	gene	891976	892296	.	+	.	ID=GCA000010485_00866_gene;locus_tag=GCA000010485_00866;gene=clpS
contig_1	Pyrodigal	CDS	891976	892296	.	+	0	ID=GCA000010485_00866;Name=ATP-dependent Clp protease adapter ClpS;locus_tag=GCA000010485_00866;product=ATP-dependent Clp protease adapter ClpS;Dbxref=GO:0006508,GO:0030163;gene=clpS;Parent=GCA000010485_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2127,COG:O,RefSeq:WP_000520775.1,SO:0001217,UniParc:UPI0001C22943,UniRef:UniRef100_A0A7I0KTL1,UniRef:UniRef50_P0A8Q6,UniRef:UniRef90_P0A8Q6
contig_1	Pyrodigal	gene	892327	894603	.	+	.	ID=GCA000010485_00867_gene;locus_tag=GCA000010485_00867;gene=clpA
contig_1	Pyrodigal	CDS	892327	894603	.	+	0	ID=GCA000010485_00867;Name=ATP-dependent Clp protease ATP-binding subunit ClpA;locus_tag=GCA000010485_00867;product=ATP-dependent Clp protease ATP-binding subunit ClpA;Dbxref=GO:0004176,GO:0005524,GO:0005737,GO:0005829,GO:0006508,GO:0006515,GO:0006979,GO:0009368,GO:0016887,GO:0034605,GO:0043335;gene=clpA;Parent=GCA000010485_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000934041.1,SO:0001217,UniParc:UPI0000127B09,UniRef:UniRef100_P0ABH9,UniRef:UniRef50_P0ABH9,UniRef:UniRef90_P0ABH9;ec_number=3.4.21.92
contig_1	tRNAscan-SE	gene	894947	895034	.	-	.	ID=GCA000010485_00868_gene;locus_tag=GCA000010485_00868;gene=trnS
contig_1	tRNAscan-SE	tRNA	894947	895034	.	-	.	ID=GCA000010485_00868;Name=tRNA-Ser(gga);locus_tag=GCA000010485_00868;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000010485_00868_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	895288	895506	.	-	.	ID=GCA000010485_00869_gene;locus_tag=GCA000010485_00869;gene=infA
contig_1	Pyrodigal	CDS	895288	895506	.	-	0	ID=GCA000010485_00869;Name=translation initiation factor IF-1;locus_tag=GCA000010485_00869;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000010485_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_001040187.1,SO:0001217,UniParc:UPI000005A08B,UniRef:UniRef100_A8AIJ9,UniRef:UniRef50_Q8EDW6,UniRef:UniRef90_Q8EDW6
contig_1	Pyrodigal	gene	895791	896495	.	-	.	ID=GCA000010485_00870_gene;locus_tag=GCA000010485_00870;gene=aat
contig_1	Pyrodigal	CDS	895791	896495	.	-	0	ID=GCA000010485_00870;Name=leucyl/phenylalanyl-tRNA--protein transferase;locus_tag=GCA000010485_00870;product=leucyl/phenylalanyl-tRNA--protein transferase;Dbxref=GO:0005737,GO:0006508,GO:0008914,GO:0030163;gene=aat;Parent=GCA000010485_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2360,COG:O,RefSeq:WP_001241674.1,SO:0001217,UniParc:UPI0001C22944,UniRef:UniRef100_A0A061YIE7,UniRef:UniRef50_P0A8P1,UniRef:UniRef90_P0A8P1;ec_number=2.3.2.6
contig_1	Pyrodigal	gene	896537	898258	.	-	.	ID=GCA000010485_00871_gene;locus_tag=GCA000010485_00871;gene=cydC
contig_1	Pyrodigal	CDS	896537	898258	.	-	0	ID=GCA000010485_00871;Name=heme ABC transporter ATP-binding protein/permease CydC;locus_tag=GCA000010485_00871;product=heme ABC transporter ATP-binding protein/permease CydC;Dbxref=GO:0005524,GO:0005886,GO:0015439,GO:0016020,GO:0016887,GO:0033228,GO:0034775,GO:0035351,GO:0042626,GO:0043190,GO:0045454,GO:0055051,GO:0140359,GO:1903605;gene=cydC;Parent=GCA000010485_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_001202204.1,SO:0001217,UniParc:UPI0001C22945,UniRef:UniRef100_A0A061YAB1,UniRef:UniRef50_P23886,UniRef:UniRef90_P23886;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	898259	900025	.	-	.	ID=GCA000010485_00872_gene;locus_tag=GCA000010485_00872;gene=cydD
contig_1	Pyrodigal	CDS	898259	900025	.	-	0	ID=GCA000010485_00872;Name=heme ABC transporter permease/ATP-binding protein CydD;locus_tag=GCA000010485_00872;product=heme ABC transporter permease/ATP-binding protein CydD;Dbxref=GO:0005524,GO:0005886,GO:0015439,GO:0016020,GO:0016887,GO:0033228,GO:0034040,GO:0034775,GO:0035351,GO:0043190,GO:0045454,GO:0055051,GO:0055085,GO:0140359,GO:1903605;gene=cydD;Parent=GCA000010485_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_001043561.1,SO:0001217,UniParc:UPI00000DE941,UniRef:UniRef100_E2QJA1,UniRef:UniRef50_P29018,UniRef:UniRef90_P29018;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	900148	901218	.	-	.	ID=GCA000010485_00873_gene;locus_tag=GCA000010485_00873;gene=trxB
contig_1	Pyrodigal	CDS	900148	901218	.	-	0	ID=GCA000010485_00873;Name=thioredoxin-disulfide reductase;locus_tag=GCA000010485_00873;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0019430;gene=trxB;Parent=GCA000010485_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00384,SO:0001217,UniParc:UPI000209C506,UniRef:UniRef100_A0A066T755,UniRef:UniRef50_Q93HX6,UniRef:UniRef90_A0A1Y5BF13;ec_number=1.8.1.9
contig_1	Pyrodigal	gene	901657	902151	.	+	.	ID=GCA000010485_00874_gene;locus_tag=GCA000010485_00874;gene=lrp
contig_1	Pyrodigal	CDS	901657	902151	.	+	0	ID=GCA000010485_00874;Name=leucine-responsive transcriptional regulator Lrp;locus_tag=GCA000010485_00874;product=leucine-responsive transcriptional regulator Lrp;Dbxref=GO:0005829,GO:0006355,GO:0006524,GO:0043201,GO:0043565;gene=lrp;Parent=GCA000010485_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_000228473.1,SO:0001217,UniParc:UPI00001653E1,UniRef:UniRef100_P0ACJ0,UniRef:UniRef50_P0ACJ0,UniRef:UniRef90_P0ACJ0
contig_1	Pyrodigal	gene	902286	906392	.	+	.	ID=GCA000010485_00875_gene;locus_tag=GCA000010485_00875;gene=ftsK
contig_1	Pyrodigal	CDS	902286	906392	.	+	0	ID=GCA000010485_00875;Name=DNA translocase FtsK;locus_tag=GCA000010485_00875;product=DNA translocase FtsK;Dbxref=GO:0003677,GO:0005524;gene=ftsK;Parent=GCA000010485_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001542260,RefSeq:WP_000077084.1,SO:0001217,UniParc:UPI0001C22947,UniRef:UniRef100_A0A7I0L2L3,UniRef:UniRef50_P46889,UniRef:UniRef90_A0A061YIF2
contig_1	Pyrodigal	gene	906551	907162	.	+	.	ID=GCA000010485_00876_gene;locus_tag=GCA000010485_00876;gene=lolA
contig_1	Pyrodigal	CDS	906551	907162	.	+	0	ID=GCA000010485_00876;Name=outer membrane lipoprotein chaperone LolA;locus_tag=GCA000010485_00876;product=outer membrane lipoprotein chaperone LolA;Dbxref=GO:0030288,GO:0042597,GO:0042953,GO:0044874;gene=lolA;Parent=GCA000010485_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2834,COG:M,KEGG:K03634,RefSeq:WP_001295343.1,SO:0001217,UniParc:UPI000012E7AE,UniRef:UniRef100_P61316,UniRef:UniRef50_P61316,UniRef:UniRef90_P61316
contig_1	Pyrodigal	gene	907173	908516	.	+	.	ID=GCA000010485_00877_gene;locus_tag=GCA000010485_00877;gene=rarA
contig_1	Pyrodigal	CDS	907173	908516	.	+	0	ID=GCA000010485_00877;Name=replication-associated recombination protein RarA;locus_tag=GCA000010485_00877;product=replication-associated recombination protein RarA;gene=rarA;Parent=GCA000010485_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000067755,KEGG:K07478,RefSeq:WP_000067797.1,SO:0001217,UniParc:UPI0000D5079B,UniRef:UniRef100_A0A061KP34,UniRef:UniRef50_P0AAZ4,UniRef:UniRef90_A0A061KP34
contig_1	Pyrodigal	gene	908607	909899	.	+	.	ID=GCA000010485_00878_gene;locus_tag=GCA000010485_00878;gene=serS
contig_1	Pyrodigal	CDS	908607	909899	.	+	0	ID=GCA000010485_00878;Name=serine--tRNA ligase;locus_tag=GCA000010485_00878;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260;gene=serS;Parent=GCA000010485_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,KEGG:K01875,RefSeq:WP_000886683.1,SO:0001217,UniParc:UPI000013667C,UniRef:UniRef100_P0A8L1,UniRef:UniRef50_P0A8L1,UniRef:UniRef90_P0A8L1;ec_number=6.1.1.11
contig_1	Infernal	gene	909913	910047	.	-	.	ID=GCA000010485_00879_gene;locus_tag=GCA000010485_00879;gene=STnc130
contig_1	Infernal	ncRNA	909913	910047	4.8e-21	-	.	ID=GCA000010485_00879;Name=Enterobacteria sRNA STnc130;locus_tag=GCA000010485_00879;product=Enterobacteria sRNA STnc130;Dbxref=RFAM:RF02084;Parent=GCA000010485_00879_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02084
contig_1	Pyrodigal	gene	910138	912582	.	+	.	ID=GCA000010485_00880_gene;locus_tag=GCA000010485_00880;gene=dmsA
contig_1	Pyrodigal	CDS	910138	912582	.	+	0	ID=GCA000010485_00880;Name=dimethylsulfoxide reductase subunit A;locus_tag=GCA000010485_00880;product=dimethylsulfoxide reductase subunit A;Dbxref=GO:0005886,GO:0009055,GO:0009061,GO:0009389,GO:0009390,GO:0018907,GO:0019645,GO:0030151,GO:0030288,GO:0043546,GO:0051539;gene=dmsA;Parent=GCA000010485_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_000850306.1,SO:0001217,UniParc:UPI00005EEE7C,UniRef:UniRef100_A0A066SWM9,UniRef:UniRef50_P18775,UniRef:UniRef90_P18775;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	912593	913210	.	+	.	ID=GCA000010485_00881_gene;locus_tag=GCA000010485_00881;gene=ynfG
contig_1	Pyrodigal	CDS	912593	913210	.	+	0	ID=GCA000010485_00881;Name=DMSO/selenate family reductase complex B subunit;locus_tag=GCA000010485_00881;product=DMSO/selenate family reductase complex B subunit;Dbxref=GO:0009061,GO:0046872,GO:0051539,GO:1990204;gene=ynfG;Parent=GCA000010485_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_000213098.1,SO:0001217,UniParc:UPI000016805B,UniRef:UniRef100_P18776,UniRef:UniRef50_P18776,UniRef:UniRef90_P18776;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	913212	914075	.	+	.	ID=GCA000010485_00882_gene;locus_tag=GCA000010485_00882;gene=dmsC
contig_1	Pyrodigal	CDS	913212	914075	.	+	0	ID=GCA000010485_00882;Name=dimethyl sulfoxide reductase anchor subunit DmsC;locus_tag=GCA000010485_00882;product=dimethyl sulfoxide reductase anchor subunit DmsC;Dbxref=GO:0005886,GO:0009061,GO:0009389,GO:0009390,GO:0018907,GO:0019645;gene=dmsC;Parent=GCA000010485_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000534637,RefSeq:WP_000534666.1,SO:0001217,UniParc:UPI0001C22995,UniRef:UniRef100_A0A066T4N4,UniRef:UniRef50_P18777,UniRef:UniRef90_P18777;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	914111	914737	.	-	.	ID=GCA000010485_00883_gene;locus_tag=GCA000010485_00883;gene=ycaC
contig_1	Pyrodigal	CDS	914111	914737	.	-	0	ID=GCA000010485_00883;Name=isochorismate family cysteine hydrolase YcaC;locus_tag=GCA000010485_00883;product=isochorismate family cysteine hydrolase YcaC;Dbxref=GO:0005829,GO:0016020,GO:0016787,GO:0016829,GO:0042802;gene=ycaC;Parent=GCA000010485_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000165876.1,SO:0001217,UniParc:UPI00000D026E,UniRef:UniRef100_C3TGG7,UniRef:UniRef50_P21367,UniRef:UniRef90_P21367;ec_number=4.-.-.-
contig_1	Pyrodigal	gene	915051	916199	.	+	.	ID=GCA000010485_00884_gene;locus_tag=GCA000010485_00884;gene=ycaD
contig_1	Pyrodigal	CDS	915051	916199	.	+	0	ID=GCA000010485_00884;Name=MFS transporter;locus_tag=GCA000010485_00884;product=MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=ycaD;Parent=GCA000010485_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08219,RefSeq:WP_000109283.1,SO:0001217,UniParc:UPI00005EF841,UniRef:UniRef100_Q0TJF2,UniRef:UniRef50_P21503,UniRef:UniRef90_P21503
contig_1	Pyrodigal	gene	916296	917036	.	-	.	ID=GCA000010485_00885_gene;locus_tag=GCA000010485_00885;gene=pflA
contig_1	Pyrodigal	CDS	916296	917036	.	-	0	ID=GCA000010485_00885;Name=pyruvate formate lyase 1-activating protein;locus_tag=GCA000010485_00885;product=pyruvate formate lyase 1-activating protein;Dbxref=GO:0005737,GO:0006006,GO:0043365,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000010485_00885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_000111043.1,SO:0001217,UniParc:UPI00001653E2,UniRef:UniRef100_P0A9N4,UniRef:UniRef50_P0A9N4,UniRef:UniRef90_P0A9N4;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	917228	919510	.	-	.	ID=GCA000010485_00886_gene;locus_tag=GCA000010485_00886;gene=pflB
contig_1	Pyrodigal	CDS	917228	919510	.	-	0	ID=GCA000010485_00886;Name=formate C-acetyltransferase;locus_tag=GCA000010485_00886;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006006,GO:0008861,GO:0016020,GO:0044814;gene=pflB;Parent=GCA000010485_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_001292822.1,SO:0001217,UniParc:UPI00000480DD,UniRef:UniRef100_P09373,UniRef:UniRef50_P09373,UniRef:UniRef90_P09373;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	919565	920422	.	-	.	ID=GCA000010485_00887_gene;locus_tag=GCA000010485_00887;gene=focA
contig_1	Pyrodigal	CDS	919565	920422	.	-	0	ID=GCA000010485_00887;Name=formate transporter FocA;locus_tag=GCA000010485_00887;product=formate transporter FocA;Dbxref=GO:0005886,GO:0010447,GO:0015499,GO:0015724,GO:0019664,GO:0042802;gene=focA;Parent=GCA000010485_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,KEGG:K06212,RefSeq:WP_001295917.1,SO:0001217,UniParc:UPI0001E8CAD3,UniRef:UniRef100_A0A061L9E0,UniRef:UniRef50_P0AC23,UniRef:UniRef90_P0AC23
contig_1	Pyrodigal	gene	920828	922588	.	-	.	ID=GCA000010485_00888_gene;locus_tag=GCA000010485_00888;gene=ycaO
contig_1	Pyrodigal	CDS	920828	922588	.	-	0	ID=GCA000010485_00888;Name=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;locus_tag=GCA000010485_00888;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;Dbxref=GO:0000287,GO:0005829,GO:0047693;gene=ycaO;Parent=GCA000010485_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1944,COG:J,KEGG:K09136,RefSeq:WP_000194832.1,SO:0001217,UniParc:UPI0001C22997,UniRef:UniRef100_A0A061YNJ0,UniRef:UniRef50_P75838,UniRef:UniRef90_P75838
contig_1	Pyrodigal	gene	922718	923410	.	+	.	ID=GCA000010485_00889_gene;locus_tag=GCA000010485_00889;gene=ycaP
contig_1	Pyrodigal	CDS	922718	923410	.	+	0	ID=GCA000010485_00889;Name=UPF0702 transmembrane protein YcaP;locus_tag=GCA000010485_00889;product=UPF0702 transmembrane protein YcaP;Dbxref=GO:0005886;gene=ycaP;Parent=GCA000010485_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2323,COG:S,RefSeq:WP_000642852.1,SO:0001217,UniParc:UPI00000DE94C,UniRef:UniRef100_E2QJB7,UniRef:UniRef50_P75839,UniRef:UniRef90_P75839
contig_1	Pyrodigal	gene	923609	924697	.	+	.	ID=GCA000010485_00890_gene;locus_tag=GCA000010485_00890;gene=serC
contig_1	Pyrodigal	CDS	923609	924697	.	+	0	ID=GCA000010485_00890;Name=3-phosphoserine/phosphohydroxythreonine transaminase;locus_tag=GCA000010485_00890;product=3-phosphoserine/phosphohydroxythreonine transaminase;Dbxref=GO:0003824,GO:0004648,GO:0005737,GO:0006564,GO:0008615,GO:0030170;gene=serC;Parent=GCA000010485_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1932,COG:HE,KEGG:K00831,RefSeq:WP_000057158.1,SO:0001217,UniParc:UPI00000DE94D,UniRef:UniRef100_Q8FJB7,UniRef:UniRef50_P23721,UniRef:UniRef90_P23721;ec_number=2.6.1.52
contig_1	Pyrodigal	gene	924768	926051	.	+	.	ID=GCA000010485_00891_gene;locus_tag=GCA000010485_00891;gene=aroA
contig_1	Pyrodigal	CDS	924768	926051	.	+	0	ID=GCA000010485_00891;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000010485_00891;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000010485_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_000445240.1,SO:0001217,UniParc:UPI0001C22998,UniRef:UniRef100_A0A066T4M3,UniRef:UniRef50_P0A6D3,UniRef:UniRef90_P0A6D3;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	926221	926985	.	+	.	ID=GCA000010485_00892_gene;locus_tag=GCA000010485_00892;gene=ycaL
contig_1	Pyrodigal	CDS	926221	926985	.	+	0	ID=GCA000010485_00892;Name=metallopeptidase YcaL;locus_tag=GCA000010485_00892;product=metallopeptidase YcaL;Dbxref=GO:0004222,GO:0005886,GO:0008237,GO:0016020,GO:0046872,GO:0051603;gene=ycaL;Parent=GCA000010485_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001350496,COG:COG0501,COG:O,KEGG:K07387,RefSeq:WP_001385260.1,SO:0001217,UniParc:UPI0001C22999,UniRef:UniRef100_A0A3K2ZUE6,UniRef:UniRef50_P43674,UniRef:UniRef90_P43674;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	927158	927841	.	+	.	ID=GCA000010485_00893_gene;locus_tag=GCA000010485_00893;gene=cmk
contig_1	Pyrodigal	CDS	927158	927841	.	+	0	ID=GCA000010485_00893;Name=(d)CMP kinase;locus_tag=GCA000010485_00893;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000010485_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,RefSeq:WP_000125016.1,SO:0001217,UniParc:UPI0000110D23,UniRef:UniRef100_P0A6I0,UniRef:UniRef50_P0A6I0,UniRef:UniRef90_P0A6I0;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	927952	929625	.	+	.	ID=GCA000010485_00894_gene;locus_tag=GCA000010485_00894;gene=rpsA
contig_1	Pyrodigal	CDS	927952	929625	.	+	0	ID=GCA000010485_00894;Name=30S ribosomal protein S1;locus_tag=GCA000010485_00894;product=30S ribosomal protein S1;Dbxref=GO:0003723,GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsA;Parent=GCA000010485_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_000140327.1,SO:0001217,UniParc:UPI0000134E23,UniRef:UniRef100_P0AG67,UniRef:UniRef50_P0AG67,UniRef:UniRef90_P0AG67
contig_1	Pyrodigal	gene	929785	930069	.	+	.	ID=GCA000010485_00895_gene;locus_tag=GCA000010485_00895;gene=ihfB
contig_1	Pyrodigal	CDS	929785	930069	.	+	0	ID=GCA000010485_00895;Name=integration host factor subunit beta;locus_tag=GCA000010485_00895;product=integration host factor subunit beta;Dbxref=GO:0003677,GO:0005694,GO:0005829,GO:0006310,GO:0006355,GO:0006417,GO:0030527,GO:0075713;gene=ihfB;Parent=GCA000010485_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_000167336.1,SO:0001217,UniParc:UPI0000111D90,UniRef:UniRef100_P0A6Y1,UniRef:UniRef50_P0A6Y1,UniRef:UniRef90_P0A6Y1
contig_1	Pyrodigal	gene	930275	932539	.	+	.	ID=GCA000010485_00896_gene;locus_tag=GCA000010485_00896;gene=ycaI
contig_1	Pyrodigal	CDS	930275	932539	.	+	0	ID=GCA000010485_00896;Name=ComEC family protein;locus_tag=GCA000010485_00896;product=ComEC family protein;Dbxref=GO:0005886,GO:0016020,GO:0030420;gene=ycaI;Parent=GCA000010485_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2333,COG:U,KEGG:K02238,RefSeq:WP_000705731.1,SO:0001217,UniParc:UPI0001C2299A,UniRef:UniRef100_A0A061YPG1,UniRef:UniRef50_P37443,UniRef:UniRef90_P37443
contig_1	Pyrodigal	gene	932576	934324	.	+	.	ID=GCA000010485_00897_gene;locus_tag=GCA000010485_00897;gene=msbA
contig_1	Pyrodigal	CDS	932576	934324	.	+	0	ID=GCA000010485_00897;Name=lipid A ABC transporter ATP-binding protein/permease MsbA;locus_tag=GCA000010485_00897;product=lipid A ABC transporter ATP-binding protein/permease MsbA;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016020,GO:0016887,GO:0034040,GO:0055085,GO:0140359;gene=msbA;Parent=GCA000010485_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000551259.1,SO:0001217,UniParc:UPI00000DE953,UniRef:UniRef100_Q8FJB1,UniRef:UniRef50_P60752,UniRef:UniRef90_P60752;ec_number=7.5.2.6
contig_1	Pyrodigal	gene	934321	935307	.	+	.	ID=GCA000010485_00898_gene;locus_tag=GCA000010485_00898;gene=lpxK
contig_1	Pyrodigal	CDS	934321	935307	.	+	0	ID=GCA000010485_00898;Name=tetraacyldisaccharide 4'-kinase;locus_tag=GCA000010485_00898;product=tetraacyldisaccharide 4'-kinase;Dbxref=GO:0005524,GO:0005886,GO:0009029,GO:0009244,GO:0009245;gene=lpxK;Parent=GCA000010485_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1663,COG:M,KEGG:K00912,RefSeq:WP_000570547.1,SO:0001217,UniParc:UPI0001C2299B,UniRef:UniRef100_A0A061YK79,UniRef:UniRef50_P27300,UniRef:UniRef90_P27300;ec_number=2.7.1.130
contig_1	Pyrodigal	gene	935344	936576	.	+	.	ID=GCA000010485_00899_gene;locus_tag=GCA000010485_00899;gene=ycaQ
contig_1	Pyrodigal	CDS	935344	936576	.	+	0	ID=GCA000010485_00899;Name=putative protein YcaQ;locus_tag=GCA000010485_00899;product=putative protein YcaQ;Dbxref=GO:0019104,GO:0036297;gene=ycaQ;Parent=GCA000010485_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3214,COG:L,RefSeq:WP_000056492.1,SO:0001217,UniParc:UPI0001C2299C,UniRef:UniRef100_A0A061L0E0,UniRef:UniRef50_P75843,UniRef:UniRef90_P75843
contig_1	Pyrodigal	gene	936628	936810	.	+	.	ID=GCA000010485_00900_gene;locus_tag=GCA000010485_00900;gene=ycaR
contig_1	Pyrodigal	CDS	936628	936810	.	+	0	ID=GCA000010485_00900;Name=protein YcaR;locus_tag=GCA000010485_00900;product=protein YcaR;Dbxref=GO:0005829;gene=ycaR;Parent=GCA000010485_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2835,COG:J,RefSeq:WP_000350057.1,SO:0001217,UniParc:UPI0001C2299D,UniRef:UniRef100_A0A066SNN8,UniRef:UniRef50_P0AAZ7,UniRef:UniRef90_P0AAZ7
contig_1	Pyrodigal	gene	936807	937553	.	+	.	ID=GCA000010485_00901_gene;locus_tag=GCA000010485_00901;gene=kdsB
contig_1	Pyrodigal	CDS	936807	937553	.	+	0	ID=GCA000010485_00901;Name=3-deoxy-manno-octulosonate cytidylyltransferase;locus_tag=GCA000010485_00901;product=3-deoxy-manno-octulosonate cytidylyltransferase;Dbxref=GO:0005829,GO:0008690,GO:0009103,GO:0009244,GO:0033468;gene=kdsB;Parent=GCA000010485_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1212,COG:M,KEGG:K00979,RefSeq:WP_000011610.1,SO:0001217,UniParc:UPI0001C2299E,UniRef:UniRef100_A0A061KWL1,UniRef:UniRef50_P04951,UniRef:UniRef90_P04951;ec_number=2.7.7.38
contig_1	Pyrodigal	gene	937707	938600	.	+	.	ID=GCA000010485_00902_gene;locus_tag=GCA000010485_00902;gene=ycbJ
contig_1	Pyrodigal	CDS	937707	938600	.	+	0	ID=GCA000010485_00902;Name=putative protein YcbJ;locus_tag=GCA000010485_00902;product=putative protein YcbJ;gene=ycbJ;Parent=GCA000010485_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000436917.1,SO:0001217,UniParc:UPI0001C2299F,UniRef:UniRef100_A0A061YGB2,UniRef:UniRef50_P0AB03,UniRef:UniRef90_P0AB03
contig_1	Pyrodigal	gene	938577	939356	.	-	.	ID=GCA000010485_00903_gene;locus_tag=GCA000010485_00903;gene=elyC
contig_1	Pyrodigal	CDS	938577	939356	.	-	0	ID=GCA000010485_00903;Name=envelope biogenesis factor ElyC;locus_tag=GCA000010485_00903;product=envelope biogenesis factor ElyC;Dbxref=GO:0000270,GO:0005886,GO:0006457,GO:0043164,GO:0071555;gene=elyC;Parent=GCA000010485_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_000899600.1,SO:0001217,UniParc:UPI000013A5A1,UniRef:UniRef100_P0AB01,UniRef:UniRef50_P0AB01,UniRef:UniRef90_P0AB01
contig_1	Pyrodigal	gene	939492	940277	.	+	.	ID=GCA000010485_00904_gene;locus_tag=GCA000010485_00904;gene=cmoM
contig_1	Pyrodigal	CDS	939492	940277	.	+	0	ID=GCA000010485_00904;Name=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;locus_tag=GCA000010485_00904;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;Dbxref=GO:0002098,GO:0008168,GO:0030488,GO:0097697;gene=cmoM;Parent=GCA000010485_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2227,COG:H,KEGG:K06219,RefSeq:WP_001295930.1,SO:0001217,UniParc:UPI0001C229A0,UniRef:UniRef100_A0A061L0E3,UniRef:UniRef50_P36566,UniRef:UniRef90_P36566;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	940274	941596	.	+	.	ID=GCA000010485_00905_gene;locus_tag=GCA000010485_00905;gene=mukF
contig_1	Pyrodigal	CDS	940274	941596	.	+	0	ID=GCA000010485_00905;Name=chromosome partition protein MukF;locus_tag=GCA000010485_00905;product=chromosome partition protein MukF;Dbxref=GO:0005509,GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukF;Parent=GCA000010485_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03633,RefSeq:WP_001288856.1,SO:0001217,UniParc:UPI00000DE959,UniRef:UniRef100_B7MHN1,UniRef:UniRef50_P60293,UniRef:UniRef90_Q8XDG2
contig_1	Pyrodigal	gene	941577	942281	.	+	.	ID=GCA000010485_00906_gene;locus_tag=GCA000010485_00906;gene=mukE
contig_1	Pyrodigal	CDS	941577	942281	.	+	0	ID=GCA000010485_00906;Name=chromosome partition protein MukE;locus_tag=GCA000010485_00906;product=chromosome partition protein MukE;Dbxref=GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukE;Parent=GCA000010485_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3095,COG:D,KEGG:K03804,RefSeq:WP_001295931.1,SO:0001217,UniParc:UPI00005EF84C,UniRef:UniRef100_Q8ZQB6,UniRef:UniRef50_P22524,UniRef:UniRef90_P22524
contig_1	Pyrodigal	gene	942281	946741	.	+	.	ID=GCA000010485_00907_gene;locus_tag=GCA000010485_00907;gene=mukB
contig_1	Pyrodigal	CDS	942281	946741	.	+	0	ID=GCA000010485_00907;Name=chromosome partition protein MukB;locus_tag=GCA000010485_00907;product=chromosome partition protein MukB;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukB;Parent=GCA000010485_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3096,COG:D,KEGG:K03632,RefSeq:WP_000572654.1,SO:0001217,UniParc:UPI000191E846,UniRef:UniRef100_A0A2D3Q8C3,UniRef:UniRef50_P22523,UniRef:UniRef90_P22523
contig_1	Pyrodigal	gene	947002	948849	.	+	.	ID=GCA000010485_00908_gene;locus_tag=GCA000010485_00908;gene=ldtD
contig_1	Pyrodigal	CDS	947002	948849	.	+	0	ID=GCA000010485_00908;Name=L%2CD-transpeptidase;locus_tag=GCA000010485_00908;product=L%2CD-transpeptidase;Dbxref=GO:0004180,GO:0006974,GO:0008360,GO:0009252,GO:0016020,GO:0016740,GO:0016757,GO:0016807,GO:0036460,GO:0046677,GO:0071555,GO:0071972;gene=ldtD;Parent=GCA000010485_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2989,COG:M,RefSeq:WP_000925990.1,SO:0001217,UniParc:UPI0001C229C6,UniRef:UniRef100_A0A061YK91,UniRef:UniRef50_P22525,UniRef:UniRef90_P22525;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	949030	949578	.	+	.	ID=GCA000010485_00909_gene;locus_tag=GCA000010485_00909;gene=ycbK
contig_1	Pyrodigal	CDS	949030	949578	.	+	0	ID=GCA000010485_00909;Name=putative protein YcbK;locus_tag=GCA000010485_00909;product=putative protein YcbK;Dbxref=GO:0004175,GO:0009254,GO:0030288;gene=ycbK;Parent=GCA000010485_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3108,COG:S,RefSeq:WP_001295932.1,SO:0001217,UniParc:UPI000013A5A6,UniRef:UniRef100_P0AB06,UniRef:UniRef50_P0AB06,UniRef:UniRef90_P0AB06
contig_1	Pyrodigal	gene	949605	950252	.	+	.	ID=GCA000010485_00910_gene;locus_tag=GCA000010485_00910;gene=gloC
contig_1	Pyrodigal	CDS	949605	950252	.	+	0	ID=GCA000010485_00910;Name=hydroxyacylglutathione hydrolase GloC;locus_tag=GCA000010485_00910;product=hydroxyacylglutathione hydrolase GloC;gene=gloC;Parent=GCA000010485_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001109486,RefSeq:WP_001109456.1,SO:0001217,UniParc:UPI0001C229C7,UniRef:UniRef100_A0A066SNM9,UniRef:UniRef50_P75849,UniRef:UniRef90_A0A0K0H981;ec_number=3.1.2.6
contig_1	Pyrodigal	gene	950302	951492	.	-	.	ID=GCA000010485_00911_gene;locus_tag=GCA000010485_00911;gene=aspC
contig_1	Pyrodigal	CDS	950302	951492	.	-	0	ID=GCA000010485_00911;Name=aspartate transaminase;locus_tag=GCA000010485_00911;product=aspartate transaminase;Dbxref=GO:0004069,GO:0004838,GO:0005829,GO:0030170,GO:0033585,GO:0042802;gene=aspC;Parent=GCA000010485_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000462687,COG:COG1448,COG:E,RefSeq:WP_000462681.1,SO:0001217,UniParc:UPI00005EF84F,UniRef:UniRef100_A0A066SNX8,UniRef:UniRef50_P00509,UniRef:UniRef90_P00509;ec_number=2.6.1.1
contig_1	Pyrodigal	gene	951677	952765	.	-	.	ID=GCA000010485_00912_gene;locus_tag=GCA000010485_00912;gene=ompF
contig_1	Pyrodigal	CDS	951677	952765	.	-	0	ID=GCA000010485_00912;Name=porin OmpF;locus_tag=GCA000010485_00912;product=porin OmpF;Dbxref=GO:0009279,GO:0015288,GO:0034220,GO:0046930;gene=ompF;Parent=GCA000010485_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3203,COG:M,RefSeq:WP_000977908.1,SO:0001217,UniParc:UPI0001B833CC,UniRef:UniRef100_C9E713,UniRef:UniRef50_P02931,UniRef:UniRef90_P02931
contig_1	Pyrodigal	gene	953369	954769	.	-	.	ID=GCA000010485_00913_gene;locus_tag=GCA000010485_00913;gene=asnS
contig_1	Pyrodigal	CDS	953369	954769	.	-	0	ID=GCA000010485_00913;Name=asparagine--tRNA ligase;locus_tag=GCA000010485_00913;product=asparagine--tRNA ligase;Dbxref=GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421;gene=asnS;Parent=GCA000010485_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_000117888.1,SO:0001217,UniParc:UPI0001C229C8,UniRef:UniRef100_A0A066SSJ3,UniRef:UniRef50_P0A8M0,UniRef:UniRef90_P0A8M0;ec_number=6.1.1.22
contig_1	Pyrodigal	gene	954938	956140	.	-	.	ID=GCA000010485_00914_gene;locus_tag=GCA000010485_00914;gene=pncB
contig_1	Pyrodigal	CDS	954938	956140	.	-	0	ID=GCA000010485_00914;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000010485_00914;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004516,GO:0005829,GO:0009435,GO:0034355;gene=pncB;Parent=GCA000010485_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1488,COG:H,RefSeq:WP_001295933.1,SO:0001217,UniParc:UPI0001C229C9,UniRef:UniRef100_A0A061L0F6,UniRef:UniRef50_P18133,UniRef:UniRef90_P18133;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	956406	959018	.	+	.	ID=GCA000010485_00915_gene;locus_tag=GCA000010485_00915;gene=pepN
contig_1	Pyrodigal	CDS	956406	959018	.	+	0	ID=GCA000010485_00915;Name=aminopeptidase N;locus_tag=GCA000010485_00915;product=aminopeptidase N;Dbxref=GO:0004177,GO:0005886,GO:0006508,GO:0008237,GO:0008270,GO:0042802;gene=pepN;Parent=GCA000010485_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0308,COG:E,RefSeq:WP_000193867.1,SO:0001217,UniParc:UPI0001C229CA,UniRef:UniRef100_A0A066SNX2,UniRef:UniRef50_P04825,UniRef:UniRef90_P04825;ec_number=3.4.11.2
contig_1	Pyrodigal	gene	959061	959828	.	-	.	ID=GCA000010485_00916_gene;locus_tag=GCA000010485_00916;gene=ssuB
contig_1	Pyrodigal	CDS	959061	959828	.	-	0	ID=GCA000010485_00916;Name=aliphatic sulfonates ABC transporter ATP-binding protein;locus_tag=GCA000010485_00916;product=aliphatic sulfonates ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0016887;gene=ssuB;Parent=GCA000010485_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001090493.1,SO:0001217,UniParc:UPI0001C229CB,UniRef:UniRef100_A0A061KWM9,UniRef:UniRef50_P0AAI1,UniRef:UniRef90_P0AAI1;ec_number=7.6.2.14
contig_1	Pyrodigal	gene	959825	960619	.	-	.	ID=GCA000010485_00917_gene;locus_tag=GCA000010485_00917;gene=ssuC
contig_1	Pyrodigal	CDS	959825	960619	.	-	0	ID=GCA000010485_00917;Name=aliphatic sulfonate ABC transporter permease SsuC;locus_tag=GCA000010485_00917;product=aliphatic sulfonate ABC transporter permease SsuC;Dbxref=GO:0005886,GO:0006790,GO:0010438,GO:0016020,GO:0042918,GO:0042959,GO:0055052,GO:0055085;gene=ssuC;Parent=GCA000010485_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,SO:0001217,UniParc:UPI0001C229CC,UniRef:UniRef100_A0A061KYJ9,UniRef:UniRef50_P75851,UniRef:UniRef90_P75851;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	960628	961773	.	-	.	ID=GCA000010485_00918_gene;locus_tag=GCA000010485_00918;gene=ssuD
contig_1	Pyrodigal	CDS	960628	961773	.	-	0	ID=GCA000010485_00918;Name=FMNH2-dependent alkanesulfonate monooxygenase;locus_tag=GCA000010485_00918;product=FMNH2-dependent alkanesulfonate monooxygenase;Dbxref=GO:0006790,GO:0008726,GO:0010181,GO:0046306;gene=ssuD;Parent=GCA000010485_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,KEGG:K04091,RefSeq:WP_000055987.1,SO:0001217,UniParc:UPI0001C229CD,UniRef:UniRef100_A0A061YKA1,UniRef:UniRef50_P80645,UniRef:UniRef90_P80645;ec_number=1.14.14.5
contig_1	Pyrodigal	gene	961770	962729	.	-	.	ID=GCA000010485_00919_gene;locus_tag=GCA000010485_00919;gene=ssuA
contig_1	Pyrodigal	CDS	961770	962729	.	-	0	ID=GCA000010485_00919;Name=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;locus_tag=GCA000010485_00919;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;gene=ssuA;Parent=GCA000010485_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001244308,RefSeq:WP_001226266.1,SO:0001217,UniParc:UPI00021859BE,UniRef:UniRef100_A0A061L0G1,UniRef:UniRef50_P75853,UniRef:UniRef90_Q3Z3I5
contig_1	Pyrodigal	gene	962722	963297	.	-	.	ID=GCA000010485_00920_gene;locus_tag=GCA000010485_00920;gene=ssuE
contig_1	Pyrodigal	CDS	962722	963297	.	-	0	ID=GCA000010485_00920;Name=NADPH-dependent FMN reductase;locus_tag=GCA000010485_00920;product=NADPH-dependent FMN reductase;Dbxref=GO:0006974,GO:0008752,GO:0009970,GO:0042803,GO:0046306,GO:0052873,GO:1990202;gene=ssuE;Parent=GCA000010485_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,RefSeq:WP_001263945.1,SO:0001217,UniParc:UPI0000D507DA,UniRef:UniRef100_E2QJE8,UniRef:UniRef50_P80644,UniRef:UniRef90_P80644;ec_number=1.5.1.38
contig_1	Infernal	regulatory_region	963466	963539	3.8e-18	+	.	ID=EFPPCJGBKI_295;Name=PyrD leader;product=PyrD leader;Dbxref=RFAM:RF02373;inference=profile:Rfam:RF02373;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	963534	964544	.	+	.	ID=GCA000010485_00921_gene;locus_tag=GCA000010485_00921;gene=pyrD
contig_1	Pyrodigal	CDS	963534	964544	.	+	0	ID=GCA000010485_00921;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000010485_00921;product=quinone-dependent dihydroorotate dehydrogenase;Dbxref=GO:0004152,GO:0005737,GO:0005886,GO:0006207,GO:0006222,GO:0016020,GO:0044205,GO:0106430;gene=pyrD;Parent=GCA000010485_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_001295934.1,SO:0001217,UniParc:UPI0000191E6D,UniRef:UniRef100_B7UN24,UniRef:UniRef50_Q8ZG91,UniRef:UniRef90_P25468;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	964718	965260	.	+	.	ID=GCA000010485_00922_gene;locus_tag=GCA000010485_00922;gene=zapC
contig_1	Pyrodigal	CDS	964718	965260	.	+	0	ID=GCA000010485_00922;Name=cell division protein ZapC;locus_tag=GCA000010485_00922;product=cell division protein ZapC;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=zapC;Parent=GCA000010485_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001220671,KEGG:K18657,RefSeq:WP_001295935.1,SO:0001217,UniParc:UPI000188651E,UniRef:UniRef100_E2QJF0,UniRef:UniRef50_P75862,UniRef:UniRef90_Q32HW0
contig_1	Pyrodigal	gene	965257	966366	.	-	.	ID=GCA000010485_00923_gene;locus_tag=GCA000010485_00923;gene=ycbX
contig_1	Pyrodigal	CDS	965257	966366	.	-	0	ID=GCA000010485_00923;Name=6-N-hydroxylaminopurine resistance protein YcbX;locus_tag=GCA000010485_00923;product=6-N-hydroxylaminopurine resistance protein YcbX;Dbxref=GO:0003824,GO:0009407,GO:0009636,GO:0030151,GO:0030170,GO:0051537;gene=ycbX;Parent=GCA000010485_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000212426,COG:COG3217,COG:FV,RefSeq:WP_000224299.1,SO:0001217,UniParc:UPI0001C229CF,UniRef:UniRef100_A0A061YKA7,UniRef:UniRef50_P75863,UniRef:UniRef90_P75863
contig_1	Pyrodigal	gene	966464	968572	.	+	.	ID=GCA000010485_00924_gene;locus_tag=GCA000010485_00924;gene=rlmL
contig_1	Pyrodigal	CDS	966464	968572	.	+	0	ID=GCA000010485_00924;Name=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;locus_tag=GCA000010485_00924;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;Dbxref=GO:0003723,GO:0005737,GO:0008990,GO:0031167,GO:0052915,GO:0070043;gene=rlmL;Parent=GCA000010485_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,KEGG:K12297,RefSeq:WP_001086497.1,SO:0001217,UniParc:UPI0001C229D0,UniRef:UniRef100_A0A061YNS1,UniRef:UniRef50_P75864,UniRef:UniRef90_P75864;ec_number=2.1.1.264
contig_1	Pyrodigal	gene	968584	970491	.	+	.	ID=GCA000010485_00925_gene;locus_tag=GCA000010485_00925;gene=uup
contig_1	Pyrodigal	CDS	968584	970491	.	+	0	ID=GCA000010485_00925;Name=ABC transporter ATP-binding protein;locus_tag=GCA000010485_00925;product=ABC transporter ATP-binding protein;Dbxref=GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0005886,GO:0006301,GO:0009314,GO:0016887,GO:0043022,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=uup;Parent=GCA000010485_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000053085.1,SO:0001217,UniParc:UPI0001C229D1,UniRef:UniRef100_A0A061YMQ1,UniRef:UniRef50_P43672,UniRef:UniRef90_P43672;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	970621	971874	.	+	.	ID=GCA000010485_00926_gene;locus_tag=GCA000010485_00926;gene=pqiA
contig_1	Pyrodigal	CDS	970621	971874	.	+	0	ID=GCA000010485_00926;Name=membrane integrity-associated transporter subunit PqiA;locus_tag=GCA000010485_00926;product=membrane integrity-associated transporter subunit PqiA;Dbxref=GO:0005886;gene=pqiA;Parent=GCA000010485_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2995,COG:M,KEGG:K03808,RefSeq:WP_000333176.1,SO:0001217,UniParc:UPI0000132126,UniRef:UniRef100_P0AFL9,UniRef:UniRef50_P0AFL9,UniRef:UniRef90_P0AFL9
contig_1	Pyrodigal	gene	971879	973519	.	+	.	ID=GCA000010485_00927_gene;locus_tag=GCA000010485_00927;gene=pqiB
contig_1	Pyrodigal	CDS	971879	973519	.	+	0	ID=GCA000010485_00927;Name=intermembrane transport protein PqiB;locus_tag=GCA000010485_00927;product=intermembrane transport protein PqiB;Dbxref=GO:0005886,GO:0030288,GO:0042802,GO:0061024,GO:0120009;gene=pqiB;Parent=GCA000010485_00927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3008,COG:M,KEGG:K06192,RefSeq:WP_000445547.1,SO:0001217,UniParc:UPI000187B8F4,UniRef:UniRef100_A0A061KYK8,UniRef:UniRef50_P43671,UniRef:UniRef90_P43671
contig_1	Pyrodigal	gene	973516	974079	.	+	.	ID=GCA000010485_00928_gene;locus_tag=GCA000010485_00928;gene=pqiC
contig_1	Pyrodigal	CDS	973516	974079	.	+	0	ID=GCA000010485_00928;Name=membrane integrity-associated transporter subunit PqiC;locus_tag=GCA000010485_00928;product=membrane integrity-associated transporter subunit PqiC;gene=pqiC;Parent=GCA000010485_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3009,COG:M,KEGG:K09857,RefSeq:WP_000759108.1,SO:0001217,UniParc:UPI0001C229D2,UniRef:UniRef100_A0A066SSI4,UniRef:UniRef50_H5UX00,UniRef:UniRef90_A0A0H2V5R7
contig_1	Pyrodigal	gene	974335	974502	.	+	.	ID=GCA000010485_00929_gene;locus_tag=GCA000010485_00929;gene=rmf
contig_1	Pyrodigal	CDS	974335	974502	.	+	0	ID=GCA000010485_00929;Name=ribosome modulation factor;locus_tag=GCA000010485_00929;product=ribosome modulation factor;Dbxref=GO:0005737,GO:0019843,GO:0022611,GO:0032055,GO:0033554,GO:0043022,GO:0043024,GO:0141014;gene=rmf;Parent=GCA000010485_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3130,COG:J,KEGG:K03812,RefSeq:WP_000828648.1,SO:0001217,UniParc:UPI00001342F6,UniRef:UniRef100_P0AFW2,UniRef:UniRef50_P0AFW2,UniRef:UniRef90_P0AFW2
contig_1	Pyrodigal	gene	974572	975198	.	-	.	ID=GCA000010485_00930_gene;locus_tag=GCA000010485_00930;gene=fabA
contig_1	Pyrodigal	CDS	974572	975198	.	-	0	ID=GCA000010485_00930;Name=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;locus_tag=GCA000010485_00930;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;Dbxref=GO:0005737,GO:0006633,GO:0006636,GO:0019171,GO:0034017;gene=fabA;Parent=GCA000010485_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K01716,SO:0001217,UniParc:UPI00000DE96C,UniRef:UniRef100_B7UN33,UniRef:UniRef50_P0A6Q3,UniRef:UniRef90_P0A6Q3;ec_number=5.3.3.14
contig_1	Pyrodigal	gene	975159	976919	.	-	.	ID=GCA000010485_00931_gene;locus_tag=GCA000010485_00931;gene=ycbZ
contig_1	Pyrodigal	CDS	975159	976919	.	-	0	ID=GCA000010485_00931;Name=Putative Lon protease-like protein;locus_tag=GCA000010485_00931;product=Putative Lon protease-like protein;Dbxref=GO:0004176,GO:0004252,GO:0005524,GO:0006508,GO:0030163;gene=ycbZ;Parent=GCA000010485_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04770,RefSeq:WP_000156502.1,SO:0001217,UniParc:UPI0001C229D3,UniRef:UniRef100_A0A066SWI3,UniRef:UniRef50_P75867,UniRef:UniRef90_P75867;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	977105	977557	.	+	.	ID=GCA000010485_00932_gene;locus_tag=GCA000010485_00932;gene=matP
contig_1	Pyrodigal	CDS	977105	977557	.	+	0	ID=GCA000010485_00932;Name=macrodomain Ter protein MatP;locus_tag=GCA000010485_00932;product=macrodomain Ter protein MatP;Dbxref=GO:0005737,GO:0006355,GO:0043565,GO:0051301;gene=matP;Parent=GCA000010485_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3120,COG:L,RefSeq:WP_000877153.1,SO:0001217,UniParc:UPI00000DE96E,UniRef:UniRef100_B7UN35,UniRef:UniRef50_P0A8N0,UniRef:UniRef90_P0A8N0
contig_1	Pyrodigal	gene	977633	978685	.	-	.	ID=GCA000010485_00933_gene;locus_tag=GCA000010485_00933;gene=ompA
contig_1	Pyrodigal	CDS	977633	978685	.	-	0	ID=GCA000010485_00933;Name=outer membrane protein A;locus_tag=GCA000010485_00933;product=outer membrane protein A;Dbxref=GO:0009279,GO:0015288,GO:0034220,GO:0046930;gene=ompA;Parent=GCA000010485_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3637,COG:M,RefSeq:WP_001346420.1,SO:0001217,UniParc:UPI0001C229D4,UniRef:UniRef100_A0A061YKB8,UniRef:UniRef50_P0A910,UniRef:UniRef90_A0A2S4N3N0,VFDB:VFC0083,VFDB:VFG001443
contig_1	Pyrodigal	gene	979041	979550	.	-	.	ID=GCA000010485_00934_gene;locus_tag=GCA000010485_00934;gene=sulA
contig_1	Pyrodigal	CDS	979041	979550	.	-	0	ID=GCA000010485_00934;Name=SOS-induced cell division inhibitor SulA;locus_tag=GCA000010485_00934;product=SOS-induced cell division inhibitor SulA;Dbxref=GO:0000917,GO:0005515,GO:0006281,GO:0009432,GO:0051782;gene=sulA;Parent=GCA000010485_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000288707.1,SO:0001217,UniParc:UPI00005EFDB4,UniRef:UniRef100_Q8FJ79,UniRef:UniRef50_A6T752,UniRef:UniRef90_Q8FJ79
contig_1	Pyrodigal	gene	979769	980398	.	+	.	ID=GCA000010485_00935_gene;locus_tag=GCA000010485_00935;gene=sxy
contig_1	Pyrodigal	CDS	979769	980398	.	+	0	ID=GCA000010485_00935;Name=CRP-S regulon transcriptional coactivator Sxy;locus_tag=GCA000010485_00935;product=CRP-S regulon transcriptional coactivator Sxy;Dbxref=GO:0009290,GO:0030420,GO:1903658;gene=sxy;Parent=GCA000010485_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000839153,COG:COG3070,COG:K,RefSeq:WP_000839151.1,SO:0001217,UniParc:UPI000187B8AA,UniRef:UniRef100_A0A066SWI0,UniRef:UniRef50_P75869,UniRef:UniRef90_P75869
contig_1	Pyrodigal	gene	980361	982514	.	-	.	ID=GCA000010485_00936_gene;locus_tag=GCA000010485_00936;gene=yccS
contig_1	Pyrodigal	CDS	980361	982514	.	-	0	ID=GCA000010485_00936;Name=Inner membrane protein YccS;locus_tag=GCA000010485_00936;product=Inner membrane protein YccS;Dbxref=GO:0005886;gene=yccS;Parent=GCA000010485_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_001309395.1,SO:0001217,UniParc:UPI0001886535,UniRef:UniRef100_A0A0J3W3B9,UniRef:UniRef50_P75870,UniRef:UniRef90_P75870
contig_1	Pyrodigal	gene	982533	982979	.	-	.	ID=GCA000010485_00937_gene;locus_tag=GCA000010485_00937;gene=yccF
contig_1	Pyrodigal	CDS	982533	982979	.	-	0	ID=GCA000010485_00937;Name=YccF domain-containing protein;locus_tag=GCA000010485_00937;product=YccF domain-containing protein;Dbxref=GO:0005886;gene=yccF;Parent=GCA000010485_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001261235.1,SO:0001217,UniParc:UPI000013A5C1,UniRef:UniRef100_P0AB12,UniRef:UniRef50_P0AB12,UniRef:UniRef90_P0AB12
contig_1	Pyrodigal	gene	983102	985156	.	+	.	ID=GCA000010485_00938_gene;locus_tag=GCA000010485_00938;gene=helD
contig_1	Pyrodigal	CDS	983102	985156	.	+	0	ID=GCA000010485_00938;Name=DNA helicase IV;locus_tag=GCA000010485_00938;product=DNA helicase IV;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005829,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=helD;Parent=GCA000010485_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,RefSeq:WP_001295938.1,SO:0001217,UniParc:UPI0001C22A09,UniRef:UniRef100_A0A061YKC5,UniRef:UniRef50_P15038,UniRef:UniRef90_P15038;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	985188	985646	.	-	.	ID=GCA000010485_00939_gene;locus_tag=GCA000010485_00939;gene=mgsA
contig_1	Pyrodigal	CDS	985188	985646	.	-	0	ID=GCA000010485_00939;Name=methylglyoxal synthase;locus_tag=GCA000010485_00939;product=methylglyoxal synthase;Dbxref=GO:0005829,GO:0006007,GO:0008929,GO:0019242;gene=mgsA;Parent=GCA000010485_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1803,COG:G,KEGG:K01734,RefSeq:WP_001295939.1,SO:0001217,UniParc:UPI00004E18AA,UniRef:UniRef100_B7UN42,UniRef:UniRef50_P0A731,UniRef:UniRef90_P0A731;ec_number=4.2.3.3
contig_1	Pyrodigal	gene	985742	986404	.	-	.	ID=GCA000010485_00940_gene;locus_tag=GCA000010485_00940;gene=yccT
contig_1	Pyrodigal	CDS	985742	986404	.	-	0	ID=GCA000010485_00940;Name=DUF2057 domain-containing protein;locus_tag=GCA000010485_00940;product=DUF2057 domain-containing protein;Dbxref=GO:0030288;gene=yccT;Parent=GCA000010485_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3110,COG:S,KEGG:K09909,RefSeq:WP_000847791.1,SO:0001217,UniParc:UPI000013A5CA,UniRef:UniRef100_P0A8X4,UniRef:UniRef50_P0A8X4,UniRef:UniRef90_P0A8X4
contig_1	Pyrodigal	gene	986577	986990	.	+	.	ID=GCA000010485_00941_gene;locus_tag=GCA000010485_00941;gene=yccU
contig_1	Pyrodigal	CDS	986577	986990	.	+	0	ID=GCA000010485_00941;Name=putative protein YccU;locus_tag=GCA000010485_00941;product=putative protein YccU;Dbxref=GO:0005829;gene=yccU;Parent=GCA000010485_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1832,COG:R,RefSeq:WP_000665217.1,SO:0001217,UniParc:UPI00000D03B0,UniRef:UniRef100_C3TFK7,UniRef:UniRef50_P75874,UniRef:UniRef90_P75874
contig_1	Pyrodigal	gene	987035	987352	.	-	.	ID=GCA000010485_00942_gene;locus_tag=GCA000010485_00942;gene=hspQ
contig_1	Pyrodigal	CDS	987035	987352	.	-	0	ID=GCA000010485_00942;Name=heat shock protein HspQ;locus_tag=GCA000010485_00942;product=heat shock protein HspQ;Dbxref=GO:0003677,GO:0005737,GO:0009408;gene=hspQ;Parent=GCA000010485_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3785,COG:O,KEGG:K11940,RefSeq:WP_001295356.1,SO:0001217,UniParc:UPI00001B5103,UniRef:UniRef100_P0AB20,UniRef:UniRef50_P0AB20,UniRef:UniRef90_P0AB20
contig_1	Pyrodigal	gene	987410	988585	.	-	.	ID=GCA000010485_00943_gene;locus_tag=GCA000010485_00943;gene=rlmI
contig_1	Pyrodigal	CDS	987410	988585	.	-	0	ID=GCA000010485_00943;Name=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;locus_tag=GCA000010485_00943;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;Dbxref=GO:0003723,GO:0008649;gene=rlmI;Parent=GCA000010485_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,SO:0001217,UniRef:UniRef50_P75876,UniRef:UniRef90_A0A0L0AP63;ec_number=2.1.1.191
contig_1	Pyrodigal	gene	988695	988973	.	+	.	ID=GCA000010485_00944_gene;locus_tag=GCA000010485_00944;gene=yccX
contig_1	Pyrodigal	CDS	988695	988973	.	+	0	ID=GCA000010485_00944;Name=acylphosphatase;locus_tag=GCA000010485_00944;product=acylphosphatase;Dbxref=GO:0003998,GO:0009408;gene=yccX;Parent=GCA000010485_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1254,RefSeq:WP_000048236.1,SO:0001217,UniParc:UPI0001C22A0B,UniRef:UniRef100_A0A066SWH4,UniRef:UniRef50_P0AB65,UniRef:UniRef90_P0AB65;ec_number=3.6.1.7
contig_1	Pyrodigal	gene	988970	989299	.	-	.	ID=GCA000010485_00945_gene;locus_tag=GCA000010485_00945;gene=tusE
contig_1	Pyrodigal	CDS	988970	989299	.	-	0	ID=GCA000010485_00945;Name=sulfurtransferase TusE;locus_tag=GCA000010485_00945;product=sulfurtransferase TusE;Dbxref=GO:0002143,GO:0005737,GO:0016740,GO:0097163;gene=tusE;Parent=GCA000010485_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2920,COG:J,KEGG:K11179,RefSeq:WP_000904443.1,SO:0001217,UniParc:UPI0001885509,UniRef:UniRef100_A0A2X6H7J1,UniRef:UniRef50_P0AB18,UniRef:UniRef90_P0AB18;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	989391	990050	.	-	.	ID=GCA000010485_00946_gene;locus_tag=GCA000010485_00946;gene=yccA
contig_1	Pyrodigal	CDS	989391	990050	.	-	0	ID=GCA000010485_00946;Name=FtsH protease modulator YccA;locus_tag=GCA000010485_00946;product=FtsH protease modulator YccA;Dbxref=GO:0005262,GO:0005886,GO:0016020,GO:0030162,GO:0043066;gene=yccA;Parent=GCA000010485_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_000375136.1,SO:0001217,UniParc:UPI000013A5BC,UniRef:UniRef100_P0AAC6,UniRef:UniRef50_P0AAC6,UniRef:UniRef90_P0AAC6
contig_1	tRNAscan-SE	gene	990259	990346	.	-	.	ID=GCA000010485_00947_gene;locus_tag=GCA000010485_00947;gene=trnS
contig_1	tRNAscan-SE	tRNA	990259	990346	.	-	.	ID=GCA000010485_00947;Name=tRNA-Ser(tga);locus_tag=GCA000010485_00947;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000010485_00947_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	990783	991901	.	+	.	ID=GCA000010485_00948_gene;locus_tag=GCA000010485_00948;gene=hyaA
contig_1	Pyrodigal	CDS	990783	991901	.	+	0	ID=GCA000010485_00948;Name=hydrogenase 1 small subunit;locus_tag=GCA000010485_00948;product=hydrogenase 1 small subunit;Dbxref=GO:0005886,GO:0008901,GO:0009055,GO:0009061,GO:0009375,GO:0033748,GO:0044569,GO:0046872,GO:0051538,GO:0051539;gene=hyaA;Parent=GCA000010485_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058323,COG:C,COG:COG1740,RefSeq:WP_001058323.1,SO:0001217,UniParc:UPI000012ED29,UniRef:UniRef100_P69739,UniRef:UniRef50_P69739,UniRef:UniRef90_P69739;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	991898	993691	.	+	.	ID=GCA000010485_00949_gene;locus_tag=GCA000010485_00949;gene=hyaB
contig_1	Pyrodigal	CDS	991898	993691	.	+	0	ID=GCA000010485_00949;Name=Ni/Fe-hydrogenase large subunit;locus_tag=GCA000010485_00949;product=Ni/Fe-hydrogenase large subunit;Dbxref=GO:0005886,GO:0008901,GO:0016151,GO:0033748;gene=hyaB;Parent=GCA000010485_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0374,RefSeq:WP_000107400.1,SO:0001217,UniParc:UPI0001C22A0D,UniRef:UniRef100_A0A5N3D1J6,UniRef:UniRef50_P0ACD8,UniRef:UniRef90_P0ACD8;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	993710	994417	.	+	.	ID=GCA000010485_00950_gene;locus_tag=GCA000010485_00950;gene=hyaC
contig_1	Pyrodigal	CDS	993710	994417	.	+	0	ID=GCA000010485_00950;Name=Ni/Fe-hydrogenase b-type cytochrome subunit;locus_tag=GCA000010485_00950;product=Ni/Fe-hydrogenase b-type cytochrome subunit;Dbxref=GO:0005506,GO:0005886,GO:0006113,GO:0009055,GO:0009061,GO:0009267,GO:0019645,GO:0020037,GO:0033748,GO:0044569,GO:0098567,GO:1902421;gene=hyaC;Parent=GCA000010485_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1969,RefSeq:WP_001186410.1,SO:0001217,UniParc:UPI00000DE97F,UniRef:UniRef100_A0A2S5RS93,UniRef:UniRef50_P0AAM1,UniRef:UniRef90_P0AAM1;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	994414	995001	.	+	.	ID=GCA000010485_00951_gene;locus_tag=GCA000010485_00951;gene=hyaD
contig_1	Pyrodigal	CDS	994414	995001	.	+	0	ID=GCA000010485_00951;Name=hydrogenase 1 maturation protease;locus_tag=GCA000010485_00951;product=hydrogenase 1 maturation protease;gene=hyaD;Parent=GCA000010485_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03605,RefSeq:WP_000003640.1,SO:0001217,UniParc:UPI0001C22A0E,UniRef:UniRef100_A0A2W0GTI2,UniRef:UniRef50_P19930,UniRef:UniRef90_A0A0D6IDB3;ec_number=3.4.23.-
contig_1	Pyrodigal	gene	994998	995396	.	+	.	ID=GCA000010485_00952_gene;locus_tag=GCA000010485_00952;gene=hyaE
contig_1	Pyrodigal	CDS	994998	995396	.	+	0	ID=GCA000010485_00952;Name=hydrogenase-1 operon protein HyaE;locus_tag=GCA000010485_00952;product=hydrogenase-1 operon protein HyaE;Dbxref=GO:0005048;gene=hyaE;Parent=GCA000010485_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000063960.1,SO:0001217,UniParc:UPI0001C22A0F,UniRef:UniRef100_A0A066SNT7,UniRef:UniRef50_P19931,UniRef:UniRef90_P19931
contig_1	Pyrodigal	gene	995393	996250	.	+	.	ID=GCA000010485_00953_gene;locus_tag=GCA000010485_00953;gene=hyaF
contig_1	Pyrodigal	CDS	995393	996250	.	+	0	ID=GCA000010485_00953;Name=Hydrogenase-1 operon protein HyaF;locus_tag=GCA000010485_00953;product=Hydrogenase-1 operon protein HyaF;gene=hyaF;Parent=GCA000010485_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03618,RefSeq:WP_000004912.1,SO:0001217,UniParc:UPI0001C22A10,UniRef:UniRef100_A0A3K0JWL3,UniRef:UniRef50_P19932,UniRef:UniRef90_P19932
contig_1	Pyrodigal	gene	996384	997928	.	+	.	ID=GCA000010485_00954_gene;locus_tag=GCA000010485_00954;gene=appC
contig_1	Pyrodigal	CDS	996384	997928	.	+	0	ID=GCA000010485_00954;Name=cytochrome bd-II oxidase subunit 1;locus_tag=GCA000010485_00954;product=cytochrome bd-II oxidase subunit 1;Dbxref=GO:0005886,GO:0009055,GO:0009486,GO:0016020,GO:0016682,GO:0019646,GO:0020037,GO:0046872,GO:0070069;gene=appC;Parent=GCA000010485_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_000263563.1,SO:0001217,UniParc:UPI000018F7CB,UniRef:UniRef100_A0A0J3W2A6,UniRef:UniRef50_P26459,UniRef:UniRef90_P26459;ec_number=7.1.1.3
contig_1	Pyrodigal	gene	997940	999076	.	+	.	ID=GCA000010485_00955_gene;locus_tag=GCA000010485_00955;gene=appB
contig_1	Pyrodigal	CDS	997940	999076	.	+	0	ID=GCA000010485_00955;Name=cytochrome d ubiquinol oxidase subunit II;locus_tag=GCA000010485_00955;product=cytochrome d ubiquinol oxidase subunit II;Dbxref=GO:0005886,GO:0009055,GO:0009486,GO:0016682,GO:0019646,GO:0046872,GO:0070069;gene=appB;Parent=GCA000010485_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00426,RefSeq:WP_000460803.1,SO:0001217,UniParc:UPI0000125CB0,UniRef:UniRef100_P26458,UniRef:UniRef50_P26458,UniRef:UniRef90_P26458;ec_number=7.1.1.3
contig_1	Pyrodigal	gene	999089	999181	.	+	.	ID=GCA000010485_00956_gene;locus_tag=GCA000010485_00956;gene=cbdX
contig_1	Pyrodigal	CDS	999089	999181	.	+	0	ID=GCA000010485_00956;Name=cytochrome bd-II oxidase subunit CbdX;locus_tag=GCA000010485_00956;product=cytochrome bd-II oxidase subunit CbdX;Dbxref=GO:0005886,GO:0009279;gene=cbdX;Parent=GCA000010485_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22501,RefSeq:WP_000270305.1,SO:0001217,UniParc:UPI000013A5BE,UniRef:UniRef100_P24244,UniRef:UniRef50_P24244,UniRef:UniRef90_P24244;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	999261	1000571	.	+	.	ID=GCA000010485_00957_gene;locus_tag=GCA000010485_00957;gene=appA
contig_1	Pyrodigal	CDS	999261	1000571	.	+	0	ID=GCA000010485_00957;Name=bifunctional acid phosphatase/4-phytase;locus_tag=GCA000010485_00957;product=bifunctional acid phosphatase/4-phytase;Dbxref=GO:0003993,GO:0008252,GO:0008707,GO:0016036,GO:0030288,GO:0050308,GO:0052745,GO:0071454,GO:1990606;gene=appA;Parent=GCA000010485_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300464,KEGG:K01093,RefSeq:WP_001545877.1,SO:0001217,UniParc:UPI0001C22A11,UniRef:UniRef100_A0A7I0KRX6,UniRef:UniRef50_P07102,UniRef:UniRef90_P07102;ec_number=3.1.3.26
contig_1	Infernal	regulatory_region	1000901	1001323	5e-18	+	.	ID=EFPPCJGBKI_296;Name=cspA thermoregulator;product=cspA thermoregulator;Dbxref=RFAM:RF01766;inference=profile:Rfam:RF01766;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	1001057	1001269	.	+	.	ID=GCA000010485_00958_gene;locus_tag=GCA000010485_00958;gene=cspG
contig_1	Pyrodigal	CDS	1001057	1001269	.	+	0	ID=GCA000010485_00958;Name=cold shock protein CspG;locus_tag=GCA000010485_00958;product=cold shock protein CspG;Dbxref=GO:0003677,GO:0005829;gene=cspG;Parent=GCA000010485_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03704,RefSeq:WP_000066490.1,SO:0001217,UniParc:UPI000012858A,UniRef:UniRef100_P0A978,UniRef:UniRef50_P0A9X9,UniRef:UniRef90_P0A978
contig_1	Pyrodigal	gene	1001663	1001836	.	+	.	ID=GCA000010485_00959_gene;locus_tag=GCA000010485_00959;gene=gnsA
contig_1	Pyrodigal	CDS	1001663	1001836	.	+	0	ID=GCA000010485_00959;Name=Protein GnsA;locus_tag=GCA000010485_00959;product=Protein GnsA;Dbxref=GO:0005829,GO:0042802,GO:0042803;gene=gnsA;Parent=GCA000010485_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001019197.1,SO:0001217,UniParc:UPI000012B8C4,UniRef:UniRef100_P0AC92,UniRef:UniRef50_P0AC92,UniRef:UniRef90_P0AC92
contig_1	Pyrodigal	gene	1001885	1002958	.	-	.	ID=GCA000010485_00960_gene;locus_tag=GCA000010485_00960;gene=yccM
contig_1	Pyrodigal	CDS	1001885	1002958	.	-	0	ID=GCA000010485_00960;Name=Putative electron transport protein YccM;locus_tag=GCA000010485_00960;product=Putative electron transport protein YccM;Dbxref=GO:0005886,GO:0046872,GO:0051539;gene=yccM;Parent=GCA000010485_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000818457.1,SO:0001217,UniParc:UPI0001C22A12,UniRef:UniRef100_A0A7I0KRW4,UniRef:UniRef50_P52636,UniRef:UniRef90_P52636
contig_1	Pyrodigal	gene	1003041	1005728	.	-	.	ID=GCA000010485_00961_gene;locus_tag=GCA000010485_00961;gene=torS
contig_1	Pyrodigal	CDS	1003041	1005728	.	-	0	ID=GCA000010485_00961;Name=TMAO reductase system sensor histidine kinase/response regulator TorS;locus_tag=GCA000010485_00961;product=TMAO reductase system sensor histidine kinase/response regulator TorS;Dbxref=GO:0000155,GO:0000160,GO:0004721,GO:0005524,GO:0005886,GO:0009061,GO:0042802,GO:0042803;gene=torS;Parent=GCA000010485_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P39453,UniRef:UniRef90_P39453;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1005856	1006884	.	+	.	ID=GCA000010485_00962_gene;locus_tag=GCA000010485_00962;gene=torT
contig_1	Pyrodigal	CDS	1005856	1006884	.	+	0	ID=GCA000010485_00962;Name=TMAO reductase system periplasmic protein TorT;locus_tag=GCA000010485_00962;product=TMAO reductase system periplasmic protein TorT;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0009061,GO:0042597;gene=torT;Parent=GCA000010485_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_001264953.1,SO:0001217,UniParc:UPI0000D507EE,UniRef:UniRef100_A0A0D8W703,UniRef:UniRef50_P38683,UniRef:UniRef90_P38683
contig_1	Pyrodigal	gene	1006857	1007549	.	-	.	ID=GCA000010485_00963_gene;locus_tag=GCA000010485_00963;gene=torR
contig_1	Pyrodigal	CDS	1006857	1007549	.	-	0	ID=GCA000010485_00963;Name=two-component system response regulator TorR;locus_tag=GCA000010485_00963;product=two-component system response regulator TorR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=torR;Parent=GCA000010485_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,KEGG:K07772,RefSeq:WP_001120112.1,SO:0001217,UniParc:UPI00000E47B6,UniRef:UniRef100_A0A377E5N1,UniRef:UniRef50_P38684,UniRef:UniRef90_P38684
contig_1	Pyrodigal	gene	1007679	1008851	.	+	.	ID=GCA000010485_00964_gene;locus_tag=GCA000010485_00964;gene=torC
contig_1	Pyrodigal	CDS	1007679	1008851	.	+	0	ID=GCA000010485_00964;Name=pentaheme c-type cytochrome TorC;locus_tag=GCA000010485_00964;product=pentaheme c-type cytochrome TorC;Dbxref=GO:0005506,GO:0005886,GO:0006885,GO:0009055,GO:0009060,GO:0009061,GO:0009276,GO:0009968,GO:0016020,GO:0019645,GO:0020037,GO:0030288,GO:1904852;gene=torC;Parent=GCA000010485_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03532,RefSeq:WP_001230247.1,SO:0001217,UniParc:UPI0000E44F28,UniRef:UniRef100_E2QJN9,UniRef:UniRef50_P33226,UniRef:UniRef90_P33226
contig_1	Pyrodigal	gene	1008851	1011397	.	+	.	ID=GCA000010485_00965_gene;locus_tag=GCA000010485_00965;gene=torA
contig_1	Pyrodigal	CDS	1008851	1011397	.	+	0	ID=GCA000010485_00965;Name=trimethylamine-N-oxide reductase TorA;locus_tag=GCA000010485_00965;product=trimethylamine-N-oxide reductase TorA;Dbxref=GO:0006885,GO:0009055,GO:0009060,GO:0009061,GO:0019645,GO:0030151,GO:0030288,GO:0042597,GO:0043546,GO:0050626,GO:1904852;gene=torA;Parent=GCA000010485_00965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001063148.1,SO:0001217,UniParc:UPI0001C22A14,UniRef:UniRef100_A0A066SSF0,UniRef:UniRef50_P33225,UniRef:UniRef90_P33225;ec_number=1.7.2.3
contig_1	Pyrodigal	gene	1011394	1011993	.	+	.	ID=GCA000010485_00966_gene;locus_tag=GCA000010485_00966;gene=torD
contig_1	Pyrodigal	CDS	1011394	1011993	.	+	0	ID=GCA000010485_00966;Name=molecular chaperone TorD;locus_tag=GCA000010485_00966;product=molecular chaperone TorD;Dbxref=GO:0005737,GO:0006457,GO:0051259;gene=torD;Parent=GCA000010485_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3381,COG:O,RefSeq:WP_000209903.1,SO:0001217,UniParc:UPI0001C22A15,UniRef:UniRef100_A0A061L0L0,UniRef:UniRef50_P36662,UniRef:UniRef90_P36662
contig_1	Infernal	gene	1012005	1012083	.	-	.	ID=GCA000010485_00967_gene;locus_tag=GCA000010485_00967;gene=naRNA4
contig_1	Infernal	ncRNA	1012005	1012083	4e-12	-	.	ID=GCA000010485_00967;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00967;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00967_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	1012106	1012184	.	-	.	ID=GCA000010485_00968_gene;locus_tag=GCA000010485_00968;gene=naRNA4
contig_1	Infernal	ncRNA	1012106	1012184	4.8e-11	-	.	ID=GCA000010485_00968;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_00968;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_00968_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	1012248	1012553	.	-	.	ID=GCA000010485_00969_gene;locus_tag=GCA000010485_00969;gene=cbpM
contig_1	Pyrodigal	CDS	1012248	1012553	.	-	0	ID=GCA000010485_00969;Name=chaperone modulator CbpM;locus_tag=GCA000010485_00969;product=chaperone modulator CbpM;gene=cbpM;Parent=GCA000010485_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000024569.1,SO:0001217,UniParc:UPI00000DE98B,UniRef:UniRef100_B7MIE5,UniRef:UniRef50_A8AI79,UniRef:UniRef90_B7MIE5
contig_1	Pyrodigal	gene	1012553	1013473	.	-	.	ID=GCA000010485_00970_gene;locus_tag=GCA000010485_00970;gene=cbpA
contig_1	Pyrodigal	CDS	1012553	1013473	.	-	0	ID=GCA000010485_00970;Name=curved DNA-binding protein;locus_tag=GCA000010485_00970;product=curved DNA-binding protein;Dbxref=GO:0003681,GO:0005737,GO:0006457,GO:0009295,GO:0042026,GO:0051082,GO:0051085;gene=cbpA;Parent=GCA000010485_00970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_000420625.1,SO:0001217,UniParc:UPI00000DE98C,UniRef:UniRef100_B7UNY3,UniRef:UniRef50_P36659,UniRef:UniRef90_P36659
contig_1	Pyrodigal	gene	1014008	1015249	.	+	.	ID=GCA000010485_00971_gene;locus_tag=GCA000010485_00971;gene=agp
contig_1	Pyrodigal	CDS	1014008	1015249	.	+	0	ID=GCA000010485_00971;Name=bifunctional glucose-1-phosphatase/inositol phosphatase;locus_tag=GCA000010485_00971;product=bifunctional glucose-1-phosphatase/inositol phosphatase;Dbxref=GO:0006007,GO:0008877,GO:0016158,GO:0030288,GO:0050308;gene=agp;Parent=GCA000010485_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01085,RefSeq:WP_001044302.1,SO:0001217,UniParc:UPI0001C22A16,UniRef:UniRef100_A0A066SWF7,UniRef:UniRef50_P19926,UniRef:UniRef90_P19926;ec_number=3.1.3.8
contig_1	Pyrodigal	gene	1015287	1015514	.	-	.	ID=GCA000010485_00972_gene;locus_tag=GCA000010485_00972;gene=yccJ
contig_1	Pyrodigal	CDS	1015287	1015514	.	-	0	ID=GCA000010485_00972;Name=putative protein YccJ;locus_tag=GCA000010485_00972;product=putative protein YccJ;Dbxref=GO:0005829;gene=yccJ;Parent=GCA000010485_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001143120.1,SO:0001217,UniParc:UPI000013A5C2,UniRef:UniRef100_P0AB14,UniRef:UniRef50_P0AB14,UniRef:UniRef90_P0AB14
contig_1	Pyrodigal	gene	1015535	1016131	.	-	.	ID=GCA000010485_00973_gene;locus_tag=GCA000010485_00973;gene=wrbA
contig_1	Pyrodigal	CDS	1015535	1016131	.	-	0	ID=GCA000010485_00973;Name=NAD(P)H:quinone oxidoreductase;locus_tag=GCA000010485_00973;product=NAD(P)H:quinone oxidoreductase;Dbxref=GO:0003955,GO:0008753,GO:0010181,GO:0016020,GO:0050136,GO:0050660,GO:0050661,GO:0051287;gene=wrbA;Parent=GCA000010485_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0655,RefSeq:WP_001151437.1,SO:0001217,UniParc:UPI000016399C,UniRef:UniRef100_P0A8G6,UniRef:UniRef50_P0A8G6,UniRef:UniRef90_P0A8G6;ec_number=1.6.5.2
contig_1	Pyrodigal	gene	1016504	1016677	.	+	.	ID=GCA000010485_00974_gene;locus_tag=GCA000010485_00974;gene=ymdF
contig_1	Pyrodigal	CDS	1016504	1016677	.	+	0	ID=GCA000010485_00974;Name=putative protein YmdF;locus_tag=GCA000010485_00974;product=putative protein YmdF;Dbxref=GO:0043709;gene=ymdF;Parent=GCA000010485_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3729,COG:R,KEGG:K06884,RefSeq:WP_001273658.1,SO:0001217,UniParc:UPI000013B995,UniRef:UniRef100_P56614,UniRef:UniRef50_P56614,UniRef:UniRef90_P56614
contig_1	Pyrodigal	gene	1016760	1018088	.	-	.	ID=GCA000010485_00975_gene;locus_tag=GCA000010485_00975;gene=rutG
contig_1	Pyrodigal	CDS	1016760	1018088	.	-	0	ID=GCA000010485_00975;Name=pyrimidine utilization transport protein G;locus_tag=GCA000010485_00975;product=pyrimidine utilization transport protein G;Dbxref=GO:0005350,GO:0005886,GO:0006212,GO:0006864,GO:0015210,GO:0015218,GO:0015505,GO:0016020,GO:0098721,GO:1904082;gene=rutG;Parent=GCA000010485_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,KEGG:K09016,RefSeq:WP_001295943.1,SO:0001217,UniParc:UPI0001C22A17,UniRef:UniRef100_A0A061YPP0,UniRef:UniRef50_P75892,UniRef:UniRef90_P75892
contig_1	Pyrodigal	gene	1018109	1018603	.	-	.	ID=GCA000010485_00976_gene;locus_tag=GCA000010485_00976;gene=rutF
contig_1	Pyrodigal	CDS	1018109	1018603	.	-	0	ID=GCA000010485_00976;Name=NADH-dependent FMN reductase RutF;locus_tag=GCA000010485_00976;product=NADH-dependent FMN reductase RutF;Dbxref=GO:0006212,GO:0008752,GO:0010181,GO:0019740,GO:0042602,GO:0052874;gene=rutF;Parent=GCA000010485_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001028098.1,SO:0001217,UniParc:UPI0001C22A50,UniRef:UniRef100_D2NGI4,UniRef:UniRef50_P75893,UniRef:UniRef90_P75893;ec_number=1.5.1.42
contig_1	Pyrodigal	gene	1018614	1019204	.	-	.	ID=GCA000010485_00977_gene;locus_tag=GCA000010485_00977;gene=rutE
contig_1	Pyrodigal	CDS	1018614	1019204	.	-	0	ID=GCA000010485_00977;Name=malonic semialdehyde reductase;locus_tag=GCA000010485_00977;product=malonic semialdehyde reductase;Dbxref=GO:0006212,GO:0016491,GO:0019740,GO:0035527;gene=rutE;Parent=GCA000010485_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_001001161.1,SO:0001217,UniParc:UPI0001C22A51,UniRef:UniRef100_A0A061YKG3,UniRef:UniRef50_P75894,UniRef:UniRef90_Q8XAU9;ec_number=1.1.1.298
contig_1	Pyrodigal	gene	1019214	1020014	.	-	.	ID=GCA000010485_00978_gene;locus_tag=GCA000010485_00978;gene=rutD
contig_1	Pyrodigal	CDS	1019214	1020014	.	-	0	ID=GCA000010485_00978;Name=pyrimidine utilization protein D;locus_tag=GCA000010485_00978;product=pyrimidine utilization protein D;Dbxref=GO:0006212,GO:0016020,GO:0016811,GO:0019740;gene=rutD;Parent=GCA000010485_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295944.1,SO:0001217,UniParc:UPI0001C22A52,UniRef:UniRef100_D2NGI6,UniRef:UniRef50_P75895,UniRef:UniRef90_P75895;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	1020022	1020408	.	-	.	ID=GCA000010485_00979_gene;locus_tag=GCA000010485_00979;gene=rutB
contig_1	Pyrodigal	CDS	1020022	1020408	.	-	0	ID=GCA000010485_00979;Name=pyrimidine utilization protein B;locus_tag=GCA000010485_00979;product=pyrimidine utilization protein B;Dbxref=GO:0005829,GO:0006212,GO:0016811,GO:0019239,GO:0019740;gene=rutB;Parent=GCA000010485_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,KEGG:K09021,RefSeq:WP_001126780.1,SO:0001217,UniParc:UPI000013A5E1,UniRef:UniRef100_P0AFQ5,UniRef:UniRef50_P0AFQ5,UniRef:UniRef90_P0AFQ5;ec_number=3.5.-.-
contig_1	Pyrodigal	gene	1020420	1021115	.	-	.	ID=GCA000010485_00980_gene;locus_tag=GCA000010485_00980;gene=rutB
contig_1	Pyrodigal	CDS	1020420	1021115	.	-	0	ID=GCA000010485_00980;Name=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;locus_tag=GCA000010485_00980;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;Dbxref=GO:0006212,GO:0016811,GO:0019740;gene=rutB;Parent=GCA000010485_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001393558,SO:0001217,UniRef:UniRef50_P75897,UniRef:UniRef90_D3H124;ec_number=3.5.1.110
contig_1	Pyrodigal	gene	1021112	1022203	.	-	.	ID=GCA000010485_00981_gene;locus_tag=GCA000010485_00981;gene=rutA
contig_1	Pyrodigal	CDS	1021112	1022203	.	-	0	ID=GCA000010485_00981;Name=pyrimidine utilization protein A;locus_tag=GCA000010485_00981;product=pyrimidine utilization protein A;Dbxref=GO:0006212,GO:0008726,GO:0010181,GO:0016491,GO:0019740,GO:0046306,GO:0052614;gene=rutA;Parent=GCA000010485_00981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,KEGG:K09018,RefSeq:WP_001295946.1,SO:0001217,UniParc:UPI0001E8D15D,UniRef:UniRef100_D2NGI9,UniRef:UniRef50_P75898,UniRef:UniRef90_P75898;ec_number=1.14.99.46
contig_1	Pyrodigal	gene	1022491	1023129	.	+	.	ID=GCA000010485_00982_gene;locus_tag=GCA000010485_00982;gene=rutR
contig_1	Pyrodigal	CDS	1022491	1023129	.	+	0	ID=GCA000010485_00982;Name=HTH-type transcriptional regulator RutR;locus_tag=GCA000010485_00982;product=HTH-type transcriptional regulator RutR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0045892,GO:0045893;gene=rutR;Parent=GCA000010485_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000191701.1,SO:0001217,UniParc:UPI000013A5D8,UniRef:UniRef100_P0ACU2,UniRef:UniRef50_P0ACU2,UniRef:UniRef90_P0ACU2
contig_1	Pyrodigal	gene	1023169	1027131	.	-	.	ID=GCA000010485_00983_gene;locus_tag=GCA000010485_00983;gene=putA
contig_1	Pyrodigal	CDS	1023169	1027131	.	-	0	ID=GCA000010485_00983;Name=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;locus_tag=GCA000010485_00983;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;Dbxref=GO:0003700,GO:0003842,GO:0004657,GO:0006355,GO:0006561,GO:0016620;gene=putA;Parent=GCA000010485_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295947.1,SO:0001217,UniParc:UPI0001C22A55,UniRef:UniRef100_A0A066SNG5,UniRef:UniRef50_P09546,UniRef:UniRef90_A0A1L1KBB7
contig_1	Pyrodigal	gene	1027186	1027395	.	+	.	ID=GCA000010485_00984_gene;locus_tag=GCA000010485_00984
contig_1	Pyrodigal	CDS	1027186	1027395	.	+	0	ID=GCA000010485_00984;Name=Pentapeptide repeat-containing protein;locus_tag=GCA000010485_00984;product=Pentapeptide repeat-containing protein;Parent=GCA000010485_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000979522.1,SO:0001217,UniParc:UPI0001C22A56,UniRef:UniRef100_A0A066SNR0,UniRef:UniRef50_A0A376FP10,UniRef:UniRef90_A0A376FP10
contig_1	Pyrodigal	gene	1027554	1029062	.	+	.	ID=GCA000010485_00985_gene;locus_tag=GCA000010485_00985;gene=putP
contig_1	Pyrodigal	CDS	1027554	1029062	.	+	0	ID=GCA000010485_00985;Name=sodium/proline symporter PutP;locus_tag=GCA000010485_00985;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0005886,GO:0006814,GO:0015193,GO:0015824,GO:0016020,GO:0031402,GO:0055085,GO:0071235;gene=putP;Parent=GCA000010485_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_001018504.1,SO:0001217,UniParc:UPI0001C22A57,UniRef:UniRef100_A0A061YPQ2,UniRef:UniRef50_P07117,UniRef:UniRef90_P07117
contig_1	Pyrodigal	gene	1029282	1030112	.	+	.	ID=GCA000010485_00986_gene;locus_tag=GCA000010485_00986;gene=efeU
contig_1	Pyrodigal	CDS	1029282	1030112	.	+	0	ID=GCA000010485_00986;Name=iron uptake transporter permease EfeU;locus_tag=GCA000010485_00986;product=iron uptake transporter permease EfeU;Dbxref=GO:0005381,GO:0015093,GO:0033573,GO:0034755;gene=efeU;Parent=GCA000010485_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07243,RefSeq:WP_000497959.1,SO:0001217,UniParc:UPI0001C22A58,UniRef:UniRef100_A0A066SSD7,UniRef:UniRef50_Q8FJ36,UniRef:UniRef90_Q8FJ36
contig_1	Pyrodigal	gene	1030170	1031297	.	+	.	ID=GCA000010485_00987_gene;locus_tag=GCA000010485_00987;gene=efeO
contig_1	Pyrodigal	CDS	1030170	1031297	.	+	0	ID=GCA000010485_00987;Name=iron uptake system protein EfeO;locus_tag=GCA000010485_00987;product=iron uptake system protein EfeO;Dbxref=GO:0006826,GO:0042597;gene=efeO;Parent=GCA000010485_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000154398,KEGG:K07224,RefSeq:WP_000154381.1,SO:0001217,UniParc:UPI000191E4AD,UniRef:UniRef100_E2QJQ9,UniRef:UniRef50_P0AB24,UniRef:UniRef90_P0AB24
contig_1	Pyrodigal	gene	1031303	1032574	.	+	.	ID=GCA000010485_00988_gene;locus_tag=GCA000010485_00988;gene=efeB
contig_1	Pyrodigal	CDS	1031303	1032574	.	+	0	ID=GCA000010485_00988;Name=iron uptake transporter deferrochelatase/peroxidase subunit;locus_tag=GCA000010485_00988;product=iron uptake transporter deferrochelatase/peroxidase subunit;Dbxref=GO:0004325,GO:0004601,GO:0005829,GO:0020037,GO:0033212,GO:0042597,GO:0046872;gene=efeB;Parent=GCA000010485_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16301,RefSeq:WP_001199134.1,SO:0001217,UniParc:UPI0001C22A59,UniRef:UniRef100_A0A066SNQ6,UniRef:UniRef50_Q8XAS4,UniRef:UniRef90_Q8XAS4;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	1032925	1033989	.	+	.	ID=GCA000010485_00989_gene;locus_tag=GCA000010485_00989;gene=phoH
contig_1	Pyrodigal	CDS	1032925	1033989	.	+	0	ID=GCA000010485_00989;Name=phosphate starvation-inducible protein PhoH;locus_tag=GCA000010485_00989;product=phosphate starvation-inducible protein PhoH;Dbxref=GO:0005524,GO:0005829;gene=phoH;Parent=GCA000010485_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06217,SO:0001217,UniParc:UPI0001C22A5A,UniRef:UniRef100_A0A1U9U1X3,UniRef:UniRef50_P0A9K1,UniRef:UniRef90_P0A9K1
contig_1	Infernal	gene	1033791	1033984	.	-	.	ID=GCA000010485_00990_gene;locus_tag=GCA000010485_00990;gene=Ysr251
contig_1	Infernal	ncRNA	1033791	1033984	1.1e-30	-	.	ID=GCA000010485_00990;Name=Yersinia sRNA 251;locus_tag=GCA000010485_00990;product=Yersinia sRNA 251;Dbxref=RFAM:RF02855;Parent=GCA000010485_00990_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02855
contig_1	Pyrodigal	gene	1034039	1034452	.	-	.	ID=GCA000010485_00991_gene;locus_tag=GCA000010485_00991;gene=pgaD
contig_1	Pyrodigal	CDS	1034039	1034452	.	-	0	ID=GCA000010485_00991;Name=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;locus_tag=GCA000010485_00991;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;gene=pgaD;Parent=GCA000010485_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11937,RefSeq:WP_001061089.1,SO:0001217,UniParc:UPI0001C22A5B,UniRef:UniRef100_A0A066SWE3,UniRef:UniRef50_P69432,UniRef:UniRef90_A0A0D8VWU3
contig_1	Pyrodigal	gene	1034454	1035779	.	-	.	ID=GCA000010485_00992_gene;locus_tag=GCA000010485_00992;gene=pgaC
contig_1	Pyrodigal	CDS	1034454	1035779	.	-	0	ID=GCA000010485_00992;Name=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;locus_tag=GCA000010485_00992;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;Dbxref=GO:0005886,GO:0008375,GO:0042710,GO:0043708;gene=pgaC;Parent=GCA000010485_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000610443.1,SO:0001217,UniParc:UPI0001C22A5C,UniRef:UniRef100_A0A1U9U1S6,UniRef:UniRef50_P75905,UniRef:UniRef90_P75905;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	1035772	1037790	.	-	.	ID=GCA000010485_00993_gene;locus_tag=GCA000010485_00993;gene=pgaB
contig_1	Pyrodigal	CDS	1035772	1037790	.	-	0	ID=GCA000010485_00993;Name=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;locus_tag=GCA000010485_00993;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;Dbxref=GO:0004553,GO:0005975,GO:0009279,GO:0016810,GO:0043708,GO:0044010,GO:0098732;gene=pgaB;Parent=GCA000010485_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11931,RefSeq:WP_000945575.1,SO:0001217,UniParc:UPI0001C22A5D,UniRef:UniRef100_A0A061KYR7,UniRef:UniRef50_P75906,UniRef:UniRef90_P75906;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	1037799	1040222	.	-	.	ID=GCA000010485_00994_gene;locus_tag=GCA000010485_00994;gene=pgaA
contig_1	Pyrodigal	CDS	1037799	1040222	.	-	0	ID=GCA000010485_00994;Name=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;locus_tag=GCA000010485_00994;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;Dbxref=GO:0009279,GO:0015159,GO:0015774,GO:0044010,GO:1901515;gene=pgaA;Parent=GCA000010485_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000287436.1,SO:0001217,UniParc:UPI0001C22A5E,UniRef:UniRef100_A0A066SNQ1,UniRef:UniRef50_P69434,UniRef:UniRef90_P69434
contig_1	Pyrodigal	gene	1040808	1042175	.	+	.	ID=GCA000010485_00995_gene;locus_tag=GCA000010485_00995;gene=dgcT
contig_1	Pyrodigal	CDS	1040808	1042175	.	+	0	ID=GCA000010485_00995;Name=putative diguanylate cyclase DgcT;locus_tag=GCA000010485_00995;product=putative diguanylate cyclase DgcT;Dbxref=GO:0005525,GO:0005886,GO:0046872,GO:0052621,GO:0090609;gene=dgcT;Parent=GCA000010485_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000409838.1,SO:0001217,UniParc:UPI0002A32B84,UniRef:UniRef100_A0A061L0N5,UniRef:UniRef50_P75908,UniRef:UniRef90_P75908;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1042172	1042276	.	+	.	ID=GCA000010485_00996_gene;locus_tag=GCA000010485_00996
contig_1	Pyrodigal	CDS	1042172	1042276	.	+	0	ID=GCA000010485_00996;Name=hypothetical protein;locus_tag=GCA000010485_00996;product=hypothetical protein;Parent=GCA000010485_00996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A34F26,UniRef:UniRef100_A0AA36KW77,UniRef:UniRef50_A0A0A6S3Y6,UniRef:UniRef90_A0A0D8VKA7
contig_1	tRNAscan-SE	gene	1042280	1042367	.	-	.	ID=GCA000010485_00997_gene;locus_tag=GCA000010485_00997;gene=trnS
contig_1	tRNAscan-SE	tRNA	1042280	1042367	.	-	.	ID=GCA000010485_00997;Name=tRNA-Ser(gga);locus_tag=GCA000010485_00997;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000010485_00997_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	1042601	1043539	.	+	.	ID=GCA000010485_00998_gene;locus_tag=GCA000010485_00998;gene=ghrA
contig_1	Pyrodigal	CDS	1042601	1043539	.	+	0	ID=GCA000010485_00998;Name=glyoxylate/hydroxypyruvate reductase GhrA;locus_tag=GCA000010485_00998;product=glyoxylate/hydroxypyruvate reductase GhrA;Dbxref=GO:0005829,GO:0008465,GO:0016618,GO:0030267,GO:0051287,GO:0120509;gene=ghrA;Parent=GCA000010485_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,RefSeq:WP_000351279.1,SO:0001217,UniParc:UPI0001C22A60,UniRef:UniRef100_A0A061KW22,UniRef:UniRef50_P75913,UniRef:UniRef90_P75913;ec_number=1.1.1.81
contig_1	Pyrodigal	gene	1043594	1044331	.	+	.	ID=GCA000010485_00999_gene;locus_tag=GCA000010485_00999;gene=ycdX
contig_1	Pyrodigal	CDS	1043594	1044331	.	+	0	ID=GCA000010485_00999;Name=zinc-binding phosphatase;locus_tag=GCA000010485_00999;product=zinc-binding phosphatase;Dbxref=GO:0005829,GO:0008270,GO:0016791,GO:0042578,GO:0042802,GO:0071978;gene=ycdX;Parent=GCA000010485_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000283667,COG:COG1387,COG:ER,RefSeq:WP_000283670.1,SO:0001217,UniParc:UPI0001C22A61,UniRef:UniRef100_A0A066SSD1,UniRef:UniRef50_P75914,UniRef:UniRef90_P75914;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	1044355	1044909	.	+	.	ID=GCA000010485_01000_gene;locus_tag=GCA000010485_01000;gene=ycdY
contig_1	Pyrodigal	CDS	1044355	1044909	.	+	0	ID=GCA000010485_01000;Name=molecular chaperone YcdY;locus_tag=GCA000010485_01000;product=molecular chaperone YcdY;Dbxref=GO:0005829,GO:0006974,GO:0071978;gene=ycdY;Parent=GCA000010485_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001001921,COG:COG3381,COG:O,RefSeq:WP_001001921.1,SO:0001217,UniParc:UPI000013A5F0,UniRef:UniRef100_P75915,UniRef:UniRef50_P75915,UniRef:UniRef90_P75915
contig_1	Pyrodigal	gene	1044981	1045502	.	+	.	ID=GCA000010485_01001_gene;locus_tag=GCA000010485_01001;gene=ycdZ
contig_1	Pyrodigal	CDS	1044981	1045502	.	+	0	ID=GCA000010485_01001;Name=Inner membrane protein YcdZ;locus_tag=GCA000010485_01001;product=Inner membrane protein YcdZ;Dbxref=GO:0005886;gene=ycdZ;Parent=GCA000010485_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DBD2F5,UniRef:UniRef100_A0A0D6IEB2,UniRef:UniRef50_P75916,UniRef:UniRef90_P75916
contig_1	Pyrodigal	gene	1045567	1046400	.	-	.	ID=GCA000010485_01002_gene;locus_tag=GCA000010485_01002;gene=cgsG
contig_1	Pyrodigal	CDS	1045567	1046400	.	-	0	ID=GCA000010485_01002;Name=curli production assembly/transport protein CsgG;locus_tag=GCA000010485_01002;product=curli production assembly/transport protein CsgG;Dbxref=GO:0005886,GO:0030288;gene=cgsG;Parent=GCA000010485_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1462,COG:W,KEGG:K06214,RefSeq:WP_001189322.1,SO:0001217,UniParc:UPI0001C22A62,UniRef:UniRef100_A0A061L0P1,UniRef:UniRef50_P0A204,UniRef:UniRef90_P0A204,VFDB:VFC0001,VFDB:VFG045788
contig_1	Pyrodigal	gene	1046427	1046843	.	-	.	ID=GCA000010485_01003_gene;locus_tag=GCA000010485_01003;gene=csgF
contig_1	Pyrodigal	CDS	1046427	1046843	.	-	0	ID=GCA000010485_01003;Name=curli production assembly/transport protein CsgF;locus_tag=GCA000010485_01003;product=curli production assembly/transport protein CsgF;gene=csgF;Parent=GCA000010485_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6061,COG:U,KEGG:K04338,RefSeq:WP_001264082.1,SO:0001217,UniParc:UPI0001C22A63,UniRef:UniRef100_A0A061YCU6,UniRef:UniRef50_P0A202,UniRef:UniRef90_Q32HP1,VFDB:VFC0001,VFDB:VFG045789
contig_1	Pyrodigal	gene	1046868	1047257	.	-	.	ID=GCA000010485_01004_gene;locus_tag=GCA000010485_01004;gene=csgE
contig_1	Pyrodigal	CDS	1046868	1047257	.	-	0	ID=GCA000010485_01004;Name=curli production assembly/transport protein CsgE;locus_tag=GCA000010485_01004;product=curli production assembly/transport protein CsgE;Dbxref=GO:0009279,GO:0042802,GO:0044010,GO:0062155,GO:0071806,GO:0098775,GO:0098777;gene=csgE;Parent=GCA000010485_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6060,COG:U,KEGG:K04337,RefSeq:WP_000833288.1,SO:0001217,UniParc:UPI0000128531,UniRef:UniRef100_P0AE95,UniRef:UniRef50_P0AE95,UniRef:UniRef90_P0AE95,VFDB:VFC0001,VFDB:VFG045790
contig_1	Pyrodigal	gene	1047262	1047912	.	-	.	ID=GCA000010485_01005_gene;locus_tag=GCA000010485_01005;gene=csgD
contig_1	Pyrodigal	CDS	1047262	1047912	.	-	0	ID=GCA000010485_01005;Name=transcriptional regulator CsgD;locus_tag=GCA000010485_01005;product=transcriptional regulator CsgD;Dbxref=GO:0000976,GO:0000987,GO:0001216,GO:0001217,GO:0003677,GO:0005886,GO:0006355,GO:0032993,GO:0042802,GO:1900190,GO:2000144;gene=csgD;Parent=GCA000010485_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000481500.1,SO:0001217,UniParc:UPI00000D07F7,UniRef:UniRef100_B2CY47,UniRef:UniRef50_P52106,UniRef:UniRef90_P52106,VFDB:VFC0001,VFDB:VFG045791
contig_1	Infernal	gene	1047967	1048058	.	-	.	ID=GCA000010485_01006_gene;locus_tag=GCA000010485_01006;gene=ES056
contig_1	Infernal	ncRNA	1047967	1048058	2.7e-21	-	.	ID=GCA000010485_01006;Name=ES056 sRNA;locus_tag=GCA000010485_01006;product=ES056 sRNA;Dbxref=RFAM:RF02752;Parent=GCA000010485_01006_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02752
contig_1	Pyrodigal	gene	1048665	1049120	.	+	.	ID=GCA000010485_01007_gene;locus_tag=GCA000010485_01007;gene=csgB
contig_1	Pyrodigal	CDS	1048665	1049120	.	+	0	ID=GCA000010485_01007;Name=curli minor subunit CsgB;locus_tag=GCA000010485_01007;product=curli minor subunit CsgB;Dbxref=GO:0007155,GO:0009279,GO:0009289,GO:0042802,GO:0044010,GO:0098775,GO:1905906,GO:1990000;gene=csgB;Parent=GCA000010485_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791650.1,SO:0001217,UniParc:UPI0000000A5E,UniRef:UniRef100_P0ABK7,UniRef:UniRef50_P0ABK7,UniRef:UniRef90_P0ABK7
contig_1	Pyrodigal	gene	1049161	1049619	.	+	.	ID=GCA000010485_01008_gene;locus_tag=GCA000010485_01008;gene=csgA
contig_1	Pyrodigal	CDS	1049161	1049619	.	+	0	ID=GCA000010485_01008;Name=curli major subunit CsgA;locus_tag=GCA000010485_01008;product=curli major subunit CsgA;gene=csgA;Parent=GCA000010485_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000771429.1,SO:0001217,UniParc:UPI00005EF8EB,UniRef:UniRef100_A0A061LPH5,UniRef:UniRef50_P28307,UniRef:UniRef90_A0A0H2V6A7
contig_1	Pyrodigal	gene	1049679	1050011	.	+	.	ID=GCA000010485_01009_gene;locus_tag=GCA000010485_01009;gene=csgC
contig_1	Pyrodigal	CDS	1049679	1050011	.	+	0	ID=GCA000010485_01009;Name=curli assembly protein CsgC;locus_tag=GCA000010485_01009;product=curli assembly protein CsgC;Dbxref=GO:0042597;gene=csgC;Parent=GCA000010485_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04336,RefSeq:WP_000992818.1,SO:0001217,UniParc:UPI00000D07F8,UniRef:UniRef100_B7MII3,UniRef:UniRef50_P52107,UniRef:UniRef90_P52107,VFDB:VFC0001,VFDB:VFG045794
contig_1	Pyrodigal	gene	1050132	1050443	.	+	.	ID=GCA000010485_01010_gene;locus_tag=GCA000010485_01010
contig_1	Pyrodigal	CDS	1050132	1050443	.	+	0	ID=GCA000010485_01010;Name=Type 1 fimbrial protein;locus_tag=GCA000010485_01010;product=Type 1 fimbrial protein;Parent=GCA000010485_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000489584.1,SO:0001217,UniParc:UPI0001C22A64,UniRef:UniRef100_A0A061YE01,UniRef:UniRef50_P75917,UniRef:UniRef90_Q32E72
contig_1	Pyrodigal	gene	1050538	1051071	.	+	.	ID=GCA000010485_01011_gene;locus_tag=GCA000010485_01011;gene=ymdB
contig_1	Pyrodigal	CDS	1050538	1051071	.	+	0	ID=GCA000010485_01011;Name=O-acetyl-ADP-ribose deacetylase;locus_tag=GCA000010485_01011;product=O-acetyl-ADP-ribose deacetylase;Dbxref=GO:0001883,GO:0003824,GO:0008428,GO:0042278,GO:0061463;gene=ymdB;Parent=GCA000010485_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2110,COG:J,RefSeq:WP_000857405.1,SO:0001217,UniParc:UPI000013B991,UniRef:UniRef100_P0A8D6,UniRef:UniRef50_P0A8D6,UniRef:UniRef90_P0A8D6;ec_number=3.1.1.106
contig_1	Pyrodigal	gene	1051013	1052494	.	+	.	ID=GCA000010485_01012_gene;locus_tag=GCA000010485_01012;gene=clsC
contig_1	Pyrodigal	CDS	1051013	1052494	.	+	0	ID=GCA000010485_01012;Name=cardiolipin synthase ClsC;locus_tag=GCA000010485_01012;product=cardiolipin synthase ClsC;Dbxref=GO:0032049,GO:0090483;gene=clsC;Parent=GCA000010485_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001299031,COG:COG1502,COG:I,KEGG:K06132,RefSeq:WP_001311599.1,SO:0001217,UniParc:UPI0001C22A65,UniRef:UniRef100_A0A3K2VWA7,UniRef:UniRef50_P75919,UniRef:UniRef90_P75919;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1052502	1053659	.	-	.	ID=GCA000010485_01013_gene;locus_tag=GCA000010485_01013;gene=mdoC
contig_1	Pyrodigal	CDS	1052502	1053659	.	-	0	ID=GCA000010485_01013;Name=glucans biosynthesis protein MdoC;locus_tag=GCA000010485_01013;product=glucans biosynthesis protein MdoC;Dbxref=GO:0005886,GO:0009250,GO:0016740,GO:0016741,GO:0016747;gene=mdoC;Parent=GCA000010485_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11941,RefSeq:WP_001070347.1,SO:0001217,UniParc:UPI0001C22A66,UniRef:UniRef100_A0A066SSB9,UniRef:UniRef50_P75920,UniRef:UniRef90_P75920;ec_number=2.1.-.-
contig_1	Pyrodigal	gene	1054086	1055588	.	+	.	ID=GCA000010485_01014_gene;locus_tag=GCA000010485_01014;gene=mdoG
contig_1	Pyrodigal	CDS	1054086	1055588	.	+	0	ID=GCA000010485_01014;Name=glucans biosynthesis protein MdoG;locus_tag=GCA000010485_01014;product=glucans biosynthesis protein MdoG;Dbxref=GO:0003824,GO:0030246,GO:0030288,GO:0051274;gene=mdoG;Parent=GCA000010485_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001562609,COG:COG3131,COG:M,KEGG:K03670,RefSeq:WP_001305892.1,SO:0001217,UniParc:UPI00005F0A59,UniRef:UniRef100_A1A9U6,UniRef:UniRef50_P33136,UniRef:UniRef90_P33136
contig_1	Pyrodigal	gene	1055611	1058124	.	+	.	ID=GCA000010485_01015_gene;locus_tag=GCA000010485_01015;gene=mdoH
contig_1	Pyrodigal	CDS	1055611	1058124	.	+	0	ID=GCA000010485_01015;Name=glucans biosynthesis glucosyltransferase MdoH;locus_tag=GCA000010485_01015;product=glucans biosynthesis glucosyltransferase MdoH;Dbxref=GO:0005886,GO:0009250,GO:0016758;gene=mdoH;Parent=GCA000010485_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2943,COG:MG,KEGG:K03669,SO:0001217,UniParc:UPI000170F199,UniRef:UniRef100_Q8FIS3,UniRef:UniRef50_Q8FIS3,UniRef:UniRef90_Q8FIS3;ec_number=2.4.1.-
contig_1	Infernal	gene	1058156	1058198	.	-	.	ID=GCA000010485_01016_gene;locus_tag=GCA000010485_01016;gene=ES036
contig_1	Infernal	ncRNA	1058156	1058198	2.3e-06	-	.	ID=GCA000010485_01016;Name=ES036 (CssrF) sRNA;locus_tag=GCA000010485_01016;product=ES036 (CssrF) sRNA;Dbxref=RFAM:RF02751;Parent=GCA000010485_01016_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02751
contig_1	Pyrodigal	gene	1058296	1058523	.	+	.	ID=GCA000010485_01017_gene;locus_tag=GCA000010485_01017;gene=yceK
contig_1	Pyrodigal	CDS	1058296	1058523	.	+	0	ID=GCA000010485_01017;Name=YceK/YidQ family lipoprotein;locus_tag=GCA000010485_01017;product=YceK/YidQ family lipoprotein;Dbxref=GO:0006974;gene=yceK;Parent=GCA000010485_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5645,COG:S,RefSeq:WP_001237205.1,SO:0001217,UniParc:UPI000013A60F,UniRef:UniRef100_P0AB31,UniRef:UniRef50_P0AB31,UniRef:UniRef90_P0AB31
contig_1	Pyrodigal	gene	1058524	1058898	.	-	.	ID=GCA000010485_01018_gene;locus_tag=GCA000010485_01018;gene=mysB
contig_1	Pyrodigal	CDS	1058524	1058898	.	-	0	ID=GCA000010485_01018;Name=MysB family protein;locus_tag=GCA000010485_01018;product=MysB family protein;gene=mysB;Parent=GCA000010485_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12147,RefSeq:WP_001295957.1,SO:0001217,UniParc:UPI00005EF8F1,UniRef:UniRef100_E2QJT5,UniRef:UniRef50_B7LT83,UniRef:UniRef90_B7LT83
contig_1	Pyrodigal	gene	1058981	1060207	.	-	.	ID=GCA000010485_01019_gene;locus_tag=GCA000010485_01019;gene=mdtG
contig_1	Pyrodigal	CDS	1058981	1060207	.	-	0	ID=GCA000010485_01019;Name=multidrug efflux MFS transporter MdtG;locus_tag=GCA000010485_01019;product=multidrug efflux MFS transporter MdtG;Dbxref=GO:0005886,GO:0022857,GO:0046677,GO:0055085;gene=mdtG;Parent=GCA000010485_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08161,RefSeq:WP_000074171.1,SO:0001217,UniParc:UPI0000D50838,UniRef:UniRef100_B7UP67,UniRef:UniRef50_P25744,UniRef:UniRef90_P25744
contig_1	Pyrodigal	gene	1060379	1061299	.	-	.	ID=GCA000010485_01020_gene;locus_tag=GCA000010485_01020;gene=lpxL
contig_1	Pyrodigal	CDS	1060379	1061299	.	-	0	ID=GCA000010485_01020;Name=kdo(2)-lipid IV(A) lauroyltransferase;locus_tag=GCA000010485_01020;product=kdo(2)-lipid IV(A) lauroyltransferase;gene=lpxL;Parent=GCA000010485_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000183364,KEGG:K02517,RefSeq:WP_001295958.1,SO:0001217,UniParc:UPI0000E44F34,UniRef:UniRef100_E2QKD8,UniRef:UniRef50_P0ACV2,UniRef:UniRef90_E2QKD8;ec_number=2.3.1.241
contig_1	Pyrodigal	gene	1061524	1062576	.	+	.	ID=GCA000010485_01021_gene;locus_tag=GCA000010485_01021;gene=trhO
contig_1	Pyrodigal	CDS	1061524	1062576	.	+	0	ID=GCA000010485_01021;Name=rhodanese-related sulfurtransferase;locus_tag=GCA000010485_01021;product=rhodanese-related sulfurtransferase;Dbxref=GO:0006400,GO:0016705;gene=trhO;Parent=GCA000010485_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07146,RefSeq:WP_001295959.1,SO:0001217,UniParc:UPI0001C22AA7,UniRef:UniRef100_A0A061YDZ1,UniRef:UniRef50_P24188,UniRef:UniRef90_B7MIJ6;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	1062618	1063193	.	-	.	ID=GCA000010485_01022_gene;locus_tag=GCA000010485_01022;gene=yceI
contig_1	Pyrodigal	CDS	1062618	1063193	.	-	0	ID=GCA000010485_01022;Name=YceI family protein;locus_tag=GCA000010485_01022;product=YceI family protein;Dbxref=GO:0042597;gene=yceI;Parent=GCA000010485_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000749265.1,SO:0001217,UniParc:UPI0001C22AA8,UniRef:UniRef100_A0A061KYU4,UniRef:UniRef50_P0A8X2,UniRef:UniRef90_P0A8X2
contig_1	Pyrodigal	gene	1063197	1063763	.	-	.	ID=GCA000010485_01023_gene;locus_tag=GCA000010485_01023;gene=yceJ
contig_1	Pyrodigal	CDS	1063197	1063763	.	-	0	ID=GCA000010485_01023;Name=Cytochrome b561-like protein;locus_tag=GCA000010485_01023;product=Cytochrome b561-like protein;Dbxref=GO:0005886,GO:0009055,GO:0020037,GO:0022904,GO:0046872;gene=yceJ;Parent=GCA000010485_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3038,RefSeq:WP_000011128.1,SO:0001217,UniParc:UPI0001C22AA9,UniRef:UniRef100_A0A061L1G5,UniRef:UniRef50_P75925,UniRef:UniRef90_P75925
contig_1	Pyrodigal	gene	1064024	1064137	.	-	.	ID=GCA000010485_01024_gene;locus_tag=GCA000010485_01024;gene=yceO
contig_1	Pyrodigal	CDS	1064024	1064137	.	-	0	ID=GCA000010485_01024;Name=putative protein YceO;locus_tag=GCA000010485_01024;product=putative protein YceO;Dbxref=GO:0010447,GO:0044010;gene=yceO;Parent=GCA000010485_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001253418.1,SO:0001217,UniParc:UPI000018F7ED,UniRef:UniRef100_P64442,UniRef:UniRef50_P64442,UniRef:UniRef90_P64442
contig_1	Pyrodigal	gene	1064185	1065303	.	-	.	ID=GCA000010485_01025_gene;locus_tag=GCA000010485_01025;gene=solA
contig_1	Pyrodigal	CDS	1064185	1065303	.	-	0	ID=GCA000010485_01025;Name=N-methyl-L-tryptophan oxidase;locus_tag=GCA000010485_01025;product=N-methyl-L-tryptophan oxidase;Dbxref=GO:0005829,GO:0008115,GO:0050131,GO:0050660;gene=solA;Parent=GCA000010485_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0665,COG:E,RefSeq:WP_000872785.1,SO:0001217,UniParc:UPI0001C22AAA,UniRef:UniRef100_A0A066SWB6,UniRef:UniRef50_P40874,UniRef:UniRef90_P40874;ec_number=1.5.3.2
contig_1	Pyrodigal	gene	1065418	1065672	.	-	.	ID=GCA000010485_01026_gene;locus_tag=GCA000010485_01026;gene=bssS
contig_1	Pyrodigal	CDS	1065418	1065672	.	-	0	ID=GCA000010485_01026;Name=biofilm formation regulator BssS;locus_tag=GCA000010485_01026;product=biofilm formation regulator BssS;Dbxref=GO:0090609,GO:1900190;gene=bssS;Parent=GCA000010485_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12148,RefSeq:WP_000414438.1,SO:0001217,UniParc:UPI000013A613,UniRef:UniRef100_P0AB33,UniRef:UniRef50_P0AB33,UniRef:UniRef90_P0AB33
contig_1	Pyrodigal	gene	1065961	1066206	.	-	.	ID=GCA000010485_01027_gene;locus_tag=GCA000010485_01027;gene=mdtH
contig_1	Pyrodigal	CDS	1065961	1066206	.	-	0	ID=GCA000010485_01027;Name=multidrug efflux MFS transporter MdtH;locus_tag=GCA000010485_01027;product=multidrug efflux MFS transporter MdtH;Dbxref=GO:0006281,GO:0009432,GO:0022857,GO:0055085;gene=mdtH;Parent=GCA000010485_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217754.1,SO:0001217,UniParc:UPI000011190F,UniRef:UniRef100_P0ABR1,UniRef:UniRef50_P0ABR1,UniRef:UniRef90_P0ABR1
contig_1	Pyrodigal	gene	1066283	1067326	.	-	.	ID=GCA000010485_01028_gene;locus_tag=GCA000010485_01028;gene=pyrC
contig_1	Pyrodigal	CDS	1066283	1067326	.	-	0	ID=GCA000010485_01028;Name=dihydroorotase;locus_tag=GCA000010485_01028;product=dihydroorotase;Dbxref=GO:0004151,GO:0005829,GO:0006207,GO:0008270,GO:0019856,GO:0044205;gene=pyrC;Parent=GCA000010485_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0418,COG:F,RefSeq:WP_000126542.1,SO:0001217,UniParc:UPI0001C22AAB,UniRef:UniRef100_B7UP76,UniRef:UniRef50_P05020,UniRef:UniRef90_P05020;ec_number=3.5.2.3
contig_1	Infernal	regulatory_region	1067327	1067376	3.1e-10	-	.	ID=EFPPCJGBKI_323;Name=PyrC leader;product=PyrC leader;Dbxref=RFAM:RF02372;inference=profile:Rfam:RF02372;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1067432	1067992	.	-	.	ID=GCA000010485_01029_gene;locus_tag=GCA000010485_01029;gene=yceB
contig_1	Pyrodigal	CDS	1067432	1067992	.	-	0	ID=GCA000010485_01029;Name=lipoprotein;locus_tag=GCA000010485_01029;product=lipoprotein;Dbxref=GO:0005886;gene=yceB;Parent=GCA000010485_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295443.1,SO:0001217,UniParc:UPI000013A603,UniRef:UniRef100_P0AB26,UniRef:UniRef50_P0AB26,UniRef:UniRef90_P0AB26
contig_1	Pyrodigal	gene	1068126	1068773	.	-	.	ID=GCA000010485_01030_gene;locus_tag=GCA000010485_01030;gene=grxB
contig_1	Pyrodigal	CDS	1068126	1068773	.	-	0	ID=GCA000010485_01030;Name=glutaredoxin 2;locus_tag=GCA000010485_01030;product=glutaredoxin 2;Dbxref=GO:0004362,GO:0005515,GO:0005829,GO:0006749,GO:0015038;gene=grxB;Parent=GCA000010485_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2999,COG:O,RefSeq:WP_000780912.1,SO:0001217,UniParc:UPI000011304B,UniRef:UniRef100_P0AC59,UniRef:UniRef50_P0AC59,UniRef:UniRef90_P0AC59
contig_1	Pyrodigal	gene	1068837	1070045	.	-	.	ID=GCA000010485_01031_gene;locus_tag=GCA000010485_01031;gene=mdtH
contig_1	Pyrodigal	CDS	1068837	1070045	.	-	0	ID=GCA000010485_01031;Name=multidrug efflux MFS transporter MdtH;locus_tag=GCA000010485_01031;product=multidrug efflux MFS transporter MdtH;Dbxref=GO:0005886,GO:0022857,GO:0046677,GO:0055085;gene=mdtH;Parent=GCA000010485_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08162,RefSeq:WP_000092206.1,SO:0001217,UniParc:UPI000013A611,UniRef:UniRef100_P69367,UniRef:UniRef50_P69367,UniRef:UniRef90_P69367
contig_1	Pyrodigal	gene	1070281	1070865	.	+	.	ID=GCA000010485_01032_gene;locus_tag=GCA000010485_01032;gene=rimJ
contig_1	Pyrodigal	CDS	1070281	1070865	.	+	0	ID=GCA000010485_01032;Name=ribosomal protein S5-alanine N-acetyltransferase;locus_tag=GCA000010485_01032;product=ribosomal protein S5-alanine N-acetyltransferase;Dbxref=GO:0005737,GO:0008080,GO:0008999;gene=rimJ;Parent=GCA000010485_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000468182.1,SO:0001217,UniParc:UPI00000DEA02,UniRef:UniRef100_E2QKF0,UniRef:UniRef50_P0A948,UniRef:UniRef90_P0A948;ec_number=2.3.1.267
contig_1	Pyrodigal	gene	1070876	1071523	.	+	.	ID=GCA000010485_01033_gene;locus_tag=GCA000010485_01033;gene=yceH
contig_1	Pyrodigal	CDS	1070876	1071523	.	+	0	ID=GCA000010485_01033;Name=UPF0502 protein YceH;locus_tag=GCA000010485_01033;product=UPF0502 protein YceH;Dbxref=GO:0005829;gene=yceH;Parent=GCA000010485_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3132,COG:S,KEGG:K09915,RefSeq:WP_000877123.1,SO:0001217,UniParc:UPI0001C22AAC,UniRef:UniRef100_A0A061KYV5,UniRef:UniRef50_P29217,UniRef:UniRef90_P29217
contig_1	Pyrodigal	gene	1071525	1072448	.	+	.	ID=GCA000010485_01034_gene;locus_tag=GCA000010485_01034;gene=yceM
contig_1	Pyrodigal	CDS	1071525	1072448	.	+	0	ID=GCA000010485_01034;Name=Putative oxidoreductase YceM;locus_tag=GCA000010485_01034;product=Putative oxidoreductase YceM;Dbxref=GO:0000166,GO:0016491;gene=yceM;Parent=GCA000010485_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000736146.1,SO:0001217,UniParc:UPI0001C22AAD,UniRef:UniRef100_A0A066SX18,UniRef:UniRef50_P37168,UniRef:UniRef90_P75931;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1072558	1074093	.	+	.	ID=GCA000010485_01035_gene;locus_tag=GCA000010485_01035;gene=murJ
contig_1	Pyrodigal	CDS	1072558	1074093	.	+	0	ID=GCA000010485_01035;Name=murein biosynthesis integral membrane protein MurJ;locus_tag=GCA000010485_01035;product=murein biosynthesis integral membrane protein MurJ;Dbxref=GO:0000935,GO:0005886,GO:0008360,GO:0009252,GO:0015648,GO:0015836,GO:0034203,GO:0034204,GO:0071555,GO:1901612;gene=murJ;Parent=GCA000010485_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0728,COG:M,RefSeq:WP_001050672.1,SO:0001217,UniParc:UPI00000DEA05,UniRef:UniRef100_A0A658Y1F5,UniRef:UniRef50_P0AF16,UniRef:UniRef90_P0AF16
contig_1	Pyrodigal	gene	1074133	1074549	.	-	.	ID=GCA000010485_01036_gene;locus_tag=GCA000010485_01036;gene=flgN
contig_1	Pyrodigal	CDS	1074133	1074549	.	-	0	ID=GCA000010485_01036;Name=flagella biosynthesis chaperone FlgN;locus_tag=GCA000010485_01036;product=flagella biosynthesis chaperone FlgN;Dbxref=GO:0005737,GO:0044780;gene=flgN;Parent=GCA000010485_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02399,RefSeq:WP_000197357.1,SO:0001217,UniParc:UPI0001C22AAE,UniRef:UniRef100_A0A066SSA1,UniRef:UniRef50_P43533,UniRef:UniRef90_P43533
contig_1	Pyrodigal	gene	1074554	1074847	.	-	.	ID=GCA000010485_01037_gene;locus_tag=GCA000010485_01037;gene=flgM
contig_1	Pyrodigal	CDS	1074554	1074847	.	-	0	ID=GCA000010485_01037;Name=flagellar biosynthesis anti-sigma factor FlgM;locus_tag=GCA000010485_01037;product=flagellar biosynthesis anti-sigma factor FlgM;Dbxref=GO:0044781,GO:0045892;gene=flgM;Parent=GCA000010485_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2747,COG:KN,RefSeq:WP_000020884.1,SO:0001217,UniParc:UPI00000D5DFF,UniRef:UniRef100_C3TE92,UniRef:UniRef50_P0AEM4,UniRef:UniRef90_P0AEM4
contig_1	Pyrodigal	gene	1074923	1075582	.	-	.	ID=GCA000010485_01038_gene;locus_tag=GCA000010485_01038;gene=flgA
contig_1	Pyrodigal	CDS	1074923	1075582	.	-	0	ID=GCA000010485_01038;Name=Flagella basal body P-ring formation protein FlgA;locus_tag=GCA000010485_01038;product=Flagella basal body P-ring formation protein FlgA;Dbxref=GO:0042597,GO:0044780,GO:0071973;gene=flgA;Parent=GCA000010485_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1261,COG:N,KEGG:K02386,RefSeq:WP_000955721.1,SO:0001217,UniParc:UPI0001C22AAF,UniRef:UniRef100_A0A061YA08,UniRef:UniRef50_P75933,UniRef:UniRef90_P75933
contig_1	Pyrodigal	gene	1075737	1076153	.	+	.	ID=GCA000010485_01039_gene;locus_tag=GCA000010485_01039;gene=flgB
contig_1	Pyrodigal	CDS	1075737	1076153	.	+	0	ID=GCA000010485_01039;Name=flagellar basal body rod protein FlgB;locus_tag=GCA000010485_01039;product=flagellar basal body rod protein FlgB;Dbxref=GO:0030694,GO:0071973;gene=flgB;Parent=GCA000010485_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1815,COG:N,RefSeq:WP_000884697.1,SO:0001217,UniParc:UPI0001C22AB0,UniRef:UniRef100_A0A061YDX0,UniRef:UniRef50_P16437,UniRef:UniRef90_P0ABW9
contig_1	Pyrodigal	gene	1076157	1076561	.	+	.	ID=GCA000010485_01040_gene;locus_tag=GCA000010485_01040;gene=flgC
contig_1	Pyrodigal	CDS	1076157	1076561	.	+	0	ID=GCA000010485_01040;Name=flagellar basal body rod protein FlgC;locus_tag=GCA000010485_01040;product=flagellar basal body rod protein FlgC;Dbxref=GO:0006935,GO:0009288,GO:0030694,GO:0071973,GO:0071978;gene=flgC;Parent=GCA000010485_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1558,COG:N,RefSeq:WP_001196460.1,SO:0001217,UniParc:UPI000012A8FE,UniRef:UniRef100_P0ABX2,UniRef:UniRef50_P0ABX2,UniRef:UniRef90_P0ABX2
contig_1	Pyrodigal	gene	1076573	1077268	.	+	.	ID=GCA000010485_01041_gene;locus_tag=GCA000010485_01041;gene=flgD
contig_1	Pyrodigal	CDS	1076573	1077268	.	+	0	ID=GCA000010485_01041;Name=flagellar hook assembly protein FlgD;locus_tag=GCA000010485_01041;product=flagellar hook assembly protein FlgD;Dbxref=GO:0005829,GO:0044781;gene=flgD;Parent=GCA000010485_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1843,COG:N,RefSeq:WP_000020484.1,SO:0001217,UniParc:UPI00000D090F,UniRef:UniRef100_C3TE72,UniRef:UniRef50_P75936,UniRef:UniRef90_P75936
contig_1	Pyrodigal	gene	1077293	1078498	.	+	.	ID=GCA000010485_01042_gene;locus_tag=GCA000010485_01042;gene=flgE
contig_1	Pyrodigal	CDS	1077293	1078498	.	+	0	ID=GCA000010485_01042;Name=flagellar hook protein FlgE;locus_tag=GCA000010485_01042;product=flagellar hook protein FlgE;Dbxref=GO:0005829,GO:0009288,GO:0009424,GO:0009425,GO:0071978;gene=flgE;Parent=GCA000010485_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000885873,COG:COG1749,COG:N,RefSeq:WP_000885885.1,SO:0001217,UniParc:UPI0001C22AB1,UniRef:UniRef100_A0A066SNC5,UniRef:UniRef50_P75937,UniRef:UniRef90_P75937
contig_1	Pyrodigal	gene	1078518	1079273	.	+	.	ID=GCA000010485_01043_gene;locus_tag=GCA000010485_01043;gene=flgF
contig_1	Pyrodigal	CDS	1078518	1079273	.	+	0	ID=GCA000010485_01043;Name=flagellar basal-body rod protein FlgF;locus_tag=GCA000010485_01043;product=flagellar basal-body rod protein FlgF;Dbxref=GO:0006935,GO:0009288,GO:0030694,GO:0071973,GO:0071978;gene=flgF;Parent=GCA000010485_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000349316,RefSeq:WP_000349340.1,SO:0001217,UniParc:UPI000191E5A9,UniRef:UniRef100_E2QKG1,UniRef:UniRef50_P75938,UniRef:UniRef90_P75938
contig_1	Pyrodigal	gene	1079445	1080227	.	+	.	ID=GCA000010485_01044_gene;locus_tag=GCA000010485_01044;gene=flgG
contig_1	Pyrodigal	CDS	1079445	1080227	.	+	0	ID=GCA000010485_01044;Name=flagellar basal-body rod protein FlgG;locus_tag=GCA000010485_01044;product=flagellar basal-body rod protein FlgG;Dbxref=GO:0009288,GO:0009426,GO:0071973,GO:0071978;gene=flgG;Parent=GCA000010485_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4786,COG:N,RefSeq:WP_000625837.1,SO:0001217,UniParc:UPI000012A918,UniRef:UniRef100_P0ABX5,UniRef:UniRef50_P0ABX5,UniRef:UniRef90_P0ABX5
contig_1	Pyrodigal	gene	1080281	1080979	.	+	.	ID=GCA000010485_01045_gene;locus_tag=GCA000010485_01045;gene=flgH
contig_1	Pyrodigal	CDS	1080281	1080979	.	+	0	ID=GCA000010485_01045;Name=flagellar basal body L-ring protein FlgH;locus_tag=GCA000010485_01045;product=flagellar basal body L-ring protein FlgH;Dbxref=GO:0003774,GO:0009279,GO:0009427,GO:0071973;gene=flgH;Parent=GCA000010485_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2063,COG:N,KEGG:K02393,RefSeq:WP_001295960.1,SO:0001217,UniParc:UPI0001C22AB2,UniRef:UniRef100_A0A061YHE6,UniRef:UniRef50_P0A1N8,UniRef:UniRef90_P0A1N8
contig_1	Pyrodigal	gene	1080991	1082088	.	+	.	ID=GCA000010485_01046_gene;locus_tag=GCA000010485_01046;gene=flgI
contig_1	Pyrodigal	CDS	1080991	1082088	.	+	0	ID=GCA000010485_01046;Name=flagellar basal body P-ring protein FlgI;locus_tag=GCA000010485_01046;product=flagellar basal body P-ring protein FlgI;Dbxref=GO:0005198,GO:0009428,GO:0030288,GO:0071973;gene=flgI;Parent=GCA000010485_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000589326,COG:COG1706,COG:N,KEGG:K02394,RefSeq:WP_000589326.1,SO:0001217,UniParc:UPI000012A92F,UniRef:UniRef100_P0A6S3,UniRef:UniRef50_P0A6S3,UniRef:UniRef90_P0A6S3
contig_1	Pyrodigal	gene	1082088	1083029	.	+	.	ID=GCA000010485_01047_gene;locus_tag=GCA000010485_01047;gene=flgJ
contig_1	Pyrodigal	CDS	1082088	1083029	.	+	0	ID=GCA000010485_01047;Name=flagellar assembly peptidoglycan hydrolase FlgJ;locus_tag=GCA000010485_01047;product=flagellar assembly peptidoglycan hydrolase FlgJ;Dbxref=GO:0004040,GO:0016798,GO:0042597,GO:0044780,GO:0071555,GO:0071973;gene=flgJ;Parent=GCA000010485_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3951,COG:N,RefSeq:WP_001295961.1,SO:0001217,UniParc:UPI0001C22AB3,UniRef:UniRef100_A0A066SNC2,UniRef:UniRef50_P75942,UniRef:UniRef90_P75942;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	1083095	1084738	.	+	.	ID=GCA000010485_01048_gene;locus_tag=GCA000010485_01048;gene=flgK
contig_1	Pyrodigal	CDS	1083095	1084738	.	+	0	ID=GCA000010485_01048;Name=flagellar hook-associated protein FlgK;locus_tag=GCA000010485_01048;product=flagellar hook-associated protein FlgK;Dbxref=GO:0005198,GO:0005576,GO:0009424,GO:0044780;gene=flgK;Parent=GCA000010485_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000096483.1,SO:0001217,UniParc:UPI0001C22AB4,UniRef:UniRef100_A0A066SNK8,UniRef:UniRef50_P0A1J5,UniRef:UniRef90_P33235
contig_1	Pyrodigal	gene	1084750	1085703	.	+	.	ID=GCA000010485_01049_gene;locus_tag=GCA000010485_01049;gene=flgL
contig_1	Pyrodigal	CDS	1084750	1085703	.	+	0	ID=GCA000010485_01049;Name=flagellar hook-associated protein FlgL;locus_tag=GCA000010485_01049;product=flagellar hook-associated protein FlgL;Dbxref=GO:0001539,GO:0005198,GO:0005576,GO:0009424,GO:0071973;gene=flgL;Parent=GCA000010485_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02397,RefSeq:WP_001212762.1,SO:0001217,UniParc:UPI00018872B2,UniRef:UniRef100_A0A061YDX8,UniRef:UniRef50_P29744,UniRef:UniRef90_P29744
contig_1	Pyrodigal	gene	1085898	1089083	.	-	.	ID=GCA000010485_01050_gene;locus_tag=GCA000010485_01050;gene=rne
contig_1	Pyrodigal	CDS	1085898	1089083	.	-	0	ID=GCA000010485_01050;Name=ribonuclease E;locus_tag=GCA000010485_01050;product=ribonuclease E;Dbxref=GO:0000049,GO:0000287,GO:0000967,GO:0003723,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0008033,GO:0008270,GO:0008312,GO:0008995,GO:0009898,GO:0016020,GO:0017151,GO:0019843,GO:0042802,GO:0051259,GO:0051289,GO:0060090,GO:1902280,GO:1902555,GO:1990061;gene=rne;Parent=GCA000010485_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,KEGG:K08300,RefSeq:WP_000827406.1,SO:0001217,UniParc:UPI0001C22AB5,UniRef:UniRef100_A0A066SW99,UniRef:UniRef50_P21513,UniRef:UniRef90_P21513;ec_number=3.1.26.12
contig_1	Infernal	regulatory_region	1089108	1089444	5e-35	-	.	ID=EFPPCJGBKI_282;Name=RNase E 5' UTR element;product=RNase E 5' UTR element;Dbxref=RFAM:RF00040;inference=profile:Rfam:RF00040;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	1089656	1090615	.	+	.	ID=GCA000010485_01051_gene;locus_tag=GCA000010485_01051;gene=rluC
contig_1	Pyrodigal	CDS	1089656	1090615	.	+	0	ID=GCA000010485_01051;Name=23S rRNA pseudouridine(955/2504/2580) synthase RluC;locus_tag=GCA000010485_01051;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0009982,GO:0160141;gene=rluC;Parent=GCA000010485_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06179,RefSeq:WP_000846342.1,SO:0001217,UniParc:UPI00000D0920,UniRef:UniRef100_Q8X8J3,UniRef:UniRef50_P0AA39,UniRef:UniRef90_P0AA39;ec_number=5.4.99.24
contig_1	Pyrodigal	gene	1090727	1091350	.	-	.	ID=GCA000010485_01052_gene;locus_tag=GCA000010485_01052;gene=yceF
contig_1	Pyrodigal	CDS	1090727	1091350	.	-	0	ID=GCA000010485_01052;Name=7-methyl-GTP pyrophosphatase;locus_tag=GCA000010485_01052;product=7-methyl-GTP pyrophosphatase;Dbxref=GO:0005737,GO:0009117,GO:0047429;gene=yceF;Parent=GCA000010485_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001125202,KEGG:K25422,SO:0001217,UniParc:UPI0002185A38,UniRef:UniRef100_A0A061YI40,UniRef:UniRef50_P0A729,UniRef:UniRef90_P0A729;ec_number=3.6.1.-
contig_1	Infernal	gene	1091305	1091473	.	+	.	ID=GCA000010485_01053_gene;locus_tag=GCA000010485_01053;gene=sraB
contig_1	Infernal	ncRNA	1091305	1091473	7.8e-33	+	.	ID=GCA000010485_01053;Name=SraB RNA;locus_tag=GCA000010485_01053;gene=sraB;product=SraB RNA;Dbxref=RFAM:RF00077;Parent=GCA000010485_01053_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00077
contig_1	Pyrodigal	gene	1091510	1092031	.	+	.	ID=GCA000010485_01054_gene;locus_tag=GCA000010485_01054;gene=yceD
contig_1	Pyrodigal	CDS	1091510	1092031	.	+	0	ID=GCA000010485_01054;Name=23S rRNA accumulation protein YceD;locus_tag=GCA000010485_01054;product=23S rRNA accumulation protein YceD;Dbxref=GO:0005829,GO:0042254;gene=yceD;Parent=GCA000010485_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_001174481.1,SO:0001217,UniParc:UPI000013A605,UniRef:UniRef100_P0AB28,UniRef:UniRef50_P0AB28,UniRef:UniRef90_P0AB28
contig_1	Pyrodigal	gene	1092083	1092256	.	+	.	ID=GCA000010485_01055_gene;locus_tag=GCA000010485_01055;gene=rpmF
contig_1	Pyrodigal	CDS	1092083	1092256	.	+	0	ID=GCA000010485_01055;Name=50S ribosomal protein L32;locus_tag=GCA000010485_01055;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000010485_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_000290727.1,SO:0001217,UniParc:UPI0000059FA0,UniRef:UniRef100_P0A7N4,UniRef:UniRef50_P0A7N4,UniRef:UniRef90_P0A7N4
contig_1	Pyrodigal	gene	1092367	1093407	.	+	.	ID=GCA000010485_01056_gene;locus_tag=GCA000010485_01056;gene=plsX
contig_1	Pyrodigal	CDS	1092367	1093407	.	+	0	ID=GCA000010485_01056;Name=phosphate acyltransferase PlsX;locus_tag=GCA000010485_01056;product=phosphate acyltransferase PlsX;Dbxref=GO:0005737,GO:0006633,GO:0008610,GO:0008654,GO:0043811;gene=plsX;Parent=GCA000010485_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0416,COG:I,KEGG:K03621,RefSeq:WP_001295964.1,SO:0001217,UniParc:UPI000016541F,UniRef:UniRef100_A7ZKJ3,UniRef:UniRef50_P27247,UniRef:UniRef90_P27247;ec_number=2.3.1.274
contig_1	Pyrodigal	gene	1093475	1094428	.	+	.	ID=GCA000010485_01057_gene;locus_tag=GCA000010485_01057;gene=fabH
contig_1	Pyrodigal	CDS	1093475	1094428	.	+	0	ID=GCA000010485_01057;Name=beta-ketoacyl-ACP synthase III;locus_tag=GCA000010485_01057;product=beta-ketoacyl-ACP synthase III;Dbxref=GO:0004315,GO:0005737,GO:0006633,GO:0033818;gene=fabH;Parent=GCA000010485_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000288132,BlastRules:WP_001100539,BlastRules:WP_003232971,COG:COG0332,COG:I,RefSeq:WP_000288138.1,SO:0001217,UniParc:UPI0001825CFE,UniRef:UniRef100_A0A066SNJ4,UniRef:UniRef50_P0A6R0,UniRef:UniRef90_P0A6R0;ec_number=2.3.1.180
contig_1	Pyrodigal	gene	1094444	1095373	.	+	.	ID=GCA000010485_01058_gene;locus_tag=GCA000010485_01058;gene=fabD
contig_1	Pyrodigal	CDS	1094444	1095373	.	+	0	ID=GCA000010485_01058;Name=ACP S-malonyltransferase;locus_tag=GCA000010485_01058;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0005829,GO:0006633;gene=fabD;Parent=GCA000010485_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000191343,COG:COG0331,COG:I,RefSeq:WP_000191372.1,SO:0001217,UniParc:UPI0000112664,UniRef:UniRef100_P0AAI9,UniRef:UniRef50_P0AAI9,UniRef:UniRef90_P0AAI9;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	1095386	1096120	.	+	.	ID=GCA000010485_01059_gene;locus_tag=GCA000010485_01059;gene=fabG
contig_1	Pyrodigal	CDS	1095386	1096120	.	+	0	ID=GCA000010485_01059;Name=3-oxoacyl-ACP reductase FabG;locus_tag=GCA000010485_01059;product=3-oxoacyl-ACP reductase FabG;Dbxref=GO:0004316,GO:0006633,GO:0030497,GO:0046872,GO:0050661,GO:0051287;gene=fabG;Parent=GCA000010485_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001008535.1,SO:0001217,UniParc:UPI000011309E,UniRef:UniRef100_P0AEK2,UniRef:UniRef50_P0AEK2,UniRef:UniRef90_P0AEK2;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1096331	1096567	.	+	.	ID=GCA000010485_01060_gene;locus_tag=GCA000010485_01060;gene=ptsG
contig_1	Pyrodigal	CDS	1096331	1096567	.	+	0	ID=GCA000010485_01060;Name=PTS glucose transporter subunit IIBC;locus_tag=GCA000010485_01060;product=PTS glucose transporter subunit IIBC;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0008982,GO:0009245,GO:0009401,GO:0016020,GO:0055056,GO:1904659;gene=ptsG;Parent=GCA000010485_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,KEGG:K07082,RefSeq:WP_000103754.1,SO:0001217,UniParc:UPI0000059F9B,UniRef:UniRef100_P0A6A8,UniRef:UniRef50_P0A6A8,UniRef:UniRef90_P0A6A8;ec_number=4.2.2.29
contig_1	Pyrodigal	gene	1096655	1097896	.	+	.	ID=GCA000010485_01061_gene;locus_tag=GCA000010485_01061;gene=fabF
contig_1	Pyrodigal	CDS	1096655	1097896	.	+	0	ID=GCA000010485_01061;Name=beta-ketoacyl-ACP synthase II;locus_tag=GCA000010485_01061;product=beta-ketoacyl-ACP synthase II;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabF;Parent=GCA000010485_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_000044679.1,SO:0001217,UniParc:UPI00001639A4,UniRef:UniRef100_P0AAI5,UniRef:UniRef50_P0AAI5,UniRef:UniRef90_P0AAI5;ec_number=2.3.1.179
contig_1	Pyrodigal	gene	1098016	1098825	.	+	.	ID=GCA000010485_01062_gene;locus_tag=GCA000010485_01062;gene=pabC
contig_1	Pyrodigal	CDS	1098016	1098825	.	+	0	ID=GCA000010485_01062;Name=aminodeoxychorismate lyase;locus_tag=GCA000010485_01062;product=aminodeoxychorismate lyase;Dbxref=GO:0005829,GO:0008153,GO:0008696,GO:0030170,GO:0046654,GO:0046656;gene=pabC;Parent=GCA000010485_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_000478684.1,SO:0001217,UniParc:UPI0000D50844,UniRef:UniRef100_A0A066SNI3,UniRef:UniRef50_P28305,UniRef:UniRef90_P28305;ec_number=4.1.3.38
contig_1	Pyrodigal	gene	1098828	1099850	.	+	.	ID=GCA000010485_01063_gene;locus_tag=GCA000010485_01063;gene=yceG
contig_1	Pyrodigal	CDS	1098828	1099850	.	+	0	ID=GCA000010485_01063;Name=cell division protein YceG;locus_tag=GCA000010485_01063;product=cell division protein YceG;Dbxref=GO:0000270,GO:0005886,GO:0008932,GO:0009252,GO:0030288,GO:0071555;gene=yceG;Parent=GCA000010485_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1559,COG:M,RefSeq:WP_000756838.1,SO:0001217,UniParc:UPI00005AA5EC,UniRef:UniRef100_E2QKI1,UniRef:UniRef50_P28306,UniRef:UniRef90_P28306;ec_number=4.2.2.29
contig_1	Pyrodigal	gene	1099840	1100481	.	+	.	ID=GCA000010485_01064_gene;locus_tag=GCA000010485_01064;gene=tmk
contig_1	Pyrodigal	CDS	1099840	1100481	.	+	0	ID=GCA000010485_01064;Name=dTMP kinase;locus_tag=GCA000010485_01064;product=dTMP kinase;Dbxref=GO:0004798,GO:0005524,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=tmk;Parent=GCA000010485_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,KEGG:K00943,RefSeq:WP_001257002.1,SO:0001217,UniParc:UPI00005EFDBA,UniRef:UniRef100_B7UPB4,UniRef:UniRef50_O69169,UniRef:UniRef90_Q8X8H6;ec_number=2.7.4.9
contig_1	Pyrodigal	gene	1100478	1101482	.	+	.	ID=GCA000010485_01065_gene;locus_tag=GCA000010485_01065;gene=holB
contig_1	Pyrodigal	CDS	1100478	1101482	.	+	0	ID=GCA000010485_01065;Name=DNA polymerase III subunit delta';locus_tag=GCA000010485_01065;product=DNA polymerase III subunit delta';Dbxref=GO:0003677,GO:0003689,GO:0003887,GO:0006260,GO:0006261,GO:0008408,GO:0009360,GO:0030894,GO:0043846;gene=holB;Parent=GCA000010485_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0470,COG:L,RefSeq:WP_001267919.1,SO:0001217,UniParc:UPI0001C22AE2,UniRef:UniRef100_A0A066SS68,UniRef:UniRef50_P28631,UniRef:UniRef90_P28631;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1101493	1102290	.	+	.	ID=GCA000010485_01066_gene;locus_tag=GCA000010485_01066;gene=ycfH
contig_1	Pyrodigal	CDS	1101493	1102290	.	+	0	ID=GCA000010485_01066;Name=metal-dependent hydrolase;locus_tag=GCA000010485_01066;product=metal-dependent hydrolase;Dbxref=GO:0004536,GO:0005829,GO:0016788,GO:0046872;gene=ycfH;Parent=GCA000010485_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_000480245.1,SO:0001217,UniParc:UPI000013A679,UniRef:UniRef100_P0AFQ7,UniRef:UniRef50_P0AFQ7,UniRef:UniRef90_P0AFQ7;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1102585	1104018	.	+	.	ID=GCA000010485_01067_gene;locus_tag=GCA000010485_01067;gene=ptsG
contig_1	Pyrodigal	CDS	1102585	1104018	.	+	0	ID=GCA000010485_01067;Name=PTS glucose transporter subunit IIBC;locus_tag=GCA000010485_01067;product=PTS glucose transporter subunit IIBC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090564,GO:1904659;gene=ptsG;Parent=GCA000010485_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000475726.1,SO:0001217,UniParc:UPI0001C22AE3,UniRef:UniRef100_A0A066SNF9,UniRef:UniRef50_P69786,UniRef:UniRef90_P69786;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	1104078	1106267	.	-	.	ID=GCA000010485_01068_gene;locus_tag=GCA000010485_01068;gene=fhuE
contig_1	Pyrodigal	CDS	1104078	1106267	.	-	0	ID=GCA000010485_01068;Name=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;locus_tag=GCA000010485_01068;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;Dbxref=GO:0009279,GO:0015344,GO:0015891,GO:0038023;gene=fhuE;Parent=GCA000010485_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16088,RefSeq:WP_000953405.1,SO:0001217,UniParc:UPI0001C22AE4,UniRef:UniRef100_A0A7I0L0T5,UniRef:UniRef50_P16869,UniRef:UniRef90_A0AAN3LGR8
contig_1	Pyrodigal	gene	1106601	1106960	.	+	.	ID=GCA000010485_01069_gene;locus_tag=GCA000010485_01069;gene=hinT
contig_1	Pyrodigal	CDS	1106601	1106960	.	+	0	ID=GCA000010485_01069;Name=purine nucleoside phosphoramidase;locus_tag=GCA000010485_01069;product=purine nucleoside phosphoramidase;Dbxref=GO:0000166,GO:0016787;gene=hinT;Parent=GCA000010485_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_000807125.1,SO:0001217,UniParc:UPI000013A677,UniRef:UniRef100_P0ACE7,UniRef:UniRef50_P0ACE7,UniRef:UniRef90_P0ACE7;ec_number=3.9.1.-
contig_1	Pyrodigal	gene	1106963	1107340	.	+	.	ID=GCA000010485_01070_gene;locus_tag=GCA000010485_01070;gene=ycfL
contig_1	Pyrodigal	CDS	1106963	1107340	.	+	0	ID=GCA000010485_01070;Name=Lipoprotein;locus_tag=GCA000010485_01070;product=Lipoprotein;gene=ycfL;Parent=GCA000010485_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5633,COG:S,RefSeq:WP_001225291.1,SO:0001217,UniParc:UPI00018880FA,UniRef:UniRef100_A0A0A2RWZ3,UniRef:UniRef50_P75946,UniRef:UniRef90_Q32EW4
contig_1	Pyrodigal	gene	1107354	1107995	.	+	.	ID=GCA000010485_01071_gene;locus_tag=GCA000010485_01071;gene=lpoB
contig_1	Pyrodigal	CDS	1107354	1107995	.	+	0	ID=GCA000010485_01071;Name=penicillin-binding protein activator LpoB;locus_tag=GCA000010485_01071;product=penicillin-binding protein activator LpoB;Dbxref=GO:0008360,GO:0009252,GO:0030234,GO:0031241;gene=lpoB;Parent=GCA000010485_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3417,COG:M,KEGG:K07337,RefSeq:WP_000164453.1,SO:0001217,UniParc:UPI0002185A4B,UniRef:UniRef100_A0A061YHG5,UniRef:UniRef50_P0AB38,UniRef:UniRef90_P0AB38
contig_1	Pyrodigal	gene	1107976	1108800	.	+	.	ID=GCA000010485_01072_gene;locus_tag=GCA000010485_01072;gene=thiK
contig_1	Pyrodigal	CDS	1107976	1108800	.	+	0	ID=GCA000010485_01072;Name=thiamine kinase;locus_tag=GCA000010485_01072;product=thiamine kinase;Dbxref=GO:0005524,GO:0006772,GO:0009229,GO:0016310,GO:0019165;gene=thiK;Parent=GCA000010485_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0510,COG:H,KEGG:K07251,RefSeq:WP_001116601.1,SO:0001217,UniParc:UPI00000DEA1D,UniRef:UniRef100_Q8FIN3,UniRef:UniRef50_P75948,UniRef:UniRef90_P75948;ec_number=2.7.1.89
contig_1	Pyrodigal	gene	1108811	1109836	.	+	.	ID=GCA000010485_01073_gene;locus_tag=GCA000010485_01073;gene=nagZ
contig_1	Pyrodigal	CDS	1108811	1109836	.	+	0	ID=GCA000010485_01073;Name=beta-N-acetylhexosaminidase;locus_tag=GCA000010485_01073;product=beta-N-acetylhexosaminidase;Dbxref=GO:0004553,GO:0005737,GO:0005975,GO:0008360,GO:0009252,GO:0009254,GO:0016231,GO:0046677,GO:0051301,GO:0071555;gene=nagZ;Parent=GCA000010485_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000529298.1,SO:0001217,UniParc:UPI000176C09A,UniRef:UniRef100_B7UPC3,UniRef:UniRef50_P75949,UniRef:UniRef90_Q8ZQ06;ec_number=3.2.1.52
contig_1	Pyrodigal	gene	1109859	1110401	.	+	.	ID=GCA000010485_01074_gene;locus_tag=GCA000010485_01074;gene=ycfP
contig_1	Pyrodigal	CDS	1109859	1110401	.	+	0	ID=GCA000010485_01074;Name=alpha/beta hydrolase YcfP;locus_tag=GCA000010485_01074;product=alpha/beta hydrolase YcfP;Dbxref=GO:0005829;gene=ycfP;Parent=GCA000010485_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3150,COG:R,KEGG:K07000,RefSeq:WP_000587933.1,SO:0001217,UniParc:UPI000013A681,UniRef:UniRef100_P0A8E1,UniRef:UniRef50_P0A8E1,UniRef:UniRef90_P0A8E1
contig_1	Pyrodigal	gene	1110800	1112104	.	+	.	ID=GCA000010485_01075_gene;locus_tag=GCA000010485_01075;gene=ndh
contig_1	Pyrodigal	CDS	1110800	1112104	.	+	0	ID=GCA000010485_01075;Name=NADH-quinone dehydrogenase;locus_tag=GCA000010485_01075;product=NADH-quinone dehydrogenase;Dbxref=GO:0005886,GO:0008137,GO:0008823,GO:0009060,GO:0009061,GO:0019646,GO:0030964,GO:0050136,GO:0050660,GO:0055070;gene=ndh;Parent=GCA000010485_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000211045,COG:C,COG:COG1252,RefSeq:WP_001295966.1,SO:0001217,UniParc:UPI0000DACDDA,UniRef:UniRef100_E2QKJ3,UniRef:UniRef50_P00393,UniRef:UniRef90_P00393;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	1112331	1112870	.	+	.	ID=GCA000010485_01076_gene;locus_tag=GCA000010485_01076;gene=ycfJ
contig_1	Pyrodigal	CDS	1112331	1112870	.	+	0	ID=GCA000010485_01076;Name=putative protein YcfJ;locus_tag=GCA000010485_01076;product=putative protein YcfJ;Dbxref=GO:0019867;gene=ycfJ;Parent=GCA000010485_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3134,COG:S,KEGG:K06077,RefSeq:WP_001043459.1,SO:0001217,UniParc:UPI000013A67C,UniRef:UniRef100_P0AB35,UniRef:UniRef50_P0AB35,UniRef:UniRef90_P0AB35
contig_1	Pyrodigal	gene	1112932	1113564	.	-	.	ID=GCA000010485_01077_gene;locus_tag=GCA000010485_01077;gene=comR
contig_1	Pyrodigal	CDS	1112932	1113564	.	-	0	ID=GCA000010485_01077;Name=TetR family copper-responsive transcriptional repressor ComR;locus_tag=GCA000010485_01077;product=TetR family copper-responsive transcriptional repressor ComR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355,GO:0045892,GO:0046688;gene=comR;Parent=GCA000010485_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001336528,COG:COG1309,COG:K,KEGG:K22041,RefSeq:WP_001295967.1,SO:0001217,UniParc:UPI0002185A4C,UniRef:UniRef100_A0A066SWU8,UniRef:UniRef50_P75952,UniRef:UniRef90_P75952
contig_1	Pyrodigal	gene	1113805	1114062	.	+	.	ID=GCA000010485_01078_gene;locus_tag=GCA000010485_01078;gene=bhsA
contig_1	Pyrodigal	CDS	1113805	1114062	.	+	0	ID=GCA000010485_01078;Name=multiple stress resistance protein BhsA;locus_tag=GCA000010485_01078;product=multiple stress resistance protein BhsA;Dbxref=GO:0006950,GO:0009279,GO:0044010,GO:0046688;gene=bhsA;Parent=GCA000010485_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000800153,RefSeq:WP_000800153.1,SO:0001217,UniParc:UPI000013A683,UniRef:UniRef100_P0AB40,UniRef:UniRef50_P0AB40,UniRef:UniRef90_P0AB40
contig_1	Pyrodigal	gene	1114145	1115104	.	-	.	ID=GCA000010485_01079_gene;locus_tag=GCA000010485_01079;gene=ycfS
contig_1	Pyrodigal	CDS	1114145	1115104	.	-	0	ID=GCA000010485_01079;Name=L%2CD-transpeptidase LdtC;locus_tag=GCA000010485_01079;product=L%2CD-transpeptidase LdtC;Dbxref=GO:0008360,GO:0016757,GO:0018104,GO:0042597,GO:0071555,GO:0071972;gene=ycfS;Parent=GCA000010485_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001350500,COG:COG1376,COG:M,KEGG:K19236,RefSeq:WP_000598225.1,SO:0001217,UniParc:UPI000191E67B,UniRef:UniRef100_E2QKJ7,UniRef:UniRef50_P75954,UniRef:UniRef90_P75954;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	1115250	1118768	.	-	.	ID=GCA000010485_01080_gene;locus_tag=GCA000010485_01080;gene=mfd
contig_1	Pyrodigal	CDS	1115250	1118768	.	-	0	ID=GCA000010485_01080;Name=transcription-repair coupling factor;locus_tag=GCA000010485_01080;product=transcription-repair coupling factor;Dbxref=GO:0000716,GO:0003676,GO:0003677,GO:0003684,GO:0005524,GO:0005829,GO:0006281,GO:0006283,GO:0006294,GO:0006355,GO:0006974,GO:0015616,GO:0016787,GO:0043175,GO:1990391;gene=mfd;Parent=GCA000010485_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1197,COG:LK,KEGG:K03723,SO:0001217,UniParc:UPI0002A3018B,UniRef:UniRef100_A0A061L1M6,UniRef:UniRef50_P30958,UniRef:UniRef90_P30958;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1118823	1119896	.	-	.	ID=GCA000010485_01081_gene;locus_tag=GCA000010485_01081;gene=ycfT
contig_1	Pyrodigal	CDS	1118823	1119896	.	-	0	ID=GCA000010485_01081;Name=Inner membrane protein YcfT;locus_tag=GCA000010485_01081;product=Inner membrane protein YcfT;Dbxref=GO:0005886,GO:0009246,GO:0016413;gene=ycfT;Parent=GCA000010485_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4763,COG:S,RefSeq:WP_000810241.1,SO:0001217,UniParc:UPI0001C22AE9,UniRef:UniRef100_A0A061Y8D4,UniRef:UniRef50_P75955,UniRef:UniRef90_P75955
contig_1	Pyrodigal	gene	1120157	1121356	.	+	.	ID=GCA000010485_01082_gene;locus_tag=GCA000010485_01082;gene=lolC
contig_1	Pyrodigal	CDS	1120157	1121356	.	+	0	ID=GCA000010485_01082;Name=lipoprotein-releasing ABC transporter permease subunit LolC;locus_tag=GCA000010485_01082;product=lipoprotein-releasing ABC transporter permease subunit LolC;Dbxref=GO:0005886,GO:0016020,GO:0030288,GO:0042953,GO:0043190,GO:0044874,GO:0089705,GO:0098797,GO:0140306;gene=lolC;Parent=GCA000010485_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_000284714.1,SO:0001217,UniParc:UPI000012E7CE,UniRef:UniRef100_P0ADC3,UniRef:UniRef50_P0ADC3,UniRef:UniRef90_P0ADC3
contig_1	Pyrodigal	gene	1121349	1122050	.	+	.	ID=GCA000010485_01083_gene;locus_tag=GCA000010485_01083;gene=lolD
contig_1	Pyrodigal	CDS	1121349	1122050	.	+	0	ID=GCA000010485_01083;Name=lipoprotein-releasing ABC transporter ATP-binding protein LolD;locus_tag=GCA000010485_01083;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0022857,GO:0042953,GO:0044874,GO:0089705;gene=lolD;Parent=GCA000010485_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_001033695.1,SO:0001217,UniParc:UPI00000DEA23,UniRef:UniRef100_Q8FIM7,UniRef:UniRef50_P75957,UniRef:UniRef90_P75957;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1122056	1123294	.	+	.	ID=GCA000010485_01084_gene;locus_tag=GCA000010485_01084;gene=lolE
contig_1	Pyrodigal	CDS	1122056	1123294	.	+	0	ID=GCA000010485_01084;Name=lipoprotein-releasing ABC transporter permease subunit LolE;locus_tag=GCA000010485_01084;product=lipoprotein-releasing ABC transporter permease subunit LolE;Dbxref=GO:0005886,GO:0042953,GO:0043190,GO:0044874,GO:0098797,GO:0140306;gene=lolE;Parent=GCA000010485_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,SO:0001217,UniParc:UPI00025C7143,UniRef:UniRef100_A0A061YFS2,UniRef:UniRef50_P75958,UniRef:UniRef90_P75958
contig_1	Pyrodigal	gene	1123323	1124234	.	+	.	ID=GCA000010485_01085_gene;locus_tag=GCA000010485_01085;gene=nagK
contig_1	Pyrodigal	CDS	1123323	1124234	.	+	0	ID=GCA000010485_01085;Name=N-acetylglucosamine kinase;locus_tag=GCA000010485_01085;product=N-acetylglucosamine kinase;Dbxref=GO:0005524,GO:0006044,GO:0008270,GO:0009254,GO:0045127;gene=nagK;Parent=GCA000010485_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000291272.1,SO:0001217,UniParc:UPI0001C22AEA,UniRef:UniRef100_A0A061L1N0,UniRef:UniRef50_P75959,UniRef:UniRef90_P75959;ec_number=2.7.1.59
contig_1	Pyrodigal	gene	1124250	1125071	.	+	.	ID=GCA000010485_01086_gene;locus_tag=GCA000010485_01086;gene=cobB
contig_1	Pyrodigal	CDS	1124250	1125071	.	+	0	ID=GCA000010485_01086;Name=Sir2 family NAD+-dependent deacetylase;locus_tag=GCA000010485_01086;product=Sir2 family NAD+-dependent deacetylase;Dbxref=GO:0005737,GO:0008270,GO:0032041,GO:0036054,GO:0036055,GO:0046969,GO:0046970,GO:0070403,GO:0097372,GO:0140765,GO:0141222,GO:0160013;gene=cobB;Parent=GCA000010485_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_000952746.1,SO:0001217,UniParc:UPI00000DEA26,UniRef:UniRef100_Q8FIM4,UniRef:UniRef50_P75960,UniRef:UniRef90_P75960;ec_number=2.3.1.286
contig_1	Pyrodigal	gene	1125209	1125997	.	-	.	ID=GCA000010485_01087_gene;locus_tag=GCA000010485_01087
contig_1	Pyrodigal	CDS	1125209	1125997	.	-	0	ID=GCA000010485_01087;Name=TPM domain-containing protein;locus_tag=GCA000010485_01087;product=TPM domain-containing protein;Parent=GCA000010485_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000720214.1,SO:0001217,UniParc:UPI0001C22AEB,UniRef:UniRef100_UPI0001C22AEB,UniRef:UniRef50_P75961,UniRef:UniRef90_B7NAZ9
contig_1	Pyrodigal	gene	1125994	1126455	.	-	.	ID=GCA000010485_01088_gene;locus_tag=GCA000010485_01088
contig_1	Pyrodigal	CDS	1125994	1126455	.	-	0	ID=GCA000010485_01088;Name=DUF3592 domain-containing protein;locus_tag=GCA000010485_01088;product=DUF3592 domain-containing protein;Parent=GCA000010485_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295970.1,SO:0001217,UniParc:UPI0002185A4E,UniRef:UniRef100_A0A061YEM2,UniRef:UniRef50_P75962,UniRef:UniRef90_B7LQ13
contig_1	Pyrodigal	gene	1126513	1127559	.	-	.	ID=GCA000010485_01089_gene;locus_tag=GCA000010485_01089;gene=potD
contig_1	Pyrodigal	CDS	1126513	1127559	.	-	0	ID=GCA000010485_01089;Name=spermidine/putrescine ABC transporter substrate-binding protein PotD;locus_tag=GCA000010485_01089;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;Dbxref=GO:0015846,GO:0019808,GO:0030288,GO:0042597;gene=potD;Parent=GCA000010485_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_000759309.1,SO:0001217,UniParc:UPI00005EF07D,UniRef:UniRef100_A0A023KW13,UniRef:UniRef50_P0AFK9,UniRef:UniRef90_P0AFK9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1127556	1128350	.	-	.	ID=GCA000010485_01090_gene;locus_tag=GCA000010485_01090;gene=potC
contig_1	Pyrodigal	CDS	1127556	1128350	.	-	0	ID=GCA000010485_01090;Name=spermidine/putrescine ABC transporter permease PotC;locus_tag=GCA000010485_01090;product=spermidine/putrescine ABC transporter permease PotC;Dbxref=GO:0005886,GO:0055085;gene=potC;Parent=GCA000010485_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_000580316.1,SO:0001217,UniParc:UPI0000131F96,UniRef:UniRef100_P0AFK6,UniRef:UniRef50_P0AFK6,UniRef:UniRef90_P0AFK6;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1128347	1129204	.	-	.	ID=GCA000010485_01091_gene;locus_tag=GCA000010485_01091;gene=potB
contig_1	Pyrodigal	CDS	1128347	1129204	.	-	0	ID=GCA000010485_01091;Name=spermidine/putrescine ABC transporter permease PotB;locus_tag=GCA000010485_01091;product=spermidine/putrescine ABC transporter permease PotB;Dbxref=GO:0005886,GO:0016020,GO:0055085;gene=potB;Parent=GCA000010485_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_000799401.1,SO:0001217,UniParc:UPI00001639A8,UniRef:UniRef100_A0A037Y861,UniRef:UniRef50_P0AFK4,UniRef:UniRef90_P0AFK4;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1129188	1130324	.	-	.	ID=GCA000010485_01092_gene;locus_tag=GCA000010485_01092;gene=potA
contig_1	Pyrodigal	CDS	1129188	1130324	.	-	0	ID=GCA000010485_01092;Name=spermidine/putrescine ABC transporter ATP-binding protein PotA;locus_tag=GCA000010485_01092;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015594,GO:0015846,GO:0016020,GO:0016887,GO:0022857,GO:0043190;gene=potA;Parent=GCA000010485_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000531594.1,SO:0001217,UniParc:UPI0000131F8D,UniRef:UniRef100_P69874,UniRef:UniRef50_P69874,UniRef:UniRef90_P69874;ec_number=7.6.2.11
contig_1	Pyrodigal	gene	1130574	1131800	.	+	.	ID=GCA000010485_01093_gene;locus_tag=GCA000010485_01093;gene=pepT
contig_1	Pyrodigal	CDS	1130574	1131800	.	+	0	ID=GCA000010485_01093;Name=peptidase T;locus_tag=GCA000010485_01093;product=peptidase T;Dbxref=GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0043171,GO:0045148;gene=pepT;Parent=GCA000010485_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000359446.1,SO:0001217,UniParc:UPI00001315FD,UniRef:UniRef100_B7UQ36,UniRef:UniRef50_P26311,UniRef:UniRef90_P26311;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	1131849	1132970	.	-	.	ID=GCA000010485_01094_gene;locus_tag=GCA000010485_01094;gene=roxA
contig_1	Pyrodigal	CDS	1131849	1132970	.	-	0	ID=GCA000010485_01094;Name=[50S ribosomal protein L16]-arginine 3-hydroxylase;locus_tag=GCA000010485_01094;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;gene=roxA;Parent=GCA000010485_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000456506,COG:COG2850,COG:J,RefSeq:WP_001295435.1,SO:0001217,UniParc:UPI00005EFA56,UniRef:UniRef100_E2QKL1,UniRef:UniRef50_A0A2B7LR00,UniRef:UniRef90_A0A2B7LR00;ec_number=1.14.11.47
contig_1	Pyrodigal	gene	1133046	1134506	.	-	.	ID=GCA000010485_01095_gene;locus_tag=GCA000010485_01095;gene=phoQ
contig_1	Pyrodigal	CDS	1133046	1134506	.	-	0	ID=GCA000010485_01095;Name=two-component system sensor histidine kinase PhoQ;locus_tag=GCA000010485_01095;product=two-component system sensor histidine kinase PhoQ;Dbxref=GO:0000155,GO:0000160,GO:0004673,GO:0004721,GO:0005524,GO:0005886,GO:0007165,GO:0007234,GO:0010350,GO:0016301,GO:0016772,GO:0042802,GO:0046872;gene=phoQ;Parent=GCA000010485_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07637,RefSeq:WP_000735412.1,SO:0001217,UniParc:UPI00001319CA,UniRef:UniRef100_P23837,UniRef:UniRef50_P23837,UniRef:UniRef90_P23837;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	1134506	1135177	.	-	.	ID=GCA000010485_01096_gene;locus_tag=GCA000010485_01096;gene=phoP
contig_1	Pyrodigal	CDS	1134506	1135177	.	-	0	ID=GCA000010485_01096;Name=two-component system response regulator PhoP;locus_tag=GCA000010485_01096;product=two-component system response regulator PhoP;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=phoP;Parent=GCA000010485_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001265481.1,SO:0001217,UniParc:UPI000000E0F8,UniRef:UniRef100_Q8CXZ9,UniRef:UniRef50_P23836,UniRef:UniRef90_P23836
contig_1	Pyrodigal	gene	1135346	1136716	.	-	.	ID=GCA000010485_01097_gene;locus_tag=GCA000010485_01097;gene=purB
contig_1	Pyrodigal	CDS	1135346	1136716	.	-	0	ID=GCA000010485_01097;Name=adenylosuccinate lyase;locus_tag=GCA000010485_01097;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0005829,GO:0006188,GO:0006189,GO:0006974,GO:0009152,GO:0044208,GO:0070626,GO:0097216;gene=purB;Parent=GCA000010485_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_000423736.1,SO:0001217,UniParc:UPI0001C228A2,UniRef:UniRef100_A0A066SWS6,UniRef:UniRef50_P0AB89,UniRef:UniRef90_P0AB89;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	1136720	1137361	.	-	.	ID=GCA000010485_01098_gene;locus_tag=GCA000010485_01098;gene=hflD
contig_1	Pyrodigal	CDS	1136720	1137361	.	-	0	ID=GCA000010485_01098;Name=high frequency lysogenization protein HflD;locus_tag=GCA000010485_01098;product=high frequency lysogenization protein HflD;Dbxref=GO:0005737,GO:0005886;gene=hflD;Parent=GCA000010485_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_024131182,COG:COG2915,COG:XT,KEGG:K07153,RefSeq:WP_001295971.1,SO:0001217,UniParc:UPI00001BBB7C,UniRef:UniRef100_B7UQ41,UniRef:UniRef50_P25746,UniRef:UniRef90_P25746
contig_1	Pyrodigal	gene	1137397	1138503	.	-	.	ID=GCA000010485_01099_gene;locus_tag=GCA000010485_01099;gene=mnmA
contig_1	Pyrodigal	CDS	1137397	1138503	.	-	0	ID=GCA000010485_01099;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000010485_01099;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0004808,GO:0005524,GO:0005737,GO:0006396,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000010485_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_001295972.1,SO:0001217,UniParc:UPI0001888313,UniRef:UniRef100_A0A023KWH6,UniRef:UniRef50_P25745,UniRef:UniRef90_P25745;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	1138557	1139018	.	-	.	ID=GCA000010485_01100_gene;locus_tag=GCA000010485_01100;gene=nudJ
contig_1	Pyrodigal	CDS	1138557	1139018	.	-	0	ID=GCA000010485_01100;Name=phosphatase NudJ;locus_tag=GCA000010485_01100;product=phosphatase NudJ;Dbxref=GO:0004787,GO:0017110,GO:0017111;gene=nudJ;Parent=GCA000010485_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000476093,COG:COG1051,COG:F,RefSeq:WP_000476093.1,SO:0001217,UniParc:UPI000013B9B0,UniRef:UniRef100_P0AEI6,UniRef:UniRef50_P0AEI6,UniRef:UniRef90_P0AEI6;ec_number=3.6.1.42
contig_1	Pyrodigal	gene	1139028	1139681	.	-	.	ID=GCA000010485_01101_gene;locus_tag=GCA000010485_01101;gene=rluE
contig_1	Pyrodigal	CDS	1139028	1139681	.	-	0	ID=GCA000010485_01101;Name=23S rRNA pseudouridine(2457) synthase RluE;locus_tag=GCA000010485_01101;product=23S rRNA pseudouridine(2457) synthase RluE;Dbxref=GO:0001522,GO:0003723,GO:0006364,GO:0009982,GO:0160137;gene=rluE;Parent=GCA000010485_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_001248677.1,SO:0001217,UniParc:UPI0001C228A4,UniRef:UniRef100_A0A061Y8A7,UniRef:UniRef50_P75966,UniRef:UniRef90_P75966;ec_number=5.4.99.20
contig_1	Pyrodigal	gene	1139853	1141103	.	+	.	ID=GCA000010485_01102_gene;locus_tag=GCA000010485_01102;gene=icd
contig_1	Pyrodigal	CDS	1139853	1141103	.	+	0	ID=GCA000010485_01102;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000010485_01102;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0005737,GO:0005829,GO:0006097,GO:0006099,GO:0006979,GO:0022900,GO:0051287,GO:0097216;gene=icd;Parent=GCA000010485_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,KEGG:K00031,RefSeq:WP_000444487.1,SO:0001217,UniParc:UPI000000E0FD,UniRef:UniRef100_Q93R41,UniRef:UniRef50_P08200,UniRef:UniRef90_P08200;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	1141217	1142359	.	-	.	ID=GCA000010485_01103_gene;locus_tag=GCA000010485_01103;gene=int
contig_1	Pyrodigal	CDS	1141217	1142359	.	-	0	ID=GCA000010485_01103;Name=Integrase;locus_tag=GCA000010485_01103;product=Integrase;Dbxref=GO:0003677,GO:0006310,GO:0008907,GO:0016740,GO:0016787,GO:0044826,GO:0046718,GO:0075713;gene=int;Parent=GCA000010485_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000741335.1,SO:0001217,UniParc:UPI0000D50857,UniRef:UniRef100_E2QKM0,UniRef:UniRef50_P75969,UniRef:UniRef90_P27077;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1142349	1142585	.	-	.	ID=GCA000010485_01104_gene;locus_tag=GCA000010485_01104;gene=xis
contig_1	Pyrodigal	CDS	1142349	1142585	.	-	0	ID=GCA000010485_01104;Name=Excisionase;locus_tag=GCA000010485_01104;product=Excisionase;Dbxref=GO:0003677,GO:0006310,GO:0032359;gene=xis;Parent=GCA000010485_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088653.1,SO:0001217,UniParc:UPI000011F512,UniRef:UniRef100_P27079,UniRef:UniRef50_P27079,UniRef:UniRef90_P27079
contig_1	Pyrodigal	gene	1142725	1142964	.	-	.	ID=GCA000010485_01105_gene;locus_tag=GCA000010485_01105
contig_1	Pyrodigal	CDS	1142725	1142964	.	-	0	ID=GCA000010485_01105;Name=Bacteriophage protein;locus_tag=GCA000010485_01105;product=Bacteriophage protein;Parent=GCA000010485_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000488406.1,SO:0001217,UniParc:UPI0000DACDE7,UniRef:UniRef100_A0A0D0NBC3,UniRef:UniRef50_A0A7U9DGB9,UniRef:UniRef90_A0A0D0NBC3
contig_1	Pyrodigal	gene	1143012	1143230	.	-	.	ID=GCA000010485_01106_gene;locus_tag=GCA000010485_01106
contig_1	Pyrodigal	CDS	1143012	1143230	.	-	0	ID=GCA000010485_01106;Name=Zinc finger DksA/TraR C4-type domain-containing protein;locus_tag=GCA000010485_01106;product=Zinc finger DksA/TraR C4-type domain-containing protein;Parent=GCA000010485_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000763364.1,SO:0001217,UniParc:UPI0000DACDE8,UniRef:UniRef100_A0A178SV14,UniRef:UniRef50_Q6H9Z4,UniRef:UniRef90_Q6H9Z4
contig_1	Pyrodigal	gene	1143237	1143326	.	-	.	ID=GCA000010485_01107_gene;locus_tag=GCA000010485_01107
contig_1	Pyrodigal	CDS	1143237	1143326	.	-	0	ID=GCA000010485_01107;Name=Phage protein;locus_tag=GCA000010485_01107;product=Phage protein;Parent=GCA000010485_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A2A97F,UniRef:UniRef100_A0A234G1S7,UniRef:UniRef50_A0A653FVH6,UniRef:UniRef90_A0A653FVH6
contig_1	Pyrodigal	gene	1143329	1143544	.	-	.	ID=GCA000010485_01108_gene;locus_tag=GCA000010485_01108;gene=zapA
contig_1	Pyrodigal	CDS	1143329	1143544	.	-	0	ID=GCA000010485_01108;Name=Cell division protein ZapA;locus_tag=GCA000010485_01108;product=Cell division protein ZapA;gene=zapA;Parent=GCA000010485_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000188880.1,SO:0001217,UniParc:UPI00005EFA59,UniRef:UniRef100_A0A2R9VZ96,UniRef:UniRef50_A0A765T713,UniRef:UniRef90_A0A765T713
contig_1	Pyrodigal	gene	1143621	1143770	.	-	.	ID=GCA000010485_01109_gene;locus_tag=GCA000010485_01109
contig_1	Pyrodigal	CDS	1143621	1143770	.	-	0	ID=GCA000010485_01109;Name=DUF1382 domain-containing protein;locus_tag=GCA000010485_01109;product=DUF1382 domain-containing protein;Parent=GCA000010485_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000951355.1,SO:0001217,UniParc:UPI0001F8DB64,UniRef:UniRef100_E2QKM5,UniRef:UniRef50_E2QKM5,UniRef:UniRef90_E2QKM5
contig_1	Pyrodigal	gene	1143785	1143967	.	-	.	ID=GCA000010485_01110_gene;locus_tag=GCA000010485_01110
contig_1	Pyrodigal	CDS	1143785	1143967	.	-	0	ID=GCA000010485_01110;Name=Phage protein;locus_tag=GCA000010485_01110;product=Phage protein;Parent=GCA000010485_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000149539.1,SO:0001217,UniParc:UPI0001F316B0,UniRef:UniRef100_A0A1Q6AWJ0,UniRef:UniRef50_A0A4C9ES99,UniRef:UniRef90_A0A836ZEU0
contig_1	Pyrodigal	gene	1143964	1144644	.	-	.	ID=GCA000010485_01111_gene;locus_tag=GCA000010485_01111;gene=exo
contig_1	Pyrodigal	CDS	1143964	1144644	.	-	0	ID=GCA000010485_01111;Name=Exonuclease;locus_tag=GCA000010485_01111;product=Exonuclease;Dbxref=GO:0046872,GO:0051908;gene=exo;Parent=GCA000010485_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000186858.1,SO:0001217,UniParc:UPI000191E738,UniRef:UniRef100_A0AAN5GWK7,UniRef:UniRef50_P03697,UniRef:UniRef90_P03697;ec_number=3.1.11.3
contig_1	Pyrodigal	gene	1144641	1145426	.	-	.	ID=GCA000010485_01112_gene;locus_tag=GCA000010485_01112;gene=bet
contig_1	Pyrodigal	CDS	1144641	1145426	.	-	0	ID=GCA000010485_01112;Name=phage recombination protein Bet;locus_tag=GCA000010485_01112;product=phage recombination protein Bet;Dbxref=GO:0003677,GO:0006310;gene=bet;Parent=GCA000010485_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000100847.1,SO:0001217,UniParc:UPI000009B019,UniRef:UniRef100_E2QKM8,UniRef:UniRef50_P03698,UniRef:UniRef90_P03698
contig_1	Pyrodigal	gene	1145432	1145728	.	-	.	ID=GCA000010485_01113_gene;locus_tag=GCA000010485_01113
contig_1	Pyrodigal	CDS	1145432	1145728	.	-	0	ID=GCA000010485_01113;Name=Host-nuclease inhibitor protein Gam;locus_tag=GCA000010485_01113;product=Host-nuclease inhibitor protein Gam;Parent=GCA000010485_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000995417.1,SO:0001217,UniParc:UPI000191E739,UniRef:UniRef100_A0AAN5K6M1,UniRef:UniRef50_B0FEB5,UniRef:UniRef90_A0A2S8JPX3
contig_1	Pyrodigal	gene	1145804	1146010	.	-	.	ID=GCA000010485_01114_gene;locus_tag=GCA000010485_01114
contig_1	Pyrodigal	CDS	1145804	1146010	.	-	0	ID=GCA000010485_01114;Name=Cell division inhibitor protein;locus_tag=GCA000010485_01114;product=Cell division inhibitor protein;Parent=GCA000010485_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000233576.1,SO:0001217,UniParc:UPI00005EFA5C,UniRef:UniRef100_A0A023KG71,UniRef:UniRef50_A0A023KG71,UniRef:UniRef90_A0A023KG71
contig_1	Pyrodigal	gene	1146486	1146863	.	-	.	ID=GCA000010485_01115_gene;locus_tag=GCA000010485_01115
contig_1	Pyrodigal	CDS	1146486	1146863	.	-	0	ID=GCA000010485_01115;Name=ASCH domain-containing protein;locus_tag=GCA000010485_01115;product=ASCH domain-containing protein;Parent=GCA000010485_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000866321.1,SO:0001217,UniParc:UPI0000DACDEB,UniRef:UniRef100_A0A0P7T853,UniRef:UniRef50_A0A1F9PYB1,UniRef:UniRef90_A0A0P7T853
contig_1	Pyrodigal	gene	1146841	1147902	.	-	.	ID=GCA000010485_01116_gene;locus_tag=GCA000010485_01116
contig_1	Pyrodigal	CDS	1146841	1147902	.	-	0	ID=GCA000010485_01116;Name=N-acetyltransferase;locus_tag=GCA000010485_01116;product=N-acetyltransferase;Parent=GCA000010485_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000380252.1,SO:0001217,UniParc:UPI0000DACDEC,UniRef:UniRef100_A0A653FR23,UniRef:UniRef50_A0A450YVB8,UniRef:UniRef90_A0A653FR23
contig_1	Pyrodigal	gene	1147983	1148468	.	-	.	ID=GCA000010485_01117_gene;locus_tag=GCA000010485_01117
contig_1	Pyrodigal	CDS	1147983	1148468	.	-	0	ID=GCA000010485_01117;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000010485_01117;product=HTH cro/C1-type domain-containing protein;Parent=GCA000010485_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A29AB0,UniRef:UniRef100_A0A0Q3AKP5,UniRef:UniRef50_A0A830ZEK4,UniRef:UniRef90_A0AAX0PT61
contig_1	Pyrodigal	gene	1148786	1149013	.	+	.	ID=GCA000010485_01118_gene;locus_tag=GCA000010485_01118
contig_1	Pyrodigal	CDS	1148786	1149013	.	+	0	ID=GCA000010485_01118;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_01118;product=Helix-turn-helix domain-containing protein;Parent=GCA000010485_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184665.1,SO:0001217,UniParc:UPI0000DACDEE,UniRef:UniRef100_E4UEC8,UniRef:UniRef50_L0M3L6,UniRef:UniRef90_E4UEC8
contig_1	Pyrodigal	gene	1149044	1149583	.	+	.	ID=GCA000010485_01119_gene;locus_tag=GCA000010485_01119;gene=ydaT
contig_1	Pyrodigal	CDS	1149044	1149583	.	+	0	ID=GCA000010485_01119;Name=Bacterial toxin YdaT domain-containing protein;locus_tag=GCA000010485_01119;product=Bacterial toxin YdaT domain-containing protein;gene=ydaT;Parent=GCA000010485_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001182881.1,SO:0001217,UniParc:UPI0001E17557,UniRef:UniRef100_A0A152V4L3,UniRef:UniRef50_A0A836N779,UniRef:UniRef90_A0A836N779
contig_1	Pyrodigal	gene	1149595	1150599	.	+	.	ID=GCA000010485_01120_gene;locus_tag=GCA000010485_01120
contig_1	Pyrodigal	CDS	1149595	1150599	.	+	0	ID=GCA000010485_01120;Name=Replication protein O;locus_tag=GCA000010485_01120;product=Replication protein O;Parent=GCA000010485_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P03688,UniRef:UniRef90_A0A0H3EHP8
contig_1	Pyrodigal	gene	1150596	1151297	.	+	.	ID=GCA000010485_01121_gene;locus_tag=GCA000010485_01121
contig_1	Pyrodigal	CDS	1150596	1151297	.	+	0	ID=GCA000010485_01121;Name=Replication protein P;locus_tag=GCA000010485_01121;product=Replication protein P;Parent=GCA000010485_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000788877.1,SO:0001217,UniParc:UPI000005FB02,UniRef:UniRef100_A0A0H0LVK8,UniRef:UniRef50_A0A085AR24,UniRef:UniRef90_A0A0H0LVK8
contig_1	Pyrodigal	gene	1151294	1151596	.	+	.	ID=GCA000010485_01122_gene;locus_tag=GCA000010485_01122;gene=renD
contig_1	Pyrodigal	CDS	1151294	1151596	.	+	0	ID=GCA000010485_01122;Name=Putative protein RenD;locus_tag=GCA000010485_01122;product=Putative protein RenD;gene=renD;Parent=GCA000010485_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145918.1,SO:0001217,UniParc:UPI000191E740,UniRef:UniRef100_A0AAN5K7R2,UniRef:UniRef50_P75718,UniRef:UniRef90_P75718
contig_1	Pyrodigal	gene	1151664	1151996	.	+	.	ID=GCA000010485_01123_gene;locus_tag=GCA000010485_01123;gene=emrE
contig_1	Pyrodigal	CDS	1151664	1151996	.	+	0	ID=GCA000010485_01123;Name=multidrug efflux SMR transporter EmrE;locus_tag=GCA000010485_01123;product=multidrug efflux SMR transporter EmrE;Dbxref=GO:0005886,GO:0006805,GO:0006970,GO:0006974,GO:0009410,GO:0015199,GO:0015220,GO:0015297,GO:0015871,GO:0016020,GO:0022857,GO:0031460,GO:0042802,GO:0042908,GO:0042910,GO:0055085,GO:0071466,GO:1990207,GO:1990961;gene=emrE;Parent=GCA000010485_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001070439,KEGG:K03297,NCBIProtein:CAA77936.1,RefSeq:WP_001070442.1,SO:0001217,UniParc:UPI00015C4C5D,UniRef:UniRef100_E2QKN8,UniRef:UniRef50_P23895,UniRef:UniRef90_P23895
contig_1	Pyrodigal	gene	1152252	1153778	.	+	.	ID=GCA000010485_01124_gene;locus_tag=GCA000010485_01124;gene=ybcK
contig_1	Pyrodigal	CDS	1152252	1153778	.	+	0	ID=GCA000010485_01124;Name=putative protein YbcK;locus_tag=GCA000010485_01124;product=putative protein YbcK;Dbxref=GO:0000150,GO:0003677,GO:0006310;gene=ybcK;Parent=GCA000010485_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06400,RefSeq:WP_000709098.1,SO:0001217,UniParc:UPI000191E741,UniRef:UniRef100_A0AAN5K800,UniRef:UniRef50_P77698,UniRef:UniRef90_P77698
contig_1	Pyrodigal	gene	1154128	1155171	.	-	.	ID=GCA000010485_01125_gene;locus_tag=GCA000010485_01125
contig_1	Pyrodigal	CDS	1154128	1155171	.	-	0	ID=GCA000010485_01125;Name=Alpha/beta hydrolase fold domain-containing protein;locus_tag=GCA000010485_01125;product=Alpha/beta hydrolase fold domain-containing protein;Parent=GCA000010485_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700204.1,SO:0001217,UniParc:UPI000191E742,UniRef:UniRef100_A0A0H3EIG2,UniRef:UniRef50_A0A1R4B6J3,UniRef:UniRef90_A0A2S8JTN4
contig_1	Pyrodigal	gene	1155619	1156074	.	+	.	ID=GCA000010485_01126_gene;locus_tag=GCA000010485_01126;gene=ybcN
contig_1	Pyrodigal	CDS	1155619	1156074	.	+	0	ID=GCA000010485_01126;Name=DNA base-flipping protein YbcN;locus_tag=GCA000010485_01126;product=DNA base-flipping protein YbcN;Dbxref=GO:0000405,GO:0003697;gene=ybcN;Parent=GCA000010485_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001054340,RefSeq:WP_001053004.1,SO:0001217,UniParc:UPI000191E743,UniRef:UniRef100_A0A2W0GTV7,UniRef:UniRef50_Q47269,UniRef:UniRef90_Q47269
contig_1	Pyrodigal	gene	1156074	1156244	.	+	.	ID=GCA000010485_01127_gene;locus_tag=GCA000010485_01127;gene=ninE
contig_1	Pyrodigal	CDS	1156074	1156244	.	+	0	ID=GCA000010485_01127;Name=Prophage NinE-like protein;locus_tag=GCA000010485_01127;product=Prophage NinE-like protein;gene=ninE;Parent=GCA000010485_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000224907.1,SO:0001217,UniParc:UPI00000D2A14,UniRef:UniRef100_Q37871,UniRef:UniRef50_Q47270,UniRef:UniRef90_Q47270
contig_1	Pyrodigal	gene	1156237	1156527	.	+	.	ID=GCA000010485_01128_gene;locus_tag=GCA000010485_01128;gene=ybcO
contig_1	Pyrodigal	CDS	1156237	1156527	.	+	0	ID=GCA000010485_01128;Name=Putative nuclease YbcO;locus_tag=GCA000010485_01128;product=Putative nuclease YbcO;Dbxref=GO:0004518,GO:0046872;gene=ybcO;Parent=GCA000010485_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000774475.1,SO:0001217,UniParc:UPI000191E744,UniRef:UniRef100_A0AAN5K671,UniRef:UniRef50_P68661,UniRef:UniRef90_P68661;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1156524	1156886	.	+	.	ID=GCA000010485_01129_gene;locus_tag=GCA000010485_01129;gene=rusA
contig_1	Pyrodigal	CDS	1156524	1156886	.	+	0	ID=GCA000010485_01129;Name=crossover junction endodeoxyribonuclease RusA;locus_tag=GCA000010485_01129;product=crossover junction endodeoxyribonuclease RusA;Dbxref=GO:0000287,GO:0006281,GO:0006310,GO:0008821;gene=rusA;Parent=GCA000010485_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01160,RefSeq:WP_001099697.1,SO:0001217,UniParc:UPI000191E745,UniRef:UniRef100_A0AAN5K810,UniRef:UniRef50_P0AG74,UniRef:UniRef90_A7ZJG7;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1156886	1157023	.	+	.	ID=GCA000010485_01130_gene;locus_tag=GCA000010485_01130;gene=ylcG
contig_1	Pyrodigal	CDS	1156886	1157023	.	+	0	ID=GCA000010485_01130;Name=YlcG family protein;locus_tag=GCA000010485_01130;product=YlcG family protein;gene=ylcG;Parent=GCA000010485_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DC3A78,UniRef:UniRef100_A0A178SV26,UniRef:UniRef50_A0A1X3JLM7,UniRef:UniRef90_A0A1X3JLM7
contig_1	Bakta	gene	1157020	1157046	.	+	.	ID=GCA000010485_01131_gene;locus_tag=GCA000010485_01131;inference=ab initio prediction:Bakta;gene=nmpC
contig_1	Bakta	CDS	1157020	1157046	.	+	0	ID=GCA000010485_01131;Name=Orf33%2C orf151%2C orf56%2C orf96%2C rus%2C orf45%2C orf8%2C orf127%2C and nmpC genes;locus_tag=GCA000010485_01131;product=Orf33%2C orf151%2C orf56%2C orf96%2C rus%2C orf45%2C orf8%2C orf127%2C and nmpC genes;gene=nmpC;Parent=GCA000010485_01131_gene;Note=SO:0001217,UniParc:UPI00000BA293,UniRef:UniRef100_Q47273
contig_1	Pyrodigal	gene	1157109	1157492	.	+	.	ID=GCA000010485_01132_gene;locus_tag=GCA000010485_01132;gene=quuD
contig_1	Pyrodigal	CDS	1157109	1157492	.	+	0	ID=GCA000010485_01132;Name=antitermination protein QuuD;locus_tag=GCA000010485_01132;product=antitermination protein QuuD;Dbxref=GO:0003677,GO:0031564,GO:0044010;gene=quuD;Parent=GCA000010485_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001204791,RefSeq:WP_001204794.1,SO:0001217,UniParc:UPI000191E747,UniRef:UniRef100_A0A3K2NB27,UniRef:UniRef50_Q47274,UniRef:UniRef90_Q47274
contig_1	Pyrodigal	gene	1157681	1158763	.	-	.	ID=GCA000010485_01133_gene;locus_tag=GCA000010485_01133
contig_1	Pyrodigal	CDS	1157681	1158763	.	-	0	ID=GCA000010485_01133;Name=Outer membrane porin protein LC;locus_tag=GCA000010485_01133;product=Outer membrane porin protein LC;Dbxref=GO:0015288,GO:0020002,GO:0034220,GO:0046930;Parent=GCA000010485_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16076,RefSeq:WP_000737277.1,SO:0001217,UniParc:UPI0001C228A8,UniRef:UniRef100_A0A653FS66,UniRef:UniRef50_P02931,UniRef:UniRef90_P21420
contig_1	Pyrodigal	gene	1159353	1159568	.	+	.	ID=GCA000010485_01134_gene;locus_tag=GCA000010485_01134;gene=essD
contig_1	Pyrodigal	CDS	1159353	1159568	.	+	0	ID=GCA000010485_01134;Name=phage lysis protein EssD;locus_tag=GCA000010485_01134;product=phage lysis protein EssD;Dbxref=GO:0044659,GO:0140911;gene=essD;Parent=GCA000010485_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000839596,RefSeq:WP_000839596.1,SO:0001217,UniParc:UPI000012A1E8,UniRef:UniRef100_P0A9R2,UniRef:UniRef50_P0A9R2,UniRef:UniRef90_P0A9R2
contig_1	Pyrodigal	gene	1159568	1160065	.	+	.	ID=GCA000010485_01135_gene;locus_tag=GCA000010485_01135;gene=rrrD
contig_1	Pyrodigal	CDS	1159568	1160065	.	+	0	ID=GCA000010485_01135;Name=lysozyme RrrD;locus_tag=GCA000010485_01135;product=lysozyme RrrD;gene=rrrD;Parent=GCA000010485_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001135281,RefSeq:WP_000075094.1,SO:0001217,UniParc:UPI0001C228A9,UniRef:UniRef100_A0A653FR52,UniRef:UniRef50_P78285,UniRef:UniRef90_H6WZK1;ec_number=3.2.1.17
contig_1	Pyrodigal	gene	1160062	1160505	.	+	.	ID=GCA000010485_01136_gene;locus_tag=GCA000010485_01136
contig_1	Pyrodigal	CDS	1160062	1160505	.	+	0	ID=GCA000010485_01136;Name=Spanin%2C inner membrane subunit;locus_tag=GCA000010485_01136;product=Spanin%2C inner membrane subunit;Parent=GCA000010485_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001441931.1,SO:0001217,UniParc:UPI0001C228AA,UniRef:UniRef100_A0A653FRL9,UniRef:UniRef90_A0A653FTJ0
contig_1	Pyrodigal	gene	1160544	1160918	.	+	.	ID=GCA000010485_01137_gene;locus_tag=GCA000010485_01137
contig_1	Pyrodigal	CDS	1160544	1160918	.	+	0	ID=GCA000010485_01137;Name=hypothetical protein;locus_tag=GCA000010485_01137;product=hypothetical protein;Parent=GCA000010485_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000084844.1,SO:0001217,UniParc:UPI0002551715,UniRef:UniRef100_A0A653FT19,UniRef:UniRef90_A0A653FSR3
contig_1	Pyrodigal	gene	1161017	1161199	.	-	.	ID=GCA000010485_01138_gene;locus_tag=GCA000010485_01138
contig_1	Pyrodigal	CDS	1161017	1161199	.	-	0	ID=GCA000010485_01138;Name=Arginyl-tRNA synthetase;locus_tag=GCA000010485_01138;product=Arginyl-tRNA synthetase;Parent=GCA000010485_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001205136.1,SO:0001217,UniParc:UPI0002A432A7,UniRef:UniRef100_A0A653FR49,UniRef:UniRef50_A0A7L7E845,UniRef:UniRef90_A0A7L7E845
contig_1	Pyrodigal	gene	1161510	1162058	.	+	.	ID=GCA000010485_01139_gene;locus_tag=GCA000010485_01139;gene=nohA
contig_1	Pyrodigal	CDS	1161510	1162058	.	+	0	ID=GCA000010485_01139;Name=P21 prophage-derived terminase small subunit;locus_tag=GCA000010485_01139;product=P21 prophage-derived terminase small subunit;Dbxref=GO:0005524;gene=nohA;Parent=GCA000010485_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000867568.1,SO:0001217,UniParc:UPI0000136BE9,UniRef:UniRef100_P68653,UniRef:UniRef50_P68653,UniRef:UniRef90_P68653
contig_1	Pyrodigal	gene	1162030	1163958	.	+	.	ID=GCA000010485_01140_gene;locus_tag=GCA000010485_01140
contig_1	Pyrodigal	CDS	1162030	1163958	.	+	0	ID=GCA000010485_01140;Name=Terminase%2C large subunit;locus_tag=GCA000010485_01140;product=Terminase%2C large subunit;Parent=GCA000010485_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21512,RefSeq:WP_001573719.1,SO:0001217,UniParc:UPI0001C228AC,UniRef:UniRef100_A0A653FQT6,UniRef:UniRef50_P36693,UniRef:UniRef90_A0A653FQT6;ec_number=3.1.21.4
contig_1	Pyrodigal	gene	1163942	1164148	.	+	.	ID=GCA000010485_01141_gene;locus_tag=GCA000010485_01141
contig_1	Pyrodigal	CDS	1163942	1164148	.	+	0	ID=GCA000010485_01141;Name=phage head-tail joining protein;locus_tag=GCA000010485_01141;product=phage head-tail joining protein;Dbxref=GO:0019058;Parent=GCA000010485_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26964,RefSeq:WP_000258997.1,SO:0001217,UniParc:UPI0000138495,UniRef:UniRef100_P68655,UniRef:UniRef50_P68655,UniRef:UniRef90_P68655
contig_1	Pyrodigal	gene	1164145	1165737	.	+	.	ID=GCA000010485_01142_gene;locus_tag=GCA000010485_01142
contig_1	Pyrodigal	CDS	1164145	1165737	.	+	0	ID=GCA000010485_01142;Name=phage portal protein;locus_tag=GCA000010485_01142;product=phage portal protein;Dbxref=GO:0003677,GO:0005198,GO:0019068,GO:0044423,GO:0046798,GO:0099001;Parent=GCA000010485_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001441934.1,SO:0001217,UniParc:UPI0001C228AD,UniRef:UniRef100_A0A376W460,UniRef:UniRef50_P36272,UniRef:UniRef90_P36272
contig_1	Pyrodigal	gene	1165727	1167232	.	+	.	ID=GCA000010485_01143_gene;locus_tag=GCA000010485_01143
contig_1	Pyrodigal	CDS	1165727	1167232	.	+	0	ID=GCA000010485_01143;Name=Head-tail preconnector protein GP5;locus_tag=GCA000010485_01143;product=Head-tail preconnector protein GP5;Dbxref=GO:0006508,GO:0008236;Parent=GCA000010485_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21511,RefSeq:WP_001253893.1,SO:0001217,UniParc:UPI0001C22948,UniRef:UniRef100_A0A653FQT2,UniRef:UniRef50_P36273,UniRef:UniRef90_P36273;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1167269	1167616	.	+	.	ID=GCA000010485_01144_gene;locus_tag=GCA000010485_01144;gene=shp
contig_1	Pyrodigal	CDS	1167269	1167616	.	+	0	ID=GCA000010485_01144;Name=Head decoration protein;locus_tag=GCA000010485_01144;product=Head decoration protein;Dbxref=GO:0098021;gene=shp;Parent=GCA000010485_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26962,RefSeq:WP_000256813.1,SO:0001217,UniParc:UPI0001C22949,UniRef:UniRef100_A0A653FQU8,UniRef:UniRef50_P36275,UniRef:UniRef90_P36275
contig_1	Pyrodigal	gene	1167674	1168702	.	+	.	ID=GCA000010485_01145_gene;locus_tag=GCA000010485_01145
contig_1	Pyrodigal	CDS	1167674	1168702	.	+	0	ID=GCA000010485_01145;Name=Major capsid protein;locus_tag=GCA000010485_01145;product=Major capsid protein;Parent=GCA000010485_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26961,RefSeq:WP_000522650.1,SO:0001217,UniParc:UPI0001C2294A,UniRef:UniRef100_A0A653FQV9,UniRef:UniRef50_P03713,UniRef:UniRef90_A0A653FQV9
contig_1	Pyrodigal	gene	1168754	1169128	.	+	.	ID=GCA000010485_01146_gene;locus_tag=GCA000010485_01146
contig_1	Pyrodigal	CDS	1168754	1169128	.	+	0	ID=GCA000010485_01146;Name=putative protein in GP7-GP8 intergenic region;locus_tag=GCA000010485_01146;product=putative protein in GP7-GP8 intergenic region;Parent=GCA000010485_01146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000201530.1,SO:0001217,UniParc:UPI000013AFE9,UniRef:UniRef100_P36276,UniRef:UniRef50_P36276,UniRef:UniRef90_P36276
contig_1	Pyrodigal	gene	1169121	1169474	.	+	.	ID=GCA000010485_01147_gene;locus_tag=GCA000010485_01147
contig_1	Pyrodigal	CDS	1169121	1169474	.	+	0	ID=GCA000010485_01147;Name=Tail attachment protein;locus_tag=GCA000010485_01147;product=Tail attachment protein;Parent=GCA000010485_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26966,SO:0001217,UniRef:UniRef50_P36274,UniRef:UniRef90_P36274
contig_1	Pyrodigal	gene	1169486	1170064	.	+	.	ID=GCA000010485_01148_gene;locus_tag=GCA000010485_01148
contig_1	Pyrodigal	CDS	1169486	1170064	.	+	0	ID=GCA000010485_01148;Name=Tail completion protein Z;locus_tag=GCA000010485_01148;product=Tail completion protein Z;Dbxref=GO:0030430,GO:0098015;Parent=GCA000010485_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26967,RefSeq:WP_001007370.1,SO:0001217,UniParc:UPI0001C2294B,UniRef:UniRef100_A0A653FRG8,UniRef:UniRef50_P03731,UniRef:UniRef90_P03731
contig_1	Pyrodigal	gene	1170061	1170456	.	+	.	ID=GCA000010485_01149_gene;locus_tag=GCA000010485_01149
contig_1	Pyrodigal	CDS	1170061	1170456	.	+	0	ID=GCA000010485_01149;Name=Phage minor tail U family protein;locus_tag=GCA000010485_01149;product=Phage minor tail U family protein;Parent=GCA000010485_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26968,RefSeq:WP_000683150.1,SO:0001217,UniParc:UPI0001C2294C,UniRef:UniRef100_A0A061YFL6,UniRef:UniRef50_A0A2W8GUB5,UniRef:UniRef90_A0A3R8M8W0
contig_1	Pyrodigal	gene	1170464	1171204	.	+	.	ID=GCA000010485_01150_gene;locus_tag=GCA000010485_01150
contig_1	Pyrodigal	CDS	1170464	1171204	.	+	0	ID=GCA000010485_01150;Name=Phage tail protein;locus_tag=GCA000010485_01150;product=Phage tail protein;Parent=GCA000010485_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545921.1,SO:0001217,UniParc:UPI0001C2294D,UniRef:UniRef100_A0A653FRB2,UniRef:UniRef50_P03733,UniRef:UniRef90_A0A8S7S8L1
contig_1	Pyrodigal	gene	1171220	1171642	.	+	.	ID=GCA000010485_01151_gene;locus_tag=GCA000010485_01151;gene=gpG
contig_1	Pyrodigal	CDS	1171220	1171642	.	+	0	ID=GCA000010485_01151;Name=phage tail assembly chaperone G;locus_tag=GCA000010485_01151;product=phage tail assembly chaperone G;Dbxref=GO:0030430,GO:0075523,GO:0098003;gene=gpG;Parent=GCA000010485_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000479204.1,SO:0001217,UniParc:UPI0001C2294E,UniRef:UniRef100_A0A653FQY9,UniRef:UniRef50_P03734,UniRef:UniRef90_P03734
contig_1	Pyrodigal	gene	1171624	1172058	.	+	.	ID=GCA000010485_01152_gene;locus_tag=GCA000010485_01152
contig_1	Pyrodigal	CDS	1171624	1172058	.	+	0	ID=GCA000010485_01152;Name=phage tail assembly protein T;locus_tag=GCA000010485_01152;product=phage tail assembly protein T;Parent=GCA000010485_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26971,RefSeq:WP_000459449.1,SO:0001217,UniParc:UPI0001C2294F,UniRef:UniRef100_A0A653FSP0,UniRef:UniRef50_A0A653FSP0,UniRef:UniRef90_A0A653FSP0
contig_1	Pyrodigal	gene	1172051	1174612	.	+	.	ID=GCA000010485_01153_gene;locus_tag=GCA000010485_01153
contig_1	Pyrodigal	CDS	1172051	1174612	.	+	0	ID=GCA000010485_01153;Name=Tape measure protein;locus_tag=GCA000010485_01153;product=Tape measure protein;Dbxref=GO:0098003,GO:0098015,GO:0099001;Parent=GCA000010485_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26972,RefSeq:WP_000840282.1,SO:0001217,UniParc:UPI0001C22950,UniRef:UniRef100_A0A653FQW3,UniRef:UniRef50_P03736,UniRef:UniRef90_P03736
contig_1	Pyrodigal	gene	1174609	1174938	.	+	.	ID=GCA000010485_01154_gene;locus_tag=GCA000010485_01154
contig_1	Pyrodigal	CDS	1174609	1174938	.	+	0	ID=GCA000010485_01154;Name=Phage tail protein;locus_tag=GCA000010485_01154;product=Phage tail protein;Parent=GCA000010485_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26973,RefSeq:WP_000847387.1,SO:0001217,UniParc:UPI0001C22951,UniRef:UniRef100_A0A653FQX1,UniRef:UniRef50_A0AAE9Q2T3,UniRef:UniRef90_A0A2X1N8G8
contig_1	Pyrodigal	gene	1174938	1175636	.	+	.	ID=GCA000010485_01155_gene;locus_tag=GCA000010485_01155
contig_1	Pyrodigal	CDS	1174938	1175636	.	+	0	ID=GCA000010485_01155;Name=phage minor tail protein L;locus_tag=GCA000010485_01155;product=phage minor tail protein L;Dbxref=GO:0030430,GO:0046718,GO:0046872,GO:0051536,GO:0051539,GO:0098003,GO:0098015,GO:0099001;Parent=GCA000010485_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26974,RefSeq:WP_001152542.1,SO:0001217,UniParc:UPI0001C22952,UniRef:UniRef100_A0A653FQY3,UniRef:UniRef50_P03738,UniRef:UniRef90_P03738
contig_1	Pyrodigal	gene	1175786	1176385	.	+	.	ID=GCA000010485_01156_gene;locus_tag=GCA000010485_01156
contig_1	Pyrodigal	CDS	1175786	1176385	.	+	0	ID=GCA000010485_01156;Name=Phage tail assembly protein;locus_tag=GCA000010485_01156;product=Phage tail assembly protein;Parent=GCA000010485_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26975,SO:0001217,UniRef:UniRef50_A0A377CYT1,UniRef:UniRef90_A0A653FUE8
contig_1	Pyrodigal	gene	1176382	1176954	.	+	.	ID=GCA000010485_01157_gene;locus_tag=GCA000010485_01157
contig_1	Pyrodigal	CDS	1176382	1176954	.	+	0	ID=GCA000010485_01157;Name=Tail tip assembly protein I;locus_tag=GCA000010485_01157;product=Tail tip assembly protein I;Dbxref=GO:0030430,GO:0098003;Parent=GCA000010485_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26976,RefSeq:WP_001545958.1,SO:0001217,UniParc:UPI0002A3226A,UniRef:UniRef100_A0A653FSU2,UniRef:UniRef50_P03730,UniRef:UniRef90_P03730
contig_1	Pyrodigal	gene	1177015	1177383	.	+	.	ID=GCA000010485_01158_gene;locus_tag=GCA000010485_01158
contig_1	Pyrodigal	CDS	1177015	1177383	.	+	0	ID=GCA000010485_01158;Name=Putative phage tail component;locus_tag=GCA000010485_01158;product=Putative phage tail component;Parent=GCA000010485_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8E0FHS8,UniRef:UniRef90_A0A376J725
contig_1	Pyrodigal	gene	1177562	1179103	.	+	.	ID=GCA000010485_01159_gene;locus_tag=GCA000010485_01159;gene=tnp
contig_1	Pyrodigal	CDS	1177562	1179103	.	+	0	ID=GCA000010485_01159;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_01159;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_1	Pyrodigal	gene	1179118	1179864	.	+	.	ID=GCA000010485_01160_gene;locus_tag=GCA000010485_01160;gene=istB
contig_1	Pyrodigal	CDS	1179118	1179864	.	+	0	ID=GCA000010485_01160;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_01160;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_1	Pyrodigal	gene	1179964	1182999	.	+	.	ID=GCA000010485_01161_gene;locus_tag=GCA000010485_01161
contig_1	Pyrodigal	CDS	1179964	1182999	.	+	0	ID=GCA000010485_01161;Name=host specificity protein J;locus_tag=GCA000010485_01161;product=host specificity protein J;Parent=GCA000010485_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26977,SO:0001217,UniRef:UniRef50_P03749,UniRef:UniRef90_UPI001009C71C
contig_1	Pyrodigal	gene	1183058	1184986	.	+	.	ID=GCA000010485_01162_gene;locus_tag=GCA000010485_01162
contig_1	Pyrodigal	CDS	1183058	1184986	.	+	0	ID=GCA000010485_01162;Name=Lambda-like tail fibre protein N-terminal domain-containing protein;locus_tag=GCA000010485_01162;product=Lambda-like tail fibre protein N-terminal domain-containing protein;Parent=GCA000010485_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545960.1,SO:0001217,UniParc:UPI0002A2C162,UniRef:UniRef100_A0A653FRZ2,UniRef:UniRef50_Q2LD92,UniRef:UniRef90_Q2LD92
contig_1	Pyrodigal	gene	1185068	1185493	.	+	.	ID=GCA000010485_01163_gene;locus_tag=GCA000010485_01163;gene=tnpA
contig_1	Pyrodigal	CDS	1185068	1185493	.	+	0	ID=GCA000010485_01163;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_01163;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_1	Pyrodigal	gene	1185490	1185840	.	+	.	ID=GCA000010485_01164_gene;locus_tag=GCA000010485_01164;gene=tnpB
contig_1	Pyrodigal	CDS	1185490	1185840	.	+	0	ID=GCA000010485_01164;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_01164;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_1	Pyrodigal	gene	1185871	1187484	.	+	.	ID=GCA000010485_01165_gene;locus_tag=GCA000010485_01165;gene=tnp
contig_1	Pyrodigal	CDS	1185871	1187484	.	+	0	ID=GCA000010485_01165;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_01165;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_1	Pyrodigal	gene	1187652	1187930	.	+	.	ID=GCA000010485_01166_gene;locus_tag=GCA000010485_01166
contig_1	Pyrodigal	CDS	1187652	1187930	.	+	0	ID=GCA000010485_01166;Name=Prophage protein;locus_tag=GCA000010485_01166;product=Prophage protein;Parent=GCA000010485_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000654168.1,SO:0001217,UniParc:UPI000191E7E8,UniRef:UniRef100_A0A0H3EIN1,UniRef:UniRef50_A0A0H3EIN1,UniRef:UniRef90_A0A0H3EIN1
contig_1	Pyrodigal	gene	1187943	1188236	.	+	.	ID=GCA000010485_01167_gene;locus_tag=GCA000010485_01167
contig_1	Pyrodigal	CDS	1187943	1188236	.	+	0	ID=GCA000010485_01167;Name=Ybl63;locus_tag=GCA000010485_01167;product=Ybl63;Parent=GCA000010485_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000355360.1,SO:0001217,UniParc:UPI00000DEAC4,UniRef:UniRef100_E2QKS6,UniRef:UniRef50_B7MEW9,UniRef:UniRef90_E2QKS6
contig_1	Pyrodigal	gene	1188328	1189185	.	-	.	ID=GCA000010485_01168_gene;locus_tag=GCA000010485_01168;gene=sitD
contig_1	Pyrodigal	CDS	1188328	1189185	.	-	0	ID=GCA000010485_01168;Name=iron/manganese ABC transporter permease subunit SitD;locus_tag=GCA000010485_01168;product=iron/manganese ABC transporter permease subunit SitD;gene=sitD;Parent=GCA000010485_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000480208,BlastRules:WP_032491457,KEGG:K11606,RefSeq:WP_000968127.1,SO:0001217,UniParc:UPI00000DEAC6,UniRef:UniRef100_Q2LD90,UniRef:UniRef50_Q3L7K1,UniRef:UniRef90_Q3L7K1
contig_1	Pyrodigal	gene	1189182	1190039	.	-	.	ID=GCA000010485_01169_gene;locus_tag=GCA000010485_01169;gene=sitC
contig_1	Pyrodigal	CDS	1189182	1190039	.	-	0	ID=GCA000010485_01169;Name=iron/manganese ABC transporter permease subunit SitC;locus_tag=GCA000010485_01169;product=iron/manganese ABC transporter permease subunit SitC;gene=sitC;Parent=GCA000010485_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001101723,BlastRules:WP_001104336,KEGG:K11605,RefSeq:WP_001101733.1,SO:0001217,UniParc:UPI0001C22958,UniRef:UniRef100_UPI0001C22958,UniRef:UniRef50_Q56954,UniRef:UniRef90_UPI0001C22958
contig_1	Pyrodigal	gene	1190036	1190863	.	-	.	ID=GCA000010485_01170_gene;locus_tag=GCA000010485_01170;gene=sitB
contig_1	Pyrodigal	CDS	1190036	1190863	.	-	0	ID=GCA000010485_01170;Name=iron/manganese ABC transporter ATP-binding protein SitB;locus_tag=GCA000010485_01170;product=iron/manganese ABC transporter ATP-binding protein SitB;Dbxref=GO:0005524;gene=sitB;Parent=GCA000010485_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000083153,BlastRules:WP_032491456,COG:COG1121,COG:P,RefSeq:WP_000983701.1,SO:0001217,UniParc:UPI0001C22959,UniRef:UniRef100_A0A641DZQ6,UniRef:UniRef50_Q3L7K3,UniRef:UniRef90_Q3L7K3
contig_1	Pyrodigal	gene	1190863	1191777	.	-	.	ID=GCA000010485_01171_gene;locus_tag=GCA000010485_01171;gene=sitA
contig_1	Pyrodigal	CDS	1190863	1191777	.	-	0	ID=GCA000010485_01171;Name=iron/manganese ABC transporter substrate-binding protein SitA;locus_tag=GCA000010485_01171;product=iron/manganese ABC transporter substrate-binding protein SitA;gene=sitA;Parent=GCA000010485_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000182930,BlastRules:WP_000949004,COG:COG0803,COG:P,KEGG:K11604,RefSeq:WP_001256622.1,SO:0001217,UniParc:UPI0001C2295A,UniRef:UniRef100_A0A6D1A3A4,UniRef:UniRef50_Q56952,UniRef:UniRef90_Q6J5P0
contig_1	Pyrodigal	gene	1192705	1192857	.	+	.	ID=GCA000010485_01172_gene;locus_tag=GCA000010485_01172;gene=icd
contig_1	Pyrodigal	CDS	1192705	1192857	.	+	0	ID=GCA000010485_01172;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000010485_01172;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0005737,GO:0005829,GO:0006097,GO:0006099,GO:0006979,GO:0022900,GO:0051287,GO:0097216;gene=icd;Parent=GCA000010485_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,KEGG:K00031,SO:0001217,UniParc:UPI00005EF58C,UniRef:UniRef100_A0A1Q6AQI0,UniRef:UniRef50_P08200,UniRef:UniRef90_P08200;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	1193119	1193523	.	-	.	ID=GCA000010485_01173_gene;locus_tag=GCA000010485_01173;gene=ycgX
contig_1	Pyrodigal	CDS	1193119	1193523	.	-	0	ID=GCA000010485_01173;Name=putative protein YcgX;locus_tag=GCA000010485_01173;product=putative protein YcgX;gene=ycgX;Parent=GCA000010485_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000373104.1,SO:0001217,UniParc:UPI00000DEACC,UniRef:UniRef100_Q2LD85,UniRef:UniRef50_P75988,UniRef:UniRef90_P75988
contig_1	Pyrodigal	gene	1193744	1194475	.	-	.	ID=GCA000010485_01174_gene;locus_tag=GCA000010485_01174;gene=bluR
contig_1	Pyrodigal	CDS	1193744	1194475	.	-	0	ID=GCA000010485_01174;Name=DNA-binding transcriptional repressor BluR;locus_tag=GCA000010485_01174;product=DNA-binding transcriptional repressor BluR;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=bluR;Parent=GCA000010485_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000332303,KEGG:K21972,RefSeq:WP_000332288.1,SO:0001217,UniParc:UPI0001C2295C,UniRef:UniRef100_A0A061YGZ5,UniRef:UniRef50_P75989,UniRef:UniRef90_P75989
contig_1	Pyrodigal	gene	1194680	1195891	.	-	.	ID=GCA000010485_01175_gene;locus_tag=GCA000010485_01175;gene=bluF
contig_1	Pyrodigal	CDS	1194680	1195891	.	-	0	ID=GCA000010485_01175;Name=blue light-responsive regulator BluF;locus_tag=GCA000010485_01175;product=blue light-responsive regulator BluF;Dbxref=GO:0009637,GO:0009882,GO:0050660,GO:0071111,GO:0071949,GO:0140297;gene=bluF;Parent=GCA000010485_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001299269,KEGG:K21973,RefSeq:WP_001311624.1,SO:0001217,UniParc:UPI0001E8AF6A,UniRef:UniRef100_A0A066T184,UniRef:UniRef50_P75990,UniRef:UniRef90_P75990
contig_1	Pyrodigal	gene	1196205	1196441	.	+	.	ID=GCA000010485_01176_gene;locus_tag=GCA000010485_01176;gene=ycgZ
contig_1	Pyrodigal	CDS	1196205	1196441	.	+	0	ID=GCA000010485_01176;Name=regulatory protein YcgZ;locus_tag=GCA000010485_01176;product=regulatory protein YcgZ;Dbxref=GO:0045892,GO:0071468;gene=ycgZ;Parent=GCA000010485_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21974,RefSeq:WP_000554153.1,SO:0001217,UniParc:UPI00000DEAD0,UniRef:UniRef100_J7QDV5,UniRef:UniRef50_P75991,UniRef:UniRef90_P75991
contig_1	Pyrodigal	gene	1196785	1197051	.	+	.	ID=GCA000010485_01177_gene;locus_tag=GCA000010485_01177;gene=ariR
contig_1	Pyrodigal	CDS	1196785	1197051	.	+	0	ID=GCA000010485_01177;Name=biofilm/acid-resistance regulator AriR;locus_tag=GCA000010485_01177;product=biofilm/acid-resistance regulator AriR;Dbxref=GO:0003677,GO:0071468;gene=ariR;Parent=GCA000010485_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000888772,NCBIProtein:AAC74250.1,RefSeq:WP_000888771.1,SO:0001217,UniParc:UPI00000DEAD2,UniRef:UniRef100_A1AA91,UniRef:UniRef50_A7ZKT2,UniRef:UniRef90_A7ZKT2
contig_1	Pyrodigal	gene	1197164	1197412	.	+	.	ID=GCA000010485_01178_gene;locus_tag=GCA000010485_01178;gene=ymgC
contig_1	Pyrodigal	CDS	1197164	1197412	.	+	0	ID=GCA000010485_01178;Name=putative protein YmgC;locus_tag=GCA000010485_01178;product=putative protein YmgC;Dbxref=GO:0044010;gene=ymgC;Parent=GCA000010485_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531618.1,SO:0001217,UniParc:UPI0002A40886,UniRef:UniRef100_A0A061YH01,UniRef:UniRef50_P75994,UniRef:UniRef90_P75994
contig_1	Pyrodigal	gene	1197923	1198603	.	+	.	ID=GCA000010485_01179_gene;locus_tag=GCA000010485_01179
contig_1	Pyrodigal	CDS	1197923	1198603	.	+	0	ID=GCA000010485_01179;Name=EAL domain-containing protein;locus_tag=GCA000010485_01179;product=EAL domain-containing protein;Parent=GCA000010485_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3EG29,UniRef:UniRef90_A0A0H3EG29
contig_1	Pyrodigal	gene	1199822	1200184	.	+	.	ID=GCA000010485_01180_gene;locus_tag=GCA000010485_01180
contig_1	Pyrodigal	CDS	1199822	1200184	.	+	0	ID=GCA000010485_01180;Name=Porin;locus_tag=GCA000010485_01180;product=Porin;Parent=GCA000010485_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295988.1,SO:0001217,UniParc:UPI0001C22965,UniRef:UniRef100_A0A061KJB9,UniRef:UniRef50_S1PQ30,UniRef:UniRef90_S1PQ30
contig_1	Pyrodigal	gene	1200486	1200857	.	+	.	ID=GCA000010485_01181_gene;locus_tag=GCA000010485_01181
contig_1	Pyrodigal	CDS	1200486	1200857	.	+	0	ID=GCA000010485_01181;Name=Autotransporter domain-containing protein;locus_tag=GCA000010485_01181;product=Autotransporter domain-containing protein;Parent=GCA000010485_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E8AF6E,UniRef:UniRef100_A0A8S0FXC2,UniRef:UniRef50_B7LSL4,UniRef:UniRef90_A0A1X3J0R2
contig_1	Pyrodigal	gene	1200916	1201245	.	-	.	ID=GCA000010485_01182_gene;locus_tag=GCA000010485_01182;gene=ymgD
contig_1	Pyrodigal	CDS	1200916	1201245	.	-	0	ID=GCA000010485_01182;Name=putative protein YmgD;locus_tag=GCA000010485_01182;product=putative protein YmgD;Dbxref=GO:0030288;gene=ymgD;Parent=GCA000010485_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295611.1,SO:0001217,UniParc:UPI0000683E66,UniRef:UniRef100_P0AB46,UniRef:UniRef50_P0AB46,UniRef:UniRef90_P0AB46
contig_1	Pyrodigal	gene	1201255	1201539	.	-	.	ID=GCA000010485_01183_gene;locus_tag=GCA000010485_01183;gene=ymgG
contig_1	Pyrodigal	CDS	1201255	1201539	.	-	0	ID=GCA000010485_01183;Name=UPF0757 protein YmgG;locus_tag=GCA000010485_01183;product=UPF0757 protein YmgG;gene=ymgG;Parent=GCA000010485_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001304448.1,SO:0001217,UniParc:UPI0000168082,UniRef:UniRef100_Q7DFV3,UniRef:UniRef50_Q7DFV3,UniRef:UniRef90_Q7DFV3
contig_1	Pyrodigal	gene	1202191	1202502	.	+	.	ID=GCA000010485_01184_gene;locus_tag=GCA000010485_01184
contig_1	Pyrodigal	CDS	1202191	1202502	.	+	0	ID=GCA000010485_01184;Name=Autotransporter domain-containing protein;locus_tag=GCA000010485_01184;product=Autotransporter domain-containing protein;Parent=GCA000010485_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021857EA,UniRef:UniRef100_A0A446ZXE9,UniRef:UniRef50_A0A4C6ZCF0,UniRef:UniRef90_A0A4C6ZCF0
contig_1	Pyrodigal	gene	1202883	1203149	.	-	.	ID=GCA000010485_01185_gene;locus_tag=GCA000010485_01185;gene=minE
contig_1	Pyrodigal	CDS	1202883	1203149	.	-	0	ID=GCA000010485_01185;Name=cell division topological specificity factor MinE;locus_tag=GCA000010485_01185;product=cell division topological specificity factor MinE;Dbxref=GO:0032955,GO:0051301;gene=minE;Parent=GCA000010485_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0851,COG:D,RefSeq:WP_001185665.1,SO:0001217,UniParc:UPI000012F134,UniRef:UniRef100_P0A734,UniRef:UniRef50_P0A734,UniRef:UniRef90_P0A734
contig_1	Pyrodigal	gene	1203153	1203965	.	-	.	ID=GCA000010485_01186_gene;locus_tag=GCA000010485_01186;gene=minD
contig_1	Pyrodigal	CDS	1203153	1203965	.	-	0	ID=GCA000010485_01186;Name=septum site-determining protein MinD;locus_tag=GCA000010485_01186;product=septum site-determining protein MinD;Dbxref=GO:0000917,GO:0005524,GO:0005829,GO:0009898,GO:0016887,GO:0051782;gene=minD;Parent=GCA000010485_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2894,COG:D,RefSeq:WP_000101055.1,SO:0001217,UniParc:UPI00001639A9,UniRef:UniRef100_P0AEZ3,UniRef:UniRef50_P0AEZ3,UniRef:UniRef90_P0AEZ3
contig_1	Pyrodigal	gene	1203989	1204684	.	-	.	ID=GCA000010485_01187_gene;locus_tag=GCA000010485_01187;gene=minC
contig_1	Pyrodigal	CDS	1203989	1204684	.	-	0	ID=GCA000010485_01187;Name=septum site-determining protein MinC;locus_tag=GCA000010485_01187;product=septum site-determining protein MinC;Dbxref=GO:0000902,GO:0000917,GO:0000918,GO:0004857,GO:0051302,GO:1901891;gene=minC;Parent=GCA000010485_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0850,COG:D,RefSeq:WP_001295990.1,SO:0001217,UniParc:UPI000188734E,UniRef:UniRef100_B7MTV4,UniRef:UniRef50_P18196,UniRef:UniRef90_P18196
contig_1	Pyrodigal	gene	1205204	1205572	.	+	.	ID=GCA000010485_01188_gene;locus_tag=GCA000010485_01188;gene=ycgJ
contig_1	Pyrodigal	CDS	1205204	1205572	.	+	0	ID=GCA000010485_01188;Name=putative protein YcgJ;locus_tag=GCA000010485_01188;product=putative protein YcgJ;gene=ycgJ;Parent=GCA000010485_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001056851.1,SO:0001217,UniParc:UPI00000E49E3,UniRef:UniRef100_Q2LD70,UniRef:UniRef50_P76001,UniRef:UniRef90_P76001
contig_1	Pyrodigal	gene	1205675	1206076	.	-	.	ID=GCA000010485_01189_gene;locus_tag=GCA000010485_01189;gene=pliG
contig_1	Pyrodigal	CDS	1205675	1206076	.	-	0	ID=GCA000010485_01189;Name=G-type lysoyme inhibitor PliG;locus_tag=GCA000010485_01189;product=G-type lysoyme inhibitor PliG;gene=pliG;Parent=GCA000010485_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000693755.1,SO:0001217,UniParc:UPI00000E49E4,UniRef:UniRef100_Q2LD69,UniRef:UniRef50_P76002,UniRef:UniRef90_Q2LD69
contig_1	Pyrodigal	gene	1206317	1206610	.	+	.	ID=GCA000010485_01190_gene;locus_tag=GCA000010485_01190;gene=ycgL
contig_1	Pyrodigal	CDS	1206317	1206610	.	+	0	ID=GCA000010485_01190;Name=Protein YcgL;locus_tag=GCA000010485_01190;product=Protein YcgL;gene=ycgL;Parent=GCA000010485_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3100,COG:S,KEGG:K09902,RefSeq:WP_001295992.1,SO:0001217,UniParc:UPI00001B5108,UniRef:UniRef100_P0AB43,UniRef:UniRef50_B4TXY3,UniRef:UniRef90_A7ZKV0
contig_1	Pyrodigal	gene	1206682	1207341	.	+	.	ID=GCA000010485_01191_gene;locus_tag=GCA000010485_01191;gene=ycgM
contig_1	Pyrodigal	CDS	1206682	1207341	.	+	0	ID=GCA000010485_01191;Name=fumarylacetoacetate hydrolase family protein;locus_tag=GCA000010485_01191;product=fumarylacetoacetate hydrolase family protein;Dbxref=GO:0003824,GO:0006107,GO:0018773,GO:0046872,GO:0050163;gene=ycgM;Parent=GCA000010485_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0179,COG:Q,RefSeq:WP_000284278.1,SO:0001217,UniParc:UPI0001C22A18,UniRef:UniRef100_A0A061KP04,UniRef:UniRef50_P76004,UniRef:UniRef90_P76004;ec_number=5.3.2.2
contig_1	Pyrodigal	gene	1207433	1207879	.	+	.	ID=GCA000010485_01192_gene;locus_tag=GCA000010485_01192;gene=ycgN
contig_1	Pyrodigal	CDS	1207433	1207879	.	+	0	ID=GCA000010485_01192;Name=YcgN family cysteine cluster protein;locus_tag=GCA000010485_01192;product=YcgN family cysteine cluster protein;gene=ycgN;Parent=GCA000010485_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09160,RefSeq:WP_001339583.1,SO:0001217,UniParc:UPI000160892B,UniRef:UniRef100_Q8FI28,UniRef:UniRef50_P0A8L5,UniRef:UniRef90_Q8FI28
contig_1	Pyrodigal	gene	1208086	1208346	.	-	.	ID=GCA000010485_01193_gene;locus_tag=GCA000010485_01193
contig_1	Pyrodigal	CDS	1208086	1208346	.	-	0	ID=GCA000010485_01193;Name=Hemolysin E-like protein;locus_tag=GCA000010485_01193;product=Hemolysin E-like protein;Parent=GCA000010485_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11139,SO:0001217,UniParc:UPI00021857EC,UniRef:UniRef100_A0AA36KWN0,UniRef:UniRef50_A0A2W6P773,UniRef:UniRef90_A0A377D2Z9
contig_1	Infernal	gene	1208534	1208612	.	+	.	ID=GCA000010485_01194_gene;locus_tag=GCA000010485_01194;gene=C0299
contig_1	Infernal	ncRNA	1208534	1208612	1.2e-19	+	.	ID=GCA000010485_01194;Name=C0299 RNA;locus_tag=GCA000010485_01194;product=C0299 RNA;Dbxref=RFAM:RF00119;Parent=GCA000010485_01194_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00119
contig_1	Pyrodigal	gene	1208672	1209091	.	+	.	ID=GCA000010485_01195_gene;locus_tag=GCA000010485_01195;gene=umuD
contig_1	Pyrodigal	CDS	1208672	1209091	.	+	0	ID=GCA000010485_01195;Name=Protein UmuD;locus_tag=GCA000010485_01195;product=Protein UmuD;gene=umuD;Parent=GCA000010485_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K03503,RefSeq:WP_000897376.1,SO:0001217,UniParc:UPI0001887351,UniRef:UniRef100_A0A066T163,UniRef:UniRef50_P0AG11,UniRef:UniRef90_A0A066T163;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1209091	1210359	.	+	.	ID=GCA000010485_01196_gene;locus_tag=GCA000010485_01196;gene=umuC
contig_1	Pyrodigal	CDS	1209091	1210359	.	+	0	ID=GCA000010485_01196;Name=DNA polymerase V catalytic protein;locus_tag=GCA000010485_01196;product=DNA polymerase V catalytic protein;Dbxref=GO:0003684,GO:0003697,GO:0003887,GO:0005829,GO:0005886,GO:0006974,GO:0008094,GO:0009355,GO:0009432,GO:0016020,GO:0019985,GO:0042276;gene=umuC;Parent=GCA000010485_01196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000457616,COG:COG0389,COG:L,KEGG:K03502,RefSeq:WP_000457596.1,SO:0001217,UniParc:UPI0001C22A1A,UniRef:UniRef100_A0A061KJA4,UniRef:UniRef50_P04152,UniRef:UniRef90_P04152;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1210404	1210934	.	-	.	ID=GCA000010485_01197_gene;locus_tag=GCA000010485_01197;gene=dsbB
contig_1	Pyrodigal	CDS	1210404	1210934	.	-	0	ID=GCA000010485_01197;Name=disulfide bond formation protein DsbB;locus_tag=GCA000010485_01197;product=disulfide bond formation protein DsbB;Dbxref=GO:0005886,GO:0006457,GO:0009055,GO:0015035,GO:0016020;gene=dsbB;Parent=GCA000010485_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000943452.1,SO:0001217,UniParc:UPI00001298C6,UniRef:UniRef100_A1AAA8,UniRef:UniRef50_P0A6M2,UniRef:UniRef90_A1AAA8;ec_number=1.8.5.-
contig_1	Pyrodigal	gene	1211080	1212621	.	-	.	ID=GCA000010485_01198_gene;locus_tag=GCA000010485_01198;gene=nhaB
contig_1	Pyrodigal	CDS	1211080	1212621	.	-	0	ID=GCA000010485_01198;Name=Na(+)/H(+) antiporter NhaB;locus_tag=GCA000010485_01198;product=Na(+)/H(+) antiporter NhaB;Dbxref=GO:0005886,GO:0006814,GO:0015385,GO:0016020;gene=nhaB;Parent=GCA000010485_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3067,COG:CP,KEGG:K03314,RefSeq:WP_000406413.1,SO:0001217,UniParc:UPI0001C22A1B,UniRef:UniRef100_A0A061YFY1,UniRef:UniRef50_P0AFA7,UniRef:UniRef90_P0AFA7
contig_1	Pyrodigal	gene	1212843	1213562	.	+	.	ID=GCA000010485_01199_gene;locus_tag=GCA000010485_01199;gene=fadR
contig_1	Pyrodigal	CDS	1212843	1213562	.	+	0	ID=GCA000010485_01199;Name=fatty acid metabolism transcriptional regulator FadR;locus_tag=GCA000010485_01199;product=fatty acid metabolism transcriptional regulator FadR;Dbxref=GO:0000062,GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006631,GO:0019217;gene=fadR;Parent=GCA000010485_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,KEGG:K03603,RefSeq:WP_000234823.1,SO:0001217,UniParc:UPI0000111C8C,UniRef:UniRef100_P0A8V6,UniRef:UniRef50_P0A8V6,UniRef:UniRef90_P0A8V6
contig_1	Pyrodigal	gene	1213614	1215146	.	-	.	ID=GCA000010485_01200_gene;locus_tag=GCA000010485_01200;gene=ycgB
contig_1	Pyrodigal	CDS	1213614	1215146	.	-	0	ID=GCA000010485_01200;Name=SpoVR family protein;locus_tag=GCA000010485_01200;product=SpoVR family protein;Dbxref=GO:0006974;gene=ycgB;Parent=GCA000010485_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2719,COG:D,KEGG:K06415,RefSeq:WP_000190854.1,SO:0001217,UniParc:UPI000013A68C,UniRef:UniRef100_P29013,UniRef:UniRef50_P29013,UniRef:UniRef90_P29013
contig_1	Pyrodigal	gene	1215476	1216774	.	+	.	ID=GCA000010485_01201_gene;locus_tag=GCA000010485_01201;gene=dadA
contig_1	Pyrodigal	CDS	1215476	1216774	.	+	0	ID=GCA000010485_01201;Name=D-amino acid dehydrogenase;locus_tag=GCA000010485_01201;product=D-amino acid dehydrogenase;Dbxref=GO:0005737,GO:0005886,GO:0008718,GO:0055130;gene=dadA;Parent=GCA000010485_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001266908,COG:COG0665,COG:E,KEGG:K00285,RefSeq:WP_001266906.1,SO:0001217,UniParc:UPI0001C22A1C,UniRef:UniRef100_A0A3H9KEU2,UniRef:UniRef50_P0A6J5,UniRef:UniRef90_P0A6J5;ec_number=1.4.99.-
contig_1	Pyrodigal	gene	1216784	1217854	.	+	.	ID=GCA000010485_01202_gene;locus_tag=GCA000010485_01202;gene=dadX
contig_1	Pyrodigal	CDS	1216784	1217854	.	+	0	ID=GCA000010485_01202;Name=catabolic alanine racemase DadX;locus_tag=GCA000010485_01202;product=catabolic alanine racemase DadX;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0019480,GO:0030170,GO:0030632,GO:0042803;gene=dadX;Parent=GCA000010485_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01775,RefSeq:WP_000197847.1,SO:0001217,UniParc:UPI0001C22A1D,UniRef:UniRef100_A0A061KNZ4,UniRef:UniRef50_P29012,UniRef:UniRef90_P29012;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	1217911	1219647	.	-	.	ID=GCA000010485_01203_gene;locus_tag=GCA000010485_01203;gene=nhaP2
contig_1	Pyrodigal	CDS	1217911	1219647	.	-	0	ID=GCA000010485_01203;Name=potassium/proton antiporter;locus_tag=GCA000010485_01203;product=potassium/proton antiporter;Dbxref=GO:0005886,GO:0006813,GO:0006884,GO:0015386,GO:0016020,GO:0050660,GO:0051139,GO:0055085;gene=nhaP2;Parent=GCA000010485_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3263,COG:CP,KEGG:K11105,RefSeq:WP_000340206.1,SO:0001217,UniParc:UPI000013A699,UniRef:UniRef100_A7ZKW2,UniRef:UniRef50_Q87KV8,UniRef:UniRef90_P76007
contig_1	Pyrodigal	gene	1219742	1220656	.	-	.	ID=GCA000010485_01204_gene;locus_tag=GCA000010485_01204;gene=ldcA
contig_1	Pyrodigal	CDS	1219742	1220656	.	-	0	ID=GCA000010485_01204;Name=muramoyltetrapeptide carboxypeptidase;locus_tag=GCA000010485_01204;product=muramoyltetrapeptide carboxypeptidase;Dbxref=GO:0004180,GO:0005829,GO:0006508,GO:0008236,GO:0008360,GO:0009252,GO:0009254,GO:0042803,GO:0061787,GO:0071555,GO:0106415;gene=ldcA;Parent=GCA000010485_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1619,COG:M,KEGG:K01297,RefSeq:WP_000051565.1,SO:0001217,UniParc:UPI0001C22A1E,UniRef:UniRef100_A0A061KLZ8,UniRef:UniRef50_P76008,UniRef:UniRef90_P76008;ec_number=3.4.17.13
contig_1	Pyrodigal	gene	1220756	1221367	.	+	.	ID=GCA000010485_01205_gene;locus_tag=GCA000010485_01205;gene=emtA
contig_1	Pyrodigal	CDS	1220756	1221367	.	+	0	ID=GCA000010485_01205;Name=membrane-bound lytic murein transglycosylase EmtA;locus_tag=GCA000010485_01205;product=membrane-bound lytic murein transglycosylase EmtA;Dbxref=GO:0000270,GO:0008932,GO:0009279,GO:0016998,GO:0071555;gene=emtA;Parent=GCA000010485_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,KEGG:K08308,RefSeq:WP_001295994.1,SO:0001217,UniParc:UPI0001627853,UniRef:UniRef100_B7MK90,UniRef:UniRef50_P0C960,UniRef:UniRef90_P0C960;ec_number=4.2.2.n2
contig_1	Pyrodigal	gene	1221369	1222103	.	-	.	ID=GCA000010485_01206_gene;locus_tag=GCA000010485_01206;gene=ycgR
contig_1	Pyrodigal	CDS	1221369	1222103	.	-	0	ID=GCA000010485_01206;Name=Flagellar brake protein YcgR;locus_tag=GCA000010485_01206;product=Flagellar brake protein YcgR;Dbxref=GO:0009425,GO:0035438,GO:0071945,GO:0071973,GO:1902201;gene=ycgR;Parent=GCA000010485_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5581,COG:N,KEGG:K21087,RefSeq:WP_000020178.1,SO:0001217,UniParc:UPI0001C22A20,UniRef:UniRef100_A0A061KJ94,UniRef:UniRef50_P76010,UniRef:UniRef90_P76010
contig_1	Pyrodigal	gene	1222304	1222558	.	+	.	ID=GCA000010485_01207_gene;locus_tag=GCA000010485_01207;gene=ymgE
contig_1	Pyrodigal	CDS	1222304	1222558	.	+	0	ID=GCA000010485_01207;Name=UPF0410 protein YmgE;locus_tag=GCA000010485_01207;product=UPF0410 protein YmgE;Dbxref=GO:0005886;gene=ymgE;Parent=GCA000010485_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2261,COG:R,RefSeq:WP_000511315.1,SO:0001217,UniParc:UPI00000D035C,UniRef:UniRef100_E2QKX1,UniRef:UniRef50_P76011,UniRef:UniRef90_P76011
contig_1	Pyrodigal	gene	1222608	1224578	.	-	.	ID=GCA000010485_01208_gene;locus_tag=GCA000010485_01208;gene=fepA
contig_1	Pyrodigal	CDS	1222608	1224578	.	-	0	ID=GCA000010485_01208;Name=Putative outer membrane receptor%2C probably tonB dependent;locus_tag=GCA000010485_01208;product=Putative outer membrane receptor%2C probably tonB dependent;gene=fepA;Parent=GCA000010485_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4771,COG:P,RefSeq:WP_001295995.1,SO:0001217,UniParc:UPI0001C22A21,UniRef:UniRef100_A0A066ST66,UniRef:UniRef50_E5YL90,UniRef:UniRef90_A0A0H2V954
contig_1	Pyrodigal	gene	1224604	1225458	.	-	.	ID=GCA000010485_01209_gene;locus_tag=GCA000010485_01209;gene=modD
contig_1	Pyrodigal	CDS	1224604	1225458	.	-	0	ID=GCA000010485_01209;Name=Putative pyrophosphorylase ModD;locus_tag=GCA000010485_01209;product=Putative pyrophosphorylase ModD;Dbxref=GO:0004514,GO:0005737,GO:0009435,GO:0034213;gene=modD;Parent=GCA000010485_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0157,COG:H,KEGG:K03813,RefSeq:WP_000576824.1,SO:0001217,UniParc:UPI0001C22A22,UniRef:UniRef100_A0A066T185,UniRef:UniRef50_P94777,UniRef:UniRef90_P94777;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	1225455	1226267	.	-	.	ID=GCA000010485_01210_gene;locus_tag=GCA000010485_01210
contig_1	Pyrodigal	CDS	1225455	1226267	.	-	0	ID=GCA000010485_01210;Name=Methyltransferase domain-containing protein;locus_tag=GCA000010485_01210;product=Methyltransferase domain-containing protein;Parent=GCA000010485_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000904011.1,SO:0001217,UniParc:UPI00000B525E,UniRef:UniRef100_O87503,UniRef:UniRef50_K8VZJ7,UniRef:UniRef90_A0A2B7LYK5
contig_1	Pyrodigal	gene	1226277	1227035	.	-	.	ID=GCA000010485_01211_gene;locus_tag=GCA000010485_01211;gene=fepC
contig_1	Pyrodigal	CDS	1226277	1227035	.	-	0	ID=GCA000010485_01211;Name=ABC transporter%2C ATP-binding protein;locus_tag=GCA000010485_01211;product=ABC transporter%2C ATP-binding protein;gene=fepC;Parent=GCA000010485_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_000173310.1,SO:0001217,UniParc:UPI00000DEAE7,UniRef:UniRef100_A0A061YDM2,UniRef:UniRef50_A0AA91ELS1,UniRef:UniRef90_B7N405
contig_1	Pyrodigal	gene	1227032	1228012	.	-	.	ID=GCA000010485_01212_gene;locus_tag=GCA000010485_01212;gene=fepD
contig_1	Pyrodigal	CDS	1227032	1228012	.	-	0	ID=GCA000010485_01212;Name=Iron ABC transporter permease;locus_tag=GCA000010485_01212;product=Iron ABC transporter permease;gene=fepD;Parent=GCA000010485_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_001261263.1,SO:0001217,UniParc:UPI0000D5087D,UniRef:UniRef100_A0A061KNY3,UniRef:UniRef50_A0A5Q5A4M7,UniRef:UniRef90_A0A5Q5A4M7
contig_1	Pyrodigal	gene	1228012	1229034	.	-	.	ID=GCA000010485_01213_gene;locus_tag=GCA000010485_01213
contig_1	Pyrodigal	CDS	1228012	1229034	.	-	0	ID=GCA000010485_01213;Name=putative ATP-binding protein of ABC transporter;locus_tag=GCA000010485_01213;product=putative ATP-binding protein of ABC transporter;Parent=GCA000010485_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000060128.1,SO:0001217,UniParc:UPI0001C22A23,UniRef:UniRef100_A0A061KPE0,UniRef:UniRef50_A8AFT5,UniRef:UniRef90_B7UQ85
contig_1	Pyrodigal	gene	1229364	1231061	.	-	.	ID=GCA000010485_01214_gene;locus_tag=GCA000010485_01214;gene=treA
contig_1	Pyrodigal	CDS	1229364	1231061	.	-	0	ID=GCA000010485_01214;Name=alpha%2Calpha-trehalase;locus_tag=GCA000010485_01214;product=alpha%2Calpha-trehalase;Dbxref=GO:0004555,GO:0005993,GO:0042597,GO:0071474;gene=treA;Parent=GCA000010485_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000841714,COG:COG1626,COG:G,RefSeq:WP_000841745.1,SO:0001217,UniParc:UPI0001C22A24,UniRef:UniRef100_A0A066T181,UniRef:UniRef50_P13482,UniRef:UniRef90_P13482;ec_number=3.2.1.28
contig_1	Pyrodigal	gene	1231381	1232799	.	-	.	ID=GCA000010485_01215_gene;locus_tag=GCA000010485_01215;gene=dhaM
contig_1	Pyrodigal	CDS	1231381	1232799	.	-	0	ID=GCA000010485_01215;Name=dihydroxyacetone kinase phosphoryl donor subunit DhaM;locus_tag=GCA000010485_01215;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;Dbxref=GO:0005829,GO:0006090,GO:0006974,GO:0009401,GO:0016020,GO:0016310,GO:0019563,GO:0042803,GO:0046835,GO:0047324,GO:1990234;gene=dhaM;Parent=GCA000010485_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295996.1,SO:0001217,UniParc:UPI0001C22A25,UniRef:UniRef100_A0A066SWR8,UniRef:UniRef50_P37349,UniRef:UniRef90_P37349;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	1232810	1233442	.	-	.	ID=GCA000010485_01216_gene;locus_tag=GCA000010485_01216;gene=dhaL
contig_1	Pyrodigal	CDS	1232810	1233442	.	-	0	ID=GCA000010485_01216;Name=dihydroxyacetone kinase subunit DhaL;locus_tag=GCA000010485_01216;product=dihydroxyacetone kinase subunit DhaL;Dbxref=GO:0000287,GO:0004371,GO:0005524,GO:0005829,GO:0006071,GO:0006090,GO:0019563,GO:0043531,GO:0046835,GO:0047324,GO:1990234;gene=dhaL;Parent=GCA000010485_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05879,RefSeq:WP_012896778.1,SO:0001217,UniParc:UPI0001C22A26,UniRef:UniRef100_UPI0001C22A26,UniRef:UniRef50_P76014,UniRef:UniRef90_P76014;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	1233453	1234523	.	-	.	ID=GCA000010485_01217_gene;locus_tag=GCA000010485_01217;gene=dhaK
contig_1	Pyrodigal	CDS	1233453	1234523	.	-	0	ID=GCA000010485_01217;Name=dihydroxyacetone kinase subunit DhaK;locus_tag=GCA000010485_01217;product=dihydroxyacetone kinase subunit DhaK;Dbxref=GO:0004371,GO:0005829,GO:0006071,GO:0006090,GO:0006974,GO:0019563,GO:0042182,GO:0042802,GO:0042803,GO:0046365,GO:0046835,GO:0047324,GO:0061610,GO:1990234;gene=dhaK;Parent=GCA000010485_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733698.1,SO:0001217,UniParc:UPI0001C22A27,UniRef:UniRef100_A0A066ST59,UniRef:UniRef50_P76015,UniRef:UniRef90_P76015;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	1234751	1236670	.	+	.	ID=GCA000010485_01218_gene;locus_tag=GCA000010485_01218;gene=dhaR
contig_1	Pyrodigal	CDS	1234751	1236670	.	+	0	ID=GCA000010485_01218;Name=dihydroxyacetone kinase operon transcriptional regulator DhaR;locus_tag=GCA000010485_01218;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;Dbxref=GO:0005524,GO:0006071,GO:0006351,GO:0006355,GO:0008134,GO:0016887,GO:0043565;gene=dhaR;Parent=GCA000010485_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05880,RefSeq:WP_001295998.1,SO:0001217,UniParc:UPI000188738C,UniRef:UniRef100_A0A061YG06,UniRef:UniRef50_P76016,UniRef:UniRef90_P76016
contig_1	Pyrodigal	gene	1237152	1237391	.	+	.	ID=GCA000010485_01219_gene;locus_tag=GCA000010485_01219
contig_1	Pyrodigal	CDS	1237152	1237391	.	+	0	ID=GCA000010485_01219;Name=hypothetical protein;locus_tag=GCA000010485_01219;product=hypothetical protein;Parent=GCA000010485_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A1BD9E,UniRef:UniRef100_A0A1U9U2T0,UniRef:UniRef50_A0A1U9U2T0,UniRef:UniRef90_A0A1U9U2T0
contig_1	Pyrodigal	gene	1237962	1239719	.	+	.	ID=GCA000010485_01220_gene;locus_tag=GCA000010485_01220
contig_1	Pyrodigal	CDS	1237962	1239719	.	+	0	ID=GCA000010485_01220;Name=retron Ec67 family RNA-directed DNA polymerase/endonuclease;locus_tag=GCA000010485_01220;product=retron Ec67 family RNA-directed DNA polymerase/endonuclease;Parent=GCA000010485_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00986,RefSeq:WP_000476153.1,SO:0001217,UniParc:UPI0001C22A29,UniRef:UniRef100_A0A066SWR3,UniRef:UniRef50_A0A066SWR3,UniRef:UniRef90_A0A066SWR3;ec_number=2.7.7.49
contig_1	Pyrodigal	gene	1239741	1239908	.	+	.	ID=GCA000010485_01221_gene;locus_tag=GCA000010485_01221
contig_1	Pyrodigal	CDS	1239741	1239908	.	+	0	ID=GCA000010485_01221;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_01221;product=Helix-turn-helix domain-containing protein;Parent=GCA000010485_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A28995,UniRef:UniRef100_A0AA36KWX0,UniRef:UniRef50_A0AA36KWX0,UniRef:UniRef90_A0AA36KWX0
contig_1	Pyrodigal	gene	1239966	1241093	.	+	.	ID=GCA000010485_01222_gene;locus_tag=GCA000010485_01222
contig_1	Pyrodigal	CDS	1239966	1241093	.	+	0	ID=GCA000010485_01222;Name=ABC-three component systems C-terminal domain-containing protein;locus_tag=GCA000010485_01222;product=ABC-three component systems C-terminal domain-containing protein;Parent=GCA000010485_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000229546.1,SO:0001217,UniParc:UPI0002A38E88,UniRef:UniRef100_A0A061KJU1,UniRef:UniRef50_A0A4Q1VBE9,UniRef:UniRef90_A0A089Q007
contig_1	Pyrodigal	gene	1241090	1241605	.	+	.	ID=GCA000010485_01223_gene;locus_tag=GCA000010485_01223
contig_1	Pyrodigal	CDS	1241090	1241605	.	+	0	ID=GCA000010485_01223;Name=Threonine transporter;locus_tag=GCA000010485_01223;product=Threonine transporter;Parent=GCA000010485_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001293316.1,SO:0001217,UniParc:UPI0002A3A786,UniRef:UniRef100_A0A135XXB6,UniRef:UniRef50_A0A0D7P203,UniRef:UniRef90_A0A135XXB6
contig_1	Pyrodigal	gene	1241607	1243493	.	+	.	ID=GCA000010485_01224_gene;locus_tag=GCA000010485_01224
contig_1	Pyrodigal	CDS	1241607	1243493	.	+	0	ID=GCA000010485_01224;Name=Rad50/SbcC-type AAA domain-containing protein;locus_tag=GCA000010485_01224;product=Rad50/SbcC-type AAA domain-containing protein;Parent=GCA000010485_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000944508.1,SO:0001217,UniParc:UPI0002A1EC47,UniRef:UniRef100_A0A061YCW5,UniRef:UniRef50_A0A3E2KZ40,UniRef:UniRef90_A0A089Q230
contig_1	Pyrodigal	gene	1244061	1244306	.	-	.	ID=GCA000010485_01225_gene;locus_tag=GCA000010485_01225
contig_1	Pyrodigal	CDS	1244061	1244306	.	-	0	ID=GCA000010485_01225;Name=hypothetical protein;locus_tag=GCA000010485_01225;product=hypothetical protein;Parent=GCA000010485_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A27B90,UniRef:UniRef100_A0A061KQH5,UniRef:UniRef50_A0A6I5ANI9,UniRef:UniRef90_A0A061KQH5
contig_1	Pyrodigal	gene	1244373	1244708	.	-	.	ID=GCA000010485_01226_gene;locus_tag=GCA000010485_01226
contig_1	Pyrodigal	CDS	1244373	1244708	.	-	0	ID=GCA000010485_01226;Name=Lipoprotein;locus_tag=GCA000010485_01226;product=Lipoprotein;Parent=GCA000010485_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000816505.1,SO:0001217,UniParc:UPI0001C22AEE,UniRef:UniRef100_A0A066T128,UniRef:UniRef50_A0A633HFX2,UniRef:UniRef90_A0A066T128
contig_1	Pyrodigal	gene	1244739	1245098	.	-	.	ID=GCA000010485_01227_gene;locus_tag=GCA000010485_01227
contig_1	Pyrodigal	CDS	1244739	1245098	.	-	0	ID=GCA000010485_01227;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000010485_01227;product=Acyl-CoA dehydrogenase;Parent=GCA000010485_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080418.1,SO:0001217,UniParc:UPI0001C22AEF,UniRef:UniRef100_A0A061Y8T2,UniRef:UniRef50_D4F460,UniRef:UniRef90_A0A8B4TR12
contig_1	Pyrodigal	gene	1245113	1245640	.	-	.	ID=GCA000010485_01228_gene;locus_tag=GCA000010485_01228
contig_1	Pyrodigal	CDS	1245113	1245640	.	-	0	ID=GCA000010485_01228;Name=Phage protein;locus_tag=GCA000010485_01228;product=Phage protein;Parent=GCA000010485_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000246193.1,SO:0001217,UniParc:UPI0001C22AF0,UniRef:UniRef100_A0A7A6V973,UniRef:UniRef50_A0A7U9DHM3,UniRef:UniRef90_S4YQA2
contig_1	Pyrodigal	gene	1245652	1245921	.	-	.	ID=GCA000010485_01229_gene;locus_tag=GCA000010485_01229
contig_1	Pyrodigal	CDS	1245652	1245921	.	-	0	ID=GCA000010485_01229;Name=Ner winged helix-turn-helix DNA-binding domain-containing protein;locus_tag=GCA000010485_01229;product=Ner winged helix-turn-helix DNA-binding domain-containing protein;Parent=GCA000010485_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531625.1,SO:0001217,UniParc:UPI0001C22AF1,UniRef:UniRef100_A0A1U9U385,UniRef:UniRef50_A0A7U9DFR6,UniRef:UniRef90_A0A7U9DFR6
contig_1	Pyrodigal	gene	1246043	1246531	.	+	.	ID=GCA000010485_01230_gene;locus_tag=GCA000010485_01230
contig_1	Pyrodigal	CDS	1246043	1246531	.	+	0	ID=GCA000010485_01230;Name=HTH Mu-type domain-containing protein;locus_tag=GCA000010485_01230;product=HTH Mu-type domain-containing protein;Parent=GCA000010485_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000095786.1,SO:0001217,UniParc:UPI0002A435F2,UniRef:UniRef100_A0AAF0NND9,UniRef:UniRef50_A0A7H5AD91,UniRef:UniRef90_A0A7H5AD91
contig_1	Pyrodigal	gene	1246856	1247278	.	+	.	ID=GCA000010485_01231_gene;locus_tag=GCA000010485_01231
contig_1	Pyrodigal	CDS	1246856	1247278	.	+	0	ID=GCA000010485_01231;Name=DUF2787 domain-containing protein;locus_tag=GCA000010485_01231;product=DUF2787 domain-containing protein;Parent=GCA000010485_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22AF3,UniRef:UniRef100_A0A1X9VJG2,UniRef:UniRef50_S4YV85,UniRef:UniRef90_A0A1B7LAC7
contig_1	Pyrodigal	gene	1247320	1247859	.	+	.	ID=GCA000010485_01232_gene;locus_tag=GCA000010485_01232
contig_1	Pyrodigal	CDS	1247320	1247859	.	+	0	ID=GCA000010485_01232;Name=Peptidase C39 domain-containing protein;locus_tag=GCA000010485_01232;product=Peptidase C39 domain-containing protein;Parent=GCA000010485_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22AF4,UniRef:UniRef100_A0AAF0NMQ6,UniRef:UniRef50_A0A3S5DPI2,UniRef:UniRef90_A0A3S5DPI2
contig_1	Pyrodigal	gene	1247861	1248313	.	+	.	ID=GCA000010485_01233_gene;locus_tag=GCA000010485_01233;gene=radC
contig_1	Pyrodigal	CDS	1247861	1248313	.	+	0	ID=GCA000010485_01233;Name=DNA repair protein RadC;locus_tag=GCA000010485_01233;product=DNA repair protein RadC;gene=radC;Parent=GCA000010485_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2003,COG:L,KEGG:K03630,RefSeq:WP_000177771.1,SO:0001217,UniParc:UPI0002A3F12C,UniRef:UniRef100_A0A7I0L111,UniRef:UniRef50_A0A564N2R4,UniRef:UniRef90_A0A447UY91
contig_1	Pyrodigal	gene	1248375	1249289	.	+	.	ID=GCA000010485_01234_gene;locus_tag=GCA000010485_01234;gene=xerD
contig_1	Pyrodigal	CDS	1248375	1249289	.	+	0	ID=GCA000010485_01234;Name=Tyr recombinase domain-containing protein;locus_tag=GCA000010485_01234;product=Tyr recombinase domain-containing protein;gene=xerD;Parent=GCA000010485_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,SO:0001217,UniRef:UniRef50_A0A7U9H6T0,UniRef:UniRef90_A0A7U9H6T0
contig_1	Pyrodigal	gene	1249276	1249890	.	-	.	ID=GCA000010485_01235_gene;locus_tag=GCA000010485_01235
contig_1	Pyrodigal	CDS	1249276	1249890	.	-	0	ID=GCA000010485_01235;Name=Prophage protein;locus_tag=GCA000010485_01235;product=Prophage protein;Parent=GCA000010485_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580009.1,SO:0001217,UniParc:UPI0002185813,UniRef:UniRef100_A0A061YCP6,UniRef:UniRef50_A0A8S0FX72,UniRef:UniRef90_A0A8S0FX72
contig_1	Pyrodigal	gene	1250113	1250310	.	+	.	ID=GCA000010485_01236_gene;locus_tag=GCA000010485_01236;gene=alpA
contig_1	Pyrodigal	CDS	1250113	1250310	.	+	0	ID=GCA000010485_01236;Name=AlpA family transcriptional regulator;locus_tag=GCA000010485_01236;product=AlpA family transcriptional regulator;gene=alpA;Parent=GCA000010485_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001095670.1,SO:0001217,UniParc:UPI0001C22AF8,UniRef:UniRef100_A0A641BEU3,UniRef:UniRef50_A0A2C6DUL4,UniRef:UniRef90_A0A641BEU3
contig_1	Pyrodigal	gene	1250312	1250779	.	+	.	ID=GCA000010485_01237_gene;locus_tag=GCA000010485_01237
contig_1	Pyrodigal	CDS	1250312	1250779	.	+	0	ID=GCA000010485_01237;Name=Phage protein;locus_tag=GCA000010485_01237;product=Phage protein;Parent=GCA000010485_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000658784.1,SO:0001217,UniParc:UPI0002A36EB0,UniRef:UniRef100_A0A061KNF0,UniRef:UniRef50_A0A7U9DJU8,UniRef:UniRef90_A0A061KNF0
contig_1	Pyrodigal	gene	1250867	1251721	.	+	.	ID=GCA000010485_01238_gene;locus_tag=GCA000010485_01238
contig_1	Pyrodigal	CDS	1250867	1251721	.	+	0	ID=GCA000010485_01238;Name=Replication protein;locus_tag=GCA000010485_01238;product=Replication protein;Parent=GCA000010485_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001000136.1,SO:0001217,UniParc:UPI0001C22AF9,UniRef:UniRef100_A0A061KMT6,UniRef:UniRef50_A0A7U9DJ01,UniRef:UniRef90_A0A7U9DJ01
contig_1	Pyrodigal	gene	1252298	1253695	.	+	.	ID=GCA000010485_01239_gene;locus_tag=GCA000010485_01239
contig_1	Pyrodigal	CDS	1252298	1253695	.	+	0	ID=GCA000010485_01239;Name=Replication protein;locus_tag=GCA000010485_01239;product=Replication protein;Parent=GCA000010485_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531628.1,SO:0001217,UniParc:UPI0001C22AFA,UniRef:UniRef100_A0A061YFL2,UniRef:UniRef50_A0A2K9PJY2,UniRef:UniRef90_A0A061YFL2
contig_1	Pyrodigal	gene	1253873	1254553	.	+	.	ID=GCA000010485_01240_gene;locus_tag=GCA000010485_01240
contig_1	Pyrodigal	CDS	1253873	1254553	.	+	0	ID=GCA000010485_01240;Name=Transposase;locus_tag=GCA000010485_01240;product=Transposase;Parent=GCA000010485_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_D8MTR3,UniRef:UniRef90_A0A192CLM5
contig_1	Pyrodigal	gene	1254691	1257348	.	+	.	ID=GCA000010485_01241_gene;locus_tag=GCA000010485_01241
contig_1	Pyrodigal	CDS	1254691	1257348	.	+	0	ID=GCA000010485_01241;Name=DUF2339 domain-containing protein;locus_tag=GCA000010485_01241;product=DUF2339 domain-containing protein;Parent=GCA000010485_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000343920.1,SO:0001217,UniParc:UPI0001C22AFC,UniRef:UniRef100_A0A066T114,UniRef:UniRef50_A7MEL8,UniRef:UniRef90_A0A066T114
contig_1	Pyrodigal	gene	1257345	1257557	.	+	.	ID=GCA000010485_01242_gene;locus_tag=GCA000010485_01242
contig_1	Pyrodigal	CDS	1257345	1257557	.	+	0	ID=GCA000010485_01242;Name=DUF2339 domain-containing protein;locus_tag=GCA000010485_01242;product=DUF2339 domain-containing protein;Parent=GCA000010485_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296002.1,SO:0001217,UniParc:UPI0001C22AFD,UniRef:UniRef100_A0A8S0FVY9,UniRef:UniRef50_A0A8S0FVY9,UniRef:UniRef90_A0A8S0FVY9
contig_1	Pyrodigal	gene	1257544	1258740	.	+	.	ID=GCA000010485_01243_gene;locus_tag=GCA000010485_01243
contig_1	Pyrodigal	CDS	1257544	1258740	.	+	0	ID=GCA000010485_01243;Name=DUF3999 domain-containing protein;locus_tag=GCA000010485_01243;product=DUF3999 domain-containing protein;Parent=GCA000010485_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A3B135,UniRef:UniRef100_A0AA36P6A2,UniRef:UniRef50_A8AK52,UniRef:UniRef90_A0A192CMT3
contig_1	Pyrodigal	gene	1258927	1259064	.	-	.	ID=GCA000010485_01244_gene;locus_tag=GCA000010485_01244
contig_1	Pyrodigal	CDS	1258927	1259064	.	-	0	ID=GCA000010485_01244;Name=hypothetical protein;locus_tag=GCA000010485_01244;product=hypothetical protein;Parent=GCA000010485_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296004.1,SO:0001217,UniParc:UPI0002185818,UniRef:UniRef100_A0AAF0SNJ7,UniRef:UniRef50_A0AAF0SNJ7,UniRef:UniRef90_A0AAF0SNJ7
contig_1	Pyrodigal	gene	1259223	1259420	.	+	.	ID=GCA000010485_01245_gene;locus_tag=GCA000010485_01245
contig_1	Pyrodigal	CDS	1259223	1259420	.	+	0	ID=GCA000010485_01245;Name=hypothetical protein;locus_tag=GCA000010485_01245;product=hypothetical protein;Parent=GCA000010485_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531630.1,SO:0001217,UniParc:UPI0002A25B8D,UniRef:UniRef100_A0A1U9U2G3,UniRef:UniRef50_A0A1U9U2G3,UniRef:UniRef90_A0A1U9U2G3
contig_1	Pyrodigal	gene	1259622	1259873	.	+	.	ID=GCA000010485_01246_gene;locus_tag=GCA000010485_01246
contig_1	Pyrodigal	CDS	1259622	1259873	.	+	0	ID=GCA000010485_01246;Name=Insertion sequence ATP-binding protein;locus_tag=GCA000010485_01246;product=Insertion sequence ATP-binding protein;Parent=GCA000010485_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22AFF,UniRef:UniRef100_A0AA36P697,UniRef:UniRef50_A0A1G5EUE9,UniRef:UniRef90_A0AA36P697
contig_1	Pyrodigal	gene	1260008	1260178	.	+	.	ID=GCA000010485_01247_gene;locus_tag=GCA000010485_01247
contig_1	Pyrodigal	CDS	1260008	1260178	.	+	0	ID=GCA000010485_01247;Name=hypothetical protein;locus_tag=GCA000010485_01247;product=hypothetical protein;Parent=GCA000010485_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002185819,UniRef:UniRef100_A0A781FDC6,UniRef:UniRef50_A0A0U1R195,UniRef:UniRef90_A0A781FDC6
contig_1	Pyrodigal	gene	1260496	1260987	.	-	.	ID=GCA000010485_01248_gene;locus_tag=GCA000010485_01248
contig_1	Pyrodigal	CDS	1260496	1260987	.	-	0	ID=GCA000010485_01248;Name=IS3 family transposase;locus_tag=GCA000010485_01248;product=IS3 family transposase;Dbxref=GO:0004803;Parent=GCA000010485_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3DS59,UniRef:UniRef90_A0A0H3DS59
contig_1	Pyrodigal	gene	1261347	1261631	.	-	.	ID=GCA000010485_01249_gene;locus_tag=GCA000010485_01249;gene=tnp
contig_1	Pyrodigal	CDS	1261347	1261631	.	-	0	ID=GCA000010485_01249;Name=IS3 family ISEc24 transposase ORF A;locus_tag=GCA000010485_01249;product=IS3 family ISEc24 transposase ORF A;gene=tnp;Parent=GCA000010485_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc24,SO:0001217,UniParc:UPI0001C22B02,UniRef:UniRef100_A0A061KSY9,UniRef:UniRef50_A0A1W6B6F7,UniRef:UniRef90_A0A2L1UVN0
contig_1	Pyrodigal	gene	1261742	1262917	.	-	.	ID=GCA000010485_01250_gene;locus_tag=GCA000010485_01250;gene=fimB
contig_1	Pyrodigal	CDS	1261742	1262917	.	-	0	ID=GCA000010485_01250;Name=Phage integrase;locus_tag=GCA000010485_01250;product=Phage integrase;gene=fimB;Parent=GCA000010485_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0582,COG:LX,RefSeq:WP_000954595.1,SO:0001217,UniParc:UPI0001C22B03,UniRef:UniRef100_A0A061YI02,UniRef:UniRef50_A0A645A5A0,UniRef:UniRef90_A0A0J1R6L8
contig_1	Pyrodigal	gene	1263132	1264223	.	-	.	ID=GCA000010485_01251_gene;locus_tag=GCA000010485_01251;gene=ychF
contig_1	Pyrodigal	CDS	1263132	1264223	.	-	0	ID=GCA000010485_01251;Name=redox-regulated ATPase YchF;locus_tag=GCA000010485_01251;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0005737,GO:0016887,GO:0043023,GO:0046872;gene=ychF;Parent=GCA000010485_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_000505872.1,SO:0001217,UniParc:UPI00000DEAF0,UniRef:UniRef100_E2QKY3,UniRef:UniRef50_P0ABU2,UniRef:UniRef90_P0ABU2
contig_1	Pyrodigal	gene	1264340	1264924	.	-	.	ID=GCA000010485_01252_gene;locus_tag=GCA000010485_01252;gene=pth
contig_1	Pyrodigal	CDS	1264340	1264924	.	-	0	ID=GCA000010485_01252;Name=aminoacyl-tRNA hydrolase;locus_tag=GCA000010485_01252;product=aminoacyl-tRNA hydrolase;Dbxref=GO:0004045,GO:0005737,GO:0006412;gene=pth;Parent=GCA000010485_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000152940.1,SO:0001217,UniParc:UPI0001C22B04,UniRef:UniRef100_A0A066T103,UniRef:UniRef50_P0A7D1,UniRef:UniRef90_P0A281;ec_number=3.1.1.29
contig_1	Pyrodigal	gene	1265202	1265480	.	+	.	ID=GCA000010485_01253_gene;locus_tag=GCA000010485_01253;gene=ychH
contig_1	Pyrodigal	CDS	1265202	1265480	.	+	0	ID=GCA000010485_01253;Name=stress-induced protein YchH;locus_tag=GCA000010485_01253;product=stress-induced protein YchH;Dbxref=GO:0044011,GO:0070301,GO:0071276;gene=ychH;Parent=GCA000010485_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000823885,RefSeq:WP_000823885.1,SO:0001217,UniParc:UPI000013A6AE,UniRef:UniRef100_P0AB49,UniRef:UniRef50_P0AB49,UniRef:UniRef90_P0AB49
contig_1	Pyrodigal	gene	1265535	1267187	.	-	.	ID=GCA000010485_01254_gene;locus_tag=GCA000010485_01254;gene=dauA
contig_1	Pyrodigal	CDS	1265535	1267187	.	-	0	ID=GCA000010485_01254;Name=C4-dicarboxylic acid transporter DauA;locus_tag=GCA000010485_01254;product=C4-dicarboxylic acid transporter DauA;Dbxref=GO:0005886,GO:0008271,GO:0015138,GO:0015141,GO:0015183,GO:0015741,GO:0015810,GO:0071422;gene=dauA;Parent=GCA000010485_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0659,COG:P,KEGG:K03321,RefSeq:WP_001304433.1,SO:0001217,UniParc:UPI00005EF5A2,UniRef:UniRef100_A0A2G8ZPL6,UniRef:UniRef50_P0AFR2,UniRef:UniRef90_P0AFR2
contig_1	Pyrodigal	gene	1267339	1268352	.	-	.	ID=GCA000010485_01255_gene;locus_tag=GCA000010485_01255;gene=prs
contig_1	Pyrodigal	CDS	1267339	1268352	.	-	0	ID=GCA000010485_01255;Name=ribose-phosphate diphosphokinase;locus_tag=GCA000010485_01255;product=ribose-phosphate diphosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0005829,GO:0006015,GO:0006164,GO:0009156,GO:0016301,GO:0034214,GO:0042301,GO:0042802,GO:0043531;gene=prs;Parent=GCA000010485_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001298109,COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_001119392.1,SO:0001217,UniParc:UPI0000167DAA,UniRef:UniRef100_A0A024L4E5,UniRef:UniRef50_P0A717,UniRef:UniRef90_P0A717;ec_number=2.7.6.1
contig_1	Pyrodigal	gene	1268437	1269288	.	-	.	ID=GCA000010485_01256_gene;locus_tag=GCA000010485_01256;gene=ispE
contig_1	Pyrodigal	CDS	1268437	1269288	.	-	0	ID=GCA000010485_01256;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA000010485_01256;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0005524,GO:0016114,GO:0019288,GO:0050515;gene=ispE;Parent=GCA000010485_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1947,COG:I,KEGG:K00919,RefSeq:WP_001260309.1,SO:0001217,UniParc:UPI0001C22B05,UniRef:UniRef100_A0A066T148,UniRef:UniRef50_P62615,UniRef:UniRef90_P62615;ec_number=2.7.1.148
contig_1	Pyrodigal	gene	1269288	1269911	.	-	.	ID=GCA000010485_01257_gene;locus_tag=GCA000010485_01257;gene=lolB
contig_1	Pyrodigal	CDS	1269288	1269911	.	-	0	ID=GCA000010485_01257;Name=lipoprotein insertase outer membrane protein LolB;locus_tag=GCA000010485_01257;product=lipoprotein insertase outer membrane protein LolB;Dbxref=GO:0009279,GO:0015031,GO:0044874;gene=lolB;Parent=GCA000010485_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02494,RefSeq:WP_000174480.1,SO:0001217,UniParc:UPI0001C22B06,UniRef:UniRef100_A0A061YFK0,UniRef:UniRef50_P61320,UniRef:UniRef90_P61320
contig_1	Pyrodigal	gene	1270125	1271381	.	+	.	ID=GCA000010485_01258_gene;locus_tag=GCA000010485_01258;gene=hemA
contig_1	Pyrodigal	CDS	1270125	1271381	.	+	0	ID=GCA000010485_01258;Name=glutamyl-tRNA reductase;locus_tag=GCA000010485_01258;product=glutamyl-tRNA reductase;Dbxref=GO:0008883,GO:0019353,GO:0050661;gene=hemA;Parent=GCA000010485_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0373,COG:H,RefSeq:WP_001296006.1,SO:0001217,UniParc:UPI0001C22B07,UniRef:UniRef100_A0A061KSE1,UniRef:UniRef50_P0A6X1,UniRef:UniRef90_P0A6X1;ec_number=1.2.1.70
contig_1	Pyrodigal	gene	1271423	1272505	.	+	.	ID=GCA000010485_01259_gene;locus_tag=GCA000010485_01259;gene=prfA
contig_1	Pyrodigal	CDS	1271423	1272505	.	+	0	ID=GCA000010485_01259;Name=peptide chain release factor 1;locus_tag=GCA000010485_01259;product=peptide chain release factor 1;Dbxref=GO:0003747,GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000010485_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,RefSeq:WP_000804726.1,SO:0001217,UniParc:UPI0000133730,UniRef:UniRef100_P0A7I0,UniRef:UniRef50_P0A7I0,UniRef:UniRef90_P0A7I0
contig_1	Pyrodigal	gene	1272505	1273338	.	+	.	ID=GCA000010485_01260_gene;locus_tag=GCA000010485_01260;gene=prmC
contig_1	Pyrodigal	CDS	1272505	1273338	.	+	0	ID=GCA000010485_01260;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000010485_01260;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0006479,GO:0008276,GO:0008757,GO:0010468,GO:0018364,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000010485_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K02493,RefSeq:WP_000456450.1,SO:0001217,UniParc:UPI0001C22B08,UniRef:UniRef100_A0A061YHZ5,UniRef:UniRef50_P0ACC1,UniRef:UniRef90_P0ACC1;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	1273335	1273727	.	+	.	ID=GCA000010485_01261_gene;locus_tag=GCA000010485_01261;gene=sirB2
contig_1	Pyrodigal	CDS	1273335	1273727	.	+	0	ID=GCA000010485_01261;Name=invasion regulator SirB2;locus_tag=GCA000010485_01261;product=invasion regulator SirB2;Dbxref=GO:0005886;gene=sirB2;Parent=GCA000010485_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3094,COG:S,RefSeq:WP_000200375.1,SO:0001217,UniParc:UPI00000DEAF4,UniRef:UniRef100_E2QLG7,UniRef:UniRef50_Q46755,UniRef:UniRef90_Q46755
contig_1	Pyrodigal	gene	1273731	1274540	.	+	.	ID=GCA000010485_01262_gene;locus_tag=GCA000010485_01262;gene=sirB1
contig_1	Pyrodigal	CDS	1273731	1274540	.	+	0	ID=GCA000010485_01262;Name=invasion regulator SirB1;locus_tag=GCA000010485_01262;product=invasion regulator SirB1;gene=sirB1;Parent=GCA000010485_01262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2912,COG:T,RefSeq:WP_001257044.1,SO:0001217,UniParc:UPI0000135980,UniRef:UniRef100_P0AGM5,UniRef:UniRef50_P0A2L9,UniRef:UniRef90_P0AGM5
contig_1	Pyrodigal	gene	1274576	1275430	.	+	.	ID=GCA000010485_01263_gene;locus_tag=GCA000010485_01263;gene=kdsA
contig_1	Pyrodigal	CDS	1274576	1275430	.	+	0	ID=GCA000010485_01263;Name=3-deoxy-8-phosphooctulonate synthase;locus_tag=GCA000010485_01263;product=3-deoxy-8-phosphooctulonate synthase;Dbxref=GO:0005829,GO:0008676,GO:0019294;gene=kdsA;Parent=GCA000010485_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2877,COG:M,KEGG:K01627,RefSeq:WP_000811065.1,SO:0001217,UniParc:UPI0000110F14,UniRef:UniRef100_P0A715,UniRef:UniRef50_P0A715,UniRef:UniRef90_P0A715;ec_number=2.5.1.55
contig_1	Pyrodigal	gene	1275579	1275686	.	-	.	ID=GCA000010485_01264_gene;locus_tag=GCA000010485_01264
contig_1	Pyrodigal	CDS	1275579	1275686	.	-	0	ID=GCA000010485_01264;Name=Toxin Ldr%2C type I toxin-antitoxin system family protein;locus_tag=GCA000010485_01264;product=Toxin Ldr%2C type I toxin-antitoxin system family protein;Parent=GCA000010485_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531632.1,SO:0001217,UniParc:UPI0002A45FC6,UniRef:UniRef100_A0A8S0FW42,UniRef:UniRef50_A0A8S0FW42,UniRef:UniRef90_A0A8S0FW42
contig_1	Infernal	gene	1275734	1275799	.	+	.	ID=GCA000010485_01265_gene;locus_tag=GCA000010485_01265;gene=rdlD
contig_1	Infernal	ncRNA	1275734	1275799	1.2e-17	+	.	ID=GCA000010485_01265;Name=rdlD antitoxin;locus_tag=GCA000010485_01265;gene=rdlD;product=rdlD antitoxin;Dbxref=RFAM:RF01813;Parent=GCA000010485_01265_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01813
contig_1	Pyrodigal	gene	1276091	1277191	.	-	.	ID=GCA000010485_01266_gene;locus_tag=GCA000010485_01266;gene=chaA
contig_1	Pyrodigal	CDS	1276091	1277191	.	-	0	ID=GCA000010485_01266;Name=sodium-potassium/proton antiporter ChaA;locus_tag=GCA000010485_01266;product=sodium-potassium/proton antiporter ChaA;Dbxref=GO:0005886,GO:0010446,GO:0015385,GO:0015386;gene=chaA;Parent=GCA000010485_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0387,COG:P,RefSeq:WP_000063608.1,SO:0001217,UniParc:UPI00005EF5A8,UniRef:UniRef100_E2QLH1,UniRef:UniRef50_P31801,UniRef:UniRef90_P31801
contig_1	Pyrodigal	gene	1277461	1277700	.	+	.	ID=GCA000010485_01267_gene;locus_tag=GCA000010485_01267;gene=chaB
contig_1	Pyrodigal	CDS	1277461	1277700	.	+	0	ID=GCA000010485_01267;Name=putative cation transport regulator ChaB;locus_tag=GCA000010485_01267;product=putative cation transport regulator ChaB;gene=chaB;Parent=GCA000010485_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120702.1,SO:0001217,UniParc:UPI0001C22B0A,UniRef:UniRef100_A0A061YHZ1,UniRef:UniRef50_A0A239SJ27,UniRef:UniRef90_A0A376P4B6
contig_1	Pyrodigal	gene	1277828	1278544	.	+	.	ID=GCA000010485_01268_gene;locus_tag=GCA000010485_01268;gene=chaC
contig_1	Pyrodigal	CDS	1277828	1278544	.	+	0	ID=GCA000010485_01268;Name=glutathione-specific gamma-glutamylcyclotransferase;locus_tag=GCA000010485_01268;product=glutathione-specific gamma-glutamylcyclotransferase;Dbxref=GO:0003839,GO:0005737,GO:0006751,GO:0061928;gene=chaC;Parent=GCA000010485_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001336325,COG:COG3703,COG:P,KEGG:K07232,RefSeq:WP_001306584.1,SO:0001217,UniParc:UPI000018F824,UniRef:UniRef100_A0A0J1ZRD4,UniRef:UniRef50_P39163,UniRef:UniRef90_P39163;ec_number=4.3.2.7
contig_1	Pyrodigal	gene	1278588	1278941	.	-	.	ID=GCA000010485_01269_gene;locus_tag=GCA000010485_01269;gene=ychN
contig_1	Pyrodigal	CDS	1278588	1278941	.	-	0	ID=GCA000010485_01269;Name=DsrE/F sulfur relay family protein YchN;locus_tag=GCA000010485_01269;product=DsrE/F sulfur relay family protein YchN;Dbxref=GO:0005829;gene=ychN;Parent=GCA000010485_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001169669,COG:COG1553,COG:J,RefSeq:WP_001169659.1,SO:0001217,UniParc:UPI00000DEAFA,UniRef:UniRef100_E2QLH4,UniRef:UniRef50_P0AB52,UniRef:UniRef90_P0AB52
contig_1	Pyrodigal	gene	1279126	1280520	.	+	.	ID=GCA000010485_01270_gene;locus_tag=GCA000010485_01270;gene=ychO
contig_1	Pyrodigal	CDS	1279126	1280520	.	+	0	ID=GCA000010485_01270;Name=inverse autotransporter invasin YchO;locus_tag=GCA000010485_01270;product=inverse autotransporter invasin YchO;Dbxref=GO:0009279,GO:0042597;gene=ychO;Parent=GCA000010485_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000086217,RefSeq:WP_000086187.1,SO:0001217,UniParc:UPI0002185858,UniRef:UniRef100_A0A066SSP1,UniRef:UniRef50_P39165,UniRef:UniRef90_P39165
contig_1	Pyrodigal	gene	1280521	1281171	.	-	.	ID=GCA000010485_01271_gene;locus_tag=GCA000010485_01271;gene=narX
contig_1	Pyrodigal	CDS	1280521	1281171	.	-	0	ID=GCA000010485_01271;Name=nitrate/nitrite two-component system sensor histidine kinase NarX;locus_tag=GCA000010485_01271;product=nitrate/nitrite two-component system sensor histidine kinase NarX;Dbxref=GO:0000155,GO:0000160,GO:0003677,GO:0005524,GO:0006355,GO:0016020,GO:0042128,GO:0046983;gene=narX;Parent=GCA000010485_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07673,RefSeq:WP_000070491.1,SO:0001217,UniParc:UPI000012FD89,UniRef:UniRef100_P0AF28,UniRef:UniRef50_P0AF28,UniRef:UniRef90_P0AF28;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1281164	1282960	.	-	.	ID=GCA000010485_01272_gene;locus_tag=GCA000010485_01272;gene=narX
contig_1	Pyrodigal	CDS	1281164	1282960	.	-	0	ID=GCA000010485_01272;Name=nitrate/nitrite two-component system sensor histidine kinase NarX;locus_tag=GCA000010485_01272;product=nitrate/nitrite two-component system sensor histidine kinase NarX;Dbxref=GO:0000155,GO:0000160,GO:0004721,GO:0005524,GO:0005886,GO:0006974,GO:0007165,GO:0016020,GO:0030288,GO:0042128,GO:0042803,GO:0046983,GO:0071249,GO:0071250;gene=narX;Parent=GCA000010485_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3850,COG:T,KEGG:K07673,RefSeq:WP_000918042.1,SO:0001217,UniParc:UPI0001C228DB,UniRef:UniRef100_A0A066T135,UniRef:UniRef50_P0AFA2,UniRef:UniRef90_P0AFA2;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1282986	1283204	.	+	.	ID=GCA000010485_01273_gene;locus_tag=GCA000010485_01273
contig_1	Pyrodigal	CDS	1282986	1283204	.	+	0	ID=GCA000010485_01273;Name=hypothetical protein;locus_tag=GCA000010485_01273;product=hypothetical protein;Parent=GCA000010485_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000DEAFD,UniRef:UniRef100_A0A066T0Y9,UniRef:UniRef50_Q32GY0,UniRef:UniRef90_Q32GY0
contig_1	Pyrodigal	gene	1283299	1284690	.	+	.	ID=GCA000010485_01274_gene;locus_tag=GCA000010485_01274;gene=narK
contig_1	Pyrodigal	CDS	1283299	1284690	.	+	0	ID=GCA000010485_01274;Name=nitrate transporter NarK;locus_tag=GCA000010485_01274;product=nitrate transporter NarK;Dbxref=GO:0005452,GO:0005886,GO:0015112,GO:0015113,GO:0015706,GO:0015707,GO:0042128,GO:0043602;gene=narK;Parent=GCA000010485_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000019827,BlastRules:WP_000841851,BlastRules:WP_003898992,BlastRules:WP_010886631,COG:COG2223,COG:P,KEGG:K02575,RefSeq:WP_000019827.1,SO:0001217,UniParc:UPI000012FD88,UniRef:UniRef100_P10903,UniRef:UniRef50_P10903,UniRef:UniRef90_P10903
contig_1	Pyrodigal	gene	1285083	1288826	.	+	.	ID=GCA000010485_01275_gene;locus_tag=GCA000010485_01275;gene=narG
contig_1	Pyrodigal	CDS	1285083	1288826	.	+	0	ID=GCA000010485_01275;Name=nitrate reductase subunit alpha;locus_tag=GCA000010485_01275;product=nitrate reductase subunit alpha;Dbxref=GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0016020,GO:0019645,GO:0042126,GO:0042128,GO:0043546,GO:0044799,GO:0046872,GO:0051539,GO:0160182;gene=narG;Parent=GCA000010485_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5013,COG:CP,KEGG:K00370,RefSeq:WP_000032955.1,SO:0001217,UniParc:UPI00000DEAFF,UniRef:UniRef100_E2QLH9,UniRef:UniRef50_P09152,UniRef:UniRef90_P09152;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1288823	1290361	.	+	.	ID=GCA000010485_01276_gene;locus_tag=GCA000010485_01276;gene=narH
contig_1	Pyrodigal	CDS	1288823	1290361	.	+	0	ID=GCA000010485_01276;Name=nitrate reductase subunit beta;locus_tag=GCA000010485_01276;product=nitrate reductase subunit beta;Dbxref=GO:0005886,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0042126,GO:0042128,GO:0046872,GO:0051538,GO:0051539,GO:0160182;gene=narH;Parent=GCA000010485_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1140,COG:CP,KEGG:K00371,RefSeq:WP_000702647.1,SO:0001217,UniParc:UPI00000DEB00,UniRef:UniRef100_E2QLI0,UniRef:UniRef50_P11349,UniRef:UniRef90_P11349;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1290358	1291068	.	+	.	ID=GCA000010485_01277_gene;locus_tag=GCA000010485_01277;gene=narJ
contig_1	Pyrodigal	CDS	1290358	1291068	.	+	0	ID=GCA000010485_01277;Name=nitrate reductase molybdenum cofactor assembly chaperone;locus_tag=GCA000010485_01277;product=nitrate reductase molybdenum cofactor assembly chaperone;Dbxref=GO:0005737,GO:0016530,GO:0042128,GO:0051082,GO:0051131;gene=narJ;Parent=GCA000010485_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2180,COG:CPO,KEGG:K00373,RefSeq:WP_000571681.1,SO:0001217,UniParc:UPI000012FD87,UniRef:UniRef100_P0AF26,UniRef:UniRef50_P0AF26,UniRef:UniRef90_P0AF26
contig_1	Pyrodigal	gene	1291068	1291745	.	+	.	ID=GCA000010485_01278_gene;locus_tag=GCA000010485_01278;gene=narI
contig_1	Pyrodigal	CDS	1291068	1291745	.	+	0	ID=GCA000010485_01278;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000010485_01278;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0005886,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0016020,GO:0019645,GO:0020037,GO:0042126,GO:0042128,GO:0044799,GO:0046872,GO:0160182;gene=narI;Parent=GCA000010485_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2181,COG:CP,RefSeq:WP_001160110.1,SO:0001217,UniParc:UPI00000D0393,UniRef:UniRef100_C3TCR2,UniRef:UniRef50_P11350,UniRef:UniRef90_P11350;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1291889	1292896	.	+	.	ID=GCA000010485_01279_gene;locus_tag=GCA000010485_01279
contig_1	Pyrodigal	CDS	1291889	1292896	.	+	0	ID=GCA000010485_01279;Name=3-oxoacyl-[acyl-carrier-protein] synthase 3;locus_tag=GCA000010485_01279;product=3-oxoacyl-[acyl-carrier-protein] synthase 3;Parent=GCA000010485_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296007.1,SO:0001217,UniParc:UPI000218585A,UniRef:UniRef100_A0A135XX58,UniRef:UniRef50_A0A0T9J877,UniRef:UniRef90_A0A370V819
contig_1	Pyrodigal	gene	1292893	1293909	.	+	.	ID=GCA000010485_01280_gene;locus_tag=GCA000010485_01280
contig_1	Pyrodigal	CDS	1292893	1293909	.	+	0	ID=GCA000010485_01280;Name=NAD-dependent epimerase/dehydratase domain-containing protein;locus_tag=GCA000010485_01280;product=NAD-dependent epimerase/dehydratase domain-containing protein;Parent=GCA000010485_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531634.1,SO:0001217,UniParc:UPI0001C228DD,UniRef:UniRef100_A0A061KMP6,UniRef:UniRef50_D3VB06,UniRef:UniRef90_B7LSG0
contig_1	Pyrodigal	gene	1293887	1294693	.	+	.	ID=GCA000010485_01281_gene;locus_tag=GCA000010485_01281
contig_1	Pyrodigal	CDS	1293887	1294693	.	+	0	ID=GCA000010485_01281;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000010485_01281;product=Metallo-beta-lactamase domain-containing protein;Parent=GCA000010485_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13075,RefSeq:WP_001074140.1,SO:0001217,UniParc:UPI00000DEB04,UniRef:UniRef100_E2QLI5,UniRef:UniRef50_A0A0F7HH33,UniRef:UniRef90_B7LSF9;ec_number=3.1.1.81
contig_1	Pyrodigal	gene	1294690	1295976	.	+	.	ID=GCA000010485_01282_gene;locus_tag=GCA000010485_01282
contig_1	Pyrodigal	CDS	1294690	1295976	.	+	0	ID=GCA000010485_01282;Name=F390 synthetase-related protein;locus_tag=GCA000010485_01282;product=F390 synthetase-related protein;Parent=GCA000010485_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000612537.1,SO:0001217,UniParc:UPI0001C228DE,UniRef:UniRef100_A0A061KSV7,UniRef:UniRef50_Q6DAZ0,UniRef:UniRef90_B7LSF8
contig_1	Pyrodigal	gene	1295973	1296575	.	+	.	ID=GCA000010485_01283_gene;locus_tag=GCA000010485_01283
contig_1	Pyrodigal	CDS	1295973	1296575	.	+	0	ID=GCA000010485_01283;Name=Acid phosphatase/vanadium-dependent haloperoxidase;locus_tag=GCA000010485_01283;product=Acid phosphatase/vanadium-dependent haloperoxidase;Parent=GCA000010485_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296008.1,SO:0001217,UniParc:UPI0001E8B5C2,UniRef:UniRef100_A0A066T0Y0,UniRef:UniRef50_G8LEH9,UniRef:UniRef90_A0A234MT17
contig_1	Pyrodigal	gene	1296568	1297692	.	+	.	ID=GCA000010485_01284_gene;locus_tag=GCA000010485_01284
contig_1	Pyrodigal	CDS	1296568	1297692	.	+	0	ID=GCA000010485_01284;Name=Fatty acid hydroxylase domain-containing protein;locus_tag=GCA000010485_01284;product=Fatty acid hydroxylase domain-containing protein;Parent=GCA000010485_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001281627.1,SO:0001217,UniParc:UPI0001C228E0,UniRef:UniRef100_A0A066SWL9,UniRef:UniRef50_A0A1B7JWD9,UniRef:UniRef90_B7LSF6
contig_1	Pyrodigal	gene	1297679	1298770	.	+	.	ID=GCA000010485_01285_gene;locus_tag=GCA000010485_01285
contig_1	Pyrodigal	CDS	1297679	1298770	.	+	0	ID=GCA000010485_01285;Name=Linoleoyl-CoA desaturase;locus_tag=GCA000010485_01285;product=Linoleoyl-CoA desaturase;Parent=GCA000010485_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00508,RefSeq:WP_001048211.1,SO:0001217,UniParc:UPI0001C228E1,UniRef:UniRef100_A0A066SSN1,UniRef:UniRef50_A0AAJ2FS24,UniRef:UniRef90_B7LSF5;ec_number=1.14.19.3
contig_1	tRNAscan-SE	gene	1298787	1298871	.	-	.	ID=GCA000010485_01286_gene;locus_tag=GCA000010485_01286;gene=trnY
contig_1	tRNAscan-SE	tRNA	1298787	1298871	.	-	.	ID=GCA000010485_01286;Name=tRNA-Tyr(gta);locus_tag=GCA000010485_01286;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000010485_01286_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	1298905	1298989	.	-	.	ID=GCA000010485_01287_gene;locus_tag=GCA000010485_01287;gene=trnY
contig_1	tRNAscan-SE	tRNA	1298905	1298989	.	-	.	ID=GCA000010485_01287;Name=tRNA-Tyr(gta);locus_tag=GCA000010485_01287;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000010485_01287_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	Pyrodigal	gene	1299149	1299991	.	-	.	ID=GCA000010485_01288_gene;locus_tag=GCA000010485_01288;gene=purU
contig_1	Pyrodigal	CDS	1299149	1299991	.	-	0	ID=GCA000010485_01288;Name=formyltetrahydrofolate deformylase;locus_tag=GCA000010485_01288;product=formyltetrahydrofolate deformylase;Dbxref=GO:0005829,GO:0006164,GO:0006189,GO:0006730,GO:0008864,GO:0034214,GO:0042802;gene=purU;Parent=GCA000010485_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0788,COG:F,RefSeq:WP_000555842.1,SO:0001217,UniParc:UPI0001C228E2,UniRef:UniRef100_A0A066ST10,UniRef:UniRef50_P37051,UniRef:UniRef90_P37051;ec_number=3.5.1.10
contig_1	Pyrodigal	gene	1300041	1300499	.	-	.	ID=GCA000010485_01289_gene;locus_tag=GCA000010485_01289;gene=ychJ
contig_1	Pyrodigal	CDS	1300041	1300499	.	-	0	ID=GCA000010485_01289;Name=YchJ family protein;locus_tag=GCA000010485_01289;product=YchJ family protein;gene=ychJ;Parent=GCA000010485_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3012,COG:S,RefSeq:WP_001311640.1,SO:0001217,UniParc:UPI0001C228E3,UniRef:UniRef100_A0A0C5EM03,UniRef:UniRef50_P37052,UniRef:UniRef90_P37052
contig_1	Pyrodigal	gene	1300573	1301517	.	+	.	ID=GCA000010485_01290_gene;locus_tag=GCA000010485_01290;gene=rssA
contig_1	Pyrodigal	CDS	1300573	1301517	.	+	0	ID=GCA000010485_01290;Name=patatin-like phospholipase RssA;locus_tag=GCA000010485_01290;product=patatin-like phospholipase RssA;Dbxref=GO:0004622,GO:0006629,GO:0016042,GO:0046470;gene=rssA;Parent=GCA000010485_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000190792.1,SO:0001217,UniParc:UPI00000D039F,UniRef:UniRef100_C3TCP7,UniRef:UniRef50_P0AFR0,UniRef:UniRef90_P0AFR0
contig_1	Pyrodigal	gene	1301609	1302622	.	+	.	ID=GCA000010485_01291_gene;locus_tag=GCA000010485_01291;gene=rssB
contig_1	Pyrodigal	CDS	1301609	1302622	.	+	0	ID=GCA000010485_01291;Name=two-component system response regulator RssB;locus_tag=GCA000010485_01291;product=two-component system response regulator RssB;Dbxref=GO:0000160,GO:0010468,GO:0045862;gene=rssB;Parent=GCA000010485_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193451.1,SO:0001217,UniParc:UPI000187BB99,UniRef:UniRef100_E2QLJ4,UniRef:UniRef50_P0AEV1,UniRef:UniRef90_P0AEV1
contig_1	Pyrodigal	gene	1302824	1303732	.	+	.	ID=GCA000010485_01292_gene;locus_tag=GCA000010485_01292;gene=galU
contig_1	Pyrodigal	CDS	1302824	1303732	.	+	0	ID=GCA000010485_01292;Name=UTP--glucose-1-phosphate uridylyltransferase GalU;locus_tag=GCA000010485_01292;product=UTP--glucose-1-phosphate uridylyltransferase GalU;Dbxref=GO:0000287,GO:0003983,GO:0005829,GO:0006011,GO:0009242,GO:0009244,GO:0032991,GO:0033499,GO:0042802,GO:1900727;gene=galU;Parent=GCA000010485_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,KEGG:K00963,RefSeq:WP_000718995.1,SO:0001217,UniParc:UPI00001639AF,UniRef:UniRef100_P0AEP3,UniRef:UniRef50_P0AEP3,UniRef:UniRef90_P0AEP3;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	1303877	1304290	.	-	.	ID=GCA000010485_01293_gene;locus_tag=GCA000010485_01293;gene=hns
contig_1	Pyrodigal	CDS	1303877	1304290	.	-	0	ID=GCA000010485_01293;Name=histone-like nucleoid-structuring protein H-NS;locus_tag=GCA000010485_01293;product=histone-like nucleoid-structuring protein H-NS;Dbxref=GO:0000976,GO:0001217,GO:0003677,GO:0003680,GO:0003681,GO:0005829,GO:0009295,GO:0030527,GO:0032993,GO:0042802,GO:0046983,GO:0071824;gene=hns;Parent=GCA000010485_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG2916,RefSeq:WP_001287378.1,SO:0001217,UniParc:UPI00001639B0,UniRef:UniRef100_P0ACF8,UniRef:UniRef50_P0ACF8,UniRef:UniRef90_P0ACF8
contig_1	Pyrodigal	gene	1304894	1305511	.	+	.	ID=GCA000010485_01294_gene;locus_tag=GCA000010485_01294;gene=tdk
contig_1	Pyrodigal	CDS	1304894	1305511	.	+	0	ID=GCA000010485_01294;Name=thymidine kinase;locus_tag=GCA000010485_01294;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897;gene=tdk;Parent=GCA000010485_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,RefSeq:WP_000068076.1,SO:0001217,UniParc:UPI00000DEB0C,UniRef:UniRef100_Q8FHX4,UniRef:UniRef50_P23331,UniRef:UniRef90_P23331;ec_number=2.7.1.21
contig_1	Pyrodigal	gene	1305639	1306844	.	-	.	ID=GCA000010485_01295_gene;locus_tag=GCA000010485_01295
contig_1	Pyrodigal	CDS	1305639	1306844	.	-	0	ID=GCA000010485_01295;Name=IS4 family transposase;locus_tag=GCA000010485_01295;product=IS4 family transposase;Dbxref=GO:0004803;Parent=GCA000010485_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07495,SO:0001217,UniParc:UPI0001C228E4,UniRef:UniRef100_A0A192CMY5,UniRef:UniRef50_P03835,UniRef:UniRef90_S1Q446
contig_1	Pyrodigal	gene	1306969	1309644	.	-	.	ID=GCA000010485_01296_gene;locus_tag=GCA000010485_01296;gene=adhE
contig_1	Pyrodigal	CDS	1306969	1309644	.	-	0	ID=GCA000010485_01296;Name=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;locus_tag=GCA000010485_01296;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;Dbxref=GO:0004022,GO:0005829,GO:0006066,GO:0006115,GO:0006979,GO:0008198,GO:0008774,GO:0015976,GO:0016020,GO:0016620,GO:0019664,GO:0042802,GO:0046872,GO:0051260;gene=adhE;Parent=GCA000010485_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,KEGG:K04072,RefSeq:WP_000301660.1,SO:0001217,UniParc:UPI00005EF5B2,UniRef:UniRef100_E2QLJ9,UniRef:UniRef50_P0A9Q7,UniRef:UniRef90_P0A9Q7;ec_number=1.2.1.10
contig_1	Bakta	gene	1310037	1310090	.	+	.	ID=GCA000010485_01297_gene;locus_tag=GCA000010485_01297;inference=ab initio prediction:Bakta;gene=ychT
contig_1	Bakta	CDS	1310037	1310090	.	+	0	ID=GCA000010485_01297;Name=Protein YchT;locus_tag=GCA000010485_01297;product=Protein YchT;gene=ychT;Parent=GCA000010485_01297_gene;Note=RefSeq:WP_211180492.1,SO:0001217,UniParc:UPI00045AC6AD,UniRef:UniRef100_P0DSE9,UniRef:UniRef50_P0DSE9,UniRef:UniRef90_P0DSE9
contig_1	Pyrodigal	gene	1310121	1310768	.	+	.	ID=GCA000010485_01298_gene;locus_tag=GCA000010485_01298;gene=ychE
contig_1	Pyrodigal	CDS	1310121	1310768	.	+	0	ID=GCA000010485_01298;Name=NAAT family transporter YchE;locus_tag=GCA000010485_01298;product=NAAT family transporter YchE;Dbxref=GO:0005886,GO:0016020;gene=ychE;Parent=GCA000010485_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000616554,KEGG:K05595,RefSeq:WP_000616554.1,SO:0001217,UniParc:UPI000004F5DF,UniRef:UniRef100_P25743,UniRef:UniRef50_P25743,UniRef:UniRef90_P25743
contig_1	Pyrodigal	gene	1310795	1310950	.	+	.	ID=GCA000010485_01299_gene;locus_tag=GCA000010485_01299
contig_1	Pyrodigal	CDS	1310795	1310950	.	+	0	ID=GCA000010485_01299;Name=Putative IS1 encoded protein;locus_tag=GCA000010485_01299;product=Putative IS1 encoded protein;Parent=GCA000010485_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001297113.1,SO:0001217,UniParc:UPI0001759175,UniRef:UniRef100_J7R0A6,UniRef:UniRef50_I6CPN6,UniRef:UniRef90_J7R0A6
contig_1	Pyrodigal	gene	1310926	1311087	.	-	.	ID=GCA000010485_01300_gene;locus_tag=GCA000010485_01300;pseudogene=unitary
contig_1	Pyrodigal	CDS	1310926	1311087	.	-	0	ID=GCA000010485_01300;Name=hypothetical protein;locus_tag=GCA000010485_01300;product=hypothetical protein;pseudogene=unitary;Parent=GCA000010485_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000051910.1,SO:0001217,UniParc:UPI000176ADD4,UniRef:UniRef100_A0A0D6IHZ5,UniRef:UniRef50_A0A0H3EJ07,UniRef:UniRef50_UPI0025A0046D,UniRef:UniRef90_A0A0H3EJ07,UniRef:UniRef90_UPI001BDD5D0B
contig_1	Pyrodigal	gene	1311461	1313137	.	+	.	ID=GCA000010485_01301_gene;locus_tag=GCA000010485_01301;gene=oppA
contig_1	Pyrodigal	CDS	1311461	1313137	.	+	0	ID=GCA000010485_01301;Name=oligopeptide ABC transporter substrate-binding protein OppA;locus_tag=GCA000010485_01301;product=oligopeptide ABC transporter substrate-binding protein OppA;Dbxref=GO:0006857,GO:0009408,GO:0015031,GO:0015833,GO:0016020,GO:0030288,GO:0043190,GO:0055052,GO:0055085,GO:0061077,GO:0140205,GO:1900750,GO:1904680;gene=oppA;Parent=GCA000010485_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,SO:0001217,UniRef:UniRef50_P23843,UniRef:UniRef90_P23843;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1313223	1314143	.	+	.	ID=GCA000010485_01302_gene;locus_tag=GCA000010485_01302;gene=oppB
contig_1	Pyrodigal	CDS	1313223	1314143	.	+	0	ID=GCA000010485_01302;Name=oligopeptide ABC transporter permease OppB;locus_tag=GCA000010485_01302;product=oligopeptide ABC transporter permease OppB;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0016020,GO:0055085;gene=oppB;Parent=GCA000010485_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000911112.1,SO:0001217,UniParc:UPI0000130D76,UniRef:UniRef100_P0AFH2,UniRef:UniRef50_P0AFH2,UniRef:UniRef90_P0AFH2;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1314158	1315066	.	+	.	ID=GCA000010485_01303_gene;locus_tag=GCA000010485_01303;gene=oppC
contig_1	Pyrodigal	CDS	1314158	1315066	.	+	0	ID=GCA000010485_01303;Name=oligopeptide ABC transporter permease OppC;locus_tag=GCA000010485_01303;product=oligopeptide ABC transporter permease OppC;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0055085;gene=oppC;Parent=GCA000010485_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000979659.1,SO:0001217,UniParc:UPI000000E133,UniRef:UniRef100_E2QLK4,UniRef:UniRef50_P08006,UniRef:UniRef90_P08006;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1315078	1316091	.	+	.	ID=GCA000010485_01304_gene;locus_tag=GCA000010485_01304;gene=oppD
contig_1	Pyrodigal	CDS	1315078	1316091	.	+	0	ID=GCA000010485_01304;Name=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;locus_tag=GCA000010485_01304;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=oppD;Parent=GCA000010485_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000110948,BlastRules:WP_011669112,RefSeq:WP_000110940.1,SO:0001217,UniParc:UPI0001C228E6,UniRef:UniRef100_A0A061KQ96,UniRef:UniRef50_P76027,UniRef:UniRef90_P76027;ec_number=7.4.2.6
contig_1	Pyrodigal	gene	1316088	1317092	.	+	.	ID=GCA000010485_01305_gene;locus_tag=GCA000010485_01305;gene=oppF
contig_1	Pyrodigal	CDS	1316088	1317092	.	+	0	ID=GCA000010485_01305;Name=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;locus_tag=GCA000010485_01305;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;Dbxref=GO:0005524,GO:0015833;gene=oppF;Parent=GCA000010485_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000994906,BlastRules:WP_010906164,COG:COG0444,COG:EP,RefSeq:WP_000994905.1,SO:0001217,UniParc:UPI000000E135,UniRef:UniRef100_C3TCJ2,UniRef:UniRef50_P77737,UniRef:UniRef90_C3TCJ2;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1317145	1317474	.	-	.	ID=GCA000010485_01306_gene;locus_tag=GCA000010485_01306;gene=cls
contig_1	Pyrodigal	CDS	1317145	1317474	.	-	0	ID=GCA000010485_01306;Name=cardiolipin synthase;locus_tag=GCA000010485_01306;product=cardiolipin synthase;Dbxref=GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000010485_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3099,COG:S,KEGG:K06131,RefSeq:WP_000366959.1,SO:0001217,UniParc:UPI000013A6CE,UniRef:UniRef100_P0A8L7,UniRef:UniRef50_P0A6H8,UniRef:UniRef90_P0A8L7;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1317509	1318969	.	-	.	ID=GCA000010485_01307_gene;locus_tag=GCA000010485_01307;gene=clsA
contig_1	Pyrodigal	CDS	1317509	1318969	.	-	0	ID=GCA000010485_01307;Name=cardiolipin synthase ClsA;locus_tag=GCA000010485_01307;product=cardiolipin synthase ClsA;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=clsA;Parent=GCA000010485_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000206886,COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_000214516.1,SO:0001217,UniParc:UPI0000127B9D,UniRef:UniRef100_P0A6H8,UniRef:UniRef50_P0A6H8,UniRef:UniRef90_P0A6H8;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1319340	1320593	.	-	.	ID=GCA000010485_01308_gene;locus_tag=GCA000010485_01308;gene=kch
contig_1	Pyrodigal	CDS	1319340	1320593	.	-	0	ID=GCA000010485_01308;Name=voltage-gated potassium channel protein;locus_tag=GCA000010485_01308;product=voltage-gated potassium channel protein;Dbxref=GO:0005267,GO:0005886,GO:0006813,GO:0032991,GO:0042802;gene=kch;Parent=GCA000010485_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_001531639.1,SO:0001217,UniParc:UPI0001C228E7,UniRef:UniRef100_A0A061YJN7,UniRef:UniRef50_P31069,UniRef:UniRef90_P31069
contig_1	Pyrodigal	gene	1320893	1321189	.	-	.	ID=GCA000010485_01309_gene;locus_tag=GCA000010485_01309;gene=yciI
contig_1	Pyrodigal	CDS	1320893	1321189	.	-	0	ID=GCA000010485_01309;Name=YciI family protein;locus_tag=GCA000010485_01309;product=YciI family protein;Dbxref=GO:0005829;gene=yciI;Parent=GCA000010485_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2350,COG:QR,RefSeq:WP_000967595.1,SO:0001217,UniParc:UPI000013A6C0,UniRef:UniRef100_P0AB55,UniRef:UniRef50_P0AB55,UniRef:UniRef90_P0AB55
contig_1	Pyrodigal	gene	1321413	1322129	.	+	.	ID=GCA000010485_01310_gene;locus_tag=GCA000010485_01310;gene=tonB
contig_1	Pyrodigal	CDS	1321413	1322129	.	+	0	ID=GCA000010485_01310;Name=TonB system transport protein TonB;locus_tag=GCA000010485_01310;product=TonB system transport protein TonB;Dbxref=GO:0005886,GO:0006879,GO:0009279,GO:0015031,GO:0015889,GO:0015891,GO:0016020,GO:0019904,GO:0030003,GO:0030288,GO:0030313,GO:0031992,GO:0042914,GO:0055085,GO:0098002,GO:0098797,GO:1902495;gene=tonB;Parent=GCA000010485_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0810,COG:M,RefSeq:WP_001357407.1,SO:0001217,UniParc:UPI00005EF5B7,UniRef:UniRef100_A0A061LL84,UniRef:UniRef50_P02929,UniRef:UniRef90_P02929
contig_1	Pyrodigal	gene	1322169	1322567	.	-	.	ID=GCA000010485_01311_gene;locus_tag=GCA000010485_01311;gene=yciA
contig_1	Pyrodigal	CDS	1322169	1322567	.	-	0	ID=GCA000010485_01311;Name=acyl-CoA thioester hydrolase YciA;locus_tag=GCA000010485_01311;product=acyl-CoA thioester hydrolase YciA;Dbxref=GO:0005829,GO:0006637,GO:0009062,GO:0016790,GO:0052816;gene=yciA;Parent=GCA000010485_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_000100751.1,SO:0001217,UniParc:UPI0001C229D5,UniRef:UniRef100_A0A066T0W8,UniRef:UniRef50_P0A8Z0,UniRef:UniRef90_P0A8Z0;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	1322672	1323211	.	-	.	ID=GCA000010485_01312_gene;locus_tag=GCA000010485_01312;gene=yciB
contig_1	Pyrodigal	CDS	1322672	1323211	.	-	0	ID=GCA000010485_01312;Name=septation protein A;locus_tag=GCA000010485_01312;product=septation protein A;Dbxref=GO:0005886;gene=yciB;Parent=GCA000010485_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2917,COG:D,RefSeq:WP_000808672.1,SO:0001217,UniParc:UPI000000E96D,UniRef:UniRef100_B7UQE5,UniRef:UniRef50_P0A710,UniRef:UniRef90_P0A710
contig_1	Pyrodigal	gene	1323241	1323984	.	-	.	ID=GCA000010485_01313_gene;locus_tag=GCA000010485_01313;gene=yciC
contig_1	Pyrodigal	CDS	1323241	1323984	.	-	0	ID=GCA000010485_01313;Name=YciC family protein;locus_tag=GCA000010485_01313;product=YciC family protein;Dbxref=GO:0005886;gene=yciC;Parent=GCA000010485_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000028546.1,SO:0001217,UniParc:UPI00005EF5B8,UniRef:UniRef100_B7ML08,UniRef:UniRef50_P21365,UniRef:UniRef90_P21365
contig_1	Pyrodigal	gene	1324340	1324993	.	+	.	ID=GCA000010485_01314_gene;locus_tag=GCA000010485_01314;gene=ompW
contig_1	Pyrodigal	CDS	1324340	1324993	.	+	0	ID=GCA000010485_01314;Name=outer membrane protein OmpW;locus_tag=GCA000010485_01314;product=outer membrane protein OmpW;Dbxref=GO:0019867;gene=ompW;Parent=GCA000010485_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07275,RefSeq:WP_000737209.1,SO:0001217,UniParc:UPI0001C229D6,UniRef:UniRef100_A0A0K5D674,UniRef:UniRef50_P0A915,UniRef:UniRef90_A0A2B7LMS7
contig_1	Pyrodigal	gene	1325044	1325850	.	-	.	ID=GCA000010485_01315_gene;locus_tag=GCA000010485_01315;gene=trpA
contig_1	Pyrodigal	CDS	1325044	1325850	.	-	0	ID=GCA000010485_01315;Name=tryptophan synthase subunit alpha;locus_tag=GCA000010485_01315;product=tryptophan synthase subunit alpha;Dbxref=GO:0000162,GO:0004834,GO:0005829,GO:0006568;gene=trpA;Parent=GCA000010485_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0159,COG:E,KEGG:K01695,RefSeq:WP_000443049.1,SO:0001217,UniParc:UPI0001C229D7,UniRef:UniRef100_A0A641BJ16,UniRef:UniRef50_P0A877,UniRef:UniRef90_P0A877;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1325850	1327043	.	-	.	ID=GCA000010485_01316_gene;locus_tag=GCA000010485_01316;gene=trpB
contig_1	Pyrodigal	CDS	1325850	1327043	.	-	0	ID=GCA000010485_01316;Name=tryptophan synthase subunit beta;locus_tag=GCA000010485_01316;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA000010485_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,RefSeq:WP_000209514.1,SO:0001217,UniParc:UPI0001C229D8,UniRef:UniRef100_UPI0001C229D8,UniRef:UniRef50_P0A879,UniRef:UniRef90_P0A879;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1327055	1328413	.	-	.	ID=GCA000010485_01317_gene;locus_tag=GCA000010485_01317;gene=trpF
contig_1	Pyrodigal	CDS	1327055	1328413	.	-	0	ID=GCA000010485_01317;Name=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;locus_tag=GCA000010485_01317;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpF;Parent=GCA000010485_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0135,COG:E,KEGG:K13498,RefSeq:WP_001195273.1,SO:0001217,UniParc:UPI0001C229D9,UniRef:UniRef100_A0A061YE88,UniRef:UniRef50_P00909,UniRef:UniRef90_Q8X7B7;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1328417	1330012	.	-	.	ID=GCA000010485_01318_gene;locus_tag=GCA000010485_01318;gene=trpD
contig_1	Pyrodigal	CDS	1328417	1330012	.	-	0	ID=GCA000010485_01318;Name=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;locus_tag=GCA000010485_01318;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;Dbxref=GO:0000162,GO:0000287,GO:0002047,GO:0004048,GO:0004049;gene=trpD;Parent=GCA000010485_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,KEGG:K13497,RefSeq:WP_000763536.1,SO:0001217,UniParc:UPI0001C229DA,UniRef:UniRef100_A0A641BKB0,UniRef:UniRef50_P00904,UniRef:UniRef90_P00904;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1330012	1331574	.	-	.	ID=GCA000010485_01319_gene;locus_tag=GCA000010485_01319;gene=trpE
contig_1	Pyrodigal	CDS	1330012	1331574	.	-	0	ID=GCA000010485_01319;Name=anthranilate synthase component I;locus_tag=GCA000010485_01319;product=anthranilate synthase component I;Dbxref=GO:0000162,GO:0004049,GO:0005950,GO:0046872;gene=trpE;Parent=GCA000010485_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_001194645.1,SO:0001217,UniParc:UPI0001C229DB,UniRef:UniRef100_UPI0001C229DB,UniRef:UniRef50_P00898,UniRef:UniRef90_P00895;ec_number=4.1.3.27
contig_1	Infernal	regulatory_region	1331596	1331689	1.2e-15	-	.	ID=EFPPCJGBKI_302;Name=Tryptophan operon leader;product=Tryptophan operon leader;Dbxref=RFAM:RF00513;inference=profile:Rfam:RF00513;Note=SO:0000140;regulatory_class=attenuator
contig_1	Bakta	gene	1331666	1331710	.	-	.	ID=GCA000010485_01320_gene;locus_tag=GCA000010485_01320;inference=ab initio prediction:Bakta;gene=trpL
contig_1	Bakta	CDS	1331666	1331710	.	-	0	ID=GCA000010485_01320;Name=trp operon leader peptide;locus_tag=GCA000010485_01320;product=trp operon leader peptide;Dbxref=GO:0000162;gene=trpL;Parent=GCA000010485_01320_gene;Note=RefSeq:WP_001700591.1,SO:0001217,UniParc:UPI000012E89C,UniRef:UniRef100_P0AD92,UniRef:UniRef50_P0AD92,UniRef:UniRef90_P0AD92
contig_1	Pyrodigal	gene	1331848	1332729	.	+	.	ID=GCA000010485_01321_gene;locus_tag=GCA000010485_01321;gene=yciV
contig_1	Pyrodigal	CDS	1331848	1332729	.	+	0	ID=GCA000010485_01321;Name=5'-3' exoribonuclease;locus_tag=GCA000010485_01321;product=5'-3' exoribonuclease;Dbxref=GO:0000166,GO:0004534,GO:0006364,GO:0035312,GO:0046872,GO:0097657;gene=yciV;Parent=GCA000010485_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000500442,COG:COG0613,COG:F,KEGG:K07053,RefSeq:WP_001285702.1,SO:0001217,UniParc:UPI0001C229DC,UniRef:UniRef100_A0A061K480,UniRef:UniRef50_P77766,UniRef:UniRef90_P77766;ec_number=3.1.3.97
contig_1	Pyrodigal	gene	1332726	1333346	.	+	.	ID=GCA000010485_01322_gene;locus_tag=GCA000010485_01322;gene=yciO
contig_1	Pyrodigal	CDS	1332726	1333346	.	+	0	ID=GCA000010485_01322;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000010485_01322;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=yciO;Parent=GCA000010485_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_001295575.1,SO:0001217,UniParc:UPI000013A6C7,UniRef:UniRef100_P0AFR4,UniRef:UniRef50_P0AFR4,UniRef:UniRef90_P0AFR4;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	1333371	1335269	.	+	.	ID=GCA000010485_01323_gene;locus_tag=GCA000010485_01323;gene=yciQ
contig_1	Pyrodigal	CDS	1333371	1335269	.	+	0	ID=GCA000010485_01323;Name=putative protein YciQ;locus_tag=GCA000010485_01323;product=putative protein YciQ;Dbxref=GO:0005886;gene=yciQ;Parent=GCA000010485_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P45848,UniRef:UniRef90_P45848
contig_1	Pyrodigal	gene	1335482	1336357	.	+	.	ID=GCA000010485_01324_gene;locus_tag=GCA000010485_01324;gene=rluB
contig_1	Pyrodigal	CDS	1335482	1336357	.	+	0	ID=GCA000010485_01324;Name=23S rRNA pseudouridine(2605) synthase RluB;locus_tag=GCA000010485_01324;product=23S rRNA pseudouridine(2605) synthase RluB;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0009982,GO:0160139;gene=rluB;Parent=GCA000010485_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,KEGG:K06178,RefSeq:WP_001291206.1,SO:0001217,UniParc:UPI00000DEB1C,UniRef:UniRef100_Q8FHV4,UniRef:UniRef50_P37765,UniRef:UniRef90_P59815;ec_number=5.4.99.22
contig_1	Pyrodigal	gene	1336527	1337549	.	+	.	ID=GCA000010485_01325_gene;locus_tag=GCA000010485_01325
contig_1	Pyrodigal	CDS	1336527	1337549	.	+	0	ID=GCA000010485_01325;Name=Lipoprotein;locus_tag=GCA000010485_01325;product=Lipoprotein;Parent=GCA000010485_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000622024.1,SO:0001217,UniParc:UPI0001C229DE,UniRef:UniRef100_A0AAC9M470,UniRef:UniRef50_A0A4T2MY54,UniRef:UniRef90_A0A7G6K4P6
contig_1	Pyrodigal	gene	1337559	1337867	.	+	.	ID=GCA000010485_01326_gene;locus_tag=GCA000010485_01326
contig_1	Pyrodigal	CDS	1337559	1337867	.	+	0	ID=GCA000010485_01326;Name=Colicin immunity protein;locus_tag=GCA000010485_01326;product=Colicin immunity protein;Parent=GCA000010485_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001000715.1,SO:0001217,UniParc:UPI0001C229DF,UniRef:UniRef100_A0A061YF54,UniRef:UniRef50_A0A5F1FDE8,UniRef:UniRef90_A0A2S8JNF2
contig_1	Pyrodigal	gene	1337924	1338514	.	-	.	ID=GCA000010485_01327_gene;locus_tag=GCA000010485_01327;gene=cobO
contig_1	Pyrodigal	CDS	1337924	1338514	.	-	0	ID=GCA000010485_01327;Name=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;locus_tag=GCA000010485_01327;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;Dbxref=GO:0005524,GO:0005737,GO:0006779,GO:0008817,GO:0009236,GO:0019250;gene=cobO;Parent=GCA000010485_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2109,COG:H,KEGG:K19221,RefSeq:WP_001278898.1,SO:0001217,UniParc:UPI00005EF5C3,UniRef:UniRef100_A0A066SRS1,UniRef:UniRef50_P0A9H5,UniRef:UniRef90_P0A9H5;ec_number=2.5.1.17
contig_1	Pyrodigal	gene	1338511	1339269	.	-	.	ID=GCA000010485_01328_gene;locus_tag=GCA000010485_01328;gene=yciK
contig_1	Pyrodigal	CDS	1338511	1339269	.	-	0	ID=GCA000010485_01328;Name=YciK family oxidoreductase;locus_tag=GCA000010485_01328;product=YciK family oxidoreductase;Dbxref=GO:0016491;gene=yciK;Parent=GCA000010485_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000559273.1,SO:0001217,UniParc:UPI00000DEB1D,UniRef:UniRef100_A0A061LK84,UniRef:UniRef50_P31808,UniRef:UniRef90_P31808;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1339489	1340538	.	+	.	ID=GCA000010485_01329_gene;locus_tag=GCA000010485_01329;gene=sohB
contig_1	Pyrodigal	CDS	1339489	1340538	.	+	0	ID=GCA000010485_01329;Name=protease SohB;locus_tag=GCA000010485_01329;product=protease SohB;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0008233;gene=sohB;Parent=GCA000010485_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0616,COG:O,KEGG:K04774,RefSeq:WP_000422035.1,SO:0001217,UniParc:UPI00000DEB1E,UniRef:UniRef100_A0A2G9A6J4,UniRef:UniRef50_P0AG14,UniRef:UniRef90_P0AG14;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1340574	1340825	.	-	.	ID=GCA000010485_01330_gene;locus_tag=GCA000010485_01330;gene=yciN
contig_1	Pyrodigal	CDS	1340574	1340825	.	-	0	ID=GCA000010485_01330;Name=YciN family protein;locus_tag=GCA000010485_01330;product=YciN family protein;gene=yciN;Parent=GCA000010485_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001031532.1,SO:0001217,UniParc:UPI0001C229E0,UniRef:UniRef100_A0A7I0KZU2,UniRef:UniRef50_B7LS08,UniRef:UniRef90_B7LS08
contig_1	Pyrodigal	gene	1341205	1343802	.	+	.	ID=GCA000010485_01331_gene;locus_tag=GCA000010485_01331;gene=topA
contig_1	Pyrodigal	CDS	1341205	1343802	.	+	0	ID=GCA000010485_01331;Name=type I DNA topoisomerase;locus_tag=GCA000010485_01331;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872;gene=topA;Parent=GCA000010485_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000513593,COG:COG0551,COG:L,RefSeq:WP_001526939.1,SO:0001217,UniParc:UPI0001C229E1,UniRef:UniRef100_A0A3K0NV49,UniRef:UniRef50_P06612,UniRef:UniRef90_P06612;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1344012	1344986	.	+	.	ID=GCA000010485_01332_gene;locus_tag=GCA000010485_01332;gene=cysB
contig_1	Pyrodigal	CDS	1344012	1344986	.	+	0	ID=GCA000010485_01332;Name=HTH-type transcriptional regulator CysB;locus_tag=GCA000010485_01332;product=HTH-type transcriptional regulator CysB;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0019344;gene=cysB;Parent=GCA000010485_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000776253.1,SO:0001217,UniParc:UPI0000128CC1,UniRef:UniRef100_P0A9F3,UniRef:UniRef50_P0A9F3,UniRef:UniRef90_P0A9F3
contig_1	Pyrodigal	gene	1345316	1345444	.	+	.	ID=GCA000010485_01333_gene;locus_tag=GCA000010485_01333;gene=ymiA
contig_1	Pyrodigal	CDS	1345316	1345444	.	+	0	ID=GCA000010485_01333;Name=YmiA family putative membrane protein;locus_tag=GCA000010485_01333;product=YmiA family putative membrane protein;Dbxref=GO:0005886;gene=ymiA;Parent=GCA000010485_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296034.1,SO:0001217,UniParc:UPI00019AF857,UniRef:UniRef100_A0A066T045,UniRef:UniRef50_P0CB62,UniRef:UniRef90_P0CB62
contig_1	Pyrodigal	gene	1345447	1345614	.	+	.	ID=GCA000010485_01334_gene;locus_tag=GCA000010485_01334
contig_1	Pyrodigal	CDS	1345447	1345614	.	+	0	ID=GCA000010485_01334;Name=Protein%2C C-ter%2C truncated protein;locus_tag=GCA000010485_01334;product=Protein%2C C-ter%2C truncated protein;Parent=GCA000010485_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296035.1,SO:0001217,UniParc:UPI00005EF5C7,UniRef:UniRef100_E2QLN6,UniRef:UniRef50_A0A8S0FUM8,UniRef:UniRef90_A0A8S0FUM8
contig_1	Infernal	gene	1345655	1345867	.	+	.	ID=GCA000010485_01335_gene;locus_tag=GCA000010485_01335;gene=STnc180
contig_1	Infernal	ncRNA	1345655	1345867	2.7e-25	+	.	ID=GCA000010485_01335;Name=Enterobacterial sRNA STnc180;locus_tag=GCA000010485_01335;product=Enterobacterial sRNA STnc180;Dbxref=RFAM:RF02079;Parent=GCA000010485_01335_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02079
contig_1	Pyrodigal	gene	1345973	1348648	.	+	.	ID=GCA000010485_01336_gene;locus_tag=GCA000010485_01336;gene=acnA
contig_1	Pyrodigal	CDS	1345973	1348648	.	+	0	ID=GCA000010485_01336;Name=aconitate hydratase AcnA;locus_tag=GCA000010485_01336;product=aconitate hydratase AcnA;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0005506,GO:0005737,GO:0005829,GO:0006097,GO:0006099,GO:0006101,GO:0006979,GO:0009061,GO:0030350,GO:0046872,GO:0051539;gene=acnA;Parent=GCA000010485_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1048,RefSeq:WP_000099493.1,SO:0001217,UniParc:UPI0001C229E2,UniRef:UniRef100_A0A7I0KQS8,UniRef:UniRef50_P25516,UniRef:UniRef90_P25516;ec_number=4.2.1.3
contig_1	Pyrodigal	gene	1348712	1349302	.	-	.	ID=GCA000010485_01337_gene;locus_tag=GCA000010485_01337;gene=ribA
contig_1	Pyrodigal	CDS	1348712	1349302	.	-	0	ID=GCA000010485_01337;Name=GTP cyclohydrolase-2;locus_tag=GCA000010485_01337;product=GTP cyclohydrolase-2;Dbxref=GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0009231;gene=ribA;Parent=GCA000010485_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,RefSeq:WP_001176294.1,SO:0001217,UniParc:UPI00001A9605,UniRef:UniRef100_B7MLV3,UniRef:UniRef50_P0A7I7,UniRef:UniRef90_P0A7I7;ec_number=3.5.4.25
contig_1	Pyrodigal	gene	1349472	1350236	.	+	.	ID=GCA000010485_01338_gene;locus_tag=GCA000010485_01338;gene=pgpB
contig_1	Pyrodigal	CDS	1349472	1350236	.	+	0	ID=GCA000010485_01338;Name=phosphatidylglycerophosphatase B;locus_tag=GCA000010485_01338;product=phosphatidylglycerophosphatase B;Dbxref=GO:0000810,GO:0004609,GO:0005886,GO:0006655,GO:0008195,GO:0008654,GO:0008962,GO:0009279,GO:0009395,GO:0050380;gene=pgpB;Parent=GCA000010485_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,KEGG:K01096,RefSeq:WP_001256526.1,SO:0001217,UniParc:UPI0001C229E3,UniRef:UniRef100_A0A7I0KQS9,UniRef:UniRef50_P0A924,UniRef:UniRef90_P0A924;ec_number=3.1.3.27
contig_1	Pyrodigal	gene	1350385	1350693	.	+	.	ID=GCA000010485_01339_gene;locus_tag=GCA000010485_01339;gene=lapA
contig_1	Pyrodigal	CDS	1350385	1350693	.	+	0	ID=GCA000010485_01339;Name=lipopolysaccharide assembly protein LapA;locus_tag=GCA000010485_01339;product=lipopolysaccharide assembly protein LapA;Dbxref=GO:0005886,GO:0008653;gene=lapA;Parent=GCA000010485_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876286,RefSeq:WP_000876284.1,SO:0001217,UniParc:UPI00016A2297,UniRef:UniRef100_A0A023KWE5,UniRef:UniRef50_P0ACV4,UniRef:UniRef90_P0ACV4
contig_1	Pyrodigal	gene	1350700	1351869	.	+	.	ID=GCA000010485_01340_gene;locus_tag=GCA000010485_01340;gene=lapB
contig_1	Pyrodigal	CDS	1350700	1351869	.	+	0	ID=GCA000010485_01340;Name=lipopolysaccharide assembly protein LapB;locus_tag=GCA000010485_01340;product=lipopolysaccharide assembly protein LapB;Dbxref=GO:0005506,GO:0005515,GO:0005829,GO:0005886,GO:0008653,GO:0009898,GO:0046872,GO:0046890;gene=lapB;Parent=GCA000010485_01340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2956,COG:M,RefSeq:WP_000891346.1,SO:0001217,UniParc:UPI0001C229E4,UniRef:UniRef100_A0A3K2RJE6,UniRef:UniRef50_P0AB58,UniRef:UniRef90_P0AB58
contig_1	Pyrodigal	gene	1352001	1352798	.	+	.	ID=GCA000010485_01341_gene;locus_tag=GCA000010485_01341;gene=pyrF
contig_1	Pyrodigal	CDS	1352001	1352798	.	+	0	ID=GCA000010485_01341;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000010485_01341;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0005829,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA000010485_01341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,SO:0001217,UniRef:UniRef50_P08244,UniRef:UniRef90_P08244;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1352798	1353124	.	+	.	ID=GCA000010485_01342_gene;locus_tag=GCA000010485_01342;gene=yciH
contig_1	Pyrodigal	CDS	1352798	1353124	.	+	0	ID=GCA000010485_01342;Name=stress response translation initiation inhibitor YciH;locus_tag=GCA000010485_01342;product=stress response translation initiation inhibitor YciH;gene=yciH;Parent=GCA000010485_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0023,COG:J,RefSeq:WP_001353236.1,SO:0001217,UniParc:UPI00016A2295,UniRef:UniRef100_A0A086TVH2,UniRef:UniRef50_P08245,UniRef:UniRef90_Q32GQ1
contig_1	Pyrodigal	gene	1353250	1353468	.	-	.	ID=GCA000010485_01343_gene;locus_tag=GCA000010485_01343;gene=osmB
contig_1	Pyrodigal	CDS	1353250	1353468	.	-	0	ID=GCA000010485_01343;Name=osmotically-inducible lipoprotein OsmB;locus_tag=GCA000010485_01343;product=osmotically-inducible lipoprotein OsmB;Dbxref=GO:0005886,GO:0019867;gene=osmB;Parent=GCA000010485_01343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000498253.1,SO:0001217,UniParc:UPI0000130EBC,UniRef:UniRef100_P0ADA7,UniRef:UniRef50_P0ADA7,UniRef:UniRef90_P0ADA7
contig_1	Pyrodigal	gene	1353737	1354486	.	-	.	ID=GCA000010485_01344_gene;locus_tag=GCA000010485_01344;gene=yciT
contig_1	Pyrodigal	CDS	1353737	1354486	.	-	0	ID=GCA000010485_01344;Name=DNA-binding transcriptional regulator YciT;locus_tag=GCA000010485_01344;product=DNA-binding transcriptional regulator YciT;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0006974;gene=yciT;Parent=GCA000010485_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_001088623.1,SO:0001217,UniParc:UPI0000DACE25,UniRef:UniRef100_E2QLP5,UniRef:UniRef50_P76034,UniRef:UniRef90_P76034
contig_1	Pyrodigal	gene	1354575	1354748	.	-	.	ID=GCA000010485_01345_gene;locus_tag=GCA000010485_01345;gene=yciZ
contig_1	Pyrodigal	CDS	1354575	1354748	.	-	0	ID=GCA000010485_01345;Name=UPF0509 protein YciZ;locus_tag=GCA000010485_01345;product=UPF0509 protein YciZ;gene=yciZ;Parent=GCA000010485_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001288368.1,SO:0001217,UniParc:UPI00000DEB2C,UniRef:UniRef100_A5A614,UniRef:UniRef50_A5A614,UniRef:UniRef90_A5A614
contig_1	Pyrodigal	gene	1354896	1356881	.	-	.	ID=GCA000010485_01346_gene;locus_tag=GCA000010485_01346;gene=pdeR
contig_1	Pyrodigal	CDS	1354896	1356881	.	-	0	ID=GCA000010485_01346;Name=cyclic di-GMP phosphodiesterase;locus_tag=GCA000010485_01346;product=cyclic di-GMP phosphodiesterase;Dbxref=GO:0005525,GO:0010608,GO:0071111;gene=pdeR;Parent=GCA000010485_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000859936.1,SO:0001217,UniParc:UPI0001C229E7,UniRef:UniRef100_A0A066SVC3,UniRef:UniRef50_P77334,UniRef:UniRef90_P77334;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	1357115	1359049	.	-	.	ID=GCA000010485_01347_gene;locus_tag=GCA000010485_01347;gene=rnb
contig_1	Pyrodigal	CDS	1357115	1359049	.	-	0	ID=GCA000010485_01347;Name=exoribonuclease II;locus_tag=GCA000010485_01347;product=exoribonuclease II;Dbxref=GO:0003723,GO:0005829,GO:0006401,GO:0006402,GO:0008859;gene=rnb;Parent=GCA000010485_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4776,COG:K,RefSeq:WP_000485012.1,SO:0001217,UniParc:UPI00000DEB2E,UniRef:UniRef100_Q8FHT6,UniRef:UniRef50_P30850,UniRef:UniRef90_P30850;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	1359117	1360244	.	-	.	ID=GCA000010485_01348_gene;locus_tag=GCA000010485_01348;gene=yciW
contig_1	Pyrodigal	CDS	1359117	1360244	.	-	0	ID=GCA000010485_01348;Name=putative protein YciW;locus_tag=GCA000010485_01348;product=putative protein YciW;gene=yciW;Parent=GCA000010485_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545964.1,SO:0001217,UniParc:UPI0001C22AB7,UniRef:UniRef100_A0A7I0KQR8,UniRef:UniRef50_P76035,UniRef:UniRef90_P76035
contig_1	Pyrodigal	gene	1360389	1361177	.	-	.	ID=GCA000010485_01349_gene;locus_tag=GCA000010485_01349;gene=fabI
contig_1	Pyrodigal	CDS	1360389	1361177	.	-	0	ID=GCA000010485_01349;Name=enoyl-ACP reductase FabI;locus_tag=GCA000010485_01349;product=enoyl-ACP reductase FabI;Dbxref=GO:0004318,GO:0009102,GO:0030497,GO:0042802,GO:0046677;gene=fabI;Parent=GCA000010485_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_000506492.1,SO:0001217,UniParc:UPI00000DEB30,UniRef:UniRef100_E2QLQ0,UniRef:UniRef50_P0AEK4,UniRef:UniRef90_P0AEK4;ec_number=1.3.1.9
contig_1	Pyrodigal	gene	1361655	1362221	.	+	.	ID=GCA000010485_01350_gene;locus_tag=GCA000010485_01350
contig_1	Pyrodigal	CDS	1361655	1362221	.	+	0	ID=GCA000010485_01350;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_01350;product=Helix-turn-helix domain-containing protein;Parent=GCA000010485_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000202113.1,SO:0001217,UniParc:UPI00016A228E,UniRef:UniRef100_A0A023KMF6,UniRef:UniRef50_A0A023KMF6,UniRef:UniRef90_A0A023KMF6
contig_1	Pyrodigal	gene	1362370	1363491	.	+	.	ID=GCA000010485_01351_gene;locus_tag=GCA000010485_01351;gene=mexA
contig_1	Pyrodigal	CDS	1362370	1363491	.	+	0	ID=GCA000010485_01351;Name=Multidrug resistance protein MexA;locus_tag=GCA000010485_01351;product=Multidrug resistance protein MexA;gene=mexA;Parent=GCA000010485_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000873803.1,SO:0001217,UniParc:UPI0000DACE26,UniRef:UniRef100_A0A067HJU0,UniRef:UniRef50_A0A2I5T6R7,UniRef:UniRef90_A0A370V7U5
contig_1	Pyrodigal	gene	1363491	1366598	.	+	.	ID=GCA000010485_01352_gene;locus_tag=GCA000010485_01352;gene=acrB
contig_1	Pyrodigal	CDS	1363491	1366598	.	+	0	ID=GCA000010485_01352;Name=Efflux pump membrane transporter;locus_tag=GCA000010485_01352;product=Efflux pump membrane transporter;gene=acrB;Parent=GCA000010485_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_000492807.1,SO:0001217,UniParc:UPI0001C22AB8,UniRef:UniRef100_A0A066SRE3,UniRef:UniRef50_A0A917C9A1,UniRef:UniRef90_A0A0J2BUR4
contig_1	Pyrodigal	gene	1366602	1367975	.	+	.	ID=GCA000010485_01353_gene;locus_tag=GCA000010485_01353
contig_1	Pyrodigal	CDS	1366602	1367975	.	+	0	ID=GCA000010485_01353;Name=Efflux transporter outer membrane subunit;locus_tag=GCA000010485_01353;product=Efflux transporter outer membrane subunit;Parent=GCA000010485_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000946226.1,SO:0001217,UniParc:UPI00005EF5D1,UniRef:UniRef100_E2QLQ4,UniRef:UniRef50_A0A330S0A4,UniRef:UniRef90_A0A6L9AA49
contig_1	Pyrodigal	gene	1367984	1369147	.	+	.	ID=GCA000010485_01354_gene;locus_tag=GCA000010485_01354
contig_1	Pyrodigal	CDS	1367984	1369147	.	+	0	ID=GCA000010485_01354;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000010485_01354;product=Bcr/CflA family efflux transporter;Parent=GCA000010485_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000135013.1,SO:0001217,UniParc:UPI0001C22AB9,UniRef:UniRef100_A0A061K2L0,UniRef:UniRef50_A0A2V2LRA0,UniRef:UniRef90_A0A061K2L0
contig_1	Pyrodigal	gene	1369195	1370001	.	-	.	ID=GCA000010485_01355_gene;locus_tag=GCA000010485_01355;gene=sapF
contig_1	Pyrodigal	CDS	1369195	1370001	.	-	0	ID=GCA000010485_01355;Name=peptide ABC transporter ATP-binding protein SapF;locus_tag=GCA000010485_01355;product=peptide ABC transporter ATP-binding protein SapF;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887,GO:0055085;gene=sapF;Parent=GCA000010485_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000230462,COG:COG4167,COG:V,RefSeq:WP_000573407.1,SO:0001217,UniParc:UPI0000135555,UniRef:UniRef100_P0AAH8,UniRef:UniRef50_P0AAH8,UniRef:UniRef90_P0AAH8;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1370003	1370995	.	-	.	ID=GCA000010485_01356_gene;locus_tag=GCA000010485_01356;gene=sapD
contig_1	Pyrodigal	CDS	1370003	1370995	.	-	0	ID=GCA000010485_01356;Name=peptide ABC transporter ATP-binding protein SapD;locus_tag=GCA000010485_01356;product=peptide ABC transporter ATP-binding protein SapD;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=sapD;Parent=GCA000010485_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001128868,COG:COG4170,COG:V,RefSeq:WP_001128858.1,SO:0001217,UniParc:UPI0000135551,UniRef:UniRef100_P0AAH4,UniRef:UniRef50_P0AAH4,UniRef:UniRef90_P0AAH4;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1370995	1371885	.	-	.	ID=GCA000010485_01357_gene;locus_tag=GCA000010485_01357;gene=sapC
contig_1	Pyrodigal	CDS	1370995	1371885	.	-	0	ID=GCA000010485_01357;Name=putrescine export ABC transporter permease SapC;locus_tag=GCA000010485_01357;product=putrescine export ABC transporter permease SapC;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0016020,GO:0055085;gene=sapC;Parent=GCA000010485_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4171,COG:V,KEGG:K19228,RefSeq:WP_001146163.1,SO:0001217,UniParc:UPI000013554E,UniRef:UniRef100_P0AGH5,UniRef:UniRef50_P0AGH5,UniRef:UniRef90_P0AGH5
contig_1	Pyrodigal	gene	1371872	1372837	.	-	.	ID=GCA000010485_01358_gene;locus_tag=GCA000010485_01358;gene=sapB
contig_1	Pyrodigal	CDS	1371872	1372837	.	-	0	ID=GCA000010485_01358;Name=putrescine export ABC transporter permease SapB;locus_tag=GCA000010485_01358;product=putrescine export ABC transporter permease SapB;Dbxref=GO:0005886,GO:0015489,GO:0015833,GO:0015847,GO:0016020,GO:0055052,GO:0055085,GO:0071916;gene=sapB;Parent=GCA000010485_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4168,COG:V,KEGG:K19227,RefSeq:WP_000583271.1,SO:0001217,UniParc:UPI0001C22ABA,UniRef:UniRef100_A0A066SRP7,UniRef:UniRef50_P0AGH3,UniRef:UniRef90_P0AGH3;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1372834	1374477	.	-	.	ID=GCA000010485_01359_gene;locus_tag=GCA000010485_01359;gene=sapA
contig_1	Pyrodigal	CDS	1372834	1374477	.	-	0	ID=GCA000010485_01359;Name=ABC transporter substrate-binding protein SapA;locus_tag=GCA000010485_01359;product=ABC transporter substrate-binding protein SapA;Dbxref=GO:0015833,GO:0016020,GO:0030288,GO:0043190,GO:0055052,GO:0055085,GO:1904680;gene=sapA;Parent=GCA000010485_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19226,RefSeq:WP_001250202.1,SO:0001217,UniParc:UPI00000E49EA,UniRef:UniRef100_E2QLR0,UniRef:UniRef50_P36634,UniRef:UniRef90_Q47622
contig_1	Pyrodigal	gene	1374790	1375035	.	-	.	ID=GCA000010485_01360_gene;locus_tag=GCA000010485_01360;gene=ymjA
contig_1	Pyrodigal	CDS	1374790	1375035	.	-	0	ID=GCA000010485_01360;Name=putative protein YmjA;locus_tag=GCA000010485_01360;product=putative protein YmjA;Dbxref=GO:0005829;gene=ymjA;Parent=GCA000010485_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001015113.1,SO:0001217,UniParc:UPI0001C22ABB,UniRef:UniRef100_A0A061K4B3,UniRef:UniRef50_P0ACV8,UniRef:UniRef90_P0ACV8
contig_1	Pyrodigal	gene	1375460	1376437	.	-	.	ID=GCA000010485_01361_gene;locus_tag=GCA000010485_01361;gene=pspF
contig_1	Pyrodigal	CDS	1375460	1376437	.	-	0	ID=GCA000010485_01361;Name=phage shock protein operon transcriptional activator;locus_tag=GCA000010485_01361;product=phage shock protein operon transcriptional activator;Dbxref=GO:0000160,GO:0003677,GO:0005524,GO:0005667,GO:0005737,GO:0006355,GO:0016887,GO:0042802,GO:0043565,GO:0045892,GO:0045893,GO:0080135;gene=pspF;Parent=GCA000010485_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1221,COG:KT,RefSeq:WP_001296037.1,SO:0001217,UniParc:UPI0001E1820B,UniRef:UniRef100_A0A066SVB1,UniRef:UniRef50_P37344,UniRef:UniRef90_P37344
contig_1	Pyrodigal	gene	1376604	1377272	.	+	.	ID=GCA000010485_01362_gene;locus_tag=GCA000010485_01362;gene=pspA
contig_1	Pyrodigal	CDS	1376604	1377272	.	+	0	ID=GCA000010485_01362;Name=phage shock protein PspA;locus_tag=GCA000010485_01362;product=phage shock protein PspA;Dbxref=GO:0005829,GO:0005886,GO:0009271;gene=pspA;Parent=GCA000010485_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1842,COG:TV,KEGG:K03969,RefSeq:WP_000511017.1,SO:0001217,UniParc:UPI00016A2057,UniRef:UniRef100_E2QLR3,UniRef:UniRef50_P0AFM6,UniRef:UniRef90_P0AFM6
contig_1	Pyrodigal	gene	1377326	1377550	.	+	.	ID=GCA000010485_01363_gene;locus_tag=GCA000010485_01363;gene=pspB
contig_1	Pyrodigal	CDS	1377326	1377550	.	+	0	ID=GCA000010485_01363;Name=envelope stress response membrane protein PspB;locus_tag=GCA000010485_01363;product=envelope stress response membrane protein PspB;Dbxref=GO:0005886,GO:0006355,GO:0009271,GO:0080135;gene=pspB;Parent=GCA000010485_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001274963.1,SO:0001217,UniParc:UPI00001327F5,UniRef:UniRef100_P0AFM9,UniRef:UniRef50_P0AFM9,UniRef:UniRef90_P0AFM9
contig_1	Pyrodigal	gene	1377550	1377909	.	+	.	ID=GCA000010485_01364_gene;locus_tag=GCA000010485_01364;gene=pspC
contig_1	Pyrodigal	CDS	1377550	1377909	.	+	0	ID=GCA000010485_01364;Name=envelope stress response membrane protein PspC;locus_tag=GCA000010485_01364;product=envelope stress response membrane protein PspC;Dbxref=GO:0005886;gene=pspC;Parent=GCA000010485_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1983,COG:KT,KEGG:K03973,RefSeq:WP_000907387.1,SO:0001217,UniParc:UPI00001327FB,UniRef:UniRef100_P0AFN2,UniRef:UniRef50_P0AFN2,UniRef:UniRef90_P0AFN2
contig_1	Pyrodigal	gene	1377918	1378139	.	+	.	ID=GCA000010485_01365_gene;locus_tag=GCA000010485_01365;gene=pspD
contig_1	Pyrodigal	CDS	1377918	1378139	.	+	0	ID=GCA000010485_01365;Name=phage shock protein PspD;locus_tag=GCA000010485_01365;product=phage shock protein PspD;Dbxref=GO:0005737,GO:0005886,GO:0009271;gene=pspD;Parent=GCA000010485_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03971,RefSeq:WP_001295585.1,SO:0001217,UniParc:UPI0000132802,UniRef:UniRef100_P0AFV8,UniRef:UniRef50_P0AFV8,UniRef:UniRef90_P0AFV8
contig_1	Pyrodigal	gene	1378214	1378528	.	+	.	ID=GCA000010485_01366_gene;locus_tag=GCA000010485_01366;gene=pspE
contig_1	Pyrodigal	CDS	1378214	1378528	.	+	0	ID=GCA000010485_01366;Name=thiosulfate sulfurtransferase PspE;locus_tag=GCA000010485_01366;product=thiosulfate sulfurtransferase PspE;Dbxref=GO:0004792,GO:0030288,GO:0042597;gene=pspE;Parent=GCA000010485_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_000473128.1,SO:0001217,UniParc:UPI00005EF5D7,UniRef:UniRef100_E2QLR7,UniRef:UniRef50_P23857,UniRef:UniRef90_P23857;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	1378739	1380418	.	+	.	ID=GCA000010485_01367_gene;locus_tag=GCA000010485_01367;gene=ycjM
contig_1	Pyrodigal	CDS	1378739	1380418	.	+	0	ID=GCA000010485_01367;Name=glucosylglycerate phosphorylase;locus_tag=GCA000010485_01367;product=glucosylglycerate phosphorylase;Dbxref=GO:0005975,GO:0110068;gene=ycjM;Parent=GCA000010485_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000810499,RefSeq:WP_001296038.1,SO:0001217,UniParc:UPI0002A3DC0F,UniRef:UniRef100_A0A066SRN8,UniRef:UniRef50_P76041,UniRef:UniRef90_P76041;ec_number=2.4.1.352
contig_1	Pyrodigal	gene	1380432	1381724	.	+	.	ID=GCA000010485_01368_gene;locus_tag=GCA000010485_01368
contig_1	Pyrodigal	CDS	1380432	1381724	.	+	0	ID=GCA000010485_01368;Name=ABC transporter substrate-binding protein;locus_tag=GCA000010485_01368;product=ABC transporter substrate-binding protein;Parent=GCA000010485_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000597419.1,SO:0001217,UniParc:UPI0001C22ABE,UniRef:UniRef100_UPI0001C22ABE,UniRef:UniRef50_P76042,UniRef:UniRef90_UPI0001C22ABE
contig_1	Pyrodigal	gene	1381745	1382626	.	+	.	ID=GCA000010485_01369_gene;locus_tag=GCA000010485_01369;gene=ycjO
contig_1	Pyrodigal	CDS	1381745	1382626	.	+	0	ID=GCA000010485_01369;Name=Inner membrane ABC transporter permease protein YcjO;locus_tag=GCA000010485_01369;product=Inner membrane ABC transporter permease protein YcjO;Dbxref=GO:0005886,GO:0055085;gene=ycjO;Parent=GCA000010485_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080790.1,SO:0001217,UniParc:UPI000013A6DF,UniRef:UniRef100_P0AFR7,UniRef:UniRef50_P0AFR7,UniRef:UniRef90_P0AFR7
contig_1	Pyrodigal	gene	1382613	1383455	.	+	.	ID=GCA000010485_01370_gene;locus_tag=GCA000010485_01370;gene=ycjP
contig_1	Pyrodigal	CDS	1382613	1383455	.	+	0	ID=GCA000010485_01370;Name=Inner membrane ABC transporter permease protein YcjP;locus_tag=GCA000010485_01370;product=Inner membrane ABC transporter permease protein YcjP;Dbxref=GO:0005886,GO:0016020,GO:0055052,GO:0055085;gene=ycjP;Parent=GCA000010485_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0395,COG:G,RefSeq:WP_000224675.1,SO:0001217,UniParc:UPI00000DEB3E,UniRef:UniRef100_C3TBN7,UniRef:UniRef50_P77716,UniRef:UniRef90_P77716
contig_1	Pyrodigal	gene	1383486	1384538	.	+	.	ID=GCA000010485_01371_gene;locus_tag=GCA000010485_01371;gene=ycjQ
contig_1	Pyrodigal	CDS	1383486	1384538	.	+	0	ID=GCA000010485_01371;Name=D-guloside 3-dehydrogenase;locus_tag=GCA000010485_01371;product=D-guloside 3-dehydrogenase;Dbxref=GO:0016491,GO:0046872;gene=ycjQ;Parent=GCA000010485_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000737321.1,SO:0001217,UniParc:UPI0001C22ABF,UniRef:UniRef100_UPI0001C22ABF,UniRef:UniRef50_P76043,UniRef:UniRef90_P76043;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	1384557	1385345	.	+	.	ID=GCA000010485_01372_gene;locus_tag=GCA000010485_01372;gene=ycjR
contig_1	Pyrodigal	CDS	1384557	1385345	.	+	0	ID=GCA000010485_01372;Name=3-dehydro-D-guloside 4-epimerase;locus_tag=GCA000010485_01372;product=3-dehydro-D-guloside 4-epimerase;Dbxref=GO:0005829,GO:0016857,GO:0030145,GO:0042802;gene=ycjR;Parent=GCA000010485_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,RefSeq:WP_001545967.1,SO:0001217,UniParc:UPI0001C22AC0,UniRef:UniRef100_A0A7I0KQU5,UniRef:UniRef50_P76044,UniRef:UniRef90_P76044;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	1385355	1386410	.	+	.	ID=GCA000010485_01373_gene;locus_tag=GCA000010485_01373;gene=ycjS
contig_1	Pyrodigal	CDS	1385355	1386410	.	+	0	ID=GCA000010485_01373;Name=D-glucoside 3-dehydrogenase;locus_tag=GCA000010485_01373;product=D-glucoside 3-dehydrogenase;Dbxref=GO:0000166,GO:0016616;gene=ycjS;Parent=GCA000010485_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000833576.1,SO:0001217,UniParc:UPI0000D508E4,UniRef:UniRef100_A0A0D6IKX3,UniRef:UniRef50_P77503,UniRef:UniRef90_P77503;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	1386407	1388674	.	+	.	ID=GCA000010485_01374_gene;locus_tag=GCA000010485_01374;gene=ycjT
contig_1	Pyrodigal	CDS	1386407	1388674	.	+	0	ID=GCA000010485_01374;Name=kojibiose phosphorylase;locus_tag=GCA000010485_01374;product=kojibiose phosphorylase;Dbxref=GO:0004553,GO:0005975,GO:0030246,GO:0033831;gene=ycjT;Parent=GCA000010485_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000198036,KEGG:K10231,RefSeq:WP_000198023.1,SO:0001217,UniParc:UPI0001C22AC1,UniRef:UniRef100_A0A7I0L0M1,UniRef:UniRef50_P77154,UniRef:UniRef90_P77154;ec_number=2.4.1.230
contig_1	Pyrodigal	gene	1388671	1389330	.	+	.	ID=GCA000010485_01375_gene;locus_tag=GCA000010485_01375;gene=pgmB
contig_1	Pyrodigal	CDS	1388671	1389330	.	+	0	ID=GCA000010485_01375;Name=beta-phosphoglucomutase;locus_tag=GCA000010485_01375;product=beta-phosphoglucomutase;Dbxref=GO:0000287,GO:0005975,GO:0008801;gene=pgmB;Parent=GCA000010485_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000775774.1,SO:0001217,UniParc:UPI0001C22AC2,UniRef:UniRef100_A0A7I0KQV0,UniRef:UniRef50_P77366,UniRef:UniRef90_A0A066R5B8;ec_number=5.4.2.6
contig_1	Pyrodigal	gene	1389344	1390426	.	+	.	ID=GCA000010485_01376_gene;locus_tag=GCA000010485_01376;gene=ycjV
contig_1	Pyrodigal	CDS	1389344	1390426	.	+	0	ID=GCA000010485_01376;Name=putative ABC transporter ATP-binding protein YcjV;locus_tag=GCA000010485_01376;product=putative ABC transporter ATP-binding protein YcjV;Dbxref=GO:0005524,GO:0008643,GO:0016887,GO:0055052,GO:0140359;gene=ycjV;Parent=GCA000010485_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000068007.1,SO:0001217,UniParc:UPI0001C22AC3,UniRef:UniRef100_A0A7I0KQS2,UniRef:UniRef50_P77481,UniRef:UniRef90_P77481
contig_1	Pyrodigal	gene	1390471	1391376	.	+	.	ID=GCA000010485_01377_gene;locus_tag=GCA000010485_01377;gene=ompG
contig_1	Pyrodigal	CDS	1390471	1391376	.	+	0	ID=GCA000010485_01377;Name=monomeric porin OmpG;locus_tag=GCA000010485_01377;product=monomeric porin OmpG;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0015478,GO:0015481,GO:0034219,GO:0046930;gene=ompG;Parent=GCA000010485_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000735257,KEGG:K14053,RefSeq:WP_001545968.1,SO:0001217,UniParc:UPI0001C22AC4,UniRef:UniRef100_A0A7I0KS55,UniRef:UniRef50_P76045,UniRef:UniRef90_P76045
contig_1	Pyrodigal	gene	1391427	1392425	.	-	.	ID=GCA000010485_01378_gene;locus_tag=GCA000010485_01378;gene=ycjW
contig_1	Pyrodigal	CDS	1391427	1392425	.	-	0	ID=GCA000010485_01378;Name=putative HTH-type transcriptional regulator YcjW;locus_tag=GCA000010485_01378;product=putative HTH-type transcriptional regulator YcjW;Dbxref=GO:0000976,GO:0003700,GO:0006351,GO:0006355,GO:0006974,GO:0045892;gene=ycjW;Parent=GCA000010485_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000075392.1,SO:0001217,UniParc:UPI0001C22AC5,UniRef:UniRef100_A0A061YHE9,UniRef:UniRef50_P77615,UniRef:UniRef90_P77615
contig_1	Pyrodigal	gene	1392581	1393978	.	+	.	ID=GCA000010485_01379_gene;locus_tag=GCA000010485_01379;gene=ycjX
contig_1	Pyrodigal	CDS	1392581	1393978	.	+	0	ID=GCA000010485_01379;Name=Ras-like GTPase YcjX;locus_tag=GCA000010485_01379;product=Ras-like GTPase YcjX;Dbxref=GO:0003924,GO:0005525,GO:0019003;gene=ycjX;Parent=GCA000010485_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3106,COG:T,RefSeq:WP_001296040.1,SO:0001217,UniParc:UPI0001C22AC6,UniRef:UniRef100_A0A066SZ89,UniRef:UniRef50_P76046,UniRef:UniRef90_P76046;ec_number=3.6.5.2
contig_1	Pyrodigal	gene	1393975	1395036	.	+	.	ID=GCA000010485_01380_gene;locus_tag=GCA000010485_01380;gene=ycjF
contig_1	Pyrodigal	CDS	1393975	1395036	.	+	0	ID=GCA000010485_01380;Name=UPF0283 membrane protein YcjF;locus_tag=GCA000010485_01380;product=UPF0283 membrane protein YcjF;Dbxref=GO:0005886;gene=ycjF;Parent=GCA000010485_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3768,COG:S,RefSeq:WP_000138728.1,SO:0001217,UniParc:UPI000013A6D7,UniRef:UniRef100_P0A8R7,UniRef:UniRef50_P0A8R7,UniRef:UniRef90_P0A8R7
contig_1	Pyrodigal	gene	1395184	1396725	.	+	.	ID=GCA000010485_01381_gene;locus_tag=GCA000010485_01381;gene=tyrR
contig_1	Pyrodigal	CDS	1395184	1396725	.	+	0	ID=GCA000010485_01381;Name=transcriptional regulator TyrR;locus_tag=GCA000010485_01381;product=transcriptional regulator TyrR;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006355,GO:0008134,GO:0009056,GO:0016887;gene=tyrR;Parent=GCA000010485_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3283,COG:KE,RefSeq:WP_001296041.1,SO:0001217,UniParc:UPI00005EF5E3,UniRef:UniRef100_A0A061YB38,UniRef:UniRef50_P07604,UniRef:UniRef90_P07604
contig_1	Pyrodigal	gene	1396769	1397275	.	-	.	ID=GCA000010485_01382_gene;locus_tag=GCA000010485_01382;gene=tpx
contig_1	Pyrodigal	CDS	1396769	1397275	.	-	0	ID=GCA000010485_01382;Name=thiol peroxidase;locus_tag=GCA000010485_01382;product=thiol peroxidase;Dbxref=GO:0005829,GO:0008379,GO:0016684,GO:0032843,GO:0034599,GO:0042597;gene=tpx;Parent=GCA000010485_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_000084387.1,SO:0001217,UniParc:UPI00000480C8,UniRef:UniRef100_P0A862,UniRef:UniRef50_P0A862,UniRef:UniRef90_P0A862;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1397394	1398359	.	+	.	ID=GCA000010485_01383_gene;locus_tag=GCA000010485_01383;gene=ycjG
contig_1	Pyrodigal	CDS	1397394	1398359	.	+	0	ID=GCA000010485_01383;Name=L-Ala-D/L-Glu epimerase;locus_tag=GCA000010485_01383;product=L-Ala-D/L-Glu epimerase;Dbxref=GO:0009063,GO:0016855;gene=ycjG;Parent=GCA000010485_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,RefSeq:WP_001261210.1,SO:0001217,UniParc:UPI00005EF5E4,UniRef:UniRef100_A0A067HSM2,UniRef:UniRef50_P51981,UniRef:UniRef90_Q32GK8;ec_number=5.1.1.20
contig_1	Pyrodigal	gene	1398334	1399062	.	-	.	ID=GCA000010485_01384_gene;locus_tag=GCA000010485_01384
contig_1	Pyrodigal	CDS	1398334	1399062	.	-	0	ID=GCA000010485_01384;Name=Murein peptide amidase A;locus_tag=GCA000010485_01384;product=Murein peptide amidase A;Parent=GCA000010485_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296042.1,SO:0001217,UniParc:UPI0000E44F82,UniRef:UniRef100_A0A061YIH5,UniRef:UniRef90_P0ACV6
contig_1	Pyrodigal	gene	1399353	1399991	.	-	.	ID=GCA000010485_01385_gene;locus_tag=GCA000010485_01385
contig_1	Pyrodigal	CDS	1399353	1399991	.	-	0	ID=GCA000010485_01385;Name=NAD(P)-binding domain-containing protein;locus_tag=GCA000010485_01385;product=NAD(P)-binding domain-containing protein;Parent=GCA000010485_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000800177.1,SO:0001217,UniParc:UPI00005EF5E6,UniRef:UniRef100_A0A0K4J9K5,UniRef:UniRef50_A0A446CXD5,UniRef:UniRef90_A0A5Q5A5H6
contig_1	Bakta	gene	1399988	1400062	.	-	.	ID=GCA000010485_01386_gene;locus_tag=GCA000010485_01386;inference=ab initio prediction:Bakta;gene=ycjY
contig_1	Bakta	CDS	1399988	1400062	.	-	0	ID=GCA000010485_01386;Name=putative protein YcjY;locus_tag=GCA000010485_01386;product=putative protein YcjY;Dbxref=GO:0016787,GO:0051301;gene=ycjY;Parent=GCA000010485_01386_gene;Note=SO:0001217,UniParc:UPI00016A1BD1,UniRef:UniRef100_A0A377K7J5,UniRef:UniRef50_P76049,UniRef:UniRef90_P76049
contig_1	Pyrodigal	gene	1400062	1400982	.	-	.	ID=GCA000010485_01387_gene;locus_tag=GCA000010485_01387;gene=mpaA
contig_1	Pyrodigal	CDS	1400062	1400982	.	-	0	ID=GCA000010485_01387;Name=murein tripeptide amidase MpaA;locus_tag=GCA000010485_01387;product=murein tripeptide amidase MpaA;Dbxref=GO:0004181,GO:0006508,GO:0008270;gene=mpaA;Parent=GCA000010485_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001385323.1,SO:0001217,UniParc:UPI00020DF8DB,UniRef:UniRef100_A0A066SRB6,UniRef:UniRef50_P76049,UniRef:UniRef90_A0A3Y3K4K7
contig_1	Pyrodigal	gene	1401120	1402019	.	+	.	ID=GCA000010485_01388_gene;locus_tag=GCA000010485_01388;gene=pgrR
contig_1	Pyrodigal	CDS	1401120	1402019	.	+	0	ID=GCA000010485_01388;Name=DNA-binding transcriptional regulator PgrR;locus_tag=GCA000010485_01388;product=DNA-binding transcriptional regulator PgrR;Dbxref=GO:0003677,GO:0003700,GO:0006351,GO:0043565,GO:0045892,GO:0071978;gene=pgrR;Parent=GCA000010485_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000817708,COG:COG0583,COG:K,KEGG:K24082,RefSeq:WP_000817700.1,SO:0001217,UniParc:UPI00000DEB4A,UniRef:UniRef100_E2QLT8,UniRef:UniRef50_P77333,UniRef:UniRef90_P77333
contig_1	Pyrodigal	gene	1402356	1403969	.	+	.	ID=GCA000010485_01389_gene;locus_tag=GCA000010485_01389;gene=mppA
contig_1	Pyrodigal	CDS	1402356	1403969	.	+	0	ID=GCA000010485_01389;Name=murein tripeptide ABC transporter substrate-binding protein MppA;locus_tag=GCA000010485_01389;product=murein tripeptide ABC transporter substrate-binding protein MppA;Dbxref=GO:0015031,GO:0015833,GO:0015834,GO:0016020,GO:0030288,GO:0035351,GO:0042597,GO:0042938,GO:0042939,GO:0055052,GO:0140207,GO:1900750,GO:1904680;gene=mppA;Parent=GCA000010485_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000683020,COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_000683029.1,SO:0001217,UniParc:UPI00018880F8,UniRef:UniRef100_A0A066T004,UniRef:UniRef50_P77348,UniRef:UniRef90_P77348
contig_1	Pyrodigal	gene	1404020	1405051	.	-	.	ID=GCA000010485_01390_gene;locus_tag=GCA000010485_01390;gene=ynaI
contig_1	Pyrodigal	CDS	1404020	1405051	.	-	0	ID=GCA000010485_01390;Name=low conductance mechanosensitive channel YnaI;locus_tag=GCA000010485_01390;product=low conductance mechanosensitive channel YnaI;Dbxref=GO:0005886,GO:0008381,GO:0042802,GO:0071470;gene=ynaI;Parent=GCA000010485_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000559900,COG:COG0668,COG:M,RefSeq:WP_000559888.1,SO:0001217,UniParc:UPI0001C229A2,UniRef:UniRef100_A0A066SZ82,UniRef:UniRef50_P0AEB5,UniRef:UniRef90_P0AEB5
contig_1	Pyrodigal	gene	1405295	1405552	.	+	.	ID=GCA000010485_01391_gene;locus_tag=GCA000010485_01391;gene=ynaJ
contig_1	Pyrodigal	CDS	1405295	1405552	.	+	0	ID=GCA000010485_01391;Name=putative protein YnaJ;locus_tag=GCA000010485_01391;product=putative protein YnaJ;Dbxref=GO:0005886;gene=ynaJ;Parent=GCA000010485_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000605090.1,SO:0001217,UniParc:UPI000013BADC,UniRef:UniRef100_P64445,UniRef:UniRef50_P64445,UniRef:UniRef90_P64445
contig_1	Pyrodigal	gene	1405602	1406552	.	-	.	ID=GCA000010485_01392_gene;locus_tag=GCA000010485_01392;gene=uspE
contig_1	Pyrodigal	CDS	1405602	1406552	.	-	0	ID=GCA000010485_01392;Name=universal stress protein UspE;locus_tag=GCA000010485_01392;product=universal stress protein UspE;Dbxref=GO:0005737;gene=uspE;Parent=GCA000010485_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_001262145.1,SO:0001217,UniParc:UPI0001888AA4,UniRef:UniRef100_A0A152XS11,UniRef:UniRef50_P0AAC0,UniRef:UniRef90_P0AAC0
contig_1	Pyrodigal	gene	1406704	1407456	.	-	.	ID=GCA000010485_01393_gene;locus_tag=GCA000010485_01393;gene=fnr
contig_1	Pyrodigal	CDS	1406704	1407456	.	-	0	ID=GCA000010485_01393;Name=fumarate/nitrate reduction transcriptional regulator Fnr;locus_tag=GCA000010485_01393;product=fumarate/nitrate reduction transcriptional regulator Fnr;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0046872,GO:0051539;gene=fnr;Parent=GCA000010485_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000611911,BlastRules:WP_003243241,BlastRules:WP_005662331,COG:COG0664,COG:T,RefSeq:WP_000611911.1,SO:0001217,UniParc:UPI000012AB27,UniRef:UniRef100_P0A9E5,UniRef:UniRef50_P0A9E5,UniRef:UniRef90_P0A9E5
contig_1	Pyrodigal	gene	1407651	1408166	.	-	.	ID=GCA000010485_01394_gene;locus_tag=GCA000010485_01394;gene=ogt
contig_1	Pyrodigal	CDS	1407651	1408166	.	-	0	ID=GCA000010485_01394;Name=methylated-DNA--[protein]-cysteine S-methyltransferase;locus_tag=GCA000010485_01394;product=methylated-DNA--[protein]-cysteine S-methyltransferase;Dbxref=GO:0003908,GO:0005737,GO:0006281,GO:0006307,GO:0032259;gene=ogt;Parent=GCA000010485_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000945011.1,SO:0001217,UniParc:UPI0000130C5C,UniRef:UniRef100_P0AFH0,UniRef:UniRef50_P0AFH0,UniRef:UniRef90_P0AFH0;ec_number=2.1.1.63
contig_1	Infernal	gene	1408543	1408638	.	-	.	ID=GCA000010485_01395_gene;locus_tag=GCA000010485_01395;gene=mcaS
contig_1	Infernal	ncRNA	1408543	1408638	3.6e-20	-	.	ID=GCA000010485_01395;Name=McaS/IsrA RNA;locus_tag=GCA000010485_01395;gene=mcaS;product=McaS/IsrA RNA;Dbxref=RFAM:RF00115;Parent=GCA000010485_01395_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00115
contig_1	Pyrodigal	gene	1408709	1409524	.	-	.	ID=GCA000010485_01396_gene;locus_tag=GCA000010485_01396
contig_1	Pyrodigal	CDS	1408709	1409524	.	-	0	ID=GCA000010485_01396;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000010485_01396;product=HTH araC/xylS-type domain-containing protein;Parent=GCA000010485_01396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000156573.1,SO:0001217,UniParc:UPI0000D508F3,UniRef:UniRef100_A0A1V2SWG7,UniRef:UniRef50_A0A2X3DXA2,UniRef:UniRef90_A0A0H2V761
contig_1	Pyrodigal	gene	1409621	1410649	.	+	.	ID=GCA000010485_01397_gene;locus_tag=GCA000010485_01397
contig_1	Pyrodigal	CDS	1409621	1410649	.	+	0	ID=GCA000010485_01397;Name=Secretion protein;locus_tag=GCA000010485_01397;product=Secretion protein;Parent=GCA000010485_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03543,RefSeq:WP_000587198.1,SO:0001217,UniParc:UPI0001C229A4,UniRef:UniRef100_A0A061Y9T9,UniRef:UniRef50_A0A9X4GQ19,UniRef:UniRef90_A0A376W4V5
contig_1	Pyrodigal	gene	1410649	1412160	.	+	.	ID=GCA000010485_01398_gene;locus_tag=GCA000010485_01398
contig_1	Pyrodigal	CDS	1410649	1412160	.	+	0	ID=GCA000010485_01398;Name=Multidrug resistant protein;locus_tag=GCA000010485_01398;product=Multidrug resistant protein;Parent=GCA000010485_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03446,SO:0001217,UniParc:UPI00021858FF,UniRef:UniRef100_A0AAC9M5U2,UniRef:UniRef50_A0A380APL6,UniRef:UniRef90_A0A380APL6
contig_1	Pyrodigal	gene	1412355	1412918	.	+	.	ID=GCA000010485_01399_gene;locus_tag=GCA000010485_01399;gene=smrA
contig_1	Pyrodigal	CDS	1412355	1412918	.	+	0	ID=GCA000010485_01399;Name=DNA endonuclease SmrA;locus_tag=GCA000010485_01399;product=DNA endonuclease SmrA;Dbxref=GO:0003677,GO:0004520;gene=smrA;Parent=GCA000010485_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2840,COG:JL,RefSeq:WP_001046838.1,SO:0001217,UniParc:UPI0001C229A6,UniRef:UniRef100_A0A061JZF8,UniRef:UniRef50_P76053,UniRef:UniRef90_P76053;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1412939	1414171	.	-	.	ID=GCA000010485_01400_gene;locus_tag=GCA000010485_01400;gene=dgcM
contig_1	Pyrodigal	CDS	1412939	1414171	.	-	0	ID=GCA000010485_01400;Name=diguanylate cyclase DgcM;locus_tag=GCA000010485_01400;product=diguanylate cyclase DgcM;Dbxref=GO:0005525,GO:0005886,GO:0042802,GO:0043709,GO:0046872,GO:0052621,GO:1900233,GO:1902201;gene=dgcM;Parent=GCA000010485_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000628058,RefSeq:WP_001296045.1,SO:0001217,UniParc:UPI0002A2A559,UniRef:UniRef100_A0A061YC69,UniRef:UniRef50_P77302,UniRef:UniRef90_P77302;ec_number=2.7.7.65
contig_1	Bakta	gene	1414365	1414412	.	+	.	ID=GCA000010485_01401_gene;locus_tag=GCA000010485_01401;inference=ab initio prediction:Bakta;gene=ynaN
contig_1	Bakta	CDS	1414365	1414412	.	+	0	ID=GCA000010485_01401;Name=Protein YnaN;locus_tag=GCA000010485_01401;product=Protein YnaN;gene=ynaN;Parent=GCA000010485_01401_gene;Note=RefSeq:WP_211180494.1,SO:0001217,UniParc:UPI00107E63D9,UniRef:UniRef100_P0DSF1,UniRef:UniRef50_P0DSF1,UniRef:UniRef90_P0DSF1
contig_1	Pyrodigal	gene	1414426	1415409	.	+	.	ID=GCA000010485_01402_gene;locus_tag=GCA000010485_01402;gene=zntB
contig_1	Pyrodigal	CDS	1414426	1415409	.	+	0	ID=GCA000010485_01402;Name=zinc transporter ZntB;locus_tag=GCA000010485_01402;product=zinc transporter ZntB;Dbxref=GO:0000287,GO:0005385,GO:0005886,GO:0015087,GO:0015095,GO:0050897,GO:0071577;gene=zntB;Parent=GCA000010485_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,KEGG:K16074,RefSeq:WP_000387388.1,SO:0001217,UniParc:UPI000013A8F3,UniRef:UniRef100_P64423,UniRef:UniRef50_P64423,UniRef:UniRef90_P64423
contig_1	Infernal	gene	1415505	1415622	.	+	.	ID=GCA000010485_01403_gene;locus_tag=GCA000010485_01403;gene=frnS
contig_1	Infernal	ncRNA	1415505	1415622	1.6e-23	+	.	ID=GCA000010485_01403;Name=Fumarate/nitrate reductase regulator sRNA;locus_tag=GCA000010485_01403;gene=frnS;product=Fumarate/nitrate reductase regulator sRNA;Dbxref=RFAM:RF01796;Parent=GCA000010485_01403_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01796
contig_1	Pyrodigal	gene	1415684	1415857	.	+	.	ID=GCA000010485_01404_gene;locus_tag=GCA000010485_01404;gene=ynaL
contig_1	Pyrodigal	CDS	1415684	1415857	.	+	0	ID=GCA000010485_01404;Name=Protein YnaL;locus_tag=GCA000010485_01404;product=Protein YnaL;gene=ynaL;Parent=GCA000010485_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296046.1,SO:0001217,UniParc:UPI0000DACE2C,UniRef:UniRef100_P0DPO3,UniRef:UniRef50_P0DPO3,UniRef:UniRef90_P0DPO3
contig_1	Pyrodigal	gene	1415887	1417260	.	+	.	ID=GCA000010485_01405_gene;locus_tag=GCA000010485_01405;gene=dbpA
contig_1	Pyrodigal	CDS	1415887	1417260	.	+	0	ID=GCA000010485_01405;Name=ATP-dependent RNA helicase DbpA;locus_tag=GCA000010485_01405;product=ATP-dependent RNA helicase DbpA;Dbxref=GO:0000027,GO:0003676,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0016887,GO:0019843,GO:0033677,GO:0034458,GO:0043531,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=dbpA;Parent=GCA000010485_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000123790.1,SO:0001217,UniParc:UPI0001C229A8,UniRef:UniRef100_A0A7I0KQQ0,UniRef:UniRef50_P21693,UniRef:UniRef90_P21693;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1417388	1418323	.	-	.	ID=GCA000010485_01406_gene;locus_tag=GCA000010485_01406;gene=ttcA
contig_1	Pyrodigal	CDS	1417388	1418323	.	-	0	ID=GCA000010485_01406;Name=tRNA 2-thiocytidine(32) synthetase TtcA;locus_tag=GCA000010485_01406;product=tRNA 2-thiocytidine(32) synthetase TtcA;Dbxref=GO:0000049,GO:0000287,GO:0005524,GO:0005737,GO:0008033,GO:0016783,GO:0034227,GO:0051539;gene=ttcA;Parent=GCA000010485_01406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K14058,RefSeq:WP_001157412.1,SO:0001217,UniParc:UPI0000061471,UniRef:UniRef100_Q8FHP6,UniRef:UniRef50_P76055,UniRef:UniRef90_P76055;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	1420192	1420461	.	-	.	ID=GCA000010485_01407_gene;locus_tag=GCA000010485_01407
contig_1	Pyrodigal	CDS	1420192	1420461	.	-	0	ID=GCA000010485_01407;Name=Metal ABC transporter permease;locus_tag=GCA000010485_01407;product=Metal ABC transporter permease;Parent=GCA000010485_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531674.1,SO:0001217,UniParc:UPI0002A1B66F,UniRef:UniRef100_A0A061YAV2,UniRef:UniRef50_Q8GC61,UniRef:UniRef90_Q8GC61
contig_1	Pyrodigal	gene	1420649	1421083	.	-	.	ID=GCA000010485_01408_gene;locus_tag=GCA000010485_01408;gene=uspF
contig_1	Pyrodigal	CDS	1420649	1421083	.	-	0	ID=GCA000010485_01408;Name=universal stress protein UspF;locus_tag=GCA000010485_01408;product=universal stress protein UspF;Dbxref=GO:0005524,GO:0007155,GO:1902021;gene=uspF;Parent=GCA000010485_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_001295593.1,SO:0001217,UniParc:UPI000000E2B1,UniRef:UniRef100_P0A4P7,UniRef:UniRef50_P37903,UniRef:UniRef90_P37903
contig_1	Pyrodigal	gene	1421224	1422357	.	-	.	ID=GCA000010485_01409_gene;locus_tag=GCA000010485_01409;gene=ompN
contig_1	Pyrodigal	CDS	1421224	1422357	.	-	0	ID=GCA000010485_01409;Name=porin OmpN;locus_tag=GCA000010485_01409;product=porin OmpN;Dbxref=GO:0009279,GO:0015288,GO:0016020,GO:0034219,GO:0034220,GO:0046930;gene=ompN;Parent=GCA000010485_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_063070036,RefSeq:WP_000837933.1,SO:0001217,UniParc:UPI00000E49EE,UniRef:UniRef100_A0A061LQ75,UniRef:UniRef50_P02931,UniRef:UniRef90_P77747
contig_1	Infernal	gene	1422582	1422702	.	+	.	ID=GCA000010485_01410_gene;locus_tag=GCA000010485_01410;gene=micC
contig_1	Infernal	ncRNA	1422582	1422702	2e-20	+	.	ID=GCA000010485_01410;Name=MicC RNA;locus_tag=GCA000010485_01410;gene=micC;product=MicC RNA;Dbxref=RFAM:RF00121;Parent=GCA000010485_01410_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00121
contig_1	Pyrodigal	gene	1422723	1426247	.	-	.	ID=GCA000010485_01411_gene;locus_tag=GCA000010485_01411;gene=nifJ
contig_1	Pyrodigal	CDS	1422723	1426247	.	-	0	ID=GCA000010485_01411;Name=pyruvate:ferredoxin (flavodoxin) oxidoreductase;locus_tag=GCA000010485_01411;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;Dbxref=GO:0005506,GO:0006979,GO:0016903,GO:0022900,GO:0030976,GO:0043873,GO:0051539;gene=nifJ;Parent=GCA000010485_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1143,KEGG:K03737,RefSeq:WP_000628229.1,SO:0001217,UniParc:UPI0001C229AA,UniRef:UniRef100_A0A066SZY8,UniRef:UniRef50_P52647,UniRef:UniRef90_P52647;ec_number=1.2.7.-
contig_1	Pyrodigal	gene	1426521	1426787	.	+	.	ID=GCA000010485_01412_gene;locus_tag=GCA000010485_01412
contig_1	Pyrodigal	CDS	1426521	1426787	.	+	0	ID=GCA000010485_01412;Name=DUF333 domain-containing protein;locus_tag=GCA000010485_01412;product=DUF333 domain-containing protein;Parent=GCA000010485_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001200675.1,SO:0001217,UniParc:UPI0001C229AB,UniRef:UniRef100_A0A066SV72,UniRef:UniRef50_P0ACW2,UniRef:UniRef90_A0A066SV72
contig_1	Pyrodigal	gene	1426784	1427206	.	-	.	ID=GCA000010485_01413_gene;locus_tag=GCA000010485_01413;gene=hslJ
contig_1	Pyrodigal	CDS	1426784	1427206	.	-	0	ID=GCA000010485_01413;Name=heat shock protein HslJ;locus_tag=GCA000010485_01413;product=heat shock protein HslJ;Dbxref=GO:0009408;gene=hslJ;Parent=GCA000010485_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296048.1,SO:0001217,UniParc:UPI00005EF5F3,UniRef:UniRef100_E2QLV9,UniRef:UniRef50_P52644,UniRef:UniRef90_P52644
contig_1	Pyrodigal	gene	1427317	1428306	.	-	.	ID=GCA000010485_01414_gene;locus_tag=GCA000010485_01414;gene=ldhA
contig_1	Pyrodigal	CDS	1427317	1428306	.	-	0	ID=GCA000010485_01414;Name=D-lactate dehydrogenase;locus_tag=GCA000010485_01414;product=D-lactate dehydrogenase;Dbxref=GO:0005829,GO:0008720,GO:0009408,GO:0019664,GO:0042802,GO:0051289,GO:0070404;gene=ldhA;Parent=GCA000010485_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000762236,COG:CHR,COG:COG1052,RefSeq:WP_000762229.1,SO:0001217,UniParc:UPI00000D07C0,UniRef:UniRef100_C3TB72,UniRef:UniRef50_P52643,UniRef:UniRef90_P52643;ec_number=1.1.1.28
contig_1	Pyrodigal	gene	1428514	1431153	.	+	.	ID=GCA000010485_01415_gene;locus_tag=GCA000010485_01415;gene=ydbH
contig_1	Pyrodigal	CDS	1428514	1431153	.	+	0	ID=GCA000010485_01415;Name=YdbH family protein;locus_tag=GCA000010485_01415;product=YdbH family protein;Dbxref=GO:0005886;gene=ydbH;Parent=GCA000010485_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000900946.1,SO:0001217,UniParc:UPI0001C229AC,UniRef:UniRef100_A0A066SZY3,UniRef:UniRef50_P52645,UniRef:UniRef90_P52645
contig_1	Pyrodigal	gene	1431150	1431335	.	+	.	ID=GCA000010485_01416_gene;locus_tag=GCA000010485_01416;gene=ydbH
contig_1	Pyrodigal	CDS	1431150	1431335	.	+	0	ID=GCA000010485_01416;Name=YdbH family protein;locus_tag=GCA000010485_01416;product=YdbH family protein;Dbxref=GO:0005886;gene=ydbH;Parent=GCA000010485_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000698145.1,SO:0001217,UniParc:UPI000013BAEA,UniRef:UniRef100_P64448,UniRef:UniRef50_P52645,UniRef:UniRef90_P52645
contig_1	Pyrodigal	gene	1431343	1431669	.	+	.	ID=GCA000010485_01417_gene;locus_tag=GCA000010485_01417;gene=ydbL
contig_1	Pyrodigal	CDS	1431343	1431669	.	+	0	ID=GCA000010485_01417;Name=putative protein YdbL;locus_tag=GCA000010485_01417;product=putative protein YdbL;gene=ydbL;Parent=GCA000010485_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09978,RefSeq:WP_001296049.1,SO:0001217,UniParc:UPI000187BCFF,UniRef:UniRef100_A0A061Y9E6,UniRef:UniRef50_P76076,UniRef:UniRef90_P76076
contig_1	Pyrodigal	gene	1431841	1432074	.	-	.	ID=GCA000010485_01418_gene;locus_tag=GCA000010485_01418;gene=feaR
contig_1	Pyrodigal	CDS	1431841	1432074	.	-	0	ID=GCA000010485_01418;Name=transcriptional regulator FeaR;locus_tag=GCA000010485_01418;product=transcriptional regulator FeaR;Dbxref=GO:0000987,GO:0003700,GO:0006355,GO:0043565,GO:0045893;gene=feaR;Parent=GCA000010485_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14063,RefSeq:WP_001296050.1,SO:0001217,UniParc:UPI000209C6B2,UniRef:UniRef100_A0A2X2ZIM5,UniRef:UniRef50_Q47129,UniRef:UniRef90_Q47129
contig_1	Pyrodigal	gene	1432148	1432318	.	+	.	ID=GCA000010485_01419_gene;locus_tag=GCA000010485_01419;gene=paaY
contig_1	Pyrodigal	CDS	1432148	1432318	.	+	0	ID=GCA000010485_01419;Name=Phenylacetic acid degradation protein PaaY;locus_tag=GCA000010485_01419;product=Phenylacetic acid degradation protein PaaY;gene=paaY;Parent=GCA000010485_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8S0FV48,UniRef:UniRef90_A0A8S0FV48
contig_1	Pyrodigal	gene	1432747	1442232	.	+	.	ID=GCA000010485_01420_gene;locus_tag=GCA000010485_01420
contig_1	Pyrodigal	CDS	1432747	1442232	.	+	0	ID=GCA000010485_01420;Name=hypothetical protein;locus_tag=GCA000010485_01420;product=hypothetical protein;Parent=GCA000010485_01420_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1442452	1443318	.	+	.	ID=GCA000010485_01421_gene;locus_tag=GCA000010485_01421;gene=pdxI
contig_1	Pyrodigal	CDS	1442452	1443318	.	+	0	ID=GCA000010485_01421;Name=pyridoxine 4-dehydrogenase;locus_tag=GCA000010485_01421;product=pyridoxine 4-dehydrogenase;Dbxref=GO:0004033,GO:0005737,GO:0005829,GO:0009443,GO:0050236;gene=pdxI;Parent=GCA000010485_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000097801,RefSeq:WP_000097823.1,SO:0001217,UniParc:UPI0001C22A68,UniRef:UniRef100_A0A066SZ56,UniRef:UniRef50_P25906,UniRef:UniRef90_P25906;ec_number=1.1.1.65
contig_1	Pyrodigal	gene	1443358	1443963	.	-	.	ID=GCA000010485_01422_gene;locus_tag=GCA000010485_01422;gene=azoR
contig_1	Pyrodigal	CDS	1443358	1443963	.	-	0	ID=GCA000010485_01422;Name=FMN-dependent NADH-azoreductase;locus_tag=GCA000010485_01422;product=FMN-dependent NADH-azoreductase;Dbxref=GO:0009055,GO:0010181,GO:0016652,GO:0016655;gene=azoR;Parent=GCA000010485_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000048924,COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_000048964.1,SO:0001217,UniParc:UPI0001C22A69,UniRef:UniRef100_A0A066SV66,UniRef:UniRef50_P41407,UniRef:UniRef90_P41407;ec_number=1.7.1.17
contig_1	Pyrodigal	gene	1444164	1448066	.	+	.	ID=GCA000010485_01423_gene;locus_tag=GCA000010485_01423;gene=hrpA
contig_1	Pyrodigal	CDS	1444164	1448066	.	+	0	ID=GCA000010485_01423;Name=ATP-dependent RNA helicase HrpA;locus_tag=GCA000010485_01423;product=ATP-dependent RNA helicase HrpA;Dbxref=GO:0003676,GO:0003689,GO:0003723,GO:0003724,GO:0004386,GO:0005524,GO:0009451,GO:0016887,GO:0034458,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=hrpA;Parent=GCA000010485_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1643,COG:J,RefSeq:WP_000139528.1,SO:0001217,UniParc:UPI0002185942,UniRef:UniRef100_A0A066SR95,UniRef:UniRef50_P43329,UniRef:UniRef90_P43329;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1448339	1449139	.	+	.	ID=GCA000010485_01424_gene;locus_tag=GCA000010485_01424;gene=ydcF
contig_1	Pyrodigal	CDS	1448339	1449139	.	+	0	ID=GCA000010485_01424;Name=Protein YdcF;locus_tag=GCA000010485_01424;product=Protein YdcF;Dbxref=GO:0005886;gene=ydcF;Parent=GCA000010485_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001027935.1,SO:0001217,UniParc:UPI0001C22A6B,UniRef:UniRef100_A0A066SRJ5,UniRef:UniRef50_P34209,UniRef:UniRef90_P34209
contig_1	Pyrodigal	gene	1449349	1450788	.	+	.	ID=GCA000010485_01425_gene;locus_tag=GCA000010485_01425;gene=aldA
contig_1	Pyrodigal	CDS	1449349	1450788	.	+	0	ID=GCA000010485_01425;Name=aldehyde dehydrogenase;locus_tag=GCA000010485_01425;product=aldehyde dehydrogenase;Dbxref=GO:0004777,GO:0005829,GO:0008911,GO:0009450,GO:0016620,GO:0019301,GO:0032991,GO:0042355,GO:0042802,GO:0050569;gene=aldA;Parent=GCA000010485_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000115931.1,SO:0001217,UniParc:UPI0001C22A6C,UniRef:UniRef100_A0A066SZX6,UniRef:UniRef50_P25553,UniRef:UniRef90_P25553;ec_number=1.2.1.22
contig_1	Pyrodigal	gene	1450830	1451831	.	-	.	ID=GCA000010485_01426_gene;locus_tag=GCA000010485_01426;gene=gap
contig_1	Pyrodigal	CDS	1450830	1451831	.	-	0	ID=GCA000010485_01426;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000010485_01426;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000010485_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000048688.1,SO:0001217,UniParc:UPI00000DEB65,UniRef:UniRef100_A0A0J8XNS2,UniRef:UniRef50_P58072,UniRef:UniRef90_P58072;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1452020	1452550	.	+	.	ID=GCA000010485_01427_gene;locus_tag=GCA000010485_01427;gene=cybB
contig_1	Pyrodigal	CDS	1452020	1452550	.	+	0	ID=GCA000010485_01427;Name=cytochrome b561;locus_tag=GCA000010485_01427;product=cytochrome b561;Dbxref=GO:0005886,GO:0009055,GO:0016020,GO:0016491,GO:0020037,GO:0022904,GO:0046872;gene=cybB;Parent=GCA000010485_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3038,RefSeq:WP_001531678.1,SO:0001217,UniParc:UPI0002A276FB,UniRef:UniRef100_A0A061KCX4,UniRef:UniRef50_P0ABE5,UniRef:UniRef90_P0ABE5;ec_number=1.10.3.17
contig_1	Infernal	gene	1452561	1452624	.	-	.	ID=GCA000010485_01428_gene;locus_tag=GCA000010485_01428;gene=rydC
contig_1	Infernal	ncRNA	1452561	1452624	2.2e-17	-	.	ID=GCA000010485_01428;Name=RydC RNA;locus_tag=GCA000010485_01428;gene=rydC;product=RydC RNA;Dbxref=RFAM:RF00505;Parent=GCA000010485_01428_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00505
contig_1	Pyrodigal	gene	1452795	1452968	.	+	.	ID=GCA000010485_01429_gene;locus_tag=GCA000010485_01429;gene=ydcA
contig_1	Pyrodigal	CDS	1452795	1452968	.	+	0	ID=GCA000010485_01429;Name=putative protein YdcA;locus_tag=GCA000010485_01429;product=putative protein YdcA;gene=ydcA;Parent=GCA000010485_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000731859.1,SO:0001217,UniParc:UPI00000E49F0,UniRef:UniRef100_E2QLX6,UniRef:UniRef50_P0ACW4,UniRef:UniRef90_P0ACW4
contig_1	Bakta	gene	1452994	1453062	.	+	.	ID=GCA000010485_01430_gene;locus_tag=GCA000010485_01430;inference=ab initio prediction:Bakta;gene=yncP
contig_1	Bakta	CDS	1452994	1453062	.	+	0	ID=GCA000010485_01430;Name=Protein YncP;locus_tag=GCA000010485_01430;product=Protein YncP;gene=yncP;Parent=GCA000010485_01430_gene;Note=RefSeq:WP_212734105.1,SO:0001217,UniParc:UPI001BB085AA,UniRef:UniRef100_A0AAF0NNY5,UniRef:UniRef50_P0DSF2,UniRef:UniRef90_A0AAF0NNY5
contig_1	Pyrodigal	gene	1453080	1453247	.	-	.	ID=GCA000010485_01431_gene;locus_tag=GCA000010485_01431;gene=mokB
contig_1	Pyrodigal	CDS	1453080	1453247	.	-	0	ID=GCA000010485_01431;Name=IS3 family transposase;locus_tag=GCA000010485_01431;product=IS3 family transposase;Dbxref=GO:0004803;gene=mokB;Parent=GCA000010485_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001307189.1,SO:0001217,UniParc:UPI00000D30F3,UniRef:UniRef100_P76096,UniRef:UniRef50_P76096,UniRef:UniRef90_P76096
contig_1	Infernal	gene	1453184	1453335	.	-	.	ID=GCA000010485_01432_gene;locus_tag=GCA000010485_01432;gene=sok
contig_1	Infernal	ncRNA	1453184	1453335	9.3e-18	-	.	ID=GCA000010485_01432;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_01432;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_01432_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	1453602	1453895	.	+	.	ID=GCA000010485_01433_gene;locus_tag=GCA000010485_01433;gene=cybB
contig_1	Pyrodigal	CDS	1453602	1453895	.	+	0	ID=GCA000010485_01433;Name=cytochrome b561;locus_tag=GCA000010485_01433;product=cytochrome b561;Dbxref=GO:0004888,GO:0005886,GO:0006935,GO:0007165,GO:0009055,GO:0016020,GO:0022904,GO:0042803,GO:0098561;gene=cybB;Parent=GCA000010485_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05876,SO:0001217,UniParc:UPI0002185944,UniRef:UniRef100_A0AA36KXA8,UniRef:UniRef50_P05704,UniRef:UniRef90_P05704
contig_1	Pyrodigal	gene	1453933	1454856	.	-	.	ID=GCA000010485_01434_gene;locus_tag=GCA000010485_01434;gene=ydcI
contig_1	Pyrodigal	CDS	1453933	1454856	.	-	0	ID=GCA000010485_01434;Name=putative HTH-type transcriptional regulator YdcI;locus_tag=GCA000010485_01434;product=putative HTH-type transcriptional regulator YdcI;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0043565,GO:0045892;gene=ydcI;Parent=GCA000010485_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000414563.1,SO:0001217,UniParc:UPI00005EF603,UniRef:UniRef100_E2QLX8,UniRef:UniRef50_P77171,UniRef:UniRef90_P77171
contig_1	Pyrodigal	gene	1455073	1456416	.	+	.	ID=GCA000010485_01435_gene;locus_tag=GCA000010485_01435;gene=ydcJ
contig_1	Pyrodigal	CDS	1455073	1456416	.	+	0	ID=GCA000010485_01435;Name=2-oxoadipate dioxygenase/decarboxylase;locus_tag=GCA000010485_01435;product=2-oxoadipate dioxygenase/decarboxylase;Dbxref=GO:0046872,GO:0051213;gene=ydcJ;Parent=GCA000010485_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5383,COG:R,KEGG:K25986,RefSeq:WP_000013747.1,SO:0001217,UniParc:UPI0001C22A6F,UniRef:UniRef100_A0A3L0YS42,UniRef:UniRef50_P76097,UniRef:UniRef90_P76097;ec_number=1.13.11.93
contig_1	Pyrodigal	gene	1456677	1458296	.	+	.	ID=GCA000010485_01436_gene;locus_tag=GCA000010485_01436;gene=opgD
contig_1	Pyrodigal	CDS	1456677	1458296	.	+	0	ID=GCA000010485_01436;Name=glucan biosynthesis protein OpgD;locus_tag=GCA000010485_01436;product=glucan biosynthesis protein OpgD;Dbxref=GO:0003824,GO:0030246,GO:0030288,GO:0051274;gene=opgD;Parent=GCA000010485_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000375961,COG:COG3131,COG:M,KEGG:K03670,RefSeq:WP_001296055.1,SO:0001217,UniParc:UPI0000DACE36,UniRef:UniRef100_A1AB32,UniRef:UniRef50_P40120,UniRef:UniRef90_P40120
contig_1	Pyrodigal	gene	1458436	1458660	.	+	.	ID=GCA000010485_01437_gene;locus_tag=GCA000010485_01437;gene=ydcH
contig_1	Pyrodigal	CDS	1458436	1458660	.	+	0	ID=GCA000010485_01437;Name=putative protein YdcH;locus_tag=GCA000010485_01437;product=putative protein YdcH;gene=ydcH;Parent=GCA000010485_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296056.1,SO:0001217,UniParc:UPI0000DACE37,UniRef:UniRef100_E2QLY1,UniRef:UniRef50_P0ACW6,UniRef:UniRef90_P0ACW6
contig_1	Pyrodigal	gene	1458723	1459262	.	+	.	ID=GCA000010485_01438_gene;locus_tag=GCA000010485_01438;gene=rimL
contig_1	Pyrodigal	CDS	1458723	1459262	.	+	0	ID=GCA000010485_01438;Name=50S ribosomal protein L7/L12-serine acetyltransferase;locus_tag=GCA000010485_01438;product=50S ribosomal protein L7/L12-serine acetyltransferase;Dbxref=GO:0004596,GO:0005737,GO:0008080,GO:0008999,GO:0036211,GO:1990189;gene=rimL;Parent=GCA000010485_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545971.1,SO:0001217,UniParc:UPI0001C22A70,UniRef:UniRef100_A0A3L1JQ03,UniRef:UniRef50_P13857,UniRef:UniRef90_P13857;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1459254	1460234	.	-	.	ID=GCA000010485_01439_gene;locus_tag=GCA000010485_01439;gene=ydcK
contig_1	Pyrodigal	CDS	1459254	1460234	.	-	0	ID=GCA000010485_01439;Name=YdcK family protein;locus_tag=GCA000010485_01439;product=YdcK family protein;Dbxref=GO:0016746,GO:0016779;gene=ydcK;Parent=GCA000010485_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001234088.1,SO:0001217,UniParc:UPI0001C22A71,UniRef:UniRef100_A0A066SZW6,UniRef:UniRef50_P76100,UniRef:UniRef90_P76100;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1460358	1461350	.	+	.	ID=GCA000010485_01440_gene;locus_tag=GCA000010485_01440;gene=tehA
contig_1	Pyrodigal	CDS	1460358	1461350	.	+	0	ID=GCA000010485_01440;Name=dicarboxylate transporter/tellurite-resistance protein TehA;locus_tag=GCA000010485_01440;product=dicarboxylate transporter/tellurite-resistance protein TehA;Dbxref=GO:0005886,GO:0006812,GO:0016020,GO:0042802,GO:0046583,GO:0046677,GO:0046690,GO:0055085;gene=tehA;Parent=GCA000010485_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1275,COG:V,RefSeq:WP_001298119.1,SO:0001217,UniParc:UPI00005EF609,UniRef:UniRef100_A0A0G9FP59,UniRef:UniRef50_P25396,UniRef:UniRef90_P25396
contig_1	Pyrodigal	gene	1461347	1461940	.	+	.	ID=GCA000010485_01441_gene;locus_tag=GCA000010485_01441;gene=tehB
contig_1	Pyrodigal	CDS	1461347	1461940	.	+	0	ID=GCA000010485_01441;Name=tellurite resistance methyltransferase TehB;locus_tag=GCA000010485_01441;product=tellurite resistance methyltransferase TehB;Dbxref=GO:0008757,GO:0046690;gene=tehB;Parent=GCA000010485_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000586718.1,SO:0001217,UniParc:UPI0001C22A72,UniRef:UniRef100_A0A066SV54,UniRef:UniRef50_A0A370V5S7,UniRef:UniRef90_A0A370V5S7;ec_number=2.1.1.265
contig_1	Pyrodigal	gene	1462243	1462911	.	+	.	ID=GCA000010485_01442_gene;locus_tag=GCA000010485_01442;gene=ydcL
contig_1	Pyrodigal	CDS	1462243	1462911	.	+	0	ID=GCA000010485_01442;Name=putative lipoprotein YdcL;locus_tag=GCA000010485_01442;product=putative lipoprotein YdcL;Dbxref=GO:0005886;gene=ydcL;Parent=GCA000010485_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001261013.1,SO:0001217,UniParc:UPI000013A924,UniRef:UniRef100_P64451,UniRef:UniRef50_P64451,UniRef:UniRef90_P64451
contig_1	Pyrodigal	gene	1462946	1464118	.	-	.	ID=GCA000010485_01443_gene;locus_tag=GCA000010485_01443;gene=ydcO
contig_1	Pyrodigal	CDS	1462946	1464118	.	-	0	ID=GCA000010485_01443;Name=BenE family transporter YdcO;locus_tag=GCA000010485_01443;product=BenE family transporter YdcO;Dbxref=GO:0005886,GO:0042925;gene=ydcO;Parent=GCA000010485_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001236265,KEGG:K05782,RefSeq:WP_001236238.1,SO:0001217,UniParc:UPI0002185948,UniRef:UniRef100_A0A1U9TNJ0,UniRef:UniRef50_P76103,UniRef:UniRef90_P76103
contig_1	Pyrodigal	gene	1464210	1464746	.	+	.	ID=GCA000010485_01444_gene;locus_tag=GCA000010485_01444;gene=sutR
contig_1	Pyrodigal	CDS	1464210	1464746	.	+	0	ID=GCA000010485_01444;Name=DNA-binding transcriptional regulator SutR;locus_tag=GCA000010485_01444;product=DNA-binding transcriptional regulator SutR;gene=sutR;Parent=GCA000010485_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000429155,RefSeq:WP_000429158.1,SO:0001217,UniParc:UPI0001C22A74,UniRef:UniRef100_A0A061YEJ2,UniRef:UniRef50_P77626,UniRef:UniRef90_B7MMR8
contig_1	Pyrodigal	gene	1464777	1466780	.	+	.	ID=GCA000010485_01445_gene;locus_tag=GCA000010485_01445;gene=rlhA
contig_1	Pyrodigal	CDS	1464777	1466780	.	+	0	ID=GCA000010485_01445;Name=23S rRNA 5-hydroxycytidine C2501 synthase;locus_tag=GCA000010485_01445;product=23S rRNA 5-hydroxycytidine C2501 synthase;gene=rlhA;Parent=GCA000010485_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001303492,KEGG:K24847,SO:0001217,UniParc:UPI0002185971,UniRef:UniRef100_A0A8S0FU39,UniRef:UniRef50_P76104,UniRef:UniRef90_A0A376MWV8
contig_1	Pyrodigal	gene	1466872	1467042	.	-	.	ID=GCA000010485_01446_gene;locus_tag=GCA000010485_01446;gene=yncJ
contig_1	Pyrodigal	CDS	1466872	1467042	.	-	0	ID=GCA000010485_01446;Name=putative protein YncJ;locus_tag=GCA000010485_01446;product=putative protein YncJ;gene=yncJ;Parent=GCA000010485_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000170F0A5,UniRef:UniRef100_Q6KCW2,UniRef:UniRef50_P64459,UniRef:UniRef90_P64459
contig_1	Pyrodigal	gene	1467596	1469002	.	+	.	ID=GCA000010485_01447_gene;locus_tag=GCA000010485_01447;gene=ydcR
contig_1	Pyrodigal	CDS	1467596	1469002	.	+	0	ID=GCA000010485_01447;Name=putative HTH-type transcriptional regulator YdcR;locus_tag=GCA000010485_01447;product=putative HTH-type transcriptional regulator YdcR;Dbxref=GO:0003677,GO:0003700,GO:0008483,GO:0009058,GO:0030170,GO:1901605;gene=ydcR;Parent=GCA000010485_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1167,COG:KE,RefSeq:WP_000760639.1,SO:0001217,UniParc:UPI0001C22A77,UniRef:UniRef100_A0A066SZ37,UniRef:UniRef50_P77730,UniRef:UniRef90_P77730
contig_1	Pyrodigal	gene	1469247	1470392	.	+	.	ID=GCA000010485_01448_gene;locus_tag=GCA000010485_01448;gene=ydcS
contig_1	Pyrodigal	CDS	1469247	1470392	.	+	0	ID=GCA000010485_01448;Name=putative ABC transporter substrate-binding protein YdcS;locus_tag=GCA000010485_01448;product=putative ABC transporter substrate-binding protein YdcS;gene=ydcS;Parent=GCA000010485_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000047436.1,SO:0001217,UniParc:UPI0001C22A78,UniRef:UniRef100_A0A061Y6G2,UniRef:UniRef50_P76108,UniRef:UniRef90_A0A135PUV8
contig_1	Pyrodigal	gene	1470410	1471423	.	+	.	ID=GCA000010485_01449_gene;locus_tag=GCA000010485_01449;gene=ydcT
contig_1	Pyrodigal	CDS	1470410	1471423	.	+	0	ID=GCA000010485_01449;Name=putative ABC transporter ATP-binding protein YdcT;locus_tag=GCA000010485_01449;product=putative ABC transporter ATP-binding protein YdcT;Dbxref=GO:0005524,GO:0016020,GO:0016887,GO:0022857,GO:0055052,GO:0055085;gene=ydcT;Parent=GCA000010485_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000220422.1,SO:0001217,UniParc:UPI0001C22A79,UniRef:UniRef100_A0A061YEI5,UniRef:UniRef50_P77795,UniRef:UniRef90_P77795
contig_1	Pyrodigal	gene	1471424	1472365	.	+	.	ID=GCA000010485_01450_gene;locus_tag=GCA000010485_01450;gene=ydcU
contig_1	Pyrodigal	CDS	1471424	1472365	.	+	0	ID=GCA000010485_01450;Name=Inner membrane ABC transporter permease protein YdcU;locus_tag=GCA000010485_01450;product=Inner membrane ABC transporter permease protein YdcU;Dbxref=GO:0005886,GO:0016020,GO:0055052,GO:0055085;gene=ydcU;Parent=GCA000010485_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251325.1,SO:0001217,UniParc:UPI00000DEB76,UniRef:UniRef100_A0A061K1Z7,UniRef:UniRef50_P77156,UniRef:UniRef90_P77156
contig_1	Pyrodigal	gene	1472355	1473149	.	+	.	ID=GCA000010485_01451_gene;locus_tag=GCA000010485_01451;gene=ydcV
contig_1	Pyrodigal	CDS	1472355	1473149	.	+	0	ID=GCA000010485_01451;Name=Inner membrane ABC transporter permease protein YdcV;locus_tag=GCA000010485_01451;product=Inner membrane ABC transporter permease protein YdcV;Dbxref=GO:0005886,GO:0055085;gene=ydcV;Parent=GCA000010485_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000555458.1,SO:0001217,UniParc:UPI000013A92F,UniRef:UniRef100_P0AFR9,UniRef:UniRef50_P0AFR9,UniRef:UniRef90_P0AFR9
contig_1	Pyrodigal	gene	1473171	1474595	.	+	.	ID=GCA000010485_01452_gene;locus_tag=GCA000010485_01452;gene=patD
contig_1	Pyrodigal	CDS	1473171	1474595	.	+	0	ID=GCA000010485_01452;Name=aminobutyraldehyde dehydrogenase;locus_tag=GCA000010485_01452;product=aminobutyraldehyde dehydrogenase;Dbxref=GO:0009447,GO:0019145,GO:0019477,GO:0051287;gene=patD;Parent=GCA000010485_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001163910.1,SO:0001217,UniParc:UPI0001C2290A,UniRef:UniRef100_A0A061KCV1,UniRef:UniRef50_P77674,UniRef:UniRef90_P77674;ec_number=1.2.1.19
contig_1	Pyrodigal	gene	1474983	1475156	.	+	.	ID=GCA000010485_01453_gene;locus_tag=GCA000010485_01453;gene=ortT
contig_1	Pyrodigal	CDS	1474983	1475156	.	+	0	ID=GCA000010485_01453;Name=orphan toxin OrtT;locus_tag=GCA000010485_01453;product=orphan toxin OrtT;Dbxref=GO:0001896,GO:0005886;gene=ortT;Parent=GCA000010485_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000061178,RefSeq:WP_001468162.1,SO:0001217,UniParc:UPI000281D7DB,UniRef:UniRef100_A0A1U9TNH7,UniRef:UniRef50_P64453,UniRef:UniRef90_P64453
contig_1	Pyrodigal	gene	1475242	1475475	.	+	.	ID=GCA000010485_01454_gene;locus_tag=GCA000010485_01454;gene=ydcY
contig_1	Pyrodigal	CDS	1475242	1475475	.	+	0	ID=GCA000010485_01454;Name=putative protein YdcY;locus_tag=GCA000010485_01454;product=putative protein YdcY;Dbxref=GO:0005829;gene=ydcY;Parent=GCA000010485_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000018633.1,SO:0001217,UniParc:UPI000013A932,UniRef:UniRef100_P64455,UniRef:UniRef50_P64455,UniRef:UniRef90_P64455
contig_1	Pyrodigal	gene	1475476	1475925	.	-	.	ID=GCA000010485_01455_gene;locus_tag=GCA000010485_01455;gene=ydcZ
contig_1	Pyrodigal	CDS	1475476	1475925	.	-	0	ID=GCA000010485_01455;Name=DMT family transporter;locus_tag=GCA000010485_01455;product=DMT family transporter;gene=ydcZ;Parent=GCA000010485_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3238,COG:S,KEGG:K09936,RefSeq:WP_001076540.1,SO:0001217,UniParc:UPI00000DEB79,UniRef:UniRef100_A0A023LA21,UniRef:UniRef50_B7LQS7,UniRef:UniRef90_B7LQS7
contig_1	Pyrodigal	gene	1475922	1476440	.	-	.	ID=GCA000010485_01456_gene;locus_tag=GCA000010485_01456;gene=mddA
contig_1	Pyrodigal	CDS	1475922	1476440	.	-	0	ID=GCA000010485_01456;Name=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;locus_tag=GCA000010485_01456;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;gene=mddA;Parent=GCA000010485_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000155373,COG:COG1247,COG:E,RefSeq:WP_000027563.1,SO:0001217,UniParc:UPI00000D0785,UniRef:UniRef100_C3TAM2,UniRef:UniRef50_C3TAM2,UniRef:UniRef90_C3TAM2
contig_1	Pyrodigal	gene	1476647	1476883	.	+	.	ID=GCA000010485_01457_gene;locus_tag=GCA000010485_01457;gene=mcbR
contig_1	Pyrodigal	CDS	1476647	1476883	.	+	0	ID=GCA000010485_01457;Name=HTH-type transcriptional regulator mcbR;locus_tag=GCA000010485_01457;product=HTH-type transcriptional regulator mcbR;gene=mcbR;Parent=GCA000010485_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C2290B,UniRef:UniRef100_A0A061KEZ3,UniRef:UniRef50_A0A376W4L0,UniRef:UniRef90_A0A376W4L0
contig_1	Pyrodigal	gene	1476921	1479023	.	-	.	ID=GCA000010485_01458_gene;locus_tag=GCA000010485_01458;gene=pqqU
contig_1	Pyrodigal	CDS	1476921	1479023	.	-	0	ID=GCA000010485_01458;Name=TonB-dependent receptor PqqU;locus_tag=GCA000010485_01458;product=TonB-dependent receptor PqqU;Dbxref=GO:0009279,GO:0015344,GO:0016020,GO:0030003,GO:0038023,GO:0044718,GO:1902495;gene=pqqU;Parent=GCA000010485_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000689323.1,SO:0001217,UniParc:UPI0001C2290C,UniRef:UniRef100_A0A7I0KQK4,UniRef:UniRef50_P76115,UniRef:UniRef90_P76115
contig_1	Pyrodigal	gene	1479265	1480326	.	+	.	ID=GCA000010485_01459_gene;locus_tag=GCA000010485_01459;gene=yncE
contig_1	Pyrodigal	CDS	1479265	1480326	.	+	0	ID=GCA000010485_01459;Name=putative protein YncE;locus_tag=GCA000010485_01459;product=putative protein YncE;Dbxref=GO:0003677,GO:0030288;gene=yncE;Parent=GCA000010485_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3391,COG:R,RefSeq:WP_000550656.1,SO:0001217,UniParc:UPI0001C2290D,UniRef:UniRef100_A0A061KAB2,UniRef:UniRef50_P76116,UniRef:UniRef90_P76116
contig_1	Pyrodigal	gene	1480439	1481938	.	-	.	ID=GCA000010485_01460_gene;locus_tag=GCA000010485_01460;gene=ansP
contig_1	Pyrodigal	CDS	1480439	1481938	.	-	0	ID=GCA000010485_01460;Name=L-asparagine permease;locus_tag=GCA000010485_01460;product=L-asparagine permease;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0055085;gene=ansP;Parent=GCA000010485_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_001296060.1,SO:0001217,UniParc:UPI0001C2290E,UniRef:UniRef100_A0A061K9W9,UniRef:UniRef50_P77610,UniRef:UniRef90_P77610
contig_1	Pyrodigal	gene	1482750	1483886	.	+	.	ID=GCA000010485_01461_gene;locus_tag=GCA000010485_01461;gene=tnp
contig_1	Pyrodigal	CDS	1482750	1483886	.	+	0	ID=GCA000010485_01461;Name=ISAs1 family ISEc1 transposase;locus_tag=GCA000010485_01461;product=ISAs1 family ISEc1 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000010485_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc1,RefSeq:WP_000420759.1,SO:0001217,UniParc:UPI0001C2290F,UniRef:UniRef100_A0A061KEH8,UniRef:UniRef50_P75741,UniRef:UniRef90_P75741
contig_1	Pyrodigal	gene	1483957	1484526	.	-	.	ID=GCA000010485_01462_gene;locus_tag=GCA000010485_01462;gene=yddH
contig_1	Pyrodigal	CDS	1483957	1484526	.	-	0	ID=GCA000010485_01462;Name=putative protein YddH;locus_tag=GCA000010485_01462;product=putative protein YddH;Dbxref=GO:0010181,GO:0016646;gene=yddH;Parent=GCA000010485_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000077275.1,SO:0001217,UniParc:UPI0001C22910,UniRef:UniRef100_A0A061KEY6,UniRef:UniRef50_P76121,UniRef:UniRef90_P76121
contig_1	Pyrodigal	gene	1484701	1485546	.	+	.	ID=GCA000010485_01463_gene;locus_tag=GCA000010485_01463;gene=nhoA
contig_1	Pyrodigal	CDS	1484701	1485546	.	+	0	ID=GCA000010485_01463;Name=N-hydroxyarylamine O-acetyltransferase;locus_tag=GCA000010485_01463;product=N-hydroxyarylamine O-acetyltransferase;Dbxref=GO:0016407;gene=nhoA;Parent=GCA000010485_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00675,RefSeq:WP_000187880.1,SO:0001217,UniParc:UPI0001C22911,UniRef:UniRef100_A0A066SRC1,UniRef:UniRef50_P77567,UniRef:UniRef90_A0A085NXJ9;ec_number=2.3.1.118
contig_1	Pyrodigal	gene	1485642	1486535	.	-	.	ID=GCA000010485_01464_gene;locus_tag=GCA000010485_01464;gene=yddE
contig_1	Pyrodigal	CDS	1485642	1486535	.	-	0	ID=GCA000010485_01464;Name=PhzF family isomerase;locus_tag=GCA000010485_01464;product=PhzF family isomerase;Dbxref=GO:0003824,GO:0005737,GO:0009058,GO:0016853,GO:0042803;gene=yddE;Parent=GCA000010485_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0384,COG:R,KEGG:K06998,RefSeq:WP_000804430.1,SO:0001217,UniParc:UPI0001C22912,UniRef:UniRef100_A0A066SZR2,UniRef:UniRef50_P37757,UniRef:UniRef90_P37757;ec_number=5.1.-.-
contig_1	Pyrodigal	gene	1486615	1487295	.	-	.	ID=GCA000010485_01465_gene;locus_tag=GCA000010485_01465;gene=narI
contig_1	Pyrodigal	CDS	1486615	1487295	.	-	0	ID=GCA000010485_01465;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000010485_01465;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0008940,GO:0009325,GO:0019645;gene=narI;Parent=GCA000010485_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2181,COG:CP,RefSeq:WP_000617136.1,SO:0001217,UniParc:UPI000187BD6D,UniRef:UniRef100_E2QM21,UniRef:UniRef50_A0A6G6GYU7,UniRef:UniRef90_E2QM21;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1487292	1487987	.	-	.	ID=GCA000010485_01466_gene;locus_tag=GCA000010485_01466;gene=narW
contig_1	Pyrodigal	CDS	1487292	1487987	.	-	0	ID=GCA000010485_01466;Name=nitrate reductase molybdenum cofactor assembly chaperone;locus_tag=GCA000010485_01466;product=nitrate reductase molybdenum cofactor assembly chaperone;Dbxref=GO:0005737,GO:0016530,GO:0042128,GO:0051082,GO:0051131;gene=narW;Parent=GCA000010485_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2180,COG:CPO,KEGG:K00373,RefSeq:WP_001166384.1,SO:0001217,UniParc:UPI0001C22913,UniRef:UniRef100_A0A066SV00,UniRef:UniRef50_P19317,UniRef:UniRef90_P19317
contig_1	Pyrodigal	gene	1487987	1489531	.	-	.	ID=GCA000010485_01467_gene;locus_tag=GCA000010485_01467;gene=narH
contig_1	Pyrodigal	CDS	1487987	1489531	.	-	0	ID=GCA000010485_01467;Name=nitrate reductase subunit beta;locus_tag=GCA000010485_01467;product=nitrate reductase subunit beta;Dbxref=GO:0005886,GO:0006974,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0016020,GO:0019645,GO:0042126,GO:0042128,GO:0046872,GO:0051536,GO:0051538,GO:0051539,GO:0160182;gene=narH;Parent=GCA000010485_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1140,COG:CP,KEGG:K00371,RefSeq:WP_000702528.1,SO:0001217,UniParc:UPI000191E79E,UniRef:UniRef100_E2QM23,UniRef:UniRef50_P19318,UniRef:UniRef90_P19318;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1489528	1493268	.	-	.	ID=GCA000010485_01468_gene;locus_tag=GCA000010485_01468;gene=narZ
contig_1	Pyrodigal	CDS	1489528	1493268	.	-	0	ID=GCA000010485_01468;Name=nitrate reductase Z subunit alpha;locus_tag=GCA000010485_01468;product=nitrate reductase Z subunit alpha;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narZ;Parent=GCA000010485_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000040458,KEGG:K00370,RefSeq:WP_001296061.1,SO:0001217,UniParc:UPI0001C22914,UniRef:UniRef100_A0A066SRB4,UniRef:UniRef50_A0AA38XI32,UniRef:UniRef90_A0A1X3J1T2;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1493363	1494751	.	-	.	ID=GCA000010485_01469_gene;locus_tag=GCA000010485_01469;gene=narU
contig_1	Pyrodigal	CDS	1493363	1494751	.	-	0	ID=GCA000010485_01469;Name=nitrate/nitrite transporter NarU;locus_tag=GCA000010485_01469;product=nitrate/nitrite transporter NarU;Dbxref=GO:0005886,GO:0015112,GO:0015514,GO:0015706,GO:0015707,GO:0042128;gene=narU;Parent=GCA000010485_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001207901,KEGG:K02575,RefSeq:WP_001207907.1,SO:0001217,UniParc:UPI0000D50920,UniRef:UniRef100_E2QM25,UniRef:UniRef50_P10903,UniRef:UniRef90_P37758
contig_1	Pyrodigal	gene	1495024	1495848	.	-	.	ID=GCA000010485_01470_gene;locus_tag=GCA000010485_01470;gene=yddG
contig_1	Pyrodigal	CDS	1495024	1495848	.	-	0	ID=GCA000010485_01470;Name=aromatic amino acid efflux DMT transporter YddG;locus_tag=GCA000010485_01470;product=aromatic amino acid efflux DMT transporter YddG;Dbxref=GO:0005886,GO:0015171,GO:0015173,GO:0016020,GO:0032973;gene=yddG;Parent=GCA000010485_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000198205,BlastRules:WP_000203799,COG:COG0697,COG:GER,SO:0001217,UniRef:UniRef50_P46136,UniRef:UniRef90_P46136
contig_1	Pyrodigal	gene	1496137	1499184	.	+	.	ID=GCA000010485_01471_gene;locus_tag=GCA000010485_01471;gene=fdnG
contig_1	Pyrodigal	CDS	1496137	1499184	.	+	0	ID=GCA000010485_01471;Name=formate dehydrogenase-N subunit alpha;locus_tag=GCA000010485_01471;product=formate dehydrogenase-N subunit alpha;Dbxref=GO:0006788,GO:0008430,GO:0008863,GO:0009055,GO:0009061,GO:0009326,GO:0015942,GO:0015944,GO:0016020,GO:0019645,GO:0030151,GO:0030288,GO:0036397,GO:0043546,GO:0047111,GO:0051539;gene=fdnG;Parent=GCA000010485_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_011478186.1,SO:0001217,UniParc:UPI0000D50921,UniRef:UniRef100_A0A2J1B5Z6,UniRef:UniRef50_P24183,UniRef:UniRef90_P24183,codon on position 196 is a selenocysteine codon;ec_number=1.17.5.3;transl_except=(pos:1496722..1496724%2Caa:Sec)
contig_1	Infernal	regulatory_region	1496719	1496777	2.3e-13	+	.	ID=EFPPCJGBKI_311;Name=Selenocysteine insertion sequence 3;product=Selenocysteine insertion sequence 3;Dbxref=RFAM:RF01989;inference=profile:Rfam:RF01989;Note=SO:1001268;regulatory_class=recoding_stimulatory_region
contig_1	Pyrodigal	gene	1499197	1500081	.	+	.	ID=GCA000010485_01472_gene;locus_tag=GCA000010485_01472;gene=fdnH
contig_1	Pyrodigal	CDS	1499197	1500081	.	+	0	ID=GCA000010485_01472;Name=formate dehydrogenase N subunit beta;locus_tag=GCA000010485_01472;product=formate dehydrogenase N subunit beta;Dbxref=GO:0008863,GO:0015944,GO:0016020,GO:0051539;gene=fdnH;Parent=GCA000010485_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001240582,COG:C,COG:COG0437,KEGG:K08349,RefSeq:WP_001240585.1,SO:0001217,UniParc:UPI0001C22916,UniRef:UniRef100_A0A066SRA7,UniRef:UniRef50_P44450,UniRef:UniRef90_A0A370V5L4;ec_number=1.17.5.3
contig_1	Pyrodigal	gene	1500074	1500727	.	+	.	ID=GCA000010485_01473_gene;locus_tag=GCA000010485_01473;gene=fdnI
contig_1	Pyrodigal	CDS	1500074	1500727	.	+	0	ID=GCA000010485_01473;Name=formate dehydrogenase-N subunit gamma;locus_tag=GCA000010485_01473;product=formate dehydrogenase-N subunit gamma;Dbxref=GO:0005886,GO:0008863,GO:0009055,GO:0009061,GO:0009326,GO:0015944,GO:0022904,GO:0036397,GO:0046872;gene=fdnI;Parent=GCA000010485_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2864,KEGG:K08350,RefSeq:WP_000045646.1,SO:0001217,UniParc:UPI00000DEB93,UniRef:UniRef100_A0A066SZQ1,UniRef:UniRef50_P0AEK7,UniRef:UniRef90_P0AEK7;ec_number=1.17.5.3
contig_1	Pyrodigal	gene	1500777	1501061	.	-	.	ID=GCA000010485_01474_gene;locus_tag=GCA000010485_01474;gene=yddM
contig_1	Pyrodigal	CDS	1500777	1501061	.	-	0	ID=GCA000010485_01474;Name=HigA family addiction module antitoxin;locus_tag=GCA000010485_01474;product=HigA family addiction module antitoxin;Dbxref=GO:0003677,GO:0006355;gene=yddM;Parent=GCA000010485_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3093,COG:V,RefSeq:WP_000781370.1,SO:0001217,UniParc:UPI000013A93F,UniRef:UniRef100_P67699,UniRef:UniRef50_P67699,UniRef:UniRef90_P67699
contig_1	Pyrodigal	gene	1501434	1501604	.	+	.	ID=GCA000010485_01475_gene;locus_tag=GCA000010485_01475
contig_1	Pyrodigal	CDS	1501434	1501604	.	+	0	ID=GCA000010485_01475;Name=hypothetical protein;locus_tag=GCA000010485_01475;product=hypothetical protein;Parent=GCA000010485_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_S1PAI7,UniRef:UniRef90_S1PAI7
contig_1	Pyrodigal	gene	1501524	1502534	.	-	.	ID=GCA000010485_01476_gene;locus_tag=GCA000010485_01476;gene=adhP
contig_1	Pyrodigal	CDS	1501524	1502534	.	-	0	ID=GCA000010485_01476;Name=alcohol dehydrogenase AdhP;locus_tag=GCA000010485_01476;product=alcohol dehydrogenase AdhP;Dbxref=GO:0004022,GO:0006974,GO:0008270,GO:0045471,GO:0046187;gene=adhP;Parent=GCA000010485_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1064,COG:G,KEGG:K13953,RefSeq:WP_000642417.1,SO:0001217,UniParc:UPI0001C22918,UniRef:UniRef100_A0A066SR19,UniRef:UniRef50_P39451,UniRef:UniRef90_P39451;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	1502668	1504365	.	-	.	ID=GCA000010485_01477_gene;locus_tag=GCA000010485_01477;gene=maeA
contig_1	Pyrodigal	CDS	1502668	1504365	.	-	0	ID=GCA000010485_01477;Name=malate dehydrogenase;locus_tag=GCA000010485_01477;product=malate dehydrogenase;Dbxref=GO:0004471,GO:0005829,GO:0006090,GO:0006108,GO:0008948,GO:0046872,GO:0051287;gene=maeA;Parent=GCA000010485_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000433476,COG:C,COG:COG0281,RefSeq:WP_000433462.1,SO:0001217,UniParc:UPI00005EF9D6,UniRef:UniRef100_B7URL9,UniRef:UniRef50_P26616,UniRef:UniRef90_P26616;ec_number=1.1.1.38
contig_1	Pyrodigal	gene	1504521	1504658	.	-	.	ID=GCA000010485_01478_gene;locus_tag=GCA000010485_01478;gene=sra
contig_1	Pyrodigal	CDS	1504521	1504658	.	-	0	ID=GCA000010485_01478;Name=stationary-phase-induced ribosome-associated protein;locus_tag=GCA000010485_01478;product=stationary-phase-induced ribosome-associated protein;Dbxref=GO:0006412;gene=sra;Parent=GCA000010485_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02972,RefSeq:WP_000841554.1,SO:0001217,UniParc:UPI0000134E93,UniRef:UniRef100_P68191,UniRef:UniRef50_P68191,UniRef:UniRef90_P68191
contig_1	Pyrodigal	gene	1504760	1504975	.	-	.	ID=GCA000010485_01479_gene;locus_tag=GCA000010485_01479;gene=bdm
contig_1	Pyrodigal	CDS	1504760	1504975	.	-	0	ID=GCA000010485_01479;Name=biofilm-dependent modulation protein;locus_tag=GCA000010485_01479;product=biofilm-dependent modulation protein;gene=bdm;Parent=GCA000010485_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495766.1,SO:0001217,UniParc:UPI0000126877,UniRef:UniRef100_P65640,UniRef:UniRef50_P76127,UniRef:UniRef90_P65640
contig_1	Pyrodigal	gene	1505318	1505749	.	+	.	ID=GCA000010485_01480_gene;locus_tag=GCA000010485_01480;gene=osmC
contig_1	Pyrodigal	CDS	1505318	1505749	.	+	0	ID=GCA000010485_01480;Name=peroxiredoxin OsmC;locus_tag=GCA000010485_01480;product=peroxiredoxin OsmC;Dbxref=GO:0005737,GO:0006979,GO:0051920;gene=osmC;Parent=GCA000010485_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000152305,RefSeq:WP_000152305.1,SO:0001217,UniParc:UPI00001639C3,UniRef:UniRef100_P0C0L2,UniRef:UniRef50_P0C0L2,UniRef:UniRef90_P0C0L2;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1505939	1508338	.	-	.	ID=GCA000010485_01481_gene;locus_tag=GCA000010485_01481;gene=dosP
contig_1	Pyrodigal	CDS	1505939	1508338	.	-	0	ID=GCA000010485_01481;Name=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;locus_tag=GCA000010485_01481;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;Dbxref=GO:0000287,GO:0019826,GO:0020037,GO:0042803,GO:0070482,GO:0071111;gene=dosP;Parent=GCA000010485_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13243,RefSeq:WP_001296069.1,SO:0001217,UniParc:UPI0001C22919,UniRef:UniRef100_A0A2X2ZVZ0,UniRef:UniRef50_P76129,UniRef:UniRef90_P76129;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	1508904	1510223	.	-	.	ID=GCA000010485_01482_gene;locus_tag=GCA000010485_01482;gene=digH
contig_1	Pyrodigal	CDS	1508904	1510223	.	-	0	ID=GCA000010485_01482;Name=Glycosyl hydrolase DigH;locus_tag=GCA000010485_01482;product=Glycosyl hydrolase DigH;Dbxref=GO:0009279,GO:0016798,GO:0071555;gene=digH;Parent=GCA000010485_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1649,COG:D,RefSeq:WP_000350365.1,SO:0001217,UniParc:UPI0001C2291B,UniRef:UniRef100_A0A1U9TNK6,UniRef:UniRef50_P64426,UniRef:UniRef90_P64426;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	1510354	1511889	.	-	.	ID=GCA000010485_01483_gene;locus_tag=GCA000010485_01483;gene=gadC
contig_1	Pyrodigal	CDS	1510354	1511889	.	-	0	ID=GCA000010485_01483;Name=acid resistance gamma-aminobutyrate antiporter GadC;locus_tag=GCA000010485_01483;product=acid resistance gamma-aminobutyrate antiporter GadC;Dbxref=GO:0005886,GO:0006865,GO:0015297,GO:0016020;gene=gadC;Parent=GCA000010485_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000246019,COG:COG0531,COG:E,KEGG:K20265,RefSeq:WP_000246011.1,SO:0001217,UniParc:UPI0000D50929,UniRef:UniRef100_E2QM40,UniRef:UniRef50_P63235,UniRef:UniRef90_P63235
contig_1	Pyrodigal	gene	1512045	1513445	.	-	.	ID=GCA000010485_01484_gene;locus_tag=GCA000010485_01484;gene=gadB
contig_1	Pyrodigal	CDS	1512045	1513445	.	-	0	ID=GCA000010485_01484;Name=glutamate decarboxylase;locus_tag=GCA000010485_01484;product=glutamate decarboxylase;Dbxref=GO:0004351,GO:0005829,GO:0006538,GO:0006540,GO:0030170;gene=gadB;Parent=GCA000010485_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0076,COG:E,RefSeq:WP_000358930.1,SO:0001217,UniParc:UPI0000128FA6,UniRef:UniRef100_P69910,UniRef:UniRef50_P69910,UniRef:UniRef90_P69910;ec_number=4.1.1.15
contig_1	Pyrodigal	gene	1513807	1514616	.	-	.	ID=GCA000010485_01485_gene;locus_tag=GCA000010485_01485;gene=pqqL
contig_1	Pyrodigal	CDS	1513807	1514616	.	-	0	ID=GCA000010485_01485;Name=putative zinc protease PqqL;locus_tag=GCA000010485_01485;product=putative zinc protease PqqL;Dbxref=GO:0004222,GO:0005829,GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0030288;gene=pqqL;Parent=GCA000010485_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A2F0D2,UniRef:UniRef100_A0AA36P7W4,UniRef:UniRef50_P31828,UniRef:UniRef90_P31828;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1514730	1515887	.	-	.	ID=GCA000010485_01486_gene;locus_tag=GCA000010485_01486;gene=ydeM
contig_1	Pyrodigal	CDS	1514730	1515887	.	-	0	ID=GCA000010485_01486;Name=anaerobic sulfatase maturase;locus_tag=GCA000010485_01486;product=anaerobic sulfatase maturase;Dbxref=GO:0006974,GO:0016491,GO:0018209,GO:0046500,GO:0046872,GO:0051539,GO:0051604;gene=ydeM;Parent=GCA000010485_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24118,RefSeq:WP_001296071.1,SO:0001217,UniParc:UPI0000DACE47,UniRef:UniRef100_A0A061KV67,UniRef:UniRef50_P76134,UniRef:UniRef90_P76134;ec_number=1.1.98.7
contig_1	Pyrodigal	gene	1515939	1517621	.	-	.	ID=GCA000010485_01487_gene;locus_tag=GCA000010485_01487;gene=ydeN
contig_1	Pyrodigal	CDS	1515939	1517621	.	-	0	ID=GCA000010485_01487;Name=putative sulfatase YdeN;locus_tag=GCA000010485_01487;product=putative sulfatase YdeN;Dbxref=GO:0004065,GO:0030288,GO:0046872;gene=ydeN;Parent=GCA000010485_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296072.1,SO:0001217,UniParc:UPI0000DACE48,UniRef:UniRef100_E2QM44,UniRef:UniRef50_P77318,UniRef:UniRef90_P77318;ec_number=3.1.6.-
contig_1	Pyrodigal	gene	1518023	1518784	.	-	.	ID=GCA000010485_01488_gene;locus_tag=GCA000010485_01488;gene=ydeO
contig_1	Pyrodigal	CDS	1518023	1518784	.	-	0	ID=GCA000010485_01488;Name=acid stress response transcriptional regulator YdeO;locus_tag=GCA000010485_01488;product=acid stress response transcriptional regulator YdeO;Dbxref=GO:0003700,GO:0043565;gene=ydeO;Parent=GCA000010485_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000060495,COG:COG2207,COG:K,RefSeq:WP_000060456.1,SO:0001217,UniParc:UPI0001C22E02,UniRef:UniRef100_A0A066SZF0,UniRef:UniRef50_P76135,UniRef:UniRef90_P76135
contig_1	Pyrodigal	gene	1518859	1519056	.	-	.	ID=GCA000010485_01489_gene;locus_tag=GCA000010485_01489;gene=safA
contig_1	Pyrodigal	CDS	1518859	1519056	.	-	0	ID=GCA000010485_01489;Name=two-component system connector SafA;locus_tag=GCA000010485_01489;product=two-component system connector SafA;Dbxref=GO:0005886;gene=safA;Parent=GCA000010485_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000543384,KEGG:K23236,RefSeq:WP_000543392.1,SO:0001217,UniParc:UPI0001C22E03,UniRef:UniRef100_A0A061YFS9,UniRef:UniRef50_P76136,UniRef:UniRef90_P76136
contig_1	Pyrodigal	gene	1519304	1521583	.	-	.	ID=GCA000010485_01490_gene;locus_tag=GCA000010485_01490;gene=ydeP
contig_1	Pyrodigal	CDS	1519304	1521583	.	-	0	ID=GCA000010485_01490;Name=acid resistance putative oxidoreductase YdeP;locus_tag=GCA000010485_01490;product=acid resistance putative oxidoreductase YdeP;Dbxref=GO:0008863,GO:0016020,GO:0030151,GO:0051539;gene=ydeP;Parent=GCA000010485_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000726691,COG:C,COG:COG0243,RefSeq:WP_000726721.1,SO:0001217,UniParc:UPI0001C22E04,UniRef:UniRef100_A0A192C6F7,UniRef:UniRef50_P77561,UniRef:UniRef90_P77561
contig_1	Pyrodigal	gene	1521922	1522836	.	-	.	ID=GCA000010485_01491_gene;locus_tag=GCA000010485_01491;gene=ydeQ
contig_1	Pyrodigal	CDS	1521922	1522836	.	-	0	ID=GCA000010485_01491;Name=putative fimbrial-like protein YdeQ;locus_tag=GCA000010485_01491;product=putative fimbrial-like protein YdeQ;Dbxref=GO:0009289,GO:0043709;gene=ydeQ;Parent=GCA000010485_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000520600.1,SO:0001217,UniParc:UPI0001C22E05,UniRef:UniRef100_A0A7I0KQD6,UniRef:UniRef50_P77588,UniRef:UniRef90_P77588
contig_1	Pyrodigal	gene	1522896	1523399	.	-	.	ID=GCA000010485_01492_gene;locus_tag=GCA000010485_01492;gene=ydeR
contig_1	Pyrodigal	CDS	1522896	1523399	.	-	0	ID=GCA000010485_01492;Name=putative fimbrial-like protein YdeR;locus_tag=GCA000010485_01492;product=putative fimbrial-like protein YdeR;Dbxref=GO:0009289,GO:0043709;gene=ydeR;Parent=GCA000010485_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07349,RefSeq:WP_000825467.1,SO:0001217,UniParc:UPI00000E49F9,UniRef:UniRef100_A0A061JZI8,UniRef:UniRef50_P77294,UniRef:UniRef90_P77294
contig_1	Pyrodigal	gene	1523412	1523942	.	-	.	ID=GCA000010485_01493_gene;locus_tag=GCA000010485_01493;gene=ydeS
contig_1	Pyrodigal	CDS	1523412	1523942	.	-	0	ID=GCA000010485_01493;Name=putative fimbrial-like protein YdeS;locus_tag=GCA000010485_01493;product=putative fimbrial-like protein YdeS;Dbxref=GO:0009289,GO:0043709;gene=ydeS;Parent=GCA000010485_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07348,RefSeq:WP_000876787.1,SO:0001217,UniParc:UPI0001C22E06,UniRef:UniRef100_A0A3K3UDV8,UniRef:UniRef50_P77789,UniRef:UniRef90_P77789
contig_1	Pyrodigal	gene	1523956	1526607	.	-	.	ID=GCA000010485_01494_gene;locus_tag=GCA000010485_01494;gene=fimA
contig_1	Pyrodigal	CDS	1523956	1526607	.	-	0	ID=GCA000010485_01494;Name=type 1 fimbrial major subunit FimA;locus_tag=GCA000010485_01494;product=type 1 fimbrial major subunit FimA;Dbxref=GO:0007155,GO:0009279,GO:0009289,GO:0009297,GO:0015473;gene=fimA;Parent=GCA000010485_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07347,RefSeq:WP_001545975.1,SO:0001217,UniParc:UPI0001C22E07,UniRef:UniRef100_A0A7I0KQI7,UniRef:UniRef50_P30130,UniRef:UniRef90_P76137
contig_1	Pyrodigal	gene	1526649	1527359	.	-	.	ID=GCA000010485_01495_gene;locus_tag=GCA000010485_01495
contig_1	Pyrodigal	CDS	1526649	1527359	.	-	0	ID=GCA000010485_01495;Name=Fimbria/pilus periplasmic chaperone;locus_tag=GCA000010485_01495;product=Fimbria/pilus periplasmic chaperone;Parent=GCA000010485_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001195177.1,SO:0001217,UniParc:UPI0001C22E08,UniRef:UniRef100_A0A3K2EHS5,UniRef:UniRef50_P31697,UniRef:UniRef90_A0A066RDY2
contig_1	Pyrodigal	gene	1527721	1528284	.	-	.	ID=GCA000010485_01496_gene;locus_tag=GCA000010485_01496;gene=fimA
contig_1	Pyrodigal	CDS	1527721	1528284	.	-	0	ID=GCA000010485_01496;Name=type 1 fimbrial major subunit FimA;locus_tag=GCA000010485_01496;product=type 1 fimbrial major subunit FimA;Dbxref=GO:0007155,GO:0009289;gene=fimA;Parent=GCA000010485_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296074.1,SO:0001217,UniParc:UPI00005EF9C7,UniRef:UniRef100_E2QM53,UniRef:UniRef50_J7QR22,UniRef:UniRef90_J7QR22
contig_1	Pyrodigal	gene	1528975	1529154	.	-	.	ID=GCA000010485_01497_gene;locus_tag=GCA000010485_01497;gene=hipB
contig_1	Pyrodigal	CDS	1528975	1529154	.	-	0	ID=GCA000010485_01497;Name=Regulator with HipB;locus_tag=GCA000010485_01497;product=Regulator with HipB;gene=hipB;Parent=GCA000010485_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A4Q4ICN0,UniRef:UniRef90_A0AA36P518
contig_1	Pyrodigal	gene	1529194	1530516	.	-	.	ID=GCA000010485_01498_gene;locus_tag=GCA000010485_01498;gene=hipA
contig_1	Pyrodigal	CDS	1529194	1530516	.	-	0	ID=GCA000010485_01498;Name=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;locus_tag=GCA000010485_01498;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;Dbxref=GO:0000287,GO:0000976,GO:0001217,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005829,GO:0006355,GO:0022611,GO:0032993,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0040008,GO:0043565,GO:0044010,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0046677,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0110001,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=hipA;Parent=GCA000010485_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001125439,COG:COG3550,COG:T,KEGG:K07154,RefSeq:WP_001125411.1,SO:0001217,UniParc:UPI0001C22E09,UniRef:UniRef100_A0A061YM43,UniRef:UniRef50_P23874,UniRef:UniRef90_P23874;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1530516	1530782	.	-	.	ID=GCA000010485_01499_gene;locus_tag=GCA000010485_01499;gene=hipB
contig_1	Pyrodigal	CDS	1530516	1530782	.	-	0	ID=GCA000010485_01499;Name=type II toxin-antitoxin system antitoxin HipB;locus_tag=GCA000010485_01499;product=type II toxin-antitoxin system antitoxin HipB;Dbxref=GO:0000976,GO:0001046,GO:0001217,GO:0006351,GO:0006355,GO:0032993,GO:0040008,GO:0042803,GO:0043565,GO:0045892,GO:0110001;gene=hipB;Parent=GCA000010485_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001296076.1,SO:0001217,UniParc:UPI0001C22E0A,UniRef:UniRef100_A0A8S0FVE3,UniRef:UniRef50_P23873,UniRef:UniRef90_P23873
contig_1	Pyrodigal	gene	1531090	1531848	.	+	.	ID=GCA000010485_01500_gene;locus_tag=GCA000010485_01500;gene=tam
contig_1	Pyrodigal	CDS	1531090	1531848	.	+	0	ID=GCA000010485_01500;Name=trans-aconitate 2-methyltransferase;locus_tag=GCA000010485_01500;product=trans-aconitate 2-methyltransferase;Dbxref=GO:0005737,GO:0030798,GO:0032259;gene=tam;Parent=GCA000010485_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001286537.1,SO:0001217,UniParc:UPI0001C22E0B,UniRef:UniRef100_A0A066SRJ1,UniRef:UniRef50_P76145,UniRef:UniRef90_Q8FHF2;ec_number=2.1.1.144
contig_1	Pyrodigal	gene	1531852	1532646	.	-	.	ID=GCA000010485_01501_gene;locus_tag=GCA000010485_01501;gene=yneE
contig_1	Pyrodigal	CDS	1531852	1532646	.	-	0	ID=GCA000010485_01501;Name=Voltage-dependent anion channel-forming protein YneE;locus_tag=GCA000010485_01501;product=Voltage-dependent anion channel-forming protein YneE;Dbxref=GO:0005254,GO:0005886,GO:0071978;gene=yneE;Parent=GCA000010485_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08994,SO:0001217,UniRef:UniRef50_P76146,UniRef:UniRef90_P76146
contig_1	Pyrodigal	gene	1532963	1534414	.	-	.	ID=GCA000010485_01502_gene;locus_tag=GCA000010485_01502;gene=uxaB
contig_1	Pyrodigal	CDS	1532963	1534414	.	-	0	ID=GCA000010485_01502;Name=tagaturonate reductase;locus_tag=GCA000010485_01502;product=tagaturonate reductase;Dbxref=GO:0005829,GO:0008926,GO:0009026,GO:0019592,GO:0019698;gene=uxaB;Parent=GCA000010485_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000854633,KEGG:K00041,RefSeq:WP_000854638.1,SO:0001217,UniParc:UPI0001C22E0D,UniRef:UniRef100_A0A066SZG5,UniRef:UniRef50_P0A6L7,UniRef:UniRef90_P0A6L7;ec_number=1.1.1.58
contig_1	Pyrodigal	gene	1534641	1536059	.	-	.	ID=GCA000010485_01503_gene;locus_tag=GCA000010485_01503;gene=dgcF
contig_1	Pyrodigal	CDS	1534641	1536059	.	-	0	ID=GCA000010485_01503;Name=putative diguanylate cyclase DgcF;locus_tag=GCA000010485_01503;product=putative diguanylate cyclase DgcF;Dbxref=GO:0005525,GO:0005886,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcF;Parent=GCA000010485_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000558459.1,SO:0001217,UniParc:UPI0001C22E0E,UniRef:UniRef100_A0A061YM47,UniRef:UniRef50_Q8XAZ4,UniRef:UniRef90_Q8XAZ4;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1536198	1536557	.	-	.	ID=GCA000010485_01504_gene;locus_tag=GCA000010485_01504
contig_1	Pyrodigal	CDS	1536198	1536557	.	-	0	ID=GCA000010485_01504;Name=glutaminase;locus_tag=GCA000010485_01504;product=glutaminase;Parent=GCA000010485_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001191031.1,SO:0001217,UniParc:UPI00000DEBAC,UniRef:UniRef100_A0A377K717,UniRef:UniRef50_A0A377K717,UniRef:UniRef90_A0A377K717
contig_1	Pyrodigal	gene	1536557	1537483	.	-	.	ID=GCA000010485_01505_gene;locus_tag=GCA000010485_01505;gene=glsB
contig_1	Pyrodigal	CDS	1536557	1537483	.	-	0	ID=GCA000010485_01505;Name=glutaminase B;locus_tag=GCA000010485_01505;product=glutaminase B;Dbxref=GO:0004359,GO:0006537,GO:0006541,GO:0006543;gene=glsB;Parent=GCA000010485_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2066,COG:E,RefSeq:WP_000257409.1,SO:0001217,UniParc:UPI000012B7E5,UniRef:UniRef100_P0A6W0,UniRef:UniRef50_P0A6W0,UniRef:UniRef90_P0A6W0;ec_number=3.5.1.2
contig_1	Pyrodigal	gene	1537547	1538935	.	-	.	ID=GCA000010485_01506_gene;locus_tag=GCA000010485_01506;gene=sad
contig_1	Pyrodigal	CDS	1537547	1538935	.	-	0	ID=GCA000010485_01506;Name=succinate-semialdehyde dehydrogenase;locus_tag=GCA000010485_01506;product=succinate-semialdehyde dehydrogenase;Dbxref=GO:0004030,GO:0004777,GO:0006527,GO:0009013,GO:0009447,GO:0009450,GO:0036243,GO:0042803,GO:0070458;gene=sad;Parent=GCA000010485_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001296078.1,SO:0001217,UniParc:UPI0001C22E0F,UniRef:UniRef100_A0A066SVG8,UniRef:UniRef50_P76149,UniRef:UniRef90_P76149;ec_number=1.2.1.24
contig_1	Pyrodigal	gene	1539036	1539917	.	+	.	ID=GCA000010485_01507_gene;locus_tag=GCA000010485_01507;gene=ptrR
contig_1	Pyrodigal	CDS	1539036	1539917	.	+	0	ID=GCA000010485_01507;Name=putrescine utilization regulator PtrR;locus_tag=GCA000010485_01507;product=putrescine utilization regulator PtrR;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=ptrR;Parent=GCA000010485_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000366508.1,SO:0001217,UniParc:UPI0001C22E10,UniRef:UniRef100_A0A061YN68,UniRef:UniRef50_P77309,UniRef:UniRef90_P77309
contig_1	Pyrodigal	gene	1540256	1541446	.	+	.	ID=GCA000010485_01508_gene;locus_tag=GCA000010485_01508;gene=ydeA
contig_1	Pyrodigal	CDS	1540256	1541446	.	+	0	ID=GCA000010485_01508;Name=L-arabinose MFS transporter;locus_tag=GCA000010485_01508;product=L-arabinose MFS transporter;Dbxref=GO:0005886,GO:0015144,GO:0022857,GO:0055085;gene=ydeA;Parent=GCA000010485_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000210799,KEGG:K08159,RefSeq:WP_000210776.1,SO:0001217,UniParc:UPI0001C22E11,UniRef:UniRef100_A0A066SRV8,UniRef:UniRef50_P31122,UniRef:UniRef90_P31122
contig_1	Pyrodigal	gene	1541471	1542136	.	-	.	ID=GCA000010485_01509_gene;locus_tag=GCA000010485_01509;gene=marC
contig_1	Pyrodigal	CDS	1541471	1542136	.	-	0	ID=GCA000010485_01509;Name=NAAT family transporter MarC;locus_tag=GCA000010485_01509;product=NAAT family transporter MarC;Dbxref=GO:0005886,GO:0016020;gene=marC;Parent=GCA000010485_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000885033,COG:COG2095,COG:E,KEGG:K05595,RefSeq:WP_000885036.1,SO:0001217,UniParc:UPI0001C22E12,UniRef:UniRef100_A0A061L0F7,UniRef:UniRef50_P0AEY1,UniRef:UniRef90_P0AEY1
contig_1	Pyrodigal	gene	1542348	1542782	.	+	.	ID=GCA000010485_01510_gene;locus_tag=GCA000010485_01510;gene=marR
contig_1	Pyrodigal	CDS	1542348	1542782	.	+	0	ID=GCA000010485_01510;Name=multiple antibiotic resistance transcriptional regulator MarR;locus_tag=GCA000010485_01510;product=multiple antibiotic resistance transcriptional regulator MarR;gene=marR;Parent=GCA000010485_01510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K03712,RefSeq:WP_000843419.1,SO:0001217,UniParc:UPI00000BABC5,UniRef:UniRef100_Q9AGA4,UniRef:UniRef50_P27245,UniRef:UniRef90_Q9AGA4
contig_1	Pyrodigal	gene	1542803	1543186	.	+	.	ID=GCA000010485_01511_gene;locus_tag=GCA000010485_01511;gene=marA
contig_1	Pyrodigal	CDS	1542803	1543186	.	+	0	ID=GCA000010485_01511;Name=MDR efflux pump AcrAB transcriptional activator MarA;locus_tag=GCA000010485_01511;product=MDR efflux pump AcrAB transcriptional activator MarA;Dbxref=GO:0003700,GO:0043565,GO:0046677;gene=marA;Parent=GCA000010485_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,KEGG:K13632,RefSeq:WP_000091198.1,SO:0001217,UniParc:UPI0000DACE4F,UniRef:UniRef100_A0A0D6IMV2,UniRef:UniRef50_P0A2S4,UniRef:UniRef90_P0A2S4
contig_1	Pyrodigal	gene	1543218	1543436	.	+	.	ID=GCA000010485_01512_gene;locus_tag=GCA000010485_01512;gene=marB
contig_1	Pyrodigal	CDS	1543218	1543436	.	+	0	ID=GCA000010485_01512;Name=multiple antibiotic resistance protein MarB;locus_tag=GCA000010485_01512;product=multiple antibiotic resistance protein MarB;Dbxref=GO:0030288,GO:0046677;gene=marB;Parent=GCA000010485_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000803536.1,SO:0001217,UniParc:UPI00005EFCB4,UniRef:UniRef100_A0A067HGP2,UniRef:UniRef50_P31121,UniRef:UniRef90_P31121
contig_1	Pyrodigal	gene	1543467	1544366	.	-	.	ID=GCA000010485_01513_gene;locus_tag=GCA000010485_01513;gene=eamA
contig_1	Pyrodigal	CDS	1543467	1544366	.	-	0	ID=GCA000010485_01513;Name=O-acetylserine/cysteine exporter;locus_tag=GCA000010485_01513;product=O-acetylserine/cysteine exporter;Dbxref=GO:0005886,GO:0015562,GO:0016020,GO:0033228,GO:0070301;gene=eamA;Parent=GCA000010485_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15268,RefSeq:WP_000087236.1,SO:0001217,UniParc:UPI0001C22E13,UniRef:UniRef100_A0A061YM55,UniRef:UniRef50_P31125,UniRef:UniRef90_P31125
contig_1	Pyrodigal	gene	1544561	1545748	.	+	.	ID=GCA000010485_01514_gene;locus_tag=GCA000010485_01514;gene=ydeE
contig_1	Pyrodigal	CDS	1544561	1545748	.	+	0	ID=GCA000010485_01514;Name=efflux MFS transporter YdeE;locus_tag=GCA000010485_01514;product=efflux MFS transporter YdeE;Dbxref=GO:0005886,GO:0015031,GO:0022857,GO:0035442,GO:0055085,GO:0071916;gene=ydeE;Parent=GCA000010485_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001054182.1,SO:0001217,UniParc:UPI0001C22E14,UniRef:UniRef100_A0A061L0F2,UniRef:UniRef50_P31126,UniRef:UniRef90_P31126
contig_1	Pyrodigal	gene	1545875	1545970	.	+	.	ID=GCA000010485_01515_gene;locus_tag=GCA000010485_01515;gene=mgtS
contig_1	Pyrodigal	CDS	1545875	1545970	.	+	0	ID=GCA000010485_01515;Name=protein MgtS;locus_tag=GCA000010485_01515;product=protein MgtS;Dbxref=GO:0005886,GO:0010350,GO:0010960;gene=mgtS;Parent=GCA000010485_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000901367,RefSeq:WP_000901367.1,SO:0001217,UniParc:UPI00000502F7,UniRef:UniRef100_A5A616,UniRef:UniRef50_A5A616,UniRef:UniRef90_A5A616
contig_1	Infernal	gene	1545964	1546177	.	-	.	ID=GCA000010485_01516_gene;locus_tag=GCA000010485_01516;gene=STnc560
contig_1	Infernal	ncRNA	1545964	1546177	6.8e-47	-	.	ID=GCA000010485_01516;Name=STnc560 Hfq binding RNA;locus_tag=GCA000010485_01516;product=STnc560 Hfq binding RNA;Dbxref=RFAM:RF01407;Parent=GCA000010485_01516_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01407
contig_1	Pyrodigal	gene	1546189	1547079	.	-	.	ID=GCA000010485_01517_gene;locus_tag=GCA000010485_01517;gene=dgcZ
contig_1	Pyrodigal	CDS	1546189	1547079	.	-	0	ID=GCA000010485_01517;Name=diguanylate cyclase DgcZ;locus_tag=GCA000010485_01517;product=diguanylate cyclase DgcZ;Dbxref=GO:0005525,GO:0005886,GO:0008270,GO:0042802,GO:0042803,GO:0043709,GO:0052621,GO:0060187,GO:1900233,GO:1902201,GO:1902209;gene=dgcZ;Parent=GCA000010485_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000592814,COG:COG2199,COG:T,RefSeq:WP_000592832.1,SO:0001217,UniParc:UPI000187BB5D,UniRef:UniRef100_A0A061YJQ4,UniRef:UniRef50_P31129,UniRef:UniRef90_P31129;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1547586	1549631	.	-	.	ID=GCA000010485_01518_gene;locus_tag=GCA000010485_01518;gene=dcp
contig_1	Pyrodigal	CDS	1547586	1549631	.	-	0	ID=GCA000010485_01518;Name=peptidyl-dipeptidase Dcp;locus_tag=GCA000010485_01518;product=peptidyl-dipeptidase Dcp;Dbxref=GO:0004180,GO:0004222,GO:0005737,GO:0005829,GO:0006508,GO:0008237,GO:0030288,GO:0046872;gene=dcp;Parent=GCA000010485_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0339,COG:O,KEGG:K01284,RefSeq:WP_001296080.1,SO:0001217,UniParc:UPI0001C22E15,UniRef:UniRef100_A0A066T094,UniRef:UniRef50_P24171,UniRef:UniRef90_P24171;ec_number=3.4.15.5
contig_1	Pyrodigal	gene	1549768	1550514	.	+	.	ID=GCA000010485_01519_gene;locus_tag=GCA000010485_01519;gene=ydfG
contig_1	Pyrodigal	CDS	1549768	1550514	.	+	0	ID=GCA000010485_01519;Name=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;locus_tag=GCA000010485_01519;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;Dbxref=GO:0005829,GO:0016491,GO:0035527;gene=ydfG;Parent=GCA000010485_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_001296081.1,SO:0001217,UniParc:UPI000049E3B2,UniRef:UniRef100_Q8FHD2,UniRef:UniRef50_P39831,UniRef:UniRef90_Q8FHD2;ec_number=1.1.1.381
contig_1	Pyrodigal	gene	1550603	1551289	.	+	.	ID=GCA000010485_01520_gene;locus_tag=GCA000010485_01520;gene=ydfH
contig_1	Pyrodigal	CDS	1550603	1551289	.	+	0	ID=GCA000010485_01520;Name=DNA-binding transcriptional regulator YdfH;locus_tag=GCA000010485_01520;product=DNA-binding transcriptional regulator YdfH;Dbxref=GO:0003677,GO:0003700;gene=ydfH;Parent=GCA000010485_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000215549,COG:COG1802,COG:K,RefSeq:WP_000215549.1,SO:0001217,UniParc:UPI000013A974,UniRef:UniRef100_P0ACM2,UniRef:UniRef50_P0ACM2,UniRef:UniRef90_P0ACM2
contig_1	Pyrodigal	gene	1551466	1551669	.	+	.	ID=GCA000010485_01521_gene;locus_tag=GCA000010485_01521;gene=ydfZ
contig_1	Pyrodigal	CDS	1551466	1551669	.	+	0	ID=GCA000010485_01521;Name=Putative selenoprotein YdfZ;locus_tag=GCA000010485_01521;product=Putative selenoprotein YdfZ;Dbxref=GO:0005829;gene=ydfZ;Parent=GCA000010485_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214712.1,SO:0001217,UniParc:UPI000013A97E,UniRef:UniRef100_P64463,UniRef:UniRef50_P64463,UniRef:UniRef90_P64463
contig_1	Pyrodigal	gene	1551705	1553165	.	-	.	ID=GCA000010485_01522_gene;locus_tag=GCA000010485_01522;gene=ydfI
contig_1	Pyrodigal	CDS	1551705	1553165	.	-	0	ID=GCA000010485_01522;Name=putative oxidoreductase YdfI;locus_tag=GCA000010485_01522;product=putative oxidoreductase YdfI;Dbxref=GO:0016616,GO:0019594;gene=ydfI;Parent=GCA000010485_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000526712.1,SO:0001217,UniParc:UPI0001C22E16,UniRef:UniRef100_UPI0001C22E16,UniRef:UniRef50_P39160,UniRef:UniRef90_P77260;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1553254	1554621	.	-	.	ID=GCA000010485_01523_gene;locus_tag=GCA000010485_01523;gene=ydfJ
contig_1	Pyrodigal	CDS	1553254	1554621	.	-	0	ID=GCA000010485_01523;Name=MHS family MFS transporter YdfJ;locus_tag=GCA000010485_01523;product=MHS family MFS transporter YdfJ;Dbxref=GO:0005267,GO:0005886,GO:0015293;gene=ydfJ;Parent=GCA000010485_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000582800,COG:COG0477,COG:GEPR,KEGG:K08173,RefSeq:WP_000151247.1,SO:0001217,UniParc:UPI000209C60D,UniRef:UniRef100_A0A1U9TP71,UniRef:UniRef50_P77228,UniRef:UniRef90_P77228
contig_1	Pyrodigal	gene	1554679	1555698	.	-	.	ID=GCA000010485_01524_gene;locus_tag=GCA000010485_01524;gene=rspB
contig_1	Pyrodigal	CDS	1554679	1555698	.	-	0	ID=GCA000010485_01524;Name=Zn-dependent oxidoreductase;locus_tag=GCA000010485_01524;product=Zn-dependent oxidoreductase;Dbxref=GO:0008270,GO:0016491;gene=rspB;Parent=GCA000010485_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000836081.1,SO:0001217,UniParc:UPI0001C22E44,UniRef:UniRef100_A0A061KZR5,UniRef:UniRef50_P38105,UniRef:UniRef90_P38105;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	1555710	1556924	.	-	.	ID=GCA000010485_01525_gene;locus_tag=GCA000010485_01525;gene=rspA
contig_1	Pyrodigal	CDS	1555710	1556924	.	-	0	ID=GCA000010485_01525;Name=starvation-sensing protein RspA;locus_tag=GCA000010485_01525;product=starvation-sensing protein RspA;Dbxref=GO:0008927,GO:0016052;gene=rspA;Parent=GCA000010485_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295394,COG:COG4948,COG:MR,KEGG:K08323,RefSeq:WP_001296083.1,SO:0001217,UniParc:UPI0001C22E45,UniRef:UniRef100_A0A066SRL5,UniRef:UniRef50_C6D9S0,UniRef:UniRef90_D4E312;ec_number=4.2.1.8
contig_1	Pyrodigal	gene	1557130	1557456	.	-	.	ID=GCA000010485_01526_gene;locus_tag=GCA000010485_01526;gene=ynfA
contig_1	Pyrodigal	CDS	1557130	1557456	.	-	0	ID=GCA000010485_01526;Name=YnfA family protein;locus_tag=GCA000010485_01526;product=YnfA family protein;Dbxref=GO:0005886,GO:0016020;gene=ynfA;Parent=GCA000010485_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09771,RefSeq:WP_000598292.1,SO:0001217,UniParc:UPI000013BB26,UniRef:UniRef100_P76169,UniRef:UniRef50_P76169,UniRef:UniRef90_P76169
contig_1	Pyrodigal	gene	1557591	1557932	.	+	.	ID=GCA000010485_01527_gene;locus_tag=GCA000010485_01527;gene=ynfB
contig_1	Pyrodigal	CDS	1557591	1557932	.	+	0	ID=GCA000010485_01527;Name=DUF1283 domain-containing protein;locus_tag=GCA000010485_01527;product=DUF1283 domain-containing protein;Dbxref=GO:0009279;gene=ynfB;Parent=GCA000010485_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705204.1,SO:0001217,UniParc:UPI0001C22E46,UniRef:UniRef100_A0A066SZI7,UniRef:UniRef50_P76170,UniRef:UniRef90_P76170
contig_1	Pyrodigal	gene	1557967	1558527	.	+	.	ID=GCA000010485_01528_gene;locus_tag=GCA000010485_01528;gene=speG
contig_1	Pyrodigal	CDS	1557967	1558527	.	+	0	ID=GCA000010485_01528;Name=spermidine N1-acetyltransferase;locus_tag=GCA000010485_01528;product=spermidine N1-acetyltransferase;Dbxref=GO:0008080;gene=speG;Parent=GCA000010485_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001138584.1,SO:0001217,UniParc:UPI00000DEBC3,UniRef:UniRef100_A0A376PVX6,UniRef:UniRef50_P0A951,UniRef:UniRef90_B7LR99;ec_number=2.3.1.57
contig_1	Pyrodigal	gene	1558530	1559276	.	-	.	ID=GCA000010485_01529_gene;locus_tag=GCA000010485_01529;gene=ynfC
contig_1	Pyrodigal	CDS	1558530	1559276	.	-	0	ID=GCA000010485_01529;Name=YnfC family lipoprotein;locus_tag=GCA000010485_01529;product=YnfC family lipoprotein;Dbxref=GO:0005886;gene=ynfC;Parent=GCA000010485_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DBC912,UniRef:UniRef100_A0AA36P6K8,UniRef:UniRef50_Q8X799,UniRef:UniRef90_Q8X799
contig_1	Pyrodigal	gene	1559348	1559653	.	+	.	ID=GCA000010485_01530_gene;locus_tag=GCA000010485_01530
contig_1	Pyrodigal	CDS	1559348	1559653	.	+	0	ID=GCA000010485_01530;Name=DUF1161 domain-containing protein;locus_tag=GCA000010485_01530;product=DUF1161 domain-containing protein;Parent=GCA000010485_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296085.1,SO:0001217,UniParc:UPI0001E8A61E,UniRef:UniRef100_A0A066SRM0,UniRef:UniRef50_A0A0H2V8R2,UniRef:UniRef90_A0A0H2V8R2
contig_1	Pyrodigal	gene	1559852	1562278	.	+	.	ID=GCA000010485_01531_gene;locus_tag=GCA000010485_01531;gene=ynfE
contig_1	Pyrodigal	CDS	1559852	1562278	.	+	0	ID=GCA000010485_01531;Name=selenate/tellurate reductase subunit YnfE;locus_tag=GCA000010485_01531;product=selenate/tellurate reductase subunit YnfE;Dbxref=GO:0005886,GO:0009055,GO:0009061,GO:0009389,GO:0030151,GO:0030288,GO:0033797,GO:0043546,GO:0051539;gene=ynfE;Parent=GCA000010485_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07309,RefSeq:WP_000041660.1,SO:0001217,UniParc:UPI0001C22E48,UniRef:UniRef100_A0A066SVI8,UniRef:UniRef50_P77374,UniRef:UniRef90_P77374;ec_number=1.8.99.-
contig_1	Pyrodigal	gene	1562366	1563100	.	+	.	ID=GCA000010485_01532_gene;locus_tag=GCA000010485_01532
contig_1	Pyrodigal	CDS	1562366	1563100	.	+	0	ID=GCA000010485_01532;Name=Putative oxidoreductase major subunit;locus_tag=GCA000010485_01532;product=Putative oxidoreductase major subunit;Parent=GCA000010485_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376U936,UniRef:UniRef90_A0A377BJX4
contig_1	Pyrodigal	gene	1563097	1563834	.	+	.	ID=GCA000010485_01533_gene;locus_tag=GCA000010485_01533;gene=ynfF
contig_1	Pyrodigal	CDS	1563097	1563834	.	+	0	ID=GCA000010485_01533;Name=YnfF;locus_tag=GCA000010485_01533;product=YnfF;gene=ynfF;Parent=GCA000010485_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22E4A,UniRef:UniRef100_A0A192C7F8,UniRef:UniRef50_A0A485CQT5,UniRef:UniRef90_A0A192C7F8
contig_1	Pyrodigal	gene	1563919	1564536	.	+	.	ID=GCA000010485_01534_gene;locus_tag=GCA000010485_01534;gene=ynfG
contig_1	Pyrodigal	CDS	1563919	1564536	.	+	0	ID=GCA000010485_01534;Name=DMSO/selenate family reductase complex B subunit;locus_tag=GCA000010485_01534;product=DMSO/selenate family reductase complex B subunit;Dbxref=GO:0009061,GO:0046872,GO:0051539,GO:1990204;gene=ynfG;Parent=GCA000010485_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_000213028.1,SO:0001217,UniParc:UPI00000D0D9C,UniRef:UniRef100_P0AAJ1,UniRef:UniRef50_P18776,UniRef:UniRef90_P18776;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	1564538	1565392	.	+	.	ID=GCA000010485_01535_gene;locus_tag=GCA000010485_01535;gene=ynfH
contig_1	Pyrodigal	CDS	1564538	1565392	.	+	0	ID=GCA000010485_01535;Name=Anaerobic dimethyl sulfoxide reductase chain YnfH;locus_tag=GCA000010485_01535;product=Anaerobic dimethyl sulfoxide reductase chain YnfH;Dbxref=GO:0005886,GO:0009061,GO:0009389,GO:0009390,GO:0019645,GO:1990204;gene=ynfH;Parent=GCA000010485_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3302,KEGG:K07312,RefSeq:WP_000526467.1,SO:0001217,UniParc:UPI000187BB65,UniRef:UniRef100_A0A066SRM4,UniRef:UniRef50_P76173,UniRef:UniRef90_P76173
contig_1	Pyrodigal	gene	1565435	1566049	.	+	.	ID=GCA000010485_01536_gene;locus_tag=GCA000010485_01536;gene=dmsD
contig_1	Pyrodigal	CDS	1565435	1566049	.	+	0	ID=GCA000010485_01536;Name=Tat proofreading chaperone DmsD;locus_tag=GCA000010485_01536;product=Tat proofreading chaperone DmsD;Dbxref=GO:0005048,GO:0061077;gene=dmsD;Parent=GCA000010485_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000148693.1,SO:0001217,UniParc:UPI0001C22E4B,UniRef:UniRef100_A0A061KZN1,UniRef:UniRef50_P69853,UniRef:UniRef90_P69853
contig_1	Pyrodigal	gene	1566246	1567502	.	+	.	ID=GCA000010485_01537_gene;locus_tag=GCA000010485_01537;gene=clcB
contig_1	Pyrodigal	CDS	1566246	1567502	.	+	0	ID=GCA000010485_01537;Name=voltage-gated ClC-type chloride channel ClcB;locus_tag=GCA000010485_01537;product=voltage-gated ClC-type chloride channel ClcB;Dbxref=GO:0005247,GO:0005886,GO:0006821,GO:0010447,GO:0016020,GO:0034707;gene=clcB;Parent=GCA000010485_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P76175,UniRef:UniRef90_P76175
contig_1	Pyrodigal	gene	1567455	1568150	.	-	.	ID=GCA000010485_01538_gene;locus_tag=GCA000010485_01538;gene=bioD
contig_1	Pyrodigal	CDS	1567455	1568150	.	-	0	ID=GCA000010485_01538;Name=dethiobiotin synthase;locus_tag=GCA000010485_01538;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0005829,GO:0009102;gene=bioD;Parent=GCA000010485_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_000919226.1,SO:0001217,UniParc:UPI0000DACE54,UniRef:UniRef100_E2QMF6,UniRef:UniRef50_P0A6E9,UniRef:UniRef90_P0A6E9;ec_number=6.3.3.3
contig_1	Pyrodigal	gene	1568275	1569495	.	-	.	ID=GCA000010485_01539_gene;locus_tag=GCA000010485_01539;gene=mlc
contig_1	Pyrodigal	CDS	1568275	1569495	.	-	0	ID=GCA000010485_01539;Name=DNA-binding transcriptional repressor Mlc;locus_tag=GCA000010485_01539;product=DNA-binding transcriptional repressor Mlc;Dbxref=GO:0003677,GO:0005737,GO:0006351,GO:0006355,GO:0016020,GO:0042802,GO:0046872;gene=mlc;Parent=GCA000010485_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000225262,COG:COG1940,COG:GK,KEGG:K15545,RefSeq:WP_000225276.1,SO:0001217,UniParc:UPI00000D0AA3,UniRef:UniRef100_C3T9C7,UniRef:UniRef50_P50456,UniRef:UniRef90_P50456
contig_1	Pyrodigal	gene	1569630	1570523	.	-	.	ID=GCA000010485_01540_gene;locus_tag=GCA000010485_01540;gene=ynfL
contig_1	Pyrodigal	CDS	1569630	1570523	.	-	0	ID=GCA000010485_01540;Name=putative HTH-type transcriptional regulator YnfL;locus_tag=GCA000010485_01540;product=putative HTH-type transcriptional regulator YnfL;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0032993;gene=ynfL;Parent=GCA000010485_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001019561.1,SO:0001217,UniParc:UPI00005EFD18,UniRef:UniRef100_A0A067HGR4,UniRef:UniRef50_P77559,UniRef:UniRef90_P77559
contig_1	Pyrodigal	gene	1570630	1571883	.	+	.	ID=GCA000010485_01541_gene;locus_tag=GCA000010485_01541;gene=ynfM
contig_1	Pyrodigal	CDS	1570630	1571883	.	+	0	ID=GCA000010485_01541;Name=Inner membrane transport protein YnfM;locus_tag=GCA000010485_01541;product=Inner membrane transport protein YnfM;Dbxref=GO:0005886,GO:0022857;gene=ynfM;Parent=GCA000010485_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091813.1,SO:0001217,UniParc:UPI0001C22E4D,UniRef:UniRef100_A0A061YNZ3,UniRef:UniRef50_P43531,UniRef:UniRef90_P43531
contig_1	Pyrodigal	gene	1572307	1572615	.	+	.	ID=GCA000010485_01542_gene;locus_tag=GCA000010485_01542;gene=asr
contig_1	Pyrodigal	CDS	1572307	1572615	.	+	0	ID=GCA000010485_01542;Name=acid resistance repetitive basic protein Asr;locus_tag=GCA000010485_01542;product=acid resistance repetitive basic protein Asr;Dbxref=GO:0042597;gene=asr;Parent=GCA000010485_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:BAA15331.2,RefSeq:WP_001362115.1,SO:0001217,UniParc:UPI00001A3AB3,UniRef:UniRef100_B7M9V0,UniRef:UniRef50_P36560,UniRef:UniRef90_P36560
contig_1	Bakta	gene	1572708	1572791	.	+	.	ID=GCA000010485_01543_gene;locus_tag=GCA000010485_01543;inference=ab initio prediction:Bakta;gene=ydgU
contig_1	Bakta	CDS	1572708	1572791	.	+	0	ID=GCA000010485_01543;Name=putative protein YdgU;locus_tag=GCA000010485_01543;product=putative protein YdgU;gene=ydgU;Parent=GCA000010485_01543_gene;Note=RefSeq:WP_000233090.1,SO:0001217,UniParc:UPI00016A062F,UniRef:UniRef100_A0A024L397,UniRef:UniRef50_A5A617,UniRef:UniRef90_A5A617
contig_1	Pyrodigal	gene	1572891	1573712	.	+	.	ID=GCA000010485_01544_gene;locus_tag=GCA000010485_01544;gene=ydgD
contig_1	Pyrodigal	CDS	1572891	1573712	.	+	0	ID=GCA000010485_01544;Name=putative serine protease YdgD;locus_tag=GCA000010485_01544;product=putative serine protease YdgD;Dbxref=GO:0004252,GO:0006508;gene=ydgD;Parent=GCA000010485_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3591,COG:O,RefSeq:WP_001260849.1,SO:0001217,UniParc:UPI00000E4A05,UniRef:UniRef100_E2QMG1,UniRef:UniRef50_P76176,UniRef:UniRef90_P76176;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1573751	1574080	.	-	.	ID=GCA000010485_01545_gene;locus_tag=GCA000010485_01545;gene=mdtI
contig_1	Pyrodigal	CDS	1573751	1574080	.	-	0	ID=GCA000010485_01545;Name=multidrug/spermidine efflux SMR transporter subunit MdtI;locus_tag=GCA000010485_01545;product=multidrug/spermidine efflux SMR transporter subunit MdtI;Dbxref=GO:0005886,GO:0015199,GO:0015220,GO:0015297,GO:0015606,GO:0031460;gene=mdtI;Parent=GCA000010485_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000046661,COG:COG2076,COG:V,KEGG:K11742,RefSeq:WP_000046661.1,SO:0001217,UniParc:UPI000013A98B,UniRef:UniRef100_P69210,UniRef:UniRef50_P69210,UniRef:UniRef90_P69210
contig_1	Pyrodigal	gene	1574067	1574432	.	-	.	ID=GCA000010485_01546_gene;locus_tag=GCA000010485_01546;gene=mdtJ
contig_1	Pyrodigal	CDS	1574067	1574432	.	-	0	ID=GCA000010485_01546;Name=multidrug/spermidine efflux SMR transporter subunit MdtJ;locus_tag=GCA000010485_01546;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;Dbxref=GO:0005886,GO:0015199,GO:0015220,GO:0015297,GO:0015606,GO:0015848,GO:0016020,GO:0031460;gene=mdtJ;Parent=GCA000010485_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2076,COG:V,KEGG:K11743,RefSeq:WP_000276149.1,SO:0001217,UniParc:UPI000013A98D,UniRef:UniRef100_P69212,UniRef:UniRef50_P69212,UniRef:UniRef90_P69212
contig_1	Pyrodigal	gene	1574844	1575878	.	+	.	ID=GCA000010485_01547_gene;locus_tag=GCA000010485_01547;gene=tqsA
contig_1	Pyrodigal	CDS	1574844	1575878	.	+	0	ID=GCA000010485_01547;Name=AI-2 transporter TqsA;locus_tag=GCA000010485_01547;product=AI-2 transporter TqsA;gene=tqsA;Parent=GCA000010485_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001118241,RefSeq:WP_001118215.1,SO:0001217,UniParc:UPI00000DEBCF,UniRef:UniRef100_A0A023KNL5,UniRef:UniRef90_P0AFS5
contig_1	Pyrodigal	gene	1575903	1577291	.	-	.	ID=GCA000010485_01548_gene;locus_tag=GCA000010485_01548;gene=pntB
contig_1	Pyrodigal	CDS	1575903	1577291	.	-	0	ID=GCA000010485_01548;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;locus_tag=GCA000010485_01548;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;Dbxref=GO:0005886,GO:0006740,GO:0008750,GO:0016020,GO:0050661,GO:0120029;gene=pntB;Parent=GCA000010485_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1282,KEGG:K00325,RefSeq:WP_000014031.1,SO:0001217,UniParc:UPI00005EFD14,UniRef:UniRef100_A0A067HS64,UniRef:UniRef50_P0AB67,UniRef:UniRef90_P0AB67;ec_number=7.1.1.1
contig_1	Pyrodigal	gene	1577302	1578834	.	-	.	ID=GCA000010485_01549_gene;locus_tag=GCA000010485_01549;gene=pntA
contig_1	Pyrodigal	CDS	1577302	1578834	.	-	0	ID=GCA000010485_01549;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;locus_tag=GCA000010485_01549;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;Dbxref=GO:0005886,GO:0006740,GO:0008750,GO:0016491,GO:0046983,GO:0050661,GO:0120029,GO:1902600;gene=pntA;Parent=GCA000010485_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3288,RefSeq:WP_001296090.1,SO:0001217,UniParc:UPI0001C22E4E,UniRef:UniRef100_A0A061YJS8,UniRef:UniRef50_P07001,UniRef:UniRef90_P07001;ec_number=7.1.1.1
contig_1	Pyrodigal	gene	1579358	1580302	.	+	.	ID=GCA000010485_01550_gene;locus_tag=GCA000010485_01550;gene=ydgH
contig_1	Pyrodigal	CDS	1579358	1580302	.	+	0	ID=GCA000010485_01550;Name=DUF1471 domain-containing protein;locus_tag=GCA000010485_01550;product=DUF1471 domain-containing protein;gene=ydgH;Parent=GCA000010485_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769322.1,SO:0001217,UniParc:UPI00000D0AAF,UniRef:UniRef100_C3T982,UniRef:UniRef50_P76177,UniRef:UniRef90_P76177
contig_1	Pyrodigal	gene	1580488	1581870	.	+	.	ID=GCA000010485_01551_gene;locus_tag=GCA000010485_01551;gene=ydgI
contig_1	Pyrodigal	CDS	1580488	1581870	.	+	0	ID=GCA000010485_01551;Name=Putative arginine/ornithine antiporter;locus_tag=GCA000010485_01551;product=Putative arginine/ornithine antiporter;Dbxref=GO:0005886,GO:0006865,GO:0015297;gene=ydgI;Parent=GCA000010485_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03758,RefSeq:WP_000412379.1,SO:0001217,UniParc:UPI0000125DAB,UniRef:UniRef100_P0AAE5,UniRef:UniRef50_P0AAE5,UniRef:UniRef90_P0AAE5
contig_1	Pyrodigal	gene	1581907	1582629	.	+	.	ID=GCA000010485_01552_gene;locus_tag=GCA000010485_01552;gene=folM
contig_1	Pyrodigal	CDS	1581907	1582629	.	+	0	ID=GCA000010485_01552;Name=dihydromonapterin reductase;locus_tag=GCA000010485_01552;product=dihydromonapterin reductase;Dbxref=GO:0004146,GO:0006730,GO:0016491;gene=folM;Parent=GCA000010485_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000520812.1,SO:0001217,UniParc:UPI00000DEBD1,UniRef:UniRef100_Q8FHB1,UniRef:UniRef50_P0AFS3,UniRef:UniRef90_P0AFS3;ec_number=1.5.1.50
contig_1	Pyrodigal	gene	1582626	1582961	.	-	.	ID=GCA000010485_01553_gene;locus_tag=GCA000010485_01553;gene=ydgC
contig_1	Pyrodigal	CDS	1582626	1582961	.	-	0	ID=GCA000010485_01553;Name=Inner membrane protein YdgC;locus_tag=GCA000010485_01553;product=Inner membrane protein YdgC;Dbxref=GO:0005886;gene=ydgC;Parent=GCA000010485_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3136,COG:S,KEGG:K02442,RefSeq:WP_000524861.1,SO:0001217,UniParc:UPI00000DEBD2,UniRef:UniRef100_E2QMH0,UniRef:UniRef50_P0ACX0,UniRef:UniRef90_P0ACX0
contig_1	Pyrodigal	gene	1583090	1583809	.	+	.	ID=GCA000010485_01554_gene;locus_tag=GCA000010485_01554;gene=rstA
contig_1	Pyrodigal	CDS	1583090	1583809	.	+	0	ID=GCA000010485_01554;Name=two-component system response regulator RstA;locus_tag=GCA000010485_01554;product=two-component system response regulator RstA;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0003677,GO:0005829,GO:0006355,GO:0032993;gene=rstA;Parent=GCA000010485_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,KEGG:K07661,RefSeq:WP_001296091.1,SO:0001217,UniParc:UPI0001C22E4F,UniRef:UniRef100_A0A061KXN0,UniRef:UniRef50_P52108,UniRef:UniRef90_P52108
contig_1	Pyrodigal	gene	1583813	1585114	.	+	.	ID=GCA000010485_01555_gene;locus_tag=GCA000010485_01555;gene=rstB
contig_1	Pyrodigal	CDS	1583813	1585114	.	+	0	ID=GCA000010485_01555;Name=two-component system sensor histidine kinase RstB;locus_tag=GCA000010485_01555;product=two-component system sensor histidine kinase RstB;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0016310;gene=rstB;Parent=GCA000010485_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,KEGG:K07639,RefSeq:WP_000732519.1,SO:0001217,UniParc:UPI00000DEBD3,UniRef:UniRef100_A0A061KVS0,UniRef:UniRef50_P18392,UniRef:UniRef90_P18392;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1585190	1586119	.	+	.	ID=GCA000010485_01556_gene;locus_tag=GCA000010485_01556;gene=tus
contig_1	Pyrodigal	CDS	1585190	1586119	.	+	0	ID=GCA000010485_01556;Name=DNA replication terminus site-binding protein;locus_tag=GCA000010485_01556;product=DNA replication terminus site-binding protein;Dbxref=GO:0003677,GO:0005737,GO:0006274;gene=tus;Parent=GCA000010485_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531721.1,SO:0001217,UniParc:UPI0001C22E50,UniRef:UniRef100_A0A061KUX0,UniRef:UniRef50_P16525,UniRef:UniRef90_Q8FHA8
contig_1	Pyrodigal	gene	1586116	1587519	.	-	.	ID=GCA000010485_01557_gene;locus_tag=GCA000010485_01557;gene=fumC
contig_1	Pyrodigal	CDS	1586116	1587519	.	-	0	ID=GCA000010485_01557;Name=class II fumarate hydratase;locus_tag=GCA000010485_01557;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA000010485_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_001099099.1,SO:0001217,UniParc:UPI00000DEBD5,UniRef:UniRef100_Q8FHA7,UniRef:UniRef50_P05042,UniRef:UniRef90_P05042;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1587662	1589308	.	-	.	ID=GCA000010485_01558_gene;locus_tag=GCA000010485_01558;gene=fumB
contig_1	Pyrodigal	CDS	1587662	1589308	.	-	0	ID=GCA000010485_01558;Name=class I fumarate hydratase;locus_tag=GCA000010485_01558;product=class I fumarate hydratase;Dbxref=GO:0004333,GO:0005829,GO:0006099,GO:0042802,GO:0042803,GO:0046872,GO:0050163,GO:0051539;gene=fumB;Parent=GCA000010485_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066639,BlastRules:WP_000066707,COG:C,COG:COG1951,KEGG:K01676,RefSeq:WP_000066622.1,SO:0001217,UniParc:UPI0001C22E51,UniRef:UniRef100_A0A066SZL6,UniRef:UniRef50_P0AC33,UniRef:UniRef90_P0AC33;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1589507	1590682	.	+	.	ID=GCA000010485_01559_gene;locus_tag=GCA000010485_01559;gene=manA
contig_1	Pyrodigal	CDS	1589507	1590682	.	+	0	ID=GCA000010485_01559;Name=mannose-6-phosphate isomerase;locus_tag=GCA000010485_01559;product=mannose-6-phosphate isomerase;Dbxref=GO:0004476,GO:0005829,GO:0005975,GO:0008270,GO:0009298;gene=manA;Parent=GCA000010485_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001170641.1,SO:0001217,UniParc:UPI0001C22E52,UniRef:UniRef100_A0A066T0E2,UniRef:UniRef50_P00946,UniRef:UniRef90_P00946;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	1590783	1592291	.	+	.	ID=GCA000010485_01560_gene;locus_tag=GCA000010485_01560;gene=ydgA
contig_1	Pyrodigal	CDS	1590783	1592291	.	+	0	ID=GCA000010485_01560;Name=Protein YdgA;locus_tag=GCA000010485_01560;product=Protein YdgA;Dbxref=GO:0005886,GO:0042802,GO:0042803,GO:0071978;gene=ydgA;Parent=GCA000010485_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5339,COG:S,RefSeq:WP_001043375.1,SO:0001217,UniParc:UPI0001C22E7A,UniRef:UniRef100_A0A061YNA7,UniRef:UniRef50_P77804,UniRef:UniRef90_P77804
contig_1	Pyrodigal	gene	1592336	1593601	.	-	.	ID=GCA000010485_01561_gene;locus_tag=GCA000010485_01561;gene=uidC
contig_1	Pyrodigal	CDS	1592336	1593601	.	-	0	ID=GCA000010485_01561;Name=glucuronide uptake porin UidC;locus_tag=GCA000010485_01561;product=glucuronide uptake porin UidC;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0046930;gene=uidC;Parent=GCA000010485_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16140,RefSeq:WP_001227058.1,SO:0001217,UniParc:UPI0001C22E7B,UniRef:UniRef100_A0A3L3HAV7,UniRef:UniRef50_Q47706,UniRef:UniRef90_Q47706
contig_1	Pyrodigal	gene	1593640	1595013	.	-	.	ID=GCA000010485_01562_gene;locus_tag=GCA000010485_01562;gene=uidB
contig_1	Pyrodigal	CDS	1593640	1595013	.	-	0	ID=GCA000010485_01562;Name=glucuronide transporter;locus_tag=GCA000010485_01562;product=glucuronide transporter;Dbxref=GO:0005886,GO:0006810,GO:0006814,GO:0008643,GO:0015293,GO:0016020,GO:0022857,GO:0055085;gene=uidB;Parent=GCA000010485_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2211,COG:G,RefSeq:WP_001075832.1,SO:0001217,UniParc:UPI0001C22E7C,UniRef:UniRef100_A0A641E6S0,UniRef:UniRef50_P0CE45,UniRef:UniRef90_P0CE45
contig_1	Pyrodigal	gene	1595010	1596821	.	-	.	ID=GCA000010485_01563_gene;locus_tag=GCA000010485_01563;gene=uidA
contig_1	Pyrodigal	CDS	1595010	1596821	.	-	0	ID=GCA000010485_01563;Name=beta-glucuronidase;locus_tag=GCA000010485_01563;product=beta-glucuronidase;Dbxref=GO:0004553,GO:0004566,GO:0005829,GO:0005975,GO:0030246,GO:0032991,GO:0042802;gene=uidA;Parent=GCA000010485_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01195,RefSeq:WP_000945867.1,SO:0001217,UniParc:UPI0001C22E7D,UniRef:UniRef100_A0A066SS01,UniRef:UniRef50_P05804,UniRef:UniRef90_P05804;ec_number=3.2.1.31
contig_1	Pyrodigal	gene	1597211	1597789	.	-	.	ID=GCA000010485_01564_gene;locus_tag=GCA000010485_01564;gene=uidR
contig_1	Pyrodigal	CDS	1597211	1597789	.	-	0	ID=GCA000010485_01564;Name=DNA-binding transcriptional regulator UidR;locus_tag=GCA000010485_01564;product=DNA-binding transcriptional regulator UidR;Dbxref=GO:0000976,GO:0003700;gene=uidR;Parent=GCA000010485_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000969092,COG:COG1309,COG:K,RefSeq:WP_001360124.1,SO:0001217,UniParc:UPI000170F01D,UniRef:UniRef100_P0ACT6,UniRef:UniRef50_P0ACT6,UniRef:UniRef90_P0ACT6
contig_1	Pyrodigal	gene	1598030	1598797	.	-	.	ID=GCA000010485_01565_gene;locus_tag=GCA000010485_01565;gene=hdhA
contig_1	Pyrodigal	CDS	1598030	1598797	.	-	0	ID=GCA000010485_01565;Name=7-alpha-hydroxysteroid dehydrogenase;locus_tag=GCA000010485_01565;product=7-alpha-hydroxysteroid dehydrogenase;Dbxref=GO:0005829,GO:0008709,GO:0016042,GO:0030573,GO:0032991,GO:0042802,GO:0051287,GO:0106281;gene=hdhA;Parent=GCA000010485_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000483358.1,SO:0001217,UniParc:UPI0001C22E7E,UniRef:UniRef100_A0A3L0U5A8,UniRef:UniRef50_P0AET8,UniRef:UniRef90_P0AET8;ec_number=1.1.1.159
contig_1	Pyrodigal	gene	1598909	1599937	.	-	.	ID=GCA000010485_01566_gene;locus_tag=GCA000010485_01566;gene=malI
contig_1	Pyrodigal	CDS	1598909	1599937	.	-	0	ID=GCA000010485_01566;Name=mal regulon transcriptional regulator MalI;locus_tag=GCA000010485_01566;product=mal regulon transcriptional regulator MalI;Dbxref=GO:0000976,GO:0001217,GO:0003700,GO:0006355,GO:0032993,GO:0045892;gene=malI;Parent=GCA000010485_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000179510,COG:COG1609,COG:K,RefSeq:WP_000179502.1,SO:0001217,UniParc:UPI0001C22E7F,UniRef:UniRef100_A0A061YM92,UniRef:UniRef50_P18811,UniRef:UniRef90_P18811
contig_1	Pyrodigal	gene	1600112	1601704	.	+	.	ID=GCA000010485_01567_gene;locus_tag=GCA000010485_01567;gene=malX
contig_1	Pyrodigal	CDS	1600112	1601704	.	+	0	ID=GCA000010485_01567;Name=PTS maltose transporter subunit IICB;locus_tag=GCA000010485_01567;product=PTS maltose transporter subunit IICB;Dbxref=GO:0005363,GO:0005886,GO:0008982,GO:0009401,GO:0009758,GO:0015768,GO:0016301,GO:0046323,GO:0055056,GO:0090564,GO:1904659;gene=malX;Parent=GCA000010485_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000125583,COG:COG1264,COG:G,RefSeq:WP_000125586.1,SO:0001217,UniParc:UPI0001C22E80,UniRef:UniRef100_A0A066T0F0,UniRef:UniRef50_P19642,UniRef:UniRef90_P19642
contig_1	Pyrodigal	gene	1601714	1602886	.	+	.	ID=GCA000010485_01568_gene;locus_tag=GCA000010485_01568;gene=malY
contig_1	Pyrodigal	CDS	1601714	1602886	.	+	0	ID=GCA000010485_01568;Name=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;locus_tag=GCA000010485_01568;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;Dbxref=GO:0009086,GO:0030170,GO:0042803,GO:0047804,GO:0080146,GO:0140297;gene=malY;Parent=GCA000010485_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000459379,COG:COG1168,COG:ER,RefSeq:WP_000459358.1,SO:0001217,UniParc:UPI000188748B,UniRef:UniRef100_E2QMI5,UniRef:UniRef50_P23256,UniRef:UniRef90_P23256;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	1602990	1603991	.	+	.	ID=GCA000010485_01569_gene;locus_tag=GCA000010485_01569;gene=add
contig_1	Pyrodigal	CDS	1602990	1603991	.	+	0	ID=GCA000010485_01569;Name=adenosine deaminase;locus_tag=GCA000010485_01569;product=adenosine deaminase;Dbxref=GO:0004000,GO:0005829,GO:0006154,GO:0008270,GO:0009117,GO:0009168,GO:0043103,GO:0046103,GO:0046936;gene=add;Parent=GCA000010485_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1816,COG:F,RefSeq:WP_000567529.1,SO:0001217,UniParc:UPI0001C22E81,UniRef:UniRef100_UPI0001C22E81,UniRef:UniRef50_P22333,UniRef:UniRef90_P22333;ec_number=3.5.4.4
contig_1	Pyrodigal	gene	1604027	1605067	.	-	.	ID=GCA000010485_01570_gene;locus_tag=GCA000010485_01570;gene=ydgJ
contig_1	Pyrodigal	CDS	1604027	1605067	.	-	0	ID=GCA000010485_01570;Name=putative oxidoreductase YdgJ;locus_tag=GCA000010485_01570;product=putative oxidoreductase YdgJ;Dbxref=GO:0000166,GO:0005829,GO:0017000,GO:0102497;gene=ydgJ;Parent=GCA000010485_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_001282552.1,SO:0001217,UniParc:UPI0001C22E82,UniRef:UniRef100_A0A066SVM5,UniRef:UniRef50_P77376,UniRef:UniRef90_P77376;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1605707	1605922	.	+	.	ID=GCA000010485_01571_gene;locus_tag=GCA000010485_01571;gene=ydgT
contig_1	Pyrodigal	CDS	1605707	1605922	.	+	0	ID=GCA000010485_01571;Name=transcription modulator YdgT;locus_tag=GCA000010485_01571;product=transcription modulator YdgT;Dbxref=GO:0003677;gene=ydgT;Parent=GCA000010485_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05839,RefSeq:WP_000217950.1,SO:0001217,UniParc:UPI000013A993,UniRef:UniRef100_P64467,UniRef:UniRef50_P64467,UniRef:UniRef90_P64467
contig_1	Pyrodigal	gene	1606008	1606448	.	+	.	ID=GCA000010485_01572_gene;locus_tag=GCA000010485_01572;gene=ydgK
contig_1	Pyrodigal	CDS	1606008	1606448	.	+	0	ID=GCA000010485_01572;Name=Inner membrane protein YdgK;locus_tag=GCA000010485_01572;product=Inner membrane protein YdgK;Dbxref=GO:0005886;gene=ydgK;Parent=GCA000010485_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214176.1,SO:0001217,UniParc:UPI00005F032B,UniRef:UniRef100_E2QMJ0,UniRef:UniRef50_P76180,UniRef:UniRef90_P76180
contig_1	Pyrodigal	gene	1606525	1607106	.	+	.	ID=GCA000010485_01573_gene;locus_tag=GCA000010485_01573;gene=rsxA
contig_1	Pyrodigal	CDS	1606525	1607106	.	+	0	ID=GCA000010485_01573;Name=electron transport complex subunit RsxA;locus_tag=GCA000010485_01573;product=electron transport complex subunit RsxA;Dbxref=GO:0005886,GO:0016020,GO:0022900;gene=rsxA;Parent=GCA000010485_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4657,KEGG:K03617,RefSeq:WP_000133193.1,SO:0001217,UniParc:UPI0000047C7B,UniRef:UniRef100_P0A766,UniRef:UniRef50_P0A766,UniRef:UniRef90_P0A766;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1607106	1607684	.	+	.	ID=GCA000010485_01574_gene;locus_tag=GCA000010485_01574;gene=rsxB
contig_1	Pyrodigal	CDS	1607106	1607684	.	+	0	ID=GCA000010485_01574;Name=electron transport complex subunit RsxB;locus_tag=GCA000010485_01574;product=electron transport complex subunit RsxB;Dbxref=GO:0009055,GO:0022900,GO:0046872,GO:0051536,GO:0051539,GO:0098797,GO:1990204;gene=rsxB;Parent=GCA000010485_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2878,RefSeq:WP_000991797.1,SO:0001217,UniParc:UPI00018874C1,UniRef:UniRef100_B7MV10,UniRef:UniRef50_P77223,UniRef:UniRef90_P77223;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1607677	1610097	.	+	.	ID=GCA000010485_01575_gene;locus_tag=GCA000010485_01575;gene=rsxC
contig_1	Pyrodigal	CDS	1607677	1610097	.	+	0	ID=GCA000010485_01575;Name=electron transport complex subunit RsxC;locus_tag=GCA000010485_01575;product=electron transport complex subunit RsxC;Dbxref=GO:0005886,GO:0009055,GO:0016020,GO:0022900,GO:0046872,GO:0051539;gene=rsxC;Parent=GCA000010485_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4656,RefSeq:WP_000915728.1,SO:0001217,UniParc:UPI0001C22E83,UniRef:UniRef100_A0A061KXK5,UniRef:UniRef50_A7MMK9,UniRef:UniRef90_Q32FE4;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1610098	1611156	.	+	.	ID=GCA000010485_01576_gene;locus_tag=GCA000010485_01576;gene=rsxD
contig_1	Pyrodigal	CDS	1610098	1611156	.	+	0	ID=GCA000010485_01576;Name=electron transport complex subunit RsxD;locus_tag=GCA000010485_01576;product=electron transport complex subunit RsxD;Dbxref=GO:0005886,GO:0016020,GO:0022900,GO:0055085;gene=rsxD;Parent=GCA000010485_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4658,RefSeq:WP_000231965.1,SO:0001217,UniParc:UPI0001C22E84,UniRef:UniRef100_A0A066T0F6,UniRef:UniRef50_P76182,UniRef:UniRef90_P76182;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1611160	1611780	.	+	.	ID=GCA000010485_01577_gene;locus_tag=GCA000010485_01577;gene=rsxG
contig_1	Pyrodigal	CDS	1611160	1611780	.	+	0	ID=GCA000010485_01577;Name=electron transport complex subunit RsxG;locus_tag=GCA000010485_01577;product=electron transport complex subunit RsxG;Dbxref=GO:0005886,GO:0009055,GO:0009279,GO:0010181,GO:0016020,GO:0016651,GO:0022900,GO:0098797,GO:1990204;gene=rsxG;Parent=GCA000010485_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4659,RefSeq:WP_000920791.1,SO:0001217,UniParc:UPI00000DEBE3,UniRef:UniRef100_A0A061YFY3,UniRef:UniRef50_P77285,UniRef:UniRef90_P77285;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1611784	1612479	.	+	.	ID=GCA000010485_01578_gene;locus_tag=GCA000010485_01578;gene=rsxE
contig_1	Pyrodigal	CDS	1611784	1612479	.	+	0	ID=GCA000010485_01578;Name=electron transport complex subunit RsxE;locus_tag=GCA000010485_01578;product=electron transport complex subunit RsxE;Dbxref=GO:0005886,GO:0022900;gene=rsxE;Parent=GCA000010485_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001289652,COG:C,COG:COG4660,RefSeq:WP_001289646.1,SO:0001217,UniParc:UPI00005EFB20,UniRef:UniRef100_B7URX3,UniRef:UniRef50_P77179,UniRef:UniRef90_P77179;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1612479	1613114	.	+	.	ID=GCA000010485_01579_gene;locus_tag=GCA000010485_01579;gene=nth
contig_1	Pyrodigal	CDS	1612479	1613114	.	+	0	ID=GCA000010485_01579;Name=endonuclease III;locus_tag=GCA000010485_01579;product=endonuclease III;Dbxref=GO:0003677,GO:0003906,GO:0006284,GO:0006285,GO:0019104,GO:0046872,GO:0051539,GO:0140078;gene=nth;Parent=GCA000010485_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_001030342.1,SO:0001217,UniParc:UPI0001C22E85,UniRef:UniRef100_A0A066SVN5,UniRef:UniRef50_P0AB83,UniRef:UniRef90_P0AB83;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1613725	1615227	.	+	.	ID=GCA000010485_01580_gene;locus_tag=GCA000010485_01580;gene=dtpA
contig_1	Pyrodigal	CDS	1613725	1615227	.	+	0	ID=GCA000010485_01580;Name=dipeptide/tripeptide permease DtpA;locus_tag=GCA000010485_01580;product=dipeptide/tripeptide permease DtpA;Dbxref=GO:0005886,GO:0015031,GO:0015333,GO:0015833,GO:0016020,GO:0035442,GO:0035443,GO:0042937,GO:0055085,GO:0071916,GO:1904680;gene=dtpA;Parent=GCA000010485_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3104,COG:E,RefSeq:WP_000100937.1,SO:0001217,UniParc:UPI00000DEBE5,UniRef:UniRef100_Q8FH91,UniRef:UniRef50_P77304,UniRef:UniRef90_P77304
contig_1	Pyrodigal	gene	1615333	1615938	.	+	.	ID=GCA000010485_01581_gene;locus_tag=GCA000010485_01581;gene=gstA
contig_1	Pyrodigal	CDS	1615333	1615938	.	+	0	ID=GCA000010485_01581;Name=glutathione transferase GstA;locus_tag=GCA000010485_01581;product=glutathione transferase GstA;Dbxref=GO:0004364,GO:0005515,GO:0005737,GO:0006749,GO:0042542,GO:0042803;gene=gstA;Parent=GCA000010485_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_000765749.1,SO:0001217,UniParc:UPI0000110321,UniRef:UniRef100_P0A9D2,UniRef:UniRef50_P0A9D2,UniRef:UniRef90_P0A9D2;ec_number=2.5.1.18
contig_1	Pyrodigal	gene	1615982	1616842	.	-	.	ID=GCA000010485_01582_gene;locus_tag=GCA000010485_01582;gene=pdxY
contig_1	Pyrodigal	CDS	1615982	1616842	.	-	0	ID=GCA000010485_01582;Name=pyridoxal kinase PdxY;locus_tag=GCA000010485_01582;product=pyridoxal kinase PdxY;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0008478,GO:0009443;gene=pdxY;Parent=GCA000010485_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00868,RefSeq:WP_001296097.1,SO:0001217,UniParc:UPI0000DACE5C,UniRef:UniRef100_Q0THJ1,UniRef:UniRef50_Q39I40,UniRef:UniRef90_Q0THJ1;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	1616904	1618178	.	-	.	ID=GCA000010485_01583_gene;locus_tag=GCA000010485_01583;gene=tyrS
contig_1	Pyrodigal	CDS	1616904	1618178	.	-	0	ID=GCA000010485_01583;Name=tyrosine--tRNA ligase;locus_tag=GCA000010485_01583;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437;gene=tyrS;Parent=GCA000010485_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_001295400.1,SO:0001217,UniParc:UPI0000165472,UniRef:UniRef100_P0AGJ9,UniRef:UniRef50_P0AGJ9,UniRef:UniRef90_P0AGJ9;ec_number=6.1.1.1
contig_1	Pyrodigal	gene	1618307	1618963	.	-	.	ID=GCA000010485_01584_gene;locus_tag=GCA000010485_01584;gene=pdxH
contig_1	Pyrodigal	CDS	1618307	1618963	.	-	0	ID=GCA000010485_01584;Name=pyridoxamine 5'-phosphate oxidase;locus_tag=GCA000010485_01584;product=pyridoxamine 5'-phosphate oxidase;Dbxref=GO:0004733,GO:0008615,GO:0010181;gene=pdxH;Parent=GCA000010485_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0259,COG:H,RefSeq:WP_001282319.1,SO:0001217,UniParc:UPI000011303F,UniRef:UniRef100_P0AFI7,UniRef:UniRef50_P0AFI7,UniRef:UniRef90_P0AFI7;ec_number=1.4.3.5
contig_1	Pyrodigal	gene	1619022	1619345	.	-	.	ID=GCA000010485_01585_gene;locus_tag=GCA000010485_01585;gene=mliC
contig_1	Pyrodigal	CDS	1619022	1619345	.	-	0	ID=GCA000010485_01585;Name=C-type lysozyme inhibitor;locus_tag=GCA000010485_01585;product=C-type lysozyme inhibitor;Dbxref=GO:0009279,GO:0060241;gene=mliC;Parent=GCA000010485_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3895,COG:M,RefSeq:WP_000734948.1,SO:0001217,UniParc:UPI000187BBD3,UniRef:UniRef100_A0A066SZP2,UniRef:UniRef50_P28224,UniRef:UniRef90_P28224
contig_1	Pyrodigal	gene	1619449	1620558	.	-	.	ID=GCA000010485_01586_gene;locus_tag=GCA000010485_01586;gene=anmK
contig_1	Pyrodigal	CDS	1619449	1620558	.	-	0	ID=GCA000010485_01586;Name=anhydro-N-acetylmuramic acid kinase;locus_tag=GCA000010485_01586;product=anhydro-N-acetylmuramic acid kinase;Dbxref=GO:0005524,GO:0006040,GO:0009254,GO:0016301,GO:0016773,GO:0097175;gene=anmK;Parent=GCA000010485_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2377,COG:M,KEGG:K09001,RefSeq:WP_000835082.1,SO:0001217,UniParc:UPI0001C22E87,UniRef:UniRef100_A0A066T0G4,UniRef:UniRef50_P77570,UniRef:UniRef90_P77570;ec_number=2.7.1.170
contig_1	Pyrodigal	gene	1620832	1621299	.	+	.	ID=GCA000010485_01587_gene;locus_tag=GCA000010485_01587;gene=slyB
contig_1	Pyrodigal	CDS	1620832	1621299	.	+	0	ID=GCA000010485_01587;Name=outer membrane lipoprotein SlyB;locus_tag=GCA000010485_01587;product=outer membrane lipoprotein SlyB;Dbxref=GO:0009279;gene=slyB;Parent=GCA000010485_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000597179,COG:COG3133,COG:M,KEGG:K06077,RefSeq:WP_000597201.1,SO:0001217,UniParc:UPI00000E4A08,UniRef:UniRef100_E2QMK5,UniRef:UniRef50_P31484,UniRef:UniRef90_P0A905
contig_1	Pyrodigal	gene	1621346	1621780	.	-	.	ID=GCA000010485_01588_gene;locus_tag=GCA000010485_01588;gene=slyA
contig_1	Pyrodigal	CDS	1621346	1621780	.	-	0	ID=GCA000010485_01588;Name=transcriptional regulator SlyA;locus_tag=GCA000010485_01588;product=transcriptional regulator SlyA;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0006950;gene=slyA;Parent=GCA000010485_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000445640.1,SO:0001217,UniParc:UPI00001E0554,UniRef:UniRef100_P0A4U5,UniRef:UniRef50_P40676,UniRef:UniRef90_P0A8W2
contig_1	Pyrodigal	gene	1621981	1622217	.	+	.	ID=GCA000010485_01589_gene;locus_tag=GCA000010485_01589;gene=ydhI
contig_1	Pyrodigal	CDS	1621981	1622217	.	+	0	ID=GCA000010485_01589;Name=putative protein YdhI;locus_tag=GCA000010485_01589;product=putative protein YdhI;Dbxref=GO:0005886;gene=ydhI;Parent=GCA000010485_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000670994.1,SO:0001217,UniParc:UPI00000DEBEC,UniRef:UniRef100_E2QMK7,UniRef:UniRef50_P64471,UniRef:UniRef90_P64471
contig_1	Pyrodigal	gene	1622220	1623077	.	+	.	ID=GCA000010485_01590_gene;locus_tag=GCA000010485_01590;gene=ydhJ
contig_1	Pyrodigal	CDS	1622220	1623077	.	+	0	ID=GCA000010485_01590;Name=putative protein YdhJ;locus_tag=GCA000010485_01590;product=putative protein YdhJ;Dbxref=GO:0009636,GO:0016020,GO:0022857;gene=ydhJ;Parent=GCA000010485_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_001296098.1,SO:0001217,UniParc:UPI0001C22E88,UniRef:UniRef100_A0A066SZP5,UniRef:UniRef50_P76185,UniRef:UniRef90_P76185
contig_1	Pyrodigal	gene	1623077	1625089	.	+	.	ID=GCA000010485_01591_gene;locus_tag=GCA000010485_01591;gene=ydhK
contig_1	Pyrodigal	CDS	1623077	1625089	.	+	0	ID=GCA000010485_01591;Name=putative transporter YdhK;locus_tag=GCA000010485_01591;product=putative transporter YdhK;Dbxref=GO:0005886,GO:0022857;gene=ydhK;Parent=GCA000010485_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000994342.1,SO:0001217,UniParc:UPI0001C22E89,UniRef:UniRef100_UPI0001C22E89,UniRef:UniRef50_P76186,UniRef:UniRef90_P76186
contig_1	Pyrodigal	gene	1625229	1625750	.	-	.	ID=GCA000010485_01592_gene;locus_tag=GCA000010485_01592;gene=sodC
contig_1	Pyrodigal	CDS	1625229	1625750	.	-	0	ID=GCA000010485_01592;Name=superoxide dismutase [Cu-Zn] SodC;locus_tag=GCA000010485_01592;product=superoxide dismutase [Cu-Zn] SodC;Dbxref=GO:0004784,GO:0005507,GO:0006801,GO:0008270,GO:0019430,GO:0030288,GO:0042597;gene=sodC;Parent=GCA000010485_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2032,COG:P,RefSeq:WP_001296099.1,SO:0001217,UniParc:UPI0001C22E8A,UniRef:UniRef100_A0A066SS32,UniRef:UniRef50_P0AGD1,UniRef:UniRef90_P0AGD1;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1625831	1626727	.	-	.	ID=GCA000010485_01593_gene;locus_tag=GCA000010485_01593;gene=ydhF
contig_1	Pyrodigal	CDS	1625831	1626727	.	-	0	ID=GCA000010485_01593;Name=Oxidoreductase YdhF;locus_tag=GCA000010485_01593;product=Oxidoreductase YdhF;Dbxref=GO:0005829,GO:0016491;gene=ydhF;Parent=GCA000010485_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4989,COG:R,RefSeq:WP_000250634.1,SO:0001217,UniParc:UPI0001C22E8B,UniRef:UniRef100_A0A061L049,UniRef:UniRef50_P76187,UniRef:UniRef90_P76187;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1626776	1627015	.	-	.	ID=GCA000010485_01594_gene;locus_tag=GCA000010485_01594;gene=ydhL
contig_1	Pyrodigal	CDS	1626776	1627015	.	-	0	ID=GCA000010485_01594;Name=putative protein YdhL;locus_tag=GCA000010485_01594;product=putative protein YdhL;Dbxref=GO:0042542;gene=ydhL;Parent=GCA000010485_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3313,COG:R,RefSeq:WP_001531729.1,SO:0001217,UniParc:UPI0001C22E8C,UniRef:UniRef100_A0A0A2RZW1,UniRef:UniRef50_P64474,UniRef:UniRef90_P64474
contig_1	Pyrodigal	gene	1627118	1627717	.	+	.	ID=GCA000010485_01595_gene;locus_tag=GCA000010485_01595;gene=nemR
contig_1	Pyrodigal	CDS	1627118	1627717	.	+	0	ID=GCA000010485_01595;Name=DNA-binding transcriptional regulator NemR;locus_tag=GCA000010485_01595;product=DNA-binding transcriptional regulator NemR;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=nemR;Parent=GCA000010485_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001032936,COG:COG1309,COG:K,RefSeq:WP_001032936.1,SO:0001217,UniParc:UPI000013A9B4,UniRef:UniRef100_P67430,UniRef:UniRef50_P67430,UniRef:UniRef90_P67430
contig_1	Pyrodigal	gene	1627754	1628851	.	+	.	ID=GCA000010485_01596_gene;locus_tag=GCA000010485_01596;gene=nemA
contig_1	Pyrodigal	CDS	1627754	1628851	.	+	0	ID=GCA000010485_01596;Name=N-ethylmaleimide reductase;locus_tag=GCA000010485_01596;product=N-ethylmaleimide reductase;Dbxref=GO:0005829,GO:0006805,GO:0008748,GO:0010181,GO:0018937,GO:0034567,GO:0046256,GO:0046857;gene=nemA;Parent=GCA000010485_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000093589,COG:C,COG:COG1902,RefSeq:WP_000093582.1,SO:0001217,UniParc:UPI00005F0332,UniRef:UniRef100_J7QRL9,UniRef:UniRef50_P77258,UniRef:UniRef90_P77258;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	1628932	1629339	.	+	.	ID=GCA000010485_01597_gene;locus_tag=GCA000010485_01597;gene=gloA
contig_1	Pyrodigal	CDS	1628932	1629339	.	+	0	ID=GCA000010485_01597;Name=lactoylglutathione lyase;locus_tag=GCA000010485_01597;product=lactoylglutathione lyase;Dbxref=GO:0004462,GO:0005737,GO:0005829,GO:0009636,GO:0016151,GO:0019243,GO:0042803;gene=gloA;Parent=GCA000010485_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_001237802.1,SO:0001217,UniParc:UPI00000DEBF3,UniRef:UniRef100_E2QML5,UniRef:UniRef50_P0AC81,UniRef:UniRef90_P0AC81;ec_number=4.4.1.5
contig_1	Pyrodigal	gene	1629442	1630089	.	+	.	ID=GCA000010485_01598_gene;locus_tag=GCA000010485_01598;gene=rnt
contig_1	Pyrodigal	CDS	1629442	1630089	.	+	0	ID=GCA000010485_01598;Name=ribonuclease T;locus_tag=GCA000010485_01598;product=ribonuclease T;Dbxref=GO:0000287,GO:0003676,GO:0005829,GO:0006364,GO:0008033,GO:0008408,GO:0016896,GO:0042780,GO:0045004;gene=rnt;Parent=GCA000010485_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,KEGG:K03683,RefSeq:WP_001282280.1,SO:0001217,UniParc:UPI000187BC03,UniRef:UniRef100_A0A061YND7,UniRef:UniRef50_P30014,UniRef:UniRef90_P30014;ec_number=3.1.13.-
contig_1	Pyrodigal	gene	1630461	1630808	.	-	.	ID=GCA000010485_01599_gene;locus_tag=GCA000010485_01599;gene=grxD
contig_1	Pyrodigal	CDS	1630461	1630808	.	-	0	ID=GCA000010485_01599;Name=monothiol glutaredoxin 4;locus_tag=GCA000010485_01599;product=monothiol glutaredoxin 4;Dbxref=GO:0005737,GO:0015036,GO:0016491,GO:0046872,GO:0051537;gene=grxD;Parent=GCA000010485_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000108172,COG:COG0278,COG:O,RefSeq:WP_000108172.1,SO:0001217,UniParc:UPI000013A9A5,UniRef:UniRef100_P0AC69,UniRef:UniRef50_P0AC69,UniRef:UniRef90_P0AC69
contig_1	Pyrodigal	gene	1631143	1631970	.	+	.	ID=GCA000010485_01600_gene;locus_tag=GCA000010485_01600;gene=mepH
contig_1	Pyrodigal	CDS	1631143	1631970	.	+	0	ID=GCA000010485_01600;Name=peptidoglycan DD-endopeptidase MepH;locus_tag=GCA000010485_01600;product=peptidoglycan DD-endopeptidase MepH;Dbxref=GO:0000270,GO:0004175,GO:0006508,GO:0008234,GO:0045227,GO:0071555;gene=mepH;Parent=GCA000010485_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000101193,COG:COG0791,COG:M,KEGG:K19303,RefSeq:WP_000101207.1,SO:0001217,UniParc:UPI00000E4A0A,UniRef:UniRef100_A0A061YP40,UniRef:UniRef50_P76190,UniRef:UniRef90_P76190;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1632098	1632679	.	+	.	ID=GCA000010485_01601_gene;locus_tag=GCA000010485_01601;gene=sodB
contig_1	Pyrodigal	CDS	1632098	1632679	.	+	0	ID=GCA000010485_01601;Name=superoxide dismutase [Fe];locus_tag=GCA000010485_01601;product=superoxide dismutase [Fe];Dbxref=GO:0004784,GO:0006801,GO:0046872;gene=sodB;Parent=GCA000010485_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000007273.1,SO:0001217,UniParc:UPI0001C22B18,UniRef:UniRef100_A0A066T0H7,UniRef:UniRef50_P0AGD3,UniRef:UniRef90_P0AGD3;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1632825	1633994	.	-	.	ID=GCA000010485_01602_gene;locus_tag=GCA000010485_01602;gene=ydhP
contig_1	Pyrodigal	CDS	1632825	1633994	.	-	0	ID=GCA000010485_01602;Name=Inner membrane transport protein YdhP;locus_tag=GCA000010485_01602;product=Inner membrane transport protein YdhP;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=ydhP;Parent=GCA000010485_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K19577,RefSeq:WP_000701057.1,SO:0001217,UniParc:UPI0001C22B19,UniRef:UniRef100_A0A066SS42,UniRef:UniRef50_P77389,UniRef:UniRef90_P77389
contig_1	Infernal	gene	1634157	1634547	.	-	.	ID=GCA000010485_01603_gene;locus_tag=GCA000010485_01603;gene=STnc550
contig_1	Infernal	ncRNA	1634157	1634547	2.9e-43	-	.	ID=GCA000010485_01603;Name=Enterobacterial sRNA STnc550;locus_tag=GCA000010485_01603;product=Enterobacterial sRNA STnc550;Dbxref=RFAM:RF02081;Parent=GCA000010485_01603_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02081
contig_1	Pyrodigal	gene	1634160	1634249	.	-	.	ID=GCA000010485_01604_gene;locus_tag=GCA000010485_01604;gene=ynhF
contig_1	Pyrodigal	CDS	1634160	1634249	.	-	0	ID=GCA000010485_01604;Name=stress response protein YnhF;locus_tag=GCA000010485_01604;product=stress response protein YnhF;Dbxref=GO:0005886,GO:0016020,GO:0070069,GO:0071456;gene=ynhF;Parent=GCA000010485_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000102278,RefSeq:WP_000102278.1,SO:0001217,UniParc:UPI0000DACE60,UniRef:UniRef100_A5A618,UniRef:UniRef50_A5A618,UniRef:UniRef90_A5A618
contig_1	Pyrodigal	gene	1634548	1635573	.	+	.	ID=GCA000010485_01605_gene;locus_tag=GCA000010485_01605;gene=purR
contig_1	Pyrodigal	CDS	1634548	1635573	.	+	0	ID=GCA000010485_01605;Name=HTH-type transcriptional repressor PurR;locus_tag=GCA000010485_01605;product=HTH-type transcriptional repressor PurR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006164,GO:0006355,GO:0045892;gene=purR;Parent=GCA000010485_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000190985.1,SO:0001217,UniParc:UPI0000D5096E,UniRef:UniRef100_B7URZ9,UniRef:UniRef50_P0ACP7,UniRef:UniRef90_P0ACP7
contig_1	Pyrodigal	gene	1635570	1636502	.	-	.	ID=GCA000010485_01606_gene;locus_tag=GCA000010485_01606;gene=punR
contig_1	Pyrodigal	CDS	1635570	1636502	.	-	0	ID=GCA000010485_01606;Name=DNA-binding transcriptional activator PunR;locus_tag=GCA000010485_01606;product=DNA-binding transcriptional activator PunR;Dbxref=GO:0003700,GO:0006355;gene=punR;Parent=GCA000010485_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000269498.1,SO:0001217,UniParc:UPI0001C22B1A,UniRef:UniRef100_A0A061KXH7,UniRef:UniRef50_A0A486DFK8,UniRef:UniRef90_A0A061KXH7
contig_1	Pyrodigal	gene	1636615	1637826	.	+	.	ID=GCA000010485_01607_gene;locus_tag=GCA000010485_01607;gene=punC
contig_1	Pyrodigal	CDS	1636615	1637826	.	+	0	ID=GCA000010485_01607;Name=purine nucleoside transporter PunC;locus_tag=GCA000010485_01607;product=purine nucleoside transporter PunC;Dbxref=GO:0005886,GO:0015211,GO:0015860,GO:0016020,GO:0022857,GO:0042910,GO:1990961;gene=punC;Parent=GCA000010485_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_001182336.1,SO:0001217,UniParc:UPI00000DEBF9,UniRef:UniRef100_A0A067HJ81,UniRef:UniRef50_P37597,UniRef:UniRef90_P37597
contig_1	Pyrodigal	gene	1638117	1639265	.	+	.	ID=GCA000010485_01608_gene;locus_tag=GCA000010485_01608;gene=cfa
contig_1	Pyrodigal	CDS	1638117	1639265	.	+	0	ID=GCA000010485_01608;Name=cyclopropane fatty acyl phospholipid synthase;locus_tag=GCA000010485_01608;product=cyclopropane fatty acyl phospholipid synthase;Dbxref=GO:0005829,GO:0006633,GO:0008610,GO:0008825,GO:0030258,GO:0031234,GO:0032259,GO:0042803,GO:0071890;gene=cfa;Parent=GCA000010485_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000098896.1,SO:0001217,UniParc:UPI0000167DB0,UniRef:UniRef100_P0A9H7,UniRef:UniRef50_P0A9H7,UniRef:UniRef90_P0A9H7;ec_number=2.1.1.79
contig_1	Pyrodigal	gene	1639305	1639946	.	-	.	ID=GCA000010485_01609_gene;locus_tag=GCA000010485_01609;gene=ribE
contig_1	Pyrodigal	CDS	1639305	1639946	.	-	0	ID=GCA000010485_01609;Name=riboflavin synthase;locus_tag=GCA000010485_01609;product=riboflavin synthase;Dbxref=GO:0004746,GO:0005829,GO:0009231;gene=ribE;Parent=GCA000010485_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_000493947.1,SO:0001217,UniParc:UPI0000113130,UniRef:UniRef100_P0AFU8,UniRef:UniRef50_P0AFU8,UniRef:UniRef90_P0AFU8;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1640161	1641534	.	+	.	ID=GCA000010485_01610_gene;locus_tag=GCA000010485_01610;gene=mdtK
contig_1	Pyrodigal	CDS	1640161	1641534	.	+	0	ID=GCA000010485_01610;Name=multidrug efflux MATE transporter MdtK;locus_tag=GCA000010485_01610;product=multidrug efflux MATE transporter MdtK;Dbxref=GO:0005886,GO:0006814,GO:0006855,GO:0015297,GO:0042910;gene=mdtK;Parent=GCA000010485_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001174940,BlastRules:WP_001175075,COG:COG0534,COG:V,RefSeq:WP_001174939.1,SO:0001217,UniParc:UPI00016A2053,UniRef:UniRef100_B7NBB6,UniRef:UniRef50_P37340,UniRef:UniRef90_P37340
contig_1	Pyrodigal	gene	1641575	1642831	.	-	.	ID=GCA000010485_01611_gene;locus_tag=GCA000010485_01611;gene=ydhQ
contig_1	Pyrodigal	CDS	1641575	1642831	.	-	0	ID=GCA000010485_01611;Name=Protein YdhQ;locus_tag=GCA000010485_01611;product=Protein YdhQ;Dbxref=GO:0006974;gene=ydhQ;Parent=GCA000010485_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3468,COG:MU,RefSeq:WP_000534260.1,SO:0001217,UniParc:UPI0001C22B1B,UniRef:UniRef100_A0A061YMC3,UniRef:UniRef50_P77552,UniRef:UniRef90_P77552
contig_1	tRNAscan-SE	gene	1643139	1643215	.	+	.	ID=GCA000010485_01612_gene;locus_tag=GCA000010485_01612;gene=trnV
contig_1	tRNAscan-SE	tRNA	1643139	1643215	.	+	.	ID=GCA000010485_01612;Name=tRNA-Val(gac);locus_tag=GCA000010485_01612;product=tRNA-Val(gac);gene=trnV;anti_codon=gac;amino_acid=Val;Parent=GCA000010485_01612_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	1643220	1643296	.	+	.	ID=GCA000010485_01613_gene;locus_tag=GCA000010485_01613;gene=trnV
contig_1	tRNAscan-SE	tRNA	1643220	1643296	.	+	.	ID=GCA000010485_01613;Name=tRNA-Val(gac);locus_tag=GCA000010485_01613;product=tRNA-Val(gac);gene=trnV;anti_codon=gac;amino_acid=Val;Parent=GCA000010485_01613_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Infernal	gene	1643258	1643421	.	-	.	ID=GCA000010485_01614_gene;locus_tag=GCA000010485_01614;gene=HPnc0260
contig_1	Infernal	ncRNA	1643258	1643421	6.6e-17	-	.	ID=GCA000010485_01614;Name=Bacterial antisense RNA HPnc0260;locus_tag=GCA000010485_01614;product=Bacterial antisense RNA HPnc0260;Dbxref=RFAM:RF02194;Parent=GCA000010485_01614_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02194
contig_1	Pyrodigal	gene	1643405	1643710	.	+	.	ID=GCA000010485_01615_gene;locus_tag=GCA000010485_01615
contig_1	Pyrodigal	CDS	1643405	1643710	.	+	0	ID=GCA000010485_01615;Name=monooxygenase;locus_tag=GCA000010485_01615;product=monooxygenase;Parent=GCA000010485_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000212681.1,SO:0001217,UniParc:UPI0001C22B1C,UniRef:UniRef100_A0A061KVJ9,UniRef:UniRef50_P0ACX3,UniRef:UniRef90_A0A061KVJ9
contig_1	Pyrodigal	gene	1643836	1645440	.	+	.	ID=GCA000010485_01616_gene;locus_tag=GCA000010485_01616;gene=ydhS
contig_1	Pyrodigal	CDS	1643836	1645440	.	+	0	ID=GCA000010485_01616;Name=FAD-NAD(P)-binding protein;locus_tag=GCA000010485_01616;product=FAD-NAD(P)-binding protein;gene=ydhS;Parent=GCA000010485_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848170.1,SO:0001217,UniParc:UPI0001C22B1D,UniRef:UniRef100_A0A061KUR0,UniRef:UniRef50_P77148,UniRef:UniRef90_P77148
contig_1	Pyrodigal	gene	1645452	1646216	.	-	.	ID=GCA000010485_01617_gene;locus_tag=GCA000010485_01617;gene=ydhT
contig_1	Pyrodigal	CDS	1645452	1646216	.	-	0	ID=GCA000010485_01617;Name=protein YdhT;locus_tag=GCA000010485_01617;product=protein YdhT;gene=ydhT;Parent=GCA000010485_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P77147,UniRef:UniRef90_P77147
contig_1	Pyrodigal	gene	1646268	1647053	.	-	.	ID=GCA000010485_01618_gene;locus_tag=GCA000010485_01618;gene=phsC
contig_1	Pyrodigal	CDS	1646268	1647053	.	-	0	ID=GCA000010485_01618;Name=thiosulfate reductase cytochrome B subunit;locus_tag=GCA000010485_01618;product=thiosulfate reductase cytochrome B subunit;Dbxref=GO:0005886,GO:0009055,GO:0020037,GO:0022904,GO:0046872;gene=phsC;Parent=GCA000010485_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4117,COG:P,KEGG:K08354,RefSeq:WP_001070015.1,SO:0001217,UniParc:UPI0001C22B1F,UniRef:UniRef100_A0A061L026,UniRef:UniRef50_P77409,UniRef:UniRef90_P77409
contig_1	Pyrodigal	gene	1647050	1647718	.	-	.	ID=GCA000010485_01619_gene;locus_tag=GCA000010485_01619
contig_1	Pyrodigal	CDS	1647050	1647718	.	-	0	ID=GCA000010485_01619;Name=4Fe-4S dicluster domain-containing protein;locus_tag=GCA000010485_01619;product=4Fe-4S dicluster domain-containing protein;Parent=GCA000010485_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296101.1,SO:0001217,UniParc:UPI0002A2C9A2,UniRef:UniRef100_A0A1Y5C2M3,UniRef:UniRef90_P77375
contig_1	Pyrodigal	gene	1647782	1648420	.	-	.	ID=GCA000010485_01620_gene;locus_tag=GCA000010485_01620;gene=ydhW
contig_1	Pyrodigal	CDS	1647782	1648420	.	-	0	ID=GCA000010485_01620;Name=YdhW family putative oxidoreductase system protein;locus_tag=GCA000010485_01620;product=YdhW family putative oxidoreductase system protein;gene=ydhW;Parent=GCA000010485_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296102.1,SO:0001217,UniParc:UPI0001C22B21,UniRef:UniRef100_A0A192C7E9,UniRef:UniRef50_P77564,UniRef:UniRef90_P77564
contig_1	Pyrodigal	gene	1648433	1650535	.	-	.	ID=GCA000010485_01621_gene;locus_tag=GCA000010485_01621;gene=ydhV
contig_1	Pyrodigal	CDS	1648433	1650535	.	-	0	ID=GCA000010485_01621;Name=aldehyde ferredoxin oxidoreductase;locus_tag=GCA000010485_01621;product=aldehyde ferredoxin oxidoreductase;Dbxref=GO:0009055,GO:0016491,GO:0016625,GO:0043546,GO:0046872,GO:0051536,GO:0051539;gene=ydhV;Parent=GCA000010485_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03738,RefSeq:WP_001273524.1,SO:0001217,UniParc:UPI0000DACE65,UniRef:UniRef100_A0AAF0STK3,UniRef:UniRef50_P76192,UniRef:UniRef90_P76192;ec_number=1.2.7.5
contig_1	Pyrodigal	gene	1650556	1651182	.	-	.	ID=GCA000010485_01622_gene;locus_tag=GCA000010485_01622;gene=ydhY
contig_1	Pyrodigal	CDS	1650556	1651182	.	-	0	ID=GCA000010485_01622;Name=ferredoxin-like protein;locus_tag=GCA000010485_01622;product=ferredoxin-like protein;Dbxref=GO:0046872,GO:0051539;gene=ydhY;Parent=GCA000010485_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001070248.1,SO:0001217,UniParc:UPI0001C22B22,UniRef:UniRef100_A0A061KZD0,UniRef:UniRef50_P0AAL6,UniRef:UniRef90_P0AAL6
contig_1	Pyrodigal	gene	1651638	1651847	.	-	.	ID=GCA000010485_01623_gene;locus_tag=GCA000010485_01623;gene=fumD
contig_1	Pyrodigal	CDS	1651638	1651847	.	-	0	ID=GCA000010485_01623;Name=fumarate hydratase FumD;locus_tag=GCA000010485_01623;product=fumarate hydratase FumD;Dbxref=GO:0004333;gene=fumD;Parent=GCA000010485_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01675,RefSeq:WP_000528342.1,SO:0001217,UniParc:UPI000013A9C5,UniRef:UniRef100_P0ACX5,UniRef:UniRef50_P0ACX5,UniRef:UniRef90_P0ACX5;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1652404	1653816	.	+	.	ID=GCA000010485_01624_gene;locus_tag=GCA000010485_01624;gene=pykF
contig_1	Pyrodigal	CDS	1652404	1653816	.	+	0	ID=GCA000010485_01624;Name=pyruvate kinase PykF;locus_tag=GCA000010485_01624;product=pyruvate kinase PykF;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0005737,GO:0005829,GO:0006096,GO:0016301,GO:0030955;gene=pykF;Parent=GCA000010485_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0469,COG:G,KEGG:K00873,RefSeq:WP_001295403.1,SO:0001217,UniParc:UPI000012DFF0,UniRef:UniRef100_P0AD61,UniRef:UniRef50_P0AD61,UniRef:UniRef90_P0AD61;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1654127	1654363	.	+	.	ID=GCA000010485_01625_gene;locus_tag=GCA000010485_01625;gene=lpp
contig_1	Pyrodigal	CDS	1654127	1654363	.	+	0	ID=GCA000010485_01625;Name=murein lipoprotein Lpp;locus_tag=GCA000010485_01625;product=murein lipoprotein Lpp;Dbxref=GO:0005576,GO:0008289,GO:0009279,GO:0016020,GO:0030258,GO:0030288,GO:0042802,GO:0042834,GO:0043580;gene=lpp;Parent=GCA000010485_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000648420,COG:COG4238,COG:M,RefSeq:WP_000648420.1,SO:0001217,UniParc:UPI000012F8F5,UniRef:UniRef100_P69776,UniRef:UniRef50_P69776,UniRef:UniRef90_P69776
contig_1	Pyrodigal	gene	1654426	1655430	.	-	.	ID=GCA000010485_01626_gene;locus_tag=GCA000010485_01626;gene=ldtE
contig_1	Pyrodigal	CDS	1654426	1655430	.	-	0	ID=GCA000010485_01626;Name=L%2CD-transpeptidase LdtE;locus_tag=GCA000010485_01626;product=L%2CD-transpeptidase LdtE;Dbxref=GO:0008360,GO:0009252,GO:0016757,GO:0018104,GO:0042597,GO:0071555,GO:0071972;gene=ldtE;Parent=GCA000010485_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000817105,COG:COG1376,COG:M,KEGG:K19234,RefSeq:WP_000817127.1,SO:0001217,UniParc:UPI0001C22B23,UniRef:UniRef100_A0A7I0KPD8,UniRef:UniRef50_P76193,UniRef:UniRef90_P76193;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	1655579	1655995	.	-	.	ID=GCA000010485_01627_gene;locus_tag=GCA000010485_01627;gene=sufE
contig_1	Pyrodigal	CDS	1655579	1655995	.	-	0	ID=GCA000010485_01627;Name=cysteine desulfuration protein SufE;locus_tag=GCA000010485_01627;product=cysteine desulfuration protein SufE;Dbxref=GO:0005737,GO:0006790,GO:0016226;gene=sufE;Parent=GCA000010485_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2166,COG:OJ,RefSeq:WP_001196522.1,SO:0001217,UniParc:UPI00000DEC08,UniRef:UniRef100_B7US18,UniRef:UniRef50_P76194,UniRef:UniRef90_P76194
contig_1	Pyrodigal	gene	1656008	1657228	.	-	.	ID=GCA000010485_01628_gene;locus_tag=GCA000010485_01628;gene=sufS
contig_1	Pyrodigal	CDS	1656008	1657228	.	-	0	ID=GCA000010485_01628;Name=cysteine desulfurase SufS;locus_tag=GCA000010485_01628;product=cysteine desulfurase SufS;Dbxref=GO:0005737,GO:0006534,GO:0009000,GO:0030170,GO:0031071;gene=sufS;Parent=GCA000010485_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11717,RefSeq:WP_000144574.1,SO:0001217,UniParc:UPI0001C22B24,UniRef:UniRef100_A0A7I0KPF7,UniRef:UniRef50_P77444,UniRef:UniRef90_Q7UAH4;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1657225	1658496	.	-	.	ID=GCA000010485_01629_gene;locus_tag=GCA000010485_01629;gene=sufD
contig_1	Pyrodigal	CDS	1657225	1658496	.	-	0	ID=GCA000010485_01629;Name=Fe-S cluster assembly protein SufD;locus_tag=GCA000010485_01629;product=Fe-S cluster assembly protein SufD;Dbxref=GO:0006979,GO:0016226,GO:1990229;gene=sufD;Parent=GCA000010485_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,KEGG:K09015,RefSeq:WP_000907967.1,SO:0001217,UniParc:UPI0001C22B25,UniRef:UniRef100_A0A7I0KQU7,UniRef:UniRef50_P77689,UniRef:UniRef90_P77689
contig_1	Pyrodigal	gene	1658471	1659217	.	-	.	ID=GCA000010485_01630_gene;locus_tag=GCA000010485_01630;gene=sufC
contig_1	Pyrodigal	CDS	1658471	1659217	.	-	0	ID=GCA000010485_01630;Name=Fe-S cluster assembly ATPase SufC;locus_tag=GCA000010485_01630;product=Fe-S cluster assembly ATPase SufC;Dbxref=GO:0005524,GO:0005829,GO:0009314,GO:0016226,GO:0016887,GO:1990229;gene=sufC;Parent=GCA000010485_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0396,COG:O,RefSeq:WP_000948908.1,SO:0001217,UniParc:UPI0001C22B26,UniRef:UniRef100_A0A7I0KPC3,UniRef:UniRef50_P77499,UniRef:UniRef90_P77499
contig_1	Pyrodigal	gene	1659227	1660714	.	-	.	ID=GCA000010485_01631_gene;locus_tag=GCA000010485_01631;gene=sufB
contig_1	Pyrodigal	CDS	1659227	1660714	.	-	0	ID=GCA000010485_01631;Name=Fe-S cluster assembly protein SufB;locus_tag=GCA000010485_01631;product=Fe-S cluster assembly protein SufB;Dbxref=GO:0016226;gene=sufB;Parent=GCA000010485_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,KEGG:K09014,RefSeq:WP_001304330.1,SO:0001217,UniParc:UPI0001886467,UniRef:UniRef100_A0A0D8VZS0,UniRef:UniRef50_P77522,UniRef:UniRef90_P77522
contig_1	Pyrodigal	gene	1660723	1661091	.	-	.	ID=GCA000010485_01632_gene;locus_tag=GCA000010485_01632;gene=sufA
contig_1	Pyrodigal	CDS	1660723	1661091	.	-	0	ID=GCA000010485_01632;Name=Fe-S cluster assembly scaffold SufA;locus_tag=GCA000010485_01632;product=Fe-S cluster assembly scaffold SufA;Dbxref=GO:0005737,GO:0005829,GO:0006979,GO:0016226,GO:0042803,GO:0046872,GO:0051537,GO:0051539,GO:0097428,GO:1990230;gene=sufA;Parent=GCA000010485_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000367158.1,SO:0001217,UniParc:UPI00000DEC0D,UniRef:UniRef100_A0A066SVT4,UniRef:UniRef50_P77667,UniRef:UniRef90_P77667
contig_1	Infernal	gene	1661412	1661472	.	-	.	ID=GCA000010485_01633_gene;locus_tag=GCA000010485_01633;gene=rydB
contig_1	Infernal	ncRNA	1661412	1661472	1.7e-15	-	.	ID=GCA000010485_01633;Name=rydB RNA;locus_tag=GCA000010485_01633;gene=rydB;product=rydB RNA;Dbxref=RFAM:RF00118;Parent=GCA000010485_01633_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00118
contig_1	Pyrodigal	gene	1661639	1661827	.	-	.	ID=GCA000010485_01634_gene;locus_tag=GCA000010485_01634;gene=ydiH
contig_1	Pyrodigal	CDS	1661639	1661827	.	-	0	ID=GCA000010485_01634;Name=putative protein YdiH;locus_tag=GCA000010485_01634;product=putative protein YdiH;gene=ydiH;Parent=GCA000010485_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296104.1,SO:0001217,UniParc:UPI00005F23FA,UniRef:UniRef100_P64476,UniRef:UniRef50_P64476,UniRef:UniRef90_P64476
contig_1	Pyrodigal	gene	1661927	1662337	.	-	.	ID=GCA000010485_01635_gene;locus_tag=GCA000010485_01635;gene=menI
contig_1	Pyrodigal	CDS	1661927	1662337	.	-	0	ID=GCA000010485_01635;Name=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;locus_tag=GCA000010485_01635;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;Dbxref=GO:0005829,GO:0009234,GO:0016289,GO:0016787,GO:0061522;gene=menI;Parent=GCA000010485_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000637986.1,SO:0001217,UniParc:UPI00000DEC0F,UniRef:UniRef100_E2QMP7,UniRef:UniRef50_P77781,UniRef:UniRef90_P77781;ec_number=3.1.2.28
contig_1	Pyrodigal	gene	1662334	1665390	.	-	.	ID=GCA000010485_01636_gene;locus_tag=GCA000010485_01636;gene=ydiJ
contig_1	Pyrodigal	CDS	1662334	1665390	.	-	0	ID=GCA000010485_01636;Name=D-2-hydroxyglutarate dehydrogenase;locus_tag=GCA000010485_01636;product=D-2-hydroxyglutarate dehydrogenase;Dbxref=GO:0004458,GO:0008720,GO:0046872,GO:0050660,GO:0051539,GO:0071949,GO:1903457;gene=ydiJ;Parent=GCA000010485_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0277,KEGG:K26063,RefSeq:WP_000612989.1,SO:0001217,UniParc:UPI0001C22B27,UniRef:UniRef100_A0A7I0KPA3,UniRef:UniRef50_P77748,UniRef:UniRef90_P77748;ec_number=1.1.99.39
contig_1	Pyrodigal	gene	1665604	1666716	.	+	.	ID=GCA000010485_01637_gene;locus_tag=GCA000010485_01637;gene=ydiK
contig_1	Pyrodigal	CDS	1665604	1666716	.	+	0	ID=GCA000010485_01637;Name=AI-2E family transporter YdiK;locus_tag=GCA000010485_01637;product=AI-2E family transporter YdiK;Dbxref=GO:0005886;gene=ydiK;Parent=GCA000010485_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000248637.1,SO:0001217,UniParc:UPI00000DEC11,UniRef:UniRef100_A0A061YG26,UniRef:UniRef50_P0AFS7,UniRef:UniRef90_P0AFS7
contig_1	Infernal	gene	1666902	1667009	.	+	.	ID=GCA000010485_01638_gene;locus_tag=GCA000010485_01638;gene=rprA
contig_1	Infernal	ncRNA	1666902	1667009	1.3e-17	+	.	ID=GCA000010485_01638;Name=RprA RNA;locus_tag=GCA000010485_01638;gene=rprA;product=RprA RNA;Dbxref=RFAM:RF00034;Parent=GCA000010485_01638_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00034
contig_1	Pyrodigal	gene	1667145	1667501	.	+	.	ID=GCA000010485_01639_gene;locus_tag=GCA000010485_01639;gene=ydiL
contig_1	Pyrodigal	CDS	1667145	1667501	.	+	0	ID=GCA000010485_01639;Name=putative protein YdiL;locus_tag=GCA000010485_01639;product=putative protein YdiL;Dbxref=GO:0003677;gene=ydiL;Parent=GCA000010485_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296105.1,SO:0001217,UniParc:UPI0002185A0F,UniRef:UniRef100_A0A061KZB5,UniRef:UniRef50_P76196,UniRef:UniRef90_P76196
contig_1	Pyrodigal	gene	1667601	1668815	.	+	.	ID=GCA000010485_01640_gene;locus_tag=GCA000010485_01640;gene=ydiM
contig_1	Pyrodigal	CDS	1667601	1668815	.	+	0	ID=GCA000010485_01640;Name=Inner membrane transport protein YdiM;locus_tag=GCA000010485_01640;product=Inner membrane transport protein YdiM;Dbxref=GO:0005886,GO:0016020,GO:0022857;gene=ydiM;Parent=GCA000010485_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26745,RefSeq:WP_000795578.1,SO:0001217,UniParc:UPI00000DEC13,UniRef:UniRef100_E2QMQ1,UniRef:UniRef50_P76197,UniRef:UniRef90_P76197
contig_1	Pyrodigal	gene	1669042	1670307	.	+	.	ID=GCA000010485_01641_gene;locus_tag=GCA000010485_01641;gene=ydiN
contig_1	Pyrodigal	CDS	1669042	1670307	.	+	0	ID=GCA000010485_01641;Name=Inner membrane transport protein YdiN;locus_tag=GCA000010485_01641;product=Inner membrane transport protein YdiN;Dbxref=GO:0005886,GO:0016020,GO:0022857;gene=ydiN;Parent=GCA000010485_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26745,RefSeq:WP_012896802.1,SO:0001217,UniParc:UPI0001C22E17,UniRef:UniRef100_UPI0001C22E17,UniRef:UniRef50_P76198,UniRef:UniRef90_P76198
contig_1	Pyrodigal	gene	1670319	1671185	.	+	.	ID=GCA000010485_01642_gene;locus_tag=GCA000010485_01642;gene=ydiB
contig_1	Pyrodigal	CDS	1670319	1671185	.	+	0	ID=GCA000010485_01642;Name=quinate/shikimate dehydrogenase;locus_tag=GCA000010485_01642;product=quinate/shikimate dehydrogenase;Dbxref=GO:0004764,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0030266,GO:0042803,GO:0052733,GO:0052734;gene=ydiB;Parent=GCA000010485_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_000383469.1,SO:0001217,UniParc:UPI000013A9CD,UniRef:UniRef100_P0A6D5,UniRef:UniRef50_P0A6D5,UniRef:UniRef90_P0A6D5;ec_number=1.1.1.282
contig_1	Pyrodigal	gene	1671216	1671974	.	+	.	ID=GCA000010485_01643_gene;locus_tag=GCA000010485_01643;gene=aroD
contig_1	Pyrodigal	CDS	1671216	1671974	.	+	0	ID=GCA000010485_01643;Name=3-dehydroquinate dehydratase;locus_tag=GCA000010485_01643;product=3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0008652,GO:0009073,GO:0009423,GO:0046279;gene=aroD;Parent=GCA000010485_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0710,COG:E,RefSeq:WP_000860201.1,SO:0001217,UniParc:UPI0000125FC0,UniRef:UniRef100_P05194,UniRef:UniRef50_P05194,UniRef:UniRef90_P05194;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	1672121	1673716	.	+	.	ID=GCA000010485_01644_gene;locus_tag=GCA000010485_01644;gene=ydiF
contig_1	Pyrodigal	CDS	1672121	1673716	.	+	0	ID=GCA000010485_01644;Name=Acetate CoA-transferase YdiF;locus_tag=GCA000010485_01644;product=Acetate CoA-transferase YdiF;Dbxref=GO:0008775,GO:0046459,GO:0046952,GO:0051289;gene=ydiF;Parent=GCA000010485_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19709,RefSeq:WP_000805657.1,SO:0001217,UniParc:UPI0001C22E18,UniRef:UniRef100_A0A061KZB0,UniRef:UniRef50_Q8X5X6,UniRef:UniRef90_Q8X5X6;ec_number=2.8.3.8
contig_1	Pyrodigal	gene	1673730	1674881	.	+	.	ID=GCA000010485_01645_gene;locus_tag=GCA000010485_01645;gene=ydiO
contig_1	Pyrodigal	CDS	1673730	1674881	.	+	0	ID=GCA000010485_01645;Name=acyl-CoA dehydrogenase;locus_tag=GCA000010485_01645;product=acyl-CoA dehydrogenase;Dbxref=GO:0003995,GO:0005737,GO:0033539,GO:0050660,GO:0071271;gene=ydiO;Parent=GCA000010485_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000347850.1,SO:0001217,UniParc:UPI000013A9DB,UniRef:UniRef100_P0A9U8,UniRef:UniRef50_P0A9U8,UniRef:UniRef90_P0A9U8;ec_number=1.3.8.-
contig_1	Pyrodigal	gene	1674924	1675835	.	-	.	ID=GCA000010485_01646_gene;locus_tag=GCA000010485_01646;gene=ydiP
contig_1	Pyrodigal	CDS	1674924	1675835	.	-	0	ID=GCA000010485_01646;Name=putative HTH-type transcriptional regulator YdiP;locus_tag=GCA000010485_01646;product=putative HTH-type transcriptional regulator YdiP;Dbxref=GO:0003700,GO:0043565;gene=ydiP;Parent=GCA000010485_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000284798.1,SO:0001217,UniParc:UPI00000DEC17,UniRef:UniRef100_E2QMQ7,UniRef:UniRef50_P77402,UniRef:UniRef90_P77402
contig_1	Pyrodigal	gene	1676151	1676915	.	+	.	ID=GCA000010485_01647_gene;locus_tag=GCA000010485_01647;gene=ydiQ
contig_1	Pyrodigal	CDS	1676151	1676915	.	+	0	ID=GCA000010485_01647;Name=electron transfer flavoprotein;locus_tag=GCA000010485_01647;product=electron transfer flavoprotein;Dbxref=GO:0006974,GO:0009055;gene=ydiQ;Parent=GCA000010485_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03521,RefSeq:WP_000692157.1,SO:0001217,UniParc:UPI0000DACE69,UniRef:UniRef100_A0A061KVG8,UniRef:UniRef50_P60566,UniRef:UniRef90_P76201
contig_1	Pyrodigal	gene	1676935	1677873	.	+	.	ID=GCA000010485_01648_gene;locus_tag=GCA000010485_01648;gene=ydiR
contig_1	Pyrodigal	CDS	1676935	1677873	.	+	0	ID=GCA000010485_01648;Name=electron transfer flavoprotein subunit alpha;locus_tag=GCA000010485_01648;product=electron transfer flavoprotein subunit alpha;Dbxref=GO:0009055,GO:0033539,GO:0050660;gene=ydiR;Parent=GCA000010485_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03522,RefSeq:WP_000080739.1,SO:0001217,UniParc:UPI0001C22E19,UniRef:UniRef100_A0A061YG34,UniRef:UniRef50_P77378,UniRef:UniRef90_P77378
contig_1	Pyrodigal	gene	1677928	1679217	.	+	.	ID=GCA000010485_01649_gene;locus_tag=GCA000010485_01649;gene=ydiS
contig_1	Pyrodigal	CDS	1677928	1679217	.	+	0	ID=GCA000010485_01649;Name=putative electron transfer flavoprotein-quinone oxidoreductase YdiS;locus_tag=GCA000010485_01649;product=putative electron transfer flavoprotein-quinone oxidoreductase YdiS;Dbxref=GO:0016491,GO:0071949;gene=ydiS;Parent=GCA000010485_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0644,KEGG:K00313,RefSeq:WP_001278509.1,SO:0001217,UniParc:UPI0001C22E1A,UniRef:UniRef100_A0A066SVU7,UniRef:UniRef50_P77337,UniRef:UniRef90_P77337;ec_number=1.5.5.-
contig_1	Pyrodigal	gene	1679214	1679507	.	+	.	ID=GCA000010485_01650_gene;locus_tag=GCA000010485_01650;gene=ydiT
contig_1	Pyrodigal	CDS	1679214	1679507	.	+	0	ID=GCA000010485_01650;Name=Ferredoxin-like protein YdiT;locus_tag=GCA000010485_01650;product=Ferredoxin-like protein YdiT;Dbxref=GO:0005506,GO:0051536;gene=ydiT;Parent=GCA000010485_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2440,KEGG:K03855,RefSeq:WP_000081065.1,SO:0001217,UniParc:UPI0001C22E1B,UniRef:UniRef100_A0A061YNH1,UniRef:UniRef50_P77714,UniRef:UniRef90_P77714
contig_1	Pyrodigal	gene	1679564	1681210	.	+	.	ID=GCA000010485_01651_gene;locus_tag=GCA000010485_01651;gene=fadK
contig_1	Pyrodigal	CDS	1679564	1681210	.	+	0	ID=GCA000010485_01651;Name=medium-chain fatty-acid--CoA ligase;locus_tag=GCA000010485_01651;product=medium-chain fatty-acid--CoA ligase;Dbxref=GO:0005524,GO:0005886,GO:0006635,GO:0019395,GO:0031956;gene=fadK;Parent=GCA000010485_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296108.1,SO:0001217,UniParc:UPI0001C22E1C,UniRef:UniRef100_A0A3N9T184,UniRef:UniRef50_P38135,UniRef:UniRef90_P38135;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	1681267	1683645	.	-	.	ID=GCA000010485_01652_gene;locus_tag=GCA000010485_01652;gene=ppsA
contig_1	Pyrodigal	CDS	1681267	1683645	.	-	0	ID=GCA000010485_01652;Name=phosphoenolpyruvate synthase;locus_tag=GCA000010485_01652;product=phosphoenolpyruvate synthase;Dbxref=GO:0000287,GO:0005524,GO:0006090,GO:0006094,GO:0008986,GO:0016310,GO:0016772,GO:0042803;gene=ppsA;Parent=GCA000010485_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0574,COG:G,RefSeq:WP_000069403.1,SO:0001217,UniParc:UPI0001C22E1D,UniRef:UniRef100_A0A066SS87,UniRef:UniRef50_P23538,UniRef:UniRef90_P23538;ec_number=2.7.9.2
contig_1	Pyrodigal	gene	1683978	1684811	.	+	.	ID=GCA000010485_01653_gene;locus_tag=GCA000010485_01653;gene=ppsR
contig_1	Pyrodigal	CDS	1683978	1684811	.	+	0	ID=GCA000010485_01653;Name=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;locus_tag=GCA000010485_01653;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;Dbxref=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gene=ppsR;Parent=GCA000010485_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000368046,COG:COG1806,COG:T,RefSeq:WP_000368046.1,SO:0001217,UniParc:UPI000013A9CA,UniRef:UniRef100_P0A8A4,UniRef:UniRef50_P0A8A4,UniRef:UniRef90_P0A8A4;ec_number=2.7.4.28
contig_1	Pyrodigal	gene	1684968	1686014	.	+	.	ID=GCA000010485_01654_gene;locus_tag=GCA000010485_01654;gene=aroH
contig_1	Pyrodigal	CDS	1684968	1686014	.	+	0	ID=GCA000010485_01654;Name=3-deoxy-7-phosphoheptulonate synthase AroH;locus_tag=GCA000010485_01654;product=3-deoxy-7-phosphoheptulonate synthase AroH;Dbxref=GO:0003849,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0016832,GO:0042802;gene=aroH;Parent=GCA000010485_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001082219,COG:COG0722,COG:E,KEGG:K01626,RefSeq:WP_001082226.1,SO:0001217,UniParc:UPI00000DEC1F,UniRef:UniRef100_Q8FH32,UniRef:UniRef50_P00887,UniRef:UniRef90_P00887;ec_number=2.5.1.54
contig_1	Pyrodigal	gene	1686146	1686337	.	+	.	ID=GCA000010485_01655_gene;locus_tag=GCA000010485_01655;gene=ydiE
contig_1	Pyrodigal	CDS	1686146	1686337	.	+	0	ID=GCA000010485_01655;Name=putative protein YdiE;locus_tag=GCA000010485_01655;product=putative protein YdiE;Dbxref=GO:0042803;gene=ydiE;Parent=GCA000010485_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4256,COG:HK,RefSeq:WP_001270810.1,SO:0001217,UniParc:UPI000018F883,UniRef:UniRef100_A0A8S0FT58,UniRef:UniRef50_P0ACX9,UniRef:UniRef90_P0ACX9
contig_1	Pyrodigal	gene	1686341	1687777	.	-	.	ID=GCA000010485_01656_gene;locus_tag=GCA000010485_01656;gene=selO
contig_1	Pyrodigal	CDS	1686341	1687777	.	-	0	ID=GCA000010485_01656;Name=protein adenylyltransferase SelO;locus_tag=GCA000010485_01656;product=protein adenylyltransferase SelO;Dbxref=GO:0000287,GO:0005524,GO:0018117,GO:0070733;gene=selO;Parent=GCA000010485_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08997,RefSeq:WP_000175632.1,SO:0001217,UniParc:UPI0001C22E1F,UniRef:UniRef100_A0A061KXC3,UniRef:UniRef50_P77649,UniRef:UniRef90_P77649;ec_number=2.7.7.108
contig_1	Pyrodigal	gene	1687840	1688553	.	-	.	ID=GCA000010485_01657_gene;locus_tag=GCA000010485_01657;gene=ydiV
contig_1	Pyrodigal	CDS	1687840	1688553	.	-	0	ID=GCA000010485_01657;Name=anti-FlhDC factor;locus_tag=GCA000010485_01657;product=anti-FlhDC factor;gene=ydiV;Parent=GCA000010485_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300634,COG:COG2200,COG:T,RefSeq:WP_001296111.1,SO:0001217,UniParc:UPI0001C22E20,UniRef:UniRef100_A0A066SRY6,UniRef:UniRef50_P76204,UniRef:UniRef90_Q8X5W2
contig_1	Pyrodigal	gene	1688801	1689265	.	-	.	ID=GCA000010485_01658_gene;locus_tag=GCA000010485_01658;gene=nlpC
contig_1	Pyrodigal	CDS	1688801	1689265	.	-	0	ID=GCA000010485_01658;Name=putative endopeptidase NlpC;locus_tag=GCA000010485_01658;product=putative endopeptidase NlpC;Dbxref=GO:0005886,GO:0006508,GO:0008234;gene=nlpC;Parent=GCA000010485_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_001209785.1,SO:0001217,UniParc:UPI00000E4A0D,UniRef:UniRef100_E2QMR9,UniRef:UniRef50_P23898,UniRef:UniRef90_P23898;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1689343	1690092	.	-	.	ID=GCA000010485_01659_gene;locus_tag=GCA000010485_01659;gene=btuD
contig_1	Pyrodigal	CDS	1689343	1690092	.	-	0	ID=GCA000010485_01659;Name=vitamin B12 ABC transporter ATP-binding protein BtuD;locus_tag=GCA000010485_01659;product=vitamin B12 ABC transporter ATP-binding protein BtuD;Dbxref=GO:0005524,GO:0005886,GO:0015420,GO:0015889,GO:0016887;gene=btuD;Parent=GCA000010485_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4138,COG:H,RefSeq:WP_000029460.1,SO:0001217,UniParc:UPI0001C22E21,UniRef:UniRef100_A0A061YK12,UniRef:UniRef50_P06611,UniRef:UniRef90_P06611;ec_number=7.6.2.8
contig_1	Pyrodigal	gene	1690092	1690643	.	-	.	ID=GCA000010485_01660_gene;locus_tag=GCA000010485_01660;gene=btuE
contig_1	Pyrodigal	CDS	1690092	1690643	.	-	0	ID=GCA000010485_01660;Name=bifunctional thioredoxin/glutathione peroxidase;locus_tag=GCA000010485_01660;product=bifunctional thioredoxin/glutathione peroxidase;Dbxref=GO:0000302,GO:0004602,GO:0006979,GO:0008379,GO:0033194,GO:0034599,GO:0042597;gene=btuE;Parent=GCA000010485_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001154168,COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_001154187.1,SO:0001217,UniParc:UPI00005E330C,UniRef:UniRef100_J7R532,UniRef:UniRef50_P06610,UniRef:UniRef90_P06610;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	1690706	1691686	.	-	.	ID=GCA000010485_01661_gene;locus_tag=GCA000010485_01661;gene=btuC
contig_1	Pyrodigal	CDS	1690706	1691686	.	-	0	ID=GCA000010485_01661;Name=vitamin B12 ABC transporter permease BtuC;locus_tag=GCA000010485_01661;product=vitamin B12 ABC transporter permease BtuC;Dbxref=GO:0005524,GO:0005886,GO:0015889,GO:0022857,GO:0090482;gene=btuC;Parent=GCA000010485_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4139,COG:H,RefSeq:WP_000956533.1,SO:0001217,UniParc:UPI0001C22E22,UniRef:UniRef100_A0A066SS99,UniRef:UniRef50_P06609,UniRef:UniRef90_P06609;ec_number=7.6.2.-
contig_1	Infernal	gene	1691687	1691845	.	-	.	ID=GCA000010485_01662_gene;locus_tag=GCA000010485_01662;gene=STnc540
contig_1	Infernal	ncRNA	1691687	1691845	1.5e-07	-	.	ID=GCA000010485_01662;Name=Enterobacterial sRNA STnc540;locus_tag=GCA000010485_01662;product=Enterobacterial sRNA STnc540;Dbxref=RFAM:RF02082;Parent=GCA000010485_01662_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02082
contig_1	Pyrodigal	gene	1691787	1692086	.	-	.	ID=GCA000010485_01663_gene;locus_tag=GCA000010485_01663;gene=ihfA
contig_1	Pyrodigal	CDS	1691787	1692086	.	-	0	ID=GCA000010485_01663;Name=integration host factor subunit alpha;locus_tag=GCA000010485_01663;product=integration host factor subunit alpha;Dbxref=GO:0003677,GO:0005829,GO:0006310,GO:0006355,GO:0006417,GO:0030527;gene=ihfA;Parent=GCA000010485_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_001229265.1,SO:0001217,UniParc:UPI0000111D8F,UniRef:UniRef100_P0A6X7,UniRef:UniRef50_P0A6X7,UniRef:UniRef90_P0A6X7
contig_1	Pyrodigal	gene	1692091	1694478	.	-	.	ID=GCA000010485_01664_gene;locus_tag=GCA000010485_01664;gene=pheT
contig_1	Pyrodigal	CDS	1692091	1694478	.	-	0	ID=GCA000010485_01664;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000010485_01664;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0005829,GO:0006432,GO:0009328,GO:0016020,GO:0042802;gene=pheT;Parent=GCA000010485_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_000672320.1,SO:0001217,UniParc:UPI0001C22E23,UniRef:UniRef100_A0A061YG46,UniRef:UniRef50_P07395,UniRef:UniRef90_P07395;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1694493	1695476	.	-	.	ID=GCA000010485_01665_gene;locus_tag=GCA000010485_01665;gene=pheS
contig_1	Pyrodigal	CDS	1694493	1695476	.	-	0	ID=GCA000010485_01665;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000010485_01665;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432;gene=pheS;Parent=GCA000010485_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0016,COG:J,RefSeq:WP_000018588.1,SO:0001217,UniParc:UPI000013640C,UniRef:UniRef100_B7US97,UniRef:UniRef50_P08312,UniRef:UniRef90_P08312;ec_number=6.1.1.20
contig_1	Infernal	regulatory_region	1695686	1695810	8.2e-11	-	.	ID=EFPPCJGBKI_321;Name=Phenylalanine leader peptide;product=Phenylalanine leader peptide;Dbxref=RFAM:RF01859;inference=profile:Rfam:RF01859;Note=SO:0000140;regulatory_class=attenuator
contig_1	Bakta	gene	1695760	1695804	.	-	.	ID=GCA000010485_01666_gene;locus_tag=GCA000010485_01666;inference=ab initio prediction:Bakta;gene=pheM
contig_1	Bakta	CDS	1695760	1695804	.	-	0	ID=GCA000010485_01666;Name=pheST operon leader peptide PheM;locus_tag=GCA000010485_01666;product=pheST operon leader peptide PheM;Dbxref=GO:0006355,GO:0031556;gene=pheM;Parent=GCA000010485_01666_gene;Note=RefSeq:WP_001386830.1,SO:0001217,UniParc:UPI0000059DC9,UniRef:UniRef100_P0AD74,UniRef:UniRef50_P0AD74,UniRef:UniRef90_P0AD74
contig_1	Pyrodigal	gene	1695927	1696283	.	-	.	ID=GCA000010485_01667_gene;locus_tag=GCA000010485_01667;gene=thrS
contig_1	Pyrodigal	CDS	1695927	1696283	.	-	0	ID=GCA000010485_01667;Name=threonine--tRNA ligase;locus_tag=GCA000010485_01667;product=threonine--tRNA ligase;Dbxref=GO:0000027,GO:0003735,GO:0004829,GO:0005524,GO:0005737,GO:0005840,GO:0006412,GO:0006435,GO:0019843,GO:1990904;gene=thrS;Parent=GCA000010485_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,KEGG:K01868,RefSeq:WP_000124850.1,SO:0001217,UniParc:UPI0000047CBB,UniRef:UniRef100_A8AHA8,UniRef:UniRef50_A8AHA8,UniRef:UniRef90_A8AHA8;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1696336	1696533	.	-	.	ID=GCA000010485_01668_gene;locus_tag=GCA000010485_01668;gene=rpmI
contig_1	Pyrodigal	CDS	1696336	1696533	.	-	0	ID=GCA000010485_01668;Name=50S ribosomal protein L35;locus_tag=GCA000010485_01668;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA000010485_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0291,COG:J,KEGG:K02916,RefSeq:WP_001124225.1,SO:0001217,UniParc:UPI0000047CBC,UniRef:UniRef100_P0A7Q1,UniRef:UniRef50_P0A7Q1,UniRef:UniRef90_P0A7Q1
contig_1	Pyrodigal	gene	1696630	1697064	.	-	.	ID=GCA000010485_01669_gene;locus_tag=GCA000010485_01669;gene=infC
contig_1	Pyrodigal	CDS	1696630	1697064	.	-	0	ID=GCA000010485_01669;Name=translation initiation factor IF-3;locus_tag=GCA000010485_01669;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0006413;gene=infC;Parent=GCA000010485_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000058403.1,SO:0001217,UniParc:UPI0000162269,UniRef:UniRef100_E2QMS8,UniRef:UniRef50_F7WZ22,UniRef:UniRef90_D4GDH5
contig_1	Pyrodigal	gene	1697176	1699104	.	-	.	ID=GCA000010485_01670_gene;locus_tag=GCA000010485_01670;gene=thrS
contig_1	Pyrodigal	CDS	1697176	1699104	.	-	0	ID=GCA000010485_01670;Name=threonine--tRNA ligase;locus_tag=GCA000010485_01670;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0005829,GO:0006435,GO:0046872;gene=thrS;Parent=GCA000010485_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_001144199.1,SO:0001217,UniParc:UPI0001C22E24,UniRef:UniRef100_A0A037Y430,UniRef:UniRef50_P0A8M3,UniRef:UniRef90_P0A8M3;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1699628	1699915	.	+	.	ID=GCA000010485_01671_gene;locus_tag=GCA000010485_01671
contig_1	Pyrodigal	CDS	1699628	1699915	.	+	0	ID=GCA000010485_01671;Name=Ankyrin repeat regulatory protein;locus_tag=GCA000010485_01671;product=Ankyrin repeat regulatory protein;Parent=GCA000010485_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22E25,UniRef:UniRef100_A0AA36KXY7,UniRef:UniRef50_A0AA36KXY7,UniRef:UniRef90_A0AA36KXY7
contig_1	Pyrodigal	gene	1700823	1700930	.	+	.	ID=GCA000010485_01672_gene;locus_tag=GCA000010485_01672;gene=yniD
contig_1	Pyrodigal	CDS	1700823	1700930	.	+	0	ID=GCA000010485_01672;Name=small membrane protein YniD;locus_tag=GCA000010485_01672;product=small membrane protein YniD;Dbxref=GO:0005886;gene=yniD;Parent=GCA000010485_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001142445.1,SO:0001217,UniParc:UPI0000DACA7F,UniRef:UniRef100_Q2EES1,UniRef:UniRef50_Q2EES1,UniRef:UniRef90_Q2EES1
contig_1	Pyrodigal	gene	1700983	1701741	.	-	.	ID=GCA000010485_01673_gene;locus_tag=GCA000010485_01673;gene=ydiY
contig_1	Pyrodigal	CDS	1700983	1701741	.	-	0	ID=GCA000010485_01673;Name=putative protein YdiY;locus_tag=GCA000010485_01673;product=putative protein YdiY;Dbxref=GO:0009279;gene=ydiY;Parent=GCA000010485_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000771396.1,SO:0001217,UniParc:UPI000000E1E3,UniRef:UniRef100_C3T7N7,UniRef:UniRef50_P76206,UniRef:UniRef90_P76206
contig_1	Pyrodigal	gene	1702027	1702956	.	+	.	ID=GCA000010485_01674_gene;locus_tag=GCA000010485_01674;gene=pfkB
contig_1	Pyrodigal	CDS	1702027	1702956	.	+	0	ID=GCA000010485_01674;Name=6-phosphofructokinase II;locus_tag=GCA000010485_01674;product=6-phosphofructokinase II;Dbxref=GO:0005975,GO:0016773;gene=pfkB;Parent=GCA000010485_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16370,RefSeq:WP_000251758.1,SO:0001217,UniParc:UPI0001C22E27,UniRef:UniRef100_A0A061KZW9,UniRef:UniRef50_P06999,UniRef:UniRef90_Q8ZPT5;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	1703057	1703347	.	+	.	ID=GCA000010485_01675_gene;locus_tag=GCA000010485_01675;gene=ghoS
contig_1	Pyrodigal	CDS	1703057	1703347	.	+	0	ID=GCA000010485_01675;Name=Endoribonuclease GhoS;locus_tag=GCA000010485_01675;product=Endoribonuclease GhoS;gene=ghoS;Parent=GCA000010485_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000146146.1,SO:0001217,UniParc:UPI00000DEC2D,UniRef:UniRef100_A0A061K2M9,UniRef:UniRef50_P64479,UniRef:UniRef90_A0A3K2UWE2
contig_1	Pyrodigal	gene	1703453	1704313	.	+	.	ID=GCA000010485_01676_gene;locus_tag=GCA000010485_01676;gene=yniA
contig_1	Pyrodigal	CDS	1703453	1704313	.	+	0	ID=GCA000010485_01676;Name=putative ketoamine kinase YniA;locus_tag=GCA000010485_01676;product=putative ketoamine kinase YniA;Dbxref=GO:0005524,GO:0016301;gene=yniA;Parent=GCA000010485_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3001,COG:G,RefSeq:WP_000267670.1,SO:0001217,UniParc:UPI00000DEC2E,UniRef:UniRef100_E2QMT4,UniRef:UniRef50_P77739,UniRef:UniRef90_P77739;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	1704354	1704890	.	-	.	ID=GCA000010485_01677_gene;locus_tag=GCA000010485_01677;gene=yniB
contig_1	Pyrodigal	CDS	1704354	1704890	.	-	0	ID=GCA000010485_01677;Name=putative protein YniB;locus_tag=GCA000010485_01677;product=putative protein YniB;Dbxref=GO:0005886;gene=yniB;Parent=GCA000010485_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000222172.1,SO:0001217,UniParc:UPI00005AA690,UniRef:UniRef100_J7R1P9,UniRef:UniRef50_Q56956,UniRef:UniRef90_P76208
contig_1	Pyrodigal	gene	1705037	1705705	.	+	.	ID=GCA000010485_01678_gene;locus_tag=GCA000010485_01678;gene=hxpB
contig_1	Pyrodigal	CDS	1705037	1705705	.	+	0	ID=GCA000010485_01678;Name=hexitol phosphatase HxpB;locus_tag=GCA000010485_01678;product=hexitol phosphatase HxpB;Dbxref=GO:0000287,GO:0003850,GO:0004346,GO:0005829,GO:0016791,GO:0046872,GO:0050084,GO:0050286,GO:0050308;gene=hxpB;Parent=GCA000010485_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000106821.1,SO:0001217,UniParc:UPI00000DEC30,UniRef:UniRef100_A0A067HGC7,UniRef:UniRef50_P77247,UniRef:UniRef90_P77247;ec_number=3.1.3.68
contig_1	Pyrodigal	gene	1705869	1706459	.	+	.	ID=GCA000010485_01679_gene;locus_tag=GCA000010485_01679;gene=ybcI
contig_1	Pyrodigal	CDS	1705869	1706459	.	+	0	ID=GCA000010485_01679;Name=metal-dependent hydrolase;locus_tag=GCA000010485_01679;product=metal-dependent hydrolase;gene=ybcI;Parent=GCA000010485_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_001295408.1,SO:0001217,UniParc:UPI000022641B,UniRef:UniRef100_C3T7K7,UniRef:UniRef50_P64481,UniRef:UniRef90_C3T7K7
contig_1	Pyrodigal	gene	1706592	1707983	.	+	.	ID=GCA000010485_01680_gene;locus_tag=GCA000010485_01680;gene=tcyP
contig_1	Pyrodigal	CDS	1706592	1707983	.	+	0	ID=GCA000010485_01680;Name=cystine/sulfocysteine:cation symporter;locus_tag=GCA000010485_01680;product=cystine/sulfocysteine:cation symporter;Dbxref=GO:0000099,GO:0000101,GO:0005886,GO:0006791,GO:0015184,GO:0015293,GO:0015811;gene=tcyP;Parent=GCA000010485_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001010696,COG:COG1823,COG:E,RefSeq:WP_001010714.1,SO:0001217,UniParc:UPI00000DEC31,UniRef:UniRef100_E2QMT8,UniRef:UniRef50_P77529,UniRef:UniRef90_P77529
contig_1	Pyrodigal	gene	1708030	1708293	.	-	.	ID=GCA000010485_01681_gene;locus_tag=GCA000010485_01681;gene=cedA
contig_1	Pyrodigal	CDS	1708030	1708293	.	-	0	ID=GCA000010485_01681;Name=cell division activator CedA;locus_tag=GCA000010485_01681;product=cell division activator CedA;Dbxref=GO:0003677,GO:0051301;gene=cedA;Parent=GCA000010485_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15722,RefSeq:WP_001241562.1,SO:0001217,UniParc:UPI00000DEC32,UniRef:UniRef100_A1ABR2,UniRef:UniRef50_P0AE60,UniRef:UniRef90_P0AE60
contig_1	Pyrodigal	gene	1708476	1710737	.	+	.	ID=GCA000010485_01682_gene;locus_tag=GCA000010485_01682;gene=katE
contig_1	Pyrodigal	CDS	1708476	1710737	.	+	0	ID=GCA000010485_01682;Name=catalase HPII;locus_tag=GCA000010485_01682;product=catalase HPII;Dbxref=GO:0004096,GO:0005506,GO:0005737,GO:0005829,GO:0006972,GO:0006974,GO:0006979,GO:0020037,GO:0042744,GO:0042802;gene=katE;Parent=GCA000010485_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03781,RefSeq:WP_000077883.1,SO:0001217,UniParc:UPI0001C22E53,UniRef:UniRef100_A0A0C5EFZ8,UniRef:UniRef50_P21179,UniRef:UniRef90_P21179;ec_number=1.11.1.6
contig_1	Pyrodigal	gene	1710784	1711542	.	-	.	ID=GCA000010485_01683_gene;locus_tag=GCA000010485_01683;gene=chbG
contig_1	Pyrodigal	CDS	1710784	1711542	.	-	0	ID=GCA000010485_01683;Name=chitin disaccharide deacetylase;locus_tag=GCA000010485_01683;product=chitin disaccharide deacetylase;Dbxref=GO:0000272,GO:0005737,GO:0006032,GO:0016811,GO:0019213,GO:0036311,GO:0046872,GO:0052777;gene=chbG;Parent=GCA000010485_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03478,RefSeq:WP_000440433.1,SO:0001217,UniParc:UPI0001C22E54,UniRef:UniRef100_A0A061KZ70,UniRef:UniRef50_P37794,UniRef:UniRef90_P37794;ec_number=3.5.1.105
contig_1	Pyrodigal	gene	1711555	1712907	.	-	.	ID=GCA000010485_01684_gene;locus_tag=GCA000010485_01684;gene=chbF
contig_1	Pyrodigal	CDS	1711555	1712907	.	-	0	ID=GCA000010485_01684;Name=6-phospho-beta-glucosidase;locus_tag=GCA000010485_01684;product=6-phospho-beta-glucosidase;Dbxref=GO:0005975,GO:0008706,GO:0016616,GO:0042802,GO:0046872,GO:0052777;gene=chbF;Parent=GCA000010485_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000078765,BlastRules:WP_000145757,KEGG:K01222,RefSeq:WP_000078748.1,SO:0001217,UniParc:UPI00000D02CF,UniRef:UniRef100_C3T7H7,UniRef:UniRef50_P17411,UniRef:UniRef90_P17411;ec_number=3.2.1.86
contig_1	Pyrodigal	gene	1713010	1713849	.	-	.	ID=GCA000010485_01685_gene;locus_tag=GCA000010485_01685;gene=chbR
contig_1	Pyrodigal	CDS	1713010	1713849	.	-	0	ID=GCA000010485_01685;Name=transcriptional regulator ChbR;locus_tag=GCA000010485_01685;product=transcriptional regulator ChbR;Dbxref=GO:0001046,GO:0003700,GO:0006355,GO:0042803,GO:0045892;gene=chbR;Parent=GCA000010485_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03490,SO:0001217,UniParc:UPI0000DACE73,UniRef:UniRef100_A0A1V2FEK5,UniRef:UniRef50_P17410,UniRef:UniRef90_P17410
contig_1	Pyrodigal	gene	1713860	1714210	.	-	.	ID=GCA000010485_01686_gene;locus_tag=GCA000010485_01686;gene=chbA
contig_1	Pyrodigal	CDS	1713860	1714210	.	-	0	ID=GCA000010485_01686;Name=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;locus_tag=GCA000010485_01686;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;Dbxref=GO:0005737,GO:0009401,GO:0016740;gene=chbA;Parent=GCA000010485_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000968919.1,SO:0001217,UniParc:UPI00001328BA,UniRef:UniRef100_P69791,UniRef:UniRef50_P69791,UniRef:UniRef90_P69791;ec_number=2.7.1.196
contig_1	Pyrodigal	gene	1714261	1715619	.	-	.	ID=GCA000010485_01687_gene;locus_tag=GCA000010485_01687;gene=chbC
contig_1	Pyrodigal	CDS	1714261	1715619	.	-	0	ID=GCA000010485_01687;Name=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;locus_tag=GCA000010485_01687;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016020,GO:1902495,GO:1902815;gene=chbC;Parent=GCA000010485_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1455,COG:G,KEGG:K02761,RefSeq:WP_000073030.1,SO:0001217,UniParc:UPI00000DEC38,UniRef:UniRef100_A0A061YI85,UniRef:UniRef50_P17334,UniRef:UniRef90_P17334;ec_number=2.7.1.196
contig_1	Pyrodigal	gene	1715704	1716024	.	-	.	ID=GCA000010485_01688_gene;locus_tag=GCA000010485_01688;gene=chbB
contig_1	Pyrodigal	CDS	1715704	1716024	.	-	0	ID=GCA000010485_01688;Name=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;locus_tag=GCA000010485_01688;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;Dbxref=GO:0005829,GO:0008982,GO:0009401,GO:0016301,GO:0090566,GO:1902495,GO:1902815;gene=chbB;Parent=GCA000010485_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000412169,RefSeq:WP_000412169.1,SO:0001217,UniParc:UPI00001328BE,UniRef:UniRef100_P69795,UniRef:UniRef50_P69795,UniRef:UniRef90_P69795;ec_number=2.7.1.196
contig_1	Pyrodigal	gene	1716323	1716661	.	-	.	ID=GCA000010485_01689_gene;locus_tag=GCA000010485_01689;gene=osmE
contig_1	Pyrodigal	CDS	1716323	1716661	.	-	0	ID=GCA000010485_01689;Name=osmotically-inducible lipoprotein OsmE;locus_tag=GCA000010485_01689;product=osmotically-inducible lipoprotein OsmE;Dbxref=GO:0019867;gene=osmE;Parent=GCA000010485_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04064,RefSeq:WP_001039046.1,SO:0001217,UniParc:UPI00000E4A0F,UniRef:UniRef100_E2QMU7,UniRef:UniRef50_P0ADB1,UniRef:UniRef90_A8AHD0
contig_1	Pyrodigal	gene	1716863	1717690	.	+	.	ID=GCA000010485_01690_gene;locus_tag=GCA000010485_01690;gene=nadE
contig_1	Pyrodigal	CDS	1716863	1717690	.	+	0	ID=GCA000010485_01690;Name=ammonia-dependent NAD(+) synthetase;locus_tag=GCA000010485_01690;product=ammonia-dependent NAD(+) synthetase;Dbxref=GO:0003952,GO:0004359,GO:0005524,GO:0005737,GO:0008795,GO:0009435,GO:0046872;gene=nadE;Parent=GCA000010485_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0171,COG:H,RefSeq:WP_000175016.1,SO:0001217,UniParc:UPI0001C22E55,UniRef:UniRef100_A0A066SZY4,UniRef:UniRef50_P18843,UniRef:UniRef90_P18843;ec_number=6.3.1.5
contig_1	Infernal	gene	1717770	1717812	.	+	.	ID=GCA000010485_01691_gene;locus_tag=GCA000010485_01691;gene=ES036
contig_1	Infernal	ncRNA	1717770	1717812	2e-05	+	.	ID=GCA000010485_01691;Name=ES036 (CssrF) sRNA;locus_tag=GCA000010485_01691;product=ES036 (CssrF) sRNA;Dbxref=RFAM:RF02751;Parent=GCA000010485_01691_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02751
contig_1	Pyrodigal	gene	1717920	1718807	.	+	.	ID=GCA000010485_01692_gene;locus_tag=GCA000010485_01692;gene=cho
contig_1	Pyrodigal	CDS	1717920	1718807	.	+	0	ID=GCA000010485_01692;Name=excinuclease Cho;locus_tag=GCA000010485_01692;product=excinuclease Cho;Dbxref=GO:0004518,GO:0006289,GO:0009380,GO:0009432;gene=cho;Parent=GCA000010485_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K05984,RefSeq:WP_000252401.1,SO:0001217,UniParc:UPI0001C22E56,UniRef:UniRef100_A0A061KVC6,UniRef:UniRef50_P76213,UniRef:UniRef90_P76213;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	1718767	1719342	.	-	.	ID=GCA000010485_01693_gene;locus_tag=GCA000010485_01693;gene=ves
contig_1	Pyrodigal	CDS	1718767	1719342	.	-	0	ID=GCA000010485_01693;Name=environmental stress-induced protein Ves;locus_tag=GCA000010485_01693;product=environmental stress-induced protein Ves;Dbxref=GO:0070417;gene=ves;Parent=GCA000010485_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000455604.1,SO:0001217,UniParc:UPI0000DACE75,UniRef:UniRef100_B7MAV3,UniRef:UniRef50_P76214,UniRef:UniRef90_P76214
contig_1	Pyrodigal	gene	1719545	1720030	.	-	.	ID=GCA000010485_01694_gene;locus_tag=GCA000010485_01694;gene=spy
contig_1	Pyrodigal	CDS	1719545	1720030	.	-	0	ID=GCA000010485_01694;Name=ATP-independent periplasmic protein-refolding chaperone Spy;locus_tag=GCA000010485_01694;product=ATP-independent periplasmic protein-refolding chaperone Spy;Dbxref=GO:0014070,GO:0030288,GO:0042597,GO:0042803,GO:0044183,GO:0051082,GO:0061077;gene=spy;Parent=GCA000010485_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3678,COG:O,RefSeq:WP_001228972.1,SO:0001217,UniParc:UPI00000E4A10,UniRef:UniRef100_E2QMV1,UniRef:UniRef50_P77754,UniRef:UniRef90_P77754
contig_1	Pyrodigal	gene	1720360	1721328	.	-	.	ID=GCA000010485_01695_gene;locus_tag=GCA000010485_01695;gene=astE
contig_1	Pyrodigal	CDS	1720360	1721328	.	-	0	ID=GCA000010485_01695;Name=succinylglutamate desuccinylase;locus_tag=GCA000010485_01695;product=succinylglutamate desuccinylase;Dbxref=GO:0006527,GO:0008270,GO:0009017,GO:0016788,GO:0019544,GO:0019545;gene=astE;Parent=GCA000010485_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05526,RefSeq:WP_000368514.1,SO:0001217,UniParc:UPI0001C22E57,UniRef:UniRef100_A0A066SW01,UniRef:UniRef50_P76215,UniRef:UniRef90_P76215;ec_number=3.5.1.96
contig_1	Pyrodigal	gene	1721321	1722664	.	-	.	ID=GCA000010485_01696_gene;locus_tag=GCA000010485_01696;gene=astB
contig_1	Pyrodigal	CDS	1721321	1722664	.	-	0	ID=GCA000010485_01696;Name=N-succinylarginine dihydrolase;locus_tag=GCA000010485_01696;product=N-succinylarginine dihydrolase;Dbxref=GO:0006527,GO:0009015,GO:0019544,GO:0019545;gene=astB;Parent=GCA000010485_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3724,COG:E,RefSeq:WP_000994985.1,SO:0001217,UniParc:UPI0001C22E58,UniRef:UniRef100_A0A061KX90,UniRef:UniRef50_P76216,UniRef:UniRef90_P76216;ec_number=3.5.3.23
contig_1	Pyrodigal	gene	1722661	1724139	.	-	.	ID=GCA000010485_01697_gene;locus_tag=GCA000010485_01697;gene=astD
contig_1	Pyrodigal	CDS	1722661	1724139	.	-	0	ID=GCA000010485_01697;Name=succinylglutamate-semialdehyde dehydrogenase;locus_tag=GCA000010485_01697;product=succinylglutamate-semialdehyde dehydrogenase;Dbxref=GO:0006527,GO:0019544,GO:0019545,GO:0043824;gene=astD;Parent=GCA000010485_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000177311.1,SO:0001217,UniParc:UPI0001C22E59,UniRef:UniRef100_A0A066T0N7,UniRef:UniRef50_P76217,UniRef:UniRef90_P76217;ec_number=1.2.1.71
contig_1	Pyrodigal	gene	1724136	1725170	.	-	.	ID=GCA000010485_01698_gene;locus_tag=GCA000010485_01698;gene=astA
contig_1	Pyrodigal	CDS	1724136	1725170	.	-	0	ID=GCA000010485_01698;Name=arginine N-succinyltransferase;locus_tag=GCA000010485_01698;product=arginine N-succinyltransferase;Dbxref=GO:0006527,GO:0008791,GO:0019544,GO:0019545;gene=astA;Parent=GCA000010485_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00673,RefSeq:WP_000989435.1,SO:0001217,UniParc:UPI0001C22E5A,UniRef:UniRef100_A0A066SSE2,UniRef:UniRef50_P0AE37,UniRef:UniRef90_P0AE37;ec_number=2.3.1.109
contig_1	Pyrodigal	gene	1725167	1726387	.	-	.	ID=GCA000010485_01699_gene;locus_tag=GCA000010485_01699;gene=astC
contig_1	Pyrodigal	CDS	1725167	1726387	.	-	0	ID=GCA000010485_01699;Name=succinylornithine/acetylornithine transaminase;locus_tag=GCA000010485_01699;product=succinylornithine/acetylornithine transaminase;Dbxref=GO:0006526,GO:0006593,GO:0019544,GO:0019545,GO:0030170,GO:0042802,GO:0043825;gene=astC;Parent=GCA000010485_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000081983,KEGG:K00840,RefSeq:WP_000082031.1,SO:0001217,UniParc:UPI0001C22E5B,UniRef:UniRef100_A0A066SS24,UniRef:UniRef50_P77581,UniRef:UniRef90_P77581;ec_number=2.6.1.81
contig_1	Pyrodigal	gene	1726833	1727639	.	+	.	ID=GCA000010485_01700_gene;locus_tag=GCA000010485_01700;gene=xthA
contig_1	Pyrodigal	CDS	1726833	1727639	.	+	0	ID=GCA000010485_01700;Name=exodeoxyribonuclease III;locus_tag=GCA000010485_01700;product=exodeoxyribonuclease III;Dbxref=GO:0003677,GO:0004519,GO:0006281,GO:0008311;gene=xthA;Parent=GCA000010485_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0708,COG:L,KEGG:K01142,RefSeq:WP_000673940.1,SO:0001217,UniParc:UPI0001C22E5C,UniRef:UniRef100_A0A066SZZ4,UniRef:UniRef50_A0A2X3IS78,UniRef:UniRef90_A0A0H2VA25;ec_number=3.1.11.2
contig_1	Pyrodigal	gene	1727806	1728516	.	+	.	ID=GCA000010485_01701_gene;locus_tag=GCA000010485_01701;gene=ydjX
contig_1	Pyrodigal	CDS	1727806	1728516	.	+	0	ID=GCA000010485_01701;Name=TVP38/TMEM64 family membrane protein YdjX;locus_tag=GCA000010485_01701;product=TVP38/TMEM64 family membrane protein YdjX;Dbxref=GO:0005886;gene=ydjX;Parent=GCA000010485_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296115.1,SO:0001217,UniParc:UPI00005EF754,UniRef:UniRef100_A0A066T0P0,UniRef:UniRef50_P76219,UniRef:UniRef90_P76219
contig_1	Pyrodigal	gene	1728521	1729198	.	+	.	ID=GCA000010485_01702_gene;locus_tag=GCA000010485_01702;gene=ydjY
contig_1	Pyrodigal	CDS	1728521	1729198	.	+	0	ID=GCA000010485_01702;Name=putative protein YdjY;locus_tag=GCA000010485_01702;product=putative protein YdjY;Dbxref=GO:0005829;gene=ydjY;Parent=GCA000010485_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000939207.1,SO:0001217,UniParc:UPI00005EF753,UniRef:UniRef100_A0A061LMG7,UniRef:UniRef50_P76220,UniRef:UniRef90_P76220
contig_1	Pyrodigal	gene	1729215	1729919	.	+	.	ID=GCA000010485_01703_gene;locus_tag=GCA000010485_01703;gene=ydjZ
contig_1	Pyrodigal	CDS	1729215	1729919	.	+	0	ID=GCA000010485_01703;Name=TVP38/TMEM64 family inner membrane protein YdjZ;locus_tag=GCA000010485_01703;product=TVP38/TMEM64 family inner membrane protein YdjZ;Dbxref=GO:0005886;gene=ydjZ;Parent=GCA000010485_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0398,COG:S,SO:0001217,UniParc:UPI0001E18CBE,UniRef:UniRef100_E2QMW0,UniRef:UniRef50_P76221,UniRef:UniRef90_P76221
contig_1	Pyrodigal	gene	1729919	1730467	.	+	.	ID=GCA000010485_01704_gene;locus_tag=GCA000010485_01704
contig_1	Pyrodigal	CDS	1729919	1730467	.	+	0	ID=GCA000010485_01704;Name=Carboxymuconolactone decarboxylase-like domain-containing protein;locus_tag=GCA000010485_01704;product=Carboxymuconolactone decarboxylase-like domain-containing protein;Parent=GCA000010485_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000524076.1,SO:0001217,UniParc:UPI00000DEC45,UniRef:UniRef100_E2QMW1,UniRef:UniRef50_A0A0H3GRX0,UniRef:UniRef90_C3T782
contig_1	Pyrodigal	gene	1730477	1731643	.	+	.	ID=GCA000010485_01705_gene;locus_tag=GCA000010485_01705;gene=ynjB
contig_1	Pyrodigal	CDS	1730477	1731643	.	+	0	ID=GCA000010485_01705;Name=Protein YnjB;locus_tag=GCA000010485_01705;product=Protein YnjB;Dbxref=GO:0016020,GO:0030288,GO:0055052,GO:0055085;gene=ynjB;Parent=GCA000010485_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001215365.1,SO:0001217,UniParc:UPI0001C22E5D,UniRef:UniRef100_A0A061KZT2,UniRef:UniRef50_P76223,UniRef:UniRef90_P76223
contig_1	Pyrodigal	gene	1731616	1733151	.	+	.	ID=GCA000010485_01706_gene;locus_tag=GCA000010485_01706;gene=ynjC
contig_1	Pyrodigal	CDS	1731616	1733151	.	+	0	ID=GCA000010485_01706;Name=ABC transporter permease protein YnjC;locus_tag=GCA000010485_01706;product=ABC transporter permease protein YnjC;gene=ynjC;Parent=GCA000010485_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000224937.1,SO:0001217,UniParc:UPI0001C22E5E,UniRef:UniRef100_A0A641E622,UniRef:UniRef50_P76224,UniRef:UniRef90_A0A0H2YZA7
contig_1	Pyrodigal	gene	1733151	1733804	.	+	.	ID=GCA000010485_01707_gene;locus_tag=GCA000010485_01707;gene=ynjD
contig_1	Pyrodigal	CDS	1733151	1733804	.	+	0	ID=GCA000010485_01707;Name=putative ABC transporter ATP-binding protein YnjD;locus_tag=GCA000010485_01707;product=putative ABC transporter ATP-binding protein YnjD;Dbxref=GO:0005524,GO:0016020,GO:0016887,GO:0043190,GO:0055052,GO:0055085;gene=ynjD;Parent=GCA000010485_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4136,COG:R,RefSeq:WP_001296116.1,SO:0001217,UniParc:UPI0001C22E5F,UniRef:UniRef100_A0A061YFV7,UniRef:UniRef50_P76909,UniRef:UniRef90_P76909
contig_1	Pyrodigal	gene	1733871	1735178	.	+	.	ID=GCA000010485_01708_gene;locus_tag=GCA000010485_01708;gene=ynjE
contig_1	Pyrodigal	CDS	1733871	1735178	.	+	0	ID=GCA000010485_01708;Name=thiosulfate sulfurtransferase YnjE;locus_tag=GCA000010485_01708;product=thiosulfate sulfurtransferase YnjE;Dbxref=GO:0004792,GO:0016783,GO:0042597;gene=ynjE;Parent=GCA000010485_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001350515,KEGG:K21028,RefSeq:WP_001296117.1,SO:0001217,UniParc:UPI000188649D,UniRef:UniRef100_A0A484X4A3,UniRef:UniRef50_P78067,UniRef:UniRef90_P78067;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	1735187	1735807	.	-	.	ID=GCA000010485_01709_gene;locus_tag=GCA000010485_01709;gene=ynjF
contig_1	Pyrodigal	CDS	1735187	1735807	.	-	0	ID=GCA000010485_01709;Name=Inner membrane protein YnjF;locus_tag=GCA000010485_01709;product=Inner membrane protein YnjF;Dbxref=GO:0005886,GO:0008654,GO:0016780;gene=ynjF;Parent=GCA000010485_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296118.1,SO:0001217,UniParc:UPI00016A1587,UniRef:UniRef100_A0A061YIA7,UniRef:UniRef50_P76226,UniRef:UniRef90_P76226
contig_1	Pyrodigal	gene	1735894	1736301	.	+	.	ID=GCA000010485_01710_gene;locus_tag=GCA000010485_01710;gene=nudG
contig_1	Pyrodigal	CDS	1735894	1736301	.	+	0	ID=GCA000010485_01710;Name=CTP pyrophosphohydrolase;locus_tag=GCA000010485_01710;product=CTP pyrophosphohydrolase;Dbxref=GO:0006281,GO:0008413,GO:0016787,GO:0035539,GO:0044715,GO:0044716,GO:0047840;gene=nudG;Parent=GCA000010485_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000781888,COG:COG1051,COG:F,KEGG:K08320,RefSeq:WP_000781871.1,SO:0001217,UniParc:UPI0001C22E60,UniRef:UniRef100_A0A066T003,UniRef:UniRef50_P77788,UniRef:UniRef90_P77788;ec_number=3.6.1.65
contig_1	Pyrodigal	gene	1736267	1736539	.	-	.	ID=GCA000010485_01711_gene;locus_tag=GCA000010485_01711;gene=ynjH
contig_1	Pyrodigal	CDS	1736267	1736539	.	-	0	ID=GCA000010485_01711;Name=putative protein YnjH;locus_tag=GCA000010485_01711;product=putative protein YnjH;gene=ynjH;Parent=GCA000010485_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000085248.1,SO:0001217,UniParc:UPI00000E4A13,UniRef:UniRef100_A0A066T0P4,UniRef:UniRef50_P76227,UniRef:UniRef90_P76227
contig_1	Pyrodigal	gene	1736775	1738118	.	+	.	ID=GCA000010485_01712_gene;locus_tag=GCA000010485_01712;gene=gdhA
contig_1	Pyrodigal	CDS	1736775	1738118	.	+	0	ID=GCA000010485_01712;Name=NADP-specific glutamate dehydrogenase;locus_tag=GCA000010485_01712;product=NADP-specific glutamate dehydrogenase;Dbxref=GO:0004354,GO:0005737,GO:0005829,GO:0006520,GO:0006536,GO:0006537,GO:0016639,GO:0042802,GO:0097216,GO:1990148;gene=gdhA;Parent=GCA000010485_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_000373044.1,SO:0001217,UniParc:UPI00000DEC4B,UniRef:UniRef100_E2QMW9,UniRef:UniRef50_P00370,UniRef:UniRef90_P00370;ec_number=1.4.1.4
contig_1	Pyrodigal	gene	1738195	1740150	.	-	.	ID=GCA000010485_01713_gene;locus_tag=GCA000010485_01713;gene=topB
contig_1	Pyrodigal	CDS	1738195	1740150	.	-	0	ID=GCA000010485_01713;Name=DNA topoisomerase III;locus_tag=GCA000010485_01713;product=DNA topoisomerase III;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0006265,GO:0006281,GO:0006310,GO:0043597;gene=topB;Parent=GCA000010485_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001140209,BlastRules:WP_001235800,COG:COG0550,COG:L,KEGG:K03169,RefSeq:WP_001235830.1,SO:0001217,UniParc:UPI0001C22E61,UniRef:UniRef100_A0A066SS40,UniRef:UniRef50_P14294,UniRef:UniRef90_P14294;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1740155	1741198	.	-	.	ID=GCA000010485_01714_gene;locus_tag=GCA000010485_01714;gene=selD
contig_1	Pyrodigal	CDS	1740155	1741198	.	-	0	ID=GCA000010485_01714;Name=selenide%2C water dikinase SelD;locus_tag=GCA000010485_01714;product=selenide%2C water dikinase SelD;Dbxref=GO:0000287,GO:0004756,GO:0005524,GO:0005737,GO:0016260;gene=selD;Parent=GCA000010485_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0709,COG:E,KEGG:K01008,RefSeq:WP_001298241.1,SO:0001217,UniParc:UPI000013582C,UniRef:UniRef100_P66794,UniRef:UniRef50_P16456,UniRef:UniRef90_Q8ZPV5;ec_number=2.7.9.3
contig_1	Pyrodigal	gene	1741315	1741866	.	-	.	ID=GCA000010485_01715_gene;locus_tag=GCA000010485_01715;gene=ydjA
contig_1	Pyrodigal	CDS	1741315	1741866	.	-	0	ID=GCA000010485_01715;Name=NAD(P)H nitroreductase;locus_tag=GCA000010485_01715;product=NAD(P)H nitroreductase;Dbxref=GO:0005829,GO:0010181,GO:0016491,GO:0042803;gene=ydjA;Parent=GCA000010485_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000339292.1,SO:0001217,UniParc:UPI00005EF749,UniRef:UniRef100_E2QMX2,UniRef:UniRef50_P0ACY1,UniRef:UniRef90_P0ACY1;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1742027	1743883	.	+	.	ID=GCA000010485_01716_gene;locus_tag=GCA000010485_01716;gene=sppA
contig_1	Pyrodigal	CDS	1742027	1743883	.	+	0	ID=GCA000010485_01716;Name=signal peptide peptidase SppA;locus_tag=GCA000010485_01716;product=signal peptide peptidase SppA;Dbxref=GO:0006465,GO:0008233;gene=sppA;Parent=GCA000010485_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04773,RefSeq:WP_001259838.1,SO:0001217,UniParc:UPI0001C22E62,UniRef:UniRef100_A0A061KX72,UniRef:UniRef50_P08395,UniRef:UniRef90_C3T717;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1743999	1744709	.	+	.	ID=GCA000010485_01717_gene;locus_tag=GCA000010485_01717
contig_1	Pyrodigal	CDS	1743999	1744709	.	+	0	ID=GCA000010485_01717;Name=SIMPL domain-containing protein;locus_tag=GCA000010485_01717;product=SIMPL domain-containing protein;Parent=GCA000010485_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09797,RefSeq:WP_001030438.1,SO:0001217,UniParc:UPI0001E8B5D6,UniRef:UniRef100_A0A061YFW5,UniRef:UniRef50_B7LQ25,UniRef:UniRef90_Q8XDW4
contig_1	Pyrodigal	gene	1744841	1745857	.	+	.	ID=GCA000010485_01718_gene;locus_tag=GCA000010485_01718;gene=ansA
contig_1	Pyrodigal	CDS	1744841	1745857	.	+	0	ID=GCA000010485_01718;Name=asparaginase;locus_tag=GCA000010485_01718;product=asparaginase;Dbxref=GO:0004067,GO:0005737,GO:0005829,GO:0006520,GO:0033345,GO:0042802,GO:0051289;gene=ansA;Parent=GCA000010485_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_001170176.1,SO:0001217,UniParc:UPI0001C22E8E,UniRef:UniRef100_A0A641E882,UniRef:UniRef50_P0A962,UniRef:UniRef90_P0A962;ec_number=3.5.1.1
contig_1	Pyrodigal	gene	1745868	1746509	.	+	.	ID=GCA000010485_01719_gene;locus_tag=GCA000010485_01719;gene=pncA
contig_1	Pyrodigal	CDS	1745868	1746509	.	+	0	ID=GCA000010485_01719;Name=bifunctional nicotinamidase/pyrazinamidase;locus_tag=GCA000010485_01719;product=bifunctional nicotinamidase/pyrazinamidase;Dbxref=GO:0005829,GO:0008936,GO:0016811,GO:0019365,GO:0046872;gene=pncA;Parent=GCA000010485_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,KEGG:K08281,RefSeq:WP_001135068.1,SO:0001217,UniParc:UPI0000DACE7D,UniRef:UniRef100_A0A067HI36,UniRef:UniRef50_P21369,UniRef:UniRef90_P21369;ec_number=3.5.1.19
contig_1	Pyrodigal	gene	1746602	1747960	.	-	.	ID=GCA000010485_01720_gene;locus_tag=GCA000010485_01720;gene=ydjE
contig_1	Pyrodigal	CDS	1746602	1747960	.	-	0	ID=GCA000010485_01720;Name=Inner membrane metabolite transport protein YdjE;locus_tag=GCA000010485_01720;product=Inner membrane metabolite transport protein YdjE;Dbxref=GO:0005886,GO:0022857;gene=ydjE;Parent=GCA000010485_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001524794.1,SO:0001217,UniParc:UPI0001C22E8F,UniRef:UniRef100_A0A066T012,UniRef:UniRef50_P38055,UniRef:UniRef90_P38055
contig_1	Pyrodigal	gene	1748078	1748836	.	-	.	ID=GCA000010485_01721_gene;locus_tag=GCA000010485_01721;gene=ydjF
contig_1	Pyrodigal	CDS	1748078	1748836	.	-	0	ID=GCA000010485_01721;Name=putative HTH-type transcriptional regulator YdjF;locus_tag=GCA000010485_01721;product=putative HTH-type transcriptional regulator YdjF;Dbxref=GO:0003677,GO:0003700;gene=ydjF;Parent=GCA000010485_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_000719085.1,SO:0001217,UniParc:UPI0001C22E90,UniRef:UniRef100_A0A7I0KPP6,UniRef:UniRef50_P77721,UniRef:UniRef90_P77721
contig_1	Pyrodigal	gene	1748973	1749953	.	-	.	ID=GCA000010485_01722_gene;locus_tag=GCA000010485_01722;gene=ydjG
contig_1	Pyrodigal	CDS	1748973	1749953	.	-	0	ID=GCA000010485_01722;Name=NADH-dependent methylglyoxal reductase;locus_tag=GCA000010485_01722;product=NADH-dependent methylglyoxal reductase;Dbxref=GO:0005829,GO:0019170;gene=ydjG;Parent=GCA000010485_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723710,KEGG:K18471,RefSeq:WP_000723697.1,SO:0001217,UniParc:UPI0001C22E91,UniRef:UniRef100_A0A3I1SD93,UniRef:UniRef50_P77256,UniRef:UniRef90_P77256;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	1749963	1750910	.	-	.	ID=GCA000010485_01723_gene;locus_tag=GCA000010485_01723;gene=ydjH
contig_1	Pyrodigal	CDS	1749963	1750910	.	-	0	ID=GCA000010485_01723;Name=putative sugar kinase YdjH;locus_tag=GCA000010485_01723;product=putative sugar kinase YdjH;Dbxref=GO:0005829,GO:0006974,GO:0008673,GO:0019200,GO:0019698,GO:0042803,GO:0042840;gene=ydjH;Parent=GCA000010485_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298227.1,SO:0001217,UniParc:UPI00005EF745,UniRef:UniRef100_A0A0D6IR56,UniRef:UniRef50_P77493,UniRef:UniRef90_P77493;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	1750915	1751751	.	-	.	ID=GCA000010485_01724_gene;locus_tag=GCA000010485_01724;gene=ydjI
contig_1	Pyrodigal	CDS	1750915	1751751	.	-	0	ID=GCA000010485_01724;Name=putative protein YdjI;locus_tag=GCA000010485_01724;product=putative protein YdjI;Dbxref=GO:0005829,GO:0005975,GO:0008270,GO:0009025,GO:0016832,GO:0042802,GO:0051289;gene=ydjI;Parent=GCA000010485_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_000878878.1,SO:0001217,UniParc:UPI0001C22E92,UniRef:UniRef100_A0A7I0KY90,UniRef:UniRef50_P77704,UniRef:UniRef90_P77704;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	1751772	1752815	.	-	.	ID=GCA000010485_01725_gene;locus_tag=GCA000010485_01725;gene=ydjJ
contig_1	Pyrodigal	CDS	1751772	1752815	.	-	0	ID=GCA000010485_01725;Name=putative zinc-type alcohol dehydrogenase-like protein YdjJ;locus_tag=GCA000010485_01725;product=putative zinc-type alcohol dehydrogenase-like protein YdjJ;Dbxref=GO:0008270,GO:0016616;gene=ydjJ;Parent=GCA000010485_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000798135.1,SO:0001217,UniParc:UPI0001C22E93,UniRef:UniRef100_A0A061YK57,UniRef:UniRef50_P77280,UniRef:UniRef90_P77280;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1752832	1754211	.	-	.	ID=GCA000010485_01726_gene;locus_tag=GCA000010485_01726;gene=ydjK
contig_1	Pyrodigal	CDS	1752832	1754211	.	-	0	ID=GCA000010485_01726;Name=Putative metabolite transport protein YdjK;locus_tag=GCA000010485_01726;product=Putative metabolite transport protein YdjK;Dbxref=GO:0005886,GO:0022857;gene=ydjK;Parent=GCA000010485_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_000435332.1,SO:0001217,UniParc:UPI0001C22E94,UniRef:UniRef100_A0A7I0KPM2,UniRef:UniRef50_P76230,UniRef:UniRef90_P76230
contig_1	Pyrodigal	gene	1754238	1755314	.	-	.	ID=GCA000010485_01727_gene;locus_tag=GCA000010485_01727;gene=ydjL
contig_1	Pyrodigal	CDS	1754238	1755314	.	-	0	ID=GCA000010485_01727;Name=putative zinc-type alcohol dehydrogenase-like protein YdjL;locus_tag=GCA000010485_01727;product=putative zinc-type alcohol dehydrogenase-like protein YdjL;Dbxref=GO:0008270,GO:0016491;gene=ydjL;Parent=GCA000010485_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000645210.1,SO:0001217,UniParc:UPI0001C22E95,UniRef:UniRef100_A0A061KV88,UniRef:UniRef50_P77539,UniRef:UniRef90_P77539;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1755684	1755956	.	-	.	ID=GCA000010485_01728_gene;locus_tag=GCA000010485_01728;gene=yeaC
contig_1	Pyrodigal	CDS	1755684	1755956	.	-	0	ID=GCA000010485_01728;Name=putative protein YeaC;locus_tag=GCA000010485_01728;product=putative protein YeaC;gene=yeaC;Parent=GCA000010485_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3139,COG:S,RefSeq:WP_001046792.1,SO:0001217,UniParc:UPI00005EF740,UniRef:UniRef100_E2QMY4,UniRef:UniRef50_P76231,UniRef:UniRef90_P76231
contig_1	Pyrodigal	gene	1755998	1756411	.	-	.	ID=GCA000010485_01729_gene;locus_tag=GCA000010485_01729;gene=msrB
contig_1	Pyrodigal	CDS	1755998	1756411	.	-	0	ID=GCA000010485_01729;Name=Peptide methionine sulfoxide reductase MsrB;locus_tag=GCA000010485_01729;product=Peptide methionine sulfoxide reductase MsrB;Dbxref=GO:0005737,GO:0006979,GO:0008270,GO:0030091,GO:0033743;gene=msrB;Parent=GCA000010485_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,RefSeq:WP_001284618.1,SO:0001217,UniParc:UPI000012F674,UniRef:UniRef100_P0A746,UniRef:UniRef50_P0A746,UniRef:UniRef90_P0A746;ec_number=1.8.4.12
contig_1	Pyrodigal	gene	1756753	1757748	.	+	.	ID=GCA000010485_01730_gene;locus_tag=GCA000010485_01730;gene=gapA
contig_1	Pyrodigal	CDS	1756753	1757748	.	+	0	ID=GCA000010485_01730;Name=glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000010485_01730;product=glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005829,GO:0006006,GO:0006096,GO:0016020,GO:0042802,GO:0050661,GO:0051287;gene=gapA;Parent=GCA000010485_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000153502.1,SO:0001217,UniParc:UPI0000165478,UniRef:UniRef100_P0A9B2,UniRef:UniRef50_P0A9B2,UniRef:UniRef90_P0A9B2;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1757832	1758716	.	+	.	ID=GCA000010485_01731_gene;locus_tag=GCA000010485_01731;gene=yeaD
contig_1	Pyrodigal	CDS	1757832	1758716	.	+	0	ID=GCA000010485_01731;Name=Putative glucose-6-phosphate 1-epimerase;locus_tag=GCA000010485_01731;product=Putative glucose-6-phosphate 1-epimerase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006974,GO:0030246,GO:0047938;gene=yeaD;Parent=GCA000010485_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0676,COG:G,RefSeq:WP_001296124.1,SO:0001217,UniParc:UPI00018872F0,UniRef:UniRef100_E2QMY7,UniRef:UniRef50_P39173,UniRef:UniRef90_P39173;ec_number=5.1.3.15
contig_1	Pyrodigal	gene	1758767	1759621	.	-	.	ID=GCA000010485_01732_gene;locus_tag=GCA000010485_01732;gene=yeaE
contig_1	Pyrodigal	CDS	1758767	1759621	.	-	0	ID=GCA000010485_01732;Name=methylglyoxal reductase YeaE;locus_tag=GCA000010485_01732;product=methylglyoxal reductase YeaE;Dbxref=GO:0016491,GO:0051596;gene=yeaE;Parent=GCA000010485_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001186371,RefSeq:WP_001296125.1,SO:0001217,UniParc:UPI0000DACE81,UniRef:UniRef100_A0A061KV83,UniRef:UniRef50_P76234,UniRef:UniRef90_P76234;ec_number=1.1.1.- 
contig_1	Pyrodigal	gene	1759711	1760457	.	-	.	ID=GCA000010485_01733_gene;locus_tag=GCA000010485_01733;gene=mipA
contig_1	Pyrodigal	CDS	1759711	1760457	.	-	0	ID=GCA000010485_01733;Name=scaffolding protein MipA;locus_tag=GCA000010485_01733;product=scaffolding protein MipA;Dbxref=GO:0009252,GO:0009279;gene=mipA;Parent=GCA000010485_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000163771,COG:COG3713,COG:M,RefSeq:WP_000163771.1,SO:0001217,UniParc:UPI000012F14C,UniRef:UniRef100_P0A908,UniRef:UniRef50_P0A908,UniRef:UniRef90_P0A908
contig_1	Pyrodigal	gene	1760893	1762827	.	+	.	ID=GCA000010485_01734_gene;locus_tag=GCA000010485_01734;gene=yeaG
contig_1	Pyrodigal	CDS	1760893	1762827	.	+	0	ID=GCA000010485_01734;Name=protein kinase YeaG;locus_tag=GCA000010485_01734;product=protein kinase YeaG;Dbxref=GO:0004672,GO:0006995;gene=yeaG;Parent=GCA000010485_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001019882,COG:COG2766,COG:T,KEGG:K07180,RefSeq:WP_001019882.1,SO:0001217,UniParc:UPI000013ABA4,UniRef:UniRef100_P0ACY3,UniRef:UniRef50_P0ACY3,UniRef:UniRef90_P0ACY3;ec_number=2.7.11.-
contig_1	Pyrodigal	gene	1762940	1764223	.	+	.	ID=GCA000010485_01735_gene;locus_tag=GCA000010485_01735;gene=yeaH
contig_1	Pyrodigal	CDS	1762940	1764223	.	+	0	ID=GCA000010485_01735;Name=UPF0229 protein YeaH;locus_tag=GCA000010485_01735;product=UPF0229 protein YeaH;gene=yeaH;Parent=GCA000010485_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2718,COG:R,KEGG:K09786,RefSeq:WP_000219684.1,SO:0001217,UniParc:UPI000013ABA6,UniRef:UniRef100_B7USG4,UniRef:UniRef50_P76235,UniRef:UniRef90_P76235
contig_1	Pyrodigal	gene	1764370	1765845	.	+	.	ID=GCA000010485_01736_gene;locus_tag=GCA000010485_01736;gene=cdgI
contig_1	Pyrodigal	CDS	1764370	1765845	.	+	0	ID=GCA000010485_01736;Name=putative diguanylate cyclase CdgI;locus_tag=GCA000010485_01736;product=putative diguanylate cyclase CdgI;Dbxref=GO:0005525,GO:0005886,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=cdgI;Parent=GCA000010485_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000621382.1,SO:0001217,UniParc:UPI0001C22E96,UniRef:UniRef100_A0A1U9TP22,UniRef:UniRef50_P76236,UniRef:UniRef90_P76236;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1766026	1767516	.	+	.	ID=GCA000010485_01737_gene;locus_tag=GCA000010485_01737;gene=dgcJ
contig_1	Pyrodigal	CDS	1766026	1767516	.	+	0	ID=GCA000010485_01737;Name=diguanylate cyclase DgcJ;locus_tag=GCA000010485_01737;product=diguanylate cyclase DgcJ;Dbxref=GO:0005525,GO:0005886,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcJ;Parent=GCA000010485_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296127.1,SO:0001217,UniParc:UPI0001C22E97,UniRef:UniRef100_A0A061KV76,UniRef:UniRef50_P76237,UniRef:UniRef90_P76237;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1767559	1768062	.	+	.	ID=GCA000010485_01738_gene;locus_tag=GCA000010485_01738;gene=yeaK
contig_1	Pyrodigal	CDS	1767559	1768062	.	+	0	ID=GCA000010485_01738;Name=mischarged aminoacyl-tRNA deacylase;locus_tag=GCA000010485_01738;product=mischarged aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0002161,GO:0002196,GO:0005737,GO:0045903,GO:0106074;gene=yeaK;Parent=GCA000010485_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000138043,COG:COG2606,COG:J,RefSeq:WP_000138051.1,SO:0001217,UniParc:UPI00005F05DF,UniRef:UniRef100_E2QMZ4,UniRef:UniRef50_P64483,UniRef:UniRef90_P64483;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	1768337	1768783	.	+	.	ID=GCA000010485_01739_gene;locus_tag=GCA000010485_01739;gene=yeaL
contig_1	Pyrodigal	CDS	1768337	1768783	.	+	0	ID=GCA000010485_01739;Name=UPF0756 membrane protein YeaL;locus_tag=GCA000010485_01739;product=UPF0756 membrane protein YeaL;Dbxref=GO:0005886;gene=yeaL;Parent=GCA000010485_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2707,COG:S,RefSeq:WP_000460707.1,SO:0001217,UniParc:UPI000013ABAC,UniRef:UniRef100_P0ACY6,UniRef:UniRef50_P0ACY6,UniRef:UniRef90_P0ACY6
contig_1	Pyrodigal	gene	1768740	1769558	.	-	.	ID=GCA000010485_01740_gene;locus_tag=GCA000010485_01740;gene=nimR
contig_1	Pyrodigal	CDS	1768740	1769558	.	-	0	ID=GCA000010485_01740;Name=DNA-binding transcriptional regulator NimR;locus_tag=GCA000010485_01740;product=DNA-binding transcriptional regulator NimR;gene=nimR;Parent=GCA000010485_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000972248,SO:0001217,UniRef:UniRef50_P76241
contig_1	Pyrodigal	gene	1769658	1770839	.	+	.	ID=GCA000010485_01741_gene;locus_tag=GCA000010485_01741;gene=nimT
contig_1	Pyrodigal	CDS	1769658	1770839	.	+	0	ID=GCA000010485_01741;Name=2-nitroimidazole transporter;locus_tag=GCA000010485_01741;product=2-nitroimidazole transporter;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=nimT;Parent=GCA000010485_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000128491,COG:COG2807,COG:P,RefSeq:WP_000128451.1,SO:0001217,UniParc:UPI0001C22E99,UniRef:UniRef100_A0A061YC34,UniRef:UniRef50_P76242,UniRef:UniRef90_P76242
contig_1	Pyrodigal	gene	1770894	1771241	.	+	.	ID=GCA000010485_01742_gene;locus_tag=GCA000010485_01742;gene=yeaO
contig_1	Pyrodigal	CDS	1770894	1771241	.	+	0	ID=GCA000010485_01742;Name=putative protein YeaO;locus_tag=GCA000010485_01742;product=putative protein YeaO;gene=yeaO;Parent=GCA000010485_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3189,COG:S,RefSeq:WP_001296129.1,SO:0001217,UniParc:UPI0001C22E9A,UniRef:UniRef100_A0A061YFY8,UniRef:UniRef50_P76243,UniRef:UniRef90_P76243
contig_1	Bakta	gene	1771244	1771309	.	-	.	ID=GCA000010485_01743_gene;locus_tag=GCA000010485_01743;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1771244	1771309	.	-	0	ID=GCA000010485_01743;Name=Transposase;locus_tag=GCA000010485_01743;product=Transposase;Parent=GCA000010485_01743_gene;Note=SO:0001217,UniParc:UPI000945FB12,UniRef:UniRef100_I6CVD2,UniRef:UniRef50_I6CVD2,UniRef:UniRef90_I6CVD2
contig_1	Pyrodigal	gene	1771263	1771517	.	-	.	ID=GCA000010485_01744_gene;locus_tag=GCA000010485_01744;gene=yoaF
contig_1	Pyrodigal	CDS	1771263	1771517	.	-	0	ID=GCA000010485_01744;Name=DUF333 domain-containing protein;locus_tag=GCA000010485_01744;product=DUF333 domain-containing protein;gene=yoaF;Parent=GCA000010485_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000691930,COG:COG3042,COG:R,KEGG:K09712,RefSeq:WP_000691930.1,SO:0001217,UniParc:UPI000013BC5C,UniRef:UniRef100_P64493,UniRef:UniRef50_P64493,UniRef:UniRef90_P64493
contig_1	Pyrodigal	gene	1771700	1772725	.	+	.	ID=GCA000010485_01745_gene;locus_tag=GCA000010485_01745;gene=dgcP
contig_1	Pyrodigal	CDS	1771700	1772725	.	+	0	ID=GCA000010485_01745;Name=diguanylate cyclase DgcP;locus_tag=GCA000010485_01745;product=diguanylate cyclase DgcP;Dbxref=GO:0005525,GO:0005886,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcP;Parent=GCA000010485_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001310896,COG:COG2203,COG:T,RefSeq:WP_001545992.1,SO:0001217,UniParc:UPI0002A250BE,UniRef:UniRef100_A0A7I0KPU4,UniRef:UniRef50_P76245,UniRef:UniRef90_P76245;ec_number=2.7.7.65
contig_1	Bakta	gene	1772859	1772933	.	+	.	ID=GCA000010485_01746_gene;locus_tag=GCA000010485_01746;inference=ab initio prediction:Bakta;gene=yoaJ
contig_1	Bakta	CDS	1772859	1772933	.	+	0	ID=GCA000010485_01746;Name=protein YoaJ;locus_tag=GCA000010485_01746;product=protein YoaJ;Dbxref=GO:0005886;gene=yoaJ;Parent=GCA000010485_01746_gene;Note=RefSeq:WP_001386836.1,SO:0001217,UniParc:UPI00016A10F4,UniRef:UniRef100_C1P603,UniRef:UniRef50_C1P603,UniRef:UniRef90_C1P603
contig_1	Pyrodigal	gene	1772992	1773240	.	-	.	ID=GCA000010485_01747_gene;locus_tag=GCA000010485_01747;gene=yeaQ
contig_1	Pyrodigal	CDS	1772992	1773240	.	-	0	ID=GCA000010485_01747;Name=UPF0410 protein YeaQ;locus_tag=GCA000010485_01747;product=UPF0410 protein YeaQ;Dbxref=GO:0005886;gene=yeaQ;Parent=GCA000010485_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2261,COG:R,RefSeq:WP_000512153.1,SO:0001217,UniParc:UPI0000047C75,UniRef:UniRef100_P64485,UniRef:UniRef50_P64485,UniRef:UniRef90_P64485
contig_1	Pyrodigal	gene	1773388	1773570	.	-	.	ID=GCA000010485_01748_gene;locus_tag=GCA000010485_01748;gene=yoaG
contig_1	Pyrodigal	CDS	1773388	1773570	.	-	0	ID=GCA000010485_01748;Name=Protein YoaG;locus_tag=GCA000010485_01748;product=Protein YoaG;gene=yoaG;Parent=GCA000010485_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000513737.1,SO:0001217,UniParc:UPI0000047C76,UniRef:UniRef100_P64496,UniRef:UniRef50_P64496,UniRef:UniRef90_P64496
contig_1	Pyrodigal	gene	1773574	1773933	.	-	.	ID=GCA000010485_01749_gene;locus_tag=GCA000010485_01749;gene=yeaR
contig_1	Pyrodigal	CDS	1773574	1773933	.	-	0	ID=GCA000010485_01749;Name=putative protein YeaR;locus_tag=GCA000010485_01749;product=putative protein YeaR;gene=yeaR;Parent=GCA000010485_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3615,COG:P,RefSeq:WP_000939308.1,SO:0001217,UniParc:UPI0001C22E9C,UniRef:UniRef100_A0A7I0KPV5,UniRef:UniRef50_P64488,UniRef:UniRef90_P64488
contig_1	Pyrodigal	gene	1774106	1774744	.	-	.	ID=GCA000010485_01750_gene;locus_tag=GCA000010485_01750;gene=leuE
contig_1	Pyrodigal	CDS	1774106	1774744	.	-	0	ID=GCA000010485_01750;Name=leucine efflux protein LeuE;locus_tag=GCA000010485_01750;product=leucine efflux protein LeuE;Dbxref=GO:0005886,GO:0006865,GO:0015190,GO:0015297,GO:0015820;gene=leuE;Parent=GCA000010485_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1280,COG:E,KEGG:K11250,RefSeq:WP_000457207.1,SO:0001217,UniParc:UPI00005E32CC,UniRef:UniRef100_Q32FT6,UniRef:UniRef50_P76249,UniRef:UniRef90_P76249
contig_1	Pyrodigal	gene	1775287	1776402	.	-	.	ID=GCA000010485_01751_gene;locus_tag=GCA000010485_01751;gene=rnd
contig_1	Pyrodigal	CDS	1775287	1776402	.	-	0	ID=GCA000010485_01751;Name=ribonuclease D;locus_tag=GCA000010485_01751;product=ribonuclease D;Dbxref=GO:0000166,GO:0000175,GO:0003676,GO:0005737,GO:0008033,GO:0008408,GO:0033890,GO:0042780;gene=rnd;Parent=GCA000010485_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0349,COG:J,KEGG:K03684,RefSeq:WP_001545994.1,SO:0001217,UniParc:UPI0002A1F5C8,UniRef:UniRef100_A0A6D0HNU7,UniRef:UniRef50_P09155,UniRef:UniRef90_P09155;ec_number=3.1.13.5
contig_1	Infernal	gene	1776440	1776525	.	-	.	ID=GCA000010485_01752_gene;locus_tag=GCA000010485_01752;gene=sroD
contig_1	Infernal	ncRNA	1776440	1776525	3.3e-20	-	.	ID=GCA000010485_01752;Name=sroD RNA;locus_tag=GCA000010485_01752;gene=sroD;product=sroD RNA;Dbxref=RFAM:RF00370;Parent=GCA000010485_01752_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00370
contig_1	Pyrodigal	gene	1776484	1778235	.	-	.	ID=GCA000010485_01753_gene;locus_tag=GCA000010485_01753;gene=fadD
contig_1	Pyrodigal	CDS	1776484	1778235	.	-	0	ID=GCA000010485_01753;Name=long-chain-fatty-acid--CoA ligase FadD;locus_tag=GCA000010485_01753;product=long-chain-fatty-acid--CoA ligase FadD;Dbxref=GO:0004467,GO:0005524,GO:0006635,GO:0016020;gene=fadD;Parent=GCA000010485_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,SO:0001217,UniParc:UPI000176C202,UniRef:UniRef100_F4SZ33,UniRef:UniRef50_P69451,UniRef:UniRef90_P69451;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	1778374	1778955	.	-	.	ID=GCA000010485_01754_gene;locus_tag=GCA000010485_01754;gene=yeaY
contig_1	Pyrodigal	CDS	1778374	1778955	.	-	0	ID=GCA000010485_01754;Name=Slp family lipoprotein YeaY;locus_tag=GCA000010485_01754;product=Slp family lipoprotein YeaY;Dbxref=GO:0005886,GO:0019867;gene=yeaY;Parent=GCA000010485_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000290576,COG:COG3065,COG:M,RefSeq:WP_000290576.1,SO:0001217,UniParc:UPI000013ABB6,UniRef:UniRef100_P0AA91,UniRef:UniRef50_P0AA91,UniRef:UniRef90_P0AA91
contig_1	Pyrodigal	gene	1778995	1779690	.	-	.	ID=GCA000010485_01755_gene;locus_tag=GCA000010485_01755;gene=tsaB
contig_1	Pyrodigal	CDS	1778995	1779690	.	-	0	ID=GCA000010485_01755;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000010485_01755;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0000408,GO:0002949,GO:0005829,GO:0008237,GO:0042802,GO:1990145;gene=tsaB;Parent=GCA000010485_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_001221004.1,SO:0001217,UniParc:UPI0001C22E9E,UniRef:UniRef100_A0A7I0KPV2,UniRef:UniRef50_P76256,UniRef:UniRef90_P76256;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	1779748	1781658	.	-	.	ID=GCA000010485_01756_gene;locus_tag=GCA000010485_01756;gene=yoaA
contig_1	Pyrodigal	CDS	1779748	1781658	.	-	0	ID=GCA000010485_01756;Name=ATP-dependent DNA helicase YoaA;locus_tag=GCA000010485_01756;product=ATP-dependent DNA helicase YoaA;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0004386,GO:0005524,GO:0006281,GO:0009378,GO:0009432,GO:0016853,GO:0016887,GO:0036121,GO:0043139,GO:0046872,GO:0051536,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=yoaA;Parent=GCA000010485_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1199,COG:L,RefSeq:WP_000128875.1,SO:0001217,UniParc:UPI0001C22E9F,UniRef:UniRef100_A0A3K0JTF4,UniRef:UniRef50_P76257,UniRef:UniRef90_P76257;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	1781787	1782134	.	+	.	ID=GCA000010485_01757_gene;locus_tag=GCA000010485_01757;gene=yoaB
contig_1	Pyrodigal	CDS	1781787	1782134	.	+	0	ID=GCA000010485_01757;Name=RutC family protein YoaB;locus_tag=GCA000010485_01757;product=RutC family protein YoaB;Dbxref=GO:0005829,GO:0044010;gene=yoaB;Parent=GCA000010485_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_001310311.1,SO:0001217,UniParc:UPI000016EFDD,UniRef:UniRef100_P0AEB7,UniRef:UniRef50_P0AEB7,UniRef:UniRef90_P0AEB7
contig_1	Pyrodigal	gene	1782556	1782855	.	+	.	ID=GCA000010485_01758_gene;locus_tag=GCA000010485_01758
contig_1	Pyrodigal	CDS	1782556	1782855	.	+	0	ID=GCA000010485_01758;Name=DUF1889 domain-containing protein;locus_tag=GCA000010485_01758;product=DUF1889 domain-containing protein;Parent=GCA000010485_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001111990.1,SO:0001217,UniParc:UPI00005AA65D,UniRef:UniRef100_A0A1U9TNZ1,UniRef:UniRef50_P64490,UniRef:UniRef90_A0A3T2V224
contig_1	Pyrodigal	gene	1782975	1783154	.	-	.	ID=GCA000010485_01759_gene;locus_tag=GCA000010485_01759;gene=yoaH
contig_1	Pyrodigal	CDS	1782975	1783154	.	-	0	ID=GCA000010485_01759;Name=YoaH family protein;locus_tag=GCA000010485_01759;product=YoaH family protein;gene=yoaH;Parent=GCA000010485_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3140,COG:S,KEGG:K09917,RefSeq:WP_000457334.1,SO:0001217,UniParc:UPI000013BC5D,UniRef:UniRef100_P67338,UniRef:UniRef50_P67338,UniRef:UniRef90_P67338
contig_1	Pyrodigal	gene	1783228	1784589	.	+	.	ID=GCA000010485_01760_gene;locus_tag=GCA000010485_01760;gene=pabB
contig_1	Pyrodigal	CDS	1783228	1784589	.	+	0	ID=GCA000010485_01760;Name=aminodeoxychorismate synthase component 1;locus_tag=GCA000010485_01760;product=aminodeoxychorismate synthase component 1;Dbxref=GO:0000162,GO:0000287,GO:0008153,GO:0009356,GO:0009396,GO:0046654,GO:0046656,GO:0046820,GO:0046982,GO:0120284;gene=pabB;Parent=GCA000010485_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_000855004.1,SO:0001217,UniParc:UPI0001C22B29,UniRef:UniRef100_A0A7I0KPW5,UniRef:UniRef50_P05041,UniRef:UniRef90_P05041;ec_number=2.6.1.85
contig_1	Pyrodigal	gene	1784593	1785171	.	+	.	ID=GCA000010485_01761_gene;locus_tag=GCA000010485_01761;gene=nudL
contig_1	Pyrodigal	CDS	1784593	1785171	.	+	0	ID=GCA000010485_01761;Name=CoA pyrophosphatase;locus_tag=GCA000010485_01761;product=CoA pyrophosphatase;Dbxref=GO:0000287,GO:0009132,GO:0010945,GO:0030145;gene=nudL;Parent=GCA000010485_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000456725.1,SO:0001217,UniParc:UPI00000D044B,UniRef:UniRef100_B7USI8,UniRef:UniRef50_P43337,UniRef:UniRef90_P43337;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1785355	1786719	.	+	.	ID=GCA000010485_01762_gene;locus_tag=GCA000010485_01762;gene=sdaA
contig_1	Pyrodigal	CDS	1785355	1786719	.	+	0	ID=GCA000010485_01762;Name=L-serine ammonia-lyase;locus_tag=GCA000010485_01762;product=L-serine ammonia-lyase;Dbxref=GO:0003941,GO:0005829,GO:0006094,GO:0006565,GO:0046872,GO:0051539;gene=sdaA;Parent=GCA000010485_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000624295.1,SO:0001217,UniParc:UPI00000DEC73,UniRef:UniRef100_A0A061YK92,UniRef:UniRef50_P16095,UniRef:UniRef90_P16095;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	1786850	1788448	.	+	.	ID=GCA000010485_01763_gene;locus_tag=GCA000010485_01763;gene=pdeD
contig_1	Pyrodigal	CDS	1786850	1788448	.	+	0	ID=GCA000010485_01763;Name=putative cyclic di-GMP phosphodiesterase PdeD;locus_tag=GCA000010485_01763;product=putative cyclic di-GMP phosphodiesterase PdeD;Dbxref=GO:0005886,GO:0006974,GO:0071111;gene=pdeD;Parent=GCA000010485_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21090,RefSeq:WP_001337803.1,SO:0001217,UniParc:UPI000188730D,UniRef:UniRef100_A0A0G9FPP8,UniRef:UniRef50_P76261,UniRef:UniRef90_P76261;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	1788452	1790008	.	-	.	ID=GCA000010485_01764_gene;locus_tag=GCA000010485_01764;gene=yoaE
contig_1	Pyrodigal	CDS	1788452	1790008	.	-	0	ID=GCA000010485_01764;Name=CNNM family cation transport protein YoaE;locus_tag=GCA000010485_01764;product=CNNM family cation transport protein YoaE;Dbxref=GO:0005886,GO:0050660;gene=yoaE;Parent=GCA000010485_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000421815,RefSeq:WP_000394983.1,SO:0001217,UniParc:UPI000013BC5B,UniRef:UniRef100_P0AEC0,UniRef:UniRef50_P0AEC0,UniRef:UniRef90_P0AEC0
contig_1	Pyrodigal	gene	1790472	1791443	.	+	.	ID=GCA000010485_01765_gene;locus_tag=GCA000010485_01765;gene=manX
contig_1	Pyrodigal	CDS	1790472	1791443	.	+	0	ID=GCA000010485_01765;Name=PTS mannose transporter subunit IIAB;locus_tag=GCA000010485_01765;product=PTS mannose transporter subunit IIAB;Dbxref=GO:0005737,GO:0005886,GO:0008982,GO:0009401,GO:0016301;gene=manX;Parent=GCA000010485_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3444,COG:G,KEGG:K02794,RefSeq:WP_000150538.1,SO:0001217,UniParc:UPI00005EF72E,UniRef:UniRef100_E2QN19,UniRef:UniRef50_P69797,UniRef:UniRef90_P69797;ec_number=2.7.1.191
contig_1	Pyrodigal	gene	1791506	1792306	.	+	.	ID=GCA000010485_01766_gene;locus_tag=GCA000010485_01766;gene=manY
contig_1	Pyrodigal	CDS	1791506	1792306	.	+	0	ID=GCA000010485_01766;Name=PTS mannose transporter subunit IIC;locus_tag=GCA000010485_01766;product=PTS mannose transporter subunit IIC;Dbxref=GO:0005886,GO:0009401;gene=manY;Parent=GCA000010485_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000406926,COG:COG3715,COG:G,RefSeq:WP_000406926.1,SO:0001217,UniParc:UPI0000132970,UniRef:UniRef100_P69801,UniRef:UniRef50_P69801,UniRef:UniRef90_P69801;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	1792319	1793170	.	+	.	ID=GCA000010485_01767_gene;locus_tag=GCA000010485_01767;gene=manZ
contig_1	Pyrodigal	CDS	1792319	1793170	.	+	0	ID=GCA000010485_01767;Name=PTS mannose transporter subunit IID;locus_tag=GCA000010485_01767;product=PTS mannose transporter subunit IID;Dbxref=GO:0005886,GO:0009401,GO:0015761,GO:0015764,GO:0016020,GO:0022870,GO:0098708,GO:1902495,GO:1990539;gene=manZ;Parent=GCA000010485_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000228655,COG:COG3716,COG:G,RefSeq:WP_000228655.1,SO:0001217,UniParc:UPI00001B5115,UniRef:UniRef100_P69805,UniRef:UniRef50_P69805,UniRef:UniRef90_P69805;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	1793225	1793683	.	+	.	ID=GCA000010485_01768_gene;locus_tag=GCA000010485_01768;gene=yobD
contig_1	Pyrodigal	CDS	1793225	1793683	.	+	0	ID=GCA000010485_01768;Name=DUF986 domain-containing protein;locus_tag=GCA000010485_01768;product=DUF986 domain-containing protein;Dbxref=GO:0005886;gene=yobD;Parent=GCA000010485_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4811,COG:S,RefSeq:WP_000156255.1,SO:0001217,UniParc:UPI000013BC62,UniRef:UniRef100_P67601,UniRef:UniRef50_P67601,UniRef:UniRef90_P67601
contig_1	Pyrodigal	gene	1794112	1794678	.	+	.	ID=GCA000010485_01769_gene;locus_tag=GCA000010485_01769;gene=mntP
contig_1	Pyrodigal	CDS	1794112	1794678	.	+	0	ID=GCA000010485_01769;Name=manganese efflux pump MntP;locus_tag=GCA000010485_01769;product=manganese efflux pump MntP;Dbxref=GO:0005384,GO:0005886;gene=mntP;Parent=GCA000010485_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1971,COG:P,KEGG:K23242,RefSeq:WP_001296134.1,SO:0001217,UniParc:UPI000044405C,UniRef:UniRef100_P76264,UniRef:UniRef50_P76264,UniRef:UniRef90_P76264
contig_1	Pyrodigal	gene	1794675	1795484	.	-	.	ID=GCA000010485_01770_gene;locus_tag=GCA000010485_01770;gene=rlmA
contig_1	Pyrodigal	CDS	1794675	1795484	.	-	0	ID=GCA000010485_01770;Name=23S rRNA (guanine(745)-N(1))-methyltransferase;locus_tag=GCA000010485_01770;product=23S rRNA (guanine(745)-N(1))-methyltransferase;Dbxref=GO:0008168,GO:0008270,GO:0008989,GO:0052911,GO:0070475;gene=rlmA;Parent=GCA000010485_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000010095.1,SO:0001217,UniParc:UPI0001C22B2B,UniRef:UniRef100_A0A641BNE0,UniRef:UniRef50_P36999,UniRef:UniRef90_P36999;ec_number=2.1.1.187
contig_1	Infernal	regulatory_region	1795609	1796035	1.1e-14	-	.	ID=EFPPCJGBKI_305;Name=cspA thermoregulator;product=cspA thermoregulator;Dbxref=RFAM:RF01766;inference=profile:Rfam:RF01766;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	1795650	1795859	.	-	.	ID=GCA000010485_01771_gene;locus_tag=GCA000010485_01771;gene=cspE
contig_1	Pyrodigal	CDS	1795650	1795859	.	-	0	ID=GCA000010485_01771;Name=transcription antiterminator/RNA stability regulator CspE;locus_tag=GCA000010485_01771;product=transcription antiterminator/RNA stability regulator CspE;Dbxref=GO:0003677,GO:0005829;gene=cspE;Parent=GCA000010485_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000034825,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001062678.1,SO:0001217,UniParc:UPI0000059D29,UniRef:UniRef100_P0A9Y6,UniRef:UniRef50_P0A9Y6,UniRef:UniRef90_P0A9Y6
contig_1	Pyrodigal	gene	1796685	1796972	.	-	.	ID=GCA000010485_01772_gene;locus_tag=GCA000010485_01772;gene=yebO
contig_1	Pyrodigal	CDS	1796685	1796972	.	-	0	ID=GCA000010485_01772;Name=putative protein YebO;locus_tag=GCA000010485_01772;product=putative protein YebO;Dbxref=GO:0005886;gene=yebO;Parent=GCA000010485_01772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001006866.1,SO:0001217,UniParc:UPI000013ABC8,UniRef:UniRef100_P64499,UniRef:UniRef50_P64501,UniRef:UniRef90_P64499
contig_1	Pyrodigal	gene	1797349	1797588	.	+	.	ID=GCA000010485_01773_gene;locus_tag=GCA000010485_01773;gene=yobH
contig_1	Pyrodigal	CDS	1797349	1797588	.	+	0	ID=GCA000010485_01773;Name=putative protein YobH;locus_tag=GCA000010485_01773;product=putative protein YobH;gene=yobH;Parent=GCA000010485_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001211011.1,SO:0001217,UniParc:UPI00000DEC7A,UniRef:UniRef100_Q2MB16,UniRef:UniRef50_Q2MB16,UniRef:UniRef90_Q2MB16
contig_1	Pyrodigal	gene	1797732	1798523	.	-	.	ID=GCA000010485_01774_gene;locus_tag=GCA000010485_01774;gene=kdgR
contig_1	Pyrodigal	CDS	1797732	1798523	.	-	0	ID=GCA000010485_01774;Name=DNA-binding transcriptional regulator KdgR;locus_tag=GCA000010485_01774;product=DNA-binding transcriptional regulator KdgR;Dbxref=GO:0003700,GO:0006355;gene=kdgR;Parent=GCA000010485_01774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1414,COG:K,RefSeq:WP_001262186.1,SO:0001217,UniParc:UPI0001C22B2C,UniRef:UniRef100_A0A7I0KPX0,UniRef:UniRef50_P37728,UniRef:UniRef90_C3T682
contig_1	Pyrodigal	gene	1798700	1800073	.	+	.	ID=GCA000010485_01775_gene;locus_tag=GCA000010485_01775;gene=yebQ
contig_1	Pyrodigal	CDS	1798700	1800073	.	+	0	ID=GCA000010485_01775;Name=putative transporter YebQ;locus_tag=GCA000010485_01775;product=putative transporter YebQ;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=yebQ;Parent=GCA000010485_01775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08169,RefSeq:WP_001127222.1,SO:0001217,UniParc:UPI0000DACE8C,UniRef:UniRef100_A0A178T3B1,UniRef:UniRef50_P76269,UniRef:UniRef90_P76269
contig_1	Pyrodigal	gene	1800119	1801000	.	-	.	ID=GCA000010485_01776_gene;locus_tag=GCA000010485_01776;gene=htpX
contig_1	Pyrodigal	CDS	1800119	1801000	.	-	0	ID=GCA000010485_01776;Name=protease HtpX;locus_tag=GCA000010485_01776;product=protease HtpX;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0008270;gene=htpX;Parent=GCA000010485_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0501,COG:O,RefSeq:WP_000984517.1,SO:0001217,UniParc:UPI000012CDF8,UniRef:UniRef100_A7ZMV2,UniRef:UniRef50_P23894,UniRef:UniRef90_P23894;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1801192	1803240	.	-	.	ID=GCA000010485_01777_gene;locus_tag=GCA000010485_01777;gene=prc
contig_1	Pyrodigal	CDS	1801192	1803240	.	-	0	ID=GCA000010485_01777;Name=carboxy terminal-processing peptidase;locus_tag=GCA000010485_01777;product=carboxy terminal-processing peptidase;Dbxref=GO:0004175,GO:0004252,GO:0005515,GO:0005886,GO:0006508,GO:0007165,GO:0008236,GO:0030288;gene=prc;Parent=GCA000010485_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_001055794.1,SO:0001217,UniParc:UPI00000E4A15,UniRef:UniRef100_A0A061YGM2,UniRef:UniRef50_P23865,UniRef:UniRef90_P23865;ec_number=3.4.21.102
contig_1	Pyrodigal	gene	1803260	1803958	.	-	.	ID=GCA000010485_01778_gene;locus_tag=GCA000010485_01778;gene=proQ
contig_1	Pyrodigal	CDS	1803260	1803958	.	-	0	ID=GCA000010485_01778;Name=RNA chaperone ProQ;locus_tag=GCA000010485_01778;product=RNA chaperone ProQ;Dbxref=GO:0003723,GO:0005829,GO:0010608,GO:0033592,GO:0034057;gene=proQ;Parent=GCA000010485_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3109,COG:T,KEGG:K03607,RefSeq:WP_000431388.1,SO:0001217,UniParc:UPI0001C22B2D,UniRef:UniRef100_A0A061KX09,UniRef:UniRef50_P45577,UniRef:UniRef90_P45577
contig_1	Pyrodigal	gene	1804055	1804606	.	-	.	ID=GCA000010485_01779_gene;locus_tag=GCA000010485_01779;gene=msrC
contig_1	Pyrodigal	CDS	1804055	1804606	.	-	0	ID=GCA000010485_01779;Name=L-methionine (R)-S-oxide reductase;locus_tag=GCA000010485_01779;product=L-methionine (R)-S-oxide reductase;Dbxref=GO:0005829,GO:0033745,GO:0042803;gene=msrC;Parent=GCA000010485_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001043877,COG:COG1956,COG:VT,SO:0001217,UniParc:UPI000176B1C8,UniRef:UniRef100_A0A066T0U0,UniRef:UniRef50_P76270,UniRef:UniRef90_P76270;ec_number=1.8.4.14
contig_1	Pyrodigal	gene	1804682	1805965	.	+	.	ID=GCA000010485_01780_gene;locus_tag=GCA000010485_01780;gene=yebS
contig_1	Pyrodigal	CDS	1804682	1805965	.	+	0	ID=GCA000010485_01780;Name=membrane integrity lipid transport subunit YebS;locus_tag=GCA000010485_01780;product=membrane integrity lipid transport subunit YebS;Dbxref=GO:0005886,GO:0009408,GO:0046907,GO:0061024;gene=yebS;Parent=GCA000010485_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001207282,RefSeq:WP_001531756.1,SO:0001217,UniParc:UPI0001C22B2E,UniRef:UniRef100_A0A061YCF9,UniRef:UniRef50_P0AD03,UniRef:UniRef90_P0AD03
contig_1	Pyrodigal	gene	1805934	1808567	.	+	.	ID=GCA000010485_01781_gene;locus_tag=GCA000010485_01781;gene=yebT
contig_1	Pyrodigal	CDS	1805934	1808567	.	+	0	ID=GCA000010485_01781;Name=lipid-binding membrane homeostasis protein YebT;locus_tag=GCA000010485_01781;product=lipid-binding membrane homeostasis protein YebT;Dbxref=GO:0005886,GO:0030288,GO:0042802,GO:0120009;gene=yebT;Parent=GCA000010485_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001326728,COG:COG3008,COG:M,KEGG:K06192,RefSeq:WP_001298452.1,SO:0001217,UniParc:UPI00005EFA3D,UniRef:UniRef100_A0A061Y8J3,UniRef:UniRef50_P76272,UniRef:UniRef90_P76272
contig_1	Pyrodigal	gene	1808641	1810086	.	+	.	ID=GCA000010485_01782_gene;locus_tag=GCA000010485_01782;gene=rsmF
contig_1	Pyrodigal	CDS	1808641	1810086	.	+	0	ID=GCA000010485_01782;Name=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;locus_tag=GCA000010485_01782;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;Dbxref=GO:0001510,GO:0003723,GO:0005737,GO:0008649,GO:0009383,GO:0070475;gene=rsmF;Parent=GCA000010485_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3270,COG:J,KEGG:K11392,SO:0001217,UniParc:UPI0001C22B30,UniRef:UniRef100_A0AA36P5G7,UniRef:UniRef50_P76273,UniRef:UniRef90_P76273;ec_number=2.1.1.178
contig_1	Pyrodigal	gene	1810203	1810439	.	+	.	ID=GCA000010485_01783_gene;locus_tag=GCA000010485_01783;gene=yebV
contig_1	Pyrodigal	CDS	1810203	1810439	.	+	0	ID=GCA000010485_01783;Name=putative protein YebV;locus_tag=GCA000010485_01783;product=putative protein YebV;gene=yebV;Parent=GCA000010485_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295499.1,SO:0001217,UniParc:UPI000013ABD0,UniRef:UniRef100_P64503,UniRef:UniRef50_P64503,UniRef:UniRef90_P64503
contig_1	Pyrodigal	gene	1810460	1810735	.	+	.	ID=GCA000010485_01784_gene;locus_tag=GCA000010485_01784;gene=yebW
contig_1	Pyrodigal	CDS	1810460	1810735	.	+	0	ID=GCA000010485_01784;Name=putative protein YebW;locus_tag=GCA000010485_01784;product=putative protein YebW;gene=yebW;Parent=GCA000010485_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000D509CA,UniRef:UniRef100_A0A1Z3DFX8,UniRef:UniRef50_P76275,UniRef:UniRef90_P76275
contig_1	Pyrodigal	gene	1810736	1811392	.	-	.	ID=GCA000010485_01785_gene;locus_tag=GCA000010485_01785;gene=pphA
contig_1	Pyrodigal	CDS	1810736	1811392	.	-	0	ID=GCA000010485_01785;Name=protein-serine/threonine phosphatase;locus_tag=GCA000010485_01785;product=protein-serine/threonine phosphatase;Dbxref=GO:0005737,GO:0008138,GO:0008803,GO:0009266,GO:0016787,GO:0016791,GO:0017018,GO:0033192,GO:0046872,GO:0110154,GO:0140791,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990439;gene=pphA;Parent=GCA000010485_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07313,RefSeq:WP_000812745.1,SO:0001217,UniParc:UPI00021857C6,UniRef:UniRef100_A0A061YCD5,UniRef:UniRef50_P55798,UniRef:UniRef90_P55798;ec_number=3.1.3.16
contig_1	Infernal	gene	1811523	1811667	.	+	.	ID=GCA000010485_01786_gene;locus_tag=GCA000010485_01786;gene=SraC_RyeA
contig_1	Infernal	ncRNA	1811523	1811667	6e-27	+	.	ID=GCA000010485_01786;Name=SraC/RyeA RNA;locus_tag=GCA000010485_01786;product=SraC/RyeA RNA;Dbxref=RFAM:RF00101;Parent=GCA000010485_01786_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00101
contig_1	Infernal	gene	1811527	1811626	.	-	.	ID=GCA000010485_01787_gene;locus_tag=GCA000010485_01787;gene=SdsR_RyeB
contig_1	Infernal	ncRNA	1811527	1811626	2e-18	-	.	ID=GCA000010485_01787;Name=SdsR_RyeB RNA;locus_tag=GCA000010485_01787;product=SdsR_RyeB RNA;Dbxref=RFAM:RF00111;Parent=GCA000010485_01787_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00111
contig_1	Pyrodigal	gene	1811787	1812128	.	-	.	ID=GCA000010485_01788_gene;locus_tag=GCA000010485_01788;gene=yebY
contig_1	Pyrodigal	CDS	1811787	1812128	.	-	0	ID=GCA000010485_01788;Name=putative protein YebY;locus_tag=GCA000010485_01788;product=putative protein YebY;Dbxref=GO:0030288,GO:0055070;gene=yebY;Parent=GCA000010485_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000976472.1,SO:0001217,UniParc:UPI00005E317C,UniRef:UniRef100_E2QN43,UniRef:UniRef50_P64506,UniRef:UniRef90_P64506
contig_1	Pyrodigal	gene	1812141	1813013	.	-	.	ID=GCA000010485_01789_gene;locus_tag=GCA000010485_01789;gene=copD
contig_1	Pyrodigal	CDS	1812141	1813013	.	-	0	ID=GCA000010485_01789;Name=copper homeostasis membrane protein CopD;locus_tag=GCA000010485_01789;product=copper homeostasis membrane protein CopD;Dbxref=GO:0005886,GO:0006825,GO:0016020;gene=copD;Parent=GCA000010485_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000879317.1,SO:0001217,UniParc:UPI0001C22B33,UniRef:UniRef100_A0A061KZK2,UniRef:UniRef50_P76278,UniRef:UniRef90_P76278
contig_1	Pyrodigal	gene	1813017	1813391	.	-	.	ID=GCA000010485_01790_gene;locus_tag=GCA000010485_01790;gene=yobA
contig_1	Pyrodigal	CDS	1813017	1813391	.	-	0	ID=GCA000010485_01790;Name=CopC domain-containing protein YobA;locus_tag=GCA000010485_01790;product=CopC domain-containing protein YobA;Dbxref=GO:0005507,GO:0005886,GO:0006825,GO:0042597,GO:0046688;gene=yobA;Parent=GCA000010485_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2372,COG:P,RefSeq:WP_000168747.1,SO:0001217,UniParc:UPI000013BC60,UniRef:UniRef100_P0AA57,UniRef:UniRef50_P0AA57,UniRef:UniRef90_P0AA57
contig_1	Pyrodigal	gene	1813530	1813760	.	+	.	ID=GCA000010485_01791_gene;locus_tag=GCA000010485_01791;gene=holE
contig_1	Pyrodigal	CDS	1813530	1813760	.	+	0	ID=GCA000010485_01791;Name=DNA polymerase III subunit theta;locus_tag=GCA000010485_01791;product=DNA polymerase III subunit theta;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=holE;Parent=GCA000010485_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000916763,KEGG:K02345,RefSeq:WP_000916763.1,SO:0001217,UniParc:UPI000012CACE,UniRef:UniRef100_P0ABS8,UniRef:UniRef50_P0ABS8,UniRef:UniRef90_P0ABS8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1813862	1814518	.	+	.	ID=GCA000010485_01792_gene;locus_tag=GCA000010485_01792;gene=yobB
contig_1	Pyrodigal	CDS	1813862	1814518	.	+	0	ID=GCA000010485_01792;Name=putative protein YobB;locus_tag=GCA000010485_01792;product=putative protein YobB;gene=yobB;Parent=GCA000010485_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0388,COG:V,RefSeq:WP_000011664.1,SO:0001217,UniParc:UPI0000D509CD,UniRef:UniRef100_E2QN47,UniRef:UniRef50_P76280,UniRef:UniRef90_P76280
contig_1	Pyrodigal	gene	1814542	1815204	.	+	.	ID=GCA000010485_01793_gene;locus_tag=GCA000010485_01793;gene=exoX
contig_1	Pyrodigal	CDS	1814542	1815204	.	+	0	ID=GCA000010485_01793;Name=exodeoxyribonuclease X;locus_tag=GCA000010485_01793;product=exodeoxyribonuclease X;Dbxref=GO:0003676,GO:0005829,GO:0006298,GO:0008408,GO:0045004;gene=exoX;Parent=GCA000010485_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_000944256.1,SO:0001217,UniParc:UPI000012A385,UniRef:UniRef100_P0AEK0,UniRef:UniRef50_P0AEK0,UniRef:UniRef90_P0AEK0;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1815201	1817261	.	-	.	ID=GCA000010485_01794_gene;locus_tag=GCA000010485_01794;gene=ptrB
contig_1	Pyrodigal	CDS	1815201	1817261	.	-	0	ID=GCA000010485_01794;Name=oligopeptidase B;locus_tag=GCA000010485_01794;product=oligopeptidase B;Dbxref=GO:0004252,GO:0005737,GO:0006508,GO:0070012;gene=ptrB;Parent=GCA000010485_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1770,COG:E,KEGG:K01354,RefSeq:WP_000936925.1,SO:0001217,UniParc:UPI0001C22B34,UniRef:UniRef100_A0A061YGJ0,UniRef:UniRef50_P24555,UniRef:UniRef90_P24555;ec_number=3.4.21.83
contig_1	Pyrodigal	gene	1817470	1818129	.	-	.	ID=GCA000010485_01795_gene;locus_tag=GCA000010485_01795;gene=yebE
contig_1	Pyrodigal	CDS	1817470	1818129	.	-	0	ID=GCA000010485_01795;Name=Inner membrane protein YebE;locus_tag=GCA000010485_01795;product=Inner membrane protein YebE;Dbxref=GO:0005886;gene=yebE;Parent=GCA000010485_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2979,COG:S,RefSeq:WP_000024724.1,SO:0001217,UniParc:UPI0001C22B35,UniRef:UniRef100_A0A061YEQ4,UniRef:UniRef50_P33218,UniRef:UniRef90_P33218
contig_1	Pyrodigal	gene	1818456	1818812	.	-	.	ID=GCA000010485_01796_gene;locus_tag=GCA000010485_01796;gene=yebF
contig_1	Pyrodigal	CDS	1818456	1818812	.	-	0	ID=GCA000010485_01796;Name=protein YebF;locus_tag=GCA000010485_01796;product=protein YebF;Dbxref=GO:0005576;gene=yebF;Parent=GCA000010485_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295500.1,SO:0001217,UniParc:UPI00006842FA,UniRef:UniRef100_Q8XCK0,UniRef:UniRef50_P33219,UniRef:UniRef90_P33219
contig_1	Pyrodigal	gene	1818879	1819169	.	-	.	ID=GCA000010485_01797_gene;locus_tag=GCA000010485_01797;gene=yebG
contig_1	Pyrodigal	CDS	1818879	1819169	.	-	0	ID=GCA000010485_01797;Name=DNA damage-inducible protein YebG;locus_tag=GCA000010485_01797;product=DNA damage-inducible protein YebG;Dbxref=GO:0005829,GO:0006281,GO:0009432,GO:0010165;gene=yebG;Parent=GCA000010485_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3141,COG:L,KEGG:K09918,RefSeq:WP_000257738.1,SO:0001217,UniParc:UPI000013ABC5,UniRef:UniRef100_P0ACY9,UniRef:UniRef50_P0ACY9,UniRef:UniRef90_P0ACY9
contig_1	Pyrodigal	gene	1819303	1820481	.	+	.	ID=GCA000010485_01798_gene;locus_tag=GCA000010485_01798;gene=purT
contig_1	Pyrodigal	CDS	1819303	1820481	.	+	0	ID=GCA000010485_01798;Name=formate-dependent phosphoribosylglycinamide formyltransferase;locus_tag=GCA000010485_01798;product=formate-dependent phosphoribosylglycinamide formyltransferase;Dbxref=GO:0000287,GO:0004644,GO:0005524,GO:0005829,GO:0006189,GO:0009152,GO:0043815;gene=purT;Parent=GCA000010485_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0027,COG:F,RefSeq:WP_000173466.1,SO:0001217,UniParc:UPI0000D509D0,UniRef:UniRef100_A1AC10,UniRef:UniRef50_P33221,UniRef:UniRef90_P33221;ec_number=6.3.1.21
contig_1	Pyrodigal	gene	1820537	1821178	.	-	.	ID=GCA000010485_01799_gene;locus_tag=GCA000010485_01799;gene=kdgA
contig_1	Pyrodigal	CDS	1820537	1821178	.	-	0	ID=GCA000010485_01799;Name=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;locus_tag=GCA000010485_01799;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;Dbxref=GO:0005737,GO:0008675,GO:0008700,GO:0106009;gene=kdgA;Parent=GCA000010485_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000800512,COG:COG0800,COG:G,RefSeq:WP_000800503.1,SO:0001217,UniParc:UPI0001C22B36,UniRef:UniRef100_A0A061KZJ1,UniRef:UniRef50_P0A955,UniRef:UniRef90_P0A955;ec_number=4.1.3.16
contig_1	Pyrodigal	gene	1821215	1823026	.	-	.	ID=GCA000010485_01800_gene;locus_tag=GCA000010485_01800;gene=edd
contig_1	Pyrodigal	CDS	1821215	1823026	.	-	0	ID=GCA000010485_01800;Name=phosphogluconate dehydratase;locus_tag=GCA000010485_01800;product=phosphogluconate dehydratase;Dbxref=GO:0004456,GO:0005829,GO:0009255,GO:0046177,GO:0046872,GO:0051539;gene=edd;Parent=GCA000010485_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,RefSeq:WP_001069461.1,SO:0001217,UniParc:UPI00005EFA36,UniRef:UniRef100_E2QN55,UniRef:UniRef50_P0ADF6,UniRef:UniRef90_P0ADF6;ec_number=4.2.1.12
contig_1	Pyrodigal	gene	1823261	1824736	.	-	.	ID=GCA000010485_01801_gene;locus_tag=GCA000010485_01801;gene=zwf
contig_1	Pyrodigal	CDS	1823261	1824736	.	-	0	ID=GCA000010485_01801;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000010485_01801;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0005829,GO:0006006,GO:0006098,GO:0009051,GO:0009372,GO:0016614,GO:0042802,GO:0050661;gene=zwf;Parent=GCA000010485_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,KEGG:K00036,RefSeq:WP_000301727.1,SO:0001217,UniParc:UPI000012AF1D,UniRef:UniRef100_P0AC53,UniRef:UniRef50_P0AC53,UniRef:UniRef90_P0AC53;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1824902	1825051	.	-	.	ID=GCA000010485_01802_gene;locus_tag=GCA000010485_01802
contig_1	Pyrodigal	CDS	1824902	1825051	.	-	0	ID=GCA000010485_01802;Name=hypothetical protein;locus_tag=GCA000010485_01802;product=hypothetical protein;Parent=GCA000010485_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000155622.1,SO:0001217,UniParc:UPI00000DEC8C,UniRef:UniRef100_A0A066SSE6,UniRef:UniRef50_B2U498,UniRef:UniRef90_B2U498
contig_1	Pyrodigal	gene	1825074	1825943	.	+	.	ID=GCA000010485_01803_gene;locus_tag=GCA000010485_01803;gene=hexR
contig_1	Pyrodigal	CDS	1825074	1825943	.	+	0	ID=GCA000010485_01803;Name=DNA-binding transcriptional regulator HexR;locus_tag=GCA000010485_01803;product=DNA-binding transcriptional regulator HexR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0006974,GO:0097367,GO:1901135;gene=hexR;Parent=GCA000010485_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001056706,COG:COG1737,COG:K,KEGG:K19337,RefSeq:WP_001056695.1,SO:0001217,UniParc:UPI00000DEC8D,UniRef:UniRef100_E2QN57,UniRef:UniRef50_P46118,UniRef:UniRef90_P46118
contig_1	Pyrodigal	gene	1826071	1827513	.	+	.	ID=GCA000010485_01804_gene;locus_tag=GCA000010485_01804;gene=pyk
contig_1	Pyrodigal	CDS	1826071	1827513	.	+	0	ID=GCA000010485_01804;Name=pyruvate kinase;locus_tag=GCA000010485_01804;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0005737,GO:0005829,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000010485_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0469,COG:G,KEGG:K00873,RefSeq:WP_000091149.1,SO:0001217,UniParc:UPI00005EFA35,UniRef:UniRef100_E2QN58,UniRef:UniRef50_P21599,UniRef:UniRef90_P21599;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1827645	1828616	.	-	.	ID=GCA000010485_01805_gene;locus_tag=GCA000010485_01805;gene=lpxM
contig_1	Pyrodigal	CDS	1827645	1828616	.	-	0	ID=GCA000010485_01805;Name=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;locus_tag=GCA000010485_01805;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;Dbxref=GO:0005886,GO:0009103,GO:0009276,GO:0016020,GO:0016747,GO:0019107,GO:0036104;gene=lpxM;Parent=GCA000010485_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1560,COG:I,KEGG:K02517,RefSeq:WP_001296141.1,SO:0001217,UniParc:UPI00005EFA34,UniRef:UniRef100_E2QN59,UniRef:UniRef50_P24205,UniRef:UniRef90_P24205;ec_number=2.3.1.243
contig_1	Pyrodigal	gene	1828735	1830057	.	-	.	ID=GCA000010485_01806_gene;locus_tag=GCA000010485_01806;gene=mepM
contig_1	Pyrodigal	CDS	1828735	1830057	.	-	0	ID=GCA000010485_01806;Name=murein DD-endopeptidase MepM;locus_tag=GCA000010485_01806;product=murein DD-endopeptidase MepM;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0042834,GO:0045227,GO:0046872,GO:0071555;gene=mepM;Parent=GCA000010485_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3061,COG:D,RefSeq:WP_001184045.1,SO:0001217,UniParc:UPI000013ABBD,UniRef:UniRef100_P0AFS9,UniRef:UniRef50_P0AFS9,UniRef:UniRef90_P0AFS9;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1830073	1831059	.	-	.	ID=GCA000010485_01807_gene;locus_tag=GCA000010485_01807;gene=znuA
contig_1	Pyrodigal	CDS	1830073	1831059	.	-	0	ID=GCA000010485_01807;Name=zinc ABC transporter substrate-binding protein ZnuA;locus_tag=GCA000010485_01807;product=zinc ABC transporter substrate-binding protein ZnuA;Dbxref=GO:0006829,GO:0007155,GO:0008270,GO:0016020,GO:0042597,GO:0046872,GO:0055052,GO:0071578;gene=znuA;Parent=GCA000010485_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4531,COG:P,SO:0001217,UniParc:UPI0001C22E28,UniRef:UniRef100_A0A193RLK4,UniRef:UniRef50_P39172,UniRef:UniRef90_P39172;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1831084	1831839	.	+	.	ID=GCA000010485_01808_gene;locus_tag=GCA000010485_01808;gene=znuC
contig_1	Pyrodigal	CDS	1831084	1831839	.	+	0	ID=GCA000010485_01808;Name=zinc ABC transporter ATP-binding protein ZnuC;locus_tag=GCA000010485_01808;product=zinc ABC transporter ATP-binding protein ZnuC;Dbxref=GO:0005524,GO:0005886,GO:0006829,GO:0010043,GO:0015633,GO:0016887;gene=znuC;Parent=GCA000010485_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_000202996.1,SO:0001217,UniParc:UPI000013C43F,UniRef:UniRef100_P0A9X1,UniRef:UniRef50_P0A9X1,UniRef:UniRef90_P0A9X1;ec_number=7.2.2.20
contig_1	Pyrodigal	gene	1831836	1832621	.	+	.	ID=GCA000010485_01809_gene;locus_tag=GCA000010485_01809;gene=znuB
contig_1	Pyrodigal	CDS	1831836	1832621	.	+	0	ID=GCA000010485_01809;Name=zinc ABC transporter permease subunit ZnuB;locus_tag=GCA000010485_01809;product=zinc ABC transporter permease subunit ZnuB;Dbxref=GO:0000006,GO:0005886,GO:0010043,GO:0016020,GO:0042626,GO:0055052,GO:0055085,GO:0071578;gene=znuB;Parent=GCA000010485_01809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_000571478.1,SO:0001217,UniParc:UPI00000DEC90,UniRef:UniRef100_C3T5S5,UniRef:UniRef50_P39832,UniRef:UniRef90_P39832;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1832815	1833417	.	-	.	ID=GCA000010485_01810_gene;locus_tag=GCA000010485_01810
contig_1	Pyrodigal	CDS	1832815	1833417	.	-	0	ID=GCA000010485_01810;Name=IS3 family transposase;locus_tag=GCA000010485_01810;product=IS3 family transposase;Dbxref=GO:0004803;Parent=GCA000010485_01810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q47310,UniRef:UniRef90_A0A376VMP5
contig_1	Pyrodigal	gene	1833642	1833815	.	-	.	ID=GCA000010485_01811_gene;locus_tag=GCA000010485_01811;gene=tnp
contig_1	Pyrodigal	CDS	1833642	1833815	.	-	0	ID=GCA000010485_01811;Name=IS3 family transposase ORF A;locus_tag=GCA000010485_01811;product=IS3 family transposase ORF A;Dbxref=GO:0043565;gene=tnp;Parent=GCA000010485_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000198510.1,SO:0001217,UniParc:UPI00005EF6D6,UniRef:UniRef100_A0A066SVQ4,UniRef:UniRef50_Q47309,UniRef:UniRef90_Q47309
contig_1	Pyrodigal	gene	1834273	1835283	.	-	.	ID=GCA000010485_01812_gene;locus_tag=GCA000010485_01812;gene=ruvB
contig_1	Pyrodigal	CDS	1834273	1835283	.	-	0	ID=GCA000010485_01812;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000010485_01812;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000010485_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_000568520.1,SO:0001217,UniParc:UPI0001C22E2A,UniRef:UniRef100_A0A061YJ40,UniRef:UniRef50_P0A812,UniRef:UniRef90_P0A812;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1835292	1835903	.	-	.	ID=GCA000010485_01813_gene;locus_tag=GCA000010485_01813;gene=ruvA
contig_1	Pyrodigal	CDS	1835292	1835903	.	-	0	ID=GCA000010485_01813;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000010485_01813;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0009432,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000010485_01813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_000580323.1,SO:0001217,UniParc:UPI0000110880,UniRef:UniRef100_P0A809,UniRef:UniRef50_P0A809,UniRef:UniRef90_P0A809;ec_number=3.6.4.12
contig_1	Bakta	gene	1836042	1836107	.	-	.	ID=GCA000010485_01814_gene;locus_tag=GCA000010485_01814;inference=ab initio prediction:Bakta;gene=yobI
contig_1	Bakta	CDS	1836042	1836107	.	-	0	ID=GCA000010485_01814;Name=putative protein YobI;locus_tag=GCA000010485_01814;product=putative protein YobI;gene=yobI;Parent=GCA000010485_01814_gene;Note=RefSeq:WP_072093883.1,SO:0001217,UniParc:UPI00092CEDC7,UniRef:UniRef100_A0A1U9U2S9,UniRef:UniRef50_C1P604,UniRef:UniRef90_C1P604
contig_1	Pyrodigal	gene	1836178	1836780	.	+	.	ID=GCA000010485_01815_gene;locus_tag=GCA000010485_01815;gene=yebB
contig_1	Pyrodigal	CDS	1836178	1836780	.	+	0	ID=GCA000010485_01815;Name=YebB family permuted papain-like enzyme;locus_tag=GCA000010485_01815;product=YebB family permuted papain-like enzyme;gene=yebB;Parent=GCA000010485_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001024911.1,SO:0001217,UniParc:UPI0001C22E2B,UniRef:UniRef100_A0A061K536,UniRef:UniRef50_P24238,UniRef:UniRef90_B7USN9
contig_1	Pyrodigal	gene	1836782	1837303	.	-	.	ID=GCA000010485_01816_gene;locus_tag=GCA000010485_01816;gene=ruvC
contig_1	Pyrodigal	CDS	1836782	1837303	.	-	0	ID=GCA000010485_01816;Name=crossover junction endodeoxyribonuclease RuvC;locus_tag=GCA000010485_01816;product=crossover junction endodeoxyribonuclease RuvC;Dbxref=GO:0000287,GO:0003677,GO:0005737,GO:0006281,GO:0006310,GO:0008821,GO:0048476;gene=ruvC;Parent=GCA000010485_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0817,COG:L,KEGG:K01159,RefSeq:WP_001295503.1,SO:0001217,UniParc:UPI000016547B,UniRef:UniRef100_P0A814,UniRef:UniRef50_P0A814,UniRef:UniRef90_P0A814;ec_number=3.1.21.10
contig_1	Bakta	gene	1837303	1837338	.	-	.	ID=GCA000010485_01817_gene;locus_tag=GCA000010485_01817;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1837303	1837338	.	-	0	ID=GCA000010485_01817;Name=Holliday junction resolvase;locus_tag=GCA000010485_01817;product=Holliday junction resolvase;Parent=GCA000010485_01817_gene;Note=SO:0001217,UniParc:UPI00000BB0C1,UniRef:UniRef100_A0A376U837,UniRef:UniRef50_A0A3P8KIZ5,UniRef:UniRef90_A0A376U837
contig_1	Pyrodigal	gene	1837338	1838078	.	-	.	ID=GCA000010485_01818_gene;locus_tag=GCA000010485_01818;gene=yebC
contig_1	Pyrodigal	CDS	1837338	1838078	.	-	0	ID=GCA000010485_01818;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000010485_01818;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=yebC;Parent=GCA000010485_01818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_000907234.1,SO:0001217,UniParc:UPI00000D0486,UniRef:UniRef100_P67176,UniRef:UniRef50_P0A8A0,UniRef:UniRef90_P0A8A0
contig_1	Pyrodigal	gene	1838107	1838550	.	-	.	ID=GCA000010485_01819_gene;locus_tag=GCA000010485_01819;gene=nudB
contig_1	Pyrodigal	CDS	1838107	1838550	.	-	0	ID=GCA000010485_01819;Name=dihydroneopterin triphosphate diphosphatase;locus_tag=GCA000010485_01819;product=dihydroneopterin triphosphate diphosphatase;Dbxref=GO:0004081,GO:0006167,GO:0006754,GO:0008828,GO:0019177,GO:0046656,GO:0046872;gene=nudB;Parent=GCA000010485_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,SO:0001217,UniParc:UPI000188823A,UniRef:UniRef100_A0A2T8JAI6,UniRef:UniRef50_P0AFC0,UniRef:UniRef90_P0AFC0;ec_number=3.6.1.67
contig_1	Pyrodigal	gene	1838552	1840324	.	-	.	ID=GCA000010485_01820_gene;locus_tag=GCA000010485_01820;gene=aspS
contig_1	Pyrodigal	CDS	1838552	1840324	.	-	0	ID=GCA000010485_01820;Name=aspartate--tRNA ligase;locus_tag=GCA000010485_01820;product=aspartate--tRNA ligase;Dbxref=GO:0003676,GO:0004815,GO:0005524,GO:0005737,GO:0006422;gene=aspS;Parent=GCA000010485_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,RefSeq:WP_001258676.1,SO:0001217,UniParc:UPI0001C22E2C,UniRef:UniRef100_A0A061K5F6,UniRef:UniRef50_P21889,UniRef:UniRef90_P21889;ec_number=6.1.1.12
contig_1	Pyrodigal	gene	1840634	1841200	.	+	.	ID=GCA000010485_01821_gene;locus_tag=GCA000010485_01821;gene=yecD
contig_1	Pyrodigal	CDS	1840634	1841200	.	+	0	ID=GCA000010485_01821;Name=hydrolase;locus_tag=GCA000010485_01821;product=hydrolase;Dbxref=GO:0005829,GO:0016787;gene=yecD;Parent=GCA000010485_01821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000891625.1,SO:0001217,UniParc:UPI000188735B,UniRef:UniRef100_A0A061YJU1,UniRef:UniRef50_P0ADI7,UniRef:UniRef90_P0ADI7;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1841197	1842015	.	+	.	ID=GCA000010485_01822_gene;locus_tag=GCA000010485_01822;gene=yecE
contig_1	Pyrodigal	CDS	1841197	1842015	.	+	0	ID=GCA000010485_01822;Name=UPF0759 protein YecE;locus_tag=GCA000010485_01822;product=UPF0759 protein YecE;gene=yecE;Parent=GCA000010485_01822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000639277.1,SO:0001217,UniParc:UPI0001C22E2D,UniRef:UniRef100_A0A061K0F6,UniRef:UniRef50_P37348,UniRef:UniRef90_P37348
contig_1	Pyrodigal	gene	1842068	1842463	.	+	.	ID=GCA000010485_01823_gene;locus_tag=GCA000010485_01823;gene=yecN
contig_1	Pyrodigal	CDS	1842068	1842463	.	+	0	ID=GCA000010485_01823;Name=Inner membrane protein YecN;locus_tag=GCA000010485_01823;product=Inner membrane protein YecN;Dbxref=GO:0005886;gene=yecN;Parent=GCA000010485_01823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3788,COG:S,RefSeq:WP_000252980.1,SO:0001217,UniParc:UPI000013ABE7,UniRef:UniRef100_P64515,UniRef:UniRef50_P64515,UniRef:UniRef90_P64515
contig_1	Pyrodigal	gene	1842504	1843247	.	+	.	ID=GCA000010485_01824_gene;locus_tag=GCA000010485_01824;gene=cmoA
contig_1	Pyrodigal	CDS	1842504	1843247	.	+	0	ID=GCA000010485_01824;Name=carboxy-S-adenosyl-L-methionine synthase CmoA;locus_tag=GCA000010485_01824;product=carboxy-S-adenosyl-L-methionine synthase CmoA;Dbxref=GO:0002098,GO:0016743,GO:1904047;gene=cmoA;Parent=GCA000010485_01824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4106,RefSeq:WP_000019588.1,SO:0001217,UniParc:UPI000000E2DF,UniRef:UniRef100_A7ZMZ5,UniRef:UniRef50_P76290,UniRef:UniRef90_P76290;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	1843244	1844215	.	+	.	ID=GCA000010485_01825_gene;locus_tag=GCA000010485_01825;gene=cmoB
contig_1	Pyrodigal	CDS	1843244	1844215	.	+	0	ID=GCA000010485_01825;Name=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;locus_tag=GCA000010485_01825;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;Dbxref=GO:0002098,GO:0016765;gene=cmoB;Parent=GCA000010485_01825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2227,COG:H,RefSeq:WP_000564759.1,SO:0001217,UniParc:UPI0001C22E2E,UniRef:UniRef100_A0A061K5G1,UniRef:UniRef50_P76291,UniRef:UniRef90_P76291;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	1844251	1846680	.	-	.	ID=GCA000010485_01826_gene;locus_tag=GCA000010485_01826;gene=torZ
contig_1	Pyrodigal	CDS	1844251	1846680	.	-	0	ID=GCA000010485_01826;Name=trimethylamine N-oxide reductase TorZ;locus_tag=GCA000010485_01826;product=trimethylamine N-oxide reductase TorZ;Dbxref=GO:0009055,GO:0009061,GO:0030151,GO:0030288,GO:0043546,GO:0050626;gene=torZ;Parent=GCA000010485_01826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000176781,COG:C,COG:COG0243,KEGG:K08351,RefSeq:WP_000176764.1,SO:0001217,UniParc:UPI0001C22E2F,UniRef:UniRef100_A0A066T5H9,UniRef:UniRef50_P46923,UniRef:UniRef90_P46923;ec_number=1.7.2.3
contig_1	Pyrodigal	gene	1846705	1847805	.	-	.	ID=GCA000010485_01827_gene;locus_tag=GCA000010485_01827;gene=torY
contig_1	Pyrodigal	CDS	1846705	1847805	.	-	0	ID=GCA000010485_01827;Name=Cytochrome c-type protein TorY;locus_tag=GCA000010485_01827;product=Cytochrome c-type protein TorY;Dbxref=GO:0005506,GO:0005886,GO:0009055,GO:0009061,GO:0009276,GO:0016020,GO:0019645,GO:0020037;gene=torY;Parent=GCA000010485_01827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07821,RefSeq:WP_001214293.1,SO:0001217,UniParc:UPI0001C22E30,UniRef:UniRef100_A0A066T9N7,UniRef:UniRef50_P52005,UniRef:UniRef90_P52005
contig_1	Infernal	gene	1848114	1848421	.	-	.	ID=GCA000010485_01828_gene;locus_tag=GCA000010485_01828;gene=micL
contig_1	Infernal	ncRNA	1848114	1848421	7.8e-53	-	.	ID=GCA000010485_01828;Name=MicL sRNA;locus_tag=GCA000010485_01828;gene=micL;product=MicL sRNA;Dbxref=RFAM:RF02654;Parent=GCA000010485_01828_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02654
contig_1	Pyrodigal	gene	1848193	1848939	.	-	.	ID=GCA000010485_01829_gene;locus_tag=GCA000010485_01829;gene=cutC
contig_1	Pyrodigal	CDS	1848193	1848939	.	-	0	ID=GCA000010485_01829;Name=copper homeostasis protein CutC;locus_tag=GCA000010485_01829;product=copper homeostasis protein CutC;Dbxref=GO:0005507,GO:0005737,GO:0055070;gene=cutC;Parent=GCA000010485_01829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3142,COG:P,RefSeq:WP_001185734.1,SO:0001217,UniParc:UPI00000DEC98,UniRef:UniRef100_B7USQ1,UniRef:UniRef50_P67826,UniRef:UniRef90_P67826
contig_1	Pyrodigal	gene	1848953	1849519	.	-	.	ID=GCA000010485_01830_gene;locus_tag=GCA000010485_01830;gene=yecM
contig_1	Pyrodigal	CDS	1848953	1849519	.	-	0	ID=GCA000010485_01830;Name=VOC family protein;locus_tag=GCA000010485_01830;product=VOC family protein;Dbxref=GO:0005829;gene=yecM;Parent=GCA000010485_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3102,COG:R,RefSeq:WP_001490174.1,SO:0001217,UniParc:UPI0001C22E31,UniRef:UniRef100_A0A061K3N7,UniRef:UniRef50_P52007,UniRef:UniRef90_P52007
contig_1	Pyrodigal	gene	1849735	1851468	.	+	.	ID=GCA000010485_01831_gene;locus_tag=GCA000010485_01831;gene=argS
contig_1	Pyrodigal	CDS	1849735	1851468	.	+	0	ID=GCA000010485_01831;Name=arginine--tRNA ligase;locus_tag=GCA000010485_01831;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA000010485_01831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_001025326.1,SO:0001217,UniParc:UPI00000DEC9A,UniRef:UniRef100_Q8FGQ0,UniRef:UniRef50_P11875,UniRef:UniRef90_P11875;ec_number=6.1.1.19
contig_1	Pyrodigal	gene	1851521	1851913	.	-	.	ID=GCA000010485_01832_gene;locus_tag=GCA000010485_01832;gene=flhE
contig_1	Pyrodigal	CDS	1851521	1851913	.	-	0	ID=GCA000010485_01832;Name=flagellar protein FlhE;locus_tag=GCA000010485_01832;product=flagellar protein FlhE;Dbxref=GO:0009288,GO:0044781;gene=flhE;Parent=GCA000010485_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001233619,BlastRules:WP_001259583,KEGG:K03516,RefSeq:WP_001202076.1,SO:0001217,UniParc:UPI0001C22E32,UniRef:UniRef100_A0A061K551,UniRef:UniRef50_P76297,UniRef:UniRef90_P76297
contig_1	Pyrodigal	gene	1851913	1853991	.	-	.	ID=GCA000010485_01833_gene;locus_tag=GCA000010485_01833;gene=flhA
contig_1	Pyrodigal	CDS	1851913	1853991	.	-	0	ID=GCA000010485_01833;Name=flagellar biosynthesis protein FlhA;locus_tag=GCA000010485_01833;product=flagellar biosynthesis protein FlhA;Dbxref=GO:0005886,GO:0006935,GO:0009288,GO:0016020,GO:0030254,GO:0030257,GO:0044780,GO:0071973,GO:0120102;gene=flhA;Parent=GCA000010485_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1298,COG:N,KEGG:K02400,RefSeq:WP_000066973.1,SO:0001217,UniParc:UPI0001C22E33,UniRef:UniRef100_A0A066T9P0,UniRef:UniRef50_P76298,UniRef:UniRef90_P76298
contig_1	Pyrodigal	gene	1853984	1855132	.	-	.	ID=GCA000010485_01834_gene;locus_tag=GCA000010485_01834;gene=flhB
contig_1	Pyrodigal	CDS	1853984	1855132	.	-	0	ID=GCA000010485_01834;Name=flagellar biosynthesis protein FlhB;locus_tag=GCA000010485_01834;product=flagellar biosynthesis protein FlhB;Dbxref=GO:0005886,GO:0009306,GO:0015031,GO:0016020,GO:0044780;gene=flhB;Parent=GCA000010485_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02401,RefSeq:WP_001278946.1,SO:0001217,UniParc:UPI0001C22E34,UniRef:UniRef100_A0A066T9Y1,UniRef:UniRef50_P76299,UniRef:UniRef90_P76299
contig_1	Pyrodigal	gene	1855321	1855965	.	-	.	ID=GCA000010485_01835_gene;locus_tag=GCA000010485_01835;gene=cheZ
contig_1	Pyrodigal	CDS	1855321	1855965	.	-	0	ID=GCA000010485_01835;Name=protein phosphatase CheZ;locus_tag=GCA000010485_01835;product=protein phosphatase CheZ;Dbxref=GO:0003824,GO:0004721,GO:0005829,GO:0005886,GO:0006935,GO:0009288,GO:0042802,GO:0050920,GO:0051219,GO:0071978,GO:0098561,GO:1902021;gene=cheZ;Parent=GCA000010485_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000983609.1,SO:0001217,UniParc:UPI00001277C4,UniRef:UniRef100_P0A9H9,UniRef:UniRef50_P0A9H9,UniRef:UniRef90_P0A9H9;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1855976	1856365	.	-	.	ID=GCA000010485_01836_gene;locus_tag=GCA000010485_01836;gene=cheY
contig_1	Pyrodigal	CDS	1855976	1856365	.	-	0	ID=GCA000010485_01836;Name=chemotaxis regulatory protein CheY;locus_tag=GCA000010485_01836;product=chemotaxis regulatory protein CheY;Dbxref=GO:0000160,GO:0005737,GO:0046872;gene=cheY;Parent=GCA000010485_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0784,COG:T,RefSeq:WP_000763867.1,SO:0001217,UniParc:UPI0000110FFC,UniRef:UniRef100_P0AE67,UniRef:UniRef50_P0AE67,UniRef:UniRef90_P0AE67,VFDB:VFC0204,VFDB:VFG043206
contig_1	Pyrodigal	gene	1856380	1857429	.	-	.	ID=GCA000010485_01837_gene;locus_tag=GCA000010485_01837;gene=cheB
contig_1	Pyrodigal	CDS	1856380	1857429	.	-	0	ID=GCA000010485_01837;Name=protein-glutamate methylesterase/protein glutamine deamidase;locus_tag=GCA000010485_01837;product=protein-glutamate methylesterase/protein glutamine deamidase;Dbxref=GO:0000156,GO:0005737,GO:0006935,GO:0008984,GO:0050568;gene=cheB;Parent=GCA000010485_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000036361,COG:COG2201,COG:T,RefSeq:WP_000036385.1,SO:0001217,UniParc:UPI00005EFA27,UniRef:UniRef100_Q0TGV0,UniRef:UniRef50_P07330,UniRef:UniRef90_P07330;ec_number=3.5.1.44
contig_1	Pyrodigal	gene	1857432	1858292	.	-	.	ID=GCA000010485_01838_gene;locus_tag=GCA000010485_01838;gene=cheR
contig_1	Pyrodigal	CDS	1857432	1858292	.	-	0	ID=GCA000010485_01838;Name=protein-glutamate O-methyltransferase CheR;locus_tag=GCA000010485_01838;product=protein-glutamate O-methyltransferase CheR;Dbxref=GO:0005829,GO:0005886,GO:0006479,GO:0006935,GO:0008276,GO:0008757,GO:0008983,GO:0098561;gene=cheR;Parent=GCA000010485_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000204324.1,SO:0001217,UniParc:UPI0001C22E35,UniRef:UniRef100_A0A7I0KPZ6,UniRef:UniRef50_P07364,UniRef:UniRef90_P07364;ec_number=2.1.1.80
contig_1	Pyrodigal	gene	1858418	1858537	.	-	.	ID=GCA000010485_01839_gene;locus_tag=GCA000010485_01839
contig_1	Pyrodigal	CDS	1858418	1858537	.	-	0	ID=GCA000010485_01839;Name=Dipeptide chemoreceptor protein;locus_tag=GCA000010485_01839;product=Dipeptide chemoreceptor protein;Parent=GCA000010485_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000176B1C0,UniRef:UniRef100_A0A061JYL7,UniRef:UniRef50_A0A2X2VLN3,UniRef:UniRef90_A0A061JYL7
contig_1	Pyrodigal	gene	1858583	1860244	.	-	.	ID=GCA000010485_01840_gene;locus_tag=GCA000010485_01840;gene=tar
contig_1	Pyrodigal	CDS	1858583	1860244	.	-	0	ID=GCA000010485_01840;Name=methyl-accepting chemotaxis protein II;locus_tag=GCA000010485_01840;product=methyl-accepting chemotaxis protein II;Dbxref=GO:0004888,GO:0005886,GO:0006935,GO:0007165,GO:0007172,GO:0009593,GO:0016020,GO:0042802,GO:0042803,GO:0043424,GO:0050920,GO:0051260,GO:0051286,GO:0071230,GO:0098561,GO:1901875;gene=tar;Parent=GCA000010485_01840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05875,RefSeq:WP_001313042.1,SO:0001217,UniParc:UPI000188742F,UniRef:UniRef100_A0A0A0H5E3,UniRef:UniRef50_P07017,UniRef:UniRef90_P07017
contig_1	Infernal	gene	1860292	1860369	.	+	.	ID=GCA000010485_01841_gene;locus_tag=GCA000010485_01841;gene=C0465
contig_1	Infernal	ncRNA	1860292	1860369	7.4e-19	+	.	ID=GCA000010485_01841;Name=C0465 RNA;locus_tag=GCA000010485_01841;product=C0465 RNA;Dbxref=RFAM:RF00116;Parent=GCA000010485_01841_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00116
contig_1	Pyrodigal	gene	1860389	1860892	.	-	.	ID=GCA000010485_01842_gene;locus_tag=GCA000010485_01842;gene=cheW
contig_1	Pyrodigal	CDS	1860389	1860892	.	-	0	ID=GCA000010485_01842;Name=chemotaxis protein CheW;locus_tag=GCA000010485_01842;product=chemotaxis protein CheW;Dbxref=GO:0005829,GO:0006935,GO:0007165;gene=cheW;Parent=GCA000010485_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0835,COG:T,KEGG:K03408,RefSeq:WP_000147302.1,SO:0001217,UniParc:UPI00001277BA,UniRef:UniRef100_P0A964,UniRef:UniRef50_P0A964,UniRef:UniRef90_P0A964
contig_1	Pyrodigal	gene	1860913	1862877	.	-	.	ID=GCA000010485_01843_gene;locus_tag=GCA000010485_01843;gene=cheA
contig_1	Pyrodigal	CDS	1860913	1862877	.	-	0	ID=GCA000010485_01843;Name=chemotaxis protein CheA;locus_tag=GCA000010485_01843;product=chemotaxis protein CheA;Dbxref=GO:0000155,GO:0000160,GO:0004673,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006935,GO:0007165,GO:0009454,GO:0016310,GO:0031400,GO:0043052,GO:0050920,GO:0051649,GO:0071977,GO:0098561,GO:1901875,GO:1902021;gene=cheA;Parent=GCA000010485_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545995.1,SO:0001217,UniParc:UPI0001C22E63,UniRef:UniRef100_A0A7I0KYK7,UniRef:UniRef50_P07363,UniRef:UniRef90_P07363;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1862882	1863808	.	-	.	ID=GCA000010485_01844_gene;locus_tag=GCA000010485_01844;gene=motB
contig_1	Pyrodigal	CDS	1862882	1863808	.	-	0	ID=GCA000010485_01844;Name=flagellar motor protein MotB;locus_tag=GCA000010485_01844;product=flagellar motor protein MotB;Dbxref=GO:0005886,GO:0006935,GO:0009288,GO:0015252,GO:0071973,GO:0120101,GO:1902600;gene=motB;Parent=GCA000010485_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000795641.1,SO:0001217,UniParc:UPI0001C22E64,UniRef:UniRef100_A0A066T9Z1,UniRef:UniRef50_P0AF06,UniRef:UniRef90_P0AF06
contig_1	Pyrodigal	gene	1863805	1864692	.	-	.	ID=GCA000010485_01845_gene;locus_tag=GCA000010485_01845;gene=motA
contig_1	Pyrodigal	CDS	1863805	1864692	.	-	0	ID=GCA000010485_01845;Name=flagellar motor stator protein MotA;locus_tag=GCA000010485_01845;product=flagellar motor stator protein MotA;Dbxref=GO:0005886,GO:0006935,GO:0009288,GO:0015252,GO:0071973,GO:0071978,GO:0120101,GO:1902600;gene=motA;Parent=GCA000010485_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1291,COG:N,KEGG:K02556,RefSeq:WP_000906342.1,SO:0001217,UniParc:UPI0000D509E1,UniRef:UniRef100_E2QN92,UniRef:UniRef50_P09348,UniRef:UniRef90_P09348
contig_1	Pyrodigal	gene	1864819	1865397	.	-	.	ID=GCA000010485_01846_gene;locus_tag=GCA000010485_01846;gene=flhC
contig_1	Pyrodigal	CDS	1864819	1865397	.	-	0	ID=GCA000010485_01846;Name=flagellar transcriptional regulator FlhC;locus_tag=GCA000010485_01846;product=flagellar transcriptional regulator FlhC;Dbxref=GO:0003677,GO:0005667,GO:0005737,GO:0006351,GO:0008270,GO:0044781,GO:0045893,GO:1902208,GO:1902210;gene=flhC;Parent=GCA000010485_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02402,RefSeq:WP_001291603.1,SO:0001217,UniParc:UPI000012A95F,UniRef:UniRef100_P0ABY7,UniRef:UniRef50_P0ABY7,UniRef:UniRef90_P0ABY7
contig_1	Pyrodigal	gene	1865400	1865750	.	-	.	ID=GCA000010485_01847_gene;locus_tag=GCA000010485_01847;gene=flhD
contig_1	Pyrodigal	CDS	1865400	1865750	.	-	0	ID=GCA000010485_01847;Name=flagellar transcriptional regulator FlhD;locus_tag=GCA000010485_01847;product=flagellar transcriptional regulator FlhD;Dbxref=GO:0003677,GO:0005737,GO:0044780,GO:0045893,GO:1902208;gene=flhD;Parent=GCA000010485_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295647.1,SO:0001217,UniParc:UPI0000113055,UniRef:UniRef100_P0A8S9,UniRef:UniRef50_P0A8S9,UniRef:UniRef90_P0A8S9
contig_1	Pyrodigal	gene	1866530	1866958	.	+	.	ID=GCA000010485_01848_gene;locus_tag=GCA000010485_01848;gene=uspC
contig_1	Pyrodigal	CDS	1866530	1866958	.	+	0	ID=GCA000010485_01848;Name=universal stress protein UspC;locus_tag=GCA000010485_01848;product=universal stress protein UspC;Dbxref=GO:0005737;gene=uspC;Parent=GCA000010485_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,KEGG:K14064,RefSeq:WP_000122413.1,SO:0001217,UniParc:UPI0001C22E65,UniRef:UniRef100_A0A061YJW3,UniRef:UniRef50_P46888,UniRef:UniRef90_P46888
contig_1	Pyrodigal	gene	1866965	1868389	.	-	.	ID=GCA000010485_01849_gene;locus_tag=GCA000010485_01849;gene=otsA
contig_1	Pyrodigal	CDS	1866965	1868389	.	-	0	ID=GCA000010485_01849;Name=alpha%2Calpha-trehalose-phosphate synthase;locus_tag=GCA000010485_01849;product=alpha%2Calpha-trehalose-phosphate synthase;Dbxref=GO:0003825,GO:0005992;gene=otsA;Parent=GCA000010485_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0380,COG:G,RefSeq:WP_001524853.1,SO:0001217,UniParc:UPI0001C22E66,UniRef:UniRef100_A0A086V237,UniRef:UniRef50_P31677,UniRef:UniRef90_P31677;ec_number=2.4.1.15
contig_1	Pyrodigal	gene	1868364	1869164	.	-	.	ID=GCA000010485_01850_gene;locus_tag=GCA000010485_01850;gene=otsB
contig_1	Pyrodigal	CDS	1868364	1869164	.	-	0	ID=GCA000010485_01850;Name=trehalose-phosphatase;locus_tag=GCA000010485_01850;product=trehalose-phosphatase;Dbxref=GO:0000287,GO:0004805,GO:0005992,GO:0006970,GO:0070415;gene=otsB;Parent=GCA000010485_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296149.1,SO:0001217,UniParc:UPI0001C22E67,UniRef:UniRef100_A0A066T1M6,UniRef:UniRef50_P31678,UniRef:UniRef90_P31678;ec_number=3.1.3.12
contig_1	Pyrodigal	gene	1869331	1870317	.	-	.	ID=GCA000010485_01851_gene;locus_tag=GCA000010485_01851;gene=araH
contig_1	Pyrodigal	CDS	1869331	1870317	.	-	0	ID=GCA000010485_01851;Name=arabinose ABC transporter permease AraH;locus_tag=GCA000010485_01851;product=arabinose ABC transporter permease AraH;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0055085;gene=araH;Parent=GCA000010485_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000100205,COG:COG1172,COG:G,RefSeq:WP_000100203.1,SO:0001217,UniParc:UPI00005F1E73,UniRef:UniRef100_J7R5I8,UniRef:UniRef50_P0AE26,UniRef:UniRef90_P0AE26;ec_number=7.5.2.12
contig_1	Pyrodigal	gene	1870332	1871846	.	-	.	ID=GCA000010485_01852_gene;locus_tag=GCA000010485_01852;gene=araG
contig_1	Pyrodigal	CDS	1870332	1871846	.	-	0	ID=GCA000010485_01852;Name=arabinose ABC transporter ATP-binding protein AraG;locus_tag=GCA000010485_01852;product=arabinose ABC transporter ATP-binding protein AraG;Dbxref=GO:0005524,GO:0005886,GO:0015612,GO:0016020,GO:0016887,GO:0042882;gene=araG;Parent=GCA000010485_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001187819,COG:COG1129,COG:G,KEGG:K10539,RefSeq:WP_001187785.1,SO:0001217,UniParc:UPI0000EADF88,UniRef:UniRef100_Q1RAN8,UniRef:UniRef50_P0AAF3,UniRef:UniRef90_P0AAF3;ec_number=7.5.2.12
contig_1	Pyrodigal	gene	1871916	1872905	.	-	.	ID=GCA000010485_01853_gene;locus_tag=GCA000010485_01853;gene=araF
contig_1	Pyrodigal	CDS	1871916	1872905	.	-	0	ID=GCA000010485_01853;Name=arabinose ABC transporter substrate-binding protein AraF;locus_tag=GCA000010485_01853;product=arabinose ABC transporter substrate-binding protein AraF;Dbxref=GO:0015407,GO:0016020,GO:0030246,GO:0030288,GO:0042882,GO:0048029,GO:0055052;gene=araF;Parent=GCA000010485_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000548675,COG:COG1879,COG:G,KEGG:K10537,RefSeq:WP_000548680.1,SO:0001217,UniParc:UPI00000D04AE,UniRef:UniRef100_C3T5A2,UniRef:UniRef50_P02924,UniRef:UniRef90_P02924
contig_1	Pyrodigal	gene	1873702	1874205	.	+	.	ID=GCA000010485_01854_gene;locus_tag=GCA000010485_01854;gene=ftnB
contig_1	Pyrodigal	CDS	1873702	1874205	.	+	0	ID=GCA000010485_01854;Name=non-heme ferritin-like protein;locus_tag=GCA000010485_01854;product=non-heme ferritin-like protein;Dbxref=GO:0005737,GO:0008199;gene=ftnB;Parent=GCA000010485_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,KEGG:K02255,RefSeq:WP_000179470.1,SO:0001217,UniParc:UPI0001C22E68,UniRef:UniRef100_A0A7I0KYL8,UniRef:UniRef50_P0A9A2,UniRef:UniRef90_P0A9A2
contig_1	Pyrodigal	gene	1874283	1874534	.	-	.	ID=GCA000010485_01855_gene;locus_tag=GCA000010485_01855;gene=yecJ
contig_1	Pyrodigal	CDS	1874283	1874534	.	-	0	ID=GCA000010485_01855;Name=putative protein YecJ;locus_tag=GCA000010485_01855;product=putative protein YecJ;gene=yecJ;Parent=GCA000010485_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000082125.1,SO:0001217,UniParc:UPI0001C22E69,UniRef:UniRef100_A0A3H9KSS6,UniRef:UniRef50_P0AD10,UniRef:UniRef90_P0AD10
contig_1	Bakta	gene	1874649	1874735	.	-	.	ID=GCA000010485_01856_gene;locus_tag=GCA000010485_01856;inference=ab initio prediction:Bakta;gene=azuC
contig_1	Bakta	CDS	1874649	1874735	.	-	0	ID=GCA000010485_01856;Name=stress response protein AzuC;locus_tag=GCA000010485_01856;product=stress response protein AzuC;Dbxref=GO:0005886,GO:0008047;gene=azuC;Parent=GCA000010485_01856_gene;Note=RefSeq:WP_010723106.1,SO:0001217,UniParc:UPI000199A543,UniRef:UniRef100_C1P605,UniRef:UniRef50_C1P605,UniRef:UniRef90_C1P605
contig_1	Pyrodigal	gene	1874999	1875322	.	+	.	ID=GCA000010485_01857_gene;locus_tag=GCA000010485_01857;gene=yecR
contig_1	Pyrodigal	CDS	1874999	1875322	.	+	0	ID=GCA000010485_01857;Name=putative protein YecR;locus_tag=GCA000010485_01857;product=putative protein YecR;gene=yecR;Parent=GCA000010485_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001237881.1,SO:0001217,UniParc:UPI00000DECAD,UniRef:UniRef100_E2QNA3,UniRef:UniRef50_P76308,UniRef:UniRef90_P76308
contig_1	Pyrodigal	gene	1875494	1875991	.	+	.	ID=GCA000010485_01858_gene;locus_tag=GCA000010485_01858;gene=ftnA
contig_1	Pyrodigal	CDS	1875494	1875991	.	+	0	ID=GCA000010485_01858;Name=non-heme ferritin;locus_tag=GCA000010485_01858;product=non-heme ferritin;Dbxref=GO:0004322,GO:0005737,GO:0005829,GO:0006826,GO:0006879,GO:0006974,GO:0006979,GO:0008198,GO:0008199,GO:0042802,GO:0071281,GO:0140315;gene=ftnA;Parent=GCA000010485_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,RefSeq:WP_000917208.1,SO:0001217,UniParc:UPI0000111424,UniRef:UniRef100_P0A998,UniRef:UniRef50_P0A998,UniRef:UniRef90_P0A998;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	1876029	1876268	.	-	.	ID=GCA000010485_01859_gene;locus_tag=GCA000010485_01859
contig_1	Pyrodigal	CDS	1876029	1876268	.	-	0	ID=GCA000010485_01859;Name=Protein;locus_tag=GCA000010485_01859;product=Protein;Parent=GCA000010485_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000377224.1,SO:0001217,UniParc:UPI00000D04B1,UniRef:UniRef100_C3T577,UniRef:UniRef50_P46887,UniRef:UniRef90_C3T577
contig_1	Pyrodigal	gene	1876459	1877670	.	+	.	ID=GCA000010485_01860_gene;locus_tag=GCA000010485_01860;gene=tyrP
contig_1	Pyrodigal	CDS	1876459	1877670	.	+	0	ID=GCA000010485_01860;Name=tyrosine transporter TyrP;locus_tag=GCA000010485_01860;product=tyrosine transporter TyrP;Dbxref=GO:0003333,GO:0005886,GO:0015173,GO:0015293,GO:0015801;gene=tyrP;Parent=GCA000010485_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_000797555.1,SO:0001217,UniParc:UPI00000DECB0,UniRef:UniRef100_E2QNA6,UniRef:UniRef50_P0AAD4,UniRef:UniRef90_P0AAD4
contig_1	Pyrodigal	gene	1877721	1878386	.	-	.	ID=GCA000010485_01861_gene;locus_tag=GCA000010485_01861;gene=yecA
contig_1	Pyrodigal	CDS	1877721	1878386	.	-	0	ID=GCA000010485_01861;Name=UPF0149 family protein YecA;locus_tag=GCA000010485_01861;product=UPF0149 family protein YecA;Dbxref=GO:0005506;gene=yecA;Parent=GCA000010485_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000847902,COG:COG3318,COG:S,RefSeq:WP_000847877.1,SO:0001217,UniParc:UPI000187BB8D,UniRef:UniRef100_A0A0K5LM73,UniRef:UniRef50_P0AD05,UniRef:UniRef90_P0AD05
contig_1	tRNAscan-SE	gene	1878582	1878668	.	-	.	ID=GCA000010485_01862_gene;locus_tag=GCA000010485_01862;gene=trnL
contig_1	tRNAscan-SE	tRNA	1878582	1878668	.	-	.	ID=GCA000010485_01862;Name=tRNA-Leu(taa);locus_tag=GCA000010485_01862;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000010485_01862_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1878681	1878754	.	-	.	ID=GCA000010485_01863_gene;locus_tag=GCA000010485_01863;gene=trnC
contig_1	tRNAscan-SE	tRNA	1878681	1878754	.	-	.	ID=GCA000010485_01863;Name=tRNA-Cys(gca);locus_tag=GCA000010485_01863;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000010485_01863_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	1878808	1878883	.	-	.	ID=GCA000010485_01864_gene;locus_tag=GCA000010485_01864;gene=trnG
contig_1	tRNAscan-SE	tRNA	1878808	1878883	.	-	.	ID=GCA000010485_01864;Name=tRNA-Gly(gcc);locus_tag=GCA000010485_01864;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000010485_01864_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	1879035	1879583	.	-	.	ID=GCA000010485_01865_gene;locus_tag=GCA000010485_01865;gene=pgsA
contig_1	Pyrodigal	CDS	1879035	1879583	.	-	0	ID=GCA000010485_01865;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;locus_tag=GCA000010485_01865;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;Dbxref=GO:0005886,GO:0006655,GO:0008444;gene=pgsA;Parent=GCA000010485_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,RefSeq:WP_001160187.1,SO:0001217,UniParc:UPI0000165486,UniRef:UniRef100_P0ABF8,UniRef:UniRef50_P0ABF8,UniRef:UniRef90_P0ABF8;ec_number=2.7.8.5
contig_1	Pyrodigal	gene	1879640	1881472	.	-	.	ID=GCA000010485_01866_gene;locus_tag=GCA000010485_01866;gene=uvrC
contig_1	Pyrodigal	CDS	1879640	1881472	.	-	0	ID=GCA000010485_01866;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000010485_01866;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432;gene=uvrC;Parent=GCA000010485_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_001283421.1,SO:0001217,UniParc:UPI000000E96F,UniRef:UniRef100_P0A8G0,UniRef:UniRef50_P0A8G0,UniRef:UniRef90_P0A8G0
contig_1	Pyrodigal	gene	1881469	1882125	.	-	.	ID=GCA000010485_01867_gene;locus_tag=GCA000010485_01867;gene=uvrY
contig_1	Pyrodigal	CDS	1881469	1882125	.	-	0	ID=GCA000010485_01867;Name=UvrY/SirA/GacA family response regulator transcription factor;locus_tag=GCA000010485_01867;product=UvrY/SirA/GacA family response regulator transcription factor;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=uvrY;Parent=GCA000010485_01867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07689,RefSeq:WP_000611328.1,SO:0001217,UniParc:UPI0000137F04,UniRef:UniRef100_P66798,UniRef:UniRef50_P0AED5,UniRef:UniRef90_P0AED5
contig_1	Pyrodigal	gene	1882584	1882808	.	+	.	ID=GCA000010485_01868_gene;locus_tag=GCA000010485_01868;gene=yecF
contig_1	Pyrodigal	CDS	1882584	1882808	.	+	0	ID=GCA000010485_01868;Name=DUF2594 domain-containing protein;locus_tag=GCA000010485_01868;product=DUF2594 domain-containing protein;gene=yecF;Parent=GCA000010485_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000106474.1,SO:0001217,UniParc:UPI000013ABE0,UniRef:UniRef100_P0AD07,UniRef:UniRef50_P0AD07,UniRef:UniRef90_P0AD07
contig_1	Pyrodigal	gene	1882876	1883598	.	-	.	ID=GCA000010485_01869_gene;locus_tag=GCA000010485_01869;gene=sdiA
contig_1	Pyrodigal	CDS	1882876	1883598	.	-	0	ID=GCA000010485_01869;Name=transcriptional regulator SdiA;locus_tag=GCA000010485_01869;product=transcriptional regulator SdiA;Dbxref=GO:0003677,GO:0006355,GO:0051301,GO:2000144;gene=sdiA;Parent=GCA000010485_01869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07782,RefSeq:WP_001154255.1,SO:0001217,UniParc:UPI00005EFAEB,UniRef:UniRef100_E2QNB2,UniRef:UniRef50_P07026,UniRef:UniRef90_P07026
contig_1	Pyrodigal	gene	1883828	1884580	.	-	.	ID=GCA000010485_01870_gene;locus_tag=GCA000010485_01870;gene=tcyN
contig_1	Pyrodigal	CDS	1883828	1884580	.	-	0	ID=GCA000010485_01870;Name=L-cystine ABC transporter ATP-binding protein TcyN;locus_tag=GCA000010485_01870;product=L-cystine ABC transporter ATP-binding protein TcyN;Dbxref=GO:0003333,GO:0005524,GO:0005886,GO:0015184,GO:0015424,GO:0015811,GO:0016887,GO:0055052,GO:1903712;gene=tcyN;Parent=GCA000010485_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_001273000.1,SO:0001217,UniParc:UPI00000DECB3,UniRef:UniRef100_E2QNB3,UniRef:UniRef50_P37774,UniRef:UniRef90_P37774;ec_number=7.4.2.12
contig_1	Pyrodigal	gene	1884577	1885245	.	-	.	ID=GCA000010485_01871_gene;locus_tag=GCA000010485_01871;gene=tcyL
contig_1	Pyrodigal	CDS	1884577	1885245	.	-	0	ID=GCA000010485_01871;Name=cystine ABC transporter permease;locus_tag=GCA000010485_01871;product=cystine ABC transporter permease;Dbxref=GO:0015184,GO:0043190;gene=tcyL;Parent=GCA000010485_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,RefSeq:WP_001158220.1,SO:0001217,UniParc:UPI000013ABED,UniRef:UniRef100_P0AFT2,UniRef:UniRef50_P0AFT2,UniRef:UniRef90_P0AFT2;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1885260	1886246	.	-	.	ID=GCA000010485_01872_gene;locus_tag=GCA000010485_01872;gene=dcyD
contig_1	Pyrodigal	CDS	1885260	1886246	.	-	0	ID=GCA000010485_01872;Name=D-cysteine desulfhydrase;locus_tag=GCA000010485_01872;product=D-cysteine desulfhydrase;Dbxref=GO:0019148,GO:0046416;gene=dcyD;Parent=GCA000010485_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2515,COG:E,RefSeq:WP_001128215.1,SO:0001217,UniParc:UPI00001B5118,UniRef:UniRef100_P76316,UniRef:UniRef50_P76316,UniRef:UniRef90_P76316;ec_number=4.4.1.15
contig_1	Pyrodigal	gene	1886351	1887208	.	-	.	ID=GCA000010485_01873_gene;locus_tag=GCA000010485_01873;gene=tcyJ
contig_1	Pyrodigal	CDS	1886351	1887208	.	-	0	ID=GCA000010485_01873;Name=cystine ABC transporter substrate-binding protein;locus_tag=GCA000010485_01873;product=cystine ABC transporter substrate-binding protein;Dbxref=GO:0006791,GO:0015184,GO:0015276,GO:0015811,GO:0015830,GO:0016020,GO:0016597,GO:0030288,GO:0055052,GO:1903712;gene=tcyJ;Parent=GCA000010485_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,SO:0001217,UniParc:UPI0000167DBB,UniRef:UniRef100_P0AEM9,UniRef:UniRef50_P0AEM9,UniRef:UniRef90_P0AEM9
contig_1	Pyrodigal	gene	1887239	1887790	.	-	.	ID=GCA000010485_01874_gene;locus_tag=GCA000010485_01874;gene=fliZ
contig_1	Pyrodigal	CDS	1887239	1887790	.	-	0	ID=GCA000010485_01874;Name=flagella biosynthesis regulatory protein FliZ;locus_tag=GCA000010485_01874;product=flagella biosynthesis regulatory protein FliZ;Dbxref=GO:0001046,GO:0015074,GO:0016989,GO:1902021;gene=fliZ;Parent=GCA000010485_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02425,RefSeq:WP_001545997.1,SO:0001217,UniParc:UPI0002A28A45,UniRef:UniRef100_A0A7I0KQ21,UniRef:UniRef50_P52627,UniRef:UniRef90_P52627
contig_1	Pyrodigal	gene	1887836	1888555	.	-	.	ID=GCA000010485_01875_gene;locus_tag=GCA000010485_01875;gene=fliA
contig_1	Pyrodigal	CDS	1887836	1888555	.	-	0	ID=GCA000010485_01875;Name=RNA polymerase sigma factor FliA;locus_tag=GCA000010485_01875;product=RNA polymerase sigma factor FliA;gene=fliA;Parent=GCA000010485_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001087467,COG:COG1191,COG:K,KEGG:K02405,RefSeq:WP_001087463.1,SO:0001217,UniParc:UPI00005F2E0E,UniRef:UniRef100_G5CKA5,UniRef:UniRef50_P0AEM6,UniRef:UniRef90_Q32HE9
contig_1	Pyrodigal	gene	1888874	1890184	.	-	.	ID=GCA000010485_01876_gene;locus_tag=GCA000010485_01876
contig_1	Pyrodigal	CDS	1888874	1890184	.	-	0	ID=GCA000010485_01876;Name=Flagellin;locus_tag=GCA000010485_01876;product=Flagellin;Parent=GCA000010485_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02406,RefSeq:WP_000079768.1,SO:0001217,UniParc:UPI0001C22E6C,UniRef:UniRef100_A0A3Z8SAW2,UniRef:UniRef50_P06179,UniRef:UniRef90_Q9S0T9
contig_1	Pyrodigal	gene	1890432	1891847	.	+	.	ID=GCA000010485_01877_gene;locus_tag=GCA000010485_01877;gene=fliD
contig_1	Pyrodigal	CDS	1890432	1891847	.	+	0	ID=GCA000010485_01877;Name=flagellar filament capping protein FliD;locus_tag=GCA000010485_01877;product=flagellar filament capping protein FliD;Dbxref=GO:0007155,GO:0009288,GO:0009421;gene=fliD;Parent=GCA000010485_01877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02407,RefSeq:WP_000146830.1,SO:0001217,UniParc:UPI00005F160D,UniRef:UniRef100_A0A246W4J2,UniRef:UniRef50_P24216,UniRef:UniRef90_A0A0E0Y151
contig_1	Pyrodigal	gene	1891863	1892273	.	+	.	ID=GCA000010485_01878_gene;locus_tag=GCA000010485_01878;gene=fliS
contig_1	Pyrodigal	CDS	1891863	1892273	.	+	0	ID=GCA000010485_01878;Name=flagellar export chaperone FliS;locus_tag=GCA000010485_01878;product=flagellar export chaperone FliS;Dbxref=GO:0005829,GO:0044780,GO:0071973;gene=fliS;Parent=GCA000010485_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1516,COG:NU,KEGG:K02422,RefSeq:WP_000270663.1,SO:0001217,UniParc:UPI00000DECB6,UniRef:UniRef100_E2QNC1,UniRef:UniRef50_P26609,UniRef:UniRef90_P26608
contig_1	Pyrodigal	gene	1892273	1892638	.	+	.	ID=GCA000010485_01879_gene;locus_tag=GCA000010485_01879;gene=fliT
contig_1	Pyrodigal	CDS	1892273	1892638	.	+	0	ID=GCA000010485_01879;Name=flagella biosynthesis regulatory protein FliT;locus_tag=GCA000010485_01879;product=flagella biosynthesis regulatory protein FliT;Dbxref=GO:0005829,GO:0006457,GO:0006605,GO:0044780,GO:0044781,GO:1902209;gene=fliT;Parent=GCA000010485_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001057840.1,SO:0001217,UniParc:UPI00005F160E,UniRef:UniRef100_A8A1C8,UniRef:UniRef50_P0ABY2,UniRef:UniRef90_P0ABY2
contig_1	Pyrodigal	gene	1892716	1894203	.	+	.	ID=GCA000010485_01880_gene;locus_tag=GCA000010485_01880;gene=amyA
contig_1	Pyrodigal	CDS	1892716	1894203	.	+	0	ID=GCA000010485_01880;Name=alpha-amylase;locus_tag=GCA000010485_01880;product=alpha-amylase;Dbxref=GO:0004553,GO:0004556,GO:0005509,GO:0005737,GO:0005975;gene=amyA;Parent=GCA000010485_01880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,KEGG:K01176,RefSeq:WP_001245702.1,SO:0001217,UniParc:UPI0001C22E6D,UniRef:UniRef100_A0A641DYG0,UniRef:UniRef50_P26612,UniRef:UniRef90_P26612;ec_number=3.2.1.1
contig_1	Pyrodigal	gene	1894237	1894650	.	-	.	ID=GCA000010485_01881_gene;locus_tag=GCA000010485_01881;gene=yedD
contig_1	Pyrodigal	CDS	1894237	1894650	.	-	0	ID=GCA000010485_01881;Name=lipoprotein YedD;locus_tag=GCA000010485_01881;product=lipoprotein YedD;Dbxref=GO:0005886;gene=yedD;Parent=GCA000010485_01881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295642.1,SO:0001217,UniParc:UPI00000D05F2,UniRef:UniRef100_C3T502,UniRef:UniRef50_P31063,UniRef:UniRef90_P31063
contig_1	Pyrodigal	gene	1894837	1896042	.	+	.	ID=GCA000010485_01882_gene;locus_tag=GCA000010485_01882;gene=yedE
contig_1	Pyrodigal	CDS	1894837	1896042	.	+	0	ID=GCA000010485_01882;Name=selenium metabolism membrane protein YedE/FdhT;locus_tag=GCA000010485_01882;product=selenium metabolism membrane protein YedE/FdhT;Dbxref=GO:0005886;gene=yedE;Parent=GCA000010485_01882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2391,COG:R,KEGG:K07112,RefSeq:WP_000118902.1,SO:0001217,UniParc:UPI0001C22E6E,UniRef:UniRef100_A0A7I0KQ68,UniRef:UniRef50_P31064,UniRef:UniRef90_P31064
contig_1	Pyrodigal	gene	1896039	1896272	.	+	.	ID=GCA000010485_01883_gene;locus_tag=GCA000010485_01883;gene=yedF
contig_1	Pyrodigal	CDS	1896039	1896272	.	+	0	ID=GCA000010485_01883;Name=sulfurtransferase-like selenium metabolism protein YedF;locus_tag=GCA000010485_01883;product=sulfurtransferase-like selenium metabolism protein YedF;gene=yedF;Parent=GCA000010485_01883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000790495.1,SO:0001217,UniParc:UPI0001C22E6F,UniRef:UniRef100_A0A7I0KRH7,UniRef:UniRef50_A0A1B8SNF9,UniRef:UniRef90_A0A7I0KRH7
contig_1	Pyrodigal	gene	1896760	1897029	.	-	.	ID=GCA000010485_01884_gene;locus_tag=GCA000010485_01884
contig_1	Pyrodigal	CDS	1896760	1897029	.	-	0	ID=GCA000010485_01884;Name=Transposase;locus_tag=GCA000010485_01884;product=Transposase;Parent=GCA000010485_01884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2S5KIX4,UniRef:UniRef90_A0A4C7B312
contig_1	Pyrodigal	gene	1897793	1898590	.	-	.	ID=GCA000010485_01885_gene;locus_tag=GCA000010485_01885;gene=ybcM
contig_1	Pyrodigal	CDS	1897793	1898590	.	-	0	ID=GCA000010485_01885;Name=putative HTH-type transcriptional regulator YbcM;locus_tag=GCA000010485_01885;product=putative HTH-type transcriptional regulator YbcM;Dbxref=GO:0000976,GO:0003700,GO:0006974,GO:0046677;gene=ybcM;Parent=GCA000010485_01885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000879825.1,SO:0001217,UniParc:UPI00015C4FA5,UniRef:UniRef100_A0A234YD59,UniRef:UniRef50_P77634,UniRef:UniRef90_P77634
contig_1	Pyrodigal	gene	1898600	1899151	.	-	.	ID=GCA000010485_01886_gene;locus_tag=GCA000010485_01886;gene=ybcL
contig_1	Pyrodigal	CDS	1898600	1899151	.	-	0	ID=GCA000010485_01886;Name=Raf kinase inhibitor-like protein YbcL;locus_tag=GCA000010485_01886;product=Raf kinase inhibitor-like protein YbcL;Dbxref=GO:0030288;gene=ybcL;Parent=GCA000010485_01886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001306955,RefSeq:WP_001310919.1,SO:0001217,UniParc:UPI00015C4FA6,UniRef:UniRef100_A0A0A2R7B6,UniRef:UniRef50_P77368,UniRef:UniRef90_P77368
contig_1	Pyrodigal	gene	1899320	1899652	.	-	.	ID=GCA000010485_01887_gene;locus_tag=GCA000010485_01887;gene=emrE
contig_1	Pyrodigal	CDS	1899320	1899652	.	-	0	ID=GCA000010485_01887;Name=multidrug efflux SMR transporter EmrE;locus_tag=GCA000010485_01887;product=multidrug efflux SMR transporter EmrE;gene=emrE;Parent=GCA000010485_01887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001070439,KEGG:K03297,NCBIProtein:CAA77936.1,RefSeq:WP_001070440.1,SO:0001217,UniParc:UPI000000E30B,UniRef:UniRef100_A0A0J3Y8H0,UniRef:UniRef50_P23895,UniRef:UniRef90_A0A0J3Y8H0
contig_1	Pyrodigal	gene	1899996	1900310	.	-	.	ID=GCA000010485_01888_gene;locus_tag=GCA000010485_01888;gene=fliE
contig_1	Pyrodigal	CDS	1899996	1900310	.	-	0	ID=GCA000010485_01888;Name=flagellar hook-basal body complex protein FliE;locus_tag=GCA000010485_01888;product=flagellar hook-basal body complex protein FliE;Dbxref=GO:0003774,GO:0005198,GO:0009425,GO:0009431,GO:0071973;gene=fliE;Parent=GCA000010485_01888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02408,RefSeq:WP_001274299.1,SO:0001217,UniParc:UPI000016548B,UniRef:UniRef100_P0A8T5,UniRef:UniRef50_P0A8T5,UniRef:UniRef90_P0A8T5
contig_1	Pyrodigal	gene	1900525	1902183	.	+	.	ID=GCA000010485_01889_gene;locus_tag=GCA000010485_01889;gene=fliF
contig_1	Pyrodigal	CDS	1900525	1902183	.	+	0	ID=GCA000010485_01889;Name=flagellar basal-body MS-ring/collar protein FliF;locus_tag=GCA000010485_01889;product=flagellar basal-body MS-ring/collar protein FliF;Dbxref=GO:0001539,GO:0003774,GO:0005198,GO:0005829,GO:0005886,GO:0009431,GO:0030288,GO:0071973;gene=fliF;Parent=GCA000010485_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02409,RefSeq:WP_000994422.1,SO:0001217,UniParc:UPI0001C22EA0,UniRef:UniRef100_A0A7I0KQ09,UniRef:UniRef50_P15928,UniRef:UniRef90_P25798
contig_1	Pyrodigal	gene	1902176	1903171	.	+	.	ID=GCA000010485_01890_gene;locus_tag=GCA000010485_01890;gene=fliG
contig_1	Pyrodigal	CDS	1902176	1903171	.	+	0	ID=GCA000010485_01890;Name=flagellar motor switch protein FliG;locus_tag=GCA000010485_01890;product=flagellar motor switch protein FliG;Dbxref=GO:0003774,GO:0005886,GO:0006935,GO:0009288,GO:0009425,GO:0071973;gene=fliG;Parent=GCA000010485_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1536,COG:N,KEGG:K02410,RefSeq:WP_000067950.1,SO:0001217,UniParc:UPI000012A9AF,UniRef:UniRef100_P0ABZ1,UniRef:UniRef50_P0ABZ1,UniRef:UniRef90_P0ABZ1
contig_1	Pyrodigal	gene	1903164	1903850	.	+	.	ID=GCA000010485_01891_gene;locus_tag=GCA000010485_01891;gene=fliH
contig_1	Pyrodigal	CDS	1903164	1903850	.	+	0	ID=GCA000010485_01891;Name=flagellar assembly protein FliH;locus_tag=GCA000010485_01891;product=flagellar assembly protein FliH;Dbxref=GO:0003774,GO:0005829,GO:0006935,GO:0009288,GO:0030254,GO:0030257,GO:0044781,GO:0071973,GO:0120102;gene=fliH;Parent=GCA000010485_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02411,RefSeq:WP_001282656.1,SO:0001217,UniParc:UPI0001C22EA1,UniRef:UniRef100_A0A7I0KQ07,UniRef:UniRef50_P31068,UniRef:UniRef90_P31068
contig_1	Pyrodigal	gene	1903850	1905223	.	+	.	ID=GCA000010485_01892_gene;locus_tag=GCA000010485_01892;gene=fliI
contig_1	Pyrodigal	CDS	1903850	1905223	.	+	0	ID=GCA000010485_01892;Name=flagellar protein export ATPase FliI;locus_tag=GCA000010485_01892;product=flagellar protein export ATPase FliI;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0030254,GO:0030257,GO:0042802,GO:0044780,GO:0045261,GO:0046933,GO:0046961,GO:0071973;gene=fliI;Parent=GCA000010485_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1157,COG:NU,KEGG:K02412,RefSeq:WP_000213294.1,SO:0001217,UniParc:UPI000012A9BC,UniRef:UniRef100_P52612,UniRef:UniRef50_P26465,UniRef:UniRef90_P26465;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1905242	1905685	.	+	.	ID=GCA000010485_01893_gene;locus_tag=GCA000010485_01893;gene=fliJ
contig_1	Pyrodigal	CDS	1905242	1905685	.	+	0	ID=GCA000010485_01893;Name=flagellar export protein FliJ;locus_tag=GCA000010485_01893;product=flagellar export protein FliJ;Dbxref=GO:0003774,GO:0005886,GO:0006935,GO:0009288,GO:0030254,GO:0030257,GO:0044781,GO:0071973,GO:0120102;gene=fliJ;Parent=GCA000010485_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000807584.1,SO:0001217,UniParc:UPI00000D05F9,UniRef:UniRef100_C3T4V2,UniRef:UniRef50_P52613,UniRef:UniRef90_P52613
contig_1	Pyrodigal	gene	1905682	1906809	.	+	.	ID=GCA000010485_01894_gene;locus_tag=GCA000010485_01894;gene=fliK
contig_1	Pyrodigal	CDS	1905682	1906809	.	+	0	ID=GCA000010485_01894;Name=Flagellar hook-length control protein;locus_tag=GCA000010485_01894;product=Flagellar hook-length control protein;Dbxref=GO:0009424,GO:0044780,GO:0071973;gene=fliK;Parent=GCA000010485_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02414,RefSeq:WP_000620087.1,SO:0001217,UniParc:UPI0001C22EA2,UniRef:UniRef100_A0A7I0KQ45,UniRef:UniRef50_P52614,UniRef:UniRef90_P52614
contig_1	Pyrodigal	gene	1906914	1907378	.	+	.	ID=GCA000010485_01895_gene;locus_tag=GCA000010485_01895;gene=fliL
contig_1	Pyrodigal	CDS	1906914	1907378	.	+	0	ID=GCA000010485_01895;Name=flagellar basal body-associated protein FliL;locus_tag=GCA000010485_01895;product=flagellar basal body-associated protein FliL;Dbxref=GO:0005886,GO:0006935,GO:0009425,GO:0071973,GO:0071978;gene=fliL;Parent=GCA000010485_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02415,RefSeq:WP_000133106.1,SO:0001217,UniParc:UPI000012A9CA,UniRef:UniRef100_P0ABX8,UniRef:UniRef50_P0ABX8,UniRef:UniRef90_P0ABX8
contig_1	Pyrodigal	gene	1907383	1908387	.	+	.	ID=GCA000010485_01896_gene;locus_tag=GCA000010485_01896;gene=fliM
contig_1	Pyrodigal	CDS	1907383	1908387	.	+	0	ID=GCA000010485_01896;Name=flagellar motor switch protein FliM;locus_tag=GCA000010485_01896;product=flagellar motor switch protein FliM;Dbxref=GO:0001539,GO:0003774,GO:0005886,GO:0009288,GO:0009425,GO:0050918,GO:0071978;gene=fliM;Parent=GCA000010485_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1868,COG:N,RefSeq:WP_001295641.1,SO:0001217,UniParc:UPI00000D0D33,UniRef:UniRef100_C3T4T7,UniRef:UniRef50_P06974,UniRef:UniRef90_P06974
contig_1	Pyrodigal	gene	1908384	1908797	.	+	.	ID=GCA000010485_01897_gene;locus_tag=GCA000010485_01897;gene=fliN
contig_1	Pyrodigal	CDS	1908384	1908797	.	+	0	ID=GCA000010485_01897;Name=Flagellar motor switch protein FliN;locus_tag=GCA000010485_01897;product=Flagellar motor switch protein FliN;gene=fliN;Parent=GCA000010485_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001282103.1,SO:0001217,UniParc:UPI0001C22EA3,UniRef:UniRef100_A0A061YA16,UniRef:UniRef50_P15070,UniRef:UniRef90_A0A658Z1K5
contig_1	Pyrodigal	gene	1908800	1909165	.	+	.	ID=GCA000010485_01898_gene;locus_tag=GCA000010485_01898;gene=fliO
contig_1	Pyrodigal	CDS	1908800	1909165	.	+	0	ID=GCA000010485_01898;Name=flagellar biosynthetic protein FliO;locus_tag=GCA000010485_01898;product=flagellar biosynthetic protein FliO;Dbxref=GO:0005886,GO:0006935,GO:0009288,GO:0016020,GO:0030254,GO:0030257,GO:0044781,GO:0071973,GO:0120102;gene=fliO;Parent=GCA000010485_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001313947.1,SO:0001217,UniParc:UPI0001E8AA22,UniRef:UniRef100_A0A066T1I6,UniRef:UniRef50_P22586,UniRef:UniRef90_P22586
contig_1	Pyrodigal	gene	1909165	1909902	.	+	.	ID=GCA000010485_01899_gene;locus_tag=GCA000010485_01899;gene=fliP
contig_1	Pyrodigal	CDS	1909165	1909902	.	+	0	ID=GCA000010485_01899;Name=flagellar type III secretion system pore protein FliP;locus_tag=GCA000010485_01899;product=flagellar type III secretion system pore protein FliP;Dbxref=GO:0005886,GO:0006935,GO:0009288,GO:0009306,GO:0016020,GO:0030254,GO:0030257,GO:0044781,GO:0071973,GO:0120102;gene=fliP;Parent=GCA000010485_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001253410,KEGG:K02419,RefSeq:WP_001253318.1,SO:0001217,UniParc:UPI00000E4A1D,UniRef:UniRef100_E2QNE2,UniRef:UniRef50_P0AC05,UniRef:UniRef90_P0AC05
contig_1	Pyrodigal	gene	1909912	1910181	.	+	.	ID=GCA000010485_01900_gene;locus_tag=GCA000010485_01900;gene=fliQ
contig_1	Pyrodigal	CDS	1909912	1910181	.	+	0	ID=GCA000010485_01900;Name=flagellar biosynthesis protein FliQ;locus_tag=GCA000010485_01900;product=flagellar biosynthesis protein FliQ;Dbxref=GO:0005886,GO:0009306,GO:0009425,GO:0016020,GO:0044780;gene=fliQ;Parent=GCA000010485_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1987,COG:N,KEGG:K02420,RefSeq:WP_000187358.1,SO:0001217,UniParc:UPI000012A9E9,UniRef:UniRef100_P0AC07,UniRef:UniRef50_P0AC07,UniRef:UniRef90_P0AC07
contig_1	Pyrodigal	gene	1910190	1910975	.	+	.	ID=GCA000010485_01901_gene;locus_tag=GCA000010485_01901;gene=fliR
contig_1	Pyrodigal	CDS	1910190	1910975	.	+	0	ID=GCA000010485_01901;Name=flagellar biosynthetic protein FliR;locus_tag=GCA000010485_01901;product=flagellar biosynthetic protein FliR;Dbxref=GO:0005886,GO:0006605,GO:0006935,GO:0009288,GO:0016020,GO:0030254,GO:0030257,GO:0044780,GO:0071973,GO:0120102;gene=fliR;Parent=GCA000010485_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02421,RefSeq:WP_000983988.1,SO:0001217,UniParc:UPI00000DECC5,UniRef:UniRef100_E2QNE4,UniRef:UniRef50_P33135,UniRef:UniRef90_P33135
contig_1	Pyrodigal	gene	1911265	1911888	.	+	.	ID=GCA000010485_01902_gene;locus_tag=GCA000010485_01902;gene=rcsA
contig_1	Pyrodigal	CDS	1911265	1911888	.	+	0	ID=GCA000010485_01902;Name=transcriptional regulator RcsA;locus_tag=GCA000010485_01902;product=transcriptional regulator RcsA;Dbxref=GO:0003677,GO:0006355;gene=rcsA;Parent=GCA000010485_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07781,RefSeq:WP_000103980.1,SO:0001217,UniParc:UPI0001C22EA5,UniRef:UniRef100_A0A7I0KQ86,UniRef:UniRef50_P0DMC9,UniRef:UniRef90_P0DMC9
contig_1	Pyrodigal	gene	1911932	1912120	.	-	.	ID=GCA000010485_01903_gene;locus_tag=GCA000010485_01903;gene=dsrB
contig_1	Pyrodigal	CDS	1911932	1912120	.	-	0	ID=GCA000010485_01903;Name=protein DsrB;locus_tag=GCA000010485_01903;product=protein DsrB;gene=dsrB;Parent=GCA000010485_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000867217.1,SO:0001217,UniParc:UPI0000129917,UniRef:UniRef100_P0AEG8,UniRef:UniRef50_P0AEG8,UniRef:UniRef90_P0AEG8
contig_1	Pyrodigal	gene	1912283	1912510	.	+	.	ID=GCA000010485_01904_gene;locus_tag=GCA000010485_01904;gene=yodD
contig_1	Pyrodigal	CDS	1912283	1912510	.	+	0	ID=GCA000010485_01904;Name=YodD family peroxide/acid resistance protein;locus_tag=GCA000010485_01904;product=YodD family peroxide/acid resistance protein;Dbxref=GO:0044011,GO:0070301,GO:0071468;gene=yodD;Parent=GCA000010485_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000844800,RefSeq:WP_000844800.1,SO:0001217,UniParc:UPI000013BC6E,UniRef:UniRef100_P64519,UniRef:UniRef50_P64519,UniRef:UniRef90_P64519
contig_1	Infernal	gene	1912524	1912610	.	-	.	ID=GCA000010485_01905_gene;locus_tag=GCA000010485_01905;gene=dsrA
contig_1	Infernal	ncRNA	1912524	1912610	1.4e-18	-	.	ID=GCA000010485_01905;Name=DsrA RNA;locus_tag=GCA000010485_01905;gene=dsrA;product=DsrA RNA;Dbxref=RFAM:RF00014;Parent=GCA000010485_01905_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00014
contig_1	Pyrodigal	gene	1912808	1913623	.	+	.	ID=GCA000010485_01906_gene;locus_tag=GCA000010485_01906;gene=yedP
contig_1	Pyrodigal	CDS	1912808	1913623	.	+	0	ID=GCA000010485_01906;Name=mannosyl-3-phosphoglycerate phosphatase-related protein;locus_tag=GCA000010485_01906;product=mannosyl-3-phosphoglycerate phosphatase-related protein;Dbxref=GO:0000287,GO:0005829,GO:0050531,GO:0051479;gene=yedP;Parent=GCA000010485_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3769,COG:G,KEGG:K07026,RefSeq:WP_000491480.1,SO:0001217,UniParc:UPI0001887F59,UniRef:UniRef100_B7NRC7,UniRef:UniRef50_P76329,UniRef:UniRef90_P76329;ec_number=3.1.3.70
contig_1	Pyrodigal	gene	1913620	1915314	.	-	.	ID=GCA000010485_01907_gene;locus_tag=GCA000010485_01907;gene=dgcQ
contig_1	Pyrodigal	CDS	1913620	1915314	.	-	0	ID=GCA000010485_01907;Name=cellulose biosynthesis regulator diguanylate cyclase DgcQ;locus_tag=GCA000010485_01907;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;Dbxref=GO:0005525,GO:0005886,GO:0030244,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcQ;Parent=GCA000010485_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2199,COG:T,RefSeq:WP_001545998.1,SO:0001217,UniParc:UPI0002A24682,UniRef:UniRef100_A0A7I0KQ92,UniRef:UniRef50_P76330,UniRef:UniRef90_P76330;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	1915485	1915667	.	-	.	ID=GCA000010485_01908_gene;locus_tag=GCA000010485_01908
contig_1	Pyrodigal	CDS	1915485	1915667	.	-	0	ID=GCA000010485_01908;Name=DUF2158 domain-containing protein;locus_tag=GCA000010485_01908;product=DUF2158 domain-containing protein;Parent=GCA000010485_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009302.1,SO:0001217,UniParc:UPI000000E31B,UniRef:UniRef100_A0A0G9FH19,UniRef:UniRef50_P64517,UniRef:UniRef90_A0A0G9FH19
contig_1	Pyrodigal	gene	1915746	1916663	.	-	.	ID=GCA000010485_01909_gene;locus_tag=GCA000010485_01909;gene=yedI
contig_1	Pyrodigal	CDS	1915746	1916663	.	-	0	ID=GCA000010485_01909;Name=Inner membrane protein YedI;locus_tag=GCA000010485_01909;product=Inner membrane protein YedI;Dbxref=GO:0005886;gene=yedI;Parent=GCA000010485_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2354,COG:L,KEGG:K09781,RefSeq:WP_000922683.1,SO:0001217,UniParc:UPI00005AA7CE,UniRef:UniRef100_W8T906,UniRef:UniRef50_P46125,UniRef:UniRef90_P46125
contig_1	Pyrodigal	gene	1916836	1917756	.	+	.	ID=GCA000010485_01910_gene;locus_tag=GCA000010485_01910;gene=yedA
contig_1	Pyrodigal	CDS	1916836	1917756	.	+	0	ID=GCA000010485_01910;Name=drug/metabolite exporter YedA;locus_tag=GCA000010485_01910;product=drug/metabolite exporter YedA;Dbxref=GO:0005886,GO:0009636,GO:0016020;gene=yedA;Parent=GCA000010485_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001212226.1,SO:0001217,UniParc:UPI000013ABF1,UniRef:UniRef100_P0AA70,UniRef:UniRef50_P0AA70,UniRef:UniRef90_P0AA70
contig_1	Pyrodigal	gene	1917745	1918215	.	-	.	ID=GCA000010485_01911_gene;locus_tag=GCA000010485_01911;gene=vsr
contig_1	Pyrodigal	CDS	1917745	1918215	.	-	0	ID=GCA000010485_01911;Name=VSPR family DNA mismatch endonuclease;locus_tag=GCA000010485_01911;product=VSPR family DNA mismatch endonuclease;gene=vsr;Parent=GCA000010485_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000786005,RefSeq:WP_000228686.1,SO:0001217,UniParc:UPI00005EFAD8,UniRef:UniRef100_A0A066T5U8,UniRef:UniRef50_P09184,UniRef:UniRef90_W8TZM7;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1918196	1919614	.	-	.	ID=GCA000010485_01912_gene;locus_tag=GCA000010485_01912;gene=dcm
contig_1	Pyrodigal	CDS	1918196	1919614	.	-	0	ID=GCA000010485_01912;Name=DNA-cytosine methyltransferase;locus_tag=GCA000010485_01912;product=DNA-cytosine methyltransferase;Dbxref=GO:0003677,GO:0003886,GO:0009307,GO:0032259,GO:0044027,GO:0051719,GO:0051720;gene=dcm;Parent=GCA000010485_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001157239,COG:COG0270,COG:LJ,KEGG:K00558,RefSeq:WP_001157268.1,SO:0001217,UniParc:UPI00000DECCB,UniRef:UniRef100_A0A0J2DML2,UniRef:UniRef50_P05101,UniRef:UniRef90_P0AED9;ec_number=2.1.1.37
contig_1	Pyrodigal	gene	1919681	1920376	.	-	.	ID=GCA000010485_01913_gene;locus_tag=GCA000010485_01913;gene=yedJ
contig_1	Pyrodigal	CDS	1919681	1920376	.	-	0	ID=GCA000010485_01913;Name=phosphohydrolase;locus_tag=GCA000010485_01913;product=phosphohydrolase;gene=yedJ;Parent=GCA000010485_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001527153.1,SO:0001217,UniParc:UPI0001C22EA7,UniRef:UniRef100_A0A3K0JXG9,UniRef:UniRef50_P46144,UniRef:UniRef90_P46144
contig_1	Infernal	gene	1920946	1921035	.	+	.	ID=GCA000010485_01914_gene;locus_tag=GCA000010485_01914;gene=rseX
contig_1	Infernal	ncRNA	1920946	1921035	1.4e-12	+	.	ID=GCA000010485_01914;Name=rseX Hfq binding RNA;locus_tag=GCA000010485_01914;gene=rseX;product=rseX Hfq binding RNA;Dbxref=RFAM:RF01401;Parent=GCA000010485_01914_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01401
contig_1	Pyrodigal	gene	1920979	1921089	.	-	.	ID=GCA000010485_01915_gene;locus_tag=GCA000010485_01915
contig_1	Pyrodigal	CDS	1920979	1921089	.	-	0	ID=GCA000010485_01915;Name=Phage protein;locus_tag=GCA000010485_01915;product=Phage protein;Parent=GCA000010485_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A27BB7,UniRef:UniRef100_A0AA36KY51,UniRef:UniRef50_S1PHN0,UniRef:UniRef90_A0AA36KY51
contig_1	Pyrodigal	gene	1921347	1922405	.	+	.	ID=GCA000010485_01916_gene;locus_tag=GCA000010485_01916
contig_1	Pyrodigal	CDS	1921347	1922405	.	+	0	ID=GCA000010485_01916;Name=Porin;locus_tag=GCA000010485_01916;product=Porin;Parent=GCA000010485_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824389.1,SO:0001217,UniParc:UPI0001C22EA8,UniRef:UniRef100_A0A210GEH4,UniRef:UniRef50_A0A346GK88,UniRef:UniRef90_A0A346GK88
contig_1	Pyrodigal	gene	1923000	1923851	.	+	.	ID=GCA000010485_01917_gene;locus_tag=GCA000010485_01917;gene=hchA
contig_1	Pyrodigal	CDS	1923000	1923851	.	+	0	ID=GCA000010485_01917;Name=glyoxalase III HchA;locus_tag=GCA000010485_01917;product=glyoxalase III HchA;Dbxref=GO:0005737,GO:0006281,GO:0008270,GO:0016790,GO:0019172,GO:0019243,GO:0030091,GO:0036524;gene=hchA;Parent=GCA000010485_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05523,RefSeq:WP_000218225.1,SO:0001217,UniParc:UPI0001C22EA9,UniRef:UniRef100_A0A7I0KQ66,UniRef:UniRef50_P31658,UniRef:UniRef90_P31658;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	1923959	1925317	.	-	.	ID=GCA000010485_01918_gene;locus_tag=GCA000010485_01918;gene=hprS
contig_1	Pyrodigal	CDS	1923959	1925317	.	-	0	ID=GCA000010485_01918;Name=two-component system sensor histidine kinase HprS;locus_tag=GCA000010485_01918;product=two-component system sensor histidine kinase HprS;Dbxref=GO:0000155,GO:0000160,GO:0004672,GO:0005524,GO:0005886,GO:0006974,GO:0016772,GO:0046688,GO:1901530;gene=hprS;Parent=GCA000010485_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000826792,RefSeq:WP_000826725.1,SO:0001217,UniParc:UPI0001C22EAA,UniRef:UniRef100_A0A7I0KQA1,UniRef:UniRef50_P76339,UniRef:UniRef90_P76339;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1925317	1926099	.	-	.	ID=GCA000010485_01919_gene;locus_tag=GCA000010485_01919;gene=hprR
contig_1	Pyrodigal	CDS	1925317	1926099	.	-	0	ID=GCA000010485_01919;Name=response regulator transcription factor HprR;locus_tag=GCA000010485_01919;product=response regulator transcription factor HprR;Dbxref=GO:0000156,GO:0000976,GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0032993,GO:0045892,GO:0045893;gene=hprR;Parent=GCA000010485_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,SO:0001217,UniRef:UniRef50_P76340,UniRef:UniRef90_P76340
contig_1	Pyrodigal	gene	1926121	1926534	.	+	.	ID=GCA000010485_01920_gene;locus_tag=GCA000010485_01920;gene=hiuH
contig_1	Pyrodigal	CDS	1926121	1926534	.	+	0	ID=GCA000010485_01920;Name=hydroxyisourate hydrolase;locus_tag=GCA000010485_01920;product=hydroxyisourate hydrolase;Dbxref=GO:0006144,GO:0032991,GO:0033971,GO:0042597,GO:0042802,GO:0051289;gene=hiuH;Parent=GCA000010485_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000920127.1,SO:0001217,UniParc:UPI000000E323,UniRef:UniRef100_E2QNG1,UniRef:UniRef50_P76341,UniRef:UniRef90_P76341;ec_number=3.5.2.17
contig_1	Pyrodigal	gene	1926643	1927647	.	+	.	ID=GCA000010485_01921_gene;locus_tag=GCA000010485_01921;gene=msrP
contig_1	Pyrodigal	CDS	1926643	1927647	.	+	0	ID=GCA000010485_01921;Name=protein-methionine-sulfoxide reductase catalytic subunit MsrP;locus_tag=GCA000010485_01921;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;Dbxref=GO:0016667,GO:0016672,GO:0030091,GO:0042597,GO:0043546,GO:0046872;gene=msrP;Parent=GCA000010485_01921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2041,RefSeq:WP_000740055.1,SO:0001217,UniParc:UPI0001C22EAC,UniRef:UniRef100_A0A7I0KYT1,UniRef:UniRef50_P76342,UniRef:UniRef90_P76342;ec_number=1.8.5.-
contig_1	Pyrodigal	gene	1927648	1928283	.	+	.	ID=GCA000010485_01922_gene;locus_tag=GCA000010485_01922;gene=msrQ
contig_1	Pyrodigal	CDS	1927648	1928283	.	+	0	ID=GCA000010485_01922;Name=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;locus_tag=GCA000010485_01922;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;Dbxref=GO:0005886,GO:0009055,GO:0010181,GO:0016679,GO:0020037,GO:0030091,GO:0046872;gene=msrQ;Parent=GCA000010485_01922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001241496,COG:C,COG:COG2717,RefSeq:WP_001240061.1,SO:0001217,UniParc:UPI000000E324,UniRef:UniRef100_Q83KM2,UniRef:UniRef50_P76343,UniRef:UniRef90_P76343
contig_1	Pyrodigal	gene	1928541	1929191	.	+	.	ID=GCA000010485_01923_gene;locus_tag=GCA000010485_01923;gene=zinT
contig_1	Pyrodigal	CDS	1928541	1929191	.	+	0	ID=GCA000010485_01923;Name=metal-binding protein ZinT;locus_tag=GCA000010485_01923;product=metal-binding protein ZinT;Dbxref=GO:0005829,GO:0006882,GO:0008270,GO:0030288,GO:0034224,GO:0046870,GO:0046872,GO:0070301,GO:0071276;gene=zinT;Parent=GCA000010485_01923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3443,COG:P,RefSeq:WP_001007774.1,SO:0001217,UniParc:UPI0001C22EAD,UniRef:UniRef100_A0A2W0GUA4,UniRef:UniRef50_P76344,UniRef:UniRef90_P76344
contig_1	tRNAscan-SE	gene	1929861	1929950	.	-	.	ID=GCA000010485_01924_gene;locus_tag=GCA000010485_01924;gene=trnS
contig_1	tRNAscan-SE	tRNA	1929861	1929950	.	-	.	ID=GCA000010485_01924;Name=tRNA-Ser(cga);locus_tag=GCA000010485_01924;product=tRNA-Ser(cga);gene=trnS;anti_codon=cga;amino_acid=Ser;Parent=GCA000010485_01924_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	1930044	1930841	.	+	.	ID=GCA000010485_01925_gene;locus_tag=GCA000010485_01925;gene=mtfA
contig_1	Pyrodigal	CDS	1930044	1930841	.	+	0	ID=GCA000010485_01925;Name=DgsA anti-repressor MtfA;locus_tag=GCA000010485_01925;product=DgsA anti-repressor MtfA;Dbxref=GO:0004177,GO:0005829,GO:0006508,GO:0008237,GO:0008270;gene=mtfA;Parent=GCA000010485_01925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3228,COG:T,KEGG:K09933,RefSeq:WP_001311896.1,SO:0001217,UniParc:UPI0001887F35,UniRef:UniRef100_B7NRA8,UniRef:UniRef50_P76346,UniRef:UniRef90_P76346
contig_1	tRNAscan-SE	gene	1930942	1931017	.	+	.	ID=GCA000010485_01926_gene;locus_tag=GCA000010485_01926;gene=trnN
contig_1	tRNAscan-SE	tRNA	1930942	1931017	.	+	.	ID=GCA000010485_01926;Name=tRNA-Asn(gtt);locus_tag=GCA000010485_01926;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000010485_01926_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1931479	1932441	.	+	.	ID=GCA000010485_01927_gene;locus_tag=GCA000010485_01927
contig_1	Pyrodigal	CDS	1931479	1932441	.	+	0	ID=GCA000010485_01927;Name=Integrase;locus_tag=GCA000010485_01927;product=Integrase;Parent=GCA000010485_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22EAE,UniRef:UniRef100_A0A376K8W5,UniRef:UniRef50_A0A376K8W5,UniRef:UniRef90_A0A377K4T3
contig_1	Pyrodigal	gene	1932635	1933939	.	-	.	ID=GCA000010485_01928_gene;locus_tag=GCA000010485_01928;gene=ybtS
contig_1	Pyrodigal	CDS	1932635	1933939	.	-	0	ID=GCA000010485_01928;Name=salicylate synthase Irp9;locus_tag=GCA000010485_01928;product=salicylate synthase Irp9;Dbxref=GO:0008909,GO:0016833;gene=ybtS;Parent=GCA000010485_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_000703043.1,SO:0001217,UniParc:UPI0000D5B7F1,UniRef:UniRef100_A0A7I0KQA5,UniRef:UniRef50_Q9X9I8,UniRef:UniRef90_Q9X9I8,VFDB:VFC0272,VFDB:VFG000368;ec_number=4.2.99.21
contig_1	Pyrodigal	gene	1933967	1935247	.	-	.	ID=GCA000010485_01929_gene;locus_tag=GCA000010485_01929;gene=ybtX
contig_1	Pyrodigal	CDS	1933967	1935247	.	-	0	ID=GCA000010485_01929;Name=putative signal transducer;locus_tag=GCA000010485_01929;product=putative signal transducer;gene=ybtX;Parent=GCA000010485_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05373,RefSeq:WP_001286295.1,SO:0001217,UniParc:UPI0001C22EAF,UniRef:UniRef100_A0A7I0KRK9,UniRef:UniRef50_A0A0B0VZW8,UniRef:UniRef90_A0A0B0VZW8,VFDB:VFC0272,VFDB:VFG000367
contig_1	Pyrodigal	gene	1935240	1937042	.	-	.	ID=GCA000010485_01930_gene;locus_tag=GCA000010485_01930;gene=ybtQ
contig_1	Pyrodigal	CDS	1935240	1937042	.	-	0	ID=GCA000010485_01930;Name=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;locus_tag=GCA000010485_01930;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;gene=ybtQ;Parent=GCA000010485_01930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002212761,COG:COG1132,COG:V,NCBIProtein:AAC69584.1,RefSeq:WP_000654456.1,SO:0001217,UniParc:UPI0001C22EB0,UniRef:UniRef100_A0A3K2YC94,UniRef:UniRef50_A0A2D0AQJ5,UniRef:UniRef90_A0A2D0AQJ5
contig_1	Pyrodigal	gene	1937029	1938741	.	-	.	ID=GCA000010485_01931_gene;locus_tag=GCA000010485_01931;gene=ybtP
contig_1	Pyrodigal	CDS	1937029	1938741	.	-	0	ID=GCA000010485_01931;Name=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;locus_tag=GCA000010485_01931;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;gene=ybtP;Parent=GCA000010485_01931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000098391,COG:COG1132,COG:V,NCBIProtein:CAA21388.1,RefSeq:WP_001573877.1,SO:0001217,UniParc:UPI0002A32267,UniRef:UniRef100_A0A7I0KQB0,UniRef:UniRef50_A0A3N6UUF6,UniRef:UniRef90_A0A2D0AQI1
contig_1	Pyrodigal	gene	1938998	1939957	.	+	.	ID=GCA000010485_01932_gene;locus_tag=GCA000010485_01932;gene=ybtA
contig_1	Pyrodigal	CDS	1938998	1939957	.	+	0	ID=GCA000010485_01932;Name=yersiniabactin transcriptional regulator YbtA;locus_tag=GCA000010485_01932;product=yersiniabactin transcriptional regulator YbtA;gene=ybtA;Parent=GCA000010485_01932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000140406,COG:COG2207,COG:K,KEGG:K05372,RefSeq:WP_000140400.1,SO:0001217,UniParc:UPI0001A515CA,UniRef:UniRef100_C4N4N3,UniRef:UniRef50_C4N4L3,UniRef:UniRef90_C4N4L3
contig_1	Pyrodigal	gene	1940148	1946255	.	+	.	ID=GCA000010485_01933_gene;locus_tag=GCA000010485_01933;gene=irp2
contig_1	Pyrodigal	CDS	1940148	1946255	.	+	0	ID=GCA000010485_01933;Name=yersiniabactin non-ribosomal peptide synthetase HMWP2;locus_tag=GCA000010485_01933;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;Dbxref=GO:0005737,GO:0009403,GO:0016874,GO:0031177,GO:0043041;gene=irp2;Parent=GCA000010485_01933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_011171836,COG:C,COG:COG4106,RefSeq:WP_000623040.1,SO:0001217,UniParc:UPI0001C22B38,UniRef:UniRef100_A0A3K0QJU0,UniRef:UniRef50_P48633,UniRef:UniRef90_P48633
contig_1	Pyrodigal	gene	1946343	1955834	.	+	.	ID=GCA000010485_01934_gene;locus_tag=GCA000010485_01934;gene=irp1
contig_1	Pyrodigal	CDS	1946343	1955834	.	+	0	ID=GCA000010485_01934;Name=yersiniabactin biosynthetic protein Irp1;locus_tag=GCA000010485_01934;product=yersiniabactin biosynthetic protein Irp1;gene=irp1;Parent=GCA000010485_01934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3321,COG:Q,RefSeq:WP_000369526.1,SO:0001217,UniParc:UPI0001C22B39,UniRef:UniRef100_A0A7I0L1B5,UniRef:UniRef50_A0A7U1FGE5,UniRef:UniRef90_A0A7U1FGE5,VFDB:VFC0272,VFDB:VFG000362
contig_1	Pyrodigal	gene	1955831	1956931	.	+	.	ID=GCA000010485_01935_gene;locus_tag=GCA000010485_01935;gene=ybtU
contig_1	Pyrodigal	CDS	1955831	1956931	.	+	0	ID=GCA000010485_01935;Name=yersiniabactin biosynthetic protein YbtU;locus_tag=GCA000010485_01935;product=yersiniabactin biosynthetic protein YbtU;gene=ybtU;Parent=GCA000010485_01935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4693,COG:P,RefSeq:WP_000982870.1,SO:0001217,UniParc:UPI0000D5B7F7,UniRef:UniRef100_Q1RPI6,UniRef:UniRef50_W9BA38,UniRef:UniRef90_W9BA38,VFDB:VFC0272,VFDB:VFG000361
contig_1	Pyrodigal	gene	1956928	1957731	.	+	.	ID=GCA000010485_01936_gene;locus_tag=GCA000010485_01936;gene=ybtT
contig_1	Pyrodigal	CDS	1956928	1957731	.	+	0	ID=GCA000010485_01936;Name=yersiniabactin biosynthesis thioesterase YbtT;locus_tag=GCA000010485_01936;product=yersiniabactin biosynthesis thioesterase YbtT;gene=ybtT;Parent=GCA000010485_01936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002212799,COG:COG3208,COG:Q,KEGG:K05374,RefSeq:WP_000194277.1,SO:0001217,UniParc:UPI0001E8CB0A,UniRef:UniRef100_A0A2X5P3Q6,UniRef:UniRef50_A0A061LQM0,UniRef:UniRef90_A0A061LQM0
contig_1	Pyrodigal	gene	1957735	1959312	.	+	.	ID=GCA000010485_01937_gene;locus_tag=GCA000010485_01937;gene=ybtE
contig_1	Pyrodigal	CDS	1957735	1959312	.	+	0	ID=GCA000010485_01937;Name=yersiniabactin biosynthesis salycil-AMP ligase YbtE;locus_tag=GCA000010485_01937;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;gene=ybtE;Parent=GCA000010485_01937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001088826,BlastRules:WP_011168856,COG:COG1021,COG:Q,RefSeq:WP_001088820.1,SO:0001217,UniParc:UPI0001C22B3B,UniRef:UniRef100_A0A2X5Q4T6,UniRef:UniRef50_A0A378AS41,UniRef:UniRef90_A0A378AS41;ec_number=2.7.7.-
contig_1	Pyrodigal	gene	1959444	1961465	.	+	.	ID=GCA000010485_01938_gene;locus_tag=GCA000010485_01938;gene=fyuA
contig_1	Pyrodigal	CDS	1959444	1961465	.	+	0	ID=GCA000010485_01938;Name=yersiniabactin receptor FyuA;locus_tag=GCA000010485_01938;product=yersiniabactin receptor FyuA;Dbxref=GO:0009279,GO:0015344,GO:0038023,GO:0044718;gene=fyuA;Parent=GCA000010485_01938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4771,COG:P,KEGG:K15721,RefSeq:WP_000784549.1,SO:0001217,UniParc:UPI00000B1382,UniRef:UniRef100_Q798T6,UniRef:UniRef50_P46359,UniRef:UniRef90_P46359,VFDB:VFC0272,VFDB:VFG044333
contig_1	Pyrodigal	gene	1962116	1962865	.	+	.	ID=GCA000010485_01939_gene;locus_tag=GCA000010485_01939
contig_1	Pyrodigal	CDS	1962116	1962865	.	+	0	ID=GCA000010485_01939;Name=Inverse autotransporter beta-domain domain-containing protein;locus_tag=GCA000010485_01939;product=Inverse autotransporter beta-domain domain-containing protein;Parent=GCA000010485_01939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000039788.1,SO:0001217,UniParc:UPI0001DBD02B,UniRef:UniRef100_Q1RPI2,UniRef:UniRef50_A0A7Z1J2T8,UniRef:UniRef90_A0A7Z1J2T8
contig_1	Pyrodigal	gene	1962998	1964467	.	+	.	ID=GCA000010485_01940_gene;locus_tag=GCA000010485_01940
contig_1	Pyrodigal	CDS	1962998	1964467	.	+	0	ID=GCA000010485_01940;Name=Adhesin/invasin;locus_tag=GCA000010485_01940;product=Adhesin/invasin;Parent=GCA000010485_01940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000191E5C1,UniRef:UniRef100_A0A7I0L194,UniRef:UniRef50_A0A1V2GC91,UniRef:UniRef90_S1PZU6
contig_1	Pyrodigal	gene	1964480	1964956	.	+	.	ID=GCA000010485_01941_gene;locus_tag=GCA000010485_01941
contig_1	Pyrodigal	CDS	1964480	1964956	.	+	0	ID=GCA000010485_01941;Name=Invasin;locus_tag=GCA000010485_01941;product=Invasin;Parent=GCA000010485_01941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000DECFE,UniRef:UniRef100_A0A061YH84,UniRef:UniRef50_A0A9P2MP23,UniRef:UniRef90_A0A061YH84
contig_1	Pyrodigal	gene	1965084	1966136	.	-	.	ID=GCA000010485_01942_gene;locus_tag=GCA000010485_01942
contig_1	Pyrodigal	CDS	1965084	1966136	.	-	0	ID=GCA000010485_01942;Name=Lipopolysaccharide heptosyltransferase family protein;locus_tag=GCA000010485_01942;product=Lipopolysaccharide heptosyltransferase family protein;Parent=GCA000010485_01942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000480517.1,SO:0001217,UniParc:UPI0001C22B3C,UniRef:UniRef100_A0A061YFF1,UniRef:UniRef50_A0A0F6TVP1,UniRef:UniRef90_A0A0H3EK99
contig_1	Pyrodigal	gene	1966451	1967767	.	+	.	ID=GCA000010485_01943_gene;locus_tag=GCA000010485_01943;gene=shiA
contig_1	Pyrodigal	CDS	1966451	1967767	.	+	0	ID=GCA000010485_01943;Name=shikimate transporter;locus_tag=GCA000010485_01943;product=shikimate transporter;Dbxref=GO:0005886,GO:0015293,GO:0015530,GO:0015733,GO:0016020,GO:0022857,GO:0055085;gene=shiA;Parent=GCA000010485_01943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2211,COG:G,RefSeq:WP_000378562.1,SO:0001217,UniParc:UPI00000DED01,UniRef:UniRef100_Q1RPH9,UniRef:UniRef50_P76350,UniRef:UniRef90_P76350
contig_1	Pyrodigal	gene	1967869	1969323	.	+	.	ID=GCA000010485_01944_gene;locus_tag=GCA000010485_01944;gene=amn
contig_1	Pyrodigal	CDS	1967869	1969323	.	+	0	ID=GCA000010485_01944;Name=AMP nucleosidase;locus_tag=GCA000010485_01944;product=AMP nucleosidase;Dbxref=GO:0005829,GO:0008714,GO:0009116,GO:0044209;gene=amn;Parent=GCA000010485_01944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01241,RefSeq:WP_001060231.1,SO:0001217,UniParc:UPI0000D5B7FE,UniRef:UniRef100_Q1RPH8,UniRef:UniRef50_P0AE12,UniRef:UniRef90_P0AE12;ec_number=3.2.2.4
contig_1	Pyrodigal	gene	1969666	1970382	.	+	.	ID=GCA000010485_01945_gene;locus_tag=GCA000010485_01945;gene=yeeN
contig_1	Pyrodigal	CDS	1969666	1970382	.	+	0	ID=GCA000010485_01945;Name=putative transcriptional regulatory protein YeeN;locus_tag=GCA000010485_01945;product=putative transcriptional regulatory protein YeeN;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=yeeN;Parent=GCA000010485_01945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_000532917.1,SO:0001217,UniParc:UPI0001C22B3D,UniRef:UniRef100_A0A2W0H4S7,UniRef:UniRef50_P0A8A2,UniRef:UniRef90_P0A8A2
contig_1	tRNAscan-SE	gene	1970836	1970911	.	-	.	ID=GCA000010485_01946_gene;locus_tag=GCA000010485_01946;gene=trnN
contig_1	tRNAscan-SE	tRNA	1970836	1970911	.	-	.	ID=GCA000010485_01946;Name=tRNA-Asn(gtt);locus_tag=GCA000010485_01946;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000010485_01946_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1971012	1971602	.	-	.	ID=GCA000010485_01947_gene;locus_tag=GCA000010485_01947
contig_1	Pyrodigal	CDS	1971012	1971602	.	-	0	ID=GCA000010485_01947;Name=MATE family efflux transporter;locus_tag=GCA000010485_01947;product=MATE family efflux transporter;Parent=GCA000010485_01947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1B7HTS3,UniRef:UniRef90_UPI002929A484
contig_1	Pyrodigal	gene	1972382	1973299	.	+	.	ID=GCA000010485_01948_gene;locus_tag=GCA000010485_01948;gene=nac
contig_1	Pyrodigal	CDS	1972382	1973299	.	+	0	ID=GCA000010485_01948;Name=nitrogen assimilation transcriptional regulator NAC;locus_tag=GCA000010485_01948;product=nitrogen assimilation transcriptional regulator NAC;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0042128,GO:0045892,GO:0045893,GO:2000142;gene=nac;Parent=GCA000010485_01948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001011491.1,SO:0001217,UniParc:UPI0001C22B40,UniRef:UniRef100_A0A061YCE6,UniRef:UniRef50_Q47005,UniRef:UniRef90_Q47005
contig_1	Pyrodigal	gene	1973401	1974351	.	+	.	ID=GCA000010485_01949_gene;locus_tag=GCA000010485_01949;gene=cbl
contig_1	Pyrodigal	CDS	1973401	1974351	.	+	0	ID=GCA000010485_01949;Name=HTH-type transcriptional regulator Cbl;locus_tag=GCA000010485_01949;product=HTH-type transcriptional regulator Cbl;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0019344,GO:0045883;gene=cbl;Parent=GCA000010485_01949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K13635,RefSeq:WP_001011025.1,SO:0001217,UniParc:UPI0001C22B41,UniRef:UniRef100_A0A7I0L9R8,UniRef:UniRef50_Q47083,UniRef:UniRef90_Q47083
contig_1	tRNAscan-SE	gene	1974389	1974464	.	-	.	ID=GCA000010485_01950_gene;locus_tag=GCA000010485_01950;gene=trnN
contig_1	tRNAscan-SE	tRNA	1974389	1974464	.	-	.	ID=GCA000010485_01950;Name=tRNA-Asn(gtt);locus_tag=GCA000010485_01950;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000010485_01950_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1974658	1976112	.	+	.	ID=GCA000010485_01951_gene;locus_tag=GCA000010485_01951;gene=yeeO
contig_1	Pyrodigal	CDS	1974658	1976112	.	+	0	ID=GCA000010485_01951;Name=toxic metabolite efflux MATE transporter YeeO;locus_tag=GCA000010485_01951;product=toxic metabolite efflux MATE transporter YeeO;Dbxref=GO:0005886,GO:0015031,GO:0015230,GO:0015297,GO:0016020,GO:0035350,GO:0035442,GO:0042910,GO:0044610,GO:0055085,GO:0071916;gene=yeeO;Parent=GCA000010485_01951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001323172,RefSeq:WP_001385389.1,SO:0001217,UniParc:UPI00020DFA11,UniRef:UniRef100_UPI00020DFA11,UniRef:UniRef50_P76352,UniRef:UniRef90_P76352
contig_1	tRNAscan-SE	gene	1976213	1976288	.	+	.	ID=GCA000010485_01952_gene;locus_tag=GCA000010485_01952;gene=trnN
contig_1	tRNAscan-SE	tRNA	1976213	1976288	.	+	.	ID=GCA000010485_01952;Name=tRNA-Asn(gtt);locus_tag=GCA000010485_01952;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000010485_01952_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1976344	1977279	.	-	.	ID=GCA000010485_01953_gene;locus_tag=GCA000010485_01953;gene=ldtA
contig_1	Pyrodigal	CDS	1976344	1977279	.	-	0	ID=GCA000010485_01953;Name=L%2CD-transpeptidase;locus_tag=GCA000010485_01953;product=L%2CD-transpeptidase;Dbxref=GO:0008360,GO:0016740,GO:0016757,GO:0018104,GO:0042597,GO:0071555,GO:0071972;gene=ldtA;Parent=GCA000010485_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1376,COG:M,RefSeq:WP_000986344.1,SO:0001217,UniParc:UPI00000E4A20,UniRef:UniRef100_A0A2X3A6B4,UniRef:UniRef50_P39176,UniRef:UniRef90_P39176;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	1977341	1978420	.	-	.	ID=GCA000010485_01954_gene;locus_tag=GCA000010485_01954;gene=cobT
contig_1	Pyrodigal	CDS	1977341	1978420	.	-	0	ID=GCA000010485_01954;Name=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;locus_tag=GCA000010485_01954;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;Dbxref=GO:0008939,GO:0009236;gene=cobT;Parent=GCA000010485_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2038,COG:H,KEGG:K00768,RefSeq:WP_001166163.1,SO:0001217,UniParc:UPI00000DED17,UniRef:UniRef100_Q8FGA5,UniRef:UniRef50_Q05603,UniRef:UniRef90_P36562;ec_number=2.4.2.21
contig_1	Pyrodigal	gene	1978432	1979175	.	-	.	ID=GCA000010485_01955_gene;locus_tag=GCA000010485_01955;gene=cobS
contig_1	Pyrodigal	CDS	1978432	1979175	.	-	0	ID=GCA000010485_01955;Name=adenosylcobinamide-GDP ribazoletransferase;locus_tag=GCA000010485_01955;product=adenosylcobinamide-GDP ribazoletransferase;Dbxref=GO:0005886,GO:0008818,GO:0009236,GO:0051073;gene=cobS;Parent=GCA000010485_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0368,COG:H,KEGG:K02233,RefSeq:WP_001296197.1,SO:0001217,UniParc:UPI00001D8A97,UniRef:UniRef100_Q8FGA4,UniRef:UniRef50_P36561,UniRef:UniRef90_P36561;ec_number=2.7.8.26
contig_1	Pyrodigal	gene	1979172	1979714	.	-	.	ID=GCA000010485_01956_gene;locus_tag=GCA000010485_01956;gene=cobU
contig_1	Pyrodigal	CDS	1979172	1979714	.	-	0	ID=GCA000010485_01956;Name=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;locus_tag=GCA000010485_01956;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;Dbxref=GO:0000166,GO:0005524,GO:0005525,GO:0006779,GO:0006974,GO:0008820,GO:0009236,GO:0043752;gene=cobU;Parent=GCA000010485_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2087,COG:H,SO:0001217,UniParc:UPI000245EC29,UniRef:UniRef100_W8T0B5,UniRef:UniRef50_Q05599,UniRef:UniRef90_P0AE76;ec_number=2.7.7.62
contig_1	Bakta	gene	1980739	1980828	.	-	.	ID=GCA000010485_01957_gene;locus_tag=GCA000010485_01957;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1980739	1980828	.	-	0	ID=GCA000010485_01957;Name=Transposase;locus_tag=GCA000010485_01957;product=Transposase;Parent=GCA000010485_01957_gene;Note=SO:0001217,UniParc:UPI0001887EEC,UniRef:UniRef100_A0A0H3MG11,UniRef:UniRef50_B7MT39,UniRef:UniRef90_A0A0H3MG11
contig_1	Pyrodigal	gene	1981389	1983536	.	+	.	ID=GCA000010485_01958_gene;locus_tag=GCA000010485_01958
contig_1	Pyrodigal	CDS	1981389	1983536	.	+	0	ID=GCA000010485_01958;Name=TonB-dependent receptor;locus_tag=GCA000010485_01958;product=TonB-dependent receptor;Parent=GCA000010485_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000966628.1,SO:0001217,UniParc:UPI00000DED1C,UniRef:UniRef100_A0A061LJ90,UniRef:UniRef50_A0A2X4UQT8,UniRef:UniRef90_Q93TP3
contig_1	Pyrodigal	gene	1983524	1983652	.	+	.	ID=GCA000010485_01959_gene;locus_tag=GCA000010485_01959
contig_1	Pyrodigal	CDS	1983524	1983652	.	+	0	ID=GCA000010485_01959;Name=hypothetical protein;locus_tag=GCA000010485_01959;product=hypothetical protein;Parent=GCA000010485_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000DED1D,UniRef:UniRef100_A0A1Y5C538,UniRef:UniRef50_A0A0H3PFZ4,UniRef:UniRef90_A0A0H3PFZ4
contig_1	Pyrodigal	gene	1983907	1984551	.	-	.	ID=GCA000010485_01960_gene;locus_tag=GCA000010485_01960;gene=parB
contig_1	Pyrodigal	CDS	1983907	1984551	.	-	0	ID=GCA000010485_01960;Name=ParB N-terminal domain-containing protein;locus_tag=GCA000010485_01960;product=ParB N-terminal domain-containing protein;gene=parB;Parent=GCA000010485_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000502868.1,SO:0001217,UniParc:UPI0001C22E36,UniRef:UniRef100_A0A7I0L172,UniRef:UniRef50_P77174,UniRef:UniRef90_Q8GA36
contig_1	Pyrodigal	gene	1984536	1985759	.	-	.	ID=GCA000010485_01961_gene;locus_tag=GCA000010485_01961
contig_1	Pyrodigal	CDS	1984536	1985759	.	-	0	ID=GCA000010485_01961;Name=Phosphoadenosine phosphosulfate reductase;locus_tag=GCA000010485_01961;product=Phosphoadenosine phosphosulfate reductase;Parent=GCA000010485_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001362826.1,SO:0001217,UniParc:UPI00000439E4,UniRef:UniRef100_A0A0G9FJL2,UniRef:UniRef50_P77216,UniRef:UniRef90_A0A7D3TNK7
contig_1	Pyrodigal	gene	1986808	1987461	.	+	.	ID=GCA000010485_01962_gene;locus_tag=GCA000010485_01962
contig_1	Pyrodigal	CDS	1986808	1987461	.	+	0	ID=GCA000010485_01962;Name=PIG-L family deacetylase;locus_tag=GCA000010485_01962;product=PIG-L family deacetylase;Parent=GCA000010485_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001297930.1,SO:0001217,UniParc:UPI0000DACEC4,UniRef:UniRef100_A0A1X9V8R5,UniRef:UniRef50_P71311,UniRef:UniRef90_A0A0H3MFA0
contig_1	Pyrodigal	gene	1987475	1988671	.	+	.	ID=GCA000010485_01963_gene;locus_tag=GCA000010485_01963;gene=yaiP
contig_1	Pyrodigal	CDS	1987475	1988671	.	+	0	ID=GCA000010485_01963;Name=putative glycosyltransferase YaiP;locus_tag=GCA000010485_01963;product=putative glycosyltransferase YaiP;Dbxref=GO:0006974,GO:0016757,GO:0016874;gene=yaiP;Parent=GCA000010485_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000854360.1,SO:0001217,UniParc:UPI0000D50A18,UniRef:UniRef100_A0A066T040,UniRef:UniRef50_Q47536,UniRef:UniRef90_Q47536;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1988706	1989230	.	+	.	ID=GCA000010485_01964_gene;locus_tag=GCA000010485_01964
contig_1	Pyrodigal	CDS	1988706	1989230	.	+	0	ID=GCA000010485_01964;Name=Acetyltransferase;locus_tag=GCA000010485_01964;product=Acetyltransferase;Parent=GCA000010485_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000582569.1,SO:0001217,UniParc:UPI00000DED1F,UniRef:UniRef100_A0A193RM36,UniRef:UniRef50_P75697,UniRef:UniRef90_A0A193RM36
contig_1	Pyrodigal	gene	1989232	1990005	.	+	.	ID=GCA000010485_01965_gene;locus_tag=GCA000010485_01965;gene=yaiO
contig_1	Pyrodigal	CDS	1989232	1990005	.	+	0	ID=GCA000010485_01965;Name=YaiO family beta-barrel domain-containing protein;locus_tag=GCA000010485_01965;product=YaiO family beta-barrel domain-containing protein;gene=yaiO;Parent=GCA000010485_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000589886.1,SO:0001217,UniParc:UPI0001C22E37,UniRef:UniRef100_A0A7I0L164,UniRef:UniRef50_P0AAP3,UniRef:UniRef90_A0AAJ3NZI8
contig_1	Pyrodigal	gene	1990695	1990811	.	+	.	ID=GCA000010485_01966_gene;locus_tag=GCA000010485_01966
contig_1	Pyrodigal	CDS	1990695	1990811	.	+	0	ID=GCA000010485_01966;Name=Transposase;locus_tag=GCA000010485_01966;product=Transposase;Parent=GCA000010485_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000464852.1,SO:0001217,UniParc:UPI0000DACEC8,UniRef:UniRef100_A0A024L287,UniRef:UniRef50_A0A024L287,UniRef:UniRef90_A0A024L287
contig_1	Pyrodigal	gene	1991007	1992221	.	+	.	ID=GCA000010485_01967_gene;locus_tag=GCA000010485_01967
contig_1	Pyrodigal	CDS	1991007	1992221	.	+	0	ID=GCA000010485_01967;Name=Ribokinase;locus_tag=GCA000010485_01967;product=Ribokinase;Parent=GCA000010485_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00852,RefSeq:WP_000667429.1,SO:0001217,UniParc:UPI00000DED21,UniRef:UniRef100_A0A067HQX2,UniRef:UniRef50_A0A067HQX2,UniRef:UniRef90_A0A067HQX2;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	1992235	1992993	.	+	.	ID=GCA000010485_01968_gene;locus_tag=GCA000010485_01968
contig_1	Pyrodigal	CDS	1992235	1992993	.	+	0	ID=GCA000010485_01968;Name=Putative glutamine amidotransferase domain-containing protein;locus_tag=GCA000010485_01968;product=Putative glutamine amidotransferase domain-containing protein;Parent=GCA000010485_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001066363.1,SO:0001217,UniParc:UPI0001C22E38,UniRef:UniRef100_A0A7I0L173,UniRef:UniRef50_V6M4D6,UniRef:UniRef90_A0A370V0L1
contig_1	Pyrodigal	gene	1993047	1994012	.	+	.	ID=GCA000010485_01969_gene;locus_tag=GCA000010485_01969
contig_1	Pyrodigal	CDS	1993047	1994012	.	+	0	ID=GCA000010485_01969;Name=DMT family transporter;locus_tag=GCA000010485_01969;product=DMT family transporter;Parent=GCA000010485_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09936,RefSeq:WP_000739821.1,SO:0001217,UniParc:UPI0001C22E39,UniRef:UniRef100_A0A7I0L161,UniRef:UniRef50_A0A628HWA2,UniRef:UniRef90_A0A628HWA2
contig_1	Pyrodigal	gene	1994015	1995049	.	+	.	ID=GCA000010485_01970_gene;locus_tag=GCA000010485_01970
contig_1	Pyrodigal	CDS	1994015	1995049	.	+	0	ID=GCA000010485_01970;Name=Phosphotriesterase;locus_tag=GCA000010485_01970;product=Phosphotriesterase;Parent=GCA000010485_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000656349.1,SO:0001217,UniParc:UPI00000DED24,UniRef:UniRef100_A0A061YCF5,UniRef:UniRef50_S2W1C4,UniRef:UniRef90_A0A7U9IYU8
contig_1	Pyrodigal	gene	1995701	1995964	.	-	.	ID=GCA000010485_01971_gene;locus_tag=GCA000010485_01971
contig_1	Pyrodigal	CDS	1995701	1995964	.	-	0	ID=GCA000010485_01971;Name=ISL3 family transposase;locus_tag=GCA000010485_01971;product=ISL3 family transposase;Dbxref=GO:0004803;Parent=GCA000010485_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07485,SO:0001217,UniParc:UPI00033B6C65,UniRef:UniRef100_A0A4C4LV03,UniRef:UniRef50_A0A379QIA0,UniRef:UniRef90_A0A4C4LV03
contig_1	Pyrodigal	gene	1997364	1997774	.	-	.	ID=GCA000010485_01972_gene;locus_tag=GCA000010485_01972
contig_1	Pyrodigal	CDS	1997364	1997774	.	-	0	ID=GCA000010485_01972;Name=DNA-directed RNA polymerase%2C beta subunit/140 kD subunit;locus_tag=GCA000010485_01972;product=DNA-directed RNA polymerase%2C beta subunit/140 kD subunit;Parent=GCA000010485_01972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001221617.1,SO:0001217,UniParc:UPI00000DED27,UniRef:UniRef100_A0AAI8H536,UniRef:UniRef50_Q5K5T4,UniRef:UniRef90_A0AA43V1C1
contig_1	Pyrodigal	gene	1997762	1998163	.	-	.	ID=GCA000010485_01973_gene;locus_tag=GCA000010485_01973
contig_1	Pyrodigal	CDS	1997762	1998163	.	-	0	ID=GCA000010485_01973;Name=Ybl85;locus_tag=GCA000010485_01973;product=Ybl85;Parent=GCA000010485_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000271042.1,SO:0001217,UniParc:UPI00000DED28,UniRef:UniRef100_A0A061LA23,UniRef:UniRef50_Q5K5T3,UniRef:UniRef90_A0A3P5DK22
contig_1	Pyrodigal	gene	1998329	1998898	.	-	.	ID=GCA000010485_01974_gene;locus_tag=GCA000010485_01974
contig_1	Pyrodigal	CDS	1998329	1998898	.	-	0	ID=GCA000010485_01974;Name=Inovirus Gp2 family protein;locus_tag=GCA000010485_01974;product=Inovirus Gp2 family protein;Parent=GCA000010485_01974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000221518.1,SO:0001217,UniParc:UPI0001C22E3B,UniRef:UniRef100_A0A7I0L8H1,UniRef:UniRef50_D2TSU1,UniRef:UniRef90_A0A4C9GE12
contig_1	Pyrodigal	gene	1999098	1999298	.	+	.	ID=GCA000010485_01975_gene;locus_tag=GCA000010485_01975
contig_1	Pyrodigal	CDS	1999098	1999298	.	+	0	ID=GCA000010485_01975;Name=Zinc ribbon domain-containing protein;locus_tag=GCA000010485_01975;product=Zinc ribbon domain-containing protein;Parent=GCA000010485_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001297900.1,SO:0001217,UniParc:UPI000176BDE4,UniRef:UniRef100_A0A024L0K2,UniRef:UniRef50_A0A024L0K2,UniRef:UniRef90_A0A024L0K2
contig_1	Pyrodigal	gene	2000126	2000551	.	+	.	ID=GCA000010485_01976_gene;locus_tag=GCA000010485_01976;gene=tnpA
contig_1	Pyrodigal	CDS	2000126	2000551	.	+	0	ID=GCA000010485_01976;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_01976;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_1	Pyrodigal	gene	2000548	2000898	.	+	.	ID=GCA000010485_01977_gene;locus_tag=GCA000010485_01977;gene=tnpB
contig_1	Pyrodigal	CDS	2000548	2000898	.	+	0	ID=GCA000010485_01977;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_01977;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_01977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_1	Pyrodigal	gene	2000929	2002542	.	+	.	ID=GCA000010485_01978_gene;locus_tag=GCA000010485_01978;gene=tnp
contig_1	Pyrodigal	CDS	2000929	2002542	.	+	0	ID=GCA000010485_01978;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_01978;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_1	Pyrodigal	gene	2003018	2004214	.	+	.	ID=GCA000010485_01979_gene;locus_tag=GCA000010485_01979;gene=tnp
contig_1	Pyrodigal	CDS	2003018	2004214	.	+	0	ID=GCA000010485_01979;Name=IS110 family ISEc20 transposase;locus_tag=GCA000010485_01979;product=IS110 family ISEc20 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_01979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3547,COG:X,IS:ISEc20,RefSeq:WP_001311911.1,SO:0001217,UniParc:UPI0001C22E3C,UniRef:UniRef100_A0A7I0L1C6,UniRef:UniRef50_A4JAM4,UniRef:UniRef90_Q8GA45
contig_1	Pyrodigal	gene	2004410	2004616	.	+	.	ID=GCA000010485_01980_gene;locus_tag=GCA000010485_01980
contig_1	Pyrodigal	CDS	2004410	2004616	.	+	0	ID=GCA000010485_01980;Name=Transcriptional regulator;locus_tag=GCA000010485_01980;product=Transcriptional regulator;Parent=GCA000010485_01980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000235219.1,SO:0001217,UniParc:UPI0000DACECF,UniRef:UniRef100_A0A1X9V916,UniRef:UniRef50_A0A2A2XJW8,UniRef:UniRef90_A0A0E1LFS6
contig_1	Pyrodigal	gene	2004710	2005312	.	+	.	ID=GCA000010485_01981_gene;locus_tag=GCA000010485_01981
contig_1	Pyrodigal	CDS	2004710	2005312	.	+	0	ID=GCA000010485_01981;Name=Aec62;locus_tag=GCA000010485_01981;product=Aec62;Parent=GCA000010485_01981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000813432.1,SO:0001217,UniParc:UPI000170F155,UniRef:UniRef100_A0A1X0PCE0,UniRef:UniRef50_A0A376LJ58,UniRef:UniRef90_A0A0H2Z066
contig_1	Pyrodigal	gene	2006338	2006982	.	-	.	ID=GCA000010485_01982_gene;locus_tag=GCA000010485_01982;gene=istB
contig_1	Pyrodigal	CDS	2006338	2006982	.	-	0	ID=GCA000010485_01982;Name=IS21-like element helper ATPase IstB;locus_tag=GCA000010485_01982;product=IS21-like element helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_01982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22E3D,UniRef:UniRef100_A0A7I0L9P4,UniRef:UniRef50_A0A085A802,UniRef:UniRef90_A0A7I0L9P4
contig_1	Pyrodigal	gene	2006972	2007118	.	-	.	ID=GCA000010485_01983_gene;locus_tag=GCA000010485_01983
contig_1	Pyrodigal	CDS	2006972	2007118	.	-	0	ID=GCA000010485_01983;Name=ATP-binding protein;locus_tag=GCA000010485_01983;product=ATP-binding protein;Parent=GCA000010485_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0010DA0F63,UniRef:UniRef90_UPI0010DA0F63
contig_1	Pyrodigal	gene	2007118	2008140	.	-	.	ID=GCA000010485_01984_gene;locus_tag=GCA000010485_01984;gene=tnp
contig_1	Pyrodigal	CDS	2007118	2008140	.	-	0	ID=GCA000010485_01984;Name=IS21 family IS100 transposase;locus_tag=GCA000010485_01984;product=IS21 family IS100 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4584,COG:X,IS:IS100,RefSeq:WP_001373875.1,SO:0001217,UniParc:UPI0001C22E3E,UniRef:UniRef100_A0AAV1IN64,UniRef:UniRef50_Q93K87,UniRef:UniRef90_Q93K87
contig_1	Bakta	gene	2008154	2008237	.	-	.	ID=GCA000010485_01985_gene;locus_tag=GCA000010485_01985;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2008154	2008237	.	-	0	ID=GCA000010485_01985;Name=Glutathione S-transferase;locus_tag=GCA000010485_01985;product=Glutathione S-transferase;Parent=GCA000010485_01985_gene;Note=SO:0001217,UniRef:UniRef50_A0A2J7KGL3,UniRef:UniRef90_A0A2J7KGL3
contig_1	Bakta	gene	2008476	2008538	.	+	.	ID=GCA000010485_01986_gene;locus_tag=GCA000010485_01986;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2008476	2008538	.	+	0	ID=GCA000010485_01986;Name=Insertion sequence IS21 putative ATP-binding protein;locus_tag=GCA000010485_01986;product=Insertion sequence IS21 putative ATP-binding protein;Parent=GCA000010485_01986_gene;Note=SO:0001217,UniRef:UniRef50_B7MDE5,UniRef:UniRef90_B7MDE5
contig_1	Pyrodigal	gene	2009665	2010810	.	+	.	ID=GCA000010485_01987_gene;locus_tag=GCA000010485_01987
contig_1	Pyrodigal	CDS	2009665	2010810	.	+	0	ID=GCA000010485_01987;Name=Phage protein;locus_tag=GCA000010485_01987;product=Phage protein;Parent=GCA000010485_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000176BDDC,UniRef:UniRef100_S1Q018,UniRef:UniRef50_S1Q018,UniRef:UniRef90_S1Q018
contig_1	Pyrodigal	gene	2011341	2011598	.	-	.	ID=GCA000010485_01988_gene;locus_tag=GCA000010485_01988
contig_1	Pyrodigal	CDS	2011341	2011598	.	-	0	ID=GCA000010485_01988;Name=hypothetical protein;locus_tag=GCA000010485_01988;product=hypothetical protein;Parent=GCA000010485_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001163787.1,SO:0001217,UniParc:UPI00000B18C6,UniRef:UniRef100_Q8VR77,UniRef:UniRef50_Q8VR77,UniRef:UniRef90_Q8VR77
contig_1	Pyrodigal	gene	2011652	2012419	.	-	.	ID=GCA000010485_01989_gene;locus_tag=GCA000010485_01989
contig_1	Pyrodigal	CDS	2011652	2012419	.	-	0	ID=GCA000010485_01989;Name=ABC transporter;locus_tag=GCA000010485_01989;product=ABC transporter;Parent=GCA000010485_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000016205.1,SO:0001217,UniParc:UPI0000043AC7,UniRef:UniRef100_Q8VR78,UniRef:UniRef50_A0A447S227,UniRef:UniRef90_Q8VR78
contig_1	Pyrodigal	gene	2012416	2013474	.	-	.	ID=GCA000010485_01990_gene;locus_tag=GCA000010485_01990;gene=fepD
contig_1	Pyrodigal	CDS	2012416	2013474	.	-	0	ID=GCA000010485_01990;Name=ABC-type Fe3+-siderophore transport system%2C permease component;locus_tag=GCA000010485_01990;product=ABC-type Fe3+-siderophore transport system%2C permease component;gene=fepD;Parent=GCA000010485_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000217077.1,SO:0001217,UniParc:UPI0000043AC8,UniRef:UniRef100_Q8VR79,UniRef:UniRef50_A0A0F6TZF5,UniRef:UniRef90_L0M579
contig_1	Pyrodigal	gene	2013493	2014482	.	-	.	ID=GCA000010485_01991_gene;locus_tag=GCA000010485_01991;gene=fepB
contig_1	Pyrodigal	CDS	2013493	2014482	.	-	0	ID=GCA000010485_01991;Name=Periplasmic binding protein;locus_tag=GCA000010485_01991;product=Periplasmic binding protein;gene=fepB;Parent=GCA000010485_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000778019.1,SO:0001217,UniParc:UPI0002A399C4,UniRef:UniRef100_A0A7I0LA36,UniRef:UniRef50_A8AJ43,UniRef:UniRef90_K8AJ53
contig_1	Pyrodigal	gene	2014493	2016658	.	-	.	ID=GCA000010485_01992_gene;locus_tag=GCA000010485_01992;gene=fhuE
contig_1	Pyrodigal	CDS	2014493	2016658	.	-	0	ID=GCA000010485_01992;Name=TonB-dependent siderophore receptor;locus_tag=GCA000010485_01992;product=TonB-dependent siderophore receptor;gene=fhuE;Parent=GCA000010485_01992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4773,COG:P,RefSeq:WP_000856947.1,SO:0001217,UniParc:UPI0000043ACA,UniRef:UniRef100_A0A0G3JMZ3,UniRef:UniRef50_A0A071LUQ2,UniRef:UniRef90_L0M8I0
contig_1	Pyrodigal	gene	2017087	2017521	.	+	.	ID=GCA000010485_01993_gene;locus_tag=GCA000010485_01993
contig_1	Pyrodigal	CDS	2017087	2017521	.	+	0	ID=GCA000010485_01993;Name=GTPase;locus_tag=GCA000010485_01993;product=GTPase;Parent=GCA000010485_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001069647.1,SO:0001217,UniParc:UPI0000D50A1E,UniRef:UniRef100_A0A7I0L8F5,UniRef:UniRef50_F5NWB6,UniRef:UniRef90_F5NWB6
contig_1	Pyrodigal	gene	2017739	2020123	.	+	.	ID=GCA000010485_01994_gene;locus_tag=GCA000010485_01994
contig_1	Pyrodigal	CDS	2017739	2020123	.	+	0	ID=GCA000010485_01994;Name=Dynamin-type G domain-containing protein;locus_tag=GCA000010485_01994;product=Dynamin-type G domain-containing protein;Parent=GCA000010485_01994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000544739.1,SO:0001217,UniParc:UPI0001C22E41,UniRef:UniRef100_A0A7I0L9N6,UniRef:UniRef50_A0A0H3MNS7,UniRef:UniRef90_A0A0H2V8R9
contig_1	Pyrodigal	gene	2020120	2021025	.	+	.	ID=GCA000010485_01995_gene;locus_tag=GCA000010485_01995
contig_1	Pyrodigal	CDS	2020120	2021025	.	+	0	ID=GCA000010485_01995;Name=Methyl-accepting chemotaxis protein;locus_tag=GCA000010485_01995;product=Methyl-accepting chemotaxis protein;Parent=GCA000010485_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000203550.1,SO:0001217,UniParc:UPI00000DED37,UniRef:UniRef100_A0A0G3JSZ5,UniRef:UniRef50_C6CLI8,UniRef:UniRef90_B7MDE9
contig_1	Pyrodigal	gene	2021022	2022092	.	+	.	ID=GCA000010485_01996_gene;locus_tag=GCA000010485_01996
contig_1	Pyrodigal	CDS	2021022	2022092	.	+	0	ID=GCA000010485_01996;Name=Phospholipase;locus_tag=GCA000010485_01996;product=Phospholipase;Parent=GCA000010485_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000102631.1,SO:0001217,UniParc:UPI0000043ACD,UniRef:UniRef100_A0A0G9FVH5,UniRef:UniRef50_A0A0H3MEX6,UniRef:UniRef90_A0A0G9FVH5
contig_1	Pyrodigal	gene	2022228	2022905	.	+	.	ID=GCA000010485_01997_gene;locus_tag=GCA000010485_01997
contig_1	Pyrodigal	CDS	2022228	2022905	.	+	0	ID=GCA000010485_01997;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000010485_01997;product=DNA polymerase III subunit gamma/tau;Parent=GCA000010485_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001362823.1,SO:0001217,UniParc:UPI0000043B6B,UniRef:UniRef100_A0A0G3JQM1,UniRef:UniRef50_A0A0E2L4C9,UniRef:UniRef90_A0A0E2L4C9
contig_1	Pyrodigal	gene	2022921	2023331	.	+	.	ID=GCA000010485_01998_gene;locus_tag=GCA000010485_01998
contig_1	Pyrodigal	CDS	2022921	2023331	.	+	0	ID=GCA000010485_01998;Name=Phage protein;locus_tag=GCA000010485_01998;product=Phage protein;Parent=GCA000010485_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846704.1,SO:0001217,UniParc:UPI0000043B6C,UniRef:UniRef100_A0A0G9FW12,UniRef:UniRef50_A0A3P5E0E5,UniRef:UniRef90_A0A7U9P127
contig_1	Pyrodigal	gene	2023552	2024373	.	+	.	ID=GCA000010485_01999_gene;locus_tag=GCA000010485_01999
contig_1	Pyrodigal	CDS	2023552	2024373	.	+	0	ID=GCA000010485_01999;Name=DUF945 domain-containing protein;locus_tag=GCA000010485_01999;product=DUF945 domain-containing protein;Parent=GCA000010485_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001234710.1,SO:0001217,UniParc:UPI00000DE9E0,UniRef:UniRef100_Q6KD74,UniRef:UniRef50_Q8GA18,UniRef:UniRef90_Q1RA73
contig_1	Pyrodigal	gene	2024399	2024545	.	-	.	ID=GCA000010485_02000_gene;locus_tag=GCA000010485_02000
contig_1	Pyrodigal	CDS	2024399	2024545	.	-	0	ID=GCA000010485_02000;Name=hypothetical protein;locus_tag=GCA000010485_02000;product=hypothetical protein;Parent=GCA000010485_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F495C,UniRef:UniRef100_A0A1L1K166,UniRef:UniRef50_A0A1L1K166,UniRef:UniRef90_A0A1L1K166
contig_1	Pyrodigal	gene	2024636	2025109	.	+	.	ID=GCA000010485_02001_gene;locus_tag=GCA000010485_02001
contig_1	Pyrodigal	CDS	2024636	2025109	.	+	0	ID=GCA000010485_02001;Name=Antirestriction protein;locus_tag=GCA000010485_02001;product=Antirestriction protein;Parent=GCA000010485_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001385393.1,SO:0001217,UniParc:UPI0001C22E42,UniRef:UniRef100_F4T164,UniRef:UniRef50_Q5K5L7,UniRef:UniRef90_Q5K5L7
contig_1	Pyrodigal	gene	2025125	2025601	.	+	.	ID=GCA000010485_02002_gene;locus_tag=GCA000010485_02002;gene=yeeS
contig_1	Pyrodigal	CDS	2025125	2025601	.	+	0	ID=GCA000010485_02002;Name=UPF0758 protein YeeS;locus_tag=GCA000010485_02002;product=UPF0758 protein YeeS;Dbxref=GO:0006508,GO:0008237,GO:0046872;gene=yeeS;Parent=GCA000010485_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_001186773.1,SO:0001217,UniParc:UPI000174CE58,UniRef:UniRef100_P76362,UniRef:UniRef50_P52140,UniRef:UniRef90_P76362
contig_1	Pyrodigal	gene	2025664	2025885	.	+	.	ID=GCA000010485_02003_gene;locus_tag=GCA000010485_02003;gene=yeeT
contig_1	Pyrodigal	CDS	2025664	2025885	.	+	0	ID=GCA000010485_02003;Name=putative protein YeeT;locus_tag=GCA000010485_02003;product=putative protein YeeT;gene=yeeT;Parent=GCA000010485_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_000692323.1,SO:0001217,UniParc:UPI0000001B61,UniRef:UniRef100_P64521,UniRef:UniRef50_P64521,UniRef:UniRef90_P64521
contig_1	Pyrodigal	gene	2025965	2026333	.	+	.	ID=GCA000010485_02004_gene;locus_tag=GCA000010485_02004;gene=cbtA
contig_1	Pyrodigal	CDS	2025965	2026333	.	+	0	ID=GCA000010485_02004;Name=type IV toxin-antitoxin system toxin CbtA;locus_tag=GCA000010485_02004;product=type IV toxin-antitoxin system toxin CbtA;gene=cbtA;Parent=GCA000010485_02004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000854814,BlastRules:WP_001285584,KEGG:K18838,RefSeq:WP_001285587.1,SO:0001217,UniParc:UPI00000D08C8,UniRef:UniRef100_A0A9Q6Z808,UniRef:UniRef50_A0A376W550,UniRef:UniRef90_A0A376W550
contig_1	Pyrodigal	gene	2026422	2026796	.	+	.	ID=GCA000010485_02005_gene;locus_tag=GCA000010485_02005;gene=cbtA
contig_1	Pyrodigal	CDS	2026422	2026796	.	+	0	ID=GCA000010485_02005;Name=type IV toxin-antitoxin system toxin CbtA;locus_tag=GCA000010485_02005;product=type IV toxin-antitoxin system toxin CbtA;Dbxref=GO:0001896,GO:0005737,GO:0008092,GO:0008360,GO:0051494,GO:2000245;gene=cbtA;Parent=GCA000010485_02005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000854814,BlastRules:WP_001285584,RefSeq:WP_000854814.1,SO:0001217,UniParc:UPI000013AC1E,UniRef:UniRef100_P64524,UniRef:UniRef50_P64524,UniRef:UniRef90_P64524
contig_1	Pyrodigal	gene	2026793	2026987	.	+	.	ID=GCA000010485_02006_gene;locus_tag=GCA000010485_02006;gene=yeeW
contig_1	Pyrodigal	CDS	2026793	2026987	.	+	0	ID=GCA000010485_02006;Name=Protein YeeW;locus_tag=GCA000010485_02006;product=Protein YeeW;gene=yeeW;Parent=GCA000010485_02006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000988601.1,SO:0001217,UniParc:UPI00000DED3E,UniRef:UniRef100_A0A0G9FVX4,UniRef:UniRef50_P64526,UniRef:UniRef90_P64526
contig_1	Pyrodigal	gene	2027476	2028222	.	-	.	ID=GCA000010485_02007_gene;locus_tag=GCA000010485_02007;gene=istB
contig_1	Pyrodigal	CDS	2027476	2028222	.	-	0	ID=GCA000010485_02007;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_02007;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_1	Pyrodigal	gene	2028237	2029778	.	-	.	ID=GCA000010485_02008_gene;locus_tag=GCA000010485_02008;gene=tnp
contig_1	Pyrodigal	CDS	2028237	2029778	.	-	0	ID=GCA000010485_02008;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_02008;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_1	Pyrodigal	gene	2030505	2030834	.	-	.	ID=GCA000010485_02009_gene;locus_tag=GCA000010485_02009;gene=yeeX
contig_1	Pyrodigal	CDS	2030505	2030834	.	-	0	ID=GCA000010485_02009;Name=DUF496 domain-containing protein;locus_tag=GCA000010485_02009;product=DUF496 domain-containing protein;Dbxref=GO:0005829;gene=yeeX;Parent=GCA000010485_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2926,COG:S,KEGG:K09802,RefSeq:WP_000450409.1,SO:0001217,UniParc:UPI000013AC20,UniRef:UniRef100_P0A8M6,UniRef:UniRef50_P0A8M6,UniRef:UniRef90_P0A8M6
contig_1	Bakta	gene	2030900	2030950	.	-	.	ID=GCA000010485_02010_gene;locus_tag=GCA000010485_02010;inference=ab initio prediction:Bakta;gene=yoeJ
contig_1	Bakta	CDS	2030900	2030950	.	-	0	ID=GCA000010485_02010;Name=Protein YoeJ;locus_tag=GCA000010485_02010;product=Protein YoeJ;gene=yoeJ;Parent=GCA000010485_02010_gene;Note=RefSeq:WP_240811044.1,SO:0001217,UniParc:UPI001E25D359,UniRef:UniRef100_P0DUW3,UniRef:UniRef50_P0DUW3,UniRef:UniRef90_P0DUW3
contig_1	Pyrodigal	gene	2031006	2032064	.	-	.	ID=GCA000010485_02011_gene;locus_tag=GCA000010485_02011;gene=yeeA
contig_1	Pyrodigal	CDS	2031006	2032064	.	-	0	ID=GCA000010485_02011;Name=Inner membrane protein YeeA;locus_tag=GCA000010485_02011;product=Inner membrane protein YeeA;Dbxref=GO:0005886,GO:0022857;gene=yeeA;Parent=GCA000010485_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_001200894.1,SO:0001217,UniParc:UPI0001C22E73,UniRef:UniRef100_A0A2W0H3N3,UniRef:UniRef50_P33011,UniRef:UniRef90_P33011
contig_1	Pyrodigal	gene	2032262	2032735	.	-	.	ID=GCA000010485_02012_gene;locus_tag=GCA000010485_02012;gene=sbmC
contig_1	Pyrodigal	CDS	2032262	2032735	.	-	0	ID=GCA000010485_02012;Name=DNA gyrase inhibitor SbmC;locus_tag=GCA000010485_02012;product=DNA gyrase inhibitor SbmC;Dbxref=GO:0005737,GO:0008657;gene=sbmC;Parent=GCA000010485_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001105376.1,SO:0001217,UniParc:UPI00000DED41,UniRef:UniRef100_Q1RPC1,UniRef:UniRef50_P33012,UniRef:UniRef90_P33012
contig_1	Pyrodigal	gene	2032854	2034020	.	-	.	ID=GCA000010485_02013_gene;locus_tag=GCA000010485_02013;gene=dacD
contig_1	Pyrodigal	CDS	2032854	2034020	.	-	0	ID=GCA000010485_02013;Name=serine-type D-Ala-D-Ala carboxypeptidase DacD;locus_tag=GCA000010485_02013;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;Dbxref=GO:0000270,GO:0004180,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008800,GO:0009002,GO:0009252,GO:0071555;gene=dacD;Parent=GCA000010485_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,KEGG:K07258,RefSeq:WP_001296209.1,SO:0001217,UniParc:UPI00016A133F,UniRef:UniRef100_E2QNN7,UniRef:UniRef50_P33013,UniRef:UniRef90_P33013;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	2034229	2035656	.	+	.	ID=GCA000010485_02014_gene;locus_tag=GCA000010485_02014;gene=sbcB
contig_1	Pyrodigal	CDS	2034229	2035656	.	+	0	ID=GCA000010485_02014;Name=exodeoxyribonuclease I;locus_tag=GCA000010485_02014;product=exodeoxyribonuclease I;Dbxref=GO:0000175,GO:0000287,GO:0003676,GO:0003697,GO:0006274,GO:0006281,GO:0006308,GO:0008310,GO:0051575;gene=sbcB;Parent=GCA000010485_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2925,COG:L,KEGG:K01141,RefSeq:WP_000980569.1,SO:0001217,UniParc:UPI000191E75C,UniRef:UniRef100_A0AAP8W2J4,UniRef:UniRef50_P04995,UniRef:UniRef90_P04995;ec_number=3.1.11.1
contig_1	Pyrodigal	gene	2035730	2037088	.	-	.	ID=GCA000010485_02015_gene;locus_tag=GCA000010485_02015;gene=plaP
contig_1	Pyrodigal	CDS	2035730	2037088	.	-	0	ID=GCA000010485_02015;Name=putrescine/proton symporter PlaP;locus_tag=GCA000010485_02015;product=putrescine/proton symporter PlaP;Dbxref=GO:0005886,GO:0006865,GO:0015295,GO:0015489,GO:0015847,GO:0048870;gene=plaP;Parent=GCA000010485_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000019197,COG:COG0531,COG:E,KEGG:K14052,RefSeq:WP_000019194.1,SO:0001217,UniParc:UPI000176BE0E,UniRef:UniRef100_E2QNN9,UniRef:UniRef50_P76037,UniRef:UniRef90_P0AA47
contig_1	Bakta	gene	2037078	2037140	.	-	.	ID=GCA000010485_02016_gene;locus_tag=GCA000010485_02016;inference=ab initio prediction:Bakta;gene=yoeI
contig_1	Bakta	CDS	2037078	2037140	.	-	0	ID=GCA000010485_02016;Name=putative protein YoeI;locus_tag=GCA000010485_02016;product=putative protein YoeI;gene=yoeI;Parent=GCA000010485_02016_gene;Note=RefSeq:WP_010723108.1,SO:0001217,UniParc:UPI000199A548,UniRef:UniRef100_C1P606,UniRef:UniRef50_C1P606,UniRef:UniRef90_C1P606
contig_1	Infernal	gene	2037235	2037309	.	-	.	ID=GCA000010485_02017_gene;locus_tag=GCA000010485_02017;gene=STnc240
contig_1	Infernal	ncRNA	2037235	2037309	1.9e-09	-	.	ID=GCA000010485_02017;Name=Enterobacterial sRNA STnc240;locus_tag=GCA000010485_02017;product=Enterobacterial sRNA STnc240;Dbxref=RFAM:RF02074;Parent=GCA000010485_02017_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02074
contig_1	Pyrodigal	gene	2037355	2038305	.	-	.	ID=GCA000010485_02018_gene;locus_tag=GCA000010485_02018;gene=yeeY
contig_1	Pyrodigal	CDS	2037355	2038305	.	-	0	ID=GCA000010485_02018;Name=putative HTH-type transcriptional regulator YeeY;locus_tag=GCA000010485_02018;product=putative HTH-type transcriptional regulator YeeY;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=yeeY;Parent=GCA000010485_02018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000DED45,UniRef:UniRef100_A0A128AJT5,UniRef:UniRef50_P76369,UniRef:UniRef90_P76369
contig_1	Pyrodigal	gene	2038330	2039154	.	-	.	ID=GCA000010485_02019_gene;locus_tag=GCA000010485_02019;gene=yeeZ
contig_1	Pyrodigal	CDS	2038330	2039154	.	-	0	ID=GCA000010485_02019;Name=Protein YeeZ;locus_tag=GCA000010485_02019;product=Protein YeeZ;Dbxref=GO:0004029,GO:0005524,GO:0005737,GO:0005829;gene=yeeZ;Parent=GCA000010485_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000754737.1,SO:0001217,UniParc:UPI000013AC23,UniRef:UniRef100_P0AD12,UniRef:UniRef50_P0AD12,UniRef:UniRef90_P0AD12
contig_1	Pyrodigal	gene	2039237	2039491	.	-	.	ID=GCA000010485_02020_gene;locus_tag=GCA000010485_02020;gene=yoeB
contig_1	Pyrodigal	CDS	2039237	2039491	.	-	0	ID=GCA000010485_02020;Name=type II toxin-antitoxin system mRNA interferase toxin YoeB;locus_tag=GCA000010485_02020;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;Dbxref=GO:0003723,GO:0004519,GO:0006401,GO:0008219,GO:0098795;gene=yoeB;Parent=GCA000010485_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000767829,RefSeq:WP_000767822.1,SO:0001217,UniParc:UPI00000DED46,UniRef:UniRef100_Q8FG53,UniRef:UniRef50_P69348,UniRef:UniRef90_Q8FG53;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2039488	2039739	.	-	.	ID=GCA000010485_02021_gene;locus_tag=GCA000010485_02021;gene=yefM
contig_1	Pyrodigal	CDS	2039488	2039739	.	-	0	ID=GCA000010485_02021;Name=YoeB-YefM toxin-antitoxin system antitoxin YefM;locus_tag=GCA000010485_02021;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;Dbxref=GO:0003677;gene=yefM;Parent=GCA000010485_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19159,RefSeq:WP_001259255.1,SO:0001217,UniParc:UPI000013AC2A,UniRef:UniRef100_P69346,UniRef:UniRef50_P69346,UniRef:UniRef90_P69346
contig_1	Bakta	gene	2040022	2040072	.	+	.	ID=GCA000010485_02022_gene;locus_tag=GCA000010485_02022;inference=ab initio prediction:Bakta;gene=hisL
contig_1	Bakta	CDS	2040022	2040072	.	+	0	ID=GCA000010485_02022;Name=his operon leader peptide;locus_tag=GCA000010485_02022;product=his operon leader peptide;Dbxref=GO:0000105;gene=hisL;Parent=GCA000010485_02022_gene;Note=RefSeq:WP_001364200.1,SO:0001217,UniParc:UPI000012E854,UniRef:UniRef100_P60995,UniRef:UniRef50_P60995,UniRef:UniRef90_P60995
contig_1	Infernal	regulatory_region	2040048	2040171	3.9e-21	+	.	ID=EFPPCJGBKI_290;Name=Histidine operon leader;product=Histidine operon leader;Dbxref=RFAM:RF00514;inference=profile:Rfam:RF00514;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2040218	2041117	.	+	.	ID=GCA000010485_02023_gene;locus_tag=GCA000010485_02023;gene=hisG
contig_1	Pyrodigal	CDS	2040218	2041117	.	+	0	ID=GCA000010485_02023;Name=ATP phosphoribosyltransferase;locus_tag=GCA000010485_02023;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0000287,GO:0003879,GO:0005524,GO:0005737;gene=hisG;Parent=GCA000010485_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0040,COG:E,KEGG:K00765,RefSeq:WP_000131782.1,SO:0001217,UniParc:UPI000012C742,UniRef:UniRef100_P60757,UniRef:UniRef50_P60757,UniRef:UniRef90_P60757;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	2041123	2042427	.	+	.	ID=GCA000010485_02024_gene;locus_tag=GCA000010485_02024;gene=hisD
contig_1	Pyrodigal	CDS	2041123	2042427	.	+	0	ID=GCA000010485_02024;Name=Histidinol dehydrogenase;locus_tag=GCA000010485_02024;product=Histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005829,GO:0008270,GO:0051287;gene=hisD;Parent=GCA000010485_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0141,COG:E,KEGG:K00013,RefSeq:WP_001546022.1,SO:0001217,UniParc:UPI0001C22E75,UniRef:UniRef100_A0A7I0L2W4,UniRef:UniRef50_P10370,UniRef:UniRef90_P10370;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	2042424	2043494	.	+	.	ID=GCA000010485_02025_gene;locus_tag=GCA000010485_02025;gene=hisC
contig_1	Pyrodigal	CDS	2042424	2043494	.	+	0	ID=GCA000010485_02025;Name=histidinol-phosphate transaminase;locus_tag=GCA000010485_02025;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000010485_02025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_000108941.1,SO:0001217,UniParc:UPI00001118C8,UniRef:UniRef100_P06986,UniRef:UniRef50_P06986,UniRef:UniRef90_P06986;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	2043494	2044561	.	+	.	ID=GCA000010485_02026_gene;locus_tag=GCA000010485_02026;gene=hisB
contig_1	Pyrodigal	CDS	2043494	2044561	.	+	0	ID=GCA000010485_02026;Name=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000010485_02026;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004401,GO:0004424,GO:0005737,GO:0046872;gene=hisB;Parent=GCA000010485_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0241,COG:E,KEGG:K01089,RefSeq:WP_000080105.1,SO:0001217,UniParc:UPI000012C855,UniRef:UniRef100_P06987,UniRef:UniRef50_Q9S5G5,UniRef:UniRef90_Q9S5G5;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	2044561	2045151	.	+	.	ID=GCA000010485_02027_gene;locus_tag=GCA000010485_02027;gene=hisH
contig_1	Pyrodigal	CDS	2044561	2045151	.	+	0	ID=GCA000010485_02027;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000010485_02027;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0016829;gene=hisH;Parent=GCA000010485_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0118,COG:E,RefSeq:WP_001103560.1,SO:0001217,UniParc:UPI000012C7F9,UniRef:UniRef100_P60595,UniRef:UniRef50_P60595,UniRef:UniRef90_P60595;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2045151	2045888	.	+	.	ID=GCA000010485_02028_gene;locus_tag=GCA000010485_02028;gene=hisA
contig_1	Pyrodigal	CDS	2045151	2045888	.	+	0	ID=GCA000010485_02028;Name=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;locus_tag=GCA000010485_02028;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0005737;gene=hisA;Parent=GCA000010485_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,RefSeq:WP_000586440.1,SO:0001217,UniParc:UPI000018F921,UniRef:UniRef100_Q83R04,UniRef:UniRef50_P10371,UniRef:UniRef90_P10371;ec_number=5.3.1.16
contig_1	Pyrodigal	gene	2045870	2046646	.	+	.	ID=GCA000010485_02029_gene;locus_tag=GCA000010485_02029;gene=hisF
contig_1	Pyrodigal	CDS	2045870	2046646	.	+	0	ID=GCA000010485_02029;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000010485_02029;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000010485_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0107,COG:E,RefSeq:WP_000880178.1,SO:0001217,UniParc:UPI0001C22E76,UniRef:UniRef100_A0A2I1SFP7,UniRef:UniRef50_P60664,UniRef:UniRef90_P60664;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2046640	2047251	.	+	.	ID=GCA000010485_02030_gene;locus_tag=GCA000010485_02030;gene=hisIE
contig_1	Pyrodigal	CDS	2046640	2047251	.	+	0	ID=GCA000010485_02030;Name=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;locus_tag=GCA000010485_02030;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;Dbxref=GO:0000105,GO:0004635,GO:0004636,GO:0005524,GO:0005737;gene=hisIE;Parent=GCA000010485_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0140,COG:E,RefSeq:WP_000954926.1,SO:0001217,UniParc:UPI0001C22E77,UniRef:UniRef100_A0A7I0L8D0,UniRef:UniRef50_P37793,UniRef:UniRef90_P37793;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	2047437	2048414	.	-	.	ID=GCA000010485_02031_gene;locus_tag=GCA000010485_02031;gene=wzzB
contig_1	Pyrodigal	CDS	2047437	2048414	.	-	0	ID=GCA000010485_02031;Name=LPS O-antigen chain length determinant protein WzzB;locus_tag=GCA000010485_02031;product=LPS O-antigen chain length determinant protein WzzB;Dbxref=GO:0004713,GO:0005886,GO:0009103;gene=wzzB;Parent=GCA000010485_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001536169.1,SO:0001217,UniParc:UPI0000138FB0,UniRef:UniRef100_P35272,UniRef:UniRef50_P76372,UniRef:UniRef90_P35272
contig_1	Pyrodigal	gene	2048560	2049726	.	-	.	ID=GCA000010485_02032_gene;locus_tag=GCA000010485_02032;gene=ugd
contig_1	Pyrodigal	CDS	2048560	2049726	.	-	0	ID=GCA000010485_02032;Name=UDP-glucose 6-dehydrogenase;locus_tag=GCA000010485_02032;product=UDP-glucose 6-dehydrogenase;Dbxref=GO:0000271,GO:0003979,GO:0006065,GO:0009103,GO:0051287;gene=ugd;Parent=GCA000010485_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1004,COG:M,RefSeq:WP_000704857.1,SO:0001217,UniParc:UPI0000137AA5,UniRef:UniRef100_P76373,UniRef:UniRef50_P76373,UniRef:UniRef90_P76373;ec_number=1.1.1.22
contig_1	Pyrodigal	gene	2049975	2051381	.	-	.	ID=GCA000010485_02033_gene;locus_tag=GCA000010485_02033;gene=gndA
contig_1	Pyrodigal	CDS	2049975	2051381	.	-	0	ID=GCA000010485_02033;Name=NADP-dependent phosphogluconate dehydrogenase;locus_tag=GCA000010485_02033;product=NADP-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0005737,GO:0006098,GO:0016054,GO:0019521,GO:0050661;gene=gndA;Parent=GCA000010485_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00033,RefSeq:WP_000043484.1,SO:0001217,UniParc:UPI0000124F6D,UniRef:UniRef100_P00350,UniRef:UniRef50_P00350,UniRef:UniRef90_P00350,VFDB:VFC0258,VFDB:VFG048830;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	2051509	2052303	.	-	.	ID=GCA000010485_02034_gene;locus_tag=GCA000010485_02034;gene=wbbL
contig_1	Pyrodigal	CDS	2051509	2052303	.	-	0	ID=GCA000010485_02034;Name=Rhamnosyltransferase WbbL;locus_tag=GCA000010485_02034;product=Rhamnosyltransferase WbbL;Dbxref=GO:0009103,GO:0016758,GO:0045226;gene=wbbL;Parent=GCA000010485_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000262539.1,SO:0001217,UniParc:UPI0000138EB8,UniRef:UniRef100_P36667,UniRef:UniRef50_P36667,UniRef:UniRef90_P36667;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2052305	2053423	.	-	.	ID=GCA000010485_02035_gene;locus_tag=GCA000010485_02035;gene=wbbK
contig_1	Pyrodigal	CDS	2052305	2053423	.	-	0	ID=GCA000010485_02035;Name=Putative glycosyltransferase WbbK;locus_tag=GCA000010485_02035;product=Putative glycosyltransferase WbbK;Dbxref=GO:0005886,GO:0009103,GO:0016757,GO:0045226;gene=wbbK;Parent=GCA000010485_02035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000520320.1,SO:0001217,UniParc:UPI000003EB10,UniRef:UniRef100_P37751,UniRef:UniRef50_P37751,UniRef:UniRef90_P37751
contig_1	Pyrodigal	gene	2053408	2053998	.	-	.	ID=GCA000010485_02036_gene;locus_tag=GCA000010485_02036;gene=wbbJ
contig_1	Pyrodigal	CDS	2053408	2053998	.	-	0	ID=GCA000010485_02036;Name=Putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ;locus_tag=GCA000010485_02036;product=Putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ;Dbxref=GO:0005829,GO:0008374,GO:0009103;gene=wbbJ;Parent=GCA000010485_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08280,RefSeq:WP_000601187.1,SO:0001217,UniParc:UPI000003EB11,UniRef:UniRef100_P37750,UniRef:UniRef50_P37750,UniRef:UniRef90_P37750;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2053979	2054971	.	-	.	ID=GCA000010485_02037_gene;locus_tag=GCA000010485_02037;gene=wbbI
contig_1	Pyrodigal	CDS	2053979	2054971	.	-	0	ID=GCA000010485_02037;Name=beta-1%2C6-galactofuranosyltransferase;locus_tag=GCA000010485_02037;product=beta-1%2C6-galactofuranosyltransferase;Dbxref=GO:0005737,GO:0008921,GO:0009103;gene=wbbI;Parent=GCA000010485_02037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001407542.1,SO:0001217,UniParc:UPI000003EB12,UniRef:UniRef100_P37749,UniRef:UniRef50_P37749,UniRef:UniRef90_P37749;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2054974	2056140	.	-	.	ID=GCA000010485_02038_gene;locus_tag=GCA000010485_02038;gene=wzy
contig_1	Pyrodigal	CDS	2054974	2056140	.	-	0	ID=GCA000010485_02038;Name=O16 family O-antigen polymerase;locus_tag=GCA000010485_02038;product=O16 family O-antigen polymerase;Dbxref=GO:0005886,GO:0009103;gene=wzy;Parent=GCA000010485_02038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000639866,RefSeq:WP_000639866.1,SO:0001217,UniParc:UPI000003EB13,UniRef:UniRef100_P37748,UniRef:UniRef50_P37748,UniRef:UniRef90_P37748
contig_1	Pyrodigal	gene	2056140	2057243	.	-	.	ID=GCA000010485_02039_gene;locus_tag=GCA000010485_02039;gene=glf
contig_1	Pyrodigal	CDS	2056140	2057243	.	-	0	ID=GCA000010485_02039;Name=UDP-galactopyranose mutase;locus_tag=GCA000010485_02039;product=UDP-galactopyranose mutase;Dbxref=GO:0005829,GO:0008767,GO:0009103,GO:0009273,GO:0042803,GO:0050660;gene=glf;Parent=GCA000010485_02039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01854,RefSeq:WP_000272486.1,SO:0001217,UniParc:UPI000003EB14,UniRef:UniRef100_P37747,UniRef:UniRef50_P37747,UniRef:UniRef90_P37747;ec_number=5.4.99.9
contig_1	Pyrodigal	gene	2057251	2058498	.	-	.	ID=GCA000010485_02040_gene;locus_tag=GCA000010485_02040;gene=wzx
contig_1	Pyrodigal	CDS	2057251	2058498	.	-	0	ID=GCA000010485_02040;Name=O16 family O-antigen flippase;locus_tag=GCA000010485_02040;product=O16 family O-antigen flippase;Dbxref=GO:0005886,GO:0006974,GO:0009243,GO:0046677;gene=wzx;Parent=GCA000010485_02040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001393538,RefSeq:WP_001393538.1,SO:0001217,UniParc:UPI00001337EF,UniRef:UniRef100_P37746,UniRef:UniRef50_P37746,UniRef:UniRef90_P37746
contig_1	Pyrodigal	gene	2058495	2059052	.	-	.	ID=GCA000010485_02041_gene;locus_tag=GCA000010485_02041;gene=rfbC
contig_1	Pyrodigal	CDS	2058495	2059052	.	-	0	ID=GCA000010485_02041;Name=dTDP-4-dehydrorhamnose 3%2C5-epimerase;locus_tag=GCA000010485_02041;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;Dbxref=GO:0005829,GO:0006974,GO:0008830,GO:0009103,GO:0009243,GO:0009411,GO:0019305,GO:0045226,GO:0046677;gene=rfbC;Parent=GCA000010485_02041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001100981.1,SO:0001217,UniParc:UPI0000039F12,UniRef:UniRef100_P37745,UniRef:UniRef50_P37745,UniRef:UniRef90_P37745;ec_number=5.1.3.13
contig_1	Pyrodigal	gene	2059052	2059933	.	-	.	ID=GCA000010485_02042_gene;locus_tag=GCA000010485_02042;gene=rfbA
contig_1	Pyrodigal	CDS	2059052	2059933	.	-	0	ID=GCA000010485_02042;Name=glucose-1-phosphate thymidylyltransferase RfbA;locus_tag=GCA000010485_02042;product=glucose-1-phosphate thymidylyltransferase RfbA;Dbxref=GO:0000271,GO:0000287,GO:0008879,GO:0009243,GO:0019305,GO:0045226;gene=rfbA;Parent=GCA000010485_02042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1209,COG:M,RefSeq:WP_000783975.1,SO:0001217,UniParc:UPI00001131AE,UniRef:UniRef100_P37744,UniRef:UniRef50_P37744,UniRef:UniRef90_P37744;ec_number=2.7.7.24
contig_1	Pyrodigal	gene	2059991	2060890	.	-	.	ID=GCA000010485_02043_gene;locus_tag=GCA000010485_02043;gene=rfbD
contig_1	Pyrodigal	CDS	2059991	2060890	.	-	0	ID=GCA000010485_02043;Name=dTDP-4-dehydrorhamnose reductase;locus_tag=GCA000010485_02043;product=dTDP-4-dehydrorhamnose reductase;Dbxref=GO:0005829,GO:0008831,GO:0009103,GO:0009243,GO:0019305,GO:0045226,GO:0046872;gene=rfbD;Parent=GCA000010485_02043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1091,COG:M,KEGG:K00067,RefSeq:WP_001023617.1,SO:0001217,UniParc:UPI0001C22E79,UniRef:UniRef100_A0A7I0L9L0,UniRef:UniRef50_P26392,UniRef:UniRef90_Q46769;ec_number=1.1.1.133
contig_1	Pyrodigal	gene	2060890	2061975	.	-	.	ID=GCA000010485_02044_gene;locus_tag=GCA000010485_02044;gene=rfbB
contig_1	Pyrodigal	CDS	2060890	2061975	.	-	0	ID=GCA000010485_02044;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000010485_02044;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009103,GO:0009225,GO:0009243,GO:0019305,GO:0045226;gene=rfbB;Parent=GCA000010485_02044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1088,COG:M,RefSeq:WP_000699450.1,SO:0001217,UniParc:UPI00018880BB,UniRef:UniRef100_A0A140N8V0,UniRef:UniRef50_P26391,UniRef:UniRef90_P37759;ec_number=4.2.1.46
contig_1	Infernal	regulatory_region	2062050	2062088	7.9e-13	-	.	ID=EFPPCJGBKI_314;Name=JUMPstart RNA;product=JUMPstart RNA;Dbxref=RFAM:RF01707;inference=profile:Rfam:RF01707;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2062348	2063241	.	-	.	ID=GCA000010485_02045_gene;locus_tag=GCA000010485_02045;gene=galF
contig_1	Pyrodigal	CDS	2062348	2063241	.	-	0	ID=GCA000010485_02045;Name=UTP--glucose-1-phosphate uridylyltransferase GalF;locus_tag=GCA000010485_02045;product=UTP--glucose-1-phosphate uridylyltransferase GalF;Dbxref=GO:0003983,GO:0006011,GO:0009103,GO:0030234;gene=galF;Parent=GCA000010485_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000183060,COG:COG1210,COG:M,KEGG:K00963,RefSeq:WP_000183060.1,SO:0001217,UniParc:UPI0000000053,UniRef:UniRef100_P0AAB6,UniRef:UniRef50_P0AAB6,UniRef:UniRef90_P0AAB6;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	2063416	2064810	.	-	.	ID=GCA000010485_02046_gene;locus_tag=GCA000010485_02046;gene=wcaM
contig_1	Pyrodigal	CDS	2063416	2064810	.	-	0	ID=GCA000010485_02046;Name=colanic acid biosynthesis protein WcaM;locus_tag=GCA000010485_02046;product=colanic acid biosynthesis protein WcaM;Dbxref=GO:0009103,GO:0045228;gene=wcaM;Parent=GCA000010485_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001115960.1,SO:0001217,UniParc:UPI0001C22EB1,UniRef:UniRef100_A0A7I0L2V0,UniRef:UniRef50_P71244,UniRef:UniRef90_P71244
contig_1	Pyrodigal	gene	2064821	2066041	.	-	.	ID=GCA000010485_02047_gene;locus_tag=GCA000010485_02047;gene=wcaL
contig_1	Pyrodigal	CDS	2064821	2066041	.	-	0	ID=GCA000010485_02047;Name=colanic acid biosynthesis glycosyltransferase WcaL;locus_tag=GCA000010485_02047;product=colanic acid biosynthesis glycosyltransferase WcaL;Dbxref=GO:0009103,GO:0016757,GO:0045228,GO:0046377;gene=wcaL;Parent=GCA000010485_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000862659.1,SO:0001217,UniParc:UPI0001C22EB2,UniRef:UniRef100_A0A7I0L106,UniRef:UniRef50_P71243,UniRef:UniRef90_P71243;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2066038	2067318	.	-	.	ID=GCA000010485_02048_gene;locus_tag=GCA000010485_02048;gene=wcaK
contig_1	Pyrodigal	CDS	2066038	2067318	.	-	0	ID=GCA000010485_02048;Name=colanic acid biosynthesis pyruvyl transferase WcaK;locus_tag=GCA000010485_02048;product=colanic acid biosynthesis pyruvyl transferase WcaK;Dbxref=GO:0009103,GO:0009242,GO:0016740,GO:0045228;gene=wcaK;Parent=GCA000010485_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16710,RefSeq:WP_000770778.1,SO:0001217,UniParc:UPI0001C22EB3,UniRef:UniRef100_A0A7I0L0Z3,UniRef:UniRef50_Q46637,UniRef:UniRef90_P71242;ec_number=2.-.-.-
contig_1	Infernal	gene	2067438	2067508	.	+	.	ID=GCA000010485_02049_gene;locus_tag=GCA000010485_02049;gene=naRNA4
contig_1	Infernal	ncRNA	2067438	2067508	6.8e-12	+	.	ID=GCA000010485_02049;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02049;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02049_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	2067534	2067605	.	+	.	ID=GCA000010485_02050_gene;locus_tag=GCA000010485_02050;gene=naRNA4
contig_1	Infernal	ncRNA	2067534	2067605	4.2e-10	+	.	ID=GCA000010485_02050;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02050;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02050_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	2067631	2067701	.	+	.	ID=GCA000010485_02051_gene;locus_tag=GCA000010485_02051;gene=naRNA4
contig_1	Infernal	ncRNA	2067631	2067701	4.9e-11	+	.	ID=GCA000010485_02051;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02051;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02051_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	2067727	2067797	.	+	.	ID=GCA000010485_02052_gene;locus_tag=GCA000010485_02052;gene=naRNA4
contig_1	Infernal	ncRNA	2067727	2067797	1.2e-09	+	.	ID=GCA000010485_02052;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02052;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02052_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2067882	2069360	.	-	.	ID=GCA000010485_02053_gene;locus_tag=GCA000010485_02053;gene=wzxC
contig_1	Pyrodigal	CDS	2067882	2069360	.	-	0	ID=GCA000010485_02053;Name=colanic acid undecaprenyl disphosphate flippase WzxC;locus_tag=GCA000010485_02053;product=colanic acid undecaprenyl disphosphate flippase WzxC;Dbxref=GO:0005886,GO:0009103,GO:0009242;gene=wzxC;Parent=GCA000010485_02053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000058424,BlastRules:WP_000058682,RefSeq:WP_000058495.1,SO:0001217,UniParc:UPI0001C22EB4,UniRef:UniRef100_A0A7I0L167,UniRef:UniRef50_P77377,UniRef:UniRef90_P77377
contig_1	Pyrodigal	gene	2069362	2070756	.	-	.	ID=GCA000010485_02054_gene;locus_tag=GCA000010485_02054;gene=wcaJ
contig_1	Pyrodigal	CDS	2069362	2070756	.	-	0	ID=GCA000010485_02054;Name=undecaprenyl-phosphate glucose phosphotransferase;locus_tag=GCA000010485_02054;product=undecaprenyl-phosphate glucose phosphotransferase;Dbxref=GO:0005886,GO:0009103,GO:0009242,GO:0016757,GO:0089702;gene=wcaJ;Parent=GCA000010485_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03606,RefSeq:WP_000183124.1,SO:0001217,UniParc:UPI00000DED59,UniRef:UniRef100_A0A086V0Z8,UniRef:UniRef50_P71241,UniRef:UniRef90_P71241;ec_number=2.7.8.31
contig_1	Pyrodigal	gene	2070811	2072181	.	-	.	ID=GCA000010485_02055_gene;locus_tag=GCA000010485_02055;gene=cpsG
contig_1	Pyrodigal	CDS	2070811	2072181	.	-	0	ID=GCA000010485_02055;Name=colanic acid biosynthesis phosphomannomutase CpsG;locus_tag=GCA000010485_02055;product=colanic acid biosynthesis phosphomannomutase CpsG;Dbxref=GO:0000287,GO:0004615,GO:0009103,GO:0009298;gene=cpsG;Parent=GCA000010485_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000164218,BlastRules:WP_001350528,RefSeq:WP_001546024.1,SO:0001217,UniParc:UPI0001C22EB5,UniRef:UniRef100_A0A7I0L0Z9,UniRef:UniRef50_P37742,UniRef:UniRef90_P24175;ec_number=5.4.2.8
contig_1	Infernal	regulatory_region	2072186	2072235	5.4e-14	-	.	ID=EFPPCJGBKI_308;Name=algC RNA;product=algC RNA;Dbxref=RFAM:RF02929;inference=profile:Rfam:RF02929;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2072374	2073810	.	-	.	ID=GCA000010485_02056_gene;locus_tag=GCA000010485_02056;gene=cpsB
contig_1	Pyrodigal	CDS	2072374	2073810	.	-	0	ID=GCA000010485_02056;Name=mannose-1-phosphate guanylyltransferase ManC;locus_tag=GCA000010485_02056;product=mannose-1-phosphate guanylyltransferase ManC;Dbxref=GO:0000271,GO:0004475,GO:0005525,GO:0006972,GO:0009103,GO:0009242,GO:0009298,GO:0016779;gene=cpsB;Parent=GCA000010485_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000605938,RefSeq:WP_000079254.1,SO:0001217,UniParc:UPI0001C22EB6,UniRef:UniRef100_UPI0001C22EB6,UniRef:UniRef50_P24174,UniRef:UniRef90_P24174;ec_number=2.7.7.13
contig_1	Pyrodigal	gene	2073813	2075027	.	-	.	ID=GCA000010485_02057_gene;locus_tag=GCA000010485_02057;gene=wcaI
contig_1	Pyrodigal	CDS	2073813	2075027	.	-	0	ID=GCA000010485_02057;Name=colanic acid biosynthesis fucosyltransferase WcaI;locus_tag=GCA000010485_02057;product=colanic acid biosynthesis fucosyltransferase WcaI;Dbxref=GO:0009103,GO:0009242,GO:0016757,GO:0045228,GO:0046920;gene=wcaI;Parent=GCA000010485_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000699632,KEGG:K03208,RefSeq:WP_000699753.1,SO:0001217,UniParc:UPI000191E7F7,UniRef:UniRef100_A0A7I0L9K0,UniRef:UniRef50_P32057,UniRef:UniRef90_P32057;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2075024	2075506	.	-	.	ID=GCA000010485_02058_gene;locus_tag=GCA000010485_02058;gene=gmm
contig_1	Pyrodigal	CDS	2075024	2075506	.	-	0	ID=GCA000010485_02058;Name=GDP-mannose mannosyl hydrolase;locus_tag=GCA000010485_02058;product=GDP-mannose mannosyl hydrolase;gene=gmm;Parent=GCA000010485_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001393539,KEGG:K03207,SO:0001217,UniRef:UniRef50_P32056,UniRef:UniRef90_A0A376U6P0;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	2075506	2076471	.	-	.	ID=GCA000010485_02059_gene;locus_tag=GCA000010485_02059;gene=fcl
contig_1	Pyrodigal	CDS	2075506	2076471	.	-	0	ID=GCA000010485_02059;Name=GDP-L-fucose synthase;locus_tag=GCA000010485_02059;product=GDP-L-fucose synthase;gene=fcl;Parent=GCA000010485_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000043654,KEGG:K02377,RefSeq:WP_000043618.1,SO:0001217,UniParc:UPI0000673AB9,UniRef:UniRef100_A0A066T4I1,UniRef:UniRef50_Q5JBH1,UniRef:UniRef90_A0A0G9G0U7;ec_number=1.1.1.271
contig_1	Pyrodigal	gene	2076474	2077595	.	-	.	ID=GCA000010485_02060_gene;locus_tag=GCA000010485_02060;gene=gmd
contig_1	Pyrodigal	CDS	2076474	2077595	.	-	0	ID=GCA000010485_02060;Name=GDP-mannose 4%2C6-dehydratase;locus_tag=GCA000010485_02060;product=GDP-mannose 4%2C6-dehydratase;Dbxref=GO:0000271,GO:0005737,GO:0008446,GO:0009242,GO:0019673,GO:0042351,GO:0042803,GO:0070401;gene=gmd;Parent=GCA000010485_02060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1089,COG:M,KEGG:K01711,RefSeq:WP_000048190.1,SO:0001217,UniParc:UPI000012B8A0,UniRef:UniRef100_P0AC88,UniRef:UniRef50_P0AC88,UniRef:UniRef90_P0AC88;ec_number=4.2.1.47
contig_1	Pyrodigal	gene	2077622	2078170	.	-	.	ID=GCA000010485_02061_gene;locus_tag=GCA000010485_02061;gene=wcaF
contig_1	Pyrodigal	CDS	2077622	2078170	.	-	0	ID=GCA000010485_02061;Name=colanic acid biosynthesis acetyltransferase WcaF;locus_tag=GCA000010485_02061;product=colanic acid biosynthesis acetyltransferase WcaF;Dbxref=GO:0005829,GO:0008374,GO:0009103,GO:0045228;gene=wcaF;Parent=GCA000010485_02061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001153547,BlastRules:WP_001153603,RefSeq:WP_001153549.1,SO:0001217,UniParc:UPI0001C22EB7,UniRef:UniRef100_A0A7I0L2U0,UniRef:UniRef50_P0ACD2,UniRef:UniRef90_P0ACD2;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2078186	2078932	.	-	.	ID=GCA000010485_02062_gene;locus_tag=GCA000010485_02062;gene=wcaE
contig_1	Pyrodigal	CDS	2078186	2078932	.	-	0	ID=GCA000010485_02062;Name=colanic acid biosynthesis glycosyltransferase WcaE;locus_tag=GCA000010485_02062;product=colanic acid biosynthesis glycosyltransferase WcaE;Dbxref=GO:0008417,GO:0009103,GO:0009242,GO:0045228;gene=wcaE;Parent=GCA000010485_02062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000927018.1,SO:0001217,UniParc:UPI0001C22EB8,UniRef:UniRef100_A0A7I0L0Z5,UniRef:UniRef50_P71239,UniRef:UniRef90_P71239;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2078943	2080160	.	-	.	ID=GCA000010485_02063_gene;locus_tag=GCA000010485_02063;gene=wcaD
contig_1	Pyrodigal	CDS	2078943	2080160	.	-	0	ID=GCA000010485_02063;Name=colanic acid polymerase WcaD;locus_tag=GCA000010485_02063;product=colanic acid polymerase WcaD;Dbxref=GO:0005886,GO:0009103,GO:0045228,GO:0046377;gene=wcaD;Parent=GCA000010485_02063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13620,RefSeq:WP_000107833.1,SO:0001217,UniParc:UPI0001C22EB9,UniRef:UniRef100_A0A3T7QUF7,UniRef:UniRef50_P71238,UniRef:UniRef90_P71238
contig_1	Pyrodigal	gene	2080135	2081352	.	-	.	ID=GCA000010485_02064_gene;locus_tag=GCA000010485_02064;gene=wcaC
contig_1	Pyrodigal	CDS	2080135	2081352	.	-	0	ID=GCA000010485_02064;Name=colanic acid biosynthesis glycosyltransferase WcaC;locus_tag=GCA000010485_02064;product=colanic acid biosynthesis glycosyltransferase WcaC;Dbxref=GO:0009103,GO:0009242,GO:0016757,GO:0035250,GO:0045228;gene=wcaC;Parent=GCA000010485_02064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13684,RefSeq:WP_001023854.1,SO:0001217,UniParc:UPI0001C22EBA,UniRef:UniRef100_A0A7I0L156,UniRef:UniRef50_P71237,UniRef:UniRef90_P71237;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	2081349	2081837	.	-	.	ID=GCA000010485_02065_gene;locus_tag=GCA000010485_02065;gene=wcaB
contig_1	Pyrodigal	CDS	2081349	2081837	.	-	0	ID=GCA000010485_02065;Name=colanic acid biosynthesis acetyltransferase WcaB;locus_tag=GCA000010485_02065;product=colanic acid biosynthesis acetyltransferase WcaB;gene=wcaB;Parent=GCA000010485_02065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000888714.1,SO:0001217,UniParc:UPI00005EF3BA,UniRef:UniRef100_A0A067HPV9,UniRef:UniRef50_P0ACC9,UniRef:UniRef90_A0A066T496;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2081840	2082679	.	-	.	ID=GCA000010485_02066_gene;locus_tag=GCA000010485_02066;gene=wcaA
contig_1	Pyrodigal	CDS	2081840	2082679	.	-	0	ID=GCA000010485_02066;Name=colanic acid biosynthesis glycosyltransferase WcaA;locus_tag=GCA000010485_02066;product=colanic acid biosynthesis glycosyltransferase WcaA;Dbxref=GO:0009103,GO:0009242,GO:0015020,GO:0016757,GO:0045228;gene=wcaA;Parent=GCA000010485_02066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_000654487.1,SO:0001217,UniParc:UPI00000DED65,UniRef:UniRef100_A0A023KPW6,UniRef:UniRef50_P77414,UniRef:UniRef90_P77414
contig_1	Pyrodigal	gene	2082772	2084934	.	-	.	ID=GCA000010485_02067_gene;locus_tag=GCA000010485_02067;gene=wzc
contig_1	Pyrodigal	CDS	2082772	2084934	.	-	0	ID=GCA000010485_02067;Name=tyrosine-protein kinase Wzc;locus_tag=GCA000010485_02067;product=tyrosine-protein kinase Wzc;Dbxref=GO:0004713,GO:0005524,GO:0005886,GO:0009103,GO:0009242,GO:0016020,GO:0016887,GO:0035401,GO:0042802,GO:0045226,GO:0140801;gene=wzc;Parent=GCA000010485_02067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000137176.1,SO:0001217,UniParc:UPI00005EF3BC,UniRef:UniRef100_A0A192ERV0,UniRef:UniRef50_P76387,UniRef:UniRef90_P76387;ec_number=2.7.10.-
contig_1	Pyrodigal	gene	2084937	2085380	.	-	.	ID=GCA000010485_02068_gene;locus_tag=GCA000010485_02068;gene=wzb
contig_1	Pyrodigal	CDS	2084937	2085380	.	-	0	ID=GCA000010485_02068;Name=low molecular weight protein-tyrosine-phosphatase Wzb;locus_tag=GCA000010485_02068;product=low molecular weight protein-tyrosine-phosphatase Wzb;Dbxref=GO:0000271,GO:0004725,GO:0004726,GO:0009242,GO:0030946,GO:0140793;gene=wzb;Parent=GCA000010485_02068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000482904.1,SO:0001217,UniParc:UPI0001C22EBC,UniRef:UniRef100_A0A3L4BGZ7,UniRef:UniRef50_P0AAB2,UniRef:UniRef90_P0AAB2;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2085386	2086525	.	-	.	ID=GCA000010485_02069_gene;locus_tag=GCA000010485_02069;gene=wza
contig_1	Pyrodigal	CDS	2085386	2086525	.	-	0	ID=GCA000010485_02069;Name=polysaccharide export protein Wza;locus_tag=GCA000010485_02069;product=polysaccharide export protein Wza;Dbxref=GO:0000271,GO:0006811,GO:0009279,GO:0015159,GO:0015288,GO:0015774,GO:0046377,GO:0046930;gene=wza;Parent=GCA000010485_02069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000978094,RefSeq:WP_000978094.1,SO:0001217,UniParc:UPI0000138FAE,UniRef:UniRef100_P0A930,UniRef:UniRef50_P0A930,UniRef:UniRef90_P0A930
contig_1	Infernal	regulatory_region	2086704	2086742	5.7e-12	-	.	ID=EFPPCJGBKI_317;Name=JUMPstart RNA;product=JUMPstart RNA;Dbxref=RFAM:RF01707;inference=profile:Rfam:RF01707;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2087183	2088766	.	+	.	ID=GCA000010485_02070_gene;locus_tag=GCA000010485_02070;gene=yegH
contig_1	Pyrodigal	CDS	2087183	2088766	.	+	0	ID=GCA000010485_02070;Name=UPF0053 protein YegH;locus_tag=GCA000010485_02070;product=UPF0053 protein YegH;Dbxref=GO:0005886,GO:0050660;gene=yegH;Parent=GCA000010485_02070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,RefSeq:WP_001546026.1,SO:0001217,UniParc:UPI0002A3ABE6,UniRef:UniRef100_A0A7I0LA30,UniRef:UniRef50_P76389,UniRef:UniRef90_P76389
contig_1	Pyrodigal	gene	2089218	2091071	.	-	.	ID=GCA000010485_02071_gene;locus_tag=GCA000010485_02071;gene=asmA
contig_1	Pyrodigal	CDS	2089218	2091071	.	-	0	ID=GCA000010485_02071;Name=outer membrane assembly protein AsmA;locus_tag=GCA000010485_02071;product=outer membrane assembly protein AsmA;Dbxref=GO:0005886,GO:0042597,GO:0090313;gene=asmA;Parent=GCA000010485_02071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2982,COG:M,KEGG:K07289,RefSeq:WP_001252356.1,SO:0001217,UniParc:UPI0001C22EBE,UniRef:UniRef100_A0A3K2YRE8,UniRef:UniRef50_P28249,UniRef:UniRef90_P28249
contig_1	Pyrodigal	gene	2091093	2091674	.	-	.	ID=GCA000010485_02072_gene;locus_tag=GCA000010485_02072;gene=dcd
contig_1	Pyrodigal	CDS	2091093	2091674	.	-	0	ID=GCA000010485_02072;Name=dCTP deaminase;locus_tag=GCA000010485_02072;product=dCTP deaminase;Dbxref=GO:0000166,GO:0006226,GO:0006229,GO:0008829,GO:0015949;gene=dcd;Parent=GCA000010485_02072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0717,COG:F,KEGG:K01494,RefSeq:WP_001234767.1,SO:0001217,UniParc:UPI000000E365,UniRef:UniRef100_A7ZNN9,UniRef:UniRef50_P28248,UniRef:UniRef90_P28248;ec_number=3.5.4.13
contig_1	Pyrodigal	gene	2091766	2092407	.	-	.	ID=GCA000010485_02073_gene;locus_tag=GCA000010485_02073;gene=udk
contig_1	Pyrodigal	CDS	2091766	2092407	.	-	0	ID=GCA000010485_02073;Name=uridine kinase;locus_tag=GCA000010485_02073;product=uridine kinase;Dbxref=GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211;gene=udk;Parent=GCA000010485_02073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,KEGG:K00876,RefSeq:WP_001295424.1,SO:0001217,UniParc:UPI0000137E07,UniRef:UniRef100_P0A8F4,UniRef:UniRef50_P0A8F4,UniRef:UniRef90_P0A8F4;ec_number=2.7.1.48
contig_1	Pyrodigal	gene	2092725	2096042	.	+	.	ID=GCA000010485_02074_gene;locus_tag=GCA000010485_02074;gene=dgcE
contig_1	Pyrodigal	CDS	2092725	2096042	.	+	0	ID=GCA000010485_02074;Name=diguanylate cyclase;locus_tag=GCA000010485_02074;product=diguanylate cyclase;Dbxref=GO:0005515,GO:0005525,GO:0005886,GO:0046872,GO:0052621,GO:1900231;gene=dgcE;Parent=GCA000010485_02074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000043717.1,SO:0001217,UniParc:UPI0001C22EBF,UniRef:UniRef100_A0A7I0L0X4,UniRef:UniRef50_P38097,UniRef:UniRef90_P38097;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	2096152	2097000	.	-	.	ID=GCA000010485_02075_gene;locus_tag=GCA000010485_02075;gene=alkA
contig_1	Pyrodigal	CDS	2096152	2097000	.	-	0	ID=GCA000010485_02075;Name=DNA-3-methyladenine glycosylase 2;locus_tag=GCA000010485_02075;product=DNA-3-methyladenine glycosylase 2;Dbxref=GO:0003824,GO:0003905,GO:0005737,GO:0006281,GO:0006284,GO:0006285,GO:0006307,GO:0006974,GO:0008725,GO:0032131,GO:0032993,GO:0043916,GO:0052821,GO:0052822,GO:1990053;gene=alkA;Parent=GCA000010485_02075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0122,COG:L,RefSeq:WP_000288359.1,SO:0001217,UniParc:UPI0001C22EC0,UniRef:UniRef100_A0A7I0L146,UniRef:UniRef50_P04395,UniRef:UniRef90_P04395;ec_number=3.2.2.21
contig_1	Pyrodigal	gene	2097134	2098486	.	+	.	ID=GCA000010485_02076_gene;locus_tag=GCA000010485_02076;gene=yegD
contig_1	Pyrodigal	CDS	2097134	2098486	.	+	0	ID=GCA000010485_02076;Name=molecular chaperone;locus_tag=GCA000010485_02076;product=molecular chaperone;Dbxref=GO:0005524,GO:0005829,GO:0016887,GO:0031072,GO:0042026,GO:0044183,GO:0051085,GO:0140662;gene=yegD;Parent=GCA000010485_02076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_000469704.1,SO:0001217,UniParc:UPI0001C22EC1,UniRef:UniRef100_A0A061YER6,UniRef:UniRef50_P36928,UniRef:UniRef90_P36928
contig_1	Pyrodigal	gene	2098499	2100439	.	-	.	ID=GCA000010485_02077_gene;locus_tag=GCA000010485_02077;gene=yegI
contig_1	Pyrodigal	CDS	2098499	2100439	.	-	0	ID=GCA000010485_02077;Name=protein kinase YegI;locus_tag=GCA000010485_02077;product=protein kinase YegI;Dbxref=GO:0004672,GO:0005524;gene=yegI;Parent=GCA000010485_02077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000856081,RefSeq:WP_001546027.1,SO:0001217,UniParc:UPI0001C22EC2,UniRef:UniRef100_A0A7I0L0Y0,UniRef:UniRef50_P76393,UniRef:UniRef90_P76393;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	2100436	2101116	.	-	.	ID=GCA000010485_02078_gene;locus_tag=GCA000010485_02078;gene=pphC
contig_1	Pyrodigal	CDS	2100436	2101116	.	-	0	ID=GCA000010485_02078;Name=Serine/threonine-protein phosphatase 3;locus_tag=GCA000010485_02078;product=Serine/threonine-protein phosphatase 3;Dbxref=GO:0016791,GO:0017018,GO:0033192,GO:0140791,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990439;gene=pphC;Parent=GCA000010485_02078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P76395,UniRef:UniRef90_P76395;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	2101194	2101853	.	-	.	ID=GCA000010485_02079_gene;locus_tag=GCA000010485_02079;gene=yegL
contig_1	Pyrodigal	CDS	2101194	2101853	.	-	0	ID=GCA000010485_02079;Name=putative protein YegL;locus_tag=GCA000010485_02079;product=putative protein YegL;gene=yegL;Parent=GCA000010485_02079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4245,COG:S,RefSeq:WP_000003163.1,SO:0001217,UniParc:UPI00005EF3C6,UniRef:UniRef100_A0A178QYC3,UniRef:UniRef50_P76396,UniRef:UniRef90_P76396
contig_1	Infernal	gene	2102000	2102149	.	+	.	ID=GCA000010485_02080_gene;locus_tag=GCA000010485_02080;gene=SIB_RNA
contig_1	Infernal	ncRNA	2102000	2102149	3.6e-24	+	.	ID=GCA000010485_02080;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_02080;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_02080_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	2102075	2102134	.	-	.	ID=GCA000010485_02081_gene;locus_tag=GCA000010485_02081;inference=ab initio prediction:Bakta;gene=ibsA
contig_1	Bakta	CDS	2102075	2102134	.	-	0	ID=GCA000010485_02081;Name=Small toxic protein IbsA;locus_tag=GCA000010485_02081;product=Small toxic protein IbsA;Dbxref=GO:0012501;gene=ibsA;Parent=GCA000010485_02081_gene;Note=RefSeq:WP_010723109.1,SO:0001217,UniParc:UPI000199A546,UniRef:UniRef100_C1P607,UniRef:UniRef50_C1P607,UniRef:UniRef90_C1P607
contig_1	Infernal	gene	2102336	2102478	.	+	.	ID=GCA000010485_02082_gene;locus_tag=GCA000010485_02082;gene=SIB_RNA
contig_1	Infernal	ncRNA	2102336	2102478	5.2e-23	+	.	ID=GCA000010485_02082;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_02082;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_02082_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	2102407	2102463	.	-	.	ID=GCA000010485_02083_gene;locus_tag=GCA000010485_02083;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2102407	2102463	.	-	0	ID=GCA000010485_02083;Name=Type I toxin-antitoxin system Ibs family toxin;locus_tag=GCA000010485_02083;product=Type I toxin-antitoxin system Ibs family toxin;Parent=GCA000010485_02083_gene;Note=RefSeq:WP_100249772.1,SO:0001217,UniParc:UPI0004598BC4,UniRef:UniRef100_A0A2I1SH74,UniRef:UniRef50_A0A2I1SH74,UniRef:UniRef90_A0A2I1SH74
contig_1	Infernal	gene	2102664	2102806	.	+	.	ID=GCA000010485_02084_gene;locus_tag=GCA000010485_02084;gene=SIB_RNA
contig_1	Infernal	ncRNA	2102664	2102806	7.3e-23	+	.	ID=GCA000010485_02084;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_02084;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_02084_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	2102735	2102791	.	-	.	ID=GCA000010485_02085_gene;locus_tag=GCA000010485_02085;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2102735	2102791	.	-	0	ID=GCA000010485_02085;Name=Type I toxin-antitoxin system Ibs family toxin;locus_tag=GCA000010485_02085;product=Type I toxin-antitoxin system Ibs family toxin;Parent=GCA000010485_02085_gene;Note=RefSeq:WP_012767741.1,SO:0001217,UniParc:UPI0001F3088F,UniRef:UniRef100_A0A2V2MWM4,UniRef:UniRef50_A0A2J7LA17,UniRef:UniRef90_A0A2J7LA17
contig_1	Infernal	gene	2102992	2103134	.	+	.	ID=GCA000010485_02086_gene;locus_tag=GCA000010485_02086;gene=SIB_RNA
contig_1	Infernal	ncRNA	2102992	2103134	1.4e-22	+	.	ID=GCA000010485_02086;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_02086;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_02086_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	2103063	2103119	.	-	.	ID=GCA000010485_02087_gene;locus_tag=GCA000010485_02087;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2103063	2103119	.	-	0	ID=GCA000010485_02087;Name=Type I toxin-antitoxin system Ibs family toxin;locus_tag=GCA000010485_02087;product=Type I toxin-antitoxin system Ibs family toxin;Parent=GCA000010485_02087_gene;Note=RefSeq:WP_012767742.1,SO:0001217,UniParc:UPI0001F30890,UniRef:UniRef100_A0A2I1NQI3,UniRef:UniRef50_A0A2I1NQI3,UniRef:UniRef90_A0A2I1NQI3
contig_1	Pyrodigal	gene	2103398	2104645	.	+	.	ID=GCA000010485_02088_gene;locus_tag=GCA000010485_02088;gene=mdtA
contig_1	Pyrodigal	CDS	2103398	2104645	.	+	0	ID=GCA000010485_02088;Name=multidrug efflux RND transporter subunit MdtA;locus_tag=GCA000010485_02088;product=multidrug efflux RND transporter subunit MdtA;Dbxref=GO:0005886,GO:0015562,GO:0016020,GO:0022857,GO:0055085,GO:1990281;gene=mdtA;Parent=GCA000010485_02088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000678822,BlastRules:WP_000678989,KEGG:K07799,RefSeq:WP_000678941.1,SO:0001217,UniParc:UPI0001C22B43,UniRef:UniRef100_F4T1E4,UniRef:UniRef50_P76397,UniRef:UniRef90_P76397
contig_1	Pyrodigal	gene	2104645	2107767	.	+	.	ID=GCA000010485_02089_gene;locus_tag=GCA000010485_02089;gene=mdtB
contig_1	Pyrodigal	CDS	2104645	2107767	.	+	0	ID=GCA000010485_02089;Name=multidrug efflux RND transporter permease subunit MdtB;locus_tag=GCA000010485_02089;product=multidrug efflux RND transporter permease subunit MdtB;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0042910,GO:0055085;gene=mdtB;Parent=GCA000010485_02089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001197805,BlastRules:WP_001197875,RefSeq:WP_001197836.1,SO:0001217,UniParc:UPI0000DACEE9,UniRef:UniRef100_Q0TG15,UniRef:UniRef50_P76398,UniRef:UniRef90_P76398
contig_1	Pyrodigal	gene	2107768	2110845	.	+	.	ID=GCA000010485_02090_gene;locus_tag=GCA000010485_02090;gene=mdtC
contig_1	Pyrodigal	CDS	2107768	2110845	.	+	0	ID=GCA000010485_02090;Name=multidrug efflux RND transporter permease subunit MdtC;locus_tag=GCA000010485_02090;product=multidrug efflux RND transporter permease subunit MdtC;Dbxref=GO:0005886,GO:0042910,GO:0055085;gene=mdtC;Parent=GCA000010485_02090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000667481,BlastRules:WP_001210077,COG:COG0841,COG:V,KEGG:K07789,RefSeq:WP_000667564.1,SO:0001217,UniParc:UPI0001C22B44,UniRef:UniRef100_A0A061YI98,UniRef:UniRef50_P76399,UniRef:UniRef90_P76399
contig_1	Pyrodigal	gene	2110846	2112261	.	+	.	ID=GCA000010485_02091_gene;locus_tag=GCA000010485_02091;gene=mdtD
contig_1	Pyrodigal	CDS	2110846	2112261	.	+	0	ID=GCA000010485_02091;Name=Putative multidrug resistance protein MdtD;locus_tag=GCA000010485_02091;product=Putative multidrug resistance protein MdtD;Dbxref=GO:0005886,GO:0022857;gene=mdtD;Parent=GCA000010485_02091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18326,RefSeq:WP_000130870.1,SO:0001217,UniParc:UPI00005EF3CA,UniRef:UniRef100_A0A135XC34,UniRef:UniRef50_P36554,UniRef:UniRef90_Q0T353
contig_1	Pyrodigal	gene	2112258	2113661	.	+	.	ID=GCA000010485_02092_gene;locus_tag=GCA000010485_02092;gene=baeS
contig_1	Pyrodigal	CDS	2112258	2113661	.	+	0	ID=GCA000010485_02092;Name=two-component system sensor histidine kinase BaeS;locus_tag=GCA000010485_02092;product=two-component system sensor histidine kinase BaeS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0016310,GO:0036460;gene=baeS;Parent=GCA000010485_02092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,RefSeq:WP_000675176.1,SO:0001217,UniParc:UPI0001C22B45,UniRef:UniRef100_A0A066T480,UniRef:UniRef50_P30847,UniRef:UniRef90_P30847;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2113658	2114380	.	+	.	ID=GCA000010485_02093_gene;locus_tag=GCA000010485_02093;gene=baeR
contig_1	Pyrodigal	CDS	2113658	2114380	.	+	0	ID=GCA000010485_02093;Name=two-component system response regulator BaeR;locus_tag=GCA000010485_02093;product=two-component system response regulator BaeR;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0000987,GO:0003677,GO:0005829,GO:0006355,GO:0032993,GO:0042802,GO:2000144,GO:2001023;gene=baeR;Parent=GCA000010485_02093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000137877.1,SO:0001217,UniParc:UPI000012675F,UniRef:UniRef100_P69228,UniRef:UniRef50_P69228,UniRef:UniRef90_P69228
contig_1	Pyrodigal	gene	2114560	2114727	.	+	.	ID=GCA000010485_02094_gene;locus_tag=GCA000010485_02094
contig_1	Pyrodigal	CDS	2114560	2114727	.	+	0	ID=GCA000010485_02094;Name=DUF1508 domain-containing protein;locus_tag=GCA000010485_02094;product=DUF1508 domain-containing protein;Parent=GCA000010485_02094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAX2BPJ4
contig_1	Pyrodigal	gene	2115039	2116400	.	+	.	ID=GCA000010485_02095_gene;locus_tag=GCA000010485_02095;gene=yegQ
contig_1	Pyrodigal	CDS	2115039	2116400	.	+	0	ID=GCA000010485_02095;Name=tRNA 5-hydroxyuridine modification protein YegQ;locus_tag=GCA000010485_02095;product=tRNA 5-hydroxyuridine modification protein YegQ;Dbxref=GO:0002098,GO:0005829,GO:0006400,GO:0006508,GO:0008233;gene=yegQ;Parent=GCA000010485_02095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_000476014.1,SO:0001217,UniParc:UPI00000D0A59,UniRef:UniRef100_C3SCR5,UniRef:UniRef50_P76403,UniRef:UniRef90_P76403;ec_number=3.4.-.-
contig_1	Infernal	gene	2116483	2116568	.	+	.	ID=GCA000010485_02096_gene;locus_tag=GCA000010485_02096;gene=CyaR_RyeE
contig_1	Infernal	ncRNA	2116483	2116568	8e-16	+	.	ID=GCA000010485_02096;Name=CyaR/Rye RNA;locus_tag=GCA000010485_02096;product=CyaR/Rye RNA;Dbxref=RFAM:RF00112;Parent=GCA000010485_02096_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00112
contig_1	Pyrodigal	gene	2116900	2117217	.	-	.	ID=GCA000010485_02097_gene;locus_tag=GCA000010485_02097;gene=yegR
contig_1	Pyrodigal	CDS	2116900	2117217	.	-	0	ID=GCA000010485_02097;Name=putative protein YegR;locus_tag=GCA000010485_02097;product=putative protein YegR;gene=yegR;Parent=GCA000010485_02097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531820.1,SO:0001217,UniParc:UPI0002A236B2,UniRef:UniRef100_A0A1U9TR50,UniRef:UniRef50_P76406,UniRef:UniRef90_P76406
contig_1	Pyrodigal	gene	2117632	2118531	.	+	.	ID=GCA000010485_02098_gene;locus_tag=GCA000010485_02098;gene=yegS
contig_1	Pyrodigal	CDS	2117632	2118531	.	+	0	ID=GCA000010485_02098;Name=lipid kinase YegS;locus_tag=GCA000010485_02098;product=lipid kinase YegS;Dbxref=GO:0000287,GO:0001727,GO:0005524,GO:0005737,GO:0005886,GO:0008654,GO:0046872;gene=yegS;Parent=GCA000010485_02098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_000807341.1,SO:0001217,UniParc:UPI00005EF3D0,UniRef:UniRef100_Q0TG03,UniRef:UniRef50_P76407,UniRef:UniRef90_P76407;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2118613	2119392	.	-	.	ID=GCA000010485_02099_gene;locus_tag=GCA000010485_02099;gene=glpR
contig_1	Pyrodigal	CDS	2118613	2119392	.	-	0	ID=GCA000010485_02099;Name=Transcriptional regulator;locus_tag=GCA000010485_02099;product=Transcriptional regulator;gene=glpR;Parent=GCA000010485_02099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02436,SO:0001217,UniParc:UPI00000DED79,UniRef:UniRef100_A0A0D6IW18,UniRef:UniRef50_A0A659QSE0,UniRef:UniRef90_J7QSW1
contig_1	Pyrodigal	gene	2119492	2120532	.	-	.	ID=GCA000010485_02100_gene;locus_tag=GCA000010485_02100;gene=gatD
contig_1	Pyrodigal	CDS	2119492	2120532	.	-	0	ID=GCA000010485_02100;Name=galactitol-1-phosphate 5-dehydrogenase;locus_tag=GCA000010485_02100;product=galactitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0005829,GO:0008270,GO:0008868,GO:0016491,GO:0019404,GO:0042802,GO:0042803;gene=gatD;Parent=GCA000010485_02100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K00094,RefSeq:WP_000844233.1,SO:0001217,UniParc:UPI00005EF3D1,UniRef:UniRef100_A0A066SW85,UniRef:UniRef50_P0A9S3,UniRef:UniRef90_P0A9S3;ec_number=1.1.1.251
contig_1	Pyrodigal	gene	2120580	2121935	.	-	.	ID=GCA000010485_02101_gene;locus_tag=GCA000010485_02101;gene=gatB
contig_1	Pyrodigal	CDS	2120580	2121935	.	-	0	ID=GCA000010485_02101;Name=PTS galactitol transporter subunit IIB;locus_tag=GCA000010485_02101;product=PTS galactitol transporter subunit IIB;Dbxref=GO:0005886,GO:0009401,GO:0015577,GO:0015796,GO:0019402,GO:0090584,GO:1902495;gene=gatB;Parent=GCA000010485_02101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02775,RefSeq:WP_000490658.1,SO:0001217,UniParc:UPI0001C22B48,UniRef:UniRef100_A0A7I0L2R7,UniRef:UniRef50_P69831,UniRef:UniRef90_P69831;ec_number=2.7.1.200
contig_1	Pyrodigal	gene	2121939	2122223	.	-	.	ID=GCA000010485_02102_gene;locus_tag=GCA000010485_02102;gene=gatB
contig_1	Pyrodigal	CDS	2121939	2122223	.	-	0	ID=GCA000010485_02102;Name=PTS galactitol transporter subunit IIB;locus_tag=GCA000010485_02102;product=PTS galactitol transporter subunit IIB;Dbxref=GO:0005886,GO:0009401,GO:0015577,GO:0015796,GO:0019402,GO:0090584,GO:1902495;gene=gatB;Parent=GCA000010485_02102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02775,RefSeq:WP_000823284.1,SO:0001217,UniParc:UPI0001C22B49,UniRef:UniRef100_A0AAW8PDK5,UniRef:UniRef50_P69831,UniRef:UniRef90_P69831;ec_number=2.7.1.200
contig_1	Pyrodigal	gene	2122254	2122706	.	-	.	ID=GCA000010485_02103_gene;locus_tag=GCA000010485_02103;gene=gatA
contig_1	Pyrodigal	CDS	2122254	2122706	.	-	0	ID=GCA000010485_02103;Name=PTS galactitol transporter subunit IIA;locus_tag=GCA000010485_02103;product=PTS galactitol transporter subunit IIA;Dbxref=GO:0005829,GO:0009401,GO:0015796,GO:0016301,GO:0019402,GO:0030295,GO:0090584,GO:1902495;gene=gatA;Parent=GCA000010485_02103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182880.1,SO:0001217,UniParc:UPI0001C22B4A,UniRef:UniRef100_A0A066SVU4,UniRef:UniRef50_P69828,UniRef:UniRef90_P69828;ec_number=2.7.1.200
contig_1	Pyrodigal	gene	2122716	2123978	.	-	.	ID=GCA000010485_02104_gene;locus_tag=GCA000010485_02104;gene=gatZ
contig_1	Pyrodigal	CDS	2122716	2123978	.	-	0	ID=GCA000010485_02104;Name=tagatose-bisphosphate aldolase subunit GatZ;locus_tag=GCA000010485_02104;product=tagatose-bisphosphate aldolase subunit GatZ;Dbxref=GO:0005886,GO:0009401,GO:0019402,GO:2001059;gene=gatZ;Parent=GCA000010485_02104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16371,RefSeq:WP_000853832.1,SO:0001217,UniParc:UPI0001C22B4B,UniRef:UniRef100_A0A066SW81,UniRef:UniRef50_P0C8J8,UniRef:UniRef90_P0C8J8;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	2124007	2124861	.	-	.	ID=GCA000010485_02105_gene;locus_tag=GCA000010485_02105;gene=gatY
contig_1	Pyrodigal	CDS	2124007	2124861	.	-	0	ID=GCA000010485_02105;Name=tagatose-bisphosphate aldolase subunit GatY;locus_tag=GCA000010485_02105;product=tagatose-bisphosphate aldolase subunit GatY;Dbxref=GO:0005829,GO:0005975,GO:0008270,GO:0009025,GO:0019404,GO:2001059;gene=gatY;Parent=GCA000010485_02105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001307281,COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_000289802.1,SO:0001217,UniParc:UPI0001C22B4C,UniRef:UniRef100_A0A066T4E1,UniRef:UniRef50_P0C8J6,UniRef:UniRef90_P0C8J6;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	2125088	2126140	.	-	.	ID=GCA000010485_02106_gene;locus_tag=GCA000010485_02106;gene=fbaB
contig_1	Pyrodigal	CDS	2125088	2126140	.	-	0	ID=GCA000010485_02106;Name=class I fructose-bisphosphate aldolase;locus_tag=GCA000010485_02106;product=class I fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0005829,GO:0006096,GO:0016020,GO:0042802;gene=fbaB;Parent=GCA000010485_02106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1830,COG:G,RefSeq:WP_000129551.1,SO:0001217,UniParc:UPI00001B511E,UniRef:UniRef100_P0A991,UniRef:UniRef50_P0A991,UniRef:UniRef90_P0A991;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2126397	2127674	.	+	.	ID=GCA000010485_02107_gene;locus_tag=GCA000010485_02107;gene=yegT
contig_1	Pyrodigal	CDS	2126397	2127674	.	+	0	ID=GCA000010485_02107;Name=Putative nucleoside transporter YegT;locus_tag=GCA000010485_02107;product=Putative nucleoside transporter YegT;Dbxref=GO:0005886,GO:0015212,GO:0015213;gene=yegT;Parent=GCA000010485_02107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05820,RefSeq:WP_000858523.1,SO:0001217,UniParc:UPI0000D50A54,UniRef:UniRef100_E2QNW6,UniRef:UniRef50_P76417,UniRef:UniRef90_P76417
contig_1	Pyrodigal	gene	2127671	2128675	.	+	.	ID=GCA000010485_02108_gene;locus_tag=GCA000010485_02108
contig_1	Pyrodigal	CDS	2127671	2128675	.	+	0	ID=GCA000010485_02108;Name=ADP-ribosylglycohydrolase family protein;locus_tag=GCA000010485_02108;product=ADP-ribosylglycohydrolase family protein;Parent=GCA000010485_02108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846228.1,SO:0001217,UniParc:UPI0001C22B4D,UniRef:UniRef100_A0A066SVT9,UniRef:UniRef90_P76418
contig_1	Pyrodigal	gene	2128672	2129637	.	+	.	ID=GCA000010485_02109_gene;locus_tag=GCA000010485_02109;gene=yegV
contig_1	Pyrodigal	CDS	2128672	2129637	.	+	0	ID=GCA000010485_02109;Name=putative sugar kinase YegV;locus_tag=GCA000010485_02109;product=putative sugar kinase YegV;Dbxref=GO:0006796,GO:0016301;gene=yegV;Parent=GCA000010485_02109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,RefSeq:WP_000011972.1,SO:0001217,UniParc:UPI0001C22B4E,UniRef:UniRef100_A0A135XBP2,UniRef:UniRef50_P76419,UniRef:UniRef90_P76419;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2129611	2130357	.	-	.	ID=GCA000010485_02110_gene;locus_tag=GCA000010485_02110;gene=yegW
contig_1	Pyrodigal	CDS	2129611	2130357	.	-	0	ID=GCA000010485_02110;Name=putative HTH-type transcriptional regulator YegW;locus_tag=GCA000010485_02110;product=putative HTH-type transcriptional regulator YegW;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=yegW;Parent=GCA000010485_02110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_000434047.1,SO:0001217,UniParc:UPI0001C22B4F,UniRef:UniRef100_A0A061L895,UniRef:UniRef50_P0ACM5,UniRef:UniRef90_P0ACM5
contig_1	Pyrodigal	gene	2130409	2131227	.	-	.	ID=GCA000010485_02111_gene;locus_tag=GCA000010485_02111;gene=yegX
contig_1	Pyrodigal	CDS	2130409	2131227	.	-	0	ID=GCA000010485_02111;Name=putative protein YegX;locus_tag=GCA000010485_02111;product=putative protein YegX;Dbxref=GO:0003796,GO:0009253,GO:0016052,GO:0016998;gene=yegX;Parent=GCA000010485_02111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07273,RefSeq:WP_001296225.1,SO:0001217,UniParc:UPI0001C22B50,UniRef:UniRef100_A0A061YCU8,UniRef:UniRef50_Q8X7H0,UniRef:UniRef90_Q8FFY2
contig_1	Pyrodigal	gene	2131292	2132092	.	-	.	ID=GCA000010485_02112_gene;locus_tag=GCA000010485_02112;gene=thiD
contig_1	Pyrodigal	CDS	2131292	2132092	.	-	0	ID=GCA000010485_02112;Name=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;locus_tag=GCA000010485_02112;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229,GO:0036172;gene=thiD;Parent=GCA000010485_02112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001188957,COG:COG0351,COG:H,RefSeq:WP_000822280.1,SO:0001217,UniParc:UPI0001887675,UniRef:UniRef100_A0A023LFZ1,UniRef:UniRef50_P76422,UniRef:UniRef90_P76422;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	2132089	2132877	.	-	.	ID=GCA000010485_02113_gene;locus_tag=GCA000010485_02113;gene=thiM
contig_1	Pyrodigal	CDS	2132089	2132877	.	-	0	ID=GCA000010485_02113;Name=hydroxyethylthiazole kinase;locus_tag=GCA000010485_02113;product=hydroxyethylthiazole kinase;Dbxref=GO:0000287,GO:0004417,GO:0005524,GO:0009228,GO:0009229;gene=thiM;Parent=GCA000010485_02113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2145,COG:H,KEGG:K00878,RefSeq:WP_001195621.1,SO:0001217,UniParc:UPI0001C22B51,UniRef:UniRef100_A0A066SVT5,UniRef:UniRef50_P76423,UniRef:UniRef90_P76423;ec_number=2.7.1.50
contig_1	Infernal	regulatory_region	2132912	2133008	1.6e-11	-	.	ID=EFPPCJGBKI_319;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	2133100	2133372	.	-	.	ID=GCA000010485_02114_gene;locus_tag=GCA000010485_02114;gene=rcnR
contig_1	Pyrodigal	CDS	2133100	2133372	.	-	0	ID=GCA000010485_02114;Name=Ni(II)/Co(II)-binding transcriptional repressor RcnR;locus_tag=GCA000010485_02114;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;Dbxref=GO:0003677,GO:0005737,GO:0045892,GO:0046872;gene=rcnR;Parent=GCA000010485_02114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1937,COG:K,KEGG:K23240,RefSeq:WP_000019944.1,SO:0001217,UniParc:UPI000013BC89,UniRef:UniRef100_P64530,UniRef:UniRef50_P64530,UniRef:UniRef90_P64530
contig_1	Pyrodigal	gene	2133493	2134317	.	+	.	ID=GCA000010485_02115_gene;locus_tag=GCA000010485_02115;gene=rcnA
contig_1	Pyrodigal	CDS	2133493	2134317	.	+	0	ID=GCA000010485_02115;Name=nickel/cobalt efflux protein RcnA;locus_tag=GCA000010485_02115;product=nickel/cobalt efflux protein RcnA;Dbxref=GO:0005886,GO:0006824,GO:0010045,GO:0015099,GO:0032025,GO:0046583;gene=rcnA;Parent=GCA000010485_02115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000134636,COG:COG2215,COG:P,RefSeq:WP_000134616.1,SO:0001217,UniParc:UPI0001C22B52,UniRef:UniRef100_A0A061YDY9,UniRef:UniRef50_P76425,UniRef:UniRef90_P76425
contig_1	Pyrodigal	gene	2134536	2134874	.	+	.	ID=GCA000010485_02116_gene;locus_tag=GCA000010485_02116;gene=rcnB
contig_1	Pyrodigal	CDS	2134536	2134874	.	+	0	ID=GCA000010485_02116;Name=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;locus_tag=GCA000010485_02116;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;Dbxref=GO:0005507,GO:0005829,GO:0006974,GO:0010045,GO:0030288,GO:0032025,GO:1901652;gene=rcnB;Parent=GCA000010485_02116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000153067,COG:COG5455,COG:P,KEGG:K23243,RefSeq:WP_000153067.1,SO:0001217,UniParc:UPI000013BC8B,UniRef:UniRef100_P64534,UniRef:UniRef50_P64534,UniRef:UniRef90_P64534
contig_1	Pyrodigal	gene	2134956	2135990	.	-	.	ID=GCA000010485_02117_gene;locus_tag=GCA000010485_02117;gene=yehA
contig_1	Pyrodigal	CDS	2134956	2135990	.	-	0	ID=GCA000010485_02117;Name=putative fimbrial-like adhesin protein;locus_tag=GCA000010485_02117;product=putative fimbrial-like adhesin protein;Dbxref=GO:0009289,GO:0043709;gene=yehA;Parent=GCA000010485_02117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000405718.1,SO:0001217,UniParc:UPI0001C22B53,UniRef:UniRef100_A0A066SZQ9,UniRef:UniRef50_P33340,UniRef:UniRef90_P33340
contig_1	Pyrodigal	gene	2136006	2138486	.	-	.	ID=GCA000010485_02118_gene;locus_tag=GCA000010485_02118;gene=papC
contig_1	Pyrodigal	CDS	2136006	2138486	.	-	0	ID=GCA000010485_02118;Name=PapC N-terminal domain-containing protein;locus_tag=GCA000010485_02118;product=PapC N-terminal domain-containing protein;gene=papC;Parent=GCA000010485_02118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07347,RefSeq:WP_000945369.1,SO:0001217,UniParc:UPI0001C22B54,UniRef:UniRef100_A0A061Y6J2,UniRef:UniRef50_P33341,UniRef:UniRef90_A0A5C9ABQ1
contig_1	Pyrodigal	gene	2138502	2139176	.	-	.	ID=GCA000010485_02119_gene;locus_tag=GCA000010485_02119;gene=yehC
contig_1	Pyrodigal	CDS	2138502	2139176	.	-	0	ID=GCA000010485_02119;Name=putative fimbrial chaperone YehC;locus_tag=GCA000010485_02119;product=putative fimbrial chaperone YehC;Dbxref=GO:0030288,GO:0061077,GO:0071555;gene=yehC;Parent=GCA000010485_02119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000677331.1,SO:0001217,UniParc:UPI0001C22B55,UniRef:UniRef100_A0A061L7I5,UniRef:UniRef50_P33342,UniRef:UniRef90_P33342
contig_1	Pyrodigal	gene	2139257	2139799	.	-	.	ID=GCA000010485_02120_gene;locus_tag=GCA000010485_02120;gene=yehD
contig_1	Pyrodigal	CDS	2139257	2139799	.	-	0	ID=GCA000010485_02120;Name=putative fimbrial-like protein YehD;locus_tag=GCA000010485_02120;product=putative fimbrial-like protein YehD;Dbxref=GO:0007155,GO:0009289,GO:0043709;gene=yehD;Parent=GCA000010485_02120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000830464.1,SO:0001217,UniParc:UPI0001C22B56,UniRef:UniRef100_A0A061YDZ6,UniRef:UniRef50_P33343,UniRef:UniRef90_P33343
contig_1	Pyrodigal	gene	2140092	2140373	.	-	.	ID=GCA000010485_02121_gene;locus_tag=GCA000010485_02121;gene=yehE
contig_1	Pyrodigal	CDS	2140092	2140373	.	-	0	ID=GCA000010485_02121;Name=putative protein YehE;locus_tag=GCA000010485_02121;product=putative protein YehE;gene=yehE;Parent=GCA000010485_02121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001046487.1,SO:0001217,UniParc:UPI00000E4A29,UniRef:UniRef100_E2QNY0,UniRef:UniRef50_P33344,UniRef:UniRef90_P33344
contig_1	Pyrodigal	gene	2140636	2141745	.	-	.	ID=GCA000010485_02122_gene;locus_tag=GCA000010485_02122;gene=apbC
contig_1	Pyrodigal	CDS	2140636	2141745	.	-	0	ID=GCA000010485_02122;Name=iron-sulfur cluster carrier protein ApbC;locus_tag=GCA000010485_02122;product=iron-sulfur cluster carrier protein ApbC;Dbxref=GO:0005524,GO:0005829,GO:0016226,GO:0016887,GO:0046872,GO:0051536,GO:0051539,GO:0140663;gene=apbC;Parent=GCA000010485_02122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_001005448.1,SO:0001217,UniParc:UPI000012F57F,UniRef:UniRef100_P0AF08,UniRef:UniRef50_Q8ZNN5,UniRef:UniRef90_Q8ZNN5
contig_1	Pyrodigal	gene	2141877	2143910	.	+	.	ID=GCA000010485_02123_gene;locus_tag=GCA000010485_02123;gene=metG
contig_1	Pyrodigal	CDS	2141877	2143910	.	+	0	ID=GCA000010485_02123;Name=methionine--tRNA ligase;locus_tag=GCA000010485_02123;product=methionine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004825,GO:0005524,GO:0005829,GO:0006431,GO:0046872;gene=metG;Parent=GCA000010485_02123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0143,COG:J,RefSeq:WP_001296226.1,SO:0001217,UniParc:UPI000188767C,UniRef:UniRef100_B7MX36,UniRef:UniRef50_P00959,UniRef:UniRef90_P00959;ec_number=6.1.1.10
contig_1	Pyrodigal	gene	2144051	2147851	.	+	.	ID=GCA000010485_02124_gene;locus_tag=GCA000010485_02124
contig_1	Pyrodigal	CDS	2144051	2147851	.	+	0	ID=GCA000010485_02124;Name=DUF4132 domain-containing protein;locus_tag=GCA000010485_02124;product=DUF4132 domain-containing protein;Parent=GCA000010485_02124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001215663.1,SO:0001217,UniParc:UPI0001C22B57,UniRef:UniRef100_A0A641E5B0,UniRef:UniRef50_A0AAN3RXD7,UniRef:UniRef90_A0A641E5B0
contig_1	Pyrodigal	gene	2147864	2151625	.	+	.	ID=GCA000010485_02125_gene;locus_tag=GCA000010485_02125
contig_1	Pyrodigal	CDS	2147864	2151625	.	+	0	ID=GCA000010485_02125;Name=DUF4132 domain-containing protein;locus_tag=GCA000010485_02125;product=DUF4132 domain-containing protein;Parent=GCA000010485_02125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000860751.1,SO:0001217,UniParc:UPI0001C22B58,UniRef:UniRef100_A0A061YF29,UniRef:UniRef50_P33345,UniRef:UniRef90_A0A061YF29
contig_1	Pyrodigal	gene	2151635	2155267	.	+	.	ID=GCA000010485_02126_gene;locus_tag=GCA000010485_02126;gene=yehI
contig_1	Pyrodigal	CDS	2151635	2155267	.	+	0	ID=GCA000010485_02126;Name=putative protein YehI;locus_tag=GCA000010485_02126;product=putative protein YehI;gene=yehI;Parent=GCA000010485_02126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356760.1,SO:0001217,UniParc:UPI0001C22B59,UniRef:UniRef100_A0A061L5H4,UniRef:UniRef50_P33346,UniRef:UniRef90_P33346
contig_1	Pyrodigal	gene	2155328	2155513	.	+	.	ID=GCA000010485_02127_gene;locus_tag=GCA000010485_02127;gene=yehK
contig_1	Pyrodigal	CDS	2155328	2155513	.	+	0	ID=GCA000010485_02127;Name=YehK protein;locus_tag=GCA000010485_02127;product=YehK protein;gene=yehK;Parent=GCA000010485_02127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000DED8B,UniRef:UniRef100_A0A0D6IWL6,UniRef:UniRef50_A0A4C7B413,UniRef:UniRef90_A0A0D6IWL6
contig_1	Bakta	gene	2155826	2155915	.	-	.	ID=GCA000010485_02128_gene;locus_tag=GCA000010485_02128;inference=ab initio prediction:Bakta;gene=zorO
contig_1	Bakta	CDS	2155826	2155915	.	-	0	ID=GCA000010485_02128;Name=Small toxic protein ZorO;locus_tag=GCA000010485_02128;product=Small toxic protein ZorO;Dbxref=GO:0005886;gene=zorO;Parent=GCA000010485_02128_gene;Note=SO:0001217,UniParc:UPI00000D0EB1,UniRef:UniRef100_Q8X3T7,UniRef:UniRef50_Q8X3T7,UniRef:UniRef90_Q8X3T7
contig_1	Infernal	gene	2156159	2156234	.	+	.	ID=GCA000010485_02129_gene;locus_tag=GCA000010485_02129;gene=OrzO-P
contig_1	Infernal	ncRNA	2156159	2156234	1.9e-17	+	.	ID=GCA000010485_02129;Name=OrzO-P RNA antitoxin family;locus_tag=GCA000010485_02129;product=OrzO-P RNA antitoxin family;Dbxref=RFAM:RF02083;Parent=GCA000010485_02129_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02083
contig_1	Pyrodigal	gene	2156346	2157434	.	+	.	ID=GCA000010485_02130_gene;locus_tag=GCA000010485_02130;gene=yehL
contig_1	Pyrodigal	CDS	2156346	2157434	.	+	0	ID=GCA000010485_02130;Name=putative protein YehL;locus_tag=GCA000010485_02130;product=putative protein YehL;Dbxref=GO:0005524,GO:0016887;gene=yehL;Parent=GCA000010485_02130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296229.1,SO:0001217,UniParc:UPI0002185984,UniRef:UniRef100_A0A061L3S2,UniRef:UniRef50_P33348,UniRef:UniRef90_P33348
contig_1	Pyrodigal	gene	2157445	2159724	.	+	.	ID=GCA000010485_02131_gene;locus_tag=GCA000010485_02131;gene=yehM
contig_1	Pyrodigal	CDS	2157445	2159724	.	+	0	ID=GCA000010485_02131;Name=YehM protein;locus_tag=GCA000010485_02131;product=YehM protein;gene=yehM;Parent=GCA000010485_02131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001294398.1,SO:0001217,UniParc:UPI0001C22B5B,UniRef:UniRef100_A0A061L314,UniRef:UniRef50_P33349,UniRef:UniRef90_A0A0H3EKT8
contig_1	Pyrodigal	gene	2159717	2160667	.	+	.	ID=GCA000010485_02132_gene;locus_tag=GCA000010485_02132
contig_1	Pyrodigal	CDS	2159717	2160667	.	+	0	ID=GCA000010485_02132;Name=VWA domain-containing protein;locus_tag=GCA000010485_02132;product=VWA domain-containing protein;Parent=GCA000010485_02132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A485JCA9,UniRef:UniRef90_UPI002FDF5132
contig_1	Pyrodigal	gene	2160849	2162852	.	+	.	ID=GCA000010485_02133_gene;locus_tag=GCA000010485_02133;gene=yehQ
contig_1	Pyrodigal	CDS	2160849	2162852	.	+	0	ID=GCA000010485_02133;Name=Protein YehQ;locus_tag=GCA000010485_02133;product=Protein YehQ;Dbxref=GO:0005829,GO:0008270;gene=yehQ;Parent=GCA000010485_02133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296230.1,SO:0001217,UniParc:UPI0001C22B5D,UniRef:UniRef100_A0A061L876,UniRef:UniRef50_P33353,UniRef:UniRef90_P33353
contig_1	Pyrodigal	gene	2162977	2163438	.	+	.	ID=GCA000010485_02134_gene;locus_tag=GCA000010485_02134;gene=yehR
contig_1	Pyrodigal	CDS	2162977	2163438	.	+	0	ID=GCA000010485_02134;Name=putative lipoprotein YehR;locus_tag=GCA000010485_02134;product=putative lipoprotein YehR;Dbxref=GO:0005886;gene=yehR;Parent=GCA000010485_02134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4808,COG:S,RefSeq:WP_001296231.1,SO:0001217,UniParc:UPI0000DACEF7,UniRef:UniRef100_E2QNZ0,UniRef:UniRef50_P33354,UniRef:UniRef90_P33354
contig_1	Pyrodigal	gene	2163479	2163949	.	-	.	ID=GCA000010485_02135_gene;locus_tag=GCA000010485_02135;gene=yehS
contig_1	Pyrodigal	CDS	2163479	2163949	.	-	0	ID=GCA000010485_02135;Name=putative protein YehS;locus_tag=GCA000010485_02135;product=putative protein YehS;gene=yehS;Parent=GCA000010485_02135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4807,COG:S,RefSeq:WP_001295430.1,SO:0001217,UniParc:UPI00000D00A8,UniRef:UniRef100_C3T4D2,UniRef:UniRef50_P33355,UniRef:UniRef90_P33355
contig_1	Pyrodigal	gene	2163996	2164715	.	-	.	ID=GCA000010485_02136_gene;locus_tag=GCA000010485_02136;gene=btsR
contig_1	Pyrodigal	CDS	2163996	2164715	.	-	0	ID=GCA000010485_02136;Name=two-component system response regulator BtsR;locus_tag=GCA000010485_02136;product=two-component system response regulator BtsR;Dbxref=GO:0000156,GO:0003677;gene=btsR;Parent=GCA000010485_02136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,KEGG:K27883,RefSeq:WP_000598641.1,SO:0001217,UniParc:UPI000013AC52,UniRef:UniRef100_P0AFT5,UniRef:UniRef50_P0AFT5,UniRef:UniRef90_P0AFT5
contig_1	Pyrodigal	gene	2164712	2166397	.	-	.	ID=GCA000010485_02137_gene;locus_tag=GCA000010485_02137;gene=btsS
contig_1	Pyrodigal	CDS	2164712	2166397	.	-	0	ID=GCA000010485_02137;Name=two-component regulatory system sensor histidine kinase BtsS;locus_tag=GCA000010485_02137;product=two-component regulatory system sensor histidine kinase BtsS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0071555;gene=btsS;Parent=GCA000010485_02137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295431,COG:COG3275,COG:T,RefSeq:WP_001295431.1,SO:0001217,UniParc:UPI000013AC53,UniRef:UniRef100_P0AD14,UniRef:UniRef50_P0AD14,UniRef:UniRef90_P0AD14;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2166619	2167350	.	+	.	ID=GCA000010485_02138_gene;locus_tag=GCA000010485_02138;gene=mlrA
contig_1	Pyrodigal	CDS	2166619	2167350	.	+	0	ID=GCA000010485_02138;Name=HTH-type transcriptional regulator MlrA;locus_tag=GCA000010485_02138;product=HTH-type transcriptional regulator MlrA;Dbxref=GO:0003677,GO:0003700;gene=mlrA;Parent=GCA000010485_02138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,KEGG:K21089,RefSeq:WP_001240408.1,SO:0001217,UniParc:UPI0001C22B5E,UniRef:UniRef100_A0A066T454,UniRef:UniRef50_P33358,UniRef:UniRef90_P33358
contig_1	Pyrodigal	gene	2167410	2167517	.	+	.	ID=GCA000010485_02139_gene;locus_tag=GCA000010485_02139;gene=yohO
contig_1	Pyrodigal	CDS	2167410	2167517	.	+	0	ID=GCA000010485_02139;Name=protein YohO;locus_tag=GCA000010485_02139;product=protein YohO;Dbxref=GO:0005886;gene=yohO;Parent=GCA000010485_02139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001216963.1,SO:0001217,UniParc:UPI000018F93A,UniRef:UniRef100_Q2EES6,UniRef:UniRef50_Q2EES6,UniRef:UniRef90_Q2EES6
contig_1	Pyrodigal	gene	2167498	2168229	.	-	.	ID=GCA000010485_02140_gene;locus_tag=GCA000010485_02140;gene=yehW
contig_1	Pyrodigal	CDS	2167498	2168229	.	-	0	ID=GCA000010485_02140;Name=glycine betaine ABC transporter permease YehW;locus_tag=GCA000010485_02140;product=glycine betaine ABC transporter permease YehW;Dbxref=GO:0005886,GO:0006865,GO:0015838,GO:0016020,GO:0031460,GO:0055052,GO:0055085;gene=yehW;Parent=GCA000010485_02140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000783123,COG:COG1174,COG:E,RefSeq:WP_000783109.1,SO:0001217,UniParc:UPI0001C22B5F,UniRef:UniRef100_A0A061YF21,UniRef:UniRef50_P33359,UniRef:UniRef90_P33359
contig_1	Pyrodigal	gene	2168234	2169160	.	-	.	ID=GCA000010485_02141_gene;locus_tag=GCA000010485_02141;gene=yehX
contig_1	Pyrodigal	CDS	2168234	2169160	.	-	0	ID=GCA000010485_02141;Name=glycine betaine ABC transporter ATP binding protein YehX;locus_tag=GCA000010485_02141;product=glycine betaine ABC transporter ATP binding protein YehX;gene=yehX;Parent=GCA000010485_02141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000569315,RefSeq:WP_000569347.1,SO:0001217,UniParc:UPI0001C22B60,UniRef:UniRef100_A0A061YG65,UniRef:UniRef50_P33360,UniRef:UniRef90_A0A244BP41
contig_1	Pyrodigal	gene	2169153	2170310	.	-	.	ID=GCA000010485_02142_gene;locus_tag=GCA000010485_02142;gene=yehY
contig_1	Pyrodigal	CDS	2169153	2170310	.	-	0	ID=GCA000010485_02142;Name=glycine betaine ABC transporter permease YehY;locus_tag=GCA000010485_02142;product=glycine betaine ABC transporter permease YehY;Dbxref=GO:0005886,GO:0006865,GO:0015838,GO:0016020,GO:0031460,GO:0055052,GO:0055085;gene=yehY;Parent=GCA000010485_02142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000220837,RefSeq:WP_000221815.1,SO:0001217,UniParc:UPI0001C22B61,UniRef:UniRef100_A0A066T0C1,UniRef:UniRef50_P33361,UniRef:UniRef90_P33361
contig_1	Pyrodigal	gene	2170317	2171234	.	-	.	ID=GCA000010485_02143_gene;locus_tag=GCA000010485_02143;gene=osmF
contig_1	Pyrodigal	CDS	2170317	2171234	.	-	0	ID=GCA000010485_02143;Name=glycine betaine ABC transporter substrate-binding protein OsmF;locus_tag=GCA000010485_02143;product=glycine betaine ABC transporter substrate-binding protein OsmF;gene=osmF;Parent=GCA000010485_02143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001130308,COG:COG1732,COG:M,RefSeq:WP_001131267.1,SO:0001217,UniParc:UPI0001C22B62,UniRef:UniRef100_A0A061L7G7,UniRef:UniRef50_A0A083ZTU6,UniRef:UniRef90_Q1R9U2
contig_1	Pyrodigal	gene	2171424	2173691	.	-	.	ID=GCA000010485_02144_gene;locus_tag=GCA000010485_02144;gene=bglX
contig_1	Pyrodigal	CDS	2171424	2173691	.	-	0	ID=GCA000010485_02144;Name=beta-glucosidase BglX;locus_tag=GCA000010485_02144;product=beta-glucosidase BglX;Dbxref=GO:0004553,GO:0005975;gene=bglX;Parent=GCA000010485_02144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1472,COG:G,KEGG:K05349,SO:0001217,UniRef:UniRef50_P33363,UniRef:UniRef90_A0A7Z8Z913;ec_number=3.2.1.21
contig_1	Pyrodigal	gene	2173917	2175632	.	+	.	ID=GCA000010485_02145_gene;locus_tag=GCA000010485_02145;gene=dld
contig_1	Pyrodigal	CDS	2173917	2175632	.	+	0	ID=GCA000010485_02145;Name=D-lactate dehydrogenase;locus_tag=GCA000010485_02145;product=D-lactate dehydrogenase;Dbxref=GO:0005886,GO:0006089,GO:0009055,GO:0009060,GO:0009061,GO:0009898,GO:0016901,GO:0022904,GO:0031234,GO:0048038,GO:0050660,GO:0055085,GO:0071949,GO:0102029;gene=dld;Parent=GCA000010485_02145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0277,KEGG:K03777,RefSeq:WP_000097408.1,SO:0001217,UniParc:UPI0001C22B65,UniRef:UniRef100_UPI0001C22B65,UniRef:UniRef50_P06149,UniRef:UniRef90_P06149;ec_number=1.1.5.12
contig_1	Pyrodigal	gene	2175671	2176603	.	-	.	ID=GCA000010485_02146_gene;locus_tag=GCA000010485_02146;gene=pbpG
contig_1	Pyrodigal	CDS	2175671	2176603	.	-	0	ID=GCA000010485_02146;Name=D-alanyl-D-alanine endopeptidase;locus_tag=GCA000010485_02146;product=D-alanyl-D-alanine endopeptidase;Dbxref=GO:0006508,GO:0008360,GO:0009002,GO:0009252,GO:0042597,GO:0071555;gene=pbpG;Parent=GCA000010485_02146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,KEGG:K07262,RefSeq:WP_001319943.1,SO:0001217,UniParc:UPI00001639D5,UniRef:UniRef100_P0AFI5,UniRef:UniRef50_P0AFI5,UniRef:UniRef90_P0AFI5;ec_number=3.4.21.-
contig_1	Infernal	regulatory_region	2176608	2176688	5.1e-13	-	.	ID=EFPPCJGBKI_313;Name=Peptidase-S11 RNA;product=Peptidase-S11 RNA;Dbxref=RFAM:RF03039;inference=profile:Rfam:RF03039;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2176777	2177364	.	-	.	ID=GCA000010485_02147_gene;locus_tag=GCA000010485_02147;gene=yohC
contig_1	Pyrodigal	CDS	2176777	2177364	.	-	0	ID=GCA000010485_02147;Name=Inner membrane protein YohC;locus_tag=GCA000010485_02147;product=Inner membrane protein YohC;Dbxref=GO:0005886,GO:0006974;gene=yohC;Parent=GCA000010485_02147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295454.1,SO:0001217,UniParc:UPI000013BC7F,UniRef:UniRef100_P0AD17,UniRef:UniRef50_P0AD17,UniRef:UniRef90_P0AD17
contig_1	Pyrodigal	gene	2177534	2178112	.	+	.	ID=GCA000010485_02148_gene;locus_tag=GCA000010485_02148;gene=yohD
contig_1	Pyrodigal	CDS	2177534	2178112	.	+	0	ID=GCA000010485_02148;Name=Inner membrane protein YohD;locus_tag=GCA000010485_02148;product=Inner membrane protein YohD;Dbxref=GO:0005886,GO:0043093;gene=yohD;Parent=GCA000010485_02148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000365433.1,SO:0001217,UniParc:UPI00005F1990,UniRef:UniRef100_C3T470,UniRef:UniRef50_P33366,UniRef:UniRef90_P33366
contig_1	Pyrodigal	gene	2178242	2179003	.	-	.	ID=GCA000010485_02149_gene;locus_tag=GCA000010485_02149;gene=yohF
contig_1	Pyrodigal	CDS	2178242	2179003	.	-	0	ID=GCA000010485_02149;Name=SDR family oxidoreductase;locus_tag=GCA000010485_02149;product=SDR family oxidoreductase;Dbxref=GO:0016491;gene=yohF;Parent=GCA000010485_02149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000079537.1,SO:0001217,UniParc:UPI0001C22B66,UniRef:UniRef100_A0A192C9K8,UniRef:UniRef50_P33368,UniRef:UniRef90_P33368;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2179056	2180492	.	-	.	ID=GCA000010485_02150_gene;locus_tag=GCA000010485_02150;gene=mdtQ
contig_1	Pyrodigal	CDS	2179056	2180492	.	-	0	ID=GCA000010485_02150;Name=multidrug resistance outer membrane protein MdtQ;locus_tag=GCA000010485_02150;product=multidrug resistance outer membrane protein MdtQ;Dbxref=GO:0009279,GO:0015562,GO:0016020,GO:0046677,GO:0055085;gene=mdtQ;Parent=GCA000010485_02150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001078132.1,SO:0001217,UniParc:UPI0001C22B67,UniRef:UniRef100_A0A061YF14,UniRef:UniRef50_P33369,UniRef:UniRef90_P33369
contig_1	Bakta	gene	2180716	2180799	.	+	.	ID=GCA000010485_02151_gene;locus_tag=GCA000010485_02151;inference=ab initio prediction:Bakta;gene=yohP
contig_1	Bakta	CDS	2180716	2180799	.	+	0	ID=GCA000010485_02151;Name=small membrane protein YohP;locus_tag=GCA000010485_02151;product=small membrane protein YohP;Dbxref=GO:0005886;gene=yohP;Parent=GCA000010485_02151_gene;Note=RefSeq:WP_000691708.1,SO:0001217,UniParc:UPI00016A018D,UniRef:UniRef100_C1P609,UniRef:UniRef50_C1P609,UniRef:UniRef90_C1P609
contig_1	Pyrodigal	gene	2181187	2182137	.	-	.	ID=GCA000010485_02152_gene;locus_tag=GCA000010485_02152;gene=dusC
contig_1	Pyrodigal	CDS	2181187	2182137	.	-	0	ID=GCA000010485_02152;Name=tRNA dihydrouridine(16) synthase DusC;locus_tag=GCA000010485_02152;product=tRNA dihydrouridine(16) synthase DusC;Dbxref=GO:0000049,GO:0002943,GO:0010181,GO:0017150,GO:0050660,GO:0102262;gene=dusC;Parent=GCA000010485_02152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05541,RefSeq:WP_001264872.1,SO:0001217,UniParc:UPI0000232C7A,UniRef:UniRef100_Q8FFV5,UniRef:UniRef50_P33371,UniRef:UniRef90_P33371;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	2182376	2182774	.	+	.	ID=GCA000010485_02153_gene;locus_tag=GCA000010485_02153;gene=yohJ
contig_1	Pyrodigal	CDS	2182376	2182774	.	+	0	ID=GCA000010485_02153;Name=UPF0299 membrane protein YohJ;locus_tag=GCA000010485_02153;product=UPF0299 membrane protein YohJ;Dbxref=GO:0005886;gene=yohJ;Parent=GCA000010485_02153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1380,COG:R,RefSeq:WP_001295452.1,SO:0001217,UniParc:UPI000013BC85,UniRef:UniRef100_P60632,UniRef:UniRef50_P60632,UniRef:UniRef90_P60632
contig_1	Pyrodigal	gene	2182771	2183466	.	+	.	ID=GCA000010485_02154_gene;locus_tag=GCA000010485_02154;gene=yohK
contig_1	Pyrodigal	CDS	2182771	2183466	.	+	0	ID=GCA000010485_02154;Name=CidB/LrgB family autolysis modulator;locus_tag=GCA000010485_02154;product=CidB/LrgB family autolysis modulator;Dbxref=GO:0005886;gene=yohK;Parent=GCA000010485_02154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_000968208.1,SO:0001217,UniParc:UPI000013BC87,UniRef:UniRef100_P0AD19,UniRef:UniRef50_P0AD19,UniRef:UniRef90_P0AD19
contig_1	Pyrodigal	gene	2183596	2184480	.	+	.	ID=GCA000010485_02155_gene;locus_tag=GCA000010485_02155;gene=cdd
contig_1	Pyrodigal	CDS	2183596	2184480	.	+	0	ID=GCA000010485_02155;Name=cytidine deaminase;locus_tag=GCA000010485_02155;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005829,GO:0008270,GO:0009972,GO:0042802;gene=cdd;Parent=GCA000010485_02155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,KEGG:K01489,RefSeq:WP_000553553.1,SO:0001217,UniParc:UPI00000DED9F,UniRef:UniRef100_B7UFF9,UniRef:UniRef50_P0ABF6,UniRef:UniRef90_P0ABF6;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	2184630	2185349	.	+	.	ID=GCA000010485_02156_gene;locus_tag=GCA000010485_02156;gene=sanA
contig_1	Pyrodigal	CDS	2184630	2185349	.	+	0	ID=GCA000010485_02156;Name=outer membrane permeability protein SanA;locus_tag=GCA000010485_02156;product=outer membrane permeability protein SanA;Dbxref=GO:0005886;gene=sanA;Parent=GCA000010485_02156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2949,COG:M,KEGG:K03748,RefSeq:WP_000920064.1,SO:0001217,UniParc:UPI000013553A,UniRef:UniRef100_P0AFY2,UniRef:UniRef50_P0AFY2,UniRef:UniRef90_P0AFY2
contig_1	Pyrodigal	gene	2185352	2185591	.	+	.	ID=GCA000010485_02157_gene;locus_tag=GCA000010485_02157;gene=yeiS
contig_1	Pyrodigal	CDS	2185352	2185591	.	+	0	ID=GCA000010485_02157;Name=putative protein YeiS;locus_tag=GCA000010485_02157;product=putative protein YeiS;Dbxref=GO:0016020;gene=yeiS;Parent=GCA000010485_02157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000383096.1,SO:0001217,UniParc:UPI000013AC6E,UniRef:UniRef100_P64536,UniRef:UniRef50_P64536,UniRef:UniRef90_P64536
contig_1	Pyrodigal	gene	2185785	2187023	.	+	.	ID=GCA000010485_02158_gene;locus_tag=GCA000010485_02158;gene=preT
contig_1	Pyrodigal	CDS	2185785	2187023	.	+	0	ID=GCA000010485_02158;Name=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;locus_tag=GCA000010485_02158;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;Dbxref=GO:0003954,GO:0004159,GO:0006208,GO:0006210,GO:0006212,GO:0016491,GO:0051536,GO:0140690,GO:1990204;gene=preT;Parent=GCA000010485_02158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001136389,RefSeq:WP_001136339.1,SO:0001217,UniParc:UPI0001C22B68,UniRef:UniRef100_A0A066T035,UniRef:UniRef50_P76440,UniRef:UniRef90_P76440;ec_number=1.3.1.1
contig_1	Pyrodigal	gene	2187017	2188252	.	+	.	ID=GCA000010485_02159_gene;locus_tag=GCA000010485_02159;gene=preA
contig_1	Pyrodigal	CDS	2187017	2188252	.	+	0	ID=GCA000010485_02159;Name=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;locus_tag=GCA000010485_02159;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;Dbxref=GO:0006210,GO:0006212,GO:0017113;gene=preA;Parent=GCA000010485_02159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956074.1,SO:0001217,UniParc:UPI0001C22B69,UniRef:UniRef100_A0A066T470,UniRef:UniRef50_Q8ZNL7,UniRef:UniRef90_A0A377CCD1;ec_number=1.3.1.1
contig_1	Infernal	gene	2188355	2188432	.	-	.	ID=GCA000010485_02160_gene;locus_tag=GCA000010485_02160;gene=naRNA4
contig_1	Infernal	ncRNA	2188355	2188432	2.1e-13	-	.	ID=GCA000010485_02160;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02160;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02160_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2188495	2189505	.	-	.	ID=GCA000010485_02161_gene;locus_tag=GCA000010485_02161;gene=mglC
contig_1	Pyrodigal	CDS	2188495	2189505	.	-	0	ID=GCA000010485_02161;Name=galactose/methyl galactoside ABC transporter permease MglC;locus_tag=GCA000010485_02161;product=galactose/methyl galactoside ABC transporter permease MglC;Dbxref=GO:0005886,GO:0008643,GO:0016020,GO:0022857,GO:0055085;gene=mglC;Parent=GCA000010485_02161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4211,COG:G,KEGG:K10541,RefSeq:WP_001275112.1,SO:0001217,UniParc:UPI00000DEDA4,UniRef:UniRef100_E2QP14,UniRef:UniRef50_P23200,UniRef:UniRef90_P23200
contig_1	Pyrodigal	gene	2189521	2191041	.	-	.	ID=GCA000010485_02162_gene;locus_tag=GCA000010485_02162;gene=mglA
contig_1	Pyrodigal	CDS	2189521	2191041	.	-	0	ID=GCA000010485_02162;Name=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;locus_tag=GCA000010485_02162;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;Dbxref=GO:0005524,GO:0005886,GO:0008643,GO:0016020,GO:0016887,GO:0043211;gene=mglA;Parent=GCA000010485_02162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,KEGG:K10542,RefSeq:WP_000255034.1,SO:0001217,UniParc:UPI00000DEDA5,UniRef:UniRef100_Q8FFU7,UniRef:UniRef50_P0AAG8,UniRef:UniRef90_P0AAG8;ec_number=7.5.2.11
contig_1	Pyrodigal	gene	2191102	2192100	.	-	.	ID=GCA000010485_02163_gene;locus_tag=GCA000010485_02163;gene=mglB
contig_1	Pyrodigal	CDS	2191102	2192100	.	-	0	ID=GCA000010485_02163;Name=galactose/glucose ABC transporter substrate-binding protein MglB;locus_tag=GCA000010485_02163;product=galactose/glucose ABC transporter substrate-binding protein MglB;Dbxref=GO:0006935,GO:0030246,GO:0030288,GO:0046872;gene=mglB;Parent=GCA000010485_02163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_001036964.1,SO:0001217,UniParc:UPI00000480DB,UniRef:UniRef100_P0AEE5,UniRef:UniRef50_P0AEE5,UniRef:UniRef90_P0AEE5
contig_1	Pyrodigal	gene	2192380	2193420	.	-	.	ID=GCA000010485_02164_gene;locus_tag=GCA000010485_02164;gene=galS
contig_1	Pyrodigal	CDS	2192380	2193420	.	-	0	ID=GCA000010485_02164;Name=HTH-type transcriptional regulator GalS;locus_tag=GCA000010485_02164;product=HTH-type transcriptional regulator GalS;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355;gene=galS;Parent=GCA000010485_02164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000628655.1,SO:0001217,UniParc:UPI00005EF3F9,UniRef:UniRef100_E2QP17,UniRef:UniRef50_P25748,UniRef:UniRef90_P25748
contig_1	Pyrodigal	gene	2193562	2194719	.	-	.	ID=GCA000010485_02165_gene;locus_tag=GCA000010485_02165;gene=yeiB
contig_1	Pyrodigal	CDS	2193562	2194719	.	-	0	ID=GCA000010485_02165;Name=DUF418 domain-containing protein;locus_tag=GCA000010485_02165;product=DUF418 domain-containing protein;Dbxref=GO:0005886;gene=yeiB;Parent=GCA000010485_02165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07148,RefSeq:WP_000440900.1,SO:0001217,UniParc:UPI0001C22B6A,UniRef:UniRef100_A0A066T8C8,UniRef:UniRef50_P25747,UniRef:UniRef90_P25747
contig_1	Pyrodigal	gene	2194736	2195404	.	-	.	ID=GCA000010485_02166_gene;locus_tag=GCA000010485_02166;gene=folE
contig_1	Pyrodigal	CDS	2194736	2195404	.	-	0	ID=GCA000010485_02166;Name=GTP cyclohydrolase I FolE;locus_tag=GCA000010485_02166;product=GTP cyclohydrolase I FolE;Dbxref=GO:0003934,GO:0005525,GO:0005737,GO:0006729,GO:0006730,GO:0008270,GO:0046654;gene=folE;Parent=GCA000010485_02166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0302,COG:H,RefSeq:WP_001139613.1,SO:0001217,UniParc:UPI00001639D8,UniRef:UniRef100_P0A6T5,UniRef:UniRef50_P0A6T5,UniRef:UniRef90_P0A6T5;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	2195662	2196498	.	+	.	ID=GCA000010485_02167_gene;locus_tag=GCA000010485_02167;gene=yeiG
contig_1	Pyrodigal	CDS	2195662	2196498	.	+	0	ID=GCA000010485_02167;Name=S-formylglutathione hydrolase;locus_tag=GCA000010485_02167;product=S-formylglutathione hydrolase;Dbxref=GO:0005829,GO:0018738,GO:0046294,GO:0052689;gene=yeiG;Parent=GCA000010485_02167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000425438,COG:COG0627,COG:V,KEGG:K01070,RefSeq:WP_000425449.1,SO:0001217,UniParc:UPI0001C22B6B,UniRef:UniRef100_UPI0001C22B6B,UniRef:UniRef50_P33018,UniRef:UniRef90_P33018;ec_number=3.1.2.12
contig_1	Pyrodigal	gene	2196530	2198521	.	-	.	ID=GCA000010485_02168_gene;locus_tag=GCA000010485_02168;gene=cirA
contig_1	Pyrodigal	CDS	2196530	2198521	.	-	0	ID=GCA000010485_02168;Name=catecholate siderophore receptor CirA;locus_tag=GCA000010485_02168;product=catecholate siderophore receptor CirA;Dbxref=GO:0006879,GO:0009279,GO:0015343,GO:0015344,GO:0016020,GO:0042912,GO:0044718,GO:1902495;gene=cirA;Parent=GCA000010485_02168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000489277.1,SO:0001217,UniParc:UPI00018865D4,UniRef:UniRef100_E2QP21,UniRef:UniRef50_P17315,UniRef:UniRef90_P17315
contig_1	Pyrodigal	gene	2198813	2200282	.	-	.	ID=GCA000010485_02169_gene;locus_tag=GCA000010485_02169;gene=lysP
contig_1	Pyrodigal	CDS	2198813	2200282	.	-	0	ID=GCA000010485_02169;Name=lysine-specific permease;locus_tag=GCA000010485_02169;product=lysine-specific permease;Dbxref=GO:0003333,GO:0005886,GO:0015171,GO:0015189,GO:0016020,GO:0042802,GO:0043200,GO:0097639;gene=lysP;Parent=GCA000010485_02169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000253273,COG:COG0833,COG:E,KEGG:K11733,RefSeq:WP_000534384.1,SO:0001217,UniParc:UPI000000E3A7,UniRef:UniRef100_E2QP22,UniRef:UniRef50_P25737,UniRef:UniRef90_P25737
contig_1	Pyrodigal	gene	2200487	2201368	.	-	.	ID=GCA000010485_02170_gene;locus_tag=GCA000010485_02170;gene=yeiE
contig_1	Pyrodigal	CDS	2200487	2201368	.	-	0	ID=GCA000010485_02170;Name=DNA-binding transcriptional regulator YeiE;locus_tag=GCA000010485_02170;product=DNA-binding transcriptional regulator YeiE;Dbxref=GO:0000976,GO:0003700,GO:0006351,GO:0006355;gene=yeiE;Parent=GCA000010485_02170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000548294.1,SO:0001217,UniParc:UPI000013AC61,UniRef:UniRef100_P0ACR4,UniRef:UniRef50_P0ACR4,UniRef:UniRef90_P0ACR4
contig_1	Pyrodigal	gene	2201467	2202516	.	+	.	ID=GCA000010485_02171_gene;locus_tag=GCA000010485_02171;gene=yeiH
contig_1	Pyrodigal	CDS	2201467	2202516	.	+	0	ID=GCA000010485_02171;Name=UPF0324 membrane protein YeiH;locus_tag=GCA000010485_02171;product=UPF0324 membrane protein YeiH;Dbxref=GO:0005886;gene=yeiH;Parent=GCA000010485_02171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,RefSeq:WP_000182056.1,SO:0001217,UniParc:UPI00000DEDAA,UniRef:UniRef100_Q8FFU1,UniRef:UniRef50_P62723,UniRef:UniRef90_P62723
contig_1	Pyrodigal	gene	2202590	2203447	.	+	.	ID=GCA000010485_02172_gene;locus_tag=GCA000010485_02172;gene=nfo
contig_1	Pyrodigal	CDS	2202590	2203447	.	+	0	ID=GCA000010485_02172;Name=deoxyribonuclease IV;locus_tag=GCA000010485_02172;product=deoxyribonuclease IV;Dbxref=GO:0003677,GO:0003906,GO:0006281,GO:0006284,GO:0008081,GO:0008270,GO:0008833;gene=nfo;Parent=GCA000010485_02172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0648,COG:L,RefSeq:WP_000873880.1,SO:0001217,UniParc:UPI00000DEDAB,UniRef:UniRef100_B7UFH5,UniRef:UniRef50_P0A6C1,UniRef:UniRef90_P0A6C1;ec_number=3.1.21.2
contig_1	Pyrodigal	gene	2203451	2204539	.	+	.	ID=GCA000010485_02173_gene;locus_tag=GCA000010485_02173
contig_1	Pyrodigal	CDS	2203451	2204539	.	+	0	ID=GCA000010485_02173;Name=sugar kinase;locus_tag=GCA000010485_02173;product=sugar kinase;Parent=GCA000010485_02173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16328,RefSeq:WP_000999817.1,SO:0001217,UniParc:UPI00000DEDAC,UniRef:UniRef100_E2QP26,UniRef:UniRef50_P33020,UniRef:UniRef90_A0A377CC69;ec_number=2.7.1.83
contig_1	Pyrodigal	gene	2204807	2205748	.	-	.	ID=GCA000010485_02174_gene;locus_tag=GCA000010485_02174;gene=rihB
contig_1	Pyrodigal	CDS	2204807	2205748	.	-	0	ID=GCA000010485_02174;Name=ribosylpyrimidine nucleosidase;locus_tag=GCA000010485_02174;product=ribosylpyrimidine nucleosidase;Dbxref=GO:0005509,GO:0005829,GO:0006152,GO:0006206,GO:0008477,GO:0045437,GO:0046133;gene=rihB;Parent=GCA000010485_02174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,KEGG:K10213,RefSeq:WP_000415422.1,SO:0001217,UniParc:UPI00000DEDAD,UniRef:UniRef100_B7UFH8,UniRef:UniRef50_P33022,UniRef:UniRef90_P33022;ec_number=3.2.2.8
contig_1	Pyrodigal	gene	2205878	2206576	.	+	.	ID=GCA000010485_02175_gene;locus_tag=GCA000010485_02175;gene=yeiL
contig_1	Pyrodigal	CDS	2205878	2206576	.	+	0	ID=GCA000010485_02175;Name=Regulatory protein YeiL;locus_tag=GCA000010485_02175;product=Regulatory protein YeiL;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006351,GO:0046872,GO:0051539;gene=yeiL;Parent=GCA000010485_02175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,KEGG:K16326,RefSeq:WP_000658608.1,SO:0001217,UniParc:UPI00000DEDAE,UniRef:UniRef100_A0A067HQ70,UniRef:UniRef50_P0A9E9,UniRef:UniRef90_P0A9E9
contig_1	Pyrodigal	gene	2206643	2207893	.	-	.	ID=GCA000010485_02176_gene;locus_tag=GCA000010485_02176;gene=psuT
contig_1	Pyrodigal	CDS	2206643	2207893	.	-	0	ID=GCA000010485_02176;Name=Putative pseudouridine transporter;locus_tag=GCA000010485_02176;product=Putative pseudouridine transporter;Dbxref=GO:0005337,GO:0005886,GO:0015293,GO:1901642;gene=psuT;Parent=GCA000010485_02176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16324,RefSeq:WP_000353897.1,SO:0001217,UniParc:UPI00000DEDAF,UniRef:UniRef100_A0A061YD20,UniRef:UniRef50_P33024,UniRef:UniRef90_P33024
contig_1	Pyrodigal	gene	2207987	2208925	.	-	.	ID=GCA000010485_02177_gene;locus_tag=GCA000010485_02177;gene=psuG
contig_1	Pyrodigal	CDS	2207987	2208925	.	-	0	ID=GCA000010485_02177;Name=pseudouridine-5'-phosphate glycosidase;locus_tag=GCA000010485_02177;product=pseudouridine-5'-phosphate glycosidase;Dbxref=GO:0004730,GO:0005737,GO:0016798,GO:0030145,GO:0032991,GO:0042802,GO:0046113;gene=psuG;Parent=GCA000010485_02177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001292460,COG:COG2313,COG:F,RefSeq:WP_001293146.1,SO:0001217,UniParc:UPI0001887781,UniRef:UniRef100_A0A066T051,UniRef:UniRef50_P33025,UniRef:UniRef90_P33025;ec_number=4.2.1.70
contig_1	Pyrodigal	gene	2208913	2209854	.	-	.	ID=GCA000010485_02178_gene;locus_tag=GCA000010485_02178
contig_1	Pyrodigal	CDS	2208913	2209854	.	-	0	ID=GCA000010485_02178;Name=pseudouridine kinase;locus_tag=GCA000010485_02178;product=pseudouridine kinase;Parent=GCA000010485_02178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16328,RefSeq:WP_001207098.1,SO:0001217,UniParc:UPI000187BB41,UniRef:UniRef100_E2QP31,UniRef:UniRef50_P30235,UniRef:UniRef90_E2QP31;ec_number=2.7.1.83
contig_1	Pyrodigal	gene	2210310	2212001	.	-	.	ID=GCA000010485_02179_gene;locus_tag=GCA000010485_02179;gene=fruA
contig_1	Pyrodigal	CDS	2210310	2212001	.	-	0	ID=GCA000010485_02179;Name=PTS fructose transporter subunit IIBC;locus_tag=GCA000010485_02179;product=PTS fructose transporter subunit IIBC;Dbxref=GO:0005351,GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0022877,GO:0090563,GO:0090582,GO:1902495,GO:1990539;gene=fruA;Parent=GCA000010485_02179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3925,COG:GT,RefSeq:WP_000854422.1,SO:0001217,UniParc:UPI0001C22B6D,UniRef:UniRef100_A0A066T8E3,UniRef:UniRef50_P20966,UniRef:UniRef90_P20966;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2212018	2212956	.	-	.	ID=GCA000010485_02180_gene;locus_tag=GCA000010485_02180;gene=fruB
contig_1	Pyrodigal	CDS	2212018	2212956	.	-	0	ID=GCA000010485_02180;Name=fused PTS fructose transporter subunit IIA/HPr protein;locus_tag=GCA000010485_02180;product=fused PTS fructose transporter subunit IIA/HPr protein;Dbxref=GO:0005524,GO:0005829,GO:0008662;gene=fruB;Parent=GCA000010485_02180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_000091263.1,SO:0001217,UniParc:UPI000012DAFF,UniRef:UniRef100_P0AEW9,UniRef:UniRef50_P0AEW9,UniRef:UniRef90_P0AEW9;ec_number=2.7.1.56
contig_1	Pyrodigal	gene	2212956	2214086	.	-	.	ID=GCA000010485_02181_gene;locus_tag=GCA000010485_02181;gene=fruB
contig_1	Pyrodigal	CDS	2212956	2214086	.	-	0	ID=GCA000010485_02181;Name=fused PTS fructose transporter subunit IIA/HPr protein;locus_tag=GCA000010485_02181;product=fused PTS fructose transporter subunit IIA/HPr protein;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0090563;gene=fruB;Parent=GCA000010485_02181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000487246,COG:COG4668,COG:G,RefSeq:WP_000487246.1,SO:0001217,UniParc:UPI00001328C9,UniRef:UniRef100_P69811,UniRef:UniRef50_P69811,UniRef:UniRef90_P69811;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2214454	2215635	.	+	.	ID=GCA000010485_02182_gene;locus_tag=GCA000010485_02182;gene=setB
contig_1	Pyrodigal	CDS	2214454	2215635	.	+	0	ID=GCA000010485_02182;Name=sugar efflux transporter SetB;locus_tag=GCA000010485_02182;product=sugar efflux transporter SetB;Dbxref=GO:0005351,GO:0005886,GO:0007059,GO:0008643,GO:0015767,GO:0016020,GO:0022857,GO:0034219,GO:0036448,GO:0055085,GO:1904659;gene=setB;Parent=GCA000010485_02182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000552003.1,SO:0001217,UniParc:UPI0001C22B6E,UniRef:UniRef100_A0A061L5C6,UniRef:UniRef50_P33026,UniRef:UniRef90_P33026
contig_1	Pyrodigal	gene	2215632	2215886	.	-	.	ID=GCA000010485_02183_gene;locus_tag=GCA000010485_02183;gene=ykgJ
contig_1	Pyrodigal	CDS	2215632	2215886	.	-	0	ID=GCA000010485_02183;Name=YkgJ family cysteine cluster protein;locus_tag=GCA000010485_02183;product=YkgJ family cysteine cluster protein;gene=ykgJ;Parent=GCA000010485_02183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296237.1,SO:0001217,UniParc:UPI0001C22B6F,UniRef:UniRef100_A0A061L3M2,UniRef:UniRef50_A0A2K4X8F0,UniRef:UniRef90_A0AAE9PSC1
contig_1	Pyrodigal	gene	2216041	2216613	.	+	.	ID=GCA000010485_02184_gene;locus_tag=GCA000010485_02184;gene=yeiP
contig_1	Pyrodigal	CDS	2216041	2216613	.	+	0	ID=GCA000010485_02184;Name=elongation factor P-like protein YeiP;locus_tag=GCA000010485_02184;product=elongation factor P-like protein YeiP;Dbxref=GO:0003746,GO:0005829,GO:0006414,GO:0043043;gene=yeiP;Parent=GCA000010485_02184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_001136827.1,SO:0001217,UniParc:UPI000013AC6B,UniRef:UniRef100_P0A6N8,UniRef:UniRef50_P0A6N8,UniRef:UniRef90_P0A6N8
contig_1	Pyrodigal	gene	2216836	2218302	.	+	.	ID=GCA000010485_02185_gene;locus_tag=GCA000010485_02185;gene=yeiQ
contig_1	Pyrodigal	CDS	2216836	2218302	.	+	0	ID=GCA000010485_02185;Name=putative oxidoreductase YeiQ;locus_tag=GCA000010485_02185;product=putative oxidoreductase YeiQ;Dbxref=GO:0016616,GO:0019594;gene=yeiQ;Parent=GCA000010485_02185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0246,COG:G,RefSeq:WP_001296238.1,SO:0001217,UniParc:UPI0001C22B71,UniRef:UniRef100_A0A066T060,UniRef:UniRef50_P39160,UniRef:UniRef90_P33029;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2218420	2219406	.	+	.	ID=GCA000010485_02186_gene;locus_tag=GCA000010485_02186;gene=yeiR
contig_1	Pyrodigal	CDS	2218420	2219406	.	+	0	ID=GCA000010485_02186;Name=zinc-binding GTPase YeiR;locus_tag=GCA000010485_02186;product=zinc-binding GTPase YeiR;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0008270,GO:1990606;gene=yeiR;Parent=GCA000010485_02186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000198828,COG:COG0523,COG:R,RefSeq:WP_000198798.1,SO:0001217,UniParc:UPI000187BB45,UniRef:UniRef100_A0A066T494,UniRef:UniRef50_P33030,UniRef:UniRef90_P33030;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2219445	2220158	.	+	.	ID=GCA000010485_02187_gene;locus_tag=GCA000010485_02187;gene=lpxT
contig_1	Pyrodigal	CDS	2219445	2220158	.	+	0	ID=GCA000010485_02187;Name=Kdo(2)-lipid A phosphotransferase;locus_tag=GCA000010485_02187;product=Kdo(2)-lipid A phosphotransferase;Dbxref=GO:0005886,GO:0009103,GO:0009245,GO:0016776,GO:0043165,GO:0050380,GO:1903412;gene=lpxT;Parent=GCA000010485_02187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594599,KEGG:K19803,RefSeq:WP_001296239.1,SO:0001217,UniParc:UPI000191E4C0,UniRef:UniRef100_E2QP40,UniRef:UniRef50_P76445,UniRef:UniRef90_P76445;ec_number=2.7.4.29
contig_1	Pyrodigal	gene	2220570	2221136	.	+	.	ID=GCA000010485_02188_gene;locus_tag=GCA000010485_02188;gene=mepS
contig_1	Pyrodigal	CDS	2220570	2221136	.	+	0	ID=GCA000010485_02188;Name=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;locus_tag=GCA000010485_02188;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;Dbxref=GO:0006508,GO:0008234,GO:0009279,GO:0045227,GO:0106415;gene=mepS;Parent=GCA000010485_02188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_000241011.1,SO:0001217,UniParc:UPI0000135E7F,UniRef:UniRef100_P0AFV4,UniRef:UniRef50_P0AFV4,UniRef:UniRef90_P0AFV4;ec_number=3.4.17.13
contig_1	Pyrodigal	gene	2221317	2222873	.	+	.	ID=GCA000010485_02189_gene;locus_tag=GCA000010485_02189;gene=pdeN
contig_1	Pyrodigal	CDS	2221317	2222873	.	+	0	ID=GCA000010485_02189;Name=cyclic di-GMP phosphodiesterase;locus_tag=GCA000010485_02189;product=cyclic di-GMP phosphodiesterase;Dbxref=GO:0005886,GO:0071111;gene=pdeN;Parent=GCA000010485_02189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2200,COG:T,KEGG:K26148,RefSeq:WP_000470587.1,SO:0001217,UniParc:UPI00005EF407,UniRef:UniRef100_E2QP42,UniRef:UniRef50_P76446,UniRef:UniRef90_P76446;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	2222955	2224769	.	+	.	ID=GCA000010485_02190_gene;locus_tag=GCA000010485_02190;gene=yejA
contig_1	Pyrodigal	CDS	2222955	2224769	.	+	0	ID=GCA000010485_02190;Name=putative protein YejA;locus_tag=GCA000010485_02190;product=putative protein YejA;Dbxref=GO:0006857,GO:0015421,GO:0015833,GO:0016020,GO:0030288,GO:0042884,GO:0055052,GO:1904680;gene=yejA;Parent=GCA000010485_02190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_001531831.1,SO:0001217,UniParc:UPI0001C22B72,UniRef:UniRef100_A0A641E779,UniRef:UniRef50_P33913,UniRef:UniRef90_P33913
contig_1	Pyrodigal	gene	2224770	2225864	.	+	.	ID=GCA000010485_02191_gene;locus_tag=GCA000010485_02191;gene=yejB
contig_1	Pyrodigal	CDS	2224770	2225864	.	+	0	ID=GCA000010485_02191;Name=Inner membrane ABC transporter permease protein YejB;locus_tag=GCA000010485_02191;product=Inner membrane ABC transporter permease protein YejB;Dbxref=GO:0005886,GO:0015833,GO:0016020,GO:0035672,GO:0042884,GO:0055052;gene=yejB;Parent=GCA000010485_02191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4174,COG:Q,KEGG:K13894,RefSeq:WP_000501604.1,SO:0001217,UniParc:UPI000013AC76,UniRef:UniRef100_P0AFU0,UniRef:UniRef50_P0AFU0,UniRef:UniRef90_P0AFU0
contig_1	Pyrodigal	gene	2225864	2226889	.	+	.	ID=GCA000010485_02192_gene;locus_tag=GCA000010485_02192;gene=yejE
contig_1	Pyrodigal	CDS	2225864	2226889	.	+	0	ID=GCA000010485_02192;Name=Inner membrane ABC transporter permease protein YejE;locus_tag=GCA000010485_02192;product=Inner membrane ABC transporter permease protein YejE;Dbxref=GO:0005886,GO:0015833,GO:0016020,GO:0035672,GO:0042884,GO:0055052;gene=yejE;Parent=GCA000010485_02192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4239,COG:Q,KEGG:K13895,RefSeq:WP_000088892.1,SO:0001217,UniParc:UPI00005EF409,UniRef:UniRef100_A0A061L5B7,UniRef:UniRef50_P33915,UniRef:UniRef90_P33915
contig_1	Pyrodigal	gene	2226891	2228480	.	+	.	ID=GCA000010485_02193_gene;locus_tag=GCA000010485_02193;gene=yejF
contig_1	Pyrodigal	CDS	2226891	2228480	.	+	0	ID=GCA000010485_02193;Name=microcin C ABC transporter ATP-binding protein YejF;locus_tag=GCA000010485_02193;product=microcin C ABC transporter ATP-binding protein YejF;Dbxref=GO:0000166,GO:0005524,GO:0005886,GO:0006810,GO:0015833,GO:0016020,GO:0016887,GO:0022857,GO:0035672,GO:0042626,GO:0042884,GO:0055052;gene=yejF;Parent=GCA000010485_02193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4172,COG:Q,RefSeq:WP_000194884.1,SO:0001217,UniParc:UPI0001C22B73,UniRef:UniRef100_A0A061YGJ7,UniRef:UniRef50_P33916,UniRef:UniRef90_P33916
contig_1	Pyrodigal	gene	2228484	2228828	.	-	.	ID=GCA000010485_02194_gene;locus_tag=GCA000010485_02194;gene=yejG
contig_1	Pyrodigal	CDS	2228484	2228828	.	-	0	ID=GCA000010485_02194;Name=putative protein YejG;locus_tag=GCA000010485_02194;product=putative protein YejG;gene=yejG;Parent=GCA000010485_02194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000202798.1,SO:0001217,UniParc:UPI000013AC79,UniRef:UniRef100_P0AD21,UniRef:UniRef50_P0AD21,UniRef:UniRef90_P0AD21
contig_1	Pyrodigal	gene	2229162	2230352	.	-	.	ID=GCA000010485_02195_gene;locus_tag=GCA000010485_02195;gene=bcr
contig_1	Pyrodigal	CDS	2229162	2230352	.	-	0	ID=GCA000010485_02195;Name=multidrug efflux MFS transporter Bcr;locus_tag=GCA000010485_02195;product=multidrug efflux MFS transporter Bcr;Dbxref=GO:0005886,GO:0015031,GO:0015385,GO:0016020,GO:0033228,GO:0033229,GO:0035442,GO:0042908,GO:0042910,GO:0046677,GO:0071916,GO:1990961;gene=bcr;Parent=GCA000010485_02195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000213361,COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_000213379.1,SO:0001217,UniParc:UPI0000D50A7E,UniRef:UniRef100_A0A061L7C9,UniRef:UniRef50_P28246,UniRef:UniRef90_P28246
contig_1	Pyrodigal	gene	2230380	2231075	.	-	.	ID=GCA000010485_02196_gene;locus_tag=GCA000010485_02196;gene=rsuA
contig_1	Pyrodigal	CDS	2230380	2231075	.	-	0	ID=GCA000010485_02196;Name=16S rRNA pseudouridine(516) synthase RsuA;locus_tag=GCA000010485_02196;product=16S rRNA pseudouridine(516) synthase RsuA;Dbxref=GO:0000455,GO:0003723,GO:0160136;gene=rsuA;Parent=GCA000010485_02196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_001234850.1,SO:0001217,UniParc:UPI000003EB2D,UniRef:UniRef100_P0AA43,UniRef:UniRef50_P0AA43,UniRef:UniRef90_P0AA43;ec_number=5.4.99.19
contig_1	Pyrodigal	gene	2231225	2232985	.	+	.	ID=GCA000010485_02197_gene;locus_tag=GCA000010485_02197;gene=radD
contig_1	Pyrodigal	CDS	2231225	2232985	.	+	0	ID=GCA000010485_02197;Name=Putative DNA repair helicase RadD;locus_tag=GCA000010485_02197;product=Putative DNA repair helicase RadD;Dbxref=GO:0003677,GO:0003689,GO:0003697,GO:0005524,GO:0006301,GO:0006302,GO:0006412,GO:0008270,GO:0009378,GO:0009410,GO:0010212,GO:0016887,GO:0036121,GO:0051301,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=radD;Parent=GCA000010485_02197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1061,COG:KL,RefSeq:WP_000578064.1,SO:0001217,UniParc:UPI0001C22B74,UniRef:UniRef100_A0A061L5B2,UniRef:UniRef50_P33919,UniRef:UniRef90_P33919;ec_number=3.6.4.12
contig_1	Infernal	regulatory_region	2233063	2233088	1.9e-08	+	.	ID=EFPPCJGBKI_327;Name=L25-Gammaproteobacteria ribosomal protein leader;product=L25-Gammaproteobacteria ribosomal protein leader;Dbxref=RFAM:RF03131;inference=profile:Rfam:RF03131;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2233110	2233394	.	+	.	ID=GCA000010485_02198_gene;locus_tag=GCA000010485_02198;gene=rplY
contig_1	Pyrodigal	CDS	2233110	2233394	.	+	0	ID=GCA000010485_02198;Name=50S ribosomal protein L25;locus_tag=GCA000010485_02198;product=50S ribosomal protein L25;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA000010485_02198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1825,COG:J,KEGG:K02897,RefSeq:WP_000494186.1,SO:0001217,UniParc:UPI000052A4BF,UniRef:UniRef100_B7UFK2,UniRef:UniRef50_P68919,UniRef:UniRef90_P68919
contig_1	Pyrodigal	gene	2233533	2234540	.	-	.	ID=GCA000010485_02199_gene;locus_tag=GCA000010485_02199;gene=yejK
contig_1	Pyrodigal	CDS	2233533	2234540	.	-	0	ID=GCA000010485_02199;Name=nucleoid-associated protein YejK;locus_tag=GCA000010485_02199;product=nucleoid-associated protein YejK;Dbxref=GO:0003690,GO:0003727,GO:0005737,GO:0009295,GO:0043590;gene=yejK;Parent=GCA000010485_02199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3081,COG:L,KEGG:K06899,RefSeq:WP_000050789.1,SO:0001217,UniParc:UPI00000D029B,UniRef:UniRef100_A7ZP10,UniRef:UniRef50_P33920,UniRef:UniRef90_P33920
contig_1	Pyrodigal	gene	2234722	2234949	.	+	.	ID=GCA000010485_02200_gene;locus_tag=GCA000010485_02200;gene=yejL
contig_1	Pyrodigal	CDS	2234722	2234949	.	+	0	ID=GCA000010485_02200;Name=UPF0352 protein YejL;locus_tag=GCA000010485_02200;product=UPF0352 protein YejL;gene=yejL;Parent=GCA000010485_02200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3082,COG:S,KEGG:K09904,RefSeq:WP_001135664.1,SO:0001217,UniParc:UPI00005EF40D,UniRef:UniRef100_B7UFK4,UniRef:UniRef50_P0AD24,UniRef:UniRef90_Q83KD7
contig_1	Pyrodigal	gene	2234969	2236729	.	+	.	ID=GCA000010485_02201_gene;locus_tag=GCA000010485_02201;gene=yejM
contig_1	Pyrodigal	CDS	2234969	2236729	.	+	0	ID=GCA000010485_02201;Name=LPS biosynthesis-modulating metalloenzyme YejM;locus_tag=GCA000010485_02201;product=LPS biosynthesis-modulating metalloenzyme YejM;Dbxref=GO:0005886,GO:0008484;gene=yejM;Parent=GCA000010485_02201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3083,COG:MT,KEGG:K07014,RefSeq:WP_000256203.1,SO:0001217,UniParc:UPI000013AC7E,UniRef:UniRef100_P0AD27,UniRef:UniRef50_P0AD27,UniRef:UniRef90_P0AD27
contig_1	tRNAscan-SE	gene	2236804	2236880	.	+	.	ID=GCA000010485_02202_gene;locus_tag=GCA000010485_02202;gene=trnP
contig_1	tRNAscan-SE	tRNA	2236804	2236880	.	+	.	ID=GCA000010485_02202;Name=tRNA-Pro(ggg);locus_tag=GCA000010485_02202;product=tRNA-Pro(ggg);gene=trnP;anti_codon=ggg;amino_acid=Pro;Parent=GCA000010485_02202_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	Pyrodigal	gene	2236981	2237622	.	-	.	ID=GCA000010485_02203_gene;locus_tag=GCA000010485_02203
contig_1	Pyrodigal	CDS	2236981	2237622	.	-	0	ID=GCA000010485_02203;Name=Pertactin central region domain-containing protein;locus_tag=GCA000010485_02203;product=Pertactin central region domain-containing protein;Parent=GCA000010485_02203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22B75,UniRef:UniRef100_A0A0A2S2A7,UniRef:UniRef50_A0A4C7ADQ0,UniRef:UniRef90_A0A4C7ADQ0
contig_1	Pyrodigal	gene	2237731	2237934	.	-	.	ID=GCA000010485_02204_gene;locus_tag=GCA000010485_02204;gene=yejO
contig_1	Pyrodigal	CDS	2237731	2237934	.	-	0	ID=GCA000010485_02204;Name=Putative putative outer membrane protein YejO;locus_tag=GCA000010485_02204;product=Putative putative outer membrane protein YejO;Dbxref=GO:0009279;gene=yejO;Parent=GCA000010485_02204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001332200.1,SO:0001217,UniParc:UPI0000D50A80,UniRef:UniRef100_A0A0D8VQ44,UniRef:UniRef50_P33924,UniRef:UniRef90_P33924
contig_1	Pyrodigal	gene	2238254	2238901	.	+	.	ID=GCA000010485_02205_gene;locus_tag=GCA000010485_02205;gene=narP
contig_1	Pyrodigal	CDS	2238254	2238901	.	+	0	ID=GCA000010485_02205;Name=nitrate/nitrite response regulator protein NarP;locus_tag=GCA000010485_02205;product=nitrate/nitrite response regulator protein NarP;Dbxref=GO:0000160,GO:0003677,GO:0005524,GO:0006355,GO:0042128;gene=narP;Parent=GCA000010485_02205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07685,RefSeq:WP_001113641.1,SO:0001217,UniParc:UPI00005EF410,UniRef:UniRef100_W8SWM2,UniRef:UniRef50_P31802,UniRef:UniRef90_P31802
contig_1	Pyrodigal	gene	2238936	2239988	.	-	.	ID=GCA000010485_02206_gene;locus_tag=GCA000010485_02206;gene=ccmH
contig_1	Pyrodigal	CDS	2238936	2239988	.	-	0	ID=GCA000010485_02206;Name=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;locus_tag=GCA000010485_02206;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;Dbxref=GO:0005886,GO:0017004,GO:0046872;gene=ccmH;Parent=GCA000010485_02206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001211575,COG:CO,COG:COG4235,RefSeq:WP_001211562.1,SO:0001217,UniParc:UPI0001C22B77,UniRef:UniRef100_A0A641BVM8,UniRef:UniRef50_P0ABM9,UniRef:UniRef90_P0ABM9
contig_1	Pyrodigal	gene	2239985	2240542	.	-	.	ID=GCA000010485_02207_gene;locus_tag=GCA000010485_02207;gene=dsbE
contig_1	Pyrodigal	CDS	2239985	2240542	.	-	0	ID=GCA000010485_02207;Name=thiol:disulfide interchange protein DsbE;locus_tag=GCA000010485_02207;product=thiol:disulfide interchange protein DsbE;Dbxref=GO:0005886,GO:0015036,GO:0017004,GO:0030288;gene=dsbE;Parent=GCA000010485_02207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_000824439.1,SO:0001217,UniParc:UPI00001298E2,UniRef:UniRef100_P0AA86,UniRef:UniRef50_P0AA86,UniRef:UniRef90_P0AA86
contig_1	Pyrodigal	gene	2240539	2242482	.	-	.	ID=GCA000010485_02208_gene;locus_tag=GCA000010485_02208;gene=ccmF
contig_1	Pyrodigal	CDS	2240539	2242482	.	-	0	ID=GCA000010485_02208;Name=cytochrome c-type biogenesis heme lyase CcmF;locus_tag=GCA000010485_02208;product=cytochrome c-type biogenesis heme lyase CcmF;Dbxref=GO:0005886,GO:0015232,GO:0016679,GO:0017004,GO:0020037;gene=ccmF;Parent=GCA000010485_02208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000982447,COG:CO,COG:COG1138,RefSeq:WP_000982463.1,SO:0001217,UniParc:UPI0001C22B78,UniRef:UniRef100_UPI0001C22B78,UniRef:UniRef50_P33927,UniRef:UniRef90_P33927
contig_1	Pyrodigal	gene	2242479	2242958	.	-	.	ID=GCA000010485_02209_gene;locus_tag=GCA000010485_02209;gene=ccmE
contig_1	Pyrodigal	CDS	2242479	2242958	.	-	0	ID=GCA000010485_02209;Name=cytochrome c maturation protein CcmE;locus_tag=GCA000010485_02209;product=cytochrome c maturation protein CcmE;Dbxref=GO:0005886,GO:0017004,GO:0020037,GO:0046872;gene=ccmE;Parent=GCA000010485_02209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG2332,KEGG:K02197,RefSeq:WP_001026418.1,SO:0001217,UniParc:UPI00001272E1,UniRef:UniRef100_P69490,UniRef:UniRef50_P69490,UniRef:UniRef90_P69490
contig_1	Pyrodigal	gene	2242955	2243164	.	-	.	ID=GCA000010485_02210_gene;locus_tag=GCA000010485_02210;gene=ccmD
contig_1	Pyrodigal	CDS	2242955	2243164	.	-	0	ID=GCA000010485_02210;Name=heme exporter protein CcmD;locus_tag=GCA000010485_02210;product=heme exporter protein CcmD;Dbxref=GO:0005886,GO:0015886,GO:0016020,GO:0017004,GO:1903607;gene=ccmD;Parent=GCA000010485_02210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3114,COG:U,RefSeq:WP_000186540.1,SO:0001217,UniParc:UPI00001272DC,UniRef:UniRef100_P0ABM5,UniRef:UniRef50_P0ABM5,UniRef:UniRef90_P0ABM5;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2243161	2243898	.	-	.	ID=GCA000010485_02211_gene;locus_tag=GCA000010485_02211;gene=ccmC
contig_1	Pyrodigal	CDS	2243161	2243898	.	-	0	ID=GCA000010485_02211;Name=heme exporter protein CcmC;locus_tag=GCA000010485_02211;product=heme exporter protein CcmC;Dbxref=GO:0005886,GO:0015232,GO:0017004,GO:0020037;gene=ccmC;Parent=GCA000010485_02211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295447,COG:COG0755,COG:O,RefSeq:WP_001295447.1,SO:0001217,UniParc:UPI00001272D6,UniRef:UniRef100_P0ABM1,UniRef:UniRef50_P0ABM1,UniRef:UniRef90_P0ABM1
contig_1	Pyrodigal	gene	2243940	2244602	.	-	.	ID=GCA000010485_02212_gene;locus_tag=GCA000010485_02212;gene=ccmB
contig_1	Pyrodigal	CDS	2243940	2244602	.	-	0	ID=GCA000010485_02212;Name=heme exporter protein CcmB;locus_tag=GCA000010485_02212;product=heme exporter protein CcmB;Dbxref=GO:0005886,GO:0015232,GO:0015886,GO:0017004,GO:0043190,GO:1903607,GO:1904334;gene=ccmB;Parent=GCA000010485_02212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2386,COG:O,KEGG:K02194,RefSeq:WP_000971730.1,SO:0001217,UniParc:UPI00001272D2,UniRef:UniRef100_P0ABL8,UniRef:UniRef50_P0ABL8,UniRef:UniRef90_P0ABL8;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2244599	2245216	.	-	.	ID=GCA000010485_02213_gene;locus_tag=GCA000010485_02213;gene=ccmA
contig_1	Pyrodigal	CDS	2244599	2245216	.	-	0	ID=GCA000010485_02213;Name=cytochrome c biogenesis heme-transporting ATPase CcmA;locus_tag=GCA000010485_02213;product=cytochrome c biogenesis heme-transporting ATPase CcmA;Dbxref=GO:0005524,GO:0005886,GO:0015439,GO:0016887,GO:0017004,GO:0022857;gene=ccmA;Parent=GCA000010485_02213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4133,COG:O,SO:0001217,UniParc:UPI0001C22B79,UniRef:UniRef100_A0A2S8JX25,UniRef:UniRef50_P33931,UniRef:UniRef90_Q8XE58;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	2245235	2245837	.	-	.	ID=GCA000010485_02214_gene;locus_tag=GCA000010485_02214;gene=napC
contig_1	Pyrodigal	CDS	2245235	2245837	.	-	0	ID=GCA000010485_02214;Name=cytochrome c-type protein NapC;locus_tag=GCA000010485_02214;product=cytochrome c-type protein NapC;Dbxref=GO:0005886,GO:0009055,GO:0009061,GO:0019333,GO:0020037,GO:0046872;gene=napC;Parent=GCA000010485_02214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3005,RefSeq:WP_000528376.1,SO:0001217,UniParc:UPI000012FD66,UniRef:UniRef100_P0ABL5,UniRef:UniRef50_P0ABL5,UniRef:UniRef90_P0ABL5;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2245847	2246296	.	-	.	ID=GCA000010485_02215_gene;locus_tag=GCA000010485_02215;gene=napH
contig_1	Pyrodigal	CDS	2245847	2246296	.	-	0	ID=GCA000010485_02215;Name=quinol dehydrogenase ferredoxin subunit NapH;locus_tag=GCA000010485_02215;product=quinol dehydrogenase ferredoxin subunit NapH;Dbxref=GO:0009061,GO:0042597,GO:0046872;gene=napH;Parent=GCA000010485_02215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000835174.1,SO:0001217,UniParc:UPI000012FD62,UniRef:UniRef100_P0ABL3,UniRef:UniRef50_P0ABL3,UniRef:UniRef90_P0ABL3;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2246293	2247156	.	-	.	ID=GCA000010485_02216_gene;locus_tag=GCA000010485_02216;gene=napH
contig_1	Pyrodigal	CDS	2246293	2247156	.	-	0	ID=GCA000010485_02216;Name=quinol dehydrogenase ferredoxin subunit NapH;locus_tag=GCA000010485_02216;product=quinol dehydrogenase ferredoxin subunit NapH;Dbxref=GO:0005886,GO:0016020,GO:0046872,GO:0051539;gene=napH;Parent=GCA000010485_02216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0348,RefSeq:WP_000013499.1,SO:0001217,UniParc:UPI0001C22B7A,UniRef:UniRef100_A0A066T0A0,UniRef:UniRef50_P33934,UniRef:UniRef90_P33934;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2247143	2247838	.	-	.	ID=GCA000010485_02217_gene;locus_tag=GCA000010485_02217;gene=napG
contig_1	Pyrodigal	CDS	2247143	2247838	.	-	0	ID=GCA000010485_02217;Name=ferredoxin-type protein NapG;locus_tag=GCA000010485_02217;product=ferredoxin-type protein NapG;Dbxref=GO:0042597,GO:0046872,GO:0051539;gene=napG;Parent=GCA000010485_02217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_000091291.1,SO:0001217,UniParc:UPI000012FD70,UniRef:UniRef100_P0AAL3,UniRef:UniRef50_P0AAL3,UniRef:UniRef90_P0AAL3;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2247845	2250331	.	-	.	ID=GCA000010485_02218_gene;locus_tag=GCA000010485_02218;gene=napA
contig_1	Pyrodigal	CDS	2247845	2250331	.	-	0	ID=GCA000010485_02218;Name=nitrate reductase catalytic subunit NapA;locus_tag=GCA000010485_02218;product=nitrate reductase catalytic subunit NapA;Dbxref=GO:0005506,GO:0006777,GO:0008940,GO:0009055,GO:0009325,GO:0016020,GO:0030151,GO:0042128,GO:0042597,GO:0043546,GO:0045333,GO:0050140,GO:0051539;gene=napA;Parent=GCA000010485_02218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_000778067.1,SO:0001217,UniParc:UPI00000E4A32,UniRef:UniRef100_A8A268,UniRef:UniRef50_P33937,UniRef:UniRef90_P33937;ec_number=1.9.6.1
contig_1	Pyrodigal	gene	2250328	2250591	.	-	.	ID=GCA000010485_02219_gene;locus_tag=GCA000010485_02219;gene=napD
contig_1	Pyrodigal	CDS	2250328	2250591	.	-	0	ID=GCA000010485_02219;Name=chaperone NapD;locus_tag=GCA000010485_02219;product=chaperone NapD;gene=napD;Parent=GCA000010485_02219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3062,COG:O,RefSeq:WP_000557384.1,SO:0001217,UniParc:UPI00000DEDC8,UniRef:UniRef100_E2QP73,UniRef:UniRef50_P0A9I5,UniRef:UniRef90_Q32I07
contig_1	Pyrodigal	gene	2250581	2251075	.	-	.	ID=GCA000010485_02220_gene;locus_tag=GCA000010485_02220;gene=napF
contig_1	Pyrodigal	CDS	2250581	2251075	.	-	0	ID=GCA000010485_02220;Name=ferredoxin-type protein NapF;locus_tag=GCA000010485_02220;product=ferredoxin-type protein NapF;Dbxref=GO:0005737,GO:0006979,GO:0046872,GO:0051539;gene=napF;Parent=GCA000010485_02220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1149,COG:R,RefSeq:WP_000686738.1,SO:0001217,UniParc:UPI0001C22B7B,UniRef:UniRef100_A0A061YK84,UniRef:UniRef50_P0AAL0,UniRef:UniRef90_P0AAL0
contig_1	Bakta	gene	2251091	2251132	.	-	.	ID=GCA000010485_02221_gene;locus_tag=GCA000010485_02221;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2251091	2251132	.	-	0	ID=GCA000010485_02221;Name=Orf 5' of aeg-46-5 protein;locus_tag=GCA000010485_02221;product=Orf 5' of aeg-46-5 protein;Parent=GCA000010485_02221_gene;Note=SO:0001217,UniParc:UPI00000B1185,UniRef:UniRef100_Q53300,UniRef:UniRef50_Q53300,UniRef:UniRef90_Q53300
contig_1	Pyrodigal	gene	2251184	2251348	.	+	.	ID=GCA000010485_02222_gene;locus_tag=GCA000010485_02222;gene=yojO
contig_1	Pyrodigal	CDS	2251184	2251348	.	+	0	ID=GCA000010485_02222;Name=putative protein YojO;locus_tag=GCA000010485_02222;product=putative protein YojO;gene=yojO;Parent=GCA000010485_02222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296243.1,SO:0001217,UniParc:UPI0000DACF08,UniRef:UniRef100_Q8FFQ7,UniRef:UniRef50_Q8FFQ7,UniRef:UniRef90_Q8FFQ7
contig_1	Pyrodigal	gene	2251483	2251971	.	+	.	ID=GCA000010485_02223_gene;locus_tag=GCA000010485_02223;gene=eco
contig_1	Pyrodigal	CDS	2251483	2251971	.	+	0	ID=GCA000010485_02223;Name=serine protease inhibitor ecotin;locus_tag=GCA000010485_02223;product=serine protease inhibitor ecotin;Dbxref=GO:0004867,GO:0042597;gene=eco;Parent=GCA000010485_02223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08276,RefSeq:WP_000849214.1,SO:0001217,UniParc:UPI00001D47FF,UniRef:UniRef100_A7ZP31,UniRef:UniRef50_P23827,UniRef:UniRef90_P23827
contig_1	Pyrodigal	gene	2252121	2253767	.	-	.	ID=GCA000010485_02224_gene;locus_tag=GCA000010485_02224;gene=mqo
contig_1	Pyrodigal	CDS	2252121	2253767	.	-	0	ID=GCA000010485_02224;Name=malate dehydrogenase (quinone);locus_tag=GCA000010485_02224;product=malate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=mqo;Parent=GCA000010485_02224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,KEGG:K00116,RefSeq:WP_000758053.1,SO:0001217,UniParc:UPI0001C22B7C,UniRef:UniRef100_A0A066T8I7,UniRef:UniRef50_P33940,UniRef:UniRef90_P33940;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2253985	2255628	.	-	.	ID=GCA000010485_02225_gene;locus_tag=GCA000010485_02225;gene=yojI
contig_1	Pyrodigal	CDS	2253985	2255628	.	-	0	ID=GCA000010485_02225;Name=microcin J25 efflux ABC transporter YojI;locus_tag=GCA000010485_02225;product=microcin J25 efflux ABC transporter YojI;Dbxref=GO:0015833,GO:0140359,GO:1904680;gene=yojI;Parent=GCA000010485_02225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000422182,COG:COG4615,COG:P,RefSeq:WP_000422200.1,SO:0001217,UniParc:UPI0001C22B7D,UniRef:UniRef100_A0A061YCW0,UniRef:UniRef50_P33941,UniRef:UniRef90_Q32I12
contig_1	Pyrodigal	gene	2255704	2256354	.	-	.	ID=GCA000010485_02226_gene;locus_tag=GCA000010485_02226;gene=alkB
contig_1	Pyrodigal	CDS	2255704	2256354	.	-	0	ID=GCA000010485_02226;Name=DNA oxidative demethylase AlkB;locus_tag=GCA000010485_02226;product=DNA oxidative demethylase AlkB;Dbxref=GO:0005737,GO:0005829,GO:0006281,GO:0006307,GO:0008198,GO:0035513,GO:0035515,GO:0035516,GO:0042245,GO:0051213,GO:0070989,GO:0072702;gene=alkB;Parent=GCA000010485_02226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3145,COG:L,KEGG:K03919,RefSeq:WP_000884927.1,SO:0001217,UniParc:UPI0000D50A87,UniRef:UniRef100_A0A061L3I3,UniRef:UniRef50_P05050,UniRef:UniRef90_P05050;ec_number=1.14.11.33
contig_1	Pyrodigal	gene	2256354	2257418	.	-	.	ID=GCA000010485_02227_gene;locus_tag=GCA000010485_02227;gene=ada
contig_1	Pyrodigal	CDS	2256354	2257418	.	-	0	ID=GCA000010485_02227;Name=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;locus_tag=GCA000010485_02227;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;Dbxref=GO:0003700,GO:0003908,GO:0006281,GO:0006307,GO:0006355,GO:0006974,GO:0008270,GO:0032259,GO:0043565,GO:0045892,GO:0045893;gene=ada;Parent=GCA000010485_02227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2169,COG:L,RefSeq:WP_000872491.1,SO:0001217,UniParc:UPI0001C22B7E,UniRef:UniRef100_A0A066T0A6,UniRef:UniRef50_P06134,UniRef:UniRef90_P06134;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	2257492	2258547	.	-	.	ID=GCA000010485_02228_gene;locus_tag=GCA000010485_02228;gene=apbE
contig_1	Pyrodigal	CDS	2257492	2258547	.	-	0	ID=GCA000010485_02228;Name=FAD:protein FMN transferase ApbE;locus_tag=GCA000010485_02228;product=FAD:protein FMN transferase ApbE;Dbxref=GO:0005886,GO:0016740,GO:0017013,GO:0046872,GO:1990204;gene=apbE;Parent=GCA000010485_02228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1477,COG:HO,KEGG:K03734,RefSeq:WP_000406076.1,SO:0001217,UniParc:UPI0001C22B7F,UniRef:UniRef100_A0A061YJ58,UniRef:UniRef50_P0AB85,UniRef:UniRef90_P0AB85;ec_number=2.7.1.180
contig_1	Pyrodigal	gene	2258659	2259780	.	-	.	ID=GCA000010485_02229_gene;locus_tag=GCA000010485_02229;gene=ompC
contig_1	Pyrodigal	CDS	2258659	2259780	.	-	0	ID=GCA000010485_02229;Name=porin OmpC;locus_tag=GCA000010485_02229;product=porin OmpC;Dbxref=GO:0009279,GO:0015288,GO:0034220,GO:0046930;gene=ompC;Parent=GCA000010485_02229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000865552,BlastRules:WP_000865568,COG:COG3203,COG:M,KEGG:K09475,RefSeq:WP_000865587.1,SO:0001217,UniParc:UPI0001A9502D,UniRef:UniRef100_C6K7L7,UniRef:UniRef50_P02931,UniRef:UniRef90_P06996
contig_1	Infernal	gene	2260114	2260207	.	+	.	ID=GCA000010485_02230_gene;locus_tag=GCA000010485_02230;gene=micF
contig_1	Infernal	ncRNA	2260114	2260207	1.1e-18	+	.	ID=GCA000010485_02230;Name=MicF RNA;locus_tag=GCA000010485_02230;gene=micF;product=MicF RNA;Dbxref=RFAM:RF00033;Parent=GCA000010485_02230_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00033
contig_1	Pyrodigal	gene	2260519	2263191	.	+	.	ID=GCA000010485_02231_gene;locus_tag=GCA000010485_02231;gene=rcsD
contig_1	Pyrodigal	CDS	2260519	2263191	.	+	0	ID=GCA000010485_02231;Name=phosphotransferase RcsD;locus_tag=GCA000010485_02231;product=phosphotransferase RcsD;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0009927,GO:0016774;gene=rcsD;Parent=GCA000010485_02231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2198,COG:T,KEGG:K07676,RefSeq:WP_001249136.1,SO:0001217,UniParc:UPI00000DEDD0,UniRef:UniRef100_E2QP83,UniRef:UniRef50_P39838,UniRef:UniRef90_P39838;ec_number=2.7.2.-
contig_1	Pyrodigal	gene	2263208	2263858	.	+	.	ID=GCA000010485_02232_gene;locus_tag=GCA000010485_02232;gene=rcsB
contig_1	Pyrodigal	CDS	2263208	2263858	.	+	0	ID=GCA000010485_02232;Name=transcriptional regulator RcsB;locus_tag=GCA000010485_02232;product=transcriptional regulator RcsB;Dbxref=GO:0000160,GO:0003677,GO:0006355;gene=rcsB;Parent=GCA000010485_02232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07687,RefSeq:WP_001061917.1,SO:0001217,UniParc:UPI000013347F,UniRef:UniRef100_P0DMC8,UniRef:UniRef50_P0DMC8,UniRef:UniRef90_P0DMC8,VFDB:VFC0301,VFDB:VFG049018
contig_1	Infernal	gene	2263868	2263944	.	-	.	ID=GCA000010485_02233_gene;locus_tag=GCA000010485_02233;gene=naRNA4
contig_1	Infernal	ncRNA	2263868	2263944	4e-10	-	.	ID=GCA000010485_02233;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02233;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02233_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	2263982	2264058	.	-	.	ID=GCA000010485_02234_gene;locus_tag=GCA000010485_02234;gene=naRNA4
contig_1	Infernal	ncRNA	2263982	2264058	1.6e-09	-	.	ID=GCA000010485_02234;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02234;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02234_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2264058	2266907	.	-	.	ID=GCA000010485_02235_gene;locus_tag=GCA000010485_02235;gene=rcsC
contig_1	Pyrodigal	CDS	2264058	2266907	.	-	0	ID=GCA000010485_02235;Name=two-component system sensor histidine kinase RcsC;locus_tag=GCA000010485_02235;product=two-component system sensor histidine kinase RcsC;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0006355,GO:0016020,GO:0018106;gene=rcsC;Parent=GCA000010485_02235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0784,COG:T,KEGG:K07677,RefSeq:WP_000876055.1,SO:0001217,UniParc:UPI00000DEDD1,UniRef:UniRef100_A0A066T4D8,UniRef:UniRef50_P0DMC5,UniRef:UniRef90_P0DMC5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2267074	2268900	.	+	.	ID=GCA000010485_02236_gene;locus_tag=GCA000010485_02236;gene=atoS
contig_1	Pyrodigal	CDS	2267074	2268900	.	+	0	ID=GCA000010485_02236;Name=two-component system sensor histidine kinase AtoS;locus_tag=GCA000010485_02236;product=two-component system sensor histidine kinase AtoS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0006355,GO:0007165,GO:0042803,GO:1904583;gene=atoS;Parent=GCA000010485_02236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296244.1,SO:0001217,UniParc:UPI0000E4509A,UniRef:UniRef100_E2QP86,UniRef:UniRef50_Q06067,UniRef:UniRef90_Q06067;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2268897	2270282	.	+	.	ID=GCA000010485_02237_gene;locus_tag=GCA000010485_02237;gene=atoC
contig_1	Pyrodigal	CDS	2268897	2270282	.	+	0	ID=GCA000010485_02237;Name=acetoacetate metabolism transcriptional regulator AtoC;locus_tag=GCA000010485_02237;product=acetoacetate metabolism transcriptional regulator AtoC;Dbxref=GO:0000160,GO:0003700,GO:0005524,GO:0005737,GO:0016887,GO:0043565,GO:0045893;gene=atoC;Parent=GCA000010485_02237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000125287.1,SO:0001217,UniParc:UPI0001C22B80,UniRef:UniRef100_A0A061YKY9,UniRef:UniRef50_Q06065,UniRef:UniRef90_Q06065
contig_1	Pyrodigal	gene	2270478	2271140	.	+	.	ID=GCA000010485_02238_gene;locus_tag=GCA000010485_02238;gene=atoD
contig_1	Pyrodigal	CDS	2270478	2271140	.	+	0	ID=GCA000010485_02238;Name=acetate CoA-transferase subunit alpha;locus_tag=GCA000010485_02238;product=acetate CoA-transferase subunit alpha;Dbxref=GO:0005737,GO:0008410,GO:0008775,GO:0046459,GO:0047371;gene=atoD;Parent=GCA000010485_02238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000850538.1,SO:0001217,UniParc:UPI00000DEDD3,UniRef:UniRef100_A0A066T0L7,UniRef:UniRef50_P76458,UniRef:UniRef90_P76458;ec_number=2.8.3.9
contig_1	Pyrodigal	gene	2271140	2271790	.	+	.	ID=GCA000010485_02239_gene;locus_tag=GCA000010485_02239;gene=atoA
contig_1	Pyrodigal	CDS	2271140	2271790	.	+	0	ID=GCA000010485_02239;Name=acetate CoA-transferase subunit beta;locus_tag=GCA000010485_02239;product=acetate CoA-transferase subunit beta;gene=atoA;Parent=GCA000010485_02239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000339065,RefSeq:WP_000339055.1,SO:0001217,UniParc:UPI00000DEDD4,UniRef:UniRef100_E2QP89,UniRef:UniRef50_P44874,UniRef:UniRef90_B7LM99;ec_number=2.8.3.8
contig_1	Pyrodigal	gene	2271787	2273109	.	+	.	ID=GCA000010485_02240_gene;locus_tag=GCA000010485_02240;gene=atoE
contig_1	Pyrodigal	CDS	2271787	2273109	.	+	0	ID=GCA000010485_02240;Name=Putative short-chain fatty acid transporter;locus_tag=GCA000010485_02240;product=Putative short-chain fatty acid transporter;Dbxref=GO:0005886;gene=atoE;Parent=GCA000010485_02240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2031,COG:I,KEGG:K02106,RefSeq:WP_000580278.1,SO:0001217,UniParc:UPI00000DEDD5,UniRef:UniRef100_A0A061L2S2,UniRef:UniRef50_P76460,UniRef:UniRef90_P76460
contig_1	Pyrodigal	gene	2273140	2274324	.	+	.	ID=GCA000010485_02241_gene;locus_tag=GCA000010485_02241;gene=atoB
contig_1	Pyrodigal	CDS	2273140	2274324	.	+	0	ID=GCA000010485_02241;Name=acetyl-CoA acetyltransferase;locus_tag=GCA000010485_02241;product=acetyl-CoA acetyltransferase;Dbxref=GO:0003985,GO:0005737,GO:0032991,GO:0042802,GO:0043442;gene=atoB;Parent=GCA000010485_02241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000786547,RefSeq:WP_000786535.1,SO:0001217,UniParc:UPI0001C22B81,UniRef:UniRef100_A0A066T8K2,UniRef:UniRef50_P76461,UniRef:UniRef90_P76461;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	2274398	2275174	.	-	.	ID=GCA000010485_02242_gene;locus_tag=GCA000010485_02242;gene=yfaP
contig_1	Pyrodigal	CDS	2274398	2275174	.	-	0	ID=GCA000010485_02242;Name=putative protein YfaP;locus_tag=GCA000010485_02242;product=putative protein YfaP;gene=yfaP;Parent=GCA000010485_02242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001225878.1,SO:0001217,UniParc:UPI0001C22B82,UniRef:UniRef100_A0A066T8T6,UniRef:UniRef50_P76462,UniRef:UniRef90_P76462
contig_1	Pyrodigal	gene	2275179	2276828	.	-	.	ID=GCA000010485_02243_gene;locus_tag=GCA000010485_02243;gene=yfaQ
contig_1	Pyrodigal	CDS	2275179	2276828	.	-	0	ID=GCA000010485_02243;Name=putative protein YfaQ;locus_tag=GCA000010485_02243;product=putative protein YfaQ;gene=yfaQ;Parent=GCA000010485_02243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5445,COG:S,RefSeq:WP_001104803.1,SO:0001217,UniParc:UPI0001C22B83,UniRef:UniRef100_A0A7I0L966,UniRef:UniRef50_P76463,UniRef:UniRef90_P76463
contig_1	Pyrodigal	gene	2276829	2281223	.	-	.	ID=GCA000010485_02244_gene;locus_tag=GCA000010485_02244;gene=yfaS
contig_1	Pyrodigal	CDS	2276829	2281223	.	-	0	ID=GCA000010485_02244;Name=Putative alpha-2-macroglobulin-like protein;locus_tag=GCA000010485_02244;product=Putative alpha-2-macroglobulin-like protein;Dbxref=GO:0004866;gene=yfaS;Parent=GCA000010485_02244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2373,COG:R,SO:0001217,UniParc:UPI0002A43AD3,UniRef:UniRef100_A0A7I0L1R1,UniRef:UniRef50_Q8XE35,UniRef:UniRef90_Q8XE35
contig_1	Pyrodigal	gene	2281367	2281990	.	-	.	ID=GCA000010485_02245_gene;locus_tag=GCA000010485_02245
contig_1	Pyrodigal	CDS	2281367	2281990	.	-	0	ID=GCA000010485_02245;Name=DUF1175 domain-containing protein;locus_tag=GCA000010485_02245;product=DUF1175 domain-containing protein;Parent=GCA000010485_02245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09934,RefSeq:WP_001296247.1,SO:0001217,UniParc:UPI0001C22B85,UniRef:UniRef100_A0A061YK99,UniRef:UniRef50_P76466,UniRef:UniRef90_A0A061YK99
contig_1	Pyrodigal	gene	2281987	2283675	.	-	.	ID=GCA000010485_02246_gene;locus_tag=GCA000010485_02246;gene=yfaA
contig_1	Pyrodigal	CDS	2281987	2283675	.	-	0	ID=GCA000010485_02246;Name=putative protein YfaA;locus_tag=GCA000010485_02246;product=putative protein YfaA;Dbxref=GO:0005829;gene=yfaA;Parent=GCA000010485_02246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000012323.1,SO:0001217,UniParc:UPI0001C22B86,UniRef:UniRef100_A0A0C5ELW2,UniRef:UniRef50_P17994,UniRef:UniRef90_P17994
contig_1	Pyrodigal	gene	2283824	2286451	.	-	.	ID=GCA000010485_02247_gene;locus_tag=GCA000010485_02247;gene=gyrA
contig_1	Pyrodigal	CDS	2283824	2286451	.	-	0	ID=GCA000010485_02247;Name=DNA topoisomerase (ATP-hydrolyzing) subunit A;locus_tag=GCA000010485_02247;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;Dbxref=GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0009330,GO:0034335,GO:0046677;gene=gyrA;Parent=GCA000010485_02247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_001281247.1,SO:0001217,UniParc:UPI0001C22B87,UniRef:UniRef100_A0A3K0QBM9,UniRef:UniRef50_P0AES4,UniRef:UniRef90_P0AES4;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	2286598	2287320	.	+	.	ID=GCA000010485_02248_gene;locus_tag=GCA000010485_02248;gene=ubiG
contig_1	Pyrodigal	CDS	2286598	2287320	.	+	0	ID=GCA000010485_02248;Name=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;locus_tag=GCA000010485_02248;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;Dbxref=GO:0006744,GO:0010420,GO:0032259,GO:0061542,GO:0102208;gene=ubiG;Parent=GCA000010485_02248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2227,COG:H,KEGG:K00568,RefSeq:WP_000990769.1,SO:0001217,UniParc:UPI0001C22B88,UniRef:UniRef100_A0A066T0M4,UniRef:UniRef50_P17993,UniRef:UniRef90_P17993;ec_number=2.1.1.64
contig_1	Pyrodigal	gene	2287460	2291224	.	-	.	ID=GCA000010485_02249_gene;locus_tag=GCA000010485_02249;gene=yfaL
contig_1	Pyrodigal	CDS	2287460	2291224	.	-	0	ID=GCA000010485_02249;Name=AIDA-I family autotransporter adhesin YfaL/EhaC;locus_tag=GCA000010485_02249;product=AIDA-I family autotransporter adhesin YfaL/EhaC;Dbxref=GO:0019867;gene=yfaL;Parent=GCA000010485_02249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A2E21D,UniRef:UniRef100_A0A0C5ETH5,UniRef:UniRef50_P45508,UniRef:UniRef90_A0A454A614
contig_1	Pyrodigal	gene	2291900	2294185	.	+	.	ID=GCA000010485_02250_gene;locus_tag=GCA000010485_02250;gene=nrdA
contig_1	Pyrodigal	CDS	2291900	2294185	.	+	0	ID=GCA000010485_02250;Name=class 1a ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000010485_02250;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0005829,GO:0005971,GO:0006260,GO:0009185,GO:0009263,GO:0009265,GO:0015949,GO:0042802,GO:0044183;gene=nrdA;Parent=GCA000010485_02250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_001075170.1,SO:0001217,UniParc:UPI00000D02BD,UniRef:UniRef100_C3T2Z2,UniRef:UniRef50_P00452,UniRef:UniRef90_P00452;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	2294274	2295404	.	+	.	ID=GCA000010485_02251_gene;locus_tag=GCA000010485_02251;gene=nrdB
contig_1	Pyrodigal	CDS	2294274	2295404	.	+	0	ID=GCA000010485_02251;Name=class Ia ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000010485_02251;product=class Ia ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0009263,GO:0016491,GO:0046872;gene=nrdB;Parent=GCA000010485_02251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_000332036.1,SO:0001217,UniParc:UPI00000DEDDB,UniRef:UniRef100_E2QPA1,UniRef:UniRef50_P69924,UniRef:UniRef90_P69924;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	2295404	2295658	.	+	.	ID=GCA000010485_02252_gene;locus_tag=GCA000010485_02252;gene=yfaE
contig_1	Pyrodigal	CDS	2295404	2295658	.	+	0	ID=GCA000010485_02252;Name=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;locus_tag=GCA000010485_02252;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;Dbxref=GO:0005737,GO:0006124,GO:0009055,GO:0030091,GO:0046872,GO:0051537;gene=yfaE;Parent=GCA000010485_02252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000135040,COG:C,COG:COG0633,RefSeq:WP_000135040.1,SO:0001217,UniParc:UPI00000480D7,UniRef:UniRef100_P0ABW3,UniRef:UniRef50_P0ABW3,UniRef:UniRef90_P0ABW3
contig_1	Pyrodigal	gene	2295712	2296362	.	-	.	ID=GCA000010485_02253_gene;locus_tag=GCA000010485_02253;gene=inaA
contig_1	Pyrodigal	CDS	2295712	2296362	.	-	0	ID=GCA000010485_02253;Name=lipopolysaccharide kinase InaA;locus_tag=GCA000010485_02253;product=lipopolysaccharide kinase InaA;Dbxref=GO:0005886;gene=inaA;Parent=GCA000010485_02253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000301031.1,SO:0001217,UniParc:UPI00005EF424,UniRef:UniRef100_E2QPA3,UniRef:UniRef50_P27294,UniRef:UniRef90_P27294
contig_1	Pyrodigal	gene	2296565	2297641	.	-	.	ID=GCA000010485_02254_gene;locus_tag=GCA000010485_02254;gene=glpQ
contig_1	Pyrodigal	CDS	2296565	2297641	.	-	0	ID=GCA000010485_02254;Name=glycerophosphodiester phosphodiesterase;locus_tag=GCA000010485_02254;product=glycerophosphodiester phosphodiesterase;Dbxref=GO:0005509,GO:0006071,GO:0006629,GO:0008081,GO:0008889,GO:0042597,GO:0046475,GO:0046872;gene=glpQ;Parent=GCA000010485_02254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000779086.1,SO:0001217,UniParc:UPI0001C22B8A,UniRef:UniRef100_A0A066T4F8,UniRef:UniRef50_P09394,UniRef:UniRef90_P09394;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	2297646	2299004	.	-	.	ID=GCA000010485_02255_gene;locus_tag=GCA000010485_02255;gene=glpT
contig_1	Pyrodigal	CDS	2297646	2299004	.	-	0	ID=GCA000010485_02255;Name=glycerol-3-phosphate transporter;locus_tag=GCA000010485_02255;product=glycerol-3-phosphate transporter;Dbxref=GO:0005886,GO:0006071,GO:0015169,GO:0015315,GO:0015527,GO:0015760,GO:0015793,GO:0015794,GO:0016020,GO:0035435,GO:0061513;gene=glpT;Parent=GCA000010485_02255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K02445,RefSeq:WP_000948732.1,SO:0001217,UniParc:UPI00000DEDDD,UniRef:UniRef100_E2QPA5,UniRef:UniRef50_P08194,UniRef:UniRef90_P08194
contig_1	Pyrodigal	gene	2299277	2300905	.	+	.	ID=GCA000010485_02256_gene;locus_tag=GCA000010485_02256;gene=glpA
contig_1	Pyrodigal	CDS	2299277	2300905	.	+	0	ID=GCA000010485_02256;Name=anaerobic glycerol-3-phosphate dehydrogenase subunit A;locus_tag=GCA000010485_02256;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;Dbxref=GO:0004368,GO:0005886,GO:0006072,GO:0009331,GO:0010181,GO:0019563,GO:0046168,GO:0046174,GO:0050660;gene=glpA;Parent=GCA000010485_02256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_000857235.1,SO:0001217,UniParc:UPI0001C22B8B,UniRef:UniRef100_A0A061YEG3,UniRef:UniRef50_P0A9C0,UniRef:UniRef90_P0A9C0;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	2300895	2302154	.	+	.	ID=GCA000010485_02257_gene;locus_tag=GCA000010485_02257;gene=glpB
contig_1	Pyrodigal	CDS	2300895	2302154	.	+	0	ID=GCA000010485_02257;Name=glycerol-3-phosphate dehydrogenase subunit GlpB;locus_tag=GCA000010485_02257;product=glycerol-3-phosphate dehydrogenase subunit GlpB;Dbxref=GO:0004368,GO:0005886,GO:0009061,GO:0009331,GO:0019563,GO:0046168;gene=glpB;Parent=GCA000010485_02257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3075,COG:E,RefSeq:WP_001209934.1,SO:0001217,UniParc:UPI00018875D5,UniRef:UniRef100_B7MXS2,UniRef:UniRef50_P13033,UniRef:UniRef90_P13033;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	2302151	2303341	.	+	.	ID=GCA000010485_02258_gene;locus_tag=GCA000010485_02258;gene=glpC
contig_1	Pyrodigal	CDS	2302151	2303341	.	+	0	ID=GCA000010485_02258;Name=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;locus_tag=GCA000010485_02258;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;Dbxref=GO:0004368,GO:0005886,GO:0006071,GO:0009061,GO:0009331,GO:0016020,GO:0019563,GO:0022900,GO:0046168,GO:0046872,GO:0051536,GO:0051539;gene=glpC;Parent=GCA000010485_02258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0247,KEGG:K00113,RefSeq:WP_001000369.1,SO:0001217,UniParc:UPI0001C22B8C,UniRef:UniRef100_A0A066T0C7,UniRef:UniRef50_P0A996,UniRef:UniRef90_P0A996;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	2303534	2304529	.	+	.	ID=GCA000010485_02259_gene;locus_tag=GCA000010485_02259;gene=yfaD
contig_1	Pyrodigal	CDS	2303534	2304529	.	+	0	ID=GCA000010485_02259;Name=ISNCY family transposase;locus_tag=GCA000010485_02259;product=ISNCY family transposase;Dbxref=GO:0006310,GO:1990238;gene=yfaD;Parent=GCA000010485_02259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5464,COG:L,RefSeq:WP_000140602.1,SO:0001217,UniParc:UPI0001C22B8D,UniRef:UniRef100_A0A061L3F3,UniRef:UniRef50_P37014,UniRef:UniRef90_P37014
contig_1	Pyrodigal	gene	2304542	2304787	.	+	.	ID=GCA000010485_02260_gene;locus_tag=GCA000010485_02260;gene=yfaD
contig_1	Pyrodigal	CDS	2304542	2304787	.	+	0	ID=GCA000010485_02260;Name=ISNCY family transposase;locus_tag=GCA000010485_02260;product=ISNCY family transposase;Dbxref=GO:0006310,GO:1990238;gene=yfaD;Parent=GCA000010485_02260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5464,COG:L,RefSeq:WP_000150330.1,SO:0001217,UniParc:UPI0002A438FE,UniRef:UniRef100_A0A7I0L0G6,UniRef:UniRef50_P37014,UniRef:UniRef90_P37014
contig_1	Pyrodigal	gene	2304828	2305631	.	-	.	ID=GCA000010485_02261_gene;locus_tag=GCA000010485_02261;gene=yfaU
contig_1	Pyrodigal	CDS	2304828	2305631	.	-	0	ID=GCA000010485_02261;Name=2-keto-3-deoxy-L-rhamnonate aldolase;locus_tag=GCA000010485_02261;product=2-keto-3-deoxy-L-rhamnonate aldolase;Dbxref=GO:0000287,GO:0005737,GO:0106099;gene=yfaU;Parent=GCA000010485_02261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000992982.1,SO:0001217,UniParc:UPI0001C22B8E,UniRef:UniRef100_A0A066T0N2,UniRef:UniRef50_P76469,UniRef:UniRef90_P76469;ec_number=4.1.2.53
contig_1	Pyrodigal	gene	2305649	2306938	.	-	.	ID=GCA000010485_02262_gene;locus_tag=GCA000010485_02262;gene=rhmT
contig_1	Pyrodigal	CDS	2305649	2306938	.	-	0	ID=GCA000010485_02262;Name=Inner membrane transport protein RhmT;locus_tag=GCA000010485_02262;product=Inner membrane transport protein RhmT;Dbxref=GO:0005886,GO:0022857;gene=rhmT;Parent=GCA000010485_02262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296249.1,SO:0001217,UniParc:UPI0001C22B8F,UniRef:UniRef100_A0A066T0D1,UniRef:UniRef50_Q8ZNF9,UniRef:UniRef90_P76470
contig_1	Pyrodigal	gene	2306995	2308200	.	-	.	ID=GCA000010485_02263_gene;locus_tag=GCA000010485_02263;gene=rhmD
contig_1	Pyrodigal	CDS	2306995	2308200	.	-	0	ID=GCA000010485_02263;Name=L-rhamnonate dehydratase;locus_tag=GCA000010485_02263;product=L-rhamnonate dehydratase;Dbxref=GO:0000287,GO:0009063,GO:0016052,GO:0050032;gene=rhmD;Parent=GCA000010485_02263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,KEGG:K12661,RefSeq:WP_001296250.1,SO:0001217,UniParc:UPI0001E8B5E2,UniRef:UniRef100_A0A066T4G9,UniRef:UniRef50_P77215,UniRef:UniRef90_P77215;ec_number=4.2.1.90
contig_1	Pyrodigal	gene	2308215	2308997	.	-	.	ID=GCA000010485_02264_gene;locus_tag=GCA000010485_02264;gene=rhmR
contig_1	Pyrodigal	CDS	2308215	2308997	.	-	0	ID=GCA000010485_02264;Name=putative HTH-type transcriptional regulator RhmR;locus_tag=GCA000010485_02264;product=putative HTH-type transcriptional regulator RhmR;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=rhmR;Parent=GCA000010485_02264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000894189.1,SO:0001217,UniParc:UPI0001C22B91,UniRef:UniRef100_A0A061L565,UniRef:UniRef50_P77732,UniRef:UniRef90_P77732
contig_1	Pyrodigal	gene	2309217	2310419	.	-	.	ID=GCA000010485_02265_gene;locus_tag=GCA000010485_02265;gene=yfaY
contig_1	Pyrodigal	CDS	2309217	2310419	.	-	0	ID=GCA000010485_02265;Name=nicotinamide mononucleotide deamidase-related protein YfaY;locus_tag=GCA000010485_02265;product=nicotinamide mononucleotide deamidase-related protein YfaY;gene=yfaY;Parent=GCA000010485_02265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000921607.1,SO:0001217,UniParc:UPI000191E69D,UniRef:UniRef100_E2QPB4,UniRef:UniRef50_P77808,UniRef:UniRef90_P77808
contig_1	Pyrodigal	gene	2310519	2311061	.	-	.	ID=GCA000010485_02266_gene;locus_tag=GCA000010485_02266;gene=yfaZ
contig_1	Pyrodigal	CDS	2310519	2311061	.	-	0	ID=GCA000010485_02266;Name=Outer membrane protein YfaZ;locus_tag=GCA000010485_02266;product=Outer membrane protein YfaZ;Dbxref=GO:0009279;gene=yfaZ;Parent=GCA000010485_02266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296251.1,SO:0001217,UniParc:UPI00005EF42E,UniRef:UniRef100_E2QPB5,UniRef:UniRef50_P76471,UniRef:UniRef90_P76471
contig_1	Pyrodigal	gene	2311340	2311765	.	+	.	ID=GCA000010485_02267_gene;locus_tag=GCA000010485_02267;gene=nudI
contig_1	Pyrodigal	CDS	2311340	2311765	.	+	0	ID=GCA000010485_02267;Name=nucleoside triphosphatase NudI;locus_tag=GCA000010485_02267;product=nucleoside triphosphatase NudI;Dbxref=GO:0000287,GO:0004170,GO:0016818,GO:0036218,GO:0047840,GO:0106379;gene=nudI;Parent=GCA000010485_02267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001249883.1,SO:0001217,UniParc:UPI00000DEDE8,UniRef:UniRef100_Q8FFM5,UniRef:UniRef50_P52006,UniRef:UniRef90_P52006;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	2311804	2312406	.	-	.	ID=GCA000010485_02268_gene;locus_tag=GCA000010485_02268;gene=ais
contig_1	Pyrodigal	CDS	2311804	2312406	.	-	0	ID=GCA000010485_02268;Name=Lipopolysaccharide core heptose(II)-phosphate phosphatase;locus_tag=GCA000010485_02268;product=Lipopolysaccharide core heptose(II)-phosphate phosphatase;Dbxref=GO:0008653,GO:0016791,GO:0042597;gene=ais;Parent=GCA000010485_02268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000879110.1,SO:0001217,UniParc:UPI0000E450A6,UniRef:UniRef100_B7UFR4,UniRef:UniRef50_Q8ZNF4,UniRef:UniRef90_B7UFR4;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	2312696	2313853	.	+	.	ID=GCA000010485_02269_gene;locus_tag=GCA000010485_02269;gene=arnB
contig_1	Pyrodigal	CDS	2312696	2313853	.	+	0	ID=GCA000010485_02269;Name=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;locus_tag=GCA000010485_02269;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;Dbxref=GO:0008483,GO:0009103,GO:0009245,GO:0016020,GO:0030170,GO:0046677,GO:0099620;gene=arnB;Parent=GCA000010485_02269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07806,SO:0001217,UniRef:UniRef50_Q8ZNF3,UniRef:UniRef90_P77690;ec_number=2.6.1.87
contig_1	Pyrodigal	gene	2313857	2314825	.	+	.	ID=GCA000010485_02270_gene;locus_tag=GCA000010485_02270;gene=arnC
contig_1	Pyrodigal	CDS	2313857	2314825	.	+	0	ID=GCA000010485_02270;Name=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;locus_tag=GCA000010485_02270;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;Dbxref=GO:0005886,GO:0009103,GO:0009245,GO:0016780,GO:0036108,GO:0046677,GO:0099621;gene=arnC;Parent=GCA000010485_02270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10012,RefSeq:WP_000461638.1,SO:0001217,UniParc:UPI0001C22B93,UniRef:UniRef100_A0A066T8W8,UniRef:UniRef50_P77757,UniRef:UniRef90_P77757;ec_number=2.4.2.53
contig_1	Pyrodigal	gene	2314825	2316807	.	+	.	ID=GCA000010485_02271_gene;locus_tag=GCA000010485_02271;gene=arnA
contig_1	Pyrodigal	CDS	2314825	2316807	.	+	0	ID=GCA000010485_02271;Name=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;locus_tag=GCA000010485_02271;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;Dbxref=GO:0009058,GO:0009103,GO:0009245,GO:0016020,GO:0016742,GO:0016831,GO:0046677,GO:0099618,GO:0099619;gene=arnA;Parent=GCA000010485_02271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10011,RefSeq:WP_000860311.1,SO:0001217,UniParc:UPI0001C22B94,UniRef:UniRef100_A0A066T0N6,UniRef:UniRef50_P77398,UniRef:UniRef90_P77398;ec_number=2.1.2.13
contig_1	Pyrodigal	gene	2316804	2317694	.	+	.	ID=GCA000010485_02272_gene;locus_tag=GCA000010485_02272;gene=arnD
contig_1	Pyrodigal	CDS	2316804	2317694	.	+	0	ID=GCA000010485_02272;Name=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;locus_tag=GCA000010485_02272;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;Dbxref=GO:0009103,GO:0009245,GO:0016020,GO:0016810,GO:0016811,GO:0036108,GO:0046677;gene=arnD;Parent=GCA000010485_02272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0726,COG:GM,KEGG:K13014,RefSeq:WP_000169713.1,SO:0001217,UniParc:UPI00005EF433,UniRef:UniRef100_B7MXT7,UniRef:UniRef50_P76472,UniRef:UniRef90_P76472;ec_number=3.5.1.n3
contig_1	Pyrodigal	gene	2317694	2319346	.	+	.	ID=GCA000010485_02273_gene;locus_tag=GCA000010485_02273;gene=arnT
contig_1	Pyrodigal	CDS	2317694	2319346	.	+	0	ID=GCA000010485_02273;Name=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;locus_tag=GCA000010485_02273;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;Dbxref=GO:0000030,GO:0005886,GO:0006493,GO:0009103,GO:0009245,GO:0016020,GO:0016763,GO:1901505;gene=arnT;Parent=GCA000010485_02273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1807,COG:M,KEGG:K07264,RefSeq:WP_000844008.1,SO:0001217,UniParc:UPI0001C22B95,UniRef:UniRef100_A0A066T4H8,UniRef:UniRef50_Q47377,UniRef:UniRef90_Q47377;ec_number=2.4.2.43
contig_1	Pyrodigal	gene	2319343	2319678	.	+	.	ID=GCA000010485_02274_gene;locus_tag=GCA000010485_02274;gene=arnE
contig_1	Pyrodigal	CDS	2319343	2319678	.	+	0	ID=GCA000010485_02274;Name=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;locus_tag=GCA000010485_02274;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;Dbxref=GO:0005886,GO:0009103,GO:0009245,GO:1901505;gene=arnE;Parent=GCA000010485_02274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000638016.1,SO:0001217,UniParc:UPI00005EF435,UniRef:UniRef100_B7MG25,UniRef:UniRef50_O52328,UniRef:UniRef90_Q8X4J8
contig_1	Pyrodigal	gene	2319678	2320064	.	+	.	ID=GCA000010485_02275_gene;locus_tag=GCA000010485_02275;gene=arnT
contig_1	Pyrodigal	CDS	2319678	2320064	.	+	0	ID=GCA000010485_02275;Name=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;locus_tag=GCA000010485_02275;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;Dbxref=GO:0000030,GO:0005886,GO:0006493,GO:0009103,GO:0009245,GO:0016020,GO:0016763,GO:1901505;gene=arnT;Parent=GCA000010485_02275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07264,RefSeq:WP_000523864.1,SO:0001217,UniParc:UPI0000376B11,UniRef:UniRef100_B7UFS1,UniRef:UniRef50_O52327,UniRef:UniRef90_B7UFS1;ec_number=2.4.2.43
contig_1	Pyrodigal	gene	2320058	2320324	.	-	.	ID=GCA000010485_02276_gene;locus_tag=GCA000010485_02276;gene=pmrD
contig_1	Pyrodigal	CDS	2320058	2320324	.	-	0	ID=GCA000010485_02276;Name=signal transduction protein PmrD;locus_tag=GCA000010485_02276;product=signal transduction protein PmrD;Dbxref=GO:0046677;gene=pmrD;Parent=GCA000010485_02276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19238,RefSeq:WP_001296254.1,SO:0001217,UniParc:UPI0001C22B96,UniRef:UniRef100_A0A061YEH7,UniRef:UniRef50_P37590,UniRef:UniRef90_P37590
contig_1	Pyrodigal	gene	2320434	2321789	.	-	.	ID=GCA000010485_02277_gene;locus_tag=GCA000010485_02277;gene=menE
contig_1	Pyrodigal	CDS	2320434	2321789	.	-	0	ID=GCA000010485_02277;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000010485_02277;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234,GO:0032991,GO:0042802;gene=menE;Parent=GCA000010485_02277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000577585.1,SO:0001217,UniParc:UPI0001C22B97,UniRef:UniRef100_A0A061YID2,UniRef:UniRef50_P37353,UniRef:UniRef90_P37353;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	2321786	2322748	.	-	.	ID=GCA000010485_02278_gene;locus_tag=GCA000010485_02278;gene=menC
contig_1	Pyrodigal	CDS	2321786	2322748	.	-	0	ID=GCA000010485_02278;Name=o-succinylbenzoate synthase;locus_tag=GCA000010485_02278;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016836,GO:0043748;gene=menC;Parent=GCA000010485_02278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1441,COG:H,KEGG:K02549,RefSeq:WP_001255589.1,SO:0001217,UniParc:UPI0001C22B98,UniRef:UniRef100_A0A066T4I4,UniRef:UniRef50_P29208,UniRef:UniRef90_P29208;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	2322748	2323605	.	-	.	ID=GCA000010485_02279_gene;locus_tag=GCA000010485_02279;gene=menB
contig_1	Pyrodigal	CDS	2322748	2323605	.	-	0	ID=GCA000010485_02279;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000010485_02279;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234,GO:0071890;gene=menB;Parent=GCA000010485_02279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01661,RefSeq:WP_000639996.1,SO:0001217,UniParc:UPI000012EEE5,UniRef:UniRef100_P0ABU0,UniRef:UniRef50_P0ABU0,UniRef:UniRef90_P0ABU0;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	2323620	2324378	.	-	.	ID=GCA000010485_02280_gene;locus_tag=GCA000010485_02280;gene=menH
contig_1	Pyrodigal	CDS	2323620	2324378	.	-	0	ID=GCA000010485_02280;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA000010485_02280;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA000010485_02280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000600520.1,SO:0001217,UniParc:UPI0001C22B99,UniRef:UniRef100_A0A066T8X8,UniRef:UniRef50_P37355,UniRef:UniRef90_P37355;ec_number=4.2.99.20
contig_1	Pyrodigal	gene	2324375	2326045	.	-	.	ID=GCA000010485_02281_gene;locus_tag=GCA000010485_02281;gene=menD
contig_1	Pyrodigal	CDS	2324375	2326045	.	-	0	ID=GCA000010485_02281;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000010485_02281;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000010485_02281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_000116370.1,SO:0001217,UniParc:UPI000160890A,UniRef:UniRef100_B7MG32,UniRef:UniRef50_P17109,UniRef:UniRef90_P17109;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	2326134	2327429	.	-	.	ID=GCA000010485_02282_gene;locus_tag=GCA000010485_02282;gene=menF
contig_1	Pyrodigal	CDS	2326134	2327429	.	-	0	ID=GCA000010485_02282;Name=isochorismate synthase MenF;locus_tag=GCA000010485_02282;product=isochorismate synthase MenF;Dbxref=GO:0000287,GO:0008909,GO:0009234;gene=menF;Parent=GCA000010485_02282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,RefSeq:WP_001191434.1,SO:0001217,UniParc:UPI0001C22B9A,UniRef:UniRef100_A0A066T0E9,UniRef:UniRef50_P38051,UniRef:UniRef90_P38051;ec_number=5.4.4.2
contig_1	Pyrodigal	gene	2327508	2327813	.	-	.	ID=GCA000010485_02283_gene;locus_tag=GCA000010485_02283;gene=elaB
contig_1	Pyrodigal	CDS	2327508	2327813	.	-	0	ID=GCA000010485_02283;Name=stress response protein ElaB;locus_tag=GCA000010485_02283;product=stress response protein ElaB;Dbxref=GO:0005829,GO:0005886,GO:0006974,GO:0033554,GO:0043022;gene=elaB;Parent=GCA000010485_02283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4575,COG:J,RefSeq:WP_000070621.1,SO:0001217,UniParc:UPI0000129E3E,UniRef:UniRef100_P0AEH5,UniRef:UniRef50_P0AEH5,UniRef:UniRef90_P0AEH5
contig_1	Pyrodigal	gene	2327868	2328329	.	-	.	ID=GCA000010485_02284_gene;locus_tag=GCA000010485_02284
contig_1	Pyrodigal	CDS	2327868	2328329	.	-	0	ID=GCA000010485_02284;Name=GNAT family N-acetyltransferase;locus_tag=GCA000010485_02284;product=GNAT family N-acetyltransferase;Parent=GCA000010485_02284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02348,RefSeq:WP_000568142.1,SO:0001217,UniParc:UPI00000DEDF8,UniRef:UniRef100_E2QPD3,UniRef:UniRef50_A8ADW6,UniRef:UniRef90_E2QPD3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2328394	2329311	.	+	.	ID=GCA000010485_02285_gene;locus_tag=GCA000010485_02285;gene=rbn
contig_1	Pyrodigal	CDS	2328394	2329311	.	+	0	ID=GCA000010485_02285;Name=ribonuclease BN;locus_tag=GCA000010485_02285;product=ribonuclease BN;Dbxref=GO:0004527,GO:0008270,GO:0016891,GO:0042780,GO:0042781;gene=rbn;Parent=GCA000010485_02285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1234,COG:J,KEGG:K00784,RefSeq:WP_000420117.1,SO:0001217,UniParc:UPI0001C22B9B,UniRef:UniRef100_A0A061L3D3,UniRef:UniRef50_P0A8V0,UniRef:UniRef90_Q8XCZ0;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2329432	2331174	.	-	.	ID=GCA000010485_02286_gene;locus_tag=GCA000010485_02286;gene=yfbK
contig_1	Pyrodigal	CDS	2329432	2331174	.	-	0	ID=GCA000010485_02286;Name=putative protein YfbK;locus_tag=GCA000010485_02286;product=putative protein YfbK;gene=yfbK;Parent=GCA000010485_02286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001244794.1,SO:0001217,UniParc:UPI0001C22B9C,UniRef:UniRef100_A0A066T0Q2,UniRef:UniRef50_P76481,UniRef:UniRef90_P76481
contig_1	Pyrodigal	gene	2331312	2332283	.	+	.	ID=GCA000010485_02287_gene;locus_tag=GCA000010485_02287;gene=yfbL
contig_1	Pyrodigal	CDS	2331312	2332283	.	+	0	ID=GCA000010485_02287;Name=putative protein YfbL;locus_tag=GCA000010485_02287;product=putative protein YfbL;Dbxref=GO:0006508,GO:0008235,GO:0016020;gene=yfbL;Parent=GCA000010485_02287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531844.1,SO:0001217,UniParc:UPI0002A3152B,UniRef:UniRef100_A0A0A2S1W2,UniRef:UniRef50_P76482,UniRef:UniRef90_P76482
contig_1	Pyrodigal	gene	2332386	2332889	.	+	.	ID=GCA000010485_02288_gene;locus_tag=GCA000010485_02288;gene=yfbM
contig_1	Pyrodigal	CDS	2332386	2332889	.	+	0	ID=GCA000010485_02288;Name=Protein YfbM;locus_tag=GCA000010485_02288;product=Protein YfbM;gene=yfbM;Parent=GCA000010485_02288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000525373.1,SO:0001217,UniParc:UPI00000DEDFD,UniRef:UniRef100_A0A067HDS6,UniRef:UniRef50_P76483,UniRef:UniRef90_P76483
contig_1	Pyrodigal	gene	2332956	2334413	.	-	.	ID=GCA000010485_02289_gene;locus_tag=GCA000010485_02289;gene=nuoN
contig_1	Pyrodigal	CDS	2332956	2334413	.	-	0	ID=GCA000010485_02289;Name=NADH-quinone oxidoreductase subunit NuoN;locus_tag=GCA000010485_02289;product=NADH-quinone oxidoreductase subunit NuoN;Dbxref=GO:0005886,GO:0008137,GO:0042773,GO:0048038,GO:0050136;gene=nuoN;Parent=GCA000010485_02289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1007,RefSeq:WP_000156701.1,SO:0001217,UniParc:UPI00005EEC5A,UniRef:UniRef100_P0AFF0,UniRef:UniRef50_P0AFF0,UniRef:UniRef90_P0AFF0;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	2334420	2335949	.	-	.	ID=GCA000010485_02290_gene;locus_tag=GCA000010485_02290;gene=nuoM
contig_1	Pyrodigal	CDS	2334420	2335949	.	-	0	ID=GCA000010485_02290;Name=NADH-quinone oxidoreductase subunit M;locus_tag=GCA000010485_02290;product=NADH-quinone oxidoreductase subunit M;Dbxref=GO:0005886,GO:0008137,GO:0009060,GO:0015990,GO:0016020,GO:0022904,GO:0030964,GO:0042773,GO:0045271,GO:0048039;gene=nuoM;Parent=GCA000010485_02290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1008,KEGG:K00342,RefSeq:WP_000926465.1,SO:0001217,UniParc:UPI0001C22B9E,UniRef:UniRef100_A0A066T8Y6,UniRef:UniRef50_P0AFE8,UniRef:UniRef90_P0AFE8;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2336113	2337954	.	-	.	ID=GCA000010485_02291_gene;locus_tag=GCA000010485_02291;gene=nuoL
contig_1	Pyrodigal	CDS	2336113	2337954	.	-	0	ID=GCA000010485_02291;Name=NADH-quinone oxidoreductase subunit L;locus_tag=GCA000010485_02291;product=NADH-quinone oxidoreductase subunit L;Dbxref=GO:0005886,GO:0008137,GO:0015990,GO:0016020,GO:0022904,GO:0030964,GO:0042773,GO:0045271,GO:0048038;gene=nuoL;Parent=GCA000010485_02291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1009,KEGG:K00341,RefSeq:WP_001056618.1,SO:0001217,UniParc:UPI00000D0408,UniRef:UniRef100_C3T2G2,UniRef:UniRef50_P33607,UniRef:UniRef90_P33607;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	2337951	2338253	.	-	.	ID=GCA000010485_02292_gene;locus_tag=GCA000010485_02292;gene=nuoK
contig_1	Pyrodigal	CDS	2337951	2338253	.	-	0	ID=GCA000010485_02292;Name=NADH-quinone oxidoreductase subunit NuoK;locus_tag=GCA000010485_02292;product=NADH-quinone oxidoreductase subunit NuoK;Dbxref=GO:0005886,GO:0016651,GO:0030964,GO:0042773,GO:0048038,GO:0050136;gene=nuoK;Parent=GCA000010485_02292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0713,KEGG:K00340,RefSeq:WP_000612644.1,SO:0001217,UniParc:UPI0000130A0D,UniRef:UniRef100_A8ADW0,UniRef:UniRef50_Q7CQ53,UniRef:UniRef90_Q7CQ53;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2338250	2338804	.	-	.	ID=GCA000010485_02293_gene;locus_tag=GCA000010485_02293;gene=nuoJ
contig_1	Pyrodigal	CDS	2338250	2338804	.	-	0	ID=GCA000010485_02293;Name=NADH-quinone oxidoreductase subunit J;locus_tag=GCA000010485_02293;product=NADH-quinone oxidoreductase subunit J;Dbxref=GO:0005886,GO:0008137,GO:0048038;gene=nuoJ;Parent=GCA000010485_02293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0839,RefSeq:WP_000393511.1,SO:0001217,UniParc:UPI0000130A08,UniRef:UniRef100_P0AFE0,UniRef:UniRef50_P0AFE0,UniRef:UniRef90_P0AFE0;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2338816	2339358	.	-	.	ID=GCA000010485_02294_gene;locus_tag=GCA000010485_02294;gene=nuoI
contig_1	Pyrodigal	CDS	2338816	2339358	.	-	0	ID=GCA000010485_02294;Name=NADH-quinone oxidoreductase subunit NuoI;locus_tag=GCA000010485_02294;product=NADH-quinone oxidoreductase subunit NuoI;Dbxref=GO:0005506,GO:0005886,GO:0009060,GO:0016020,GO:0016651,GO:0048038,GO:0050136,GO:0051539;gene=nuoI;Parent=GCA000010485_02294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1143,RefSeq:WP_000172749.1,SO:0001217,UniParc:UPI0000130A02,UniRef:UniRef100_P0AFD6,UniRef:UniRef50_P0AFD6,UniRef:UniRef90_P0AFD6;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2339373	2340350	.	-	.	ID=GCA000010485_02295_gene;locus_tag=GCA000010485_02295;gene=nuoH
contig_1	Pyrodigal	CDS	2339373	2340350	.	-	0	ID=GCA000010485_02295;Name=NADH-quinone oxidoreductase subunit NuoH;locus_tag=GCA000010485_02295;product=NADH-quinone oxidoreductase subunit NuoH;Dbxref=GO:0003954,GO:0005886,GO:0009060,GO:0016655,GO:0048038;gene=nuoH;Parent=GCA000010485_02295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1005,KEGG:K00337,RefSeq:WP_000118512.1,SO:0001217,UniParc:UPI00000DEE00,UniRef:UniRef100_B7MG46,UniRef:UniRef50_P0AFD4,UniRef:UniRef90_P0AFD4;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2340347	2343073	.	-	.	ID=GCA000010485_02296_gene;locus_tag=GCA000010485_02296;gene=nuoG
contig_1	Pyrodigal	CDS	2340347	2343073	.	-	0	ID=GCA000010485_02296;Name=NADH-quinone oxidoreductase subunit NuoG;locus_tag=GCA000010485_02296;product=NADH-quinone oxidoreductase subunit NuoG;Dbxref=GO:0003954,GO:0006120,GO:0008137,GO:0016020,GO:0042773,GO:0043546,GO:0046872,GO:0048038,GO:0050136,GO:0051536,GO:0051537,GO:0051539,GO:1990204;gene=nuoG;Parent=GCA000010485_02296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1034,RefSeq:WP_001296257.1,SO:0001217,UniParc:UPI00016A22A7,UniRef:UniRef100_A0A023LCA9,UniRef:UniRef50_P33602,UniRef:UniRef90_P33602;ec_number=7.1.1.-
contig_1	Infernal	regulatory_region	2343081	2343123	9.7e-08	-	.	ID=EFPPCJGBKI_328;Name=nuoG RNA;product=nuoG RNA;Dbxref=RFAM:RF01748;inference=profile:Rfam:RF01748;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2343126	2344463	.	-	.	ID=GCA000010485_02297_gene;locus_tag=GCA000010485_02297;gene=nuoF
contig_1	Pyrodigal	CDS	2343126	2344463	.	-	0	ID=GCA000010485_02297;Name=NADH-quinone oxidoreductase subunit NuoF;locus_tag=GCA000010485_02297;product=NADH-quinone oxidoreductase subunit NuoF;Dbxref=GO:0008137,GO:0051539;gene=nuoF;Parent=GCA000010485_02297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000789507.1,SO:0001217,UniParc:UPI00000DEE02,UniRef:UniRef100_E2QPE5,UniRef:UniRef50_P31979,UniRef:UniRef90_E2QPE5;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	2344460	2344960	.	-	.	ID=GCA000010485_02298_gene;locus_tag=GCA000010485_02298;gene=nuoE
contig_1	Pyrodigal	CDS	2344460	2344960	.	-	0	ID=GCA000010485_02298;Name=NADH-quinone oxidoreductase subunit NuoE;locus_tag=GCA000010485_02298;product=NADH-quinone oxidoreductase subunit NuoE;Dbxref=GO:0003954,GO:0016491,GO:0046872,GO:0048038,GO:0051537;gene=nuoE;Parent=GCA000010485_02298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1905,RefSeq:WP_000545042.1,SO:0001217,UniParc:UPI00001309E7,UniRef:UniRef100_P0AFD1,UniRef:UniRef50_P0AFD1,UniRef:UniRef90_P0AFD1;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2344963	2346765	.	-	.	ID=GCA000010485_02299_gene;locus_tag=GCA000010485_02299;gene=nuoC
contig_1	Pyrodigal	CDS	2344963	2346765	.	-	0	ID=GCA000010485_02299;Name=NADH-quinone oxidoreductase subunit C/D;locus_tag=GCA000010485_02299;product=NADH-quinone oxidoreductase subunit C/D;Dbxref=GO:0005886,GO:0008137,GO:0030964,GO:0048038,GO:0050136,GO:0051287;gene=nuoC;Parent=GCA000010485_02299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0852,RefSeq:WP_000247881.1,SO:0001217,UniParc:UPI00000DEE03,UniRef:UniRef100_B7MG50,UniRef:UniRef50_P33599,UniRef:UniRef90_P33599;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	2346859	2347521	.	-	.	ID=GCA000010485_02300_gene;locus_tag=GCA000010485_02300;gene=nuoB
contig_1	Pyrodigal	CDS	2346859	2347521	.	-	0	ID=GCA000010485_02300;Name=NADH-quinone oxidoreductase subunit NuoB;locus_tag=GCA000010485_02300;product=NADH-quinone oxidoreductase subunit NuoB;Dbxref=GO:0005506,GO:0005886,GO:0008137,GO:0009060,GO:0015990,GO:0045271,GO:0048038,GO:0050136,GO:0051539;gene=nuoB;Parent=GCA000010485_02300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000236331,BlastRules:WP_000386733,COG:C,COG:COG0377,RefSeq:WP_000386733.1,SO:0001217,UniParc:UPI00001309D6,UniRef:UniRef100_P0AFC7,UniRef:UniRef50_P0AFC7,UniRef:UniRef90_P0AFC7;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	2347537	2347980	.	-	.	ID=GCA000010485_02301_gene;locus_tag=GCA000010485_02301;gene=nuoA
contig_1	Pyrodigal	CDS	2347537	2347980	.	-	0	ID=GCA000010485_02301;Name=NADH-quinone oxidoreductase subunit NuoA;locus_tag=GCA000010485_02301;product=NADH-quinone oxidoreductase subunit NuoA;Dbxref=GO:0005886,GO:0008137,GO:0030964,GO:0048038,GO:0050136;gene=nuoA;Parent=GCA000010485_02301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000062993,COG:C,COG:COG0838,RefSeq:WP_000062996.1,SO:0001217,UniParc:UPI0001C22B9F,UniRef:UniRef100_A0A061YEJ5,UniRef:UniRef50_P0AFC3,UniRef:UniRef90_P0AFC3;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	2348243	2348407	.	+	.	ID=GCA000010485_02302_gene;locus_tag=GCA000010485_02302;pseudogene=unitary
contig_1	Pyrodigal	CDS	2348243	2348407	.	+	0	ID=GCA000010485_02302;Name=hypothetical protein;locus_tag=GCA000010485_02302;product=hypothetical protein;pseudogene=unitary;Parent=GCA000010485_02302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000245E5AA,UniRef:UniRef100_A0A0D6IYW7,UniRef:UniRef50_A0A377D1W3,UniRef:UniRef50_A0A8B6WVV8,UniRef:UniRef90_A0A0I0B9N5,UniRef:UniRef90_A0A8B6WVV8
contig_1	Pyrodigal	gene	2348610	2349548	.	-	.	ID=GCA000010485_02303_gene;locus_tag=GCA000010485_02303;gene=lrhA
contig_1	Pyrodigal	CDS	2348610	2349548	.	-	0	ID=GCA000010485_02303;Name=transcriptional regulator LrhA;locus_tag=GCA000010485_02303;product=transcriptional regulator LrhA;Dbxref=GO:0000987,GO:0003700,GO:0006351,GO:0006355,GO:0043565,GO:0045892,GO:0045893;gene=lrhA;Parent=GCA000010485_02303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000622291.1,SO:0001217,UniParc:UPI0001C22BA0,UniRef:UniRef100_A0A066T4L0,UniRef:UniRef50_P36771,UniRef:UniRef90_P36771
contig_1	Pyrodigal	gene	2350468	2351685	.	+	.	ID=GCA000010485_02304_gene;locus_tag=GCA000010485_02304;gene=alaA
contig_1	Pyrodigal	CDS	2350468	2351685	.	+	0	ID=GCA000010485_02304;Name=alanine transaminase AlaA;locus_tag=GCA000010485_02304;product=alanine transaminase AlaA;Dbxref=GO:0004021,GO:0005737,GO:0030170,GO:0030632;gene=alaA;Parent=GCA000010485_02304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000074527,COG:COG0436,COG:E,RefSeq:WP_000074527.1,SO:0001217,UniParc:UPI000013ADE4,UniRef:UniRef100_P0A959,UniRef:UniRef50_P0A959,UniRef:UniRef90_P0A959;ec_number=2.6.1.2
contig_1	Pyrodigal	gene	2351769	2352368	.	+	.	ID=GCA000010485_02305_gene;locus_tag=GCA000010485_02305;gene=yfbR
contig_1	Pyrodigal	CDS	2351769	2352368	.	+	0	ID=GCA000010485_02305;Name=5'-deoxynucleotidase;locus_tag=GCA000010485_02305;product=5'-deoxynucleotidase;Dbxref=GO:0000166,GO:0002953,GO:0005737,GO:0046872;gene=yfbR;Parent=GCA000010485_02305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1896,COG:FR,KEGG:K08722,RefSeq:WP_000813854.1,SO:0001217,UniParc:UPI00000DEE05,UniRef:UniRef100_B7MG55,UniRef:UniRef50_P76491,UniRef:UniRef90_Q8ZNE0;ec_number=3.1.3.89
contig_1	Pyrodigal	gene	2352427	2354259	.	-	.	ID=GCA000010485_02306_gene;locus_tag=GCA000010485_02306;gene=yfbS
contig_1	Pyrodigal	CDS	2352427	2354259	.	-	0	ID=GCA000010485_02306;Name=putative transporter YfbS;locus_tag=GCA000010485_02306;product=putative transporter YfbS;Dbxref=GO:0005886,GO:0006813,GO:0008324;gene=yfbS;Parent=GCA000010485_02306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_001012895.1,SO:0001217,UniParc:UPI00000DEE06,UniRef:UniRef100_A0A0H2VBH3,UniRef:UniRef50_P0AFU2,UniRef:UniRef90_P0AFU2
contig_1	Pyrodigal	gene	2354346	2354996	.	-	.	ID=GCA000010485_02307_gene;locus_tag=GCA000010485_02307;gene=hxpA
contig_1	Pyrodigal	CDS	2354346	2354996	.	-	0	ID=GCA000010485_02307;Name=hexitol phosphatase HxpA;locus_tag=GCA000010485_02307;product=hexitol phosphatase HxpA;Dbxref=GO:0000287,GO:0005975,GO:0008801,GO:0030145,GO:0043136,GO:0050084,GO:0050286,GO:0050308,GO:0050897;gene=hxpA;Parent=GCA000010485_02307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001203392,COG:COG0637,COG:G,RefSeq:WP_001203415.1,SO:0001217,UniParc:UPI00000DEE07,UniRef:UniRef100_E2QPF4,UniRef:UniRef50_P77625,UniRef:UniRef90_P77625;ec_number=3.1.3.23
contig_1	Pyrodigal	gene	2355007	2355501	.	-	.	ID=GCA000010485_02308_gene;locus_tag=GCA000010485_02308;gene=yfbU
contig_1	Pyrodigal	CDS	2355007	2355501	.	-	0	ID=GCA000010485_02308;Name=YfbU family protein;locus_tag=GCA000010485_02308;product=YfbU family protein;Dbxref=GO:0005829,GO:0006974,GO:0042802;gene=yfbU;Parent=GCA000010485_02308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3013,COG:S,KEGG:K09161,RefSeq:WP_000426124.1,SO:0001217,UniParc:UPI000013ADEB,UniRef:UniRef100_P0A8W8,UniRef:UniRef50_P0A8W8,UniRef:UniRef90_P0A8W8
contig_1	Pyrodigal	gene	2355584	2356039	.	-	.	ID=GCA000010485_02309_gene;locus_tag=GCA000010485_02309;gene=yfbV
contig_1	Pyrodigal	CDS	2355584	2356039	.	-	0	ID=GCA000010485_02309;Name=terminus macrodomain insulation protein YfbV;locus_tag=GCA000010485_02309;product=terminus macrodomain insulation protein YfbV;Dbxref=GO:0005886;gene=yfbV;Parent=GCA000010485_02309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3092,COG:S,KEGG:K09899,RefSeq:WP_000106627.1,SO:0001217,UniParc:UPI000013ADEC,UniRef:UniRef100_P0A8D9,UniRef:UniRef50_P0A8D9,UniRef:UniRef90_P0A8D9
contig_1	Pyrodigal	gene	2356377	2357579	.	+	.	ID=GCA000010485_02310_gene;locus_tag=GCA000010485_02310;gene=ackA
contig_1	Pyrodigal	CDS	2356377	2357579	.	+	0	ID=GCA000010485_02310;Name=acetate kinase;locus_tag=GCA000010485_02310;product=acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0006083,GO:0006085,GO:0008270,GO:0008776,GO:0016020,GO:0019413,GO:0019542,GO:0044011;gene=ackA;Parent=GCA000010485_02310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000095689,COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_000095707.1,SO:0001217,UniParc:UPI00000480B9,UniRef:UniRef100_P0A6A3,UniRef:UniRef50_P63411,UniRef:UniRef90_P63411;ec_number=2.7.2.15
contig_1	Pyrodigal	gene	2357654	2359798	.	+	.	ID=GCA000010485_02311_gene;locus_tag=GCA000010485_02311;gene=pta
contig_1	Pyrodigal	CDS	2357654	2359798	.	+	0	ID=GCA000010485_02311;Name=phosphate acetyltransferase;locus_tag=GCA000010485_02311;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006085,GO:0008959,GO:0016407;gene=pta;Parent=GCA000010485_02311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0857,COG:R,RefSeq:WP_000086698.1,SO:0001217,UniParc:UPI0001C22BA1,UniRef:UniRef100_UPI0001C22BA1,UniRef:UniRef50_P0A9M8,UniRef:UniRef90_P0A9M8;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	2360030	2361508	.	+	.	ID=GCA000010485_02312_gene;locus_tag=GCA000010485_02312;gene=yfcC
contig_1	Pyrodigal	CDS	2360030	2361508	.	+	0	ID=GCA000010485_02312;Name=putative basic amino acid antiporter YfcC;locus_tag=GCA000010485_02312;product=putative basic amino acid antiporter YfcC;Dbxref=GO:0005886,GO:0015297,GO:0016020;gene=yfcC;Parent=GCA000010485_02312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,SO:0001217,UniParc:UPI00005EF442,UniRef:UniRef100_E2QPF9,UniRef:UniRef50_P39263,UniRef:UniRef90_P39263
contig_1	Pyrodigal	gene	2361541	2362083	.	-	.	ID=GCA000010485_02313_gene;locus_tag=GCA000010485_02313;gene=yfcD
contig_1	Pyrodigal	CDS	2361541	2362083	.	-	0	ID=GCA000010485_02313;Name=NUDIX hydrolase YfcD;locus_tag=GCA000010485_02313;product=NUDIX hydrolase YfcD;Dbxref=GO:0016817,GO:0046872;gene=yfcD;Parent=GCA000010485_02313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1443,COG:I,RefSeq:WP_000437935.1,SO:0001217,UniParc:UPI000013AE00,UniRef:UniRef100_P65556,UniRef:UniRef50_P65556,UniRef:UniRef90_P65556;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	2362141	2362692	.	-	.	ID=GCA000010485_02314_gene;locus_tag=GCA000010485_02314;gene=yfcE
contig_1	Pyrodigal	CDS	2362141	2362692	.	-	0	ID=GCA000010485_02314;Name=phosphodiesterase;locus_tag=GCA000010485_02314;product=phosphodiesterase;Dbxref=GO:0016787,GO:0046872;gene=yfcE;Parent=GCA000010485_02314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0622,COG:R,KEGG:K07095,RefSeq:WP_000772452.1,SO:0001217,UniParc:UPI00001B5123,UniRef:UniRef100_P67095,UniRef:UniRef50_P67095,UniRef:UniRef90_P67095;ec_number=3.1.4.-
contig_1	Pyrodigal	gene	2362748	2363392	.	-	.	ID=GCA000010485_02315_gene;locus_tag=GCA000010485_02315;gene=yfcF
contig_1	Pyrodigal	CDS	2362748	2363392	.	-	0	ID=GCA000010485_02315;Name=glutathione transferase;locus_tag=GCA000010485_02315;product=glutathione transferase;Dbxref=GO:0004364,GO:0004601,GO:0006559,GO:0006749,GO:0016034,GO:0042542;gene=yfcF;Parent=GCA000010485_02315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000042440.1,SO:0001217,UniParc:UPI000000E40A,UniRef:UniRef100_A0A023LIH4,UniRef:UniRef50_P77544,UniRef:UniRef90_P77544;ec_number=2.5.1.18
contig_1	Pyrodigal	gene	2363528	2364175	.	+	.	ID=GCA000010485_02316_gene;locus_tag=GCA000010485_02316;gene=yfcG
contig_1	Pyrodigal	CDS	2363528	2364175	.	+	0	ID=GCA000010485_02316;Name=GSH-dependent disulfide bond oxidoreductase;locus_tag=GCA000010485_02316;product=GSH-dependent disulfide bond oxidoreductase;Dbxref=GO:0004364,GO:0004601,GO:0005737,GO:0006979,GO:0015036,GO:0042803;gene=yfcG;Parent=GCA000010485_02316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_000566494.1,SO:0001217,UniParc:UPI0001C22BA2,UniRef:UniRef100_A0A066T0H8,UniRef:UniRef50_P77526,UniRef:UniRef90_P77526;ec_number=1.8.4.-
contig_1	Pyrodigal	gene	2364232	2364594	.	+	.	ID=GCA000010485_02317_gene;locus_tag=GCA000010485_02317;gene=folX
contig_1	Pyrodigal	CDS	2364232	2364594	.	+	0	ID=GCA000010485_02317;Name=dihydroneopterin triphosphate 2'-epimerase;locus_tag=GCA000010485_02317;product=dihydroneopterin triphosphate 2'-epimerase;Dbxref=GO:0004150,GO:0006760;gene=folX;Parent=GCA000010485_02317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_000068458.1,SO:0001217,UniParc:UPI0001C22BA3,UniRef:UniRef100_A0A061YEK6,UniRef:UniRef50_A0AA37SEK5,UniRef:UniRef90_A0A3E2A0C6;ec_number=5.1.99.7
contig_1	Pyrodigal	gene	2364615	2365508	.	+	.	ID=GCA000010485_02318_gene;locus_tag=GCA000010485_02318;gene=yfcH
contig_1	Pyrodigal	CDS	2364615	2365508	.	+	0	ID=GCA000010485_02318;Name=Epimerase family protein YfcH;locus_tag=GCA000010485_02318;product=Epimerase family protein YfcH;gene=yfcH;Parent=GCA000010485_02318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,RefSeq:WP_001028309.1,SO:0001217,UniParc:UPI0001C22BA4,UniRef:UniRef100_A0A066T8S6,UniRef:UniRef50_P77775,UniRef:UniRef90_P77775
contig_1	Pyrodigal	gene	2365667	2366440	.	-	.	ID=GCA000010485_02319_gene;locus_tag=GCA000010485_02319;gene=hisP
contig_1	Pyrodigal	CDS	2365667	2366440	.	-	0	ID=GCA000010485_02319;Name=histidine ABC transporter ATP-binding protein HisP;locus_tag=GCA000010485_02319;product=histidine ABC transporter ATP-binding protein HisP;Dbxref=GO:0005291,GO:0005524,GO:0015424,GO:0016020,GO:0016887,GO:0055052,GO:0089709,GO:0089718,GO:1903810;gene=hisP;Parent=GCA000010485_02319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4598,COG:E,KEGG:K10017,RefSeq:WP_001293592.1,SO:0001217,UniParc:UPI0001C22BA5,UniRef:UniRef100_A0A066T918,UniRef:UniRef50_P02915,UniRef:UniRef90_P07109;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	2366448	2367164	.	-	.	ID=GCA000010485_02320_gene;locus_tag=GCA000010485_02320;gene=hisM
contig_1	Pyrodigal	CDS	2366448	2367164	.	-	0	ID=GCA000010485_02320;Name=Histidine/lysine/arginine/ornithine transport system permease protein HisM;locus_tag=GCA000010485_02320;product=Histidine/lysine/arginine/ornithine transport system permease protein HisM;Dbxref=GO:0006865,GO:0022857,GO:0043190;gene=hisM;Parent=GCA000010485_02320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4160,COG:E,RefSeq:WP_000569958.1,SO:0001217,UniParc:UPI000012C8B8,UniRef:UniRef100_P0AEU3,UniRef:UniRef50_P0AEU3,UniRef:UniRef90_P0AEU3
contig_1	Pyrodigal	gene	2367161	2367847	.	-	.	ID=GCA000010485_02321_gene;locus_tag=GCA000010485_02321;gene=hisQ
contig_1	Pyrodigal	CDS	2367161	2367847	.	-	0	ID=GCA000010485_02321;Name=histidine ABC transporter permease HisQ;locus_tag=GCA000010485_02321;product=histidine ABC transporter permease HisQ;gene=hisQ;Parent=GCA000010485_02321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000965522,COG:COG4215,COG:E,KEGG:K10016,RefSeq:WP_000965530.1,SO:0001217,UniParc:UPI0001C22BA6,UniRef:UniRef100_A0A066T0I3,UniRef:UniRef50_P52094,UniRef:UniRef90_A0A1V2BRG3
contig_1	Pyrodigal	gene	2367937	2368719	.	-	.	ID=GCA000010485_02322_gene;locus_tag=GCA000010485_02322;gene=hisJ
contig_1	Pyrodigal	CDS	2367937	2368719	.	-	0	ID=GCA000010485_02322;Name=histidine ABC transporter substrate-binding protein HisJ;locus_tag=GCA000010485_02322;product=histidine ABC transporter substrate-binding protein HisJ;Dbxref=GO:0006865,GO:0030288;gene=hisJ;Parent=GCA000010485_02322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000737621.1,SO:0001217,UniParc:UPI000012C8B5,UniRef:UniRef100_P0AEU0,UniRef:UniRef50_P02910,UniRef:UniRef90_P02910;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	2368940	2369722	.	-	.	ID=GCA000010485_02323_gene;locus_tag=GCA000010485_02323;gene=argT
contig_1	Pyrodigal	CDS	2368940	2369722	.	-	0	ID=GCA000010485_02323;Name=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;locus_tag=GCA000010485_02323;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;Dbxref=GO:0006865,GO:0030288;gene=argT;Parent=GCA000010485_02323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000748258.1,SO:0001217,UniParc:UPI00005EF448,UniRef:UniRef100_A0A061L734,UniRef:UniRef50_P02911,UniRef:UniRef90_P02911
contig_1	Pyrodigal	gene	2369988	2370557	.	-	.	ID=GCA000010485_02324_gene;locus_tag=GCA000010485_02324;gene=ubiX
contig_1	Pyrodigal	CDS	2369988	2370557	.	-	0	ID=GCA000010485_02324;Name=flavin prenyltransferase UbiX;locus_tag=GCA000010485_02324;product=flavin prenyltransferase UbiX;Dbxref=GO:0006744,GO:0016831,GO:0106141,GO:0120232;gene=ubiX;Parent=GCA000010485_02324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825700,COG:COG0163,COG:H,KEGG:K03186,RefSeq:WP_000825701.1,SO:0001217,UniParc:UPI00005EF449,UniRef:UniRef100_E2QPH2,UniRef:UniRef50_P0AG03,UniRef:UniRef90_P0AG03;ec_number=2.5.1.129
contig_1	Pyrodigal	gene	2370652	2372169	.	-	.	ID=GCA000010485_02325_gene;locus_tag=GCA000010485_02325;gene=purF
contig_1	Pyrodigal	CDS	2370652	2372169	.	-	0	ID=GCA000010485_02325;Name=amidophosphoribosyltransferase;locus_tag=GCA000010485_02325;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0006189,GO:0009113;gene=purF;Parent=GCA000010485_02325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_000334229.1,SO:0001217,UniParc:UPI0001C22BA7,UniRef:UniRef100_A0A061YKW8,UniRef:UniRef50_P0AG16,UniRef:UniRef90_P0AG16;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	2372206	2372694	.	-	.	ID=GCA000010485_02326_gene;locus_tag=GCA000010485_02326;gene=cvpA
contig_1	Pyrodigal	CDS	2372206	2372694	.	-	0	ID=GCA000010485_02326;Name=colicin V production protein;locus_tag=GCA000010485_02326;product=colicin V production protein;Dbxref=GO:0005886,GO:0009403;gene=cvpA;Parent=GCA000010485_02326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_000262113.1,SO:0001217,UniParc:UPI00000DEE13,UniRef:UniRef100_A0A0J3VXR8,UniRef:UniRef50_P08550,UniRef:UniRef90_P08550
contig_1	Infernal	gene	2372911	2372981	.	-	.	ID=GCA000010485_02327_gene;locus_tag=GCA000010485_02327;gene=naRNA4
contig_1	Infernal	ncRNA	2372911	2372981	1.3e-10	-	.	ID=GCA000010485_02327;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02327;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02327_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	2373002	2373072	.	-	.	ID=GCA000010485_02328_gene;locus_tag=GCA000010485_02328;gene=naRNA4
contig_1	Infernal	ncRNA	2373002	2373072	7e-12	-	.	ID=GCA000010485_02328;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02328;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02328_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2373135	2373797	.	-	.	ID=GCA000010485_02329_gene;locus_tag=GCA000010485_02329;gene=dedD
contig_1	Pyrodigal	CDS	2373135	2373797	.	-	0	ID=GCA000010485_02329;Name=cell division protein DedD;locus_tag=GCA000010485_02329;product=cell division protein DedD;Dbxref=GO:0005886,GO:0008047,GO:0030428,GO:0032153,GO:0032506,GO:0042834;gene=dedD;Parent=GCA000010485_02329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3147,COG:D,RefSeq:WP_000157008.1,SO:0001217,UniParc:UPI0001C22BA9,UniRef:UniRef100_A0A061L2J9,UniRef:UniRef50_P09549,UniRef:UniRef90_P09549
contig_1	Pyrodigal	gene	2373787	2375055	.	-	.	ID=GCA000010485_02330_gene;locus_tag=GCA000010485_02330;gene=folC
contig_1	Pyrodigal	CDS	2373787	2375055	.	-	0	ID=GCA000010485_02330;Name=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;locus_tag=GCA000010485_02330;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;Dbxref=GO:0004326,GO:0005524,GO:0005737,GO:0006730,GO:0006761,GO:0008841,GO:0009257,GO:0009396,GO:0016874,GO:0046656,GO:0046872,GO:0046901,GO:0097216;gene=folC;Parent=GCA000010485_02330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_000584587.1,SO:0001217,UniParc:UPI0001C22BAA,UniRef:UniRef100_A0A066T8T7,UniRef:UniRef50_P08192,UniRef:UniRef90_P08192;ec_number=6.3.2.17
contig_1	Pyrodigal	gene	2375125	2376039	.	-	.	ID=GCA000010485_02331_gene;locus_tag=GCA000010485_02331;gene=accD
contig_1	Pyrodigal	CDS	2375125	2376039	.	-	0	ID=GCA000010485_02331;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA000010485_02331;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0008270,GO:0009317,GO:0009329,GO:0016743,GO:2001295;gene=accD;Parent=GCA000010485_02331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_000118404.1,SO:0001217,UniParc:UPI00001251B5,UniRef:UniRef100_P0A9Q5,UniRef:UniRef50_P0A9Q5,UniRef:UniRef90_P0A9Q5;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	2376195	2376854	.	-	.	ID=GCA000010485_02332_gene;locus_tag=GCA000010485_02332;gene=dedA
contig_1	Pyrodigal	CDS	2376195	2376854	.	-	0	ID=GCA000010485_02332;Name=DedA family protein;locus_tag=GCA000010485_02332;product=DedA family protein;gene=dedA;Parent=GCA000010485_02332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000364337.1,SO:0001217,UniParc:UPI00000DEE18,UniRef:UniRef100_E2QPH8,UniRef:UniRef90_P0ABP6
contig_1	Pyrodigal	gene	2376937	2377749	.	-	.	ID=GCA000010485_02333_gene;locus_tag=GCA000010485_02333;gene=truA
contig_1	Pyrodigal	CDS	2376937	2377749	.	-	0	ID=GCA000010485_02333;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000010485_02333;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000010485_02333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06173,RefSeq:WP_001283598.1,SO:0001217,UniParc:UPI00005EF44D,UniRef:UniRef100_A7ZPD3,UniRef:UniRef50_P07649,UniRef:UniRef90_P07649;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	2377749	2378762	.	-	.	ID=GCA000010485_02334_gene;locus_tag=GCA000010485_02334;gene=usg
contig_1	Pyrodigal	CDS	2377749	2378762	.	-	0	ID=GCA000010485_02334;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000010485_02334;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0005829,GO:0008652,GO:0016620,GO:0046983,GO:0051287;gene=usg;Parent=GCA000010485_02334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,RefSeq:WP_001289165.1,SO:0001217,UniParc:UPI00005AA8A2,UniRef:UniRef100_A0A066T4P2,UniRef:UniRef50_P08390,UniRef:UniRef90_P08390;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	2378828	2379964	.	-	.	ID=GCA000010485_02335_gene;locus_tag=GCA000010485_02335;gene=pdxB
contig_1	Pyrodigal	CDS	2378828	2379964	.	-	0	ID=GCA000010485_02335;Name=4-phosphoerythronate dehydrogenase PdxB;locus_tag=GCA000010485_02335;product=4-phosphoerythronate dehydrogenase PdxB;Dbxref=GO:0005829,GO:0008615,GO:0033711,GO:0036001,GO:0046983,GO:0051287;gene=pdxB;Parent=GCA000010485_02335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,KEGG:K03473,RefSeq:WP_000699128.1,SO:0001217,UniParc:UPI0001C22BAB,UniRef:UniRef100_A0A061YIH2,UniRef:UniRef50_P05459,UniRef:UniRef90_P05459;ec_number=1.1.1.290
contig_1	Pyrodigal	gene	2380063	2381058	.	+	.	ID=GCA000010485_02336_gene;locus_tag=GCA000010485_02336;gene=flk
contig_1	Pyrodigal	CDS	2380063	2381058	.	+	0	ID=GCA000010485_02336;Name=flagella biosynthesis regulator Flk;locus_tag=GCA000010485_02336;product=flagella biosynthesis regulator Flk;Dbxref=GO:0005886,GO:0010468,GO:0016020;gene=flk;Parent=GCA000010485_02336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000615816.1,SO:0001217,UniParc:UPI00005EF450,UniRef:UniRef100_A0A0C5ED16,UniRef:UniRef50_P15286,UniRef:UniRef90_P15286
contig_1	Pyrodigal	gene	2381055	2382233	.	-	.	ID=GCA000010485_02337_gene;locus_tag=GCA000010485_02337;gene=yfcJ
contig_1	Pyrodigal	CDS	2381055	2382233	.	-	0	ID=GCA000010485_02337;Name=putative MFS-type transporter YfcJ;locus_tag=GCA000010485_02337;product=putative MFS-type transporter YfcJ;Dbxref=GO:0005886,GO:0022857;gene=yfcJ;Parent=GCA000010485_02337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000127789.1,SO:0001217,UniParc:UPI0001888B8C,UniRef:UniRef100_A0A061L512,UniRef:UniRef50_P77549,UniRef:UniRef90_P77549
contig_1	Pyrodigal	gene	2382498	2383718	.	-	.	ID=GCA000010485_02338_gene;locus_tag=GCA000010485_02338;gene=fabB
contig_1	Pyrodigal	CDS	2382498	2383718	.	-	0	ID=GCA000010485_02338;Name=beta-ketoacyl-ACP synthase I;locus_tag=GCA000010485_02338;product=beta-ketoacyl-ACP synthase I;Dbxref=GO:0004315,GO:0005829,GO:0006633,GO:1903966;gene=fabB;Parent=GCA000010485_02338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_000817178.1,SO:0001217,UniParc:UPI0000036D1C,UniRef:UniRef100_P0A953,UniRef:UniRef50_P0A953,UniRef:UniRef90_P0A953;ec_number=2.3.1.41
contig_1	Pyrodigal	gene	2383877	2385883	.	+	.	ID=GCA000010485_02339_gene;locus_tag=GCA000010485_02339;gene=mnmC
contig_1	Pyrodigal	CDS	2383877	2385883	.	+	0	ID=GCA000010485_02339;Name=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;locus_tag=GCA000010485_02339;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;Dbxref=GO:0002098,GO:0004808,GO:0005737,GO:0008033,GO:0016491,GO:0016645,GO:0032259,GO:0050660;gene=mnmC;Parent=GCA000010485_02339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4121,COG:J,RefSeq:WP_000683761.1,SO:0001217,UniParc:UPI0002185A58,UniRef:UniRef100_A0A066T8U8,UniRef:UniRef50_P77182,UniRef:UniRef90_P77182;ec_number=2.1.1.61
contig_1	Pyrodigal	gene	2386004	2386282	.	-	.	ID=GCA000010485_02340_gene;locus_tag=GCA000010485_02340;gene=yfcL
contig_1	Pyrodigal	CDS	2386004	2386282	.	-	0	ID=GCA000010485_02340;Name=putative protein YfcL;locus_tag=GCA000010485_02340;product=putative protein YfcL;Dbxref=GO:0005829;gene=yfcL;Parent=GCA000010485_02340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000559761.1,SO:0001217,UniParc:UPI00000DEE1D,UniRef:UniRef100_E2QPI6,UniRef:UniRef50_P64540,UniRef:UniRef90_P64540
contig_1	Pyrodigal	gene	2386316	2386864	.	-	.	ID=GCA000010485_02341_gene;locus_tag=GCA000010485_02341;gene=epmC
contig_1	Pyrodigal	CDS	2386316	2386864	.	-	0	ID=GCA000010485_02341;Name=elongation factor P hydroxylase;locus_tag=GCA000010485_02341;product=elongation factor P hydroxylase;Dbxref=GO:0004497,GO:0016709,GO:0043687,GO:0046872;gene=epmC;Parent=GCA000010485_02341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001089222,COG:COG3101,COG:J,KEGG:K09906,RefSeq:WP_001089235.1,SO:0001217,UniParc:UPI00005EEA6F,UniRef:UniRef100_J7R3F4,UniRef:UniRef50_P76938,UniRef:UniRef90_P76938;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2386864	2387673	.	-	.	ID=GCA000010485_02342_gene;locus_tag=GCA000010485_02342;gene=yfcA
contig_1	Pyrodigal	CDS	2386864	2387673	.	-	0	ID=GCA000010485_02342;Name=putative membrane transporter protein YfcA;locus_tag=GCA000010485_02342;product=putative membrane transporter protein YfcA;Dbxref=GO:0005886,GO:0009408;gene=yfcA;Parent=GCA000010485_02342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000447366.1,SO:0001217,UniParc:UPI00005EF453,UniRef:UniRef100_E2QPI8,UniRef:UniRef50_P0AD30,UniRef:UniRef90_P0AD30
contig_1	Pyrodigal	gene	2387673	2388497	.	-	.	ID=GCA000010485_02343_gene;locus_tag=GCA000010485_02343;gene=mepA
contig_1	Pyrodigal	CDS	2387673	2388497	.	-	0	ID=GCA000010485_02343;Name=penicillin-insensitive murein endopeptidase;locus_tag=GCA000010485_02343;product=penicillin-insensitive murein endopeptidase;Dbxref=GO:0000270,GO:0004222,GO:0004252,GO:0006508,GO:0030288,GO:0046872;gene=mepA;Parent=GCA000010485_02343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3770,COG:M,KEGG:K07261,RefSeq:WP_001043794.1,SO:0001217,UniParc:UPI0001C22BAD,UniRef:UniRef100_A0A7I0L059,UniRef:UniRef50_P0C0T5,UniRef:UniRef90_P0C0T5;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	2388501	2389586	.	-	.	ID=GCA000010485_02344_gene;locus_tag=GCA000010485_02344;gene=aroC
contig_1	Pyrodigal	CDS	2388501	2389586	.	-	0	ID=GCA000010485_02344;Name=chorismate synthase;locus_tag=GCA000010485_02344;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA000010485_02344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_001296258.1,SO:0001217,UniParc:UPI0001C22BAE,UniRef:UniRef100_A0A066T8V4,UniRef:UniRef50_P12008,UniRef:UniRef90_P12008;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	2389621	2390553	.	-	.	ID=GCA000010485_02345_gene;locus_tag=GCA000010485_02345;gene=prmB
contig_1	Pyrodigal	CDS	2389621	2390553	.	-	0	ID=GCA000010485_02345;Name=50S ribosomal protein L3 N(5)-glutamine methyltransferase;locus_tag=GCA000010485_02345;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0005829,GO:0008276,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0042273;gene=prmB;Parent=GCA000010485_02345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K07320,RefSeq:WP_001296259.1,SO:0001217,UniParc:UPI00005EF455,UniRef:UniRef100_A0A067HDY1,UniRef:UniRef50_P39199,UniRef:UniRef90_P39199;ec_number=2.1.1.298
contig_1	Pyrodigal	gene	2390719	2391270	.	+	.	ID=GCA000010485_02346_gene;locus_tag=GCA000010485_02346;gene=smrB
contig_1	Pyrodigal	CDS	2390719	2391270	.	+	0	ID=GCA000010485_02346;Name=endonuclease SmrB;locus_tag=GCA000010485_02346;product=endonuclease SmrB;Dbxref=GO:0004519,GO:0019843;gene=smrB;Parent=GCA000010485_02346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2840,COG:JL,RefSeq:WP_000730806.1,SO:0001217,UniParc:UPI000013AE13,UniRef:UniRef100_P0A8B2,UniRef:UniRef50_P0A8B2,UniRef:UniRef90_P0A8B2;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2391330	2392154	.	-	.	ID=GCA000010485_02347_gene;locus_tag=GCA000010485_02347
contig_1	Pyrodigal	CDS	2391330	2392154	.	-	0	ID=GCA000010485_02347;Name=DUF2544 domain-containing protein;locus_tag=GCA000010485_02347;product=DUF2544 domain-containing protein;Parent=GCA000010485_02347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001527383.1,SO:0001217,UniParc:UPI0001E8BBDB,UniRef:UniRef100_A0A061YKY1,UniRef:UniRef50_P76498,UniRef:UniRef90_A0A061YKY1
contig_1	Pyrodigal	gene	2392156	2392683	.	-	.	ID=GCA000010485_02348_gene;locus_tag=GCA000010485_02348
contig_1	Pyrodigal	CDS	2392156	2392683	.	-	0	ID=GCA000010485_02348;Name=Fimbrial protein;locus_tag=GCA000010485_02348;product=Fimbrial protein;Parent=GCA000010485_02348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000054000.1,SO:0001217,UniParc:UPI0001C22BB0,UniRef:UniRef100_A0A061L391,UniRef:UniRef50_Q6KCX9,UniRef:UniRef90_A0A061L391
contig_1	Pyrodigal	gene	2392680	2393159	.	-	.	ID=GCA000010485_02349_gene;locus_tag=GCA000010485_02349
contig_1	Pyrodigal	CDS	2392680	2393159	.	-	0	ID=GCA000010485_02349;Name=Fimbrial protein;locus_tag=GCA000010485_02349;product=Fimbrial protein;Parent=GCA000010485_02349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000819141.1,SO:0001217,UniParc:UPI0001C22BB1,UniRef:UniRef100_A0A3K3NC33,UniRef:UniRef50_P76500,UniRef:UniRef90_A0A3K3NC33
contig_1	Pyrodigal	gene	2393156	2393647	.	-	.	ID=GCA000010485_02350_gene;locus_tag=GCA000010485_02350
contig_1	Pyrodigal	CDS	2393156	2393647	.	-	0	ID=GCA000010485_02350;Name=Fimbrial protein;locus_tag=GCA000010485_02350;product=Fimbrial protein;Parent=GCA000010485_02350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000679363.1,SO:0001217,UniParc:UPI0001C22BB2,UniRef:UniRef100_A0A061L716,UniRef:UniRef50_W1X2A4,UniRef:UniRef90_A0A061L716
contig_1	Pyrodigal	gene	2393664	2394416	.	-	.	ID=GCA000010485_02351_gene;locus_tag=GCA000010485_02351
contig_1	Pyrodigal	CDS	2393664	2394416	.	-	0	ID=GCA000010485_02351;Name=Fimbria/pilus periplasmic chaperone;locus_tag=GCA000010485_02351;product=Fimbria/pilus periplasmic chaperone;Parent=GCA000010485_02351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12519,RefSeq:WP_000499462.1,SO:0001217,UniParc:UPI0001C22BB3,UniRef:UniRef100_A0A061YM01,UniRef:UniRef50_P77599,UniRef:UniRef90_Q6KCX6
contig_1	Pyrodigal	gene	2394436	2397084	.	-	.	ID=GCA000010485_02352_gene;locus_tag=GCA000010485_02352
contig_1	Pyrodigal	CDS	2394436	2397084	.	-	0	ID=GCA000010485_02352;Name=Export usher protein;locus_tag=GCA000010485_02352;product=Export usher protein;Parent=GCA000010485_02352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12518,RefSeq:WP_012896822.1,SO:0001217,UniParc:UPI0001C22BB4,UniRef:UniRef100_UPI0001C22BB4,UniRef:UniRef50_P77196,UniRef:UniRef90_B7MGA1
contig_1	Pyrodigal	gene	2397165	2397731	.	-	.	ID=GCA000010485_02353_gene;locus_tag=GCA000010485_02353
contig_1	Pyrodigal	CDS	2397165	2397731	.	-	0	ID=GCA000010485_02353;Name=Fimbrial-like adhesin exported protein;locus_tag=GCA000010485_02353;product=Fimbrial-like adhesin exported protein;Parent=GCA000010485_02353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000032632.1,SO:0001217,UniParc:UPI0001C22BB5,UniRef:UniRef100_A0A061L386,UniRef:UniRef50_P77288,UniRef:UniRef90_B7MY15
contig_1	Pyrodigal	gene	2398290	2398775	.	-	.	ID=GCA000010485_02354_gene;locus_tag=GCA000010485_02354;gene=sixA
contig_1	Pyrodigal	CDS	2398290	2398775	.	-	0	ID=GCA000010485_02354;Name=phosphohistidine phosphatase SixA;locus_tag=GCA000010485_02354;product=phosphohistidine phosphatase SixA;Dbxref=GO:0005737,GO:0036211,GO:0070297,GO:0101006;gene=sixA;Parent=GCA000010485_02354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2062,COG:T,RefSeq:WP_001195810.1,SO:0001217,UniParc:UPI0001C22BB6,UniRef:UniRef100_A0A061YBN5,UniRef:UniRef50_P76502,UniRef:UniRef90_P76502;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	2398978	2401122	.	-	.	ID=GCA000010485_02355_gene;locus_tag=GCA000010485_02355;gene=fadJ
contig_1	Pyrodigal	CDS	2398978	2401122	.	-	0	ID=GCA000010485_02355;Name=fatty acid oxidation complex subunit alpha FadJ;locus_tag=GCA000010485_02355;product=fatty acid oxidation complex subunit alpha FadJ;Dbxref=GO:0003857,GO:0004300,GO:0005737,GO:0006635,GO:0008692,GO:0009062,GO:0016509,GO:0051287,GO:0070403;gene=fadJ;Parent=GCA000010485_02355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1250,COG:I,RefSeq:WP_000425017.1,SO:0001217,UniParc:UPI0001C22BB7,UniRef:UniRef100_A0A066T0U2,UniRef:UniRef50_P77399,UniRef:UniRef90_P77399
contig_1	Pyrodigal	gene	2401122	2402432	.	-	.	ID=GCA000010485_02356_gene;locus_tag=GCA000010485_02356;gene=fadI
contig_1	Pyrodigal	CDS	2401122	2402432	.	-	0	ID=GCA000010485_02356;Name=acetyl-CoA C-acyltransferase FadI;locus_tag=GCA000010485_02356;product=acetyl-CoA C-acyltransferase FadI;Dbxref=GO:0003988,GO:0005737,GO:0005829,GO:0006631,GO:0006635,GO:0016042;gene=fadI;Parent=GCA000010485_02356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_000531977.1,SO:0001217,UniParc:UPI00005EFBE0,UniRef:UniRef100_B7MGV8,UniRef:UniRef50_P76503,UniRef:UniRef90_P76503;ec_number=2.3.1.16
contig_1	Pyrodigal	gene	2402613	2402897	.	-	.	ID=GCA000010485_02357_gene;locus_tag=GCA000010485_02357;gene=yfcZ
contig_1	Pyrodigal	CDS	2402613	2402897	.	-	0	ID=GCA000010485_02357;Name=UPF0381 protein YfcZ;locus_tag=GCA000010485_02357;product=UPF0381 protein YfcZ;Dbxref=GO:0005829;gene=yfcZ;Parent=GCA000010485_02357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3691,COG:S,RefSeq:WP_001296261.1,SO:0001217,UniParc:UPI000013AE1D,UniRef:UniRef100_P0AD33,UniRef:UniRef50_P0AD33,UniRef:UniRef90_P0AD33
contig_1	Pyrodigal	gene	2403269	2404609	.	+	.	ID=GCA000010485_02358_gene;locus_tag=GCA000010485_02358;gene=fadL
contig_1	Pyrodigal	CDS	2403269	2404609	.	+	0	ID=GCA000010485_02358;Name=long-chain fatty acid transporter FadL;locus_tag=GCA000010485_02358;product=long-chain fatty acid transporter FadL;Dbxref=GO:0009279,GO:0015483;gene=fadL;Parent=GCA000010485_02358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06076,RefSeq:WP_001296262.1,SO:0001217,UniParc:UPI0002185781,UniRef:UniRef100_A0A061L383,UniRef:UniRef50_P10384,UniRef:UniRef90_Q8CVU7
contig_1	Pyrodigal	gene	2404671	2405426	.	-	.	ID=GCA000010485_02359_gene;locus_tag=GCA000010485_02359;gene=mlaA
contig_1	Pyrodigal	CDS	2404671	2405426	.	-	0	ID=GCA000010485_02359;Name=phospholipid-binding lipoprotein MlaA;locus_tag=GCA000010485_02359;product=phospholipid-binding lipoprotein MlaA;Dbxref=GO:0009279,GO:0016020,GO:0120010;gene=mlaA;Parent=GCA000010485_02359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2853,COG:M,KEGG:K04754,RefSeq:WP_000776774.1,SO:0001217,UniParc:UPI00000E4A44,UniRef:UniRef100_Q6KCW9,UniRef:UniRef50_P76506,UniRef:UniRef90_P76506
contig_1	Pyrodigal	gene	2405720	2406652	.	+	.	ID=GCA000010485_02360_gene;locus_tag=GCA000010485_02360;gene=yfdC
contig_1	Pyrodigal	CDS	2405720	2406652	.	+	0	ID=GCA000010485_02360;Name=Inner membrane protein YfdC;locus_tag=GCA000010485_02360;product=Inner membrane protein YfdC;Dbxref=GO:0005886,GO:0015499,GO:0015724;gene=yfdC;Parent=GCA000010485_02360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,KEGG:K21990,RefSeq:WP_000368123.1,SO:0001217,UniParc:UPI0000D50ACF,UniRef:UniRef100_A0A061YDF8,UniRef:UniRef50_P37327,UniRef:UniRef90_P37327
contig_1	tRNAscan-SE	gene	2406728	2406802	.	+	.	ID=GCA000010485_02361_gene;locus_tag=GCA000010485_02361;gene=trnR
contig_1	tRNAscan-SE	tRNA	2406728	2406802	.	+	.	ID=GCA000010485_02361;Name=tRNA-Arg(cct);locus_tag=GCA000010485_02361;product=tRNA-Arg(cct);gene=trnR;anti_codon=cct;amino_acid=Arg;Parent=GCA000010485_02361_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	2406963	2408138	.	+	.	ID=GCA000010485_02362_gene;locus_tag=GCA000010485_02362
contig_1	Pyrodigal	CDS	2406963	2408138	.	+	0	ID=GCA000010485_02362;Name=Prophage CPS-53 integrase;locus_tag=GCA000010485_02362;product=Prophage CPS-53 integrase;Parent=GCA000010485_02362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000926944.1,SO:0001217,UniParc:UPI0001C22BB9,UniRef:UniRef100_A0A066T4S2,UniRef:UniRef50_A0A8S5PEN1,UniRef:UniRef90_A0A9N8CSD4
contig_1	Pyrodigal	gene	2408118	2409068	.	-	.	ID=GCA000010485_02363_gene;locus_tag=GCA000010485_02363
contig_1	Pyrodigal	CDS	2408118	2409068	.	-	0	ID=GCA000010485_02363;Name=Sce7725 family protein;locus_tag=GCA000010485_02363;product=Sce7725 family protein;Parent=GCA000010485_02363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000287253.1,SO:0001217,UniParc:UPI0001C22BBA,UniRef:UniRef100_A0A066T8X6,UniRef:UniRef50_A0A0G4JY91,UniRef:UniRef90_A0AAD1TTT2
contig_1	Pyrodigal	gene	2409090	2409971	.	-	.	ID=GCA000010485_02364_gene;locus_tag=GCA000010485_02364
contig_1	Pyrodigal	CDS	2409090	2409971	.	-	0	ID=GCA000010485_02364;Name=Sce7726 family protein;locus_tag=GCA000010485_02364;product=Sce7726 family protein;Parent=GCA000010485_02364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000019149.1,SO:0001217,UniParc:UPI0001C22BBB,UniRef:UniRef100_A0A066T964,UniRef:UniRef50_A0A0U1QU37,UniRef:UniRef90_A0AAD1TQH2
contig_1	Pyrodigal	gene	2410651	2410923	.	-	.	ID=GCA000010485_02365_gene;locus_tag=GCA000010485_02365
contig_1	Pyrodigal	CDS	2410651	2410923	.	-	0	ID=GCA000010485_02365;Name=Ogr/Delta-like zinc finger family protein;locus_tag=GCA000010485_02365;product=Ogr/Delta-like zinc finger family protein;Parent=GCA000010485_02365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000783295.1,SO:0001217,UniParc:UPI00016A1464,UniRef:UniRef100_A0A0A2S225,UniRef:UniRef50_A0A0A2S225,UniRef:UniRef90_A0A0A2S225
contig_1	Pyrodigal	gene	2411206	2413893	.	-	.	ID=GCA000010485_02366_gene;locus_tag=GCA000010485_02366
contig_1	Pyrodigal	CDS	2411206	2413893	.	-	0	ID=GCA000010485_02366;Name=DUF927 domain-containing protein;locus_tag=GCA000010485_02366;product=DUF927 domain-containing protein;Parent=GCA000010485_02366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000856856.1,SO:0001217,UniParc:UPI0001C22BBC,UniRef:UniRef100_A0A066T0M5,UniRef:UniRef50_A0A6P1PZ11,UniRef:UniRef90_A0A603N1Q5
contig_1	Pyrodigal	gene	2413890	2414300	.	-	.	ID=GCA000010485_02367_gene;locus_tag=GCA000010485_02367
contig_1	Pyrodigal	CDS	2413890	2414300	.	-	0	ID=GCA000010485_02367;Name=DUF5375 domain-containing protein;locus_tag=GCA000010485_02367;product=DUF5375 domain-containing protein;Parent=GCA000010485_02367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001063904.1,SO:0001217,UniParc:UPI0001C22BBD,UniRef:UniRef100_A0A061L704,UniRef:UniRef50_A0AA44SLW8,UniRef:UniRef90_A0A0J1LLE3
contig_1	Pyrodigal	gene	2414293	2414529	.	-	.	ID=GCA000010485_02368_gene;locus_tag=GCA000010485_02368
contig_1	Pyrodigal	CDS	2414293	2414529	.	-	0	ID=GCA000010485_02368;Name=Phage protein;locus_tag=GCA000010485_02368;product=Phage protein;Parent=GCA000010485_02368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000839713.1,SO:0001217,UniParc:UPI0002185782,UniRef:UniRef100_A0A061L7M8,UniRef:UniRef50_A0AA37EPW8,UniRef:UniRef90_A0AAD1X0V8
contig_1	Pyrodigal	gene	2414526	2415116	.	-	.	ID=GCA000010485_02369_gene;locus_tag=GCA000010485_02369
contig_1	Pyrodigal	CDS	2414526	2415116	.	-	0	ID=GCA000010485_02369;Name=Host cell division inhibitor Icd-like protein;locus_tag=GCA000010485_02369;product=Host cell division inhibitor Icd-like protein;Parent=GCA000010485_02369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001111085.1,SO:0001217,UniParc:UPI0002A393AC,UniRef:UniRef100_A0A1U9TRW2,UniRef:UniRef50_A0AAD1X200,UniRef:UniRef90_A0AAD1X200
contig_1	Infernal	gene	2414784	2414871	.	-	.	ID=GCA000010485_02370_gene;locus_tag=GCA000010485_02370;gene=C4
contig_1	Infernal	ncRNA	2414784	2414871	2.4e-13	-	.	ID=GCA000010485_02370;Name=C4 antisense RNA;locus_tag=GCA000010485_02370;product=C4 antisense RNA;Dbxref=RFAM:RF01695;Parent=GCA000010485_02370_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF01695
contig_1	Infernal	gene	2414952	2415029	.	-	.	ID=GCA000010485_02371_gene;locus_tag=GCA000010485_02371;gene=isrK
contig_1	Infernal	ncRNA	2414952	2415029	1.5e-10	-	.	ID=GCA000010485_02371;Name=isrK Hfq binding RNA;locus_tag=GCA000010485_02371;gene=isrK;product=isrK Hfq binding RNA;Dbxref=RFAM:RF01394;Parent=GCA000010485_02371_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01394
contig_1	Pyrodigal	gene	2415204	2416208	.	-	.	ID=GCA000010485_02372_gene;locus_tag=GCA000010485_02372
contig_1	Pyrodigal	CDS	2415204	2416208	.	-	0	ID=GCA000010485_02372;Name=P2 family phage major capsid protein;locus_tag=GCA000010485_02372;product=P2 family phage major capsid protein;Parent=GCA000010485_02372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000270796.1,SO:0001217,UniParc:UPI0001C22BBF,UniRef:UniRef100_A0A066T0U8,UniRef:UniRef50_A7MN35,UniRef:UniRef90_A0AAD1X250
contig_1	Pyrodigal	gene	2416231	2417091	.	-	.	ID=GCA000010485_02373_gene;locus_tag=GCA000010485_02373
contig_1	Pyrodigal	CDS	2416231	2417091	.	-	0	ID=GCA000010485_02373;Name=hypothetical protein;locus_tag=GCA000010485_02373;product=hypothetical protein;Parent=GCA000010485_02373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000228221.1,SO:0001217,UniParc:UPI0001C22BC0,UniRef:UniRef100_A0A066T0M9,UniRef:UniRef50_R8WYP2,UniRef:UniRef90_A0A3K0N7B9
contig_1	Pyrodigal	gene	2417109	2417336	.	-	.	ID=GCA000010485_02374_gene;locus_tag=GCA000010485_02374;gene=alpA
contig_1	Pyrodigal	CDS	2417109	2417336	.	-	0	ID=GCA000010485_02374;Name=AlpA family phage regulatory protein;locus_tag=GCA000010485_02374;product=AlpA family phage regulatory protein;gene=alpA;Parent=GCA000010485_02374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000055089.1,SO:0001217,UniParc:UPI0001C22BC1,UniRef:UniRef100_A0A0C2BAG4,UniRef:UniRef50_A0A455W3K7,UniRef:UniRef90_A0A0C2BAG4
contig_1	Pyrodigal	gene	2417916	2418851	.	-	.	ID=GCA000010485_02375_gene;locus_tag=GCA000010485_02375;gene=dsdC
contig_1	Pyrodigal	CDS	2417916	2418851	.	-	0	ID=GCA000010485_02375;Name=DNA-binding transcriptional regulator DsdC;locus_tag=GCA000010485_02375;product=DNA-binding transcriptional regulator DsdC;Dbxref=GO:0003700,GO:0006355;gene=dsdC;Parent=GCA000010485_02375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K13636,RefSeq:WP_001296270.1,SO:0001217,UniParc:UPI0001C22BC2,UniRef:UniRef100_A0A066T0X8,UniRef:UniRef50_P46068,UniRef:UniRef90_A8ACI5
contig_1	Pyrodigal	gene	2419069	2420406	.	+	.	ID=GCA000010485_02376_gene;locus_tag=GCA000010485_02376;gene=dsdX
contig_1	Pyrodigal	CDS	2419069	2420406	.	+	0	ID=GCA000010485_02376;Name=D-serine transporter DsdX;locus_tag=GCA000010485_02376;product=D-serine transporter DsdX;Dbxref=GO:0005886,GO:0015128,GO:0016020,GO:0035429;gene=dsdX;Parent=GCA000010485_02376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,KEGG:K13629,RefSeq:WP_000556035.1,SO:0001217,UniParc:UPI0000D50AFF,UniRef:UniRef100_A0A061YII5,UniRef:UniRef50_A0A0H2VAP9,UniRef:UniRef90_A0A0H2VAP9
contig_1	Pyrodigal	gene	2420424	2421752	.	+	.	ID=GCA000010485_02377_gene;locus_tag=GCA000010485_02377;gene=dsdA
contig_1	Pyrodigal	CDS	2420424	2421752	.	+	0	ID=GCA000010485_02377;Name=D-serine ammonia-lyase;locus_tag=GCA000010485_02377;product=D-serine ammonia-lyase;Dbxref=GO:0008721,GO:0030170,GO:0046416;gene=dsdA;Parent=GCA000010485_02377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01753,RefSeq:WP_000426446.1,SO:0001217,UniParc:UPI0001C22BC3,UniRef:UniRef100_A0A061L375,UniRef:UniRef50_P00926,UniRef:UniRef90_A0A061L375;ec_number=4.3.1.18
contig_1	Pyrodigal	gene	2421860	2423398	.	-	.	ID=GCA000010485_02378_gene;locus_tag=GCA000010485_02378;gene=emrY
contig_1	Pyrodigal	CDS	2421860	2423398	.	-	0	ID=GCA000010485_02378;Name=multidrug efflux MFS transporter permease subunit EmrY;locus_tag=GCA000010485_02378;product=multidrug efflux MFS transporter permease subunit EmrY;Dbxref=GO:0005886,GO:0006974,GO:0015721,GO:0022857,GO:0046677,GO:0055085,GO:0098567,GO:0140330,GO:1990281,GO:1990961;gene=emrY;Parent=GCA000010485_02378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001018714,COG:COG2814,COG:G,KEGG:K07786,RefSeq:WP_001018723.1,SO:0001217,UniParc:UPI00000DEE2D,UniRef:UniRef100_A0A061LQD7,UniRef:UniRef50_P52600,UniRef:UniRef90_P52600
contig_1	Pyrodigal	gene	2423398	2424561	.	-	.	ID=GCA000010485_02379_gene;locus_tag=GCA000010485_02379;gene=emrK
contig_1	Pyrodigal	CDS	2423398	2424561	.	-	0	ID=GCA000010485_02379;Name=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;locus_tag=GCA000010485_02379;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;Dbxref=GO:0006974,GO:0015721,GO:0042910,GO:0046677,GO:0098567,GO:0140330,GO:1990281,GO:1990961;gene=emrK;Parent=GCA000010485_02379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000435167,COG:COG1566,COG:V,KEGG:K07797,RefSeq:WP_000435158.1,SO:0001217,UniParc:UPI0001C22BC4,UniRef:UniRef100_A0A066SZJ8,UniRef:UniRef50_P52599,UniRef:UniRef90_P52599
contig_1	Bakta	gene	2424951	2424980	.	+	.	ID=GCA000010485_02380_gene;locus_tag=GCA000010485_02380;inference=ab initio prediction:Bakta;gene=evgL
contig_1	Bakta	CDS	2424951	2424980	.	+	0	ID=GCA000010485_02380;Name=Protein EvgL;locus_tag=GCA000010485_02380;product=Protein EvgL;gene=evgL;Parent=GCA000010485_02380_gene;Note=RefSeq:WP_211180503.1,SO:0001217,UniParc:UPI00107E63D8,UniRef:UniRef100_P0DSF9
contig_1	Pyrodigal	gene	2424977	2425591	.	+	.	ID=GCA000010485_02381_gene;locus_tag=GCA000010485_02381;gene=evgA
contig_1	Pyrodigal	CDS	2424977	2425591	.	+	0	ID=GCA000010485_02381;Name=acid-sensing system DNA-binding response regulator EvgA;locus_tag=GCA000010485_02381;product=acid-sensing system DNA-binding response regulator EvgA;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=evgA;Parent=GCA000010485_02381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_000991370.1,SO:0001217,UniParc:UPI000012A2A6,UniRef:UniRef100_P0ACZ4,UniRef:UniRef50_P0ACZ4,UniRef:UniRef90_P0ACZ4
contig_1	Pyrodigal	gene	2425596	2429189	.	+	.	ID=GCA000010485_02382_gene;locus_tag=GCA000010485_02382;gene=evgS
contig_1	Pyrodigal	CDS	2425596	2429189	.	+	0	ID=GCA000010485_02382;Name=acid-sensing system histidine kinase EvgS;locus_tag=GCA000010485_02382;product=acid-sensing system histidine kinase EvgS;Dbxref=GO:0000155,GO:0004673,GO:0005524,GO:0005829,GO:0005886,GO:0007165,GO:0010038,GO:0010447,GO:0030288;gene=evgS;Parent=GCA000010485_02382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001301578,BlastRules:WP_001326970,COG:COG2198,COG:T,RefSeq:WP_001531852.1,SO:0001217,UniParc:UPI0001C22BC5,UniRef:UniRef100_A0A1U9TRX2,UniRef:UniRef50_P30855,UniRef:UniRef90_P30855;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2429245	2430390	.	-	.	ID=GCA000010485_02383_gene;locus_tag=GCA000010485_02383;gene=yfdE
contig_1	Pyrodigal	CDS	2429245	2430390	.	-	0	ID=GCA000010485_02383;Name=CoA:oxalate CoA-transferase;locus_tag=GCA000010485_02383;product=CoA:oxalate CoA-transferase;Dbxref=GO:0008410,GO:0036412,GO:0042803;gene=yfdE;Parent=GCA000010485_02383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1804,COG:I,RefSeq:WP_001296273.1,SO:0001217,UniParc:UPI000191E8B2,UniRef:UniRef100_E2QPL4,UniRef:UniRef50_P76518,UniRef:UniRef90_P76518;ec_number=2.8.3.19
contig_1	Pyrodigal	gene	2430464	2431408	.	-	.	ID=GCA000010485_02384_gene;locus_tag=GCA000010485_02384;gene=yfdV
contig_1	Pyrodigal	CDS	2430464	2431408	.	-	0	ID=GCA000010485_02384;Name=transporter YfdV;locus_tag=GCA000010485_02384;product=transporter YfdV;Dbxref=GO:0005886,GO:0055085;gene=yfdV;Parent=GCA000010485_02384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0679,COG:R,KEGG:K13936,RefSeq:WP_000955028.1,SO:0001217,UniParc:UPI000013AE2F,UniRef:UniRef100_P0AA49,UniRef:UniRef50_P0AA49,UniRef:UniRef90_P0AA49
contig_1	Pyrodigal	gene	2431478	2433172	.	-	.	ID=GCA000010485_02385_gene;locus_tag=GCA000010485_02385;gene=oxc
contig_1	Pyrodigal	CDS	2431478	2433172	.	-	0	ID=GCA000010485_02385;Name=oxalyl-CoA decarboxylase;locus_tag=GCA000010485_02385;product=oxalyl-CoA decarboxylase;Dbxref=GO:0000287,GO:0001561,GO:0008949,GO:0030976,GO:0033611,GO:0042802,GO:0043531,GO:0071468;gene=oxc;Parent=GCA000010485_02385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01577,RefSeq:WP_001283510.1,SO:0001217,UniParc:UPI0001C22BC6,UniRef:UniRef100_A0A061L6Z2,UniRef:UniRef50_P40149,UniRef:UniRef90_P0AFI0;ec_number=4.1.1.8
contig_1	Pyrodigal	gene	2433226	2434476	.	-	.	ID=GCA000010485_02386_gene;locus_tag=GCA000010485_02386;gene=frc
contig_1	Pyrodigal	CDS	2433226	2434476	.	-	0	ID=GCA000010485_02386;Name=formyl-CoA transferase;locus_tag=GCA000010485_02386;product=formyl-CoA transferase;Dbxref=GO:0033608,GO:0033611;gene=frc;Parent=GCA000010485_02386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1804,COG:I,RefSeq:WP_000106759.1,SO:0001217,UniParc:UPI000013AE30,UniRef:UniRef100_P69902,UniRef:UniRef50_O06644,UniRef:UniRef90_P69902;ec_number=2.8.3.16
contig_1	Pyrodigal	gene	2434988	2435620	.	-	.	ID=GCA000010485_02387_gene;locus_tag=GCA000010485_02387;gene=yfdX
contig_1	Pyrodigal	CDS	2434988	2435620	.	-	0	ID=GCA000010485_02387;Name=Protein YfdX;locus_tag=GCA000010485_02387;product=Protein YfdX;gene=yfdX;Parent=GCA000010485_02387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825598.1,SO:0001217,UniParc:UPI00000E4A46,UniRef:UniRef100_E2QPL8,UniRef:UniRef50_P76520,UniRef:UniRef90_P76520
contig_1	Pyrodigal	gene	2435915	2436190	.	+	.	ID=GCA000010485_02388_gene;locus_tag=GCA000010485_02388;gene=ypdI
contig_1	Pyrodigal	CDS	2435915	2436190	.	+	0	ID=GCA000010485_02388;Name=putative lipoprotein YpdI;locus_tag=GCA000010485_02388;product=putative lipoprotein YpdI;Dbxref=GO:0005886,GO:0009242;gene=ypdI;Parent=GCA000010485_02388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000867654.1,SO:0001217,UniParc:UPI00000E4A47,UniRef:UniRef100_E2QPL9,UniRef:UniRef50_O32528,UniRef:UniRef90_O32528
contig_1	Pyrodigal	gene	2436267	2436509	.	-	.	ID=GCA000010485_02389_gene;locus_tag=GCA000010485_02389
contig_1	Pyrodigal	CDS	2436267	2436509	.	-	0	ID=GCA000010485_02389;Name=DUF2545 domain-containing protein;locus_tag=GCA000010485_02389;product=DUF2545 domain-containing protein;Parent=GCA000010485_02389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000639875.1,SO:0001217,UniParc:UPI00000DEE34,UniRef:UniRef100_E2QPM0,UniRef:UniRef50_P76521,UniRef:UniRef90_J7R3I5
contig_1	Pyrodigal	gene	2436862	2437782	.	+	.	ID=GCA000010485_02390_gene;locus_tag=GCA000010485_02390;gene=lpxP
contig_1	Pyrodigal	CDS	2436862	2437782	.	+	0	ID=GCA000010485_02390;Name=kdo(2)-lipid IV(A) palmitoleoyltransferase;locus_tag=GCA000010485_02390;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;Dbxref=GO:0005886,GO:0008951,GO:0009103,GO:0009245,GO:0009409,GO:0016020,GO:0036104;gene=lpxP;Parent=GCA000010485_02390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1560,COG:I,KEGG:K12974,RefSeq:WP_000484018.1,SO:0001217,UniParc:UPI0001C22BC7,UniRef:UniRef100_A0A066T3M6,UniRef:UniRef50_P0ACV2,UniRef:UniRef90_P0ACV2;ec_number=2.3.1.242
contig_1	Bakta	gene	2438154	2438210	.	+	.	ID=GCA000010485_02391_gene;locus_tag=GCA000010485_02391;inference=ab initio prediction:Bakta;gene=ypdK
contig_1	Bakta	CDS	2438154	2438210	.	+	0	ID=GCA000010485_02391;Name=membrane protein YpdK;locus_tag=GCA000010485_02391;product=membrane protein YpdK;Dbxref=GO:0016020;gene=ypdK;Parent=GCA000010485_02391_gene;Note=RefSeq:WP_077818767.1,SO:0001217,UniParc:UPI000459F304,UniRef:UniRef100_W8SZQ6,UniRef:UniRef50_A0A090NLK7,UniRef:UniRef90_A0A090NLK7
contig_1	Pyrodigal	gene	2438275	2439513	.	-	.	ID=GCA000010485_02392_gene;locus_tag=GCA000010485_02392;gene=alaC
contig_1	Pyrodigal	CDS	2438275	2439513	.	-	0	ID=GCA000010485_02392;Name=alanine transaminase;locus_tag=GCA000010485_02392;product=alanine transaminase;Dbxref=GO:0003824,GO:0004021,GO:0005737,GO:0006523,GO:0008483,GO:0009058,GO:0019272,GO:0030170,GO:0030632,GO:0042803;gene=alaC;Parent=GCA000010485_02392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,KEGG:K14261,RefSeq:WP_000785931.1,SO:0001217,UniParc:UPI000013AE35,UniRef:UniRef100_P77434,UniRef:UniRef50_P77434,UniRef:UniRef90_P77434;ec_number=2.6.1.2
contig_1	Pyrodigal	gene	2439890	2441587	.	+	.	ID=GCA000010485_02393_gene;locus_tag=GCA000010485_02393;gene=ypdA
contig_1	Pyrodigal	CDS	2439890	2441587	.	+	0	ID=GCA000010485_02393;Name=two-component system sensor histidine kinase YpdA;locus_tag=GCA000010485_02393;product=two-component system sensor histidine kinase YpdA;Dbxref=GO:0000155,GO:0004673,GO:0005524,GO:0005886,GO:0007165,GO:0031670,GO:0071555;gene=ypdA;Parent=GCA000010485_02393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000544359,COG:COG3275,COG:T,KEGG:K27884,RefSeq:WP_000544377.1,SO:0001217,UniParc:UPI00000DEE39,UniRef:UniRef100_E2QPM3,UniRef:UniRef50_P0AA93,UniRef:UniRef90_P0AA93;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2441602	2442336	.	+	.	ID=GCA000010485_02394_gene;locus_tag=GCA000010485_02394;gene=ypdB
contig_1	Pyrodigal	CDS	2441602	2442336	.	+	0	ID=GCA000010485_02394;Name=two-component system response regulator YpdB;locus_tag=GCA000010485_02394;product=two-component system response regulator YpdB;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=ypdB;Parent=GCA000010485_02394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295458,COG:COG3279,COG:KT,KEGG:K27885,RefSeq:WP_001295458.1,SO:0001217,UniParc:UPI000013BDAF,UniRef:UniRef100_P0AE39,UniRef:UniRef50_P0AE39,UniRef:UniRef90_P0AE39
contig_1	Pyrodigal	gene	2442349	2443206	.	+	.	ID=GCA000010485_02395_gene;locus_tag=GCA000010485_02395;gene=ypdC
contig_1	Pyrodigal	CDS	2442349	2443206	.	+	0	ID=GCA000010485_02395;Name=putative HTH-type transcriptional regulator YpdC;locus_tag=GCA000010485_02395;product=putative HTH-type transcriptional regulator YpdC;Dbxref=GO:0003700,GO:0043565;gene=ypdC;Parent=GCA000010485_02395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000646870.1,SO:0001217,UniParc:UPI0001C22BC8,UniRef:UniRef100_A0A066T3M1,UniRef:UniRef50_P77396,UniRef:UniRef90_P77396
contig_1	Pyrodigal	gene	2443209	2445704	.	-	.	ID=GCA000010485_02396_gene;locus_tag=GCA000010485_02396;gene=ypdE
contig_1	Pyrodigal	CDS	2443209	2445704	.	-	0	ID=GCA000010485_02396;Name=aminopeptidase;locus_tag=GCA000010485_02396;product=aminopeptidase;Dbxref=GO:0005737,GO:0008965,GO:0008982,GO:0009401,GO:0016020,GO:0016301,GO:0046872;gene=ypdE;Parent=GCA000010485_02396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23991,RefSeq:WP_000955882.1,SO:0001217,UniParc:UPI0001C22BC9,UniRef:UniRef100_A0A066SZI0,UniRef:UniRef50_P77439,UniRef:UniRef90_P77439;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	2445729	2446766	.	-	.	ID=GCA000010485_02397_gene;locus_tag=GCA000010485_02397;gene=ypdE
contig_1	Pyrodigal	CDS	2445729	2446766	.	-	0	ID=GCA000010485_02397;Name=aminopeptidase;locus_tag=GCA000010485_02397;product=aminopeptidase;Dbxref=GO:0004177,GO:0006508,GO:0008237,GO:0046872,GO:0070006;gene=ypdE;Parent=GCA000010485_02397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_000366073.1,SO:0001217,UniParc:UPI0001C22BCA,UniRef:UniRef100_A0A061YEQ7,UniRef:UniRef50_P77585,UniRef:UniRef90_P77585;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	2446766	2447851	.	-	.	ID=GCA000010485_02398_gene;locus_tag=GCA000010485_02398;gene=ypdF
contig_1	Pyrodigal	CDS	2446766	2447851	.	-	0	ID=GCA000010485_02398;Name=aminopeptidase;locus_tag=GCA000010485_02398;product=aminopeptidase;Dbxref=GO:0016787;gene=ypdF;Parent=GCA000010485_02398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08326,RefSeq:WP_000173255.1,SO:0001217,UniParc:UPI0001C22BCB,UniRef:UniRef100_A0A066T7Z1,UniRef:UniRef50_P76524,UniRef:UniRef90_A0A376W630;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	2447866	2449113	.	-	.	ID=GCA000010485_02399_gene;locus_tag=GCA000010485_02399;gene=fryC
contig_1	Pyrodigal	CDS	2447866	2449113	.	-	0	ID=GCA000010485_02399;Name=Fructose-like permease IIC component;locus_tag=GCA000010485_02399;product=Fructose-like permease IIC component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0090563;gene=fryC;Parent=GCA000010485_02399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985306.1,SO:0001217,UniParc:UPI00018876BC,UniRef:UniRef100_E2QPM9,UniRef:UniRef50_P77579,UniRef:UniRef90_P77579
contig_1	Pyrodigal	gene	2449135	2449461	.	-	.	ID=GCA000010485_02400_gene;locus_tag=GCA000010485_02400;gene=fryB
contig_1	Pyrodigal	CDS	2449135	2449461	.	-	0	ID=GCA000010485_02400;Name=PTS system fructose-like EIIB component 1;locus_tag=GCA000010485_02400;product=PTS system fructose-like EIIB component 1;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0022877,GO:0090582;gene=fryB;Parent=GCA000010485_02400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038456.1,SO:0001217,UniParc:UPI000013BDB6,UniRef:UniRef100_P69808,UniRef:UniRef50_P69808,UniRef:UniRef90_P69808;ec_number=2.7.1.202
contig_1	Pyrodigal	gene	2449680	2450645	.	-	.	ID=GCA000010485_02401_gene;locus_tag=GCA000010485_02401;gene=glk
contig_1	Pyrodigal	CDS	2449680	2450645	.	-	0	ID=GCA000010485_02401;Name=glucokinase;locus_tag=GCA000010485_02401;product=glucokinase;Dbxref=GO:0004340,GO:0005524,GO:0005536,GO:0005829,GO:0006096,GO:0051156;gene=glk;Parent=GCA000010485_02401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0837,COG:G,KEGG:K00845,RefSeq:WP_000170355.1,SO:0001217,UniParc:UPI00000DEE40,UniRef:UniRef100_B7UG97,UniRef:UniRef50_P0A6V8,UniRef:UniRef90_P0A6V8;ec_number=2.7.1.2
contig_1	Pyrodigal	gene	2450849	2452105	.	+	.	ID=GCA000010485_02402_gene;locus_tag=GCA000010485_02402;gene=yfeO
contig_1	Pyrodigal	CDS	2450849	2452105	.	+	0	ID=GCA000010485_02402;Name=ion channel protein;locus_tag=GCA000010485_02402;product=ion channel protein;Dbxref=GO:0005247,GO:0005886;gene=yfeO;Parent=GCA000010485_02402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000903138.1,SO:0001217,UniParc:UPI0001C22BCC,UniRef:UniRef100_A0A061L7K5,UniRef:UniRef50_P67729,UniRef:UniRef90_P67729
contig_1	Pyrodigal	gene	2452220	2452546	.	+	.	ID=GCA000010485_02403_gene;locus_tag=GCA000010485_02403;gene=ypeC
contig_1	Pyrodigal	CDS	2452220	2452546	.	+	0	ID=GCA000010485_02403;Name=putative protein YpeC;locus_tag=GCA000010485_02403;product=putative protein YpeC;gene=ypeC;Parent=GCA000010485_02403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000490072.1,SO:0001217,UniParc:UPI000013BDC6,UniRef:UniRef100_P64542,UniRef:UniRef50_P64542,UniRef:UniRef90_P64542
contig_1	Pyrodigal	gene	2452687	2453925	.	-	.	ID=GCA000010485_02404_gene;locus_tag=GCA000010485_02404;gene=mntH
contig_1	Pyrodigal	CDS	2452687	2453925	.	-	0	ID=GCA000010485_02404;Name=Mn(2+) uptake NRAMP transporter MntH;locus_tag=GCA000010485_02404;product=Mn(2+) uptake NRAMP transporter MntH;Dbxref=GO:0005384,GO:0005886,GO:0015086,GO:0015293,GO:0016020,GO:0022857,GO:0034755,GO:0046872,GO:0055085;gene=mntH;Parent=GCA000010485_02404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000131735,COG:COG1914,COG:P,RefSeq:WP_000186369.1,SO:0001217,UniParc:UPI000012F2B9,UniRef:UniRef100_P0A769,UniRef:UniRef50_P0A769,UniRef:UniRef90_P0A769
contig_1	Pyrodigal	gene	2454261	2455463	.	+	.	ID=GCA000010485_02405_gene;locus_tag=GCA000010485_02405;gene=nupC
contig_1	Pyrodigal	CDS	2454261	2455463	.	+	0	ID=GCA000010485_02405;Name=nucleoside permease NupC;locus_tag=GCA000010485_02405;product=nucleoside permease NupC;Dbxref=GO:0005886,GO:0015212,GO:0015213,GO:0015506,GO:1901642;gene=nupC;Parent=GCA000010485_02405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000376337,BlastRules:WP_003244143,COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_000376337.1,SO:0001217,UniParc:UPI0000130A2E,UniRef:UniRef100_P0AFF2,UniRef:UniRef50_P0AFF2,UniRef:UniRef90_P0AFF2
contig_1	Pyrodigal	gene	2455513	2457702	.	-	.	ID=GCA000010485_02406_gene;locus_tag=GCA000010485_02406
contig_1	Pyrodigal	CDS	2455513	2457702	.	-	0	ID=GCA000010485_02406;Name=Putative diguanylate cyclase;locus_tag=GCA000010485_02406;product=Putative diguanylate cyclase;Parent=GCA000010485_02406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296277.1,SO:0001217,UniParc:UPI0001C22BCD,UniRef:UniRef100_A0A066SZG9,UniRef:UniRef50_P23842,UniRef:UniRef90_A0A485JF51
contig_1	tRNAscan-SE	gene	2457909	2457984	.	-	.	ID=GCA000010485_02407_gene;locus_tag=GCA000010485_02407;gene=trnA
contig_1	tRNAscan-SE	tRNA	2457909	2457984	.	-	.	ID=GCA000010485_02407;Name=tRNA-Ala(ggc);locus_tag=GCA000010485_02407;product=tRNA-Ala(ggc);gene=trnA;anti_codon=ggc;amino_acid=Ala;Parent=GCA000010485_02407_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	2458024	2458099	.	-	.	ID=GCA000010485_02408_gene;locus_tag=GCA000010485_02408;gene=trnA
contig_1	tRNAscan-SE	tRNA	2458024	2458099	.	-	.	ID=GCA000010485_02408;Name=tRNA-Ala(ggc);locus_tag=GCA000010485_02408;product=tRNA-Ala(ggc);gene=trnA;anti_codon=ggc;amino_acid=Ala;Parent=GCA000010485_02408_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Pyrodigal	gene	2458320	2458679	.	+	.	ID=GCA000010485_02409_gene;locus_tag=GCA000010485_02409;gene=yfeC
contig_1	Pyrodigal	CDS	2458320	2458679	.	+	0	ID=GCA000010485_02409;Name=putative protein YfeC;locus_tag=GCA000010485_02409;product=putative protein YfeC;gene=yfeC;Parent=GCA000010485_02409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000472021.1,SO:0001217,UniParc:UPI00000D0587,UniRef:UniRef100_P0AD37,UniRef:UniRef50_P0AD37,UniRef:UniRef90_P0AD37
contig_1	Pyrodigal	gene	2458702	2459073	.	+	.	ID=GCA000010485_02410_gene;locus_tag=GCA000010485_02410;gene=yfeD
contig_1	Pyrodigal	CDS	2458702	2459073	.	+	0	ID=GCA000010485_02410;Name=putative protein YfeD;locus_tag=GCA000010485_02410;product=putative protein YfeD;Dbxref=GO:0003677;gene=yfeD;Parent=GCA000010485_02410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001362546.1,SO:0001217,UniParc:UPI00005EFBFA,UniRef:UniRef100_C3T172,UniRef:UniRef50_P27238,UniRef:UniRef90_P27238
contig_1	Pyrodigal	gene	2459124	2460539	.	-	.	ID=GCA000010485_02411_gene;locus_tag=GCA000010485_02411;gene=gltX
contig_1	Pyrodigal	CDS	2459124	2460539	.	-	0	ID=GCA000010485_02411;Name=glutamate--tRNA ligase;locus_tag=GCA000010485_02411;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000010485_02411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_000695662.1,SO:0001217,UniParc:UPI00001363DE,UniRef:UniRef100_Q8FFC9,UniRef:UniRef50_P04805,UniRef:UniRef90_P04805;ec_number=6.1.1.17
contig_1	tRNAscan-SE	gene	2460798	2460873	.	+	.	ID=GCA000010485_02412_gene;locus_tag=GCA000010485_02412;gene=trnV
contig_1	tRNAscan-SE	tRNA	2460798	2460873	.	+	.	ID=GCA000010485_02412;Name=tRNA-Val(tac);locus_tag=GCA000010485_02412;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000010485_02412_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2460918	2460993	.	+	.	ID=GCA000010485_02413_gene;locus_tag=GCA000010485_02413;gene=trnV
contig_1	tRNAscan-SE	tRNA	2460918	2460993	.	+	.	ID=GCA000010485_02413;Name=tRNA-Val(tac);locus_tag=GCA000010485_02413;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000010485_02413_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2461040	2461115	.	+	.	ID=GCA000010485_02414_gene;locus_tag=GCA000010485_02414;gene=trnV
contig_1	tRNAscan-SE	tRNA	2461040	2461115	.	+	.	ID=GCA000010485_02414;Name=tRNA-Val(tac);locus_tag=GCA000010485_02414;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000010485_02414_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2461120	2461195	.	+	.	ID=GCA000010485_02415_gene;locus_tag=GCA000010485_02415;gene=trnK
contig_1	tRNAscan-SE	tRNA	2461120	2461195	.	+	.	ID=GCA000010485_02415;Name=tRNA-Lys(ttt);locus_tag=GCA000010485_02415;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000010485_02415_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	2461306	2462190	.	-	.	ID=GCA000010485_02416_gene;locus_tag=GCA000010485_02416;gene=xapR
contig_1	Pyrodigal	CDS	2461306	2462190	.	-	0	ID=GCA000010485_02416;Name=DNA-binding transcriptional regulator XapR;locus_tag=GCA000010485_02416;product=DNA-binding transcriptional regulator XapR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0032993,GO:0045893;gene=xapR;Parent=GCA000010485_02416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000442949,RefSeq:WP_000442954.1,SO:0001217,UniParc:UPI00016A0CBD,UniRef:UniRef100_E2QPP0,UniRef:UniRef50_P23841,UniRef:UniRef90_P23841
contig_1	Pyrodigal	gene	2462442	2463698	.	-	.	ID=GCA000010485_02417_gene;locus_tag=GCA000010485_02417;gene=xapB
contig_1	Pyrodigal	CDS	2462442	2463698	.	-	0	ID=GCA000010485_02417;Name=xanthosine/proton symporter XapB;locus_tag=GCA000010485_02417;product=xanthosine/proton symporter XapB;Dbxref=GO:0005337,GO:0005886,GO:0015212,GO:0015213,GO:0015293,GO:0015553,GO:0015858,GO:0016020,GO:0055086;gene=xapB;Parent=GCA000010485_02417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000020402,KEGG:K11537,RefSeq:WP_000020390.1,SO:0001217,UniParc:UPI00000DEE45,UniRef:UniRef100_E2QPP1,UniRef:UniRef50_P45562,UniRef:UniRef90_P45562
contig_1	Pyrodigal	gene	2463759	2464592	.	-	.	ID=GCA000010485_02418_gene;locus_tag=GCA000010485_02418;gene=xapA
contig_1	Pyrodigal	CDS	2463759	2464592	.	-	0	ID=GCA000010485_02418;Name=xanthosine phosphorylase;locus_tag=GCA000010485_02418;product=xanthosine phosphorylase;Dbxref=GO:0004731,GO:0005737,GO:0055086;gene=xapA;Parent=GCA000010485_02418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0005,COG:F,KEGG:K03783,RefSeq:WP_000283881.1,SO:0001217,UniParc:UPI0001C22BCE,UniRef:UniRef100_A0A066T3K1,UniRef:UniRef50_P45563,UniRef:UniRef90_B7LL77;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2464841	2465605	.	+	.	ID=GCA000010485_02419_gene;locus_tag=GCA000010485_02419;gene=yfeN
contig_1	Pyrodigal	CDS	2464841	2465605	.	+	0	ID=GCA000010485_02419;Name=putative protein YfeN;locus_tag=GCA000010485_02419;product=putative protein YfeN;Dbxref=GO:0009279;gene=yfeN;Parent=GCA000010485_02419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000716367.1,SO:0001217,UniParc:UPI00005EFDA3,UniRef:UniRef100_E2QPP3,UniRef:UniRef50_P45564,UniRef:UniRef90_P45564
contig_1	Pyrodigal	gene	2465644	2466570	.	-	.	ID=GCA000010485_02420_gene;locus_tag=GCA000010485_02420;gene=yfeR
contig_1	Pyrodigal	CDS	2465644	2466570	.	-	0	ID=GCA000010485_02420;Name=putative HTH-type transcriptional regulator YfeR;locus_tag=GCA000010485_02420;product=putative HTH-type transcriptional regulator YfeR;Dbxref=GO:0003677,GO:0003700,GO:0005829;gene=yfeR;Parent=GCA000010485_02420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001109794.1,SO:0001217,UniParc:UPI000013AE4C,UniRef:UniRef100_P0ACR7,UniRef:UniRef50_P0ACR7,UniRef:UniRef90_P0ACR7
contig_1	Pyrodigal	gene	2466660	2467658	.	+	.	ID=GCA000010485_02421_gene;locus_tag=GCA000010485_02421;gene=yfeH
contig_1	Pyrodigal	CDS	2466660	2467658	.	+	0	ID=GCA000010485_02421;Name=Putative symporter YfeH;locus_tag=GCA000010485_02421;product=Putative symporter YfeH;Dbxref=GO:0005886,GO:0015293;gene=yfeH;Parent=GCA000010485_02421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0385,COG:R,RefSeq:WP_000765604.1,SO:0001217,UniParc:UPI00000D058F,UniRef:UniRef100_C3T157,UniRef:UniRef50_P39836,UniRef:UniRef90_P39836
contig_1	Pyrodigal	gene	2467655	2467873	.	-	.	ID=GCA000010485_02422_gene;locus_tag=GCA000010485_02422;gene=ypeB
contig_1	Pyrodigal	CDS	2467655	2467873	.	-	0	ID=GCA000010485_02422;Name=putative protein YpeB;locus_tag=GCA000010485_02422;product=putative protein YpeB;gene=ypeB;Parent=GCA000010485_02422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3530,COG:S,KEGG:K09954,RefSeq:WP_000410197.1,SO:0001217,UniParc:UPI0001C22BCF,UniRef:UniRef100_A0A066T7R6,UniRef:UniRef50_P0AD40,UniRef:UniRef90_P0AD40
contig_1	Pyrodigal	gene	2467875	2469890	.	-	.	ID=GCA000010485_02423_gene;locus_tag=GCA000010485_02423;gene=ligA
contig_1	Pyrodigal	CDS	2467875	2469890	.	-	0	ID=GCA000010485_02423;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000010485_02423;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000010485_02423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_000443709.1,SO:0001217,UniParc:UPI0001C22BD0,UniRef:UniRef100_A0A066T3J5,UniRef:UniRef50_P15042,UniRef:UniRef90_P15042;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	2469961	2470959	.	-	.	ID=GCA000010485_02424_gene;locus_tag=GCA000010485_02424;gene=zipA
contig_1	Pyrodigal	CDS	2469961	2470959	.	-	0	ID=GCA000010485_02424;Name=cell division protein ZipA;locus_tag=GCA000010485_02424;product=cell division protein ZipA;Dbxref=GO:0000917,GO:0005515,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=zipA;Parent=GCA000010485_02424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3115,COG:D,KEGG:K03528,RefSeq:WP_012896823.1,SO:0001217,UniParc:UPI0001C22BD1,UniRef:UniRef100_UPI0001C22BD1,UniRef:UniRef50_P77173,UniRef:UniRef90_P77173
contig_1	Pyrodigal	gene	2471189	2471950	.	+	.	ID=GCA000010485_02425_gene;locus_tag=GCA000010485_02425;gene=cysZ
contig_1	Pyrodigal	CDS	2471189	2471950	.	+	0	ID=GCA000010485_02425;Name=sulfate transporter CysZ;locus_tag=GCA000010485_02425;product=sulfate transporter CysZ;Dbxref=GO:0000103,GO:0005886,GO:0009675,GO:0015116,GO:0019344;gene=cysZ;Parent=GCA000010485_02425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2981,COG:EP,KEGG:K06203,RefSeq:WP_000254839.1,SO:0001217,UniParc:UPI0000128D51,UniRef:UniRef100_P0A6J3,UniRef:UniRef50_P0A6J3,UniRef:UniRef90_P0A6J3
contig_1	Pyrodigal	gene	2472135	2473106	.	+	.	ID=GCA000010485_02426_gene;locus_tag=GCA000010485_02426;gene=cysK
contig_1	Pyrodigal	CDS	2472135	2473106	.	+	0	ID=GCA000010485_02426;Name=cysteine synthase A;locus_tag=GCA000010485_02426;product=cysteine synthase A;Dbxref=GO:0004124,GO:0005737,GO:0006535,GO:0080146;gene=cysK;Parent=GCA000010485_02426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000034402.1,SO:0001217,UniParc:UPI00001654B9,UniRef:UniRef100_P0ABK5,UniRef:UniRef50_P0ABK5,UniRef:UniRef90_P0ABK5;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	2473490	2473747	.	+	.	ID=GCA000010485_02427_gene;locus_tag=GCA000010485_02427;gene=ptsH
contig_1	Pyrodigal	CDS	2473490	2473747	.	+	0	ID=GCA000010485_02427;Name=phosphocarrier protein Hpr;locus_tag=GCA000010485_02427;product=phosphocarrier protein Hpr;Dbxref=GO:0004857,GO:0005829,GO:0008047,GO:0009401,GO:0016775,GO:0030234,GO:0043609,GO:0045152,GO:0045819;gene=ptsH;Parent=GCA000010485_02427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_000487600.1,SO:0001217,UniParc:UPI0000059AFA,UniRef:UniRef100_P0AA04,UniRef:UniRef50_P0AA04,UniRef:UniRef90_P0AA04
contig_1	Pyrodigal	gene	2473792	2475519	.	+	.	ID=GCA000010485_02428_gene;locus_tag=GCA000010485_02428;gene=ptsI
contig_1	Pyrodigal	CDS	2473792	2475519	.	+	0	ID=GCA000010485_02428;Name=phosphoenolpyruvate-protein phosphotransferase PtsI;locus_tag=GCA000010485_02428;product=phosphoenolpyruvate-protein phosphotransferase PtsI;Dbxref=GO:0005829,GO:0008965,GO:0009401,GO:0016301,GO:0042802,GO:0046872;gene=ptsI;Parent=GCA000010485_02428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_000623108.1,SO:0001217,UniParc:UPI0001C22BD2,UniRef:UniRef100_A0A066T3J0,UniRef:UniRef50_P08839,UniRef:UniRef90_P08839;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	2475560	2476069	.	+	.	ID=GCA000010485_02429_gene;locus_tag=GCA000010485_02429;gene=crr
contig_1	Pyrodigal	CDS	2475560	2476069	.	+	0	ID=GCA000010485_02429;Name=PTS glucose transporter subunit IIA;locus_tag=GCA000010485_02429;product=PTS glucose transporter subunit IIA;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0046872;gene=crr;Parent=GCA000010485_02429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000522247.1,SO:0001217,UniParc:UPI00001639E2,UniRef:UniRef100_P69783,UniRef:UniRef50_P69783,UniRef:UniRef90_P69783;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	2476112	2476963	.	-	.	ID=GCA000010485_02430_gene;locus_tag=GCA000010485_02430;gene=pdxK
contig_1	Pyrodigal	CDS	2476112	2476963	.	-	0	ID=GCA000010485_02430;Name=pyridoxine/pyridoxal/pyridoxamine kinase;locus_tag=GCA000010485_02430;product=pyridoxine/pyridoxal/pyridoxamine kinase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0008270,GO:0008478,GO:0008902,GO:0009443;gene=pdxK;Parent=GCA000010485_02430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2240,COG:H,KEGG:K00868,RefSeq:WP_000096640.1,SO:0001217,UniParc:UPI00000DEE50,UniRef:UniRef100_B7MHS2,UniRef:UniRef50_P40191,UniRef:UniRef90_P40191;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	2477068	2477436	.	+	.	ID=GCA000010485_02431_gene;locus_tag=GCA000010485_02431;gene=yfeK
contig_1	Pyrodigal	CDS	2477068	2477436	.	+	0	ID=GCA000010485_02431;Name=putative protein YfeK;locus_tag=GCA000010485_02431;product=putative protein YfeK;gene=yfeK;Parent=GCA000010485_02431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000719965.1,SO:0001217,UniParc:UPI00000E4A49,UniRef:UniRef100_A0A061L331,UniRef:UniRef50_Q47702,UniRef:UniRef90_Q47702
contig_1	Pyrodigal	gene	2477439	2478350	.	-	.	ID=GCA000010485_02432_gene;locus_tag=GCA000010485_02432;gene=cysM
contig_1	Pyrodigal	CDS	2477439	2478350	.	-	0	ID=GCA000010485_02432;Name=cysteine synthase CysM;locus_tag=GCA000010485_02432;product=cysteine synthase CysM;Dbxref=GO:0004124,GO:0005737,GO:0006535,GO:0019344;gene=cysM;Parent=GCA000010485_02432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000105467.1,SO:0001217,UniParc:UPI00000DEE51,UniRef:UniRef100_E2QPQ6,UniRef:UniRef50_P16703,UniRef:UniRef90_P16703;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	2478485	2479582	.	-	.	ID=GCA000010485_02433_gene;locus_tag=GCA000010485_02433;gene=cysA
contig_1	Pyrodigal	CDS	2478485	2479582	.	-	0	ID=GCA000010485_02433;Name=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;locus_tag=GCA000010485_02433;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;Dbxref=GO:0005524,GO:0015419,GO:0016020,GO:0016887,GO:0043190,GO:0102025,GO:1902358;gene=cysA;Parent=GCA000010485_02433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1118,COG:P,RefSeq:WP_000021034.1,SO:0001217,UniParc:UPI00000DEE52,UniRef:UniRef100_Q8FFB3,UniRef:UniRef50_P16676,UniRef:UniRef90_P16676;ec_number=7.3.2.3
contig_1	Pyrodigal	gene	2479572	2480447	.	-	.	ID=GCA000010485_02434_gene;locus_tag=GCA000010485_02434;gene=cysW
contig_1	Pyrodigal	CDS	2479572	2480447	.	-	0	ID=GCA000010485_02434;Name=sulfate/thiosulfate ABC transporter permease CysW;locus_tag=GCA000010485_02434;product=sulfate/thiosulfate ABC transporter permease CysW;Dbxref=GO:0005886,GO:0015419,GO:0015709,GO:0016020,GO:0035796,GO:0055085,GO:1902358;gene=cysW;Parent=GCA000010485_02434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4208,COG:P,KEGG:K02047,RefSeq:WP_000852686.1,SO:0001217,UniParc:UPI0000128D4C,UniRef:UniRef100_P0AEB0,UniRef:UniRef50_P0AEB0,UniRef:UniRef90_P0AEB0;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	2480447	2481280	.	-	.	ID=GCA000010485_02435_gene;locus_tag=GCA000010485_02435;gene=cysT
contig_1	Pyrodigal	CDS	2480447	2481280	.	-	0	ID=GCA000010485_02435;Name=sulfate/thiosulfate ABC transporter permease CysT;locus_tag=GCA000010485_02435;product=sulfate/thiosulfate ABC transporter permease CysT;Dbxref=GO:0005886,GO:0015419,GO:0016020,GO:0055085,GO:1902358;gene=cysT;Parent=GCA000010485_02435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0555,COG:P,RefSeq:WP_000458408.1,SO:0001217,UniParc:UPI00005EF9F2,UniRef:UniRef100_E2QPQ9,UniRef:UniRef50_P16701,UniRef:UniRef90_P16701;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	2481280	2482296	.	-	.	ID=GCA000010485_02436_gene;locus_tag=GCA000010485_02436;gene=cysP
contig_1	Pyrodigal	CDS	2481280	2482296	.	-	0	ID=GCA000010485_02436;Name=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;locus_tag=GCA000010485_02436;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;Dbxref=GO:0042597,GO:1901681,GO:1902358;gene=cysP;Parent=GCA000010485_02436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000290230,COG:COG4150,COG:P,RefSeq:WP_000290263.1,SO:0001217,UniParc:UPI00000E4A4A,UniRef:UniRef100_E2QPR0,UniRef:UniRef50_P16700,UniRef:UniRef90_P16700
contig_1	Pyrodigal	gene	2482454	2483245	.	-	.	ID=GCA000010485_02437_gene;locus_tag=GCA000010485_02437;gene=ucpA
contig_1	Pyrodigal	CDS	2482454	2483245	.	-	0	ID=GCA000010485_02437;Name=SDR family oxidoreductase UcpA;locus_tag=GCA000010485_02437;product=SDR family oxidoreductase UcpA;Dbxref=GO:0016491;gene=ucpA;Parent=GCA000010485_02437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000517443.1,SO:0001217,UniParc:UPI00005EF9F4,UniRef:UniRef100_E2QPR1,UniRef:UniRef50_P37440,UniRef:UniRef90_P37440;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2483525	2484421	.	+	.	ID=GCA000010485_02438_gene;locus_tag=GCA000010485_02438;gene=murQ
contig_1	Pyrodigal	CDS	2483525	2484421	.	+	0	ID=GCA000010485_02438;Name=N-acetylmuramic acid 6-phosphate etherase;locus_tag=GCA000010485_02438;product=N-acetylmuramic acid 6-phosphate etherase;Dbxref=GO:0009254,GO:0016803,GO:0016835,GO:0046348,GO:0097173,GO:0097175,GO:0097367;gene=murQ;Parent=GCA000010485_02438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2103,COG:M,KEGG:K07106,RefSeq:WP_001175628.1,SO:0001217,UniParc:UPI0001C22BD3,UniRef:UniRef100_A0A066T3H9,UniRef:UniRef50_P76535,UniRef:UniRef90_P76535;ec_number=4.2.1.126
contig_1	Pyrodigal	gene	2484425	2485849	.	+	.	ID=GCA000010485_02439_gene;locus_tag=GCA000010485_02439;gene=murP
contig_1	Pyrodigal	CDS	2484425	2485849	.	+	0	ID=GCA000010485_02439;Name=PTS N-acetylmuramic acid transporter subunit IIBC;locus_tag=GCA000010485_02439;product=PTS N-acetylmuramic acid transporter subunit IIBC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016020,GO:0016301,GO:0090588;gene=murP;Parent=GCA000010485_02439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K11192,RefSeq:WP_001040496.1,SO:0001217,UniParc:UPI0001C22BD4,UniRef:UniRef100_A0A066SZD4,UniRef:UniRef50_P77272,UniRef:UniRef90_P77272;ec_number=2.7.1.192
contig_1	Pyrodigal	gene	2486027	2486926	.	-	.	ID=GCA000010485_02440_gene;locus_tag=GCA000010485_02440;gene=yfeX
contig_1	Pyrodigal	CDS	2486027	2486926	.	-	0	ID=GCA000010485_02440;Name=porphyrinogen peroxidase;locus_tag=GCA000010485_02440;product=porphyrinogen peroxidase;gene=yfeX;Parent=GCA000010485_02440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001350538,COG:COG2837,COG:P,KEGG:K07223,RefSeq:WP_000084590.1,SO:0001217,UniParc:UPI00005EF178,UniRef:UniRef100_E2QPR4,UniRef:UniRef50_P76536,UniRef:UniRef90_E2QPR4;ec_number=4.99.1.1
contig_1	Pyrodigal	gene	2487022	2487597	.	-	.	ID=GCA000010485_02441_gene;locus_tag=GCA000010485_02441;gene=yfeY
contig_1	Pyrodigal	CDS	2487022	2487597	.	-	0	ID=GCA000010485_02441;Name=RpoE-regulated lipoprotein;locus_tag=GCA000010485_02441;product=RpoE-regulated lipoprotein;gene=yfeY;Parent=GCA000010485_02441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000838953.1,SO:0001217,UniParc:UPI0001C22BD5,UniRef:UniRef100_A0A066T7P5,UniRef:UniRef50_P76537,UniRef:UniRef90_P76537
contig_1	Pyrodigal	gene	2487658	2488107	.	-	.	ID=GCA000010485_02442_gene;locus_tag=GCA000010485_02442;gene=yfeZ
contig_1	Pyrodigal	CDS	2487658	2488107	.	-	0	ID=GCA000010485_02442;Name=Inner membrane protein YfeZ;locus_tag=GCA000010485_02442;product=Inner membrane protein YfeZ;Dbxref=GO:0005886;gene=yfeZ;Parent=GCA000010485_02442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296281.1,SO:0001217,UniParc:UPI00005EF9F7,UniRef:UniRef100_E2QPR6,UniRef:UniRef50_P76538,UniRef:UniRef90_P76538
contig_1	Pyrodigal	gene	2488094	2488519	.	-	.	ID=GCA000010485_02443_gene;locus_tag=GCA000010485_02443;gene=ypeA
contig_1	Pyrodigal	CDS	2488094	2488519	.	-	0	ID=GCA000010485_02443;Name=GNAT family acetyltransferase;locus_tag=GCA000010485_02443;product=GNAT family acetyltransferase;Dbxref=GO:0008080,GO:0016747;gene=ypeA;Parent=GCA000010485_02443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000406012.1,SO:0001217,UniParc:UPI0001C22BD6,UniRef:UniRef100_A0A061YET8,UniRef:UniRef50_P63421,UniRef:UniRef90_P63421;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2488733	2489602	.	+	.	ID=GCA000010485_02444_gene;locus_tag=GCA000010485_02444;gene=amiA
contig_1	Pyrodigal	CDS	2488733	2489602	.	+	0	ID=GCA000010485_02444;Name=N-acetylmuramoyl-L-alanine amidase AmiA;locus_tag=GCA000010485_02444;product=N-acetylmuramoyl-L-alanine amidase AmiA;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0043093,GO:0071555;gene=amiA;Parent=GCA000010485_02444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0860,COG:M,KEGG:K01448,RefSeq:WP_000102910.1,SO:0001217,UniParc:UPI0000D50B22,UniRef:UniRef100_E2QPR8,UniRef:UniRef50_P36548,UniRef:UniRef90_P36548;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	2489603	2490505	.	+	.	ID=GCA000010485_02445_gene;locus_tag=GCA000010485_02445;gene=hemF
contig_1	Pyrodigal	CDS	2489603	2490505	.	+	0	ID=GCA000010485_02445;Name=oxygen-dependent coproporphyrinogen oxidase;locus_tag=GCA000010485_02445;product=oxygen-dependent coproporphyrinogen oxidase;Dbxref=GO:0004109,GO:0005737,GO:0006779,GO:0006782,GO:0030145,GO:0042803;gene=hemF;Parent=GCA000010485_02445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0408,COG:H,KEGG:K00228,SO:0001217,UniParc:UPI0001E8C4E9,UniRef:UniRef100_A0A061YM61,UniRef:UniRef50_P36553,UniRef:UniRef90_P36553;ec_number=1.3.3.3
contig_1	Pyrodigal	gene	2490511	2491563	.	-	.	ID=GCA000010485_02446_gene;locus_tag=GCA000010485_02446;gene=eutR
contig_1	Pyrodigal	CDS	2490511	2491563	.	-	0	ID=GCA000010485_02446;Name=HTH-type transcriptional regulator EutR;locus_tag=GCA000010485_02446;product=HTH-type transcriptional regulator EutR;Dbxref=GO:0003700,GO:0006355,GO:0043565,GO:0046336;gene=eutR;Parent=GCA000010485_02446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04033,RefSeq:WP_000753680.1,SO:0001217,UniParc:UPI0001C22BE9,UniRef:UniRef100_A0A061L300,UniRef:UniRef50_Q9ZFU7,UniRef:UniRef90_P36547
contig_1	Pyrodigal	gene	2491609	2492109	.	-	.	ID=GCA000010485_02447_gene;locus_tag=GCA000010485_02447;gene=eutK
contig_1	Pyrodigal	CDS	2491609	2492109	.	-	0	ID=GCA000010485_02447;Name=ethanolamine utilization microcompartment protein EutK;locus_tag=GCA000010485_02447;product=ethanolamine utilization microcompartment protein EutK;Dbxref=GO:0005198,GO:0010165,GO:0031471,GO:0046336;gene=eutK;Parent=GCA000010485_02447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4577,COG:QC,KEGG:K04025,RefSeq:WP_001295463.1,SO:0001217,UniParc:UPI00005EF9F9,UniRef:UniRef100_C3T0S5,UniRef:UniRef50_Q9ZFU8,UniRef:UniRef90_P76540
contig_1	Pyrodigal	gene	2492122	2492781	.	-	.	ID=GCA000010485_02448_gene;locus_tag=GCA000010485_02448;gene=eutL
contig_1	Pyrodigal	CDS	2492122	2492781	.	-	0	ID=GCA000010485_02448;Name=ethanolamine utilization microcompartment protein EutL;locus_tag=GCA000010485_02448;product=ethanolamine utilization microcompartment protein EutL;Dbxref=GO:0005198,GO:0006091,GO:0031469,GO:0031471,GO:0046336;gene=eutL;Parent=GCA000010485_02448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4816,COG:E,KEGG:K04026,RefSeq:WP_001111047.1,SO:0001217,UniParc:UPI00000DEE5C,UniRef:UniRef100_E2QPS2,UniRef:UniRef50_P0A1C9,UniRef:UniRef90_P0A1C9
contig_1	Pyrodigal	gene	2492791	2493678	.	-	.	ID=GCA000010485_02449_gene;locus_tag=GCA000010485_02449;gene=eutC
contig_1	Pyrodigal	CDS	2492791	2493678	.	-	0	ID=GCA000010485_02449;Name=ethanolamine ammonia-lyase subunit beta;locus_tag=GCA000010485_02449;product=ethanolamine ammonia-lyase subunit beta;Dbxref=GO:0006520,GO:0008851,GO:0009350,GO:0031419,GO:0031471,GO:0046336;gene=eutC;Parent=GCA000010485_02449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000372316,COG:COG4302,COG:E,KEGG:K03736,RefSeq:WP_000372320.1,SO:0001217,UniParc:UPI0001C22BEA,UniRef:UniRef100_A0A061YIP8,UniRef:UniRef50_P19265,UniRef:UniRef90_Q8XEH3;ec_number=4.3.1.7
contig_1	Pyrodigal	gene	2493699	2495060	.	-	.	ID=GCA000010485_02450_gene;locus_tag=GCA000010485_02450;gene=eutB
contig_1	Pyrodigal	CDS	2493699	2495060	.	-	0	ID=GCA000010485_02450;Name=ethanolamine ammonia-lyase subunit alpha;locus_tag=GCA000010485_02450;product=ethanolamine ammonia-lyase subunit alpha;Dbxref=GO:0005829,GO:0006520,GO:0008851,GO:0009350,GO:0031419,GO:0031471,GO:0046336;gene=eutB;Parent=GCA000010485_02450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000769961,KEGG:K03735,RefSeq:WP_000769961.1,SO:0001217,UniParc:UPI000012A27E,UniRef:UniRef100_P0AEJ6,UniRef:UniRef50_P0AEJ6,UniRef:UniRef90_P0AEJ6;ec_number=4.3.1.7
contig_1	Pyrodigal	gene	2495072	2496475	.	-	.	ID=GCA000010485_02451_gene;locus_tag=GCA000010485_02451;gene=eutA
contig_1	Pyrodigal	CDS	2495072	2496475	.	-	0	ID=GCA000010485_02451;Name=ethanolamine ammonia-lyase reactivating factor EutA;locus_tag=GCA000010485_02451;product=ethanolamine ammonia-lyase reactivating factor EutA;Dbxref=GO:0030091,GO:0031469,GO:0046336;gene=eutA;Parent=GCA000010485_02451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04019,RefSeq:WP_001097492.1,SO:0001217,UniParc:UPI0001C22BEB,UniRef:UniRef100_A0A061L2Z2,UniRef:UniRef50_P76551,UniRef:UniRef90_P76551
contig_1	Pyrodigal	gene	2496472	2497698	.	-	.	ID=GCA000010485_02452_gene;locus_tag=GCA000010485_02452;gene=eutH
contig_1	Pyrodigal	CDS	2496472	2497698	.	-	0	ID=GCA000010485_02452;Name=ethanolamine utilization protein EutH;locus_tag=GCA000010485_02452;product=ethanolamine utilization protein EutH;Dbxref=GO:0016020,GO:0034228,GO:0034229;gene=eutH;Parent=GCA000010485_02452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3192,COG:E,KEGG:K04023,RefSeq:WP_000512385.1,SO:0001217,UniParc:UPI00005EF9FB,UniRef:UniRef100_A0A061L289,UniRef:UniRef50_A8ADE3,UniRef:UniRef90_A8ADE3
contig_1	Infernal	gene	2497779	2497860	.	-	.	ID=GCA000010485_02453_gene;locus_tag=GCA000010485_02453;gene=naRNA4
contig_1	Infernal	ncRNA	2497779	2497860	4.1e-11	-	.	ID=GCA000010485_02453;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02453;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02453_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2497915	2499102	.	-	.	ID=GCA000010485_02454_gene;locus_tag=GCA000010485_02454;gene=eutG
contig_1	Pyrodigal	CDS	2497915	2499102	.	-	0	ID=GCA000010485_02454;Name=ethanolamine utilization ethanol dehydrogenase EutG;locus_tag=GCA000010485_02454;product=ethanolamine utilization ethanol dehydrogenase EutG;Dbxref=GO:0004022,GO:0016491,GO:0016616,GO:0031469,GO:0046336,GO:0046872;gene=eutG;Parent=GCA000010485_02454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04022,RefSeq:WP_001296283.1,SO:0001217,UniParc:UPI0001C22BEC,UniRef:UniRef100_A0A061L6P1,UniRef:UniRef50_P41795,UniRef:UniRef90_P76553;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	2499092	2499928	.	-	.	ID=GCA000010485_02455_gene;locus_tag=GCA000010485_02455;gene=eutJ
contig_1	Pyrodigal	CDS	2499092	2499928	.	-	0	ID=GCA000010485_02455;Name=ethanolamine utilization protein EutJ;locus_tag=GCA000010485_02455;product=ethanolamine utilization protein EutJ;Dbxref=GO:0005515,GO:0046336,GO:0051301;gene=eutJ;Parent=GCA000010485_02455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04024,RefSeq:WP_000929721.1,SO:0001217,UniParc:UPI0001C22BED,UniRef:UniRef100_A0A061YIQ3,UniRef:UniRef50_P0A206,UniRef:UniRef90_P77277
contig_1	Pyrodigal	gene	2499939	2501342	.	-	.	ID=GCA000010485_02456_gene;locus_tag=GCA000010485_02456;gene=eutE
contig_1	Pyrodigal	CDS	2499939	2501342	.	-	0	ID=GCA000010485_02456;Name=Acetaldehyde dehydrogenase (acetylating) EutE;locus_tag=GCA000010485_02456;product=Acetaldehyde dehydrogenase (acetylating) EutE;Dbxref=GO:0004029,GO:0008774,GO:0031469,GO:0046336;gene=eutE;Parent=GCA000010485_02456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04021,RefSeq:WP_001075677.1,SO:0001217,UniParc:UPI0001C22BEE,UniRef:UniRef100_A0A6D0S317,UniRef:UniRef50_P77445,UniRef:UniRef90_P77445;ec_number=1.2.1.10
contig_1	Pyrodigal	gene	2501354	2501641	.	-	.	ID=GCA000010485_02457_gene;locus_tag=GCA000010485_02457;gene=eutN
contig_1	Pyrodigal	CDS	2501354	2501641	.	-	0	ID=GCA000010485_02457;Name=ethanolamine utilization microcompartment protein EutN;locus_tag=GCA000010485_02457;product=ethanolamine utilization microcompartment protein EutN;Dbxref=GO:0006974,GO:0031469,GO:0034214,GO:0042802,GO:0046336;gene=eutN;Parent=GCA000010485_02457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04028,RefSeq:WP_000762196.1,SO:0001217,UniParc:UPI000012A29A,UniRef:UniRef100_P0AEJ8,UniRef:UniRef50_P0AEJ8,UniRef:UniRef90_P0AEJ8
contig_1	Pyrodigal	gene	2501748	2502041	.	-	.	ID=GCA000010485_02458_gene;locus_tag=GCA000010485_02458;gene=eutM
contig_1	Pyrodigal	CDS	2501748	2502041	.	-	0	ID=GCA000010485_02458;Name=ethanolamine utilization microcompartment protein EutM;locus_tag=GCA000010485_02458;product=ethanolamine utilization microcompartment protein EutM;Dbxref=GO:0006091,GO:0031471,GO:0046336;gene=eutM;Parent=GCA000010485_02458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4577,COG:QC,RefSeq:WP_000387713.1,SO:0001217,UniParc:UPI000012A298,UniRef:UniRef100_P0ABF4,UniRef:UniRef50_P41791,UniRef:UniRef90_P41791
contig_1	Pyrodigal	gene	2502080	2503096	.	-	.	ID=GCA000010485_02459_gene;locus_tag=GCA000010485_02459;gene=pta
contig_1	Pyrodigal	CDS	2502080	2503096	.	-	0	ID=GCA000010485_02459;Name=phosphate acetyltransferase;locus_tag=GCA000010485_02459;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006086,GO:0008959,GO:0009408,GO:0042803,GO:0046336;gene=pta;Parent=GCA000010485_02459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04020,RefSeq:WP_000584522.1,SO:0001217,UniParc:UPI00000DEE64,UniRef:UniRef100_A0A066SZB3,UniRef:UniRef50_P77218,UniRef:UniRef90_P77218;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	2503093	2503896	.	-	.	ID=GCA000010485_02460_gene;locus_tag=GCA000010485_02460;gene=eutT
contig_1	Pyrodigal	CDS	2503093	2503896	.	-	0	ID=GCA000010485_02460;Name=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;locus_tag=GCA000010485_02460;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;Dbxref=GO:0005524,GO:0006580,GO:0008817,GO:0009236,GO:0031469,GO:0046336,GO:0046872;gene=eutT;Parent=GCA000010485_02460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04032,RefSeq:WP_000651309.1,SO:0001217,UniParc:UPI0001C22BEF,UniRef:UniRef100_A0A066SZM7,UniRef:UniRef50_Q9ZFV4,UniRef:UniRef90_P65643;ec_number=2.5.1.17
contig_1	Pyrodigal	gene	2503893	2504594	.	-	.	ID=GCA000010485_02461_gene;locus_tag=GCA000010485_02461;gene=eutQ
contig_1	Pyrodigal	CDS	2503893	2504594	.	-	0	ID=GCA000010485_02461;Name=ethanolamine utilization acetate kinase EutQ;locus_tag=GCA000010485_02461;product=ethanolamine utilization acetate kinase EutQ;Dbxref=GO:0008776,GO:0031469,GO:0046336;gene=eutQ;Parent=GCA000010485_02461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04030,RefSeq:WP_000733876.1,SO:0001217,UniParc:UPI000188775C,UniRef:UniRef100_A0A061YM78,UniRef:UniRef50_Q9ZFV5,UniRef:UniRef90_P76555;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	2504569	2505048	.	-	.	ID=GCA000010485_02462_gene;locus_tag=GCA000010485_02462;gene=eutP
contig_1	Pyrodigal	CDS	2504569	2505048	.	-	0	ID=GCA000010485_02462;Name=ethanolamine utilization acetate kinase EutP;locus_tag=GCA000010485_02462;product=ethanolamine utilization acetate kinase EutP;gene=eutP;Parent=GCA000010485_02462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04029,RefSeq:WP_000820789.1,SO:0001217,UniParc:UPI0000D50B2A,UniRef:UniRef100_E2QPT5,UniRef:UniRef50_P0A208,UniRef:UniRef90_J7Q8T1;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	2505061	2505396	.	-	.	ID=GCA000010485_02463_gene;locus_tag=GCA000010485_02463;gene=eutS
contig_1	Pyrodigal	CDS	2505061	2505396	.	-	0	ID=GCA000010485_02463;Name=Bacterial microcompartment shell protein EutS;locus_tag=GCA000010485_02463;product=Bacterial microcompartment shell protein EutS;Dbxref=GO:0006091,GO:0031471,GO:0046336;gene=eutS;Parent=GCA000010485_02463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4810,COG:E,KEGG:K04031,RefSeq:WP_000356956.1,SO:0001217,UniParc:UPI000012A2A1,UniRef:UniRef100_P63746,UniRef:UniRef50_Q9ZFV7,UniRef:UniRef90_Q9ZFV7
contig_1	Pyrodigal	gene	2505689	2507968	.	-	.	ID=GCA000010485_02464_gene;locus_tag=GCA000010485_02464;gene=maeB
contig_1	Pyrodigal	CDS	2505689	2507968	.	-	0	ID=GCA000010485_02464;Name=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;locus_tag=GCA000010485_02464;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;Dbxref=GO:0004473,GO:0005829,GO:0006108,GO:0008948,GO:0016746,GO:0030145,GO:0042802,GO:0043883,GO:0051287;gene=maeB;Parent=GCA000010485_02464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000344297,COG:C,COG:COG0281,RefSeq:WP_000342643.1,SO:0001217,UniParc:UPI00000D05CE,UniRef:UniRef100_C3T0K2,UniRef:UniRef50_P76558,UniRef:UniRef90_P76558;ec_number=1.1.1.40
contig_1	Pyrodigal	gene	2508257	2509207	.	+	.	ID=GCA000010485_02465_gene;locus_tag=GCA000010485_02465;gene=tal
contig_1	Pyrodigal	CDS	2508257	2509207	.	+	0	ID=GCA000010485_02465;Name=transaldolase;locus_tag=GCA000010485_02465;product=transaldolase;Dbxref=GO:0004801,GO:0005737,GO:0005829,GO:0005975,GO:0006098;gene=tal;Parent=GCA000010485_02465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00616,RefSeq:WP_001003709.1,SO:0001217,UniParc:UPI0000136893,UniRef:UniRef100_P0A867,UniRef:UniRef50_P0A867,UniRef:UniRef90_P0A867;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	2509227	2511230	.	+	.	ID=GCA000010485_02466_gene;locus_tag=GCA000010485_02466;gene=tkt
contig_1	Pyrodigal	CDS	2509227	2511230	.	+	0	ID=GCA000010485_02466;Name=transketolase;locus_tag=GCA000010485_02466;product=transketolase;Dbxref=GO:0004802,GO:0005829,GO:0006098,GO:0009052,GO:0046872;gene=tkt;Parent=GCA000010485_02466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_000087313.1,SO:0001217,UniParc:UPI0001C22BF0,UniRef:UniRef100_A0A066T7T3,UniRef:UniRef50_P27302,UniRef:UniRef90_P33570;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	2511307	2512305	.	-	.	ID=GCA000010485_02467_gene;locus_tag=GCA000010485_02467
contig_1	Pyrodigal	CDS	2511307	2512305	.	-	0	ID=GCA000010485_02467;Name=DUF1176 domain-containing protein;locus_tag=GCA000010485_02467;product=DUF1176 domain-containing protein;Parent=GCA000010485_02467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P76559,UniRef:UniRef90_B7MHV8
contig_1	Pyrodigal	gene	2512476	2513051	.	-	.	ID=GCA000010485_02468_gene;locus_tag=GCA000010485_02468;gene=nudK
contig_1	Pyrodigal	CDS	2512476	2513051	.	-	0	ID=GCA000010485_02468;Name=GDP-mannose pyrophosphatase NudK;locus_tag=GCA000010485_02468;product=GDP-mannose pyrophosphatase NudK;Dbxref=GO:0005829,GO:0006753,GO:0016818,GO:0019693,GO:0046872;gene=nudK;Parent=GCA000010485_02468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,KEGG:K12945,RefSeq:WP_001296284.1,SO:0001217,UniParc:UPI00005EFA05,UniRef:UniRef100_A1ADX2,UniRef:UniRef50_P37128,UniRef:UniRef90_P37128;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	2513119	2515098	.	-	.	ID=GCA000010485_02469_gene;locus_tag=GCA000010485_02469;gene=aegA
contig_1	Pyrodigal	CDS	2513119	2515098	.	-	0	ID=GCA000010485_02469;Name=formate-dependent uric acid utilization protein AegA;locus_tag=GCA000010485_02469;product=formate-dependent uric acid utilization protein AegA;Dbxref=GO:0016491,GO:0019628,GO:0046872,GO:0051539;gene=aegA;Parent=GCA000010485_02469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1142,RefSeq:WP_001078844.1,SO:0001217,UniParc:UPI0001C22BF2,UniRef:UniRef100_A0A066SZA4,UniRef:UniRef50_P37127,UniRef:UniRef90_P37127
contig_1	Pyrodigal	gene	2515304	2517004	.	+	.	ID=GCA000010485_02470_gene;locus_tag=GCA000010485_02470;gene=narQ
contig_1	Pyrodigal	CDS	2515304	2517004	.	+	0	ID=GCA000010485_02470;Name=nitrate/nitrite two-component system sensor histidine kinase NarQ;locus_tag=GCA000010485_02470;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0042128,GO:0046983,GO:0071249,GO:0071250;gene=narQ;Parent=GCA000010485_02470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3850,COG:T,KEGG:K07674,RefSeq:WP_001296285.1,SO:0001217,UniParc:UPI0000DACF3E,UniRef:UniRef100_E2QPU3,UniRef:UniRef50_P27896,UniRef:UniRef90_P27896;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2517168	2520281	.	+	.	ID=GCA000010485_02471_gene;locus_tag=GCA000010485_02471;gene=acrD
contig_1	Pyrodigal	CDS	2517168	2520281	.	+	0	ID=GCA000010485_02471;Name=multidrug efflux RND transporter permease AcrD;locus_tag=GCA000010485_02471;product=multidrug efflux RND transporter permease AcrD;Dbxref=GO:0005886,GO:0009636,GO:0015125,GO:0015562,GO:0015721,GO:0016020,GO:0042908,GO:0042910,GO:0046677,GO:0098567,GO:0140330,GO:1990281;gene=acrD;Parent=GCA000010485_02471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_001273136.1,SO:0001217,UniParc:UPI00005F02C1,UniRef:UniRef100_A0A037YJ80,UniRef:UniRef50_P24177,UniRef:UniRef90_P24177
contig_1	Bakta	gene	2520380	2520439	.	-	.	ID=GCA000010485_02472_gene;locus_tag=GCA000010485_02472;inference=ab initio prediction:Bakta;gene=ypfM
contig_1	Bakta	CDS	2520380	2520439	.	-	0	ID=GCA000010485_02472;Name=protein YpfM;locus_tag=GCA000010485_02472;product=protein YpfM;Dbxref=GO:0005737;gene=ypfM;Parent=GCA000010485_02472_gene;Note=RefSeq:WP_001386977.1,SO:0001217,UniParc:UPI00000502F3,UniRef:UniRef100_A5A621,UniRef:UniRef50_A5A621,UniRef:UniRef90_A5A621
contig_1	Pyrodigal	gene	2520820	2521176	.	+	.	ID=GCA000010485_02473_gene;locus_tag=GCA000010485_02473;gene=yffB
contig_1	Pyrodigal	CDS	2520820	2521176	.	+	0	ID=GCA000010485_02473;Name=ArsC family reductase;locus_tag=GCA000010485_02473;product=ArsC family reductase;Dbxref=GO:0005829;gene=yffB;Parent=GCA000010485_02473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_000258253.1,SO:0001217,UniParc:UPI00005EFA09,UniRef:UniRef100_E2QPU5,UniRef:UniRef50_P24178,UniRef:UniRef90_P24178
contig_1	Pyrodigal	gene	2521180	2522307	.	+	.	ID=GCA000010485_02474_gene;locus_tag=GCA000010485_02474;gene=dapE
contig_1	Pyrodigal	CDS	2521180	2522307	.	+	0	ID=GCA000010485_02474;Name=succinyl-diaminopimelate desuccinylase;locus_tag=GCA000010485_02474;product=succinyl-diaminopimelate desuccinylase;Dbxref=GO:0009014,GO:0009089;gene=dapE;Parent=GCA000010485_02474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_001277795.1,SO:0001217,UniParc:UPI000191E4C2,UniRef:UniRef100_E2QPU6,UniRef:UniRef50_B3PBB9,UniRef:UniRef90_G8LMF7;ec_number=3.5.1.18
contig_1	Pyrodigal	gene	2522335	2522535	.	+	.	ID=GCA000010485_02475_gene;locus_tag=GCA000010485_02475;gene=ypfN
contig_1	Pyrodigal	CDS	2522335	2522535	.	+	0	ID=GCA000010485_02475;Name=UPF0370 protein YpfN;locus_tag=GCA000010485_02475;product=UPF0370 protein YpfN;Dbxref=GO:0005886;gene=ypfN;Parent=GCA000010485_02475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000383836.1,SO:0001217,UniParc:UPI00000B24F0,UniRef:UniRef100_Q2EET2,UniRef:UniRef50_Q2EET2,UniRef:UniRef90_Q2EET2
contig_1	Pyrodigal	gene	2522616	2523314	.	-	.	ID=GCA000010485_02476_gene;locus_tag=GCA000010485_02476;gene=ypfH
contig_1	Pyrodigal	CDS	2522616	2523314	.	-	0	ID=GCA000010485_02476;Name=esterase;locus_tag=GCA000010485_02476;product=esterase;Dbxref=GO:0016787,GO:0016788,GO:0106435;gene=ypfH;Parent=GCA000010485_02476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000679830.1,SO:0001217,UniParc:UPI0001C22BF3,UniRef:UniRef100_A0A066T7K7,UniRef:UniRef50_P76561,UniRef:UniRef90_P76561;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2523388	2525403	.	-	.	ID=GCA000010485_02477_gene;locus_tag=GCA000010485_02477;gene=tmcA
contig_1	Pyrodigal	CDS	2523388	2525403	.	-	0	ID=GCA000010485_02477;Name=tRNA cytosine(34) acetyltransferase TmcA;locus_tag=GCA000010485_02477;product=tRNA cytosine(34) acetyltransferase TmcA;Dbxref=GO:0000049,GO:0002101,GO:0005524,GO:0005737,GO:0051391,GO:0051392,GO:1904812,GO:1990883;gene=tmcA;Parent=GCA000010485_02477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000829360,BlastRules:WP_001279831,COG:COG1444,COG:J,RefSeq:WP_000829368.1,SO:0001217,UniParc:UPI0001C22BF4,UniRef:UniRef100_A0A7I0KZS5,UniRef:UniRef50_P76562,UniRef:UniRef90_P76562;ec_number=2.3.1.193
contig_1	Pyrodigal	gene	2525418	2526281	.	-	.	ID=GCA000010485_02478_gene;locus_tag=GCA000010485_02478;gene=ypfJ
contig_1	Pyrodigal	CDS	2525418	2526281	.	-	0	ID=GCA000010485_02478;Name=putative protein YpfJ;locus_tag=GCA000010485_02478;product=putative protein YpfJ;Dbxref=GO:0016020;gene=ypfJ;Parent=GCA000010485_02478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07054,RefSeq:WP_001267498.1,SO:0001217,UniParc:UPI000013BDCF,UniRef:UniRef100_P64429,UniRef:UniRef50_P64429,UniRef:UniRef90_P64429
contig_1	Pyrodigal	gene	2526449	2527162	.	-	.	ID=GCA000010485_02479_gene;locus_tag=GCA000010485_02479;gene=purC
contig_1	Pyrodigal	CDS	2526449	2527162	.	-	0	ID=GCA000010485_02479;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000010485_02479;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0005829,GO:0006164,GO:0006189,GO:0009236;gene=purC;Parent=GCA000010485_02479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0152,COG:F,RefSeq:WP_001295467.1,SO:0001217,UniParc:UPI0000132A8F,UniRef:UniRef100_P0A7D7,UniRef:UniRef50_P0A7D7,UniRef:UniRef90_P0A7D7;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	2527234	2527464	.	+	.	ID=GCA000010485_02480_gene;locus_tag=GCA000010485_02480
contig_1	Pyrodigal	CDS	2527234	2527464	.	+	0	ID=GCA000010485_02480;Name=hypothetical protein;locus_tag=GCA000010485_02480;product=hypothetical protein;Parent=GCA000010485_02480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000245EB91,UniRef:UniRef100_A0A0E2LHC7,UniRef:UniRef50_A0A0E2LHC7,UniRef:UniRef90_A0A0E2LHC7
contig_1	Pyrodigal	gene	2527375	2528409	.	-	.	ID=GCA000010485_02481_gene;locus_tag=GCA000010485_02481;gene=bamC
contig_1	Pyrodigal	CDS	2527375	2528409	.	-	0	ID=GCA000010485_02481;Name=outer membrane protein assembly factor BamC;locus_tag=GCA000010485_02481;product=outer membrane protein assembly factor BamC;Dbxref=GO:0009279,GO:0043165,GO:0051205;gene=bamC;Parent=GCA000010485_02481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3317,COG:M,KEGG:K07287,RefSeq:WP_001296286.1,SO:0001217,UniParc:UPI00005EFA0D,UniRef:UniRef100_E2QPV2,UniRef:UniRef50_P0A903,UniRef:UniRef90_P0A903
contig_1	Pyrodigal	gene	2528426	2529304	.	-	.	ID=GCA000010485_02482_gene;locus_tag=GCA000010485_02482;gene=dapA
contig_1	Pyrodigal	CDS	2528426	2529304	.	-	0	ID=GCA000010485_02482;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000010485_02482;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000010485_02482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_001295469.1,SO:0001217,UniParc:UPI0000128E46,UniRef:UniRef100_A7ZPS4,UniRef:UniRef50_P0A6L2,UniRef:UniRef90_P0A6L2;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	2529450	2530022	.	+	.	ID=GCA000010485_02483_gene;locus_tag=GCA000010485_02483;gene=gcvR
contig_1	Pyrodigal	CDS	2529450	2530022	.	+	0	ID=GCA000010485_02483;Name=glycine cleavage system transcriptional repressor;locus_tag=GCA000010485_02483;product=glycine cleavage system transcriptional repressor;Dbxref=GO:0005737,GO:0006355;gene=gcvR;Parent=GCA000010485_02483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2716,COG:E,RefSeq:WP_000176187.1,SO:0001217,UniParc:UPI00001639E6,UniRef:UniRef100_P0A9I3,UniRef:UniRef50_P0A9I3,UniRef:UniRef90_P0A9I3
contig_1	Pyrodigal	gene	2530022	2530492	.	+	.	ID=GCA000010485_02484_gene;locus_tag=GCA000010485_02484;gene=bcp
contig_1	Pyrodigal	CDS	2530022	2530492	.	+	0	ID=GCA000010485_02484;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000010485_02484;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0005737,GO:0008379,GO:0016209,GO:0016491,GO:0034599,GO:0045454;gene=bcp;Parent=GCA000010485_02484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,KEGG:K03564,RefSeq:WP_001068682.1,SO:0001217,UniParc:UPI0000126840,UniRef:UniRef100_P0AE52,UniRef:UniRef50_P0AE52,UniRef:UniRef90_P0AE52;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	2530590	2531651	.	-	.	ID=GCA000010485_02485_gene;locus_tag=GCA000010485_02485;gene=perM
contig_1	Pyrodigal	CDS	2530590	2531651	.	-	0	ID=GCA000010485_02485;Name=Putative permease PerM;locus_tag=GCA000010485_02485;product=Putative permease PerM;Dbxref=GO:0005886,GO:0055085;gene=perM;Parent=GCA000010485_02485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,KEGG:K03548,RefSeq:WP_000892043.1,SO:0001217,UniParc:UPI0001C22C25,UniRef:UniRef100_A0A061YN13,UniRef:UniRef50_P0AFI9,UniRef:UniRef90_P0AFI9
contig_1	Pyrodigal	gene	2531864	2533327	.	+	.	ID=GCA000010485_02486_gene;locus_tag=GCA000010485_02486;gene=bepA
contig_1	Pyrodigal	CDS	2531864	2533327	.	+	0	ID=GCA000010485_02486;Name=beta-barrel assembly-enhancing protease;locus_tag=GCA000010485_02486;product=beta-barrel assembly-enhancing protease;Dbxref=GO:0003756,GO:0004222,GO:0008270,GO:0016020,GO:0030288,GO:0043165,GO:0046872,GO:0051603,GO:0061077;gene=bepA;Parent=GCA000010485_02486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000489630,COG:COG4783,COG:MO,KEGG:K01423,RefSeq:WP_000489665.1,SO:0001217,UniParc:UPI0001887555,UniRef:UniRef100_A0A023KM27,UniRef:UniRef50_P66948,UniRef:UniRef90_P66948;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	2533348	2533707	.	+	.	ID=GCA000010485_02487_gene;locus_tag=GCA000010485_02487;gene=arsC
contig_1	Pyrodigal	CDS	2533348	2533707	.	+	0	ID=GCA000010485_02487;Name=arsenate reductase (glutaredoxin);locus_tag=GCA000010485_02487;product=arsenate reductase (glutaredoxin);Dbxref=GO:0005829,GO:0008794,GO:0046685;gene=arsC;Parent=GCA000010485_02487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_000166449.1,SO:0001217,UniParc:UPI00000D0707,UniRef:UniRef100_C3T062,UniRef:UniRef50_P76569,UniRef:UniRef90_P76569;ec_number=1.20.4.1
contig_1	Pyrodigal	gene	2533845	2534591	.	-	.	ID=GCA000010485_02488_gene;locus_tag=GCA000010485_02488;gene=hda
contig_1	Pyrodigal	CDS	2533845	2534591	.	-	0	ID=GCA000010485_02488;Name=DnaA inactivator Hda;locus_tag=GCA000010485_02488;product=DnaA inactivator Hda;Dbxref=GO:0006270,GO:0032297;gene=hda;Parent=GCA000010485_02488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K10763,RefSeq:WP_000247065.1,SO:0001217,UniParc:UPI000013AE7A,UniRef:UniRef100_C3T057,UniRef:UniRef50_P69931,UniRef:UniRef90_P69931
contig_1	Pyrodigal	gene	2534641	2535930	.	-	.	ID=GCA000010485_02489_gene;locus_tag=GCA000010485_02489;gene=uraA
contig_1	Pyrodigal	CDS	2534641	2535930	.	-	0	ID=GCA000010485_02489;Name=uracil permease;locus_tag=GCA000010485_02489;product=uracil permease;Dbxref=GO:0005886,GO:0015210,GO:0015505,GO:0015857,GO:0016020,GO:0022857,GO:0042803,GO:0098721;gene=uraA;Parent=GCA000010485_02489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,KEGG:K02824,RefSeq:WP_000198327.1,SO:0001217,UniParc:UPI00005EFA11,UniRef:UniRef100_E2QPW0,UniRef:UniRef50_P0AGM7,UniRef:UniRef90_P0AGM7
contig_1	Pyrodigal	gene	2536016	2536642	.	-	.	ID=GCA000010485_02490_gene;locus_tag=GCA000010485_02490;gene=upp
contig_1	Pyrodigal	CDS	2536016	2536642	.	-	0	ID=GCA000010485_02490;Name=uracil phosphoribosyltransferase;locus_tag=GCA000010485_02490;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000010485_02490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_001295473.1,SO:0001217,UniParc:UPI0000137D1F,UniRef:UniRef100_P0A8F0,UniRef:UniRef50_P0A8F0,UniRef:UniRef90_P0A8F0;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	2536967	2538004	.	+	.	ID=GCA000010485_02491_gene;locus_tag=GCA000010485_02491;gene=purM
contig_1	Pyrodigal	CDS	2536967	2538004	.	+	0	ID=GCA000010485_02491;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000010485_02491;product=Phosphoribosylformylglycinamidine cyclo-ligase;Dbxref=GO:0004637,GO:0004641,GO:0005524,GO:0005829,GO:0006164,GO:0006189,GO:0046084;gene=purM;Parent=GCA000010485_02491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_001296287.1,SO:0001217,UniParc:UPI0000DACF41,UniRef:UniRef100_Q0TEY9,UniRef:UniRef50_P08178,UniRef:UniRef90_P08178;ec_number=6.3.3.1
contig_1	Pyrodigal	gene	2538004	2538642	.	+	.	ID=GCA000010485_02492_gene;locus_tag=GCA000010485_02492;gene=purN
contig_1	Pyrodigal	CDS	2538004	2538642	.	+	0	ID=GCA000010485_02492;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000010485_02492;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0004644,GO:0005737,GO:0005829,GO:0006189,GO:0006974;gene=purN;Parent=GCA000010485_02492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0299,COG:F,RefSeq:WP_001028626.1,SO:0001217,UniParc:UPI00000B7364,UniRef:UniRef100_Q9ETH9,UniRef:UniRef50_P08179,UniRef:UniRef90_P08179;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	2538814	2540880	.	+	.	ID=GCA000010485_02493_gene;locus_tag=GCA000010485_02493;gene=ppk1
contig_1	Pyrodigal	CDS	2538814	2540880	.	+	0	ID=GCA000010485_02493;Name=polyphosphate kinase 1;locus_tag=GCA000010485_02493;product=polyphosphate kinase 1;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006799,GO:0008976,GO:0009358,GO:0016776,GO:0016778,GO:0031241,GO:0042803,GO:0043751,GO:0046872;gene=ppk1;Parent=GCA000010485_02493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0855,COG:P,RefSeq:WP_001296288.1,SO:0001217,UniParc:UPI00005EFA12,UniRef:UniRef100_Q8FF70,UniRef:UniRef50_P0A7B1,UniRef:UniRef90_P0A7B1;ec_number=2.7.4.1
contig_1	Pyrodigal	gene	2540885	2542426	.	+	.	ID=GCA000010485_02494_gene;locus_tag=GCA000010485_02494;gene=ppx
contig_1	Pyrodigal	CDS	2540885	2542426	.	+	0	ID=GCA000010485_02494;Name=exopolyphosphatase;locus_tag=GCA000010485_02494;product=exopolyphosphatase;Dbxref=GO:0000287,GO:0004309,GO:0005886,GO:0006798;gene=ppx;Parent=GCA000010485_02494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0248,COG:FT,KEGG:K01524,RefSeq:WP_001121363.1,SO:0001217,UniParc:UPI00001654BF,UniRef:UniRef100_P0AFL6,UniRef:UniRef50_P0AFL6,UniRef:UniRef90_P0AFL6;ec_number=3.6.1.11
contig_1	Pyrodigal	gene	2542465	2544708	.	-	.	ID=GCA000010485_02495_gene;locus_tag=GCA000010485_02495;gene=pdeF
contig_1	Pyrodigal	CDS	2542465	2544708	.	-	0	ID=GCA000010485_02495;Name=cyclic-guanylate-specific phosphodiesterase PdeF;locus_tag=GCA000010485_02495;product=cyclic-guanylate-specific phosphodiesterase PdeF;Dbxref=GO:0000166,GO:0005886,GO:0016020,GO:0042803,GO:0070301,GO:0071111,GO:0071454,GO:1900190;gene=pdeF;Parent=GCA000010485_02495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000772731,KEGG:K26149,RefSeq:WP_000772719.1,SO:0001217,UniParc:UPI0001C22C26,UniRef:UniRef100_A0A7I0KZQ6,UniRef:UniRef50_P77172,UniRef:UniRef90_P77172;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	2544890	2545042	.	-	.	ID=GCA000010485_02496_gene;locus_tag=GCA000010485_02496
contig_1	Pyrodigal	CDS	2544890	2545042	.	-	0	ID=GCA000010485_02496;Name=Transposase;locus_tag=GCA000010485_02496;product=Transposase;Parent=GCA000010485_02496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000017548.1,SO:0001217,UniParc:UPI000218586B,UniRef:UniRef100_A0A066T7I5,UniRef:UniRef50_A0A0J2BC76,UniRef:UniRef90_A0A0J2BC76
contig_1	Pyrodigal	gene	2545078	2545251	.	+	.	ID=GCA000010485_02497_gene;locus_tag=GCA000010485_02497;gene=yfgG
contig_1	Pyrodigal	CDS	2545078	2545251	.	+	0	ID=GCA000010485_02497;Name=putative protein YfgG;locus_tag=GCA000010485_02497;product=putative protein YfgG;Dbxref=GO:0016020;gene=yfgG;Parent=GCA000010485_02497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001344399.1,SO:0001217,UniParc:UPI0001B5AFE1,UniRef:UniRef100_P64545,UniRef:UniRef50_P64545,UniRef:UniRef90_P64545
contig_1	Pyrodigal	gene	2545556	2546071	.	+	.	ID=GCA000010485_02498_gene;locus_tag=GCA000010485_02498;gene=yfgH
contig_1	Pyrodigal	CDS	2545556	2546071	.	+	0	ID=GCA000010485_02498;Name=putative lipoprotein YfgH;locus_tag=GCA000010485_02498;product=putative lipoprotein YfgH;Dbxref=GO:0005886,GO:0009279;gene=yfgH;Parent=GCA000010485_02498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3133,COG:M,KEGG:K06077,RefSeq:WP_000669398.1,SO:0001217,UniParc:UPI0000DACF42,UniRef:UniRef100_A0A1V2FI87,UniRef:UniRef50_P65290,UniRef:UniRef90_P65290
contig_1	Pyrodigal	gene	2546087	2546626	.	+	.	ID=GCA000010485_02499_gene;locus_tag=GCA000010485_02499;gene=yfgI
contig_1	Pyrodigal	CDS	2546087	2546626	.	+	0	ID=GCA000010485_02499;Name=putative protein YfgI;locus_tag=GCA000010485_02499;product=putative protein YfgI;Dbxref=GO:0006974;gene=yfgI;Parent=GCA000010485_02499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755178.1,SO:0001217,UniParc:UPI000000E488,UniRef:UniRef100_C3T007,UniRef:UniRef50_P76573,UniRef:UniRef90_P76573
contig_1	Pyrodigal	gene	2546719	2548296	.	-	.	ID=GCA000010485_02500_gene;locus_tag=GCA000010485_02500;gene=guaA
contig_1	Pyrodigal	CDS	2546719	2548296	.	-	0	ID=GCA000010485_02500;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000010485_02500;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA000010485_02500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,RefSeq:WP_000138282.1,SO:0001217,UniParc:UPI000012BD5B,UniRef:UniRef100_B7MHY8,UniRef:UniRef50_Q9RT91,UniRef:UniRef90_Q8ZN60;ec_number=6.3.5.2
contig_1	Pyrodigal	gene	2548365	2549831	.	-	.	ID=GCA000010485_02501_gene;locus_tag=GCA000010485_02501;gene=guaB
contig_1	Pyrodigal	CDS	2548365	2549831	.	-	0	ID=GCA000010485_02501;Name=IMP dehydrogenase;locus_tag=GCA000010485_02501;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872;gene=guaB;Parent=GCA000010485_02501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0516,COG:F,KEGG:K00088,RefSeq:WP_001296289.1,SO:0001217,UniParc:UPI00005EFA16,UniRef:UniRef100_E2QPX1,UniRef:UniRef50_P0ADG7,UniRef:UniRef90_P0ADG7;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	2549993	2551360	.	+	.	ID=GCA000010485_02502_gene;locus_tag=GCA000010485_02502;gene=xseA
contig_1	Pyrodigal	CDS	2549993	2551360	.	+	0	ID=GCA000010485_02502;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000010485_02502;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA000010485_02502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_000937875.1,SO:0001217,UniParc:UPI0001C22C28,UniRef:UniRef100_A0A3L4BVG7,UniRef:UniRef50_P04994,UniRef:UniRef90_P04994;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	2551414	2559495	.	-	.	ID=GCA000010485_02503_gene;locus_tag=GCA000010485_02503
contig_1	Pyrodigal	CDS	2551414	2559495	.	-	0	ID=GCA000010485_02503;Name=DUF823 domain-containing protein;locus_tag=GCA000010485_02503;product=DUF823 domain-containing protein;Parent=GCA000010485_02503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000109687.1,SO:0001217,UniParc:UPI0001C22C29,UniRef:UniRef100_A0A066SZ68,UniRef:UniRef50_B7LKD1,UniRef:UniRef90_A0AAX4LFE8
contig_1	Pyrodigal	gene	2559605	2560597	.	-	.	ID=GCA000010485_02504_gene;locus_tag=GCA000010485_02504
contig_1	Pyrodigal	CDS	2559605	2560597	.	-	0	ID=GCA000010485_02504;Name=SinI-like outer membrane protein;locus_tag=GCA000010485_02504;product=SinI-like outer membrane protein;Parent=GCA000010485_02504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000802329.1,SO:0001217,UniParc:UPI0001C22C2A,UniRef:UniRef100_A0A066SZH9,UniRef:UniRef50_B7LKD0,UniRef:UniRef90_B7LKD0
contig_1	Pyrodigal	gene	2560653	2562827	.	-	.	ID=GCA000010485_02505_gene;locus_tag=GCA000010485_02505;gene=sinH
contig_1	Pyrodigal	CDS	2560653	2562827	.	-	0	ID=GCA000010485_02505;Name=intimin-like inverse autotransporter SinH;locus_tag=GCA000010485_02505;product=intimin-like inverse autotransporter SinH;gene=sinH;Parent=GCA000010485_02505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIFam:NF033423.1,RefSeq:WP_001531885.1,SO:0001217,UniParc:UPI0001C22C2B,UniRef:UniRef100_A0A066T7P2,UniRef:UniRef50_G9Y5J8,UniRef:UniRef90_A0A066T7P2
contig_1	Pyrodigal	gene	2563033	2563248	.	-	.	ID=GCA000010485_02506_gene;locus_tag=GCA000010485_02506
contig_1	Pyrodigal	CDS	2563033	2563248	.	-	0	ID=GCA000010485_02506;Name=Zinc ribbon domain-containing protein;locus_tag=GCA000010485_02506;product=Zinc ribbon domain-containing protein;Parent=GCA000010485_02506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001196896.1,SO:0001217,UniParc:UPI0001888F68,UniRef:UniRef100_A0A023L065,UniRef:UniRef50_A0A090VPU8,UniRef:UniRef90_D3H3M0
contig_1	Pyrodigal	gene	2563311	2564783	.	-	.	ID=GCA000010485_02507_gene;locus_tag=GCA000010485_02507;gene=der
contig_1	Pyrodigal	CDS	2563311	2564783	.	-	0	ID=GCA000010485_02507;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000010485_02507;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=der;Parent=GCA000010485_02507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,KEGG:K03977,RefSeq:WP_001296291.1,SO:0001217,UniParc:UPI00001A9602,UniRef:UniRef100_Q8FF59,UniRef:UniRef50_P0A6P5,UniRef:UniRef90_P0A6P5;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2564901	2566079	.	-	.	ID=GCA000010485_02508_gene;locus_tag=GCA000010485_02508;gene=bamB
contig_1	Pyrodigal	CDS	2564901	2566079	.	-	0	ID=GCA000010485_02508;Name=outer membrane protein assembly factor BamB;locus_tag=GCA000010485_02508;product=outer membrane protein assembly factor BamB;Dbxref=GO:0005515,GO:0009279,GO:0043165,GO:0051205;gene=bamB;Parent=GCA000010485_02508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1520,COG:M,RefSeq:WP_001177062.1,SO:0001217,UniParc:UPI00005EF978,UniRef:UniRef100_A0A066SZ64,UniRef:UniRef50_P77774,UniRef:UniRef90_P77774
contig_1	Pyrodigal	gene	2566090	2566710	.	-	.	ID=GCA000010485_02509_gene;locus_tag=GCA000010485_02509;gene=yfgM
contig_1	Pyrodigal	CDS	2566090	2566710	.	-	0	ID=GCA000010485_02509;Name=ancillary SecYEG translocon subunit YfgM;locus_tag=GCA000010485_02509;product=ancillary SecYEG translocon subunit YfgM;Dbxref=GO:0005886,GO:0044877;gene=yfgM;Parent=GCA000010485_02509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000409205,COG:COG2976,COG:T,RefSeq:WP_000409203.1,SO:0001217,UniParc:UPI00000DEE86,UniRef:UniRef100_E2QPX9,UniRef:UniRef50_P76576,UniRef:UniRef90_P76576
contig_1	Pyrodigal	gene	2566728	2568002	.	-	.	ID=GCA000010485_02510_gene;locus_tag=GCA000010485_02510;gene=hisS
contig_1	Pyrodigal	CDS	2566728	2568002	.	-	0	ID=GCA000010485_02510;Name=histidine--tRNA ligase;locus_tag=GCA000010485_02510;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427;gene=hisS;Parent=GCA000010485_02510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_001107179.1,SO:0001217,UniParc:UPI000187BF13,UniRef:UniRef100_B7UGW0,UniRef:UniRef50_P60906,UniRef:UniRef90_P60906;ec_number=6.1.1.21
contig_1	Infernal	gene	2568022	2568113	.	-	.	ID=GCA000010485_02511_gene;locus_tag=GCA000010485_02511;gene=sroE
contig_1	Infernal	ncRNA	2568022	2568113	2.4e-22	-	.	ID=GCA000010485_02511;Name=sroE RNA;locus_tag=GCA000010485_02511;gene=sroE;product=sroE RNA;Dbxref=RFAM:RF00371;Parent=GCA000010485_02511_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00371
contig_1	Pyrodigal	gene	2568113	2569231	.	-	.	ID=GCA000010485_02512_gene;locus_tag=GCA000010485_02512;gene=ispG
contig_1	Pyrodigal	CDS	2568113	2569231	.	-	0	ID=GCA000010485_02512;Name=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;locus_tag=GCA000010485_02512;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;Dbxref=GO:0005506,GO:0008152,GO:0016114,GO:0019288,GO:0046429,GO:0051539,GO:0141197;gene=ispG;Parent=GCA000010485_02512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0821,COG:I,KEGG:K03526,RefSeq:WP_000551807.1,SO:0001217,UniParc:UPI00000350B5,UniRef:UniRef100_P62620,UniRef:UniRef50_P62620,UniRef:UniRef90_P62620;ec_number=1.17.7.3
contig_1	Pyrodigal	gene	2569258	2570265	.	-	.	ID=GCA000010485_02513_gene;locus_tag=GCA000010485_02513;gene=rodZ
contig_1	Pyrodigal	CDS	2569258	2570265	.	-	0	ID=GCA000010485_02513;Name=cytoskeleton protein RodZ;locus_tag=GCA000010485_02513;product=cytoskeleton protein RodZ;Dbxref=GO:0003677,GO:0005886,GO:0008360,GO:0016020;gene=rodZ;Parent=GCA000010485_02513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15539,RefSeq:WP_001090837.1,SO:0001217,UniParc:UPI0001C22C4C,UniRef:UniRef100_A0A061YMH5,UniRef:UniRef50_P27434,UniRef:UniRef90_Q8FF56
contig_1	Pyrodigal	gene	2570550	2571704	.	-	.	ID=GCA000010485_02514_gene;locus_tag=GCA000010485_02514;gene=rlmN
contig_1	Pyrodigal	CDS	2570550	2571704	.	-	0	ID=GCA000010485_02514;Name=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;locus_tag=GCA000010485_02514;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0019843,GO:0030488,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000010485_02514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,RefSeq:WP_000003317.1,SO:0001217,UniParc:UPI00000350B7,UniRef:UniRef100_P36979,UniRef:UniRef50_P36979,UniRef:UniRef90_P36979;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	2571854	2572285	.	-	.	ID=GCA000010485_02515_gene;locus_tag=GCA000010485_02515;gene=ndk
contig_1	Pyrodigal	CDS	2571854	2572285	.	-	0	ID=GCA000010485_02515;Name=nucleoside-diphosphate kinase;locus_tag=GCA000010485_02515;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550,GO:0005524,GO:0005737,GO:0006163,GO:0006183,GO:0006220,GO:0006228,GO:0006241,GO:0046872;gene=ndk;Parent=GCA000010485_02515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_000963841.1,SO:0001217,UniParc:UPI00000DEE8A,UniRef:UniRef100_B7MI03,UniRef:UniRef50_P0A763,UniRef:UniRef90_P0A763;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	2572434	2574710	.	-	.	ID=GCA000010485_02516_gene;locus_tag=GCA000010485_02516;gene=pbpC
contig_1	Pyrodigal	CDS	2572434	2574710	.	-	0	ID=GCA000010485_02516;Name=peptidoglycan glycosyltransferase PbpC;locus_tag=GCA000010485_02516;product=peptidoglycan glycosyltransferase PbpC;Dbxref=GO:0008658,GO:0008955,GO:0009252;gene=pbpC;Parent=GCA000010485_02516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05367,SO:0001217,UniRef:UniRef50_P76577,UniRef:UniRef90_A0A426PB14;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	2574747	2579708	.	-	.	ID=GCA000010485_02517_gene;locus_tag=GCA000010485_02517;gene=yfhM
contig_1	Pyrodigal	CDS	2574747	2579708	.	-	0	ID=GCA000010485_02517;Name=alpha2-macroglobulin;locus_tag=GCA000010485_02517;product=alpha2-macroglobulin;Dbxref=GO:0004866,GO:0005615,GO:0005886,GO:0006952,GO:0042803;gene=yfhM;Parent=GCA000010485_02517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000736312,RefSeq:WP_000736347.1,SO:0001217,UniParc:UPI0001C22C4E,UniRef:UniRef100_A0A061YEE7,UniRef:UniRef50_P76578,UniRef:UniRef90_P76578
contig_1	Pyrodigal	gene	2579915	2580760	.	+	.	ID=GCA000010485_02518_gene;locus_tag=GCA000010485_02518;gene=sseA
contig_1	Pyrodigal	CDS	2579915	2580760	.	+	0	ID=GCA000010485_02518;Name=3-mercaptopyruvate sulfurtransferase;locus_tag=GCA000010485_02518;product=3-mercaptopyruvate sulfurtransferase;Dbxref=GO:0004792,GO:0005829,GO:0006979,GO:0016784,GO:0042262,GO:0046677;gene=sseA;Parent=GCA000010485_02518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2897,COG:P,RefSeq:WP_000108615.1,SO:0001217,UniParc:UPI0001C22C4F,UniRef:UniRef100_A0A061YMH0,UniRef:UniRef50_P31142,UniRef:UniRef90_P31142;ec_number=2.8.1.2
contig_1	Infernal	gene	2580950	2581254	.	+	.	ID=GCA000010485_02519_gene;locus_tag=GCA000010485_02519;gene=ryfA
contig_1	Infernal	ncRNA	2580950	2581254	2.4e-43	+	.	ID=GCA000010485_02519;Name=ryfA RNA;locus_tag=GCA000010485_02519;gene=ryfA;product=ryfA RNA;Dbxref=RFAM:RF00126;Parent=GCA000010485_02519_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00126
contig_1	Pyrodigal	gene	2581253	2582029	.	-	.	ID=GCA000010485_02520_gene;locus_tag=GCA000010485_02520;gene=sseB
contig_1	Pyrodigal	CDS	2581253	2582029	.	-	0	ID=GCA000010485_02520;Name=enhanced serine sensitivity protein SseB;locus_tag=GCA000010485_02520;product=enhanced serine sensitivity protein SseB;gene=sseB;Parent=GCA000010485_02520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296292.1,SO:0001217,UniParc:UPI0002A2842A,UniRef:UniRef100_A0A061YKP4,UniRef:UniRef50_P0AFZ1,UniRef:UniRef90_P0AFZ1
contig_1	Pyrodigal	gene	2582171	2583454	.	-	.	ID=GCA000010485_02521_gene;locus_tag=GCA000010485_02521;gene=pepB
contig_1	Pyrodigal	CDS	2582171	2583454	.	-	0	ID=GCA000010485_02521;Name=aminopeptidase PepB;locus_tag=GCA000010485_02521;product=aminopeptidase PepB;Dbxref=GO:0005737,GO:0006508,GO:0019538,GO:0030145,GO:0070006;gene=pepB;Parent=GCA000010485_02521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_000133610.1,SO:0001217,UniParc:UPI0001C22C51,UniRef:UniRef100_A0A061YLR7,UniRef:UniRef50_P37095,UniRef:UniRef90_P37095;ec_number=3.4.11.23
contig_1	Pyrodigal	gene	2583513	2583713	.	-	.	ID=GCA000010485_02522_gene;locus_tag=GCA000010485_02522;gene=iscX
contig_1	Pyrodigal	CDS	2583513	2583713	.	-	0	ID=GCA000010485_02522;Name=Fe-S cluster assembly protein IscX;locus_tag=GCA000010485_02522;product=Fe-S cluster assembly protein IscX;Dbxref=GO:0005506,GO:0005829,GO:0008198,GO:0016226;gene=iscX;Parent=GCA000010485_02522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000523612.1,SO:0001217,UniParc:UPI00000DEE91,UniRef:UniRef100_Q8FF46,UniRef:UniRef50_Q8FF46,UniRef:UniRef90_Q8FF46
contig_1	Pyrodigal	gene	2583725	2584060	.	-	.	ID=GCA000010485_02523_gene;locus_tag=GCA000010485_02523;gene=fdx
contig_1	Pyrodigal	CDS	2583725	2584060	.	-	0	ID=GCA000010485_02523;Name=ISC system 2Fe-2S type ferredoxin;locus_tag=GCA000010485_02523;product=ISC system 2Fe-2S type ferredoxin;Dbxref=GO:0005829,GO:0009055,GO:0016226,GO:0022900,GO:0046872,GO:0051537,GO:0140647;gene=fdx;Parent=GCA000010485_02523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0633,RefSeq:WP_001124471.1,SO:0001217,UniParc:UPI00005EF972,UniRef:UniRef100_E2QPZ1,UniRef:UniRef50_P0A9R4,UniRef:UniRef90_P0A9R4
contig_1	Pyrodigal	gene	2584062	2585912	.	-	.	ID=GCA000010485_02524_gene;locus_tag=GCA000010485_02524;gene=hscA
contig_1	Pyrodigal	CDS	2584062	2585912	.	-	0	ID=GCA000010485_02524;Name=Fe-S protein assembly chaperone HscA;locus_tag=GCA000010485_02524;product=Fe-S protein assembly chaperone HscA;Dbxref=GO:0005515,GO:0005524,GO:0006457,GO:0016226,GO:0016887,GO:0051082,GO:0140662;gene=hscA;Parent=GCA000010485_02524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_001196613.1,SO:0001217,UniParc:UPI000012CCD8,UniRef:UniRef100_P0A6Z1,UniRef:UniRef50_P0A6Z1,UniRef:UniRef90_P0A6Z1;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	2585929	2586444	.	-	.	ID=GCA000010485_02525_gene;locus_tag=GCA000010485_02525;gene=hscB
contig_1	Pyrodigal	CDS	2585929	2586444	.	-	0	ID=GCA000010485_02525;Name=co-chaperone HscB;locus_tag=GCA000010485_02525;product=co-chaperone HscB;Dbxref=GO:0001671,GO:0006457,GO:0044571,GO:0051087,GO:0051259,GO:0097428,GO:1990230;gene=hscB;Parent=GCA000010485_02525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_000384413.1,SO:0001217,UniParc:UPI000012CCDD,UniRef:UniRef100_P0A6L9,UniRef:UniRef50_P0A6L9,UniRef:UniRef90_P0A6L9
contig_1	Pyrodigal	gene	2586540	2586863	.	-	.	ID=GCA000010485_02526_gene;locus_tag=GCA000010485_02526;gene=iscA
contig_1	Pyrodigal	CDS	2586540	2586863	.	-	0	ID=GCA000010485_02526;Name=iron-sulfur cluster assembly protein IscA;locus_tag=GCA000010485_02526;product=iron-sulfur cluster assembly protein IscA;Dbxref=GO:0005506,GO:0005829,GO:0016226,GO:0051537,GO:0097428;gene=iscA;Parent=GCA000010485_02526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,KEGG:K05997,RefSeq:WP_000028953.1,SO:0001217,UniParc:UPI000013AE93,UniRef:UniRef100_P0AAC8,UniRef:UniRef50_P0AAC8,UniRef:UniRef90_P0AAC8
contig_1	Pyrodigal	gene	2586880	2587266	.	-	.	ID=GCA000010485_02527_gene;locus_tag=GCA000010485_02527;gene=iscU
contig_1	Pyrodigal	CDS	2586880	2587266	.	-	0	ID=GCA000010485_02527;Name=Iron-sulfur cluster assembly scaffold protein IscU;locus_tag=GCA000010485_02527;product=Iron-sulfur cluster assembly scaffold protein IscU;Dbxref=GO:0005506,GO:0016226,GO:0051536;gene=iscU;Parent=GCA000010485_02527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_000331707.1,SO:0001217,UniParc:UPI0000130120,UniRef:UniRef100_P0ACD4,UniRef:UniRef50_P0ACD4,UniRef:UniRef90_P0ACD4
contig_1	Pyrodigal	gene	2587294	2588508	.	-	.	ID=GCA000010485_02528_gene;locus_tag=GCA000010485_02528;gene=iscS
contig_1	Pyrodigal	CDS	2587294	2588508	.	-	0	ID=GCA000010485_02528;Name=cysteine desulfurase;locus_tag=GCA000010485_02528;product=cysteine desulfurase;Dbxref=GO:0005737,GO:0030170,GO:0031071,GO:0044571,GO:0046872,GO:0051537;gene=iscS;Parent=GCA000010485_02528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295373,COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_001295373.1,SO:0001217,UniParc:UPI000003121D,UniRef:UniRef100_P0A6B7,UniRef:UniRef50_P0A6B7,UniRef:UniRef90_P0A6B7;ec_number=2.8.1.7
contig_1	Infernal	regulatory_region	2588510	2588619	9.1e-27	-	.	ID=EFPPCJGBKI_283;Name=iscR stability element;product=iscR stability element;Dbxref=RFAM:RF01517;inference=profile:Rfam:RF01517;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2588620	2589108	.	-	.	ID=GCA000010485_02529_gene;locus_tag=GCA000010485_02529;gene=iscR
contig_1	Pyrodigal	CDS	2588620	2589108	.	-	0	ID=GCA000010485_02529;Name=Fe-S cluster assembly transcriptional regulator IscR;locus_tag=GCA000010485_02529;product=Fe-S cluster assembly transcriptional regulator IscR;Dbxref=GO:0003690,GO:0003700,GO:0005506,GO:0005829,GO:0051537;gene=iscR;Parent=GCA000010485_02529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_001241357.1,SO:0001217,UniParc:UPI000013AE9A,UniRef:UniRef100_P0AGK8,UniRef:UniRef50_P0AGK8,UniRef:UniRef90_P0AGK8
contig_1	Pyrodigal	gene	2589379	2590119	.	-	.	ID=GCA000010485_02530_gene;locus_tag=GCA000010485_02530;gene=trmJ
contig_1	Pyrodigal	CDS	2589379	2590119	.	-	0	ID=GCA000010485_02530;Name=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;locus_tag=GCA000010485_02530;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;Dbxref=GO:0002128,GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0160206;gene=trmJ;Parent=GCA000010485_02530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0565,COG:J,KEGG:K15396,RefSeq:WP_000940013.1,SO:0001217,UniParc:UPI0001C22C52,UniRef:UniRef100_A0A7I0KZR0,UniRef:UniRef50_P0AE01,UniRef:UniRef90_P0AE01;ec_number=2.1.1.200
contig_1	Pyrodigal	gene	2590238	2591041	.	+	.	ID=GCA000010485_02531_gene;locus_tag=GCA000010485_02531;gene=suhB
contig_1	Pyrodigal	CDS	2590238	2591041	.	+	0	ID=GCA000010485_02531;Name=inositol-1-monophosphatase;locus_tag=GCA000010485_02531;product=inositol-1-monophosphatase;Dbxref=GO:0000287,GO:0001072,GO:0005737,GO:0005829,GO:0006020,GO:0007165,GO:0008934,GO:0031403,GO:0031564,GO:0042134,GO:0042254,GO:0046854,GO:0047954,GO:0052832;gene=suhB;Parent=GCA000010485_02531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,RefSeq:WP_000553451.1,SO:0001217,UniParc:UPI00001361DA,UniRef:UniRef100_P0ADG4,UniRef:UniRef50_P0ADG4,UniRef:UniRef90_P0ADG4;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	2591186	2592040	.	+	.	ID=GCA000010485_02532_gene;locus_tag=GCA000010485_02532;gene=yhfR
contig_1	Pyrodigal	CDS	2591186	2592040	.	+	0	ID=GCA000010485_02532;Name=putative protein YfhR;locus_tag=GCA000010485_02532;product=putative protein YfhR;Dbxref=GO:0016020;gene=yhfR;Parent=GCA000010485_02532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1073,COG:T,RefSeq:WP_001296293.1,SO:0001217,UniParc:UPI0001C22C53,UniRef:UniRef100_A0A066T383,UniRef:UniRef50_P77538,UniRef:UniRef90_P77538
contig_1	Pyrodigal	gene	2592231	2593511	.	+	.	ID=GCA000010485_02533_gene;locus_tag=GCA000010485_02533;gene=csiE
contig_1	Pyrodigal	CDS	2592231	2593511	.	+	0	ID=GCA000010485_02533;Name=stationary phase inducible protein CsiE;locus_tag=GCA000010485_02533;product=stationary phase inducible protein CsiE;gene=csiE;Parent=GCA000010485_02533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000983028.1,SO:0001217,UniParc:UPI0001C22C54,UniRef:UniRef100_A0A066SZ36,UniRef:UniRef50_P54901,UniRef:UniRef90_A0A454A6L8
contig_1	Pyrodigal	gene	2593503	2594642	.	-	.	ID=GCA000010485_02534_gene;locus_tag=GCA000010485_02534;gene=hcaT
contig_1	Pyrodigal	CDS	2593503	2594642	.	-	0	ID=GCA000010485_02534;Name=3-phenylpropionate MFS transporter;locus_tag=GCA000010485_02534;product=3-phenylpropionate MFS transporter;Dbxref=GO:0005886,GO:0015528,GO:0030395;gene=hcaT;Parent=GCA000010485_02534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05820,RefSeq:WP_000244186.1,SO:0001217,UniParc:UPI00005EF96D,UniRef:UniRef100_E2QQ02,UniRef:UniRef50_Q47142,UniRef:UniRef90_Q47142
contig_1	Pyrodigal	gene	2595012	2595434	.	+	.	ID=GCA000010485_02535_gene;locus_tag=GCA000010485_02535;gene=yphA
contig_1	Pyrodigal	CDS	2595012	2595434	.	+	0	ID=GCA000010485_02535;Name=Inner membrane protein YphA;locus_tag=GCA000010485_02535;product=Inner membrane protein YphA;gene=yphA;Parent=GCA000010485_02535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296295.1,SO:0001217,UniParc:UPI0001F919FD,UniRef:UniRef100_A0A061YKN3,UniRef:UniRef50_P0AD47,UniRef:UniRef90_A0AA36P7P3
contig_1	Pyrodigal	gene	2595482	2596354	.	-	.	ID=GCA000010485_02536_gene;locus_tag=GCA000010485_02536;gene=yphB
contig_1	Pyrodigal	CDS	2595482	2596354	.	-	0	ID=GCA000010485_02536;Name=putative protein YphB;locus_tag=GCA000010485_02536;product=putative protein YphB;Dbxref=GO:0004034,GO:0006006,GO:0006974,GO:0030246,GO:0033499;gene=yphB;Parent=GCA000010485_02536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000158510.1,SO:0001217,UniParc:UPI0001C22C56,UniRef:UniRef100_A0A061YLQ5,UniRef:UniRef50_P76584,UniRef:UniRef90_P76584
contig_1	Pyrodigal	gene	2596366	2597427	.	-	.	ID=GCA000010485_02537_gene;locus_tag=GCA000010485_02537;gene=yphC
contig_1	Pyrodigal	CDS	2596366	2597427	.	-	0	ID=GCA000010485_02537;Name=putative zinc-type alcohol dehydrogenase-like protein YphC;locus_tag=GCA000010485_02537;product=putative zinc-type alcohol dehydrogenase-like protein YphC;Dbxref=GO:0008270,GO:0016616;gene=yphC;Parent=GCA000010485_02537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_001393448.1,SO:0001217,UniParc:UPI000013BDE3,UniRef:UniRef100_P77360,UniRef:UniRef50_P77360,UniRef:UniRef90_P77360;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2597493	2598491	.	-	.	ID=GCA000010485_02538_gene;locus_tag=GCA000010485_02538;gene=yphD
contig_1	Pyrodigal	CDS	2597493	2598491	.	-	0	ID=GCA000010485_02538;Name=putative ABC transporter permease protein YphD;locus_tag=GCA000010485_02538;product=putative ABC transporter permease protein YphD;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0043190,GO:0055052,GO:0055085;gene=yphD;Parent=GCA000010485_02538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_001276666.1,SO:0001217,UniParc:UPI0001C22C57,UniRef:UniRef100_A0A135Y004,UniRef:UniRef50_P77315,UniRef:UniRef90_P77315
contig_1	Pyrodigal	gene	2598494	2600023	.	-	.	ID=GCA000010485_02539_gene;locus_tag=GCA000010485_02539;gene=ccmA
contig_1	Pyrodigal	CDS	2598494	2600023	.	-	0	ID=GCA000010485_02539;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA000010485_02539;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0005524,GO:0015439,GO:0015886,GO:0016020,GO:0016887,GO:0017004,GO:0022857,GO:0043190,GO:0055052,GO:0055085;gene=ccmA;Parent=GCA000010485_02539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23547,RefSeq:WP_000493440.1,SO:0001217,UniParc:UPI0001C22C58,UniRef:UniRef100_A0A061L6F2,UniRef:UniRef50_P77509,UniRef:UniRef90_P77509;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	2600046	2601029	.	-	.	ID=GCA000010485_02540_gene;locus_tag=GCA000010485_02540;gene=yphF
contig_1	Pyrodigal	CDS	2600046	2601029	.	-	0	ID=GCA000010485_02540;Name=ABC transporter periplasmic-binding protein YphF;locus_tag=GCA000010485_02540;product=ABC transporter periplasmic-binding protein YphF;Dbxref=GO:0016020,GO:0030246,GO:0030288,GO:0055052,GO:0055085;gene=yphF;Parent=GCA000010485_02540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001124928.1,SO:0001217,UniParc:UPI0001C22C59,UniRef:UniRef100_A0A061YKM9,UniRef:UniRef50_P77269,UniRef:UniRef90_P77269
contig_1	Pyrodigal	gene	2601126	2604407	.	-	.	ID=GCA000010485_02541_gene;locus_tag=GCA000010485_02541;gene=yphG
contig_1	Pyrodigal	CDS	2601126	2604407	.	-	0	ID=GCA000010485_02541;Name=putative protein YphG;locus_tag=GCA000010485_02541;product=putative protein YphG;Dbxref=GO:0030246;gene=yphG;Parent=GCA000010485_02541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296296.1,SO:0001217,UniParc:UPI0002185899,UniRef:UniRef100_A0A061YLQ2,UniRef:UniRef50_P76585,UniRef:UniRef90_P76585
contig_1	Pyrodigal	gene	2604525	2605718	.	+	.	ID=GCA000010485_02542_gene;locus_tag=GCA000010485_02542;gene=yphH
contig_1	Pyrodigal	CDS	2604525	2605718	.	+	0	ID=GCA000010485_02542;Name=putative protein YphH;locus_tag=GCA000010485_02542;product=putative protein YphH;Dbxref=GO:0003677,GO:0006351;gene=yphH;Parent=GCA000010485_02542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_001296297.1,SO:0001217,UniParc:UPI0001C22C5B,UniRef:UniRef100_A0A066T370,UniRef:UniRef50_P76586,UniRef:UniRef90_P76586
contig_1	Pyrodigal	gene	2605782	2607035	.	-	.	ID=GCA000010485_02543_gene;locus_tag=GCA000010485_02543;gene=glyA
contig_1	Pyrodigal	CDS	2605782	2607035	.	-	0	ID=GCA000010485_02543;Name=serine hydroxymethyltransferase;locus_tag=GCA000010485_02543;product=serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005737,GO:0005829,GO:0019264,GO:0030170,GO:0035999,GO:0046653;gene=glyA;Parent=GCA000010485_02543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000349814,BlastRules:WP_000919159,BlastRules:WP_003227669,COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_000919159.1,SO:0001217,UniParc:UPI0000110FA1,UniRef:UniRef100_P0A825,UniRef:UniRef50_P0A825,UniRef:UniRef90_P0A825;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	2607364	2608554	.	+	.	ID=GCA000010485_02544_gene;locus_tag=GCA000010485_02544;gene=hmpA
contig_1	Pyrodigal	CDS	2607364	2608554	.	+	0	ID=GCA000010485_02544;Name=NO-inducible flavohemoprotein;locus_tag=GCA000010485_02544;product=NO-inducible flavohemoprotein;Dbxref=GO:0005344,GO:0008941,GO:0009636,GO:0019825,GO:0020037,GO:0046210,GO:0046872,GO:0051409,GO:0071500,GO:0071949;gene=hmpA;Parent=GCA000010485_02544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,KEGG:K05916,RefSeq:WP_000883165.1,SO:0001217,UniParc:UPI0001C22C86,UniRef:UniRef100_A0A066T7K0,UniRef:UniRef50_P24232,UniRef:UniRef90_P24232;ec_number=1.14.12.17
contig_1	Pyrodigal	gene	2608599	2608937	.	-	.	ID=GCA000010485_02545_gene;locus_tag=GCA000010485_02545;gene=glnB
contig_1	Pyrodigal	CDS	2608599	2608937	.	-	0	ID=GCA000010485_02545;Name=nitrogen regulatory protein P-II;locus_tag=GCA000010485_02545;product=nitrogen regulatory protein P-II;Dbxref=GO:0005524,GO:0005829,GO:0006808,GO:0030234;gene=glnB;Parent=GCA000010485_02545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0347,COG:TE,RefSeq:WP_000717694.1,SO:0001217,UniParc:UPI0000059A7E,UniRef:UniRef100_P0A9Z1,UniRef:UniRef50_P0A9Z1,UniRef:UniRef90_P0A9Z1
contig_1	Pyrodigal	gene	2608998	2610332	.	-	.	ID=GCA000010485_02546_gene;locus_tag=GCA000010485_02546;gene=qseF
contig_1	Pyrodigal	CDS	2608998	2610332	.	-	0	ID=GCA000010485_02546;Name=two-component system response regulator QseF/GlrR;locus_tag=GCA000010485_02546;product=two-component system response regulator QseF/GlrR;Dbxref=GO:0000160,GO:0003677,GO:0005524,GO:0005737,GO:0006355,GO:0008134,GO:0016887;gene=qseF;Parent=GCA000010485_02546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295369,COG:COG2204,COG:T,KEGG:K07715,RefSeq:WP_001298983.1,SO:0001217,UniParc:UPI00005EF2D2,UniRef:UniRef100_E2QQ14,UniRef:UniRef50_P0AFU4,UniRef:UniRef90_P0AFU4
contig_1	Pyrodigal	gene	2610322	2611035	.	-	.	ID=GCA000010485_02547_gene;locus_tag=GCA000010485_02547;gene=qseG
contig_1	Pyrodigal	CDS	2610322	2611035	.	-	0	ID=GCA000010485_02547;Name=two-component system QseEF-associated lipoprotein QseG;locus_tag=GCA000010485_02547;product=two-component system QseEF-associated lipoprotein QseG;Dbxref=GO:0009279;gene=qseG;Parent=GCA000010485_02547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001215903.1,SO:0001217,UniParc:UPI00018875B5,UniRef:UniRef100_A0A061YI78,UniRef:UniRef50_P0AD44,UniRef:UniRef90_P0AD44
contig_1	Pyrodigal	gene	2611200	2612582	.	-	.	ID=GCA000010485_02548_gene;locus_tag=GCA000010485_02548;gene=qseE
contig_1	Pyrodigal	CDS	2611200	2612582	.	-	0	ID=GCA000010485_02548;Name=two component system sensor histidine kinase QseE/GlrK;locus_tag=GCA000010485_02548;product=two component system sensor histidine kinase QseE/GlrK;gene=qseE;Parent=GCA000010485_02548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001301750,SO:0001217,UniParc:UPI0002A4099F,UniRef:UniRef100_A0A192C9U3,UniRef:UniRef50_A0A6I2IEW6,UniRef:UniRef90_A0A0A8KJX6
contig_1	Infernal	gene	2612684	2612871	.	-	.	ID=GCA000010485_02549_gene;locus_tag=GCA000010485_02549;gene=GlmZ_SraJ
contig_1	Infernal	ncRNA	2612684	2612871	1.5e-08	-	.	ID=GCA000010485_02549;Name=GlmZ RNA activator of glmS mRNA;locus_tag=GCA000010485_02549;product=GlmZ RNA activator of glmS mRNA;Dbxref=RFAM:RF00083;Parent=GCA000010485_02549_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00083
contig_1	Infernal	gene	2612722	2612869	.	-	.	ID=GCA000010485_02550_gene;locus_tag=GCA000010485_02550;gene=GlmY_tke1
contig_1	Infernal	ncRNA	2612722	2612869	6.6e-27	-	.	ID=GCA000010485_02550;Name=Glm Y RNA activator of glmS mRNA;locus_tag=GCA000010485_02550;product=Glm Y RNA activator of glmS mRNA;Dbxref=RFAM:RF00128;Parent=GCA000010485_02550_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00128
contig_1	Pyrodigal	gene	2613203	2617090	.	-	.	ID=GCA000010485_02551_gene;locus_tag=GCA000010485_02551;gene=purL
contig_1	Pyrodigal	CDS	2613203	2617090	.	-	0	ID=GCA000010485_02551;Name=phosphoribosylformylglycinamidine synthase;locus_tag=GCA000010485_02551;product=phosphoribosylformylglycinamidine synthase;Dbxref=GO:0004642,GO:0005524,GO:0005737,GO:0006189,GO:0046872;gene=purL;Parent=GCA000010485_02551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0047,COG:F,KEGG:K01952,RefSeq:WP_001531893.1,SO:0001217,UniParc:UPI0001C22C89,UniRef:UniRef100_A0A066T7J4,UniRef:UniRef50_P15254,UniRef:UniRef90_P15254;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	2617348	2618904	.	+	.	ID=GCA000010485_02552_gene;locus_tag=GCA000010485_02552;gene=mltF
contig_1	Pyrodigal	CDS	2617348	2618904	.	+	0	ID=GCA000010485_02552;Name=membrane-bound lytic murein transglycosylase MltF;locus_tag=GCA000010485_02552;product=membrane-bound lytic murein transglycosylase MltF;Dbxref=GO:0000270,GO:0008933,GO:0009253,GO:0009279,GO:0016020,GO:0016998,GO:0071555;gene=mltF;Parent=GCA000010485_02552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4623,COG:MT,RefSeq:WP_000734193.1,SO:0001217,UniParc:UPI00005EEF43,UniRef:UniRef100_A7ZQ01,UniRef:UniRef50_P0AGC5,UniRef:UniRef90_P0AGC5;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	2618901	2619404	.	-	.	ID=GCA000010485_02553_gene;locus_tag=GCA000010485_02553;gene=tadA
contig_1	Pyrodigal	CDS	2618901	2619404	.	-	0	ID=GCA000010485_02553;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA000010485_02553;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270,GO:0052717;gene=tadA;Parent=GCA000010485_02553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_001531894.1,SO:0001217,UniParc:UPI0002A28265,UniRef:UniRef100_A0AAF0SLB8,UniRef:UniRef50_Q8XA44,UniRef:UniRef90_Q8XA44;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	2619462	2620097	.	-	.	ID=GCA000010485_02554_gene;locus_tag=GCA000010485_02554;gene=yfhb
contig_1	Pyrodigal	CDS	2619462	2620097	.	-	0	ID=GCA000010485_02554;Name=phosphatidylglycerophosphatase C;locus_tag=GCA000010485_02554;product=phosphatidylglycerophosphatase C;Dbxref=GO:0005886,GO:0006655,GO:0008962,GO:0009395,GO:0016787,GO:0046872;gene=yfhb;Parent=GCA000010485_02554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0560,COG:E,RefSeq:WP_000190644.1,SO:0001217,UniParc:UPI00005EF961,UniRef:UniRef100_E2QQ20,UniRef:UniRef50_P0AD42,UniRef:UniRef90_P0AD42;ec_number=3.1.3.27
contig_1	Pyrodigal	gene	2620306	2621154	.	+	.	ID=GCA000010485_02555_gene;locus_tag=GCA000010485_02555;gene=yfhH
contig_1	Pyrodigal	CDS	2620306	2621154	.	+	0	ID=GCA000010485_02555;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000010485_02555;product=MurR/RpiR family transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0097367,GO:1901135;gene=yfhH;Parent=GCA000010485_02555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,KEGG:K15835,RefSeq:WP_001296301.1,SO:0001217,UniParc:UPI000160890E,UniRef:UniRef100_A0A066SZC6,UniRef:UniRef50_P37767,UniRef:UniRef90_P37767
contig_1	Pyrodigal	gene	2621210	2621470	.	+	.	ID=GCA000010485_02556_gene;locus_tag=GCA000010485_02556;gene=yfhL
contig_1	Pyrodigal	CDS	2621210	2621470	.	+	0	ID=GCA000010485_02556;Name=4Fe-4S dicluster ferredoxin YfhL;locus_tag=GCA000010485_02556;product=4Fe-4S dicluster ferredoxin YfhL;gene=yfhL;Parent=GCA000010485_02556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001196283,COG:C,COG:COG1143,RefSeq:WP_001196297.1,SO:0001217,UniParc:UPI00000DEEAB,UniRef:UniRef100_E2QQ22,UniRef:UniRef50_G0A8B0,UniRef:UniRef90_L0M344
contig_1	Bakta	gene	2621664	2621744	.	-	.	ID=GCA000010485_02557_gene;locus_tag=GCA000010485_02557;inference=ab initio prediction:Bakta;gene=shoB
contig_1	Bakta	CDS	2621664	2621744	.	-	0	ID=GCA000010485_02557;Name=Small toxic protein ShoB;locus_tag=GCA000010485_02557;product=Small toxic protein ShoB;Dbxref=GO:0012501,GO:0016020;gene=shoB;Parent=GCA000010485_02557_gene;Note=KEGG:K19154,RefSeq:WP_000128777.1,SO:0001217,UniParc:UPI00016A22AD,UniRef:UniRef100_A0A0A2S2Q7,UniRef:UniRef50_C1P611,UniRef:UniRef90_C1P611
contig_1	Infernal	gene	2622068	2622144	.	+	.	ID=GCA000010485_02558_gene;locus_tag=GCA000010485_02558;gene=ohsC_RNA
contig_1	Infernal	ncRNA	2622068	2622144	4.1e-18	+	.	ID=GCA000010485_02558;Name=Oppression of Hydrophobic ORF by sRNA;locus_tag=GCA000010485_02558;product=Oppression of Hydrophobic ORF by sRNA;Dbxref=RFAM:RF02495;Parent=GCA000010485_02558_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02495
contig_1	Pyrodigal	gene	2622165	2622545	.	-	.	ID=GCA000010485_02559_gene;locus_tag=GCA000010485_02559
contig_1	Pyrodigal	CDS	2622165	2622545	.	-	0	ID=GCA000010485_02559;Name=Holo-[acyl-carrier-protein] synthase;locus_tag=GCA000010485_02559;product=Holo-[acyl-carrier-protein] synthase;Parent=GCA000010485_02559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000986038.1,SO:0001217,UniParc:UPI00000DEEAC,UniRef:UniRef100_B7UH03,UniRef:UniRef90_B7N6F1
contig_1	Pyrodigal	gene	2622545	2623276	.	-	.	ID=GCA000010485_02560_gene;locus_tag=GCA000010485_02560;gene=pdxJ
contig_1	Pyrodigal	CDS	2622545	2623276	.	-	0	ID=GCA000010485_02560;Name=pyridoxine 5'-phosphate synthase;locus_tag=GCA000010485_02560;product=pyridoxine 5'-phosphate synthase;Dbxref=GO:0008615,GO:0033856;gene=pdxJ;Parent=GCA000010485_02560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0854,COG:H,KEGG:K03474,RefSeq:WP_001296302.1,SO:0001217,UniParc:UPI0000DACF4E,UniRef:UniRef100_E2QQ24,UniRef:UniRef50_P0A794,UniRef:UniRef90_A0A376TVB4;ec_number=2.6.99.2
contig_1	Pyrodigal	gene	2623288	2624016	.	-	.	ID=GCA000010485_02561_gene;locus_tag=GCA000010485_02561;gene=recO
contig_1	Pyrodigal	CDS	2623288	2624016	.	-	0	ID=GCA000010485_02561;Name=DNA repair protein RecO;locus_tag=GCA000010485_02561;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000010485_02561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,KEGG:K03584,RefSeq:WP_000399404.1,SO:0001217,UniParc:UPI00001335A0,UniRef:UniRef100_P0A7H3,UniRef:UniRef50_P0A7H3,UniRef:UniRef90_P0A7H3
contig_1	Pyrodigal	gene	2624028	2624933	.	-	.	ID=GCA000010485_02562_gene;locus_tag=GCA000010485_02562;gene=era
contig_1	Pyrodigal	CDS	2624028	2624933	.	-	0	ID=GCA000010485_02562;Name=GTPase Era;locus_tag=GCA000010485_02562;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181;gene=era;Parent=GCA000010485_02562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000020737.1,SO:0001217,UniParc:UPI00000DEEAE,UniRef:UniRef100_A7ZQ10,UniRef:UniRef50_P06616,UniRef:UniRef90_P06616;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2624930	2625610	.	-	.	ID=GCA000010485_02563_gene;locus_tag=GCA000010485_02563;gene=rnc
contig_1	Pyrodigal	CDS	2624930	2625610	.	-	0	ID=GCA000010485_02563;Name=ribonuclease III;locus_tag=GCA000010485_02563;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005737,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0019843,GO:0046872;gene=rnc;Parent=GCA000010485_02563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_001068343.1,SO:0001217,UniParc:UPI000013434C,UniRef:UniRef100_P0A7Y0,UniRef:UniRef50_P0A7Y0,UniRef:UniRef90_P0A7Y0;ec_number=3.1.26.3
contig_1	Infernal	regulatory_region	2625556	2625770	2.1e-39	-	.	ID=EFPPCJGBKI_281;Name=rncO;product=rncO;Dbxref=RFAM:RF00552;inference=profile:Rfam:RF00552;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2625882	2626856	.	-	.	ID=GCA000010485_02564_gene;locus_tag=GCA000010485_02564;gene=lepB
contig_1	Pyrodigal	CDS	2625882	2626856	.	-	0	ID=GCA000010485_02564;Name=signal peptidase I;locus_tag=GCA000010485_02564;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465;gene=lepB;Parent=GCA000010485_02564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4959,COG:U,KEGG:K03100,RefSeq:WP_000002542.1,SO:0001217,UniParc:UPI000000E4BC,UniRef:UniRef100_C3SZ57,UniRef:UniRef50_P00803,UniRef:UniRef90_P0A1W2;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	2626872	2628671	.	-	.	ID=GCA000010485_02565_gene;locus_tag=GCA000010485_02565;gene=lepA
contig_1	Pyrodigal	CDS	2626872	2628671	.	-	0	ID=GCA000010485_02565;Name=translation elongation factor 4;locus_tag=GCA000010485_02565;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:0097216,GO:1990606;gene=lepA;Parent=GCA000010485_02565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_000790160.1,SO:0001217,UniParc:UPI0001C22C8B,UniRef:UniRef100_UPI0001C22C8B,UniRef:UniRef50_P60785,UniRef:UniRef90_P60785;ec_number=3.6.5.n1
contig_1	Infernal	gene	2628553	2629384	.	+	.	ID=GCA000010485_02566_gene;locus_tag=GCA000010485_02566;gene=asrC
contig_1	Infernal	ncRNA	2628553	2629384	6.9e-45	+	.	ID=GCA000010485_02566;Name=antisense RNA of rseC mRNA;locus_tag=GCA000010485_02566;gene=asrC;product=antisense RNA of rseC mRNA;Dbxref=RFAM:RF02746;Parent=GCA000010485_02566_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02746
contig_1	Pyrodigal	gene	2628869	2629348	.	-	.	ID=GCA000010485_02567_gene;locus_tag=GCA000010485_02567;gene=rseC
contig_1	Pyrodigal	CDS	2628869	2629348	.	-	0	ID=GCA000010485_02567;Name=SoxR-reducing system protein RseC;locus_tag=GCA000010485_02567;product=SoxR-reducing system protein RseC;Dbxref=GO:0005886,GO:0006979,GO:0098797,GO:1990204;gene=rseC;Parent=GCA000010485_02567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3086,COG:T,KEGG:K03803,RefSeq:WP_000589057.1,SO:0001217,UniParc:UPI00018875DA,UniRef:UniRef100_E2QQ30,UniRef:UniRef50_P46187,UniRef:UniRef90_P46187
contig_1	Pyrodigal	gene	2629345	2630301	.	-	.	ID=GCA000010485_02568_gene;locus_tag=GCA000010485_02568;gene=rseB
contig_1	Pyrodigal	CDS	2629345	2630301	.	-	0	ID=GCA000010485_02568;Name=sigma-E factor regulatory protein RseB;locus_tag=GCA000010485_02568;product=sigma-E factor regulatory protein RseB;gene=rseB;Parent=GCA000010485_02568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000812028.1,SO:0001217,UniParc:UPI0001C22C8C,UniRef:UniRef100_A0A061L1V1,UniRef:UniRef50_D0ZSY7,UniRef:UniRef90_A0A0H3MT15
contig_1	Pyrodigal	gene	2630301	2630951	.	-	.	ID=GCA000010485_02569_gene;locus_tag=GCA000010485_02569;gene=rseA
contig_1	Pyrodigal	CDS	2630301	2630951	.	-	0	ID=GCA000010485_02569;Name=anti-sigma-E factor RseA;locus_tag=GCA000010485_02569;product=anti-sigma-E factor RseA;Dbxref=GO:0005886,GO:0006950,GO:0016989,GO:0045892,GO:0060090,GO:1903865;gene=rseA;Parent=GCA000010485_02569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3073,COG:T,KEGG:K03597,RefSeq:WP_001168459.1,SO:0001217,UniParc:UPI00001351EC,UniRef:UniRef100_P0AFX7,UniRef:UniRef50_P0AFX7,UniRef:UniRef90_P0AFX7
contig_1	Pyrodigal	gene	2630984	2631559	.	-	.	ID=GCA000010485_02570_gene;locus_tag=GCA000010485_02570;gene=rpoE
contig_1	Pyrodigal	CDS	2630984	2631559	.	-	0	ID=GCA000010485_02570;Name=RNA polymerase sigma factor RpoE;locus_tag=GCA000010485_02570;product=RNA polymerase sigma factor RpoE;Dbxref=GO:0000345,GO:0003677,GO:0003700,GO:0005737,GO:0005886,GO:0006352,GO:0006355,GO:0006970,GO:0009266,GO:0016987,GO:0036460,GO:0045892,GO:0090605,GO:1903865,GO:2000142;gene=rpoE;Parent=GCA000010485_02570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000003307,COG:COG1595,COG:K,RefSeq:WP_001295364.1,SO:0001217,UniParc:UPI000013477E,UniRef:UniRef100_P0AGB6,UniRef:UniRef50_P0AGB6,UniRef:UniRef90_P0AGB6
contig_1	Pyrodigal	gene	2631967	2633589	.	+	.	ID=GCA000010485_02571_gene;locus_tag=GCA000010485_02571;gene=nadB
contig_1	Pyrodigal	CDS	2631967	2633589	.	+	0	ID=GCA000010485_02571;Name=L-aspartate oxidase;locus_tag=GCA000010485_02571;product=L-aspartate oxidase;Dbxref=GO:0005829,GO:0008734,GO:0009435,GO:0034628,GO:0050660;gene=nadB;Parent=GCA000010485_02571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0029,COG:H,KEGG:K00278,RefSeq:WP_001094476.1,SO:0001217,UniParc:UPI0001C22C8D,UniRef:UniRef100_A0A061YLN2,UniRef:UniRef50_P10902,UniRef:UniRef90_P10902;ec_number=1.4.3.16
contig_1	Pyrodigal	gene	2633574	2634311	.	-	.	ID=GCA000010485_02572_gene;locus_tag=GCA000010485_02572;gene=trmN
contig_1	Pyrodigal	CDS	2633574	2634311	.	-	0	ID=GCA000010485_02572;Name=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;locus_tag=GCA000010485_02572;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;Dbxref=GO:0003676,GO:0005737,GO:0008033,GO:0016430,GO:0030488,GO:0032259;gene=trmN;Parent=GCA000010485_02572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000083343,BlastRules:WP_000083348,COG:COG4123,COG:J,RefSeq:WP_000083664.1,SO:0001217,UniParc:UPI00005EFC6D,UniRef:UniRef100_B7UH15,UniRef:UniRef50_P31825,UniRef:UniRef90_P31825;ec_number=2.1.1.223
contig_1	Pyrodigal	gene	2634443	2635777	.	+	.	ID=GCA000010485_02573_gene;locus_tag=GCA000010485_02573;gene=srmB
contig_1	Pyrodigal	CDS	2634443	2635777	.	+	0	ID=GCA000010485_02573;Name=ATP-dependent RNA helicase SrmB;locus_tag=GCA000010485_02573;product=ATP-dependent RNA helicase SrmB;Dbxref=GO:0000027,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0008143,GO:0008186,GO:0016887,GO:0031555,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=srmB;Parent=GCA000010485_02573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_000219193.1,SO:0001217,UniParc:UPI000000E4C0,UniRef:UniRef100_C3SZ18,UniRef:UniRef50_P21507,UniRef:UniRef90_P21507;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	2635810	2636691	.	-	.	ID=GCA000010485_02574_gene;locus_tag=GCA000010485_02574;gene=lysR
contig_1	Pyrodigal	CDS	2635810	2636691	.	-	0	ID=GCA000010485_02574;Name=Transcriptional regulator LYSR-type;locus_tag=GCA000010485_02574;product=Transcriptional regulator LYSR-type;gene=lysR;Parent=GCA000010485_02574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001296304.1,SO:0001217,UniParc:UPI0001F6593B,UniRef:UniRef100_A0A066T7H4,UniRef:UniRef50_A0A1V7VZG3,UniRef:UniRef90_Q32CU4
contig_1	Pyrodigal	gene	2636794	2637381	.	+	.	ID=GCA000010485_02575_gene;locus_tag=GCA000010485_02575;gene=eamB
contig_1	Pyrodigal	CDS	2636794	2637381	.	+	0	ID=GCA000010485_02575;Name=cysteine/O-acetylserine transporter;locus_tag=GCA000010485_02575;product=cysteine/O-acetylserine transporter;Dbxref=GO:0005886,GO:0015171,GO:0033228;gene=eamB;Parent=GCA000010485_02575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11249,RefSeq:WP_000189207.1,SO:0001217,UniParc:UPI00000339B1,UniRef:UniRef100_P38101,UniRef:UniRef50_P38101,UniRef:UniRef90_P38101
contig_1	Pyrodigal	gene	2637437	2637820	.	-	.	ID=GCA000010485_02576_gene;locus_tag=GCA000010485_02576;gene=grcA
contig_1	Pyrodigal	CDS	2637437	2637820	.	-	0	ID=GCA000010485_02576;Name=autonomous glycyl radical cofactor GrcA;locus_tag=GCA000010485_02576;product=autonomous glycyl radical cofactor GrcA;Dbxref=GO:0003824,GO:0005829,GO:0008861;gene=grcA;Parent=GCA000010485_02576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3445,COG:H,KEGG:K06866,RefSeq:WP_000627804.1,SO:0001217,UniParc:UPI00004E1894,UniRef:UniRef100_B7UH18,UniRef:UniRef50_Q9CPH6,UniRef:UniRef90_Q32CU0
contig_1	Pyrodigal	gene	2638125	2638814	.	+	.	ID=GCA000010485_02577_gene;locus_tag=GCA000010485_02577;gene=ung
contig_1	Pyrodigal	CDS	2638125	2638814	.	+	0	ID=GCA000010485_02577;Name=uracil-DNA glycosylase;locus_tag=GCA000010485_02577;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0016799,GO:0097510;gene=ung;Parent=GCA000010485_02577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_001262723.1,SO:0001217,UniParc:UPI00005EEF38,UniRef:UniRef100_A7ZQ25,UniRef:UniRef50_A6TCJ2,UniRef:UniRef90_A6TCJ2;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	2638862	2639899	.	-	.	ID=GCA000010485_02578_gene;locus_tag=GCA000010485_02578;gene=yfiF
contig_1	Pyrodigal	CDS	2638862	2639899	.	-	0	ID=GCA000010485_02578;Name=tRNA/rRNA methyltransferase;locus_tag=GCA000010485_02578;product=tRNA/rRNA methyltransferase;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259;gene=yfiF;Parent=GCA000010485_02578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,KEGG:K03214,RefSeq:WP_000997384.1,SO:0001217,UniParc:UPI0000DACF51,UniRef:UniRef100_A0A066SZA9,UniRef:UniRef50_P0AGJ5,UniRef:UniRef90_P0AGJ5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	2640106	2640525	.	+	.	ID=GCA000010485_02579_gene;locus_tag=GCA000010485_02579;gene=trxC
contig_1	Pyrodigal	CDS	2640106	2640525	.	+	0	ID=GCA000010485_02579;Name=thioredoxin TrxC;locus_tag=GCA000010485_02579;product=thioredoxin TrxC;Dbxref=GO:0005829,GO:0006662,GO:0015035,GO:0046872,GO:0047134;gene=trxC;Parent=GCA000010485_02579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_001098726.1,SO:0001217,UniParc:UPI0000136D76,UniRef:UniRef100_P0AGG4,UniRef:UniRef50_P0AGG4,UniRef:UniRef90_P0AGG4;ec_number=1.8.1.8
contig_1	Pyrodigal	gene	2640594	2641292	.	+	.	ID=GCA000010485_02580_gene;locus_tag=GCA000010485_02580;gene=tapT
contig_1	Pyrodigal	CDS	2640594	2641292	.	+	0	ID=GCA000010485_02580;Name=tRNA-uridine aminocarboxypropyltransferase;locus_tag=GCA000010485_02580;product=tRNA-uridine aminocarboxypropyltransferase;Dbxref=GO:0006400,GO:0008270,GO:0016432;gene=tapT;Parent=GCA000010485_02580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300438,COG:COG3148,COG:J,KEGG:K05812,RefSeq:WP_001296305.1,SO:0001217,UniParc:UPI0001E8A636,UniRef:UniRef100_A0A061YKK3,UniRef:UniRef50_Q47319,UniRef:UniRef90_Q47319;ec_number=2.5.1.25
contig_1	Pyrodigal	gene	2641324	2643984	.	+	.	ID=GCA000010485_02581_gene;locus_tag=GCA000010485_02581;gene=pat
contig_1	Pyrodigal	CDS	2641324	2643984	.	+	0	ID=GCA000010485_02581;Name=protein lysine acetyltransferase;locus_tag=GCA000010485_02581;product=protein lysine acetyltransferase;Dbxref=GO:0005524,GO:0046872,GO:0061733;gene=pat;Parent=GCA000010485_02581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000082639,COG:COG1670,COG:JO,KEGG:K09181,RefSeq:WP_000082935.1,SO:0001217,UniParc:UPI0001C22C90,UniRef:UniRef100_A0A061L4B9,UniRef:UniRef50_P76594,UniRef:UniRef90_P76594;ec_number=2.3.1.-
contig_1	Bakta	gene	2644073	2644114	.	+	.	ID=GCA000010485_02582_gene;locus_tag=GCA000010485_02582;inference=ab initio prediction:Bakta;gene=pssL
contig_1	Bakta	CDS	2644073	2644114	.	+	0	ID=GCA000010485_02582;Name=Protein PssL;locus_tag=GCA000010485_02582;product=Protein PssL;gene=pssL;Parent=GCA000010485_02582_gene;Note=RefSeq:WP_211180504.1,SO:0001217,UniParc:UPI00107E640B,UniRef:UniRef100_P0DSG0,UniRef:UniRef50_P0DSG0,UniRef:UniRef90_P0DSG0
contig_1	Pyrodigal	gene	2644098	2645453	.	+	.	ID=GCA000010485_02583_gene;locus_tag=GCA000010485_02583;gene=pssA
contig_1	Pyrodigal	CDS	2644098	2645453	.	+	0	ID=GCA000010485_02583;Name=CDP-diacylglycerol--serine O-phosphatidyltransferase;locus_tag=GCA000010485_02583;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;Dbxref=GO:0003882,GO:0005543,GO:0005737,GO:0005829,GO:0005886,GO:0008444,GO:0008654,GO:0032049;gene=pssA;Parent=GCA000010485_02583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K00998,RefSeq:WP_001312028.1,SO:0001217,UniParc:UPI0001C22C91,UniRef:UniRef100_A0A066SYZ7,UniRef:UniRef50_P23830,UniRef:UniRef90_P23830;ec_number=2.7.8.8
contig_1	Pyrodigal	gene	2645550	2645822	.	+	.	ID=GCA000010485_02584_gene;locus_tag=GCA000010485_02584;gene=yfiM
contig_1	Pyrodigal	CDS	2645550	2645822	.	+	0	ID=GCA000010485_02584;Name=YfiM family lipoprotein;locus_tag=GCA000010485_02584;product=YfiM family lipoprotein;gene=yfiM;Parent=GCA000010485_02584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05811,SO:0001217,UniParc:UPI0001C22C92,UniRef:UniRef100_A0A061L1T5,UniRef:UniRef50_P46126,UniRef:UniRef90_A0A061L1T5
contig_1	Pyrodigal	gene	2645819	2646322	.	-	.	ID=GCA000010485_02585_gene;locus_tag=GCA000010485_02585
contig_1	Pyrodigal	CDS	2645819	2646322	.	-	0	ID=GCA000010485_02585;Name=Alpha-ketoglutarate transporter;locus_tag=GCA000010485_02585;product=Alpha-ketoglutarate transporter;Parent=GCA000010485_02585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8S0FMZ9
contig_1	Pyrodigal	gene	2646552	2648093	.	+	.	ID=GCA000010485_02586_gene;locus_tag=GCA000010485_02586;gene=tnp
contig_1	Pyrodigal	CDS	2646552	2648093	.	+	0	ID=GCA000010485_02586;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_02586;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_02586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_1	Pyrodigal	gene	2648108	2648854	.	+	.	ID=GCA000010485_02587_gene;locus_tag=GCA000010485_02587;gene=istB
contig_1	Pyrodigal	CDS	2648108	2648854	.	+	0	ID=GCA000010485_02587;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_02587;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_02587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_1	Pyrodigal	gene	2648912	2649703	.	-	.	ID=GCA000010485_02588_gene;locus_tag=GCA000010485_02588
contig_1	Pyrodigal	CDS	2648912	2649703	.	-	0	ID=GCA000010485_02588;Name=Alpha-ketoglutarate transporter;locus_tag=GCA000010485_02588;product=Alpha-ketoglutarate transporter;Parent=GCA000010485_02588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03761,SO:0001217,UniRef:UniRef50_R8Y5B3,UniRef:UniRef90_A0A376SBD3
contig_1	Infernal	gene	2650029	2650144	.	-	.	ID=GCA000010485_02589_gene;locus_tag=GCA000010485_02589;gene=rrf
contig_1	Infernal	rRNA	2650029	2650144	2e-15	-	.	ID=GCA000010485_02589;Name=5S ribosomal RNA;locus_tag=GCA000010485_02589;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_02589_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2650247	2653150	.	-	.	ID=GCA000010485_02590_gene;locus_tag=GCA000010485_02590;gene=rrl
contig_1	Infernal	rRNA	2650247	2653150	5.4e-06	-	.	ID=GCA000010485_02590;Name=23S ribosomal RNA;locus_tag=GCA000010485_02590;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_02590_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2653158	2653266	.	-	.	ID=GCA000010485_02591_gene;locus_tag=GCA000010485_02591;gene=StyR-44
contig_1	Infernal	ncRNA	2653158	2653266	2.3e-21	-	.	ID=GCA000010485_02591;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_02591;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_02591_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	tRNAscan-SE	gene	2653344	2653419	.	-	.	ID=GCA000010485_02592_gene;locus_tag=GCA000010485_02592;gene=trnE
contig_1	tRNAscan-SE	tRNA	2653344	2653419	.	-	.	ID=GCA000010485_02592;Name=tRNA-Glu(ttc);locus_tag=GCA000010485_02592;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000010485_02592_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	2653505	2655046	.	-	.	ID=GCA000010485_02593_gene;locus_tag=GCA000010485_02593;gene=rrs
contig_1	Infernal	rRNA	2653505	2655046	6.7e-48	-	.	ID=GCA000010485_02593;Name=16S ribosomal RNA;locus_tag=GCA000010485_02593;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_02593_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	2655487	2658060	.	-	.	ID=GCA000010485_02594_gene;locus_tag=GCA000010485_02594;gene=clpB
contig_1	Pyrodigal	CDS	2655487	2658060	.	-	0	ID=GCA000010485_02594;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000010485_02594;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026;gene=clpB;Parent=GCA000010485_02594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_001235102.1,SO:0001217,UniParc:UPI0000127B0F,UniRef:UniRef100_P63284,UniRef:UniRef50_P63284,UniRef:UniRef90_P63284
contig_1	Infernal	gene	2658041	2658179	.	-	.	ID=GCA000010485_02595_gene;locus_tag=GCA000010485_02595;gene=Ysr155_RyfD
contig_1	Infernal	ncRNA	2658041	2658179	7.1e-23	-	.	ID=GCA000010485_02595;Name=Yersinia sRNA 155(RyfD);locus_tag=GCA000010485_02595;product=Yersinia sRNA 155(RyfD);Dbxref=RFAM:RF02768;Parent=GCA000010485_02595_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02768
contig_1	Pyrodigal	gene	2658190	2658921	.	-	.	ID=GCA000010485_02596_gene;locus_tag=GCA000010485_02596;gene=yfiH
contig_1	Pyrodigal	CDS	2658190	2658921	.	-	0	ID=GCA000010485_02596;Name=purine nucleoside phosphorylase YfiH;locus_tag=GCA000010485_02596;product=purine nucleoside phosphorylase YfiH;Dbxref=GO:0004000,GO:0004731,GO:0005507,GO:0016491,GO:0017061,GO:0042803,GO:0046936;gene=yfiH;Parent=GCA000010485_02596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_000040156.1,SO:0001217,UniParc:UPI0001C22CC0,UniRef:UniRef100_A0A061KYK1,UniRef:UniRef50_P33644,UniRef:UniRef90_P33644;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2658918	2659898	.	-	.	ID=GCA000010485_02597_gene;locus_tag=GCA000010485_02597;gene=rluD
contig_1	Pyrodigal	CDS	2658918	2659898	.	-	0	ID=GCA000010485_02597;Name=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;locus_tag=GCA000010485_02597;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0005737,GO:0009451,GO:0009982,GO:0160140;gene=rluD;Parent=GCA000010485_02597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_000079111.1,SO:0001217,UniParc:UPI000187BFA3,UniRef:UniRef100_A0A066T1F5,UniRef:UniRef50_P33643,UniRef:UniRef90_P33643;ec_number=5.4.99.23
contig_1	Pyrodigal	gene	2660033	2660770	.	+	.	ID=GCA000010485_02598_gene;locus_tag=GCA000010485_02598;gene=bamD
contig_1	Pyrodigal	CDS	2660033	2660770	.	+	0	ID=GCA000010485_02598;Name=outer membrane protein assembly factor BamD;locus_tag=GCA000010485_02598;product=outer membrane protein assembly factor BamD;Dbxref=GO:0009279,GO:0016020,GO:0043165,GO:0051205,GO:1990063;gene=bamD;Parent=GCA000010485_02598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4105,COG:M,RefSeq:WP_000197686.1,SO:0001217,UniParc:UPI000013AEB5,UniRef:UniRef100_P0AC02,UniRef:UniRef50_P0AC02,UniRef:UniRef90_P0AC02
contig_1	Bakta	gene	2660999	2661034	.	+	.	ID=GCA000010485_02599_gene;locus_tag=GCA000010485_02599;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2660999	2661034	.	+	0	ID=GCA000010485_02599;Name=Leader peptide;locus_tag=GCA000010485_02599;product=Leader peptide;Parent=GCA000010485_02599_gene;Note=SO:0001217,UniParc:UPI00000BA933,UniRef:UniRef100_Q47345,UniRef:UniRef50_Q47345,UniRef:UniRef90_Q47345
contig_1	Pyrodigal	gene	2661040	2661381	.	+	.	ID=GCA000010485_02600_gene;locus_tag=GCA000010485_02600;gene=raiA
contig_1	Pyrodigal	CDS	2661040	2661381	.	+	0	ID=GCA000010485_02600;Name=ribosome-associated translation inhibitor RaiA;locus_tag=GCA000010485_02600;product=ribosome-associated translation inhibitor RaiA;Dbxref=GO:0022627,GO:0043024,GO:0045900;gene=raiA;Parent=GCA000010485_02600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_000178456.1,SO:0001217,UniParc:UPI00001133D7,UniRef:UniRef100_P0AD49,UniRef:UniRef50_P0AD49,UniRef:UniRef90_P0AD49
contig_1	Infernal	regulatory_region	2661484	2661609	1.5e-21	+	.	ID=EFPPCJGBKI_288;Name=Phenylalanine leader peptide;product=Phenylalanine leader peptide;Dbxref=RFAM:RF01859;inference=profile:Rfam:RF01859;Note=SO:0000140;regulatory_class=attenuator
contig_1	Bakta	gene	2661485	2661532	.	+	.	ID=GCA000010485_02601_gene;locus_tag=GCA000010485_02601;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2661485	2661532	.	+	0	ID=GCA000010485_02601;Name=Leader peptide of chorismate mutase-P-prephenate dehydratase;locus_tag=GCA000010485_02601;product=Leader peptide of chorismate mutase-P-prephenate dehydratase;Parent=GCA000010485_02601_gene;Note=RefSeq:WP_001386991.1,SO:0001217,UniParc:UPI00000D2AEC,UniRef:UniRef100_C3SYU2,UniRef:UniRef50_C3SYU2,UniRef:UniRef90_C3SYU2
contig_1	Pyrodigal	gene	2661631	2662791	.	+	.	ID=GCA000010485_02602_gene;locus_tag=GCA000010485_02602;gene=pheA
contig_1	Pyrodigal	CDS	2661631	2662791	.	+	0	ID=GCA000010485_02602;Name=bifunctional chorismate mutase/prephenate dehydratase;locus_tag=GCA000010485_02602;product=bifunctional chorismate mutase/prephenate dehydratase;Dbxref=GO:0004106,GO:0004664,GO:0005737,GO:0009094,GO:0046417;gene=pheA;Parent=GCA000010485_02602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1605,COG:E,RefSeq:WP_000200124.1,SO:0001217,UniParc:UPI00016A01DB,UniRef:UniRef100_A0A178Q0G6,UniRef:UniRef50_P0A9J8,UniRef:UniRef90_P0A9J8
contig_1	Pyrodigal	gene	2662834	2663955	.	-	.	ID=GCA000010485_02603_gene;locus_tag=GCA000010485_02603;gene=tyrA
contig_1	Pyrodigal	CDS	2662834	2663955	.	-	0	ID=GCA000010485_02603;Name=bifunctional chorismate mutase/prephenate dehydrogenase;locus_tag=GCA000010485_02603;product=bifunctional chorismate mutase/prephenate dehydrogenase;Dbxref=GO:0004106,GO:0004665,GO:0005737,GO:0006571,GO:0008977,GO:0009094,GO:0042803,GO:0046417,GO:0070403;gene=tyrA;Parent=GCA000010485_02603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1605,COG:E,RefSeq:WP_000225221.1,SO:0001217,UniParc:UPI00005AA97D,UniRef:UniRef100_J7R7P6,UniRef:UniRef50_P07023,UniRef:UniRef90_P07023;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	2663966	2665036	.	-	.	ID=GCA000010485_02604_gene;locus_tag=GCA000010485_02604;gene=aroF
contig_1	Pyrodigal	CDS	2663966	2665036	.	-	0	ID=GCA000010485_02604;Name=3-deoxy-7-phosphoheptulonate synthase AroF;locus_tag=GCA000010485_02604;product=3-deoxy-7-phosphoheptulonate synthase AroF;Dbxref=GO:0003849,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0016832,GO:0042802;gene=aroF;Parent=GCA000010485_02604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001168032,COG:COG0722,COG:E,KEGG:K01626,RefSeq:WP_001168045.1,SO:0001217,UniParc:UPI00005AA97E,UniRef:UniRef100_E2QQ58,UniRef:UniRef50_P00888,UniRef:UniRef90_P00888;ec_number=2.5.1.54
contig_1	Pyrodigal	gene	2665249	2665611	.	+	.	ID=GCA000010485_02605_gene;locus_tag=GCA000010485_02605
contig_1	Pyrodigal	CDS	2665249	2665611	.	+	0	ID=GCA000010485_02605;Name=DUF2799 domain-containing protein;locus_tag=GCA000010485_02605;product=DUF2799 domain-containing protein;Parent=GCA000010485_02605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001305735.1,SO:0001217,UniParc:UPI000245E531,UniRef:UniRef100_A0A061YGI6,UniRef:UniRef50_Q32D00,UniRef:UniRef90_Q3YYP2
contig_1	Pyrodigal	gene	2665758	2666276	.	+	.	ID=GCA000010485_02606_gene;locus_tag=GCA000010485_02606;gene=yfiR
contig_1	Pyrodigal	CDS	2665758	2666276	.	+	0	ID=GCA000010485_02606;Name=Protein YfiR;locus_tag=GCA000010485_02606;product=Protein YfiR;Dbxref=GO:0042597,GO:0071978;gene=yfiR;Parent=GCA000010485_02606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001212400.1,SO:0001217,UniParc:UPI00000E4A53,UniRef:UniRef100_E2QQ60,UniRef:UniRef50_P64548,UniRef:UniRef90_P64548
contig_1	Pyrodigal	gene	2666266	2667492	.	+	.	ID=GCA000010485_02607_gene;locus_tag=GCA000010485_02607;gene=dgcN
contig_1	Pyrodigal	CDS	2666266	2667492	.	+	0	ID=GCA000010485_02607;Name=diguanylate cyclase DgcN;locus_tag=GCA000010485_02607;product=diguanylate cyclase DgcN;Dbxref=GO:0005525,GO:0005886,GO:0007165,GO:0016020,GO:0032153,GO:0036460,GO:0042802,GO:0043709,GO:0046872,GO:0052621,GO:1902201;gene=dgcN;Parent=GCA000010485_02607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000969008.1,SO:0001217,UniParc:UPI0001C22CC1,UniRef:UniRef100_A0A1U9TT29,UniRef:UniRef50_P46139,UniRef:UniRef90_P46139;ec_number=2.7.7.65
contig_1	Pyrodigal	gene	2667508	2667990	.	+	.	ID=GCA000010485_02608_gene;locus_tag=GCA000010485_02608;gene=yfiB
contig_1	Pyrodigal	CDS	2667508	2667990	.	+	0	ID=GCA000010485_02608;Name=OmpA family protein;locus_tag=GCA000010485_02608;product=OmpA family protein;Dbxref=GO:0005886;gene=yfiB;Parent=GCA000010485_02608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000589793.1,SO:0001217,UniParc:UPI00000E4A54,UniRef:UniRef100_A0A0D8VJL6,UniRef:UniRef50_P07021,UniRef:UniRef90_P07021
contig_1	Pyrodigal	gene	2668067	2668414	.	-	.	ID=GCA000010485_02609_gene;locus_tag=GCA000010485_02609;gene=rplS
contig_1	Pyrodigal	CDS	2668067	2668414	.	-	0	ID=GCA000010485_02609;Name=50S ribosomal protein L19;locus_tag=GCA000010485_02609;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000010485_02609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_000065253.1,SO:0001217,UniParc:UPI00001639F1,UniRef:UniRef100_P0A7K6,UniRef:UniRef50_P0A7K6,UniRef:UniRef90_P0A7K6
contig_1	Pyrodigal	gene	2668456	2669223	.	-	.	ID=GCA000010485_02610_gene;locus_tag=GCA000010485_02610;gene=trmD
contig_1	Pyrodigal	CDS	2668456	2669223	.	-	0	ID=GCA000010485_02610;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000010485_02610;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0030488,GO:0052906;gene=trmD;Parent=GCA000010485_02610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,KEGG:K00554,RefSeq:WP_000264790.1,SO:0001217,UniParc:UPI000187BFD1,UniRef:UniRef100_B7UH56,UniRef:UniRef50_P0A873,UniRef:UniRef90_P0A873;ec_number=2.1.1.228
contig_1	Pyrodigal	gene	2669254	2669802	.	-	.	ID=GCA000010485_02611_gene;locus_tag=GCA000010485_02611;gene=rimM
contig_1	Pyrodigal	CDS	2669254	2669802	.	-	0	ID=GCA000010485_02611;Name=ribosome maturation factor RimM;locus_tag=GCA000010485_02611;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000010485_02611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_000043335.1,SO:0001217,UniParc:UPI0000133909,UniRef:UniRef100_P0A7X6,UniRef:UniRef50_P0A7X6,UniRef:UniRef90_P0A7X6
contig_1	Pyrodigal	gene	2669821	2670069	.	-	.	ID=GCA000010485_02612_gene;locus_tag=GCA000010485_02612;gene=rpsP
contig_1	Pyrodigal	CDS	2669821	2670069	.	-	0	ID=GCA000010485_02612;Name=30S ribosomal protein S16;locus_tag=GCA000010485_02612;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA000010485_02612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_000256450.1,SO:0001217,UniParc:UPI00001135EF,UniRef:UniRef100_P0A7T3,UniRef:UniRef50_P0A7T3,UniRef:UniRef90_P0A7T3
contig_1	Pyrodigal	gene	2670206	2671567	.	-	.	ID=GCA000010485_02613_gene;locus_tag=GCA000010485_02613;gene=ffh
contig_1	Pyrodigal	CDS	2670206	2671567	.	-	0	ID=GCA000010485_02613;Name=signal recognition particle protein;locus_tag=GCA000010485_02613;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0005829,GO:0006612,GO:0006614,GO:0008312,GO:0009306,GO:0016887,GO:0048500,GO:0048501,GO:1990904;gene=ffh;Parent=GCA000010485_02613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0541,COG:U,KEGG:K03106,RefSeq:WP_000460035.1,SO:0001217,UniParc:UPI0000135ED9,UniRef:UniRef100_P0AGD7,UniRef:UniRef50_P0AGD7,UniRef:UniRef90_P0AGD7;ec_number=3.6.5.4
contig_1	Pyrodigal	gene	2671659	2672525	.	+	.	ID=GCA000010485_02614_gene;locus_tag=GCA000010485_02614;gene=ypjD
contig_1	Pyrodigal	CDS	2671659	2672525	.	+	0	ID=GCA000010485_02614;Name=Inner membrane protein YpjD;locus_tag=GCA000010485_02614;product=Inner membrane protein YpjD;Dbxref=GO:0005886,GO:0017004,GO:0020037;gene=ypjD;Parent=GCA000010485_02614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4137,COG:R,SO:0001217,UniParc:UPI000191E76E,UniRef:UniRef100_A0A0J2ER65,UniRef:UniRef50_P64432,UniRef:UniRef90_P64432
contig_1	Pyrodigal	gene	2672591	2673832	.	+	.	ID=GCA000010485_02615_gene;locus_tag=GCA000010485_02615;gene=yfjD
contig_1	Pyrodigal	CDS	2672591	2673832	.	+	0	ID=GCA000010485_02615;Name=UPF0053 inner membrane protein YfjD;locus_tag=GCA000010485_02615;product=UPF0053 inner membrane protein YfjD;Dbxref=GO:0005886,GO:0050660;gene=yfjD;Parent=GCA000010485_02615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,SO:0001217,UniParc:UPI000016F092,UniRef:UniRef100_P37908,UniRef:UniRef50_P37908,UniRef:UniRef90_P37908
contig_1	Pyrodigal	gene	2673886	2674479	.	-	.	ID=GCA000010485_02616_gene;locus_tag=GCA000010485_02616;gene=grpE
contig_1	Pyrodigal	CDS	2673886	2674479	.	-	0	ID=GCA000010485_02616;Name=nucleotide exchange factor GrpE;locus_tag=GCA000010485_02616;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005829,GO:0006457,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000010485_02616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,RefSeq:WP_001296310.1,SO:0001217,UniParc:UPI000000E4D9,UniRef:UniRef100_B7UH62,UniRef:UniRef50_Q2NS02,UniRef:UniRef90_B7UH62
contig_1	Pyrodigal	gene	2674602	2675480	.	+	.	ID=GCA000010485_02617_gene;locus_tag=GCA000010485_02617;gene=nadK
contig_1	Pyrodigal	CDS	2674602	2675480	.	+	0	ID=GCA000010485_02617;Name=NAD(+) kinase;locus_tag=GCA000010485_02617;product=NAD(+) kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0019674,GO:0046872,GO:0051287;gene=nadK;Parent=GCA000010485_02617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_001059176.1,SO:0001217,UniParc:UPI00000DEEC7,UniRef:UniRef100_B7UH63,UniRef:UniRef50_P65774,UniRef:UniRef90_P65774;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	2675566	2677227	.	+	.	ID=GCA000010485_02618_gene;locus_tag=GCA000010485_02618;gene=recN
contig_1	Pyrodigal	CDS	2675566	2677227	.	+	0	ID=GCA000010485_02618;Name=DNA repair protein RecN;locus_tag=GCA000010485_02618;product=DNA repair protein RecN;Dbxref=GO:0000724,GO:0000725,GO:0005524,GO:0005829,GO:0006281,GO:0006302,GO:0006310,GO:0006974,GO:0009314,GO:0009411,GO:0009432,GO:0010165,GO:0010212,GO:0036298,GO:0043590;gene=recN;Parent=GCA000010485_02618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_000880937.1,SO:0001217,UniParc:UPI0001C22CC2,UniRef:UniRef100_UPI0001C22CC2,UniRef:UniRef50_P05824,UniRef:UniRef90_P05824
contig_1	Pyrodigal	gene	2677376	2677717	.	+	.	ID=GCA000010485_02619_gene;locus_tag=GCA000010485_02619;gene=bamE
contig_1	Pyrodigal	CDS	2677376	2677717	.	+	0	ID=GCA000010485_02619;Name=outer membrane protein assembly factor BamE;locus_tag=GCA000010485_02619;product=outer membrane protein assembly factor BamE;Dbxref=GO:0016020,GO:0030674,GO:0042802,GO:0043165,GO:0046677,GO:0051205,GO:1990063;gene=bamE;Parent=GCA000010485_02619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2913,COG:M,KEGG:K06186,RefSeq:WP_001203437.1,SO:0001217,UniParc:UPI0000135AC2,UniRef:UniRef100_P0A937,UniRef:UniRef50_P0A937,UniRef:UniRef90_P0A937
contig_1	Pyrodigal	gene	2677779	2678069	.	-	.	ID=GCA000010485_02620_gene;locus_tag=GCA000010485_02620;gene=ratB
contig_1	Pyrodigal	CDS	2677779	2678069	.	-	0	ID=GCA000010485_02620;Name=RnfH family protein;locus_tag=GCA000010485_02620;product=RnfH family protein;Dbxref=GO:0005886;gene=ratB;Parent=GCA000010485_02620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2914,COG:V,KEGG:K09801,RefSeq:WP_001117834.1,SO:0001217,UniParc:UPI00001A3ADC,UniRef:UniRef100_Q8FEY5,UniRef:UniRef50_P52119,UniRef:UniRef90_P52119
contig_1	Pyrodigal	gene	2678059	2678508	.	-	.	ID=GCA000010485_02621_gene;locus_tag=GCA000010485_02621;gene=ratA
contig_1	Pyrodigal	CDS	2678059	2678508	.	-	0	ID=GCA000010485_02621;Name=type II toxin-antitoxin system toxin RatA;locus_tag=GCA000010485_02621;product=type II toxin-antitoxin system toxin RatA;Dbxref=GO:0045333,GO:0048039;gene=ratA;Parent=GCA000010485_02621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000600189,COG:COG2867,COG:J,SO:0001217,UniParc:UPI00005EF67E,UniRef:UniRef100_Q8FEY4,UniRef:UniRef50_P0AGL5,UniRef:UniRef90_P0AGL5
contig_1	Pyrodigal	gene	2678667	2679149	.	+	.	ID=GCA000010485_02622_gene;locus_tag=GCA000010485_02622;gene=smpB
contig_1	Pyrodigal	CDS	2678667	2679149	.	+	0	ID=GCA000010485_02622;Name=SsrA-binding protein SmpB;locus_tag=GCA000010485_02622;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000010485_02622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_000162574.1,SO:0001217,UniParc:UPI00001639F3,UniRef:UniRef100_P0A832,UniRef:UniRef50_P0A832,UniRef:UniRef90_P0A832
contig_1	Aragorn	gene	2679364	2679726	.	+	.	ID=GCA000010485_02623_gene;locus_tag=GCA000010485_02623;gene=ssrA
contig_1	Aragorn	tmRNA	2679364	2679726	.	+	.	ID=GCA000010485_02623;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000010485_02623;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=2679453..2679488;Parent=GCA000010485_02623_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	2680410	2681387	.	+	.	ID=GCA000010485_02624_gene;locus_tag=GCA000010485_02624;gene=glaH
contig_1	Pyrodigal	CDS	2680410	2681387	.	+	0	ID=GCA000010485_02624;Name=glutarate dioxygenase GlaH;locus_tag=GCA000010485_02624;product=glutarate dioxygenase GlaH;Dbxref=GO:0008198,GO:0019477,GO:0050498,GO:0106343;gene=glaH;Parent=GCA000010485_02624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15737,RefSeq:WP_000993107.1,SO:0001217,UniParc:UPI0001C22CC4,UniRef:UniRef100_A0A061L549,UniRef:UniRef50_P76621,UniRef:UniRef90_Q8FES6;ec_number=1.14.11.64
contig_1	Pyrodigal	gene	2681407	2682672	.	+	.	ID=GCA000010485_02625_gene;locus_tag=GCA000010485_02625;gene=lhgO
contig_1	Pyrodigal	CDS	2681407	2682672	.	+	0	ID=GCA000010485_02625;Name=L-2-hydroxyglutarate oxidase;locus_tag=GCA000010485_02625;product=L-2-hydroxyglutarate oxidase;Dbxref=GO:0005737,GO:0005886,GO:0016491,GO:0019477,GO:0047545,GO:0050660,GO:0140696;gene=lhgO;Parent=GCA000010485_02625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,RefSeq:WP_000271888.1,SO:0001217,UniParc:UPI0001C22CC5,UniRef:UniRef100_A0A066T3I8,UniRef:UniRef50_P37339,UniRef:UniRef90_P37339;ec_number=1.1.5.13
contig_1	Pyrodigal	gene	2682698	2684146	.	+	.	ID=GCA000010485_02626_gene;locus_tag=GCA000010485_02626;gene=gabD
contig_1	Pyrodigal	CDS	2682698	2684146	.	+	0	ID=GCA000010485_02626;Name=NADP-dependent succinate-semialdehyde dehydrogenase;locus_tag=GCA000010485_02626;product=NADP-dependent succinate-semialdehyde dehydrogenase;Dbxref=GO:0004777,GO:0005829,GO:0009013,GO:0009450,GO:0032991,GO:0036243,GO:0042802,GO:0050661,GO:0051289,GO:0102810,GO:1990748;gene=gabD;Parent=GCA000010485_02626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000772888.1,SO:0001217,UniParc:UPI0001C22CC6,UniRef:UniRef100_A0A061YGG7,UniRef:UniRef50_P25526,UniRef:UniRef90_P25526;ec_number=1.2.1.79
contig_1	Pyrodigal	gene	2684160	2685440	.	+	.	ID=GCA000010485_02627_gene;locus_tag=GCA000010485_02627;gene=gabT
contig_1	Pyrodigal	CDS	2684160	2685440	.	+	0	ID=GCA000010485_02627;Name=4-aminobutyrate--2-oxoglutarate transaminase;locus_tag=GCA000010485_02627;product=4-aminobutyrate--2-oxoglutarate transaminase;Dbxref=GO:0003992,GO:0005829,GO:0009448,GO:0009450,GO:0030170,GO:0034386,GO:0042450,GO:0042803,GO:0047589;gene=gabT;Parent=GCA000010485_02627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0160,COG:E,KEGG:K14268,RefSeq:WP_000625041.1,SO:0001217,UniParc:UPI0001C22CC7,UniRef:UniRef100_A0A066SYY3,UniRef:UniRef50_P22256,UniRef:UniRef90_P22256;ec_number=2.6.1.19
contig_1	Pyrodigal	gene	2685677	2687077	.	+	.	ID=GCA000010485_02628_gene;locus_tag=GCA000010485_02628;gene=gabP
contig_1	Pyrodigal	CDS	2685677	2687077	.	+	0	ID=GCA000010485_02628;Name=GABA permease;locus_tag=GCA000010485_02628;product=GABA permease;Dbxref=GO:0005886,GO:0006865,GO:0006974,GO:0006995,GO:0009450,GO:0015185,GO:0015291,GO:0015812,GO:0016020,GO:0090549;gene=gabP;Parent=GCA000010485_02628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_001296312.1,SO:0001217,UniParc:UPI0001C22CC8,UniRef:UniRef100_A0A0C5EMY1,UniRef:UniRef50_P25527,UniRef:UniRef90_P25527
contig_1	Pyrodigal	gene	2687098	2687760	.	+	.	ID=GCA000010485_02629_gene;locus_tag=GCA000010485_02629;gene=csiR
contig_1	Pyrodigal	CDS	2687098	2687760	.	+	0	ID=GCA000010485_02629;Name=DNA-binding transcriptional regulator CsiR;locus_tag=GCA000010485_02629;product=DNA-binding transcriptional regulator CsiR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:2000143;gene=csiR;Parent=GCA000010485_02629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1802,COG:K,KEGG:K15735,RefSeq:WP_000156817.1,SO:0001217,UniParc:UPI00016088EB,UniRef:UniRef100_A0A061L788,UniRef:UniRef50_P37338,UniRef:UniRef90_P37338
contig_1	Pyrodigal	gene	2687761	2688210	.	-	.	ID=GCA000010485_02630_gene;locus_tag=GCA000010485_02630;gene=kbp
contig_1	Pyrodigal	CDS	2687761	2688210	.	-	0	ID=GCA000010485_02630;Name=potassium binding protein Kbp;locus_tag=GCA000010485_02630;product=potassium binding protein Kbp;Dbxref=GO:0005737,GO:0030955,GO:0035864;gene=kbp;Parent=GCA000010485_02630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000522415,COG:COG1652,COG:P,RefSeq:WP_000522415.1,SO:0001217,UniParc:UPI0000167DCC,UniRef:UniRef100_P0ADE6,UniRef:UniRef50_P0ADE6,UniRef:UniRef90_P0ADE6
contig_1	Pyrodigal	gene	2688294	2688452	.	-	.	ID=GCA000010485_02631_gene;locus_tag=GCA000010485_02631;gene=yqaE
contig_1	Pyrodigal	CDS	2688294	2688452	.	-	0	ID=GCA000010485_02631;Name=UPF0057 membrane protein YqaE;locus_tag=GCA000010485_02631;product=UPF0057 membrane protein YqaE;Dbxref=GO:0005886,GO:0046677;gene=yqaE;Parent=GCA000010485_02631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0401,RefSeq:WP_000508177.1,SO:0001217,UniParc:UPI000013BED1,UniRef:UniRef100_P0AE42,UniRef:UniRef50_P0AE42,UniRef:UniRef90_P0AE42
contig_1	Pyrodigal	gene	2688635	2688934	.	+	.	ID=GCA000010485_02632_gene;locus_tag=GCA000010485_02632;gene=arsR
contig_1	Pyrodigal	CDS	2688635	2688934	.	+	0	ID=GCA000010485_02632;Name=ArsR family transcriptional regulator;locus_tag=GCA000010485_02632;product=ArsR family transcriptional regulator;gene=arsR;Parent=GCA000010485_02632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0640,COG:K,RefSeq:WP_000137288.1,SO:0001217,UniParc:UPI0001C22CC9,UniRef:UniRef100_A0A061YGG3,UniRef:UniRef50_P77295,UniRef:UniRef90_A0AB33SH13
contig_1	Pyrodigal	gene	2688944	2689468	.	+	.	ID=GCA000010485_02633_gene;locus_tag=GCA000010485_02633;gene=ygaP
contig_1	Pyrodigal	CDS	2688944	2689468	.	+	0	ID=GCA000010485_02633;Name=thiosulfate sulfurtransferase YgaP;locus_tag=GCA000010485_02633;product=thiosulfate sulfurtransferase YgaP;Dbxref=GO:0004792,GO:0005886;gene=ygaP;Parent=GCA000010485_02633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001229442,COG:COG0607,COG:P,RefSeq:WP_001229463.1,SO:0001217,UniParc:UPI0001C22CCA,UniRef:UniRef100_A0A061YCZ5,UniRef:UniRef50_P55734,UniRef:UniRef90_P55734;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	2689515	2689919	.	-	.	ID=GCA000010485_02634_gene;locus_tag=GCA000010485_02634;gene=stpA
contig_1	Pyrodigal	CDS	2689515	2689919	.	-	0	ID=GCA000010485_02634;Name=DNA-binding protein StpA;locus_tag=GCA000010485_02634;product=DNA-binding protein StpA;gene=stpA;Parent=GCA000010485_02634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11685,RefSeq:WP_000115381.1,SO:0001217,UniParc:UPI00000DEF09,UniRef:UniRef100_E2QQC2,UniRef:UniRef50_P0ACG1,UniRef:UniRef90_E2QQC2
contig_1	Pyrodigal	gene	2690587	2691036	.	+	.	ID=GCA000010485_02635_gene;locus_tag=GCA000010485_02635;gene=alaE
contig_1	Pyrodigal	CDS	2690587	2691036	.	+	0	ID=GCA000010485_02635;Name=L-alanine exporter AlaE;locus_tag=GCA000010485_02635;product=L-alanine exporter AlaE;Dbxref=GO:0005886,GO:0032973,GO:0034639;gene=alaE;Parent=GCA000010485_02635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000492669,RefSeq:WP_000492656.1,SO:0001217,UniParc:UPI000013B01A,UniRef:UniRef100_P64550,UniRef:UniRef50_P64550,UniRef:UniRef90_P64550
contig_1	Pyrodigal	gene	2691073	2691417	.	-	.	ID=GCA000010485_02636_gene;locus_tag=GCA000010485_02636;gene=ygaC
contig_1	Pyrodigal	CDS	2691073	2691417	.	-	0	ID=GCA000010485_02636;Name=DUF2002 domain-containing protein;locus_tag=GCA000010485_02636;product=DUF2002 domain-containing protein;gene=ygaC;Parent=GCA000010485_02636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000281320.1,SO:0001217,UniParc:UPI000013B00D,UniRef:UniRef100_P0AD53,UniRef:UniRef50_P0AD53,UniRef:UniRef90_P0AD53
contig_1	Pyrodigal	gene	2691569	2691898	.	+	.	ID=GCA000010485_02637_gene;locus_tag=GCA000010485_02637;gene=ygaM
contig_1	Pyrodigal	CDS	2691569	2691898	.	+	0	ID=GCA000010485_02637;Name=putative protein YgaM;locus_tag=GCA000010485_02637;product=putative protein YgaM;Dbxref=GO:0005829,GO:0005886,GO:0043022;gene=ygaM;Parent=GCA000010485_02637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4575,COG:J,RefSeq:WP_001295174.1,SO:0001217,UniParc:UPI00001B5129,UniRef:UniRef100_P0ADQ7,UniRef:UniRef50_P0ADQ7,UniRef:UniRef90_P0ADQ7
contig_1	Pyrodigal	gene	2692145	2692390	.	+	.	ID=GCA000010485_02638_gene;locus_tag=GCA000010485_02638;gene=nrdH
contig_1	Pyrodigal	CDS	2692145	2692390	.	+	0	ID=GCA000010485_02638;Name=glutaredoxin-like protein NrdH;locus_tag=GCA000010485_02638;product=glutaredoxin-like protein NrdH;Dbxref=GO:0009055,GO:0045454;gene=nrdH;Parent=GCA000010485_02638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,RefSeq:WP_001223227.1,SO:0001217,UniParc:UPI00001130BB,UniRef:UniRef100_P0AC65,UniRef:UniRef50_P0AC65,UniRef:UniRef90_P0AC65
contig_1	Pyrodigal	gene	2692387	2692797	.	+	.	ID=GCA000010485_02639_gene;locus_tag=GCA000010485_02639;gene=nrdI
contig_1	Pyrodigal	CDS	2692387	2692797	.	+	0	ID=GCA000010485_02639;Name=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;locus_tag=GCA000010485_02639;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;Dbxref=GO:0009263,GO:0010181,GO:0036211;gene=nrdI;Parent=GCA000010485_02639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1780,COG:F,KEGG:K03647,RefSeq:WP_000080947.1,SO:0001217,UniParc:UPI00001304D9,UniRef:UniRef100_P0A772,UniRef:UniRef50_P0A772,UniRef:UniRef90_P0A772
contig_1	Pyrodigal	gene	2692770	2694914	.	+	.	ID=GCA000010485_02640_gene;locus_tag=GCA000010485_02640;gene=nrdE
contig_1	Pyrodigal	CDS	2692770	2694914	.	+	0	ID=GCA000010485_02640;Name=class 1b ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000010485_02640;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0005971,GO:0006260,GO:0009185,GO:0009263,GO:0009265,GO:0015949;gene=nrdE;Parent=GCA000010485_02640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000246582.1,SO:0001217,UniParc:UPI0001C22CFE,UniRef:UniRef100_A0A066SYW7,UniRef:UniRef50_Q08698,UniRef:UniRef90_P39452;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	2694924	2695883	.	+	.	ID=GCA000010485_02641_gene;locus_tag=GCA000010485_02641;gene=nrdF
contig_1	Pyrodigal	CDS	2694924	2695883	.	+	0	ID=GCA000010485_02641;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000010485_02641;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009185,GO:0009263,GO:0009265,GO:0030145;gene=nrdF;Parent=GCA000010485_02641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_000777934.1,SO:0001217,UniParc:UPI0001C22CFF,UniRef:UniRef100_A0A061YFA5,UniRef:UniRef50_P37146,UniRef:UniRef90_P37146;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	2696239	2697441	.	+	.	ID=GCA000010485_02642_gene;locus_tag=GCA000010485_02642;gene=proV
contig_1	Pyrodigal	CDS	2696239	2697441	.	+	0	ID=GCA000010485_02642;Name=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;locus_tag=GCA000010485_02642;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;Dbxref=GO:0005524,GO:0005886,GO:0006865,GO:0016887,GO:0031460,GO:0071470;gene=proV;Parent=GCA000010485_02642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4175,COG:E,RefSeq:WP_000985509.1,SO:0001217,UniParc:UPI0001C22D00,UniRef:UniRef100_A0A061YK15,UniRef:UniRef50_P14175,UniRef:UniRef90_P14175
contig_1	Pyrodigal	gene	2697434	2698498	.	+	.	ID=GCA000010485_02643_gene;locus_tag=GCA000010485_02643;gene=proW
contig_1	Pyrodigal	CDS	2697434	2698498	.	+	0	ID=GCA000010485_02643;Name=glycine betaine/L-proline ABC transporter permease ProW;locus_tag=GCA000010485_02643;product=glycine betaine/L-proline ABC transporter permease ProW;Dbxref=GO:0005275,GO:0006865,GO:0015226,GO:0015871,GO:0016020,GO:0031460,GO:0043190,GO:0055085,GO:1902603;gene=proW;Parent=GCA000010485_02643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4176,COG:E,KEGG:K02001,RefSeq:WP_000774966.1,SO:0001217,UniParc:UPI0001C22D01,UniRef:UniRef100_A0A061YLV6,UniRef:UniRef50_P14176,UniRef:UniRef90_P14176
contig_1	Pyrodigal	gene	2698555	2699547	.	+	.	ID=GCA000010485_02644_gene;locus_tag=GCA000010485_02644;gene=proX
contig_1	Pyrodigal	CDS	2698555	2699547	.	+	0	ID=GCA000010485_02644;Name=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;locus_tag=GCA000010485_02644;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;Dbxref=GO:0006972,GO:0016020,GO:0022857,GO:0030288,GO:0031460,GO:0043190,GO:0050997,GO:0055085,GO:0071470,GO:0089718,GO:1903804,GO:1990222;gene=proX;Parent=GCA000010485_02644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001216534.1,SO:0001217,UniParc:UPI0001C22D02,UniRef:UniRef100_A0A061YDR4,UniRef:UniRef50_P0AFM2,UniRef:UniRef90_P0AFM2
contig_1	Infernal	gene	2699557	2699634	.	+	.	ID=GCA000010485_02645_gene;locus_tag=GCA000010485_02645;gene=naRNA4
contig_1	Infernal	ncRNA	2699557	2699634	1.3e-08	+	.	ID=GCA000010485_02645;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_02645;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_02645_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	2699739	2700923	.	+	.	ID=GCA000010485_02646_gene;locus_tag=GCA000010485_02646;gene=ygaY
contig_1	Pyrodigal	CDS	2699739	2700923	.	+	0	ID=GCA000010485_02646;Name=Putative putative transporter YgaY;locus_tag=GCA000010485_02646;product=Putative putative transporter YgaY;Dbxref=GO:0005886,GO:0022857;gene=ygaY;Parent=GCA000010485_02646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000165701.1,SO:0001217,UniParc:UPI0001C22D03,UniRef:UniRef100_A0A061L530,UniRef:UniRef50_P76628,UniRef:UniRef90_P76628
contig_1	Pyrodigal	gene	2701047	2701784	.	+	.	ID=GCA000010485_02647_gene;locus_tag=GCA000010485_02647;gene=ygaZ
contig_1	Pyrodigal	CDS	2701047	2701784	.	+	0	ID=GCA000010485_02647;Name=L-valine exporter subunit YgaZ;locus_tag=GCA000010485_02647;product=L-valine exporter subunit YgaZ;Dbxref=GO:0005886,GO:1902495,GO:1903785;gene=ygaZ;Parent=GCA000010485_02647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000445651,COG:COG1296,COG:E,KEGG:K26605,RefSeq:WP_000445658.1,SO:0001217,UniParc:UPI00000D0899,UniRef:UniRef100_C3SY67,UniRef:UniRef50_P76630,UniRef:UniRef90_P76630
contig_1	Pyrodigal	gene	2701774	2702109	.	+	.	ID=GCA000010485_02648_gene;locus_tag=GCA000010485_02648;gene=ygaH
contig_1	Pyrodigal	CDS	2701774	2702109	.	+	0	ID=GCA000010485_02648;Name=L-valine transporter subunit YgaH;locus_tag=GCA000010485_02648;product=L-valine transporter subunit YgaH;Dbxref=GO:0005886,GO:1902495,GO:1903785;gene=ygaH;Parent=GCA000010485_02648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000119749.1,SO:0001217,UniParc:UPI000000E4F0,UniRef:UniRef100_C3SY62,UniRef:UniRef50_P43667,UniRef:UniRef90_P43667
contig_1	Pyrodigal	gene	2702200	2702730	.	+	.	ID=GCA000010485_02649_gene;locus_tag=GCA000010485_02649;gene=emrR
contig_1	Pyrodigal	CDS	2702200	2702730	.	+	0	ID=GCA000010485_02649;Name=multidrug efflux transporter EmrAB transcriptional repressor EmrR;locus_tag=GCA000010485_02649;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006351,GO:0006355,GO:0006950,GO:0045892,GO:0046677;gene=emrR;Parent=GCA000010485_02649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000378442,COG:COG1846,COG:K,KEGG:K15974,RefSeq:WP_000378443.1,SO:0001217,UniParc:UPI0001C22D04,UniRef:UniRef100_A0A066T3A7,UniRef:UniRef50_P0ACR9,UniRef:UniRef90_P0ACR9
contig_1	Pyrodigal	gene	2702857	2704029	.	+	.	ID=GCA000010485_02650_gene;locus_tag=GCA000010485_02650;gene=emrA
contig_1	Pyrodigal	CDS	2702857	2704029	.	+	0	ID=GCA000010485_02650;Name=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;locus_tag=GCA000010485_02650;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;gene=emrA;Parent=GCA000010485_02650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001326681,COG:COG1566,COG:V,KEGG:K03543,RefSeq:WP_001295175.1,SO:0001217,UniParc:UPI00005AA9A2,UniRef:UniRef100_A0A0J3YR36,UniRef:UniRef50_C0PWL3,UniRef:UniRef90_C0PWL3
contig_1	Pyrodigal	gene	2704046	2705584	.	+	.	ID=GCA000010485_02651_gene;locus_tag=GCA000010485_02651;gene=emrB
contig_1	Pyrodigal	CDS	2704046	2705584	.	+	0	ID=GCA000010485_02651;Name=multidrug efflux MFS transporter permease subunit EmrB;locus_tag=GCA000010485_02651;product=multidrug efflux MFS transporter permease subunit EmrB;Dbxref=GO:0005886,GO:0009636,GO:0015125,GO:0015721,GO:0016020,GO:0022857,GO:0046677,GO:0048545,GO:0055085,GO:0098567,GO:0140330,GO:1990281,GO:1990961;gene=emrB;Parent=GCA000010485_02651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295176,COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_001296316.1,SO:0001217,UniParc:UPI00005EF68E,UniRef:UniRef100_E2QQE0,UniRef:UniRef50_P0AEJ0,UniRef:UniRef90_P0AEJ0
contig_1	Pyrodigal	gene	2705842	2706549	.	+	.	ID=GCA000010485_02652_gene;locus_tag=GCA000010485_02652
contig_1	Pyrodigal	CDS	2705842	2706549	.	+	0	ID=GCA000010485_02652;Name=RNA ligase domain-containing protein;locus_tag=GCA000010485_02652;product=RNA ligase domain-containing protein;Parent=GCA000010485_02652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001097132.1,SO:0001217,UniParc:UPI0001C22D05,UniRef:UniRef100_A0A061YL47,UniRef:UniRef50_I0K2R8,UniRef:UniRef90_Q32CN8
contig_1	Pyrodigal	gene	2706546	2707658	.	+	.	ID=GCA000010485_02653_gene;locus_tag=GCA000010485_02653
contig_1	Pyrodigal	CDS	2706546	2707658	.	+	0	ID=GCA000010485_02653;Name=HD domain-containing protein;locus_tag=GCA000010485_02653;product=HD domain-containing protein;Parent=GCA000010485_02653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4639,COG:R,RefSeq:WP_000638136.1,SO:0001217,UniParc:UPI0001C22D06,UniRef:UniRef100_A0A061YK26,UniRef:UniRef50_Q32CN7,UniRef:UniRef90_Q32CN7
contig_1	Pyrodigal	gene	2707709	2708224	.	-	.	ID=GCA000010485_02654_gene;locus_tag=GCA000010485_02654;gene=luxS
contig_1	Pyrodigal	CDS	2707709	2708224	.	-	0	ID=GCA000010485_02654;Name=S-ribosylhomocysteine lyase;locus_tag=GCA000010485_02654;product=S-ribosylhomocysteine lyase;Dbxref=GO:0005506,GO:0009372,GO:0043768;gene=luxS;Parent=GCA000010485_02654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,KEGG:K07173,RefSeq:WP_001130208.1,SO:0001217,UniParc:UPI00000DEF19,UniRef:UniRef100_Q8FEP8,UniRef:UniRef50_P45578,UniRef:UniRef90_P45578;ec_number=4.4.1.21
contig_1	Infernal	gene	2708293	2708364	.	+	.	ID=GCA000010485_02655_gene;locus_tag=GCA000010485_02655;gene=micA
contig_1	Infernal	ncRNA	2708293	2708364	2.2e-14	+	.	ID=GCA000010485_02655;Name=MicA sRNA;locus_tag=GCA000010485_02655;gene=micA;product=MicA sRNA;Dbxref=RFAM:RF00078;Parent=GCA000010485_02655_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00078
contig_1	Pyrodigal	gene	2708374	2709930	.	-	.	ID=GCA000010485_02656_gene;locus_tag=GCA000010485_02656;gene=gshA
contig_1	Pyrodigal	CDS	2708374	2709930	.	-	0	ID=GCA000010485_02656;Name=glutamate--cysteine ligase;locus_tag=GCA000010485_02656;product=glutamate--cysteine ligase;Dbxref=GO:0004357,GO:0005524,GO:0005829,GO:0006750,GO:0046872;gene=gshA;Parent=GCA000010485_02656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2918,COG:H,RefSeq:WP_000611804.1,SO:0001217,UniParc:UPI000012BBB0,UniRef:UniRef100_P0A6W9,UniRef:UniRef50_P0A6W9,UniRef:UniRef90_P0A6W9;ec_number=6.3.2.2
contig_1	Pyrodigal	gene	2710003	2710431	.	-	.	ID=GCA000010485_02657_gene;locus_tag=GCA000010485_02657;gene=yqaA
contig_1	Pyrodigal	CDS	2710003	2710431	.	-	0	ID=GCA000010485_02657;Name=Inner membrane protein YqaA;locus_tag=GCA000010485_02657;product=Inner membrane protein YqaA;Dbxref=GO:0005886;gene=yqaA;Parent=GCA000010485_02657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001287462.1,SO:0001217,UniParc:UPI00000DEF1A,UniRef:UniRef100_A0A061L520,UniRef:UniRef50_P0ADR0,UniRef:UniRef90_P0ADR0
contig_1	Pyrodigal	gene	2710428	2710994	.	-	.	ID=GCA000010485_02658_gene;locus_tag=GCA000010485_02658;gene=yqaB
contig_1	Pyrodigal	CDS	2710428	2710994	.	-	0	ID=GCA000010485_02658;Name=fructose-1-phosphate/6-phosphogluconate phosphatase;locus_tag=GCA000010485_02658;product=fructose-1-phosphate/6-phosphogluconate phosphatase;Dbxref=GO:0000287,GO:0005975,GO:0008801,GO:0016791,GO:0050308;gene=yqaB;Parent=GCA000010485_02658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000273309.1,SO:0001217,UniParc:UPI00000D08A2,UniRef:UniRef100_C3SY27,UniRef:UniRef50_P77475,UniRef:UniRef90_P77475;ec_number=3.1.3.-
contig_1	tRNAscan-SE	gene	2711275	2711351	.	-	.	ID=GCA000010485_02659_gene;locus_tag=GCA000010485_02659;gene=trnR
contig_1	tRNAscan-SE	tRNA	2711275	2711351	.	-	.	ID=GCA000010485_02659;Name=tRNA-Arg(acg);locus_tag=GCA000010485_02659;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000010485_02659_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	2711415	2711491	.	-	.	ID=GCA000010485_02660_gene;locus_tag=GCA000010485_02660;gene=trnR
contig_1	tRNAscan-SE	tRNA	2711415	2711491	.	-	.	ID=GCA000010485_02660;Name=tRNA-Arg(acg);locus_tag=GCA000010485_02660;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000010485_02660_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	2711554	2711630	.	-	.	ID=GCA000010485_02661_gene;locus_tag=GCA000010485_02661;gene=trnR
contig_1	tRNAscan-SE	tRNA	2711554	2711630	.	-	.	ID=GCA000010485_02661;Name=tRNA-Arg(acg);locus_tag=GCA000010485_02661;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000010485_02661_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	2711695	2711771	.	-	.	ID=GCA000010485_02662_gene;locus_tag=GCA000010485_02662;gene=trnR
contig_1	tRNAscan-SE	tRNA	2711695	2711771	.	-	.	ID=GCA000010485_02662;Name=tRNA-Arg(acg);locus_tag=GCA000010485_02662;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000010485_02662_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	2711775	2711867	.	-	.	ID=GCA000010485_02663_gene;locus_tag=GCA000010485_02663;gene=trnS
contig_1	tRNAscan-SE	tRNA	2711775	2711867	.	-	.	ID=GCA000010485_02663;Name=tRNA-Ser(gct);locus_tag=GCA000010485_02663;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000010485_02663_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Bakta	gene	2712097	2712186	.	+	.	ID=GCA000010485_02664_gene;locus_tag=GCA000010485_02664;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2712097	2712186	.	+	0	ID=GCA000010485_02664;Name=Transposase;locus_tag=GCA000010485_02664;product=Transposase;Parent=GCA000010485_02664_gene;Note=SO:0001217,UniParc:UPI00016A08A6,UniRef:UniRef100_A0A2X5EVS5,UniRef:UniRef50_A0A2X7U190,UniRef:UniRef90_A0A2X7U190
contig_1	Pyrodigal	gene	2712183	2712368	.	-	.	ID=GCA000010485_02665_gene;locus_tag=GCA000010485_02665;gene=alaS
contig_1	Pyrodigal	CDS	2712183	2712368	.	-	0	ID=GCA000010485_02665;Name=carbon storage regulator CsrA;locus_tag=GCA000010485_02665;product=carbon storage regulator CsrA;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0045892;gene=alaS;Parent=GCA000010485_02665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002209449,COG:COG0013,COG:J,RefSeq:WP_000906486.1,SO:0001217,UniParc:UPI0000047CA9,UniRef:UniRef100_A8ANQ0,UniRef:UniRef50_P00957,UniRef:UniRef90_A4WDQ6;ec_number=6.1.1.7
contig_1	Pyrodigal	gene	2712603	2715233	.	-	.	ID=GCA000010485_02666_gene;locus_tag=GCA000010485_02666;gene=alaS
contig_1	Pyrodigal	CDS	2712603	2715233	.	-	0	ID=GCA000010485_02666;Name=alanine--tRNA ligase;locus_tag=GCA000010485_02666;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0045892;gene=alaS;Parent=GCA000010485_02666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,RefSeq:WP_000047157.1,SO:0001217,UniParc:UPI0001C22D07,UniRef:UniRef100_A0A066SUV7,UniRef:UniRef50_P00957,UniRef:UniRef90_P00957;ec_number=6.1.1.7
contig_1	Pyrodigal	gene	2715362	2715862	.	-	.	ID=GCA000010485_02667_gene;locus_tag=GCA000010485_02667;gene=recX
contig_1	Pyrodigal	CDS	2715362	2715862	.	-	0	ID=GCA000010485_02667;Name=recombination regulator RecX;locus_tag=GCA000010485_02667;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0006282;gene=recX;Parent=GCA000010485_02667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_000140501.1,SO:0001217,UniParc:UPI0001C22D08,UniRef:UniRef100_A0A061L6Q9,UniRef:UniRef50_P33596,UniRef:UniRef90_P33596
contig_1	Pyrodigal	gene	2715931	2716992	.	-	.	ID=GCA000010485_02668_gene;locus_tag=GCA000010485_02668;gene=recA
contig_1	Pyrodigal	CDS	2715931	2716992	.	-	0	ID=GCA000010485_02668;Name=recombinase RecA;locus_tag=GCA000010485_02668;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA000010485_02668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_000963143.1,SO:0001217,UniParc:UPI0000112C1C,UniRef:UniRef100_P0A7G6,UniRef:UniRef50_P0A7G6,UniRef:UniRef90_P0A7G6
contig_1	Pyrodigal	gene	2717072	2717569	.	-	.	ID=GCA000010485_02669_gene;locus_tag=GCA000010485_02669;gene=pncC
contig_1	Pyrodigal	CDS	2717072	2717569	.	-	0	ID=GCA000010485_02669;Name=nicotinamide-nucleotide amidase;locus_tag=GCA000010485_02669;product=nicotinamide-nucleotide amidase;Dbxref=GO:0019159,GO:0019363;gene=pncC;Parent=GCA000010485_02669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1546,COG:H,RefSeq:WP_000140273.1,SO:0001217,UniParc:UPI0001C22D09,UniRef:UniRef100_A0A061YL60,UniRef:UniRef50_P0A6G3,UniRef:UniRef90_P0A6G3;ec_number=3.5.1.42
contig_1	Pyrodigal	gene	2717751	2717990	.	+	.	ID=GCA000010485_02670_gene;locus_tag=GCA000010485_02670
contig_1	Pyrodigal	CDS	2717751	2717990	.	+	0	ID=GCA000010485_02670;Name=Holin;locus_tag=GCA000010485_02670;product=Holin;Parent=GCA000010485_02670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985460.1,SO:0001217,UniParc:UPI0002185959,UniRef:UniRef100_A0A066SUV2,UniRef:UniRef50_A0A066SUV2,UniRef:UniRef90_A0A066SUV2
contig_1	Pyrodigal	gene	2718029	2719114	.	-	.	ID=GCA000010485_02671_gene;locus_tag=GCA000010485_02671;gene=mltB
contig_1	Pyrodigal	CDS	2718029	2719114	.	-	0	ID=GCA000010485_02671;Name=lytic murein transglycosylase B;locus_tag=GCA000010485_02671;product=lytic murein transglycosylase B;Dbxref=GO:0005509,GO:0008932,GO:0008933,GO:0009253,GO:0009279,GO:0030288,GO:0031402,GO:0071555;gene=mltB;Parent=GCA000010485_02671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2951,COG:M,RefSeq:WP_000476838.1,SO:0001217,UniParc:UPI00016D573C,UniRef:UniRef100_A0A066SV86,UniRef:UniRef50_P41052,UniRef:UniRef90_P41052;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	2719371	2719934	.	+	.	ID=GCA000010485_02672_gene;locus_tag=GCA000010485_02672;gene=srlA
contig_1	Pyrodigal	CDS	2719371	2719934	.	+	0	ID=GCA000010485_02672;Name=PTS glucitol/sorbitol transporter subunit IIC;locus_tag=GCA000010485_02672;product=PTS glucitol/sorbitol transporter subunit IIC;gene=srlA;Parent=GCA000010485_02672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000573321,COG:COG3730,COG:G,KEGG:K02783,RefSeq:WP_000573324.1,SO:0001217,UniParc:UPI00000DEF1D,UniRef:UniRef100_E2QQF0,UniRef:UniRef50_P56579,UniRef:UniRef90_V3D8S0;ec_number=2.7.1.198
contig_1	Pyrodigal	gene	2719931	2720890	.	+	.	ID=GCA000010485_02673_gene;locus_tag=GCA000010485_02673;gene=srlE
contig_1	Pyrodigal	CDS	2719931	2720890	.	+	0	ID=GCA000010485_02673;Name=PTS glucitol/sorbitol transporter subunit IIB;locus_tag=GCA000010485_02673;product=PTS glucitol/sorbitol transporter subunit IIB;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0015795,GO:0016301,GO:0090563,GO:1902495;gene=srlE;Parent=GCA000010485_02673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000148878,RefSeq:WP_000196936.1,SO:0001217,UniParc:UPI00005EF691,UniRef:UniRef100_E2QQF1,UniRef:UniRef50_P56580,UniRef:UniRef90_P56580;ec_number=2.7.1.198
contig_1	Pyrodigal	gene	2720901	2721272	.	+	.	ID=GCA000010485_02674_gene;locus_tag=GCA000010485_02674;gene=srlB
contig_1	Pyrodigal	CDS	2720901	2721272	.	+	0	ID=GCA000010485_02674;Name=PTS glucitol/sorbitol transporter subunit IIA;locus_tag=GCA000010485_02674;product=PTS glucitol/sorbitol transporter subunit IIA;Dbxref=GO:0005737,GO:0008982,GO:0009401,GO:0016301;gene=srlB;Parent=GCA000010485_02674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3731,COG:G,RefSeq:WP_000216213.1,SO:0001217,UniParc:UPI00005EF692,UniRef:UniRef100_A0A066SYT1,UniRef:UniRef50_P05706,UniRef:UniRef90_P05706;ec_number=2.7.1.198
contig_1	Pyrodigal	gene	2721276	2722055	.	+	.	ID=GCA000010485_02675_gene;locus_tag=GCA000010485_02675;gene=srlD
contig_1	Pyrodigal	CDS	2721276	2722055	.	+	0	ID=GCA000010485_02675;Name=sorbitol-6-phosphate dehydrogenase;locus_tag=GCA000010485_02675;product=sorbitol-6-phosphate dehydrogenase;Dbxref=GO:0006062,GO:0009010,GO:0016491,GO:0016616,GO:0032991,GO:0042802,GO:0051289;gene=srlD;Parent=GCA000010485_02675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_001077354.1,SO:0001217,UniParc:UPI00000DEF20,UniRef:UniRef100_E2QQF3,UniRef:UniRef50_P05707,UniRef:UniRef90_P05707;ec_number=1.1.1.140
contig_1	Pyrodigal	gene	2722161	2722520	.	+	.	ID=GCA000010485_02676_gene;locus_tag=GCA000010485_02676;gene=gutM
contig_1	Pyrodigal	CDS	2722161	2722520	.	+	0	ID=GCA000010485_02676;Name=transcriptional regulator GutM;locus_tag=GCA000010485_02676;product=transcriptional regulator GutM;Dbxref=GO:0003677,GO:0006355,GO:0009401;gene=gutM;Parent=GCA000010485_02676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4578,COG:K,KEGG:K02466,RefSeq:WP_000252908.1,SO:0001217,UniParc:UPI000012BE0A,UniRef:UniRef100_P15081,UniRef:UniRef50_P15081,UniRef:UniRef90_P15081
contig_1	Pyrodigal	gene	2722587	2723360	.	+	.	ID=GCA000010485_02677_gene;locus_tag=GCA000010485_02677;gene=srlR
contig_1	Pyrodigal	CDS	2722587	2723360	.	+	0	ID=GCA000010485_02677;Name=glucitol operon DNA-binding transcriptional repressor SrlR;locus_tag=GCA000010485_02677;product=glucitol operon DNA-binding transcriptional repressor SrlR;gene=srlR;Parent=GCA000010485_02677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000804550,COG:COG1349,COG:KG,RefSeq:WP_000804544.1,SO:0001217,UniParc:UPI00000DEF22,UniRef:UniRef100_E2QQF5,UniRef:UniRef50_A0A3P8JPI0,UniRef:UniRef90_A0A2N5AB02
contig_1	Pyrodigal	gene	2723353	2724318	.	+	.	ID=GCA000010485_02678_gene;locus_tag=GCA000010485_02678;gene=gutQ
contig_1	Pyrodigal	CDS	2723353	2724318	.	+	0	ID=GCA000010485_02678;Name=arabinose-5-phosphate isomerase GutQ;locus_tag=GCA000010485_02678;product=arabinose-5-phosphate isomerase GutQ;Dbxref=GO:0005524,GO:0019146,GO:0019294,GO:0046872;gene=gutQ;Parent=GCA000010485_02678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,RefSeq:WP_001287403.1,SO:0001217,UniParc:UPI0001C22D0B,UniRef:UniRef100_A0A061YHP9,UniRef:UniRef50_P17115,UniRef:UniRef90_P17115;ec_number=5.3.1.13
contig_1	Pyrodigal	gene	2724315	2725829	.	-	.	ID=GCA000010485_02679_gene;locus_tag=GCA000010485_02679;gene=norR
contig_1	Pyrodigal	CDS	2724315	2725829	.	-	0	ID=GCA000010485_02679;Name=nitric oxide reductase transcriptional regulator NorR;locus_tag=GCA000010485_02679;product=nitric oxide reductase transcriptional regulator NorR;Dbxref=GO:0000160,GO:0003677,GO:0003700,GO:0005524,GO:0006355,GO:0016887;gene=norR;Parent=GCA000010485_02679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3604,COG:KT,KEGG:K12266,RefSeq:WP_000010727.1,SO:0001217,UniParc:UPI0000D50BB0,UniRef:UniRef100_B7MKH8,UniRef:UniRef50_P37013,UniRef:UniRef90_P37013
contig_1	Pyrodigal	gene	2726016	2727455	.	+	.	ID=GCA000010485_02680_gene;locus_tag=GCA000010485_02680;gene=norV
contig_1	Pyrodigal	CDS	2726016	2727455	.	+	0	ID=GCA000010485_02680;Name=anaerobic nitric oxide reductase flavorubredoxin;locus_tag=GCA000010485_02680;product=anaerobic nitric oxide reductase flavorubredoxin;Dbxref=GO:0005506,GO:0005737,GO:0009055,GO:0010181,GO:0016966,GO:0046872;gene=norV;Parent=GCA000010485_02680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1773,COG:P,KEGG:K12264,RefSeq:WP_000029616.1,SO:0001217,UniParc:UPI000013038E,UniRef:UniRef100_P59404,UniRef:UniRef50_Q46877,UniRef:UniRef90_Q46877
contig_1	Pyrodigal	gene	2727452	2728585	.	+	.	ID=GCA000010485_02681_gene;locus_tag=GCA000010485_02681;gene=norW
contig_1	Pyrodigal	CDS	2727452	2728585	.	+	0	ID=GCA000010485_02681;Name=NADH:flavorubredoxin reductase NorW;locus_tag=GCA000010485_02681;product=NADH:flavorubredoxin reductase NorW;Dbxref=GO:0005737,GO:0015044,GO:0016731,GO:0046210,GO:0050660,GO:0071732;gene=norW;Parent=GCA000010485_02681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,KEGG:K12265,RefSeq:WP_000064691.1,SO:0001217,UniParc:UPI0001C22D0D,UniRef:UniRef100_A0A066SV75,UniRef:UniRef50_P37596,UniRef:UniRef90_P37596;ec_number=1.18.1.-
contig_1	Pyrodigal	gene	2728807	2731059	.	-	.	ID=GCA000010485_02682_gene;locus_tag=GCA000010485_02682;gene=hypF
contig_1	Pyrodigal	CDS	2728807	2731059	.	-	0	ID=GCA000010485_02682;Name=carbamoyltransferase HypF;locus_tag=GCA000010485_02682;product=carbamoyltransferase HypF;Dbxref=GO:0003725,GO:0003998,GO:0008270,GO:0016743,GO:0016874,GO:0036211,GO:0046872,GO:0051604,GO:0065003,GO:1904949;gene=hypF;Parent=GCA000010485_02682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0068,COG:O,KEGG:K04656,RefSeq:WP_001531905.1,SO:0001217,UniParc:UPI0001C22D3A,UniRef:UniRef100_A0A061YDU8,UniRef:UniRef50_P30131,UniRef:UniRef90_P30131;ec_number=6.2.-.-
contig_1	Pyrodigal	gene	2731212	2731739	.	-	.	ID=GCA000010485_02683_gene;locus_tag=GCA000010485_02683;gene=hydN
contig_1	Pyrodigal	CDS	2731212	2731739	.	-	0	ID=GCA000010485_02683;Name=electron transport protein HydN;locus_tag=GCA000010485_02683;product=electron transport protein HydN;Dbxref=GO:0009055,GO:0046872,GO:0051539;gene=hydN;Parent=GCA000010485_02683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1142,RefSeq:WP_001078777.1,SO:0001217,UniParc:UPI000012CFF0,UniRef:UniRef100_P0AAK4,UniRef:UniRef50_P0AAK4,UniRef:UniRef90_P0AAK4
contig_1	Pyrodigal	gene	2731847	2732050	.	+	.	ID=GCA000010485_02684_gene;locus_tag=GCA000010485_02684
contig_1	Pyrodigal	CDS	2731847	2732050	.	+	0	ID=GCA000010485_02684;Name=hypothetical protein;locus_tag=GCA000010485_02684;product=hypothetical protein;Parent=GCA000010485_02684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A1FDA5,UniRef:UniRef100_A0A061L495,UniRef:UniRef50_A0A061L495,UniRef:UniRef90_A0A061L495
contig_1	Pyrodigal	gene	2732167	2732604	.	+	.	ID=GCA000010485_02685_gene;locus_tag=GCA000010485_02685
contig_1	Pyrodigal	CDS	2732167	2732604	.	+	0	ID=GCA000010485_02685;Name=DUF4259 domain-containing protein;locus_tag=GCA000010485_02685;product=DUF4259 domain-containing protein;Parent=GCA000010485_02685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000536068.1,SO:0001217,UniParc:UPI0001C22D3B,UniRef:UniRef100_A0A061YK55,UniRef:UniRef50_A0A0V9RIF7,UniRef:UniRef90_A0A0V9RIF7
contig_1	Pyrodigal	gene	2732696	2733115	.	-	.	ID=GCA000010485_02686_gene;locus_tag=GCA000010485_02686;gene=higA
contig_1	Pyrodigal	CDS	2732696	2733115	.	-	0	ID=GCA000010485_02686;Name=Antitoxin HigA;locus_tag=GCA000010485_02686;product=Antitoxin HigA;gene=higA;Parent=GCA000010485_02686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5499,COG:V,KEGG:K18831,RefSeq:WP_000126294.1,SO:0001217,UniParc:UPI00005F0344,UniRef:UniRef100_J7R4Q0,UniRef:UniRef50_J7R4Q0,UniRef:UniRef90_J7R4Q0
contig_1	Pyrodigal	gene	2733351	2733818	.	-	.	ID=GCA000010485_02687_gene;locus_tag=GCA000010485_02687;gene=hycI
contig_1	Pyrodigal	CDS	2733351	2733818	.	-	0	ID=GCA000010485_02687;Name=hydrogenase maturation peptidase HycI;locus_tag=GCA000010485_02687;product=hydrogenase maturation peptidase HycI;Dbxref=GO:0004175,GO:0004190,GO:0008047,GO:0016485,GO:0036211,GO:0046872;gene=hycI;Parent=GCA000010485_02687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0680,KEGG:K08315,RefSeq:WP_000132953.1,SO:0001217,UniParc:UPI0001C22D3C,UniRef:UniRef100_A0A1V2SUM5,UniRef:UniRef50_P0AEV9,UniRef:UniRef90_P0AEV9;ec_number=3.4.23.51
contig_1	Pyrodigal	gene	2733811	2734221	.	-	.	ID=GCA000010485_02688_gene;locus_tag=GCA000010485_02688;gene=hycH
contig_1	Pyrodigal	CDS	2733811	2734221	.	-	0	ID=GCA000010485_02688;Name=formate hydrogenlyase assembly protein HycH;locus_tag=GCA000010485_02688;product=formate hydrogenlyase assembly protein HycH;Dbxref=GO:0065003;gene=hycH;Parent=GCA000010485_02688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001291921,RefSeq:WP_001291913.1,SO:0001217,UniParc:UPI0000D50BB7,UniRef:UniRef100_E2QQG7,UniRef:UniRef50_P0AEV7,UniRef:UniRef90_P0AEV7
contig_1	Pyrodigal	gene	2734218	2734985	.	-	.	ID=GCA000010485_02689_gene;locus_tag=GCA000010485_02689;gene=hycG
contig_1	Pyrodigal	CDS	2734218	2734985	.	-	0	ID=GCA000010485_02689;Name=formate hydrogenlyase subunit HycG;locus_tag=GCA000010485_02689;product=formate hydrogenlyase subunit HycG;gene=hycG;Parent=GCA000010485_02689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000067392,KEGG:K15832,RefSeq:WP_000067398.1,SO:0001217,UniParc:UPI0001C22D3D,UniRef:UniRef100_A0A061L489,UniRef:UniRef50_P16433,UniRef:UniRef90_E2QQG8
contig_1	Pyrodigal	gene	2734985	2735527	.	-	.	ID=GCA000010485_02690_gene;locus_tag=GCA000010485_02690;gene=hycF
contig_1	Pyrodigal	CDS	2734985	2735527	.	-	0	ID=GCA000010485_02690;Name=formate hydrogenlyase subunit HycF;locus_tag=GCA000010485_02690;product=formate hydrogenlyase subunit HycF;Dbxref=GO:0006007,GO:0009060,GO:0009061,GO:0009326,GO:0015944,GO:0016020,GO:0016651,GO:0019645,GO:0046872,GO:0051539;gene=hycF;Parent=GCA000010485_02690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000493781,COG:C,COG:COG1143,KEGG:K15831,RefSeq:WP_000493799.1,SO:0001217,UniParc:UPI00005EF69D,UniRef:UniRef100_A0A061YK60,UniRef:UniRef50_P16432,UniRef:UniRef90_P16432
contig_1	Pyrodigal	gene	2735537	2737246	.	-	.	ID=GCA000010485_02691_gene;locus_tag=GCA000010485_02691;gene=hycE
contig_1	Pyrodigal	CDS	2735537	2737246	.	-	0	ID=GCA000010485_02691;Name=formate hydrogenlyase subunit HycE;locus_tag=GCA000010485_02691;product=formate hydrogenlyase subunit HycE;gene=hycE;Parent=GCA000010485_02691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001288122,COG:C,COG:COG3262,RefSeq:WP_001288134.1,SO:0001217,UniParc:UPI00000D5E03,UniRef:UniRef100_C3SXR7,UniRef:UniRef50_P77329,UniRef:UniRef90_A0A085FZX6
contig_1	Pyrodigal	gene	2737264	2738187	.	-	.	ID=GCA000010485_02692_gene;locus_tag=GCA000010485_02692;gene=hycD
contig_1	Pyrodigal	CDS	2737264	2738187	.	-	0	ID=GCA000010485_02692;Name=formate hydrogenlyase subunit HycD;locus_tag=GCA000010485_02692;product=formate hydrogenlyase subunit HycD;Dbxref=GO:0005886,GO:0006007,GO:0009061,GO:0009326,GO:0015944,GO:0016491,GO:0019645;gene=hycD;Parent=GCA000010485_02692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000115224,KEGG:K15829,RefSeq:WP_000115226.1,SO:0001217,UniParc:UPI00000DEF30,UniRef:UniRef100_E2QQH1,UniRef:UniRef50_P16430,UniRef:UniRef90_P16430
contig_1	Pyrodigal	gene	2738190	2740016	.	-	.	ID=GCA000010485_02693_gene;locus_tag=GCA000010485_02693;gene=hycC
contig_1	Pyrodigal	CDS	2738190	2740016	.	-	0	ID=GCA000010485_02693;Name=formate hydrogenlyase subunit 3;locus_tag=GCA000010485_02693;product=formate hydrogenlyase subunit 3;Dbxref=GO:0008137,GO:0042773;gene=hycC;Parent=GCA000010485_02693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15828,RefSeq:WP_001274391.1,SO:0001217,UniParc:UPI0001C22D3E,UniRef:UniRef100_A0A066SUT0,UniRef:UniRef50_P16429,UniRef:UniRef90_E2QQH2
contig_1	Pyrodigal	gene	2740013	2740624	.	-	.	ID=GCA000010485_02694_gene;locus_tag=GCA000010485_02694;gene=hycB
contig_1	Pyrodigal	CDS	2740013	2740624	.	-	0	ID=GCA000010485_02694;Name=formate hydrogenlyase subunit HycB;locus_tag=GCA000010485_02694;product=formate hydrogenlyase subunit HycB;Dbxref=GO:0046872,GO:0051539;gene=hycB;Parent=GCA000010485_02694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001079186,COG:C,COG:COG1142,KEGG:K15827,RefSeq:WP_001079171.1,SO:0001217,UniParc:UPI0001C22D3F,UniRef:UniRef100_UPI0001C22D3F,UniRef:UniRef50_P0AAK1,UniRef:UniRef90_P0AAK1
contig_1	Pyrodigal	gene	2740749	2741210	.	-	.	ID=GCA000010485_02695_gene;locus_tag=GCA000010485_02695;gene=hycA
contig_1	Pyrodigal	CDS	2740749	2741210	.	-	0	ID=GCA000010485_02695;Name=formate hydrogenlyase regulator HycA;locus_tag=GCA000010485_02695;product=formate hydrogenlyase regulator HycA;gene=hycA;Parent=GCA000010485_02695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15833,RefSeq:WP_000158058.1,SO:0001217,UniParc:UPI00000E47CC,UniRef:UniRef100_A0A061LBG4,UniRef:UniRef50_P0AEV4,UniRef:UniRef90_P0AEV4
contig_1	Pyrodigal	gene	2741422	2741772	.	+	.	ID=GCA000010485_02696_gene;locus_tag=GCA000010485_02696;gene=hypA
contig_1	Pyrodigal	CDS	2741422	2741772	.	+	0	ID=GCA000010485_02696;Name=hydrogenase maturation nickel metallochaperone HypA;locus_tag=GCA000010485_02696;product=hydrogenase maturation nickel metallochaperone HypA;Dbxref=GO:0005886,GO:0008270,GO:0008901,GO:0016151,GO:0016530,GO:0036211,GO:0042802,GO:0051604,GO:0065003,GO:0110147,GO:1905360;gene=hypA;Parent=GCA000010485_02696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001299100.1,SO:0001217,UniParc:UPI000012D01F,UniRef:UniRef100_P0A700,UniRef:UniRef50_P0A700,UniRef:UniRef90_P0A700
contig_1	Pyrodigal	gene	2741776	2742648	.	+	.	ID=GCA000010485_02697_gene;locus_tag=GCA000010485_02697;gene=hypB
contig_1	Pyrodigal	CDS	2741776	2742648	.	+	0	ID=GCA000010485_02697;Name=hydrogenase nickel incorporation protein HypB;locus_tag=GCA000010485_02697;product=hydrogenase nickel incorporation protein HypB;Dbxref=GO:0003924,GO:0005525,GO:0008270,GO:0016151,GO:0016530,GO:0042803,GO:0051604,GO:0065003,GO:0097216,GO:0110147,GO:1905360;gene=hypB;Parent=GCA000010485_02697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K04652,RefSeq:WP_000337665.1,SO:0001217,UniParc:UPI000012D02F,UniRef:UniRef100_P0AAN3,UniRef:UniRef50_P0AAN3,UniRef:UniRef90_P0AAN3;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2742639	2742911	.	+	.	ID=GCA000010485_02698_gene;locus_tag=GCA000010485_02698;gene=hypC
contig_1	Pyrodigal	CDS	2742639	2742911	.	+	0	ID=GCA000010485_02698;Name=hydrogenase 3 maturation protein HypC;locus_tag=GCA000010485_02698;product=hydrogenase 3 maturation protein HypC;Dbxref=GO:0003924,GO:0005506,GO:0016151,GO:0051604,GO:1902670;gene=hypC;Parent=GCA000010485_02698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000334881,COG:COG0298,COG:O,KEGG:K04652,RefSeq:WP_000334881.1,SO:0001217,UniParc:UPI000012D03A,UniRef:UniRef100_P0AAM3,UniRef:UniRef50_P0AAM3,UniRef:UniRef90_P0AAM3;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2742911	2744032	.	+	.	ID=GCA000010485_02699_gene;locus_tag=GCA000010485_02699;gene=hypD
contig_1	Pyrodigal	CDS	2742911	2744032	.	+	0	ID=GCA000010485_02699;Name=hydrogenase formation protein HypD;locus_tag=GCA000010485_02699;product=hydrogenase formation protein HypD;Dbxref=GO:0005506,GO:0016530,GO:0016887,GO:0036211,GO:0051539,GO:0051604,GO:0065003,GO:0070025;gene=hypD;Parent=GCA000010485_02699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0409,COG:O,KEGG:K04654,RefSeq:WP_001212982.1,SO:0001217,UniParc:UPI000000E507,UniRef:UniRef100_A0A037YGY4,UniRef:UniRef50_P24192,UniRef:UniRef90_P24192
contig_1	Pyrodigal	gene	2744029	2745039	.	+	.	ID=GCA000010485_02700_gene;locus_tag=GCA000010485_02700;gene=hypE
contig_1	Pyrodigal	CDS	2744029	2745039	.	+	0	ID=GCA000010485_02700;Name=hydrogenase maturation carbamoyl dehydratase HypE;locus_tag=GCA000010485_02700;product=hydrogenase maturation carbamoyl dehydratase HypE;Dbxref=GO:0016829,GO:0051604,GO:0065003,GO:1904949;gene=hypE;Parent=GCA000010485_02700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001059922,BlastRules:WP_011153942,COG:COG0309,COG:O,KEGG:K04655,RefSeq:WP_001059911.1,SO:0001217,UniParc:UPI0002185987,UniRef:UniRef100_A0A061YK73,UniRef:UniRef50_P24193,UniRef:UniRef90_P24193;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	2745113	2747191	.	+	.	ID=GCA000010485_02701_gene;locus_tag=GCA000010485_02701;gene=flhA
contig_1	Pyrodigal	CDS	2745113	2747191	.	+	0	ID=GCA000010485_02701;Name=formate hydrogenlyase transcriptional activator FlhA;locus_tag=GCA000010485_02701;product=formate hydrogenlyase transcriptional activator FlhA;Dbxref=GO:0000160,GO:0000987,GO:0005515,GO:0005524,GO:0005667,GO:0006351,GO:0006355,GO:0008134,GO:0016887,GO:0042802,GO:0043565,GO:2000144;gene=flhA;Parent=GCA000010485_02701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000122674.1,SO:0001217,UniParc:UPI0000DACF67,UniRef:UniRef100_A0A061YM08,UniRef:UniRef50_P19323,UniRef:UniRef90_P19323
contig_1	Pyrodigal	gene	2747236	2747664	.	+	.	ID=GCA000010485_02702_gene;locus_tag=GCA000010485_02702;gene=mopI
contig_1	Pyrodigal	CDS	2747236	2747664	.	+	0	ID=GCA000010485_02702;Name=Mop domain-containing protein;locus_tag=GCA000010485_02702;product=Mop domain-containing protein;gene=mopI;Parent=GCA000010485_02702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3585,COG:H,KEGG:K02019,RefSeq:WP_000301062.1,SO:0001217,UniParc:UPI0000DACF68,UniRef:UniRef100_A0A1X0PZA8,UniRef:UniRef50_A0A198FWZ3,UniRef:UniRef90_A8ANU1
contig_1	Pyrodigal	gene	2747703	2748047	.	-	.	ID=GCA000010485_02703_gene;locus_tag=GCA000010485_02703;gene=ygbA
contig_1	Pyrodigal	CDS	2747703	2748047	.	-	0	ID=GCA000010485_02703;Name=nitrous oxide-stimulated promoter family protein;locus_tag=GCA000010485_02703;product=nitrous oxide-stimulated promoter family protein;gene=ygbA;Parent=GCA000010485_02703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000015482.1,SO:0001217,UniParc:UPI00005EF6A6,UniRef:UniRef100_A0A0L6ZX54,UniRef:UniRef50_P25728,UniRef:UniRef90_P25728
contig_1	Pyrodigal	gene	2748333	2750894	.	+	.	ID=GCA000010485_02704_gene;locus_tag=GCA000010485_02704;gene=mutS
contig_1	Pyrodigal	CDS	2748333	2750894	.	+	0	ID=GCA000010485_02704;Name=DNA mismatch repair protein MutS;locus_tag=GCA000010485_02704;product=DNA mismatch repair protein MutS;Dbxref=GO:0003684,GO:0005524,GO:0005829,GO:0006298,GO:0030983,GO:0140664;gene=mutS;Parent=GCA000010485_02704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000103863.1,SO:0001217,UniParc:UPI00000DEF38,UniRef:UniRef100_Q8FEL3,UniRef:UniRef50_P23909,UniRef:UniRef90_P23909
contig_1	Pyrodigal	gene	2751000	2751656	.	+	.	ID=GCA000010485_02705_gene;locus_tag=GCA000010485_02705;gene=pphB
contig_1	Pyrodigal	CDS	2751000	2751656	.	+	0	ID=GCA000010485_02705;Name=protein-serine/threonine phosphatase;locus_tag=GCA000010485_02705;product=protein-serine/threonine phosphatase;Dbxref=GO:0005737,GO:0008138,GO:0008803,GO:0016791,GO:0017018,GO:0033192,GO:0046872,GO:0110154,GO:0140791,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990439;gene=pphB;Parent=GCA000010485_02705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07314,RefSeq:WP_001141293.1,SO:0001217,UniParc:UPI0001C22D41,UniRef:UniRef100_A0A066T349,UniRef:UniRef50_P55799,UniRef:UniRef90_P55799;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	2751707	2752474	.	-	.	ID=GCA000010485_02706_gene;locus_tag=GCA000010485_02706;gene=ygbI
contig_1	Pyrodigal	CDS	2751707	2752474	.	-	0	ID=GCA000010485_02706;Name=DNA-binding transcriptional repressor YgbI;locus_tag=GCA000010485_02706;product=DNA-binding transcriptional repressor YgbI;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=ygbI;Parent=GCA000010485_02706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296319.1,SO:0001217,UniParc:UPI0001C22D42,UniRef:UniRef100_A0A066SYP1,UniRef:UniRef50_P52598,UniRef:UniRef90_P52598
contig_1	Pyrodigal	gene	2752670	2753578	.	+	.	ID=GCA000010485_02707_gene;locus_tag=GCA000010485_02707;gene=ltnD
contig_1	Pyrodigal	CDS	2752670	2753578	.	+	0	ID=GCA000010485_02707;Name=L-threonate dehydrogenase;locus_tag=GCA000010485_02707;product=L-threonate dehydrogenase;Dbxref=GO:0005975,GO:0016054,GO:0016616,GO:0050661,GO:0051287;gene=ltnD;Parent=GCA000010485_02707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000847996.1,SO:0001217,UniParc:UPI0001C22D43,UniRef:UniRef100_A0A066SUR7,UniRef:UniRef50_A0A0H2VA68,UniRef:UniRef90_A0A0H2VA68;ec_number=1.1.1.411
contig_1	Pyrodigal	gene	2753575	2754837	.	+	.	ID=GCA000010485_02708_gene;locus_tag=GCA000010485_02708;gene=otnK
contig_1	Pyrodigal	CDS	2753575	2754837	.	+	0	ID=GCA000010485_02708;Name=3-oxo-tetronate kinase;locus_tag=GCA000010485_02708;product=3-oxo-tetronate kinase;Dbxref=GO:0005524,GO:0005975,GO:0016301;gene=otnK;Parent=GCA000010485_02708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000912488,KEGG:K21948,RefSeq:WP_000590411.1,SO:0001217,UniParc:UPI0000DACF76,UniRef:UniRef100_A0A061L4X5,UniRef:UniRef50_Q8ZMG5,UniRef:UniRef90_Q46889;ec_number=2.7.1.217
contig_1	Pyrodigal	gene	2754834	2755472	.	+	.	ID=GCA000010485_02709_gene;locus_tag=GCA000010485_02709;gene=otnC
contig_1	Pyrodigal	CDS	2754834	2755472	.	+	0	ID=GCA000010485_02709;Name=aldolase;locus_tag=GCA000010485_02709;product=aldolase;Dbxref=GO:0005829,GO:0016832,GO:0019323,GO:0046872;gene=otnC;Parent=GCA000010485_02709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001279004.1,SO:0001217,UniParc:UPI0001C22D44,UniRef:UniRef100_A0A061L472,UniRef:UniRef50_A0A0H2VA12,UniRef:UniRef90_A0A0H2VA12;ec_number=4.1.2.-
contig_1	Pyrodigal	gene	2755477	2756253	.	+	.	ID=GCA000010485_02710_gene;locus_tag=GCA000010485_02710;gene=otnI
contig_1	Pyrodigal	CDS	2755477	2756253	.	+	0	ID=GCA000010485_02710;Name=HPr family phosphocarrier protein;locus_tag=GCA000010485_02710;product=HPr family phosphocarrier protein;Dbxref=GO:0008903,GO:0046487,GO:0046872;gene=otnI;Parent=GCA000010485_02710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001136914.1,SO:0001217,UniParc:UPI0001C22D45,UniRef:UniRef100_A0A066T344,UniRef:UniRef50_Q46891,UniRef:UniRef90_Q46891;ec_number=5.3.1.35
contig_1	Pyrodigal	gene	2756342	2757706	.	+	.	ID=GCA000010485_02711_gene;locus_tag=GCA000010485_02711;gene=ygbN
contig_1	Pyrodigal	CDS	2756342	2757706	.	+	0	ID=GCA000010485_02711;Name=GntP family transporter;locus_tag=GCA000010485_02711;product=GntP family transporter;Dbxref=GO:0005886,GO:0015128,GO:0016020,GO:0035429;gene=ygbN;Parent=GCA000010485_02711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000104433.1,SO:0001217,UniParc:UPI00000DEF3F,UniRef:UniRef100_E2QQJ0,UniRef:UniRef50_Q46892,UniRef:UniRef90_Q46892
contig_1	Pyrodigal	gene	2757849	2758892	.	-	.	ID=GCA000010485_02712_gene;locus_tag=GCA000010485_02712
contig_1	Pyrodigal	CDS	2757849	2758892	.	-	0	ID=GCA000010485_02712;Name=MBL fold metallo-hydrolase;locus_tag=GCA000010485_02712;product=MBL fold metallo-hydrolase;Parent=GCA000010485_02712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001161583.1,SO:0001217,UniParc:UPI0001C22D46,UniRef:UniRef100_A0A066SUR2,UniRef:UniRef50_A0A8S0FML8,UniRef:UniRef90_Q9F7X6
contig_1	Pyrodigal	gene	2759117	2759668	.	+	.	ID=GCA000010485_02713_gene;locus_tag=GCA000010485_02713;gene=wrbA
contig_1	Pyrodigal	CDS	2759117	2759668	.	+	0	ID=GCA000010485_02713;Name=Flavoprotein WrbA;locus_tag=GCA000010485_02713;product=Flavoprotein WrbA;gene=wrbA;Parent=GCA000010485_02713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001179444.1,SO:0001217,UniParc:UPI0001C22D47,UniRef:UniRef100_A0A061YHU2,UniRef:UniRef50_A0A0H2ZDT7,UniRef:UniRef90_A0A0D8VXJ0
contig_1	Pyrodigal	gene	2759839	2760831	.	-	.	ID=GCA000010485_02714_gene;locus_tag=GCA000010485_02714;gene=rpoS
contig_1	Pyrodigal	CDS	2759839	2760831	.	-	0	ID=GCA000010485_02714;Name=RNA polymerase sigma factor RpoS;locus_tag=GCA000010485_02714;product=RNA polymerase sigma factor RpoS;Dbxref=GO:0003677,GO:0003700,GO:0006352,GO:0006355,GO:0016987;gene=rpoS;Parent=GCA000010485_02714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000081550.1,SO:0001217,UniParc:UPI00000BEF92,UniRef:UniRef100_Q9APL2,UniRef:UniRef50_P13445,UniRef:UniRef90_Q9APL2,VFDB:VFC0301,VFDB:VFG000477
contig_1	Pyrodigal	gene	2760894	2762033	.	-	.	ID=GCA000010485_02715_gene;locus_tag=GCA000010485_02715;gene=nlpD
contig_1	Pyrodigal	CDS	2760894	2762033	.	-	0	ID=GCA000010485_02715;Name=murein hydrolase activator NlpD;locus_tag=GCA000010485_02715;product=murein hydrolase activator NlpD;gene=nlpD;Parent=GCA000010485_02715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P0ADA3,UniRef:UniRef90_B7LWJ4
contig_1	Pyrodigal	gene	2762173	2762799	.	-	.	ID=GCA000010485_02716_gene;locus_tag=GCA000010485_02716;gene=pcm
contig_1	Pyrodigal	CDS	2762173	2762799	.	-	0	ID=GCA000010485_02716;Name=protein-L-isoaspartate O-methyltransferase;locus_tag=GCA000010485_02716;product=protein-L-isoaspartate O-methyltransferase;Dbxref=GO:0004719,GO:0005737,GO:0030091,GO:0032259,GO:0036211;gene=pcm;Parent=GCA000010485_02716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2518,COG:O,RefSeq:WP_000254708.1,SO:0001217,UniParc:UPI00001654D3,UniRef:UniRef100_P0A7A5,UniRef:UniRef50_P0A7A5,UniRef:UniRef90_P0A7A5;ec_number=2.1.1.77
contig_1	Pyrodigal	gene	2762793	2763554	.	-	.	ID=GCA000010485_02717_gene;locus_tag=GCA000010485_02717;gene=surE
contig_1	Pyrodigal	CDS	2762793	2763554	.	-	0	ID=GCA000010485_02717;Name=5'/3'-nucleotidase SurE;locus_tag=GCA000010485_02717;product=5'/3'-nucleotidase SurE;Dbxref=GO:0000166,GO:0004309,GO:0005737,GO:0008252,GO:0008254,GO:0046872,GO:0106411;gene=surE;Parent=GCA000010485_02717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0496,COG:L,RefSeq:WP_001295182.1,SO:0001217,UniParc:UPI0000136250,UniRef:UniRef100_P0A840,UniRef:UniRef50_P0A840,UniRef:UniRef90_P0A840;ec_number=3.1.3.6
contig_1	Pyrodigal	gene	2763535	2764584	.	-	.	ID=GCA000010485_02718_gene;locus_tag=GCA000010485_02718;gene=truD
contig_1	Pyrodigal	CDS	2763535	2764584	.	-	0	ID=GCA000010485_02718;Name=tRNA pseudouridine(13) synthase TruD;locus_tag=GCA000010485_02718;product=tRNA pseudouridine(13) synthase TruD;Dbxref=GO:0001522,GO:0003723,GO:0005829,GO:0009982,GO:0031119,GO:0160150;gene=truD;Parent=GCA000010485_02718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0585,COG:J,KEGG:K06176,RefSeq:WP_000568920.1,SO:0001217,UniParc:UPI0001C22D49,UniRef:UniRef100_A0A061YHU9,UniRef:UniRef50_Q57261,UniRef:UniRef90_Q57261;ec_number=5.4.99.27
contig_1	Pyrodigal	gene	2764581	2765060	.	-	.	ID=GCA000010485_02719_gene;locus_tag=GCA000010485_02719;gene=ispF
contig_1	Pyrodigal	CDS	2764581	2765060	.	-	0	ID=GCA000010485_02719;Name=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;locus_tag=GCA000010485_02719;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;Dbxref=GO:0008685,GO:0016114,GO:0019288,GO:0046872;gene=ispF;Parent=GCA000010485_02719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001219237.1,SO:0001217,UniParc:UPI00000DEF47,UniRef:UniRef100_Q8FEJ6,UniRef:UniRef50_Q8FEJ6,UniRef:UniRef90_Q8FEJ6;ec_number=4.6.1.12
contig_1	Pyrodigal	gene	2765060	2765770	.	-	.	ID=GCA000010485_02720_gene;locus_tag=GCA000010485_02720;gene=ispD
contig_1	Pyrodigal	CDS	2765060	2765770	.	-	0	ID=GCA000010485_02720;Name=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;locus_tag=GCA000010485_02720;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;Dbxref=GO:0019288,GO:0050518;gene=ispD;Parent=GCA000010485_02720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000246149.1,SO:0001217,UniParc:UPI00000DEF48,UniRef:UniRef100_B7MKM1,UniRef:UniRef50_Q46893,UniRef:UniRef90_Q46893;ec_number=2.7.7.60
contig_1	Pyrodigal	gene	2765789	2766100	.	-	.	ID=GCA000010485_02721_gene;locus_tag=GCA000010485_02721;gene=ftsB
contig_1	Pyrodigal	CDS	2765789	2766100	.	-	0	ID=GCA000010485_02721;Name=cell division protein FtsB;locus_tag=GCA000010485_02721;product=cell division protein FtsB;Dbxref=GO:0005886,GO:0030428,GO:0032153,GO:0043093;gene=ftsB;Parent=GCA000010485_02721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2919,COG:D,KEGG:K05589,RefSeq:WP_000517479.1,SO:0001217,UniParc:UPI00000DEF49,UniRef:UniRef100_B7UHG7,UniRef:UniRef50_P0A6S5,UniRef:UniRef90_P0A6S5
contig_1	Pyrodigal	gene	2766293	2766616	.	-	.	ID=GCA000010485_02722_gene;locus_tag=GCA000010485_02722
contig_1	Pyrodigal	CDS	2766293	2766616	.	-	0	ID=GCA000010485_02722;Name=DUF3561 domain-containing protein;locus_tag=GCA000010485_02722;product=DUF3561 domain-containing protein;Parent=GCA000010485_02722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001246113.1,SO:0001217,UniParc:UPI00000DEF4A,UniRef:UniRef100_E2QQK1,UniRef:UniRef50_P46141,UniRef:UniRef90_A0A2B7M8I9
contig_1	Pyrodigal	gene	2766665	2767270	.	-	.	ID=GCA000010485_02723_gene;locus_tag=GCA000010485_02723;gene=cysC
contig_1	Pyrodigal	CDS	2766665	2767270	.	-	0	ID=GCA000010485_02723;Name=Adenylyl-sulfate kinase;locus_tag=GCA000010485_02723;product=Adenylyl-sulfate kinase;Dbxref=GO:0000103,GO:0004020,GO:0005524,GO:0070814;gene=cysC;Parent=GCA000010485_02723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0529,COG:P,RefSeq:WP_001173651.1,SO:0001217,UniParc:UPI0001C22D6F,UniRef:UniRef100_A0A066T327,UniRef:UniRef50_P0A6J1,UniRef:UniRef90_B7UHG9;ec_number=2.7.1.25
contig_1	Pyrodigal	gene	2767270	2768697	.	-	.	ID=GCA000010485_02724_gene;locus_tag=GCA000010485_02724;gene=cysN
contig_1	Pyrodigal	CDS	2767270	2768697	.	-	0	ID=GCA000010485_02724;Name=sulfate adenylyltransferase subunit CysN;locus_tag=GCA000010485_02724;product=sulfate adenylyltransferase subunit CysN;Dbxref=GO:0000103,GO:0003924,GO:0004781,GO:0005524,GO:0005525,GO:0006790,GO:0070814;gene=cysN;Parent=GCA000010485_02724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2895,COG:P,RefSeq:WP_001090370.1,SO:0001217,UniParc:UPI0001C22D70,UniRef:UniRef100_A0A061L459,UniRef:UniRef50_P23845,UniRef:UniRef90_P23845;ec_number=2.7.7.4
contig_1	Pyrodigal	gene	2768699	2769607	.	-	.	ID=GCA000010485_02725_gene;locus_tag=GCA000010485_02725;gene=cysD
contig_1	Pyrodigal	CDS	2768699	2769607	.	-	0	ID=GCA000010485_02725;Name=sulfate adenylyltransferase subunit CysD;locus_tag=GCA000010485_02725;product=sulfate adenylyltransferase subunit CysD;Dbxref=GO:0000103,GO:0004781,GO:0005524,GO:0070814;gene=cysD;Parent=GCA000010485_02725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0175,COG:EH,KEGG:K00957,RefSeq:WP_000372392.1,SO:0001217,UniParc:UPI00005F0353,UniRef:UniRef100_A7ZQJ6,UniRef:UniRef50_P21156,UniRef:UniRef90_P21156;ec_number=2.7.7.4
contig_1	Pyrodigal	gene	2769859	2770896	.	+	.	ID=GCA000010485_02726_gene;locus_tag=GCA000010485_02726;gene=iap
contig_1	Pyrodigal	CDS	2769859	2770896	.	+	0	ID=GCA000010485_02726;Name=alkaline phosphatase isozyme conversion aminopeptidase;locus_tag=GCA000010485_02726;product=alkaline phosphatase isozyme conversion aminopeptidase;Dbxref=GO:0004177,GO:0006508,GO:0008235,GO:0030288,GO:0043687,GO:0046872;gene=iap;Parent=GCA000010485_02726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000490428,COG:COG2234,COG:OE,KEGG:K09612,RefSeq:WP_000490439.1,SO:0001217,UniParc:UPI0001C22D71,UniRef:UniRef100_A0A066SV25,UniRef:UniRef50_P10423,UniRef:UniRef90_P10423;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	2770936	2771040	.	+	.	ID=GCA000010485_02727_gene;locus_tag=GCA000010485_02727
contig_1	Pyrodigal	CDS	2770936	2771040	.	+	0	ID=GCA000010485_02727;Name=hypothetical protein;locus_tag=GCA000010485_02727;product=hypothetical protein;Parent=GCA000010485_02727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A2B5CB,UniRef:UniRef100_A0AA36KZQ8,UniRef:UniRef50_A0AA36KZQ8,UniRef:UniRef90_A0AA36KZQ8
contig_1	Pyrodigal	gene	2771022	2771174	.	-	.	ID=GCA000010485_02728_gene;locus_tag=GCA000010485_02728;gene=hokG
contig_1	Pyrodigal	CDS	2771022	2771174	.	-	0	ID=GCA000010485_02728;Name=Putative protein HokG;locus_tag=GCA000010485_02728;product=Putative protein HokG;Dbxref=GO:0005886;gene=hokG;Parent=GCA000010485_02728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18922,RefSeq:WP_000956458.1,SO:0001217,UniParc:UPI00000D09F2,UniRef:UniRef100_Q8X7U9,UniRef:UniRef50_Q8X7U9,UniRef:UniRef90_Q8X7U9
contig_1	Infernal	gene	2771159	2771315	.	-	.	ID=GCA000010485_02729_gene;locus_tag=GCA000010485_02729;gene=sok
contig_1	Infernal	ncRNA	2771159	2771315	5.1e-17	-	.	ID=GCA000010485_02729;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_02729;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_02729_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	2771440	2772174	.	-	.	ID=GCA000010485_02730_gene;locus_tag=GCA000010485_02730;gene=cysH
contig_1	Pyrodigal	CDS	2771440	2772174	.	-	0	ID=GCA000010485_02730;Name=phosphoadenosine phosphosulfate reductase;locus_tag=GCA000010485_02730;product=phosphoadenosine phosphosulfate reductase;Dbxref=GO:0004604,GO:0005737,GO:0019379,GO:0070814;gene=cysH;Parent=GCA000010485_02730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0175,COG:EH,KEGG:K00390,RefSeq:WP_000039862.1,SO:0001217,UniParc:UPI0000167DD2,UniRef:UniRef100_B7UHH4,UniRef:UniRef50_P17854,UniRef:UniRef90_B7UHH4;ec_number=1.8.4.8
contig_1	Pyrodigal	gene	2772248	2773960	.	-	.	ID=GCA000010485_02731_gene;locus_tag=GCA000010485_02731;gene=cysI
contig_1	Pyrodigal	CDS	2772248	2773960	.	-	0	ID=GCA000010485_02731;Name=assimilatory sulfite reductase (NADPH) hemoprotein subunit;locus_tag=GCA000010485_02731;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;Dbxref=GO:0000103,GO:0004783,GO:0008652,GO:0009337,GO:0016002,GO:0019344,GO:0020037,GO:0046872,GO:0050311,GO:0050661,GO:0051539,GO:0070814;gene=cysI;Parent=GCA000010485_02731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0155,COG:P,RefSeq:WP_001290706.1,SO:0001217,UniParc:UPI00000D09F7,UniRef:UniRef100_A7ZQK6,UniRef:UniRef50_P38038,UniRef:UniRef90_P17846;ec_number=1.8.1.2
contig_1	Pyrodigal	gene	2773960	2775759	.	-	.	ID=GCA000010485_02732_gene;locus_tag=GCA000010485_02732;gene=cysJ
contig_1	Pyrodigal	CDS	2773960	2775759	.	-	0	ID=GCA000010485_02732;Name=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;locus_tag=GCA000010485_02732;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;Dbxref=GO:0000103,GO:0004783,GO:0005829,GO:0010181,GO:0019344,GO:0050660,GO:0070814;gene=cysJ;Parent=GCA000010485_02732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0369,COG:FP,RefSeq:WP_000211915.1,SO:0001217,UniParc:UPI0001C22D72,UniRef:UniRef100_A0A066SYL9,UniRef:UniRef50_P38038,UniRef:UniRef90_P38038;ec_number=1.8.1.2
contig_1	Pyrodigal	gene	2776075	2776440	.	+	.	ID=GCA000010485_02733_gene;locus_tag=GCA000010485_02733;gene=queD
contig_1	Pyrodigal	CDS	2776075	2776440	.	+	0	ID=GCA000010485_02733;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA000010485_02733;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008270,GO:0008616,GO:0042802,GO:0070497;gene=queD;Parent=GCA000010485_02733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,SO:0001217,UniParc:UPI00005EF648,UniRef:UniRef100_A0A0D6GUJ0,UniRef:UniRef50_P65870,UniRef:UniRef90_P65870;ec_number=4.1.2.50
contig_1	Pyrodigal	gene	2776518	2777789	.	+	.	ID=GCA000010485_02734_gene;locus_tag=GCA000010485_02734;gene=ygcN
contig_1	Pyrodigal	CDS	2776518	2777789	.	+	0	ID=GCA000010485_02734;Name=putative electron transfer flavoprotein-quinone oxidoreductase YgcN;locus_tag=GCA000010485_02734;product=putative electron transfer flavoprotein-quinone oxidoreductase YgcN;Dbxref=GO:0005886,GO:0016491;gene=ygcN;Parent=GCA000010485_02734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0644,KEGG:K00313,RefSeq:WP_001296323.1,SO:0001217,UniParc:UPI0001C22D73,UniRef:UniRef100_A0A066T375,UniRef:UniRef50_Q46904,UniRef:UniRef90_Q46904;ec_number=1.5.5.-
contig_1	Pyrodigal	gene	2777780	2778040	.	+	.	ID=GCA000010485_02735_gene;locus_tag=GCA000010485_02735;gene=fixX
contig_1	Pyrodigal	CDS	2777780	2778040	.	+	0	ID=GCA000010485_02735;Name=Ferredoxin-like protein;locus_tag=GCA000010485_02735;product=Ferredoxin-like protein;gene=fixX;Parent=GCA000010485_02735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2440,KEGG:K03855,RefSeq:WP_000109516.1,SO:0001217,UniParc:UPI0001C22D74,UniRef:UniRef100_A0A066T317,UniRef:UniRef50_A0A0H2V1G2,UniRef:UniRef90_A0A0H2V1G2
contig_1	Pyrodigal	gene	2778057	2778632	.	+	.	ID=GCA000010485_02736_gene;locus_tag=GCA000010485_02736;gene=ygcP
contig_1	Pyrodigal	CDS	2778057	2778632	.	+	0	ID=GCA000010485_02736;Name=putative protein YgcP;locus_tag=GCA000010485_02736;product=putative protein YgcP;Dbxref=GO:0006071,GO:0006355;gene=ygcP;Parent=GCA000010485_02736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1954,COG:K,KEGG:K02443,RefSeq:WP_001130258.1,SO:0001217,UniParc:UPI0001C22D75,UniRef:UniRef100_A0A7I0L160,UniRef:UniRef50_Q46906,UniRef:UniRef90_Q46906
contig_1	Pyrodigal	gene	2778780	2779640	.	-	.	ID=GCA000010485_02737_gene;locus_tag=GCA000010485_02737
contig_1	Pyrodigal	CDS	2778780	2779640	.	-	0	ID=GCA000010485_02737;Name=Flavoprotein;locus_tag=GCA000010485_02737;product=Flavoprotein;Parent=GCA000010485_02737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296324.1,SO:0001217,UniParc:UPI0001C22D76,UniRef:UniRef100_A0A061YKB7,UniRef:UniRef50_A0A0B0VZE3,UniRef:UniRef90_A0A0B0VZE3
contig_1	Pyrodigal	gene	2779637	2780416	.	-	.	ID=GCA000010485_02738_gene;locus_tag=GCA000010485_02738;gene=ygcR
contig_1	Pyrodigal	CDS	2779637	2780416	.	-	0	ID=GCA000010485_02738;Name=Putative electron transfer flavoprotein subunit YgcR;locus_tag=GCA000010485_02738;product=Putative electron transfer flavoprotein subunit YgcR;Dbxref=GO:0009055;gene=ygcR;Parent=GCA000010485_02738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03521,RefSeq:WP_001296325.1,SO:0001217,UniParc:UPI00021859AF,UniRef:UniRef100_A0A066SV16,UniRef:UniRef50_Q46908,UniRef:UniRef90_Q46908
contig_1	Pyrodigal	gene	2780394	2781803	.	-	.	ID=GCA000010485_02739_gene;locus_tag=GCA000010485_02739;gene=ygcS
contig_1	Pyrodigal	CDS	2780394	2781803	.	-	0	ID=GCA000010485_02739;Name=Inner membrane metabolite transport protein YgcS;locus_tag=GCA000010485_02739;product=Inner membrane metabolite transport protein YgcS;Dbxref=GO:0005886,GO:0022857;gene=ygcS;Parent=GCA000010485_02739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000218265.1,SO:0001217,UniParc:UPI0001C22D78,UniRef:UniRef100_A0AAF0NH20,UniRef:UniRef50_Q46909,UniRef:UniRef90_Q46909
contig_1	Pyrodigal	gene	2781825	2783279	.	-	.	ID=GCA000010485_02740_gene;locus_tag=GCA000010485_02740;gene=ygcU
contig_1	Pyrodigal	CDS	2781825	2783279	.	-	0	ID=GCA000010485_02740;Name=putative FAD-linked oxidoreductase YgcU;locus_tag=GCA000010485_02740;product=putative FAD-linked oxidoreductase YgcU;Dbxref=GO:0004458,GO:0005777,GO:0008609,GO:0008610,GO:0008720,GO:0050660,GO:0071949,GO:1903457;gene=ygcU;Parent=GCA000010485_02740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000059422.1,SO:0001217,UniParc:UPI0001C22D79,UniRef:UniRef100_A0A3K2VZQ1,UniRef:UniRef50_Q46911,UniRef:UniRef90_Q46911;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2783349	2784134	.	-	.	ID=GCA000010485_02741_gene;locus_tag=GCA000010485_02741;gene=ygcW
contig_1	Pyrodigal	CDS	2783349	2784134	.	-	0	ID=GCA000010485_02741;Name=putative oxidoreductase YgcW;locus_tag=GCA000010485_02741;product=putative oxidoreductase YgcW;Dbxref=GO:0006974,GO:0016616;gene=ygcW;Parent=GCA000010485_02741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000021342.1,SO:0001217,UniParc:UPI0000DACF80,UniRef:UniRef100_E2QQL7,UniRef:UniRef50_P76633,UniRef:UniRef90_P76633;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2784453	2785730	.	+	.	ID=GCA000010485_02742_gene;locus_tag=GCA000010485_02742;gene=yqcE
contig_1	Pyrodigal	CDS	2784453	2785730	.	+	0	ID=GCA000010485_02742;Name=Inner membrane protein YqcE;locus_tag=GCA000010485_02742;product=Inner membrane protein YqcE;Dbxref=GO:0005886,GO:0022857;gene=yqcE;Parent=GCA000010485_02742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26602,RefSeq:WP_001164534.1,SO:0001217,UniParc:UPI000187BE6B,UniRef:UniRef100_A0A061YKC2,UniRef:UniRef50_P77031,UniRef:UniRef90_P77031
contig_1	Pyrodigal	gene	2785757	2787235	.	+	.	ID=GCA000010485_02743_gene;locus_tag=GCA000010485_02743
contig_1	Pyrodigal	CDS	2785757	2787235	.	+	0	ID=GCA000010485_02743;Name=Putative sugar kinase;locus_tag=GCA000010485_02743;product=Putative sugar kinase;Parent=GCA000010485_02743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000039736.1,SO:0001217,UniParc:UPI0001C22D7A,UniRef:UniRef100_A0A066SV12,UniRef:UniRef50_P55138,UniRef:UniRef90_A0A376PR25
contig_1	Pyrodigal	gene	2787400	2788320	.	+	.	ID=GCA000010485_02744_gene;locus_tag=GCA000010485_02744
contig_1	Pyrodigal	CDS	2787400	2788320	.	+	0	ID=GCA000010485_02744;Name=aminoimidazole riboside kinase;locus_tag=GCA000010485_02744;product=aminoimidazole riboside kinase;Dbxref=GO:0016301;Parent=GCA000010485_02744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000107665.1,SO:0001217,UniParc:UPI0001C22D7B,UniRef:UniRef100_A0A066T367,UniRef:UniRef50_P26420,UniRef:UniRef90_A0A376PSY2
contig_1	Pyrodigal	gene	2788488	2790005	.	+	.	ID=GCA000010485_02745_gene;locus_tag=GCA000010485_02745
contig_1	Pyrodigal	CDS	2788488	2790005	.	+	0	ID=GCA000010485_02745;Name=Carbohydrate porin;locus_tag=GCA000010485_02745;product=Carbohydrate porin;Parent=GCA000010485_02745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16077,RefSeq:WP_000277210.1,SO:0001217,UniParc:UPI0001C22D7C,UniRef:UniRef100_A0A061YHY1,UniRef:UniRef50_P22340,UniRef:UniRef90_A0A0C2EGG4
contig_1	Pyrodigal	gene	2790066	2791436	.	+	.	ID=GCA000010485_02746_gene;locus_tag=GCA000010485_02746;gene=scrA
contig_1	Pyrodigal	CDS	2790066	2791436	.	+	0	ID=GCA000010485_02746;Name=PTS system sucrose-specific EIIBC component;locus_tag=GCA000010485_02746;product=PTS system sucrose-specific EIIBC component;Dbxref=GO:0005886,GO:0009401,GO:0015771,GO:0016301,GO:0022878,GO:0090589;gene=scrA;Parent=GCA000010485_02746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000344912.1,SO:0001217,UniParc:UPI00003BF86D,UniRef:UniRef100_Q6EVL4,UniRef:UniRef50_P08470,UniRef:UniRef90_P27219
contig_1	Pyrodigal	gene	2791442	2792845	.	+	.	ID=GCA000010485_02747_gene;locus_tag=GCA000010485_02747
contig_1	Pyrodigal	CDS	2791442	2792845	.	+	0	ID=GCA000010485_02747;Name=Sucrose-6-phosphate hydrolase;locus_tag=GCA000010485_02747;product=Sucrose-6-phosphate hydrolase;Parent=GCA000010485_02747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021859B4,UniRef:UniRef100_A0A0A2S037,UniRef:UniRef50_P27217,UniRef:UniRef90_Q6EVL5
contig_1	Pyrodigal	gene	2792871	2793878	.	+	.	ID=GCA000010485_02748_gene;locus_tag=GCA000010485_02748;gene=lacI
contig_1	Pyrodigal	CDS	2792871	2793878	.	+	0	ID=GCA000010485_02748;Name=LacI family DNA-binding transcriptional regulator;locus_tag=GCA000010485_02748;product=LacI family DNA-binding transcriptional regulator;gene=lacI;Parent=GCA000010485_02748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001232702.1,SO:0001217,UniParc:UPI00004C4C23,UniRef:UniRef100_Q5GQ86,UniRef:UniRef50_P37077,UniRef:UniRef90_Q5GQ86
contig_1	Pyrodigal	gene	2793963	2794634	.	-	.	ID=GCA000010485_02749_gene;locus_tag=GCA000010485_02749;gene=queE
contig_1	Pyrodigal	CDS	2793963	2794634	.	-	0	ID=GCA000010485_02749;Name=7-carboxy-7-deazaguanine synthase QueE;locus_tag=GCA000010485_02749;product=7-carboxy-7-deazaguanine synthase QueE;Dbxref=GO:0000287,GO:0005829,GO:0006400,GO:0008616,GO:0016840,GO:0032153,GO:0032466,GO:0051539,GO:1904047;gene=queE;Parent=GCA000010485_02749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_001199974.1,SO:0001217,UniParc:UPI00000DEF58,UniRef:UniRef100_Q6EVL6,UniRef:UniRef50_P64554,UniRef:UniRef90_P64554;ec_number=4.3.99.3
contig_1	Pyrodigal	gene	2794807	2794914	.	+	.	ID=GCA000010485_02750_gene;locus_tag=GCA000010485_02750
contig_1	Pyrodigal	CDS	2794807	2794914	.	+	0	ID=GCA000010485_02750;Name=Small protein involved in the cell envelope stress response;locus_tag=GCA000010485_02750;product=Small protein involved in the cell envelope stress response;Parent=GCA000010485_02750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E8B26E,UniRef:UniRef100_A0AA36P7W3,UniRef:UniRef50_A0AA36P7W3,UniRef:UniRef90_A0AA36P7W3
contig_1	Pyrodigal	gene	2794928	2795800	.	+	.	ID=GCA000010485_02751_gene;locus_tag=GCA000010485_02751;gene=ygcG
contig_1	Pyrodigal	CDS	2794928	2795800	.	+	0	ID=GCA000010485_02751;Name=UPF0603 protein YgcG;locus_tag=GCA000010485_02751;product=UPF0603 protein YgcG;Dbxref=GO:0005886;gene=ygcG;Parent=GCA000010485_02751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001268442.1,SO:0001217,UniParc:UPI0001C22D7E,UniRef:UniRef100_A0A061YHY7,UniRef:UniRef50_P55140,UniRef:UniRef90_P55140
contig_1	Pyrodigal	gene	2795860	2797158	.	-	.	ID=GCA000010485_02752_gene;locus_tag=GCA000010485_02752;gene=eno
contig_1	Pyrodigal	CDS	2795860	2797158	.	-	0	ID=GCA000010485_02752;Name=phosphopyruvate hydratase;locus_tag=GCA000010485_02752;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000010485_02752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_000036723.1,SO:0001217,UniParc:UPI00001639F9,UniRef:UniRef100_P0A6P9,UniRef:UniRef50_P0A6P9,UniRef:UniRef90_P0A6P9;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	2797246	2798883	.	-	.	ID=GCA000010485_02753_gene;locus_tag=GCA000010485_02753;gene=pyrG
contig_1	Pyrodigal	CDS	2797246	2798883	.	-	0	ID=GCA000010485_02753;Name=glutamine hydrolyzing CTP synthase;locus_tag=GCA000010485_02753;product=glutamine hydrolyzing CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000010485_02753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,KEGG:K01937,RefSeq:WP_000210878.1,SO:0001217,UniParc:UPI00001639FA,UniRef:UniRef100_P0A7E5,UniRef:UniRef50_P0A7E5,UniRef:UniRef90_P0A7E5;ec_number=6.3.4.2
contig_1	Pyrodigal	gene	2799111	2799902	.	-	.	ID=GCA000010485_02754_gene;locus_tag=GCA000010485_02754;gene=mazG
contig_1	Pyrodigal	CDS	2799111	2799902	.	-	0	ID=GCA000010485_02754;Name=nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA000010485_02754;product=nucleoside triphosphate pyrophosphohydrolase;Dbxref=GO:0005524,GO:0006203,GO:0009267,GO:0046047,GO:0046052,GO:0046061,GO:0046076,GO:0046081,GO:0046872,GO:0047429,GO:0047693;gene=mazG;Parent=GCA000010485_02754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3956,COG:R,RefSeq:WP_001071631.1,SO:0001217,UniParc:UPI0001C22D7F,UniRef:UniRef100_A0A061L971,UniRef:UniRef50_P0AEY3,UniRef:UniRef90_P0AEY3;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	2799998	2802232	.	-	.	ID=GCA000010485_02755_gene;locus_tag=GCA000010485_02755;gene=relA
contig_1	Pyrodigal	CDS	2799998	2802232	.	-	0	ID=GCA000010485_02755;Name=GTP diphosphokinase;locus_tag=GCA000010485_02755;product=GTP diphosphokinase;Dbxref=GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0008893,GO:0015969,GO:0015970,GO:0016301,GO:0042594;gene=relA;Parent=GCA000010485_02755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,RefSeq:WP_000226815.1,SO:0001217,UniParc:UPI0000133659,UniRef:UniRef100_P0AG20,UniRef:UniRef50_P0AG20,UniRef:UniRef90_P0AG20;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	2802280	2803581	.	-	.	ID=GCA000010485_02756_gene;locus_tag=GCA000010485_02756;gene=rlmD
contig_1	Pyrodigal	CDS	2802280	2803581	.	-	0	ID=GCA000010485_02756;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA000010485_02756;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0003723,GO:0005506,GO:0006396,GO:0008173,GO:0051539,GO:0070041,GO:0070475;gene=rlmD;Parent=GCA000010485_02756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03215,RefSeq:WP_000046817.1,SO:0001217,UniParc:UPI00000DEF5F,UniRef:UniRef100_Q8FEG6,UniRef:UniRef50_P55135,UniRef:UniRef90_P55135;ec_number=2.1.1.190
contig_1	Pyrodigal	gene	2803638	2806394	.	+	.	ID=GCA000010485_02757_gene;locus_tag=GCA000010485_02757;gene=barA
contig_1	Pyrodigal	CDS	2803638	2806394	.	+	0	ID=GCA000010485_02757;Name=two-component sensor histidine kinase BarA;locus_tag=GCA000010485_02757;product=two-component sensor histidine kinase BarA;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0016020,GO:0016310;gene=barA;Parent=GCA000010485_02757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4999,COG:T,RefSeq:WP_000186432.1,SO:0001217,UniParc:UPI0001C22DB2,UniRef:UniRef100_A0A061L433,UniRef:UniRef50_P0AEC5,UniRef:UniRef90_P0AEC5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2806625	2807965	.	-	.	ID=GCA000010485_02758_gene;locus_tag=GCA000010485_02758;gene=gudD
contig_1	Pyrodigal	CDS	2806625	2807965	.	-	0	ID=GCA000010485_02758;Name=glucarate dehydratase;locus_tag=GCA000010485_02758;product=glucarate dehydratase;Dbxref=GO:0000287,GO:0008872,GO:0019394,GO:0042838;gene=gudD;Parent=GCA000010485_02758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,KEGG:K01706,RefSeq:WP_000098246.1,SO:0001217,UniParc:UPI0001C22DB3,UniRef:UniRef100_A0A061L8K2,UniRef:UniRef50_P0AES2,UniRef:UniRef90_P0AES2;ec_number=4.2.1.40
contig_1	Pyrodigal	gene	2807986	2809326	.	-	.	ID=GCA000010485_02759_gene;locus_tag=GCA000010485_02759;gene=gudX
contig_1	Pyrodigal	CDS	2807986	2809326	.	-	0	ID=GCA000010485_02759;Name=Glucarate dehydratase-related protein;locus_tag=GCA000010485_02759;product=Glucarate dehydratase-related protein;Dbxref=GO:0009063,GO:0016829,GO:0044248,GO:0046872;gene=gudX;Parent=GCA000010485_02759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,KEGG:K13918,RefSeq:WP_000211784.1,SO:0001217,UniParc:UPI0001C22DB4,UniRef:UniRef100_A0A066T351,UniRef:UniRef50_P0AES2,UniRef:UniRef90_Q46915;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	2809328	2810680	.	-	.	ID=GCA000010485_02760_gene;locus_tag=GCA000010485_02760;gene=gudP
contig_1	Pyrodigal	CDS	2809328	2810680	.	-	0	ID=GCA000010485_02760;Name=galactarate/glucarate/glycerate transporter GudP;locus_tag=GCA000010485_02760;product=galactarate/glucarate/glycerate transporter GudP;gene=gudP;Parent=GCA000010485_02760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000097072,COG:COG2271,COG:G,RefSeq:WP_000097082.1,SO:0001217,UniParc:UPI00000DEF62,UniRef:UniRef100_A0A1M0V068,UniRef:UniRef50_A8ANZ6,UniRef:UniRef90_A8ANZ6
contig_1	Pyrodigal	gene	2811114	2811563	.	-	.	ID=GCA000010485_02761_gene;locus_tag=GCA000010485_02761;gene=yqcA
contig_1	Pyrodigal	CDS	2811114	2811563	.	-	0	ID=GCA000010485_02761;Name=flavodoxin;locus_tag=GCA000010485_02761;product=flavodoxin;Dbxref=GO:0005829,GO:0010181,GO:0016491,GO:0050660;gene=yqcA;Parent=GCA000010485_02761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_000807757.1,SO:0001217,UniParc:UPI0001C22DB5,UniRef:UniRef100_A0A061YE45,UniRef:UniRef50_P65367,UniRef:UniRef90_P65367
contig_1	Pyrodigal	gene	2811581	2812363	.	-	.	ID=GCA000010485_02762_gene;locus_tag=GCA000010485_02762;gene=truC
contig_1	Pyrodigal	CDS	2811581	2812363	.	-	0	ID=GCA000010485_02762;Name=tRNA pseudouridine(65) synthase TruC;locus_tag=GCA000010485_02762;product=tRNA pseudouridine(65) synthase TruC;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0008033,GO:0009982,GO:0160149;gene=truC;Parent=GCA000010485_02762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06175,RefSeq:WP_000889999.1,SO:0001217,UniParc:UPI00005EF632,UniRef:UniRef100_A0A066T346,UniRef:UniRef50_P0AA41,UniRef:UniRef90_P0AA41;ec_number=5.4.99.26
contig_1	Pyrodigal	gene	2812363	2812692	.	-	.	ID=GCA000010485_02763_gene;locus_tag=GCA000010485_02763;gene=yqcC
contig_1	Pyrodigal	CDS	2812363	2812692	.	-	0	ID=GCA000010485_02763;Name=putative protein YqcC;locus_tag=GCA000010485_02763;product=putative protein YqcC;Dbxref=GO:0044010;gene=yqcC;Parent=GCA000010485_02763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3098,COG:S,RefSeq:WP_000206991.1,SO:0001217,UniParc:UPI0001C22DB6,UniRef:UniRef100_A0A066T2Y5,UniRef:UniRef50_Q46919,UniRef:UniRef90_Q46919
contig_1	Infernal	gene	2812735	2813094	.	-	.	ID=GCA000010485_02764_gene;locus_tag=GCA000010485_02764;gene=csrB
contig_1	Infernal	ncRNA	2812735	2813094	1e-41	-	.	ID=GCA000010485_02764;Name=CsrB/RsmB RNA family;locus_tag=GCA000010485_02764;gene=csrB;product=CsrB/RsmB RNA family;Dbxref=RFAM:RF00018;Parent=GCA000010485_02764_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00018
contig_1	Pyrodigal	gene	2813314	2813859	.	-	.	ID=GCA000010485_02765_gene;locus_tag=GCA000010485_02765;gene=syd
contig_1	Pyrodigal	CDS	2813314	2813859	.	-	0	ID=GCA000010485_02765;Name=SecY-interacting protein;locus_tag=GCA000010485_02765;product=SecY-interacting protein;Dbxref=GO:0009898;gene=syd;Parent=GCA000010485_02765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000342439.1,SO:0001217,UniParc:UPI0001C22DB7,UniRef:UniRef100_A0A2W0HCJ8,UniRef:UniRef50_P0A8U0,UniRef:UniRef90_P0A8U0
contig_1	Pyrodigal	gene	2813927	2814775	.	+	.	ID=GCA000010485_02766_gene;locus_tag=GCA000010485_02766;gene=queF
contig_1	Pyrodigal	CDS	2813927	2814775	.	+	0	ID=GCA000010485_02766;Name=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;locus_tag=GCA000010485_02766;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0043867;gene=queF;Parent=GCA000010485_02766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2904,COG:J,KEGG:K06879,RefSeq:WP_000100411.1,SO:0001217,UniParc:UPI00016A15C2,UniRef:UniRef100_B7NVU2,UniRef:UniRef50_Q46920,UniRef:UniRef90_Q46920;ec_number=1.7.1.13
contig_1	Pyrodigal	gene	2814887	2816251	.	+	.	ID=GCA000010485_02767_gene;locus_tag=GCA000010485_02767;gene=ppnN
contig_1	Pyrodigal	CDS	2814887	2816251	.	+	0	ID=GCA000010485_02767;Name=nucleotide 5'-monophosphate nucleosidase;locus_tag=GCA000010485_02767;product=nucleotide 5'-monophosphate nucleosidase;Dbxref=GO:0005829,GO:0008714,GO:0047405,GO:0047723;gene=ppnN;Parent=GCA000010485_02767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000627995,COG:COG1611,COG:F,KEGG:K06966,RefSeq:WP_000627995.1,SO:0001217,UniParc:UPI000013B053,UniRef:UniRef100_P0ADR8,UniRef:UniRef50_P0ADR8,UniRef:UniRef90_P0ADR8;ec_number=3.2.2.4
contig_1	Pyrodigal	gene	2816808	2818097	.	+	.	ID=GCA000010485_02768_gene;locus_tag=GCA000010485_02768;gene=sdaC
contig_1	Pyrodigal	CDS	2816808	2818097	.	+	0	ID=GCA000010485_02768;Name=HAAAP family serine/threonine permease SdaC;locus_tag=GCA000010485_02768;product=HAAAP family serine/threonine permease SdaC;Dbxref=GO:0005886,GO:0015171,GO:0015293;gene=sdaC;Parent=GCA000010485_02768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000450476,COG:COG0814,COG:E,KEGG:K03837,RefSeq:WP_000450473.1,SO:0001217,UniParc:UPI00000DEF6B,UniRef:UniRef100_E2QQP2,UniRef:UniRef50_P0AAD6,UniRef:UniRef90_P0AAD6
contig_1	Pyrodigal	gene	2818155	2819522	.	+	.	ID=GCA000010485_02769_gene;locus_tag=GCA000010485_02769;gene=sdaB
contig_1	Pyrodigal	CDS	2818155	2819522	.	+	0	ID=GCA000010485_02769;Name=L-serine ammonia-lyase II;locus_tag=GCA000010485_02769;product=L-serine ammonia-lyase II;Dbxref=GO:0003941,GO:0006094,GO:0006565,GO:0046872,GO:0051539;gene=sdaB;Parent=GCA000010485_02769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000626422,COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000626404.1,SO:0001217,UniParc:UPI000000E534,UniRef:UniRef100_E2QQP3,UniRef:UniRef50_P30744,UniRef:UniRef90_P30744;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2819544	2820389	.	+	.	ID=GCA000010485_02770_gene;locus_tag=GCA000010485_02770;gene=xni
contig_1	Pyrodigal	CDS	2819544	2820389	.	+	0	ID=GCA000010485_02770;Name=flap endonuclease Xni;locus_tag=GCA000010485_02770;product=flap endonuclease Xni;Dbxref=GO:0000287,GO:0003677,GO:0008409,GO:0017108,GO:0030955,GO:0033567;gene=xni;Parent=GCA000010485_02770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0258,COG:L,KEGG:K01146,SO:0001217,UniParc:UPI00000DEF6C,UniRef:UniRef100_A0A2I5SSB3,UniRef:UniRef50_P38506,UniRef:UniRef90_P38506;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2820494	2821642	.	-	.	ID=GCA000010485_02771_gene;locus_tag=GCA000010485_02771;gene=fucO
contig_1	Pyrodigal	CDS	2820494	2821642	.	-	0	ID=GCA000010485_02771;Name=lactaldehyde reductase;locus_tag=GCA000010485_02771;product=lactaldehyde reductase;Dbxref=GO:0000166,GO:0004022,GO:0005829,GO:0008198,GO:0008912,GO:0016491,GO:0019301,GO:0042355,GO:0042803,GO:0042846,GO:0051143,GO:0052660,GO:0052661;gene=fucO;Parent=GCA000010485_02771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,KEGG:K00048,RefSeq:WP_001546089.1,SO:0001217,UniParc:UPI0002A33F22,UniRef:UniRef100_A0A086TYE7,UniRef:UniRef50_P0A9S1,UniRef:UniRef90_P0A9S1;ec_number=1.1.1.77
contig_1	Pyrodigal	gene	2821670	2822317	.	-	.	ID=GCA000010485_02772_gene;locus_tag=GCA000010485_02772;gene=fucA
contig_1	Pyrodigal	CDS	2821670	2822317	.	-	0	ID=GCA000010485_02772;Name=L-fuculose-phosphate aldolase;locus_tag=GCA000010485_02772;product=L-fuculose-phosphate aldolase;Dbxref=GO:0005829,GO:0006004,GO:0008270,GO:0008738,GO:0019568,GO:0042355;gene=fucA;Parent=GCA000010485_02772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,RefSeq:WP_000440772.1,SO:0001217,UniParc:UPI00000DEF6E,UniRef:UniRef100_Q8FEF0,UniRef:UniRef50_P0AB87,UniRef:UniRef90_P0AB87;ec_number=4.1.2.17
contig_1	Pyrodigal	gene	2822864	2824180	.	+	.	ID=GCA000010485_02773_gene;locus_tag=GCA000010485_02773;gene=fucP
contig_1	Pyrodigal	CDS	2822864	2824180	.	+	0	ID=GCA000010485_02773;Name=L-fucose:H+ symporter permease;locus_tag=GCA000010485_02773;product=L-fucose:H+ symporter permease;Dbxref=GO:0005886,GO:0006004,GO:0009679,GO:0015150,GO:0015517,GO:0015518,GO:0015535,GO:0015751,GO:0015755,GO:0015756,GO:0015757,GO:0016020;gene=fucP;Parent=GCA000010485_02773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000528587.1,SO:0001217,UniParc:UPI00016A1816,UniRef:UniRef100_E2QQP7,UniRef:UniRef50_P11551,UniRef:UniRef90_P11551
contig_1	Pyrodigal	gene	2824213	2825988	.	+	.	ID=GCA000010485_02774_gene;locus_tag=GCA000010485_02774;gene=fucI
contig_1	Pyrodigal	CDS	2824213	2825988	.	+	0	ID=GCA000010485_02774;Name=L-fucose isomerase;locus_tag=GCA000010485_02774;product=L-fucose isomerase;Dbxref=GO:0005737,GO:0008736,GO:0008790,GO:0019317,GO:0019571,GO:0030145,GO:0042355;gene=fucI;Parent=GCA000010485_02774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2407,COG:G,KEGG:K01818,RefSeq:WP_000724161.1,SO:0001217,UniParc:UPI0000D50BE5,UniRef:UniRef100_B7MLC3,UniRef:UniRef50_P69922,UniRef:UniRef90_Q8Z429;ec_number=5.3.1.25
contig_1	Pyrodigal	gene	2826097	2827515	.	+	.	ID=GCA000010485_02775_gene;locus_tag=GCA000010485_02775;gene=fucK
contig_1	Pyrodigal	CDS	2826097	2827515	.	+	0	ID=GCA000010485_02775;Name=L-fuculokinase;locus_tag=GCA000010485_02775;product=L-fuculokinase;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0008737,GO:0019301,GO:0019571,GO:0042355;gene=fucK;Parent=GCA000010485_02775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K00879,RefSeq:WP_000808363.1,SO:0001217,UniParc:UPI0001C22DB9,UniRef:UniRef100_A0A3K2USS1,UniRef:UniRef50_P11553,UniRef:UniRef90_P11553;ec_number=2.7.1.51
contig_1	Pyrodigal	gene	2827517	2827939	.	+	.	ID=GCA000010485_02776_gene;locus_tag=GCA000010485_02776;gene=fucU
contig_1	Pyrodigal	CDS	2827517	2827939	.	+	0	ID=GCA000010485_02776;Name=L-fucose mutarotase;locus_tag=GCA000010485_02776;product=L-fucose mutarotase;Dbxref=GO:0005737,GO:0016854,GO:0036065,GO:0036373,GO:0042354,GO:0042806;gene=fucU;Parent=GCA000010485_02776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4154,COG:G,KEGG:K02431,RefSeq:WP_000920840.1,SO:0001217,UniParc:UPI000012AD59,UniRef:UniRef100_P0AEN8,UniRef:UniRef50_P0AEN8,UniRef:UniRef90_P0AEN8;ec_number=5.1.3.29
contig_1	Pyrodigal	gene	2827997	2828728	.	+	.	ID=GCA000010485_02777_gene;locus_tag=GCA000010485_02777;gene=fucR
contig_1	Pyrodigal	CDS	2827997	2828728	.	+	0	ID=GCA000010485_02777;Name=L-fucose operon activator;locus_tag=GCA000010485_02777;product=L-fucose operon activator;Dbxref=GO:0003677,GO:0003700,GO:0006004;gene=fucR;Parent=GCA000010485_02777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02430,RefSeq:WP_001385459.1,SO:0001217,UniParc:UPI0001C22DBA,UniRef:UniRef100_A0A3R0MSG0,UniRef:UniRef50_P0ACK8,UniRef:UniRef90_P0ACK8
contig_1	Pyrodigal	gene	2828772	2829872	.	-	.	ID=GCA000010485_02778_gene;locus_tag=GCA000010485_02778;gene=rlmM
contig_1	Pyrodigal	CDS	2828772	2829872	.	-	0	ID=GCA000010485_02778;Name=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;locus_tag=GCA000010485_02778;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0008757,GO:0032259;gene=rlmM;Parent=GCA000010485_02778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2933,COG:J,RefSeq:WP_001045504.1,SO:0001217,UniParc:UPI0001C22DBB,UniRef:UniRef100_A0A7I0KZ16,UniRef:UniRef50_P0ADR6,UniRef:UniRef90_P0ADR6;ec_number=2.1.1.186
contig_1	Pyrodigal	gene	2829865	2830260	.	-	.	ID=GCA000010485_02779_gene;locus_tag=GCA000010485_02779;gene=ygdD
contig_1	Pyrodigal	CDS	2829865	2830260	.	-	0	ID=GCA000010485_02779;Name=UPF0382 inner membrane protein YgdD;locus_tag=GCA000010485_02779;product=UPF0382 inner membrane protein YgdD;Dbxref=GO:0005886;gene=ygdD;Parent=GCA000010485_02779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_000203905.1,SO:0001217,UniParc:UPI000013B04F,UniRef:UniRef100_P0ADR2,UniRef:UniRef50_P0ADR2,UniRef:UniRef90_P0ADR2
contig_1	Pyrodigal	gene	2830279	2831196	.	-	.	ID=GCA000010485_02780_gene;locus_tag=GCA000010485_02780;gene=gcvA
contig_1	Pyrodigal	CDS	2830279	2831196	.	-	0	ID=GCA000010485_02780;Name=glycine cleavage system transcriptional regulator GcvA;locus_tag=GCA000010485_02780;product=glycine cleavage system transcriptional regulator GcvA;Dbxref=GO:0003700,GO:0005737,GO:0006351,GO:0006355,GO:0009411,GO:0043565;gene=gcvA;Parent=GCA000010485_02780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000044401,COG:COG0583,COG:K,KEGG:K03566,RefSeq:WP_000044401.1,SO:0001217,UniParc:UPI000012B377,UniRef:UniRef100_P0A9F6,UniRef:UniRef50_P0A9F6,UniRef:UniRef90_P0A9F6
contig_1	Infernal	gene	2831325	2831530	.	+	.	ID=GCA000010485_02781_gene;locus_tag=GCA000010485_02781;gene=gcvB
contig_1	Infernal	ncRNA	2831325	2831530	1.7e-26	+	.	ID=GCA000010485_02781;Name=GcvB RNA;locus_tag=GCA000010485_02781;gene=gcvB;product=GcvB RNA;Dbxref=RFAM:RF00022;Parent=GCA000010485_02781_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00022
contig_1	Pyrodigal	gene	2831548	2831775	.	-	.	ID=GCA000010485_02782_gene;locus_tag=GCA000010485_02782;gene=ygdI
contig_1	Pyrodigal	CDS	2831548	2831775	.	-	0	ID=GCA000010485_02782;Name=putative lipoprotein YgdI;locus_tag=GCA000010485_02782;product=putative lipoprotein YgdI;Dbxref=GO:0005886;gene=ygdI;Parent=GCA000010485_02782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000750398.1,SO:0001217,UniParc:UPI000013B054,UniRef:UniRef100_P65292,UniRef:UniRef50_P65292,UniRef:UniRef90_P65292
contig_1	Pyrodigal	gene	2831967	2833172	.	+	.	ID=GCA000010485_02783_gene;locus_tag=GCA000010485_02783;gene=csdA
contig_1	Pyrodigal	CDS	2831967	2833172	.	+	0	ID=GCA000010485_02783;Name=cysteine desulfurase CsdA;locus_tag=GCA000010485_02783;product=cysteine desulfurase CsdA;Dbxref=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gene=csdA;Parent=GCA000010485_02783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01766,RefSeq:WP_001296332.1,SO:0001217,UniParc:UPI0001C22DBC,UniRef:UniRef100_A0A066SYG7,UniRef:UniRef50_Q46925,UniRef:UniRef90_A0A426PAE7;ec_number=4.4.1.-
contig_1	Pyrodigal	gene	2833172	2833615	.	+	.	ID=GCA000010485_02784_gene;locus_tag=GCA000010485_02784;gene=csdE
contig_1	Pyrodigal	CDS	2833172	2833615	.	+	0	ID=GCA000010485_02784;Name=cysteine desulfurase sulfur acceptor subunit CsdE;locus_tag=GCA000010485_02784;product=cysteine desulfurase sulfur acceptor subunit CsdE;Dbxref=GO:0061504,GO:0097163;gene=csdE;Parent=GCA000010485_02784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2166,COG:OJ,RefSeq:WP_000184272.1,SO:0001217,UniParc:UPI00000DEF76,UniRef:UniRef100_A0A066SUI8,UniRef:UniRef50_P0AGF2,UniRef:UniRef90_P0AGF2
contig_1	Pyrodigal	gene	2833666	2834472	.	-	.	ID=GCA000010485_02785_gene;locus_tag=GCA000010485_02785;gene=tcdA
contig_1	Pyrodigal	CDS	2833666	2834472	.	-	0	ID=GCA000010485_02785;Name=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;locus_tag=GCA000010485_02785;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;Dbxref=GO:0005524,GO:0008641,GO:0016020,GO:0030955,GO:0031402,GO:0042803,GO:0061503,GO:0061504;gene=tcdA;Parent=GCA000010485_02785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_000117716.1,SO:0001217,UniParc:UPI00005EF627,UniRef:UniRef100_E2QQQ8,UniRef:UniRef50_Q46927,UniRef:UniRef90_Q46927;ec_number=6.1.-.-
contig_1	Pyrodigal	gene	2834549	2835646	.	-	.	ID=GCA000010485_02786_gene;locus_tag=GCA000010485_02786;gene=mltA
contig_1	Pyrodigal	CDS	2834549	2835646	.	-	0	ID=GCA000010485_02786;Name=murein transglycosylase A;locus_tag=GCA000010485_02786;product=murein transglycosylase A;Dbxref=GO:0000270,GO:0004553,GO:0008933,GO:0009253,GO:0009254,GO:0009279,GO:0019867,GO:0030288,GO:0071555;gene=mltA;Parent=GCA000010485_02786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678650.1,SO:0001217,UniParc:UPI00016088E8,UniRef:UniRef100_E2QQQ9,UniRef:UniRef50_P0A935,UniRef:UniRef90_P0A935;ec_number=4.2.2.n1
contig_1	tRNAscan-SE	gene	2835855	2835931	.	+	.	ID=GCA000010485_02787_gene;locus_tag=GCA000010485_02787;gene=trnfM
contig_1	tRNAscan-SE	tRNA	2835855	2835931	.	+	.	ID=GCA000010485_02787;Name=tRNA-fMet(cat);locus_tag=GCA000010485_02787;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000010485_02787_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	2835965	2836041	.	+	.	ID=GCA000010485_02788_gene;locus_tag=GCA000010485_02788;gene=trnfM
contig_1	tRNAscan-SE	tRNA	2835965	2836041	.	+	.	ID=GCA000010485_02788;Name=tRNA-fMet(cat);locus_tag=GCA000010485_02788;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000010485_02788_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	2836075	2836151	.	+	.	ID=GCA000010485_02789_gene;locus_tag=GCA000010485_02789;gene=trnfM
contig_1	tRNAscan-SE	tRNA	2836075	2836151	.	+	.	ID=GCA000010485_02789;Name=tRNA-fMet(cat);locus_tag=GCA000010485_02789;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000010485_02789_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	2836787	2837287	.	+	.	ID=GCA000010485_02790_gene;locus_tag=GCA000010485_02790;gene=tssB
contig_1	Pyrodigal	CDS	2836787	2837287	.	+	0	ID=GCA000010485_02790;Name=type VI secretion system contractile sheath small subunit;locus_tag=GCA000010485_02790;product=type VI secretion system contractile sheath small subunit;Dbxref=GO:0033103;gene=tssB;Parent=GCA000010485_02790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296334.1,SO:0001217,UniParc:UPI0001C22DBD,UniRef:UniRef100_X5FEF0,UniRef:UniRef50_X5FUI7,UniRef:UniRef90_X5FUI7
contig_1	Pyrodigal	gene	2837346	2838884	.	+	.	ID=GCA000010485_02791_gene;locus_tag=GCA000010485_02791;gene=tssC
contig_1	Pyrodigal	CDS	2837346	2838884	.	+	0	ID=GCA000010485_02791;Name=type VI secretion system contractile sheath large subunit;locus_tag=GCA000010485_02791;product=type VI secretion system contractile sheath large subunit;Dbxref=GO:0033103,GO:0033104;gene=tssC;Parent=GCA000010485_02791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296335.1,SO:0001217,UniParc:UPI0001C22DBE,UniRef:UniRef100_X5F704,UniRef:UniRef50_A0A0H3EKI7,UniRef:UniRef90_A0A0H3EKI7
contig_1	Pyrodigal	gene	2838902	2840239	.	+	.	ID=GCA000010485_02792_gene;locus_tag=GCA000010485_02792;gene=tssK
contig_1	Pyrodigal	CDS	2838902	2840239	.	+	0	ID=GCA000010485_02792;Name=type VI secretion system baseplate subunit TssK;locus_tag=GCA000010485_02792;product=type VI secretion system baseplate subunit TssK;Dbxref=GO:0033103;gene=tssK;Parent=GCA000010485_02792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11893,RefSeq:WP_000690901.1,SO:0001217,UniParc:UPI0001C22DBF,UniRef:UniRef100_X5FUZ8,UniRef:UniRef50_A0A0H3GRZ0,UniRef:UniRef90_X5FDW9
contig_1	Pyrodigal	gene	2840236	2840901	.	+	.	ID=GCA000010485_02793_gene;locus_tag=GCA000010485_02793;gene=tssL
contig_1	Pyrodigal	CDS	2840236	2840901	.	+	0	ID=GCA000010485_02793;Name=type VI secretion system protein TssL%2C short form;locus_tag=GCA000010485_02793;product=type VI secretion system protein TssL%2C short form;gene=tssL;Parent=GCA000010485_02793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000712316.1,SO:0001217,UniParc:UPI0001C22DC0,UniRef:UniRef100_X5FX12,UniRef:UniRef50_X5FDR9,UniRef:UniRef90_X5FDR9
contig_1	Pyrodigal	gene	2840914	2842566	.	+	.	ID=GCA000010485_02794_gene;locus_tag=GCA000010485_02794;gene=ompA
contig_1	Pyrodigal	CDS	2840914	2842566	.	+	0	ID=GCA000010485_02794;Name=OmpA family protein;locus_tag=GCA000010485_02794;product=OmpA family protein;gene=ompA;Parent=GCA000010485_02794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001243155.1,SO:0001217,UniParc:UPI0001C22DC1,UniRef:UniRef100_A0A066T315,UniRef:UniRef50_A0A8B4TXX1,UniRef:UniRef90_A0A8S0FMV1
contig_1	Pyrodigal	gene	2842624	2843115	.	+	.	ID=GCA000010485_02795_gene;locus_tag=GCA000010485_02795;gene=ctsH1
contig_1	Pyrodigal	CDS	2842624	2843115	.	+	0	ID=GCA000010485_02795;Name=Hcp family T6SS protein CtsH1;locus_tag=GCA000010485_02795;product=Hcp family T6SS protein CtsH1;gene=ctsH1;Parent=GCA000010485_02795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11903,RefSeq:WP_000997068.1,SO:0001217,UniParc:UPI0000043A00,UniRef:UniRef100_E2QQR5,UniRef:UniRef50_X5FUJ5,UniRef:UniRef90_X5FUJ5
contig_1	Pyrodigal	gene	2843306	2845942	.	+	.	ID=GCA000010485_02796_gene;locus_tag=GCA000010485_02796;gene=tssH
contig_1	Pyrodigal	CDS	2843306	2845942	.	+	0	ID=GCA000010485_02796;Name=type VI secretion system ATPase TssH;locus_tag=GCA000010485_02796;product=type VI secretion system ATPase TssH;Dbxref=GO:0016887,GO:0033103,GO:0033104;gene=tssH;Parent=GCA000010485_02796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11907,RefSeq:WP_000147345.1,SO:0001217,UniParc:UPI0001C22DED,UniRef:UniRef100_UPI0001C22DED,UniRef:UniRef50_X5FED1,UniRef:UniRef90_X5FED1
contig_1	Pyrodigal	gene	2845954	2848461	.	+	.	ID=GCA000010485_02797_gene;locus_tag=GCA000010485_02797;gene=vgrG1
contig_1	Pyrodigal	CDS	2845954	2848461	.	+	0	ID=GCA000010485_02797;Name=Actin cross-linking toxin VgrG1;locus_tag=GCA000010485_02797;product=Actin cross-linking toxin VgrG1;gene=vgrG1;Parent=GCA000010485_02797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11904,RefSeq:WP_024210482.1,SO:0001217,UniParc:UPI0002EEAE55,UniRef:UniRef100_UPI0002EEAE55,UniRef:UniRef50_A0A2H2VB49,UniRef:UniRef90_A0A2H2VB49
contig_1	Pyrodigal	gene	2848448	2849086	.	+	.	ID=GCA000010485_02798_gene;locus_tag=GCA000010485_02798
contig_1	Pyrodigal	CDS	2848448	2849086	.	+	0	ID=GCA000010485_02798;Name=Transglycosylase SLT domain-containing protein;locus_tag=GCA000010485_02798;product=Transglycosylase SLT domain-containing protein;Parent=GCA000010485_02798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000767040.1,SO:0001217,UniParc:UPI0001C22DEF,UniRef:UniRef100_UPI0001C22DEF,UniRef:UniRef50_A0A8S0FN34,UniRef:UniRef90_A0A8S0FN34
contig_1	Pyrodigal	gene	2849088	2849639	.	+	.	ID=GCA000010485_02799_gene;locus_tag=GCA000010485_02799
contig_1	Pyrodigal	CDS	2849088	2849639	.	+	0	ID=GCA000010485_02799;Name=TLDc domain-containing protein;locus_tag=GCA000010485_02799;product=TLDc domain-containing protein;Parent=GCA000010485_02799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015C4D4C,UniRef:UniRef100_A0A1X9VAW9,UniRef:UniRef50_A0A0K3WAU6,UniRef:UniRef90_A0A1X9VAW9
contig_1	Pyrodigal	gene	2849717	2850181	.	+	.	ID=GCA000010485_02800_gene;locus_tag=GCA000010485_02800
contig_1	Pyrodigal	CDS	2849717	2850181	.	+	0	ID=GCA000010485_02800;Name=hypothetical protein;locus_tag=GCA000010485_02800;product=hypothetical protein;Parent=GCA000010485_02800_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	2850239	2850985	.	-	.	ID=GCA000010485_02801_gene;locus_tag=GCA000010485_02801;gene=istB
contig_1	Pyrodigal	CDS	2850239	2850985	.	-	0	ID=GCA000010485_02801;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_02801;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_02801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_1	Pyrodigal	gene	2851000	2852541	.	-	.	ID=GCA000010485_02802_gene;locus_tag=GCA000010485_02802;gene=tnp
contig_1	Pyrodigal	CDS	2851000	2852541	.	-	0	ID=GCA000010485_02802;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_02802;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_02802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_1	Pyrodigal	gene	2852741	2853517	.	+	.	ID=GCA000010485_02803_gene;locus_tag=GCA000010485_02803
contig_1	Pyrodigal	CDS	2852741	2853517	.	+	0	ID=GCA000010485_02803;Name=Type VI secretion protein;locus_tag=GCA000010485_02803;product=Type VI secretion protein;Parent=GCA000010485_02803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X3K2A7,UniRef:UniRef90_UPI0021C62D33
contig_1	Pyrodigal	gene	2853517	2856906	.	+	.	ID=GCA000010485_02804_gene;locus_tag=GCA000010485_02804
contig_1	Pyrodigal	CDS	2853517	2856906	.	+	0	ID=GCA000010485_02804;Name=IcmF-like protein;locus_tag=GCA000010485_02804;product=IcmF-like protein;Parent=GCA000010485_02804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11891,SO:0001217,UniRef:UniRef50_Q1R7L1,UniRef:UniRef90_X5F713
contig_1	Pyrodigal	gene	2856872	2858509	.	+	.	ID=GCA000010485_02805_gene;locus_tag=GCA000010485_02805;gene=tssA
contig_1	Pyrodigal	CDS	2856872	2858509	.	+	0	ID=GCA000010485_02805;Name=type VI secretion system protein TssA;locus_tag=GCA000010485_02805;product=type VI secretion system protein TssA;gene=tssA;Parent=GCA000010485_02805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A2F442,UniRef:UniRef100_A0A0C5F360,UniRef:UniRef50_A0A6G9RJU6,UniRef:UniRef90_X5FD95
contig_1	Pyrodigal	gene	2858515	2859933	.	+	.	ID=GCA000010485_02806_gene;locus_tag=GCA000010485_02806
contig_1	Pyrodigal	CDS	2858515	2859933	.	+	0	ID=GCA000010485_02806;Name=PAAR domain-containing protein;locus_tag=GCA000010485_02806;product=PAAR domain-containing protein;Parent=GCA000010485_02806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531920.1,SO:0001217,UniParc:UPI0002A439DE,UniRef:UniRef100_A0A066SVL4,UniRef:UniRef50_X5FV89,UniRef:UniRef90_X5FV13
contig_1	Pyrodigal	gene	2859926	2860348	.	+	.	ID=GCA000010485_02807_gene;locus_tag=GCA000010485_02807
contig_1	Pyrodigal	CDS	2859926	2860348	.	+	0	ID=GCA000010485_02807;Name=Lipoprotein;locus_tag=GCA000010485_02807;product=Lipoprotein;Parent=GCA000010485_02807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000199056.1,SO:0001217,UniParc:UPI0002A44FB3,UniRef:UniRef100_A0A061YC46,UniRef:UniRef50_A0A0J2B9K9,UniRef:UniRef90_A0A0K4CCD5
contig_1	Pyrodigal	gene	2860908	2862668	.	+	.	ID=GCA000010485_02808_gene;locus_tag=GCA000010485_02808;gene=tssF
contig_1	Pyrodigal	CDS	2860908	2862668	.	+	0	ID=GCA000010485_02808;Name=type VI secretion system baseplate subunit TssF;locus_tag=GCA000010485_02808;product=type VI secretion system baseplate subunit TssF;Dbxref=GO:0033103;gene=tssF;Parent=GCA000010485_02808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3519,COG:U,RefSeq:WP_000342474.1,SO:0001217,UniParc:UPI0001C22DF5,UniRef:UniRef100_UPI0001C22DF5,UniRef:UniRef50_X5F6J3,UniRef:UniRef90_X5F6J3
contig_1	Pyrodigal	gene	2862632	2863711	.	+	.	ID=GCA000010485_02809_gene;locus_tag=GCA000010485_02809;gene=tssG
contig_1	Pyrodigal	CDS	2862632	2863711	.	+	0	ID=GCA000010485_02809;Name=type VI secretion system baseplate subunit TssG;locus_tag=GCA000010485_02809;product=type VI secretion system baseplate subunit TssG;Dbxref=GO:0033103;gene=tssG;Parent=GCA000010485_02809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11895,RefSeq:WP_000373307.1,SO:0001217,UniParc:UPI0001C22DF6,UniRef:UniRef100_A0A7I0L7W3,UniRef:UniRef50_A0A443IEX3,UniRef:UniRef90_B7MLF4
contig_1	Pyrodigal	gene	2863692	2864228	.	+	.	ID=GCA000010485_02810_gene;locus_tag=GCA000010485_02810;gene=tssJ
contig_1	Pyrodigal	CDS	2863692	2864228	.	+	0	ID=GCA000010485_02810;Name=type VI secretion system lipoprotein TssJ;locus_tag=GCA000010485_02810;product=type VI secretion system lipoprotein TssJ;Dbxref=GO:0033103;gene=tssJ;Parent=GCA000010485_02810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000484009.1,SO:0001217,UniParc:UPI0001C22DF7,UniRef:UniRef100_X5F6V1,UniRef:UniRef50_E2QQS8,UniRef:UniRef90_E2QQS8
contig_1	Pyrodigal	gene	2864232	2864660	.	+	.	ID=GCA000010485_02811_gene;locus_tag=GCA000010485_02811;gene=tssE
contig_1	Pyrodigal	CDS	2864232	2864660	.	+	0	ID=GCA000010485_02811;Name=type VI secretion system baseplate subunit TssE;locus_tag=GCA000010485_02811;product=type VI secretion system baseplate subunit TssE;Dbxref=GO:0033103;gene=tssE;Parent=GCA000010485_02811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11905,RefSeq:WP_001143069.1,SO:0001217,UniParc:UPI0001C22DF8,UniRef:UniRef100_A0A7I0KYY3,UniRef:UniRef50_E2QQS9,UniRef:UniRef90_E2QQS9
contig_1	Pyrodigal	gene	2864660	2866036	.	+	.	ID=GCA000010485_02812_gene;locus_tag=GCA000010485_02812;gene=deoW
contig_1	Pyrodigal	CDS	2864660	2866036	.	+	0	ID=GCA000010485_02812;Name=DeoW;locus_tag=GCA000010485_02812;product=DeoW;gene=deoW;Parent=GCA000010485_02812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11911,RefSeq:WP_000157818.1,SO:0001217,UniParc:UPI0001C22DF9,UniRef:UniRef100_A0A7I0L0Y7,UniRef:UniRef50_A0AAN3S2X9,UniRef:UniRef90_X5FEB3
contig_1	Pyrodigal	gene	2866336	2867283	.	-	.	ID=GCA000010485_02813_gene;locus_tag=GCA000010485_02813
contig_1	Pyrodigal	CDS	2866336	2867283	.	-	0	ID=GCA000010485_02813;Name=2-hydroxyacid dehydrogenase;locus_tag=GCA000010485_02813;product=2-hydroxyacid dehydrogenase;Parent=GCA000010485_02813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001546091.1,SO:0001217,UniParc:UPI0002A25688,UniRef:UniRef100_A0A7I0KYW4,UniRef:UniRef50_A0A1V2T1Q3,UniRef:UniRef90_A0A1V2T1Q3
contig_1	Pyrodigal	gene	2867355	2867951	.	-	.	ID=GCA000010485_02814_gene;locus_tag=GCA000010485_02814
contig_1	Pyrodigal	CDS	2867355	2867951	.	-	0	ID=GCA000010485_02814;Name=Posphosugar isomerase;locus_tag=GCA000010485_02814;product=Posphosugar isomerase;Parent=GCA000010485_02814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001066226.1,SO:0001217,UniParc:UPI000187BEF7,UniRef:UniRef100_A0A066T3L9,UniRef:UniRef50_F4LXK4,UniRef:UniRef90_A0A376D2T8
contig_1	Pyrodigal	gene	2867954	2869129	.	-	.	ID=GCA000010485_02815_gene;locus_tag=GCA000010485_02815
contig_1	Pyrodigal	CDS	2867954	2869129	.	-	0	ID=GCA000010485_02815;Name=cysteine-S-conjugate beta-lyase;locus_tag=GCA000010485_02815;product=cysteine-S-conjugate beta-lyase;Parent=GCA000010485_02815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000382412.1,SO:0001217,UniParc:UPI0001C22DFB,UniRef:UniRef100_A0A7I0KYW5,UniRef:UniRef50_A0A376D337,UniRef:UniRef90_A0A376D337
contig_1	Pyrodigal	gene	2869129	2870709	.	-	.	ID=GCA000010485_02816_gene;locus_tag=GCA000010485_02816
contig_1	Pyrodigal	CDS	2869129	2870709	.	-	0	ID=GCA000010485_02816;Name=Bifunctional PTS system maltose and glucose-specific transporter subunits IICB;locus_tag=GCA000010485_02816;product=Bifunctional PTS system maltose and glucose-specific transporter subunits IICB;Parent=GCA000010485_02816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000810555.1,SO:0001217,UniParc:UPI0001C22DFC,UniRef:UniRef100_A0A066SVM7,UniRef:UniRef50_A0A3P6L535,UniRef:UniRef90_A0A3P6L535
contig_1	Pyrodigal	gene	2870741	2871565	.	-	.	ID=GCA000010485_02817_gene;locus_tag=GCA000010485_02817
contig_1	Pyrodigal	CDS	2870741	2871565	.	-	0	ID=GCA000010485_02817;Name=Antiterminator;locus_tag=GCA000010485_02817;product=Antiterminator;Parent=GCA000010485_02817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001546092.1,SO:0001217,UniParc:UPI0002A42D98,UniRef:UniRef100_A0A641BJ40,UniRef:UniRef50_A0A0D6GZL4,UniRef:UniRef90_A0A0D6GZL4
contig_1	Pyrodigal	gene	2871823	2873076	.	-	.	ID=GCA000010485_02818_gene;locus_tag=GCA000010485_02818;gene=amiC
contig_1	Pyrodigal	CDS	2871823	2873076	.	-	0	ID=GCA000010485_02818;Name=N-acetylmuramoyl-L-alanine amidase AmiC;locus_tag=GCA000010485_02818;product=N-acetylmuramoyl-L-alanine amidase AmiC;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0042597,GO:0043093,GO:0051301,GO:0071555;gene=amiC;Parent=GCA000010485_02818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000016907,KEGG:K01448,RefSeq:WP_000016907.1,SO:0001217,UniParc:UPI000012597E,UniRef:UniRef100_P63883,UniRef:UniRef50_P63883,UniRef:UniRef90_P63883;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	2873308	2874639	.	+	.	ID=GCA000010485_02819_gene;locus_tag=GCA000010485_02819;gene=argA
contig_1	Pyrodigal	CDS	2873308	2874639	.	+	0	ID=GCA000010485_02819;Name=amino-acid N-acetyltransferase;locus_tag=GCA000010485_02819;product=amino-acid N-acetyltransferase;Dbxref=GO:0004042,GO:0005737,GO:0006526;gene=argA;Parent=GCA000010485_02819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1246,COG:E,KEGG:K14682,RefSeq:WP_000237947.1,SO:0001217,UniParc:UPI0000125DFD,UniRef:UniRef100_P0A6C5,UniRef:UniRef50_P0A6C5,UniRef:UniRef90_P0A6C5;ec_number=2.3.1.1
contig_1	Pyrodigal	gene	2874721	2876547	.	-	.	ID=GCA000010485_02820_gene;locus_tag=GCA000010485_02820;gene=recD
contig_1	Pyrodigal	CDS	2874721	2876547	.	-	0	ID=GCA000010485_02820;Name=exodeoxyribonuclease V subunit alpha;locus_tag=GCA000010485_02820;product=exodeoxyribonuclease V subunit alpha;Dbxref=GO:0000724,GO:0000725,GO:0003677,GO:0003689,GO:0004386,GO:0005524,GO:0006302,GO:0006310,GO:0006974,GO:0008854,GO:0009338,GO:0016853,GO:0016887,GO:0017116,GO:0043139,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recD;Parent=GCA000010485_02820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_000775932.1,SO:0001217,UniParc:UPI0001C22DFE,UniRef:UniRef100_A0A641BHT5,UniRef:UniRef50_P04993,UniRef:UniRef90_P04993;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	2876547	2880089	.	-	.	ID=GCA000010485_02821_gene;locus_tag=GCA000010485_02821;gene=recB
contig_1	Pyrodigal	CDS	2876547	2880089	.	-	0	ID=GCA000010485_02821;Name=exodeoxyribonuclease V subunit beta;locus_tag=GCA000010485_02821;product=exodeoxyribonuclease V subunit beta;Dbxref=GO:0000287,GO:0000724,GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0004520,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0008854,GO:0009314,GO:0009338,GO:0015616,GO:0016853,GO:0016887,GO:0043138,GO:0044355,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recB;Parent=GCA000010485_02821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K03582,RefSeq:WP_001296343.1,SO:0001217,UniParc:UPI0001C22DFF,UniRef:UniRef100_A0A066SV99,UniRef:UniRef50_P08394,UniRef:UniRef90_P08394;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	2880082	2882970	.	-	.	ID=GCA000010485_02822_gene;locus_tag=GCA000010485_02822;gene=ptrA
contig_1	Pyrodigal	CDS	2880082	2882970	.	-	0	ID=GCA000010485_02822;Name=pitrilysin;locus_tag=GCA000010485_02822;product=pitrilysin;Dbxref=GO:0004222,GO:0006508,GO:0046872;gene=ptrA;Parent=GCA000010485_02822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001138101.1,SO:0001217,UniParc:UPI0001C22E00,UniRef:UniRef100_A0A7I0L0X6,UniRef:UniRef50_P05458,UniRef:UniRef90_A0A066SZ75;ec_number=3.4.24.55
contig_1	Pyrodigal	gene	2883146	2886514	.	-	.	ID=GCA000010485_02823_gene;locus_tag=GCA000010485_02823;gene=recC
contig_1	Pyrodigal	CDS	2883146	2886514	.	-	0	ID=GCA000010485_02823;Name=exodeoxyribonuclease V subunit gamma;locus_tag=GCA000010485_02823;product=exodeoxyribonuclease V subunit gamma;Dbxref=GO:0000724,GO:0000725,GO:0003677,GO:0003678,GO:0005524,GO:0006310,GO:0008854,GO:0009314,GO:0009338,GO:0044355;gene=recC;Parent=GCA000010485_02823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1330,COG:L,KEGG:K03583,RefSeq:WP_000946905.1,SO:0001217,UniParc:UPI0001C22BF5,UniRef:UniRef100_A0A061YLN0,UniRef:UniRef50_P07648,UniRef:UniRef90_P07648;ec_number=3.1.11.5
contig_1	Pyrodigal	gene	2886527	2886850	.	-	.	ID=GCA000010485_02824_gene;locus_tag=GCA000010485_02824;gene=ppdC
contig_1	Pyrodigal	CDS	2886527	2886850	.	-	0	ID=GCA000010485_02824;Name=prepilin-type N-terminal cleavage/methylation domain-containing protein;locus_tag=GCA000010485_02824;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;Dbxref=GO:0016020;gene=ppdC;Parent=GCA000010485_02824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4967,COG:NW,RefSeq:WP_001276486.1,SO:0001217,UniParc:UPI00000E4A5C,UniRef:UniRef100_E2QQU2,UniRef:UniRef50_P08372,UniRef:UniRef90_P08372
contig_1	Pyrodigal	gene	2886835	2887242	.	-	.	ID=GCA000010485_02825_gene;locus_tag=GCA000010485_02825;gene=ygdB
contig_1	Pyrodigal	CDS	2886835	2887242	.	-	0	ID=GCA000010485_02825;Name=DUF2509 domain-containing protein;locus_tag=GCA000010485_02825;product=DUF2509 domain-containing protein;gene=ygdB;Parent=GCA000010485_02825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001078371.1,SO:0001217,UniParc:UPI00000E4A5D,UniRef:UniRef100_A0A067HNF0,UniRef:UniRef50_P08370,UniRef:UniRef90_P08370
contig_1	Pyrodigal	gene	2887239	2887802	.	-	.	ID=GCA000010485_02826_gene;locus_tag=GCA000010485_02826
contig_1	Pyrodigal	CDS	2887239	2887802	.	-	0	ID=GCA000010485_02826;Name=prepilin peptidase-dependent protein;locus_tag=GCA000010485_02826;product=prepilin peptidase-dependent protein;Parent=GCA000010485_02826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02680,RefSeq:WP_001144304.1,SO:0001217,UniParc:UPI0001886559,UniRef:UniRef100_A0A061YJ84,UniRef:UniRef50_B7LNI0,UniRef:UniRef90_A0A0H2Z230
contig_1	Pyrodigal	gene	2887793	2888263	.	-	.	ID=GCA000010485_02827_gene;locus_tag=GCA000010485_02827;gene=ppdA
contig_1	Pyrodigal	CDS	2887793	2888263	.	-	0	ID=GCA000010485_02827;Name=prepilin peptidase-dependent protein;locus_tag=GCA000010485_02827;product=prepilin peptidase-dependent protein;Dbxref=GO:0016020;gene=ppdA;Parent=GCA000010485_02827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,KEGG:K02679,RefSeq:WP_000744690.1,SO:0001217,UniParc:UPI0001C22BF6,UniRef:UniRef100_A0A066SZ81,UniRef:UniRef50_P33554,UniRef:UniRef90_P33554
contig_1	Pyrodigal	gene	2888448	2889242	.	-	.	ID=GCA000010485_02828_gene;locus_tag=GCA000010485_02828;gene=thyA
contig_1	Pyrodigal	CDS	2888448	2889242	.	-	0	ID=GCA000010485_02828;Name=thymidylate synthase;locus_tag=GCA000010485_02828;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259;gene=thyA;Parent=GCA000010485_02828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_000816232.1,SO:0001217,UniParc:UPI000003EB17,UniRef:UniRef100_P0A884,UniRef:UniRef50_P0A884,UniRef:UniRef90_P0A884;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	2889249	2890124	.	-	.	ID=GCA000010485_02829_gene;locus_tag=GCA000010485_02829;gene=lgt
contig_1	Pyrodigal	CDS	2889249	2890124	.	-	0	ID=GCA000010485_02829;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000010485_02829;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0009249,GO:0016020,GO:0042158;gene=lgt;Parent=GCA000010485_02829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_000204658.1,SO:0001217,UniParc:UPI000003EB18,UniRef:UniRef100_P60955,UniRef:UniRef50_P60955,UniRef:UniRef90_P60955;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	2890275	2892521	.	-	.	ID=GCA000010485_02830_gene;locus_tag=GCA000010485_02830;gene=ptsP
contig_1	Pyrodigal	CDS	2890275	2892521	.	-	0	ID=GCA000010485_02830;Name=phosphoenolpyruvate--protein phosphotransferase;locus_tag=GCA000010485_02830;product=phosphoenolpyruvate--protein phosphotransferase;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872;gene=ptsP;Parent=GCA000010485_02830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3605,COG:T,KEGG:K08484,RefSeq:WP_000957939.1,SO:0001217,UniParc:UPI0001C22BF7,UniRef:UniRef100_A0A7I0KYV5,UniRef:UniRef50_P37177,UniRef:UniRef90_P37177;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	2892534	2893064	.	-	.	ID=GCA000010485_02831_gene;locus_tag=GCA000010485_02831;gene=rppH
contig_1	Pyrodigal	CDS	2892534	2893064	.	-	0	ID=GCA000010485_02831;Name=RNA pyrophosphohydrolase;locus_tag=GCA000010485_02831;product=RNA pyrophosphohydrolase;Dbxref=GO:0005737,GO:0006402,GO:0016787,GO:0034353;gene=rppH;Parent=GCA000010485_02831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000564489.1,SO:0001217,UniParc:UPI00001308FB,UniRef:UniRef100_P0A776,UniRef:UniRef50_P0A776,UniRef:UniRef90_P0A776;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	2893417	2893563	.	-	.	ID=GCA000010485_02832_gene;locus_tag=GCA000010485_02832;gene=ygdT
contig_1	Pyrodigal	CDS	2893417	2893563	.	-	0	ID=GCA000010485_02832;Name=Protein YgdT;locus_tag=GCA000010485_02832;product=Protein YgdT;gene=ygdT;Parent=GCA000010485_02832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001525554.1,SO:0001217,UniParc:UPI0002185A18,UniRef:UniRef100_A0AA36P6X0,UniRef:UniRef50_A0A385XJL2,UniRef:UniRef90_A0AAP6AWW3
contig_1	Pyrodigal	gene	2893749	2894438	.	+	.	ID=GCA000010485_02833_gene;locus_tag=GCA000010485_02833;gene=mutH
contig_1	Pyrodigal	CDS	2893749	2894438	.	+	0	ID=GCA000010485_02833;Name=DNA mismatch repair endonuclease MutH;locus_tag=GCA000010485_02833;product=DNA mismatch repair endonuclease MutH;Dbxref=GO:0003677,GO:0004519,GO:0005737,GO:0006298,GO:0006304;gene=mutH;Parent=GCA000010485_02833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3066,COG:L,KEGG:K03573,RefSeq:WP_000082183.1,SO:0001217,UniParc:UPI00000DEF8E,UniRef:UniRef100_B7MLH7,UniRef:UniRef50_P06722,UniRef:UniRef90_P06722
contig_1	Pyrodigal	gene	2894507	2895220	.	+	.	ID=GCA000010485_02834_gene;locus_tag=GCA000010485_02834;gene=ygdQ
contig_1	Pyrodigal	CDS	2894507	2895220	.	+	0	ID=GCA000010485_02834;Name=UPF0053 inner membrane protein YgdQ;locus_tag=GCA000010485_02834;product=UPF0053 inner membrane protein YgdQ;Dbxref=GO:0005886;gene=ygdQ;Parent=GCA000010485_02834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_000895624.1,SO:0001217,UniParc:UPI000013B058,UniRef:UniRef100_P67127,UniRef:UniRef50_P67127,UniRef:UniRef90_P67127
contig_1	Pyrodigal	gene	2895358	2895576	.	+	.	ID=GCA000010485_02835_gene;locus_tag=GCA000010485_02835;gene=ygdR
contig_1	Pyrodigal	CDS	2895358	2895576	.	+	0	ID=GCA000010485_02835;Name=lipoprotein YgdR;locus_tag=GCA000010485_02835;product=lipoprotein YgdR;Dbxref=GO:0005886;gene=ygdR;Parent=GCA000010485_02835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000758655,RefSeq:WP_000758655.1,SO:0001217,UniParc:UPI000013B05A,UniRef:UniRef100_P65294,UniRef:UniRef50_P65294,UniRef:UniRef90_P65294
contig_1	Pyrodigal	gene	2895684	2896724	.	+	.	ID=GCA000010485_02836_gene;locus_tag=GCA000010485_02836;gene=tas
contig_1	Pyrodigal	CDS	2895684	2896724	.	+	0	ID=GCA000010485_02836;Name=NADP(H)-dependent aldo-keto reductase;locus_tag=GCA000010485_02836;product=NADP(H)-dependent aldo-keto reductase;Dbxref=GO:0016491,GO:0047834;gene=tas;Parent=GCA000010485_02836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_001199301.1,SO:0001217,UniParc:UPI0001C22BF8,UniRef:UniRef100_A0A066SVB9,UniRef:UniRef50_P0A9T4,UniRef:UniRef90_P0A9T4
contig_1	Pyrodigal	gene	2896756	2897949	.	-	.	ID=GCA000010485_02837_gene;locus_tag=GCA000010485_02837;gene=lplT
contig_1	Pyrodigal	CDS	2896756	2897949	.	-	0	ID=GCA000010485_02837;Name=lysophospholipid transporter LplT;locus_tag=GCA000010485_02837;product=lysophospholipid transporter LplT;Dbxref=GO:0005886,GO:0006650,GO:0022857,GO:0045332,GO:0051978,GO:0055085;gene=lplT;Parent=GCA000010485_02837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08227,RefSeq:WP_000004602.1,SO:0001217,UniParc:UPI0001C22BF9,UniRef:UniRef100_A0A061YJ96,UniRef:UniRef50_P39196,UniRef:UniRef90_P39196
contig_1	Pyrodigal	gene	2897942	2900101	.	-	.	ID=GCA000010485_02838_gene;locus_tag=GCA000010485_02838;gene=aas
contig_1	Pyrodigal	CDS	2897942	2900101	.	-	0	ID=GCA000010485_02838;Name=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;locus_tag=GCA000010485_02838;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;Dbxref=GO:0005524,GO:0005886,GO:0006631,GO:0008654,GO:0008779,GO:0008922,GO:0031956;gene=aas;Parent=GCA000010485_02838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000899021.1,SO:0001217,UniParc:UPI0001C22BFA,UniRef:UniRef100_A0A066T3Q7,UniRef:UniRef50_P31119,UniRef:UniRef90_P31119;ec_number=6.2.1.47
contig_1	Infernal	gene	2900189	2900276	.	-	.	ID=GCA000010485_02839_gene;locus_tag=GCA000010485_02839;gene=OmrA-B
contig_1	Infernal	ncRNA	2900189	2900276	3.8e-17	-	.	ID=GCA000010485_02839;Name=OmrA-B family;locus_tag=GCA000010485_02839;product=OmrA-B family;Dbxref=RFAM:RF00079;Parent=GCA000010485_02839_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00079
contig_1	Infernal	gene	2900392	2900473	.	-	.	ID=GCA000010485_02840_gene;locus_tag=GCA000010485_02840;gene=OmrA-B
contig_1	Infernal	ncRNA	2900392	2900473	5.8e-15	-	.	ID=GCA000010485_02840;Name=OmrA-B family;locus_tag=GCA000010485_02840;product=OmrA-B family;Dbxref=RFAM:RF00079;Parent=GCA000010485_02840_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00079
contig_1	Pyrodigal	gene	2900687	2901718	.	+	.	ID=GCA000010485_02841_gene;locus_tag=GCA000010485_02841;gene=galR
contig_1	Pyrodigal	CDS	2900687	2901718	.	+	0	ID=GCA000010485_02841;Name=HTH-type transcriptional regulator GalR;locus_tag=GCA000010485_02841;product=HTH-type transcriptional regulator GalR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006012,GO:0006351,GO:0006355,GO:0042802;gene=galR;Parent=GCA000010485_02841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000201041.1,SO:0001217,UniParc:UPI00000DEF94,UniRef:UniRef100_E2QQV7,UniRef:UniRef50_P03024,UniRef:UniRef90_P03024
contig_1	Pyrodigal	gene	2901725	2902987	.	-	.	ID=GCA000010485_02842_gene;locus_tag=GCA000010485_02842;gene=lysA
contig_1	Pyrodigal	CDS	2901725	2902987	.	-	0	ID=GCA000010485_02842;Name=diaminopimelate decarboxylase;locus_tag=GCA000010485_02842;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0030170;gene=lysA;Parent=GCA000010485_02842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_001120720.1,SO:0001217,UniParc:UPI0000DACFA6,UniRef:UniRef100_E2QQV8,UniRef:UniRef50_P00861,UniRef:UniRef90_P00861;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	2903109	2904044	.	+	.	ID=GCA000010485_02843_gene;locus_tag=GCA000010485_02843;gene=lysR
contig_1	Pyrodigal	CDS	2903109	2904044	.	+	0	ID=GCA000010485_02843;Name=DNA-binding transcriptional regulator LysR;locus_tag=GCA000010485_02843;product=DNA-binding transcriptional regulator LysR;Dbxref=GO:0003700,GO:0005737,GO:0006355,GO:0009089,GO:0010628,GO:0043565;gene=lysR;Parent=GCA000010485_02843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000741825,COG:COG0583,COG:K,RefSeq:WP_000741810.1,SO:0001217,UniParc:UPI00005EFAAB,UniRef:UniRef100_E2QQV9,UniRef:UniRef50_P03030,UniRef:UniRef90_P03030
contig_1	Pyrodigal	gene	2904031	2904723	.	-	.	ID=GCA000010485_02844_gene;locus_tag=GCA000010485_02844;gene=ygeA
contig_1	Pyrodigal	CDS	2904031	2904723	.	-	0	ID=GCA000010485_02844;Name=amino acid racemase;locus_tag=GCA000010485_02844;product=amino acid racemase;Dbxref=GO:0008152,GO:0016855;gene=ygeA;Parent=GCA000010485_02844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000848659,KEGG:K25316,RefSeq:WP_000848653.1,SO:0001217,UniParc:UPI0001C22BFB,UniRef:UniRef100_A0A8S0FLQ9,UniRef:UniRef50_A0A8S0FLQ9,UniRef:UniRef90_A0A8S0FLQ9;ec_number=5.1.1.10
contig_1	Pyrodigal	gene	2904852	2906270	.	-	.	ID=GCA000010485_02845_gene;locus_tag=GCA000010485_02845;gene=araE
contig_1	Pyrodigal	CDS	2904852	2906270	.	-	0	ID=GCA000010485_02845;Name=arabinose-proton symporter AraE;locus_tag=GCA000010485_02845;product=arabinose-proton symporter AraE;Dbxref=GO:0005886,GO:0015293;gene=araE;Parent=GCA000010485_02845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000256438,BlastRules:WP_003243899,COG:COG2814,COG:G,RefSeq:WP_000256426.1,SO:0001217,UniParc:UPI0000E4514F,UniRef:UniRef100_A0A066T3S1,UniRef:UniRef50_P0AE24,UniRef:UniRef90_P0AE24
contig_1	Pyrodigal	gene	2906585	2907346	.	-	.	ID=GCA000010485_02846_gene;locus_tag=GCA000010485_02846;gene=kduD
contig_1	Pyrodigal	CDS	2906585	2907346	.	-	0	ID=GCA000010485_02846;Name=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;locus_tag=GCA000010485_02846;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;Dbxref=GO:0000272,GO:0016491,GO:0051287;gene=kduD;Parent=GCA000010485_02846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000603518.1,SO:0001217,UniParc:UPI00005EFAAE,UniRef:UniRef100_J7QH49,UniRef:UniRef50_P37769,UniRef:UniRef90_J7QH49;ec_number=1.1.1.127
contig_1	Pyrodigal	gene	2907376	2908212	.	-	.	ID=GCA000010485_02847_gene;locus_tag=GCA000010485_02847;gene=kduI
contig_1	Pyrodigal	CDS	2907376	2908212	.	-	0	ID=GCA000010485_02847;Name=5-dehydro-4-deoxy-D-glucuronate isomerase;locus_tag=GCA000010485_02847;product=5-dehydro-4-deoxy-D-glucuronate isomerase;Dbxref=GO:0008270,GO:0008697,GO:0019698,GO:0042840,GO:0045490;gene=kduI;Parent=GCA000010485_02847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3717,COG:G,KEGG:K01815,RefSeq:WP_000383248.1,SO:0001217,UniParc:UPI00000DEF9A,UniRef:UniRef100_B7MM49,UniRef:UniRef50_Q46938,UniRef:UniRef90_Q46938;ec_number=5.3.1.17
contig_1	Pyrodigal	gene	2908499	2909680	.	-	.	ID=GCA000010485_02848_gene;locus_tag=GCA000010485_02848;gene=yqeF
contig_1	Pyrodigal	CDS	2908499	2909680	.	-	0	ID=GCA000010485_02848;Name=putative acetyl-CoA acetyltransferase;locus_tag=GCA000010485_02848;product=putative acetyl-CoA acetyltransferase;Dbxref=GO:0003985,GO:0003988,GO:0005737,GO:0071271;gene=yqeF;Parent=GCA000010485_02848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000656017.1,SO:0001217,UniParc:UPI0000E45151,UniRef:UniRef100_A0A061L1M3,UniRef:UniRef50_Q46939,UniRef:UniRef90_Q46939;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	2909935	2911164	.	+	.	ID=GCA000010485_02849_gene;locus_tag=GCA000010485_02849;gene=yqeG
contig_1	Pyrodigal	CDS	2909935	2911164	.	+	0	ID=GCA000010485_02849;Name=Inner membrane transport protein YqeG;locus_tag=GCA000010485_02849;product=Inner membrane transport protein YqeG;Dbxref=GO:0003333,GO:0005886;gene=yqeG;Parent=GCA000010485_02849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000065950.1,SO:0001217,UniParc:UPI000013BEEE,UniRef:UniRef100_P63340,UniRef:UniRef50_P63340,UniRef:UniRef90_P63340
contig_1	tRNAscan-SE	gene	2911481	2911554	.	-	.	ID=GCA000010485_02850_gene;locus_tag=GCA000010485_02850;gene=trnG
contig_1	tRNAscan-SE	tRNA	2911481	2911554	.	-	.	ID=GCA000010485_02850;Name=tRNA-Gly(ccc);locus_tag=GCA000010485_02850;product=tRNA-Gly(ccc);gene=trnG;anti_codon=ccc;amino_acid=Gly;Parent=GCA000010485_02850_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	2911633	2912388	.	-	.	ID=GCA000010485_02851_gene;locus_tag=GCA000010485_02851;gene=actS
contig_1	Pyrodigal	CDS	2911633	2912388	.	-	0	ID=GCA000010485_02851;Name=amidase activator ActS;locus_tag=GCA000010485_02851;product=amidase activator ActS;Dbxref=GO:0004222,GO:0005886,GO:0009279,GO:0032153,GO:0036460;gene=actS;Parent=GCA000010485_02851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001272558.1,SO:0001217,UniParc:UPI0000226454,UniRef:UniRef100_E2QQW6,UniRef:UniRef50_Q46798,UniRef:UniRef90_Q46798
contig_1	Pyrodigal	gene	2912802	2915099	.	+	.	ID=GCA000010485_02852_gene;locus_tag=GCA000010485_02852;gene=xdhA
contig_1	Pyrodigal	CDS	2912802	2915099	.	+	0	ID=GCA000010485_02852;Name=xanthine dehydrogenase molybdenum-binding subunit XdhA;locus_tag=GCA000010485_02852;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;Dbxref=GO:0002197,GO:0004854,GO:0005506,GO:0005737,GO:0006166,GO:0009114,GO:0016491;gene=xdhA;Parent=GCA000010485_02852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000388187.1,SO:0001217,UniParc:UPI0002185A1A,UniRef:UniRef100_A0A066T3Y3,UniRef:UniRef50_Q46799,UniRef:UniRef90_Q46799;ec_number=1.17.1.4
contig_1	Pyrodigal	gene	2915110	2915988	.	+	.	ID=GCA000010485_02853_gene;locus_tag=GCA000010485_02853;gene=xdhB
contig_1	Pyrodigal	CDS	2915110	2915988	.	+	0	ID=GCA000010485_02853;Name=xanthine dehydrogenase FAD-binding subunit XdhB;locus_tag=GCA000010485_02853;product=xanthine dehydrogenase FAD-binding subunit XdhB;Dbxref=GO:0002197,GO:0004854,GO:0005737,GO:0006166,GO:0009114,GO:0016491,GO:0071949;gene=xdhB;Parent=GCA000010485_02853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000459203.1,SO:0001217,UniParc:UPI0001C22BFD,UniRef:UniRef100_A0A066SVV0,UniRef:UniRef50_Q46800,UniRef:UniRef90_Q46800;ec_number=1.17.1.4
contig_1	Pyrodigal	gene	2915985	2916464	.	+	.	ID=GCA000010485_02854_gene;locus_tag=GCA000010485_02854;gene=xdhC
contig_1	Pyrodigal	CDS	2915985	2916464	.	+	0	ID=GCA000010485_02854;Name=xanthine dehydrogenase iron sulfur-binding subunit XdhC;locus_tag=GCA000010485_02854;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;Dbxref=GO:0002197,GO:0005737,GO:0006166,GO:0009114,GO:0016491,GO:0046872,GO:0051537;gene=xdhC;Parent=GCA000010485_02854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001016598.1,SO:0001217,UniParc:UPI0001C22BFE,UniRef:UniRef100_A0A066SVG2,UniRef:UniRef50_Q46801,UniRef:UniRef90_Q46801;ec_number=1.17.1.4
contig_1	Pyrodigal	gene	2916503	2918281	.	-	.	ID=GCA000010485_02855_gene;locus_tag=GCA000010485_02855;gene=uacR
contig_1	Pyrodigal	CDS	2916503	2918281	.	-	0	ID=GCA000010485_02855;Name=Putative uric acid sigma-54-dependent transcriptional regulator UacR;locus_tag=GCA000010485_02855;product=Putative uric acid sigma-54-dependent transcriptional regulator UacR;Dbxref=GO:0005524,GO:0006355,GO:0016887,GO:0019628,GO:0043565;gene=uacR;Parent=GCA000010485_02855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21405,RefSeq:WP_000417783.1,SO:0001217,UniParc:UPI0001C22BFF,UniRef:UniRef100_A0A061KZT6,UniRef:UniRef50_Q46802,UniRef:UniRef90_Q46802
contig_1	Pyrodigal	gene	2918760	2919947	.	+	.	ID=GCA000010485_02856_gene;locus_tag=GCA000010485_02856;gene=ygeW
contig_1	Pyrodigal	CDS	2918760	2919947	.	+	0	ID=GCA000010485_02856;Name=knotted carbamoyltransferase YgeW;locus_tag=GCA000010485_02856;product=knotted carbamoyltransferase YgeW;Dbxref=GO:0004585,GO:0016597,GO:0019240,GO:0042450;gene=ygeW;Parent=GCA000010485_02856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,RefSeq:WP_000859787.1,SO:0001217,UniParc:UPI000187BF3E,UniRef:UniRef100_W8TVY8,UniRef:UniRef50_Q46803,UniRef:UniRef90_Q46803;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	2920005	2921201	.	+	.	ID=GCA000010485_02857_gene;locus_tag=GCA000010485_02857;gene=dpaL
contig_1	Pyrodigal	CDS	2920005	2921201	.	+	0	ID=GCA000010485_02857;Name=diaminopropionate ammonia-lyase;locus_tag=GCA000010485_02857;product=diaminopropionate ammonia-lyase;Dbxref=GO:0008838,GO:0030170,GO:0042803;gene=dpaL;Parent=GCA000010485_02857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01751,RefSeq:WP_000110493.1,SO:0001217,UniParc:UPI0000129736,UniRef:UniRef100_P66899,UniRef:UniRef50_P66899,UniRef:UniRef90_P66899;ec_number=4.3.1.15
contig_1	Pyrodigal	gene	2921259	2922470	.	+	.	ID=GCA000010485_02858_gene;locus_tag=GCA000010485_02858;gene=ygeY
contig_1	Pyrodigal	CDS	2921259	2922470	.	+	0	ID=GCA000010485_02858;Name=YgeY family selenium metabolism-linked hydrolase;locus_tag=GCA000010485_02858;product=YgeY family selenium metabolism-linked hydrolase;Dbxref=GO:0006508,GO:0006526,GO:0008237,GO:0008777,GO:0016787,GO:0046872;gene=ygeY;Parent=GCA000010485_02858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_001107125.1,SO:0001217,UniParc:UPI000013B06D,UniRef:UniRef100_P65807,UniRef:UniRef50_P65807,UniRef:UniRef90_P65807
contig_1	Pyrodigal	gene	2922523	2923908	.	+	.	ID=GCA000010485_02859_gene;locus_tag=GCA000010485_02859;gene=hyuA
contig_1	Pyrodigal	CDS	2922523	2923908	.	+	0	ID=GCA000010485_02859;Name=D-phenylhydantoinase;locus_tag=GCA000010485_02859;product=D-phenylhydantoinase;Dbxref=GO:0004157,GO:0005737,GO:0005829,GO:0006208,GO:0008152,GO:0016812,GO:0046872;gene=hyuA;Parent=GCA000010485_02859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001264442,RefSeq:WP_001264434.1,SO:0001217,UniParc:UPI00005EFAB5,UniRef:UniRef100_Q8FE90,UniRef:UniRef50_Q46806,UniRef:UniRef90_Q46806;ec_number=3.5.2.2
contig_1	Pyrodigal	gene	2923956	2924888	.	+	.	ID=GCA000010485_02860_gene;locus_tag=GCA000010485_02860;gene=arcC
contig_1	Pyrodigal	CDS	2923956	2924888	.	+	0	ID=GCA000010485_02860;Name=carbamate kinase;locus_tag=GCA000010485_02860;product=carbamate kinase;Dbxref=GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000010485_02860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000037984.1,SO:0001217,UniParc:UPI00000DEFA2,UniRef:UniRef100_A0A061L6M4,UniRef:UniRef50_Q46807,UniRef:UniRef90_Q46807;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	2924929	2926554	.	-	.	ID=GCA000010485_02861_gene;locus_tag=GCA000010485_02861;gene=yqeB
contig_1	Pyrodigal	CDS	2924929	2926554	.	-	0	ID=GCA000010485_02861;Name=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;locus_tag=GCA000010485_02861;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;gene=yqeB;Parent=GCA000010485_02861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07402,RefSeq:WP_001020384.1,SO:0001217,UniParc:UPI00005EFAB7,UniRef:UniRef100_A0A0D8W3H5,UniRef:UniRef50_Q46808,UniRef:UniRef90_Q46808
contig_1	Pyrodigal	gene	2926602	2927372	.	-	.	ID=GCA000010485_02862_gene;locus_tag=GCA000010485_02862;gene=yqeC
contig_1	Pyrodigal	CDS	2926602	2927372	.	-	0	ID=GCA000010485_02862;Name=selenium cofactor biosynthesis protein YqeC;locus_tag=GCA000010485_02862;product=selenium cofactor biosynthesis protein YqeC;Dbxref=GO:0005524,GO:0009058;gene=yqeC;Parent=GCA000010485_02862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000835704.1,SO:0001217,UniParc:UPI0001C22C2C,UniRef:UniRef100_A0A7I0L6Q9,UniRef:UniRef50_Q46809,UniRef:UniRef90_Q46809
contig_1	Pyrodigal	gene	2927476	2928054	.	+	.	ID=GCA000010485_02863_gene;locus_tag=GCA000010485_02863;gene=mocA
contig_1	Pyrodigal	CDS	2927476	2928054	.	+	0	ID=GCA000010485_02863;Name=molybdenum cofactor cytidylyltransferase;locus_tag=GCA000010485_02863;product=molybdenum cofactor cytidylyltransferase;Dbxref=GO:0000166,GO:0000287,GO:0006777,GO:0032324,GO:0061602,GO:0070567,GO:1902760;gene=mocA;Parent=GCA000010485_02863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07141,RefSeq:WP_001272860.1,SO:0001217,UniParc:UPI00000DEFA5,UniRef:UniRef100_E2QQX8,UniRef:UniRef50_Q46810,UniRef:UniRef90_Q46810;ec_number=2.7.7.76
contig_1	Pyrodigal	gene	2928376	2931474	.	+	.	ID=GCA000010485_02864_gene;locus_tag=GCA000010485_02864;gene=ygfK
contig_1	Pyrodigal	CDS	2928376	2931474	.	+	0	ID=GCA000010485_02864;Name=putative selenate reductase subunit YgfK;locus_tag=GCA000010485_02864;product=putative selenate reductase subunit YgfK;Dbxref=GO:0005506,GO:0016491,GO:0051536,GO:0051539;gene=ygfK;Parent=GCA000010485_02864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12527,RefSeq:WP_000502368.1,SO:0001217,UniParc:UPI0001C22C2D,UniRef:UniRef100_UPI0001C22C2D,UniRef:UniRef50_Q46811,UniRef:UniRef90_Q46811;ec_number=1.97.1.9
contig_1	Pyrodigal	gene	2931477	2932805	.	+	.	ID=GCA000010485_02865_gene;locus_tag=GCA000010485_02865;gene=ssnA
contig_1	Pyrodigal	CDS	2931477	2932805	.	+	0	ID=GCA000010485_02865;Name=putative aminohydrolase SsnA;locus_tag=GCA000010485_02865;product=putative aminohydrolase SsnA;Dbxref=GO:0016810,GO:0030308,GO:0046872;gene=ssnA;Parent=GCA000010485_02865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000906283.1,SO:0001217,UniParc:UPI0001C22C2E,UniRef:UniRef100_A0A3K2REP5,UniRef:UniRef50_Q46812,UniRef:UniRef90_Q46812;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2932856	2933635	.	+	.	ID=GCA000010485_02866_gene;locus_tag=GCA000010485_02866;gene=ygfM
contig_1	Pyrodigal	CDS	2932856	2933635	.	+	0	ID=GCA000010485_02866;Name=putative protein YgfM;locus_tag=GCA000010485_02866;product=putative protein YgfM;Dbxref=GO:0016491,GO:0071949;gene=ygfM;Parent=GCA000010485_02866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12529,RefSeq:WP_000572450.1,SO:0001217,UniParc:UPI0001C22C2F,UniRef:UniRef100_A0A3H9KQY8,UniRef:UniRef50_P64557,UniRef:UniRef90_P64557
contig_1	Pyrodigal	gene	2933632	2936502	.	+	.	ID=GCA000010485_02867_gene;locus_tag=GCA000010485_02867;gene=xdhD
contig_1	Pyrodigal	CDS	2933632	2936502	.	+	0	ID=GCA000010485_02867;Name=putative hypoxanthine oxidase XdhD;locus_tag=GCA000010485_02867;product=putative hypoxanthine oxidase XdhD;Dbxref=GO:0005506,GO:0006144,GO:0006166,GO:0016491,GO:0051537;gene=xdhD;Parent=GCA000010485_02867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12528,RefSeq:WP_000583655.1,SO:0001217,UniParc:UPI0001C22C30,UniRef:UniRef100_A0A7I0KYT9,UniRef:UniRef50_Q46814,UniRef:UniRef90_Q46814;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2936667	2938067	.	+	.	ID=GCA000010485_02868_gene;locus_tag=GCA000010485_02868;gene=xanQ
contig_1	Pyrodigal	CDS	2936667	2938067	.	+	0	ID=GCA000010485_02868;Name=xanthine/proton symporter XanQ;locus_tag=GCA000010485_02868;product=xanthine/proton symporter XanQ;Dbxref=GO:0005886,GO:0042906,GO:0042907;gene=xanQ;Parent=GCA000010485_02868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001280192,KEGG:K16346,RefSeq:WP_001280192.1,SO:0001217,UniParc:UPI00005EFABD,UniRef:UniRef100_P67444,UniRef:UniRef50_P67444,UniRef:UniRef90_P67444
contig_1	Pyrodigal	gene	2938085	2939401	.	+	.	ID=GCA000010485_02869_gene;locus_tag=GCA000010485_02869;gene=guaD
contig_1	Pyrodigal	CDS	2938085	2939401	.	+	0	ID=GCA000010485_02869;Name=guanine deaminase;locus_tag=GCA000010485_02869;product=guanine deaminase;Dbxref=GO:0005829,GO:0006147,GO:0008270,GO:0008892,GO:0018756,GO:0046098;gene=guaD;Parent=GCA000010485_02869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01487,RefSeq:WP_001296347.1,SO:0001217,UniParc:UPI0000DACFA9,UniRef:UniRef100_A0A1U9TT65,UniRef:UniRef50_P76641,UniRef:UniRef90_P76641;ec_number=3.5.4.3
contig_1	Pyrodigal	gene	2939437	2940804	.	+	.	ID=GCA000010485_02870_gene;locus_tag=GCA000010485_02870;gene=ghxQ
contig_1	Pyrodigal	CDS	2939437	2940804	.	+	0	ID=GCA000010485_02870;Name=guanine/hypoxanthine transporter GhxQ;locus_tag=GCA000010485_02870;product=guanine/hypoxanthine transporter GhxQ;Dbxref=GO:0005886,GO:0015208,GO:0016020,GO:0035344,GO:0098710;gene=ghxQ;Parent=GCA000010485_02870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000012163,KEGG:K06901,RefSeq:WP_000012167.1,SO:0001217,UniParc:UPI00000DEFAB,UniRef:UniRef100_E2QQY5,UniRef:UniRef50_Q46817,UniRef:UniRef90_Q46817
contig_1	Pyrodigal	gene	2940840	2941328	.	-	.	ID=GCA000010485_02871_gene;locus_tag=GCA000010485_02871;gene=ygfS
contig_1	Pyrodigal	CDS	2940840	2941328	.	-	0	ID=GCA000010485_02871;Name=Putative electron transport protein YgfS;locus_tag=GCA000010485_02871;product=Putative electron transport protein YgfS;Dbxref=GO:0046872,GO:0051539;gene=ygfS;Parent=GCA000010485_02871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000838415.1,SO:0001217,UniParc:UPI0000E45156,UniRef:UniRef100_A0A061KYX4,UniRef:UniRef50_Q46819,UniRef:UniRef90_Q46819
contig_1	Pyrodigal	gene	2941328	2943247	.	-	.	ID=GCA000010485_02872_gene;locus_tag=GCA000010485_02872;gene=ygfT
contig_1	Pyrodigal	CDS	2941328	2943247	.	-	0	ID=GCA000010485_02872;Name=formate-dependent uric acid utilization protein YgfT;locus_tag=GCA000010485_02872;product=formate-dependent uric acid utilization protein YgfT;Dbxref=GO:0016491,GO:0019628,GO:0046872,GO:0051536,GO:0051539;gene=ygfT;Parent=GCA000010485_02872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001363023.1,SO:0001217,UniParc:UPI0001886588,UniRef:UniRef100_E2QQY7,UniRef:UniRef50_P37127,UniRef:UniRef90_Q46820
contig_1	Pyrodigal	gene	2943683	2945131	.	+	.	ID=GCA000010485_02873_gene;locus_tag=GCA000010485_02873;gene=uacT
contig_1	Pyrodigal	CDS	2943683	2945131	.	+	0	ID=GCA000010485_02873;Name=urate/proton symporter UacT;locus_tag=GCA000010485_02873;product=urate/proton symporter UacT;Dbxref=GO:0005886,GO:0015143,GO:0015293,GO:0015747,GO:0042906,GO:0042907,GO:1902600;gene=uacT;Parent=GCA000010485_02873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295374,KEGG:K24206,RefSeq:WP_001296348.1,SO:0001217,UniParc:UPI0002610EA8,UniRef:UniRef100_A0A061YNM8,UniRef:UniRef50_Q46821,UniRef:UniRef90_Q46821
contig_1	Pyrodigal	gene	2945133	2945258	.	+	.	ID=GCA000010485_02874_gene;locus_tag=GCA000010485_02874;gene=yqfG
contig_1	Pyrodigal	CDS	2945133	2945258	.	+	0	ID=GCA000010485_02874;Name=putative protein YqfG;locus_tag=GCA000010485_02874;product=putative protein YqfG;gene=yqfG;Parent=GCA000010485_02874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001050745.1,SO:0001217,UniParc:UPI000170F18A,UniRef:UniRef100_A0A135PSN1,UniRef:UniRef50_C1P614,UniRef:UniRef90_C1P614
contig_1	Pyrodigal	gene	2945381	2945929	.	+	.	ID=GCA000010485_02875_gene;locus_tag=GCA000010485_02875;gene=idi
contig_1	Pyrodigal	CDS	2945381	2945929	.	+	0	ID=GCA000010485_02875;Name=isopentenyl-diphosphate Delta-isomerase;locus_tag=GCA000010485_02875;product=isopentenyl-diphosphate Delta-isomerase;Dbxref=GO:0004452,GO:0005737,GO:0008299,GO:0046872,GO:0050992;gene=idi;Parent=GCA000010485_02875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1443,COG:I,RefSeq:WP_001192798.1,SO:0001217,UniParc:UPI0000D50C12,UniRef:UniRef100_B7MM76,UniRef:UniRef50_Q46822,UniRef:UniRef90_Q46822;ec_number=5.3.3.2
contig_1	Pyrodigal	gene	2945972	2947489	.	-	.	ID=GCA000010485_02876_gene;locus_tag=GCA000010485_02876;gene=lysS
contig_1	Pyrodigal	CDS	2945972	2947489	.	-	0	ID=GCA000010485_02876;Name=lysine--tRNA ligase;locus_tag=GCA000010485_02876;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430;gene=lysS;Parent=GCA000010485_02876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_000003071.1,SO:0001217,UniParc:UPI000003EB02,UniRef:UniRef100_P0A8N3,UniRef:UniRef50_P0A8N5,UniRef:UniRef90_P0A8N3;ec_number=6.1.1.6
contig_1	Pyrodigal	gene	2947499	2948380	.	-	.	ID=GCA000010485_02877_gene;locus_tag=GCA000010485_02877;gene=prfB
contig_1	Pyrodigal	CDS	2947499	2948380	.	-	0	ID=GCA000010485_02877;Name=peptide chain release factor 2;locus_tag=GCA000010485_02877;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfB;Parent=GCA000010485_02877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1186,COG:J,KEGG:K02836,RefSeq:WP_000808990.1,SO:0001217,UniParc:UPI00005E366A,UniRef:UniRef100_B7UHU0,UniRef:UniRef50_P07012,UniRef:UniRef90_P07012
contig_1	Pyrodigal	gene	2948688	2950421	.	-	.	ID=GCA000010485_02878_gene;locus_tag=GCA000010485_02878;gene=recJ
contig_1	Pyrodigal	CDS	2948688	2950421	.	-	0	ID=GCA000010485_02878;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA000010485_02878;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0003676,GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA000010485_02878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0608,COG:L,KEGG:K07462,RefSeq:WP_000813195.1,SO:0001217,UniParc:UPI0001C22C32,UniRef:UniRef100_A0A066SVH8,UniRef:UniRef50_P21893,UniRef:UniRef90_P21893;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	2950427	2951137	.	-	.	ID=GCA000010485_02879_gene;locus_tag=GCA000010485_02879;gene=dsbC
contig_1	Pyrodigal	CDS	2950427	2951137	.	-	0	ID=GCA000010485_02879;Name=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;locus_tag=GCA000010485_02879;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;Dbxref=GO:0003756,GO:0015035,GO:0030288,GO:0042597,GO:0042803,GO:0046688,GO:0061077;gene=dsbC;Parent=GCA000010485_02879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_000715230.1,SO:0001217,UniParc:UPI00000E4A60,UniRef:UniRef100_E2QQZ3,UniRef:UniRef50_P0AEG6,UniRef:UniRef90_P0AEG6;ec_number=5.3.4.1
contig_1	Pyrodigal	gene	2951162	2952058	.	-	.	ID=GCA000010485_02880_gene;locus_tag=GCA000010485_02880;gene=xerD
contig_1	Pyrodigal	CDS	2951162	2952058	.	-	0	ID=GCA000010485_02880;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000010485_02880;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000010485_02880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_000806638.1,SO:0001217,UniParc:UPI000003EB06,UniRef:UniRef100_P0A8P8,UniRef:UniRef50_P0A8P8,UniRef:UniRef90_P0A8P8
contig_1	Pyrodigal	gene	2952170	2952691	.	+	.	ID=GCA000010485_02881_gene;locus_tag=GCA000010485_02881;gene=fldB
contig_1	Pyrodigal	CDS	2952170	2952691	.	+	0	ID=GCA000010485_02881;Name=flavodoxin FldB;locus_tag=GCA000010485_02881;product=flavodoxin FldB;Dbxref=GO:0009055,GO:0010181;gene=fldB;Parent=GCA000010485_02881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_001055874.1,SO:0001217,UniParc:UPI000012A8CE,UniRef:UniRef100_P0ABY4,UniRef:UniRef50_P0ABY4,UniRef:UniRef90_P0ABY4
contig_1	Pyrodigal	gene	2952731	2953138	.	-	.	ID=GCA000010485_02882_gene;locus_tag=GCA000010485_02882;gene=ygfX
contig_1	Pyrodigal	CDS	2952731	2953138	.	-	0	ID=GCA000010485_02882;Name=Inner membrane protein YgfX;locus_tag=GCA000010485_02882;product=Inner membrane protein YgfX;Dbxref=GO:0005886,GO:0008360;gene=ygfX;Parent=GCA000010485_02882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000244765.1,SO:0001217,UniParc:UPI00005EFAC5,UniRef:UniRef100_A0A061YMW9,UniRef:UniRef50_Q46824,UniRef:UniRef90_Q46824
contig_1	Pyrodigal	gene	2953119	2953385	.	-	.	ID=GCA000010485_02883_gene;locus_tag=GCA000010485_02883;gene=sdhE
contig_1	Pyrodigal	CDS	2953119	2953385	.	-	0	ID=GCA000010485_02883;Name=FAD assembly factor SdhE;locus_tag=GCA000010485_02883;product=FAD assembly factor SdhE;gene=sdhE;Parent=GCA000010485_02883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000354050.1,SO:0001217,UniParc:UPI0001C22C33,UniRef:UniRef100_A0A8S0FM64,UniRef:UniRef50_A0A0A8VGG6,UniRef:UniRef90_A0A8S0FM64
contig_1	Pyrodigal	gene	2953628	2954608	.	+	.	ID=GCA000010485_02884_gene;locus_tag=GCA000010485_02884;gene=ygfZ
contig_1	Pyrodigal	CDS	2953628	2954608	.	+	0	ID=GCA000010485_02884;Name=tRNA-modifying protein YgfZ;locus_tag=GCA000010485_02884;product=tRNA-modifying protein YgfZ;Dbxref=GO:0005542,GO:0005737,GO:0008033,GO:0009451,GO:0016226;gene=ygfZ;Parent=GCA000010485_02884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0354,COG:O,KEGG:K06980,RefSeq:WP_000886080.1,SO:0001217,UniParc:UPI00005EFAC6,UniRef:UniRef100_Q0TDV3,UniRef:UniRef50_P0ADE8,UniRef:UniRef90_P0ADE8
contig_1	Pyrodigal	gene	2954685	2955344	.	-	.	ID=GCA000010485_02885_gene;locus_tag=GCA000010485_02885;gene=trhA
contig_1	Pyrodigal	CDS	2954685	2955344	.	-	0	ID=GCA000010485_02885;Name=PAQR family membrane homeostatis protein TrhA;locus_tag=GCA000010485_02885;product=PAQR family membrane homeostatis protein TrhA;Dbxref=GO:0019835;gene=trhA;Parent=GCA000010485_02885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1272,COG:U,RefSeq:WP_000250275.1,SO:0001217,UniParc:UPI0001C22C34,UniRef:UniRef100_A0A061YFK2,UniRef:UniRef50_P67153,UniRef:UniRef90_A8APA7
contig_1	Pyrodigal	gene	2955508	2955819	.	-	.	ID=GCA000010485_02886_gene;locus_tag=GCA000010485_02886;gene=yqfB
contig_1	Pyrodigal	CDS	2955508	2955819	.	-	0	ID=GCA000010485_02886;Name=N(4)-acetylcytidine aminohydrolase;locus_tag=GCA000010485_02886;product=N(4)-acetylcytidine aminohydrolase;Dbxref=GO:0005829,GO:0016813,GO:0106251;gene=yqfB;Parent=GCA000010485_02886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09900,RefSeq:WP_001182956.1,SO:0001217,UniParc:UPI00000DEFB5,UniRef:UniRef100_B7MM87,UniRef:UniRef50_P67603,UniRef:UniRef90_A7ZR09;ec_number=3.5.1.135
contig_1	Pyrodigal	gene	2955864	2957297	.	+	.	ID=GCA000010485_02887_gene;locus_tag=GCA000010485_02887;gene=bglA
contig_1	Pyrodigal	CDS	2955864	2957297	.	+	0	ID=GCA000010485_02887;Name=6-phospho-beta-glucosidase BglA;locus_tag=GCA000010485_02887;product=6-phospho-beta-glucosidase BglA;Dbxref=GO:0005829,GO:0008422,GO:0008706,GO:0015926,GO:0016052;gene=bglA;Parent=GCA000010485_02887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001336277,COG:COG2723,COG:G,RefSeq:WP_001296350.1,SO:0001217,UniParc:UPI0002A31E7E,UniRef:UniRef100_A0A061YMX6,UniRef:UniRef50_Q46829,UniRef:UniRef90_Q46829;ec_number=3.2.1.86
contig_1	Pyrodigal	gene	2957463	2960336	.	-	.	ID=GCA000010485_02888_gene;locus_tag=GCA000010485_02888;gene=gcvP
contig_1	Pyrodigal	CDS	2957463	2960336	.	-	0	ID=GCA000010485_02888;Name=aminomethyl-transferring glycine dehydrogenase;locus_tag=GCA000010485_02888;product=aminomethyl-transferring glycine dehydrogenase;Dbxref=GO:0004375,GO:0005829,GO:0005960,GO:0016594,GO:0019464,GO:0030170;gene=gcvP;Parent=GCA000010485_02888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1003,COG:E,KEGG:K00281,RefSeq:WP_000195013.1,SO:0001217,UniParc:UPI0001C22C36,UniRef:UniRef100_A0A641DZS0,UniRef:UniRef50_A7N5C4,UniRef:UniRef90_Q8XD33;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	2960455	2960844	.	-	.	ID=GCA000010485_02889_gene;locus_tag=GCA000010485_02889;gene=gcvH
contig_1	Pyrodigal	CDS	2960455	2960844	.	-	0	ID=GCA000010485_02889;Name=glycine cleavage system protein GcvH;locus_tag=GCA000010485_02889;product=glycine cleavage system protein GcvH;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000010485_02889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_001295377.1,SO:0001217,UniParc:UPI00001654E0,UniRef:UniRef100_P0A6T9,UniRef:UniRef50_P0A6T9,UniRef:UniRef90_P0A6T9
contig_1	Pyrodigal	gene	2960868	2961962	.	-	.	ID=GCA000010485_02890_gene;locus_tag=GCA000010485_02890;gene=gcvT
contig_1	Pyrodigal	CDS	2960868	2961962	.	-	0	ID=GCA000010485_02890;Name=glycine cleavage system aminomethyltransferase GcvT;locus_tag=GCA000010485_02890;product=glycine cleavage system aminomethyltransferase GcvT;Dbxref=GO:0004047,GO:0005737,GO:0005829,GO:0005960,GO:0008483,GO:0019464;gene=gcvT;Parent=GCA000010485_02890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0404,COG:E,RefSeq:WP_000068706.1,SO:0001217,UniParc:UPI0000D50C16,UniRef:UniRef100_B7UHV3,UniRef:UniRef50_P27248,UniRef:UniRef90_P27248;ec_number=2.1.2.10
contig_1	Bakta	gene	2962253	2962336	.	+	.	ID=GCA000010485_02891_gene;locus_tag=GCA000010485_02891;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2962253	2962336	.	+	0	ID=GCA000010485_02891;Name=Transposase;locus_tag=GCA000010485_02891;product=Transposase;Parent=GCA000010485_02891_gene;Note=RefSeq:WP_122083101.1,SO:0001217,UniParc:UPI000EFD8F7F,UniRef:UniRef100_A0A3L0YK17,UniRef:UniRef50_A0A7H9KDQ9,UniRef:UniRef90_A0A3L3HCU0
contig_1	Pyrodigal	gene	2962410	2963612	.	-	.	ID=GCA000010485_02892_gene;locus_tag=GCA000010485_02892;gene=ubiI
contig_1	Pyrodigal	CDS	2962410	2963612	.	-	0	ID=GCA000010485_02892;Name=FAD-dependent 2-octaprenylphenol hydroxylase;locus_tag=GCA000010485_02892;product=FAD-dependent 2-octaprenylphenol hydroxylase;Dbxref=GO:0004497,GO:0005737,GO:0006744,GO:0016705,GO:0016709,GO:0019168,GO:0071949,GO:0110142;gene=ubiI;Parent=GCA000010485_02892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_001192133.1,SO:0001217,UniParc:UPI0001C22C5C,UniRef:UniRef100_A0A066SVI9,UniRef:UniRef50_P25535,UniRef:UniRef90_P25535;ec_number=1.14.13.240
contig_1	Pyrodigal	gene	2963635	2964813	.	-	.	ID=GCA000010485_02893_gene;locus_tag=GCA000010485_02893;gene=ubiH
contig_1	Pyrodigal	CDS	2963635	2964813	.	-	0	ID=GCA000010485_02893;Name=2-octaprenyl-6-methoxyphenyl hydroxylase;locus_tag=GCA000010485_02893;product=2-octaprenyl-6-methoxyphenyl hydroxylase;Dbxref=GO:0005737,GO:0006744,GO:0006979,GO:0008681,GO:0009416,GO:0016709,GO:0071949,GO:0110142;gene=ubiH;Parent=GCA000010485_02893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_000111200.1,SO:0001217,UniParc:UPI0001C22C5D,UniRef:UniRef100_A0A066SZG7,UniRef:UniRef50_P25534,UniRef:UniRef90_P25534;ec_number=1.14.13.-
contig_1	Pyrodigal	gene	2964810	2966135	.	-	.	ID=GCA000010485_02894_gene;locus_tag=GCA000010485_02894;gene=pepP
contig_1	Pyrodigal	CDS	2964810	2966135	.	-	0	ID=GCA000010485_02894;Name=Xaa-Pro aminopeptidase;locus_tag=GCA000010485_02894;product=Xaa-Pro aminopeptidase;Dbxref=GO:0004177,GO:0005829,GO:0006508,GO:0008235,GO:0030145,GO:0032991,GO:0042802,GO:0051289,GO:0070006;gene=pepP;Parent=GCA000010485_02894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_001280386.1,SO:0001217,UniParc:UPI00000DEFBE,UniRef:UniRef100_E2QDP6,UniRef:UniRef50_P15034,UniRef:UniRef90_P15034;ec_number=3.4.11.9
contig_1	Pyrodigal	gene	2966161	2966739	.	-	.	ID=GCA000010485_02895_gene;locus_tag=GCA000010485_02895;gene=ygfB
contig_1	Pyrodigal	CDS	2966161	2966739	.	-	0	ID=GCA000010485_02895;Name=UPF0149 family protein YgfB;locus_tag=GCA000010485_02895;product=UPF0149 family protein YgfB;Dbxref=GO:0005829;gene=ygfB;Parent=GCA000010485_02895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295378,COG:COG3079,COG:S,KEGG:K09895,RefSeq:WP_001295378.1,SO:0001217,UniParc:UPI000013B075,UniRef:UniRef100_P0A8C4,UniRef:UniRef50_P0A8C4,UniRef:UniRef90_P0A8C4
contig_1	Pyrodigal	gene	2966907	2967236	.	+	.	ID=GCA000010485_02896_gene;locus_tag=GCA000010485_02896;gene=zapA
contig_1	Pyrodigal	CDS	2966907	2967236	.	+	0	ID=GCA000010485_02896;Name=cell division protein ZapA;locus_tag=GCA000010485_02896;product=cell division protein ZapA;Dbxref=GO:0000917,GO:0000921,GO:0005829,GO:0005886,GO:0030428,GO:0032153,GO:0043093;gene=zapA;Parent=GCA000010485_02896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001276008.1,SO:0001217,UniParc:UPI000013B079,UniRef:UniRef100_Q1JQN5,UniRef:UniRef50_A1JPP1,UniRef:UniRef90_Q1JQN5
contig_1	Infernal	gene	2967278	2967461	.	+	.	ID=GCA000010485_02897_gene;locus_tag=GCA000010485_02897;gene=6S
contig_1	Infernal	ncRNA	2967278	2967461	1.1e-25	+	.	ID=GCA000010485_02897;Name=6S / SsrS RNA;locus_tag=GCA000010485_02897;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA000010485_02897_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013
contig_1	Pyrodigal	gene	2967482	2968084	.	+	.	ID=GCA000010485_02898_gene;locus_tag=GCA000010485_02898;gene=ygfA
contig_1	Pyrodigal	CDS	2967482	2968084	.	+	0	ID=GCA000010485_02898;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000010485_02898;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0005524,GO:0005737,GO:0009396,GO:0022611,GO:0030272,GO:0035999;gene=ygfA;Parent=GCA000010485_02898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,RefSeq:WP_000192747.1,SO:0001217,UniParc:UPI0001E8C212,UniRef:UniRef100_A0A066SVJ1,UniRef:UniRef50_P0AC28,UniRef:UniRef90_P0AC28;ec_number=6.3.3.2
contig_1	Infernal	gene	2968110	2968260	.	+	.	ID=GCA000010485_02899_gene;locus_tag=GCA000010485_02899;gene=SIB_RNA
contig_1	Infernal	ncRNA	2968110	2968260	1.1e-21	+	.	ID=GCA000010485_02899;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_02899;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_02899_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	2968185	2968244	.	-	.	ID=GCA000010485_02900_gene;locus_tag=GCA000010485_02900;inference=ab initio prediction:Bakta;gene=ibsC
contig_1	Bakta	CDS	2968185	2968244	.	-	0	ID=GCA000010485_02900;Name=Small toxic protein IbsC;locus_tag=GCA000010485_02900;product=Small toxic protein IbsC;Dbxref=GO:0012501;gene=ibsC;Parent=GCA000010485_02900_gene;Note=RefSeq:WP_010723220.1,SO:0001217,UniParc:UPI000199A54F,UniRef:UniRef100_C1P615,UniRef:UniRef50_C1P615,UniRef:UniRef90_C1P615
contig_1	Pyrodigal	gene	2968473	2969705	.	-	.	ID=GCA000010485_02901_gene;locus_tag=GCA000010485_02901;gene=serA
contig_1	Pyrodigal	CDS	2968473	2969705	.	-	0	ID=GCA000010485_02901;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000010485_02901;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0005829,GO:0006564,GO:0016616,GO:0051287;gene=serA;Parent=GCA000010485_02901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,RefSeq:WP_001151604.1,SO:0001217,UniParc:UPI000002D3AC,UniRef:UniRef100_P0A9T0,UniRef:UniRef50_P0A9T0,UniRef:UniRef90_P0A9T0;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	2969961	2970620	.	-	.	ID=GCA000010485_02902_gene;locus_tag=GCA000010485_02902;gene=rpiA
contig_1	Pyrodigal	CDS	2969961	2970620	.	-	0	ID=GCA000010485_02902;Name=ribose-5-phosphate isomerase RpiA;locus_tag=GCA000010485_02902;product=ribose-5-phosphate isomerase RpiA;Dbxref=GO:0004751,GO:0005829,GO:0006014,GO:0009052;gene=rpiA;Parent=GCA000010485_02902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,KEGG:K01807,RefSeq:WP_000189743.1,SO:0001217,UniParc:UPI0000134637,UniRef:UniRef100_A1AFA2,UniRef:UniRef50_P44725,UniRef:UniRef90_P66692;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	2970676	2970906	.	-	.	ID=GCA000010485_02903_gene;locus_tag=GCA000010485_02903;gene=yqfE
contig_1	Pyrodigal	CDS	2970676	2970906	.	-	0	ID=GCA000010485_02903;Name=Putative protein YqfE;locus_tag=GCA000010485_02903;product=Putative protein YqfE;gene=yqfE;Parent=GCA000010485_02903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000545308.1,SO:0001217,UniParc:UPI000013BEFA,UniRef:UniRef100_P64563,UniRef:UniRef50_P64563,UniRef:UniRef90_P64563
contig_1	Pyrodigal	gene	2971047	2971940	.	+	.	ID=GCA000010485_02904_gene;locus_tag=GCA000010485_02904;gene=argP
contig_1	Pyrodigal	CDS	2971047	2971940	.	+	0	ID=GCA000010485_02904;Name=DNA-binding transcriptional regulator ArgP;locus_tag=GCA000010485_02904;product=DNA-binding transcriptional regulator ArgP;Dbxref=GO:0003677,GO:0003700;gene=argP;Parent=GCA000010485_02904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000828351,COG:COG0583,COG:K,RefSeq:WP_000828351.1,SO:0001217,UniParc:UPI000012D164,UniRef:UniRef100_P0A8S1,UniRef:UniRef50_P0A8S1,UniRef:UniRef90_P0A8S1
contig_1	Pyrodigal	gene	2972143	2973198	.	+	.	ID=GCA000010485_02905_gene;locus_tag=GCA000010485_02905
contig_1	Pyrodigal	CDS	2972143	2973198	.	+	0	ID=GCA000010485_02905;Name=Putative methylmalonyl-CoA mutase;locus_tag=GCA000010485_02905;product=Putative methylmalonyl-CoA mutase;Parent=GCA000010485_02905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000073273.1,SO:0001217,UniParc:UPI0001C22C60,UniRef:UniRef100_A0A1U9TTK0,UniRef:UniRef50_A0A3S4NQV2,UniRef:UniRef90_A0A376D1Y7
contig_1	Pyrodigal	gene	2973195	2973506	.	-	.	ID=GCA000010485_02906_gene;locus_tag=GCA000010485_02906;gene=srsR
contig_1	Pyrodigal	CDS	2973195	2973506	.	-	0	ID=GCA000010485_02906;Name=LysR family transcriptional regulator SrsR;locus_tag=GCA000010485_02906;product=LysR family transcriptional regulator SrsR;Dbxref=GO:0003700;gene=srsR;Parent=GCA000010485_02906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2A8A,UniRef:UniRef100_A0A066QKW7,UniRef:UniRef50_P52044,UniRef:UniRef90_A0A066QKW7
contig_1	Pyrodigal	gene	2973513	2973806	.	-	.	ID=GCA000010485_02907_gene;locus_tag=GCA000010485_02907;gene=lysR
contig_1	Pyrodigal	CDS	2973513	2973806	.	-	0	ID=GCA000010485_02907;Name=LysR family transcriptional regulator;locus_tag=GCA000010485_02907;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000010485_02907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22C61,UniRef:UniRef100_A0A192CC03,UniRef:UniRef50_A0A8S0FME1,UniRef:UniRef90_A0A8S0FME1
contig_1	Pyrodigal	gene	2973816	2974091	.	-	.	ID=GCA000010485_02908_gene;locus_tag=GCA000010485_02908;gene=srsR
contig_1	Pyrodigal	CDS	2973816	2974091	.	-	0	ID=GCA000010485_02908;Name=LysR family transcriptional regulator SrsR;locus_tag=GCA000010485_02908;product=LysR family transcriptional regulator SrsR;Dbxref=GO:0003700;gene=srsR;Parent=GCA000010485_02908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000350790.1,SO:0001217,UniParc:UPI0001C22C62,UniRef:UniRef100_A0A066QKW7,UniRef:UniRef50_P52044,UniRef:UniRef90_A0A066QKW7
contig_1	Pyrodigal	gene	2974259	2974999	.	-	.	ID=GCA000010485_02909_gene;locus_tag=GCA000010485_02909;gene=yggE
contig_1	Pyrodigal	CDS	2974259	2974999	.	-	0	ID=GCA000010485_02909;Name=oxidative stress defense protein;locus_tag=GCA000010485_02909;product=oxidative stress defense protein;Dbxref=GO:0006974;gene=yggE;Parent=GCA000010485_02909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2968,COG:S,KEGG:K09807,RefSeq:WP_000669838.1,SO:0001217,UniParc:UPI0001C22C63,UniRef:UniRef100_A0A061KYU0,UniRef:UniRef50_P0ADS6,UniRef:UniRef90_P0ADS6
contig_1	Pyrodigal	gene	2975092	2975727	.	-	.	ID=GCA000010485_02910_gene;locus_tag=GCA000010485_02910;gene=argO
contig_1	Pyrodigal	CDS	2975092	2975727	.	-	0	ID=GCA000010485_02910;Name=arginine exporter ArgO;locus_tag=GCA000010485_02910;product=arginine exporter ArgO;Dbxref=GO:0005886,GO:0016020,GO:0061459,GO:1903826;gene=argO;Parent=GCA000010485_02910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1279,COG:E,RefSeq:WP_000493346.1,SO:0001217,UniParc:UPI00000DEFC3,UniRef:UniRef100_Q8FE55,UniRef:UniRef50_P11667,UniRef:UniRef90_P11667
contig_1	Pyrodigal	gene	2975866	2976726	.	-	.	ID=GCA000010485_02911_gene;locus_tag=GCA000010485_02911;gene=mscS
contig_1	Pyrodigal	CDS	2975866	2976726	.	-	0	ID=GCA000010485_02911;Name=small-conductance mechanosensitive channel MscS;locus_tag=GCA000010485_02911;product=small-conductance mechanosensitive channel MscS;Dbxref=GO:0005886,GO:0008381;gene=mscS;Parent=GCA000010485_02911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000389818,COG:COG0668,COG:M,RefSeq:WP_000389811.1,SO:0001217,UniParc:UPI00000DEFC4,UniRef:UniRef100_E2QDQ8,UniRef:UniRef50_P0C0S1,UniRef:UniRef90_P0C0S1
contig_1	Pyrodigal	gene	2976917	2977996	.	-	.	ID=GCA000010485_02912_gene;locus_tag=GCA000010485_02912;gene=fbaA
contig_1	Pyrodigal	CDS	2976917	2977996	.	-	0	ID=GCA000010485_02912;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000010485_02912;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0005829,GO:0005975,GO:0006094,GO:0006096,GO:0008270,GO:0042802,GO:0042803;gene=fbaA;Parent=GCA000010485_02912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_000034372.1,SO:0001217,UniParc:UPI00000380F1,UniRef:UniRef100_P0AB71,UniRef:UniRef50_P0AB71,UniRef:UniRef90_P0AB71;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2978210	2979373	.	-	.	ID=GCA000010485_02913_gene;locus_tag=GCA000010485_02913;gene=pgk
contig_1	Pyrodigal	CDS	2978210	2979373	.	-	0	ID=GCA000010485_02913;Name=phosphoglycerate kinase;locus_tag=GCA000010485_02913;product=phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531,GO:0097216;gene=pgk;Parent=GCA000010485_02913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000111274,COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_000111269.1,SO:0001217,UniParc:UPI0000168176,UniRef:UniRef100_P0A799,UniRef:UniRef50_P0A799,UniRef:UniRef90_P0A799;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	2979423	2980442	.	-	.	ID=GCA000010485_02914_gene;locus_tag=GCA000010485_02914;gene=epd
contig_1	Pyrodigal	CDS	2979423	2980442	.	-	0	ID=GCA000010485_02914;Name=erythrose-4-phosphate dehydrogenase;locus_tag=GCA000010485_02914;product=erythrose-4-phosphate dehydrogenase;Dbxref=GO:0005737,GO:0008615,GO:0042823,GO:0048001,GO:0051287;gene=epd;Parent=GCA000010485_02914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03472,RefSeq:WP_000218480.1,SO:0001217,UniParc:UPI00001654E4,UniRef:UniRef100_P0A9B6,UniRef:UniRef50_P0A9B6,UniRef:UniRef90_P0A9B6;ec_number=1.2.1.72
contig_1	Pyrodigal	gene	2980814	2981245	.	+	.	ID=GCA000010485_02915_gene;locus_tag=GCA000010485_02915;gene=aF0104
contig_1	Pyrodigal	CDS	2980814	2981245	.	+	0	ID=GCA000010485_02915;Name=PPC domain-containing protein;locus_tag=GCA000010485_02915;product=PPC domain-containing protein;gene=aF0104;Parent=GCA000010485_02915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1661,COG:R,RefSeq:WP_000988707.1,SO:0001217,UniParc:UPI0000D50C20,UniRef:UniRef100_E2QDR2,UniRef:UniRef50_A8APE2,UniRef:UniRef90_A0AAJ3NXD9
contig_1	Pyrodigal	gene	2981268	2981846	.	+	.	ID=GCA000010485_02916_gene;locus_tag=GCA000010485_02916
contig_1	Pyrodigal	CDS	2981268	2981846	.	+	0	ID=GCA000010485_02916;Name=ECF transporter S component;locus_tag=GCA000010485_02916;product=ECF transporter S component;Parent=GCA000010485_02916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16923,RefSeq:WP_000113902.1,SO:0001217,UniParc:UPI0001C22C64,UniRef:UniRef100_A0A061L444,UniRef:UniRef50_A8APE3,UniRef:UniRef90_Q32BY9
contig_1	Pyrodigal	gene	2981847	2982554	.	+	.	ID=GCA000010485_02917_gene;locus_tag=GCA000010485_02917;gene=ecfT
contig_1	Pyrodigal	CDS	2981847	2982554	.	+	0	ID=GCA000010485_02917;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000010485_02917;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000010485_02917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,RefSeq:WP_000553238.1,SO:0001217,UniParc:UPI0001C22C65,UniRef:UniRef100_A0A061L1G3,UniRef:UniRef50_A8APE4,UniRef:UniRef90_Q32BZ0
contig_1	Pyrodigal	gene	2982542	2983219	.	+	.	ID=GCA000010485_02918_gene;locus_tag=GCA000010485_02918
contig_1	Pyrodigal	CDS	2982542	2983219	.	+	0	ID=GCA000010485_02918;Name=ABC transporter ATP-binding protein;locus_tag=GCA000010485_02918;product=ABC transporter ATP-binding protein;Parent=GCA000010485_02918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012896840.1,SO:0001217,UniParc:UPI0001C22C66,UniRef:UniRef100_UPI0001C22C66,UniRef:UniRef50_A8APE5,UniRef:UniRef90_A0A376HL79
contig_1	Pyrodigal	gene	2983213	2983890	.	+	.	ID=GCA000010485_02919_gene;locus_tag=GCA000010485_02919;gene=cysA
contig_1	Pyrodigal	CDS	2983213	2983890	.	+	0	ID=GCA000010485_02919;Name=ABC transporter ATP-binding protein;locus_tag=GCA000010485_02919;product=ABC transporter ATP-binding protein;gene=cysA;Parent=GCA000010485_02919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1118,COG:P,RefSeq:WP_000956881.1,SO:0001217,UniParc:UPI0001C22C67,UniRef:UniRef100_A0A061KYT0,UniRef:UniRef50_A8APE6,UniRef:UniRef90_A0A658YXQ9
contig_1	Pyrodigal	gene	2983862	2984575	.	-	.	ID=GCA000010485_02920_gene;locus_tag=GCA000010485_02920;gene=coaA
contig_1	Pyrodigal	CDS	2983862	2984575	.	-	0	ID=GCA000010485_02920;Name=nucleoside/nucleotide kinase family protein;locus_tag=GCA000010485_02920;product=nucleoside/nucleotide kinase family protein;gene=coaA;Parent=GCA000010485_02920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1072,COG:H,KEGG:K02173,RefSeq:WP_000687745.1,SO:0001217,UniParc:UPI0000D50C24,UniRef:UniRef100_A0A061L3C1,UniRef:UniRef50_P11664,UniRef:UniRef90_A0A0E1IRD5
contig_1	Pyrodigal	gene	2984572	2985081	.	-	.	ID=GCA000010485_02921_gene;locus_tag=GCA000010485_02921;gene=fumE
contig_1	Pyrodigal	CDS	2984572	2985081	.	-	0	ID=GCA000010485_02921;Name=fumarase E;locus_tag=GCA000010485_02921;product=fumarase E;Dbxref=GO:0004333;gene=fumE;Parent=GCA000010485_02921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000224147,COG:COG3722,COG:K,KEGG:K01774,RefSeq:WP_000224168.1,SO:0001217,UniParc:UPI0001C22C68,UniRef:UniRef100_A0A066T3X2,UniRef:UniRef50_P11663,UniRef:UniRef90_P11663;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	2985103	2986068	.	-	.	ID=GCA000010485_02922_gene;locus_tag=GCA000010485_02922;gene=glpX
contig_1	Pyrodigal	CDS	2985103	2986068	.	-	0	ID=GCA000010485_02922;Name=class II fructose-bisphosphatase;locus_tag=GCA000010485_02922;product=class II fructose-bisphosphatase;Dbxref=GO:0006071,GO:0006094,GO:0030145,GO:0030388,GO:0042132;gene=glpX;Parent=GCA000010485_02922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000987277.1,SO:0001217,UniParc:UPI000018FA09,UniRef:UniRef100_Q7UBP3,UniRef:UniRef50_P21437,UniRef:UniRef90_P21437;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	2986065	2987342	.	-	.	ID=GCA000010485_02923_gene;locus_tag=GCA000010485_02923;gene=yggP
contig_1	Pyrodigal	CDS	2986065	2987342	.	-	0	ID=GCA000010485_02923;Name=putative protein YggP;locus_tag=GCA000010485_02923;product=putative protein YggP;Dbxref=GO:0016491;gene=yggP;Parent=GCA000010485_02923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K19956,RefSeq:WP_000853238.1,SO:0001217,UniParc:UPI0001C22C69,UniRef:UniRef100_A0A066SW02,UniRef:UniRef50_Q5E1G4,UniRef:UniRef90_P52048;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2987357	2988745	.	-	.	ID=GCA000010485_02924_gene;locus_tag=GCA000010485_02924;gene=cmtA
contig_1	Pyrodigal	CDS	2987357	2988745	.	-	0	ID=GCA000010485_02924;Name=PTS mannitol transporter subunit IICB;locus_tag=GCA000010485_02924;product=PTS mannitol transporter subunit IICB;Dbxref=GO:0005886,GO:0009401,GO:0016301,GO:0022872;gene=cmtA;Parent=GCA000010485_02924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000428805,COG:COG2213,COG:G,KEGG:K02800,RefSeq:WP_000428787.1,SO:0001217,UniParc:UPI0001C22C6A,UniRef:UniRef100_A0A2D3Q2B9,UniRef:UniRef50_P69826,UniRef:UniRef90_P69826;ec_number=2.7.1.197
contig_1	Pyrodigal	gene	2988773	2989216	.	-	.	ID=GCA000010485_02925_gene;locus_tag=GCA000010485_02925;gene=cmtB
contig_1	Pyrodigal	CDS	2988773	2989216	.	-	0	ID=GCA000010485_02925;Name=PTS mannitol transporter subunit IIA;locus_tag=GCA000010485_02925;product=PTS mannitol transporter subunit IIA;gene=cmtB;Parent=GCA000010485_02925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001236698.1,SO:0001217,UniParc:UPI0001C22C6B,UniRef:UniRef100_A0A061YM16,UniRef:UniRef50_P69824,UniRef:UniRef90_A0A2B7M4U1;ec_number=2.7.1.197
contig_1	Pyrodigal	gene	2989594	2990502	.	+	.	ID=GCA000010485_02926_gene;locus_tag=GCA000010485_02926
contig_1	Pyrodigal	CDS	2989594	2990502	.	+	0	ID=GCA000010485_02926;Name=Prohibitin family protein;locus_tag=GCA000010485_02926;product=Prohibitin family protein;Parent=GCA000010485_02926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000646924.1,SO:0001217,UniParc:UPI0001C22C6D,UniRef:UniRef100_A0A061YNU2,UniRef:UniRef50_A0A564ICV8,UniRef:UniRef90_A0A0D8W0B0
contig_1	Pyrodigal	gene	2990710	2992701	.	-	.	ID=GCA000010485_02927_gene;locus_tag=GCA000010485_02927;gene=tkt
contig_1	Pyrodigal	CDS	2990710	2992701	.	-	0	ID=GCA000010485_02927;Name=transketolase;locus_tag=GCA000010485_02927;product=transketolase;Dbxref=GO:0000287,GO:0004802,GO:0005829,GO:0006098,GO:0009052,GO:0030145,GO:0030976,GO:0042803;gene=tkt;Parent=GCA000010485_02927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_000098615.1,SO:0001217,UniParc:UPI0001C22C6E,UniRef:UniRef100_A0A061YFR5,UniRef:UniRef50_P27302,UniRef:UniRef90_P27302;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	2992979	2993737	.	+	.	ID=GCA000010485_02928_gene;locus_tag=GCA000010485_02928;gene=loiP
contig_1	Pyrodigal	CDS	2992979	2993737	.	+	0	ID=GCA000010485_02928;Name=metalloprotease LoiP;locus_tag=GCA000010485_02928;product=metalloprotease LoiP;gene=loiP;Parent=GCA000010485_02928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001326497,COG:COG0501,COG:O,KEGG:K07387,RefSeq:WP_001546095.1,SO:0001217,UniParc:UPI0001C22C6F,UniRef:UniRef100_A0A641BJC9,UniRef:UniRef50_P25894,UniRef:UniRef90_A0A5P2MGP8;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	2994167	2995087	.	-	.	ID=GCA000010485_02929_gene;locus_tag=GCA000010485_02929;gene=speB
contig_1	Pyrodigal	CDS	2994167	2995087	.	-	0	ID=GCA000010485_02929;Name=agmatinase;locus_tag=GCA000010485_02929;product=agmatinase;Dbxref=GO:0008295,GO:0008783,GO:0030145,GO:0033389;gene=speB;Parent=GCA000010485_02929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,RefSeq:WP_000105562.1,SO:0001217,UniParc:UPI00000DEFD6,UniRef:UniRef100_B7UHY3,UniRef:UniRef50_P60651,UniRef:UniRef90_P60651;ec_number=3.5.3.11
contig_1	Pyrodigal	gene	2995223	2995954	.	-	.	ID=GCA000010485_02930_gene;locus_tag=GCA000010485_02930
contig_1	Pyrodigal	CDS	2995223	2995954	.	-	0	ID=GCA000010485_02930;Name=Lipoprotein;locus_tag=GCA000010485_02930;product=Lipoprotein;Parent=GCA000010485_02930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000758881.1,SO:0001217,UniParc:UPI0001C22C70,UniRef:UniRef100_A0A061L3B1,UniRef:UniRef50_A0A085P042,UniRef:UniRef90_A0A085P042
contig_1	Pyrodigal	gene	2996100	2998076	.	-	.	ID=GCA000010485_02931_gene;locus_tag=GCA000010485_02931;gene=speA
contig_1	Pyrodigal	CDS	2996100	2998076	.	-	0	ID=GCA000010485_02931;Name=biosynthetic arginine decarboxylase;locus_tag=GCA000010485_02931;product=biosynthetic arginine decarboxylase;Dbxref=GO:0006527,GO:0008295,GO:0008792,GO:0033388,GO:0046872;gene=speA;Parent=GCA000010485_02931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1166,COG:E,RefSeq:WP_001295380.1,SO:0001217,UniParc:UPI00000D040C,UniRef:UniRef100_Q8XCX9,UniRef:UniRef50_P21170,UniRef:UniRef90_P21170;ec_number=4.1.1.19
contig_1	Pyrodigal	gene	2998871	3000025	.	+	.	ID=GCA000010485_02932_gene;locus_tag=GCA000010485_02932;gene=metK
contig_1	Pyrodigal	CDS	2998871	3000025	.	+	0	ID=GCA000010485_02932;Name=methionine adenosyltransferase;locus_tag=GCA000010485_02932;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000010485_02932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_001062128.1,SO:0001217,UniParc:UPI0000032E71,UniRef:UniRef100_P0A817,UniRef:UniRef50_P0A817,UniRef:UniRef90_P0A817;ec_number=2.5.1.6
contig_1	Pyrodigal	gene	3000462	3001856	.	+	.	ID=GCA000010485_02933_gene;locus_tag=GCA000010485_02933;gene=galP
contig_1	Pyrodigal	CDS	3000462	3001856	.	+	0	ID=GCA000010485_02933;Name=galactose/proton symporter;locus_tag=GCA000010485_02933;product=galactose/proton symporter;Dbxref=GO:0005886,GO:0015293,GO:0015517,GO:0015757,GO:0016020,GO:0055085;gene=galP;Parent=GCA000010485_02933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001112301,COG:COG2814,COG:G,RefSeq:WP_001112301.1,SO:0001217,UniParc:UPI00000371B7,UniRef:UniRef100_P0AEP1,UniRef:UniRef50_P0AE24,UniRef:UniRef90_P0AEP1
contig_1	Pyrodigal	gene	3001975	3002430	.	+	.	ID=GCA000010485_02934_gene;locus_tag=GCA000010485_02934;gene=sprT
contig_1	Pyrodigal	CDS	3001975	3002430	.	+	0	ID=GCA000010485_02934;Name=SprT family zinc-dependent metalloprotease;locus_tag=GCA000010485_02934;product=SprT family zinc-dependent metalloprotease;Dbxref=GO:0005737,GO:0008270,GO:0033554;gene=sprT;Parent=GCA000010485_02934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,SO:0001217,UniParc:UPI00019F49ED,UniRef:UniRef100_B7UHZ1,UniRef:UniRef50_P39902,UniRef:UniRef90_P39902
contig_1	Pyrodigal	gene	3002525	3003232	.	+	.	ID=GCA000010485_02935_gene;locus_tag=GCA000010485_02935;gene=endA
contig_1	Pyrodigal	CDS	3002525	3003232	.	+	0	ID=GCA000010485_02935;Name=deoxyribonuclease I;locus_tag=GCA000010485_02935;product=deoxyribonuclease I;Dbxref=GO:0004518,GO:0004519,GO:0004530,GO:0006308,GO:0016888,GO:0042597;gene=endA;Parent=GCA000010485_02935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2356,COG:L,KEGG:K01150,RefSeq:WP_001305312.1,SO:0001217,UniParc:UPI0000E45166,UniRef:UniRef100_A0A0D6H217,UniRef:UniRef50_P25736,UniRef:UniRef90_P25736;ec_number=3.1.21.1
contig_1	Pyrodigal	gene	3003312	3004043	.	+	.	ID=GCA000010485_02936_gene;locus_tag=GCA000010485_02936;gene=rsmE
contig_1	Pyrodigal	CDS	3003312	3004043	.	+	0	ID=GCA000010485_02936;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000010485_02936;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070042,GO:0070475;gene=rsmE;Parent=GCA000010485_02936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_001531929.1,SO:0001217,UniParc:UPI0001C22C95,UniRef:UniRef100_A0A641E2Q1,UniRef:UniRef50_P0AGL7,UniRef:UniRef90_P0AGL7;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	3004056	3005006	.	+	.	ID=GCA000010485_02937_gene;locus_tag=GCA000010485_02937;gene=gshB
contig_1	Pyrodigal	CDS	3004056	3005006	.	+	0	ID=GCA000010485_02937;Name=glutathione synthase;locus_tag=GCA000010485_02937;product=glutathione synthase;Dbxref=GO:0004363,GO:0005524,GO:0005737,GO:0006750,GO:0046872;gene=gshB;Parent=GCA000010485_02937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0189,COG:EHJQ,KEGG:K01920,RefSeq:WP_000593260.1,SO:0001217,UniParc:UPI0000673BDD,UniRef:UniRef100_B7UHZ4,UniRef:UniRef50_P04425,UniRef:UniRef90_P04425;ec_number=6.3.2.3
contig_1	Pyrodigal	gene	3005043	3005678	.	+	.	ID=GCA000010485_02938_gene;locus_tag=GCA000010485_02938;gene=yqgE
contig_1	Pyrodigal	CDS	3005043	3005678	.	+	0	ID=GCA000010485_02938;Name=YqgE/AlgH family protein;locus_tag=GCA000010485_02938;product=YqgE/AlgH family protein;Dbxref=GO:0005829;gene=yqgE;Parent=GCA000010485_02938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1678,COG:K,RefSeq:WP_000126441.1,SO:0001217,UniParc:UPI00000D041B,UniRef:UniRef100_P0A8W5,UniRef:UniRef50_P0A8W5,UniRef:UniRef90_P0A8W5
contig_1	Pyrodigal	gene	3005678	3006094	.	+	.	ID=GCA000010485_02939_gene;locus_tag=GCA000010485_02939;gene=ruvX
contig_1	Pyrodigal	CDS	3005678	3006094	.	+	0	ID=GCA000010485_02939;Name=Holliday junction resolvase RuvX;locus_tag=GCA000010485_02939;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005737,GO:0006364;gene=ruvX;Parent=GCA000010485_02939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_000017106.1,SO:0001217,UniParc:UPI000003419A,UniRef:UniRef100_P0A8I1,UniRef:UniRef50_P0A8I1,UniRef:UniRef90_P0A8I1;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	3006268	3007248	.	-	.	ID=GCA000010485_02940_gene;locus_tag=GCA000010485_02940;gene=yggR
contig_1	Pyrodigal	CDS	3006268	3007248	.	-	0	ID=GCA000010485_02940;Name=putative protein YggR;locus_tag=GCA000010485_02940;product=putative protein YggR;Dbxref=GO:0005524,GO:0005829,GO:0016887;gene=yggR;Parent=GCA000010485_02940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2805,COG:NU,RefSeq:WP_001525611.1,SO:0001217,UniParc:UPI0001C22C96,UniRef:UniRef100_A0A6D0HCQ9,UniRef:UniRef50_P52052,UniRef:UniRef90_P52052
contig_1	Pyrodigal	gene	3007266	3007970	.	+	.	ID=GCA000010485_02941_gene;locus_tag=GCA000010485_02941;gene=yggS
contig_1	Pyrodigal	CDS	3007266	3007970	.	+	0	ID=GCA000010485_02941;Name=pyridoxal phosphate homeostasis protein;locus_tag=GCA000010485_02941;product=pyridoxal phosphate homeostasis protein;Dbxref=GO:0005829,GO:0030170;gene=yggS;Parent=GCA000010485_02941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000997795,COG:COG0325,COG:H,RefSeq:WP_000997805.1,SO:0001217,UniParc:UPI000191E872,UniRef:UniRef100_A0A1X9VBA0,UniRef:UniRef50_P67080,UniRef:UniRef90_P67080
contig_1	Pyrodigal	gene	3007988	3008554	.	+	.	ID=GCA000010485_02942_gene;locus_tag=GCA000010485_02942;gene=yggT
contig_1	Pyrodigal	CDS	3007988	3008554	.	+	0	ID=GCA000010485_02942;Name=osmotic shock tolerance protein YggT;locus_tag=GCA000010485_02942;product=osmotic shock tolerance protein YggT;Dbxref=GO:0005886,GO:0071474;gene=yggT;Parent=GCA000010485_02942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001094831,COG:COG0762,COG:O,RefSeq:WP_001094831.1,SO:0001217,UniParc:UPI000013B09E,UniRef:UniRef100_P64564,UniRef:UniRef50_P64564,UniRef:UniRef90_P64564
contig_1	Pyrodigal	gene	3008551	3008841	.	+	.	ID=GCA000010485_02943_gene;locus_tag=GCA000010485_02943;gene=yggU
contig_1	Pyrodigal	CDS	3008551	3008841	.	+	0	ID=GCA000010485_02943;Name=DUF167 domain-containing protein;locus_tag=GCA000010485_02943;product=DUF167 domain-containing protein;Dbxref=GO:0005737;gene=yggU;Parent=GCA000010485_02943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09131,RefSeq:WP_001277214.1,SO:0001217,UniParc:UPI0001C22C97,UniRef:UniRef100_A0A2S5UII7,UniRef:UniRef50_P52060,UniRef:UniRef90_Q8XCU6
contig_1	Pyrodigal	gene	3008849	3009442	.	+	.	ID=GCA000010485_02944_gene;locus_tag=GCA000010485_02944;gene=rdgB
contig_1	Pyrodigal	CDS	3008849	3009442	.	+	0	ID=GCA000010485_02944;Name=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;locus_tag=GCA000010485_02944;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;Dbxref=GO:0000166,GO:0005829,GO:0006281,GO:0009117,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872;gene=rdgB;Parent=GCA000010485_02944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,KEGG:K01519,RefSeq:WP_001174738.1,SO:0001217,UniParc:UPI00000DEFDE,UniRef:UniRef100_Q8FE27,UniRef:UniRef50_P52061,UniRef:UniRef90_P52061;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	3009435	3010571	.	+	.	ID=GCA000010485_02945_gene;locus_tag=GCA000010485_02945;gene=hemW
contig_1	Pyrodigal	CDS	3009435	3010571	.	+	0	ID=GCA000010485_02945;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000010485_02945;product=radical SAM family heme chaperone HemW;Dbxref=GO:0004109,GO:0005737,GO:0006779,GO:0020037,GO:0042803,GO:0046872,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000010485_02945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,RefSeq:WP_000239982.1,SO:0001217,UniParc:UPI0001C22C98,UniRef:UniRef100_UPI0001C22C98,UniRef:UniRef50_P52062,UniRef:UniRef90_P52062
contig_1	Pyrodigal	gene	3010886	3011872	.	+	.	ID=GCA000010485_02946_gene;locus_tag=GCA000010485_02946
contig_1	Pyrodigal	CDS	3010886	3011872	.	+	0	ID=GCA000010485_02946;Name=C4-dicarboxylate-binding periplasmic protein;locus_tag=GCA000010485_02946;product=C4-dicarboxylate-binding periplasmic protein;Parent=GCA000010485_02946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784009.1,SO:0001217,UniParc:UPI0003913E3B,UniRef:UniRef100_A0A4C4L9T8,UniRef:UniRef50_A0A023KNT7,UniRef:UniRef90_A0A023KNT7
contig_1	Pyrodigal	gene	3011917	3012420	.	+	.	ID=GCA000010485_02947_gene;locus_tag=GCA000010485_02947
contig_1	Pyrodigal	CDS	3011917	3012420	.	+	0	ID=GCA000010485_02947;Name=TRAP transporter small permease protein;locus_tag=GCA000010485_02947;product=TRAP transporter small permease protein;Parent=GCA000010485_02947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000577028.1,SO:0001217,UniParc:UPI000302FAFF,UniRef:UniRef100_A0A0K6ADS7,UniRef:UniRef50_A0A332L6U2,UniRef:UniRef90_A0A9P2J055
contig_1	Pyrodigal	gene	3012420	3013721	.	+	.	ID=GCA000010485_02948_gene;locus_tag=GCA000010485_02948;gene=dctQ
contig_1	Pyrodigal	CDS	3012420	3013721	.	+	0	ID=GCA000010485_02948;Name=TRAP transporter large permease protein;locus_tag=GCA000010485_02948;product=TRAP transporter large permease protein;gene=dctQ;Parent=GCA000010485_02948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1593,COG:G,RefSeq:WP_000378965.1,SO:0001217,UniParc:UPI0001C22C9B,UniRef:UniRef100_UPI0001C22C9B,UniRef:UniRef50_P40800,UniRef:UniRef90_A0A381CCF5
contig_1	Pyrodigal	gene	3013777	3014784	.	-	.	ID=GCA000010485_02949_gene;locus_tag=GCA000010485_02949;gene=yggM
contig_1	Pyrodigal	CDS	3013777	3014784	.	-	0	ID=GCA000010485_02949;Name=putative protein YggM;locus_tag=GCA000010485_02949;product=putative protein YggM;gene=yggM;Parent=GCA000010485_02949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000745233.1,SO:0001217,UniParc:UPI0001C22C9C,UniRef:UniRef100_UPI0001C22C9C,UniRef:UniRef50_P46142,UniRef:UniRef90_P46142
contig_1	Pyrodigal	gene	3014901	3015947	.	-	.	ID=GCA000010485_02950_gene;locus_tag=GCA000010485_02950;gene=ansB
contig_1	Pyrodigal	CDS	3014901	3015947	.	-	0	ID=GCA000010485_02950;Name=L-asparaginase 2;locus_tag=GCA000010485_02950;product=L-asparaginase 2;Dbxref=GO:0004067,GO:0006528,GO:0006530,GO:0030288,GO:0032991,GO:0042597,GO:0042802,GO:0051289;gene=ansB;Parent=GCA000010485_02950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_000394107.1,SO:0001217,UniParc:UPI00005E3637,UniRef:UniRef100_C0KWF5,UniRef:UniRef50_P00805,UniRef:UniRef90_P00805;ec_number=3.5.1.1
contig_1	Pyrodigal	gene	3016123	3016842	.	-	.	ID=GCA000010485_02951_gene;locus_tag=GCA000010485_02951;gene=yggN
contig_1	Pyrodigal	CDS	3016123	3016842	.	-	0	ID=GCA000010485_02951;Name=putative protein YggN;locus_tag=GCA000010485_02951;product=putative protein YggN;Dbxref=GO:0044010;gene=yggN;Parent=GCA000010485_02951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000984796.1,SO:0001217,UniParc:UPI0000000D1B,UniRef:UniRef100_P0ADS9,UniRef:UniRef50_P0ADS9,UniRef:UniRef90_P0ADS9
contig_1	Pyrodigal	gene	3017026	3017352	.	-	.	ID=GCA000010485_02952_gene;locus_tag=GCA000010485_02952;gene=yggL
contig_1	Pyrodigal	CDS	3017026	3017352	.	-	0	ID=GCA000010485_02952;Name=DUF469 domain-containing protein;locus_tag=GCA000010485_02952;product=DUF469 domain-containing protein;gene=yggL;Parent=GCA000010485_02952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3171,COG:S,RefSeq:WP_001107565.1,SO:0001217,UniParc:UPI00005EF7AC,UniRef:UniRef100_A0A0D8VQJ7,UniRef:UniRef50_P38521,UniRef:UniRef90_L0M208
contig_1	Pyrodigal	gene	3017352	3018071	.	-	.	ID=GCA000010485_02953_gene;locus_tag=GCA000010485_02953;gene=trmB
contig_1	Pyrodigal	CDS	3017352	3018071	.	-	0	ID=GCA000010485_02953;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000010485_02953;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176;gene=trmB;Parent=GCA000010485_02953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000786925.1,SO:0001217,UniParc:UPI0001C22C9D,UniRef:UniRef100_A0A3L1KR89,UniRef:UniRef50_Q8ZHE9,UniRef:UniRef90_A0A3L1KR89;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	3018232	3019284	.	+	.	ID=GCA000010485_02954_gene;locus_tag=GCA000010485_02954;gene=mutY
contig_1	Pyrodigal	CDS	3018232	3019284	.	+	0	ID=GCA000010485_02954;Name=A/G-specific adenine glycosylase;locus_tag=GCA000010485_02954;product=A/G-specific adenine glycosylase;Dbxref=GO:0006281,GO:0019104;gene=mutY;Parent=GCA000010485_02954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,RefSeq:WP_001338011.1,SO:0001217,UniParc:UPI000187BFF4,UniRef:UniRef100_A0A2Y8VLI9,UniRef:UniRef50_P17802,UniRef:UniRef90_Q32C30;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	3019312	3019587	.	+	.	ID=GCA000010485_02955_gene;locus_tag=GCA000010485_02955;gene=yggX
contig_1	Pyrodigal	CDS	3019312	3019587	.	+	0	ID=GCA000010485_02955;Name=oxidative damage protection protein;locus_tag=GCA000010485_02955;product=oxidative damage protection protein;Dbxref=GO:0005506,GO:0005829,GO:0034599;gene=yggX;Parent=GCA000010485_02955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2924,COG:PO,RefSeq:WP_000091700.1,SO:0001217,UniParc:UPI0000163A04,UniRef:UniRef100_P0A8P3,UniRef:UniRef50_P0A8P3,UniRef:UniRef90_P0A8P3
contig_1	Pyrodigal	gene	3019652	3020731	.	+	.	ID=GCA000010485_02956_gene;locus_tag=GCA000010485_02956;gene=mltC
contig_1	Pyrodigal	CDS	3019652	3020731	.	+	0	ID=GCA000010485_02956;Name=membrane-bound lytic murein transglycosylase MltC;locus_tag=GCA000010485_02956;product=membrane-bound lytic murein transglycosylase MltC;Dbxref=GO:0000270,GO:0008933,GO:0009279,GO:0016020,GO:0016798,GO:0016998,GO:0071555;gene=mltC;Parent=GCA000010485_02956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,KEGG:K08306,RefSeq:WP_000760323.1,SO:0001217,UniParc:UPI000012F232,UniRef:UniRef100_P0C066,UniRef:UniRef50_P0C066,UniRef:UniRef90_P0C066;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	3020933	3022189	.	+	.	ID=GCA000010485_02957_gene;locus_tag=GCA000010485_02957;gene=nupG
contig_1	Pyrodigal	CDS	3020933	3022189	.	+	0	ID=GCA000010485_02957;Name=nucleoside permease NupG;locus_tag=GCA000010485_02957;product=nucleoside permease NupG;Dbxref=GO:0005886,GO:0015212,GO:0015213,GO:0015506;gene=nupG;Parent=GCA000010485_02957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001049791,KEGG:K03289,RefSeq:WP_001296363.1,SO:0001217,UniParc:UPI00019F4A51,UniRef:UniRef100_A0A066SVP2,UniRef:UniRef50_P0AFF4,UniRef:UniRef90_P0AFF4
contig_1	Pyrodigal	gene	3022238	3024373	.	-	.	ID=GCA000010485_02958_gene;locus_tag=GCA000010485_02958;gene=speC
contig_1	Pyrodigal	CDS	3022238	3024373	.	-	0	ID=GCA000010485_02958;Name=ornithine decarboxylase;locus_tag=GCA000010485_02958;product=ornithine decarboxylase;gene=speC;Parent=GCA000010485_02958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001326492,COG:COG1982,COG:E,RefSeq:WP_012896845.1,SO:0001217,UniParc:UPI0001C22C9E,UniRef:UniRef100_A0A4C4L891,UniRef:UniRef50_A0A085GJP7,UniRef:UniRef90_B8ZYD1;ec_number=4.1.1.17
contig_1	Bakta	gene	3024536	3024619	.	-	.	ID=GCA000010485_02959_gene;locus_tag=GCA000010485_02959;inference=ab initio prediction:Bakta;gene=yqgH
contig_1	Bakta	CDS	3024536	3024619	.	-	0	ID=GCA000010485_02959;Name=Protein YqgH;locus_tag=GCA000010485_02959;product=Protein YqgH;gene=yqgH;Parent=GCA000010485_02959_gene;Note=RefSeq:WP_212734243.1,SO:0001217,UniParc:UPI001BAFE568,UniRef:UniRef100_A0A3R0SK50,UniRef:UniRef50_P0DSG3,UniRef:UniRef90_P0DSG3
contig_1	Pyrodigal	gene	3024772	3025479	.	+	.	ID=GCA000010485_02960_gene;locus_tag=GCA000010485_02960;gene=yqgA
contig_1	Pyrodigal	CDS	3024772	3025479	.	+	0	ID=GCA000010485_02960;Name=putative protein YqgA;locus_tag=GCA000010485_02960;product=putative protein YqgA;Dbxref=GO:0005886;gene=yqgA;Parent=GCA000010485_02960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07150,RefSeq:WP_000234491.1,SO:0001217,UniParc:UPI00000DEFEA,UniRef:UniRef100_A0A0D8W0U5,UniRef:UniRef50_Q46831,UniRef:UniRef90_Q46831
contig_1	tRNAscan-SE	gene	3025585	3025660	.	+	.	ID=GCA000010485_02961_gene;locus_tag=GCA000010485_02961;gene=trnF
contig_1	tRNAscan-SE	tRNA	3025585	3025660	.	+	.	ID=GCA000010485_02961;Name=tRNA-Phe(gaa);locus_tag=GCA000010485_02961;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000010485_02961_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	Pyrodigal	gene	3025765	3026055	.	-	.	ID=GCA000010485_02962_gene;locus_tag=GCA000010485_02962
contig_1	Pyrodigal	CDS	3025765	3026055	.	-	0	ID=GCA000010485_02962;Name=Ybl126;locus_tag=GCA000010485_02962;product=Ybl126;Parent=GCA000010485_02962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q707E7,UniRef:UniRef90_Q707E7
contig_1	Pyrodigal	gene	3026851	3027834	.	+	.	ID=GCA000010485_02963_gene;locus_tag=GCA000010485_02963;gene=kpsF
contig_1	Pyrodigal	CDS	3026851	3027834	.	+	0	ID=GCA000010485_02963;Name=Polysialic acid capsule expression protein;locus_tag=GCA000010485_02963;product=Polysialic acid capsule expression protein;Dbxref=GO:0005524,GO:0009103,GO:0019146,GO:0046872;gene=kpsF;Parent=GCA000010485_02963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298261.1,SO:0001217,UniParc:UPI00016A1136,UniRef:UniRef100_A0A1U9TLB1,UniRef:UniRef50_Q8FDQ2,UniRef:UniRef90_Q8FDQ2,VFDB:VFC0083,VFDB:VFG050157;ec_number=5.3.1.13
contig_1	Pyrodigal	gene	3027906	3029054	.	+	.	ID=GCA000010485_02964_gene;locus_tag=GCA000010485_02964;gene=kpsE
contig_1	Pyrodigal	CDS	3027906	3029054	.	+	0	ID=GCA000010485_02964;Name=Capsule polysaccharide export inner-membrane protein;locus_tag=GCA000010485_02964;product=Capsule polysaccharide export inner-membrane protein;Dbxref=GO:0004713,GO:0005351,GO:0005886,GO:0009276,GO:0015774;gene=kpsE;Parent=GCA000010485_02964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10107,RefSeq:WP_000905920.1,SO:0001217,UniParc:UPI000012E08D,UniRef:UniRef100_P62586,UniRef:UniRef50_P42501,UniRef:UniRef90_P42501,VFDB:VFC0083,VFDB:VFG050158
contig_1	Pyrodigal	gene	3029078	3030754	.	+	.	ID=GCA000010485_02965_gene;locus_tag=GCA000010485_02965;gene=kpsD
contig_1	Pyrodigal	CDS	3029078	3030754	.	+	0	ID=GCA000010485_02965;Name=Polysialic acid transport protein precursor;locus_tag=GCA000010485_02965;product=Polysialic acid transport protein precursor;Dbxref=GO:0015159,GO:0042597;gene=kpsD;Parent=GCA000010485_02965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001605878.1,SO:0001217,UniParc:UPI0001C22CA0,UniRef:UniRef100_UPI0001C22CA0,UniRef:UniRef50_Q03961,UniRef:UniRef90_Q03961,VFDB:VFC0083,VFDB:VFG050159
contig_1	Pyrodigal	gene	3030764	3031504	.	+	.	ID=GCA000010485_02966_gene;locus_tag=GCA000010485_02966;gene=kpsU
contig_1	Pyrodigal	CDS	3030764	3031504	.	+	0	ID=GCA000010485_02966;Name=3-deoxy-manno-octulosonate cytidylyltransferase;locus_tag=GCA000010485_02966;product=3-deoxy-manno-octulosonate cytidylyltransferase;Dbxref=GO:0005829,GO:0008690,GO:0009103,GO:0009244,GO:0033468;gene=kpsU;Parent=GCA000010485_02966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00979,RefSeq:WP_000030761.1,SO:0001217,UniParc:UPI000191E8B9,UniRef:UniRef100_A0A148HWS4,UniRef:UniRef50_P42216,UniRef:UniRef90_P42216,VFDB:VFC0083,VFDB:VFG050160;ec_number=2.7.7.38
contig_1	Pyrodigal	gene	3031501	3033528	.	+	.	ID=GCA000010485_02967_gene;locus_tag=GCA000010485_02967;gene=kpsC
contig_1	Pyrodigal	CDS	3031501	3033528	.	+	0	ID=GCA000010485_02967;Name=Capsule polysaccharide export protein;locus_tag=GCA000010485_02967;product=Capsule polysaccharide export protein;Dbxref=GO:0000271,GO:0005737,GO:0015774;gene=kpsC;Parent=GCA000010485_02967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07266,RefSeq:WP_000579520.1,SO:0001217,UniParc:UPI0001C22CA1,UniRef:UniRef100_UPI0001C22CA1,UniRef:UniRef50_P42217,UniRef:UniRef90_P42217,VFDB:VFC0083,VFDB:VFG050161
contig_1	Pyrodigal	gene	3033563	3034744	.	+	.	ID=GCA000010485_02968_gene;locus_tag=GCA000010485_02968;gene=kpsS
contig_1	Pyrodigal	CDS	3033563	3034744	.	+	0	ID=GCA000010485_02968;Name=Capsule polysaccharide export protein;locus_tag=GCA000010485_02968;product=Capsule polysaccharide export protein;Dbxref=GO:0000271,GO:0015774;gene=kpsS;Parent=GCA000010485_02968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001161830.1,SO:0001217,UniParc:UPI0001C22CA2,UniRef:UniRef100_UPI0001C22CA2,UniRef:UniRef50_P42218,UniRef:UniRef90_P42218,VFDB:VFC0083,VFDB:VFG050162
contig_1	Pyrodigal	gene	3035043	3036710	.	-	.	ID=GCA000010485_02969_gene;locus_tag=GCA000010485_02969
contig_1	Pyrodigal	CDS	3035043	3036710	.	-	0	ID=GCA000010485_02969;Name=glycosyltransferase;locus_tag=GCA000010485_02969;product=glycosyltransferase;Parent=GCA000010485_02969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000815689.1,SO:0001217,UniParc:UPI0001C22CA3,UniRef:UniRef100_UPI0001C22CA3,UniRef:UniRef50_UPI0010C319F4,UniRef:UniRef90_UPI0011CA077B
contig_1	Pyrodigal	gene	3037336	3038481	.	-	.	ID=GCA000010485_02970_gene;locus_tag=GCA000010485_02970
contig_1	Pyrodigal	CDS	3037336	3038481	.	-	0	ID=GCA000010485_02970;Name=M48 family metallopeptidase;locus_tag=GCA000010485_02970;product=M48 family metallopeptidase;Parent=GCA000010485_02970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000611947.1,SO:0001217,UniParc:UPI00031BEC88,UniRef:UniRef100_UPI00031BEC88,UniRef:UniRef50_UPI00031BEC88,UniRef:UniRef90_UPI00031BEC88
contig_1	Pyrodigal	gene	3039091	3041181	.	-	.	ID=GCA000010485_02971_gene;locus_tag=GCA000010485_02971
contig_1	Pyrodigal	CDS	3039091	3041181	.	-	0	ID=GCA000010485_02971;Name=capsular biosynthesis protein;locus_tag=GCA000010485_02971;product=capsular biosynthesis protein;Parent=GCA000010485_02971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001246930.1,SO:0001217,UniParc:UPI0002F8DD24,UniRef:UniRef100_UPI0010CC024A,UniRef:UniRef50_UPI0025A68489,UniRef:UniRef90_UPI0010CC024A
contig_1	Pyrodigal	gene	3041200	3042309	.	-	.	ID=GCA000010485_02972_gene;locus_tag=GCA000010485_02972
contig_1	Pyrodigal	CDS	3041200	3042309	.	-	0	ID=GCA000010485_02972;Name=CDP-glycerol glycerophosphotransferase family protein;locus_tag=GCA000010485_02972;product=CDP-glycerol glycerophosphotransferase family protein;Parent=GCA000010485_02972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000227440.1,SO:0001217,UniParc:UPI0001C22CCD,UniRef:UniRef100_UPI0015FC9B22,UniRef:UniRef50_A0A1B7JPV6,UniRef:UniRef90_UPI0002A3017A
contig_1	Pyrodigal	gene	3042302	3042697	.	-	.	ID=GCA000010485_02973_gene;locus_tag=GCA000010485_02973
contig_1	Pyrodigal	CDS	3042302	3042697	.	-	0	ID=GCA000010485_02973;Name=Glycerol-3-phosphate cytidylyltransferase;locus_tag=GCA000010485_02973;product=Glycerol-3-phosphate cytidylyltransferase;Parent=GCA000010485_02973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001261185.1,SO:0001217,UniParc:UPI0001C22CCE,UniRef:UniRef100_UPI0001C22CCE,UniRef:UniRef50_Q5M6N5,UniRef:UniRef90_A0A0H3EPE4
contig_1	Pyrodigal	gene	3042867	3043541	.	-	.	ID=GCA000010485_02974_gene;locus_tag=GCA000010485_02974;gene=kpsT
contig_1	Pyrodigal	CDS	3042867	3043541	.	-	0	ID=GCA000010485_02974;Name=Polysialic acid transport ATP-binding protein KpsT;locus_tag=GCA000010485_02974;product=Polysialic acid transport ATP-binding protein KpsT;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0140359;gene=kpsT;Parent=GCA000010485_02974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000590249.1,SO:0001217,UniParc:UPI0001C22CCF,UniRef:UniRef100_UPI0001C22CCF,UniRef:UniRef50_P24586,UniRef:UniRef90_P24586
contig_1	Pyrodigal	gene	3043538	3044314	.	-	.	ID=GCA000010485_02975_gene;locus_tag=GCA000010485_02975;gene=kpsM
contig_1	Pyrodigal	CDS	3043538	3044314	.	-	0	ID=GCA000010485_02975;Name=Polysialic acid transport protein;locus_tag=GCA000010485_02975;product=Polysialic acid transport protein;Dbxref=GO:0015920,GO:0043190,GO:0140359;gene=kpsM;Parent=GCA000010485_02975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09688,RefSeq:WP_000124283.1,SO:0001217,UniParc:UPI0001C22CD0,UniRef:UniRef100_UPI0001C22CD0,UniRef:UniRef50_P23889,UniRef:UniRef90_P23889,VFDB:VFC0083,VFDB:VFG050169
contig_1	Infernal	regulatory_region	3044343	3044381	3e-12	-	.	ID=EFPPCJGBKI_315;Name=JUMPstart RNA;product=JUMPstart RNA;Dbxref=RFAM:RF01707;inference=profile:Rfam:RF01707;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	3045487	3046023	.	-	.	ID=GCA000010485_02976_gene;locus_tag=GCA000010485_02976;gene=yghD
contig_1	Pyrodigal	CDS	3045487	3046023	.	-	0	ID=GCA000010485_02976;Name=GspM family type II secretion system protein YghD;locus_tag=GCA000010485_02976;product=GspM family type II secretion system protein YghD;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=yghD;Parent=GCA000010485_02976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000942805.1,SO:0001217,UniParc:UPI0001C22CD1,UniRef:UniRef100_UPI0001C22CD1,UniRef:UniRef50_Q46832,UniRef:UniRef90_Q46832
contig_1	Pyrodigal	gene	3046025	3047203	.	-	.	ID=GCA000010485_02977_gene;locus_tag=GCA000010485_02977;gene=gspL
contig_1	Pyrodigal	CDS	3046025	3047203	.	-	0	ID=GCA000010485_02977;Name=general secretion pathway protein L;locus_tag=GCA000010485_02977;product=general secretion pathway protein L;Dbxref=GO:0009276,GO:0015627,GO:0015628;gene=gspL;Parent=GCA000010485_02977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3297,COG:U,KEGG:K02461,RefSeq:WP_000097211.1,SO:0001217,UniParc:UPI0001C22CD2,UniRef:UniRef100_A0A2U9LEK7,UniRef:UniRef50_Q8VPC1,UniRef:UniRef90_Q8VPC1,VFDB:VFC0086,VFDB:VFG002055
contig_1	Pyrodigal	gene	3047200	3048177	.	-	.	ID=GCA000010485_02978_gene;locus_tag=GCA000010485_02978;gene=gspK
contig_1	Pyrodigal	CDS	3047200	3048177	.	-	0	ID=GCA000010485_02978;Name=general secretion pathway protein K;locus_tag=GCA000010485_02978;product=general secretion pathway protein K;Dbxref=GO:0009306,GO:0016020;gene=gspK;Parent=GCA000010485_02978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3156,COG:U,RefSeq:WP_000631648.1,SO:0001217,UniParc:UPI0001C22CD3,UniRef:UniRef100_A0A0K5NPL8,UniRef:UniRef50_A0A2X1PQB2,UniRef:UniRef90_A0A2X1PQB2,VFDB:VFC0086,VFDB:VFG002054
contig_1	Pyrodigal	gene	3048174	3048779	.	-	.	ID=GCA000010485_02979_gene;locus_tag=GCA000010485_02979;gene=gspJ
contig_1	Pyrodigal	CDS	3048174	3048779	.	-	0	ID=GCA000010485_02979;Name=general secretion pathway protein J;locus_tag=GCA000010485_02979;product=general secretion pathway protein J;Dbxref=GO:0015627,GO:0015628;gene=gspJ;Parent=GCA000010485_02979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4795,COG:U,RefSeq:WP_024210483.1,SO:0001217,UniParc:UPI0003EF8F74,UniRef:UniRef100_UPI0003EF8F74,UniRef:UniRef50_A0A4C3GMC1,UniRef:UniRef90_A0A0J3VNV5,VFDB:VFC0086,VFDB:VFG002053
contig_1	Pyrodigal	gene	3048776	3049147	.	-	.	ID=GCA000010485_02980_gene;locus_tag=GCA000010485_02980;gene=gspI
contig_1	Pyrodigal	CDS	3048776	3049147	.	-	0	ID=GCA000010485_02980;Name=general secretion pathway protein I;locus_tag=GCA000010485_02980;product=general secretion pathway protein I;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspI;Parent=GCA000010485_02980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000820073.1,SO:0001217,UniParc:UPI00016A1395,UniRef:UniRef100_A0A376HS12,UniRef:UniRef50_Q8VPC3,UniRef:UniRef90_Q8VPC3,VFDB:VFC0086,VFDB:VFG002052
contig_1	Pyrodigal	gene	3049144	3049707	.	-	.	ID=GCA000010485_02981_gene;locus_tag=GCA000010485_02981;gene=gspH
contig_1	Pyrodigal	CDS	3049144	3049707	.	-	0	ID=GCA000010485_02981;Name=general secretion pathway protein H;locus_tag=GCA000010485_02981;product=general secretion pathway protein H;Dbxref=GO:0015627,GO:0015628;gene=gspH;Parent=GCA000010485_02981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,KEGG:K02457,RefSeq:WP_001115120.1,SO:0001217,UniParc:UPI00016A1396,UniRef:UniRef100_A0A376HSL2,UniRef:UniRef50_Q32C42,UniRef:UniRef90_Q32C42,VFDB:VFC0086,VFDB:VFG002051
contig_1	Pyrodigal	gene	3049711	3050166	.	-	.	ID=GCA000010485_02982_gene;locus_tag=GCA000010485_02982;gene=gspG
contig_1	Pyrodigal	CDS	3049711	3050166	.	-	0	ID=GCA000010485_02982;Name=general secretion pathway protein G;locus_tag=GCA000010485_02982;product=general secretion pathway protein G;Dbxref=GO:0015627,GO:0015628;gene=gspG;Parent=GCA000010485_02982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,RefSeq:WP_001087296.1,SO:0001217,UniParc:UPI00000B6F51,UniRef:UniRef100_A0A1X0PFU2,UniRef:UniRef50_P45773,UniRef:UniRef90_Q32C43,VFDB:VFC0086,VFDB:VFG002050
contig_1	Pyrodigal	gene	3050183	3051406	.	-	.	ID=GCA000010485_02983_gene;locus_tag=GCA000010485_02983;gene=gspF
contig_1	Pyrodigal	CDS	3050183	3051406	.	-	0	ID=GCA000010485_02983;Name=general secretion pathway protein F;locus_tag=GCA000010485_02983;product=general secretion pathway protein F;Dbxref=GO:0015627,GO:0015628;gene=gspF;Parent=GCA000010485_02983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1459,COG:NU,RefSeq:WP_001173404.1,SO:0001217,UniParc:UPI0001C22CD6,UniRef:UniRef100_UPI0001C22CD6,UniRef:UniRef50_A0A061K2I4,UniRef:UniRef90_A0A1V2SYL4,VFDB:VFC0086,VFDB:VFG002049
contig_1	Pyrodigal	gene	3051406	3052899	.	-	.	ID=GCA000010485_02984_gene;locus_tag=GCA000010485_02984;gene=gspE
contig_1	Pyrodigal	CDS	3051406	3052899	.	-	0	ID=GCA000010485_02984;Name=general secretion pathway protein E;locus_tag=GCA000010485_02984;product=general secretion pathway protein E;Dbxref=GO:0005524,GO:0015627,GO:0015628;gene=gspE;Parent=GCA000010485_02984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2804,COG:NU,RefSeq:WP_000249339.1,SO:0001217,UniParc:UPI0001C22CD7,UniRef:UniRef100_A0A1X9VC92,UniRef:UniRef50_Q00512,UniRef:UniRef90_Q707C2,VFDB:VFC0086,VFDB:VFG002048
contig_1	Pyrodigal	gene	3052899	3054959	.	-	.	ID=GCA000010485_02985_gene;locus_tag=GCA000010485_02985;gene=gspD
contig_1	Pyrodigal	CDS	3052899	3054959	.	-	0	ID=GCA000010485_02985;Name=general secretion pathway protein D;locus_tag=GCA000010485_02985;product=general secretion pathway protein D;Dbxref=GO:0009279,GO:0015627,GO:0015628,GO:0019867;gene=gspD;Parent=GCA000010485_02985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1450,COG:NU,RefSeq:WP_000498844.1,SO:0001217,UniParc:UPI000176AE31,UniRef:UniRef100_A0A0G9FLS2,UniRef:UniRef50_E3PJ86,UniRef:UniRef90_E3PJ86,VFDB:VFC0086,VFDB:VFG002047
contig_1	Pyrodigal	gene	3054989	3055948	.	-	.	ID=GCA000010485_02986_gene;locus_tag=GCA000010485_02986;gene=gspC
contig_1	Pyrodigal	CDS	3054989	3055948	.	-	0	ID=GCA000010485_02986;Name=general secretion pathway protein C;locus_tag=GCA000010485_02986;product=general secretion pathway protein C;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspC;Parent=GCA000010485_02986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000135060.1,SO:0001217,UniParc:UPI0003022795,UniRef:UniRef100_UPI0003022795,UniRef:UniRef50_E3PJ87,UniRef:UniRef90_E3PJ87,VFDB:VFC0086,VFDB:VFG002046
contig_1	Pyrodigal	gene	3055966	3056376	.	-	.	ID=GCA000010485_02987_gene;locus_tag=GCA000010485_02987;gene=yghG
contig_1	Pyrodigal	CDS	3055966	3056376	.	-	0	ID=GCA000010485_02987;Name=Lipoprotein YghG;locus_tag=GCA000010485_02987;product=Lipoprotein YghG;Dbxref=GO:0006974,GO:0009279;gene=yghG;Parent=GCA000010485_02987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298257.1,SO:0001217,UniParc:UPI000035E958,UniRef:UniRef100_Q707B9,UniRef:UniRef50_E3PJ88,UniRef:UniRef90_E3PJ88
contig_1	Pyrodigal	gene	3056442	3057251	.	-	.	ID=GCA000010485_02988_gene;locus_tag=GCA000010485_02988;gene=pppA
contig_1	Pyrodigal	CDS	3056442	3057251	.	-	0	ID=GCA000010485_02988;Name=prepilin peptidase PppA;locus_tag=GCA000010485_02988;product=prepilin peptidase PppA;Dbxref=GO:0004190,GO:0005886,GO:0006465,GO:0008168,GO:0032259;gene=pppA;Parent=GCA000010485_02988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001333829,RefSeq:WP_012896851.1,SO:0001217,UniParc:UPI0001C22CDA,UniRef:UniRef100_UPI0001C22CDA,UniRef:UniRef50_Q46836,UniRef:UniRef90_E3PJ89;ec_number=3.4.23.43
contig_1	Pyrodigal	gene	3057381	3061943	.	-	.	ID=GCA000010485_02989_gene;locus_tag=GCA000010485_02989;gene=sslE
contig_1	Pyrodigal	CDS	3057381	3061943	.	-	0	ID=GCA000010485_02989;Name=lipoprotein metalloprotease SslE;locus_tag=GCA000010485_02989;product=lipoprotein metalloprotease SslE;gene=sslE;Parent=GCA000010485_02989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10939,NCBIProtein:ADE89421.1,RefSeq:WP_001034450.1,SO:0001217,UniParc:UPI0001C22CDB,UniRef:UniRef100_UPI0001C22CDB,UniRef:UniRef50_E3PJ90,UniRef:UniRef90_A0A7A0H9C1
contig_1	Pyrodigal	gene	3062426	3064108	.	-	.	ID=GCA000010485_02990_gene;locus_tag=GCA000010485_02990;gene=glcA
contig_1	Pyrodigal	CDS	3062426	3064108	.	-	0	ID=GCA000010485_02990;Name=glycolate permease GlcA;locus_tag=GCA000010485_02990;product=glycolate permease GlcA;Dbxref=GO:0005886,GO:0015129,GO:0015295,GO:0035873,GO:0043879;gene=glcA;Parent=GCA000010485_02990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000259280.1,SO:0001217,UniParc:UPI00005EF781,UniRef:UniRef100_A0A0G9FLW9,UniRef:UniRef50_Q46839,UniRef:UniRef90_Q46839
contig_1	Infernal	gene	3064187	3064408	.	+	.	ID=GCA000010485_02991_gene;locus_tag=GCA000010485_02991;gene=C0719
contig_1	Infernal	ncRNA	3064187	3064408	9.3e-42	+	.	ID=GCA000010485_02991;Name=C0719 RNA;locus_tag=GCA000010485_02991;product=C0719 RNA;Dbxref=RFAM:RF00117;Parent=GCA000010485_02991_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00117
contig_1	Pyrodigal	gene	3064464	3066635	.	-	.	ID=GCA000010485_02992_gene;locus_tag=GCA000010485_02992;gene=glcB
contig_1	Pyrodigal	CDS	3064464	3066635	.	-	0	ID=GCA000010485_02992;Name=malate synthase G;locus_tag=GCA000010485_02992;product=malate synthase G;Dbxref=GO:0000287,GO:0004474,GO:0005829,GO:0006097,GO:0006099,GO:0009436;gene=glcB;Parent=GCA000010485_02992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000084098.1,SO:0001217,UniParc:UPI0001C22CDC,UniRef:UniRef100_UPI0001C22CDC,UniRef:UniRef50_P37330,UniRef:UniRef90_P37330;ec_number=2.3.3.9
contig_1	Pyrodigal	gene	3066657	3067061	.	-	.	ID=GCA000010485_02993_gene;locus_tag=GCA000010485_02993;gene=glcF
contig_1	Pyrodigal	CDS	3066657	3067061	.	-	0	ID=GCA000010485_02993;Name=glycolate oxidase subunit GlcF;locus_tag=GCA000010485_02993;product=glycolate oxidase subunit GlcF;Dbxref=GO:0051536;gene=glcF;Parent=GCA000010485_02993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11473,RefSeq:WP_000853256.1,SO:0001217,UniParc:UPI000012B566,UniRef:UniRef100_P0AEQ1,UniRef:UniRef50_P52074,UniRef:UniRef90_P0AEQ1;ec_number=1.1.99.14
contig_1	Pyrodigal	gene	3067066	3068289	.	-	.	ID=GCA000010485_02994_gene;locus_tag=GCA000010485_02994;gene=glcF
contig_1	Pyrodigal	CDS	3067066	3068289	.	-	0	ID=GCA000010485_02994;Name=glycolate oxidase subunit GlcF;locus_tag=GCA000010485_02994;product=glycolate oxidase subunit GlcF;Dbxref=GO:0005886,GO:0019154,GO:0046296,GO:0046872,GO:0047809,GO:0051536,GO:0051539;gene=glcF;Parent=GCA000010485_02994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11473,RefSeq:WP_001194814.1,SO:0001217,UniParc:UPI0001C22CDD,UniRef:UniRef100_UPI0001C22CDD,UniRef:UniRef50_P52074,UniRef:UniRef90_P52074;ec_number=1.1.99.14
contig_1	Pyrodigal	gene	3068300	3069352	.	-	.	ID=GCA000010485_02995_gene;locus_tag=GCA000010485_02995;gene=glcE
contig_1	Pyrodigal	CDS	3068300	3069352	.	-	0	ID=GCA000010485_02995;Name=glycolate oxidase subunit GlcE;locus_tag=GCA000010485_02995;product=glycolate oxidase subunit GlcE;Dbxref=GO:0005886,GO:0016491,GO:0019154,GO:0046296,GO:0047809,GO:0071949;gene=glcE;Parent=GCA000010485_02995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000943075.1,SO:0001217,UniParc:UPI00018865F5,UniRef:UniRef100_A0A1X9VCA0,UniRef:UniRef50_P52073,UniRef:UniRef90_P52073;ec_number=1.1.99.14
contig_1	Pyrodigal	gene	3069352	3070851	.	-	.	ID=GCA000010485_02996_gene;locus_tag=GCA000010485_02996;gene=glcD
contig_1	Pyrodigal	CDS	3069352	3070851	.	-	0	ID=GCA000010485_02996;Name=glycolate oxidase subunit GlcD;locus_tag=GCA000010485_02996;product=glycolate oxidase subunit GlcD;Dbxref=GO:0003973,GO:0005886,GO:0006974,GO:0009339,GO:0019154,GO:0046296,GO:0047809,GO:0071949;gene=glcD;Parent=GCA000010485_02996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00104,RefSeq:WP_000026146.1,SO:0001217,UniParc:UPI0001C22CDE,UniRef:UniRef100_UPI0001C22CDE,UniRef:UniRef50_P0AEP9,UniRef:UniRef90_P0AEP9;ec_number=1.1.99.14
contig_1	Pyrodigal	gene	3071102	3071866	.	+	.	ID=GCA000010485_02997_gene;locus_tag=GCA000010485_02997;gene=glcC
contig_1	Pyrodigal	CDS	3071102	3071866	.	+	0	ID=GCA000010485_02997;Name=transcriptional regulator GlcC;locus_tag=GCA000010485_02997;product=transcriptional regulator GlcC;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=glcC;Parent=GCA000010485_02997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11474,RefSeq:WP_001314155.1,SO:0001217,UniParc:UPI000187BDE8,UniRef:UniRef100_A0A0D8VN93,UniRef:UniRef50_P0ACL5,UniRef:UniRef90_P0ACL5
contig_1	Pyrodigal	gene	3071873	3073015	.	-	.	ID=GCA000010485_02998_gene;locus_tag=GCA000010485_02998;gene=yghO
contig_1	Pyrodigal	CDS	3071873	3073015	.	-	0	ID=GCA000010485_02998;Name=Protein YghO;locus_tag=GCA000010485_02998;product=Protein YghO;Dbxref=GO:0044010;gene=yghO;Parent=GCA000010485_02998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001312102.1,SO:0001217,UniParc:UPI0001C22CDF,UniRef:UniRef100_F4T2Y7,UniRef:UniRef50_Q46840,UniRef:UniRef90_Q46840
contig_1	Pyrodigal	gene	3073386	3075110	.	+	.	ID=GCA000010485_02999_gene;locus_tag=GCA000010485_02999
contig_1	Pyrodigal	CDS	3073386	3075110	.	+	0	ID=GCA000010485_02999;Name=fatty acyl-AMP ligase;locus_tag=GCA000010485_02999;product=fatty acyl-AMP ligase;Parent=GCA000010485_02999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531964.1,SO:0001217,UniParc:UPI0002A32D7E,UniRef:UniRef100_UPI0002A32D7E,UniRef:UniRef90_A0A379ZT01
contig_1	Pyrodigal	gene	3075107	3076021	.	+	.	ID=GCA000010485_03000_gene;locus_tag=GCA000010485_03000
contig_1	Pyrodigal	CDS	3075107	3076021	.	+	0	ID=GCA000010485_03000;Name=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2C octacis-undecaprenol 4-epimerase;locus_tag=GCA000010485_03000;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2C octacis-undecaprenol 4-epimerase;Parent=GCA000010485_03000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001077156.1,SO:0001217,UniParc:UPI0001C22CE1,UniRef:UniRef100_A0A6D0HA51,UniRef:UniRef50_A0A1E2X6G4,UniRef:UniRef90_A0A1E2X6G4
contig_1	Pyrodigal	gene	3076053	3076301	.	+	.	ID=GCA000010485_03001_gene;locus_tag=GCA000010485_03001
contig_1	Pyrodigal	CDS	3076053	3076301	.	+	0	ID=GCA000010485_03001;Name=Acyl carrier protein;locus_tag=GCA000010485_03001;product=Acyl carrier protein;Parent=GCA000010485_03001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248097.1,SO:0001217,UniParc:UPI000000E5D1,UniRef:UniRef100_J7Q9M4,UniRef:UniRef50_A0A071LT00,UniRef:UniRef90_J7Q9M4
contig_1	Pyrodigal	gene	3076301	3077473	.	+	.	ID=GCA000010485_03002_gene;locus_tag=GCA000010485_03002;gene=spt
contig_1	Pyrodigal	CDS	3076301	3077473	.	+	0	ID=GCA000010485_03002;Name=serine palmitoyltransferase;locus_tag=GCA000010485_03002;product=serine palmitoyltransferase;Dbxref=GO:0004758,GO:0030170,GO:0046513;gene=spt;Parent=GCA000010485_03002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000524961.1,SO:0001217,UniParc:UPI0001C22CE2,UniRef:UniRef100_A0A4C4L676,UniRef:UniRef50_A0A0H3C7E9,UniRef:UniRef90_W8SUF5;ec_number=2.3.1.50
contig_1	Pyrodigal	gene	3077508	3078587	.	-	.	ID=GCA000010485_03003_gene;locus_tag=GCA000010485_03003;gene=lptG
contig_1	Pyrodigal	CDS	3077508	3078587	.	-	0	ID=GCA000010485_03003;Name=LPS export ABC transporter permease LptG;locus_tag=GCA000010485_03003;product=LPS export ABC transporter permease LptG;Dbxref=GO:0015221,GO:0043190,GO:0055085;gene=lptG;Parent=GCA000010485_03003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001385484.1,SO:0001217,UniParc:UPI0001C22D0E,UniRef:UniRef100_A0A2U9LHF2,UniRef:UniRef50_A0A061K786,UniRef:UniRef90_A0A061K786;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	3078584	3079654	.	-	.	ID=GCA000010485_03004_gene;locus_tag=GCA000010485_03004;gene=lptF
contig_1	Pyrodigal	CDS	3078584	3079654	.	-	0	ID=GCA000010485_03004;Name=LPS export ABC transporter permease LptF;locus_tag=GCA000010485_03004;product=LPS export ABC transporter permease LptF;Dbxref=GO:0015221,GO:0043190,GO:0055085;gene=lptF;Parent=GCA000010485_03004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07091,RefSeq:WP_000779624.1,SO:0001217,UniParc:UPI0001C22D0F,UniRef:UniRef100_UPI0001C22D0F,UniRef:UniRef50_A0A066Q4T4,UniRef:UniRef90_A0AAN4F874;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	3079685	3080245	.	-	.	ID=GCA000010485_03005_gene;locus_tag=GCA000010485_03005
contig_1	Pyrodigal	CDS	3079685	3080245	.	-	0	ID=GCA000010485_03005;Name=Transcriptional regulator;locus_tag=GCA000010485_03005;product=Transcriptional regulator;Parent=GCA000010485_03005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07109,RefSeq:WP_001141144.1,SO:0001217,UniParc:UPI0001C22D10,UniRef:UniRef100_UPI0001C22D10,UniRef:UniRef50_A0A0U5LJI2,UniRef:UniRef90_J7R5J7
contig_1	Pyrodigal	gene	3080245	3081081	.	-	.	ID=GCA000010485_03006_gene;locus_tag=GCA000010485_03006
contig_1	Pyrodigal	CDS	3080245	3081081	.	-	0	ID=GCA000010485_03006;Name=Ybl138;locus_tag=GCA000010485_03006;product=Ybl138;Parent=GCA000010485_03006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000984958.1,SO:0001217,UniParc:UPI0001C22D11,UniRef:UniRef100_A0A2Y8PWT7,UniRef:UniRef50_A0A7L6LHN4,UniRef:UniRef90_A0A2X3LP69
contig_1	Pyrodigal	gene	3081081	3082430	.	-	.	ID=GCA000010485_03007_gene;locus_tag=GCA000010485_03007;gene=yghQ
contig_1	Pyrodigal	CDS	3081081	3082430	.	-	0	ID=GCA000010485_03007;Name=Inner membrane protein YghQ;locus_tag=GCA000010485_03007;product=Inner membrane protein YghQ;Dbxref=GO:0005886;gene=yghQ;Parent=GCA000010485_03007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000257923.1,SO:0001217,UniParc:UPI0001C22D12,UniRef:UniRef100_UPI0001C22D12,UniRef:UniRef50_Q46841,UniRef:UniRef90_Q46841
contig_1	Pyrodigal	gene	3082476	3083246	.	-	.	ID=GCA000010485_03008_gene;locus_tag=GCA000010485_03008;gene=yghR
contig_1	Pyrodigal	CDS	3082476	3083246	.	-	0	ID=GCA000010485_03008;Name=putative ATP-binding protein YghR;locus_tag=GCA000010485_03008;product=putative ATP-binding protein YghR;Dbxref=GO:0004798,GO:0005524,GO:0005737,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=yghR;Parent=GCA000010485_03008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000D50C56,UniRef:UniRef100_A0A1Y5BSP2,UniRef:UniRef50_P64572,UniRef:UniRef90_P64572
contig_1	Pyrodigal	gene	3083266	3083964	.	-	.	ID=GCA000010485_03009_gene;locus_tag=GCA000010485_03009;gene=yghS
contig_1	Pyrodigal	CDS	3083266	3083964	.	-	0	ID=GCA000010485_03009;Name=putative ATP-binding protein YghS;locus_tag=GCA000010485_03009;product=putative ATP-binding protein YghS;Dbxref=GO:0005524;gene=yghS;Parent=GCA000010485_03009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000191E427,UniRef:UniRef100_A0A2G8YNW5,UniRef:UniRef50_Q46843,UniRef:UniRef90_Q46843
contig_1	Pyrodigal	gene	3084154	3084846	.	+	.	ID=GCA000010485_03010_gene;locus_tag=GCA000010485_03010;gene=yghT
contig_1	Pyrodigal	CDS	3084154	3084846	.	+	0	ID=GCA000010485_03010;Name=putative ATP-binding protein YghT;locus_tag=GCA000010485_03010;product=putative ATP-binding protein YghT;Dbxref=GO:0004798,GO:0005524,GO:0005737,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=yghT;Parent=GCA000010485_03010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,RefSeq:WP_001190684.1,SO:0001217,UniParc:UPI0001C22D13,UniRef:UniRef100_A0A3K3CIK5,UniRef:UniRef50_Q46844,UniRef:UniRef90_Q46844
contig_1	Pyrodigal	gene	3084895	3086394	.	-	.	ID=GCA000010485_03011_gene;locus_tag=GCA000010485_03011;gene=pitB
contig_1	Pyrodigal	CDS	3084895	3086394	.	-	0	ID=GCA000010485_03011;Name=inorganic phosphate transporter PitB;locus_tag=GCA000010485_03011;product=inorganic phosphate transporter PitB;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015293,GO:0016020,GO:0035435;gene=pitB;Parent=GCA000010485_03011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000933250,COG:COG0306,COG:P,KEGG:K16322,RefSeq:WP_000933305.1,SO:0001217,UniParc:UPI0001C22D14,UniRef:UniRef100_UPI0001C22D14,UniRef:UniRef50_P0AFJ7,UniRef:UniRef90_P43676
contig_1	Pyrodigal	gene	3086685	3088544	.	-	.	ID=GCA000010485_03012_gene;locus_tag=GCA000010485_03012;gene=gss
contig_1	Pyrodigal	CDS	3086685	3088544	.	-	0	ID=GCA000010485_03012;Name=bifunctional glutathionylspermidine amidase/synthase;locus_tag=GCA000010485_03012;product=bifunctional glutathionylspermidine amidase/synthase;Dbxref=GO:0005524,GO:0006749,GO:0008216,GO:0008884,GO:0008885,GO:0046872;gene=gss;Parent=GCA000010485_03012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0754,COG:E,KEGG:K01460,RefSeq:WP_012896853.1,SO:0001217,UniParc:UPI0001C22D15,UniRef:UniRef100_UPI0001C22D15,UniRef:UniRef50_P0AES0,UniRef:UniRef90_P0AES0;ec_number=6.3.1.8
contig_1	Pyrodigal	gene	3088749	3089615	.	+	.	ID=GCA000010485_03013_gene;locus_tag=GCA000010485_03013;gene=yghU
contig_1	Pyrodigal	CDS	3088749	3089615	.	+	0	ID=GCA000010485_03013;Name=glutathione-dependent disulfide-bond oxidoreductase;locus_tag=GCA000010485_03013;product=glutathione-dependent disulfide-bond oxidoreductase;Dbxref=GO:0004364,GO:0004601,GO:0005515,GO:0005737,GO:0006749,GO:0015036,GO:0042803;gene=yghU;Parent=GCA000010485_03013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_001331683.1,SO:0001217,UniParc:UPI00018865FA,UniRef:UniRef100_A0A1X9VBK7,UniRef:UniRef50_Q46845,UniRef:UniRef90_Q46845;ec_number=1.8.4.-
contig_1	Infernal	gene	3089646	3089722	.	+	.	ID=GCA000010485_03014_gene;locus_tag=GCA000010485_03014;gene=naRNA4
contig_1	Infernal	ncRNA	3089646	3089722	7.3e-14	+	.	ID=GCA000010485_03014;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_03014;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_03014_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	3089738	3089986	.	-	.	ID=GCA000010485_03015_gene;locus_tag=GCA000010485_03015;gene=hybG
contig_1	Pyrodigal	CDS	3089738	3089986	.	-	0	ID=GCA000010485_03015;Name=hydrogenase maturation factor HybG;locus_tag=GCA000010485_03015;product=hydrogenase maturation factor HybG;Dbxref=GO:0005506,GO:0051604,GO:1902670;gene=hybG;Parent=GCA000010485_03015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000334896,COG:COG0298,COG:O,RefSeq:WP_000334896.1,SO:0001217,UniParc:UPI000012CFDD,UniRef:UniRef100_P0AAM7,UniRef:UniRef50_P0AAM7,UniRef:UniRef90_P0AAM7
contig_1	Pyrodigal	gene	3089999	3090340	.	-	.	ID=GCA000010485_03016_gene;locus_tag=GCA000010485_03016;gene=hypA
contig_1	Pyrodigal	CDS	3089999	3090340	.	-	0	ID=GCA000010485_03016;Name=hydrogenase maturation nickel metallochaperone HypA;locus_tag=GCA000010485_03016;product=hydrogenase maturation nickel metallochaperone HypA;Dbxref=GO:0008270,GO:0008901,GO:0016151,GO:0036211,GO:0051604;gene=hypA;Parent=GCA000010485_03016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0375,COG:O,RefSeq:WP_000544952.1,SO:0001217,UniParc:UPI00000DF070,UniRef:UniRef100_Q8FDM1,UniRef:UniRef50_P0A703,UniRef:UniRef90_P0A703
contig_1	Pyrodigal	gene	3090333	3090821	.	-	.	ID=GCA000010485_03017_gene;locus_tag=GCA000010485_03017;gene=hybE
contig_1	Pyrodigal	CDS	3090333	3090821	.	-	0	ID=GCA000010485_03017;Name=hydrogenase-2 assembly chaperone;locus_tag=GCA000010485_03017;product=hydrogenase-2 assembly chaperone;Dbxref=GO:0051604,GO:0070678;gene=hybE;Parent=GCA000010485_03017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000134010.1,SO:0001217,UniParc:UPI0001C22D16,UniRef:UniRef100_UPI0001C22D16,UniRef:UniRef50_P0AAN1,UniRef:UniRef90_P0AAN1
contig_1	Pyrodigal	gene	3090814	3091308	.	-	.	ID=GCA000010485_03018_gene;locus_tag=GCA000010485_03018;gene=hybD
contig_1	Pyrodigal	CDS	3090814	3091308	.	-	0	ID=GCA000010485_03018;Name=HyaD/HybD family hydrogenase maturation endopeptidase;locus_tag=GCA000010485_03018;product=HyaD/HybD family hydrogenase maturation endopeptidase;Dbxref=GO:0004175,GO:0004190,GO:0008047,GO:0016485,GO:0046872;gene=hybD;Parent=GCA000010485_03018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0680,KEGG:K03605,RefSeq:WP_001221939.1,SO:0001217,UniParc:UPI000012CFD6,UniRef:UniRef100_P37182,UniRef:UniRef50_P37182,UniRef:UniRef90_P37182;ec_number=3.4.23.-
contig_1	Pyrodigal	gene	3091308	3093011	.	-	.	ID=GCA000010485_03019_gene;locus_tag=GCA000010485_03019;gene=hybC
contig_1	Pyrodigal	CDS	3091308	3093011	.	-	0	ID=GCA000010485_03019;Name=hydrogenase 2 large subunit;locus_tag=GCA000010485_03019;product=hydrogenase 2 large subunit;Dbxref=GO:0005886,GO:0008901,GO:0016151,GO:0033748;gene=hybC;Parent=GCA000010485_03019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0374,RefSeq:WP_000083065.1,SO:0001217,UniParc:UPI0000163A07,UniRef:UniRef100_P0ACE0,UniRef:UniRef50_P0ACE0,UniRef:UniRef90_P0ACE0;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	3093008	3094186	.	-	.	ID=GCA000010485_03020_gene;locus_tag=GCA000010485_03020;gene=hybB
contig_1	Pyrodigal	CDS	3093008	3094186	.	-	0	ID=GCA000010485_03020;Name=Ni/Fe-hydrogenase cytochrome b subunit;locus_tag=GCA000010485_03020;product=Ni/Fe-hydrogenase cytochrome b subunit;Dbxref=GO:0005886,GO:0009061,GO:0019645,GO:0044569,GO:0046872;gene=hybB;Parent=GCA000010485_03020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5557,RefSeq:WP_000017694.1,SO:0001217,UniParc:UPI00000DF072,UniRef:UniRef100_E2QE12,UniRef:UniRef50_P37180,UniRef:UniRef90_P37180;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	3094176	3095162	.	-	.	ID=GCA000010485_03021_gene;locus_tag=GCA000010485_03021;gene=hybA
contig_1	Pyrodigal	CDS	3094176	3095162	.	-	0	ID=GCA000010485_03021;Name=hydrogenase 2 operon protein HybA;locus_tag=GCA000010485_03021;product=hydrogenase 2 operon protein HybA;Dbxref=GO:0016491,GO:0042597,GO:0046872,GO:0051539;gene=hybA;Parent=GCA000010485_03021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_001081868.1,SO:0001217,UniParc:UPI00000E4A69,UniRef:UniRef100_A0A2V2PBL0,UniRef:UniRef50_P0AAJ8,UniRef:UniRef90_P0AAJ8;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	3095165	3096283	.	-	.	ID=GCA000010485_03022_gene;locus_tag=GCA000010485_03022;gene=hybO
contig_1	Pyrodigal	CDS	3095165	3096283	.	-	0	ID=GCA000010485_03022;Name=hydrogenase 2 small subunit;locus_tag=GCA000010485_03022;product=hydrogenase 2 small subunit;Dbxref=GO:0005886,GO:0008901,GO:0009055,GO:0009061,GO:0009375,GO:0016020,GO:0033748,GO:0042597,GO:0044569,GO:0046872,GO:0051536,GO:0051538,GO:0051539;gene=hybO;Parent=GCA000010485_03022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1740,RefSeq:WP_000145410.1,SO:0001217,UniParc:UPI000012ED2F,UniRef:UniRef100_P69741,UniRef:UniRef50_P69741,UniRef:UniRef90_P69741;ec_number=1.12.99.6
contig_1	Pyrodigal	gene	3096472	3096759	.	-	.	ID=GCA000010485_03023_gene;locus_tag=GCA000010485_03023;gene=yghW
contig_1	Pyrodigal	CDS	3096472	3096759	.	-	0	ID=GCA000010485_03023;Name=putative protein YghW;locus_tag=GCA000010485_03023;product=putative protein YghW;Dbxref=GO:1901422;gene=yghW;Parent=GCA000010485_03023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001059136.1,SO:0001217,UniParc:UPI000013B0B4,UniRef:UniRef100_P64574,UniRef:UniRef50_P64574,UniRef:UniRef90_P64574
contig_1	Pyrodigal	gene	3096878	3097765	.	-	.	ID=GCA000010485_03024_gene;locus_tag=GCA000010485_03024;gene=yghX
contig_1	Pyrodigal	CDS	3096878	3097765	.	-	0	ID=GCA000010485_03024;Name=YghX family hydrolase;locus_tag=GCA000010485_03024;product=YghX family hydrolase;gene=yghX;Parent=GCA000010485_03024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531968.1,SO:0001217,UniParc:UPI0001C22D17,UniRef:UniRef100_UPI0001C22D17,UniRef:UniRef50_A0A1D3JX80,UniRef:UniRef90_A0A0K5UEA5;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	3097922	3098962	.	+	.	ID=GCA000010485_03025_gene;locus_tag=GCA000010485_03025;gene=gpr
contig_1	Pyrodigal	CDS	3097922	3098962	.	+	0	ID=GCA000010485_03025;Name=L-glyceraldehyde 3-phosphate reductase;locus_tag=GCA000010485_03025;product=L-glyceraldehyde 3-phosphate reductase;Dbxref=GO:0006974,GO:0016616,GO:0051596;gene=gpr;Parent=GCA000010485_03025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000262172,KEGG:K19265,RefSeq:WP_000262170.1,SO:0001217,UniParc:UPI00000DF074,UniRef:UniRef100_A0A0G9FME2,UniRef:UniRef50_Q46851,UniRef:UniRef90_Q46851;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3099002	3099496	.	-	.	ID=GCA000010485_03026_gene;locus_tag=GCA000010485_03026;gene=yqhA
contig_1	Pyrodigal	CDS	3099002	3099496	.	-	0	ID=GCA000010485_03026;Name=UPF0114 protein YqhA;locus_tag=GCA000010485_03026;product=UPF0114 protein YqhA;Dbxref=GO:0005886;gene=yqhA;Parent=GCA000010485_03026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2862,COG:S,RefSeq:WP_000439331.1,SO:0001217,UniParc:UPI000013BF0A,UniRef:UniRef100_P67244,UniRef:UniRef50_P67244,UniRef:UniRef90_P67244
contig_1	Pyrodigal	gene	3099687	3100571	.	+	.	ID=GCA000010485_03027_gene;locus_tag=GCA000010485_03027;gene=yghA
contig_1	Pyrodigal	CDS	3099687	3100571	.	+	0	ID=GCA000010485_03027;Name=NADP(+)-dependent aldehyde reductase;locus_tag=GCA000010485_03027;product=NADP(+)-dependent aldehyde reductase;gene=yghA;Parent=GCA000010485_03027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000018760,RefSeq:WP_001377063.1,SO:0001217,UniParc:UPI0001C22D18,UniRef:UniRef100_A0A246NYQ3,UniRef:UniRef50_E6LEU2,UniRef:UniRef90_A0A246NYQ3;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3100610	3101035	.	-	.	ID=GCA000010485_03028_gene;locus_tag=GCA000010485_03028;gene=exbD
contig_1	Pyrodigal	CDS	3100610	3101035	.	-	0	ID=GCA000010485_03028;Name=TonB system transport protein ExbD;locus_tag=GCA000010485_03028;product=TonB system transport protein ExbD;Dbxref=GO:0005886,GO:0015031,GO:0022857,GO:0043213,GO:0055085;gene=exbD;Parent=GCA000010485_03028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_001240712.1,SO:0001217,UniParc:UPI000012A344,UniRef:UniRef100_P0ABV2,UniRef:UniRef50_P0ABV2,UniRef:UniRef90_P0ABV2
contig_1	Pyrodigal	gene	3101042	3101776	.	-	.	ID=GCA000010485_03029_gene;locus_tag=GCA000010485_03029;gene=exbB
contig_1	Pyrodigal	CDS	3101042	3101776	.	-	0	ID=GCA000010485_03029;Name=tol-pal system-associated acyl-CoA thioesterase;locus_tag=GCA000010485_03029;product=tol-pal system-associated acyl-CoA thioesterase;Dbxref=GO:0005886,GO:0006879,GO:0009279,GO:0015889,GO:0016020,GO:0017038,GO:0022857,GO:0030003,GO:0031992,GO:0042802,GO:0042928,GO:0043213,GO:0050821,GO:0055085,GO:0098797,GO:1902495;gene=exbB;Parent=GCA000010485_03029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_000527844.1,SO:0001217,UniParc:UPI000012A339,UniRef:UniRef100_P0ABU7,UniRef:UniRef50_P0ABU7,UniRef:UniRef90_P0ABU7;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	3102028	3103215	.	+	.	ID=GCA000010485_03030_gene;locus_tag=GCA000010485_03030;gene=metC
contig_1	Pyrodigal	CDS	3102028	3103215	.	+	0	ID=GCA000010485_03030;Name=cystathionine beta-lyase;locus_tag=GCA000010485_03030;product=cystathionine beta-lyase;Dbxref=GO:0005737,GO:0006520,GO:0008784,GO:0009086,GO:0019346,GO:0019450,GO:0030170,GO:0032991,GO:0042802,GO:0047804,GO:0051289,GO:0080146;gene=metC;Parent=GCA000010485_03030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_001299407.1,SO:0001217,UniParc:UPI00005F076E,UniRef:UniRef100_A0A3L1KQX6,UniRef:UniRef50_P06721,UniRef:UniRef90_P06721;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	3103355	3104014	.	+	.	ID=GCA000010485_03031_gene;locus_tag=GCA000010485_03031;gene=yghB
contig_1	Pyrodigal	CDS	3103355	3104014	.	+	0	ID=GCA000010485_03031;Name=Inner membrane protein YghB;locus_tag=GCA000010485_03031;product=Inner membrane protein YghB;Dbxref=GO:0005886,GO:0009410,GO:0022857,GO:0043093,GO:0055085;gene=yghB;Parent=GCA000010485_03031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000268419.1,SO:0001217,UniParc:UPI000013B0AA,UniRef:UniRef100_P0AA60,UniRef:UniRef50_P0AA63,UniRef:UniRef90_P0AA60
contig_1	Pyrodigal	gene	3104054	3105010	.	-	.	ID=GCA000010485_03032_gene;locus_tag=GCA000010485_03032;gene=yqhC
contig_1	Pyrodigal	CDS	3104054	3105010	.	-	0	ID=GCA000010485_03032;Name=DNA-binding transcriptional regulator YqhC;locus_tag=GCA000010485_03032;product=DNA-binding transcriptional regulator YqhC;Dbxref=GO:0000987,GO:0001216,GO:0006355,GO:0045893;gene=yqhC;Parent=GCA000010485_03032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001407451,COG:COG2207,COG:K,SO:0001217,UniParc:UPI00015C4FF8,UniRef:UniRef100_A0A0D6H8U5,UniRef:UniRef50_Q46855,UniRef:UniRef90_Q46855
contig_1	Pyrodigal	gene	3105147	3106310	.	+	.	ID=GCA000010485_03033_gene;locus_tag=GCA000010485_03033;gene=yqhD
contig_1	Pyrodigal	CDS	3105147	3106310	.	+	0	ID=GCA000010485_03033;Name=alcohol dehydrogenase;locus_tag=GCA000010485_03033;product=alcohol dehydrogenase;Dbxref=GO:0000302,GO:0005829,GO:0008106,GO:0008270,GO:0018455,GO:0042802,GO:0046872,GO:1990002,GO:1990362;gene=yqhD;Parent=GCA000010485_03033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1979,KEGG:K08325,RefSeq:WP_001058802.1,SO:0001217,UniParc:UPI0000037A2D,UniRef:UniRef100_Q46856,UniRef:UniRef50_Q46856,UniRef:UniRef90_Q46856;ec_number=1.1.1.2
contig_1	Infernal	gene	3106313	3106376	.	+	.	ID=GCA000010485_03034_gene;locus_tag=GCA000010485_03034;gene=ES173
contig_1	Infernal	ncRNA	3106313	3106376	3.5e-17	+	.	ID=GCA000010485_03034;Name=ES173 sRNA;locus_tag=GCA000010485_03034;product=ES173 sRNA;Dbxref=RFAM:RF02753;Parent=GCA000010485_03034_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02753
contig_1	Pyrodigal	gene	3106415	3107242	.	+	.	ID=GCA000010485_03035_gene;locus_tag=GCA000010485_03035;gene=dkgA
contig_1	Pyrodigal	CDS	3106415	3107242	.	+	0	ID=GCA000010485_03035;Name=2%2C5-didehydrogluconate reductase DkgA;locus_tag=GCA000010485_03035;product=2%2C5-didehydrogluconate reductase DkgA;Dbxref=GO:0004033,GO:0005737,GO:0019853,GO:0050580;gene=dkgA;Parent=GCA000010485_03035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000013152.1,SO:0001217,UniParc:UPI00005EFE64,UniRef:UniRef100_A0A0J3VQ32,UniRef:UniRef50_Q46857,UniRef:UniRef90_Q46857;ec_number=1.1.1.346
contig_1	Pyrodigal	gene	3107442	3108368	.	+	.	ID=GCA000010485_03036_gene;locus_tag=GCA000010485_03036
contig_1	Pyrodigal	CDS	3107442	3108368	.	+	0	ID=GCA000010485_03036;Name=DUF3828 domain-containing protein;locus_tag=GCA000010485_03036;product=DUF3828 domain-containing protein;Parent=GCA000010485_03036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000691604.1,SO:0001217,UniParc:UPI0001C22D19,UniRef:UniRef100_A0A061KKC3,UniRef:UniRef50_Q46858,UniRef:UniRef90_A0A8S0FL08
contig_1	Pyrodigal	gene	3108419	3108676	.	+	.	ID=GCA000010485_03037_gene;locus_tag=GCA000010485_03037;gene=yqhH
contig_1	Pyrodigal	CDS	3108419	3108676	.	+	0	ID=GCA000010485_03037;Name=lipoprotein YqhH;locus_tag=GCA000010485_03037;product=lipoprotein YqhH;Dbxref=GO:0009279;gene=yqhH;Parent=GCA000010485_03037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4238,COG:M,RefSeq:WP_000848528.1,SO:0001217,UniParc:UPI000013BF0F,UniRef:UniRef100_P65298,UniRef:UniRef50_P65298,UniRef:UniRef90_P65298
contig_1	Pyrodigal	gene	3108718	3110937	.	-	.	ID=GCA000010485_03038_gene;locus_tag=GCA000010485_03038;gene=ygiQ
contig_1	Pyrodigal	CDS	3108718	3110937	.	-	0	ID=GCA000010485_03038;Name=YgiQ family radical SAM protein;locus_tag=GCA000010485_03038;product=YgiQ family radical SAM protein;Dbxref=GO:0003824,GO:0005506,GO:0051539,GO:1904047;gene=ygiQ;Parent=GCA000010485_03038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1032,COG:R,RefSeq:WP_000095204.1,SO:0001217,UniParc:UPI0001C22D1A,UniRef:UniRef100_A0A061KM99,UniRef:UniRef50_Q46861,UniRef:UniRef90_Q46861
contig_1	Pyrodigal	gene	3111189	3111938	.	+	.	ID=GCA000010485_03039_gene;locus_tag=GCA000010485_03039
contig_1	Pyrodigal	CDS	3111189	3111938	.	+	0	ID=GCA000010485_03039;Name=FCD domain-containing protein;locus_tag=GCA000010485_03039;product=FCD domain-containing protein;Parent=GCA000010485_03039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000438655.1,SO:0001217,UniParc:UPI0000D50C62,UniRef:UniRef100_A0A061KHM0,UniRef:UniRef50_A0A1C3JG50,UniRef:UniRef90_A0A136SA87
contig_1	Pyrodigal	gene	3112261	3113733	.	+	.	ID=GCA000010485_03040_gene;locus_tag=GCA000010485_03040
contig_1	Pyrodigal	CDS	3112261	3113733	.	+	0	ID=GCA000010485_03040;Name=Mannitol dehydrogenase family protein;locus_tag=GCA000010485_03040;product=Mannitol dehydrogenase family protein;Parent=GCA000010485_03040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296416.1,SO:0001217,UniParc:UPI00021857FE,UniRef:UniRef100_A0A061YDD6,UniRef:UniRef50_A0A655EK34,UniRef:UniRef90_A0A0D6H8D0
contig_1	Pyrodigal	gene	3113730	3114746	.	+	.	ID=GCA000010485_03041_gene;locus_tag=GCA000010485_03041
contig_1	Pyrodigal	CDS	3113730	3114746	.	+	0	ID=GCA000010485_03041;Name=Zinc-binding alcohol dehydrogenase family protein;locus_tag=GCA000010485_03041;product=Zinc-binding alcohol dehydrogenase family protein;Parent=GCA000010485_03041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000853930.1,SO:0001217,UniParc:UPI0001C22D1C,UniRef:UniRef100_A0A061KKC6,UniRef:UniRef50_A0A447NK17,UniRef:UniRef90_A0A376HSS9
contig_1	Pyrodigal	gene	3114757	3115767	.	+	.	ID=GCA000010485_03042_gene;locus_tag=GCA000010485_03042
contig_1	Pyrodigal	CDS	3114757	3115767	.	+	0	ID=GCA000010485_03042;Name=Malate/L-lactate dehydrogenase;locus_tag=GCA000010485_03042;product=Malate/L-lactate dehydrogenase;Parent=GCA000010485_03042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214530.1,SO:0001217,UniParc:UPI0001C22D4A,UniRef:UniRef100_A0A061YHK5,UniRef:UniRef50_A0A564MTD2,UniRef:UniRef90_A0A376D152
contig_1	Pyrodigal	gene	3115840	3116823	.	+	.	ID=GCA000010485_03043_gene;locus_tag=GCA000010485_03043
contig_1	Pyrodigal	CDS	3115840	3116823	.	+	0	ID=GCA000010485_03043;Name=putative TRAP-type C4-dicarboxylate transport system%2C periplasmic component;locus_tag=GCA000010485_03043;product=putative TRAP-type C4-dicarboxylate transport system%2C periplasmic component;Parent=GCA000010485_03043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000645958.1,SO:0001217,UniParc:UPI0001C22D4B,UniRef:UniRef100_A0A061YFR1,UniRef:UniRef50_A0A6N3HBZ9,UniRef:UniRef90_B7UIS1
contig_1	Pyrodigal	gene	3116865	3117347	.	+	.	ID=GCA000010485_03044_gene;locus_tag=GCA000010485_03044
contig_1	Pyrodigal	CDS	3116865	3117347	.	+	0	ID=GCA000010485_03044;Name=TRAP transporter small permease protein;locus_tag=GCA000010485_03044;product=TRAP transporter small permease protein;Parent=GCA000010485_03044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001259753.1,SO:0001217,UniParc:UPI00000DF082,UniRef:UniRef100_E2QE35,UniRef:UniRef50_A0A444RG84,UniRef:UniRef90_A0A444RG84
contig_1	Pyrodigal	gene	3117358	3118662	.	+	.	ID=GCA000010485_03045_gene;locus_tag=GCA000010485_03045
contig_1	Pyrodigal	CDS	3117358	3118662	.	+	0	ID=GCA000010485_03045;Name=TRAP transporter large permease protein;locus_tag=GCA000010485_03045;product=TRAP transporter large permease protein;Parent=GCA000010485_03045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000345269.1,SO:0001217,UniParc:UPI000191E4D0,UniRef:UniRef100_E2QE36,UniRef:UniRef50_P40800,UniRef:UniRef90_A0A376VVW5
contig_1	Pyrodigal	gene	3118733	3120145	.	-	.	ID=GCA000010485_03046_gene;locus_tag=GCA000010485_03046;gene=ftsP
contig_1	Pyrodigal	CDS	3118733	3120145	.	-	0	ID=GCA000010485_03046;Name=cell division protein FtsP;locus_tag=GCA000010485_03046;product=cell division protein FtsP;Dbxref=GO:0005507,GO:0006950,GO:0006979,GO:0010212,GO:0016491,GO:0030288,GO:0032153,GO:0043093,GO:0051301;gene=ftsP;Parent=GCA000010485_03046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2132,COG:DPM,KEGG:K04753,RefSeq:WP_000059395.1,SO:0001217,UniParc:UPI000000E5EF,UniRef:UniRef100_C3SUI2,UniRef:UniRef50_P26648,UniRef:UniRef90_P26648
contig_1	Pyrodigal	gene	3120220	3120957	.	-	.	ID=GCA000010485_03047_gene;locus_tag=GCA000010485_03047;gene=plsC
contig_1	Pyrodigal	CDS	3120220	3120957	.	-	0	ID=GCA000010485_03047;Name=1-acylglycerol-3-phosphate O-acyltransferase;locus_tag=GCA000010485_03047;product=1-acylglycerol-3-phosphate O-acyltransferase;Dbxref=GO:0003841,GO:0005886,GO:0006654,GO:0016024;gene=plsC;Parent=GCA000010485_03047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_000965706.1,SO:0001217,UniParc:UPI0001C22D4C,UniRef:UniRef100_A0A061KMR9,UniRef:UniRef50_P26647,UniRef:UniRef90_P26647;ec_number=2.3.1.51
contig_1	Pyrodigal	gene	3121192	3123450	.	-	.	ID=GCA000010485_03048_gene;locus_tag=GCA000010485_03048;gene=parC
contig_1	Pyrodigal	CDS	3121192	3123450	.	-	0	ID=GCA000010485_03048;Name=DNA topoisomerase IV subunit A;locus_tag=GCA000010485_03048;product=DNA topoisomerase IV subunit A;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0005829,GO:0006265,GO:0007059,GO:0007062,GO:0009330,GO:0009340,GO:0019897,GO:0030541,GO:0034335;gene=parC;Parent=GCA000010485_03048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_001281875.1,SO:0001217,UniParc:UPI0001C22D4D,UniRef:UniRef100_UPI0001C22D4D,UniRef:UniRef50_P0AFI2,UniRef:UniRef90_P0AFI2;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	3123588	3125195	.	-	.	ID=GCA000010485_03049_gene;locus_tag=GCA000010485_03049;gene=ygiS
contig_1	Pyrodigal	CDS	3123588	3125195	.	-	0	ID=GCA000010485_03049;Name=ABC transporter substrate-binding protein;locus_tag=GCA000010485_03049;product=ABC transporter substrate-binding protein;Dbxref=GO:0015721,GO:0015833,GO:0030288,GO:0043190,GO:1904680;gene=ygiS;Parent=GCA000010485_03049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_000288656.1,SO:0001217,UniParc:UPI0001C22D4E,UniRef:UniRef100_UPI0001C22D4E,UniRef:UniRef50_Q46863,UniRef:UniRef90_Q46863
contig_1	Pyrodigal	gene	3125304	3125786	.	-	.	ID=GCA000010485_03050_gene;locus_tag=GCA000010485_03050;gene=ygiV
contig_1	Pyrodigal	CDS	3125304	3125786	.	-	0	ID=GCA000010485_03050;Name=putative transcriptional regulator YgiV;locus_tag=GCA000010485_03050;product=putative transcriptional regulator YgiV;Dbxref=GO:0045892;gene=ygiV;Parent=GCA000010485_03050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3449,COG:L,RefSeq:WP_000183484.1,SO:0001217,UniParc:UPI0001C22D4F,UniRef:UniRef100_A0A3K2RIM6,UniRef:UniRef50_Q46866,UniRef:UniRef90_Q46866
contig_1	Pyrodigal	gene	3125839	3126231	.	-	.	ID=GCA000010485_03051_gene;locus_tag=GCA000010485_03051;gene=ygiW
contig_1	Pyrodigal	CDS	3125839	3126231	.	-	0	ID=GCA000010485_03051;Name=OB fold stress tolerance protein YgiW;locus_tag=GCA000010485_03051;product=OB fold stress tolerance protein YgiW;Dbxref=GO:0030288,GO:0044011,GO:0070301,GO:0071276;gene=ygiW;Parent=GCA000010485_03051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000712658,COG:COG3111,COG:S,RefSeq:WP_000712658.1,SO:0001217,UniParc:UPI000013B0D0,UniRef:UniRef100_P0ADU5,UniRef:UniRef50_P0ADU5,UniRef:UniRef90_P0ADU5
contig_1	Pyrodigal	gene	3126383	3127042	.	+	.	ID=GCA000010485_03052_gene;locus_tag=GCA000010485_03052;gene=qseB
contig_1	Pyrodigal	CDS	3126383	3127042	.	+	0	ID=GCA000010485_03052;Name=quorum sensing response regulator transcription factor QseB;locus_tag=GCA000010485_03052;product=quorum sensing response regulator transcription factor QseB;gene=qseB;Parent=GCA000010485_03052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001221490.1,SO:0001217,UniParc:UPI0001C22D50,UniRef:UniRef100_UPI0001C22D50,UniRef:UniRef90_P52076
contig_1	Pyrodigal	gene	3127039	3128388	.	+	.	ID=GCA000010485_03053_gene;locus_tag=GCA000010485_03053;gene=qseC
contig_1	Pyrodigal	CDS	3127039	3128388	.	+	0	ID=GCA000010485_03053;Name=quorum sensing histidine kinase QseC;locus_tag=GCA000010485_03053;product=quorum sensing histidine kinase QseC;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0007165,GO:0036094,GO:2000145;gene=qseC;Parent=GCA000010485_03053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,RefSeq:WP_000673389.1,SO:0001217,UniParc:UPI00005EF91D,UniRef:UniRef100_UPI00005EF91D,UniRef:UniRef50_P40719,UniRef:UniRef90_P40719;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3128434	3128766	.	-	.	ID=GCA000010485_03054_gene;locus_tag=GCA000010485_03054
contig_1	Pyrodigal	CDS	3128434	3128766	.	-	0	ID=GCA000010485_03054;Name=Inner membrane protein;locus_tag=GCA000010485_03054;product=Inner membrane protein;Parent=GCA000010485_03054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000914696.1,SO:0001217,UniParc:UPI0000D50C6D,UniRef:UniRef100_A0A2G9AA52,UniRef:UniRef50_Q46867,UniRef:UniRef90_A0A0H3ENS7
contig_1	Pyrodigal	gene	3128773	3129483	.	-	.	ID=GCA000010485_03055_gene;locus_tag=GCA000010485_03055
contig_1	Pyrodigal	CDS	3128773	3129483	.	-	0	ID=GCA000010485_03055;Name=Transglycosylase SLT domain-containing protein;locus_tag=GCA000010485_03055;product=Transglycosylase SLT domain-containing protein;Parent=GCA000010485_03055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000834022.1,SO:0001217,UniParc:UPI0001C22D51,UniRef:UniRef100_UPI0001C22D51,UniRef:UniRef50_A0A376NUM0,UniRef:UniRef90_A0A376NUM0
contig_1	Pyrodigal	gene	3129486	3129965	.	-	.	ID=GCA000010485_03056_gene;locus_tag=GCA000010485_03056
contig_1	Pyrodigal	CDS	3129486	3129965	.	-	0	ID=GCA000010485_03056;Name=Secreted protein hcp;locus_tag=GCA000010485_03056;product=Secreted protein hcp;Parent=GCA000010485_03056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06887,RefSeq:WP_000065331.1,SO:0001217,UniParc:UPI0001C22D52,UniRef:UniRef100_UPI0001C22D52,UniRef:UniRef50_Q6DAS7,UniRef:UniRef90_A0A2I7QH10
contig_1	Pyrodigal	gene	3130215	3130796	.	+	.	ID=GCA000010485_03057_gene;locus_tag=GCA000010485_03057;gene=mdaB
contig_1	Pyrodigal	CDS	3130215	3130796	.	+	0	ID=GCA000010485_03057;Name=NADPH:quinone oxidoreductase MdaB;locus_tag=GCA000010485_03057;product=NADPH:quinone oxidoreductase MdaB;Dbxref=GO:0005829,GO:0008753,GO:0050660;gene=mdaB;Parent=GCA000010485_03057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000065430,RefSeq:WP_000065430.1,SO:0001217,UniParc:UPI00000480D3,UniRef:UniRef100_P0AEY5,UniRef:UniRef50_P0AEY5,UniRef:UniRef90_P0AEY5;ec_number=1.6.5.10
contig_1	Pyrodigal	gene	3130827	3131141	.	+	.	ID=GCA000010485_03058_gene;locus_tag=GCA000010485_03058;gene=ygiN
contig_1	Pyrodigal	CDS	3130827	3131141	.	+	0	ID=GCA000010485_03058;Name=putative quinol monooxygenase YgiN;locus_tag=GCA000010485_03058;product=putative quinol monooxygenase YgiN;Dbxref=GO:0005829,GO:0010447,GO:0016491,GO:0042803;gene=ygiN;Parent=GCA000010485_03058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1359,RefSeq:WP_000633738.1,SO:0001217,UniParc:UPI00000DF089,UniRef:UniRef100_E2QE49,UniRef:UniRef50_P0ADU2,UniRef:UniRef90_P0ADU2;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3131186	3132073	.	-	.	ID=GCA000010485_03059_gene;locus_tag=GCA000010485_03059
contig_1	Pyrodigal	CDS	3131186	3132073	.	-	0	ID=GCA000010485_03059;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000010485_03059;product=MurR/RpiR family transcriptional regulator;Parent=GCA000010485_03059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000614945.1,SO:0001217,UniParc:UPI00005EF91C,UniRef:UniRef100_A0A0V9RHJ6,UniRef:UniRef50_A0A0C7FD55,UniRef:UniRef90_A0A2B7LWI7
contig_1	Pyrodigal	gene	3132070	3133017	.	-	.	ID=GCA000010485_03060_gene;locus_tag=GCA000010485_03060
contig_1	Pyrodigal	CDS	3132070	3133017	.	-	0	ID=GCA000010485_03060;Name=ABC transporter substrate-binding protein;locus_tag=GCA000010485_03060;product=ABC transporter substrate-binding protein;Parent=GCA000010485_03060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001531973.1,SO:0001217,UniParc:UPI0001C22D53,UniRef:UniRef100_A0A7I0KY38,UniRef:UniRef50_A0A485BR15,UniRef:UniRef90_A0A023KTM2
contig_1	Pyrodigal	gene	3133028	3134077	.	-	.	ID=GCA000010485_03061_gene;locus_tag=GCA000010485_03061
contig_1	Pyrodigal	CDS	3133028	3134077	.	-	0	ID=GCA000010485_03061;Name=Iron compound ABC transporter permease;locus_tag=GCA000010485_03061;product=Iron compound ABC transporter permease;Parent=GCA000010485_03061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000D50C71,UniRef:UniRef100_A0A067HEM0,UniRef:UniRef50_A0A4U9CY03,UniRef:UniRef90_A0A370V4Q6
contig_1	Pyrodigal	gene	3134074	3135057	.	-	.	ID=GCA000010485_03062_gene;locus_tag=GCA000010485_03062
contig_1	Pyrodigal	CDS	3134074	3135057	.	-	0	ID=GCA000010485_03062;Name=Iron compound ABC transporter permease;locus_tag=GCA000010485_03062;product=Iron compound ABC transporter permease;Parent=GCA000010485_03062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000986445.1,SO:0001217,UniParc:UPI0001C22D54,UniRef:UniRef100_A0A7I0L6B8,UniRef:UniRef50_A0A1Y2LCQ1,UniRef:UniRef90_A0A376MID1
contig_1	Pyrodigal	gene	3135054	3135863	.	-	.	ID=GCA000010485_03063_gene;locus_tag=GCA000010485_03063
contig_1	Pyrodigal	CDS	3135054	3135863	.	-	0	ID=GCA000010485_03063;Name=ABC transporter;locus_tag=GCA000010485_03063;product=ABC transporter;Parent=GCA000010485_03063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000940874.1,SO:0001217,UniParc:UPI000176AEB6,UniRef:UniRef100_A0A067HMI5,UniRef:UniRef50_A0A085JGC0,UniRef:UniRef90_A0A067HMI5
contig_1	Pyrodigal	gene	3136237	3138378	.	+	.	ID=GCA000010485_03064_gene;locus_tag=GCA000010485_03064
contig_1	Pyrodigal	CDS	3136237	3138378	.	+	0	ID=GCA000010485_03064;Name=Ferrichrome-iron receptor;locus_tag=GCA000010485_03064;product=Ferrichrome-iron receptor;Parent=GCA000010485_03064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001240664.1,SO:0001217,UniParc:UPI0001C22D55,UniRef:UniRef100_A0A061KI80,UniRef:UniRef50_V5Z3G1,UniRef:UniRef90_A0A2B7M4E7
contig_1	Pyrodigal	gene	3138442	3140334	.	-	.	ID=GCA000010485_03065_gene;locus_tag=GCA000010485_03065;gene=parE
contig_1	Pyrodigal	CDS	3138442	3140334	.	-	0	ID=GCA000010485_03065;Name=DNA topoisomerase 4 subunit B;locus_tag=GCA000010485_03065;product=DNA topoisomerase 4 subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872;gene=parE;Parent=GCA000010485_03065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000195318,COG:COG0187,COG:L,RefSeq:WP_000195275.1,SO:0001217,UniParc:UPI0001C22D56,UniRef:UniRef100_A0A066STB3,UniRef:UniRef50_P20083,UniRef:UniRef90_P20083;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	3140363	3140944	.	-	.	ID=GCA000010485_03066_gene;locus_tag=GCA000010485_03066;gene=cpdA
contig_1	Pyrodigal	CDS	3140363	3140944	.	-	0	ID=GCA000010485_03066;Name=3'%2C5'-cyclic-AMP phosphodiesterase;locus_tag=GCA000010485_03066;product=3'%2C5'-cyclic-AMP phosphodiesterase;Dbxref=GO:0004115,GO:0052689;gene=cpdA;Parent=GCA000010485_03066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3150,COG:R,KEGG:K07000,RefSeq:WP_000105733.1,SO:0001217,UniParc:UPI000013BF18,UniRef:UniRef100_P0A8Z7,UniRef:UniRef50_P0A8Z7,UniRef:UniRef90_P0A8Z7;ec_number=3.1.4.53
contig_1	Pyrodigal	gene	3140944	3141771	.	-	.	ID=GCA000010485_03067_gene;locus_tag=GCA000010485_03067;gene=cpdA
contig_1	Pyrodigal	CDS	3140944	3141771	.	-	0	ID=GCA000010485_03067;Name=3'%2C5'-cyclic-AMP phosphodiesterase;locus_tag=GCA000010485_03067;product=3'%2C5'-cyclic-AMP phosphodiesterase;Dbxref=GO:0000166,GO:0004115,GO:0046872;gene=cpdA;Parent=GCA000010485_03067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_000444744.1,SO:0001217,UniParc:UPI00000DF08E,UniRef:UniRef100_E2QE58,UniRef:UniRef50_P0AEW4,UniRef:UniRef90_P0AEW4;ec_number=3.1.4.53
contig_1	Pyrodigal	gene	3141796	3142218	.	-	.	ID=GCA000010485_03068_gene;locus_tag=GCA000010485_03068;gene=yqiB
contig_1	Pyrodigal	CDS	3141796	3142218	.	-	0	ID=GCA000010485_03068;Name=DUF1249 domain-containing protein;locus_tag=GCA000010485_03068;product=DUF1249 domain-containing protein;gene=yqiB;Parent=GCA000010485_03068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3151,COG:S,RefSeq:WP_000833393.1,SO:0001217,UniParc:UPI000013BF1A,UniRef:UniRef100_P0ADU7,UniRef:UniRef50_P0ADU7,UniRef:UniRef90_P0ADU7
contig_1	Pyrodigal	gene	3142219	3142848	.	-	.	ID=GCA000010485_03069_gene;locus_tag=GCA000010485_03069;gene=nudF
contig_1	Pyrodigal	CDS	3142219	3142848	.	-	0	ID=GCA000010485_03069;Name=ADP-ribose diphosphatase;locus_tag=GCA000010485_03069;product=ADP-ribose diphosphatase;Dbxref=GO:0005829,GO:0006753,GO:0016787,GO:0019144,GO:0019693,GO:0046872,GO:0047631;gene=nudF;Parent=GCA000010485_03069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000917117.1,SO:0001217,UniParc:UPI0000111831,UniRef:UniRef100_Q93K97,UniRef:UniRef50_Q93K97,UniRef:UniRef90_Q93K97;ec_number=3.6.1.13
contig_1	Pyrodigal	gene	3143053	3144534	.	+	.	ID=GCA000010485_03070_gene;locus_tag=GCA000010485_03070;gene=tolC
contig_1	Pyrodigal	CDS	3143053	3144534	.	+	0	ID=GCA000010485_03070;Name=outer membrane channel protein TolC;locus_tag=GCA000010485_03070;product=outer membrane channel protein TolC;Dbxref=GO:0005216,GO:0009279,GO:0009410,GO:0009636,GO:0014070,GO:0015125,GO:0015288,GO:0015562,GO:0015721,GO:0016020,GO:0030288,GO:0034220,GO:0042802,GO:0042930,GO:0042931,GO:0046677,GO:0055085,GO:0098567,GO:0140330,GO:1990196,GO:1990281,GO:1990961;gene=tolC;Parent=GCA000010485_03070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1538,COG:M,RefSeq:WP_000735289.1,SO:0001217,UniParc:UPI0000DACFF9,UniRef:UniRef100_E2QE61,UniRef:UniRef50_P02930,UniRef:UniRef90_P02930
contig_1	Pyrodigal	gene	3144682	3145353	.	+	.	ID=GCA000010485_03071_gene;locus_tag=GCA000010485_03071;gene=ygiB
contig_1	Pyrodigal	CDS	3144682	3145353	.	+	0	ID=GCA000010485_03071;Name=DUF1190 domain-containing protein;locus_tag=GCA000010485_03071;product=DUF1190 domain-containing protein;Dbxref=GO:0009279,GO:0044010;gene=ygiB;Parent=GCA000010485_03071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5463,COG:S,RefSeq:WP_000831543.1,SO:0001217,UniParc:UPI0000DB2BFF,UniRef:UniRef100_P0ADT2,UniRef:UniRef50_P0ADT2,UniRef:UniRef90_P0ADT2
contig_1	Pyrodigal	gene	3145359	3146519	.	+	.	ID=GCA000010485_03072_gene;locus_tag=GCA000010485_03072;gene=gsp
contig_1	Pyrodigal	CDS	3145359	3146519	.	+	0	ID=GCA000010485_03072;Name=Glutathionylspermidine synthase;locus_tag=GCA000010485_03072;product=Glutathionylspermidine synthase;gene=gsp;Parent=GCA000010485_03072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0754,COG:E,RefSeq:WP_000442882.1,SO:0001217,UniParc:UPI0001C22D57,UniRef:UniRef100_A0A066T1S5,UniRef:UniRef50_P0ADT5,UniRef:UniRef90_A0A2B7LWE8
contig_1	Pyrodigal	gene	3147004	3148800	.	+	.	ID=GCA000010485_03073_gene;locus_tag=GCA000010485_03073;gene=assT
contig_1	Pyrodigal	CDS	3147004	3148800	.	+	0	ID=GCA000010485_03073;Name=Arylsulfate sulfotransferase AssT;locus_tag=GCA000010485_03073;product=Arylsulfate sulfotransferase AssT;Dbxref=GO:0004062,GO:0042597,GO:0042802,GO:0047686;gene=assT;Parent=GCA000010485_03073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01023,RefSeq:WP_000459860.1,SO:0001217,UniParc:UPI0001C22D58,UniRef:UniRef100_A0A066T1N9,UniRef:UniRef50_Q8FDI4,UniRef:UniRef90_Q8FDI4;ec_number=2.8.2.22
contig_1	Pyrodigal	gene	3148818	3149486	.	+	.	ID=GCA000010485_03074_gene;locus_tag=GCA000010485_03074;gene=dsbL
contig_1	Pyrodigal	CDS	3148818	3149486	.	+	0	ID=GCA000010485_03074;Name=Thiol:disulfide interchange protein DsbL;locus_tag=GCA000010485_03074;product=Thiol:disulfide interchange protein DsbL;Dbxref=GO:0015035,GO:0042597;gene=dsbL;Parent=GCA000010485_03074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2761,COG:O,KEGG:K03673,RefSeq:WP_000040020.1,SO:0001217,UniParc:UPI00000439A6,UniRef:UniRef100_P0A4L7,UniRef:UniRef50_P0A4L7,UniRef:UniRef90_P0A4L7;ec_number=1.8.4.15
contig_1	Pyrodigal	gene	3149501	3150172	.	+	.	ID=GCA000010485_03075_gene;locus_tag=GCA000010485_03075;gene=dsbI
contig_1	Pyrodigal	CDS	3149501	3150172	.	+	0	ID=GCA000010485_03075;Name=protein-disulfide oxidoreductase DsbI;locus_tag=GCA000010485_03075;product=protein-disulfide oxidoreductase DsbI;Dbxref=GO:0005886,GO:0006457,GO:0015035;gene=dsbI;Parent=GCA000010485_03075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03611,RefSeq:WP_000511508.1,SO:0001217,UniParc:UPI0001C22D59,UniRef:UniRef100_A0A066STM1,UniRef:UniRef50_P0A1H1,UniRef:UniRef90_A1AFW3;ec_number=1.8.5.9
contig_1	Pyrodigal	gene	3150218	3151033	.	-	.	ID=GCA000010485_03076_gene;locus_tag=GCA000010485_03076;gene=ygiD
contig_1	Pyrodigal	CDS	3150218	3151033	.	-	0	ID=GCA000010485_03076;Name=4%2C5-DOPA dioxygenase extradiol;locus_tag=GCA000010485_03076;product=4%2C5-DOPA dioxygenase extradiol;Dbxref=GO:0005737,GO:0008198,GO:0008270,GO:0050297;gene=ygiD;Parent=GCA000010485_03076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15777,SO:0001217,UniParc:UPI0001C22D5A,UniRef:UniRef100_A0A3P4ZT33,UniRef:UniRef50_P24197,UniRef:UniRef90_P24197;ec_number=1.13.11.29
contig_1	Pyrodigal	gene	3151149	3151922	.	+	.	ID=GCA000010485_03077_gene;locus_tag=GCA000010485_03077;gene=zupT
contig_1	Pyrodigal	CDS	3151149	3151922	.	+	0	ID=GCA000010485_03077;Name=zinc transporter ZupT;locus_tag=GCA000010485_03077;product=zinc transporter ZupT;Dbxref=GO:0005385,GO:0005886,GO:0046872;gene=zupT;Parent=GCA000010485_03077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0428,COG:P,RefSeq:WP_001295627.1,SO:0001217,UniParc:UPI0000046C4F,UniRef:UniRef100_P0A8H3,UniRef:UniRef50_P0A8H3,UniRef:UniRef90_P0A8H3
contig_1	Pyrodigal	gene	3152733	3153296	.	+	.	ID=GCA000010485_03078_gene;locus_tag=GCA000010485_03078
contig_1	Pyrodigal	CDS	3152733	3153296	.	+	0	ID=GCA000010485_03078;Name=fimbrial-like protein;locus_tag=GCA000010485_03078;product=fimbrial-like protein;Parent=GCA000010485_03078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000915008.1,SO:0001217,UniParc:UPI0001C22D80,UniRef:UniRef100_A0A066ST99,UniRef:UniRef50_P39834,UniRef:UniRef90_A0A0P7Q0N3
contig_1	Pyrodigal	gene	3153381	3155903	.	+	.	ID=GCA000010485_03079_gene;locus_tag=GCA000010485_03079
contig_1	Pyrodigal	CDS	3153381	3155903	.	+	0	ID=GCA000010485_03079;Name=Outer membrane protein;locus_tag=GCA000010485_03079;product=Outer membrane protein;Parent=GCA000010485_03079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12518,RefSeq:WP_001060691.1,SO:0001217,UniParc:UPI0001C22D81,UniRef:UniRef100_A0A066STL9,UniRef:UniRef50_P76655,UniRef:UniRef90_A0A4C7ACR3
contig_1	Pyrodigal	gene	3155919	3156659	.	+	.	ID=GCA000010485_03080_gene;locus_tag=GCA000010485_03080
contig_1	Pyrodigal	CDS	3155919	3156659	.	+	0	ID=GCA000010485_03080;Name=Fimbria/pilus periplasmic chaperone;locus_tag=GCA000010485_03080;product=Fimbria/pilus periplasmic chaperone;Parent=GCA000010485_03080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000841836.1,SO:0001217,UniParc:UPI0002185849,UniRef:UniRef100_A0A1Y5BI51,UniRef:UniRef50_E5YCR3,UniRef:UniRef90_A0A0X5DX09
contig_1	Pyrodigal	gene	3156656	3157705	.	+	.	ID=GCA000010485_03081_gene;locus_tag=GCA000010485_03081
contig_1	Pyrodigal	CDS	3156656	3157705	.	+	0	ID=GCA000010485_03081;Name=Pilus assembly protein;locus_tag=GCA000010485_03081;product=Pilus assembly protein;Parent=GCA000010485_03081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000631281.1,SO:0001217,UniParc:UPI0001C22D83,UniRef:UniRef100_A0A061KMU3,UniRef:UniRef50_E3G3A8,UniRef:UniRef90_A0A3L4YCR4
contig_1	Pyrodigal	gene	3157759	3158412	.	-	.	ID=GCA000010485_03082_gene;locus_tag=GCA000010485_03082;gene=ribB
contig_1	Pyrodigal	CDS	3157759	3158412	.	-	0	ID=GCA000010485_03082;Name=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;locus_tag=GCA000010485_03082;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;Dbxref=GO:0000287,GO:0005829,GO:0008686,GO:0009231,GO:0030145;gene=ribB;Parent=GCA000010485_03082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0108,COG:H,RefSeq:WP_001076989.1,SO:0001217,UniParc:UPI00000DF092,UniRef:UniRef100_B7UIV5,UniRef:UniRef50_P0A7J0,UniRef:UniRef90_P0A7J0;ec_number=4.1.99.12
contig_1	Infernal	regulatory_region	3158516	3158664	2.7e-20	-	.	ID=EFPPCJGBKI_292;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	3158786	3159085	.	+	.	ID=GCA000010485_03083_gene;locus_tag=GCA000010485_03083;gene=ubiK
contig_1	Pyrodigal	CDS	3158786	3159085	.	+	0	ID=GCA000010485_03083;Name=ubiquinone biosynthesis accessory factor UbiK;locus_tag=GCA000010485_03083;product=ubiquinone biosynthesis accessory factor UbiK;Dbxref=GO:0006744,GO:0042802;gene=ubiK;Parent=GCA000010485_03083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_133301121,COG:COG2960,COG:H,KEGG:K09806,RefSeq:WP_001296423.1,SO:0001217,UniParc:UPI0001C22D84,UniRef:UniRef100_A0A061KHQ3,UniRef:UniRef50_Q46868,UniRef:UniRef90_A0A2X1MRC9
contig_1	Pyrodigal	gene	3159120	3159320	.	-	.	ID=GCA000010485_03084_gene;locus_tag=GCA000010485_03084
contig_1	Pyrodigal	CDS	3159120	3159320	.	-	0	ID=GCA000010485_03084;Name=Surface composition regulator;locus_tag=GCA000010485_03084;product=Surface composition regulator;Parent=GCA000010485_03084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296424.1,SO:0001217,UniParc:UPI000012B5D6,UniRef:UniRef100_B7UIV7,UniRef:UniRef90_Q7UBJ0
contig_1	Pyrodigal	gene	3159590	3160219	.	+	.	ID=GCA000010485_03085_gene;locus_tag=GCA000010485_03085
contig_1	Pyrodigal	CDS	3159590	3160219	.	+	0	ID=GCA000010485_03085;Name=DUF1449 domain-containing protein;locus_tag=GCA000010485_03085;product=DUF1449 domain-containing protein;Parent=GCA000010485_03085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000599932.1,SO:0001217,UniParc:UPI0000D50C7C,UniRef:UniRef100_E2QE76,UniRef:UniRef50_P76657,UniRef:UniRef90_E2QE76
contig_1	Pyrodigal	gene	3160246	3161907	.	+	.	ID=GCA000010485_03086_gene;locus_tag=GCA000010485_03086;gene=yqiK
contig_1	Pyrodigal	CDS	3160246	3161907	.	+	0	ID=GCA000010485_03086;Name=Flotillin family inner membrane protein YqiK;locus_tag=GCA000010485_03086;product=Flotillin family inner membrane protein YqiK;Dbxref=GO:0005829,GO:0005886,GO:0045121;gene=yqiK;Parent=GCA000010485_03086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2268,COG:R,RefSeq:WP_001296425.1,SO:0001217,UniParc:UPI00018875EB,UniRef:UniRef100_A0A066T1M3,UniRef:UniRef50_P77306,UniRef:UniRef90_P77306
contig_1	Infernal	gene	3162132	3162281	.	-	.	ID=GCA000010485_03087_gene;locus_tag=GCA000010485_03087;gene=SIB_RNA
contig_1	Infernal	ncRNA	3162132	3162281	4.2e-23	-	.	ID=GCA000010485_03087;Name=Short Intergenic Abundant RNA;locus_tag=GCA000010485_03087;product=Short Intergenic Abundant RNA;Dbxref=RFAM:RF00113;Parent=GCA000010485_03087_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00113
contig_1	Bakta	gene	3162147	3162206	.	+	.	ID=GCA000010485_03088_gene;locus_tag=GCA000010485_03088;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	3162147	3162206	.	+	0	ID=GCA000010485_03088;Name=Type I toxin-antitoxin system Ibs family toxin;locus_tag=GCA000010485_03088;product=Type I toxin-antitoxin system Ibs family toxin;Parent=GCA000010485_03088_gene;Note=RefSeq:WP_001387082.1,SO:0001217,UniParc:UPI0001F308DE,UniRef:UniRef100_A0A024LAN1,UniRef:UniRef50_A0A024LAN1,UniRef:UniRef90_A0A024LAN1
contig_1	Pyrodigal	gene	3162326	3163759	.	-	.	ID=GCA000010485_03089_gene;locus_tag=GCA000010485_03089;gene=hldE
contig_1	Pyrodigal	CDS	3162326	3163759	.	-	0	ID=GCA000010485_03089;Name=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;locus_tag=GCA000010485_03089;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;Dbxref=GO:0005524,GO:0005829,GO:0005975,GO:0009058,GO:0009244,GO:0016773,GO:0016779,GO:0033785,GO:0033786,GO:0097171;gene=hldE;Parent=GCA000010485_03089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2870,COG:M,KEGG:K03272,RefSeq:WP_000869177.1,SO:0001217,UniParc:UPI00000DF096,UniRef:UniRef100_B7MAC8,UniRef:UniRef50_P76658,UniRef:UniRef90_P76658;ec_number=2.7.7.70
contig_1	Pyrodigal	gene	3163807	3166647	.	-	.	ID=GCA000010485_03090_gene;locus_tag=GCA000010485_03090;gene=glnE
contig_1	Pyrodigal	CDS	3163807	3166647	.	-	0	ID=GCA000010485_03090;Name=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;locus_tag=GCA000010485_03090;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;Dbxref=GO:0008882;gene=glnE;Parent=GCA000010485_03090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00982,RefSeq:WP_001296426.1,SO:0001217,UniParc:UPI0001C22D86,UniRef:UniRef100_A0A061KHQ5,UniRef:UniRef50_P30870,UniRef:UniRef90_A0A0J1MHS9;ec_number=2.7.7.89
contig_1	Pyrodigal	gene	3166670	3167971	.	-	.	ID=GCA000010485_03091_gene;locus_tag=GCA000010485_03091;gene=ygiF
contig_1	Pyrodigal	CDS	3166670	3167971	.	-	0	ID=GCA000010485_03091;Name=inorganic triphosphatase;locus_tag=GCA000010485_03091;product=inorganic triphosphatase;Dbxref=GO:0046872,GO:0050355;gene=ygiF;Parent=GCA000010485_03091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000046281,COG:COG3025,COG:P,KEGG:K18446,RefSeq:WP_000046307.1,SO:0001217,UniParc:UPI0001C22D87,UniRef:UniRef100_A0A066STK9,UniRef:UniRef50_P30871,UniRef:UniRef90_P30871;ec_number=3.6.1.25
contig_1	Pyrodigal	gene	3168213	3168833	.	+	.	ID=GCA000010485_03092_gene;locus_tag=GCA000010485_03092;gene=ygiM
contig_1	Pyrodigal	CDS	3168213	3168833	.	+	0	ID=GCA000010485_03092;Name=TIGR04211 family SH3 domain-containing protein;locus_tag=GCA000010485_03092;product=TIGR04211 family SH3 domain-containing protein;Dbxref=GO:0016020;gene=ygiM;Parent=GCA000010485_03092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3103,COG:R,RefSeq:WP_001125335.1,SO:0001217,UniParc:UPI0001C22D88,UniRef:UniRef100_A0A066T1L8,UniRef:UniRef50_P0ADT8,UniRef:UniRef90_P0ADT8
contig_1	Pyrodigal	gene	3168897	3170135	.	+	.	ID=GCA000010485_03093_gene;locus_tag=GCA000010485_03093;gene=cca
contig_1	Pyrodigal	CDS	3168897	3170135	.	+	0	ID=GCA000010485_03093;Name=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;locus_tag=GCA000010485_03093;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;Dbxref=GO:0000049,GO:0000287,GO:0001680,GO:0003723,GO:0004112,GO:0004810,GO:0005524,GO:0016791,GO:0042245,GO:0160016;gene=cca;Parent=GCA000010485_03093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000708487,COG:COG0617,COG:J,RefSeq:WP_000708472.1,SO:0001217,UniParc:UPI0001C22D89,UniRef:UniRef100_A0A7I0KY13,UniRef:UniRef50_P06961,UniRef:UniRef90_Q8ZLY4;ec_number=3.1.4.-
contig_1	Pyrodigal	gene	3170215	3171036	.	-	.	ID=GCA000010485_03094_gene;locus_tag=GCA000010485_03094;gene=bacA
contig_1	Pyrodigal	CDS	3170215	3171036	.	-	0	ID=GCA000010485_03094;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000010485_03094;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555;gene=bacA;Parent=GCA000010485_03094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06153,RefSeq:WP_001296428.1,SO:0001217,UniParc:UPI000187BF22,UniRef:UniRef100_B7UIW5,UniRef:UniRef50_Q8ZI65,UniRef:UniRef90_Q3YXI5;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	3171127	3171495	.	-	.	ID=GCA000010485_03095_gene;locus_tag=GCA000010485_03095;gene=folB
contig_1	Pyrodigal	CDS	3171127	3171495	.	-	0	ID=GCA000010485_03095;Name=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;locus_tag=GCA000010485_03095;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;Dbxref=GO:0004150,GO:0005737,GO:0006760,GO:0016853,GO:0042802,GO:0046654,GO:0046656;gene=folB;Parent=GCA000010485_03095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_001295541.1,SO:0001217,UniParc:UPI000012AB42,UniRef:UniRef100_P0AC16,UniRef:UniRef50_P0AC16,UniRef:UniRef90_P0AC16;ec_number=5.1.99.8
contig_1	Pyrodigal	gene	3171600	3172217	.	+	.	ID=GCA000010485_03096_gene;locus_tag=GCA000010485_03096;gene=plsY
contig_1	Pyrodigal	CDS	3171600	3172217	.	+	0	ID=GCA000010485_03096;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA000010485_03096;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0004366,GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772;gene=plsY;Parent=GCA000010485_03096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_001272796.1,SO:0001217,UniParc:UPI000013B0C3,UniRef:UniRef100_A7ZRU0,UniRef:UniRef50_P67161,UniRef:UniRef90_P59252;ec_number=2.3.1.275
contig_1	Pyrodigal	gene	3172230	3173162	.	-	.	ID=GCA000010485_03097_gene;locus_tag=GCA000010485_03097;gene=ttdR
contig_1	Pyrodigal	CDS	3172230	3173162	.	-	0	ID=GCA000010485_03097;Name=DNA-binding transcriptional activator TtdR;locus_tag=GCA000010485_03097;product=DNA-binding transcriptional activator TtdR;Dbxref=GO:0003700,GO:0006351,GO:0043565;gene=ttdR;Parent=GCA000010485_03097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000935206,KEGG:K21742,RefSeq:WP_000935202.1,SO:0001217,UniParc:UPI00005EF906,UniRef:UniRef100_Q8FDH0,UniRef:UniRef50_P45463,UniRef:UniRef90_Q8FDH0
contig_1	Pyrodigal	gene	3173369	3174280	.	+	.	ID=GCA000010485_03098_gene;locus_tag=GCA000010485_03098;gene=ttdA
contig_1	Pyrodigal	CDS	3173369	3174280	.	+	0	ID=GCA000010485_03098;Name=L(+)-tartrate dehydratase subunit alpha;locus_tag=GCA000010485_03098;product=L(+)-tartrate dehydratase subunit alpha;Dbxref=GO:0008730,GO:0046872,GO:0051539;gene=ttdA;Parent=GCA000010485_03098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1951,KEGG:K03779,RefSeq:WP_000986806.1,SO:0001217,UniParc:UPI00017A95AA,UniRef:UniRef100_A0A0J3VP59,UniRef:UniRef50_P05847,UniRef:UniRef90_P05847;ec_number=4.2.1.32
contig_1	Pyrodigal	gene	3174277	3174882	.	+	.	ID=GCA000010485_03099_gene;locus_tag=GCA000010485_03099;gene=ttdB
contig_1	Pyrodigal	CDS	3174277	3174882	.	+	0	ID=GCA000010485_03099;Name=L(+)-tartrate dehydratase subunit beta;locus_tag=GCA000010485_03099;product=L(+)-tartrate dehydratase subunit beta;Dbxref=GO:0008730,GO:0016836;gene=ttdB;Parent=GCA000010485_03099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1838,KEGG:K03780,RefSeq:WP_000722957.1,SO:0001217,UniParc:UPI000000E60A,UniRef:UniRef100_P0AC35,UniRef:UniRef50_P0AC35,UniRef:UniRef90_P0AC35;ec_number=4.2.1.32
contig_1	Pyrodigal	gene	3174930	3176393	.	+	.	ID=GCA000010485_03100_gene;locus_tag=GCA000010485_03100;gene=ttdT
contig_1	Pyrodigal	CDS	3174930	3176393	.	+	0	ID=GCA000010485_03100;Name=L-tartrate/succinate antiporter;locus_tag=GCA000010485_03100;product=L-tartrate/succinate antiporter;Dbxref=GO:0005886,GO:0015297;gene=ttdT;Parent=GCA000010485_03100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000804973,COG:COG0471,COG:G,KEGG:K11106,RefSeq:WP_000804948.1,SO:0001217,UniParc:UPI0001C22D8A,UniRef:UniRef100_A0A066STJ9,UniRef:UniRef50_P39414,UniRef:UniRef90_P39414
contig_1	Pyrodigal	gene	3176436	3177449	.	-	.	ID=GCA000010485_03101_gene;locus_tag=GCA000010485_03101;gene=tsaD
contig_1	Pyrodigal	CDS	3176436	3177449	.	-	0	ID=GCA000010485_03101;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000010485_03101;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000010485_03101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_001264377.1,SO:0001217,UniParc:UPI00000DF09E,UniRef:UniRef100_B7MB00,UniRef:UniRef50_P05852,UniRef:UniRef90_B7MB00;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	3177687	3177902	.	+	.	ID=GCA000010485_03102_gene;locus_tag=GCA000010485_03102;gene=rpsU
contig_1	Pyrodigal	CDS	3177687	3177902	.	+	0	ID=GCA000010485_03102;Name=30S ribosomal protein S21;locus_tag=GCA000010485_03102;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA000010485_03102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_001144069.1,SO:0001217,UniParc:UPI000005A4AC,UniRef:UniRef100_A8APV6,UniRef:UniRef50_A8APV6,UniRef:UniRef90_A8APV6
contig_1	Pyrodigal	gene	3178013	3179758	.	+	.	ID=GCA000010485_03103_gene;locus_tag=GCA000010485_03103;gene=dnaG
contig_1	Pyrodigal	CDS	3178013	3179758	.	+	0	ID=GCA000010485_03103;Name=DNA primase;locus_tag=GCA000010485_03103;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003896,GO:0005737,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000010485_03103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_000918810.1,SO:0001217,UniParc:UPI0001C22D8B,UniRef:UniRef100_A0A061KMV6,UniRef:UniRef50_P0ABS5,UniRef:UniRef90_Q8FDG5;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	3179953	3181794	.	+	.	ID=GCA000010485_03104_gene;locus_tag=GCA000010485_03104;gene=rpoD
contig_1	Pyrodigal	CDS	3179953	3181794	.	+	0	ID=GCA000010485_03104;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA000010485_03104;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0000345,GO:0003677,GO:0003700,GO:0005829,GO:0006352,GO:0006355,GO:0009408,GO:0016987,GO:0045892,GO:1903865,GO:2000142;gene=rpoD;Parent=GCA000010485_03104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03086,RefSeq:WP_000437380.1,SO:0001217,UniParc:UPI0000D50C82,UniRef:UniRef100_A0A061KMF2,UniRef:UniRef50_P00579,UniRef:UniRef90_P00579
contig_1	Pyrodigal	gene	3181872	3182378	.	-	.	ID=GCA000010485_03105_gene;locus_tag=GCA000010485_03105;gene=mug
contig_1	Pyrodigal	CDS	3181872	3182378	.	-	0	ID=GCA000010485_03105;Name=G/U mismatch-specific DNA glycosylase;locus_tag=GCA000010485_03105;product=G/U mismatch-specific DNA glycosylase;Dbxref=GO:0000700,GO:0003677,GO:0005737,GO:0006285,GO:0043739;gene=mug;Parent=GCA000010485_03105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3663,COG:L,RefSeq:WP_000228937.1,SO:0001217,UniParc:UPI000012F8E9,UniRef:UniRef100_P0A9H1,UniRef:UniRef50_P0A9H1,UniRef:UniRef90_P0A9H1;ec_number=3.2.2.28
contig_1	tRNAscan-SE	gene	3182503	3182578	.	+	.	ID=GCA000010485_03106_gene;locus_tag=GCA000010485_03106;gene=trnI
contig_1	tRNAscan-SE	tRNA	3182503	3182578	.	+	.	ID=GCA000010485_03106;Name=tRNA-Ile2(cat);locus_tag=GCA000010485_03106;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000010485_03106_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Pyrodigal	gene	3182632	3183396	.	-	.	ID=GCA000010485_03107_gene;locus_tag=GCA000010485_03107;gene=nfeF
contig_1	Pyrodigal	CDS	3182632	3183396	.	-	0	ID=GCA000010485_03107;Name=NADPH-dependent ferric chelate reductase;locus_tag=GCA000010485_03107;product=NADPH-dependent ferric chelate reductase;Dbxref=GO:0005829,GO:0010106,GO:0015891,GO:0033212,GO:0033214,GO:0050660,GO:0052851,GO:0071289,GO:0071949;gene=nfeF;Parent=GCA000010485_03107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001066494,COG:COG2375,COG:P,KEGG:K07229,RefSeq:WP_001066500.1,SO:0001217,UniParc:UPI0001C22D8C,UniRef:UniRef100_A0A061KIB5,UniRef:UniRef50_Q46871,UniRef:UniRef90_Q46871;ec_number=1.16.1.9
contig_1	Pyrodigal	gene	3183684	3184307	.	+	.	ID=GCA000010485_03108_gene;locus_tag=GCA000010485_03108;gene=nfeR
contig_1	Pyrodigal	CDS	3183684	3184307	.	+	0	ID=GCA000010485_03108;Name=DNA-binding transcriptional regulator NfeR;locus_tag=GCA000010485_03108;product=DNA-binding transcriptional regulator NfeR;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006974,GO:0045892,GO:0045893;gene=nfeR;Parent=GCA000010485_03108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000018003,COG:COG1695,COG:K,RefSeq:WP_000017999.1,SO:0001217,UniParc:UPI0001C22D8D,UniRef:UniRef100_A0A061YLG8,UniRef:UniRef50_P64588,UniRef:UniRef90_P64588
contig_1	Pyrodigal	gene	3184414	3185934	.	-	.	ID=GCA000010485_03109_gene;locus_tag=GCA000010485_03109;gene=aer
contig_1	Pyrodigal	CDS	3184414	3185934	.	-	0	ID=GCA000010485_03109;Name=aerotaxis sensor receptor Aer;locus_tag=GCA000010485_03109;product=aerotaxis sensor receptor Aer;Dbxref=GO:0004888,GO:0005886,GO:0006935,GO:0007165,GO:0042802,GO:0052131;gene=aer;Parent=GCA000010485_03109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000094721,COG:COG2202,COG:T,RefSeq:WP_000094714.1,SO:0001217,UniParc:UPI0001C22D8E,UniRef:UniRef100_A0A0C5EFB4,UniRef:UniRef50_P50466,UniRef:UniRef90_P50466
contig_1	Pyrodigal	gene	3186442	3187731	.	+	.	ID=GCA000010485_03110_gene;locus_tag=GCA000010485_03110;gene=ygjG
contig_1	Pyrodigal	CDS	3186442	3187731	.	+	0	ID=GCA000010485_03110;Name=putrescine aminotransferase;locus_tag=GCA000010485_03110;product=putrescine aminotransferase;Dbxref=GO:0009447,GO:0019161,GO:0019477,GO:0030170,GO:0033094,GO:0042802;gene=ygjG;Parent=GCA000010485_03110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,SO:0001217,UniParc:UPI00015C4D83,UniRef:UniRef100_A0A4T8QQJ3,UniRef:UniRef50_P42588,UniRef:UniRef90_P42588;ec_number=2.6.1.82
contig_1	Pyrodigal	gene	3187773	3188105	.	-	.	ID=GCA000010485_03111_gene;locus_tag=GCA000010485_03111;gene=ygjH
contig_1	Pyrodigal	CDS	3187773	3188105	.	-	0	ID=GCA000010485_03111;Name=tRNA-binding protein;locus_tag=GCA000010485_03111;product=tRNA-binding protein;Dbxref=GO:0000049,GO:0042803;gene=ygjH;Parent=GCA000010485_03111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,RefSeq:WP_000450588.1,SO:0001217,UniParc:UPI00000D06B0,UniRef:UniRef100_C3STV7,UniRef:UniRef50_P42589,UniRef:UniRef90_P42589
contig_1	Pyrodigal	gene	3188324	3189307	.	+	.	ID=GCA000010485_03112_gene;locus_tag=GCA000010485_03112;gene=ebgR
contig_1	Pyrodigal	CDS	3188324	3189307	.	+	0	ID=GCA000010485_03112;Name=transcriptional regulator EbgR;locus_tag=GCA000010485_03112;product=transcriptional regulator EbgR;gene=ebgR;Parent=GCA000010485_03112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,KEGG:K12113,RefSeq:WP_000212450.1,SO:0001217,UniParc:UPI0000D50C89,UniRef:UniRef100_A0A066ST65,UniRef:UniRef50_P06846,UniRef:UniRef90_A0A037YKQ0
contig_1	Pyrodigal	gene	3189491	3192583	.	+	.	ID=GCA000010485_03113_gene;locus_tag=GCA000010485_03113;gene=ebgA
contig_1	Pyrodigal	CDS	3189491	3192583	.	+	0	ID=GCA000010485_03113;Name=beta-galactosidase subunit alpha;locus_tag=GCA000010485_03113;product=beta-galactosidase subunit alpha;Dbxref=GO:0004565;gene=ebgA;Parent=GCA000010485_03113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01190,RefSeq:WP_001082927.1,SO:0001217,UniParc:UPI0001C22DC2,UniRef:UniRef100_A0A061YLH4,UniRef:UniRef50_P06864,UniRef:UniRef90_A0A1V2SV81;ec_number=3.2.1.23
contig_1	Pyrodigal	gene	3192580	3193029	.	+	.	ID=GCA000010485_03114_gene;locus_tag=GCA000010485_03114;gene=ebgC
contig_1	Pyrodigal	CDS	3192580	3193029	.	+	0	ID=GCA000010485_03114;Name=beta-galactosidase subunit beta;locus_tag=GCA000010485_03114;product=beta-galactosidase subunit beta;Dbxref=GO:0005829;gene=ebgC;Parent=GCA000010485_03114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001219954.1,SO:0001217,UniParc:UPI0000129B39,UniRef:UniRef100_P0AC73,UniRef:UniRef50_P0AC73,UniRef:UniRef90_P0AC73;ec_number=3.2.1.23
contig_1	Pyrodigal	gene	3193092	3194525	.	+	.	ID=GCA000010485_03115_gene;locus_tag=GCA000010485_03115;gene=ygjI
contig_1	Pyrodigal	CDS	3193092	3194525	.	+	0	ID=GCA000010485_03115;Name=Inner membrane transporter YgjI;locus_tag=GCA000010485_03115;product=Inner membrane transporter YgjI;Dbxref=GO:0005886,GO:0022857;gene=ygjI;Parent=GCA000010485_03115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001285446.1,SO:0001217,UniParc:UPI00000D06C0,UniRef:UniRef100_C3STU2,UniRef:UniRef50_P42590,UniRef:UniRef90_P42590
contig_1	Pyrodigal	gene	3194659	3195729	.	+	.	ID=GCA000010485_03116_gene;locus_tag=GCA000010485_03116;gene=ygjJ
contig_1	Pyrodigal	CDS	3194659	3195729	.	+	0	ID=GCA000010485_03116;Name=protein YgjJ;locus_tag=GCA000010485_03116;product=protein YgjJ;gene=ygjJ;Parent=GCA000010485_03116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000767671.1,SO:0001217,UniParc:UPI0001C22DC3,UniRef:UniRef100_A0A061YKS3,UniRef:UniRef50_P42591,UniRef:UniRef90_P42591
contig_1	Pyrodigal	gene	3195746	3198097	.	+	.	ID=GCA000010485_03117_gene;locus_tag=GCA000010485_03117;gene=ygjK
contig_1	Pyrodigal	CDS	3195746	3198097	.	+	0	ID=GCA000010485_03117;Name=alpha-glucosidase;locus_tag=GCA000010485_03117;product=alpha-glucosidase;Dbxref=GO:0004555,GO:0005991;gene=ygjK;Parent=GCA000010485_03117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1626,COG:G,KEGG:K03931,RefSeq:WP_000695431.1,SO:0001217,UniParc:UPI0001C22DC4,UniRef:UniRef100_A0A7I0KXZ5,UniRef:UniRef50_P42592,UniRef:UniRef90_A0A2R3NK36;ec_number=3.2.1.20
contig_1	Pyrodigal	gene	3198323	3200341	.	+	.	ID=GCA000010485_03118_gene;locus_tag=GCA000010485_03118;gene=fadH
contig_1	Pyrodigal	CDS	3198323	3200341	.	+	0	ID=GCA000010485_03118;Name=NADPH-dependent 2%2C4-dienoyl-CoA reductase;locus_tag=GCA000010485_03118;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;Dbxref=GO:0008670,GO:0010181,GO:0033543,GO:0046872,GO:0051539,GO:0071949;gene=fadH;Parent=GCA000010485_03118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000121433,COG:C,COG:COG1902,KEGG:K00219,RefSeq:WP_000121413.1,SO:0001217,UniParc:UPI0001C22DC5,UniRef:UniRef100_A0A066STI1,UniRef:UniRef50_P42593,UniRef:UniRef90_P42593;ec_number=1.3.1.34
contig_1	Pyrodigal	gene	3200386	3200802	.	-	.	ID=GCA000010485_03119_gene;locus_tag=GCA000010485_03119;gene=higA
contig_1	Pyrodigal	CDS	3200386	3200802	.	-	0	ID=GCA000010485_03119;Name=type II toxin-antitoxin system antitoxin HigA;locus_tag=GCA000010485_03119;product=type II toxin-antitoxin system antitoxin HigA;gene=higA;Parent=GCA000010485_03119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000560266,BlastRules:WP_003409886,BlastRules:WP_010920873,COG:COG5499,COG:V,RefSeq:WP_000560269.1,SO:0001217,UniParc:UPI0001C22DC6,UniRef:UniRef100_A0A061KMW9,UniRef:UniRef50_P67701,UniRef:UniRef90_Q32BN9
contig_1	Pyrodigal	gene	3200799	3201113	.	-	.	ID=GCA000010485_03120_gene;locus_tag=GCA000010485_03120;gene=higB
contig_1	Pyrodigal	CDS	3200799	3201113	.	-	0	ID=GCA000010485_03120;Name=type II toxin-antitoxin system toxin HigB;locus_tag=GCA000010485_03120;product=type II toxin-antitoxin system toxin HigB;Dbxref=GO:0003723,GO:0004519,GO:0110001;gene=higB;Parent=GCA000010485_03120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000550189,BlastRules:WP_010886136,BlastRules:WP_012640638,KEGG:K19166,RefSeq:WP_000550189.1,SO:0001217,UniParc:UPI0000047C85,UniRef:UniRef100_P64578,UniRef:UniRef50_P64578,UniRef:UniRef90_P64578;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3201398	3202534	.	-	.	ID=GCA000010485_03121_gene;locus_tag=GCA000010485_03121;gene=rlmG
contig_1	Pyrodigal	CDS	3201398	3202534	.	-	0	ID=GCA000010485_03121;Name=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;locus_tag=GCA000010485_03121;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;Dbxref=GO:0003676,GO:0005737,GO:0008990,GO:0031167,GO:0052916;gene=rlmG;Parent=GCA000010485_03121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_000018703.1,SO:0001217,UniParc:UPI0001887862,UniRef:UniRef100_A0A066SX35,UniRef:UniRef50_P42596,UniRef:UniRef90_P42596;ec_number=2.1.1.174
contig_1	Pyrodigal	gene	3202619	3203122	.	+	.	ID=GCA000010485_03122_gene;locus_tag=GCA000010485_03122;gene=ygjP
contig_1	Pyrodigal	CDS	3202619	3203122	.	+	0	ID=GCA000010485_03122;Name=UTP pyrophosphatase;locus_tag=GCA000010485_03122;product=UTP pyrophosphatase;Dbxref=GO:0000166,GO:0009117,GO:0036221;gene=ygjP;Parent=GCA000010485_03122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1451,COG:R,KEGG:K07043,RefSeq:WP_001295542.1,SO:0001217,UniParc:UPI00005EF887,UniRef:UniRef100_E2QED0,UniRef:UniRef50_P42597,UniRef:UniRef90_P42597;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	3203199	3203891	.	+	.	ID=GCA000010485_03123_gene;locus_tag=GCA000010485_03123
contig_1	Pyrodigal	CDS	3203199	3203891	.	+	0	ID=GCA000010485_03123;Name=DUF218 domain-containing protein;locus_tag=GCA000010485_03123;product=DUF218 domain-containing protein;Parent=GCA000010485_03123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03748,RefSeq:WP_000942551.1,SO:0001217,UniParc:UPI0001C22DC7,UniRef:UniRef100_A0A061KKJ2,UniRef:UniRef50_A0A4C7B0I8,UniRef:UniRef90_A0A4C7B0I8
contig_1	Pyrodigal	gene	3203970	3204956	.	+	.	ID=GCA000010485_03124_gene;locus_tag=GCA000010485_03124;gene=ygjR
contig_1	Pyrodigal	CDS	3203970	3204956	.	+	0	ID=GCA000010485_03124;Name=putative oxidoreductase YgjR;locus_tag=GCA000010485_03124;product=putative oxidoreductase YgjR;Dbxref=GO:0000166,GO:0016491;gene=ygjR;Parent=GCA000010485_03124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_001385498.1,SO:0001217,UniParc:UPI0001E8A05C,UniRef:UniRef100_A0A061YDE8,UniRef:UniRef50_Q8XAJ0,UniRef:UniRef90_P42599;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3205239	3206204	.	+	.	ID=GCA000010485_03125_gene;locus_tag=GCA000010485_03125;gene=alx
contig_1	Pyrodigal	CDS	3205239	3206204	.	+	0	ID=GCA000010485_03125;Name=TerC family membrane protein Alx;locus_tag=GCA000010485_03125;product=TerC family membrane protein Alx;Dbxref=GO:0005886;gene=alx;Parent=GCA000010485_03125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001098806,RefSeq:WP_001098827.1,SO:0001217,UniParc:UPI0000DAD016,UniRef:UniRef100_A0A061KMG9,UniRef:UniRef50_Q8XAJ0,UniRef:UniRef90_Q8XAJ0
contig_1	Pyrodigal	gene	3206528	3207772	.	+	.	ID=GCA000010485_03126_gene;locus_tag=GCA000010485_03126;gene=sstT
contig_1	Pyrodigal	CDS	3206528	3207772	.	+	0	ID=GCA000010485_03126;Name=serine/threonine transporter SstT;locus_tag=GCA000010485_03126;product=serine/threonine transporter SstT;Dbxref=GO:0005295,GO:0005886,GO:0015293,GO:0015826,GO:0016020,GO:0032329;gene=sstT;Parent=GCA000010485_03126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3633,COG:E,RefSeq:WP_000211388.1,SO:0001217,UniParc:UPI0001C22DC9,UniRef:UniRef100_A0A066SX30,UniRef:UniRef50_P0AGE4,UniRef:UniRef90_P0AGE4
contig_1	Pyrodigal	gene	3207776	3208327	.	-	.	ID=GCA000010485_03127_gene;locus_tag=GCA000010485_03127;gene=ygjV
contig_1	Pyrodigal	CDS	3207776	3208327	.	-	0	ID=GCA000010485_03127;Name=Inner membrane protein YgjV;locus_tag=GCA000010485_03127;product=Inner membrane protein YgjV;Dbxref=GO:0005886;gene=ygjV;Parent=GCA000010485_03127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000128143.1,SO:0001217,UniParc:UPI00000DF0B7,UniRef:UniRef100_E2QED5,UniRef:UniRef50_P42603,UniRef:UniRef90_P42603
contig_1	Pyrodigal	gene	3208410	3209897	.	-	.	ID=GCA000010485_03128_gene;locus_tag=GCA000010485_03128;gene=uxaA
contig_1	Pyrodigal	CDS	3208410	3209897	.	-	0	ID=GCA000010485_03128;Name=altronate dehydratase;locus_tag=GCA000010485_03128;product=altronate dehydratase;Dbxref=GO:0008198,GO:0008789,GO:0019698;gene=uxaA;Parent=GCA000010485_03128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001199390,COG:COG2721,COG:G,KEGG:K01685,RefSeq:WP_001199372.1,SO:0001217,UniParc:UPI00000DF0B8,UniRef:UniRef100_A0A066STH2,UniRef:UniRef50_P42604,UniRef:UniRef90_P42604;ec_number=4.2.1.7
contig_1	Pyrodigal	gene	3209912	3211324	.	-	.	ID=GCA000010485_03129_gene;locus_tag=GCA000010485_03129;gene=uxaC
contig_1	Pyrodigal	CDS	3209912	3211324	.	-	0	ID=GCA000010485_03129;Name=glucuronate isomerase;locus_tag=GCA000010485_03129;product=glucuronate isomerase;Dbxref=GO:0006064,GO:0008880,GO:0019698,GO:0042840;gene=uxaC;Parent=GCA000010485_03129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01812,RefSeq:WP_000187442.1,SO:0001217,UniParc:UPI0000137F17,UniRef:UniRef100_P0A8G3,UniRef:UniRef50_P0A8G3,UniRef:UniRef90_P0A8G3;ec_number=5.3.1.12
contig_1	Pyrodigal	gene	3211807	3213105	.	+	.	ID=GCA000010485_03130_gene;locus_tag=GCA000010485_03130;gene=exuT
contig_1	Pyrodigal	CDS	3211807	3213105	.	+	0	ID=GCA000010485_03130;Name=hexuronate transporter ExuT;locus_tag=GCA000010485_03130;product=hexuronate transporter ExuT;Dbxref=GO:0005886,GO:0015134,GO:0015736;gene=exuT;Parent=GCA000010485_03130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001226465,COG:COG2271,COG:G,RefSeq:WP_001298326.1,SO:0001217,UniParc:UPI0000DAD018,UniRef:UniRef100_E2QED8,UniRef:UniRef50_P0AA78,UniRef:UniRef90_P0AA78
contig_1	Pyrodigal	gene	3213235	3214011	.	+	.	ID=GCA000010485_03131_gene;locus_tag=GCA000010485_03131;gene=exuR
contig_1	Pyrodigal	CDS	3213235	3214011	.	+	0	ID=GCA000010485_03131;Name=transcriptional regulator ExuR;locus_tag=GCA000010485_03131;product=transcriptional regulator ExuR;Dbxref=GO:0003677,GO:0003700;gene=exuR;Parent=GCA000010485_03131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19775,RefSeq:WP_000406487.1,SO:0001217,UniParc:UPI00005EF87D,UniRef:UniRef100_E2QED9,UniRef:UniRef50_Q9X9E0,UniRef:UniRef90_P0ACL2
contig_1	Bakta	gene	3214257	3214334	.	+	.	ID=GCA000010485_03132_gene;locus_tag=GCA000010485_03132;inference=ab initio prediction:Bakta;gene=yqiM
contig_1	Bakta	CDS	3214257	3214334	.	+	0	ID=GCA000010485_03132;Name=Protein YqiM;locus_tag=GCA000010485_03132;product=Protein YqiM;gene=yqiM;Parent=GCA000010485_03132_gene;Note=SO:0001217,UniRef:UniRef50_P0DSG5,UniRef:UniRef90_P0DSG5
contig_1	Pyrodigal	gene	3214356	3215018	.	+	.	ID=GCA000010485_03133_gene;locus_tag=GCA000010485_03133;gene=yqjA
contig_1	Pyrodigal	CDS	3214356	3215018	.	+	0	ID=GCA000010485_03133;Name=Inner membrane protein YqjA;locus_tag=GCA000010485_03133;product=Inner membrane protein YqjA;Dbxref=GO:0005886;gene=yqjA;Parent=GCA000010485_03133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000422145.1,SO:0001217,UniParc:UPI0001C22DCA,UniRef:UniRef100_A0A3K0JPB8,UniRef:UniRef50_P0AA63,UniRef:UniRef90_P0AA63
contig_1	Pyrodigal	gene	3215022	3215405	.	+	.	ID=GCA000010485_03134_gene;locus_tag=GCA000010485_03134;gene=mzrA
contig_1	Pyrodigal	CDS	3215022	3215405	.	+	0	ID=GCA000010485_03134;Name=EnvZ/OmpR regulon moderator MzrA;locus_tag=GCA000010485_03134;product=EnvZ/OmpR regulon moderator MzrA;Dbxref=GO:0005886,GO:0016020,GO:0019901;gene=mzrA;Parent=GCA000010485_03134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001166764.1,SO:0001217,UniParc:UPI00000DF0BB,UniRef:UniRef100_E2QEE1,UniRef:UniRef50_P42615,UniRef:UniRef90_P42615
contig_1	Pyrodigal	gene	3215552	3215920	.	+	.	ID=GCA000010485_03135_gene;locus_tag=GCA000010485_03135;gene=yqjC
contig_1	Pyrodigal	CDS	3215552	3215920	.	+	0	ID=GCA000010485_03135;Name=Protein YqjC;locus_tag=GCA000010485_03135;product=Protein YqjC;gene=yqjC;Parent=GCA000010485_03135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295543.1,SO:0001217,UniParc:UPI000013BF23,UniRef:UniRef100_P42616,UniRef:UniRef50_P42616,UniRef:UniRef90_P42616
contig_1	Pyrodigal	gene	3215958	3216263	.	+	.	ID=GCA000010485_03136_gene;locus_tag=GCA000010485_03136;gene=yqjD
contig_1	Pyrodigal	CDS	3215958	3216263	.	+	0	ID=GCA000010485_03136;Name=putative protein YqjD;locus_tag=GCA000010485_03136;product=putative protein YqjD;Dbxref=GO:0005886,GO:0043022;gene=yqjD;Parent=GCA000010485_03136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4575,COG:J,RefSeq:WP_000031415.1,SO:0001217,UniParc:UPI0000047C93,UniRef:UniRef100_P64581,UniRef:UniRef50_P64581,UniRef:UniRef90_P64581
contig_1	Pyrodigal	gene	3216266	3216670	.	+	.	ID=GCA000010485_03137_gene;locus_tag=GCA000010485_03137;gene=yqjE
contig_1	Pyrodigal	CDS	3216266	3216670	.	+	0	ID=GCA000010485_03137;Name=Inner membrane protein YqjE;locus_tag=GCA000010485_03137;product=Inner membrane protein YqjE;Dbxref=GO:0005886;gene=yqjE;Parent=GCA000010485_03137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000785722.1,SO:0001217,UniParc:UPI0000047C94,UniRef:UniRef100_P64585,UniRef:UniRef50_P64585,UniRef:UniRef90_P64585
contig_1	Pyrodigal	gene	3216660	3216959	.	+	.	ID=GCA000010485_03138_gene;locus_tag=GCA000010485_03138;gene=yqjK
contig_1	Pyrodigal	CDS	3216660	3216959	.	+	0	ID=GCA000010485_03138;Name=putative protein YqjK;locus_tag=GCA000010485_03138;product=putative protein YqjK;Dbxref=GO:0005829;gene=yqjK;Parent=GCA000010485_03138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000096086.1,SO:0001217,UniParc:UPI00000D06E7,UniRef:UniRef100_C3STJ2,UniRef:UniRef50_Q47710,UniRef:UniRef90_Q47710
contig_1	Pyrodigal	gene	3217056	3217538	.	+	.	ID=GCA000010485_03139_gene;locus_tag=GCA000010485_03139;gene=yqjF
contig_1	Pyrodigal	CDS	3217056	3217538	.	+	0	ID=GCA000010485_03139;Name=Inner membrane protein YqjF;locus_tag=GCA000010485_03139;product=Inner membrane protein YqjF;Dbxref=GO:0005886;gene=yqjF;Parent=GCA000010485_03139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000E45192,UniRef:UniRef100_A0A1Y5BQM0,UniRef:UniRef50_P42619,UniRef:UniRef90_P42619
contig_1	Pyrodigal	gene	3217608	3218594	.	+	.	ID=GCA000010485_03140_gene;locus_tag=GCA000010485_03140;gene=yqjG
contig_1	Pyrodigal	CDS	3217608	3218594	.	+	0	ID=GCA000010485_03140;Name=glutathionyl-hydroquinone reductase YqjG;locus_tag=GCA000010485_03140;product=glutathionyl-hydroquinone reductase YqjG;Dbxref=GO:0004364,GO:0005737,GO:0016672,GO:0042803;gene=yqjG;Parent=GCA000010485_03140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000531213,COG:C,COG:COG0435,RefSeq:WP_000531173.1,SO:0001217,UniParc:UPI0001C22DCB,UniRef:UniRef100_A0A066T1K3,UniRef:UniRef50_P42620,UniRef:UniRef90_P42620;ec_number=1.8.5.7
contig_1	Pyrodigal	gene	3218877	3219245	.	+	.	ID=GCA000010485_03141_gene;locus_tag=GCA000010485_03141;gene=yhaH
contig_1	Pyrodigal	CDS	3218877	3219245	.	+	0	ID=GCA000010485_03141;Name=Inner membrane protein YhaH;locus_tag=GCA000010485_03141;product=Inner membrane protein YhaH;Dbxref=GO:0005886;gene=yhaH;Parent=GCA000010485_03141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_001314179.1,SO:0001217,UniParc:UPI0000DAD020,UniRef:UniRef100_E2QEE8,UniRef:UniRef50_P64590,UniRef:UniRef90_P64590
contig_1	Pyrodigal	gene	3219279	3220175	.	-	.	ID=GCA000010485_03142_gene;locus_tag=GCA000010485_03142;gene=yhaJ
contig_1	Pyrodigal	CDS	3219279	3220175	.	-	0	ID=GCA000010485_03142;Name=DNA-binding transcriptional regulator YhaJ;locus_tag=GCA000010485_03142;product=DNA-binding transcriptional regulator YhaJ;Dbxref=GO:0000976,GO:0001216,GO:0006355,GO:2000144;gene=yhaJ;Parent=GCA000010485_03142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001041009,COG:COG0583,COG:K,RefSeq:WP_001041010.1,SO:0001217,UniParc:UPI00000DF0BF,UniRef:UniRef100_E2QEE9,UniRef:UniRef50_P67661,UniRef:UniRef90_P67661
contig_1	Pyrodigal	gene	3220280	3220981	.	+	.	ID=GCA000010485_03143_gene;locus_tag=GCA000010485_03143;gene=yhaK
contig_1	Pyrodigal	CDS	3220280	3220981	.	+	0	ID=GCA000010485_03143;Name=Pirin-like protein YhaK;locus_tag=GCA000010485_03143;product=Pirin-like protein YhaK;Dbxref=GO:0005737;gene=yhaK;Parent=GCA000010485_03143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1741,COG:R,RefSeq:WP_000633597.1,SO:0001217,UniParc:UPI0001C22DCC,UniRef:UniRef100_A0A061YJR6,UniRef:UniRef50_P42624,UniRef:UniRef90_P42624
contig_1	Pyrodigal	gene	3221004	3221168	.	+	.	ID=GCA000010485_03144_gene;locus_tag=GCA000010485_03144;gene=yhaL
contig_1	Pyrodigal	CDS	3221004	3221168	.	+	0	ID=GCA000010485_03144;Name=putative protein YhaL;locus_tag=GCA000010485_03144;product=putative protein YhaL;gene=yhaL;Parent=GCA000010485_03144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295544.1,SO:0001217,UniParc:UPI0000DAD021,UniRef:UniRef100_C3STG2,UniRef:UniRef50_P42625,UniRef:UniRef90_P42625
contig_1	Pyrodigal	gene	3221229	3222539	.	-	.	ID=GCA000010485_03145_gene;locus_tag=GCA000010485_03145;gene=yhaM
contig_1	Pyrodigal	CDS	3221229	3222539	.	-	0	ID=GCA000010485_03145;Name=UPF0597 protein YhaM;locus_tag=GCA000010485_03145;product=UPF0597 protein YhaM;Dbxref=GO:0019450,GO:0080146;gene=yhaM;Parent=GCA000010485_03145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3681,COG:E,RefSeq:WP_000460528.1,SO:0001217,UniParc:UPI0001C22DCD,UniRef:UniRef100_A0A061YLK1,UniRef:UniRef50_P42626,UniRef:UniRef90_P42626
contig_1	Pyrodigal	gene	3222567	3223898	.	-	.	ID=GCA000010485_03146_gene;locus_tag=GCA000010485_03146;gene=dlsT
contig_1	Pyrodigal	CDS	3222567	3223898	.	-	0	ID=GCA000010485_03146;Name=putative serine transporter;locus_tag=GCA000010485_03146;product=putative serine transporter;Dbxref=GO:0005886,GO:0009093,GO:0033229,GO:1903712;gene=dlsT;Parent=GCA000010485_03146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K26604,RefSeq:WP_000401581.1,SO:0001217,UniParc:UPI000187BF87,UniRef:UniRef100_A0A1U9TUK3,UniRef:UniRef50_P42628,UniRef:UniRef90_P42628
contig_1	Pyrodigal	gene	3224176	3225540	.	-	.	ID=GCA000010485_03147_gene;locus_tag=GCA000010485_03147;gene=tdcG
contig_1	Pyrodigal	CDS	3224176	3225540	.	-	0	ID=GCA000010485_03147;Name=L-serine ammonia-lyase;locus_tag=GCA000010485_03147;product=L-serine ammonia-lyase;Dbxref=GO:0003941,GO:0006094,GO:0009063,GO:0046872,GO:0051539,GO:0070689;gene=tdcG;Parent=GCA000010485_03147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000622122.1,SO:0001217,UniParc:UPI00005EF873,UniRef:UniRef100_A0A067HM27,UniRef:UniRef50_P42630,UniRef:UniRef90_P42630;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	3225612	3226001	.	-	.	ID=GCA000010485_03148_gene;locus_tag=GCA000010485_03148;gene=tdcF
contig_1	Pyrodigal	CDS	3225612	3226001	.	-	0	ID=GCA000010485_03148;Name=enamine/imine deaminase;locus_tag=GCA000010485_03148;product=enamine/imine deaminase;Dbxref=GO:0005829,GO:0006566,GO:0019239,GO:0070689;gene=tdcF;Parent=GCA000010485_03148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000719990.1,SO:0001217,UniParc:UPI0000136B4A,UniRef:UniRef100_P0AGL2,UniRef:UniRef50_P0AGL2,UniRef:UniRef90_P0AGL2;ec_number=3.5.4.-
contig_1	Pyrodigal	gene	3226015	3228309	.	-	.	ID=GCA000010485_03149_gene;locus_tag=GCA000010485_03149;gene=tdcE
contig_1	Pyrodigal	CDS	3226015	3228309	.	-	0	ID=GCA000010485_03149;Name=2-ketobutyrate formate-lyase/pyruvate formate-lyase;locus_tag=GCA000010485_03149;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0008861,GO:0016020,GO:0043875,GO:0070689;gene=tdcE;Parent=GCA000010485_03149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000861734,COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_000861714.1,SO:0001217,UniParc:UPI0001C22DCE,UniRef:UniRef100_A0A066SPQ9,UniRef:UniRef50_P09373,UniRef:UniRef90_P42632;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	3228343	3229551	.	-	.	ID=GCA000010485_03150_gene;locus_tag=GCA000010485_03150;gene=tdcD
contig_1	Pyrodigal	CDS	3228343	3229551	.	-	0	ID=GCA000010485_03150;Name=propionate kinase;locus_tag=GCA000010485_03150;product=propionate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006082,GO:0006083,GO:0006567,GO:0008776,GO:0008980,GO:0016301,GO:0016310,GO:0019665,GO:0046872,GO:0070689;gene=tdcD;Parent=GCA000010485_03150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00932,RefSeq:WP_001296431.1,SO:0001217,UniParc:UPI0001C22C00,UniRef:UniRef100_A0A066STP3,UniRef:UniRef50_P11868,UniRef:UniRef90_P11868;ec_number=2.7.2.15
contig_1	Pyrodigal	gene	3229577	3230908	.	-	.	ID=GCA000010485_03151_gene;locus_tag=GCA000010485_03151;gene=tdcC
contig_1	Pyrodigal	CDS	3229577	3230908	.	-	0	ID=GCA000010485_03151;Name=threonine/serine transporter TdcC;locus_tag=GCA000010485_03151;product=threonine/serine transporter TdcC;Dbxref=GO:0005886,GO:0015194,GO:0015293,GO:0015565;gene=tdcC;Parent=GCA000010485_03151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03838,RefSeq:WP_000107720.1,SO:0001217,UniParc:UPI00000DF0C5,UniRef:UniRef100_B7UJ20,UniRef:UniRef50_P0AAD8,UniRef:UniRef90_P0AAD8
contig_1	Pyrodigal	gene	3230930	3231919	.	-	.	ID=GCA000010485_03152_gene;locus_tag=GCA000010485_03152;gene=tdcB
contig_1	Pyrodigal	CDS	3230930	3231919	.	-	0	ID=GCA000010485_03152;Name=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;locus_tag=GCA000010485_03152;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;Dbxref=GO:0000166,GO:0003941,GO:0004794,GO:0006565,GO:0006567,GO:0009097,GO:0030170,GO:0070689;gene=tdcB;Parent=GCA000010485_03152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000548347.1,SO:0001217,UniParc:UPI0000136D50,UniRef:UniRef100_P0AGF6,UniRef:UniRef50_P0AGF6,UniRef:UniRef90_P0AGF6;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	3232018	3232956	.	-	.	ID=GCA000010485_03153_gene;locus_tag=GCA000010485_03153;gene=tdcA
contig_1	Pyrodigal	CDS	3232018	3232956	.	-	0	ID=GCA000010485_03153;Name=transcriptional regulator TdcA;locus_tag=GCA000010485_03153;product=transcriptional regulator TdcA;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0070689;gene=tdcA;Parent=GCA000010485_03153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K07592,RefSeq:WP_000104202.1,SO:0001217,UniParc:UPI0001C22C01,UniRef:UniRef100_A0A061KHS9,UniRef:UniRef50_P0ACQ7,UniRef:UniRef90_P0ACQ7
contig_1	Infernal	gene	3234055	3234431	.	-	.	ID=GCA000010485_03154_gene;locus_tag=GCA000010485_03154;gene=RNaseP_bact_a
contig_1	Infernal	ncRNA	3234055	3234431	3.4e-41	-	.	ID=GCA000010485_03154;Name=Bacterial RNase P class A;locus_tag=GCA000010485_03154;product=Bacterial RNase P class A;Dbxref=RFAM:RF00010;Parent=GCA000010485_03154_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00010
contig_1	Pyrodigal	gene	3234464	3235609	.	-	.	ID=GCA000010485_03155_gene;locus_tag=GCA000010485_03155;gene=garK
contig_1	Pyrodigal	CDS	3234464	3235609	.	-	0	ID=GCA000010485_03155;Name=glycerate 2-kinase;locus_tag=GCA000010485_03155;product=glycerate 2-kinase;Dbxref=GO:0005524,GO:0008887,GO:0031388,GO:0042838,GO:0043798,GO:0046392;gene=garK;Parent=GCA000010485_03155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_001296434.1,SO:0001217,UniParc:UPI00016088F0,UniRef:UniRef100_E2QEG2,UniRef:UniRef50_P23524,UniRef:UniRef90_P23524;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	3235706	3236596	.	-	.	ID=GCA000010485_03156_gene;locus_tag=GCA000010485_03156;gene=garR
contig_1	Pyrodigal	CDS	3235706	3236596	.	-	0	ID=GCA000010485_03156;Name=2-hydroxy-3-oxopropionate reductase;locus_tag=GCA000010485_03156;product=2-hydroxy-3-oxopropionate reductase;Dbxref=GO:0008679,GO:0042838,GO:0046392,GO:0046487,GO:0050661,GO:0051287;gene=garR;Parent=GCA000010485_03156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2084,COG:I,RefSeq:WP_001350452.1,SO:0001217,UniParc:UPI0001E17CA3,UniRef:UniRef100_A0A061YP03,UniRef:UniRef50_P0ABQ2,UniRef:UniRef90_P0ABQ2;ec_number=1.1.1.60
contig_1	Pyrodigal	gene	3236626	3237396	.	-	.	ID=GCA000010485_03157_gene;locus_tag=GCA000010485_03157;gene=garL
contig_1	Pyrodigal	CDS	3236626	3237396	.	-	0	ID=GCA000010485_03157;Name=2-dehydro-3-deoxyglucarate aldolase;locus_tag=GCA000010485_03157;product=2-dehydro-3-deoxyglucarate aldolase;Dbxref=GO:0000287,GO:0005737,GO:0008672,GO:0019394,GO:0042838,GO:0046392;gene=garL;Parent=GCA000010485_03157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3836,COG:G,RefSeq:WP_001058227.1,SO:0001217,UniParc:UPI00000D06FD,UniRef:UniRef100_A7ZS18,UniRef:UniRef50_P23522,UniRef:UniRef90_P23522;ec_number=4.1.2.20
contig_1	Pyrodigal	gene	3237412	3238746	.	-	.	ID=GCA000010485_03158_gene;locus_tag=GCA000010485_03158;gene=garP
contig_1	Pyrodigal	CDS	3237412	3238746	.	-	0	ID=GCA000010485_03158;Name=galactarate/glucarate/glycerate transporter GarP;locus_tag=GCA000010485_03158;product=galactarate/glucarate/glycerate transporter GarP;Dbxref=GO:0005886,GO:0019580,GO:0022857,GO:0042836,GO:0098656;gene=garP;Parent=GCA000010485_03158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000599636,KEGG:K12299,RefSeq:WP_000599651.1,SO:0001217,UniParc:UPI00016A044E,UniRef:UniRef100_A0A023LF32,UniRef:UniRef50_P0AA80,UniRef:UniRef90_P0AA80
contig_1	Pyrodigal	gene	3239121	3240692	.	+	.	ID=GCA000010485_03159_gene;locus_tag=GCA000010485_03159;gene=garD
contig_1	Pyrodigal	CDS	3239121	3240692	.	+	0	ID=GCA000010485_03159;Name=galactarate dehydratase;locus_tag=GCA000010485_03159;product=galactarate dehydratase;Dbxref=GO:0008198,GO:0008867,GO:0019698,GO:0042803,GO:0046392;gene=garD;Parent=GCA000010485_03159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2721,COG:G,KEGG:K01708,RefSeq:WP_001273763.1,SO:0001217,UniParc:UPI0000673E46,UniRef:UniRef100_A0A066SYG6,UniRef:UniRef50_P39829,UniRef:UniRef90_P39829;ec_number=4.2.1.42
contig_1	Pyrodigal	gene	3240841	3241176	.	+	.	ID=GCA000010485_03160_gene;locus_tag=GCA000010485_03160;gene=prlF
contig_1	Pyrodigal	CDS	3240841	3241176	.	+	0	ID=GCA000010485_03160;Name=type II toxin-antitoxin system antitoxin PrlF;locus_tag=GCA000010485_03160;product=type II toxin-antitoxin system antitoxin PrlF;Dbxref=GO:0001558,GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0019899,GO:0040008,GO:0042802,GO:0044010,GO:0045892,GO:0097351,GO:0110001;gene=prlF;Parent=GCA000010485_03160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001307405,KEGG:K19156,RefSeq:WP_001296435.1,SO:0001217,UniParc:UPI00000DF0CD,UniRef:UniRef100_Q8FDB5,UniRef:UniRef50_P15373,UniRef:UniRef90_P15373
contig_1	Pyrodigal	gene	3241176	3241640	.	+	.	ID=GCA000010485_03161_gene;locus_tag=GCA000010485_03161;gene=yhaV
contig_1	Pyrodigal	CDS	3241176	3241640	.	+	0	ID=GCA000010485_03161;Name=type II toxin-antitoxin system ribonuclease toxin YhaV;locus_tag=GCA000010485_03161;product=type II toxin-antitoxin system ribonuclease toxin YhaV;Dbxref=GO:0004521,GO:0004540,GO:0006355,GO:0006402,GO:0030308,GO:0040008,GO:0042803,GO:0043023,GO:0044010,GO:0110001;gene=yhaV;Parent=GCA000010485_03161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000347273,KEGG:K19155,RefSeq:WP_000347251.1,SO:0001217,UniParc:UPI00005F17D5,UniRef:UniRef100_J7R9C0,UniRef:UniRef50_P64594,UniRef:UniRef90_P64594;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3241695	3242504	.	-	.	ID=GCA000010485_03162_gene;locus_tag=GCA000010485_03162;gene=agaR
contig_1	Pyrodigal	CDS	3241695	3242504	.	-	0	ID=GCA000010485_03162;Name=aga operon transcriptional regulator AgaR;locus_tag=GCA000010485_03162;product=aga operon transcriptional regulator AgaR;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=agaR;Parent=GCA000010485_03162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000072187,RefSeq:WP_000072187.1,SO:0001217,UniParc:UPI00001256AF,UniRef:UniRef100_P0ACK2,UniRef:UniRef50_P0ACK2,UniRef:UniRef90_P0ACK2
contig_1	Pyrodigal	gene	3242753	3244033	.	+	.	ID=GCA000010485_03163_gene;locus_tag=GCA000010485_03163;gene=kbaZ
contig_1	Pyrodigal	CDS	3242753	3244033	.	+	0	ID=GCA000010485_03163;Name=tagatose-bisphosphate aldolase subunit KbaZ;locus_tag=GCA000010485_03163;product=tagatose-bisphosphate aldolase subunit KbaZ;Dbxref=GO:0005886,GO:0005975,GO:0009401,GO:2001059;gene=kbaZ;Parent=GCA000010485_03163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16371,RefSeq:WP_000681950.1,SO:0001217,UniParc:UPI0001C22C04,UniRef:UniRef100_A0A066SXQ5,UniRef:UniRef50_P0C8K1,UniRef:UniRef90_P0C8K1;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	3244056	3244529	.	+	.	ID=GCA000010485_03164_gene;locus_tag=GCA000010485_03164;gene=agaV
contig_1	Pyrodigal	CDS	3244056	3244529	.	+	0	ID=GCA000010485_03164;Name=PTS N-acetylgalactosamine transporter subunit IIB;locus_tag=GCA000010485_03164;product=PTS N-acetylgalactosamine transporter subunit IIB;Dbxref=GO:0005737,GO:0008982,GO:0009401,GO:0016301;gene=agaV;Parent=GCA000010485_03164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3444,COG:G,RefSeq:WP_001295547.1,SO:0001217,UniParc:UPI00005EF1DF,UniRef:UniRef100_C3ST55,UniRef:UniRef50_P42904,UniRef:UniRef90_P42904;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	3244540	3245319	.	+	.	ID=GCA000010485_03165_gene;locus_tag=GCA000010485_03165;gene=agaW
contig_1	Pyrodigal	CDS	3244540	3245319	.	+	0	ID=GCA000010485_03165;Name=PTS N-acetylgalactosamine transporter subunit IIC;locus_tag=GCA000010485_03165;product=PTS N-acetylgalactosamine transporter subunit IIC;gene=agaW;Parent=GCA000010485_03165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02746,RefSeq:WP_000406214.1,SO:0001217,UniParc:UPI00000D070A,UniRef:UniRef100_A0A377AAV3,UniRef:UniRef50_A0A377AAV3,UniRef:UniRef90_A0A377AAV3
contig_1	Pyrodigal	gene	3245309	3246187	.	+	.	ID=GCA000010485_03166_gene;locus_tag=GCA000010485_03166;gene=agaE
contig_1	Pyrodigal	CDS	3245309	3246187	.	+	0	ID=GCA000010485_03166;Name=PTS N-acetylgalactosamine transporter subunit IID;locus_tag=GCA000010485_03166;product=PTS N-acetylgalactosamine transporter subunit IID;gene=agaE;Parent=GCA000010485_03166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3716,COG:G,RefSeq:WP_001295548.1,SO:0001217,UniParc:UPI00000D070B,UniRef:UniRef100_A0AA40MXK1,UniRef:UniRef50_A0A0D7LVG3,UniRef:UniRef90_A0A0D7LVG3
contig_1	Pyrodigal	gene	3246205	3246639	.	+	.	ID=GCA000010485_03167_gene;locus_tag=GCA000010485_03167;gene=agaF
contig_1	Pyrodigal	CDS	3246205	3246639	.	+	0	ID=GCA000010485_03167;Name=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;locus_tag=GCA000010485_03167;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;gene=agaF;Parent=GCA000010485_03167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000948824.1,SO:0001217,UniParc:UPI00000D070D,UniRef:UniRef100_A0A3P5DUL2,UniRef:UniRef50_A0A3P5DUL2,UniRef:UniRef90_A0A3P5DUL2
contig_1	Pyrodigal	gene	3246636	3247769	.	+	.	ID=GCA000010485_03168_gene;locus_tag=GCA000010485_03168;gene=nagA
contig_1	Pyrodigal	CDS	3246636	3247769	.	+	0	ID=GCA000010485_03168;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000010485_03168;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0006046,GO:0008448,GO:0046872,GO:0047419;gene=nagA;Parent=GCA000010485_03168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02079,RefSeq:WP_001296436.1,SO:0001217,UniParc:UPI00021858D5,UniRef:UniRef100_A0A066SXQ9,UniRef:UniRef50_Q8XAC3,UniRef:UniRef90_Q8XAC3;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	3248119	3249273	.	+	.	ID=GCA000010485_03169_gene;locus_tag=GCA000010485_03169;gene=agaS
contig_1	Pyrodigal	CDS	3248119	3249273	.	+	0	ID=GCA000010485_03169;Name=D-galactosamine-6-phosphate deaminase AgaS;locus_tag=GCA000010485_03169;product=D-galactosamine-6-phosphate deaminase AgaS;Dbxref=GO:0005886,GO:0009401,GO:0016787,GO:0016853,GO:0097367,GO:1901135;gene=agaS;Parent=GCA000010485_03169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02082,RefSeq:WP_001114864.1,SO:0001217,UniParc:UPI0001C22C06,UniRef:UniRef100_A0A066SYH5,UniRef:UniRef50_Q8XAC2,UniRef:UniRef90_Q8XAC2;ec_number=3.5.99.-
contig_1	Pyrodigal	gene	3249286	3250146	.	+	.	ID=GCA000010485_03170_gene;locus_tag=GCA000010485_03170;gene=kbaY
contig_1	Pyrodigal	CDS	3249286	3250146	.	+	0	ID=GCA000010485_03170;Name=tagatose-bisphosphate aldolase subunit KbaY;locus_tag=GCA000010485_03170;product=tagatose-bisphosphate aldolase subunit KbaY;Dbxref=GO:0005829,GO:0005975,GO:0008270,GO:0009025,GO:2001059;gene=kbaY;Parent=GCA000010485_03170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000022771.1,SO:0001217,UniParc:UPI0001C22C07,UniRef:UniRef100_A0A066SQ35,UniRef:UniRef50_P0AB74,UniRef:UniRef90_P0AB74;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	3250313	3250789	.	+	.	ID=GCA000010485_03171_gene;locus_tag=GCA000010485_03171;gene=agaB
contig_1	Pyrodigal	CDS	3250313	3250789	.	+	0	ID=GCA000010485_03171;Name=PTS galactosamine transporter subunit IIB;locus_tag=GCA000010485_03171;product=PTS galactosamine transporter subunit IIB;Dbxref=GO:0005737,GO:0008982,GO:0009401,GO:0016301;gene=agaB;Parent=GCA000010485_03171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10984,RefSeq:WP_000098026.1,SO:0001217,UniParc:UPI0001C22C08,UniRef:UniRef100_A0A066SPT5,UniRef:UniRef50_P42909,UniRef:UniRef90_P42909;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	3250828	3251631	.	+	.	ID=GCA000010485_03172_gene;locus_tag=GCA000010485_03172;gene=agaC
contig_1	Pyrodigal	CDS	3250828	3251631	.	+	0	ID=GCA000010485_03172;Name=PTS galactosamine transporter subunit IIC;locus_tag=GCA000010485_03172;product=PTS galactosamine transporter subunit IIC;Dbxref=GO:0005886,GO:0009401;gene=agaC;Parent=GCA000010485_03172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10985,RefSeq:WP_000544489.1,SO:0001217,UniParc:UPI000013298E,UniRef:UniRef100_P42910,UniRef:UniRef50_P42910,UniRef:UniRef90_P42910
contig_1	Pyrodigal	gene	3251621	3252412	.	+	.	ID=GCA000010485_03173_gene;locus_tag=GCA000010485_03173;gene=agaD
contig_1	Pyrodigal	CDS	3251621	3252412	.	+	0	ID=GCA000010485_03173;Name=PTS galactosamine transporter subunit IID;locus_tag=GCA000010485_03173;product=PTS galactosamine transporter subunit IID;Dbxref=GO:0005886,GO:0009401;gene=agaD;Parent=GCA000010485_03173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3716,COG:G,KEGG:K10986,RefSeq:WP_000534335.1,SO:0001217,UniParc:UPI0001C22C09,UniRef:UniRef100_A0A7I0KXT3,UniRef:UniRef50_P42911,UniRef:UniRef90_P42911
contig_1	Pyrodigal	gene	3252467	3253180	.	+	.	ID=GCA000010485_03174_gene;locus_tag=GCA000010485_03174
contig_1	Pyrodigal	CDS	3252467	3253180	.	+	0	ID=GCA000010485_03174;Name=galactosamine-6-phosphate isomerase;locus_tag=GCA000010485_03174;product=galactosamine-6-phosphate isomerase;Parent=GCA000010485_03174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P42912,UniRef:UniRef90_W1F3B3
contig_1	Pyrodigal	gene	3253230	3254093	.	-	.	ID=GCA000010485_03175_gene;locus_tag=GCA000010485_03175;gene=rsmI
contig_1	Pyrodigal	CDS	3253230	3254093	.	-	0	ID=GCA000010485_03175;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA000010485_03175;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0042803,GO:0070677;gene=rsmI;Parent=GCA000010485_03175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0313,COG:J,KEGG:K07056,RefSeq:WP_000809258.1,SO:0001217,UniParc:UPI0001888E50,UniRef:UniRef100_E2QEI2,UniRef:UniRef50_P67087,UniRef:UniRef90_P67087;ec_number=2.1.1.198
contig_1	Pyrodigal	gene	3254158	3256194	.	+	.	ID=GCA000010485_03176_gene;locus_tag=GCA000010485_03176;gene=lpoA
contig_1	Pyrodigal	CDS	3254158	3256194	.	+	0	ID=GCA000010485_03176;Name=penicillin-binding protein activator LpoA;locus_tag=GCA000010485_03176;product=penicillin-binding protein activator LpoA;Dbxref=GO:0004553,GO:0008360,GO:0009252,GO:0009279,GO:0019899,GO:0030234,GO:0031241,GO:0042597;gene=lpoA;Parent=GCA000010485_03176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000249104,RefSeq:WP_000249175.1,SO:0001217,UniParc:UPI0001C22C0B,UniRef:UniRef100_A0A061KDP5,UniRef:UniRef50_P45464,UniRef:UniRef90_P45464
contig_1	Pyrodigal	gene	3256152	3256547	.	+	.	ID=GCA000010485_03177_gene;locus_tag=GCA000010485_03177;gene=yraN
contig_1	Pyrodigal	CDS	3256152	3256547	.	+	0	ID=GCA000010485_03177;Name=YraN family protein;locus_tag=GCA000010485_03177;product=YraN family protein;Dbxref=GO:0003676,GO:0004518;gene=yraN;Parent=GCA000010485_03177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0792,COG:L,KEGG:K07460,RefSeq:WP_000246833.1,SO:0001217,UniParc:UPI000013BF98,UniRef:UniRef100_B7MB69,UniRef:UniRef50_P45465,UniRef:UniRef90_P45465
contig_1	Pyrodigal	gene	3256567	3257157	.	+	.	ID=GCA000010485_03178_gene;locus_tag=GCA000010485_03178;gene=diaA
contig_1	Pyrodigal	CDS	3256567	3257157	.	+	0	ID=GCA000010485_03178;Name=DnaA initiator-associating protein DiaA;locus_tag=GCA000010485_03178;product=DnaA initiator-associating protein DiaA;Dbxref=GO:0006260,GO:0032298,GO:0042802,GO:0042803,GO:0097367,GO:1901135,GO:1990102;gene=diaA;Parent=GCA000010485_03178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0279,COG:G,KEGG:K12961,RefSeq:WP_001158035.1,SO:0001217,UniParc:UPI00000DF0D9,UniRef:UniRef100_A7ZS45,UniRef:UniRef50_P66817,UniRef:UniRef90_P66817
contig_1	Pyrodigal	gene	3257167	3257742	.	+	.	ID=GCA000010485_03179_gene;locus_tag=GCA000010485_03179;gene=dolP
contig_1	Pyrodigal	CDS	3257167	3257742	.	+	0	ID=GCA000010485_03179;Name=division/outer membrane stress-associated lipid-binding lipoprotein;locus_tag=GCA000010485_03179;product=division/outer membrane stress-associated lipid-binding lipoprotein;Dbxref=GO:0006970,GO:0009279,GO:0030288,GO:0032153;gene=dolP;Parent=GCA000010485_03179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2823,COG:M,KEGG:K04065,RefSeq:WP_000646033.1,SO:0001217,UniParc:UPI0000000D1E,UniRef:UniRef100_P64596,UniRef:UniRef50_P64596,UniRef:UniRef90_P64596
contig_1	Pyrodigal	gene	3257855	3258895	.	-	.	ID=GCA000010485_03180_gene;locus_tag=GCA000010485_03180;gene=yraQ
contig_1	Pyrodigal	CDS	3257855	3258895	.	-	0	ID=GCA000010485_03180;Name=UPF0718 protein YraQ;locus_tag=GCA000010485_03180;product=UPF0718 protein YraQ;Dbxref=GO:0005886;gene=yraQ;Parent=GCA000010485_03180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07089,RefSeq:WP_000147602.1,SO:0001217,UniParc:UPI0001C22C0C,UniRef:UniRef100_A0A061YKL2,UniRef:UniRef50_P45468,UniRef:UniRef90_P45468
contig_1	Pyrodigal	gene	3258968	3259603	.	-	.	ID=GCA000010485_03181_gene;locus_tag=GCA000010485_03181;gene=yraR
contig_1	Pyrodigal	CDS	3258968	3259603	.	-	0	ID=GCA000010485_03181;Name=Putative NAD(P)-binding protein YraR;locus_tag=GCA000010485_03181;product=Putative NAD(P)-binding protein YraR;Dbxref=GO:0016620,GO:0051287;gene=yraR;Parent=GCA000010485_03181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,KEGG:K17290,RefSeq:WP_001296438.1,SO:0001217,UniParc:UPI0001C22C0D,UniRef:UniRef100_A0A066SPU0,UniRef:UniRef50_P45469,UniRef:UniRef90_P45469;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3259731	3260249	.	+	.	ID=GCA000010485_03182_gene;locus_tag=GCA000010485_03182;gene=yhbO
contig_1	Pyrodigal	CDS	3259731	3260249	.	+	0	ID=GCA000010485_03182;Name=protein/nucleic acid deglycase;locus_tag=GCA000010485_03182;product=protein/nucleic acid deglycase;Dbxref=GO:0005829,GO:0006281,GO:0006979,GO:0009268,GO:0009408,GO:0009411,GO:0019172,GO:0030091,GO:0036524,GO:0042802,GO:0106044;gene=yhbO;Parent=GCA000010485_03182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000037608,COG:COG0693,COG:V,RefSeq:WP_001296439.1,SO:0001217,UniParc:UPI0001C22C0E,UniRef:UniRef100_A0A066STS1,UniRef:UniRef50_P45470,UniRef:UniRef90_P45470;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	3260229	3260672	.	-	.	ID=GCA000010485_03183_gene;locus_tag=GCA000010485_03183;gene=yhbP
contig_1	Pyrodigal	CDS	3260229	3260672	.	-	0	ID=GCA000010485_03183;Name=YhbP family protein;locus_tag=GCA000010485_03183;product=YhbP family protein;Dbxref=GO:0005829;gene=yhbP;Parent=GCA000010485_03183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3787,COG:S,KEGG:K09979,RefSeq:WP_000449450.1,SO:0001217,UniParc:UPI0000D50CA3,UniRef:UniRef100_B7MB75,UniRef:UniRef50_P67762,UniRef:UniRef90_P67762
contig_1	Pyrodigal	gene	3260723	3261025	.	+	.	ID=GCA000010485_03184_gene;locus_tag=GCA000010485_03184;gene=yhbQ
contig_1	Pyrodigal	CDS	3260723	3261025	.	+	0	ID=GCA000010485_03184;Name=DNA damage response exodeoxyribonuclease YhbQ;locus_tag=GCA000010485_03184;product=DNA damage response exodeoxyribonuclease YhbQ;Dbxref=GO:0004520,GO:0006974,GO:0008296;gene=yhbQ;Parent=GCA000010485_03184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000189333,COG:COG2827,COG:L,RefSeq:WP_000189327.1,SO:0001217,UniParc:UPI0001C22C0F,UniRef:UniRef100_A0A7I0KXX3,UniRef:UniRef50_P45472,UniRef:UniRef90_P45472;ec_number=3.1.11.1
contig_1	Pyrodigal	gene	3261012	3261515	.	-	.	ID=GCA000010485_03185_gene;locus_tag=GCA000010485_03185;gene=yhbS
contig_1	Pyrodigal	CDS	3261012	3261515	.	-	0	ID=GCA000010485_03185;Name=putative N-acetyltransferase YhbS;locus_tag=GCA000010485_03185;product=putative N-acetyltransferase YhbS;Dbxref=GO:0005829,GO:0016747;gene=yhbS;Parent=GCA000010485_03185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_000908548.1,SO:0001217,UniParc:UPI0001C22C10,UniRef:UniRef100_A0A066SQ50,UniRef:UniRef50_P63417,UniRef:UniRef90_P63417;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	3261509	3262033	.	-	.	ID=GCA000010485_03186_gene;locus_tag=GCA000010485_03186;gene=ubiT
contig_1	Pyrodigal	CDS	3261509	3262033	.	-	0	ID=GCA000010485_03186;Name=Ubiquinone biosynthesis accessory factor UbiT;locus_tag=GCA000010485_03186;product=Ubiquinone biosynthesis accessory factor UbiT;Dbxref=GO:0005829,GO:0032150;gene=ubiT;Parent=GCA000010485_03186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3154,COG:H,KEGG:K24843,RefSeq:WP_001295552.1,SO:0001217,UniParc:UPI000013B1C8,UniRef:UniRef100_P64599,UniRef:UniRef50_P64599,UniRef:UniRef90_P64599
contig_1	Pyrodigal	gene	3262242	3263237	.	+	.	ID=GCA000010485_03187_gene;locus_tag=GCA000010485_03187;gene=ubiU
contig_1	Pyrodigal	CDS	3262242	3263237	.	+	0	ID=GCA000010485_03187;Name=Ubiquinone biosynthesis protein UbiU;locus_tag=GCA000010485_03187;product=Ubiquinone biosynthesis protein UbiU;Dbxref=GO:0032150,GO:0046872,GO:0051539;gene=ubiU;Parent=GCA000010485_03187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,RefSeq:WP_001296441.1,SO:0001217,UniParc:UPI0001C22C11,UniRef:UniRef100_A0A066SXS5,UniRef:UniRef50_P45527,UniRef:UniRef90_P45527
contig_1	Pyrodigal	gene	3263246	3264124	.	+	.	ID=GCA000010485_03188_gene;locus_tag=GCA000010485_03188;gene=rlhA
contig_1	Pyrodigal	CDS	3263246	3264124	.	+	0	ID=GCA000010485_03188;Name=U32 family peptidase;locus_tag=GCA000010485_03188;product=U32 family peptidase;Dbxref=GO:0006744;gene=rlhA;Parent=GCA000010485_03188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K24845,RefSeq:WP_001296442.1,SO:0001217,UniParc:UPI00005F17E3,UniRef:UniRef100_E2QEJ4,UniRef:UniRef50_P45475,UniRef:UniRef90_Q8ZLT9
contig_1	Pyrodigal	gene	3264205	3265212	.	+	.	ID=GCA000010485_03189_gene;locus_tag=GCA000010485_03189;gene=yhbW
contig_1	Pyrodigal	CDS	3264205	3265212	.	+	0	ID=GCA000010485_03189;Name=luciferase-like monooxygenase;locus_tag=GCA000010485_03189;product=luciferase-like monooxygenase;Dbxref=GO:0005829,GO:0016705;gene=yhbW;Parent=GCA000010485_03189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000130380.1,SO:0001217,UniParc:UPI00000480D9,UniRef:UniRef100_P0ADV5,UniRef:UniRef50_P0ADV5,UniRef:UniRef90_P0ADV5
contig_1	Pyrodigal	gene	3265330	3266574	.	-	.	ID=GCA000010485_03190_gene;locus_tag=GCA000010485_03190;gene=mtr
contig_1	Pyrodigal	CDS	3265330	3266574	.	-	0	ID=GCA000010485_03190;Name=tryptophan permease;locus_tag=GCA000010485_03190;product=tryptophan permease;Dbxref=GO:0003333,GO:0005886,GO:0015173,GO:0015293,GO:0015801;gene=mtr;Parent=GCA000010485_03190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03835,RefSeq:WP_000224355.1,SO:0001217,UniParc:UPI0001C22C37,UniRef:UniRef100_A0A061YKM4,UniRef:UniRef50_P0AAD2,UniRef:UniRef90_P0AAD2
contig_1	Pyrodigal	gene	3266728	3268617	.	-	.	ID=GCA000010485_03191_gene;locus_tag=GCA000010485_03191;gene=deaD
contig_1	Pyrodigal	CDS	3266728	3268617	.	-	0	ID=GCA000010485_03191;Name=ATP-dependent RNA helicase DeaD;locus_tag=GCA000010485_03191;product=ATP-dependent RNA helicase DeaD;Dbxref=GO:0000027,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0005840,GO:0006401,GO:0016887,GO:0033592,GO:0061775,GO:0070417,GO:0140584,GO:0140665,GO:0140849;gene=deaD;Parent=GCA000010485_03191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295553,COG:COG0513,COG:L,RefSeq:WP_001295553.1,SO:0001217,UniParc:UPI00005EF85F,UniRef:UniRef100_P0A9P6,UniRef:UniRef50_P0A9P6,UniRef:UniRef90_P0A9P6;ec_number=3.6.4.13
contig_1	Bakta	gene	3268610	3268690	.	-	.	ID=GCA000010485_03192_gene;locus_tag=GCA000010485_03192;inference=ab initio prediction:Bakta;gene=yrbN
contig_1	Bakta	CDS	3268610	3268690	.	-	0	ID=GCA000010485_03192;Name=putative protein YrbN;locus_tag=GCA000010485_03192;product=putative protein YrbN;gene=yrbN;Parent=GCA000010485_03192_gene;Note=RefSeq:WP_010723222.1,SO:0001217,UniParc:UPI000199A54A,UniRef:UniRef100_C1P618,UniRef:UniRef50_C1P618,UniRef:UniRef90_C1P618
contig_1	Pyrodigal	gene	3268797	3269681	.	-	.	ID=GCA000010485_03193_gene;locus_tag=GCA000010485_03193;gene=nlpI
contig_1	Pyrodigal	CDS	3268797	3269681	.	-	0	ID=GCA000010485_03193;Name=lipoprotein NlpI;locus_tag=GCA000010485_03193;product=lipoprotein NlpI;Dbxref=GO:0005515,GO:0005886,GO:0051301;gene=nlpI;Parent=GCA000010485_03193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4785,COG:M,RefSeq:WP_000802080.1,SO:0001217,UniParc:UPI0000130223,UniRef:UniRef100_P0AFB1,UniRef:UniRef50_P0AFB1,UniRef:UniRef90_P0AFB1
contig_1	Pyrodigal	gene	3269790	3271925	.	-	.	ID=GCA000010485_03194_gene;locus_tag=GCA000010485_03194;gene=pnp
contig_1	Pyrodigal	CDS	3269790	3271925	.	-	0	ID=GCA000010485_03194;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000010485_03194;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA000010485_03194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_001296445.1,SO:0001217,UniParc:UPI0001B04C12,UniRef:UniRef100_B7LR33,UniRef:UniRef50_P05055,UniRef:UniRef90_P05055;ec_number=2.7.7.8
contig_1	Infernal	gene	3271984	3272155	.	+	.	ID=GCA000010485_03195_gene;locus_tag=GCA000010485_03195;gene=sraG
contig_1	Infernal	ncRNA	3271984	3272155	1.4e-26	+	.	ID=GCA000010485_03195;Name=SraG RNA;locus_tag=GCA000010485_03195;gene=sraG;product=SraG RNA;Dbxref=RFAM:RF00082;Parent=GCA000010485_03195_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00082
contig_1	Pyrodigal	gene	3272172	3272441	.	-	.	ID=GCA000010485_03196_gene;locus_tag=GCA000010485_03196;gene=rpsO
contig_1	Pyrodigal	CDS	3272172	3272441	.	-	0	ID=GCA000010485_03196;Name=30S ribosomal protein S15;locus_tag=GCA000010485_03196;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000010485_03196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_000059466.1,SO:0001217,UniParc:UPI0000163A0F,UniRef:UniRef100_P0ADZ4,UniRef:UniRef50_P0ADZ4,UniRef:UniRef90_P0ADZ4
contig_1	Infernal	regulatory_region	3272385	3272499	8.2e-18	-	.	ID=EFPPCJGBKI_298;Name=Ribosomal S15 leader;product=Ribosomal S15 leader;Dbxref=RFAM:RF00114;inference=profile:Rfam:RF00114;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	3272590	3273534	.	-	.	ID=GCA000010485_03197_gene;locus_tag=GCA000010485_03197;gene=truB
contig_1	Pyrodigal	CDS	3272590	3273534	.	-	0	ID=GCA000010485_03197;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000010485_03197;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000010485_03197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,KEGG:K03177,RefSeq:WP_000089698.1,SO:0001217,UniParc:UPI000013769B,UniRef:UniRef100_P60340,UniRef:UniRef50_P60340,UniRef:UniRef90_P60340;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	3273534	3273935	.	-	.	ID=GCA000010485_03198_gene;locus_tag=GCA000010485_03198;gene=rbfA
contig_1	Pyrodigal	CDS	3273534	3273935	.	-	0	ID=GCA000010485_03198;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000010485_03198;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0043024;gene=rbfA;Parent=GCA000010485_03198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0858,COG:J,KEGG:K02834,RefSeq:WP_001040205.1,SO:0001217,UniParc:UPI00001654F8,UniRef:UniRef100_P0A7G2,UniRef:UniRef50_P0A7G2,UniRef:UniRef90_P0A7G2
contig_1	Infernal	gene	3274012	3274082	.	-	.	ID=GCA000010485_03199_gene;locus_tag=GCA000010485_03199;gene=naRNA4
contig_1	Infernal	ncRNA	3274012	3274082	1.6e-10	-	.	ID=GCA000010485_03199;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_03199;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_03199_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	3274099	3276771	.	-	.	ID=GCA000010485_03200_gene;locus_tag=GCA000010485_03200;gene=infB
contig_1	Pyrodigal	CDS	3274099	3276771	.	-	0	ID=GCA000010485_03200;Name=translation initiation factor IF-2;locus_tag=GCA000010485_03200;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413,GO:0097216;gene=infB;Parent=GCA000010485_03200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02519,RefSeq:WP_000133040.1,SO:0001217,UniParc:UPI000000E971,UniRef:UniRef100_B7UJ63,UniRef:UniRef50_P0A705,UniRef:UniRef90_P0A705-2
contig_1	Pyrodigal	gene	3276796	3278283	.	-	.	ID=GCA000010485_03201_gene;locus_tag=GCA000010485_03201;gene=nusA
contig_1	Pyrodigal	CDS	3276796	3278283	.	-	0	ID=GCA000010485_03201;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA000010485_03201;product=Transcription termination/antitermination protein NusA;Dbxref=GO:0000166,GO:0001000,GO:0003700,GO:0003723,GO:0005829,GO:0006353,GO:0008023,GO:0019904,GO:0031564,GO:0032784,GO:0042254,GO:0051259;gene=nusA;Parent=GCA000010485_03201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0195,COG:K,RefSeq:WP_001031057.1,SO:0001217,UniParc:UPI0000130A38,UniRef:UniRef100_P0AFF6,UniRef:UniRef50_P0AFF6,UniRef:UniRef90_P0AFF6
contig_1	Pyrodigal	gene	3278311	3278763	.	-	.	ID=GCA000010485_03202_gene;locus_tag=GCA000010485_03202;gene=rimP
contig_1	Pyrodigal	CDS	3278311	3278763	.	-	0	ID=GCA000010485_03202;Name=ribosome maturation factor RimP;locus_tag=GCA000010485_03202;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000010485_03202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_001300397.1,SO:0001217,UniParc:UPI0000683E90,UniRef:UniRef100_P0A8A8,UniRef:UniRef50_P0A8A8,UniRef:UniRef90_P0A8A8
contig_1	Infernal	regulatory_region	3278781	3278881	1e-15	-	.	ID=EFPPCJGBKI_301;Name=Gammaprotebacteria rimP leader;product=Gammaprotebacteria rimP leader;Dbxref=RFAM:RF01770;inference=profile:Rfam:RF01770;Note=SO:0000140;regulatory_class=attenuator
contig_1	tRNAscan-SE	gene	3278970	3279046	.	-	.	ID=GCA000010485_03203_gene;locus_tag=GCA000010485_03203;gene=trnfM
contig_1	tRNAscan-SE	tRNA	3278970	3279046	.	-	.	ID=GCA000010485_03203;Name=tRNA-fMet(cat);locus_tag=GCA000010485_03203;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000010485_03203_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	3279394	3280737	.	+	.	ID=GCA000010485_03204_gene;locus_tag=GCA000010485_03204;gene=argG
contig_1	Pyrodigal	CDS	3279394	3280737	.	+	0	ID=GCA000010485_03204;Name=argininosuccinate synthase;locus_tag=GCA000010485_03204;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526,GO:0042803;gene=argG;Parent=GCA000010485_03204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_000207680.1,SO:0001217,UniParc:UPI0000167DE1,UniRef:UniRef100_P0A6E4,UniRef:UniRef50_P0A6E4,UniRef:UniRef90_P0A6E4;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	3280745	3282262	.	-	.	ID=GCA000010485_03205_gene;locus_tag=GCA000010485_03205;gene=yhbX
contig_1	Pyrodigal	CDS	3280745	3282262	.	-	0	ID=GCA000010485_03205;Name=Putative transferase YhbX;locus_tag=GCA000010485_03205;product=Putative transferase YhbX;Dbxref=GO:0005886,GO:0009244,GO:0016776;gene=yhbX;Parent=GCA000010485_03205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19353,RefSeq:WP_001296447.1,SO:0001217,UniParc:UPI00021858D9,UniRef:UniRef100_A0A1U9TUB4,UniRef:UniRef50_P42640,UniRef:UniRef90_P42640;ec_number=2.-.-.-
contig_1	tRNAscan-SE	gene	3282827	3282913	.	-	.	ID=GCA000010485_03206_gene;locus_tag=GCA000010485_03206;gene=trnL
contig_1	tRNAscan-SE	tRNA	3282827	3282913	.	-	.	ID=GCA000010485_03206;Name=tRNA-Leu(gag);locus_tag=GCA000010485_03206;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000010485_03206_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	3282928	3283260	.	-	.	ID=GCA000010485_03207_gene;locus_tag=GCA000010485_03207;gene=secG
contig_1	Pyrodigal	CDS	3282928	3283260	.	-	0	ID=GCA000010485_03207;Name=preprotein translocase subunit SecG;locus_tag=GCA000010485_03207;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0006616,GO:0006886,GO:0008320,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0031522,GO:0032978,GO:0043952,GO:0065002;gene=secG;Parent=GCA000010485_03207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_001295556.1,SO:0001217,UniParc:UPI0000031A40,UniRef:UniRef100_P0AG99,UniRef:UniRef50_P0AG99,UniRef:UniRef90_P0AG99
contig_1	Pyrodigal	gene	3283488	3284825	.	-	.	ID=GCA000010485_03208_gene;locus_tag=GCA000010485_03208;gene=glmM
contig_1	Pyrodigal	CDS	3283488	3284825	.	-	0	ID=GCA000010485_03208;Name=phosphoglucosamine mutase;locus_tag=GCA000010485_03208;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252,GO:0016868;gene=glmM;Parent=GCA000010485_03208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_000071137.1,SO:0001217,UniParc:UPI00000DF0E6,UniRef:UniRef100_B7UJ69,UniRef:UniRef50_P31120,UniRef:UniRef90_P31120;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	3284818	3285666	.	-	.	ID=GCA000010485_03209_gene;locus_tag=GCA000010485_03209;gene=folP
contig_1	Pyrodigal	CDS	3284818	3285666	.	-	0	ID=GCA000010485_03209;Name=dihydropteroate synthase;locus_tag=GCA000010485_03209;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0005829,GO:0046654,GO:0046656,GO:0046872;gene=folP;Parent=GCA000010485_03209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0294,COG:H,KEGG:K00796,RefSeq:WP_000764749.1,SO:0001217,UniParc:UPI0001C22C3A,UniRef:UniRef100_A0A061KD91,UniRef:UniRef50_P0AC13,UniRef:UniRef90_P0AC13;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	3285756	3287699	.	-	.	ID=GCA000010485_03210_gene;locus_tag=GCA000010485_03210;gene=ftsH
contig_1	Pyrodigal	CDS	3285756	3287699	.	-	0	ID=GCA000010485_03210;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA000010485_03210;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004176,GO:0004222,GO:0005524,GO:0005886,GO:0006508,GO:0008270,GO:0016887,GO:0030163,GO:0098796,GO:0098797;gene=ftsH;Parent=GCA000010485_03210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0465,COG:O,SO:0001217,UniParc:UPI000016ED12,UniRef:UniRef100_P0AAI3,UniRef:UniRef50_P0AAI3,UniRef:UniRef90_P0AAI3;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	3287790	3288419	.	-	.	ID=GCA000010485_03211_gene;locus_tag=GCA000010485_03211;gene=rlmE
contig_1	Pyrodigal	CDS	3287790	3288419	.	-	0	ID=GCA000010485_03211;Name=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;locus_tag=GCA000010485_03211;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;Dbxref=GO:0001510,GO:0005737,GO:0006364,GO:0008650,GO:0016436;gene=rlmE;Parent=GCA000010485_03211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0293,COG:J,RefSeq:WP_000145975.1,SO:0001217,UniParc:UPI0000134A54,UniRef:UniRef100_A8AQ68,UniRef:UniRef50_Q8ZBB5,UniRef:UniRef90_A7MIM8;ec_number=2.1.1.166
contig_1	Pyrodigal	gene	3288545	3288838	.	+	.	ID=GCA000010485_03212_gene;locus_tag=GCA000010485_03212;gene=yhbY
contig_1	Pyrodigal	CDS	3288545	3288838	.	+	0	ID=GCA000010485_03212;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA000010485_03212;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA000010485_03212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_001054420.1,SO:0001217,UniParc:UPI000013B1CD,UniRef:UniRef100_P0AGK4,UniRef:UniRef50_P0AGK4,UniRef:UniRef90_P0AGK4
contig_1	Pyrodigal	gene	3288994	3289470	.	-	.	ID=GCA000010485_03213_gene;locus_tag=GCA000010485_03213;gene=greA
contig_1	Pyrodigal	CDS	3288994	3289470	.	-	0	ID=GCA000010485_03213;Name=transcription elongation factor GreA;locus_tag=GCA000010485_03213;product=transcription elongation factor GreA;Dbxref=GO:0001108,GO:0003677,GO:0005737,GO:0005829,GO:0006354,GO:0032784,GO:0070063;gene=greA;Parent=GCA000010485_03213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_001148001.1,SO:0001217,UniParc:UPI00001119B5,UniRef:UniRef100_P0A6W5,UniRef:UniRef50_P0A6W5,UniRef:UniRef90_P0A6W5
contig_1	Infernal	regulatory_region	3289566	3289687	1.9e-19	-	.	ID=EFPPCJGBKI_293;Name=Enterobacteria greA leader;product=Enterobacteria greA leader;Dbxref=RFAM:RF01769;inference=profile:Rfam:RF01769;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	3289718	3291151	.	+	.	ID=GCA000010485_03214_gene;locus_tag=GCA000010485_03214;gene=dacB
contig_1	Pyrodigal	CDS	3289718	3291151	.	+	0	ID=GCA000010485_03214;Name=serine-type D-Ala-D-Ala carboxypeptidase;locus_tag=GCA000010485_03214;product=serine-type D-Ala-D-Ala carboxypeptidase;Dbxref=GO:0000270,GO:0004175,GO:0004180,GO:0004185,GO:0004252,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0009002,GO:0009252,GO:0042597,GO:0043093,GO:0046677,GO:0071555;gene=dacB;Parent=GCA000010485_03214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2027,COG:M,RefSeq:WP_001212629.1,SO:0001217,UniParc:UPI0001C22C3B,UniRef:UniRef100_A0A061YKP9,UniRef:UniRef50_P24228,UniRef:UniRef90_P24228;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	3291192	3292364	.	-	.	ID=GCA000010485_03215_gene;locus_tag=GCA000010485_03215;gene=cgtA
contig_1	Pyrodigal	CDS	3291192	3292364	.	-	0	ID=GCA000010485_03215;Name=Obg family GTPase CgtA;locus_tag=GCA000010485_03215;product=Obg family GTPase CgtA;Dbxref=GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=cgtA;Parent=GCA000010485_03215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673561.1,SO:0001217,UniParc:UPI000000E656,UniRef:UniRef100_A7ZS79,UniRef:UniRef50_P42641,UniRef:UniRef90_A7ZS79;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	3292380	3293345	.	-	.	ID=GCA000010485_03216_gene;locus_tag=GCA000010485_03216;gene=yhbE
contig_1	Pyrodigal	CDS	3292380	3293345	.	-	0	ID=GCA000010485_03216;Name=putative inner membrane transporter YhbE;locus_tag=GCA000010485_03216;product=putative inner membrane transporter YhbE;Dbxref=GO:0005886;gene=yhbE;Parent=GCA000010485_03216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_000813040.1,SO:0001217,UniParc:UPI00000DF0E8,UniRef:UniRef100_E2QEL7,UniRef:UniRef50_P0AA73,UniRef:UniRef90_P0AA73
contig_1	Pyrodigal	gene	3293472	3293729	.	-	.	ID=GCA000010485_03217_gene;locus_tag=GCA000010485_03217;gene=rpmA
contig_1	Pyrodigal	CDS	3293472	3293729	.	-	0	ID=GCA000010485_03217;Name=50S ribosomal protein L27;locus_tag=GCA000010485_03217;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000010485_03217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_000940595.1,SO:0001217,UniParc:UPI0000050EFF,UniRef:UniRef100_P0A7L8,UniRef:UniRef50_P0A7L8,UniRef:UniRef90_P0A7L8
contig_1	Pyrodigal	gene	3293750	3294061	.	-	.	ID=GCA000010485_03218_gene;locus_tag=GCA000010485_03218;gene=rplU
contig_1	Pyrodigal	CDS	3293750	3294061	.	-	0	ID=GCA000010485_03218;Name=50S ribosomal protein L21;locus_tag=GCA000010485_03218;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA000010485_03218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,RefSeq:WP_000271401.1,SO:0001217,UniParc:UPI0000133D38,UniRef:UniRef100_P0AG48,UniRef:UniRef50_P0AG48,UniRef:UniRef90_P0AG48
contig_1	Pyrodigal	gene	3294320	3295291	.	+	.	ID=GCA000010485_03219_gene;locus_tag=GCA000010485_03219;gene=ispB
contig_1	Pyrodigal	CDS	3294320	3295291	.	+	0	ID=GCA000010485_03219;Name=octaprenyl diphosphate synthase;locus_tag=GCA000010485_03219;product=octaprenyl diphosphate synthase;Dbxref=GO:0008299,GO:0046872,GO:0106350;gene=ispB;Parent=GCA000010485_03219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_001047336.1,SO:0001217,UniParc:UPI000012D912,UniRef:UniRef100_P0AD57,UniRef:UniRef50_P0AD57,UniRef:UniRef90_P0AD57;ec_number=2.5.1.90
contig_1	Pyrodigal	gene	3295524	3295802	.	+	.	ID=GCA000010485_03220_gene;locus_tag=GCA000010485_03220;gene=sfsB
contig_1	Pyrodigal	CDS	3295524	3295802	.	+	0	ID=GCA000010485_03220;Name=DNA-binding transcriptional regulator SfsB;locus_tag=GCA000010485_03220;product=DNA-binding transcriptional regulator SfsB;Dbxref=GO:0003677;gene=sfsB;Parent=GCA000010485_03220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3423,COG:K,KEGG:K07724,RefSeq:WP_000445413.1,SO:0001217,UniParc:UPI00001358DF,UniRef:UniRef100_P0ACH1,UniRef:UniRef50_P0ACH1,UniRef:UniRef90_P0ACH1
contig_1	Pyrodigal	gene	3295850	3297109	.	-	.	ID=GCA000010485_03221_gene;locus_tag=GCA000010485_03221;gene=murA
contig_1	Pyrodigal	CDS	3295850	3297109	.	-	0	ID=GCA000010485_03221;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA;locus_tag=GCA000010485_03221;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA;Parent=GCA000010485_03221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_000357259.1,SO:0001217,UniParc:UPI0000112E58,UniRef:UniRef100_P0A749,UniRef:UniRef50_P33038,UniRef:UniRef90_P33038;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	3297164	3297433	.	-	.	ID=GCA000010485_03222_gene;locus_tag=GCA000010485_03222;gene=ibaG
contig_1	Pyrodigal	CDS	3297164	3297433	.	-	0	ID=GCA000010485_03222;Name=BolA family iron metabolism protein IbaG;locus_tag=GCA000010485_03222;product=BolA family iron metabolism protein IbaG;Dbxref=GO:0005829,GO:0006879,GO:0016226,GO:0045454,GO:0051537,GO:0097533,GO:1990229;gene=ibaG;Parent=GCA000010485_03222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000368006,BlastRules:WP_000429656,BlastRules:WP_004814457,COG:COG5007,COG:T,RefSeq:WP_000568740.1,SO:0001217,UniParc:UPI00000D00A4,UniRef:UniRef100_P0A9W6,UniRef:UniRef50_P0A9W6,UniRef:UniRef90_P0A9W6
contig_1	Pyrodigal	gene	3297578	3297871	.	-	.	ID=GCA000010485_03223_gene;locus_tag=GCA000010485_03223;gene=mlaB
contig_1	Pyrodigal	CDS	3297578	3297871	.	-	0	ID=GCA000010485_03223;Name=lipid asymmetry maintenance protein MlaB;locus_tag=GCA000010485_03223;product=lipid asymmetry maintenance protein MlaB;gene=mlaB;Parent=GCA000010485_03223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000004487.1,SO:0001217,UniParc:UPI00005EFD6B,UniRef:UniRef100_E2QEM4,UniRef:UniRef50_Q31W68,UniRef:UniRef90_Q31W68
contig_1	Pyrodigal	gene	3297871	3298506	.	-	.	ID=GCA000010485_03224_gene;locus_tag=GCA000010485_03224;gene=mlaC
contig_1	Pyrodigal	CDS	3297871	3298506	.	-	0	ID=GCA000010485_03224;Name=phospholipid-binding protein MlaC;locus_tag=GCA000010485_03224;product=phospholipid-binding protein MlaC;Dbxref=GO:0042597;gene=mlaC;Parent=GCA000010485_03224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2854,COG:M,KEGG:K07323,RefSeq:WP_000476484.1,SO:0001217,UniParc:UPI00000D07F3,UniRef:UniRef100_C3SSD2,UniRef:UniRef50_P0ADV7,UniRef:UniRef90_P0ADV7
contig_1	Pyrodigal	gene	3298525	3299076	.	-	.	ID=GCA000010485_03225_gene;locus_tag=GCA000010485_03225;gene=mlaD
contig_1	Pyrodigal	CDS	3298525	3299076	.	-	0	ID=GCA000010485_03225;Name=outer membrane lipid asymmetry maintenance protein MlaD;locus_tag=GCA000010485_03225;product=outer membrane lipid asymmetry maintenance protein MlaD;Dbxref=GO:0005543,GO:0005886,GO:0015914,GO:0016020,GO:0120010,GO:0120014,GO:1990531;gene=mlaD;Parent=GCA000010485_03225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1463,COG:M,RefSeq:WP_001296448.1,SO:0001217,UniParc:UPI000013BFAA,UniRef:UniRef100_P64604,UniRef:UniRef50_P64604,UniRef:UniRef90_P64604
contig_1	Pyrodigal	gene	3299081	3299863	.	-	.	ID=GCA000010485_03226_gene;locus_tag=GCA000010485_03226;gene=mlaE
contig_1	Pyrodigal	CDS	3299081	3299863	.	-	0	ID=GCA000010485_03226;Name=lipid asymmetry maintenance ABC transporter permease subunit MlaE;locus_tag=GCA000010485_03226;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;Dbxref=GO:0005548,GO:0043190;gene=mlaE;Parent=GCA000010485_03226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_000925795.1,SO:0001217,UniParc:UPI000013BFAC,UniRef:UniRef100_P64606,UniRef:UniRef50_P64606,UniRef:UniRef90_P64606
contig_1	Pyrodigal	gene	3299871	3300680	.	-	.	ID=GCA000010485_03227_gene;locus_tag=GCA000010485_03227;gene=mlaF
contig_1	Pyrodigal	CDS	3299871	3300680	.	-	0	ID=GCA000010485_03227;Name=phospholipid ABC transporter ATP-binding protein MlaF;locus_tag=GCA000010485_03227;product=phospholipid ABC transporter ATP-binding protein MlaF;Dbxref=GO:0005524,GO:0005886,GO:0015914,GO:0016020,GO:0016887,GO:0120010,GO:0120014,GO:1990531;gene=mlaF;Parent=GCA000010485_03227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1127,COG:M,RefSeq:WP_000438245.1,SO:0001217,UniParc:UPI000013BFAE,UniRef:UniRef100_P63386,UniRef:UniRef50_P63386,UniRef:UniRef90_P63386;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3300890	3301867	.	+	.	ID=GCA000010485_03228_gene;locus_tag=GCA000010485_03228;gene=yrbG
contig_1	Pyrodigal	CDS	3300890	3301867	.	+	0	ID=GCA000010485_03228;Name=calcium/sodium antiporter;locus_tag=GCA000010485_03228;product=calcium/sodium antiporter;Dbxref=GO:0005262,GO:0005886,GO:0006874,GO:0008273,GO:0070588;gene=yrbG;Parent=GCA000010485_03228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0530,COG:P,RefSeq:WP_000922880.1,SO:0001217,UniParc:UPI00000DF0EF,UniRef:UniRef100_A0A066SQ81,UniRef:UniRef50_P45394,UniRef:UniRef90_P45394
contig_1	Pyrodigal	gene	3301881	3302867	.	+	.	ID=GCA000010485_03229_gene;locus_tag=GCA000010485_03229;gene=kdsD
contig_1	Pyrodigal	CDS	3301881	3302867	.	+	0	ID=GCA000010485_03229;Name=arabinose-5-phosphate isomerase KdsD;locus_tag=GCA000010485_03229;product=arabinose-5-phosphate isomerase KdsD;Dbxref=GO:0009103,GO:0016853,GO:0019146,GO:0046872,GO:0097367,GO:1901135;gene=kdsD;Parent=GCA000010485_03229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2905,COG:T,RefSeq:WP_001295557.1,SO:0001217,UniParc:UPI000013BFB1,UniRef:UniRef100_P45395,UniRef:UniRef50_P45395,UniRef:UniRef90_P45395;ec_number=5.3.1.13
contig_1	Pyrodigal	gene	3302888	3303454	.	+	.	ID=GCA000010485_03230_gene;locus_tag=GCA000010485_03230;gene=kdsC
contig_1	Pyrodigal	CDS	3302888	3303454	.	+	0	ID=GCA000010485_03230;Name=3-deoxy-manno-octulosonate-8-phosphatase KdsC;locus_tag=GCA000010485_03230;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;Dbxref=GO:0008781,GO:0009103,GO:0016788,GO:0019143,GO:0046872;gene=kdsC;Parent=GCA000010485_03230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1778,COG:MR,RefSeq:WP_000030016.1,SO:0001217,UniParc:UPI000000E65B,UniRef:UniRef100_A0A140N5J7,UniRef:UniRef50_A0A140N5J7,UniRef:UniRef90_A0A140N5J7;ec_number=3.1.3.45
contig_1	Pyrodigal	gene	3303451	3304026	.	+	.	ID=GCA000010485_03231_gene;locus_tag=GCA000010485_03231;gene=lptC
contig_1	Pyrodigal	CDS	3303451	3304026	.	+	0	ID=GCA000010485_03231;Name=LPS export ABC transporter periplasmic protein LptC;locus_tag=GCA000010485_03231;product=LPS export ABC transporter periplasmic protein LptC;Dbxref=GO:0005886,GO:0015221,GO:0017089,GO:0030288,GO:0043165;gene=lptC;Parent=GCA000010485_03231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3117,COG:M,RefSeq:WP_000030537.1,SO:0001217,UniParc:UPI000013BFB4,UniRef:UniRef100_P0ADV9,UniRef:UniRef50_P0ADV9,UniRef:UniRef90_P0ADV9;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	3303995	3304552	.	+	.	ID=GCA000010485_03232_gene;locus_tag=GCA000010485_03232;gene=lptA
contig_1	Pyrodigal	CDS	3303995	3304552	.	+	0	ID=GCA000010485_03232;Name=lipopolysaccharide ABC transporter substrate-binding protein LptA;locus_tag=GCA000010485_03232;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;Dbxref=GO:0001530,GO:0009279,GO:0015920,GO:0017089,GO:0030288,GO:0043165;gene=lptA;Parent=GCA000010485_03232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1934,COG:M,KEGG:K09774,RefSeq:WP_000669785.1,SO:0001217,UniParc:UPI000013B1C0,UniRef:UniRef100_P0ADV1,UniRef:UniRef50_P0ADV1,UniRef:UniRef90_P0ADV1;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	3304559	3305284	.	+	.	ID=GCA000010485_03233_gene;locus_tag=GCA000010485_03233;gene=lptB
contig_1	Pyrodigal	CDS	3304559	3305284	.	+	0	ID=GCA000010485_03233;Name=LPS export ABC transporter ATP-binding protein;locus_tag=GCA000010485_03233;product=LPS export ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0043190,GO:0055085;gene=lptB;Parent=GCA000010485_03233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1137,COG:M,RefSeq:WP_000224099.1,SO:0001217,UniParc:UPI0000163A14,UniRef:UniRef100_P0A9V1,UniRef:UniRef50_P0A9V1,UniRef:UniRef90_P0A9V1;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	3305332	3306765	.	+	.	ID=GCA000010485_03234_gene;locus_tag=GCA000010485_03234;gene=rpoN
contig_1	Pyrodigal	CDS	3305332	3306765	.	+	0	ID=GCA000010485_03234;Name=RNA polymerase factor sigma-54;locus_tag=GCA000010485_03234;product=RNA polymerase factor sigma-54;Dbxref=GO:0001216,GO:0003677,GO:0006352,GO:0016987,GO:0022627,GO:0043024,GO:0045900;gene=rpoN;Parent=GCA000010485_03234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1508,COG:K,KEGG:K03092,RefSeq:WP_000809051.1,SO:0001217,UniParc:UPI00000D07FB,UniRef:UniRef100_C3SS82,UniRef:UniRef50_P24255,UniRef:UniRef90_P24255;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	3306788	3307075	.	+	.	ID=GCA000010485_03235_gene;locus_tag=GCA000010485_03235;gene=hpf
contig_1	Pyrodigal	CDS	3306788	3307075	.	+	0	ID=GCA000010485_03235;Name=ribosome hibernation promoting factor;locus_tag=GCA000010485_03235;product=ribosome hibernation promoting factor;Dbxref=GO:0022627,GO:0043024,GO:0044238,GO:0045900;gene=hpf;Parent=GCA000010485_03235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_001176599.1,SO:0001217,UniParc:UPI0000134589,UniRef:UniRef100_P0AFX0,UniRef:UniRef50_P0AFX0,UniRef:UniRef90_P0AFX0
contig_1	Pyrodigal	gene	3307193	3307684	.	+	.	ID=GCA000010485_03236_gene;locus_tag=GCA000010485_03236;gene=ptsN
contig_1	Pyrodigal	CDS	3307193	3307684	.	+	0	ID=GCA000010485_03236;Name=PTS IIA-like nitrogen regulatory protein PtsN;locus_tag=GCA000010485_03236;product=PTS IIA-like nitrogen regulatory protein PtsN;Dbxref=GO:0004857,GO:0005829,GO:0008982,GO:0009401,GO:0016301,GO:0030295;gene=ptsN;Parent=GCA000010485_03236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000183674.1,SO:0001217,UniParc:UPI00005EFD68,UniRef:UniRef100_A0A484YMQ1,UniRef:UniRef50_P69829,UniRef:UniRef90_P69829
contig_1	Pyrodigal	gene	3307730	3308584	.	+	.	ID=GCA000010485_03237_gene;locus_tag=GCA000010485_03237;gene=rapZ
contig_1	Pyrodigal	CDS	3307730	3308584	.	+	0	ID=GCA000010485_03237;Name=RNase adapter RapZ;locus_tag=GCA000010485_03237;product=RNase adapter RapZ;Dbxref=GO:0003723,GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000010485_03237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_000243741.1,SO:0001217,UniParc:UPI000013B1BD,UniRef:UniRef100_P0A894,UniRef:UniRef50_P0A894,UniRef:UniRef90_P0A894
contig_1	Pyrodigal	gene	3308581	3308853	.	+	.	ID=GCA000010485_03238_gene;locus_tag=GCA000010485_03238;gene=npr
contig_1	Pyrodigal	CDS	3308581	3308853	.	+	0	ID=GCA000010485_03238;Name=PTS phosphocarrier protein NPr;locus_tag=GCA000010485_03238;product=PTS phosphocarrier protein NPr;Dbxref=GO:0005737,GO:0009401;gene=npr;Parent=GCA000010485_03238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_000216791.1,SO:0001217,UniParc:UPI00001329D0,UniRef:UniRef100_P0A9N0,UniRef:UniRef50_P0A9N0,UniRef:UniRef90_P0A9N0
contig_1	Pyrodigal	gene	3309066	3309698	.	+	.	ID=GCA000010485_03239_gene;locus_tag=GCA000010485_03239;gene=yrbL
contig_1	Pyrodigal	CDS	3309066	3309698	.	+	0	ID=GCA000010485_03239;Name=PhoP regulatory network protein YrbL;locus_tag=GCA000010485_03239;product=PhoP regulatory network protein YrbL;Dbxref=GO:0005886;gene=yrbL;Parent=GCA000010485_03239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000620405.1,SO:0001217,UniParc:UPI000013BFB6,UniRef:UniRef100_P64610,UniRef:UniRef50_P64610,UniRef:UniRef90_P64610
contig_1	Pyrodigal	gene	3309695	3310423	.	-	.	ID=GCA000010485_03240_gene;locus_tag=GCA000010485_03240;gene=mtgA
contig_1	Pyrodigal	CDS	3309695	3310423	.	-	0	ID=GCA000010485_03240;Name=monofunctional biosynthetic peptidoglycan transglycosylase;locus_tag=GCA000010485_03240;product=monofunctional biosynthetic peptidoglycan transglycosylase;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0009274,GO:0016020,GO:0016763,GO:0071555;gene=mtgA;Parent=GCA000010485_03240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K03814,RefSeq:WP_000047069.1,SO:0001217,UniParc:UPI00000DF0F3,UniRef:UniRef100_B7MBX7,UniRef:UniRef50_P46022,UniRef:UniRef90_P46022;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	3310420	3311073	.	-	.	ID=GCA000010485_03241_gene;locus_tag=GCA000010485_03241;gene=elbB
contig_1	Pyrodigal	CDS	3310420	3311073	.	-	0	ID=GCA000010485_03241;Name=isoprenoid biosynthesis glyoxalase ElbB;locus_tag=GCA000010485_03241;product=isoprenoid biosynthesis glyoxalase ElbB;Dbxref=GO:0016829;gene=elbB;Parent=GCA000010485_03241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3155,COG:V,RefSeq:WP_000719791.1,SO:0001217,UniParc:UPI00000DF0F4,UniRef:UniRef100_A0A066SXW2,UniRef:UniRef50_P0ABU5,UniRef:UniRef90_P0ABU5;ec_number=4.2.1.-
contig_1	Infernal	gene	3311191	3311298	.	+	.	ID=GCA000010485_03242_gene;locus_tag=GCA000010485_03242;gene=arcZ
contig_1	Infernal	ncRNA	3311191	3311298	6.6e-20	+	.	ID=GCA000010485_03242;Name=ArcZ RNA;locus_tag=GCA000010485_03242;gene=arcZ;product=ArcZ RNA;Dbxref=RFAM:RF00081;Parent=GCA000010485_03242_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00081
contig_1	Pyrodigal	gene	3311303	3313639	.	-	.	ID=GCA000010485_03243_gene;locus_tag=GCA000010485_03243;gene=arcB
contig_1	Pyrodigal	CDS	3311303	3313639	.	-	0	ID=GCA000010485_03243;Name=aerobic respiration two-component sensor histidine kinase ArcB;locus_tag=GCA000010485_03243;product=aerobic respiration two-component sensor histidine kinase ArcB;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0006355,GO:0009927,GO:0016020,GO:0016310;gene=arcB;Parent=GCA000010485_03243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2198,COG:T,RefSeq:WP_000809780.1,SO:0001217,UniParc:UPI0000D50CB7,UniRef:UniRef100_A0A066SYM7,UniRef:UniRef50_P0AEC3,UniRef:UniRef90_P0AEC3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3313735	3314664	.	-	.	ID=GCA000010485_03244_gene;locus_tag=GCA000010485_03244;gene=yhcC
contig_1	Pyrodigal	CDS	3313735	3314664	.	-	0	ID=GCA000010485_03244;Name=TIGR01212 family radical SAM protein;locus_tag=GCA000010485_03244;product=TIGR01212 family radical SAM protein;Dbxref=GO:0051536,GO:1904047;gene=yhcC;Parent=GCA000010485_03244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1242,COG:R,KEGG:K07139,RefSeq:WP_001296449.1,SO:0001217,UniParc:UPI0000E4519E,UniRef:UniRef100_E2QEP4,UniRef:UniRef50_P0ADW6,UniRef:UniRef90_Q32BC2
contig_1	Pyrodigal	gene	3315246	3319799	.	+	.	ID=GCA000010485_03245_gene;locus_tag=GCA000010485_03245;gene=gltB
contig_1	Pyrodigal	CDS	3315246	3319799	.	+	0	ID=GCA000010485_03245;Name=glutamate synthase large subunit;locus_tag=GCA000010485_03245;product=glutamate synthase large subunit;Dbxref=GO:0003824,GO:0004355,GO:0005829,GO:0006537,GO:0008152,GO:0009342,GO:0015930,GO:0016491,GO:0019676,GO:0046872,GO:0051538,GO:0097054;gene=gltB;Parent=GCA000010485_03245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0070,COG:E,SO:0001217,UniParc:UPI0001610B6D,UniRef:UniRef100_A0A0A2RSA1,UniRef:UniRef50_P09831,UniRef:UniRef90_P09831;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	3319812	3321230	.	+	.	ID=GCA000010485_03246_gene;locus_tag=GCA000010485_03246;gene=gltD
contig_1	Pyrodigal	CDS	3319812	3321230	.	+	0	ID=GCA000010485_03246;Name=glutamate synthase subunit GltD;locus_tag=GCA000010485_03246;product=glutamate synthase subunit GltD;Dbxref=GO:0004355,GO:0005829,GO:0006537,GO:0009342,GO:0019676,GO:0046872,GO:0051539,GO:0097054;gene=gltD;Parent=GCA000010485_03246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000081674,COG:COG0493,COG:ER,RefSeq:WP_000081656.1,SO:0001217,UniParc:UPI0001C22C71,UniRef:UniRef100_A0A066SXW4,UniRef:UniRef50_P09832,UniRef:UniRef90_P09832;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	3321298	3321762	.	-	.	ID=GCA000010485_03247_gene;locus_tag=GCA000010485_03247;gene=nanQ
contig_1	Pyrodigal	CDS	3321298	3321762	.	-	0	ID=GCA000010485_03247;Name=N-acetylneuraminate anomerase;locus_tag=GCA000010485_03247;product=N-acetylneuraminate anomerase;Dbxref=GO:0005829,GO:0006974,GO:0008270,GO:0016857,GO:0019262;gene=nanQ;Parent=GCA000010485_03247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2731,COG:G,RefSeq:WP_000979876.1,SO:0001217,UniParc:UPI0001C22C72,UniRef:UniRef100_A0A066SYN0,UniRef:UniRef50_P45424,UniRef:UniRef90_P45424
contig_1	Pyrodigal	gene	3321759	3322634	.	-	.	ID=GCA000010485_03248_gene;locus_tag=GCA000010485_03248;gene=nanK
contig_1	Pyrodigal	CDS	3321759	3322634	.	-	0	ID=GCA000010485_03248;Name=N-acetylmannosamine kinase;locus_tag=GCA000010485_03248;product=N-acetylmannosamine kinase;Dbxref=GO:0005524,GO:0008270,GO:0009384,GO:0019262;gene=nanK;Parent=GCA000010485_03248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000208982,BlastRules:WP_000209011,COG:COG1940,COG:GK,KEGG:K00885,RefSeq:WP_000209057.1,SO:0001217,UniParc:UPI0001887902,UniRef:UniRef100_A0A061KID2,UniRef:UniRef50_P45425,UniRef:UniRef90_P45425;ec_number=2.7.1.60
contig_1	Pyrodigal	gene	3322631	3323320	.	-	.	ID=GCA000010485_03249_gene;locus_tag=GCA000010485_03249;gene=nanE
contig_1	Pyrodigal	CDS	3322631	3323320	.	-	0	ID=GCA000010485_03249;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000010485_03249;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Dbxref=GO:0005829,GO:0005975,GO:0006053,GO:0019262,GO:0047465;gene=nanE;Parent=GCA000010485_03249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_000054239.1,SO:0001217,UniParc:UPI000012FD47,UniRef:UniRef100_P0A761,UniRef:UniRef50_P0A761,UniRef:UniRef90_P0A761;ec_number=5.1.3.9
contig_1	Pyrodigal	gene	3323368	3324858	.	-	.	ID=GCA000010485_03250_gene;locus_tag=GCA000010485_03250;gene=nanT
contig_1	Pyrodigal	CDS	3323368	3324858	.	-	0	ID=GCA000010485_03250;Name=sialic acid transporter NanT;locus_tag=GCA000010485_03250;product=sialic acid transporter NanT;Dbxref=GO:0005886,GO:0015538,GO:0046943;gene=nanT;Parent=GCA000010485_03250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000108454,COG:COG2814,COG:G,KEGG:K03290,RefSeq:WP_000108477.1,SO:0001217,UniParc:UPI00019F4AF9,UniRef:UniRef100_A0A0C5EKU3,UniRef:UniRef50_P41036,UniRef:UniRef90_P41036
contig_1	Pyrodigal	gene	3324967	3325860	.	-	.	ID=GCA000010485_03251_gene;locus_tag=GCA000010485_03251;gene=nanA
contig_1	Pyrodigal	CDS	3324967	3325860	.	-	0	ID=GCA000010485_03251;Name=N-acetylneuraminate lyase;locus_tag=GCA000010485_03251;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA000010485_03251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_000224714.1,SO:0001217,UniParc:UPI0000157414,UniRef:UniRef100_P0A6L4,UniRef:UniRef50_P0A6L4,UniRef:UniRef90_P0A6L4;ec_number=4.1.3.3
contig_1	Pyrodigal	gene	3325982	3326764	.	-	.	ID=GCA000010485_03252_gene;locus_tag=GCA000010485_03252;gene=nanR
contig_1	Pyrodigal	CDS	3325982	3326764	.	-	0	ID=GCA000010485_03252;Name=transcriptional regulator NanR;locus_tag=GCA000010485_03252;product=transcriptional regulator NanR;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=nanR;Parent=GCA000010485_03252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000382926,COG:COG2186,COG:K,KEGG:K22104,RefSeq:WP_001296451.1,SO:0001217,UniParc:UPI0001E1781B,UniRef:UniRef100_A0A0A2RRQ4,UniRef:UniRef50_P0A8W0,UniRef:UniRef90_P0A8W0
contig_1	Pyrodigal	gene	3326881	3327378	.	-	.	ID=GCA000010485_03253_gene;locus_tag=GCA000010485_03253;gene=sspB
contig_1	Pyrodigal	CDS	3326881	3327378	.	-	0	ID=GCA000010485_03253;Name=ClpXP protease specificity-enhancing factor;locus_tag=GCA000010485_03253;product=ClpXP protease specificity-enhancing factor;gene=sspB;Parent=GCA000010485_03253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366127.1,SO:0001217,UniParc:UPI00000DF0FD,UniRef:UniRef100_E2QEQ4,UniRef:UniRef50_P0AFZ3,UniRef:UniRef90_E2QEQ4
contig_1	Pyrodigal	gene	3327384	3328022	.	-	.	ID=GCA000010485_03254_gene;locus_tag=GCA000010485_03254;gene=sspA
contig_1	Pyrodigal	CDS	3327384	3328022	.	-	0	ID=GCA000010485_03254;Name=stringent starvation protein SspA;locus_tag=GCA000010485_03254;product=stringent starvation protein SspA;Dbxref=GO:0005515,GO:0005737,GO:0006749;gene=sspA;Parent=GCA000010485_03254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_000257293.1,SO:0001217,UniParc:UPI000003EB01,UniRef:UniRef100_P0ACA3,UniRef:UniRef50_P0ACA3,UniRef:UniRef90_P0ACA3
contig_1	Pyrodigal	gene	3328417	3328809	.	-	.	ID=GCA000010485_03255_gene;locus_tag=GCA000010485_03255;gene=rpsI
contig_1	Pyrodigal	CDS	3328417	3328809	.	-	0	ID=GCA000010485_03255;Name=30S ribosomal protein S9;locus_tag=GCA000010485_03255;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA000010485_03255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_000829818.1,SO:0001217,UniParc:UPI00001654FE,UniRef:UniRef100_A8AQC0,UniRef:UniRef50_P66643,UniRef:UniRef90_A4WF42
contig_1	Pyrodigal	gene	3328825	3329253	.	-	.	ID=GCA000010485_03256_gene;locus_tag=GCA000010485_03256;gene=rplM
contig_1	Pyrodigal	CDS	3328825	3329253	.	-	0	ID=GCA000010485_03256;Name=50S ribosomal protein L13;locus_tag=GCA000010485_03256;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA000010485_03256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,RefSeq:WP_000847559.1,SO:0001217,UniParc:UPI000005A528,UniRef:UniRef100_P0AA10,UniRef:UniRef50_P0AA10,UniRef:UniRef90_P0AA10
contig_1	Pyrodigal	gene	3329473	3330600	.	-	.	ID=GCA000010485_03257_gene;locus_tag=GCA000010485_03257;gene=zapE
contig_1	Pyrodigal	CDS	3329473	3330600	.	-	0	ID=GCA000010485_03257;Name=cell division protein ZapE;locus_tag=GCA000010485_03257;product=cell division protein ZapE;Dbxref=GO:0005524,GO:0005543,GO:0005737,GO:0016887,GO:0032153,GO:0051301;gene=zapE;Parent=GCA000010485_03257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001192332,COG:COG1485,COG:D,RefSeq:WP_001192301.1,SO:0001217,UniParc:UPI0001C22C75,UniRef:UniRef100_A0A066SYN8,UniRef:UniRef50_P64612,UniRef:UniRef90_P64612
contig_1	Pyrodigal	gene	3330794	3331192	.	+	.	ID=GCA000010485_03258_gene;locus_tag=GCA000010485_03258;gene=zapG
contig_1	Pyrodigal	CDS	3330794	3331192	.	+	0	ID=GCA000010485_03258;Name=Z-ring associated protein ZapG;locus_tag=GCA000010485_03258;product=Z-ring associated protein ZapG;Dbxref=GO:0005886,GO:0008360,GO:0051301;gene=zapG;Parent=GCA000010485_03258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3105,COG:D,KEGG:K09908,RefSeq:WP_001295270.1,SO:0001217,UniParc:UPI00005F03E5,UniRef:UniRef100_P0ADW3,UniRef:UniRef50_P0ADW3,UniRef:UniRef90_P0ADW3
contig_1	Pyrodigal	gene	3331346	3332713	.	+	.	ID=GCA000010485_03259_gene;locus_tag=GCA000010485_03259;gene=degQ
contig_1	Pyrodigal	CDS	3331346	3332713	.	+	0	ID=GCA000010485_03259;Name=serine endoprotease DegQ;locus_tag=GCA000010485_03259;product=serine endoprotease DegQ;Dbxref=GO:0004252,GO:0005515,GO:0006508,GO:0006515,GO:0008233,GO:0042597,GO:0042802,GO:0051603;gene=degQ;Parent=GCA000010485_03259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_001296452.1,SO:0001217,UniParc:UPI000188791E,UniRef:UniRef100_A0A061KHZ9,UniRef:UniRef50_P39099,UniRef:UniRef90_P39099;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	3332803	3333870	.	+	.	ID=GCA000010485_03260_gene;locus_tag=GCA000010485_03260;gene=degS
contig_1	Pyrodigal	CDS	3332803	3333870	.	+	0	ID=GCA000010485_03260;Name=outer membrane-stress sensor serine endopeptidase DegS;locus_tag=GCA000010485_03260;product=outer membrane-stress sensor serine endopeptidase DegS;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0008233,GO:0008236,GO:0030288,GO:0042802,GO:0071218;gene=degS;Parent=GCA000010485_03260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_000497726.1,SO:0001217,UniParc:UPI00000E4A7B,UniRef:UniRef100_E2QER1,UniRef:UniRef50_P0AEE3,UniRef:UniRef90_P0AEE3;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	3333933	3334871	.	-	.	ID=GCA000010485_03261_gene;locus_tag=GCA000010485_03261;gene=mdh
contig_1	Pyrodigal	CDS	3333933	3334871	.	-	0	ID=GCA000010485_03261;Name=malate dehydrogenase;locus_tag=GCA000010485_03261;product=malate dehydrogenase;Dbxref=GO:0005737,GO:0006099,GO:0006108,GO:0030060;gene=mdh;Parent=GCA000010485_03261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_001295272.1,SO:0001217,UniParc:UPI000012EE3B,UniRef:UniRef100_P61889,UniRef:UniRef50_P61889,UniRef:UniRef90_P61889;ec_number=1.1.1.37
contig_1	Pyrodigal	gene	3335306	3335776	.	+	.	ID=GCA000010485_03262_gene;locus_tag=GCA000010485_03262;gene=argR
contig_1	Pyrodigal	CDS	3335306	3335776	.	+	0	ID=GCA000010485_03262;Name=transcriptional regulator ArgR;locus_tag=GCA000010485_03262;product=transcriptional regulator ArgR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=argR;Parent=GCA000010485_03262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_001257847.1,SO:0001217,UniParc:UPI00000DF101,UniRef:UniRef100_B7UJW9,UniRef:UniRef50_P0A6D0,UniRef:UniRef90_P0A6D0
contig_1	Pyrodigal	gene	3336140	3336403	.	+	.	ID=GCA000010485_03263_gene;locus_tag=GCA000010485_03263;gene=yhcN
contig_1	Pyrodigal	CDS	3336140	3336403	.	+	0	ID=GCA000010485_03263;Name=peroxide/acid stress response protein YhcN;locus_tag=GCA000010485_03263;product=peroxide/acid stress response protein YhcN;Dbxref=GO:0042597,GO:0044011,GO:0070301,GO:0071468;gene=yhcN;Parent=GCA000010485_03263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000695690.1,SO:0001217,UniParc:UPI000013B1E0,UniRef:UniRef100_P64614,UniRef:UniRef50_P64614,UniRef:UniRef90_P64614
contig_1	Pyrodigal	gene	3336458	3336730	.	-	.	ID=GCA000010485_03264_gene;locus_tag=GCA000010485_03264;gene=yhcO
contig_1	Pyrodigal	CDS	3336458	3336730	.	-	0	ID=GCA000010485_03264;Name=putative protein YhcO;locus_tag=GCA000010485_03264;product=putative protein YhcO;gene=yhcO;Parent=GCA000010485_03264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2732,COG:K,KEGG:K03623,RefSeq:WP_001029013.1,SO:0001217,UniParc:UPI000013B1E1,UniRef:UniRef100_P64616,UniRef:UniRef50_P64616,UniRef:UniRef90_P64616
contig_1	Pyrodigal	gene	3336822	3338789	.	-	.	ID=GCA000010485_03265_gene;locus_tag=GCA000010485_03265;gene=aaeB
contig_1	Pyrodigal	CDS	3336822	3338789	.	-	0	ID=GCA000010485_03265;Name=p-hydroxybenzoic acid efflux pump subunit AaeB;locus_tag=GCA000010485_03265;product=p-hydroxybenzoic acid efflux pump subunit AaeB;Dbxref=GO:0005886,GO:0022857,GO:0046942,GO:0055085;gene=aaeB;Parent=GCA000010485_03265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_000510964.1,SO:0001217,UniParc:UPI0000D50CBF,UniRef:UniRef100_B7UJX2,UniRef:UniRef50_P46481,UniRef:UniRef90_P46481
contig_1	Pyrodigal	gene	3338795	3339727	.	-	.	ID=GCA000010485_03266_gene;locus_tag=GCA000010485_03266;gene=aaeA
contig_1	Pyrodigal	CDS	3338795	3339727	.	-	0	ID=GCA000010485_03266;Name=p-hydroxybenzoic acid efflux pump subunit AaeA;locus_tag=GCA000010485_03266;product=p-hydroxybenzoic acid efflux pump subunit AaeA;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=aaeA;Parent=GCA000010485_03266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,KEGG:K15548,RefSeq:WP_000854033.1,SO:0001217,UniParc:UPI00000DF103,UniRef:UniRef100_B7UJX3,UniRef:UniRef50_P46482,UniRef:UniRef90_P46482
contig_1	Pyrodigal	gene	3339735	3339938	.	-	.	ID=GCA000010485_03267_gene;locus_tag=GCA000010485_03267;gene=aaeX
contig_1	Pyrodigal	CDS	3339735	3339938	.	-	0	ID=GCA000010485_03267;Name=p-hydroxybenzoic acid efflux pump operon protein AaeX;locus_tag=GCA000010485_03267;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;Dbxref=GO:0005886;gene=aaeX;Parent=GCA000010485_03267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21695,RefSeq:WP_000051841.1,SO:0001217,UniParc:UPI00005EE28B,UniRef:UniRef100_P46478,UniRef:UniRef50_P46478,UniRef:UniRef90_P46478
contig_1	Pyrodigal	gene	3340121	3341050	.	+	.	ID=GCA000010485_03268_gene;locus_tag=GCA000010485_03268;gene=aaeR
contig_1	Pyrodigal	CDS	3340121	3341050	.	+	0	ID=GCA000010485_03268;Name=HTH-type transcriptional activator AaeR;locus_tag=GCA000010485_03268;product=HTH-type transcriptional activator AaeR;Dbxref=GO:0000976,GO:0003700,GO:0006351,GO:0006352,GO:0006355,GO:0045893;gene=aaeR;Parent=GCA000010485_03268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K21698,RefSeq:WP_000440317.1,SO:0001217,UniParc:UPI000013B1E5,UniRef:UniRef100_P67662,UniRef:UniRef50_P67662,UniRef:UniRef90_P67662
contig_1	Pyrodigal	gene	3341172	3342617	.	-	.	ID=GCA000010485_03269_gene;locus_tag=GCA000010485_03269;gene=tldD
contig_1	Pyrodigal	CDS	3341172	3342617	.	-	0	ID=GCA000010485_03269;Name=metalloprotease TldD;locus_tag=GCA000010485_03269;product=metalloprotease TldD;Dbxref=GO:0005829,GO:0006508,GO:0008237;gene=tldD;Parent=GCA000010485_03269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,KEGG:K03568,RefSeq:WP_000055910.1,SO:0001217,UniParc:UPI0001C22C76,UniRef:UniRef100_A0A066SQ03,UniRef:UniRef50_P0AGG8,UniRef:UniRef90_P0AGG8;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	3342773	3346573	.	-	.	ID=GCA000010485_03270_gene;locus_tag=GCA000010485_03270;gene=yhdP
contig_1	Pyrodigal	CDS	3342773	3346573	.	-	0	ID=GCA000010485_03270;Name=AsmA2 domain-containing protein YhdP;locus_tag=GCA000010485_03270;product=AsmA2 domain-containing protein YhdP;Dbxref=GO:0005886,GO:0015914;gene=yhdP;Parent=GCA000010485_03270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3164,COG:M,RefSeq:WP_001253634.1,SO:0001217,UniParc:UPI0001C22CA4,UniRef:UniRef100_A0A061YKW2,UniRef:UniRef50_P46474,UniRef:UniRef90_P46474
contig_1	Pyrodigal	gene	3346641	3348110	.	-	.	ID=GCA000010485_03271_gene;locus_tag=GCA000010485_03271;gene=rng
contig_1	Pyrodigal	CDS	3346641	3348110	.	-	0	ID=GCA000010485_03271;Name=ribonuclease G;locus_tag=GCA000010485_03271;product=ribonuclease G;Dbxref=GO:0000049,GO:0003723,GO:0004519,GO:0004540,GO:0005737,GO:0006364,GO:0006396,GO:0008033,GO:0019843,GO:0046872;gene=rng;Parent=GCA000010485_03271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,RefSeq:WP_000123197.1,SO:0001217,UniParc:UPI00001654FF,UniRef:UniRef100_P0A9J0,UniRef:UniRef50_P0A9J0,UniRef:UniRef90_P0A9J0;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	3348100	3348693	.	-	.	ID=GCA000010485_03272_gene;locus_tag=GCA000010485_03272;gene=yhdE
contig_1	Pyrodigal	CDS	3348100	3348693	.	-	0	ID=GCA000010485_03272;Name=nucleoside triphosphate pyrophosphatase YhdE;locus_tag=GCA000010485_03272;product=nucleoside triphosphate pyrophosphatase YhdE;Dbxref=GO:0005737,GO:0009117,GO:0106379;gene=yhdE;Parent=GCA000010485_03272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000203105,COG:COG0424,COG:Q,RefSeq:WP_000203095.1,SO:0001217,UniParc:UPI00000DF106,UniRef:UniRef100_Q8FD47,UniRef:UniRef50_P25536,UniRef:UniRef90_P25536;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	3348702	3349190	.	-	.	ID=GCA000010485_03273_gene;locus_tag=GCA000010485_03273;gene=mreD
contig_1	Pyrodigal	CDS	3348702	3349190	.	-	0	ID=GCA000010485_03273;Name=rod shape-determining protein MreD;locus_tag=GCA000010485_03273;product=rod shape-determining protein MreD;Dbxref=GO:0005886,GO:0008360,GO:0009252;gene=mreD;Parent=GCA000010485_03273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_000179409.1,SO:0001217,UniParc:UPI000012F562,UniRef:UniRef100_P0ABH4,UniRef:UniRef50_P0ABH4,UniRef:UniRef90_P0ABH4
contig_1	Pyrodigal	gene	3349190	3350293	.	-	.	ID=GCA000010485_03274_gene;locus_tag=GCA000010485_03274;gene=mreC
contig_1	Pyrodigal	CDS	3349190	3350293	.	-	0	ID=GCA000010485_03274;Name=rod shape-determining protein MreC;locus_tag=GCA000010485_03274;product=rod shape-determining protein MreC;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0071963;gene=mreC;Parent=GCA000010485_03274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_000802518.1,SO:0001217,UniParc:UPI00000DF108,UniRef:UniRef100_A0A067HC27,UniRef:UniRef50_P16926,UniRef:UniRef90_P16926
contig_1	Pyrodigal	gene	3350359	3351402	.	-	.	ID=GCA000010485_03275_gene;locus_tag=GCA000010485_03275;gene=mreB
contig_1	Pyrodigal	CDS	3350359	3351402	.	-	0	ID=GCA000010485_03275;Name=rod shape-determining protein MreB;locus_tag=GCA000010485_03275;product=rod shape-determining protein MreB;Dbxref=GO:0000902,GO:0005524,GO:0005737,GO:0008360;gene=mreB;Parent=GCA000010485_03275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000466737,BlastRules:WP_000913396,BlastRules:WP_003094393,BlastRules:WP_003229650,COG:COG1077,COG:DZ,RefSeq:WP_000913396.1,SO:0001217,UniParc:UPI000005A541,UniRef:UniRef100_P0A9X4,UniRef:UniRef50_P0A9X4,UniRef:UniRef90_P0A9X4
contig_1	Pyrodigal	gene	3351707	3353647	.	-	.	ID=GCA000010485_03276_gene;locus_tag=GCA000010485_03276;gene=csrD
contig_1	Pyrodigal	CDS	3351707	3353647	.	-	0	ID=GCA000010485_03276;Name=RNase E specificity factor CsrD;locus_tag=GCA000010485_03276;product=RNase E specificity factor CsrD;Dbxref=GO:0005886,GO:0006401,GO:0032991,GO:0042802,GO:0051252,GO:0071111;gene=csrD;Parent=GCA000010485_03276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2200,COG:T,KEGG:K18765,RefSeq:WP_001241393.1,SO:0001217,UniParc:UPI0001C22CA5,UniRef:UniRef100_A0A066SXY4,UniRef:UniRef50_P13518,UniRef:UniRef90_P13518
contig_1	Pyrodigal	gene	3353799	3354773	.	+	.	ID=GCA000010485_03277_gene;locus_tag=GCA000010485_03277;gene=acuI
contig_1	Pyrodigal	CDS	3353799	3354773	.	+	0	ID=GCA000010485_03277;Name=putative acrylyl-CoA reductase AcuI;locus_tag=GCA000010485_03277;product=putative acrylyl-CoA reductase AcuI;Dbxref=GO:0005737,GO:0042803,GO:0043957;gene=acuI;Parent=GCA000010485_03277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_001148474.1,SO:0001217,UniParc:UPI0001C22CA6,UniRef:UniRef100_A0A066SYQ6,UniRef:UniRef50_P26646,UniRef:UniRef90_P26646;ec_number=1.3.1.84
contig_1	Pyrodigal	gene	3355750	3356220	.	+	.	ID=GCA000010485_03278_gene;locus_tag=GCA000010485_03278;gene=accB
contig_1	Pyrodigal	CDS	3355750	3356220	.	+	0	ID=GCA000010485_03278;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA000010485_03278;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA000010485_03278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_000354622.1,SO:0001217,UniParc:UPI00000480B6,UniRef:UniRef100_P0ABD8,UniRef:UniRef50_P0ABD8,UniRef:UniRef90_P0ABD8;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	3356231	3357580	.	+	.	ID=GCA000010485_03279_gene;locus_tag=GCA000010485_03279;gene=accC
contig_1	Pyrodigal	CDS	3356231	3357580	.	+	0	ID=GCA000010485_03279;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000010485_03279;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0003989,GO:0004075,GO:0005524,GO:0005737,GO:0005829,GO:0006633,GO:0009317,GO:0016874,GO:0042803,GO:0045717,GO:0046872,GO:2001295;gene=accC;Parent=GCA000010485_03279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_000884645.1,SO:0001217,UniParc:UPI00005EFC0F,UniRef:UniRef100_A0A067HC32,UniRef:UniRef50_P24182,UniRef:UniRef90_P24182;ec_number=6.3.4.14
contig_1	Pyrodigal	gene	3357672	3358718	.	-	.	ID=GCA000010485_03280_gene;locus_tag=GCA000010485_03280
contig_1	Pyrodigal	CDS	3357672	3358718	.	-	0	ID=GCA000010485_03280;Name=DUF4432 domain-containing protein;locus_tag=GCA000010485_03280;product=DUF4432 domain-containing protein;Parent=GCA000010485_03280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000787058.1,SO:0001217,UniParc:UPI0001C22CA8,UniRef:UniRef100_A0A061YKX4,UniRef:UniRef50_A0A0H3EMD1,UniRef:UniRef90_A0A0H3EMD1
contig_1	Pyrodigal	gene	3358715	3359677	.	-	.	ID=GCA000010485_03281_gene;locus_tag=GCA000010485_03281
contig_1	Pyrodigal	CDS	3358715	3359677	.	-	0	ID=GCA000010485_03281;Name=Sugar kinase;locus_tag=GCA000010485_03281;product=Sugar kinase;Parent=GCA000010485_03281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21621,RefSeq:WP_000048611.1,SO:0001217,UniParc:UPI000004394A,UniRef:UniRef100_E2QET2,UniRef:UniRef50_E2QET2,UniRef:UniRef90_E2QET2;ec_number=2.7.1.101
contig_1	Pyrodigal	gene	3359699	3360688	.	-	.	ID=GCA000010485_03282_gene;locus_tag=GCA000010485_03282
contig_1	Pyrodigal	CDS	3359699	3360688	.	-	0	ID=GCA000010485_03282;Name=ABC transporter permease;locus_tag=GCA000010485_03282;product=ABC transporter permease;Parent=GCA000010485_03282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000137057.1,SO:0001217,UniParc:UPI0001C22CA9,UniRef:UniRef100_A0A061YNE9,UniRef:UniRef50_A9BW03,UniRef:UniRef90_A0A0H0N547
contig_1	Pyrodigal	gene	3360689	3362188	.	-	.	ID=GCA000010485_03283_gene;locus_tag=GCA000010485_03283
contig_1	Pyrodigal	CDS	3360689	3362188	.	-	0	ID=GCA000010485_03283;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000010485_03283;product=ATP-binding cassette domain-containing protein;Parent=GCA000010485_03283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000132912.1,SO:0001217,UniParc:UPI00005EFC0C,UniRef:UniRef100_E2QET4,UniRef:UniRef50_A0A4Y8MHB1,UniRef:UniRef90_E2QET4
contig_1	Pyrodigal	gene	3362249	3363139	.	-	.	ID=GCA000010485_03284_gene;locus_tag=GCA000010485_03284;gene=rbsB
contig_1	Pyrodigal	CDS	3362249	3363139	.	-	0	ID=GCA000010485_03284;Name=Ribose ABC transporter;locus_tag=GCA000010485_03284;product=Ribose ABC transporter;gene=rbsB;Parent=GCA000010485_03284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_001296455.1,SO:0001217,UniParc:UPI0002185989,UniRef:UniRef100_A0A061KI22,UniRef:UniRef50_A0A0F3VBA2,UniRef:UniRef90_A0A0F3VBA2
contig_1	Pyrodigal	gene	3363175	3364029	.	-	.	ID=GCA000010485_03285_gene;locus_tag=GCA000010485_03285
contig_1	Pyrodigal	CDS	3363175	3364029	.	-	0	ID=GCA000010485_03285;Name=tagatose bisphosphate family class II aldolase;locus_tag=GCA000010485_03285;product=tagatose bisphosphate family class II aldolase;Dbxref=GO:0005975,GO:0008270,GO:0009025;Parent=GCA000010485_03285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01624,RefSeq:WP_000275542.1,SO:0001217,UniParc:UPI0001C22CAC,UniRef:UniRef100_A0A061YKZ8,UniRef:UniRef50_P0C8J6,UniRef:UniRef90_A0A0F3VBR0;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	3364385	3365200	.	+	.	ID=GCA000010485_03286_gene;locus_tag=GCA000010485_03286;gene=deoR
contig_1	Pyrodigal	CDS	3364385	3365200	.	+	0	ID=GCA000010485_03286;Name=DeoR family regulatory protein;locus_tag=GCA000010485_03286;product=DeoR family regulatory protein;gene=deoR;Parent=GCA000010485_03286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000209A7EE,UniRef:UniRef100_A0AAF0SKW0,UniRef:UniRef50_A0A135XVI0,UniRef:UniRef90_A0A135XVI0
contig_1	Pyrodigal	gene	3365211	3366167	.	+	.	ID=GCA000010485_03287_gene;locus_tag=GCA000010485_03287;gene=pfkB
contig_1	Pyrodigal	CDS	3365211	3366167	.	+	0	ID=GCA000010485_03287;Name=Carbohydrate kinase PfkB domain-containing protein;locus_tag=GCA000010485_03287;product=Carbohydrate kinase PfkB domain-containing protein;gene=pfkB;Parent=GCA000010485_03287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A486N825,UniRef:UniRef90_A0A0H2Z473
contig_1	Pyrodigal	gene	3366260	3366502	.	+	.	ID=GCA000010485_03288_gene;locus_tag=GCA000010485_03288;gene=yhdT
contig_1	Pyrodigal	CDS	3366260	3366502	.	+	0	ID=GCA000010485_03288;Name=putative membrane protein YhdT;locus_tag=GCA000010485_03288;product=putative membrane protein YhdT;Dbxref=GO:0005886;gene=yhdT;Parent=GCA000010485_03288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3924,COG:S,RefSeq:WP_001296458.1,SO:0001217,UniParc:UPI0001C22CAE,UniRef:UniRef100_A0A066SXZ5,UniRef:UniRef50_P45566,UniRef:UniRef90_P45566
contig_1	Pyrodigal	gene	3366492	3367943	.	+	.	ID=GCA000010485_03289_gene;locus_tag=GCA000010485_03289;gene=panF
contig_1	Pyrodigal	CDS	3366492	3367943	.	+	0	ID=GCA000010485_03289;Name=sodium/pantothenate symporter;locus_tag=GCA000010485_03289;product=sodium/pantothenate symporter;Dbxref=GO:0005886,GO:0015081,GO:0015233,GO:0015293,GO:0015887,GO:0016020,GO:0036376;gene=panF;Parent=GCA000010485_03289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4145,COG:H,KEGG:K14392,RefSeq:WP_001175716.1,SO:0001217,UniParc:UPI0001886672,UniRef:UniRef100_E2QEU0,UniRef:UniRef50_P16256,UniRef:UniRef90_P16256
contig_1	Pyrodigal	gene	3367955	3368836	.	+	.	ID=GCA000010485_03290_gene;locus_tag=GCA000010485_03290;gene=prmA
contig_1	Pyrodigal	CDS	3367955	3368836	.	+	0	ID=GCA000010485_03290;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA000010485_03290;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0005829,GO:0008757,GO:0016279,GO:0032259,GO:0036211,GO:0042054;gene=prmA;Parent=GCA000010485_03290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2264,COG:J,RefSeq:WP_001145827.1,SO:0001217,UniParc:UPI000013225C,UniRef:UniRef100_P0A8T1,UniRef:UniRef50_P0A8T1,UniRef:UniRef90_P0A8T1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3369165	3370130	.	+	.	ID=GCA000010485_03291_gene;locus_tag=GCA000010485_03291;gene=dusB
contig_1	Pyrodigal	CDS	3369165	3370130	.	+	0	ID=GCA000010485_03291;Name=tRNA dihydrouridine synthase DusB;locus_tag=GCA000010485_03291;product=tRNA dihydrouridine synthase DusB;Dbxref=GO:0000049,GO:0008033,GO:0010181,GO:0017150,GO:0050660;gene=dusB;Parent=GCA000010485_03291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_001219652.1,SO:0001217,UniParc:UPI000013B1EF,UniRef:UniRef100_P0ABT5,UniRef:UniRef50_P0ABT5,UniRef:UniRef90_P0ABT5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	3370156	3370452	.	+	.	ID=GCA000010485_03292_gene;locus_tag=GCA000010485_03292;gene=fis
contig_1	Pyrodigal	CDS	3370156	3370452	.	+	0	ID=GCA000010485_03292;Name=DNA-binding transcriptional regulator Fis;locus_tag=GCA000010485_03292;product=DNA-binding transcriptional regulator Fis;Dbxref=GO:0003700,GO:0043565;gene=fis;Parent=GCA000010485_03292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2901,COG:K,RefSeq:WP_000462905.1,SO:0001217,UniParc:UPI0000006216,UniRef:UniRef100_A8AQG0,UniRef:UniRef50_P57902,UniRef:UniRef90_Q8ZAX8
contig_1	Pyrodigal	gene	3370537	3371421	.	+	.	ID=GCA000010485_03293_gene;locus_tag=GCA000010485_03293;gene=yhdJ
contig_1	Pyrodigal	CDS	3370537	3371421	.	+	0	ID=GCA000010485_03293;Name=adenine-specific DNA-methyltransferase;locus_tag=GCA000010485_03293;product=adenine-specific DNA-methyltransferase;Dbxref=GO:0003677,GO:0005737,GO:0008170,GO:0009007,GO:0032259;gene=yhdJ;Parent=GCA000010485_03293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001258951.1,SO:0001217,UniParc:UPI0000E451A7,UniRef:UniRef100_E2QEU4,UniRef:UniRef50_P28638,UniRef:UniRef90_P28638;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	3371505	3371684	.	+	.	ID=GCA000010485_03294_gene;locus_tag=GCA000010485_03294;gene=yhdU
contig_1	Pyrodigal	CDS	3371505	3371684	.	+	0	ID=GCA000010485_03294;Name=Inner membrane protein YhdU;locus_tag=GCA000010485_03294;product=Inner membrane protein YhdU;Dbxref=GO:0005886;gene=yhdU;Parent=GCA000010485_03294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295275.1,SO:0001217,UniParc:UPI000013B1FD,UniRef:UniRef100_P64619,UniRef:UniRef50_P64619,UniRef:UniRef90_P64619
contig_1	Pyrodigal	gene	3371687	3372349	.	-	.	ID=GCA000010485_03295_gene;locus_tag=GCA000010485_03295;gene=acrS
contig_1	Pyrodigal	CDS	3371687	3372349	.	-	0	ID=GCA000010485_03295;Name=multidrug efflux transporter transcriptional repressor AcrS;locus_tag=GCA000010485_03295;product=multidrug efflux transporter transcriptional repressor AcrS;Dbxref=GO:0003677,GO:0003700,GO:0009410,GO:0045892;gene=acrS;Parent=GCA000010485_03295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001129518,RefSeq:WP_001129506.1,SO:0001217,UniParc:UPI0000D50CCF,UniRef:UniRef100_A0A061LCK4,UniRef:UniRef50_P0ACT2,UniRef:UniRef90_P0ACT2
contig_1	Pyrodigal	gene	3372748	3373905	.	+	.	ID=GCA000010485_03296_gene;locus_tag=GCA000010485_03296;gene=acrE
contig_1	Pyrodigal	CDS	3372748	3373905	.	+	0	ID=GCA000010485_03296;Name=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;locus_tag=GCA000010485_03296;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;Dbxref=GO:0005886,GO:0009410,GO:0022857,GO:0046677,GO:0098567,GO:0140330,GO:1990281;gene=acrE;Parent=GCA000010485_03296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000160334,KEGG:K18141,RefSeq:WP_000160349.1,SO:0001217,UniParc:UPI00000E4A7C,UniRef:UniRef100_A0A066SQ29,UniRef:UniRef50_P0AE06,UniRef:UniRef90_P24180
contig_1	Pyrodigal	gene	3373917	3377021	.	+	.	ID=GCA000010485_03297_gene;locus_tag=GCA000010485_03297;gene=acrF
contig_1	Pyrodigal	CDS	3373917	3377021	.	+	0	ID=GCA000010485_03297;Name=multidrug efflux RND transporter permease subunit AcrF;locus_tag=GCA000010485_03297;product=multidrug efflux RND transporter permease subunit AcrF;Dbxref=GO:0005886,GO:0015562,GO:0042910,GO:0098567,GO:0140330,GO:1990281;gene=acrF;Parent=GCA000010485_03297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001273238,NCBIProtein:AAC76298.1,RefSeq:WP_001273258.1,SO:0001217,UniParc:UPI0001C22CAF,UniRef:UniRef100_A0A7I0KZH9,UniRef:UniRef50_P31224,UniRef:UniRef90_P24181
contig_1	Pyrodigal	gene	3377274	3377495	.	+	.	ID=GCA000010485_03298_gene;locus_tag=GCA000010485_03298;gene=yhdV
contig_1	Pyrodigal	CDS	3377274	3377495	.	+	0	ID=GCA000010485_03298;Name=putative protein YhdV;locus_tag=GCA000010485_03298;product=putative protein YhdV;Dbxref=GO:0005886;gene=yhdV;Parent=GCA000010485_03298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825639.1,SO:0001217,UniParc:UPI000013B1FE,UniRef:UniRef100_P64622,UniRef:UniRef50_P64622,UniRef:UniRef90_P64622
contig_1	Pyrodigal	gene	3377926	3378951	.	+	.	ID=GCA000010485_03299_gene;locus_tag=GCA000010485_03299;gene=yhdW
contig_1	Pyrodigal	CDS	3377926	3378951	.	+	0	ID=GCA000010485_03299;Name=Putative amino-acid ABC transporter-binding protein YhdW;locus_tag=GCA000010485_03299;product=Putative amino-acid ABC transporter-binding protein YhdW;Dbxref=GO:0006865,GO:0015833,GO:0016020,GO:0030288,GO:0055052;gene=yhdW;Parent=GCA000010485_03299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,KEGG:K09969,RefSeq:WP_000738587.1,SO:0001217,UniParc:UPI000218598A,UniRef:UniRef100_A0A061YH54,UniRef:UniRef50_P45766,UniRef:UniRef90_P45766
contig_1	Pyrodigal	gene	3379019	3380200	.	+	.	ID=GCA000010485_03300_gene;locus_tag=GCA000010485_03300;gene=yhdX
contig_1	Pyrodigal	CDS	3379019	3380200	.	+	0	ID=GCA000010485_03300;Name=Putative amino-acid ABC transporter permease protein YhdX;locus_tag=GCA000010485_03300;product=Putative amino-acid ABC transporter permease protein YhdX;Dbxref=GO:0005886,GO:0006865,GO:0015833,GO:0016020,GO:0022857,GO:0055052;gene=yhdX;Parent=GCA000010485_03300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001120549.1,SO:0001217,UniParc:UPI000218598B,UniRef:UniRef100_A0A061YL19,UniRef:UniRef50_P45767,UniRef:UniRef90_P45767
contig_1	Pyrodigal	gene	3380210	3381313	.	+	.	ID=GCA000010485_03301_gene;locus_tag=GCA000010485_03301;gene=yhdY
contig_1	Pyrodigal	CDS	3380210	3381313	.	+	0	ID=GCA000010485_03301;Name=Inner membrane amino-acid ABC transporter permease protein YhdY;locus_tag=GCA000010485_03301;product=Inner membrane amino-acid ABC transporter permease protein YhdY;Dbxref=GO:0005886,GO:0006865,GO:0015833,GO:0016020,GO:0022857,GO:0055052;gene=yhdY;Parent=GCA000010485_03301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,RefSeq:WP_001296459.1,SO:0001217,UniParc:UPI0001E8AF97,UniRef:UniRef100_A0A066SQ34,UniRef:UniRef50_P45768,UniRef:UniRef90_P45768
contig_1	Pyrodigal	gene	3381321	3382079	.	+	.	ID=GCA000010485_03302_gene;locus_tag=GCA000010485_03302;gene=yhdZ
contig_1	Pyrodigal	CDS	3381321	3382079	.	+	0	ID=GCA000010485_03302;Name=putative amino-acid ABC transporter ATP-binding protein YhdZ;locus_tag=GCA000010485_03302;product=putative amino-acid ABC transporter ATP-binding protein YhdZ;Dbxref=GO:0005524,GO:0015424,GO:0015833,GO:0016020,GO:0016887,GO:0043190,GO:0055052;gene=yhdZ;Parent=GCA000010485_03302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_000078344.1,SO:0001217,UniParc:UPI00005EFBFD,UniRef:UniRef100_A0A023KU88,UniRef:UniRef50_P45769,UniRef:UniRef90_P45769
contig_1	Infernal	gene	3382142	3382257	.	-	.	ID=GCA000010485_03303_gene;locus_tag=GCA000010485_03303;gene=rrf
contig_1	Infernal	rRNA	3382142	3382257	7.4e-15	-	.	ID=GCA000010485_03303;Name=5S ribosomal RNA;locus_tag=GCA000010485_03303;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_03303_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	3382297	3382372	.	-	.	ID=GCA000010485_03304_gene;locus_tag=GCA000010485_03304;gene=trnT
contig_1	tRNAscan-SE	tRNA	3382297	3382372	.	-	.	ID=GCA000010485_03304;Name=tRNA-Thr(ggt);locus_tag=GCA000010485_03304;product=tRNA-Thr(ggt);gene=trnT;anti_codon=ggt;amino_acid=Thr;Parent=GCA000010485_03304_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Infernal	gene	3382387	3382502	.	-	.	ID=GCA000010485_03305_gene;locus_tag=GCA000010485_03305;gene=rrf
contig_1	Infernal	rRNA	3382387	3382502	2e-15	-	.	ID=GCA000010485_03305;Name=5S ribosomal RNA;locus_tag=GCA000010485_03305;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_03305_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	3382605	3385508	.	-	.	ID=GCA000010485_03306_gene;locus_tag=GCA000010485_03306;gene=rrl
contig_1	Infernal	rRNA	3382605	3385508	5.4e-06	-	.	ID=GCA000010485_03306;Name=23S ribosomal RNA;locus_tag=GCA000010485_03306;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_03306_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	3385516	3385624	.	-	.	ID=GCA000010485_03307_gene;locus_tag=GCA000010485_03307;gene=StyR-44
contig_1	Infernal	ncRNA	3385516	3385624	9.2e-22	-	.	ID=GCA000010485_03307;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_03307;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_03307_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	tRNAscan-SE	gene	3385691	3385766	.	-	.	ID=GCA000010485_03308_gene;locus_tag=GCA000010485_03308;gene=trnA
contig_1	tRNAscan-SE	tRNA	3385691	3385766	.	-	.	ID=GCA000010485_03308;Name=tRNA-Ala(tgc);locus_tag=GCA000010485_03308;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000010485_03308_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	3385809	3385885	.	-	.	ID=GCA000010485_03309_gene;locus_tag=GCA000010485_03309;gene=trnI
contig_1	tRNAscan-SE	tRNA	3385809	3385885	.	-	.	ID=GCA000010485_03309;Name=tRNA-Ile(gat);locus_tag=GCA000010485_03309;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000010485_03309_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	3385954	3387495	.	-	.	ID=GCA000010485_03310_gene;locus_tag=GCA000010485_03310;gene=rrs
contig_1	Infernal	rRNA	3385954	3387495	6.6e-48	-	.	ID=GCA000010485_03310;Name=16S ribosomal RNA;locus_tag=GCA000010485_03310;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_03310_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	3387966	3388520	.	+	.	ID=GCA000010485_03311_gene;locus_tag=GCA000010485_03311;gene=yrdA
contig_1	Pyrodigal	CDS	3387966	3388520	.	+	0	ID=GCA000010485_03311;Name=Protein YrdA;locus_tag=GCA000010485_03311;product=Protein YrdA;Dbxref=GO:0005829,GO:0008270,GO:0032991,GO:0042802;gene=yrdA;Parent=GCA000010485_03311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01726,RefSeq:WP_000005712.1,SO:0001217,UniParc:UPI0001E8AF99,UniRef:UniRef100_A0A066SUT9,UniRef:UniRef50_P0A9W9,UniRef:UniRef90_P0A9W9;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3388496	3388753	.	-	.	ID=GCA000010485_03312_gene;locus_tag=GCA000010485_03312;gene=yrdB
contig_1	Pyrodigal	CDS	3388496	3388753	.	-	0	ID=GCA000010485_03312;Name=putative protein YrdB;locus_tag=GCA000010485_03312;product=putative protein YrdB;gene=yrdB;Parent=GCA000010485_03312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001070565.1,SO:0001217,UniParc:UPI0001C22CE4,UniRef:UniRef100_A0A061YFU1,UniRef:UniRef50_P45795,UniRef:UniRef90_P45795
contig_1	Pyrodigal	gene	3388750	3389568	.	-	.	ID=GCA000010485_03313_gene;locus_tag=GCA000010485_03313;gene=aroE
contig_1	Pyrodigal	CDS	3388750	3389568	.	-	0	ID=GCA000010485_03313;Name=shikimate dehydrogenase;locus_tag=GCA000010485_03313;product=shikimate dehydrogenase;Dbxref=GO:0004764,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0050661;gene=aroE;Parent=GCA000010485_03313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_000451255.1,SO:0001217,UniParc:UPI0001C22CE5,UniRef:UniRef100_A0A066SR61,UniRef:UniRef50_P15770,UniRef:UniRef90_P15770;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	3389573	3390145	.	-	.	ID=GCA000010485_03314_gene;locus_tag=GCA000010485_03314;gene=tsaC
contig_1	Pyrodigal	CDS	3389573	3390145	.	-	0	ID=GCA000010485_03314;Name=L-threonylcarbamoyladenylate synthase type 1 TsaC;locus_tag=GCA000010485_03314;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;Dbxref=GO:0000049,GO:0002949,GO:0003725,GO:0005524,GO:0005737,GO:0006450,GO:0061710;gene=tsaC;Parent=GCA000010485_03314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296460.1,SO:0001217,UniParc:UPI000181EF58,UniRef:UniRef100_Q8FD17,UniRef:UniRef50_P45748,UniRef:UniRef90_Q8FD17;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	3390150	3390692	.	-	.	ID=GCA000010485_03315_gene;locus_tag=GCA000010485_03315;gene=yrdD
contig_1	Pyrodigal	CDS	3390150	3390692	.	-	0	ID=GCA000010485_03315;Name=putative protein YrdD;locus_tag=GCA000010485_03315;product=putative protein YrdD;Dbxref=GO:0003697,GO:0003917,GO:0005506,GO:0005694,GO:0006265,GO:0008270;gene=yrdD;Parent=GCA000010485_03315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_001296461.1,SO:0001217,UniParc:UPI0001C22CE6,UniRef:UniRef100_A0A0C5EQ11,UniRef:UniRef50_P45771,UniRef:UniRef90_P45771
contig_1	Pyrodigal	gene	3390721	3391194	.	-	.	ID=GCA000010485_03316_gene;locus_tag=GCA000010485_03316;gene=smg
contig_1	Pyrodigal	CDS	3390721	3391194	.	-	0	ID=GCA000010485_03316;Name=DUF494 domain-containing protein;locus_tag=GCA000010485_03316;product=DUF494 domain-containing protein;gene=smg;Parent=GCA000010485_03316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2922,COG:S,KEGG:K03747,RefSeq:WP_000460673.1,SO:0001217,UniParc:UPI0001C22CE7,UniRef:UniRef100_A0A061Y7Q1,UniRef:UniRef50_P0A828,UniRef:UniRef90_P0A828
contig_1	Pyrodigal	gene	3391166	3392290	.	-	.	ID=GCA000010485_03317_gene;locus_tag=GCA000010485_03317;gene=dprA
contig_1	Pyrodigal	CDS	3391166	3392290	.	-	0	ID=GCA000010485_03317;Name=DNA-protecting protein DprA;locus_tag=GCA000010485_03317;product=DNA-protecting protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000010485_03317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_000228517.1,SO:0001217,UniParc:UPI00005EFD63,UniRef:UniRef100_E2QFE2,UniRef:UniRef50_P30852,UniRef:UniRef90_P30852
contig_1	Pyrodigal	gene	3392420	3392929	.	+	.	ID=GCA000010485_03318_gene;locus_tag=GCA000010485_03318;gene=def
contig_1	Pyrodigal	CDS	3392420	3392929	.	+	0	ID=GCA000010485_03318;Name=peptide deformylase;locus_tag=GCA000010485_03318;product=peptide deformylase;Dbxref=GO:0006412,GO:0036211,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000010485_03318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000114984.1,SO:0001217,UniParc:UPI000014A58D,UniRef:UniRef100_P0A6K3,UniRef:UniRef50_P0A6K3,UniRef:UniRef90_P0A6K3;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	3392944	3393891	.	+	.	ID=GCA000010485_03319_gene;locus_tag=GCA000010485_03319;gene=fmt
contig_1	Pyrodigal	CDS	3392944	3393891	.	+	0	ID=GCA000010485_03319;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000010485_03319;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000010485_03319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,RefSeq:WP_000004421.1,SO:0001217,UniParc:UPI0000D50CDB,UniRef:UniRef100_B7MCQ3,UniRef:UniRef50_P23882,UniRef:UniRef90_P23882;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	3393943	3395232	.	+	.	ID=GCA000010485_03320_gene;locus_tag=GCA000010485_03320;gene=rsmB
contig_1	Pyrodigal	CDS	3393943	3395232	.	+	0	ID=GCA000010485_03320;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA000010485_03320;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0001510,GO:0003723,GO:0005829,GO:0006355,GO:0006364,GO:0008649,GO:0009383,GO:0070475;gene=rsmB;Parent=GCA000010485_03320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03500,RefSeq:WP_000744765.1,SO:0001217,UniParc:UPI0001C22CE8,UniRef:UniRef100_A0A066SYQ7,UniRef:UniRef50_P36929,UniRef:UniRef90_P36929;ec_number=2.1.1.176
contig_1	Pyrodigal	gene	3395254	3396630	.	+	.	ID=GCA000010485_03321_gene;locus_tag=GCA000010485_03321;gene=trkA
contig_1	Pyrodigal	CDS	3395254	3396630	.	+	0	ID=GCA000010485_03321;Name=Trk system potassium transporter TrkA;locus_tag=GCA000010485_03321;product=Trk system potassium transporter TrkA;Dbxref=GO:0005886,GO:0006813,GO:0015079,GO:0016020;gene=trkA;Parent=GCA000010485_03321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000691382.1,SO:0001217,UniParc:UPI00001373C5,UniRef:UniRef100_P0AGI8,UniRef:UniRef50_P0AGI8,UniRef:UniRef90_P0AGI8
contig_1	Pyrodigal	gene	3396760	3397173	.	+	.	ID=GCA000010485_03322_gene;locus_tag=GCA000010485_03322;gene=mscL
contig_1	Pyrodigal	CDS	3396760	3397173	.	+	0	ID=GCA000010485_03322;Name=large-conductance mechanosensitive channel protein MscL;locus_tag=GCA000010485_03322;product=large-conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0008381;gene=mscL;Parent=GCA000010485_03322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,KEGG:K03282,RefSeq:WP_000022450.1,SO:0001217,UniParc:UPI00000DF127,UniRef:UniRef100_B7MCQ6,UniRef:UniRef50_P0A742,UniRef:UniRef90_P0A742
contig_1	Pyrodigal	gene	3397170	3397388	.	-	.	ID=GCA000010485_03323_gene;locus_tag=GCA000010485_03323;gene=arfA
contig_1	Pyrodigal	CDS	3397170	3397388	.	-	0	ID=GCA000010485_03323;Name=alternative ribosome-rescue factor ArfA;locus_tag=GCA000010485_03323;product=alternative ribosome-rescue factor ArfA;gene=arfA;Parent=GCA000010485_03323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000092696,KEGG:K09890,RefSeq:WP_000092695.1,SO:0001217,UniParc:UPI00000DF128,UniRef:UniRef100_E2QFE8,UniRef:UniRef50_B7LRQ8,UniRef:UniRef90_B7LRQ8
contig_1	Pyrodigal	gene	3397444	3397869	.	-	.	ID=GCA000010485_03324_gene;locus_tag=GCA000010485_03324;gene=zntR
contig_1	Pyrodigal	CDS	3397444	3397869	.	-	0	ID=GCA000010485_03324;Name=Zn(2+)-responsive transcriptional regulator;locus_tag=GCA000010485_03324;product=Zn(2+)-responsive transcriptional regulator;Dbxref=GO:0003677,GO:0006355,GO:0008270;gene=zntR;Parent=GCA000010485_03324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13638,RefSeq:WP_000285610.1,SO:0001217,UniParc:UPI00000DF129,UniRef:UniRef100_E2QFE9,UniRef:UniRef50_P0ACS5,UniRef:UniRef90_D2TN95
contig_1	Pyrodigal	gene	3397880	3398248	.	-	.	ID=GCA000010485_03325_gene;locus_tag=GCA000010485_03325
contig_1	Pyrodigal	CDS	3397880	3398248	.	-	0	ID=GCA000010485_03325;Name=DnaJ-like ue subfamily C member 28 conserved domain-containing protein;locus_tag=GCA000010485_03325;product=DnaJ-like ue subfamily C member 28 conserved domain-containing protein;Parent=GCA000010485_03325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000266504.1,SO:0001217,UniParc:UPI00000DF12A,UniRef:UniRef100_E2QFF0,UniRef:UniRef50_P36677,UniRef:UniRef90_Q32B58
contig_1	Pyrodigal	gene	3398355	3398738	.	-	.	ID=GCA000010485_03326_gene;locus_tag=GCA000010485_03326;gene=rpsD
contig_1	Pyrodigal	CDS	3398355	3398738	.	-	0	ID=GCA000010485_03326;Name=30S ribosomal protein S4;locus_tag=GCA000010485_03326;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0022625;gene=rpsD;Parent=GCA000010485_03326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,KEGG:K02879,RefSeq:WP_001216368.1,SO:0001217,UniParc:UPI000003EB6B,UniRef:UniRef100_P0AG44,UniRef:UniRef50_P0AG44,UniRef:UniRef90_P0AG44
contig_1	Pyrodigal	gene	3398779	3399768	.	-	.	ID=GCA000010485_03327_gene;locus_tag=GCA000010485_03327;gene=rpoA
contig_1	Pyrodigal	CDS	3398779	3399768	.	-	0	ID=GCA000010485_03327;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000010485_03327;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA000010485_03327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_001162094.1,SO:0001217,UniParc:UPI000003EB6C,UniRef:UniRef100_A8AQJ0,UniRef:UniRef50_P0A0Y1,UniRef:UniRef90_A8AQJ0;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	3399794	3400414	.	-	.	ID=GCA000010485_03328_gene;locus_tag=GCA000010485_03328;gene=rpsD
contig_1	Pyrodigal	CDS	3399794	3400414	.	-	0	ID=GCA000010485_03328;Name=30S ribosomal protein S4;locus_tag=GCA000010485_03328;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000010485_03328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_000135224.1,SO:0001217,UniParc:UPI000003EB6D,UniRef:UniRef100_A8AQJ1,UniRef:UniRef50_O54297,UniRef:UniRef90_O54297
contig_1	Pyrodigal	gene	3400448	3400837	.	-	.	ID=GCA000010485_03329_gene;locus_tag=GCA000010485_03329;gene=rpsK
contig_1	Pyrodigal	CDS	3400448	3400837	.	-	0	ID=GCA000010485_03329;Name=30S ribosomal protein S11;locus_tag=GCA000010485_03329;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000010485_03329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_001029685.1,SO:0001217,UniParc:UPI0001C22CE9,UniRef:UniRef100_A0A061YF40,UniRef:UniRef50_P0A7R9,UniRef:UniRef90_P0A7R9
contig_1	Pyrodigal	gene	3400854	3401210	.	-	.	ID=GCA000010485_03330_gene;locus_tag=GCA000010485_03330;gene=rpsM
contig_1	Pyrodigal	CDS	3400854	3401210	.	-	0	ID=GCA000010485_03330;Name=30S ribosomal protein S13;locus_tag=GCA000010485_03330;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000010485_03330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,RefSeq:WP_000090775.1,SO:0001217,UniParc:UPI000003EB6F,UniRef:UniRef100_P0A7S9,UniRef:UniRef50_P0A7S9,UniRef:UniRef90_P0A7S9
contig_1	Infernal	regulatory_region	3401178	3401289	3.2e-15	-	.	ID=EFPPCJGBKI_303;Name=Alpha operon ribosome binding site;product=Alpha operon ribosome binding site;Dbxref=RFAM:RF00140;inference=profile:Rfam:RF00140;Note=SO:0000139;regulatory_class=ribosome_binding_site
contig_1	Pyrodigal	gene	3401357	3401473	.	-	.	ID=GCA000010485_03331_gene;locus_tag=GCA000010485_03331;gene=rpmJ
contig_1	Pyrodigal	CDS	3401357	3401473	.	-	0	ID=GCA000010485_03331;Name=50S ribosomal protein L36;locus_tag=GCA000010485_03331;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA000010485_03331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_000868187.1,SO:0001217,UniParc:UPI000003EAC1,UniRef:UniRef100_P0A7Q8,UniRef:UniRef50_P0A7Q8,UniRef:UniRef90_P0A7Q8
contig_1	Pyrodigal	gene	3401505	3402836	.	-	.	ID=GCA000010485_03332_gene;locus_tag=GCA000010485_03332;gene=secY
contig_1	Pyrodigal	CDS	3401505	3402836	.	-	0	ID=GCA000010485_03332;Name=preprotein translocase subunit SecY;locus_tag=GCA000010485_03332;product=preprotein translocase subunit SecY;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0016020,GO:0043952,GO:0065002;gene=secY;Parent=GCA000010485_03332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_001118861.1,SO:0001217,UniParc:UPI000003EAC2,UniRef:UniRef100_P0AGA2,UniRef:UniRef50_P0AGA2,UniRef:UniRef90_P0AGA2
contig_1	Pyrodigal	gene	3402844	3403278	.	-	.	ID=GCA000010485_03333_gene;locus_tag=GCA000010485_03333;gene=rplO
contig_1	Pyrodigal	CDS	3402844	3403278	.	-	0	ID=GCA000010485_03333;Name=50S ribosomal protein L15;locus_tag=GCA000010485_03333;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000010485_03333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,RefSeq:WP_001238917.1,SO:0001217,UniParc:UPI000005A7FC,UniRef:UniRef100_A8AQJ5,UniRef:UniRef50_P02413,UniRef:UniRef90_P02413
contig_1	Pyrodigal	gene	3403282	3403461	.	-	.	ID=GCA000010485_03334_gene;locus_tag=GCA000010485_03334;gene=rpmD
contig_1	Pyrodigal	CDS	3403282	3403461	.	-	0	ID=GCA000010485_03334;Name=50S ribosomal protein L30;locus_tag=GCA000010485_03334;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000010485_03334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1841,COG:J,RefSeq:WP_001140433.1,SO:0001217,UniParc:UPI000003EAC4,UniRef:UniRef100_P0AG51,UniRef:UniRef50_P0AG51,UniRef:UniRef90_P0AG51
contig_1	Pyrodigal	gene	3403465	3403968	.	-	.	ID=GCA000010485_03335_gene;locus_tag=GCA000010485_03335;gene=rpsE
contig_1	Pyrodigal	CDS	3403465	3403968	.	-	0	ID=GCA000010485_03335;Name=30S ribosomal protein S5;locus_tag=GCA000010485_03335;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000010485_03335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_000940121.1,SO:0001217,UniParc:UPI000003EAC5,UniRef:UniRef100_A8AQJ8,UniRef:UniRef50_Q9HWF2,UniRef:UniRef90_Q9CL47
contig_1	Pyrodigal	gene	3403983	3404336	.	-	.	ID=GCA000010485_03336_gene;locus_tag=GCA000010485_03336;gene=rplR
contig_1	Pyrodigal	CDS	3403983	3404336	.	-	0	ID=GCA000010485_03336;Name=50S ribosomal protein L18;locus_tag=GCA000010485_03336;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000010485_03336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_000358960.1,SO:0001217,UniParc:UPI000003EAC6,UniRef:UniRef100_A8AQJ9,UniRef:UniRef50_P44356,UniRef:UniRef90_Q7CPL6
contig_1	Pyrodigal	gene	3404346	3404879	.	-	.	ID=GCA000010485_03337_gene;locus_tag=GCA000010485_03337;gene=rplF
contig_1	Pyrodigal	CDS	3404346	3404879	.	-	0	ID=GCA000010485_03337;Name=50S ribosomal protein L6;locus_tag=GCA000010485_03337;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000010485_03337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_000091945.1,SO:0001217,UniParc:UPI000003EAC7,UniRef:UniRef100_P0AG55,UniRef:UniRef50_P0AG55,UniRef:UniRef90_P0AG55
contig_1	Pyrodigal	gene	3404892	3405284	.	-	.	ID=GCA000010485_03338_gene;locus_tag=GCA000010485_03338
contig_1	Pyrodigal	CDS	3404892	3405284	.	-	0	ID=GCA000010485_03338;Name=Small ribosomal subunit protein uS8;locus_tag=GCA000010485_03338;product=Small ribosomal subunit protein uS8;Parent=GCA000010485_03338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062611.1,SO:0001217,UniParc:UPI000003EAC8,UniRef:UniRef100_A8AQK2,UniRef:UniRef90_Q6CZY4
contig_1	Pyrodigal	gene	3405318	3405623	.	-	.	ID=GCA000010485_03339_gene;locus_tag=GCA000010485_03339;gene=rpsN
contig_1	Pyrodigal	CDS	3405318	3405623	.	-	0	ID=GCA000010485_03339;Name=30S ribosomal protein S14;locus_tag=GCA000010485_03339;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000010485_03339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_001118930.1,SO:0001217,UniParc:UPI000003EAC9,UniRef:UniRef100_P0AG59,UniRef:UniRef50_P0AG59,UniRef:UniRef90_P0AG59
contig_1	Pyrodigal	gene	3405638	3406177	.	-	.	ID=GCA000010485_03340_gene;locus_tag=GCA000010485_03340;gene=rplE
contig_1	Pyrodigal	CDS	3405638	3406177	.	-	0	ID=GCA000010485_03340;Name=50S ribosomal protein L5;locus_tag=GCA000010485_03340;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000010485_03340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_001096200.1,SO:0001217,UniParc:UPI000003EACA,UniRef:UniRef100_P62399,UniRef:UniRef50_P62399,UniRef:UniRef90_P62399
contig_1	Pyrodigal	gene	3406192	3406506	.	-	.	ID=GCA000010485_03341_gene;locus_tag=GCA000010485_03341;gene=rplX
contig_1	Pyrodigal	CDS	3406192	3406506	.	-	0	ID=GCA000010485_03341;Name=50S ribosomal protein L24;locus_tag=GCA000010485_03341;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplX;Parent=GCA000010485_03341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_000729186.1,SO:0001217,UniParc:UPI00000DF12F,UniRef:UniRef100_B7UK33,UniRef:UniRef50_P60624,UniRef:UniRef90_P60624
contig_1	Pyrodigal	gene	3406517	3406888	.	-	.	ID=GCA000010485_03342_gene;locus_tag=GCA000010485_03342;gene=rplN
contig_1	Pyrodigal	CDS	3406517	3406888	.	-	0	ID=GCA000010485_03342;Name=50S ribosomal protein L14;locus_tag=GCA000010485_03342;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000010485_03342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,KEGG:K02874,RefSeq:WP_000613955.1,SO:0001217,UniParc:UPI000003EACC,UniRef:UniRef100_P0ADY3,UniRef:UniRef50_P0ADY3,UniRef:UniRef90_P0ADY3
contig_1	Pyrodigal	gene	3407053	3407307	.	-	.	ID=GCA000010485_03343_gene;locus_tag=GCA000010485_03343;gene=rpsQ
contig_1	Pyrodigal	CDS	3407053	3407307	.	-	0	ID=GCA000010485_03343;Name=30S ribosomal protein S17;locus_tag=GCA000010485_03343;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000010485_03343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_000130100.1,SO:0001217,UniParc:UPI000003EADE,UniRef:UniRef100_P0AG63,UniRef:UniRef50_P0AG63,UniRef:UniRef90_P0AG63
contig_1	Pyrodigal	gene	3407307	3407498	.	-	.	ID=GCA000010485_03344_gene;locus_tag=GCA000010485_03344;gene=rpmC
contig_1	Pyrodigal	CDS	3407307	3407498	.	-	0	ID=GCA000010485_03344;Name=50S ribosomal protein L29;locus_tag=GCA000010485_03344;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000010485_03344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000644741.1,SO:0001217,UniParc:UPI000003EADF,UniRef:UniRef100_P0A7M6,UniRef:UniRef50_P0A7M6,UniRef:UniRef90_P0A7M6
contig_1	Pyrodigal	gene	3407498	3407908	.	-	.	ID=GCA000010485_03345_gene;locus_tag=GCA000010485_03345;gene=rplP
contig_1	Pyrodigal	CDS	3407498	3407908	.	-	0	ID=GCA000010485_03345;Name=50S ribosomal protein L16;locus_tag=GCA000010485_03345;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000010485_03345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,RefSeq:WP_000941212.1,SO:0001217,UniParc:UPI000003EAE0,UniRef:UniRef100_A8AQK9,UniRef:UniRef50_Q83ER9,UniRef:UniRef90_Q9CL38
contig_1	Pyrodigal	gene	3407921	3408622	.	-	.	ID=GCA000010485_03346_gene;locus_tag=GCA000010485_03346;gene=rpsC
contig_1	Pyrodigal	CDS	3407921	3408622	.	-	0	ID=GCA000010485_03346;Name=30S ribosomal protein S3;locus_tag=GCA000010485_03346;product=30S ribosomal protein S3;Dbxref=GO:0000028,GO:0002181,GO:0003729,GO:0003735,GO:0005737,GO:0005829,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000010485_03346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_000529945.1,SO:0001217,UniParc:UPI000003EAE1,UniRef:UniRef100_A8AQL0,UniRef:UniRef50_A8AQL0,UniRef:UniRef90_A8AQL0
contig_1	Pyrodigal	gene	3408640	3408972	.	-	.	ID=GCA000010485_03347_gene;locus_tag=GCA000010485_03347;gene=rplV
contig_1	Pyrodigal	CDS	3408640	3408972	.	-	0	ID=GCA000010485_03347;Name=50S ribosomal protein L22;locus_tag=GCA000010485_03347;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000010485_03347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_000447529.1,SO:0001217,UniParc:UPI000003EAE2,UniRef:UniRef100_A8AQL2,UniRef:UniRef50_P44360,UniRef:UniRef90_P44360
contig_1	Pyrodigal	gene	3408987	3409265	.	-	.	ID=GCA000010485_03348_gene;locus_tag=GCA000010485_03348;gene=rpsS
contig_1	Pyrodigal	CDS	3408987	3409265	.	-	0	ID=GCA000010485_03348;Name=30S ribosomal protein S19;locus_tag=GCA000010485_03348;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000010485_03348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_001138117.1,SO:0001217,UniParc:UPI000003EAE3,UniRef:UniRef100_A8AQL3,UniRef:UniRef50_P21476,UniRef:UniRef90_P66491
contig_1	Pyrodigal	gene	3409282	3410103	.	-	.	ID=GCA000010485_03349_gene;locus_tag=GCA000010485_03349;gene=rplB
contig_1	Pyrodigal	CDS	3409282	3410103	.	-	0	ID=GCA000010485_03349;Name=50S ribosomal protein L2;locus_tag=GCA000010485_03349;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000010485_03349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,KEGG:K02886,RefSeq:WP_000301864.1,SO:0001217,UniParc:UPI000003EAE4,UniRef:UniRef100_P60422,UniRef:UniRef50_P60422,UniRef:UniRef90_P60422
contig_1	Pyrodigal	gene	3410121	3410423	.	-	.	ID=GCA000010485_03350_gene;locus_tag=GCA000010485_03350;gene=rplW
contig_1	Pyrodigal	CDS	3410121	3410423	.	-	0	ID=GCA000010485_03350;Name=50S ribosomal protein L23;locus_tag=GCA000010485_03350;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA000010485_03350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_000617544.1,SO:0001217,UniParc:UPI000003EAE5,UniRef:UniRef100_P0ADZ0,UniRef:UniRef50_P0ADZ0,UniRef:UniRef90_P0ADZ0
contig_1	Pyrodigal	gene	3410420	3411025	.	-	.	ID=GCA000010485_03351_gene;locus_tag=GCA000010485_03351;gene=rplD
contig_1	Pyrodigal	CDS	3410420	3411025	.	-	0	ID=GCA000010485_03351;Name=50S ribosomal protein L4;locus_tag=GCA000010485_03351;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000010485_03351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_000424395.1,SO:0001217,UniParc:UPI000003EAE6,UniRef:UniRef100_A8AQL8,UniRef:UniRef50_P44345,UniRef:UniRef90_P49226
contig_1	Pyrodigal	gene	3411036	3411665	.	-	.	ID=GCA000010485_03352_gene;locus_tag=GCA000010485_03352;gene=rplC
contig_1	Pyrodigal	CDS	3411036	3411665	.	-	0	ID=GCA000010485_03352;Name=50S ribosomal protein L3;locus_tag=GCA000010485_03352;product=50S ribosomal protein L3;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000010485_03352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,RefSeq:WP_000579833.1,SO:0001217,UniParc:UPI000003EAE7,UniRef:UniRef100_P60438,UniRef:UniRef50_P60438,UniRef:UniRef90_P60438
contig_1	Pyrodigal	gene	3411698	3412009	.	-	.	ID=GCA000010485_03353_gene;locus_tag=GCA000010485_03353;gene=rpsJ
contig_1	Pyrodigal	CDS	3411698	3412009	.	-	0	ID=GCA000010485_03353;Name=30S ribosomal protein S10;locus_tag=GCA000010485_03353;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ;Parent=GCA000010485_03353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001181004.1,SO:0001217,UniParc:UPI000003EAE8,UniRef:UniRef100_P0A7R5,UniRef:UniRef50_P0A7R5,UniRef:UniRef90_P0A7R5
contig_1	Pyrodigal	gene	3412247	3412666	.	-	.	ID=GCA000010485_03354_gene;locus_tag=GCA000010485_03354;gene=gspB
contig_1	Pyrodigal	CDS	3412247	3412666	.	-	0	ID=GCA000010485_03354;Name=putative general secretion pathway protein GspB;locus_tag=GCA000010485_03354;product=putative general secretion pathway protein GspB;Dbxref=GO:0005886;gene=gspB;Parent=GCA000010485_03354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000461439.1,SO:0001217,UniParc:UPI0001C22CEA,UniRef:UniRef100_A0A066SR22,UniRef:UniRef50_P03825,UniRef:UniRef90_P03825
contig_1	Pyrodigal	gene	3412668	3414137	.	-	.	ID=GCA000010485_03355_gene;locus_tag=GCA000010485_03355;gene=gspA
contig_1	Pyrodigal	CDS	3412668	3414137	.	-	0	ID=GCA000010485_03355;Name=type II secretion system protein GspA;locus_tag=GCA000010485_03355;product=type II secretion system protein GspA;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0016887;gene=gspA;Parent=GCA000010485_03355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000107576,RefSeq:WP_000107579.1,SO:0001217,UniParc:UPI0001C22CEB,UniRef:UniRef100_A0A061YBJ2,UniRef:UniRef50_P45756,UniRef:UniRef90_P45756
contig_1	Pyrodigal	gene	3414317	3415132	.	+	.	ID=GCA000010485_03356_gene;locus_tag=GCA000010485_03356;gene=gspC
contig_1	Pyrodigal	CDS	3414317	3415132	.	+	0	ID=GCA000010485_03356;Name=type II secretion system protein GspC;locus_tag=GCA000010485_03356;product=type II secretion system protein GspC;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspC;Parent=GCA000010485_03356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001142680.1,SO:0001217,UniParc:UPI0001C22CEC,UniRef:UniRef100_A0A066SYL7,UniRef:UniRef50_P45757,UniRef:UniRef90_P45757
contig_1	Pyrodigal	gene	3415116	3417068	.	+	.	ID=GCA000010485_03357_gene;locus_tag=GCA000010485_03357;gene=gspD
contig_1	Pyrodigal	CDS	3415116	3417068	.	+	0	ID=GCA000010485_03357;Name=type II secretion system secretin GspD;locus_tag=GCA000010485_03357;product=type II secretion system secretin GspD;Dbxref=GO:0009279,GO:0009306,GO:0015627,GO:0015628,GO:0019867,GO:0042802;gene=gspD;Parent=GCA000010485_03357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001525807.1,SO:0001217,UniParc:UPI00018877AD,UniRef:UniRef100_A0A135XAV4,UniRef:UniRef50_P45758,UniRef:UniRef90_P45758
contig_1	Pyrodigal	gene	3417078	3418559	.	+	.	ID=GCA000010485_03358_gene;locus_tag=GCA000010485_03358;gene=gspE
contig_1	Pyrodigal	CDS	3417078	3418559	.	+	0	ID=GCA000010485_03358;Name=type II secretion system ATPase GspE;locus_tag=GCA000010485_03358;product=type II secretion system ATPase GspE;Dbxref=GO:0005524,GO:0005886,GO:0008564,GO:0015627,GO:0015628,GO:0016887,GO:0046872;gene=gspE;Parent=GCA000010485_03358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001219886.1,SO:0001217,UniParc:UPI0001C22CED,UniRef:UniRef100_A0A066SQR7,UniRef:UniRef50_P37093,UniRef:UniRef90_P45759;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	3418556	3419752	.	+	.	ID=GCA000010485_03359_gene;locus_tag=GCA000010485_03359;gene=gspF
contig_1	Pyrodigal	CDS	3418556	3419752	.	+	0	ID=GCA000010485_03359;Name=type II secretion system inner membrane protein GspF;locus_tag=GCA000010485_03359;product=type II secretion system inner membrane protein GspF;Dbxref=GO:0005886,GO:0015627,GO:0015628,GO:0046872;gene=gspF;Parent=GCA000010485_03359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001109564.1,SO:0001217,UniParc:UPI0001C22CEE,UniRef:UniRef100_A0A061KQQ1,UniRef:UniRef50_P41441,UniRef:UniRef90_P41441
contig_1	Pyrodigal	gene	3419762	3420199	.	+	.	ID=GCA000010485_03360_gene;locus_tag=GCA000010485_03360;gene=gspG
contig_1	Pyrodigal	CDS	3419762	3420199	.	+	0	ID=GCA000010485_03360;Name=type II secretion system major pseudopilin GspG;locus_tag=GCA000010485_03360;product=type II secretion system major pseudopilin GspG;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspG;Parent=GCA000010485_03360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001202877.1,SO:0001217,UniParc:UPI00000E4A7F,UniRef:UniRef100_A0A061LHA6,UniRef:UniRef50_Q00514,UniRef:UniRef90_P41442
contig_1	Pyrodigal	gene	3420207	3420716	.	+	.	ID=GCA000010485_03361_gene;locus_tag=GCA000010485_03361;gene=gspH
contig_1	Pyrodigal	CDS	3420207	3420716	.	+	0	ID=GCA000010485_03361;Name=type II secretion system minor pseudopilin GspH;locus_tag=GCA000010485_03361;product=type II secretion system minor pseudopilin GspH;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspH;Parent=GCA000010485_03361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02457,RefSeq:WP_001076039.1,SO:0001217,UniParc:UPI0001C22D1D,UniRef:UniRef100_A0A061Y7K8,UniRef:UniRef50_P41443,UniRef:UniRef90_P41443
contig_1	Pyrodigal	gene	3420713	3421090	.	+	.	ID=GCA000010485_03362_gene;locus_tag=GCA000010485_03362;gene=gspI
contig_1	Pyrodigal	CDS	3420713	3421090	.	+	0	ID=GCA000010485_03362;Name=type II secretion system minor pseudopilin GspI;locus_tag=GCA000010485_03362;product=type II secretion system minor pseudopilin GspI;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspI;Parent=GCA000010485_03362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001041749.1,SO:0001217,UniParc:UPI0001C22D1E,UniRef:UniRef100_A0A061YFP1,UniRef:UniRef50_P45760,UniRef:UniRef90_P45760
contig_1	Pyrodigal	gene	3421083	3421670	.	+	.	ID=GCA000010485_03363_gene;locus_tag=GCA000010485_03363;gene=gspJ
contig_1	Pyrodigal	CDS	3421083	3421670	.	+	0	ID=GCA000010485_03363;Name=type II secretion system minor pseudopilin GspJ;locus_tag=GCA000010485_03363;product=type II secretion system minor pseudopilin GspJ;Dbxref=GO:0005886,GO:0015627,GO:0015628;gene=gspJ;Parent=GCA000010485_03363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000610634,RefSeq:WP_000610632.1,SO:0001217,UniParc:UPI00005EF723,UniRef:UniRef100_E2QFI8,UniRef:UniRef50_P45761,UniRef:UniRef90_P45761
contig_1	Pyrodigal	gene	3421663	3422646	.	+	.	ID=GCA000010485_03364_gene;locus_tag=GCA000010485_03364;gene=gspK
contig_1	Pyrodigal	CDS	3421663	3422646	.	+	0	ID=GCA000010485_03364;Name=type II secretion system minor pseudopilin GspK;locus_tag=GCA000010485_03364;product=type II secretion system minor pseudopilin GspK;Dbxref=GO:0005886,GO:0009306,GO:0016020;gene=gspK;Parent=GCA000010485_03364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001058510.1,SO:0001217,UniParc:UPI0001C22D1F,UniRef:UniRef100_UPI0001C22D1F,UniRef:UniRef50_P36678,UniRef:UniRef90_P45762
contig_1	Pyrodigal	gene	3422661	3423824	.	+	.	ID=GCA000010485_03365_gene;locus_tag=GCA000010485_03365;gene=gspL
contig_1	Pyrodigal	CDS	3422661	3423824	.	+	0	ID=GCA000010485_03365;Name=type II secretion system protein GspL;locus_tag=GCA000010485_03365;product=type II secretion system protein GspL;Dbxref=GO:0005886,GO:0009276,GO:0015627,GO:0015628;gene=gspL;Parent=GCA000010485_03365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02461,RefSeq:WP_001296464.1,SO:0001217,UniParc:UPI0001E8B278,UniRef:UniRef100_A0A061KR75,UniRef:UniRef50_P45763,UniRef:UniRef90_P45763
contig_1	Pyrodigal	gene	3423821	3424282	.	+	.	ID=GCA000010485_03366_gene;locus_tag=GCA000010485_03366;gene=gspM
contig_1	Pyrodigal	CDS	3423821	3424282	.	+	0	ID=GCA000010485_03366;Name=type II secretion system protein GspM;locus_tag=GCA000010485_03366;product=type II secretion system protein GspM;gene=gspM;Parent=GCA000010485_03366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295161,RefSeq:WP_001296465.1,SO:0001217,UniParc:UPI0002A3AD36,UniRef:UniRef100_A0A066SYK6,UniRef:UniRef50_A0A2X6DHC2,UniRef:UniRef90_A0A066SYK6
contig_1	Pyrodigal	gene	3424282	3424959	.	+	.	ID=GCA000010485_03367_gene;locus_tag=GCA000010485_03367;gene=gspO
contig_1	Pyrodigal	CDS	3424282	3424959	.	+	0	ID=GCA000010485_03367;Name=prepilin peptidase GspO;locus_tag=GCA000010485_03367;product=prepilin peptidase GspO;Dbxref=GO:0004190,GO:0005886,GO:0006465,GO:0008233,GO:0016740;gene=gspO;Parent=GCA000010485_03367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000178154,RefSeq:WP_000178170.1,SO:0001217,UniParc:UPI0001C22D22,UniRef:UniRef100_A0A0V9RZF7,UniRef:UniRef50_P25960,UniRef:UniRef90_P25960;ec_number=3.4.23.43
contig_1	Pyrodigal	gene	3424988	3425464	.	-	.	ID=GCA000010485_03368_gene;locus_tag=GCA000010485_03368;gene=bfr
contig_1	Pyrodigal	CDS	3424988	3425464	.	-	0	ID=GCA000010485_03368;Name=bacterioferritin;locus_tag=GCA000010485_03368;product=bacterioferritin;Dbxref=GO:0004322,GO:0005506,GO:0005829,GO:0006879,GO:0006880,GO:0008199,GO:0015093,GO:0016020,GO:0016491,GO:0020037,GO:0042802,GO:0042803,GO:0140315;gene=bfr;Parent=GCA000010485_03368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2193,COG:P,RefSeq:WP_000675504.1,SO:0001217,UniParc:UPI0000110851,UniRef:UniRef100_P0ABD3,UniRef:UniRef50_P0ABD3,UniRef:UniRef90_P0ABD3;ec_number=1.16.3.1
contig_1	Pyrodigal	gene	3425536	3425730	.	-	.	ID=GCA000010485_03369_gene;locus_tag=GCA000010485_03369;gene=bfd
contig_1	Pyrodigal	CDS	3425536	3425730	.	-	0	ID=GCA000010485_03369;Name=bacterioferritin-associated ferredoxin;locus_tag=GCA000010485_03369;product=bacterioferritin-associated ferredoxin;Dbxref=GO:0046872,GO:0051537;gene=bfd;Parent=GCA000010485_03369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000289085.1,SO:0001217,UniParc:UPI00001268AC,UniRef:UniRef100_P0AE56,UniRef:UniRef50_P0AE56,UniRef:UniRef90_P0AE56
contig_1	Pyrodigal	gene	3425899	3428601	.	-	.	ID=GCA000010485_03370_gene;locus_tag=GCA000010485_03370;gene=chiA
contig_1	Pyrodigal	CDS	3425899	3428601	.	-	0	ID=GCA000010485_03370;Name=bifunctional chitinase/lysozyme;locus_tag=GCA000010485_03370;product=bifunctional chitinase/lysozyme;gene=chiA;Parent=GCA000010485_03370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000773156,RefSeq:WP_000773180.1,SO:0001217,UniParc:UPI0001C22D23,UniRef:UniRef100_A0A066SUM4,UniRef:UniRef50_P13656,UniRef:UniRef90_A0A234S2A5;ec_number=3.2.1.17
contig_1	Pyrodigal	gene	3428893	3430077	.	-	.	ID=GCA000010485_03371_gene;locus_tag=GCA000010485_03371;gene=tufA_E379K
contig_1	Pyrodigal	CDS	3428893	3430077	.	-	0	ID=GCA000010485_03371;Name=translation elongation factor EF-Tu 1;locus_tag=GCA000010485_03371;product=translation elongation factor EF-Tu 1;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414,GO:0097216;gene=tufA_E379K;Parent=GCA000010485_03371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_000031783.1,SO:0001217,UniParc:UPI000000E853,UniRef:UniRef100_P0CE47,UniRef:UniRef50_P0CE47,UniRef:UniRef90_P0CE47
contig_1	Pyrodigal	gene	3430148	3432262	.	-	.	ID=GCA000010485_03372_gene;locus_tag=GCA000010485_03372;gene=fusA
contig_1	Pyrodigal	CDS	3430148	3432262	.	-	0	ID=GCA000010485_03372;Name=elongation factor G;locus_tag=GCA000010485_03372;product=elongation factor G;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790,GO:0097216;gene=fusA;Parent=GCA000010485_03372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,RefSeq:WP_000124700.1,SO:0001217,UniParc:UPI0000047C59,UniRef:UniRef100_P0A6M8,UniRef:UniRef50_P0A6M8,UniRef:UniRef90_P0A6M8;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	3432359	3432829	.	-	.	ID=GCA000010485_03373_gene;locus_tag=GCA000010485_03373;gene=rpsG
contig_1	Pyrodigal	CDS	3432359	3432829	.	-	0	ID=GCA000010485_03373;Name=30S ribosomal protein S7;locus_tag=GCA000010485_03373;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000010485_03373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_001138043.1,SO:0001217,UniParc:UPI0000163A1D,UniRef:UniRef100_P02359,UniRef:UniRef50_P02359,UniRef:UniRef90_P02359
contig_1	Pyrodigal	gene	3432926	3433300	.	-	.	ID=GCA000010485_03374_gene;locus_tag=GCA000010485_03374;gene=rpsL
contig_1	Pyrodigal	CDS	3432926	3433300	.	-	0	ID=GCA000010485_03374;Name=30S ribosomal protein S12 RpsL;locus_tag=GCA000010485_03374;product=30S ribosomal protein S12 RpsL;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsL;Parent=GCA000010485_03374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,KEGG:K02950,RefSeq:WP_000246815.1,SO:0001217,UniParc:UPI0000047C5B,UniRef:UniRef100_P0A7S3,UniRef:UniRef50_P0A7S3,UniRef:UniRef90_P0A7S3
contig_1	Pyrodigal	gene	3433426	3433713	.	-	.	ID=GCA000010485_03375_gene;locus_tag=GCA000010485_03375;gene=tusB
contig_1	Pyrodigal	CDS	3433426	3433713	.	-	0	ID=GCA000010485_03375;Name=sulfurtransferase complex subunit TusB;locus_tag=GCA000010485_03375;product=sulfurtransferase complex subunit TusB;Dbxref=GO:0002143,GO:1990228;gene=tusB;Parent=GCA000010485_03375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2168,COG:J,KEGG:K07237,RefSeq:WP_000903381.1,SO:0001217,UniParc:UPI00000DF143,UniRef:UniRef100_B7MCV8,UniRef:UniRef50_P45530,UniRef:UniRef90_P45530;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	3433720	3434079	.	-	.	ID=GCA000010485_03376_gene;locus_tag=GCA000010485_03376;gene=tusC
contig_1	Pyrodigal	CDS	3433720	3434079	.	-	0	ID=GCA000010485_03376;Name=sulfurtransferase complex subunit TusC;locus_tag=GCA000010485_03376;product=sulfurtransferase complex subunit TusC;Dbxref=GO:0005737,GO:0008033;gene=tusC;Parent=GCA000010485_03376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2923,COG:J,KEGG:K07236,RefSeq:WP_000820731.1,SO:0001217,UniParc:UPI00018877C3,UniRef:UniRef100_B7N1C5,UniRef:UniRef50_Q8X884,UniRef:UniRef90_Q8X884;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	3434079	3434465	.	-	.	ID=GCA000010485_03377_gene;locus_tag=GCA000010485_03377;gene=tusD
contig_1	Pyrodigal	CDS	3434079	3434465	.	-	0	ID=GCA000010485_03377;Name=sulfurtransferase complex subunit TusD;locus_tag=GCA000010485_03377;product=sulfurtransferase complex subunit TusD;Dbxref=GO:0002143,GO:0008033,GO:0016783,GO:0097163,GO:1990228;gene=tusD;Parent=GCA000010485_03377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1553,COG:J,KEGG:K07235,RefSeq:WP_001209693.1,SO:0001217,UniParc:UPI000187BE0F,UniRef:UniRef100_B7UK55,UniRef:UniRef50_P45532,UniRef:UniRef90_P45532;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	3434465	3435187	.	-	.	ID=GCA000010485_03378_gene;locus_tag=GCA000010485_03378;gene=yheO
contig_1	Pyrodigal	CDS	3434465	3435187	.	-	0	ID=GCA000010485_03378;Name=putative protein YheO;locus_tag=GCA000010485_03378;product=putative protein YheO;Dbxref=GO:0005829;gene=yheO;Parent=GCA000010485_03378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2964,COG:K,RefSeq:WP_000091466.1,SO:0001217,UniParc:UPI000013B215,UniRef:UniRef100_P64624,UniRef:UniRef50_P64624,UniRef:UniRef90_P64624
contig_1	Pyrodigal	gene	3435354	3436166	.	-	.	ID=GCA000010485_03379_gene;locus_tag=GCA000010485_03379;gene=fkpA
contig_1	Pyrodigal	CDS	3435354	3436166	.	-	0	ID=GCA000010485_03379;Name=FKBP-type peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000010485_03379;product=FKBP-type peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0003755,GO:0006457,GO:0042597,GO:0140839,GO:0140840;gene=fkpA;Parent=GCA000010485_03379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0545,COG:O,RefSeq:WP_000838261.1,SO:0001217,UniParc:UPI000012A825,UniRef:UniRef100_P65765,UniRef:UniRef50_P45523,UniRef:UniRef90_P65765;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	3436387	3436605	.	+	.	ID=GCA000010485_03380_gene;locus_tag=GCA000010485_03380;gene=slyX
contig_1	Pyrodigal	CDS	3436387	3436605	.	+	0	ID=GCA000010485_03380;Name=Protein SlyX;locus_tag=GCA000010485_03380;product=Protein SlyX;gene=slyX;Parent=GCA000010485_03380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2900,COG:S,RefSeq:WP_001153615.1,SO:0001217,UniParc:UPI0000135A48,UniRef:UniRef100_P0A8R4,UniRef:UniRef50_P0A8R4,UniRef:UniRef90_P0A8R4
contig_1	Pyrodigal	gene	3436654	3437244	.	-	.	ID=GCA000010485_03381_gene;locus_tag=GCA000010485_03381;gene=slyD
contig_1	Pyrodigal	CDS	3436654	3437244	.	-	0	ID=GCA000010485_03381;Name=peptidylprolyl isomerase;locus_tag=GCA000010485_03381;product=peptidylprolyl isomerase;Dbxref=GO:0003755,GO:0005737,GO:0042026,GO:0046872,GO:0140839,GO:0140840;gene=slyD;Parent=GCA000010485_03381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000861334.1,SO:0001217,UniParc:UPI0000135A43,UniRef:UniRef100_P0A9K9,UniRef:UniRef50_P0A9K9,UniRef:UniRef90_P0A9K9;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	3437339	3437539	.	-	.	ID=GCA000010485_03382_gene;locus_tag=GCA000010485_03382;gene=yheV
contig_1	Pyrodigal	CDS	3437339	3437539	.	-	0	ID=GCA000010485_03382;Name=YheV family putative zinc ribbon protein;locus_tag=GCA000010485_03382;product=YheV family putative zinc ribbon protein;gene=yheV;Parent=GCA000010485_03382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3529,COG:R,RefSeq:WP_001007730.1,SO:0001217,UniParc:UPI000013B21C,UniRef:UniRef100_P0ADW8,UniRef:UniRef50_P0ADW8,UniRef:UniRef90_P0ADW8
contig_1	Pyrodigal	gene	3437549	3439354	.	-	.	ID=GCA000010485_03383_gene;locus_tag=GCA000010485_03383;gene=kefB
contig_1	Pyrodigal	CDS	3437549	3439354	.	-	0	ID=GCA000010485_03383;Name=glutathione-regulated potassium-efflux system protein KefB;locus_tag=GCA000010485_03383;product=glutathione-regulated potassium-efflux system protein KefB;Dbxref=GO:0005886,GO:0006813,GO:0015297,GO:0015503,GO:1902600;gene=kefB;Parent=GCA000010485_03383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1226,COG:P,RefSeq:WP_000399112.1,SO:0001217,UniParc:UPI0001C22D25,UniRef:UniRef100_A0A066SRP8,UniRef:UniRef50_P45522,UniRef:UniRef90_P45522
contig_1	Pyrodigal	gene	3439354	3439905	.	-	.	ID=GCA000010485_03384_gene;locus_tag=GCA000010485_03384;gene=kefG
contig_1	Pyrodigal	CDS	3439354	3439905	.	-	0	ID=GCA000010485_03384;Name=glutathione-regulated potassium-efflux system ancillary protein KefG;locus_tag=GCA000010485_03384;product=glutathione-regulated potassium-efflux system ancillary protein KefG;Dbxref=GO:0005886,GO:0006813,GO:0008753,GO:0009055,GO:0010181,GO:0050136,GO:1901381;gene=kefG;Parent=GCA000010485_03384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2249,COG:R,KEGG:K11748,RefSeq:WP_001297514.1,SO:0001217,UniParc:UPI00005F2842,UniRef:UniRef100_P0A756,UniRef:UniRef50_P0A756,UniRef:UniRef90_P0A756
contig_1	Pyrodigal	gene	3440036	3441949	.	+	.	ID=GCA000010485_03385_gene;locus_tag=GCA000010485_03385;gene=yheS
contig_1	Pyrodigal	CDS	3440036	3441949	.	+	0	ID=GCA000010485_03385;Name=ABC transporter ATP-binding protein;locus_tag=GCA000010485_03385;product=ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0016887;gene=yheS;Parent=GCA000010485_03385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000634830.1,SO:0001217,UniParc:UPI0001C22D26,UniRef:UniRef100_A0A066SWH1,UniRef:UniRef50_A0A0H2VBH0,UniRef:UniRef90_A0A0H2VBH0
contig_1	Pyrodigal	gene	3441949	3442971	.	+	.	ID=GCA000010485_03386_gene;locus_tag=GCA000010485_03386;gene=yheT
contig_1	Pyrodigal	CDS	3441949	3442971	.	+	0	ID=GCA000010485_03386;Name=hydrolase;locus_tag=GCA000010485_03386;product=hydrolase;Dbxref=GO:0005886,GO:0016787,GO:0034338,GO:0047372,GO:0050526;gene=yheT;Parent=GCA000010485_03386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0429,COG:R,RefSeq:WP_000057363.1,SO:0001217,UniParc:UPI0001C22D27,UniRef:UniRef100_A0A7I0KXB5,UniRef:UniRef50_P45524,UniRef:UniRef90_P45524;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3442965	3443183	.	+	.	ID=GCA000010485_03387_gene;locus_tag=GCA000010485_03387;gene=yheU
contig_1	Pyrodigal	CDS	3442965	3443183	.	+	0	ID=GCA000010485_03387;Name=YheU family protein;locus_tag=GCA000010485_03387;product=YheU family protein;gene=yheU;Parent=GCA000010485_03387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000907085.1,SO:0001217,UniParc:UPI000013B21A,UniRef:UniRef100_P67624,UniRef:UniRef50_P67624,UniRef:UniRef90_P67624
contig_1	Pyrodigal	gene	3443237	3444106	.	+	.	ID=GCA000010485_03388_gene;locus_tag=GCA000010485_03388;gene=prkB
contig_1	Pyrodigal	CDS	3443237	3444106	.	+	0	ID=GCA000010485_03388;Name=phosphoribulokinase;locus_tag=GCA000010485_03388;product=phosphoribulokinase;Dbxref=GO:0005524,GO:0005975,GO:0008974;gene=prkB;Parent=GCA000010485_03388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3954,COG:G,KEGG:K00855,RefSeq:WP_001274684.1,SO:0001217,UniParc:UPI0000D50CFB,UniRef:UniRef100_E2QFL1,UniRef:UniRef50_P0AEX5,UniRef:UniRef90_P0AEX5;ec_number=2.7.1.19
contig_1	Pyrodigal	gene	3444161	3444565	.	-	.	ID=GCA000010485_03389_gene;locus_tag=GCA000010485_03389;gene=yhfA
contig_1	Pyrodigal	CDS	3444161	3444565	.	-	0	ID=GCA000010485_03389;Name=OsmC family protein;locus_tag=GCA000010485_03389;product=OsmC family protein;gene=yhfA;Parent=GCA000010485_03389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1765,COG:R,RefSeq:WP_001148908.1,SO:0001217,UniParc:UPI000013B21F,UniRef:UniRef100_P0ADX1,UniRef:UniRef50_P0ADX1,UniRef:UniRef90_P0ADX1
contig_1	Pyrodigal	gene	3444867	3445499	.	+	.	ID=GCA000010485_03390_gene;locus_tag=GCA000010485_03390;gene=crp
contig_1	Pyrodigal	CDS	3444867	3445499	.	+	0	ID=GCA000010485_03390;Name=cAMP-activated global transcriptional regulator CRP;locus_tag=GCA000010485_03390;product=cAMP-activated global transcriptional regulator CRP;Dbxref=GO:0003680,GO:0003700,GO:0005829,GO:0006351,GO:0006355,GO:0008301,GO:0030552,GO:0032993,GO:0042802,GO:0043565,GO:0045013,GO:0045892,GO:0045893;gene=crp;Parent=GCA000010485_03390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,RefSeq:WP_000242755.1,SO:0001217,UniParc:UPI0000110C71,UniRef:UniRef100_P0ACJ8,UniRef:UniRef50_P0ACJ8,UniRef:UniRef90_P0ACJ8
contig_1	Pyrodigal	gene	3445550	3447640	.	+	.	ID=GCA000010485_03391_gene;locus_tag=GCA000010485_03391;gene=yhfK
contig_1	Pyrodigal	CDS	3445550	3447640	.	+	0	ID=GCA000010485_03391;Name=putative protein YhfK;locus_tag=GCA000010485_03391;product=putative protein YhfK;Dbxref=GO:0005886;gene=yhfK;Parent=GCA000010485_03391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296470.1,SO:0001217,UniParc:UPI00016A1C0E,UniRef:UniRef100_A0A061K9W2,UniRef:UniRef50_P45537,UniRef:UniRef90_P45537
contig_1	Pyrodigal	gene	3447707	3448927	.	-	.	ID=GCA000010485_03392_gene;locus_tag=GCA000010485_03392;gene=argD
contig_1	Pyrodigal	CDS	3447707	3448927	.	-	0	ID=GCA000010485_03392;Name=bifunctional acetylornithine/succinyldiaminopimelate transaminase;locus_tag=GCA000010485_03392;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;Dbxref=GO:0003992,GO:0005737,GO:0006526,GO:0009016,GO:0009089,GO:0030170,GO:0042802;gene=argD;Parent=GCA000010485_03392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000963792,COG:COG4992,COG:E,RefSeq:WP_000963794.1,SO:0001217,UniParc:UPI0001C22D28,UniRef:UniRef100_A0A061YLF1,UniRef:UniRef50_P40732,UniRef:UniRef90_P40732;ec_number=2.6.1.17
contig_1	Bakta	gene	3448879	3448932	.	-	.	ID=GCA000010485_03393_gene;locus_tag=GCA000010485_03393;inference=ab initio prediction:Bakta;gene=yrfJ
contig_1	Bakta	CDS	3448879	3448932	.	-	0	ID=GCA000010485_03393;Name=Protein YrfJ;locus_tag=GCA000010485_03393;product=Protein YrfJ;gene=yrfJ;Parent=GCA000010485_03393_gene;Note=RefSeq:WP_240812434.1,SO:0001217,UniParc:UPI001E25D391,UniRef:UniRef100_P0DV19,UniRef:UniRef50_P0DV19,UniRef:UniRef90_P0DV19
contig_1	Pyrodigal	gene	3449013	3449576	.	-	.	ID=GCA000010485_03394_gene;locus_tag=GCA000010485_03394;gene=pabA
contig_1	Pyrodigal	CDS	3449013	3449576	.	-	0	ID=GCA000010485_03394;Name=aminodeoxychorismate synthase component 2;locus_tag=GCA000010485_03394;product=aminodeoxychorismate synthase component 2;Dbxref=GO:0000162,GO:0008153,GO:0009356,GO:0046654,GO:0046656,GO:0046820,GO:0046982;gene=pabA;Parent=GCA000010485_03394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000601853.1,SO:0001217,UniParc:UPI00000DF14B,UniRef:UniRef100_E2QFL6,UniRef:UniRef50_P00903,UniRef:UniRef90_P00903;ec_number=2.6.1.85
contig_1	Pyrodigal	gene	3449608	3450210	.	-	.	ID=GCA000010485_03395_gene;locus_tag=GCA000010485_03395;gene=fic
contig_1	Pyrodigal	CDS	3449608	3450210	.	-	0	ID=GCA000010485_03395;Name=putative adenosine monophosphate-protein transferase Fic;locus_tag=GCA000010485_03395;product=putative adenosine monophosphate-protein transferase Fic;Dbxref=GO:0005524,GO:0051302,GO:0070733;gene=fic;Parent=GCA000010485_03395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2184,COG:T,RefSeq:WP_001280613.1,SO:0001217,UniParc:UPI0001C22D29,UniRef:UniRef100_A0A066SVR4,UniRef:UniRef50_P20605,UniRef:UniRef90_P20605;ec_number=2.7.7.108
contig_1	Pyrodigal	gene	3450200	3450367	.	-	.	ID=GCA000010485_03396_gene;locus_tag=GCA000010485_03396;gene=yhfG
contig_1	Pyrodigal	CDS	3450200	3450367	.	-	0	ID=GCA000010485_03396;Name=putative protein YhfG;locus_tag=GCA000010485_03396;product=putative protein YhfG;gene=yhfG;Parent=GCA000010485_03396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000736858.1,SO:0001217,UniParc:UPI00000DF14D,UniRef:UniRef100_E2QFL8,UniRef:UniRef50_P0ADX5,UniRef:UniRef90_P0ADX5
contig_1	Pyrodigal	gene	3450472	3451044	.	-	.	ID=GCA000010485_03397_gene;locus_tag=GCA000010485_03397;gene=ppiA
contig_1	Pyrodigal	CDS	3450472	3451044	.	-	0	ID=GCA000010485_03397;Name=peptidylprolyl isomerase A;locus_tag=GCA000010485_03397;product=peptidylprolyl isomerase A;Dbxref=GO:0006457,GO:0042597,GO:0140839,GO:0140840;gene=ppiA;Parent=GCA000010485_03397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_000477225.1,SO:0001217,UniParc:UPI0000132068,UniRef:UniRef100_P0AFL3,UniRef:UniRef50_P0AFL3,UniRef:UniRef90_P0AFL3;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	3451315	3452496	.	+	.	ID=GCA000010485_03398_gene;locus_tag=GCA000010485_03398;gene=tsgA
contig_1	Pyrodigal	CDS	3451315	3452496	.	+	0	ID=GCA000010485_03398;Name=MFS transporter TsgA;locus_tag=GCA000010485_03398;product=MFS transporter TsgA;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=tsgA;Parent=GCA000010485_03398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0738,COG:G,RefSeq:WP_000185247.1,SO:0001217,UniParc:UPI000013774C,UniRef:UniRef100_P60778,UniRef:UniRef50_P60778,UniRef:UniRef90_P60778
contig_1	Pyrodigal	gene	3452758	3455301	.	+	.	ID=GCA000010485_03399_gene;locus_tag=GCA000010485_03399;gene=nirB
contig_1	Pyrodigal	CDS	3452758	3455301	.	+	0	ID=GCA000010485_03399;Name=NADPH-nitrite reductase large subunit;locus_tag=GCA000010485_03399;product=NADPH-nitrite reductase large subunit;Dbxref=GO:0006113,GO:0006116,GO:0009344,GO:0020037,GO:0042128,GO:0046872,GO:0050660,GO:0050661,GO:0051537,GO:0051539,GO:0106316;gene=nirB;Parent=GCA000010485_03399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000049208,BlastRules:WP_000746903,COG:C,COG:COG1251,RefSeq:WP_000049213.1,SO:0001217,UniParc:UPI00000D0258,UniRef:UniRef100_C3SQF7,UniRef:UniRef50_P08201,UniRef:UniRef90_P08201;ec_number=1.7.1.4
contig_1	Pyrodigal	gene	3455298	3455624	.	+	.	ID=GCA000010485_03400_gene;locus_tag=GCA000010485_03400;gene=nirD
contig_1	Pyrodigal	CDS	3455298	3455624	.	+	0	ID=GCA000010485_03400;Name=nitrite reductase small subunit NirD;locus_tag=GCA000010485_03400;product=nitrite reductase small subunit NirD;Dbxref=GO:0005737,GO:0009344,GO:0042128,GO:0051537,GO:0106316;gene=nirD;Parent=GCA000010485_03400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2146,COG:PQ,RefSeq:WP_000084762.1,SO:0001217,UniParc:UPI00000DF14F,UniRef:UniRef100_E2QFM2,UniRef:UniRef50_P0A9I8,UniRef:UniRef90_P0A9I8;ec_number=1.7.1.15
contig_1	Pyrodigal	gene	3455751	3456557	.	+	.	ID=GCA000010485_03401_gene;locus_tag=GCA000010485_03401;gene=nirC
contig_1	Pyrodigal	CDS	3455751	3456557	.	+	0	ID=GCA000010485_03401;Name=nitrite transporter NirC;locus_tag=GCA000010485_03401;product=nitrite transporter NirC;Dbxref=GO:0005886,GO:0015499,GO:0022857,GO:0042128,GO:0055085;gene=nirC;Parent=GCA000010485_03401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,KEGG:K02598,RefSeq:WP_000493588.1,SO:0001217,UniParc:UPI00000DF150,UniRef:UniRef100_E2QFM3,UniRef:UniRef50_P0AC26,UniRef:UniRef90_P0AC26
contig_1	Pyrodigal	gene	3456576	3457949	.	+	.	ID=GCA000010485_03402_gene;locus_tag=GCA000010485_03402;gene=cysG
contig_1	Pyrodigal	CDS	3456576	3457949	.	+	0	ID=GCA000010485_03402;Name=siroheme synthase CysG;locus_tag=GCA000010485_03402;product=siroheme synthase CysG;Dbxref=GO:0004851,GO:0009236,GO:0019354,GO:0032259,GO:0043115,GO:0051266,GO:0051287;gene=cysG;Parent=GCA000010485_03402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1648,COG:H,RefSeq:WP_000349860.1,SO:0001217,UniParc:UPI00000DF151,UniRef:UniRef100_B7UK79,UniRef:UniRef50_P0AEA8,UniRef:UniRef90_P0AEA8;ec_number=4.99.1.4
contig_1	Pyrodigal	gene	3458201	3458368	.	+	.	ID=GCA000010485_03403_gene;locus_tag=GCA000010485_03403;gene=yhfL
contig_1	Pyrodigal	CDS	3458201	3458368	.	+	0	ID=GCA000010485_03403;Name=putative protein YhfL;locus_tag=GCA000010485_03403;product=putative protein YhfL;Dbxref=GO:0016020;gene=yhfL;Parent=GCA000010485_03403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001031834.1,SO:0001217,UniParc:UPI000013B224,UniRef:UniRef100_P64627,UniRef:UniRef50_P64627,UniRef:UniRef90_P64627
contig_1	Pyrodigal	gene	3458476	3459561	.	-	.	ID=GCA000010485_03404_gene;locus_tag=GCA000010485_03404;gene=yhfS
contig_1	Pyrodigal	CDS	3458476	3459561	.	-	0	ID=GCA000010485_03404;Name=putative protein YhfS;locus_tag=GCA000010485_03404;product=putative protein YhfS;Dbxref=GO:0003961,GO:0004124,GO:0006535,GO:0030170,GO:0071269;gene=yhfS;Parent=GCA000010485_03404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000847198.1,SO:0001217,UniParc:UPI0001C22D5B,UniRef:UniRef100_A0A066SRS2,UniRef:UniRef50_P45545,UniRef:UniRef90_P45545
contig_1	Pyrodigal	gene	3459573	3460877	.	-	.	ID=GCA000010485_03405_gene;locus_tag=GCA000010485_03405;gene=yhfT
contig_1	Pyrodigal	CDS	3459573	3460877	.	-	0	ID=GCA000010485_03405;Name=putative protein YhfT;locus_tag=GCA000010485_03405;product=putative protein YhfT;Dbxref=GO:0005886;gene=yhfT;Parent=GCA000010485_03405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366847.1,SO:0001217,UniParc:UPI00000DF153,UniRef:UniRef100_E2QFM7,UniRef:UniRef50_P45546,UniRef:UniRef90_P45546
contig_1	Pyrodigal	gene	3460889	3461242	.	-	.	ID=GCA000010485_03406_gene;locus_tag=GCA000010485_03406;gene=yhfU
contig_1	Pyrodigal	CDS	3460889	3461242	.	-	0	ID=GCA000010485_03406;Name=putative protein YhfU;locus_tag=GCA000010485_03406;product=putative protein YhfU;gene=yhfU;Parent=GCA000010485_03406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000719728.1,SO:0001217,UniParc:UPI00005F283D,UniRef:UniRef100_P64631,UniRef:UniRef50_P64631,UniRef:UniRef90_P64631
contig_1	Pyrodigal	gene	3461253	3462131	.	-	.	ID=GCA000010485_03407_gene;locus_tag=GCA000010485_03407;gene=php
contig_1	Pyrodigal	CDS	3461253	3462131	.	-	0	ID=GCA000010485_03407;Name=phosphotriesterase-related protein;locus_tag=GCA000010485_03407;product=phosphotriesterase-related protein;Dbxref=GO:0008270,GO:0009056,GO:0016788;gene=php;Parent=GCA000010485_03407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1735,COG:R,KEGG:K07048,RefSeq:WP_000006991.1,SO:0001217,UniParc:UPI0001C22D5C,UniRef:UniRef100_A0A066SN46,UniRef:UniRef50_P45548,UniRef:UniRef90_P45548;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3462128	3463354	.	-	.	ID=GCA000010485_03408_gene;locus_tag=GCA000010485_03408;gene=yhfW
contig_1	Pyrodigal	CDS	3462128	3463354	.	-	0	ID=GCA000010485_03408;Name=phosphopentomutase;locus_tag=GCA000010485_03408;product=phosphopentomutase;Dbxref=GO:0000287,GO:0005829,GO:0008973,GO:0009117,GO:0043094;gene=yhfW;Parent=GCA000010485_03408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1015,COG:G,KEGG:K01839,RefSeq:WP_000090646.1,SO:0001217,UniParc:UPI0001C22D5D,UniRef:UniRef100_A0A066SMV5,UniRef:UniRef50_P45549,UniRef:UniRef90_P45549;ec_number=5.4.2.7
contig_1	Pyrodigal	gene	3463355	3464518	.	-	.	ID=GCA000010485_03409_gene;locus_tag=GCA000010485_03409;gene=yhfX
contig_1	Pyrodigal	CDS	3463355	3464518	.	-	0	ID=GCA000010485_03409;Name=putative protein YhfX;locus_tag=GCA000010485_03409;product=putative protein YhfX;gene=yhfX;Parent=GCA000010485_03409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000497357.1,SO:0001217,UniParc:UPI0001C22D5E,UniRef:UniRef100_A0A061K5C4,UniRef:UniRef50_P45550,UniRef:UniRef90_P45550
contig_1	Pyrodigal	gene	3464602	3464964	.	-	.	ID=GCA000010485_03410_gene;locus_tag=GCA000010485_03410
contig_1	Pyrodigal	CDS	3464602	3464964	.	-	0	ID=GCA000010485_03410;Name=PRD domain-containing protein;locus_tag=GCA000010485_03410;product=PRD domain-containing protein;Parent=GCA000010485_03410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296472.1,SO:0001217,UniParc:UPI00005EF70B,UniRef:UniRef100_E2QFN2,UniRef:UniRef50_P45551,UniRef:UniRef90_A0A0H2V429
contig_1	Pyrodigal	gene	3464981	3465886	.	-	.	ID=GCA000010485_03411_gene;locus_tag=GCA000010485_03411;gene=yhfZ
contig_1	Pyrodigal	CDS	3464981	3465886	.	-	0	ID=GCA000010485_03411;Name=GntR family transcriptional regulator YhfZ;locus_tag=GCA000010485_03411;product=GntR family transcriptional regulator YhfZ;gene=yhfZ;Parent=GCA000010485_03411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001254831.1,SO:0001217,UniParc:UPI00005F1812,UniRef:UniRef100_A0A061YNV5,UniRef:UniRef50_P45552,UniRef:UniRef90_P45552
contig_1	Pyrodigal	gene	3466048	3467052	.	-	.	ID=GCA000010485_03412_gene;locus_tag=GCA000010485_03412;gene=trpS
contig_1	Pyrodigal	CDS	3466048	3467052	.	-	0	ID=GCA000010485_03412;Name=tryptophan--tRNA ligase;locus_tag=GCA000010485_03412;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0006436;gene=trpS;Parent=GCA000010485_03412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0180,COG:J,RefSeq:WP_000165543.1,SO:0001217,UniParc:UPI0000136721,UniRef:UniRef100_P67589,UniRef:UniRef50_P00954,UniRef:UniRef90_P00954;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	3467045	3467803	.	-	.	ID=GCA000010485_03413_gene;locus_tag=GCA000010485_03413;gene=gph
contig_1	Pyrodigal	CDS	3467045	3467803	.	-	0	ID=GCA000010485_03413;Name=phosphoglycolate phosphatase;locus_tag=GCA000010485_03413;product=phosphoglycolate phosphatase;Dbxref=GO:0000287,GO:0005829,GO:0005975,GO:0006281,GO:0008967,GO:0031404,GO:0046295;gene=gph;Parent=GCA000010485_03413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_001031711.1,SO:0001217,UniParc:UPI00005EF709,UniRef:UniRef100_E2QFN5,UniRef:UniRef50_P32662,UniRef:UniRef90_P32662;ec_number=3.1.3.18
contig_1	Pyrodigal	gene	3467796	3468473	.	-	.	ID=GCA000010485_03414_gene;locus_tag=GCA000010485_03414;gene=dam
contig_1	Pyrodigal	CDS	3467796	3468473	.	-	0	ID=GCA000010485_03414;Name=adenine-specific DNA-methyltransferase;locus_tag=GCA000010485_03414;product=adenine-specific DNA-methyltransferase;Dbxref=GO:0003676,GO:0004750,GO:0006098,GO:0009007,GO:0019323,GO:0046872;gene=dam;Parent=GCA000010485_03414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01783,RefSeq:WP_000816280.1,SO:0001217,UniParc:UPI000013461C,UniRef:UniRef100_P0AG07,UniRef:UniRef50_P0AG07,UniRef:UniRef90_P0AG07;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	3468491	3469327	.	-	.	ID=GCA000010485_03415_gene;locus_tag=GCA000010485_03415;gene=dam
contig_1	Pyrodigal	CDS	3468491	3469327	.	-	0	ID=GCA000010485_03415;Name=adenine-specific DNA-methyltransferase;locus_tag=GCA000010485_03415;product=adenine-specific DNA-methyltransferase;Dbxref=GO:0003676,GO:0004750,GO:0006098,GO:0009007,GO:0019323,GO:0046872;gene=dam;Parent=GCA000010485_03415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01783,RefSeq:WP_000742141.1,SO:0001217,UniParc:UPI00000DF15A,UniRef:UniRef100_P0AG07,UniRef:UniRef50_P0AG07,UniRef:UniRef90_P0AG07;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	3469434	3470720	.	-	.	ID=GCA000010485_03416_gene;locus_tag=GCA000010485_03416;gene=damX
contig_1	Pyrodigal	CDS	3469434	3470720	.	-	0	ID=GCA000010485_03416;Name=cell division protein DamX;locus_tag=GCA000010485_03416;product=cell division protein DamX;Dbxref=GO:0005886,GO:0008047,GO:0030428,GO:0032153,GO:0032506,GO:0042834;gene=damX;Parent=GCA000010485_03416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3266,COG:D,KEGG:K03112,RefSeq:WP_000343172.1,SO:0001217,UniParc:UPI00000DF15B,UniRef:UniRef100_A0A061K8E9,UniRef:UniRef50_P11557,UniRef:UniRef90_P11557
contig_1	Pyrodigal	gene	3470812	3471900	.	-	.	ID=GCA000010485_03417_gene;locus_tag=GCA000010485_03417;gene=aroB
contig_1	Pyrodigal	CDS	3470812	3471900	.	-	0	ID=GCA000010485_03417;Name=3-dehydroquinate synthase;locus_tag=GCA000010485_03417;product=3-dehydroquinate synthase;Dbxref=GO:0000166,GO:0003856,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0046872;gene=aroB;Parent=GCA000010485_03417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_000439853.1,SO:0001217,UniParc:UPI0001C22D5F,UniRef:UniRef100_A0A7I0KZ82,UniRef:UniRef50_P07639,UniRef:UniRef90_P07639;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	3471957	3472478	.	-	.	ID=GCA000010485_03418_gene;locus_tag=GCA000010485_03418;gene=aroK
contig_1	Pyrodigal	CDS	3471957	3472478	.	-	0	ID=GCA000010485_03418;Name=shikimate kinase AroK;locus_tag=GCA000010485_03418;product=shikimate kinase AroK;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroK;Parent=GCA000010485_03418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_000818618.1,SO:0001217,UniParc:UPI00001120EC,UniRef:UniRef100_P0A6D7,UniRef:UniRef50_P0A6D7,UniRef:UniRef90_P0A6D7;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	3472879	3474087	.	-	.	ID=GCA000010485_03419_gene;locus_tag=GCA000010485_03419;gene=hofQ
contig_1	Pyrodigal	CDS	3472879	3474087	.	-	0	ID=GCA000010485_03419;Name=DNA uptake porin HofQ;locus_tag=GCA000010485_03419;product=DNA uptake porin HofQ;Dbxref=GO:0003677,GO:0006308,GO:0009279,GO:0009306,GO:0015976,GO:0019867;gene=hofQ;Parent=GCA000010485_03419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P34749,UniRef:UniRef90_P34749
contig_1	Pyrodigal	gene	3474029	3474433	.	-	.	ID=GCA000010485_03420_gene;locus_tag=GCA000010485_03420;gene=hofP
contig_1	Pyrodigal	CDS	3474029	3474433	.	-	0	ID=GCA000010485_03420;Name=DNA utilization protein HofP;locus_tag=GCA000010485_03420;product=DNA utilization protein HofP;Dbxref=GO:0006308,GO:0015976;gene=hofP;Parent=GCA000010485_03420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001264141,KEGG:K12291,RefSeq:WP_001264137.1,SO:0001217,UniParc:UPI0001C32B3D,UniRef:UniRef100_A0A061YPZ7,UniRef:UniRef50_P45750,UniRef:UniRef90_P45750
contig_1	Pyrodigal	gene	3474423	3474863	.	-	.	ID=GCA000010485_03421_gene;locus_tag=GCA000010485_03421;gene=hofO
contig_1	Pyrodigal	CDS	3474423	3474863	.	-	0	ID=GCA000010485_03421;Name=DNA utilization protein HofO;locus_tag=GCA000010485_03421;product=DNA utilization protein HofO;Dbxref=GO:0005886,GO:0006308,GO:0015976;gene=hofO;Parent=GCA000010485_03421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001055748.1,SO:0001217,UniParc:UPI0001C22D61,UniRef:UniRef100_A0A066SN62,UniRef:UniRef50_P45751,UniRef:UniRef90_P45751
contig_1	Pyrodigal	gene	3474847	3475386	.	-	.	ID=GCA000010485_03422_gene;locus_tag=GCA000010485_03422;gene=hofN
contig_1	Pyrodigal	CDS	3474847	3475386	.	-	0	ID=GCA000010485_03422;Name=Putative DNA utilization protein HofN;locus_tag=GCA000010485_03422;product=Putative DNA utilization protein HofN;Dbxref=GO:0005886;gene=hofN;Parent=GCA000010485_03422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3166,COG:NU,RefSeq:WP_001069338.1,SO:0001217,UniParc:UPI0001C22D62,UniRef:UniRef100_A0A066SMX0,UniRef:UniRef50_P64634,UniRef:UniRef90_P64634
contig_1	Pyrodigal	gene	3475386	3476165	.	-	.	ID=GCA000010485_03423_gene;locus_tag=GCA000010485_03423;gene=hofM
contig_1	Pyrodigal	CDS	3475386	3476165	.	-	0	ID=GCA000010485_03423;Name=DNA utilization protein HofM;locus_tag=GCA000010485_03423;product=DNA utilization protein HofM;Dbxref=GO:0006308,GO:0015976;gene=hofM;Parent=GCA000010485_03423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295166,KEGG:K12288,RefSeq:WP_001296474.1,SO:0001217,UniParc:UPI00005EF704,UniRef:UniRef100_E2QFP5,UniRef:UniRef50_P45753,UniRef:UniRef90_P45753
contig_1	Pyrodigal	gene	3476285	3478837	.	+	.	ID=GCA000010485_03424_gene;locus_tag=GCA000010485_03424;gene=mrcA
contig_1	Pyrodigal	CDS	3476285	3478837	.	+	0	ID=GCA000010485_03424;Name=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;locus_tag=GCA000010485_03424;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0030288,GO:0046677,GO:0071555;gene=mrcA;Parent=GCA000010485_03424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5009,COG:M,RefSeq:WP_001296475.1,SO:0001217,UniParc:UPI000188660E,UniRef:UniRef100_A0A066SVU6,UniRef:UniRef50_P02918,UniRef:UniRef90_P02918;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	3479003	3479563	.	-	.	ID=GCA000010485_03425_gene;locus_tag=GCA000010485_03425;gene=nudE
contig_1	Pyrodigal	CDS	3479003	3479563	.	-	0	ID=GCA000010485_03425;Name=ADP compounds hydrolase NudE;locus_tag=GCA000010485_03425;product=ADP compounds hydrolase NudE;Dbxref=GO:0000287,GO:0005829,GO:0006753,GO:0016787,GO:0019144,GO:0019693,GO:0042803,GO:0047631;gene=nudE;Parent=GCA000010485_03425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,KEGG:K08312,RefSeq:WP_000045736.1,SO:0001217,UniParc:UPI00000DF162,UniRef:UniRef100_E2QFP7,UniRef:UniRef50_P45799,UniRef:UniRef90_P45799;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	3479895	3482018	.	+	.	ID=GCA000010485_03426_gene;locus_tag=GCA000010485_03426;gene=yrfF
contig_1	Pyrodigal	CDS	3479895	3482018	.	+	0	ID=GCA000010485_03426;Name=intracellular growth attenuator protein IgaA;locus_tag=GCA000010485_03426;product=intracellular growth attenuator protein IgaA;Dbxref=GO:0005886;gene=yrfF;Parent=GCA000010485_03426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000104094,SO:0001217,UniRef:UniRef50_P45800,UniRef:UniRef90_P45800
contig_1	Pyrodigal	gene	3482083	3482751	.	+	.	ID=GCA000010485_03427_gene;locus_tag=GCA000010485_03427;gene=yrfG
contig_1	Pyrodigal	CDS	3482083	3482751	.	+	0	ID=GCA000010485_03427;Name=GMP/IMP nucleotidase;locus_tag=GCA000010485_03427;product=GMP/IMP nucleotidase;Dbxref=GO:0005829,GO:0006281,GO:0008967,GO:0046872,GO:0106411;gene=yrfG;Parent=GCA000010485_03427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,KEGG:K20881,RefSeq:WP_001295168.1,SO:0001217,UniParc:UPI000013BFD6,UniRef:UniRef100_P64636,UniRef:UniRef50_P64636,UniRef:UniRef90_P64636;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	3482762	3483163	.	+	.	ID=GCA000010485_03428_gene;locus_tag=GCA000010485_03428;gene=hslR
contig_1	Pyrodigal	CDS	3482762	3483163	.	+	0	ID=GCA000010485_03428;Name=ribosome-associated heat shock protein Hsp15;locus_tag=GCA000010485_03428;product=ribosome-associated heat shock protein Hsp15;Dbxref=GO:0003677,GO:0003727,GO:0005829,GO:0009408,GO:0034605,GO:0043023;gene=hslR;Parent=GCA000010485_03428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1188,COG:J,KEGG:K04762,RefSeq:WP_000660487.1,SO:0001217,UniParc:UPI0001885910,UniRef:UniRef100_A0A061YHK8,UniRef:UniRef50_P0ACG8,UniRef:UniRef90_P0ACG8
contig_1	Pyrodigal	gene	3483188	3484066	.	+	.	ID=GCA000010485_03429_gene;locus_tag=GCA000010485_03429;gene=hslO
contig_1	Pyrodigal	CDS	3483188	3484066	.	+	0	ID=GCA000010485_03429;Name=Hsp33 family molecular chaperone HslO;locus_tag=GCA000010485_03429;product=Hsp33 family molecular chaperone HslO;Dbxref=GO:0005737,GO:0006457,GO:0042026,GO:0044183,GO:0051082;gene=hslO;Parent=GCA000010485_03429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1281,COG:O,KEGG:K04083,RefSeq:WP_001545655.1,SO:0001217,UniParc:UPI0001C22D64,UniRef:UniRef100_A0A7I0KX71,UniRef:UniRef50_P0A6Y5,UniRef:UniRef90_P0A6Y5
contig_1	Pyrodigal	gene	3484189	3485337	.	-	.	ID=GCA000010485_03430_gene;locus_tag=GCA000010485_03430;gene=tnpB
contig_1	Pyrodigal	CDS	3484189	3485337	.	-	0	ID=GCA000010485_03430;Name=IS200/IS605 family element transposase accessory protein TnpB;locus_tag=GCA000010485_03430;product=IS200/IS605 family element transposase accessory protein TnpB;gene=tnpB;Parent=GCA000010485_03430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545656.1,SO:0001217,UniParc:UPI0001C22D65,UniRef:UniRef100_UPI0024DEC73F,UniRef:UniRef50_A0A5E4RDM1,UniRef:UniRef90_A0A797LYY3
contig_1	Pyrodigal	gene	3485696	3487420	.	-	.	ID=GCA000010485_03431_gene;locus_tag=GCA000010485_03431;gene=yhgE
contig_1	Pyrodigal	CDS	3485696	3487420	.	-	0	ID=GCA000010485_03431;Name=putative protein YhgE;locus_tag=GCA000010485_03431;product=putative protein YhgE;Dbxref=GO:0005886;gene=yhgE;Parent=GCA000010485_03431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000370864.1,SO:0001217,UniParc:UPI0001C22D66,UniRef:UniRef100_A0A7I0KXB9,UniRef:UniRef50_P45804,UniRef:UniRef90_P45804
contig_1	Pyrodigal	gene	3487799	3489421	.	+	.	ID=GCA000010485_03432_gene;locus_tag=GCA000010485_03432;gene=pckA
contig_1	Pyrodigal	CDS	3487799	3489421	.	+	0	ID=GCA000010485_03432;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA000010485_03432;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA000010485_03432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,RefSeq:WP_001265681.1,SO:0001217,UniParc:UPI000004A360,UniRef:UniRef100_P22259,UniRef:UniRef50_P22259,UniRef:UniRef90_P22259;ec_number=4.1.1.49
contig_1	Pyrodigal	gene	3489498	3490850	.	-	.	ID=GCA000010485_03433_gene;locus_tag=GCA000010485_03433;gene=envZ
contig_1	Pyrodigal	CDS	3489498	3490850	.	-	0	ID=GCA000010485_03433;Name=two-component system sensor histidine kinase EnvZ;locus_tag=GCA000010485_03433;product=two-component system sensor histidine kinase EnvZ;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0016310;gene=envZ;Parent=GCA000010485_03433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,RefSeq:WP_001253709.1,SO:0001217,UniParc:UPI0001888D77,UniRef:UniRef100_A0A061YHL2,UniRef:UniRef50_P0AEJ4,UniRef:UniRef90_P0AEJ4;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3490847	3491566	.	-	.	ID=GCA000010485_03434_gene;locus_tag=GCA000010485_03434;gene=ompR
contig_1	Pyrodigal	CDS	3490847	3491566	.	-	0	ID=GCA000010485_03434;Name=two-component system response regulator OmpR;locus_tag=GCA000010485_03434;product=two-component system response regulator OmpR;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0003677,GO:0005829,GO:0006355,GO:0032993;gene=ompR;Parent=GCA000010485_03434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001157751.1,SO:0001217,UniParc:UPI0000000AFA,UniRef:UniRef100_P0AA16,UniRef:UniRef50_P0AA16,UniRef:UniRef90_P0AA16
contig_1	Pyrodigal	gene	3491794	3492270	.	+	.	ID=GCA000010485_03435_gene;locus_tag=GCA000010485_03435;gene=greB
contig_1	Pyrodigal	CDS	3491794	3492270	.	+	0	ID=GCA000010485_03435;Name=transcription elongation factor GreB;locus_tag=GCA000010485_03435;product=transcription elongation factor GreB;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greB;Parent=GCA000010485_03435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,KEGG:K04760,RefSeq:WP_000856744.1,SO:0001217,UniParc:UPI000012BABE,UniRef:UniRef100_P64274,UniRef:UniRef50_P30128,UniRef:UniRef90_P30128
contig_1	Pyrodigal	gene	3492367	3494688	.	+	.	ID=GCA000010485_03436_gene;locus_tag=GCA000010485_03436;gene=yhgF
contig_1	Pyrodigal	CDS	3492367	3494688	.	+	0	ID=GCA000010485_03436;Name=Protein YhgF;locus_tag=GCA000010485_03436;product=Protein YhgF;Dbxref=GO:0000049,GO:0003723,GO:0003729,GO:0003735,GO:0005829,GO:0006139,GO:0006412,GO:0010212;gene=yhgF;Parent=GCA000010485_03436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,RefSeq:WP_000980735.1,SO:0001217,UniParc:UPI0002A3F3AC,UniRef:UniRef100_A0A3K2YFI0,UniRef:UniRef50_P46837,UniRef:UniRef90_P46837
contig_1	Pyrodigal	gene	3495126	3495353	.	+	.	ID=GCA000010485_03437_gene;locus_tag=GCA000010485_03437;gene=feoA
contig_1	Pyrodigal	CDS	3495126	3495353	.	+	0	ID=GCA000010485_03437;Name=ferrous iron transporter A;locus_tag=GCA000010485_03437;product=ferrous iron transporter A;Dbxref=GO:0005737,GO:0006826,GO:0006974,GO:0046914;gene=feoA;Parent=GCA000010485_03437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1918,COG:P,RefSeq:WP_001200455.1,SO:0001217,UniParc:UPI000012A641,UniRef:UniRef100_P0AEL3,UniRef:UniRef50_P0AEL3,UniRef:UniRef90_P0AEL3
contig_1	Pyrodigal	gene	3495370	3497691	.	+	.	ID=GCA000010485_03438_gene;locus_tag=GCA000010485_03438;gene=feoB
contig_1	Pyrodigal	CDS	3495370	3497691	.	+	0	ID=GCA000010485_03438;Name=Fe(2+) transporter permease subunit FeoB;locus_tag=GCA000010485_03438;product=Fe(2+) transporter permease subunit FeoB;Dbxref=GO:0005525,GO:0005886,GO:0006826,GO:0015093,GO:0016020;gene=feoB;Parent=GCA000010485_03438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000737042.1,SO:0001217,UniParc:UPI000058E329,UniRef:UniRef100_Q8FCT7,UniRef:UniRef50_P33650,UniRef:UniRef90_Q8FCT7
contig_1	Pyrodigal	gene	3497702	3497938	.	+	.	ID=GCA000010485_03439_gene;locus_tag=GCA000010485_03439;gene=feoC
contig_1	Pyrodigal	CDS	3497702	3497938	.	+	0	ID=GCA000010485_03439;Name=[Fe-S]-dependent transcriptional repressor FeoC;locus_tag=GCA000010485_03439;product=[Fe-S]-dependent transcriptional repressor FeoC;Dbxref=GO:0003677,GO:0005506,GO:0051536;gene=feoC;Parent=GCA000010485_03439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000157585.1,SO:0001217,UniParc:UPI00005EF6FB,UniRef:UniRef100_B7MDN6,UniRef:UniRef50_P64638,UniRef:UniRef90_P64638
contig_1	Pyrodigal	gene	3498219	3498581	.	+	.	ID=GCA000010485_03440_gene;locus_tag=GCA000010485_03440
contig_1	Pyrodigal	CDS	3498219	3498581	.	+	0	ID=GCA000010485_03440;Name=Transposase (putative) YhgA-like domain-containing protein;locus_tag=GCA000010485_03440;product=Transposase (putative) YhgA-like domain-containing protein;Parent=GCA000010485_03440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2Z3XCL0,UniRef:UniRef90_F4T4U7
contig_1	Pyrodigal	gene	3498610	3499380	.	-	.	ID=GCA000010485_03441_gene;locus_tag=GCA000010485_03441;gene=bioH
contig_1	Pyrodigal	CDS	3498610	3499380	.	-	0	ID=GCA000010485_03441;Name=pimeloyl-ACP methyl ester esterase BioH;locus_tag=GCA000010485_03441;product=pimeloyl-ACP methyl ester esterase BioH;Dbxref=GO:0005737,GO:0009102,GO:0052689,GO:0090499;gene=bioH;Parent=GCA000010485_03441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_001060084.1,SO:0001217,UniParc:UPI00000DF173,UniRef:UniRef100_Q8FCT4,UniRef:UniRef50_P13001,UniRef:UniRef90_P13001;ec_number=3.1.1.85
contig_1	Pyrodigal	gene	3499418	3500101	.	+	.	ID=GCA000010485_03442_gene;locus_tag=GCA000010485_03442;gene=gntX
contig_1	Pyrodigal	CDS	3499418	3500101	.	+	0	ID=GCA000010485_03442;Name=DNA utilization protein GntX;locus_tag=GCA000010485_03442;product=DNA utilization protein GntX;Dbxref=GO:0006308,GO:0009116,GO:0015976;gene=gntX;Parent=GCA000010485_03442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02242,RefSeq:WP_001296478.1,SO:0001217,UniParc:UPI0001C22D90,UniRef:UniRef100_A0A061KAF0,UniRef:UniRef50_P46846,UniRef:UniRef90_P46846
contig_1	Pyrodigal	gene	3500160	3500735	.	+	.	ID=GCA000010485_03443_gene;locus_tag=GCA000010485_03443;gene=nfuA
contig_1	Pyrodigal	CDS	3500160	3500735	.	+	0	ID=GCA000010485_03443;Name=NfuA family Fe-S biogenesis protein;locus_tag=GCA000010485_03443;product=NfuA family Fe-S biogenesis protein;Dbxref=GO:0005506,GO:0016226,GO:0051539,GO:0051604;gene=nfuA;Parent=GCA000010485_03443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005410314,BlastRules:WP_009874494,BlastRules:WP_011091592,BlastRules:WP_011126831,BlastRules:WP_011283110,BlastRules:WP_011672727,BlastRules:WP_011737804,BlastRules:WP_041943809,COG:COG0694,COG:O,RefSeq:WP_000619389.1,SO:0001217,UniParc:UPI000013B241,UniRef:UniRef100_P63020,UniRef:UniRef50_P63020,UniRef:UniRef90_P63020
contig_1	Pyrodigal	gene	3501099	3502415	.	+	.	ID=GCA000010485_03444_gene;locus_tag=GCA000010485_03444;gene=gntT
contig_1	Pyrodigal	CDS	3501099	3502415	.	+	0	ID=GCA000010485_03444;Name=gluconate transporter;locus_tag=GCA000010485_03444;product=gluconate transporter;Dbxref=GO:0005886,GO:0015128,GO:0016020,GO:0035429,GO:0046177;gene=gntT;Parent=GCA000010485_03444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_001131752.1,SO:0001217,UniParc:UPI0001C22D91,UniRef:UniRef100_A0A3L4RNP8,UniRef:UniRef50_P39835,UniRef:UniRef90_P39835
contig_1	Pyrodigal	gene	3502526	3504610	.	-	.	ID=GCA000010485_03445_gene;locus_tag=GCA000010485_03445;gene=malQ
contig_1	Pyrodigal	CDS	3502526	3504610	.	-	0	ID=GCA000010485_03445;Name=4-alpha-glucanotransferase;locus_tag=GCA000010485_03445;product=4-alpha-glucanotransferase;Dbxref=GO:0000025,GO:0004134,GO:0005829,GO:0005975,GO:0005978,GO:0005980;gene=malQ;Parent=GCA000010485_03445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1640,COG:G,KEGG:K00705,RefSeq:WP_000444306.1,SO:0001217,UniParc:UPI0001C22D92,UniRef:UniRef100_A0A641BMT7,UniRef:UniRef50_P15977,UniRef:UniRef90_P15977;ec_number=2.4.1.25
contig_1	Pyrodigal	gene	3504620	3507013	.	-	.	ID=GCA000010485_03446_gene;locus_tag=GCA000010485_03446;gene=malP
contig_1	Pyrodigal	CDS	3504620	3507013	.	-	0	ID=GCA000010485_03446;Name=maltodextrin phosphorylase;locus_tag=GCA000010485_03446;product=maltodextrin phosphorylase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0005980,GO:0008184,GO:0030170,GO:0030980,GO:0031220,GO:0042803;gene=malP;Parent=GCA000010485_03446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0058,COG:G,RefSeq:WP_000081922.1,SO:0001217,UniParc:UPI0001C22D93,UniRef:UniRef100_A0A7I0L6M6,UniRef:UniRef50_P00490,UniRef:UniRef90_P00490;ec_number=2.4.1.1
contig_1	Pyrodigal	gene	3507636	3510341	.	+	.	ID=GCA000010485_03447_gene;locus_tag=GCA000010485_03447;gene=malT
contig_1	Pyrodigal	CDS	3507636	3510341	.	+	0	ID=GCA000010485_03447;Name=HTH-type transcriptional regulator MalT;locus_tag=GCA000010485_03447;product=HTH-type transcriptional regulator MalT;Dbxref=GO:0003677,GO:0003700,GO:0005515,GO:0005524,GO:0006355,GO:0045893,GO:0045913;gene=malT;Parent=GCA000010485_03447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2909,COG:K,KEGG:K03556,RefSeq:WP_000906975.1,SO:0001217,UniParc:UPI0001C22D94,UniRef:UniRef100_A0A3H9K7X0,UniRef:UniRef50_P06993,UniRef:UniRef90_P06993
contig_1	Pyrodigal	gene	3510384	3510830	.	-	.	ID=GCA000010485_03448_gene;locus_tag=GCA000010485_03448
contig_1	Pyrodigal	CDS	3510384	3510830	.	-	0	ID=GCA000010485_03448;Name=RNA 3'-terminal-phosphate cyclase (ATP);locus_tag=GCA000010485_03448;product=RNA 3'-terminal-phosphate cyclase (ATP);Parent=GCA000010485_03448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E8B910,UniRef:UniRef100_A0AA36L1L7,UniRef:UniRef50_A0AA36L1L7,UniRef:UniRef90_A0AA36L1L7
contig_1	Pyrodigal	gene	3510835	3511170	.	+	.	ID=GCA000010485_03449_gene;locus_tag=GCA000010485_03449;gene=rtcR
contig_1	Pyrodigal	CDS	3510835	3511170	.	+	0	ID=GCA000010485_03449;Name=RNA repair transcriptional activator RtcR;locus_tag=GCA000010485_03449;product=RNA repair transcriptional activator RtcR;Dbxref=GO:0000160,GO:0003677,GO:0003700,GO:0005524,GO:0006355,GO:0008134,GO:0016887,GO:0045893;gene=rtcR;Parent=GCA000010485_03449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14414,SO:0001217,UniParc:UPI0001E8B911,UniRef:UniRef100_A0A6D0HCS2,UniRef:UniRef50_P38035,UniRef:UniRef90_P38035
contig_1	Pyrodigal	gene	3511152	3511910	.	-	.	ID=GCA000010485_03450_gene;locus_tag=GCA000010485_03450;gene=glpR
contig_1	Pyrodigal	CDS	3511152	3511910	.	-	0	ID=GCA000010485_03450;Name=DeoR/GlpR family transcriptional regulator;locus_tag=GCA000010485_03450;product=DeoR/GlpR family transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0006071;gene=glpR;Parent=GCA000010485_03450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02444,RefSeq:WP_001296480.1,SO:0001217,UniParc:UPI0000DAD050,UniRef:UniRef100_E2QFS1,UniRef:UniRef50_P0ACL0,UniRef:UniRef90_P0ACL0
contig_1	Pyrodigal	gene	3511927	3512757	.	-	.	ID=GCA000010485_03451_gene;locus_tag=GCA000010485_03451;gene=glpG
contig_1	Pyrodigal	CDS	3511927	3512757	.	-	0	ID=GCA000010485_03451;Name=rhomboid family intramembrane serine protease GlpG;locus_tag=GCA000010485_03451;product=rhomboid family intramembrane serine protease GlpG;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0016020;gene=glpG;Parent=GCA000010485_03451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,RefSeq:WP_000928734.1,SO:0001217,UniParc:UPI000188877B,UniRef:UniRef100_B7NMI8,UniRef:UniRef50_P09391,UniRef:UniRef90_P09391;ec_number=3.4.21.105
contig_1	Pyrodigal	gene	3512802	3513128	.	-	.	ID=GCA000010485_03452_gene;locus_tag=GCA000010485_03452;gene=glpE
contig_1	Pyrodigal	CDS	3512802	3513128	.	-	0	ID=GCA000010485_03452;Name=thiosulfate sulfurtransferase GlpE;locus_tag=GCA000010485_03452;product=thiosulfate sulfurtransferase GlpE;Dbxref=GO:0004792;gene=glpE;Parent=GCA000010485_03452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000371927.1,SO:0001217,UniParc:UPI0001C22D96,UniRef:UniRef100_A0A3K3NB93,UniRef:UniRef50_P0A6V5,UniRef:UniRef90_A0A2B7LT74;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	3513318	3514823	.	+	.	ID=GCA000010485_03453_gene;locus_tag=GCA000010485_03453;gene=glpD
contig_1	Pyrodigal	CDS	3513318	3514823	.	+	0	ID=GCA000010485_03453;Name=glycerol-3-phosphate dehydrogenase;locus_tag=GCA000010485_03453;product=glycerol-3-phosphate dehydrogenase;Dbxref=GO:0004368,GO:0006072,GO:0009331;gene=glpD;Parent=GCA000010485_03453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,RefSeq:WP_000448164.1,SO:0001217,UniParc:UPI0001C22D97,UniRef:UniRef100_A0A066SN12,UniRef:UniRef50_P13035,UniRef:UniRef90_A0A0J5PN85;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	3514877	3515482	.	-	.	ID=GCA000010485_03454_gene;locus_tag=GCA000010485_03454
contig_1	Pyrodigal	CDS	3514877	3515482	.	-	0	ID=GCA000010485_03454;Name=Ybl142;locus_tag=GCA000010485_03454;product=Ybl142;Parent=GCA000010485_03454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033839.1,SO:0001217,UniParc:UPI0001C22D98,UniRef:UniRef100_A0A061KA23,UniRef:UniRef50_B7L4V6,UniRef:UniRef90_B7L4V6
contig_1	Pyrodigal	gene	3515485	3516252	.	-	.	ID=GCA000010485_03455_gene;locus_tag=GCA000010485_03455
contig_1	Pyrodigal	CDS	3515485	3516252	.	-	0	ID=GCA000010485_03455;Name=Phage protein;locus_tag=GCA000010485_03455;product=Phage protein;Parent=GCA000010485_03455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000553742.1,SO:0001217,UniParc:UPI0001C22D99,UniRef:UniRef100_A0A066T4S1,UniRef:UniRef50_S1P5Y7,UniRef:UniRef90_A0A444R087
contig_1	Pyrodigal	gene	3516355	3517860	.	-	.	ID=GCA000010485_03456_gene;locus_tag=GCA000010485_03456
contig_1	Pyrodigal	CDS	3516355	3517860	.	-	0	ID=GCA000010485_03456;Name=Phosphate-binding protein;locus_tag=GCA000010485_03456;product=Phosphate-binding protein;Parent=GCA000010485_03456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22D9A,UniRef:UniRef100_A0A192CEF9,UniRef:UniRef50_A0A0H3MLF0,UniRef:UniRef90_A0A192CEF9
contig_1	Pyrodigal	gene	3517988	3520435	.	-	.	ID=GCA000010485_03457_gene;locus_tag=GCA000010485_03457;gene=glgP
contig_1	Pyrodigal	CDS	3517988	3520435	.	-	0	ID=GCA000010485_03457;Name=glycogen phosphorylase;locus_tag=GCA000010485_03457;product=glycogen phosphorylase;Dbxref=GO:0005737,GO:0005975,GO:0005980,GO:0008184,GO:0030170,GO:0031220,GO:0042803;gene=glgP;Parent=GCA000010485_03457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0058,COG:G,RefSeq:WP_000993445.1,SO:0001217,UniParc:UPI0001C22D9B,UniRef:UniRef100_A0A066SWE1,UniRef:UniRef50_P0AC86,UniRef:UniRef90_P0AC86;ec_number=2.4.1.1
contig_1	Pyrodigal	gene	3520454	3521887	.	-	.	ID=GCA000010485_03458_gene;locus_tag=GCA000010485_03458;gene=glgA
contig_1	Pyrodigal	CDS	3520454	3521887	.	-	0	ID=GCA000010485_03458;Name=glycogen synthase GlgA;locus_tag=GCA000010485_03458;product=glycogen synthase GlgA;Dbxref=GO:0004373,GO:0005829,GO:0005978,GO:0009011;gene=glgA;Parent=GCA000010485_03458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0297,COG:G,RefSeq:WP_001197646.1,SO:0001217,UniParc:UPI000012B595,UniRef:UniRef100_P0A6U8,UniRef:UniRef50_P0A6U8,UniRef:UniRef90_P0A6U8;ec_number=2.4.1.21
contig_1	Pyrodigal	gene	3521887	3523182	.	-	.	ID=GCA000010485_03459_gene;locus_tag=GCA000010485_03459;gene=glgC
contig_1	Pyrodigal	CDS	3521887	3523182	.	-	0	ID=GCA000010485_03459;Name=glucose-1-phosphate adenylyltransferase;locus_tag=GCA000010485_03459;product=glucose-1-phosphate adenylyltransferase;Dbxref=GO:0005524,GO:0005978,GO:0008878;gene=glgC;Parent=GCA000010485_03459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0448,COG:G,KEGG:K00975,RefSeq:WP_000253971.1,SO:0001217,UniParc:UPI0000E82609,UniRef:UniRef100_B7MDR5,UniRef:UniRef50_P0A6V1,UniRef:UniRef90_P0A6V1;ec_number=2.7.7.27
contig_1	Pyrodigal	gene	3523200	3525173	.	-	.	ID=GCA000010485_03460_gene;locus_tag=GCA000010485_03460;gene=glgX
contig_1	Pyrodigal	CDS	3523200	3525173	.	-	0	ID=GCA000010485_03460;Name=glycogen debranching protein GlgX;locus_tag=GCA000010485_03460;product=glycogen debranching protein GlgX;Dbxref=GO:0004133,GO:0004553,GO:0005980;gene=glgX;Parent=GCA000010485_03460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1523,COG:G,KEGG:K01214,RefSeq:WP_000192563.1,SO:0001217,UniParc:UPI0001C22D9C,UniRef:UniRef100_A0A066T4Z0,UniRef:UniRef50_P15067,UniRef:UniRef90_P15067;ec_number=3.2.1.196
contig_1	Pyrodigal	gene	3525170	3527356	.	-	.	ID=GCA000010485_03461_gene;locus_tag=GCA000010485_03461;gene=glgB
contig_1	Pyrodigal	CDS	3525170	3527356	.	-	0	ID=GCA000010485_03461;Name=1%2C4-alpha-glucan branching enzyme;locus_tag=GCA000010485_03461;product=1%2C4-alpha-glucan branching enzyme;Dbxref=GO:0003844,GO:0004553,GO:0005829,GO:0005978,GO:0043169;gene=glgB;Parent=GCA000010485_03461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0296,COG:G,KEGG:K00700,RefSeq:WP_001283713.1,SO:0001217,UniParc:UPI0000D50D26,UniRef:UniRef100_A1AGW5,UniRef:UniRef50_P07762,UniRef:UniRef90_P07762;ec_number=2.4.1.18
contig_1	Bakta	gene	3527514	3527555	.	-	.	ID=GCA000010485_03462_gene;locus_tag=GCA000010485_03462;inference=ab initio prediction:Bakta;gene=yhgO
contig_1	Bakta	CDS	3527514	3527555	.	-	0	ID=GCA000010485_03462;Name=Protein YhgO;locus_tag=GCA000010485_03462;product=Protein YhgO;gene=yhgO;Parent=GCA000010485_03462_gene;Note=RefSeq:WP_211180509.1,SO:0001217,UniParc:UPI00107E63F2,UniRef:UniRef100_P0DSG6,UniRef:UniRef50_P0DSG6,UniRef:UniRef90_P0DSG6
contig_1	Pyrodigal	gene	3527629	3528732	.	-	.	ID=GCA000010485_03463_gene;locus_tag=GCA000010485_03463;gene=asd
contig_1	Pyrodigal	CDS	3527629	3528732	.	-	0	ID=GCA000010485_03463;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000010485_03463;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0019877,GO:0046983,GO:0050661,GO:0051287,GO:0071266;gene=asd;Parent=GCA000010485_03463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_000799949.1,SO:0001217,UniParc:UPI000034E5E2,UniRef:UniRef100_Q8FCR6,UniRef:UniRef50_P0A9Q9,UniRef:UniRef90_P0A9Q9;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	3528924	3529517	.	+	.	ID=GCA000010485_03464_gene;locus_tag=GCA000010485_03464;gene=yhgN
contig_1	Pyrodigal	CDS	3528924	3529517	.	+	0	ID=GCA000010485_03464;Name=NAAT family transporter YhgN;locus_tag=GCA000010485_03464;product=NAAT family transporter YhgN;Dbxref=GO:0005886,GO:0016020;gene=yhgN;Parent=GCA000010485_03464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001002544,COG:COG2095,COG:E,KEGG:K05595,RefSeq:WP_001002551.1,SO:0001217,UniParc:UPI00000DF182,UniRef:UniRef100_E2QFU1,UniRef:UniRef50_P67143,UniRef:UniRef90_P67143
contig_1	Pyrodigal	gene	3529563	3530765	.	-	.	ID=GCA000010485_03465_gene;locus_tag=GCA000010485_03465;gene=dprA
contig_1	Pyrodigal	CDS	3529563	3530765	.	-	0	ID=GCA000010485_03465;Name=DNA processing protein DprA;locus_tag=GCA000010485_03465;product=DNA processing protein DprA;gene=dprA;Parent=GCA000010485_03465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,SO:0001217,UniParc:UPI00019F393B,UniRef:UniRef100_A0A3L5QNN5,UniRef:UniRef50_A0A6N3HGE4,UniRef:UniRef90_A0A6N3HGE4
contig_1	Pyrodigal	gene	3530765	3532864	.	-	.	ID=GCA000010485_03466_gene;locus_tag=GCA000010485_03466;gene=recQ
contig_1	Pyrodigal	CDS	3530765	3532864	.	-	0	ID=GCA000010485_03466;Name=ATP-dependent DNA helicase RecQ;locus_tag=GCA000010485_03466;product=ATP-dependent DNA helicase RecQ;gene=recQ;Parent=GCA000010485_03466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22D9D,UniRef:UniRef100_A0A061K5I6,UniRef:UniRef50_A0A0E1IQ42,UniRef:UniRef90_A0A0E1IQ42
contig_1	Pyrodigal	gene	3533002	3534342	.	-	.	ID=GCA000010485_03467_gene;locus_tag=GCA000010485_03467;gene=gntU
contig_1	Pyrodigal	CDS	3533002	3534342	.	-	0	ID=GCA000010485_03467;Name=gluconate transporter;locus_tag=GCA000010485_03467;product=gluconate transporter;Dbxref=GO:0005402,GO:0005886,GO:0015128,GO:0016020,GO:0019521,GO:0035429;gene=gntU;Parent=GCA000010485_03467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,KEGG:K06156,RefSeq:WP_000210122.1,SO:0001217,UniParc:UPI00000DF185,UniRef:UniRef100_E2QFU2,UniRef:UniRef50_P0AC96,UniRef:UniRef90_P0AC96
contig_1	Pyrodigal	gene	3534346	3534873	.	-	.	ID=GCA000010485_03468_gene;locus_tag=GCA000010485_03468;gene=gntK
contig_1	Pyrodigal	CDS	3534346	3534873	.	-	0	ID=GCA000010485_03468;Name=gluconokinase;locus_tag=GCA000010485_03468;product=gluconokinase;Dbxref=GO:0005524,GO:0042803,GO:0046177,GO:0046316;gene=gntK;Parent=GCA000010485_03468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3265,COG:G,RefSeq:WP_000108320.1,SO:0001217,UniParc:UPI00016088F2,UniRef:UniRef100_A0A086UX75,UniRef:UniRef50_P46859,UniRef:UniRef90_P46859;ec_number=2.7.1.12
contig_1	Pyrodigal	gene	3535012	3536007	.	-	.	ID=GCA000010485_03469_gene;locus_tag=GCA000010485_03469;gene=gntR
contig_1	Pyrodigal	CDS	3535012	3536007	.	-	0	ID=GCA000010485_03469;Name=gluconate operon transcriptional repressor GntR;locus_tag=GCA000010485_03469;product=gluconate operon transcriptional repressor GntR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0006974,GO:0045892,GO:0045893,GO:0046177;gene=gntR;Parent=GCA000010485_03469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,KEGG:K06145,RefSeq:WP_000730252.1,SO:0001217,UniParc:UPI000012B8D7,UniRef:UniRef100_P0ACP5,UniRef:UniRef50_P0ACP5,UniRef:UniRef90_P0ACP5
contig_1	Pyrodigal	gene	3536100	3536795	.	-	.	ID=GCA000010485_03470_gene;locus_tag=GCA000010485_03470;gene=yhhW
contig_1	Pyrodigal	CDS	3536100	3536795	.	-	0	ID=GCA000010485_03470;Name=quercetin 2%2C3-dioxygenase;locus_tag=GCA000010485_03470;product=quercetin 2%2C3-dioxygenase;Dbxref=GO:0008127,GO:0046872;gene=yhhW;Parent=GCA000010485_03470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000639811,COG:COG1741,COG:R,RefSeq:WP_000639815.1,SO:0001217,UniParc:UPI0001C22DCF,UniRef:UniRef100_A0A061KA38,UniRef:UniRef50_P46852,UniRef:UniRef90_P46852;ec_number=1.13.11.24
contig_1	Pyrodigal	gene	3536918	3537955	.	-	.	ID=GCA000010485_03471_gene;locus_tag=GCA000010485_03471;gene=yhhX
contig_1	Pyrodigal	CDS	3536918	3537955	.	-	0	ID=GCA000010485_03471;Name=oxidoreductase;locus_tag=GCA000010485_03471;product=oxidoreductase;Dbxref=GO:0000166,GO:0005829,GO:0017000,GO:0102497;gene=yhhX;Parent=GCA000010485_03471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000236275.1,SO:0001217,UniParc:UPI0001C22DD0,UniRef:UniRef100_A0A061K5J1,UniRef:UniRef50_P46853,UniRef:UniRef90_P46853;ec_number=1.-.-.-
contig_1	Infernal	gene	3538074	3538138	.	-	.	ID=GCA000010485_03472_gene;locus_tag=GCA000010485_03472;gene=ryhB
contig_1	Infernal	ncRNA	3538074	3538138	5.1e-13	-	.	ID=GCA000010485_03472;Name=RyhB RNA;locus_tag=GCA000010485_03472;gene=ryhB;product=RyhB RNA;Dbxref=RFAM:RF00057;Parent=GCA000010485_03472_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00057
contig_1	Pyrodigal	gene	3538289	3538777	.	+	.	ID=GCA000010485_03473_gene;locus_tag=GCA000010485_03473;gene=yhhY
contig_1	Pyrodigal	CDS	3538289	3538777	.	+	0	ID=GCA000010485_03473;Name=N-acetyltransferase;locus_tag=GCA000010485_03473;product=N-acetyltransferase;Dbxref=GO:0008080,GO:0016747,GO:0050176,GO:0103045;gene=yhhY;Parent=GCA000010485_03473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03825,RefSeq:WP_001296483.1,SO:0001217,UniParc:UPI0000DAD05C,UniRef:UniRef100_A0A061K5Y3,UniRef:UniRef50_P46854,UniRef:UniRef90_P46854;ec_number=2.3.1.53
contig_1	Pyrodigal	gene	3538838	3540571	.	-	.	ID=GCA000010485_03474_gene;locus_tag=GCA000010485_03474;gene=ggt
contig_1	Pyrodigal	CDS	3538838	3540571	.	-	0	ID=GCA000010485_03474;Name=gamma-glutamyltransferase;locus_tag=GCA000010485_03474;product=gamma-glutamyltransferase;Dbxref=GO:0006750,GO:0006751,GO:0030288,GO:0034722,GO:0036374,GO:0042597,GO:0043102,GO:0097264,GO:0103068;gene=ggt;Parent=GCA000010485_03474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0405,COG:E,RefSeq:WP_000595142.1,SO:0001217,UniParc:UPI0001C22DD1,UniRef:UniRef100_A0A066SWG2,UniRef:UniRef50_P18956,UniRef:UniRef90_P18956;ec_number=3.4.19.13
contig_1	Pyrodigal	gene	3540691	3541131	.	+	.	ID=GCA000010485_03475_gene;locus_tag=GCA000010485_03475;gene=yhhA
contig_1	Pyrodigal	CDS	3540691	3541131	.	+	0	ID=GCA000010485_03475;Name=DUF2756 domain-containing protein;locus_tag=GCA000010485_03475;product=DUF2756 domain-containing protein;gene=yhhA;Parent=GCA000010485_03475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000826133.1,SO:0001217,UniParc:UPI00005EF6DF,UniRef:UniRef100_E2QFV2,UniRef:UniRef50_P0ADX7,UniRef:UniRef90_P0ADX7
contig_1	Pyrodigal	gene	3541118	3541861	.	-	.	ID=GCA000010485_03476_gene;locus_tag=GCA000010485_03476;gene=ugpQ
contig_1	Pyrodigal	CDS	3541118	3541861	.	-	0	ID=GCA000010485_03476;Name=glycerophosphodiester phosphodiesterase;locus_tag=GCA000010485_03476;product=glycerophosphodiester phosphodiesterase;Dbxref=GO:0000287,GO:0005737,GO:0006071,GO:0006629,GO:0008081,GO:0008889,GO:0047389,GO:0047395;gene=ugpQ;Parent=GCA000010485_03476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01126,RefSeq:WP_000073605.1,SO:0001217,UniParc:UPI0001C22DD2,UniRef:UniRef100_A0A061KA42,UniRef:UniRef50_P10908,UniRef:UniRef90_P10908;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	3541858	3542928	.	-	.	ID=GCA000010485_03477_gene;locus_tag=GCA000010485_03477;gene=ugpC
contig_1	Pyrodigal	CDS	3541858	3542928	.	-	0	ID=GCA000010485_03477;Name=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;locus_tag=GCA000010485_03477;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;Dbxref=GO:0001407,GO:0005524,GO:0008643,GO:0015430,GO:0016887,GO:0055052;gene=ugpC;Parent=GCA000010485_03477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000907792,COG:COG3839,COG:G,RefSeq:WP_000907823.1,SO:0001217,UniParc:UPI0001C22DD3,UniRef:UniRef100_A0A066T504,UniRef:UniRef50_P10907,UniRef:UniRef90_P10907;ec_number=7.6.2.10
contig_1	Pyrodigal	gene	3542930	3543775	.	-	.	ID=GCA000010485_03478_gene;locus_tag=GCA000010485_03478;gene=ugpE
contig_1	Pyrodigal	CDS	3542930	3543775	.	-	0	ID=GCA000010485_03478;Name=sn-glycerol-3-phosphate ABC transporter permease UgpE;locus_tag=GCA000010485_03478;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;Dbxref=GO:0005886,GO:0015169,GO:0015794,GO:0016020,GO:0055052,GO:1902517;gene=ugpE;Parent=GCA000010485_03478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0395,COG:G,RefSeq:WP_000572183.1,SO:0001217,UniParc:UPI00000DF190,UniRef:UniRef100_A1AGY2,UniRef:UniRef50_P10906,UniRef:UniRef90_P10906;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3543772	3544659	.	-	.	ID=GCA000010485_03479_gene;locus_tag=GCA000010485_03479;gene=ugpA
contig_1	Pyrodigal	CDS	3543772	3544659	.	-	0	ID=GCA000010485_03479;Name=sn-glycerol-3-phosphate ABC transporter permease UgpA;locus_tag=GCA000010485_03479;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;Dbxref=GO:0005886,GO:0055085;gene=ugpA;Parent=GCA000010485_03479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1175,COG:G,RefSeq:WP_001141184.1,SO:0001217,UniParc:UPI0001C22DD4,UniRef:UniRef100_A0A061K8L6,UniRef:UniRef50_P10905,UniRef:UniRef90_P10905;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3544757	3546073	.	-	.	ID=GCA000010485_03480_gene;locus_tag=GCA000010485_03480;gene=ugpB
contig_1	Pyrodigal	CDS	3544757	3546073	.	-	0	ID=GCA000010485_03480;Name=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;locus_tag=GCA000010485_03480;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;Dbxref=GO:0030288,GO:0055085;gene=ugpB;Parent=GCA000010485_03480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1653,COG:G,KEGG:K05813,RefSeq:WP_000803580.1,SO:0001217,UniParc:UPI00000E4A8A,UniRef:UniRef100_Q8CVL9,UniRef:UniRef50_P0AG80,UniRef:UniRef90_P0AG80;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3546470	3547183	.	-	.	ID=GCA000010485_03481_gene;locus_tag=GCA000010485_03481;gene=livF
contig_1	Pyrodigal	CDS	3546470	3547183	.	-	0	ID=GCA000010485_03481;Name=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;locus_tag=GCA000010485_03481;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;Dbxref=GO:0005524,GO:0015658,GO:0015807,GO:0016887;gene=livF;Parent=GCA000010485_03481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0410,COG:E,RefSeq:WP_000416895.1,SO:0001217,UniParc:UPI000018FB34,UniRef:UniRef100_C3SPH2,UniRef:UniRef50_P22731,UniRef:UniRef90_P22731;ec_number=7.4.2.2
contig_1	Pyrodigal	gene	3547185	3547952	.	-	.	ID=GCA000010485_03482_gene;locus_tag=GCA000010485_03482;gene=livG
contig_1	Pyrodigal	CDS	3547185	3547952	.	-	0	ID=GCA000010485_03482;Name=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;locus_tag=GCA000010485_03482;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;Dbxref=GO:0005304,GO:0005524,GO:0005886,GO:0015188,GO:0015190,GO:0015192,GO:0015658,GO:0015803,GO:0015808,GO:0015823,GO:0016020,GO:0016887,GO:0042941,GO:0055052,GO:1903714,GO:1903785,GO:1903805,GO:1903806;gene=livG;Parent=GCA000010485_03482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000082101,RefSeq:WP_000082101.1,SO:0001217,UniParc:UPI000012E73B,UniRef:UniRef100_P0A9S7,UniRef:UniRef50_P0A9S7,UniRef:UniRef90_P0A9S7;ec_number=7.4.2.2
contig_1	Pyrodigal	gene	3547949	3549226	.	-	.	ID=GCA000010485_03483_gene;locus_tag=GCA000010485_03483;gene=livM
contig_1	Pyrodigal	CDS	3547949	3549226	.	-	0	ID=GCA000010485_03483;Name=branched chain amino acid ABC transporter permease LivM;locus_tag=GCA000010485_03483;product=branched chain amino acid ABC transporter permease LivM;gene=livM;Parent=GCA000010485_03483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000803813,RefSeq:WP_000803819.1,SO:0001217,UniParc:UPI00000DF194,UniRef:UniRef100_A0A066SWH3,UniRef:UniRef50_P22729,UniRef:UniRef90_A0A066SWH3;ec_number=7.4.2.2
contig_1	Pyrodigal	gene	3549223	3550149	.	-	.	ID=GCA000010485_03484_gene;locus_tag=GCA000010485_03484;gene=livH
contig_1	Pyrodigal	CDS	3549223	3550149	.	-	0	ID=GCA000010485_03484;Name=high-affinity branched-chain amino acid ABC transporter permease LivH;locus_tag=GCA000010485_03484;product=high-affinity branched-chain amino acid ABC transporter permease LivH;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015192,GO:0015808,GO:0015823,GO:0016020,GO:0022857,GO:0042941,GO:0055085,GO:1903785,GO:1903801,GO:1903806;gene=livH;Parent=GCA000010485_03484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0559,COG:E,RefSeq:WP_001295097.1,SO:0001217,UniParc:UPI00000DF195,UniRef:UniRef100_A0A061K8M0,UniRef:UniRef50_P0AEX7,UniRef:UniRef90_P0AEX7;ec_number=7.4.2.2
contig_1	Pyrodigal	gene	3550197	3551387	.	-	.	ID=GCA000010485_03485_gene;locus_tag=GCA000010485_03485;gene=livK
contig_1	Pyrodigal	CDS	3550197	3551387	.	-	0	ID=GCA000010485_03485;Name=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;locus_tag=GCA000010485_03485;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;Dbxref=GO:0006865,GO:0042597;gene=livK;Parent=GCA000010485_03485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000822976,COG:COG0683,COG:E,SO:0001217,UniParc:UPI0002185A44,UniRef:UniRef100_A0A061KAJ2,UniRef:UniRef50_P0AD96,UniRef:UniRef90_P04816
contig_1	Pyrodigal	gene	3551729	3552112	.	+	.	ID=GCA000010485_03486_gene;locus_tag=GCA000010485_03486;gene=panM
contig_1	Pyrodigal	CDS	3551729	3552112	.	+	0	ID=GCA000010485_03486;Name=aspartate 1-decarboxylase autocleavage activator PanM;locus_tag=GCA000010485_03486;product=aspartate 1-decarboxylase autocleavage activator PanM;Dbxref=GO:0008080,GO:0015940,GO:0031638;gene=panM;Parent=GCA000010485_03486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778796.1,SO:0001217,UniParc:UPI0000D50D35,UniRef:UniRef100_A0A066SWU7,UniRef:UniRef50_P37613,UniRef:UniRef90_A0A066SWU7
contig_1	Pyrodigal	gene	3552109	3552636	.	-	.	ID=GCA000010485_03487_gene;locus_tag=GCA000010485_03487
contig_1	Pyrodigal	CDS	3552109	3552636	.	-	0	ID=GCA000010485_03487;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000010485_03487;product=N-acetyltransferase domain-containing protein;Parent=GCA000010485_03487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000342452.1,SO:0001217,UniParc:UPI0001C22DD6,UniRef:UniRef100_A0A061K5K9,UniRef:UniRef50_Q8XED1,UniRef:UniRef90_Q8XED1
contig_1	Pyrodigal	gene	3552643	3552909	.	-	.	ID=GCA000010485_03488_gene;locus_tag=GCA000010485_03488
contig_1	Pyrodigal	CDS	3552643	3552909	.	-	0	ID=GCA000010485_03488;Name=DUF1778 domain-containing protein;locus_tag=GCA000010485_03488;product=DUF1778 domain-containing protein;Parent=GCA000010485_03488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001277107.1,SO:0001217,UniParc:UPI0001C22DD7,UniRef:UniRef100_A0A061YQ57,UniRef:UniRef50_J7QA90,UniRef:UniRef90_J7QA90
contig_1	Pyrodigal	gene	3553058	3554161	.	-	.	ID=GCA000010485_03489_gene;locus_tag=GCA000010485_03489;gene=livJ
contig_1	Pyrodigal	CDS	3553058	3554161	.	-	0	ID=GCA000010485_03489;Name=branched chain amino acid ABC transporter substrate-binding protein LivJ;locus_tag=GCA000010485_03489;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;Dbxref=GO:0015803,GO:0015818,GO:0015820,GO:0015829,GO:0016020,GO:0030288,GO:0055052;gene=livJ;Parent=GCA000010485_03489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001021996,COG:COG0683,COG:E,RefSeq:WP_001021994.1,SO:0001217,UniParc:UPI00016A0458,UniRef:UniRef100_A0A193RQH9,UniRef:UniRef50_P0AD96,UniRef:UniRef90_P0AD96
contig_1	Pyrodigal	gene	3554432	3555286	.	-	.	ID=GCA000010485_03490_gene;locus_tag=GCA000010485_03490;gene=rpoH
contig_1	Pyrodigal	CDS	3554432	3555286	.	-	0	ID=GCA000010485_03490;Name=RNA polymerase sigma factor RpoH;locus_tag=GCA000010485_03490;product=RNA polymerase sigma factor RpoH;Dbxref=GO:0000345,GO:0001000,GO:0001046,GO:0001216,GO:0003677,GO:0003700,GO:0005829,GO:0005886,GO:0006310,GO:0006351,GO:0006352,GO:0006355,GO:0009009,GO:0009408,GO:0010468,GO:0016987,GO:0031421,GO:2000142;gene=rpoH;Parent=GCA000010485_03490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,RefSeq:WP_000130217.1,SO:0001217,UniParc:UPI0000134562,UniRef:UniRef100_P0AGB3,UniRef:UniRef50_P0AGB3,UniRef:UniRef90_P0AGB3
contig_1	Pyrodigal	gene	3555531	3556589	.	-	.	ID=GCA000010485_03491_gene;locus_tag=GCA000010485_03491;gene=ftsX
contig_1	Pyrodigal	CDS	3555531	3556589	.	-	0	ID=GCA000010485_03491;Name=permease-like cell division protein FtsX;locus_tag=GCA000010485_03491;product=permease-like cell division protein FtsX;Dbxref=GO:0000910,GO:0005886,GO:0009276,GO:0032153,GO:0051301;gene=ftsX;Parent=GCA000010485_03491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2177,COG:D,RefSeq:WP_001042003.1,SO:0001217,UniParc:UPI000012ACFE,UniRef:UniRef100_P0AC30,UniRef:UniRef50_P0AC30,UniRef:UniRef90_P0AC30
contig_1	Pyrodigal	gene	3556582	3557250	.	-	.	ID=GCA000010485_03492_gene;locus_tag=GCA000010485_03492;gene=ftsY
contig_1	Pyrodigal	CDS	3556582	3557250	.	-	0	ID=GCA000010485_03492;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000010485_03492;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0005524,GO:0005886,GO:0006614,GO:0009306,GO:0016887,GO:0022857,GO:0051301;gene=ftsY;Parent=GCA000010485_03492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2884,COG:D,KEGG:K03110,RefSeq:WP_000617723.1,SO:0001217,UniParc:UPI000012ACC2,UniRef:UniRef100_P0A9R7,UniRef:UniRef50_P0A9R7,UniRef:UniRef90_P0A9R7
contig_1	Pyrodigal	gene	3557253	3558749	.	-	.	ID=GCA000010485_03493_gene;locus_tag=GCA000010485_03493;gene=ftsY
contig_1	Pyrodigal	CDS	3557253	3558749	.	-	0	ID=GCA000010485_03493;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000010485_03493;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0006614,GO:0009306;gene=ftsY;Parent=GCA000010485_03493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03110,RefSeq:WP_001040681.1,SO:0001217,UniParc:UPI0001C22DD8,UniRef:UniRef100_A0A061K605,UniRef:UniRef50_A0A0Q3ISF8,UniRef:UniRef90_A0A271U9A4
contig_1	Pyrodigal	gene	3558899	3559495	.	+	.	ID=GCA000010485_03494_gene;locus_tag=GCA000010485_03494;gene=rsmD
contig_1	Pyrodigal	CDS	3558899	3559495	.	+	0	ID=GCA000010485_03494;Name=16S rRNA (guanine(966)-N(2))-methyltransferase;locus_tag=GCA000010485_03494;product=16S rRNA (guanine(966)-N(2))-methyltransferase;Dbxref=GO:0003676,GO:0008168,GO:0031167,GO:0052913,GO:0070475;gene=rsmD;Parent=GCA000010485_03494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,KEGG:K08316,RefSeq:WP_000743189.1,SO:0001217,UniParc:UPI00005EF4F1,UniRef:UniRef100_A0A066T4W3,UniRef:UniRef50_P0ADX9,UniRef:UniRef90_P0ADX9;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	3559485	3559754	.	+	.	ID=GCA000010485_03495_gene;locus_tag=GCA000010485_03495;gene=yhhL
contig_1	Pyrodigal	CDS	3559485	3559754	.	+	0	ID=GCA000010485_03495;Name=DUF1145 domain-containing protein;locus_tag=GCA000010485_03495;product=DUF1145 domain-containing protein;gene=yhhL;Parent=GCA000010485_03495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3776,COG:S,KEGG:K08993,RefSeq:WP_001295207.1,SO:0001217,UniParc:UPI00000D0B3E,UniRef:UniRef100_C3SPB2,UniRef:UniRef50_P37614,UniRef:UniRef90_P37614
contig_1	Pyrodigal	gene	3559757	3560116	.	-	.	ID=GCA000010485_03496_gene;locus_tag=GCA000010485_03496;gene=yhhM
contig_1	Pyrodigal	CDS	3559757	3560116	.	-	0	ID=GCA000010485_03496;Name=putative protein YhhM;locus_tag=GCA000010485_03496;product=putative protein YhhM;gene=yhhM;Parent=GCA000010485_03496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000042886.1,SO:0001217,UniParc:UPI00000DF19B,UniRef:UniRef100_E2QFX1,UniRef:UniRef50_P37615,UniRef:UniRef90_P37615
contig_1	Pyrodigal	gene	3560257	3560883	.	+	.	ID=GCA000010485_03497_gene;locus_tag=GCA000010485_03497;gene=yhhN
contig_1	Pyrodigal	CDS	3560257	3560883	.	+	0	ID=GCA000010485_03497;Name=putative membrane protein YhhN;locus_tag=GCA000010485_03497;product=putative membrane protein YhhN;Dbxref=GO:0005886,GO:0016787;gene=yhhN;Parent=GCA000010485_03497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000964718.1,SO:0001217,UniParc:UPI000013B251,UniRef:UniRef100_P0ADI9,UniRef:UniRef50_P0ADI9,UniRef:UniRef90_P0ADI9
contig_1	Pyrodigal	gene	3560957	3563155	.	+	.	ID=GCA000010485_03498_gene;locus_tag=GCA000010485_03498;gene=zntA
contig_1	Pyrodigal	CDS	3560957	3563155	.	+	0	ID=GCA000010485_03498;Name=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;locus_tag=GCA000010485_03498;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;Dbxref=GO:0005215,GO:0005524,GO:0005886,GO:0006812,GO:0008551,GO:0016020,GO:0016463,GO:0016887,GO:0019829,GO:0046872;gene=zntA;Parent=GCA000010485_03498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_000106576.1,SO:0001217,UniParc:UPI0001C22DD9,UniRef:UniRef100_A0A7I0KX15,UniRef:UniRef50_P37617,UniRef:UniRef90_P37617;ec_number=7.2.2.21
contig_1	Pyrodigal	gene	3563257	3563502	.	-	.	ID=GCA000010485_03499_gene;locus_tag=GCA000010485_03499;gene=tusA
contig_1	Pyrodigal	CDS	3563257	3563502	.	-	0	ID=GCA000010485_03499;Name=sulfurtransferase TusA;locus_tag=GCA000010485_03499;product=sulfurtransferase TusA;Dbxref=GO:0002143,GO:0005737,GO:0097163;gene=tusA;Parent=GCA000010485_03499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_000130621.1,SO:0001217,UniParc:UPI0000110F5D,UniRef:UniRef100_P0A890,UniRef:UniRef50_P0A890,UniRef:UniRef90_P0A890;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	3563723	3564388	.	+	.	ID=GCA000010485_03500_gene;locus_tag=GCA000010485_03500;gene=yhhQ
contig_1	Pyrodigal	CDS	3563723	3564388	.	+	0	ID=GCA000010485_03500;Name=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;locus_tag=GCA000010485_03500;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;Dbxref=GO:0005886,GO:0022857,GO:0072531,GO:1990397;gene=yhhQ;Parent=GCA000010485_03500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,RefSeq:WP_001100463.1,SO:0001217,UniParc:UPI00000DF19D,UniRef:UniRef100_E2QFX5,UniRef:UniRef50_P37619,UniRef:UniRef90_P37619
contig_1	Pyrodigal	gene	3564461	3565018	.	+	.	ID=GCA000010485_03501_gene;locus_tag=GCA000010485_03501;gene=dcrB
contig_1	Pyrodigal	CDS	3564461	3565018	.	+	0	ID=GCA000010485_03501;Name=phage sensitivity protein DcrB;locus_tag=GCA000010485_03501;product=phage sensitivity protein DcrB;Dbxref=GO:0005886;gene=dcrB;Parent=GCA000010485_03501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001245295,KEGG:K27311,RefSeq:WP_001245296.1,SO:0001217,UniParc:UPI00005EF4EF,UniRef:UniRef100_E2QFX6,UniRef:UniRef50_P0AEE1,UniRef:UniRef90_P0AEE1
contig_1	Pyrodigal	gene	3565022	3566272	.	-	.	ID=GCA000010485_03502_gene;locus_tag=GCA000010485_03502;gene=yhhS
contig_1	Pyrodigal	CDS	3565022	3566272	.	-	0	ID=GCA000010485_03502;Name=putative MFS-type transporter YhhS;locus_tag=GCA000010485_03502;product=putative MFS-type transporter YhhS;Dbxref=GO:0005886,GO:0022857;gene=yhhS;Parent=GCA000010485_03502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001314207.1,SO:0001217,UniParc:UPI000209A81B,UniRef:UniRef100_A0A3P1DLJ0,UniRef:UniRef50_P37621,UniRef:UniRef90_P37621
contig_1	Pyrodigal	gene	3566371	3567420	.	+	.	ID=GCA000010485_03503_gene;locus_tag=GCA000010485_03503;gene=yhhT
contig_1	Pyrodigal	CDS	3566371	3567420	.	+	0	ID=GCA000010485_03503;Name=Putative transport protein YhhT;locus_tag=GCA000010485_03503;product=Putative transport protein YhhT;Dbxref=GO:0005886,GO:0055085;gene=yhhT;Parent=GCA000010485_03503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11744,RefSeq:WP_001545658.1,SO:0001217,UniParc:UPI0001C22DDB,UniRef:UniRef100_A0A3K3NG27,UniRef:UniRef50_P0AGM0,UniRef:UniRef90_P0AGM0
contig_1	Pyrodigal	gene	3567475	3568062	.	+	.	ID=GCA000010485_03504_gene;locus_tag=GCA000010485_03504;gene=acpT
contig_1	Pyrodigal	CDS	3567475	3568062	.	+	0	ID=GCA000010485_03504;Name=4'-phosphopantetheinyl transferase AcpT;locus_tag=GCA000010485_03504;product=4'-phosphopantetheinyl transferase AcpT;Dbxref=GO:0000287,GO:0005829,GO:0006633,GO:0008897,GO:0019878;gene=acpT;Parent=GCA000010485_03504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_000285789.1,SO:0001217,UniParc:UPI00000DF1A0,UniRef:UniRef100_E2QFX9,UniRef:UniRef50_P37623,UniRef:UniRef90_P37623;ec_number=2.7.8.7
contig_1	Pyrodigal	gene	3568173	3569747	.	+	.	ID=GCA000010485_03505_gene;locus_tag=GCA000010485_03505;gene=nikA
contig_1	Pyrodigal	CDS	3568173	3569747	.	+	0	ID=GCA000010485_03505;Name=nickel ABC transporter substrate-binding protein;locus_tag=GCA000010485_03505;product=nickel ABC transporter substrate-binding protein;Dbxref=GO:0009897,GO:0015413,GO:0015675,GO:0015833,GO:0016020,GO:0016151,GO:0020037,GO:0030288,GO:0042597,GO:0046914,GO:0050919,GO:0051540,GO:0055052,GO:0098716,GO:1904680;gene=nikA;Parent=GCA000010485_03505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000493122.1,SO:0001217,UniParc:UPI00000E4A8E,UniRef:UniRef100_E2QFY0,UniRef:UniRef50_P33590,UniRef:UniRef90_P33590;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	3569747	3570691	.	+	.	ID=GCA000010485_03506_gene;locus_tag=GCA000010485_03506;gene=nikB
contig_1	Pyrodigal	CDS	3569747	3570691	.	+	0	ID=GCA000010485_03506;Name=nickel ABC transporter permease subunit NikB;locus_tag=GCA000010485_03506;product=nickel ABC transporter permease subunit NikB;Dbxref=GO:0005886,GO:0015099,GO:0016020,GO:0016151,GO:0055052,GO:0071916,GO:0098716;gene=nikB;Parent=GCA000010485_03506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000947068.1,SO:0001217,UniParc:UPI00001681C2,UniRef:UniRef100_P33591,UniRef:UniRef50_P33591,UniRef:UniRef90_P33591;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	3570688	3571521	.	+	.	ID=GCA000010485_03507_gene;locus_tag=GCA000010485_03507;gene=nikC
contig_1	Pyrodigal	CDS	3570688	3571521	.	+	0	ID=GCA000010485_03507;Name=nickel ABC transporter permease subunit NikC;locus_tag=GCA000010485_03507;product=nickel ABC transporter permease subunit NikC;Dbxref=GO:0005886,GO:0015099,GO:0016020,GO:0016151,GO:0055052,GO:0055085,GO:0071916,GO:0098716;gene=nikC;Parent=GCA000010485_03507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_001008957.1,SO:0001217,UniParc:UPI0001887898,UniRef:UniRef100_A0A0V9RVK0,UniRef:UniRef50_P0AFA9,UniRef:UniRef90_P0AFA9;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	3571521	3572285	.	+	.	ID=GCA000010485_03508_gene;locus_tag=GCA000010485_03508;gene=nikD
contig_1	Pyrodigal	CDS	3571521	3572285	.	+	0	ID=GCA000010485_03508;Name=nickel import ATP-binding protein NikD;locus_tag=GCA000010485_03508;product=nickel import ATP-binding protein NikD;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0015675,GO:0016151,GO:0016887,GO:0043190;gene=nikD;Parent=GCA000010485_03508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_001136234.1,SO:0001217,UniParc:UPI0001C22DDC,UniRef:UniRef100_A0A641BLB6,UniRef:UniRef50_P33593,UniRef:UniRef90_P33593;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	3572282	3573088	.	+	.	ID=GCA000010485_03509_gene;locus_tag=GCA000010485_03509;gene=nikE
contig_1	Pyrodigal	CDS	3572282	3573088	.	+	0	ID=GCA000010485_03509;Name=nickel import ATP-binding protein NikE;locus_tag=GCA000010485_03509;product=nickel import ATP-binding protein NikE;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0015675,GO:0016151,GO:0016887,GO:0043190;gene=nikE;Parent=GCA000010485_03509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000173682.1,SO:0001217,UniParc:UPI0001C22BD8,UniRef:UniRef100_A0A641E3C3,UniRef:UniRef50_P33594,UniRef:UniRef90_P33594;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	3573094	3573495	.	+	.	ID=GCA000010485_03510_gene;locus_tag=GCA000010485_03510;gene=nikE
contig_1	Pyrodigal	CDS	3573094	3573495	.	+	0	ID=GCA000010485_03510;Name=nickel import ATP-binding protein NikE;locus_tag=GCA000010485_03510;product=nickel import ATP-binding protein NikE;Dbxref=GO:0003700,GO:0005524,GO:0005886,GO:0010045,GO:0015413,GO:0015675,GO:0016151,GO:0043190,GO:0043565;gene=nikE;Parent=GCA000010485_03510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0864,COG:K,KEGG:K07722,RefSeq:WP_001190062.1,SO:0001217,UniParc:UPI0000130181,UniRef:UniRef100_P0A6Z6,UniRef:UniRef50_P0A6Z6,UniRef:UniRef90_P0A6Z6;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	3573559	3573654	.	-	.	ID=GCA000010485_03511_gene;locus_tag=GCA000010485_03511
contig_1	Pyrodigal	CDS	3573559	3573654	.	-	0	ID=GCA000010485_03511;Name=hypothetical protein;locus_tag=GCA000010485_03511;product=hypothetical protein;Parent=GCA000010485_03511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E17A8D,UniRef:UniRef100_A0AA36P7M1,UniRef:UniRef50_A0A2I5SUS9,UniRef:UniRef90_A0A2I5SUS9
contig_1	Pyrodigal	gene	3573694	3574440	.	+	.	ID=GCA000010485_03512_gene;locus_tag=GCA000010485_03512
contig_1	Pyrodigal	CDS	3573694	3574440	.	+	0	ID=GCA000010485_03512;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000010485_03512;product=HTH gntR-type domain-containing protein;Parent=GCA000010485_03512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296489.1,SO:0001217,UniParc:UPI000191E7CB,UniRef:UniRef100_E2QFY6,UniRef:UniRef50_R2R8K0,UniRef:UniRef90_A0A2S4RUV3
contig_1	Pyrodigal	gene	3574465	3574938	.	+	.	ID=GCA000010485_03513_gene;locus_tag=GCA000010485_03513;gene=ptsN
contig_1	Pyrodigal	CDS	3574465	3574938	.	+	0	ID=GCA000010485_03513;Name=PTS sugar transporter subunit IIA;locus_tag=GCA000010485_03513;product=PTS sugar transporter subunit IIA;gene=ptsN;Parent=GCA000010485_03513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_001161648.1,SO:0001217,UniParc:UPI0001C22BD9,UniRef:UniRef100_A0A066SWK4,UniRef:UniRef50_A0A4R1N7F5,UniRef:UniRef90_A0A0D7CAA6
contig_1	Pyrodigal	gene	3574935	3575216	.	+	.	ID=GCA000010485_03514_gene;locus_tag=GCA000010485_03514
contig_1	Pyrodigal	CDS	3574935	3575216	.	+	0	ID=GCA000010485_03514;Name=PTS system transporter subunit IIB;locus_tag=GCA000010485_03514;product=PTS system transporter subunit IIB;Parent=GCA000010485_03514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000084021.1,SO:0001217,UniParc:UPI0000D50D43,UniRef:UniRef100_A0A376VCC8,UniRef:UniRef50_A0A376VCC8,UniRef:UniRef90_A0A376VCC8
contig_1	Pyrodigal	gene	3575293	3576651	.	+	.	ID=GCA000010485_03515_gene;locus_tag=GCA000010485_03515
contig_1	Pyrodigal	CDS	3575293	3576651	.	+	0	ID=GCA000010485_03515;Name=PTS EIIC type-2 domain-containing protein;locus_tag=GCA000010485_03515;product=PTS EIIC type-2 domain-containing protein;Parent=GCA000010485_03515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02775,RefSeq:WP_001545659.1,SO:0001217,UniParc:UPI0001C22BDA,UniRef:UniRef100_A0A641E1J0,UniRef:UniRef50_F5RM46,UniRef:UniRef90_A0A4R1N963
contig_1	Pyrodigal	gene	3576644	3578152	.	+	.	ID=GCA000010485_03516_gene;locus_tag=GCA000010485_03516
contig_1	Pyrodigal	CDS	3576644	3578152	.	+	0	ID=GCA000010485_03516;Name=Carbohydrate kinase;locus_tag=GCA000010485_03516;product=Carbohydrate kinase;Parent=GCA000010485_03516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545660.1,SO:0001217,UniParc:UPI0001C22BDB,UniRef:UniRef100_A0A641BKH9,UniRef:UniRef50_A0A376LD31,UniRef:UniRef90_A0A376LD31
contig_1	Pyrodigal	gene	3578142	3578411	.	+	.	ID=GCA000010485_03517_gene;locus_tag=GCA000010485_03517
contig_1	Pyrodigal	CDS	3578142	3578411	.	+	0	ID=GCA000010485_03517;Name=Phosphocarrier protein HPr;locus_tag=GCA000010485_03517;product=Phosphocarrier protein HPr;Parent=GCA000010485_03517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956441.1,SO:0001217,UniParc:UPI0001C22BDC,UniRef:UniRef100_A0A3K2YT39,UniRef:UniRef50_A0A0P7QDT7,UniRef:UniRef90_A0A0P7QDT7
contig_1	Pyrodigal	gene	3578443	3579294	.	+	.	ID=GCA000010485_03518_gene;locus_tag=GCA000010485_03518
contig_1	Pyrodigal	CDS	3578443	3579294	.	+	0	ID=GCA000010485_03518;Name=class II aldolase;locus_tag=GCA000010485_03518;product=class II aldolase;Parent=GCA000010485_03518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01624,RefSeq:WP_001131793.1,SO:0001217,UniParc:UPI0001C22BDD,UniRef:UniRef100_A0A066SWK8,UniRef:UniRef50_A0A7D8EI49,UniRef:UniRef90_A0A229ETY8;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	3579403	3580527	.	-	.	ID=GCA000010485_03519_gene;locus_tag=GCA000010485_03519;gene=yadH
contig_1	Pyrodigal	CDS	3579403	3580527	.	-	0	ID=GCA000010485_03519;Name=Transport permease protein;locus_tag=GCA000010485_03519;product=Transport permease protein;gene=yadH;Parent=GCA000010485_03519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_001296492.1,SO:0001217,UniParc:UPI000188789A,UniRef:UniRef100_A0A061YQ83,UniRef:UniRef50_A0A3S5DFR6,UniRef:UniRef90_A0A3S5DFR6
contig_1	Pyrodigal	gene	3580527	3583262	.	-	.	ID=GCA000010485_03520_gene;locus_tag=GCA000010485_03520;gene=rbbA
contig_1	Pyrodigal	CDS	3580527	3583262	.	-	0	ID=GCA000010485_03520;Name=ribosome-associated ATPase/putative transporter RbbA;locus_tag=GCA000010485_03520;product=ribosome-associated ATPase/putative transporter RbbA;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0022627,GO:0042626,GO:0043024,GO:0043190,GO:0045727,GO:0055085,GO:0060187,GO:0140359;gene=rbbA;Parent=GCA000010485_03520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000149156,RefSeq:WP_000972085.1,SO:0001217,UniParc:UPI0001C22BDE,UniRef:UniRef100_A0A7I0KWZ9,UniRef:UniRef50_P37624,UniRef:UniRef90_P37624
contig_1	Pyrodigal	gene	3583259	3584326	.	-	.	ID=GCA000010485_03521_gene;locus_tag=GCA000010485_03521;gene=yhiI
contig_1	Pyrodigal	CDS	3583259	3584326	.	-	0	ID=GCA000010485_03521;Name=putative protein YhiI;locus_tag=GCA000010485_03521;product=putative protein YhiI;Dbxref=GO:0005886;gene=yhiI;Parent=GCA000010485_03521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000361456.1,SO:0001217,UniParc:UPI0001C22BDF,UniRef:UniRef100_A0A7I0L5I7,UniRef:UniRef50_P37626,UniRef:UniRef90_P37626
contig_1	Pyrodigal	gene	3585048	3586112	.	+	.	ID=GCA000010485_03522_gene;locus_tag=GCA000010485_03522;gene=yhiM
contig_1	Pyrodigal	CDS	3585048	3586112	.	+	0	ID=GCA000010485_03522;Name=Inner membrane protein yhiM;locus_tag=GCA000010485_03522;product=Inner membrane protein yhiM;gene=yhiM;Parent=GCA000010485_03522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P37630,UniRef:UniRef90_A0A0H3EQ48
contig_1	Pyrodigal	gene	3586199	3587392	.	-	.	ID=GCA000010485_03523_gene;locus_tag=GCA000010485_03523;gene=yhiN
contig_1	Pyrodigal	CDS	3586199	3587392	.	-	0	ID=GCA000010485_03523;Name=putative protein YhiN;locus_tag=GCA000010485_03523;product=putative protein YhiN;Dbxref=GO:0005829;gene=yhiN;Parent=GCA000010485_03523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,RefSeq:WP_000439200.1,SO:0001217,UniParc:UPI0001C22BE1,UniRef:UniRef100_A0A7I0KX02,UniRef:UniRef50_P37631,UniRef:UniRef90_P37631
contig_1	Pyrodigal	gene	3587624	3589123	.	+	.	ID=GCA000010485_03524_gene;locus_tag=GCA000010485_03524;gene=pitA
contig_1	Pyrodigal	CDS	3587624	3589123	.	+	0	ID=GCA000010485_03524;Name=inorganic phosphate transporter PitA;locus_tag=GCA000010485_03524;product=inorganic phosphate transporter PitA;Dbxref=GO:0005315,GO:0005385,GO:0005886,GO:0006817,GO:0010960,GO:0015295,GO:0015654,GO:0015710,GO:0016020,GO:0035435,GO:1901683,GO:1901684;gene=pitA;Parent=GCA000010485_03524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,KEGG:K16322,RefSeq:WP_000902780.1,SO:0001217,UniParc:UPI0000131B2A,UniRef:UniRef100_P0AFJ7,UniRef:UniRef50_P0AFJ7,UniRef:UniRef90_P0AFJ7
contig_1	Pyrodigal	gene	3589194	3589529	.	-	.	ID=GCA000010485_03525_gene;locus_tag=GCA000010485_03525;gene=uspB
contig_1	Pyrodigal	CDS	3589194	3589529	.	-	0	ID=GCA000010485_03525;Name=universal stress protein UspB;locus_tag=GCA000010485_03525;product=universal stress protein UspB;Dbxref=GO:0005886;gene=uspB;Parent=GCA000010485_03525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000626182.1,SO:0001217,UniParc:UPI0001C22BE2,UniRef:UniRef100_A0A7I0KYZ2,UniRef:UniRef50_P59988,UniRef:UniRef90_A4WFT3
contig_1	Pyrodigal	gene	3589920	3590354	.	+	.	ID=GCA000010485_03526_gene;locus_tag=GCA000010485_03526;gene=uspA
contig_1	Pyrodigal	CDS	3589920	3590354	.	+	0	ID=GCA000010485_03526;Name=universal stress protein UspA;locus_tag=GCA000010485_03526;product=universal stress protein UspA;Dbxref=GO:0005737;gene=uspA;Parent=GCA000010485_03526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000323571.1,SO:0001217,UniParc:UPI0000000AA0,UniRef:UniRef100_P0AED0,UniRef:UniRef50_P0AED0,UniRef:UniRef90_P0AED0
contig_1	Pyrodigal	gene	3590671	3592140	.	+	.	ID=GCA000010485_03527_gene;locus_tag=GCA000010485_03527;gene=dtpB
contig_1	Pyrodigal	CDS	3590671	3592140	.	+	0	ID=GCA000010485_03527;Name=dipeptide/tripeptide permease DtpB;locus_tag=GCA000010485_03527;product=dipeptide/tripeptide permease DtpB;Dbxref=GO:0005886,GO:0015031,GO:0015333,GO:0042937,GO:0071916;gene=dtpB;Parent=GCA000010485_03527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001098636.1,SO:0001217,UniParc:UPI00000DF1B5,UniRef:UniRef100_C3SNY2,UniRef:UniRef50_P36837,UniRef:UniRef90_P36837
contig_1	Pyrodigal	gene	3592189	3592941	.	-	.	ID=GCA000010485_03528_gene;locus_tag=GCA000010485_03528;gene=rsmJ
contig_1	Pyrodigal	CDS	3592189	3592941	.	-	0	ID=GCA000010485_03528;Name=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;locus_tag=GCA000010485_03528;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;Dbxref=GO:0005737,GO:0008990,GO:0031167;gene=rsmJ;Parent=GCA000010485_03528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15984,RefSeq:WP_000686607.1,SO:0001217,UniParc:UPI0000470EAC,UniRef:UniRef100_B7MEJ2,UniRef:UniRef50_P68567,UniRef:UniRef90_P68567;ec_number=2.1.1.242
contig_1	Pyrodigal	gene	3592949	3594991	.	-	.	ID=GCA000010485_03529_gene;locus_tag=GCA000010485_03529;gene=prlC
contig_1	Pyrodigal	CDS	3592949	3594991	.	-	0	ID=GCA000010485_03529;Name=oligopeptidase A;locus_tag=GCA000010485_03529;product=oligopeptidase A;Dbxref=GO:0004222,GO:0005737,GO:0006508,GO:0006518,GO:0046872;gene=prlC;Parent=GCA000010485_03529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0339,COG:O,KEGG:K01414,RefSeq:WP_001296496.1,SO:0001217,UniParc:UPI0001C22BE3,UniRef:UniRef100_A0A066T0J1,UniRef:UniRef50_P27298,UniRef:UniRef90_P27298;ec_number=3.4.24.70
contig_1	Pyrodigal	gene	3595194	3596036	.	+	.	ID=GCA000010485_03530_gene;locus_tag=GCA000010485_03530;gene=rlmJ
contig_1	Pyrodigal	CDS	3595194	3596036	.	+	0	ID=GCA000010485_03530;Name=23S rRNA (adenine(2030)-N(6))-methyltransferase;locus_tag=GCA000010485_03530;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;Dbxref=GO:0003723,GO:0005829,GO:0008988,GO:0015976,GO:0036307,GO:0070475;gene=rlmJ;Parent=GCA000010485_03530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001300574,COG:COG2961,COG:J,KEGG:K07115,RefSeq:WP_000954225.1,SO:0001217,UniParc:UPI00005AAB52,UniRef:UniRef100_J7QIA1,UniRef:UniRef50_P37634,UniRef:UniRef90_P37634;ec_number=2.1.1.266
contig_1	Pyrodigal	gene	3596108	3597460	.	+	.	ID=GCA000010485_03531_gene;locus_tag=GCA000010485_03531;gene=gorA
contig_1	Pyrodigal	CDS	3596108	3597460	.	+	0	ID=GCA000010485_03531;Name=glutathione-disulfide reductase;locus_tag=GCA000010485_03531;product=glutathione-disulfide reductase;Dbxref=GO:0004362,GO:0005829,GO:0006749,GO:0016020,GO:0034599,GO:0045454,GO:0050660,GO:0050661,GO:0071949;gene=gorA;Parent=GCA000010485_03531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00383,RefSeq:WP_000160794.1,SO:0001217,UniParc:UPI0001C22BE4,UniRef:UniRef100_A0A066T551,UniRef:UniRef50_P06715,UniRef:UniRef90_P06715;ec_number=1.8.1.7
contig_1	Pyrodigal	gene	3597625	3597840	.	+	.	ID=GCA000010485_03532_gene;locus_tag=GCA000010485_03532
contig_1	Pyrodigal	CDS	3597625	3597840	.	+	0	ID=GCA000010485_03532;Name=hypothetical protein;locus_tag=GCA000010485_03532;product=hypothetical protein;Parent=GCA000010485_03532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A30669,UniRef:UniRef100_A0AA36L1B7,UniRef:UniRef50_A0A2K1HK41,UniRef:UniRef90_A0A2K1HK41
contig_1	Infernal	gene	3597673	3597757	.	+	.	ID=GCA000010485_03533_gene;locus_tag=GCA000010485_03533;gene=agrB
contig_1	Infernal	ncRNA	3597673	3597757	4.7e-14	+	.	ID=GCA000010485_03533;Name=ArsR-gov region gene B;locus_tag=GCA000010485_03533;gene=agrB;product=ArsR-gov region gene B;Dbxref=RFAM:RF02891;Parent=GCA000010485_03533_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02891
contig_1	Pyrodigal	gene	3597932	3598357	.	+	.	ID=GCA000010485_03534_gene;locus_tag=GCA000010485_03534;gene=arsC
contig_1	Pyrodigal	CDS	3597932	3598357	.	+	0	ID=GCA000010485_03534;Name=glutaredoxin-dependent arsenate reductase;locus_tag=GCA000010485_03534;product=glutaredoxin-dependent arsenate reductase;Dbxref=GO:0008794;gene=arsC;Parent=GCA000010485_03534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00537,NCBIProtein:AAA21096.1,RefSeq:WP_000065754.1,SO:0001217,UniParc:UPI0001C22BE5,UniRef:UniRef100_A0A066SWN0,UniRef:UniRef50_P08692,UniRef:UniRef90_B7LSY7;ec_number=1.20.4.1
contig_1	Pyrodigal	gene	3598974	3599249	.	+	.	ID=GCA000010485_03535_gene;locus_tag=GCA000010485_03535;gene=yhiS
contig_1	Pyrodigal	CDS	3598974	3599249	.	+	0	ID=GCA000010485_03535;Name=YhiS;locus_tag=GCA000010485_03535;product=YhiS;gene=yhiS;Parent=GCA000010485_03535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22BE7,UniRef:UniRef100_A0AA36L1E8,UniRef:UniRef50_A0AA36L1E8,UniRef:UniRef90_A0AA36L1E8
contig_1	Pyrodigal	gene	3599543	3600109	.	+	.	ID=GCA000010485_03536_gene;locus_tag=GCA000010485_03536;gene=slp
contig_1	Pyrodigal	CDS	3599543	3600109	.	+	0	ID=GCA000010485_03536;Name=outer membrane lipoprotein Slp;locus_tag=GCA000010485_03536;product=outer membrane lipoprotein Slp;gene=slp;Parent=GCA000010485_03536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001057453,RefSeq:WP_001057453.1,SO:0001217,UniParc:UPI0000226465,UniRef:UniRef100_A0A2X7RH11,UniRef:UniRef50_P37194,UniRef:UniRef90_A0A135PVS0
contig_1	Pyrodigal	gene	3600262	3600792	.	+	.	ID=GCA000010485_03537_gene;locus_tag=GCA000010485_03537;gene=dctR
contig_1	Pyrodigal	CDS	3600262	3600792	.	+	0	ID=GCA000010485_03537;Name=HTH-type transcriptional regulator DctR;locus_tag=GCA000010485_03537;product=HTH-type transcriptional regulator DctR;Dbxref=GO:0003677,GO:0006355;gene=dctR;Parent=GCA000010485_03537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K21901,RefSeq:WP_000478618.1,SO:0001217,UniParc:UPI00000DF1BF,UniRef:UniRef100_Q8FCK2,UniRef:UniRef50_P37195,UniRef:UniRef90_P37195
contig_1	Pyrodigal	gene	3600849	3601877	.	-	.	ID=GCA000010485_03538_gene;locus_tag=GCA000010485_03538;gene=chuS
contig_1	Pyrodigal	CDS	3600849	3601877	.	-	0	ID=GCA000010485_03538;Name=heme oxygenase ChuS;locus_tag=GCA000010485_03538;product=heme oxygenase ChuS;gene=chuS;Parent=GCA000010485_03538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3720,COG:P,RefSeq:WP_001017192.1,SO:0001217,UniParc:UPI00000439E6,UniRef:UniRef100_A0A061L7E8,UniRef:UniRef50_Q56990,UniRef:UniRef90_A0A2B7MBB7,VFDB:VFC0272,VFDB:VFG000916
contig_1	Pyrodigal	gene	3601926	3603908	.	-	.	ID=GCA000010485_03539_gene;locus_tag=GCA000010485_03539;gene=chuA
contig_1	Pyrodigal	CDS	3601926	3603908	.	-	0	ID=GCA000010485_03539;Name=Outer membrane heme/hemoglobin receptor ChuA;locus_tag=GCA000010485_03539;product=Outer membrane heme/hemoglobin receptor ChuA;gene=chuA;Parent=GCA000010485_03539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_000089583.1,SO:0001217,UniParc:UPI00000439E7,UniRef:UniRef100_A0A023L3G7,UniRef:UniRef50_A0A1M2J6K8,UniRef:UniRef90_A0A1M2J6K8,VFDB:VFC0272,VFDB:VFG000917
contig_1	Infernal	regulatory_region	3603906	3603937	3.5e-10	-	.	ID=EFPPCJGBKI_324;Name=shuA/chuA 5' UTR thermoregulator;product=shuA/chuA 5' UTR thermoregulator;Dbxref=RFAM:RF02597;inference=profile:Rfam:RF02597;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	3604592	3605506	.	+	.	ID=GCA000010485_03540_gene;locus_tag=GCA000010485_03540;gene=chuT
contig_1	Pyrodigal	CDS	3604592	3605506	.	+	0	ID=GCA000010485_03540;Name=periplasmic heme-binding protein ChuT;locus_tag=GCA000010485_03540;product=periplasmic heme-binding protein ChuT;gene=chuT;Parent=GCA000010485_03540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4558,COG:P,RefSeq:WP_001312167.1,SO:0001217,UniParc:UPI00000439E8,UniRef:UniRef100_A0A1X9VD20,UniRef:UniRef50_A8AJV0,UniRef:UniRef90_Q32AX9,VFDB:VFC0272,VFDB:VFG000918
contig_1	Pyrodigal	gene	3605604	3606863	.	+	.	ID=GCA000010485_03541_gene;locus_tag=GCA000010485_03541;gene=chuW
contig_1	Pyrodigal	CDS	3605604	3606863	.	+	0	ID=GCA000010485_03541;Name=Putative oxygen independent coproporphyrinogen III oxidase;locus_tag=GCA000010485_03541;product=Putative oxygen independent coproporphyrinogen III oxidase;Dbxref=GO:0003824,GO:0005737,GO:0006779,GO:0008168,GO:0032259,GO:0046872,GO:0051536,GO:0051539;gene=chuW;Parent=GCA000010485_03541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21936,SO:0001217,UniRef:UniRef50_A0A384LP51,UniRef:UniRef90_A0A384LP51,VFDB:VFC0272,VFDB:VFG000919;ec_number=2.1.1.342
contig_1	Pyrodigal	gene	3606876	3607370	.	+	.	ID=GCA000010485_03542_gene;locus_tag=GCA000010485_03542;gene=chuX
contig_1	Pyrodigal	CDS	3606876	3607370	.	+	0	ID=GCA000010485_03542;Name=putative heme-binding protein ChuX;locus_tag=GCA000010485_03542;product=putative heme-binding protein ChuX;gene=chuX;Parent=GCA000010485_03542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3721,COG:P,RefSeq:WP_000020034.1,SO:0001217,UniParc:UPI00000439EA,UniRef:UniRef100_A0A061K650,UniRef:UniRef50_Q32AY0,UniRef:UniRef90_Q32AY0,VFDB:VFC0272,VFDB:VFG000920
contig_1	Pyrodigal	gene	3607370	3607993	.	+	.	ID=GCA000010485_03543_gene;locus_tag=GCA000010485_03543;gene=chuY
contig_1	Pyrodigal	CDS	3607370	3607993	.	+	0	ID=GCA000010485_03543;Name=ChuY;locus_tag=GCA000010485_03543;product=ChuY;gene=chuY;Parent=GCA000010485_03543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000189351.1,SO:0001217,UniParc:UPI00018878CC,UniRef:UniRef100_A0A8S0FDZ1,UniRef:UniRef50_A0A0H3FNC3,UniRef:UniRef90_A0A8S0FDZ1,VFDB:VFC0272,VFDB:VFG000921
contig_1	Pyrodigal	gene	3608078	3609034	.	+	.	ID=GCA000010485_03544_gene;locus_tag=GCA000010485_03544;gene=shuU
contig_1	Pyrodigal	CDS	3608078	3609034	.	+	0	ID=GCA000010485_03544;Name=heme ABC transporter permease ShuU/ChuU;locus_tag=GCA000010485_03544;product=heme ABC transporter permease ShuU/ChuU;gene=shuU;Parent=GCA000010485_03544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000910402,COG:COG0609,COG:P,SO:0001217,UniParc:UPI00000439EC,UniRef:UniRef100_A0AAF0NJP9,UniRef:UniRef50_A0A8S0FHI1,UniRef:UniRef90_A0A7U9H5L5
contig_1	Pyrodigal	gene	3609031	3609801	.	+	.	ID=GCA000010485_03545_gene;locus_tag=GCA000010485_03545;gene=chuV
contig_1	Pyrodigal	CDS	3609031	3609801	.	+	0	ID=GCA000010485_03545;Name=ATP-binding hydrophilic protein ChuV;locus_tag=GCA000010485_03545;product=ATP-binding hydrophilic protein ChuV;Dbxref=GO:0005524,GO:0005886,GO:0016887;gene=chuV;Parent=GCA000010485_03545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000622316.1,SO:0001217,UniParc:UPI00000439ED,UniRef:UniRef100_Q8FCJ1,UniRef:UniRef50_Q8FCJ1,UniRef:UniRef90_Q8FCJ1,VFDB:VFC0272,VFDB:VFG044172;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3609853	3610428	.	-	.	ID=GCA000010485_03546_gene;locus_tag=GCA000010485_03546;gene=yhiD
contig_1	Pyrodigal	CDS	3609853	3610428	.	-	0	ID=GCA000010485_03546;Name=MgtC/SapB family protein;locus_tag=GCA000010485_03546;product=MgtC/SapB family protein;Dbxref=GO:0005886;gene=yhiD;Parent=GCA000010485_03546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07507,SO:0001217,UniParc:UPI00005EF4DB,UniRef:UniRef100_A0A023KPY2,UniRef:UniRef50_P0AFV3,UniRef:UniRef90_P0AFV3
contig_1	Pyrodigal	gene	3610564	3610902	.	-	.	ID=GCA000010485_03547_gene;locus_tag=GCA000010485_03547;gene=hdeB
contig_1	Pyrodigal	CDS	3610564	3610902	.	-	0	ID=GCA000010485_03547;Name=acid-activated periplasmic chaperone HdeB;locus_tag=GCA000010485_03547;product=acid-activated periplasmic chaperone HdeB;Dbxref=GO:0042597,GO:0051082,GO:1990451;gene=hdeB;Parent=GCA000010485_03547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001298717,KEGG:K19778,RefSeq:WP_000540805.1,SO:0001217,UniParc:UPI0000163A2A,UniRef:UniRef100_P0AET2,UniRef:UniRef50_P0AET2,UniRef:UniRef90_P0AET2
contig_1	Pyrodigal	gene	3611006	3611338	.	-	.	ID=GCA000010485_03548_gene;locus_tag=GCA000010485_03548;gene=hdeA
contig_1	Pyrodigal	CDS	3611006	3611338	.	-	0	ID=GCA000010485_03548;Name=acid-activated periplasmic chaperone HdeA;locus_tag=GCA000010485_03548;product=acid-activated periplasmic chaperone HdeA;Dbxref=GO:0030288,GO:1990451;gene=hdeA;Parent=GCA000010485_03548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000756550,KEGG:K19777,RefSeq:WP_000756548.1,SO:0001217,UniParc:UPI00000E4A8F,UniRef:UniRef100_D3Y2Z3,UniRef:UniRef50_P0AES9,UniRef:UniRef90_P0AES9
contig_1	Pyrodigal	gene	3611593	3612165	.	+	.	ID=GCA000010485_03549_gene;locus_tag=GCA000010485_03549;gene=hdeD
contig_1	Pyrodigal	CDS	3611593	3612165	.	+	0	ID=GCA000010485_03549;Name=acid-resistance protein HdeD;locus_tag=GCA000010485_03549;product=acid-resistance protein HdeD;Dbxref=GO:0005886;gene=hdeD;Parent=GCA000010485_03549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000965672,COG:COG3247,COG:R,RefSeq:WP_000965671.1,SO:0001217,UniParc:UPI00000DF1C8,UniRef:UniRef100_E2QGL8,UniRef:UniRef50_P0AET5,UniRef:UniRef90_P0AET5
contig_1	Pyrodigal	gene	3612964	3613491	.	+	.	ID=GCA000010485_03550_gene;locus_tag=GCA000010485_03550;gene=gadE
contig_1	Pyrodigal	CDS	3612964	3613491	.	+	0	ID=GCA000010485_03550;Name=acid resistance transcriptional activator GadE;locus_tag=GCA000010485_03550;product=acid resistance transcriptional activator GadE;Dbxref=GO:0003677,GO:0006355;gene=gadE;Parent=GCA000010485_03550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000576681,BlastRules:WP_000576682,KEGG:K21907,RefSeq:WP_000576690.1,SO:0001217,UniParc:UPI000013B269,UniRef:UniRef100_P63204,UniRef:UniRef50_P63204,UniRef:UniRef90_P63204
contig_1	Pyrodigal	gene	3613441	3613770	.	-	.	ID=GCA000010485_03551_gene;locus_tag=GCA000010485_03551
contig_1	Pyrodigal	CDS	3613441	3613770	.	-	0	ID=GCA000010485_03551;Name=hypothetical protein;locus_tag=GCA000010485_03551;product=hypothetical protein;Parent=GCA000010485_03551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001205317.1,SO:0001217,UniParc:UPI0001DBCCDB,UniRef:UniRef100_A0A0A2RL47,UniRef:UniRef50_A0A2S8JRI1,UniRef:UniRef90_A0A232PDF7
contig_1	Infernal	gene	3613609	3613680	.	+	.	ID=GCA000010485_03552_gene;locus_tag=GCA000010485_03552;gene=ES205
contig_1	Infernal	ncRNA	3613609	3613680	6.2e-18	+	.	ID=GCA000010485_03552;Name=ES205 sRNA;locus_tag=GCA000010485_03552;product=ES205 sRNA;Dbxref=RFAM:RF02754;Parent=GCA000010485_03552_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02754
contig_1	Pyrodigal	gene	3613830	3614987	.	+	.	ID=GCA000010485_03553_gene;locus_tag=GCA000010485_03553;gene=mdtE
contig_1	Pyrodigal	CDS	3613830	3614987	.	+	0	ID=GCA000010485_03553;Name=multidrug transporter subunit MdtE;locus_tag=GCA000010485_03553;product=multidrug transporter subunit MdtE;Dbxref=GO:0005886,GO:0009636,GO:0015721,GO:0022857,GO:0046677;gene=mdtE;Parent=GCA000010485_03553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18898,SO:0001217,UniParc:UPI00000E4A90,UniRef:UniRef100_Q8CVL1,UniRef:UniRef50_P37636,UniRef:UniRef90_P37636
contig_1	Pyrodigal	gene	3615012	3618125	.	+	.	ID=GCA000010485_03554_gene;locus_tag=GCA000010485_03554;gene=mdtF
contig_1	Pyrodigal	CDS	3615012	3618125	.	+	0	ID=GCA000010485_03554;Name=multidrug efflux pump RND permease MdtF;locus_tag=GCA000010485_03554;product=multidrug efflux pump RND permease MdtF;Dbxref=GO:0005886,GO:0006855,GO:0009636,GO:0015125,GO:0015562,GO:0015721,GO:0016020,GO:0042802,GO:0042908,GO:0042910,GO:0046677;gene=mdtF;Parent=GCA000010485_03554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000024872,COG:COG0841,COG:V,KEGG:K18899,RefSeq:WP_000024849.1,SO:0001217,UniParc:UPI0001C22C77,UniRef:UniRef100_A0A3L4BLE3,UniRef:UniRef50_P37637,UniRef:UniRef90_P37637
contig_1	Pyrodigal	gene	3618488	3619216	.	-	.	ID=GCA000010485_03555_gene;locus_tag=GCA000010485_03555;gene=gadW
contig_1	Pyrodigal	CDS	3618488	3619216	.	-	0	ID=GCA000010485_03555;Name=acid resistance transcriptional activator GadW;locus_tag=GCA000010485_03555;product=acid resistance transcriptional activator GadW;Dbxref=GO:0000976,GO:0003700,GO:0005829;gene=gadW;Parent=GCA000010485_03555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000149999,BlastRules:WP_000951549,KEGG:K21906,RefSeq:WP_000951553.1,SO:0001217,UniParc:UPI00000DF1CA,UniRef:UniRef100_Q8FCI7,UniRef:UniRef50_P63201,UniRef:UniRef90_Q8FCI7
contig_1	Infernal	gene	3619460	3619573	.	+	.	ID=GCA000010485_03556_gene;locus_tag=GCA000010485_03556;gene=gadY
contig_1	Infernal	ncRNA	3619460	3619573	1.3e-25	+	.	ID=GCA000010485_03556;Name=GadY;locus_tag=GCA000010485_03556;gene=gadY;product=GadY;Dbxref=RFAM:RF00122;Parent=GCA000010485_03556_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00122
contig_1	Pyrodigal	gene	3619585	3620409	.	-	.	ID=GCA000010485_03557_gene;locus_tag=GCA000010485_03557;gene=gadX
contig_1	Pyrodigal	CDS	3619585	3620409	.	-	0	ID=GCA000010485_03557;Name=acid resistance transcriptional activator GadX;locus_tag=GCA000010485_03557;product=acid resistance transcriptional activator GadX;Dbxref=GO:0000976,GO:0003700,GO:0005829;gene=gadX;Parent=GCA000010485_03557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001182738,BlastRules:WP_001191059,BlastRules:WP_001191074,COG:COG2207,COG:K,KEGG:K21905,RefSeq:WP_001182741.1,SO:0001217,UniParc:UPI0001C22C78,UniRef:UniRef100_A0A7I0KWY0,UniRef:UniRef50_P37639,UniRef:UniRef90_P37639
contig_1	Pyrodigal	gene	3620779	3622179	.	-	.	ID=GCA000010485_03558_gene;locus_tag=GCA000010485_03558;gene=gadB
contig_1	Pyrodigal	CDS	3620779	3622179	.	-	0	ID=GCA000010485_03558;Name=glutamate decarboxylase;locus_tag=GCA000010485_03558;product=glutamate decarboxylase;Dbxref=GO:0004351,GO:0005829,GO:0006538,GO:0006540,GO:0030170;gene=gadB;Parent=GCA000010485_03558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0076,COG:E,RefSeq:WP_000372240.1,SO:0001217,UniParc:UPI0000128FA5,UniRef:UniRef100_P69908,UniRef:UniRef50_P69910,UniRef:UniRef90_P69910;ec_number=4.1.1.15
contig_1	Pyrodigal	gene	3622390	3623787	.	-	.	ID=GCA000010485_03559_gene;locus_tag=GCA000010485_03559;gene=ccp
contig_1	Pyrodigal	CDS	3622390	3623787	.	-	0	ID=GCA000010485_03559;Name=cytochrome c peroxidase;locus_tag=GCA000010485_03559;product=cytochrome c peroxidase;Dbxref=GO:0004130,GO:0009055,GO:0019645,GO:0020037,GO:0042542,GO:0042743,GO:0046872;gene=ccp;Parent=GCA000010485_03559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000784827,KEGG:K00428,RefSeq:WP_000784836.1,SO:0001217,UniParc:UPI0001C22C79,UniRef:UniRef100_A0A066T264,UniRef:UniRef50_P37197,UniRef:UniRef90_P37197;ec_number=1.11.1.5
contig_1	Pyrodigal	gene	3624192	3625841	.	+	.	ID=GCA000010485_03560_gene;locus_tag=GCA000010485_03560;gene=treF
contig_1	Pyrodigal	CDS	3624192	3625841	.	+	0	ID=GCA000010485_03560;Name=Cytoplasmic trehalase;locus_tag=GCA000010485_03560;product=Cytoplasmic trehalase;Dbxref=GO:0004555,GO:0005737,GO:0005993,GO:0071474;gene=treF;Parent=GCA000010485_03560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000934214.1,SO:0001217,UniParc:UPI00000DF1CD,UniRef:UniRef100_B7UL72,UniRef:UniRef50_P62601,UniRef:UniRef90_P62601;ec_number=3.2.1.28
contig_1	Pyrodigal	gene	3625892	3626494	.	-	.	ID=GCA000010485_03561_gene;locus_tag=GCA000010485_03561;gene=yhjB
contig_1	Pyrodigal	CDS	3625892	3626494	.	-	0	ID=GCA000010485_03561;Name=Putative HTH-type transcriptional regulator YhjB;locus_tag=GCA000010485_03561;product=Putative HTH-type transcriptional regulator YhjB;Dbxref=GO:0003677,GO:0006355;gene=yhjB;Parent=GCA000010485_03561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001167663.1,SO:0001217,UniParc:UPI00000DF1CE,UniRef:UniRef100_E2QGM7,UniRef:UniRef50_P37640,UniRef:UniRef90_P37640
contig_1	Pyrodigal	gene	3626942	3627913	.	+	.	ID=GCA000010485_03562_gene;locus_tag=GCA000010485_03562;gene=lysR
contig_1	Pyrodigal	CDS	3626942	3627913	.	+	0	ID=GCA000010485_03562;Name=D-malate degradation protein R;locus_tag=GCA000010485_03562;product=D-malate degradation protein R;gene=lysR;Parent=GCA000010485_03562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K18900,SO:0001217,UniParc:UPI0001C22C7A,UniRef:UniRef100_A0A061KA79,UniRef:UniRef50_P37641,UniRef:UniRef90_J7RAE4
contig_1	Pyrodigal	gene	3627961	3628974	.	+	.	ID=GCA000010485_03563_gene;locus_tag=GCA000010485_03563;gene=yhjD
contig_1	Pyrodigal	CDS	3627961	3628974	.	+	0	ID=GCA000010485_03563;Name=inner membrane protein YhjD;locus_tag=GCA000010485_03563;product=inner membrane protein YhjD;Dbxref=GO:0005886,GO:0015920;gene=yhjD;Parent=GCA000010485_03563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_000191263.1,SO:0001217,UniParc:UPI0001C22C7B,UniRef:UniRef100_A0A061K9T7,UniRef:UniRef50_P37642,UniRef:UniRef90_P37642
contig_1	Pyrodigal	gene	3629367	3630689	.	+	.	ID=GCA000010485_03564_gene;locus_tag=GCA000010485_03564;gene=yhjE
contig_1	Pyrodigal	CDS	3629367	3630689	.	+	0	ID=GCA000010485_03564;Name=Inner membrane metabolite transport protein YhjE;locus_tag=GCA000010485_03564;product=Inner membrane metabolite transport protein YhjE;Dbxref=GO:0005886,GO:0022857;gene=yhjE;Parent=GCA000010485_03564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001149010.1,SO:0001217,UniParc:UPI0001C22C7C,UniRef:UniRef100_A0A061YDM5,UniRef:UniRef50_P37643,UniRef:UniRef90_P37643
contig_1	Pyrodigal	gene	3630868	3632928	.	-	.	ID=GCA000010485_03565_gene;locus_tag=GCA000010485_03565;gene=yhjG
contig_1	Pyrodigal	CDS	3630868	3632928	.	-	0	ID=GCA000010485_03565;Name=AsmA family protein YhjG;locus_tag=GCA000010485_03565;product=AsmA family protein YhjG;Dbxref=GO:0005886,GO:0090313;gene=yhjG;Parent=GCA000010485_03565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2982,COG:M,RefSeq:WP_001296505.1,SO:0001217,UniParc:UPI00021857D6,UniRef:UniRef100_A0A066T659,UniRef:UniRef50_P37645,UniRef:UniRef90_P37645
contig_1	Pyrodigal	gene	3632998	3633765	.	-	.	ID=GCA000010485_03566_gene;locus_tag=GCA000010485_03566;gene=pdeH
contig_1	Pyrodigal	CDS	3632998	3633765	.	-	0	ID=GCA000010485_03566;Name=cyclic-guanylate-specific phosphodiesterase;locus_tag=GCA000010485_03566;product=cyclic-guanylate-specific phosphodiesterase;Dbxref=GO:0000166,GO:0071111,GO:1902021;gene=pdeH;Parent=GCA000010485_03566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2200,COG:T,KEGG:K21086,RefSeq:WP_001296506.1,SO:0001217,UniParc:UPI0001C22C7E,UniRef:UniRef100_A0A061Y7B9,UniRef:UniRef50_P37646,UniRef:UniRef90_P37646;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	3633997	3634926	.	+	.	ID=GCA000010485_03567_gene;locus_tag=GCA000010485_03567;gene=kdgK
contig_1	Pyrodigal	CDS	3633997	3634926	.	+	0	ID=GCA000010485_03567;Name=2-dehydro-3-deoxygluconokinase;locus_tag=GCA000010485_03567;product=2-dehydro-3-deoxygluconokinase;Dbxref=GO:0005524,GO:0005829,GO:0006974,GO:0008673,GO:0019698,GO:0042840;gene=kdgK;Parent=GCA000010485_03567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000037562,BlastRules:WP_011229211,BlastRules:WP_013315827,RefSeq:WP_001296507.1,SO:0001217,UniParc:UPI00021857D8,UniRef:UniRef100_A0A066T273,UniRef:UniRef50_P37647,UniRef:UniRef90_P37647;ec_number=2.7.1.45
contig_1	Pyrodigal	gene	3635022	3636518	.	-	.	ID=GCA000010485_03568_gene;locus_tag=GCA000010485_03568;gene=yhjJ
contig_1	Pyrodigal	CDS	3635022	3636518	.	-	0	ID=GCA000010485_03568;Name=Protein YhjJ;locus_tag=GCA000010485_03568;product=Protein YhjJ;Dbxref=GO:0006508,GO:0008237,GO:0042542,GO:0042597,GO:0046872;gene=yhjJ;Parent=GCA000010485_03568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_001163135.1,SO:0001217,UniParc:UPI00005E41A2,UniRef:UniRef100_A0A061YES2,UniRef:UniRef50_P37648,UniRef:UniRef90_P37648
contig_1	Pyrodigal	gene	3636738	3638024	.	-	.	ID=GCA000010485_03569_gene;locus_tag=GCA000010485_03569;gene=dctC
contig_1	Pyrodigal	CDS	3636738	3638024	.	-	0	ID=GCA000010485_03569;Name=C4-dicarboxylate transporter DctC;locus_tag=GCA000010485_03569;product=C4-dicarboxylate transporter DctC;Dbxref=GO:0005886,GO:0015138,GO:0015141,GO:0015366,GO:0070778;gene=dctC;Parent=GCA000010485_03569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000858214,BlastRules:WP_003082442,COG:C,COG:COG1301,KEGG:K11103,RefSeq:WP_000858214.1,SO:0001217,UniParc:UPI000003EB2B,UniRef:UniRef100_P0A830,UniRef:UniRef50_P0A830,UniRef:UniRef90_P0A830
contig_1	Pyrodigal	gene	3638207	3640156	.	-	.	ID=GCA000010485_03570_gene;locus_tag=GCA000010485_03570;gene=hmsP
contig_1	Pyrodigal	CDS	3638207	3640156	.	-	0	ID=GCA000010485_03570;Name=biofilm formation regulator HmsP;locus_tag=GCA000010485_03570;product=biofilm formation regulator HmsP;Dbxref=GO:0005886,GO:0007165,GO:0042802,GO:0071111;gene=hmsP;Parent=GCA000010485_03570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2200,COG:T,KEGG:K26149,SO:0001217,UniParc:UPI0002185657,UniRef:UniRef100_A0A1U9TVA8,UniRef:UniRef50_P37649,UniRef:UniRef90_P37649;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	3640277	3643750	.	-	.	ID=GCA000010485_03571_gene;locus_tag=GCA000010485_03571;gene=bcsC
contig_1	Pyrodigal	CDS	3640277	3643750	.	-	0	ID=GCA000010485_03571;Name=cellulose synthase complex outer membrane protein BcsC;locus_tag=GCA000010485_03571;product=cellulose synthase complex outer membrane protein BcsC;Dbxref=GO:0005515,GO:0009279,GO:0019867,GO:0030244;gene=bcsC;Parent=GCA000010485_03571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20543,RefSeq:WP_001225072.1,SO:0001217,UniParc:UPI0001C22C81,UniRef:UniRef100_A0A061KCQ7,UniRef:UniRef50_P37650,UniRef:UniRef90_P37650
contig_1	Pyrodigal	gene	3643732	3644838	.	-	.	ID=GCA000010485_03572_gene;locus_tag=GCA000010485_03572;gene=bcsZ
contig_1	Pyrodigal	CDS	3643732	3644838	.	-	0	ID=GCA000010485_03572;Name=cellulose synthase complex periplasmic endoglucanase BcsZ;locus_tag=GCA000010485_03572;product=cellulose synthase complex periplasmic endoglucanase BcsZ;Dbxref=GO:0004553,GO:0005576,GO:0005975,GO:0008810,GO:0030245;gene=bcsZ;Parent=GCA000010485_03572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001312172.1,SO:0001217,UniParc:UPI0001C22C82,UniRef:UniRef100_A0A061KA72,UniRef:UniRef50_P37651,UniRef:UniRef90_P37651;ec_number=3.2.1.4
contig_1	Pyrodigal	gene	3644845	3647154	.	-	.	ID=GCA000010485_03573_gene;locus_tag=GCA000010485_03573;gene=bcsB
contig_1	Pyrodigal	CDS	3644845	3647154	.	-	0	ID=GCA000010485_03573;Name=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;locus_tag=GCA000010485_03573;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;Dbxref=GO:0005886,GO:0006011,GO:0030244;gene=bcsB;Parent=GCA000010485_03573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00028CA6F9,UniRef:UniRef100_A0A0J2DGA6,UniRef:UniRef50_P37652,UniRef:UniRef90_P37652
contig_1	Pyrodigal	gene	3647195	3649813	.	-	.	ID=GCA000010485_03574_gene;locus_tag=GCA000010485_03574;gene=bcsA
contig_1	Pyrodigal	CDS	3647195	3649813	.	-	0	ID=GCA000010485_03574;Name=UDP-forming cellulose synthase catalytic subunit;locus_tag=GCA000010485_03574;product=UDP-forming cellulose synthase catalytic subunit;Dbxref=GO:0005886,GO:0006011,GO:0016020,GO:0016758,GO:0016760,GO:0030244,GO:0035438,GO:0090540;gene=bcsA;Parent=GCA000010485_03574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,KEGG:K00694,RefSeq:WP_000025903.1,SO:0001217,UniParc:UPI0001C22C83,UniRef:UniRef100_A0A061KEE2,UniRef:UniRef50_P37653,UniRef:UniRef90_P37653;ec_number=2.4.1.12
contig_1	Pyrodigal	gene	3649810	3650562	.	-	.	ID=GCA000010485_03575_gene;locus_tag=GCA000010485_03575;gene=bcsQ
contig_1	Pyrodigal	CDS	3649810	3650562	.	-	0	ID=GCA000010485_03575;Name=cellulose biosynthesis protein BcsQ;locus_tag=GCA000010485_03575;product=cellulose biosynthesis protein BcsQ;Dbxref=GO:0005524,GO:0005737;gene=bcsQ;Parent=GCA000010485_03575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000279551.1,SO:0001217,UniParc:UPI0001C22C84,UniRef:UniRef100_A0A061KEU2,UniRef:UniRef50_P0DP92,UniRef:UniRef90_P0DP92
contig_1	Pyrodigal	gene	3650574	3650762	.	-	.	ID=GCA000010485_03576_gene;locus_tag=GCA000010485_03576;gene=bcsR
contig_1	Pyrodigal	CDS	3650574	3650762	.	-	0	ID=GCA000010485_03576;Name=cellulose biosynthesis protein BcsR;locus_tag=GCA000010485_03576;product=cellulose biosynthesis protein BcsR;gene=bcsR;Parent=GCA000010485_03576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001063314.1,SO:0001217,UniParc:UPI00000DF1D9,UniRef:UniRef100_C3SNG7,UniRef:UniRef50_A0A090V6H8,UniRef:UniRef90_C3SNG7
contig_1	Pyrodigal	gene	3651047	3652606	.	+	.	ID=GCA000010485_03577_gene;locus_tag=GCA000010485_03577;gene=bcsE
contig_1	Pyrodigal	CDS	3651047	3652606	.	+	0	ID=GCA000010485_03577;Name=cellulose biosynthesis c-di-GMP-binding protein BcsE;locus_tag=GCA000010485_03577;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;Dbxref=GO:0030244,GO:0035438;gene=bcsE;Parent=GCA000010485_03577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296511.1,SO:0001217,UniParc:UPI000209A832,UniRef:UniRef100_UPI000209A832,UniRef:UniRef50_P37657,UniRef:UniRef90_P37657
contig_1	Pyrodigal	gene	3652603	3652794	.	+	.	ID=GCA000010485_03578_gene;locus_tag=GCA000010485_03578;gene=bcsF
contig_1	Pyrodigal	CDS	3652603	3652794	.	+	0	ID=GCA000010485_03578;Name=cellulose biosynthesis protein BcsF;locus_tag=GCA000010485_03578;product=cellulose biosynthesis protein BcsF;Dbxref=GO:0005886,GO:0030244,GO:0052324;gene=bcsF;Parent=GCA000010485_03578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000988308.1,SO:0001217,UniParc:UPI0000167DEC,UniRef:UniRef100_P0ADJ5,UniRef:UniRef50_P0ADJ5,UniRef:UniRef90_P0ADJ5
contig_1	Pyrodigal	gene	3652791	3654470	.	+	.	ID=GCA000010485_03579_gene;locus_tag=GCA000010485_03579;gene=bcsG
contig_1	Pyrodigal	CDS	3652791	3654470	.	+	0	ID=GCA000010485_03579;Name=cellulose biosynthesis protein BcsG;locus_tag=GCA000010485_03579;product=cellulose biosynthesis protein BcsG;Dbxref=GO:0005886,GO:0030244;gene=bcsG;Parent=GCA000010485_03579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000191554.1,SO:0001217,UniParc:UPI0001C22D2A,UniRef:UniRef100_UPI0001C22D2A,UniRef:UniRef50_P37659,UniRef:UniRef90_P37659;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	3654556	3654663	.	-	.	ID=GCA000010485_03580_gene;locus_tag=GCA000010485_03580;gene=ldrD
contig_1	Pyrodigal	CDS	3654556	3654663	.	-	0	ID=GCA000010485_03580;Name=Small toxic polypeptide LdrD;locus_tag=GCA000010485_03580;product=Small toxic polypeptide LdrD;Dbxref=GO:0005886;gene=ldrD;Parent=GCA000010485_03580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18862,RefSeq:WP_001295224.1,SO:0001217,UniParc:UPI00016DBCF3,UniRef:UniRef100_A0A1Y2ZR08,UniRef:UniRef50_Q6BF25,UniRef:UniRef90_Q6BF25
contig_1	Infernal	gene	3654712	3654777	.	+	.	ID=GCA000010485_03581_gene;locus_tag=GCA000010485_03581;gene=rdlD
contig_1	Infernal	ncRNA	3654712	3654777	1.2e-17	+	.	ID=GCA000010485_03581;Name=rdlD antitoxin;locus_tag=GCA000010485_03581;gene=rdlD;product=rdlD antitoxin;Dbxref=RFAM:RF01813;Parent=GCA000010485_03581_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01813
contig_1	Pyrodigal	gene	3655039	3655146	.	-	.	ID=GCA000010485_03582_gene;locus_tag=GCA000010485_03582
contig_1	Pyrodigal	CDS	3655039	3655146	.	-	0	ID=GCA000010485_03582;Name=Type I toxin-antitoxin system toxin Ldr family protein;locus_tag=GCA000010485_03582;product=Type I toxin-antitoxin system toxin Ldr family protein;Parent=GCA000010485_03582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18862,RefSeq:WP_000170748.1,SO:0001217,UniParc:UPI0002610FCC,UniRef:UniRef100_A0A3K0NFU8,UniRef:UniRef50_A0A234WDZ3,UniRef:UniRef90_A0A3K0NFU8
contig_1	Infernal	gene	3655195	3655260	.	+	.	ID=GCA000010485_03583_gene;locus_tag=GCA000010485_03583;gene=rdlD
contig_1	Infernal	ncRNA	3655195	3655260	3.9e-18	+	.	ID=GCA000010485_03583;Name=rdlD antitoxin;locus_tag=GCA000010485_03583;gene=rdlD;product=rdlD antitoxin;Dbxref=RFAM:RF01813;Parent=GCA000010485_03583_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01813
contig_1	Pyrodigal	gene	3655522	3655629	.	-	.	ID=GCA000010485_03584_gene;locus_tag=GCA000010485_03584;gene=ldrD
contig_1	Pyrodigal	CDS	3655522	3655629	.	-	0	ID=GCA000010485_03584;Name=Small toxic polypeptide LdrD;locus_tag=GCA000010485_03584;product=Small toxic polypeptide LdrD;Dbxref=GO:0005886;gene=ldrD;Parent=GCA000010485_03584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18862,RefSeq:WP_001295224.1,SO:0001217,UniParc:UPI00016DBCF3,UniRef:UniRef100_A0A1Y2ZR08,UniRef:UniRef50_Q6BF25,UniRef:UniRef90_Q6BF25
contig_1	Infernal	gene	3655678	3655743	.	+	.	ID=GCA000010485_03585_gene;locus_tag=GCA000010485_03585;gene=rdlD
contig_1	Infernal	ncRNA	3655678	3655743	7.5e-17	+	.	ID=GCA000010485_03585;Name=rdlD antitoxin;locus_tag=GCA000010485_03585;gene=rdlD;product=rdlD antitoxin;Dbxref=RFAM:RF01813;Parent=GCA000010485_03585_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01813
contig_1	Pyrodigal	gene	3656105	3657376	.	+	.	ID=GCA000010485_03586_gene;locus_tag=GCA000010485_03586;gene=yhjV
contig_1	Pyrodigal	CDS	3656105	3657376	.	+	0	ID=GCA000010485_03586;Name=Inner membrane transport protein YhjV;locus_tag=GCA000010485_03586;product=Inner membrane transport protein YhjV;Dbxref=GO:0003333,GO:0005886,GO:0009314;gene=yhjV;Parent=GCA000010485_03586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,RefSeq:WP_001545666.1,SO:0001217,UniParc:UPI0001C22D2E,UniRef:UniRef100_A0A7I0KWZ6,UniRef:UniRef50_P37660,UniRef:UniRef90_P37660
contig_1	Pyrodigal	gene	3657393	3658400	.	-	.	ID=GCA000010485_03587_gene;locus_tag=GCA000010485_03587;gene=hipA
contig_1	Pyrodigal	CDS	3657393	3658400	.	-	0	ID=GCA000010485_03587;Name=HipA domain-containing protein;locus_tag=GCA000010485_03587;product=HipA domain-containing protein;gene=hipA;Parent=GCA000010485_03587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07154,RefSeq:WP_001262467.1,SO:0001217,UniParc:UPI0001E8C503,UniRef:UniRef100_A0A3K2ZTB5,UniRef:UniRef50_P44033,UniRef:UniRef90_A0A5F1F7P7;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	3658400	3658711	.	-	.	ID=GCA000010485_03588_gene;locus_tag=GCA000010485_03588;gene=hipA
contig_1	Pyrodigal	CDS	3658400	3658711	.	-	0	ID=GCA000010485_03588;Name=Type II toxin-antitoxin system HipA family toxin;locus_tag=GCA000010485_03588;product=Type II toxin-antitoxin system HipA family toxin;gene=hipA;Parent=GCA000010485_03588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07154,RefSeq:WP_001312177.1,SO:0001217,UniParc:UPI0001C22D30,UniRef:UniRef100_A0A3L3HKE2,UniRef:UniRef50_A0A094JGD7,UniRef:UniRef90_A0A5F1F6R4;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	3658696	3659019	.	-	.	ID=GCA000010485_03589_gene;locus_tag=GCA000010485_03589
contig_1	Pyrodigal	CDS	3658696	3659019	.	-	0	ID=GCA000010485_03589;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_03589;product=Helix-turn-helix domain-containing protein;Parent=GCA000010485_03589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000563102.1,SO:0001217,UniParc:UPI000187BF97,UniRef:UniRef100_A0A0K5GHB4,UniRef:UniRef50_A0AAP0VZV9,UniRef:UniRef90_A0A5F1F605
contig_1	Pyrodigal	gene	3659244	3660257	.	-	.	ID=GCA000010485_03590_gene;locus_tag=GCA000010485_03590;gene=dppF
contig_1	Pyrodigal	CDS	3659244	3660257	.	-	0	ID=GCA000010485_03590;Name=dipeptide ABC transporter ATP-binding subunit DppF;locus_tag=GCA000010485_03590;product=dipeptide ABC transporter ATP-binding subunit DppF;Dbxref=GO:0005524,GO:0009314,GO:0015031,GO:0015232,GO:0016020,GO:0016887,GO:0035351,GO:0042938,GO:0055052,GO:0071916;gene=dppF;Parent=GCA000010485_03590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000107012,COG:COG4608,COG:E,RefSeq:WP_000103572.1,SO:0001217,UniParc:UPI0001C22D31,UniRef:UniRef100_A0A7I0L6D8,UniRef:UniRef50_P37313,UniRef:UniRef90_P37313;ec_number=7.4.2.9
contig_1	Pyrodigal	gene	3660254	3661237	.	-	.	ID=GCA000010485_03591_gene;locus_tag=GCA000010485_03591;gene=dppD
contig_1	Pyrodigal	CDS	3660254	3661237	.	-	0	ID=GCA000010485_03591;Name=dipeptide ABC transporter ATP-binding protein;locus_tag=GCA000010485_03591;product=dipeptide ABC transporter ATP-binding protein;Dbxref=GO:0000166,GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=dppD;Parent=GCA000010485_03591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_001196477.1,SO:0001217,UniParc:UPI00000DF1E1,UniRef:UniRef100_E2QGP9,UniRef:UniRef50_P0AAG0,UniRef:UniRef90_P0AAG0;ec_number=7.4.2.9
contig_1	Pyrodigal	gene	3661248	3662150	.	-	.	ID=GCA000010485_03592_gene;locus_tag=GCA000010485_03592;gene=dppC
contig_1	Pyrodigal	CDS	3661248	3662150	.	-	0	ID=GCA000010485_03592;Name=dipeptide ABC transporter permease DppC;locus_tag=GCA000010485_03592;product=dipeptide ABC transporter permease DppC;Dbxref=GO:0005886,GO:0015031,GO:0016020,GO:0035351,GO:0042938,GO:0055052,GO:0055085,GO:0071916;gene=dppC;Parent=GCA000010485_03592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,KEGG:K12370,RefSeq:WP_000084677.1,SO:0001217,UniParc:UPI000012984A,UniRef:UniRef100_P0AEG1,UniRef:UniRef50_P0AEG1,UniRef:UniRef90_P0AEG1;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	3662160	3663179	.	-	.	ID=GCA000010485_03593_gene;locus_tag=GCA000010485_03593;gene=dppB
contig_1	Pyrodigal	CDS	3662160	3663179	.	-	0	ID=GCA000010485_03593;Name=dipeptide ABC transporter permease DppB;locus_tag=GCA000010485_03593;product=dipeptide ABC transporter permease DppB;Dbxref=GO:0005886,GO:0015031,GO:0016020,GO:0035351,GO:0042938,GO:0055052,GO:0071916;gene=dppB;Parent=GCA000010485_03593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,KEGG:K12369,RefSeq:WP_000938855.1,SO:0001217,UniParc:UPI0000129847,UniRef:UniRef100_P0AEF8,UniRef:UniRef50_P0AEF8,UniRef:UniRef90_P0AEF8;ec_number=7.4.2.-
contig_1	Infernal	gene	3663386	3663428	.	+	.	ID=GCA000010485_03594_gene;locus_tag=GCA000010485_03594;gene=ES036
contig_1	Infernal	ncRNA	3663386	3663428	3.4e-06	+	.	ID=GCA000010485_03594;Name=ES036 (CssrF) sRNA;locus_tag=GCA000010485_03594;product=ES036 (CssrF) sRNA;Dbxref=RFAM:RF02751;Parent=GCA000010485_03594_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02751
contig_1	Pyrodigal	gene	3663486	3665093	.	-	.	ID=GCA000010485_03595_gene;locus_tag=GCA000010485_03595;gene=dppA
contig_1	Pyrodigal	CDS	3663486	3665093	.	-	0	ID=GCA000010485_03595;Name=dipeptide ABC transporter substrate-binding protein DppA;locus_tag=GCA000010485_03595;product=dipeptide ABC transporter substrate-binding protein DppA;Dbxref=GO:0015031,GO:0015833,GO:0015886,GO:0016020,GO:0020037,GO:0030288,GO:0035351,GO:0042277,GO:0042938,GO:0050918,GO:0055052,GO:0061077,GO:0071916,GO:1904680;gene=dppA;Parent=GCA000010485_03595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001222883,COG:COG0747,COG:E,KEGG:K12368,RefSeq:WP_001222871.1,SO:0001217,UniParc:UPI00000E4A94,UniRef:UniRef100_E2QGQ2,UniRef:UniRef50_P23847,UniRef:UniRef90_P23847;ec_number=7.4.2.9
contig_1	Infernal	gene	3665663	3665743	.	+	.	ID=GCA000010485_03596_gene;locus_tag=GCA000010485_03596;gene=naRNA4
contig_1	Infernal	ncRNA	3665663	3665743	6.3e-10	+	.	ID=GCA000010485_03596;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_03596;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_03596_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	tRNAscan-SE	gene	3665837	3665913	.	-	.	ID=GCA000010485_03597_gene;locus_tag=GCA000010485_03597;gene=trnP
contig_1	tRNAscan-SE	tRNA	3665837	3665913	.	-	.	ID=GCA000010485_03597;Name=tRNA-Pro(cgg);locus_tag=GCA000010485_03597;product=tRNA-Pro(cgg);gene=trnP;anti_codon=cgg;amino_acid=Pro;Parent=GCA000010485_03597_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	Pyrodigal	gene	3666005	3667696	.	-	.	ID=GCA000010485_03598_gene;locus_tag=GCA000010485_03598;gene=eptB
contig_1	Pyrodigal	CDS	3666005	3667696	.	-	0	ID=GCA000010485_03598;Name=kdo(2)-lipid A phosphoethanolamine 7''-transferase;locus_tag=GCA000010485_03598;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;Dbxref=GO:0005886,GO:0008484,GO:0009244,GO:0009245,GO:0043838;gene=eptB;Parent=GCA000010485_03598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12975,RefSeq:WP_001269202.1,SO:0001217,UniParc:UPI00016088FC,UniRef:UniRef100_A0A061LN06,UniRef:UniRef50_P37661,UniRef:UniRef90_P37661;ec_number=2.7.8.42
contig_1	Pyrodigal	gene	3668020	3669228	.	-	.	ID=GCA000010485_03599_gene;locus_tag=GCA000010485_03599;gene=yhjX
contig_1	Pyrodigal	CDS	3668020	3669228	.	-	0	ID=GCA000010485_03599;Name=putative MFS-type transporter YhjX;locus_tag=GCA000010485_03599;product=putative MFS-type transporter YhjX;Dbxref=GO:0005886,GO:0022857,GO:0031669;gene=yhjX;Parent=GCA000010485_03599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2223,COG:P,RefSeq:WP_000189046.1,SO:0001217,UniParc:UPI00000DF1E7,UniRef:UniRef100_A0A061KES5,UniRef:UniRef50_P37662,UniRef:UniRef90_P37662
contig_1	Pyrodigal	gene	3669457	3670155	.	-	.	ID=GCA000010485_03600_gene;locus_tag=GCA000010485_03600;gene=yhjY
contig_1	Pyrodigal	CDS	3669457	3670155	.	-	0	ID=GCA000010485_03600;Name=putative protein YhjY;locus_tag=GCA000010485_03600;product=putative protein YhjY;Dbxref=GO:0019867;gene=yhjY;Parent=GCA000010485_03600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000584467.1,SO:0001217,UniParc:UPI0001C22D32,UniRef:UniRef100_A0A023KQK9,UniRef:UniRef50_P37663,UniRef:UniRef90_P37663
contig_1	Pyrodigal	gene	3670313	3670876	.	+	.	ID=GCA000010485_03601_gene;locus_tag=GCA000010485_03601;gene=tag
contig_1	Pyrodigal	CDS	3670313	3670876	.	+	0	ID=GCA000010485_03601;Name=DNA-3-methyladenine glycosylase I;locus_tag=GCA000010485_03601;product=DNA-3-methyladenine glycosylase I;Dbxref=GO:0006284,GO:0006307,GO:0008725,GO:0046872;gene=tag;Parent=GCA000010485_03601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01246,RefSeq:WP_000438947.1,SO:0001217,UniParc:UPI00016088FB,UniRef:UniRef100_A0A066T1Y9,UniRef:UniRef50_P05100,UniRef:UniRef90_P05100;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	3670873	3671313	.	+	.	ID=GCA000010485_03602_gene;locus_tag=GCA000010485_03602;gene=yiaC
contig_1	Pyrodigal	CDS	3670873	3671313	.	+	0	ID=GCA000010485_03602;Name=N-acetyltransferase;locus_tag=GCA000010485_03602;product=N-acetyltransferase;Dbxref=GO:0008080,GO:0061733;gene=yiaC;Parent=GCA000010485_03602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000617494.1,SO:0001217,UniParc:UPI0001C22D33,UniRef:UniRef100_A0A066T696,UniRef:UniRef50_P37664,UniRef:UniRef90_P37664;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	3671282	3673615	.	-	.	ID=GCA000010485_03603_gene;locus_tag=GCA000010485_03603;gene=bisC
contig_1	Pyrodigal	CDS	3671282	3673615	.	-	0	ID=GCA000010485_03603;Name=biotin sulfoxide reductase;locus_tag=GCA000010485_03603;product=biotin sulfoxide reductase;Dbxref=GO:0009055,GO:0009061,GO:0030151,GO:0030288,GO:0033744,GO:0043546;gene=bisC;Parent=GCA000010485_03603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000013950,COG:C,COG:COG0243,KEGG:K08351,RefSeq:WP_000013978.1,SO:0001217,UniParc:UPI0002F5BD41,UniRef:UniRef100_UPI0002F5BD41,UniRef:UniRef50_P20099,UniRef:UniRef90_P20099;ec_number=1.8.4.13
contig_1	Pyrodigal	gene	3673768	3674427	.	+	.	ID=GCA000010485_03604_gene;locus_tag=GCA000010485_03604;gene=yiaD
contig_1	Pyrodigal	CDS	3673768	3674427	.	+	0	ID=GCA000010485_03604;Name=OmpA family lipoprotein;locus_tag=GCA000010485_03604;product=OmpA family lipoprotein;Dbxref=GO:0005886,GO:0009279;gene=yiaD;Parent=GCA000010485_03604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000747631.1,SO:0001217,UniParc:UPI0000D50D72,UniRef:UniRef100_A0A061KES0,UniRef:UniRef50_P37665,UniRef:UniRef90_P37665
contig_1	Pyrodigal	gene	3674531	3675505	.	+	.	ID=GCA000010485_03605_gene;locus_tag=GCA000010485_03605;gene=ghrB
contig_1	Pyrodigal	CDS	3674531	3675505	.	+	0	ID=GCA000010485_03605;Name=glyoxylate/hydroxypyruvate reductase GhrB;locus_tag=GCA000010485_03605;product=glyoxylate/hydroxypyruvate reductase GhrB;Dbxref=GO:0005829,GO:0005886,GO:0008465,GO:0016616,GO:0030267,GO:0051287,GO:0120509;gene=ghrB;Parent=GCA000010485_03605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000805025.1,SO:0001217,UniParc:UPI0001C22D35,UniRef:UniRef100_A0A3L4CZM8,UniRef:UniRef50_P37666,UniRef:UniRef90_P37666;ec_number=1.1.1.81
contig_1	Pyrodigal	gene	3675555	3676265	.	-	.	ID=GCA000010485_03606_gene;locus_tag=GCA000010485_03606;gene=yiaF
contig_1	Pyrodigal	CDS	3675555	3676265	.	-	0	ID=GCA000010485_03606;Name=putative protein YiaF;locus_tag=GCA000010485_03606;product=putative protein YiaF;Dbxref=GO:0044403;gene=yiaF;Parent=GCA000010485_03606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000190516.1,SO:0001217,UniParc:UPI00005EF4BF,UniRef:UniRef100_P0ADK0,UniRef:UniRef50_P0ADK0,UniRef:UniRef90_P0ADK0
contig_1	Pyrodigal	gene	3676699	3676989	.	+	.	ID=GCA000010485_03607_gene;locus_tag=GCA000010485_03607;gene=yiaG
contig_1	Pyrodigal	CDS	3676699	3676989	.	+	0	ID=GCA000010485_03607;Name=HTH-type transcriptional regulator;locus_tag=GCA000010485_03607;product=HTH-type transcriptional regulator;Dbxref=GO:0003677;gene=yiaG;Parent=GCA000010485_03607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2944,COG:K,RefSeq:WP_000455798.1,SO:0001217,UniParc:UPI000013B367,UniRef:UniRef100_P0A9V5,UniRef:UniRef50_P0A9V5,UniRef:UniRef90_P0A9V5
contig_1	Infernal	regulatory_region	3677110	3677537	4.4e-54	+	.	ID=EFPPCJGBKI_280;Name=cspA thermoregulator;product=cspA thermoregulator;Dbxref=RFAM:RF01766;inference=profile:Rfam:RF01766;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	3677270	3677482	.	+	.	ID=GCA000010485_03608_gene;locus_tag=GCA000010485_03608;gene=cspA
contig_1	Pyrodigal	CDS	3677270	3677482	.	+	0	ID=GCA000010485_03608;Name=Major cold shock protein;locus_tag=GCA000010485_03608;product=Major cold shock protein;Dbxref=GO:0003677,GO:0005829;gene=cspA;Parent=GCA000010485_03608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_000014594.1,SO:0001217,UniParc:UPI000003FF29,UniRef:UniRef100_P0A9X9,UniRef:UniRef50_P0A9X9,UniRef:UniRef90_P0A9X9
contig_1	Pyrodigal	gene	3677670	3677822	.	-	.	ID=GCA000010485_03609_gene;locus_tag=GCA000010485_03609;gene=hokA
contig_1	Pyrodigal	CDS	3677670	3677822	.	-	0	ID=GCA000010485_03609;Name=type I toxin-antitoxin system toxin HokA;locus_tag=GCA000010485_03609;product=type I toxin-antitoxin system toxin HokA;gene=hokA;Parent=GCA000010485_03609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001135731.1,SO:0001217,UniParc:UPI0001C22D37,UniRef:UniRef100_A0A061YDD9,UniRef:UniRef50_Q328L8,UniRef:UniRef90_Q328L8
contig_1	Infernal	gene	3677820	3677970	.	-	.	ID=GCA000010485_03610_gene;locus_tag=GCA000010485_03610;gene=sok
contig_1	Infernal	ncRNA	3677820	3677970	3.7e-21	-	.	ID=GCA000010485_03610;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_03610;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_03610_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_1	Pyrodigal	gene	3678144	3680213	.	-	.	ID=GCA000010485_03611_gene;locus_tag=GCA000010485_03611;gene=glyS
contig_1	Pyrodigal	CDS	3678144	3680213	.	-	0	ID=GCA000010485_03611;Name=Glycine--tRNA ligase beta subunit;locus_tag=GCA000010485_03611;product=Glycine--tRNA ligase beta subunit;Dbxref=GO:0004814,GO:0004820,GO:0005524,GO:0005829,GO:0006420,GO:0006426;gene=glyS;Parent=GCA000010485_03611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0751,COG:J,RefSeq:WP_001291788.1,SO:0001217,UniParc:UPI000016551D,UniRef:UniRef100_B7ULB9,UniRef:UniRef50_P00961,UniRef:UniRef90_P00961;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	3680223	3681134	.	-	.	ID=GCA000010485_03612_gene;locus_tag=GCA000010485_03612;gene=glyQ
contig_1	Pyrodigal	CDS	3680223	3681134	.	-	0	ID=GCA000010485_03612;Name=glycine--tRNA ligase subunit alpha;locus_tag=GCA000010485_03612;product=glycine--tRNA ligase subunit alpha;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005829,GO:0006426;gene=glyQ;Parent=GCA000010485_03612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0752,COG:J,KEGG:K01878,RefSeq:WP_001168544.1,SO:0001217,UniParc:UPI0000136476,UniRef:UniRef100_A8ARE6,UniRef:UniRef50_P00960,UniRef:UniRef90_P00960;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	3681229	3681528	.	-	.	ID=GCA000010485_03613_gene;locus_tag=GCA000010485_03613;gene=ysaB
contig_1	Pyrodigal	CDS	3681229	3681528	.	-	0	ID=GCA000010485_03613;Name=putative lipoprotein YsaB;locus_tag=GCA000010485_03613;product=putative lipoprotein YsaB;Dbxref=GO:0005886;gene=ysaB;Parent=GCA000010485_03613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000980102.1,SO:0001217,UniParc:UPI0000D50D75,UniRef:UniRef100_Q1R535,UniRef:UniRef50_Q2M7M3,UniRef:UniRef90_Q2M7M3
contig_1	Pyrodigal	gene	3681703	3682698	.	+	.	ID=GCA000010485_03614_gene;locus_tag=GCA000010485_03614;gene=wecH
contig_1	Pyrodigal	CDS	3681703	3682698	.	+	0	ID=GCA000010485_03614;Name=O-acetyltransferase WecH;locus_tag=GCA000010485_03614;product=O-acetyltransferase WecH;Dbxref=GO:0005886,GO:0009246,GO:0016413;gene=wecH;Parent=GCA000010485_03614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001182650,COG:COG3274,COG:M,RefSeq:WP_001182627.1,SO:0001217,UniParc:UPI0001C22D38,UniRef:UniRef100_A0A061Y8L3,UniRef:UniRef50_P37669,UniRef:UniRef90_P37669;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	3682740	3683177	.	-	.	ID=GCA000010485_03615_gene;locus_tag=GCA000010485_03615;gene=yiaA
contig_1	Pyrodigal	CDS	3682740	3683177	.	-	0	ID=GCA000010485_03615;Name=inner membrane protein YiaA;locus_tag=GCA000010485_03615;product=inner membrane protein YiaA;Dbxref=GO:0005886,GO:0006974;gene=yiaA;Parent=GCA000010485_03615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296516.1,SO:0001217,UniParc:UPI00005EF4BC,UniRef:UniRef100_A0A0G9FYM6,UniRef:UniRef50_P0ADJ8,UniRef:UniRef90_P0ADJ8
contig_1	Pyrodigal	gene	3683223	3683564	.	-	.	ID=GCA000010485_03616_gene;locus_tag=GCA000010485_03616;gene=yiaB
contig_1	Pyrodigal	CDS	3683223	3683564	.	-	0	ID=GCA000010485_03616;Name=inner membrane protein YiaB;locus_tag=GCA000010485_03616;product=inner membrane protein YiaB;gene=yiaB;Parent=GCA000010485_03616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296517.1,SO:0001217,UniParc:UPI0000DAD07D,UniRef:UniRef100_E2QGS5,UniRef:UniRef50_P11286,UniRef:UniRef90_Q1R532
contig_1	Pyrodigal	gene	3683733	3685187	.	-	.	ID=GCA000010485_03617_gene;locus_tag=GCA000010485_03617;gene=xylB
contig_1	Pyrodigal	CDS	3683733	3685187	.	-	0	ID=GCA000010485_03617;Name=xylulokinase;locus_tag=GCA000010485_03617;product=xylulokinase;Dbxref=GO:0004856,GO:0005524,GO:0005997,GO:0005998,GO:0042803,GO:0042843,GO:0103020;gene=xylB;Parent=GCA000010485_03617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00854,RefSeq:WP_000275338.1,SO:0001217,UniParc:UPI0001C22D39,UniRef:UniRef100_A0A066TAP2,UniRef:UniRef50_P09099,UniRef:UniRef90_P09099;ec_number=2.7.1.17
contig_1	Pyrodigal	gene	3685258	3686580	.	-	.	ID=GCA000010485_03618_gene;locus_tag=GCA000010485_03618;gene=xylA
contig_1	Pyrodigal	CDS	3685258	3686580	.	-	0	ID=GCA000010485_03618;Name=xylose isomerase;locus_tag=GCA000010485_03618;product=xylose isomerase;Dbxref=GO:0000287,GO:0005737,GO:0009045,GO:0042732;gene=xylA;Parent=GCA000010485_03618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2115,COG:G,RefSeq:WP_001149592.1,SO:0001217,UniParc:UPI00003BF818,UniRef:UniRef100_B7ULC6,UniRef:UniRef50_P00944,UniRef:UniRef90_P00944;ec_number=5.3.1.5
contig_1	Pyrodigal	gene	3686946	3687938	.	+	.	ID=GCA000010485_03619_gene;locus_tag=GCA000010485_03619;gene=xylF
contig_1	Pyrodigal	CDS	3686946	3687938	.	+	0	ID=GCA000010485_03619;Name=D-xylose ABC transporter substrate-binding protein;locus_tag=GCA000010485_03619;product=D-xylose ABC transporter substrate-binding protein;Dbxref=GO:0015752,GO:0015753,GO:0016020,GO:0030246,GO:0030288,GO:0042732,GO:0048029,GO:0055052;gene=xylF;Parent=GCA000010485_03619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4213,COG:G,RefSeq:WP_001296518.1,SO:0001217,UniParc:UPI0000DAD07E,UniRef:UniRef100_E2QGS8,UniRef:UniRef50_P37387,UniRef:UniRef90_P37387
contig_1	Pyrodigal	gene	3688016	3689557	.	+	.	ID=GCA000010485_03620_gene;locus_tag=GCA000010485_03620;gene=xylG
contig_1	Pyrodigal	CDS	3688016	3689557	.	+	0	ID=GCA000010485_03620;Name=D-xylose ABC transporter ATP-binding protein;locus_tag=GCA000010485_03620;product=D-xylose ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015614,GO:0015753,GO:0016020,GO:0016887;gene=xylG;Parent=GCA000010485_03620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001146503.1,SO:0001217,UniParc:UPI0000EAE071,UniRef:UniRef100_Q8FCE2,UniRef:UniRef50_P37388,UniRef:UniRef90_P37388;ec_number=7.5.2.10
contig_1	Pyrodigal	gene	3689535	3690716	.	+	.	ID=GCA000010485_03621_gene;locus_tag=GCA000010485_03621;gene=xylH
contig_1	Pyrodigal	CDS	3689535	3690716	.	+	0	ID=GCA000010485_03621;Name=xylose ABC transporter permease XylH;locus_tag=GCA000010485_03621;product=xylose ABC transporter permease XylH;Dbxref=GO:0005886,GO:0022857;gene=xylH;Parent=GCA000010485_03621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000045978,COG:COG4214,COG:G,KEGG:K10544,RefSeq:WP_000045978.1,SO:0001217,UniParc:UPI0000139065,UniRef:UniRef100_P0AGI4,UniRef:UniRef50_P0AGI4,UniRef:UniRef90_P0AGI4;ec_number=7.5.2.-
contig_1	Pyrodigal	gene	3690794	3691972	.	+	.	ID=GCA000010485_03622_gene;locus_tag=GCA000010485_03622;gene=xylR
contig_1	Pyrodigal	CDS	3690794	3691972	.	+	0	ID=GCA000010485_03622;Name=DNA-binding transcriptional regulator XylR;locus_tag=GCA000010485_03622;product=DNA-binding transcriptional regulator XylR;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=xylR;Parent=GCA000010485_03622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000494484,COG:COG2207,COG:K,RefSeq:WP_000494484.1,SO:0001217,UniParc:UPI000013906B,UniRef:UniRef100_P0ACI3,UniRef:UniRef50_P0ACI3,UniRef:UniRef90_P0ACI3
contig_1	Pyrodigal	gene	3692080	3692904	.	-	.	ID=GCA000010485_03623_gene;locus_tag=GCA000010485_03623;gene=bax
contig_1	Pyrodigal	CDS	3692080	3692904	.	-	0	ID=GCA000010485_03623;Name=protein bax;locus_tag=GCA000010485_03623;product=protein bax;Dbxref=GO:0004040,GO:0005524;gene=bax;Parent=GCA000010485_03623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2992,COG:R,RefSeq:WP_001297957.1,SO:0001217,UniParc:UPI00000DF1F7,UniRef:UniRef100_P27297,UniRef:UniRef50_P27297,UniRef:UniRef90_P27297
contig_1	Bakta	gene	3692904	3692930	.	-	.	ID=GCA000010485_03624_gene;locus_tag=GCA000010485_03624;inference=ab initio prediction:Bakta;gene=baxL
contig_1	Bakta	CDS	3692904	3692930	.	-	0	ID=GCA000010485_03624;Name=Putative translational regulatory protein BaxL;locus_tag=GCA000010485_03624;product=Putative translational regulatory protein BaxL;Dbxref=GO:0006417;gene=baxL;Parent=GCA000010485_03624_gene;Note=RefSeq:WP_211180514.1,SO:0001217,UniParc:UPI00107E63B5,UniRef:UniRef100_P0DSH2
contig_1	Pyrodigal	gene	3693224	3695254	.	+	.	ID=GCA000010485_03625_gene;locus_tag=GCA000010485_03625;gene=malS
contig_1	Pyrodigal	CDS	3693224	3695254	.	+	0	ID=GCA000010485_03625;Name=alpha-amylase;locus_tag=GCA000010485_03625;product=alpha-amylase;Dbxref=GO:0004556,GO:0005509,GO:0009313,GO:0030288,GO:0030980,GO:0042597;gene=malS;Parent=GCA000010485_03625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01176,RefSeq:WP_000761239.1,SO:0001217,UniParc:UPI0001C22DDD,UniRef:UniRef100_A0A066T6C2,UniRef:UniRef50_P25718,UniRef:UniRef90_P25718;ec_number=3.2.1.1
contig_1	Pyrodigal	gene	3695432	3696685	.	+	.	ID=GCA000010485_03626_gene;locus_tag=GCA000010485_03626;gene=avtA
contig_1	Pyrodigal	CDS	3695432	3696685	.	+	0	ID=GCA000010485_03626;Name=valine--pyruvate transaminase;locus_tag=GCA000010485_03626;product=valine--pyruvate transaminase;gene=avtA;Parent=GCA000010485_03626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3977,COG:E,KEGG:K00835,RefSeq:WP_000144359.1,SO:0001217,UniParc:UPI00005EF4B9,UniRef:UniRef100_E2QGT4,UniRef:UniRef50_P09053,UniRef:UniRef90_W8TB91;ec_number=2.6.1.66
contig_1	Pyrodigal	gene	3696724	3697197	.	-	.	ID=GCA000010485_03627_gene;locus_tag=GCA000010485_03627;gene=ysaA
contig_1	Pyrodigal	CDS	3696724	3697197	.	-	0	ID=GCA000010485_03627;Name=Putative electron transport protein YsaA;locus_tag=GCA000010485_03627;product=Putative electron transport protein YsaA;Dbxref=GO:0009055,GO:0046872,GO:0051539;gene=ysaA;Parent=GCA000010485_03627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1142,RefSeq:WP_001296520.1,SO:0001217,UniParc:UPI00019F3BCE,UniRef:UniRef100_A0A023L8A1,UniRef:UniRef50_P56256,UniRef:UniRef90_P56256
contig_1	Pyrodigal	gene	3697299	3698147	.	-	.	ID=GCA000010485_03628_gene;locus_tag=GCA000010485_03628;gene=yiaJ
contig_1	Pyrodigal	CDS	3697299	3698147	.	-	0	ID=GCA000010485_03628;Name=IclR family transcriptional regulator YiaJ;locus_tag=GCA000010485_03628;product=IclR family transcriptional regulator YiaJ;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=yiaJ;Parent=GCA000010485_03628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000514240,COG:COG1414,COG:K,KEGG:K21602,RefSeq:WP_000514241.1,SO:0001217,UniParc:UPI00000DF1FB,UniRef:UniRef100_E2QGT6,UniRef:UniRef50_P37671,UniRef:UniRef90_P37671
contig_1	Pyrodigal	gene	3698348	3699346	.	+	.	ID=GCA000010485_03629_gene;locus_tag=GCA000010485_03629;gene=yiaK
contig_1	Pyrodigal	CDS	3698348	3699346	.	+	0	ID=GCA000010485_03629;Name=3-dehydro-L-gulonate 2-dehydrogenase;locus_tag=GCA000010485_03629;product=3-dehydro-L-gulonate 2-dehydrogenase;Dbxref=GO:0005737,GO:0047559,GO:0070403;gene=yiaK;Parent=GCA000010485_03629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2055,RefSeq:WP_000869035.1,SO:0001217,UniParc:UPI000188794B,UniRef:UniRef100_B7N223,UniRef:UniRef50_P37672,UniRef:UniRef90_P37672;ec_number=1.1.1.130
contig_1	Pyrodigal	gene	3699358	3699822	.	+	.	ID=GCA000010485_03630_gene;locus_tag=GCA000010485_03630;gene=yiaL
contig_1	Pyrodigal	CDS	3699358	3699822	.	+	0	ID=GCA000010485_03630;Name=Protein YiaL;locus_tag=GCA000010485_03630;product=Protein YiaL;Dbxref=GO:0005829,GO:0009314;gene=yiaL;Parent=GCA000010485_03630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19334,RefSeq:WP_000576089.1,SO:0001217,UniParc:UPI0001C22DDE,UniRef:UniRef100_A0A061KE95,UniRef:UniRef50_P37673,UniRef:UniRef90_P37673
contig_1	Pyrodigal	gene	3699845	3700765	.	+	.	ID=GCA000010485_03631_gene;locus_tag=GCA000010485_03631
contig_1	Pyrodigal	CDS	3699845	3700765	.	+	0	ID=GCA000010485_03631;Name=DUF4862 domain-containing protein;locus_tag=GCA000010485_03631;product=DUF4862 domain-containing protein;Parent=GCA000010485_03631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000856275.1,SO:0001217,UniParc:UPI0001C22DDF,UniRef:UniRef100_A0A061KEP3,UniRef:UniRef50_A1XPK1,UniRef:UniRef90_A0A0D8VY73
contig_1	Pyrodigal	gene	3700879	3701346	.	+	.	ID=GCA000010485_03632_gene;locus_tag=GCA000010485_03632;gene=yiaM
contig_1	Pyrodigal	CDS	3700879	3701346	.	+	0	ID=GCA000010485_03632;Name=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;locus_tag=GCA000010485_03632;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;Dbxref=GO:0031317;gene=yiaM;Parent=GCA000010485_03632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000821446.1,SO:0001217,UniParc:UPI0000DAD080,UniRef:UniRef100_A0A067HCF5,UniRef:UniRef50_P37674,UniRef:UniRef90_A0A067HCF5
contig_1	Pyrodigal	gene	3701349	3702626	.	+	.	ID=GCA000010485_03633_gene;locus_tag=GCA000010485_03633;gene=yiaN
contig_1	Pyrodigal	CDS	3701349	3702626	.	+	0	ID=GCA000010485_03633;Name=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;locus_tag=GCA000010485_03633;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;Dbxref=GO:0031317;gene=yiaN;Parent=GCA000010485_03633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000153839.1,SO:0001217,UniParc:UPI00000DF200,UniRef:UniRef100_A0A327I0B2,UniRef:UniRef50_P37675,UniRef:UniRef90_A0A5R8UHW9
contig_1	Pyrodigal	gene	3702639	3703625	.	+	.	ID=GCA000010485_03634_gene;locus_tag=GCA000010485_03634;gene=yiaO
contig_1	Pyrodigal	CDS	3702639	3703625	.	+	0	ID=GCA000010485_03634;Name=2%2C3-diketo-L-gulonate transporter substrate-binding protein YiaO;locus_tag=GCA000010485_03634;product=2%2C3-diketo-L-gulonate transporter substrate-binding protein YiaO;Dbxref=GO:0006974,GO:0008643,GO:0016020,GO:0030246,GO:0030288,GO:0031317,GO:0034219,GO:1900190,GO:1902075;gene=yiaO;Parent=GCA000010485_03634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000776887,RefSeq:WP_000776929.1,SO:0001217,UniParc:UPI0001C22DE0,UniRef:UniRef100_A0A061K9L9,UniRef:UniRef50_P37676,UniRef:UniRef90_P37676
contig_1	Pyrodigal	gene	3703629	3705125	.	+	.	ID=GCA000010485_03635_gene;locus_tag=GCA000010485_03635;gene=lyxK
contig_1	Pyrodigal	CDS	3703629	3705125	.	+	0	ID=GCA000010485_03635;Name=L-xylulokinase;locus_tag=GCA000010485_03635;product=L-xylulokinase;Dbxref=GO:0005524,GO:0008744,GO:0016773,GO:0019324,GO:0042803;gene=lyxK;Parent=GCA000010485_03635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000196054,RefSeq:WP_000196111.1,SO:0001217,UniParc:UPI0001C22DE1,UniRef:UniRef100_A0A066T6D3,UniRef:UniRef50_P37677,UniRef:UniRef90_P37677;ec_number=2.7.1.53
contig_1	Pyrodigal	gene	3705122	3705784	.	+	.	ID=GCA000010485_03636_gene;locus_tag=GCA000010485_03636;gene=ulaD
contig_1	Pyrodigal	CDS	3705122	3705784	.	+	0	ID=GCA000010485_03636;Name=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;locus_tag=GCA000010485_03636;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;Dbxref=GO:0004590,GO:0006207,GO:0016052,GO:0019854,GO:0033982,GO:0046872;gene=ulaD;Parent=GCA000010485_03636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03078,RefSeq:WP_000089476.1,SO:0001217,UniParc:UPI0001C22DE2,UniRef:UniRef100_A0A061YCJ6,UniRef:UniRef50_P37678,UniRef:UniRef90_P37678;ec_number=4.1.1.85
contig_1	Pyrodigal	gene	3705777	3706637	.	+	.	ID=GCA000010485_03637_gene;locus_tag=GCA000010485_03637;gene=sgbU
contig_1	Pyrodigal	CDS	3705777	3706637	.	+	0	ID=GCA000010485_03637;Name=L-ribulose-5-phosphate 3-epimerase;locus_tag=GCA000010485_03637;product=L-ribulose-5-phosphate 3-epimerase;Dbxref=GO:0003677,GO:0005975,GO:0006281,GO:0008270,GO:0016861,GO:0019324,GO:0019852,GO:0034015;gene=sgbU;Parent=GCA000010485_03637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3623,COG:G,RefSeq:WP_001545675.1,SO:0001217,UniParc:UPI0001C22DE3,UniRef:UniRef100_A0A7I0KWR2,UniRef:UniRef50_P37679,UniRef:UniRef90_P37679;ec_number=5.1.3.22
contig_1	Pyrodigal	gene	3706631	3707326	.	+	.	ID=GCA000010485_03638_gene;locus_tag=GCA000010485_03638;gene=araD
contig_1	Pyrodigal	CDS	3706631	3707326	.	+	0	ID=GCA000010485_03638;Name=L-ribulose-5-phosphate 4-epimerase;locus_tag=GCA000010485_03638;product=L-ribulose-5-phosphate 4-epimerase;Dbxref=GO:0005829,GO:0008270,GO:0008742,GO:0016832,GO:0019323,GO:0019324,GO:0019568,GO:0019572;gene=araD;Parent=GCA000010485_03638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000893156.1,SO:0001217,UniParc:UPI00000DF205,UniRef:UniRef100_A0A061YEX3,UniRef:UniRef50_P08203,UniRef:UniRef90_P37680;ec_number=5.1.3.4
contig_1	Pyrodigal	gene	3707358	3708173	.	-	.	ID=GCA000010485_03639_gene;locus_tag=GCA000010485_03639
contig_1	Pyrodigal	CDS	3707358	3708173	.	-	0	ID=GCA000010485_03639;Name=Arabinose operon regulatory protein;locus_tag=GCA000010485_03639;product=Arabinose operon regulatory protein;Parent=GCA000010485_03639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000891826.1,SO:0001217,UniParc:UPI0001C22DE4,UniRef:UniRef100_A0A061YGP3,UniRef:UniRef50_A0A0D8W9T9,UniRef:UniRef90_A0A0D8W9T9
contig_1	Pyrodigal	gene	3708399	3709799	.	+	.	ID=GCA000010485_03640_gene;locus_tag=GCA000010485_03640
contig_1	Pyrodigal	CDS	3708399	3709799	.	+	0	ID=GCA000010485_03640;Name=Permease;locus_tag=GCA000010485_03640;product=Permease;Parent=GCA000010485_03640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000204823.1,SO:0001217,UniParc:UPI0001C22DE5,UniRef:UniRef100_A0A7I0KWQ5,UniRef:UniRef50_A0A0H3CER2,UniRef:UniRef90_A0A3S4P1R9
contig_1	Pyrodigal	gene	3709810	3711783	.	+	.	ID=GCA000010485_03641_gene;locus_tag=GCA000010485_03641
contig_1	Pyrodigal	CDS	3709810	3711783	.	+	0	ID=GCA000010485_03641;Name=Glycoside hydrolase family 127 protein;locus_tag=GCA000010485_03641;product=Glycoside hydrolase family 127 protein;Parent=GCA000010485_03641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09955,SO:0001217,UniParc:UPI0001C22DE6,UniRef:UniRef100_A0A3K0QGT6,UniRef:UniRef50_A0A1B8P5Z1,UniRef:UniRef90_A0A9Q6ZBJ7
contig_1	Infernal	gene	3711858	3711900	.	+	.	ID=GCA000010485_03642_gene;locus_tag=GCA000010485_03642;gene=ES036
contig_1	Infernal	ncRNA	3711858	3711900	5.2e-05	+	.	ID=GCA000010485_03642;Name=ES036 (CssrF) sRNA;locus_tag=GCA000010485_03642;product=ES036 (CssrF) sRNA;Dbxref=RFAM:RF02751;Parent=GCA000010485_03642_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02751
contig_1	Pyrodigal	gene	3711960	3713498	.	-	.	ID=GCA000010485_03643_gene;locus_tag=GCA000010485_03643;gene=aldB
contig_1	Pyrodigal	CDS	3711960	3713498	.	-	0	ID=GCA000010485_03643;Name=aldehyde dehydrogenase AldB;locus_tag=GCA000010485_03643;product=aldehyde dehydrogenase AldB;Dbxref=GO:0004029,GO:0006974,GO:0016491,GO:0033721,GO:0045471;gene=aldB;Parent=GCA000010485_03643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000183980,COG:COG1012,COG:I,RefSeq:WP_000183978.1,SO:0001217,UniParc:UPI0000F0BDF2,UniRef:UniRef100_A0A061K0L8,UniRef:UniRef50_P37685,UniRef:UniRef90_P37685;ec_number=1.2.1.4
contig_1	Pyrodigal	gene	3713606	3714901	.	-	.	ID=GCA000010485_03644_gene;locus_tag=GCA000010485_03644
contig_1	Pyrodigal	CDS	3713606	3714901	.	-	0	ID=GCA000010485_03644;Name=Fido domain-containing protein;locus_tag=GCA000010485_03644;product=Fido domain-containing protein;Parent=GCA000010485_03644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985737.1,SO:0001217,UniParc:UPI000191E484,UniRef:UniRef100_E2QGU8,UniRef:UniRef50_U7QU54,UniRef:UniRef90_A0A4C7B0M4
contig_1	Pyrodigal	gene	3715031	3716182	.	-	.	ID=GCA000010485_03645_gene;locus_tag=GCA000010485_03645;gene=yiaY
contig_1	Pyrodigal	CDS	3715031	3716182	.	-	0	ID=GCA000010485_03645;Name=L-threonine dehydrogenase;locus_tag=GCA000010485_03645;product=L-threonine dehydrogenase;Dbxref=GO:0004022,GO:0008743,GO:0016491,GO:0046872;gene=yiaY;Parent=GCA000010485_03645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000741500.1,SO:0001217,UniParc:UPI0000D50D82,UniRef:UniRef100_E2QGU9,UniRef:UniRef50_P37686,UniRef:UniRef90_P37686;ec_number=1.1.1.103
contig_1	Pyrodigal	gene	3716373	3718217	.	-	.	ID=GCA000010485_03646_gene;locus_tag=GCA000010485_03646;gene=selB
contig_1	Pyrodigal	CDS	3716373	3718217	.	-	0	ID=GCA000010485_03646;Name=selenocysteine-specific translation elongation factor;locus_tag=GCA000010485_03646;product=selenocysteine-specific translation elongation factor;Dbxref=GO:0000049,GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0016259,GO:0019003,GO:0035368;gene=selB;Parent=GCA000010485_03646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3276,COG:J,RefSeq:WP_000582434.1,SO:0001217,UniParc:UPI0001C22DE7,UniRef:UniRef100_A0A7I0L6A6,UniRef:UniRef50_P14081,UniRef:UniRef90_P14081
contig_1	Pyrodigal	gene	3718214	3719605	.	-	.	ID=GCA000010485_03647_gene;locus_tag=GCA000010485_03647;gene=selA
contig_1	Pyrodigal	CDS	3718214	3719605	.	-	0	ID=GCA000010485_03647;Name=L-seryl-tRNA(Sec) selenium transferase;locus_tag=GCA000010485_03647;product=L-seryl-tRNA(Sec) selenium transferase;Dbxref=GO:0001514,GO:0001717,GO:0004125,GO:0005737;gene=selA;Parent=GCA000010485_03647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1921,COG:J,KEGG:K01042,RefSeq:WP_000206260.1,SO:0001217,UniParc:UPI0001C22DE8,UniRef:UniRef100_A0A066TAL1,UniRef:UniRef50_P0A821,UniRef:UniRef90_P0A821;ec_number=2.9.1.1
contig_1	Pyrodigal	gene	3719703	3720311	.	-	.	ID=GCA000010485_03648_gene;locus_tag=GCA000010485_03648;gene=yibF
contig_1	Pyrodigal	CDS	3719703	3720311	.	-	0	ID=GCA000010485_03648;Name=glutathione S-transferase;locus_tag=GCA000010485_03648;product=glutathione S-transferase;Dbxref=GO:0004364,GO:0005515,GO:0005829,GO:0006559,GO:0006749,GO:0016034;gene=yibF;Parent=GCA000010485_03648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_000779792.1,SO:0001217,UniParc:UPI000013B381,UniRef:UniRef100_P0ACA1,UniRef:UniRef50_P0ACA1,UniRef:UniRef90_P0ACA1;ec_number=2.5.1.18
contig_1	Pyrodigal	gene	3720382	3721518	.	-	.	ID=GCA000010485_03649_gene;locus_tag=GCA000010485_03649;gene=yibH
contig_1	Pyrodigal	CDS	3720382	3721518	.	-	0	ID=GCA000010485_03649;Name=Inner membrane protein YibH;locus_tag=GCA000010485_03649;product=Inner membrane protein YibH;gene=yibH;Parent=GCA000010485_03649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000364934.1,SO:0001217,UniParc:UPI00000DF20B,UniRef:UniRef100_A0A0D8VGA6,UniRef:UniRef50_P37683,UniRef:UniRef90_A0A0H2Z3V3
contig_1	Pyrodigal	gene	3721521	3721883	.	-	.	ID=GCA000010485_03650_gene;locus_tag=GCA000010485_03650;gene=yibI
contig_1	Pyrodigal	CDS	3721521	3721883	.	-	0	ID=GCA000010485_03650;Name=putative protein YibI;locus_tag=GCA000010485_03650;product=putative protein YibI;Dbxref=GO:0005886;gene=yibI;Parent=GCA000010485_03650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000479624.1,SO:0001217,UniParc:UPI000013B384,UniRef:UniRef100_P32108,UniRef:UniRef50_P32108,UniRef:UniRef90_P32108
contig_1	Pyrodigal	gene	3722420	3724333	.	+	.	ID=GCA000010485_03651_gene;locus_tag=GCA000010485_03651;gene=mtlA
contig_1	Pyrodigal	CDS	3722420	3724333	.	+	0	ID=GCA000010485_03651;Name=PTS mannitol transporter subunit IICBA;locus_tag=GCA000010485_03651;product=PTS mannitol transporter subunit IICBA;Dbxref=GO:0005886,GO:0009401,GO:0016301,GO:0022872,GO:0090563;gene=mtlA;Parent=GCA000010485_03651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000093247,COG:COG4668,COG:G,KEGG:K02800,RefSeq:WP_000093245.1,SO:0001217,UniParc:UPI0001C22DE9,UniRef:UniRef100_A0A066T6E8,UniRef:UniRef50_P00550,UniRef:UniRef90_P00550;ec_number=2.7.1.198
contig_1	Infernal	gene	3724429	3724506	.	+	.	ID=GCA000010485_03652_gene;locus_tag=GCA000010485_03652;gene=naRNA4
contig_1	Infernal	ncRNA	3724429	3724506	1.7e-11	+	.	ID=GCA000010485_03652;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_03652;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_03652_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	3724653	3725801	.	+	.	ID=GCA000010485_03653_gene;locus_tag=GCA000010485_03653;gene=mtlD
contig_1	Pyrodigal	CDS	3724653	3725801	.	+	0	ID=GCA000010485_03653;Name=mannitol-1-phosphate 5-dehydrogenase;locus_tag=GCA000010485_03653;product=mannitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0005829,GO:0008926,GO:0019592,GO:0019594;gene=mtlD;Parent=GCA000010485_03653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00009,RefSeq:WP_000645408.1,SO:0001217,UniParc:UPI0001C22DEA,UniRef:UniRef100_A0A066TAS4,UniRef:UniRef50_P09424,UniRef:UniRef90_Q8FCB7;ec_number=1.1.1.17
contig_1	Pyrodigal	gene	3725801	3726388	.	+	.	ID=GCA000010485_03654_gene;locus_tag=GCA000010485_03654;gene=mtlR
contig_1	Pyrodigal	CDS	3725801	3726388	.	+	0	ID=GCA000010485_03654;Name=mannitol operon repressor MtlR;locus_tag=GCA000010485_03654;product=mannitol operon repressor MtlR;Dbxref=GO:0045892;gene=mtlR;Parent=GCA000010485_03654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000228269,KEGG:K02562,RefSeq:WP_000228269.1,SO:0001217,UniParc:UPI000012F7F3,UniRef:UniRef100_P0AF10,UniRef:UniRef50_P0AF10,UniRef:UniRef90_P0AF10
contig_1	Pyrodigal	gene	3726399	3726608	.	-	.	ID=GCA000010485_03655_gene;locus_tag=GCA000010485_03655;gene=yibT
contig_1	Pyrodigal	CDS	3726399	3726608	.	-	0	ID=GCA000010485_03655;Name=putative protein YibT;locus_tag=GCA000010485_03655;product=putative protein YibT;gene=yibT;Parent=GCA000010485_03655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000517097.1,SO:0001217,UniParc:UPI00000DF20F,UniRef:UniRef100_Q8FCB6,UniRef:UniRef50_Q2M7R5,UniRef:UniRef90_Q2M7R5
contig_1	Pyrodigal	gene	3726892	3727254	.	+	.	ID=GCA000010485_03656_gene;locus_tag=GCA000010485_03656;gene=yibL
contig_1	Pyrodigal	CDS	3726892	3727254	.	+	0	ID=GCA000010485_03656;Name=YibL family ribosome-associated protein;locus_tag=GCA000010485_03656;product=YibL family ribosome-associated protein;Dbxref=GO:0005829;gene=yibL;Parent=GCA000010485_03656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14762,RefSeq:WP_000665680.1,SO:0001217,UniParc:UPI0000001093,UniRef:UniRef100_P0ADK8,UniRef:UniRef50_P0ADK8,UniRef:UniRef90_P0ADK8
contig_1	Pyrodigal	gene	3727798	3728478	.	+	.	ID=GCA000010485_03657_gene;locus_tag=GCA000010485_03657
contig_1	Pyrodigal	CDS	3727798	3728478	.	+	0	ID=GCA000010485_03657;Name=DUF3251 domain-containing protein;locus_tag=GCA000010485_03657;product=DUF3251 domain-containing protein;Parent=GCA000010485_03657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062145.1,SO:0001217,UniParc:UPI0001C22DEC,UniRef:UniRef100_A0A061YE91,UniRef:UniRef50_A0A701ZAC5,UniRef:UniRef90_A0A061YE91
contig_1	Pyrodigal	gene	3728522	3732865	.	+	.	ID=GCA000010485_03658_gene;locus_tag=GCA000010485_03658
contig_1	Pyrodigal	CDS	3728522	3732865	.	+	0	ID=GCA000010485_03658;Name=Adhesin;locus_tag=GCA000010485_03658;product=Adhesin;Parent=GCA000010485_03658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033262.1,SO:0001217,UniParc:UPI0001C22C12,UniRef:UniRef100_A0A061YFD6,UniRef:UniRef50_Q7DJ60,UniRef:UniRef90_A0A061YFD6
contig_1	Pyrodigal	gene	3733283	3734938	.	+	.	ID=GCA000010485_03659_gene;locus_tag=GCA000010485_03659;gene=lldP
contig_1	Pyrodigal	CDS	3733283	3734938	.	+	0	ID=GCA000010485_03659;Name=L-lactate permease;locus_tag=GCA000010485_03659;product=L-lactate permease;Dbxref=GO:0005886,GO:0015129,GO:0015295,GO:0015727;gene=lldP;Parent=GCA000010485_03659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K00427,RefSeq:WP_001296525.1,SO:0001217,UniParc:UPI0001C22C13,UniRef:UniRef100_A0A061YBW2,UniRef:UniRef50_P33231,UniRef:UniRef90_P33231
contig_1	Pyrodigal	gene	3734938	3735714	.	+	.	ID=GCA000010485_03660_gene;locus_tag=GCA000010485_03660;gene=lldR
contig_1	Pyrodigal	CDS	3734938	3735714	.	+	0	ID=GCA000010485_03660;Name=transcriptional regulator LldR;locus_tag=GCA000010485_03660;product=transcriptional regulator LldR;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=lldR;Parent=GCA000010485_03660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,RefSeq:WP_001296526.1,SO:0001217,UniParc:UPI0001C22C14,UniRef:UniRef100_A0A061Y7Y7,UniRef:UniRef50_P0ACL7,UniRef:UniRef90_P0ACL7
contig_1	Pyrodigal	gene	3735711	3736901	.	+	.	ID=GCA000010485_03661_gene;locus_tag=GCA000010485_03661;gene=lldD
contig_1	Pyrodigal	CDS	3735711	3736901	.	+	0	ID=GCA000010485_03661;Name=quinone-dependent L-lactate dehydrogenase;locus_tag=GCA000010485_03661;product=quinone-dependent L-lactate dehydrogenase;Dbxref=GO:0004457,GO:0004459,GO:0005886,GO:0006089,GO:0009060,GO:0010181;gene=lldD;Parent=GCA000010485_03661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000586962,BlastRules:WP_003899057,BlastRules:WP_011015490,COG:CIR,COG:COG1304,RefSeq:WP_000586976.1,SO:0001217,UniParc:UPI00000DF212,UniRef:UniRef100_Q8FCB1,UniRef:UniRef50_P33232,UniRef:UniRef90_Q8ZL61;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	3736949	3737422	.	+	.	ID=GCA000010485_03662_gene;locus_tag=GCA000010485_03662;gene=trmL
contig_1	Pyrodigal	CDS	3736949	3737422	.	+	0	ID=GCA000010485_03662;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA000010485_03662;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0001510,GO:0002131,GO:0002132,GO:0003723,GO:0005737,GO:0008173,GO:0042803,GO:0141098,GO:0141102;gene=trmL;Parent=GCA000010485_03662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_000932347.1,SO:0001217,UniParc:UPI000013B386,UniRef:UniRef100_P0AGJ7,UniRef:UniRef50_P0AGJ7,UniRef:UniRef90_P0AGJ7;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	3737475	3738296	.	-	.	ID=GCA000010485_03663_gene;locus_tag=GCA000010485_03663;gene=cysE
contig_1	Pyrodigal	CDS	3737475	3738296	.	-	0	ID=GCA000010485_03663;Name=serine O-acetyltransferase;locus_tag=GCA000010485_03663;product=serine O-acetyltransferase;Dbxref=GO:0005737,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000010485_03663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001277561.1,SO:0001217,UniParc:UPI000002DB2D,UniRef:UniRef100_P0A9D4,UniRef:UniRef50_P0A9D4,UniRef:UniRef90_P0A9D4;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	3738376	3739395	.	-	.	ID=GCA000010485_03664_gene;locus_tag=GCA000010485_03664;gene=gpsA
contig_1	Pyrodigal	CDS	3738376	3739395	.	-	0	ID=GCA000010485_03664;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000010485_03664;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006072,GO:0046167,GO:0046168,GO:0046474,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000010485_03664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_001076194.1,SO:0001217,UniParc:UPI000012B987,UniRef:UniRef100_P0A6S7,UniRef:UniRef50_P0A6S7,UniRef:UniRef90_P0A6S7;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	3739395	3739862	.	-	.	ID=GCA000010485_03665_gene;locus_tag=GCA000010485_03665;gene=secB
contig_1	Pyrodigal	CDS	3739395	3739862	.	-	0	ID=GCA000010485_03665;Name=protein-export chaperone SecB;locus_tag=GCA000010485_03665;product=protein-export chaperone SecB;Dbxref=GO:0005737,GO:0006457,GO:0015031,GO:0051082,GO:0051262;gene=secB;Parent=GCA000010485_03665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1952,COG:U,KEGG:K03071,RefSeq:WP_000003382.1,SO:0001217,UniParc:UPI00005E3849,UniRef:UniRef100_B7ULG5,UniRef:UniRef50_A7MID6,UniRef:UniRef90_A7MID6
contig_1	Pyrodigal	gene	3739926	3740177	.	-	.	ID=GCA000010485_03666_gene;locus_tag=GCA000010485_03666;gene=grxC
contig_1	Pyrodigal	CDS	3739926	3740177	.	-	0	ID=GCA000010485_03666;Name=glutaredoxin 3;locus_tag=GCA000010485_03666;product=glutaredoxin 3;Dbxref=GO:0005737,GO:0005829,GO:0009263,GO:0015035,GO:0015038,GO:0034599,GO:0043295,GO:0045454;gene=grxC;Parent=GCA000010485_03666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,RefSeq:WP_000024392.1,SO:0001217,UniParc:UPI000016551F,UniRef:UniRef100_P0AC62,UniRef:UniRef50_P0AC62,UniRef:UniRef90_P0AC62
contig_1	Pyrodigal	gene	3740318	3740749	.	-	.	ID=GCA000010485_03667_gene;locus_tag=GCA000010485_03667;gene=yibN
contig_1	Pyrodigal	CDS	3740318	3740749	.	-	0	ID=GCA000010485_03667;Name=putative protein YibN;locus_tag=GCA000010485_03667;product=putative protein YibN;Dbxref=GO:0005829;gene=yibN;Parent=GCA000010485_03667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_001156181.1,SO:0001217,UniParc:UPI000013B388,UniRef:UniRef100_P0AG27,UniRef:UniRef50_P0AG27,UniRef:UniRef90_P0AG27
contig_1	Pyrodigal	gene	3740993	3742537	.	+	.	ID=GCA000010485_03668_gene;locus_tag=GCA000010485_03668;gene=gpmM
contig_1	Pyrodigal	CDS	3740993	3742537	.	+	0	ID=GCA000010485_03668;Name=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;locus_tag=GCA000010485_03668;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;Dbxref=GO:0004619,GO:0005829,GO:0006007,GO:0006096,GO:0030145,GO:0046537;gene=gpmM;Parent=GCA000010485_03668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0696,COG:G,RefSeq:WP_001296527.1,SO:0001217,UniParc:UPI000191EA52,UniRef:UniRef100_E2QGX0,UniRef:UniRef50_Q9HU53,UniRef:UniRef90_Q329P2;ec_number=5.4.2.12
contig_1	Pyrodigal	gene	3742571	3743830	.	+	.	ID=GCA000010485_03669_gene;locus_tag=GCA000010485_03669;gene=envC
contig_1	Pyrodigal	CDS	3742571	3743830	.	+	0	ID=GCA000010485_03669;Name=murein hydrolase activator EnvC;locus_tag=GCA000010485_03669;product=murein hydrolase activator EnvC;Dbxref=GO:0000920,GO:0004222,GO:0005886,GO:0009273,GO:0009314,GO:0009410,GO:0016787,GO:0030288,GO:0032153,GO:0042597;gene=envC;Parent=GCA000010485_03669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4942,COG:D,KEGG:K22719,RefSeq:WP_000196261.1,SO:0001217,UniParc:UPI00016A1C1E,UniRef:UniRef100_A0A0A2RXW7,UniRef:UniRef50_P37690,UniRef:UniRef90_P37690
contig_1	Pyrodigal	gene	3743834	3744793	.	+	.	ID=GCA000010485_03670_gene;locus_tag=GCA000010485_03670;gene=yibQ
contig_1	Pyrodigal	CDS	3743834	3744793	.	+	0	ID=GCA000010485_03670;Name=putative protein YibQ;locus_tag=GCA000010485_03670;product=putative protein YibQ;Dbxref=GO:0005975;gene=yibQ;Parent=GCA000010485_03670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2861,COG:G,KEGG:K09798,RefSeq:WP_000483825.1,SO:0001217,UniParc:UPI0001C22C15,UniRef:UniRef100_A0A061Y7X8,UniRef:UniRef50_P37691,UniRef:UniRef90_P37691
contig_1	Pyrodigal	gene	3744780	3745814	.	-	.	ID=GCA000010485_03671_gene;locus_tag=GCA000010485_03671;gene=waaH
contig_1	Pyrodigal	CDS	3744780	3745814	.	-	0	ID=GCA000010485_03671;Name=UDP-glucuronate:LPS(HepIII) glycosyltransferase;locus_tag=GCA000010485_03671;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;gene=waaH;Parent=GCA000010485_03671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000982115,KEGG:K19354,RefSeq:WP_000982097.1,SO:0001217,UniParc:UPI0001C22C16,UniRef:UniRef100_A0A061YG10,UniRef:UniRef50_P11290,UniRef:UniRef90_A0A0H0M9A5;ec_number=2.4.1.17
contig_1	Pyrodigal	gene	3746053	3747078	.	-	.	ID=GCA000010485_03672_gene;locus_tag=GCA000010485_03672;gene=tdh
contig_1	Pyrodigal	CDS	3746053	3747078	.	-	0	ID=GCA000010485_03672;Name=L-threonine 3-dehydrogenase;locus_tag=GCA000010485_03672;product=L-threonine 3-dehydrogenase;Dbxref=GO:0005737,GO:0006567,GO:0008270,GO:0008743,GO:0019518;gene=tdh;Parent=GCA000010485_03672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000646014.1,SO:0001217,UniParc:UPI000000E765,UniRef:UniRef100_B7L742,UniRef:UniRef50_P07913,UniRef:UniRef90_P07913;ec_number=1.1.1.103
contig_1	Pyrodigal	gene	3747088	3748284	.	-	.	ID=GCA000010485_03673_gene;locus_tag=GCA000010485_03673;gene=kbl
contig_1	Pyrodigal	CDS	3747088	3748284	.	-	0	ID=GCA000010485_03673;Name=glycine C-acetyltransferase;locus_tag=GCA000010485_03673;product=glycine C-acetyltransferase;Dbxref=GO:0005829,GO:0006567,GO:0008890,GO:0009058,GO:0019518,GO:0030170;gene=kbl;Parent=GCA000010485_03673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_001213854.1,SO:0001217,UniParc:UPI0001C22C17,UniRef:UniRef100_A0A061KEJ7,UniRef:UniRef50_P0AB77,UniRef:UniRef90_P0AB77;ec_number=2.3.1.29
contig_1	Pyrodigal	gene	3748498	3749430	.	+	.	ID=GCA000010485_03674_gene;locus_tag=GCA000010485_03674;gene=rfaD
contig_1	Pyrodigal	CDS	3748498	3749430	.	+	0	ID=GCA000010485_03674;Name=ADP-glyceromanno-heptose 6-epimerase;locus_tag=GCA000010485_03674;product=ADP-glyceromanno-heptose 6-epimerase;Dbxref=GO:0005975,GO:0008712,GO:0050661,GO:0097171;gene=rfaD;Parent=GCA000010485_03674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,KEGG:K03274,RefSeq:WP_000587750.1,SO:0001217,UniParc:UPI000000E767,UniRef:UniRef100_B7MFI2,UniRef:UniRef50_P67910,UniRef:UniRef90_P67910;ec_number=5.1.3.20
contig_1	Pyrodigal	gene	3749440	3750486	.	+	.	ID=GCA000010485_03675_gene;locus_tag=GCA000010485_03675;gene=rfaF
contig_1	Pyrodigal	CDS	3749440	3750486	.	+	0	ID=GCA000010485_03675;Name=ADP-heptose--LPS heptosyltransferase RfaF;locus_tag=GCA000010485_03675;product=ADP-heptose--LPS heptosyltransferase RfaF;Dbxref=GO:0005829,GO:0008713,GO:0009103,GO:0009244,GO:0016757;gene=rfaF;Parent=GCA000010485_03675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,KEGG:K02843,RefSeq:WP_000699228.1,SO:0001217,UniParc:UPI000000E768,UniRef:UniRef100_I7AU21,UniRef:UniRef50_P37692,UniRef:UniRef90_P37692;ec_number=2.4.99.24
contig_1	Pyrodigal	gene	3750490	3751449	.	+	.	ID=GCA000010485_03676_gene;locus_tag=GCA000010485_03676;gene=rfaC
contig_1	Pyrodigal	CDS	3750490	3751449	.	+	0	ID=GCA000010485_03676;Name=lipopolysaccharide heptosyltransferase RfaC;locus_tag=GCA000010485_03676;product=lipopolysaccharide heptosyltransferase RfaC;Dbxref=GO:0005829,GO:0005886,GO:0008713,GO:0008920,GO:0009244;gene=rfaC;Parent=GCA000010485_03676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,KEGG:K02841,RefSeq:WP_001264592.1,SO:0001217,UniParc:UPI0001C22C18,UniRef:UniRef100_I7AXS6,UniRef:UniRef50_P0DX54,UniRef:UniRef90_P0DX54;ec_number=2.4.99.23
contig_1	Pyrodigal	gene	3751459	3752724	.	+	.	ID=GCA000010485_03677_gene;locus_tag=GCA000010485_03677;gene=waaL
contig_1	Pyrodigal	CDS	3751459	3752724	.	+	0	ID=GCA000010485_03677;Name=O-antigen ligase;locus_tag=GCA000010485_03677;product=O-antigen ligase;Dbxref=GO:0005886,GO:0009244,GO:0016757;gene=waaL;Parent=GCA000010485_03677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001395405,RefSeq:WP_000958045.1,SO:0001217,UniParc:UPI0001C22C19,UniRef:UniRef100_I7AXT1,UniRef:UniRef50_P27243,UniRef:UniRef90_P27243;ec_number=2.4.99.26
contig_1	Pyrodigal	gene	3752750	3753823	.	-	.	ID=GCA000010485_03678_gene;locus_tag=GCA000010485_03678;gene=waaU
contig_1	Pyrodigal	CDS	3752750	3753823	.	-	0	ID=GCA000010485_03678;Name=Putative lipopolysaccharide heptosyltransferase 4;locus_tag=GCA000010485_03678;product=Putative lipopolysaccharide heptosyltransferase 4;Dbxref=GO:0005829,GO:0008713,GO:0008917,GO:0009103,GO:0009244,GO:0071968;gene=waaU;Parent=GCA000010485_03678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001236430.1,SO:0001217,UniParc:UPI0001C22C1A,UniRef:UniRef100_I7AXT3,UniRef:UniRef50_P27242,UniRef:UniRef90_P27242;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3753856	3754707	.	-	.	ID=GCA000010485_03679_gene;locus_tag=GCA000010485_03679;gene=waaZ
contig_1	Pyrodigal	CDS	3753856	3754707	.	-	0	ID=GCA000010485_03679;Name=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;locus_tag=GCA000010485_03679;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;gene=waaZ;Parent=GCA000010485_03679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12981,RefSeq:WP_000790284.1,SO:0001217,UniParc:UPI0001C22C1B,UniRef:UniRef100_I7AU32,UniRef:UniRef50_P27241,UniRef:UniRef90_I7AU32;ec_number=2.4.99.15
contig_1	Pyrodigal	gene	3754777	3755475	.	-	.	ID=GCA000010485_03680_gene;locus_tag=GCA000010485_03680;gene=rfaY
contig_1	Pyrodigal	CDS	3754777	3755475	.	-	0	ID=GCA000010485_03680;Name=lipopolysaccharide core heptose(II) kinase RfaY;locus_tag=GCA000010485_03680;product=lipopolysaccharide core heptose(II) kinase RfaY;Dbxref=GO:0005524,GO:0005886,GO:0009244,GO:0016301,GO:0046835;gene=rfaY;Parent=GCA000010485_03680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02850,RefSeq:WP_000615251.1,SO:0001217,UniParc:UPI0001C22C1C,UniRef:UniRef100_I6ZPK2,UniRef:UniRef50_P27240,UniRef:UniRef90_P27240;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	3755493	3756509	.	-	.	ID=GCA000010485_03681_gene;locus_tag=GCA000010485_03681;gene=rfaJ
contig_1	Pyrodigal	CDS	3755493	3756509	.	-	0	ID=GCA000010485_03681;Name=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;locus_tag=GCA000010485_03681;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;gene=rfaJ;Parent=GCA000010485_03681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000376841,BlastRules:WP_000376865,RefSeq:WP_000376840.1,SO:0001217,UniParc:UPI0001C22C1D,UniRef:UniRef100_I7AK80,UniRef:UniRef50_P27129,UniRef:UniRef90_I7AK80;ec_number=2.4.1.58
contig_1	Pyrodigal	gene	3756549	3757568	.	-	.	ID=GCA000010485_03682_gene;locus_tag=GCA000010485_03682;gene=waaO
contig_1	Pyrodigal	CDS	3756549	3757568	.	-	0	ID=GCA000010485_03682;Name=lipopolysaccharide 3-alpha-galactosyltransferase;locus_tag=GCA000010485_03682;product=lipopolysaccharide 3-alpha-galactosyltransferase;Dbxref=GO:0008918,GO:0009103,GO:0009244,GO:0046872,GO:0047270;gene=waaO;Parent=GCA000010485_03682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001188027.1,SO:0001217,UniParc:UPI0001C22C1E,UniRef:UniRef100_I7A075,UniRef:UniRef50_P27128,UniRef:UniRef90_P27128;ec_number=2.4.1.73
contig_1	Pyrodigal	gene	3757568	3758647	.	-	.	ID=GCA000010485_03683_gene;locus_tag=GCA000010485_03683;gene=waaB
contig_1	Pyrodigal	CDS	3757568	3758647	.	-	0	ID=GCA000010485_03683;Name=lipopolysaccharide 1%2C6-galactosyltransferase;locus_tag=GCA000010485_03683;product=lipopolysaccharide 1%2C6-galactosyltransferase;Dbxref=GO:0005829,GO:0008921,GO:0009244,GO:0016757;gene=waaB;Parent=GCA000010485_03683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02840,RefSeq:WP_000683970.1,SO:0001217,UniParc:UPI0001C22C1F,UniRef:UniRef100_A0A066T2K7,UniRef:UniRef50_P27127,UniRef:UniRef90_P27127;ec_number=2.4.1.44
contig_1	Pyrodigal	gene	3758691	3759626	.	-	.	ID=GCA000010485_03684_gene;locus_tag=GCA000010485_03684;gene=rfaS
contig_1	Pyrodigal	CDS	3758691	3759626	.	-	0	ID=GCA000010485_03684;Name=LPS core biosynthesis protein RfaS;locus_tag=GCA000010485_03684;product=LPS core biosynthesis protein RfaS;gene=rfaS;Parent=GCA000010485_03684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000158225,KEGG:K12986,RefSeq:WP_000158223.1,SO:0001217,UniParc:UPI0001C22C20,UniRef:UniRef100_I7A078,UniRef:UniRef50_P27126,UniRef:UniRef90_I7A078;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3759663	3760460	.	-	.	ID=GCA000010485_03685_gene;locus_tag=GCA000010485_03685;gene=rfaP
contig_1	Pyrodigal	CDS	3759663	3760460	.	-	0	ID=GCA000010485_03685;Name=lipopolysaccharide core heptose(I) kinase RfaP;locus_tag=GCA000010485_03685;product=lipopolysaccharide core heptose(I) kinase RfaP;Dbxref=GO:0009103,GO:0016301;gene=rfaP;Parent=GCA000010485_03685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02848,RefSeq:WP_001296529.1,SO:0001217,UniParc:UPI0001C22C21,UniRef:UniRef100_I6ZPJ9,UniRef:UniRef50_Q9HUF7,UniRef:UniRef90_I6ZPJ9;ec_number=2.7.1.235
contig_1	Pyrodigal	gene	3760453	3761577	.	-	.	ID=GCA000010485_03686_gene;locus_tag=GCA000010485_03686;gene=waaG
contig_1	Pyrodigal	CDS	3760453	3761577	.	-	0	ID=GCA000010485_03686;Name=Lipopolysaccharide glucosyltransferase WaaG;locus_tag=GCA000010485_03686;product=Lipopolysaccharide glucosyltransferase WaaG;Dbxref=GO:0005886,GO:0008919,GO:0009244,GO:0016757;gene=waaG;Parent=GCA000010485_03686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,KEGG:K02844,RefSeq:WP_000634259.1,SO:0001217,UniParc:UPI00000B1228,UniRef:UniRef100_Q8KMX1,UniRef:UniRef50_P25740,UniRef:UniRef90_P25740;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3761574	3762632	.	-	.	ID=GCA000010485_03687_gene;locus_tag=GCA000010485_03687;gene=rfaQ
contig_1	Pyrodigal	CDS	3761574	3762632	.	-	0	ID=GCA000010485_03687;Name=lipopolysaccharide core heptosyltransferase RfaQ;locus_tag=GCA000010485_03687;product=lipopolysaccharide core heptosyltransferase RfaQ;Dbxref=GO:0005829,GO:0008713,GO:0009244,GO:0016757;gene=rfaQ;Parent=GCA000010485_03687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_000360408.1,SO:0001217,UniParc:UPI000209C74B,UniRef:UniRef100_A0A1U9TWU9,UniRef:UniRef50_Q9R9D5,UniRef:UniRef90_Q9R9D5;ec_number=2.4.99.25
contig_1	Infernal	regulatory_region	3762682	3762720	1.6e-11	-	.	ID=EFPPCJGBKI_320;Name=JUMPstart RNA;product=JUMPstart RNA;Dbxref=RFAM:RF01707;inference=profile:Rfam:RF01707;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	3763046	3764323	.	+	.	ID=GCA000010485_03688_gene;locus_tag=GCA000010485_03688;gene=waaA
contig_1	Pyrodigal	CDS	3763046	3764323	.	+	0	ID=GCA000010485_03688;Name=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;locus_tag=GCA000010485_03688;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;Dbxref=GO:0005886,GO:0009244,GO:0009245,GO:0016020,GO:0016740,GO:0036104,GO:0043842;gene=waaA;Parent=GCA000010485_03688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1519,COG:M,KEGG:K02527,RefSeq:WP_000891564.1,SO:0001217,UniParc:UPI0000001B60,UniRef:UniRef100_P0AC75,UniRef:UniRef50_P0AC75,UniRef:UniRef90_P0AC75;ec_number=2.4.99.13
contig_1	Pyrodigal	gene	3764331	3764810	.	+	.	ID=GCA000010485_03689_gene;locus_tag=GCA000010485_03689;gene=coaD
contig_1	Pyrodigal	CDS	3764331	3764810	.	+	0	ID=GCA000010485_03689;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000010485_03689;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000010485_03689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_001171854.1,SO:0001217,UniParc:UPI0001C22C24,UniRef:UniRef100_A0A066T281,UniRef:UniRef50_P0A6I6,UniRef:UniRef90_P0A6I6;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	3764849	3765658	.	-	.	ID=GCA000010485_03690_gene;locus_tag=GCA000010485_03690;gene=mutM
contig_1	Pyrodigal	CDS	3764849	3765658	.	-	0	ID=GCA000010485_03690;Name=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;locus_tag=GCA000010485_03690;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;Dbxref=GO:0003676,GO:0003684,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0016799,GO:0019104,GO:0034039,GO:0140078;gene=mutM;Parent=GCA000010485_03690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K10563,RefSeq:WP_001114533.1,SO:0001217,UniParc:UPI000012AB86,UniRef:UniRef100_A7ZTI6,UniRef:UniRef50_P05523,UniRef:UniRef90_P05523;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	3765756	3765923	.	-	.	ID=GCA000010485_03691_gene;locus_tag=GCA000010485_03691;gene=rpmG
contig_1	Pyrodigal	CDS	3765756	3765923	.	-	0	ID=GCA000010485_03691;Name=50S ribosomal protein L33;locus_tag=GCA000010485_03691;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmG;Parent=GCA000010485_03691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001051798.1,SO:0001217,UniParc:UPI000005A6F0,UniRef:UniRef100_A8ARM4,UniRef:UniRef50_Q9HTN9,UniRef:UniRef90_A1JHR4
contig_1	Pyrodigal	gene	3765944	3766180	.	-	.	ID=GCA000010485_03692_gene;locus_tag=GCA000010485_03692;gene=rpmB
contig_1	Pyrodigal	CDS	3765944	3766180	.	-	0	ID=GCA000010485_03692;Name=50S ribosomal protein L28;locus_tag=GCA000010485_03692;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmB;Parent=GCA000010485_03692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_000091955.1,SO:0001217,UniParc:UPI0000163A30,UniRef:UniRef100_P0A7M2,UniRef:UniRef50_P0A7M2,UniRef:UniRef90_P0A7M2
contig_1	Pyrodigal	gene	3766397	3767065	.	-	.	ID=GCA000010485_03693_gene;locus_tag=GCA000010485_03693;gene=radC
contig_1	Pyrodigal	CDS	3766397	3767065	.	-	0	ID=GCA000010485_03693;Name=DNA repair protein RadC;locus_tag=GCA000010485_03693;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281,GO:0006508,GO:0008237,GO:0046872;gene=radC;Parent=GCA000010485_03693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2003,COG:L,RefSeq:WP_001296533.1,SO:0001217,UniParc:UPI00018877CE,UniRef:UniRef100_B7N279,UniRef:UniRef50_P25531,UniRef:UniRef90_P25531
contig_1	Pyrodigal	gene	3767237	3768457	.	+	.	ID=GCA000010485_03694_gene;locus_tag=GCA000010485_03694;gene=coaBC
contig_1	Pyrodigal	CDS	3767237	3768457	.	+	0	ID=GCA000010485_03694;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000010485_03694;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941;gene=coaBC;Parent=GCA000010485_03694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_000050112.1,SO:0001217,UniParc:UPI0001C22CEF,UniRef:UniRef100_A0A066T287,UniRef:UniRef50_Q5E8M6,UniRef:UniRef90_Q329L8;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	3768435	3768893	.	+	.	ID=GCA000010485_03695_gene;locus_tag=GCA000010485_03695;gene=dut
contig_1	Pyrodigal	CDS	3768435	3768893	.	+	0	ID=GCA000010485_03695;Name=dUTP diphosphatase;locus_tag=GCA000010485_03695;product=dUTP diphosphatase;Dbxref=GO:0000287,GO:0004170,GO:0006226,GO:0046081;gene=dut;Parent=GCA000010485_03695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0756,COG:FV,RefSeq:WP_000976070.1,SO:0001217,UniParc:UPI0000167DF0,UniRef:UniRef100_P64007,UniRef:UniRef50_P06968,UniRef:UniRef90_P64007;ec_number=3.6.1.23
contig_1	Pyrodigal	gene	3769000	3769596	.	+	.	ID=GCA000010485_03696_gene;locus_tag=GCA000010485_03696;gene=slmA
contig_1	Pyrodigal	CDS	3769000	3769596	.	+	0	ID=GCA000010485_03696;Name=nucleoid occlusion factor SlmA;locus_tag=GCA000010485_03696;product=nucleoid occlusion factor SlmA;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0005737,GO:0010974,GO:0043590,GO:0051301;gene=slmA;Parent=GCA000010485_03696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,KEGG:K05501,RefSeq:WP_000818603.1,SO:0001217,UniParc:UPI00005767E7,UniRef:UniRef100_B7UM47,UniRef:UniRef50_P0C093,UniRef:UniRef90_P0C093
contig_1	Pyrodigal	gene	3769633	3770274	.	-	.	ID=GCA000010485_03697_gene;locus_tag=GCA000010485_03697;gene=pyrE
contig_1	Pyrodigal	CDS	3769633	3770274	.	-	0	ID=GCA000010485_03697;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000010485_03697;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0005737,GO:0006207,GO:0044205,GO:0046132;gene=pyrE;Parent=GCA000010485_03697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_000806177.1,SO:0001217,UniParc:UPI00001128D0,UniRef:UniRef100_P0A7E3,UniRef:UniRef50_P0A7E3,UniRef:UniRef90_P0A7E3;ec_number=2.4.2.10
contig_1	Bakta	gene	3770286	3770324	.	-	.	ID=GCA000010485_03698_gene;locus_tag=GCA000010485_03698;inference=ab initio prediction:Bakta;gene=pyrL
contig_1	Bakta	CDS	3770286	3770324	.	-	0	ID=GCA000010485_03698;Name=Putative PyrE leader peptide;locus_tag=GCA000010485_03698;product=Putative PyrE leader peptide;gene=pyrL;Parent=GCA000010485_03698_gene;Note=SO:0001217,UniParc:UPI000013C2E1,UniRef:UniRef100_P17776,UniRef:UniRef50_P17776,UniRef:UniRef90_P17776
contig_1	Pyrodigal	gene	3770340	3771056	.	-	.	ID=GCA000010485_03699_gene;locus_tag=GCA000010485_03699;gene=rph
contig_1	Pyrodigal	CDS	3770340	3771056	.	-	0	ID=GCA000010485_03699;Name=ribonuclease PH;locus_tag=GCA000010485_03699;product=ribonuclease PH;Dbxref=GO:0000049,GO:0000175,GO:0006364,GO:0008033,GO:0009022,GO:0016075;gene=rph;Parent=GCA000010485_03699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0689,COG:J,KEGG:K00989,RefSeq:WP_001247093.1,SO:0001217,UniParc:UPI0000134458,UniRef:UniRef100_A7ZTJ4,UniRef:UniRef50_P0CG19,UniRef:UniRef90_P0CG19;ec_number=2.7.7.56
contig_1	Pyrodigal	gene	3771183	3772046	.	+	.	ID=GCA000010485_03700_gene;locus_tag=GCA000010485_03700;gene=yicC
contig_1	Pyrodigal	CDS	3771183	3772046	.	+	0	ID=GCA000010485_03700;Name=putative endoribonuclease YicC;locus_tag=GCA000010485_03700;product=putative endoribonuclease YicC;Dbxref=GO:0004521;gene=yicC;Parent=GCA000010485_03700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1561,COG:J,RefSeq:WP_000621332.1,SO:0001217,UniParc:UPI0000D50D99,UniRef:UniRef100_A0A0H3EQK2,UniRef:UniRef50_P23839,UniRef:UniRef90_P23839;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	3772298	3772915	.	+	.	ID=GCA000010485_03701_gene;locus_tag=GCA000010485_03701;gene=yicG
contig_1	Pyrodigal	CDS	3772298	3772915	.	+	0	ID=GCA000010485_03701;Name=UPF0126 inner membrane protein YicG;locus_tag=GCA000010485_03701;product=UPF0126 inner membrane protein YicG;Dbxref=GO:0005886;gene=yicG;Parent=GCA000010485_03701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2860,COG:P,RefSeq:WP_000924289.1,SO:0001217,UniParc:UPI000013B397,UniRef:UniRef100_P0AGM2,UniRef:UniRef50_P0AGM2,UniRef:UniRef90_P0AGM2
contig_1	Pyrodigal	gene	3772912	3774594	.	-	.	ID=GCA000010485_03702_gene;locus_tag=GCA000010485_03702;gene=ligB
contig_1	Pyrodigal	CDS	3772912	3774594	.	-	0	ID=GCA000010485_03702;Name=NAD-dependent DNA ligase LigB;locus_tag=GCA000010485_03702;product=NAD-dependent DNA ligase LigB;Dbxref=GO:0003911,GO:0006260,GO:0006281;gene=ligB;Parent=GCA000010485_03702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296534.1,SO:0001217,UniParc:UPI0001E8CE7F,UniRef:UniRef100_A0A066TAS0,UniRef:UniRef50_P25772,UniRef:UniRef90_P25772;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	3774852	3775475	.	+	.	ID=GCA000010485_03703_gene;locus_tag=GCA000010485_03703;gene=gmk
contig_1	Pyrodigal	CDS	3774852	3775475	.	+	0	ID=GCA000010485_03703;Name=guanylate kinase;locus_tag=GCA000010485_03703;product=guanylate kinase;Dbxref=GO:0004385,GO:0005524,GO:0005829,GO:0006163;gene=gmk;Parent=GCA000010485_03703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0194,COG:F,RefSeq:WP_001295237.1,SO:0001217,UniParc:UPI000012DDDD,UniRef:UniRef100_P60546,UniRef:UniRef50_P60546,UniRef:UniRef90_P60546;ec_number=2.7.4.8
contig_1	Pyrodigal	gene	3775530	3775805	.	+	.	ID=GCA000010485_03704_gene;locus_tag=GCA000010485_03704;gene=gmk
contig_1	Pyrodigal	CDS	3775530	3775805	.	+	0	ID=GCA000010485_03704;Name=guanylate kinase;locus_tag=GCA000010485_03704;product=guanylate kinase;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0004385,GO:0006163;gene=gmk;Parent=GCA000010485_03704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_000135058.1,SO:0001217,UniParc:UPI000003EB27,UniRef:UniRef100_A8ARN6,UniRef:UniRef50_P60546,UniRef:UniRef90_A8ARN6;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	3775824	3777932	.	+	.	ID=GCA000010485_03705_gene;locus_tag=GCA000010485_03705;gene=spoT
contig_1	Pyrodigal	CDS	3775824	3777932	.	+	0	ID=GCA000010485_03705;Name=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;locus_tag=GCA000010485_03705;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;Dbxref=GO:0005886,GO:0008728,GO:0008893,GO:0015969,GO:0015970,GO:0042594;gene=spoT;Parent=GCA000010485_03705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,RefSeq:WP_000280473.1,SO:0001217,UniParc:UPI00000E47D5,UniRef:UniRef100_E2QH05,UniRef:UniRef50_P0AG24,UniRef:UniRef90_P0AG24;ec_number=3.1.7.2
contig_1	Pyrodigal	gene	3777939	3778628	.	+	.	ID=GCA000010485_03706_gene;locus_tag=GCA000010485_03706;gene=trmH
contig_1	Pyrodigal	CDS	3777939	3778628	.	+	0	ID=GCA000010485_03706;Name=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;locus_tag=GCA000010485_03706;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;Dbxref=GO:0000049,GO:0002938,GO:0030488,GO:0141100;gene=trmH;Parent=GCA000010485_03706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_001070179.1,SO:0001217,UniParc:UPI00000E47D6,UniRef:UniRef100_E2QH06,UniRef:UniRef50_P0AGJ2,UniRef:UniRef90_P0AGJ2;ec_number=2.1.1.34
contig_1	Pyrodigal	gene	3778634	3780715	.	+	.	ID=GCA000010485_03707_gene;locus_tag=GCA000010485_03707;gene=recG
contig_1	Pyrodigal	CDS	3778634	3780715	.	+	0	ID=GCA000010485_03707;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000010485_03707;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0009314,GO:0009378,GO:0009379,GO:0016853,GO:0016887,GO:0032508,GO:0036121,GO:0061749,GO:0061775,GO:0071932,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000010485_03707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,RefSeq:WP_000678409.1,SO:0001217,UniParc:UPI0001C22CF1,UniRef:UniRef100_A0A3K3UTD0,UniRef:UniRef50_P24230,UniRef:UniRef90_P24230;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3780749	3781954	.	-	.	ID=GCA000010485_03708_gene;locus_tag=GCA000010485_03708;gene=gltS
contig_1	Pyrodigal	CDS	3780749	3781954	.	-	0	ID=GCA000010485_03708;Name=sodium/glutamate symporter;locus_tag=GCA000010485_03708;product=sodium/glutamate symporter;Dbxref=GO:0005886,GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA000010485_03708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,RefSeq:WP_000468826.1,SO:0001217,UniParc:UPI0000D50D9D,UniRef:UniRef100_A0A061KIT2,UniRef:UniRef50_P0AER8,UniRef:UniRef90_P0AER8
contig_1	Pyrodigal	gene	3782234	3783625	.	+	.	ID=GCA000010485_03709_gene;locus_tag=GCA000010485_03709;gene=xanP
contig_1	Pyrodigal	CDS	3782234	3783625	.	+	0	ID=GCA000010485_03709;Name=xanthine/proton symporter XanP;locus_tag=GCA000010485_03709;product=xanthine/proton symporter XanP;Dbxref=GO:0005886,GO:0042907;gene=xanP;Parent=GCA000010485_03709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295238,COG:COG2233,COG:F,KEGG:K16345,RefSeq:WP_001545681.1,SO:0001217,UniParc:UPI0001C22CF2,UniRef:UniRef100_A0A7I0L578,UniRef:UniRef50_P0AGM9,UniRef:UniRef90_P0AGM9
contig_1	Pyrodigal	gene	3783746	3785455	.	+	.	ID=GCA000010485_03710_gene;locus_tag=GCA000010485_03710;gene=yicH
contig_1	Pyrodigal	CDS	3783746	3785455	.	+	0	ID=GCA000010485_03710;Name=AsmA family protein YicH;locus_tag=GCA000010485_03710;product=AsmA family protein YicH;gene=yicH;Parent=GCA000010485_03710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545682.1,SO:0001217,UniParc:UPI0001C22CF3,UniRef:UniRef100_A0A7I0L669,UniRef:UniRef50_P31433,UniRef:UniRef90_P31433
contig_1	Pyrodigal	gene	3785499	3786179	.	-	.	ID=GCA000010485_03711_gene;locus_tag=GCA000010485_03711
contig_1	Pyrodigal	CDS	3785499	3786179	.	-	0	ID=GCA000010485_03711;Name=D-lyxose ketol-isomerase;locus_tag=GCA000010485_03711;product=D-lyxose ketol-isomerase;Parent=GCA000010485_03711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09988,RefSeq:WP_001297961.1,SO:0001217,UniParc:UPI00000439AB,UniRef:UniRef100_A0A152CV53,UniRef:UniRef50_A0A0P8KDV6,UniRef:UniRef90_A0A0H3MMB5;ec_number=5.3.1.15
contig_1	Pyrodigal	gene	3786160	3787092	.	-	.	ID=GCA000010485_03712_gene;locus_tag=GCA000010485_03712
contig_1	Pyrodigal	CDS	3786160	3787092	.	-	0	ID=GCA000010485_03712;Name=ROK family protein;locus_tag=GCA000010485_03712;product=ROK family protein;Parent=GCA000010485_03712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000559091.1,SO:0001217,UniParc:UPI0001F0826F,UniRef:UniRef100_A0A641E5S3,UniRef:UniRef50_A0A0H2VEV2,UniRef:UniRef90_A0A0H2VEV2
contig_1	Pyrodigal	gene	3787140	3788000	.	-	.	ID=GCA000010485_03713_gene;locus_tag=GCA000010485_03713
contig_1	Pyrodigal	CDS	3787140	3788000	.	-	0	ID=GCA000010485_03713;Name=Class II ketose-1%2C6-biphosphate aldolase;locus_tag=GCA000010485_03713;product=Class II ketose-1%2C6-biphosphate aldolase;Parent=GCA000010485_03713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01624,RefSeq:WP_000961376.1,SO:0001217,UniParc:UPI0001C22CF5,UniRef:UniRef100_A0A641BM76,UniRef:UniRef50_C5J5A7,UniRef:UniRef90_C5J5A7;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	3788081	3788932	.	-	.	ID=GCA000010485_03714_gene;locus_tag=GCA000010485_03714
contig_1	Pyrodigal	CDS	3788081	3788932	.	-	0	ID=GCA000010485_03714;Name=Class II fructose-bisphosphate aldolase family protein;locus_tag=GCA000010485_03714;product=Class II fructose-bisphosphate aldolase family protein;Parent=GCA000010485_03714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000457121.1,SO:0001217,UniParc:UPI0001C22CF6,UniRef:UniRef100_A0A7I0KWL4,UniRef:UniRef50_A0A234PP34,UniRef:UniRef90_A0A234PP34
contig_1	Pyrodigal	gene	3788944	3790035	.	-	.	ID=GCA000010485_03715_gene;locus_tag=GCA000010485_03715;gene=frwC
contig_1	Pyrodigal	CDS	3788944	3790035	.	-	0	ID=GCA000010485_03715;Name=PTS EIIC type-2 domain-containing protein;locus_tag=GCA000010485_03715;product=PTS EIIC type-2 domain-containing protein;gene=frwC;Parent=GCA000010485_03715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,RefSeq:WP_000654324.1,SO:0001217,UniParc:UPI000187BE42,UniRef:UniRef100_E2QH15,UniRef:UniRef50_A0A366EE17,UniRef:UniRef90_A0A1C4BX33
contig_1	Pyrodigal	gene	3790060	3790374	.	-	.	ID=GCA000010485_03716_gene;locus_tag=GCA000010485_03716;gene=frwB
contig_1	Pyrodigal	CDS	3790060	3790374	.	-	0	ID=GCA000010485_03716;Name=protein-N(pi)-phosphohistidine--D-fructose phosphotransferase;locus_tag=GCA000010485_03716;product=protein-N(pi)-phosphohistidine--D-fructose phosphotransferase;gene=frwB;Parent=GCA000010485_03716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1445,COG:G,RefSeq:WP_001028073.1,SO:0001217,UniParc:UPI00000DF230,UniRef:UniRef100_C5J5A4,UniRef:UniRef50_W9BGZ1,UniRef:UniRef90_C5J5A4
contig_1	Pyrodigal	gene	3790392	3790862	.	-	.	ID=GCA000010485_03717_gene;locus_tag=GCA000010485_03717
contig_1	Pyrodigal	CDS	3790392	3790862	.	-	0	ID=GCA000010485_03717;Name=Fructose PTS transporter subunit IIA;locus_tag=GCA000010485_03717;product=Fructose PTS transporter subunit IIA;Parent=GCA000010485_03717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000355546.1,SO:0001217,UniParc:UPI00000DF231,UniRef:UniRef100_E2QH17,UniRef:UniRef50_E2QH17,UniRef:UniRef90_E2QH17
contig_1	Pyrodigal	gene	3790889	3792442	.	-	.	ID=GCA000010485_03718_gene;locus_tag=GCA000010485_03718
contig_1	Pyrodigal	CDS	3790889	3792442	.	-	0	ID=GCA000010485_03718;Name=PRD domain-containing protein;locus_tag=GCA000010485_03718;product=PRD domain-containing protein;Parent=GCA000010485_03718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545683.1,SO:0001217,UniParc:UPI0001C22CF7,UniRef:UniRef100_A0A7I0KWJ3,UniRef:UniRef50_A0A1B7L3T2,UniRef:UniRef90_A0A3R0MJQ5
contig_1	Pyrodigal	gene	3792737	3795055	.	-	.	ID=GCA000010485_03719_gene;locus_tag=GCA000010485_03719;gene=yicI
contig_1	Pyrodigal	CDS	3792737	3795055	.	-	0	ID=GCA000010485_03719;Name=alpha-xylosidase;locus_tag=GCA000010485_03719;product=alpha-xylosidase;Dbxref=GO:0004553,GO:0005975,GO:0030246,GO:0042802,GO:0061634,GO:0080176;gene=yicI;Parent=GCA000010485_03719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000702976.1,SO:0001217,UniParc:UPI0001C22CF8,UniRef:UniRef100_A0A7I0L567,UniRef:UniRef50_P31434,UniRef:UniRef90_P31434;ec_number=3.2.1.177
contig_1	Pyrodigal	gene	3795065	3796447	.	-	.	ID=GCA000010485_03720_gene;locus_tag=GCA000010485_03720;gene=yicJ
contig_1	Pyrodigal	CDS	3795065	3796447	.	-	0	ID=GCA000010485_03720;Name=glycoside-pentoside-hexuronide family transporter;locus_tag=GCA000010485_03720;product=glycoside-pentoside-hexuronide family transporter;Dbxref=GO:0005886,GO:0006814,GO:0008643,GO:0015293,GO:0016020,GO:0055085;gene=yicJ;Parent=GCA000010485_03720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000834418.1,SO:0001217,UniParc:UPI00016088ED,UniRef:UniRef100_A0A061LN17,UniRef:UniRef50_P31435,UniRef:UniRef90_P31435
contig_1	tRNAscan-SE	gene	3796740	3796834	.	+	.	ID=GCA000010485_03721_gene;locus_tag=GCA000010485_03721;gene=trnU
contig_1	tRNAscan-SE	tRNA	3796740	3796834	.	+	.	ID=GCA000010485_03721;Name=tRNA-SeC(tca);locus_tag=GCA000010485_03721;product=tRNA-SeC(tca);gene=trnU;anti_codon=tca;amino_acid=SeC;Parent=GCA000010485_03721_gene;inference=profile:tRNAscan:2.0;Note=SO:0005857
contig_1	Pyrodigal	gene	3796887	3797924	.	+	.	ID=GCA000010485_03722_gene;locus_tag=GCA000010485_03722
contig_1	Pyrodigal	CDS	3796887	3797924	.	+	0	ID=GCA000010485_03722;Name=Cytoplasmic protein;locus_tag=GCA000010485_03722;product=Cytoplasmic protein;Parent=GCA000010485_03722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001280586.1,SO:0001217,UniParc:UPI0000043B5A,UniRef:UniRef100_Q1AP19,UniRef:UniRef50_D2C2Q2,UniRef:UniRef90_A0A0H3ERD7
contig_1	Pyrodigal	gene	3798494	3798991	.	+	.	ID=GCA000010485_03723_gene;locus_tag=GCA000010485_03723
contig_1	Pyrodigal	CDS	3798494	3798991	.	+	0	ID=GCA000010485_03723;Name=hypothetical protein;locus_tag=GCA000010485_03723;product=hypothetical protein;Parent=GCA000010485_03723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000509815.1,SO:0001217,UniParc:UPI0001C22CF9,UniRef:UniRef100_A0A061KE38,UniRef:UniRef50_B7LVM2,UniRef:UniRef90_B7LVM2
contig_1	Pyrodigal	gene	3799169	3800092	.	+	.	ID=GCA000010485_03724_gene;locus_tag=GCA000010485_03724;gene=yicL
contig_1	Pyrodigal	CDS	3799169	3800092	.	+	0	ID=GCA000010485_03724;Name=carboxylate/amino acid/amine transporter;locus_tag=GCA000010485_03724;product=carboxylate/amino acid/amine transporter;Dbxref=GO:0005886,GO:0016020;gene=yicL;Parent=GCA000010485_03724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_000535950.1,SO:0001217,UniParc:UPI000170F0F3,UniRef:UniRef100_E2QH24,UniRef:UniRef50_P31437,UniRef:UniRef90_P31437
contig_1	Pyrodigal	gene	3800096	3800914	.	-	.	ID=GCA000010485_03725_gene;locus_tag=GCA000010485_03725;gene=nlpA
contig_1	Pyrodigal	CDS	3800096	3800914	.	-	0	ID=GCA000010485_03725;Name=lipoprotein NlpA;locus_tag=GCA000010485_03725;product=lipoprotein NlpA;Dbxref=GO:0005886,GO:0015821;gene=nlpA;Parent=GCA000010485_03725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_000779409.1,SO:0001217,UniParc:UPI00000E4A98,UniRef:UniRef100_Q5I3I2,UniRef:UniRef50_P04846,UniRef:UniRef90_P04846
contig_1	Pyrodigal	gene	3801136	3801429	.	+	.	ID=GCA000010485_03726_gene;locus_tag=GCA000010485_03726;gene=yicS
contig_1	Pyrodigal	CDS	3801136	3801429	.	+	0	ID=GCA000010485_03726;Name=putative protein YicS;locus_tag=GCA000010485_03726;product=putative protein YicS;gene=yicS;Parent=GCA000010485_03726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296563.1,SO:0001217,UniParc:UPI0001C22CFA,UniRef:UniRef100_A0A8S0FDF1,UniRef:UniRef50_Q8X4C9,UniRef:UniRef90_Q8X4C9
contig_1	Pyrodigal	gene	3801470	3802708	.	-	.	ID=GCA000010485_03727_gene;locus_tag=GCA000010485_03727;gene=nepI
contig_1	Pyrodigal	CDS	3801470	3802708	.	-	0	ID=GCA000010485_03727;Name=purine ribonucleoside efflux pump NepI;locus_tag=GCA000010485_03727;product=purine ribonucleoside efflux pump NepI;Dbxref=GO:0005886,GO:0015211,GO:0015297,GO:0015860,GO:0016020;gene=nepI;Parent=GCA000010485_03727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03445,SO:0001217,UniParc:UPI0001C22CFB,UniRef:UniRef100_A0A061KEJ8,UniRef:UniRef50_P0ADL1,UniRef:UniRef90_Q8XC49
contig_1	Pyrodigal	gene	3802888	3803247	.	+	.	ID=GCA000010485_03728_gene;locus_tag=GCA000010485_03728
contig_1	Pyrodigal	CDS	3802888	3803247	.	+	0	ID=GCA000010485_03728;Name=Type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA000010485_03728;product=Type II toxin-antitoxin system RelE/ParE family toxin;Parent=GCA000010485_03728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4737,COG:S,SO:0001217,UniParc:UPI0001C22CFC,UniRef:UniRef100_A0A066TAW8,UniRef:UniRef50_A0A4C2Z2M1,UniRef:UniRef90_A0A4C2Z2M1
contig_1	Pyrodigal	gene	3803231	3803554	.	+	.	ID=GCA000010485_03729_gene;locus_tag=GCA000010485_03729;gene=yiaG
contig_1	Pyrodigal	CDS	3803231	3803554	.	+	0	ID=GCA000010485_03729;Name=DNA-binding protein;locus_tag=GCA000010485_03729;product=DNA-binding protein;gene=yiaG;Parent=GCA000010485_03729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2944,COG:K,RefSeq:WP_000125640.1,SO:0001217,UniParc:UPI0001C22CFD,UniRef:UniRef100_A0A066TB35,UniRef:UniRef50_C5BBX7,UniRef:UniRef90_A0AAV3H1D2
contig_1	Pyrodigal	gene	3803670	3804122	.	-	.	ID=GCA000010485_03730_gene;locus_tag=GCA000010485_03730;gene=yicN
contig_1	Pyrodigal	CDS	3803670	3804122	.	-	0	ID=GCA000010485_03730;Name=putative protein YicN;locus_tag=GCA000010485_03730;product=putative protein YicN;gene=yicN;Parent=GCA000010485_03730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295241.1,SO:0001217,UniParc:UPI0000683E99,UniRef:UniRef100_P0ADL3,UniRef:UniRef50_P0ADL3,UniRef:UniRef90_P0ADL3
contig_1	Pyrodigal	gene	3804175	3805509	.	-	.	ID=GCA000010485_03731_gene;locus_tag=GCA000010485_03731;gene=adeQ
contig_1	Pyrodigal	CDS	3804175	3805509	.	-	0	ID=GCA000010485_03731;Name=adenine permease AdeQ;locus_tag=GCA000010485_03731;product=adenine permease AdeQ;Dbxref=GO:0005886,GO:0015207,GO:0015853;gene=adeQ;Parent=GCA000010485_03731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001403836,KEGG:K06901,RefSeq:WP_001527950.1,SO:0001217,UniParc:UPI0002A38B00,UniRef:UniRef100_A0A1Y5C7F6,UniRef:UniRef50_P31466,UniRef:UniRef90_P31440
contig_1	Pyrodigal	gene	3805684	3807450	.	+	.	ID=GCA000010485_03732_gene;locus_tag=GCA000010485_03732;gene=adeD
contig_1	Pyrodigal	CDS	3805684	3807450	.	+	0	ID=GCA000010485_03732;Name=adenine deaminase;locus_tag=GCA000010485_03732;product=adenine deaminase;Dbxref=GO:0000034,GO:0006146;gene=adeD;Parent=GCA000010485_03732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1001,COG:F,KEGG:K01486,RefSeq:WP_001065681.1,SO:0001217,UniParc:UPI00005EF484,UniRef:UniRef100_B7N1X4,UniRef:UniRef50_P31441,UniRef:UniRef90_P31441;ec_number=3.5.4.2
contig_1	Pyrodigal	gene	3807508	3808887	.	-	.	ID=GCA000010485_03733_gene;locus_tag=GCA000010485_03733;gene=uhpT
contig_1	Pyrodigal	CDS	3807508	3808887	.	-	0	ID=GCA000010485_03733;Name=hexose-6-phosphate:phosphate antiporter;locus_tag=GCA000010485_03733;product=hexose-6-phosphate:phosphate antiporter;Dbxref=GO:0005886,GO:0022857,GO:0035435,GO:0055085,GO:0061513;gene=uhpT;Parent=GCA000010485_03733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K07784,SO:0001217,UniRef:UniRef50_P0AGC0,UniRef:UniRef90_P0AGC0
contig_1	Pyrodigal	gene	3809025	3810344	.	-	.	ID=GCA000010485_03734_gene;locus_tag=GCA000010485_03734;gene=uhpC
contig_1	Pyrodigal	CDS	3809025	3810344	.	-	0	ID=GCA000010485_03734;Name=MFS transporter family glucose-6-phosphate receptor UhpC;locus_tag=GCA000010485_03734;product=MFS transporter family glucose-6-phosphate receptor UhpC;Dbxref=GO:0005886,GO:0015760,GO:0035435,GO:0061513;gene=uhpC;Parent=GCA000010485_03734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000936566,RefSeq:WP_001296565.1,SO:0001217,UniParc:UPI0001E8A061,UniRef:UniRef100_A0A061Y4Y6,UniRef:UniRef50_P09836,UniRef:UniRef90_P27669
contig_1	Pyrodigal	gene	3810354	3811856	.	-	.	ID=GCA000010485_03735_gene;locus_tag=GCA000010485_03735;gene=uhpB
contig_1	Pyrodigal	CDS	3810354	3811856	.	-	0	ID=GCA000010485_03735;Name=signal transduction histidine-protein kinase/phosphatase UhpB;locus_tag=GCA000010485_03735;product=signal transduction histidine-protein kinase/phosphatase UhpB;Dbxref=GO:0000155,GO:0000160;gene=uhpB;Parent=GCA000010485_03735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001304997.1,SO:0001217,UniParc:UPI00019F345D,UniRef:UniRef100_A0A061KJ39,UniRef:UniRef50_P09835,UniRef:UniRef90_A0A2B7MRG7;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3811856	3812446	.	-	.	ID=GCA000010485_03736_gene;locus_tag=GCA000010485_03736;gene=uhpA
contig_1	Pyrodigal	CDS	3811856	3812446	.	-	0	ID=GCA000010485_03736;Name=DNA-binding response regulator UhpA;locus_tag=GCA000010485_03736;product=DNA-binding response regulator UhpA;Dbxref=GO:0000160,GO:0000287,GO:0003677,GO:0003984,GO:0005737,GO:0006355,GO:0009082,GO:0030976,GO:0050660;gene=uhpA;Parent=GCA000010485_03736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01652,RefSeq:WP_000633668.1,SO:0001217,UniParc:UPI0000137B19,UniRef:UniRef100_P0AGA6,UniRef:UniRef50_P0AGA6,UniRef:UniRef90_P0AGA6;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3812930	3813790	.	+	.	ID=GCA000010485_03737_gene;locus_tag=GCA000010485_03737
contig_1	Pyrodigal	CDS	3812930	3813790	.	+	0	ID=GCA000010485_03737;Name=DUF6708 domain-containing protein;locus_tag=GCA000010485_03737;product=DUF6708 domain-containing protein;Parent=GCA000010485_03737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000556883.1,SO:0001217,UniParc:UPI0001C22DA2,UniRef:UniRef100_A0A641E3V5,UniRef:UniRef50_A0A0V9HWF7,UniRef:UniRef90_A0A0V9HWF7
contig_1	Pyrodigal	gene	3813856	3814146	.	-	.	ID=GCA000010485_03738_gene;locus_tag=GCA000010485_03738;gene=ilvN
contig_1	Pyrodigal	CDS	3813856	3814146	.	-	0	ID=GCA000010485_03738;Name=acetolactate synthase small subunit;locus_tag=GCA000010485_03738;product=acetolactate synthase small subunit;Dbxref=GO:0003984,GO:0005829,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:1990610;gene=ilvN;Parent=GCA000010485_03738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01653,RefSeq:WP_001181706.1,SO:0001217,UniParc:UPI000003EB0C,UniRef:UniRef100_P0ADF8,UniRef:UniRef50_P0ADF8,UniRef:UniRef90_P0ADF8;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3814150	3815838	.	-	.	ID=GCA000010485_03739_gene;locus_tag=GCA000010485_03739;gene=ilvB
contig_1	Pyrodigal	CDS	3814150	3815838	.	-	0	ID=GCA000010485_03739;Name=acetolactate synthase large subunit;locus_tag=GCA000010485_03739;product=acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvB;Parent=GCA000010485_03739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,RefSeq:WP_000168502.1,SO:0001217,UniParc:UPI0001C22DA3,UniRef:UniRef100_A0A061KE20,UniRef:UniRef50_P08142,UniRef:UniRef90_P08142;ec_number=2.2.1.6
contig_1	Bakta	gene	3816287	3816361	.	-	.	ID=GCA000010485_03740_gene;locus_tag=GCA000010485_03740;inference=ab initio prediction:Bakta;gene=ysdE
contig_1	Bakta	CDS	3816287	3816361	.	-	0	ID=GCA000010485_03740;Name=Protein YsdE;locus_tag=GCA000010485_03740;product=Protein YsdE;gene=ysdE;Parent=GCA000010485_03740_gene;Note=RefSeq:WP_211180519.1,SO:0001217,UniParc:UPI00107E6401,UniRef:UniRef100_P0DSH6,UniRef:UniRef50_P0DSH6,UniRef:UniRef90_P0DSH6
contig_1	Pyrodigal	gene	3816443	3817627	.	+	.	ID=GCA000010485_03741_gene;locus_tag=GCA000010485_03741;gene=emrD
contig_1	Pyrodigal	CDS	3816443	3817627	.	+	0	ID=GCA000010485_03741;Name=multidrug efflux MFS transporter EmrD;locus_tag=GCA000010485_03741;product=multidrug efflux MFS transporter EmrD;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0042908,GO:0042910,GO:1990961;gene=emrD;Parent=GCA000010485_03741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000828740,BlastRules:WP_000828746,BlastRules:WP_115740452,COG:COG2814,COG:G,KEGG:K08154,NCBIProtein:BAE77620.1,RefSeq:WP_024210484.1,SO:0001217,UniParc:UPI0003EF253A,UniRef:UniRef100_UPI0003EF253A,UniRef:UniRef50_P31442,UniRef:UniRef90_P31442
contig_1	Pyrodigal	gene	3817635	3818132	.	-	.	ID=GCA000010485_03742_gene;locus_tag=GCA000010485_03742;gene=aslB
contig_1	Pyrodigal	CDS	3817635	3818132	.	-	0	ID=GCA000010485_03742;Name=Anaerobic sulfatase-maturating enzyme;locus_tag=GCA000010485_03742;product=Anaerobic sulfatase-maturating enzyme;gene=aslB;Parent=GCA000010485_03742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0641,COG:O,RefSeq:WP_000148034.1,SO:0001217,UniParc:UPI00005EF480,UniRef:UniRef100_A0A066T6R1,UniRef:UniRef50_J7QIM3,UniRef:UniRef90_J7QIM3
contig_1	Pyrodigal	gene	3818129	3818491	.	-	.	ID=GCA000010485_03743_gene;locus_tag=GCA000010485_03743;gene=yidG
contig_1	Pyrodigal	CDS	3818129	3818491	.	-	0	ID=GCA000010485_03743;Name=Inner membrane protein YidG;locus_tag=GCA000010485_03743;product=Inner membrane protein YidG;Dbxref=GO:0005886;gene=yidG;Parent=GCA000010485_03743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00389,RefSeq:WP_001113432.1,SO:0001217,UniParc:UPI000013B3B1,UniRef:UniRef100_P0ADL6,UniRef:UniRef50_P0ADL6,UniRef:UniRef90_P0ADL6
contig_1	Pyrodigal	gene	3818481	3818828	.	-	.	ID=GCA000010485_03744_gene;locus_tag=GCA000010485_03744;gene=yidH
contig_1	Pyrodigal	CDS	3818481	3818828	.	-	0	ID=GCA000010485_03744;Name=Inner membrane protein YidH;locus_tag=GCA000010485_03744;product=Inner membrane protein YidH;Dbxref=GO:0005886;gene=yidH;Parent=GCA000010485_03744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2149,COG:S,KEGG:K00389,RefSeq:WP_001296568.1,SO:0001217,UniParc:UPI0001C22DA5,UniRef:UniRef100_A0A061KEI0,UniRef:UniRef50_P0ADM0,UniRef:UniRef90_P0ADM0
contig_1	Pyrodigal	gene	3818888	3820381	.	-	.	ID=GCA000010485_03745_gene;locus_tag=GCA000010485_03745;gene=yidJ
contig_1	Pyrodigal	CDS	3818888	3820381	.	-	0	ID=GCA000010485_03745;Name=putative sulfatase YidJ;locus_tag=GCA000010485_03745;product=putative sulfatase YidJ;Dbxref=GO:0004065,GO:0046872;gene=yidJ;Parent=GCA000010485_03745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3119,COG:P,RefSeq:WP_000828477.1,SO:0001217,UniParc:UPI00005EF47E,UniRef:UniRef100_A0A0K4KR76,UniRef:UniRef50_P31447,UniRef:UniRef90_P31447;ec_number=3.1.6.-
contig_1	Pyrodigal	gene	3820378	3822093	.	-	.	ID=GCA000010485_03746_gene;locus_tag=GCA000010485_03746;gene=yidK
contig_1	Pyrodigal	CDS	3820378	3822093	.	-	0	ID=GCA000010485_03746;Name=solute:sodium symporter family transporter;locus_tag=GCA000010485_03746;product=solute:sodium symporter family transporter;Dbxref=GO:0005412,GO:0005886,GO:0016020,GO:0022857,GO:0055085;gene=yidK;Parent=GCA000010485_03746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001087174.1,SO:0001217,UniParc:UPI0001C22DA6,UniRef:UniRef100_A0A066T6R6,UniRef:UniRef50_P31448,UniRef:UniRef90_P31448
contig_1	Pyrodigal	gene	3822260	3823126	.	+	.	ID=GCA000010485_03747_gene;locus_tag=GCA000010485_03747;gene=yidL
contig_1	Pyrodigal	CDS	3822260	3823126	.	+	0	ID=GCA000010485_03747;Name=putative HTH-type transcriptional regulator YidL;locus_tag=GCA000010485_03747;product=putative HTH-type transcriptional regulator YidL;Dbxref=GO:0003700,GO:0043565;gene=yidL;Parent=GCA000010485_03747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296571.1,SO:0001217,UniParc:UPI000187C0BF,UniRef:UniRef100_A0A066TAY0,UniRef:UniRef50_P31449,UniRef:UniRef90_P31449
contig_1	Pyrodigal	gene	3823216	3824877	.	-	.	ID=GCA000010485_03748_gene;locus_tag=GCA000010485_03748;gene=yidE
contig_1	Pyrodigal	CDS	3823216	3824877	.	-	0	ID=GCA000010485_03748;Name=putative transporter;locus_tag=GCA000010485_03748;product=putative transporter;Dbxref=GO:0005886,GO:0006813,GO:0008324;gene=yidE;Parent=GCA000010485_03748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2985,COG:R,KEGG:K07085,RefSeq:WP_001279774.1,SO:0001217,UniParc:UPI0001C22DA8,UniRef:UniRef100_A0A061KJ29,UniRef:UniRef50_P60872,UniRef:UniRef90_P60872
contig_1	Pyrodigal	gene	3825075	3825503	.	-	.	ID=GCA000010485_03749_gene;locus_tag=GCA000010485_03749;gene=ibpB
contig_1	Pyrodigal	CDS	3825075	3825503	.	-	0	ID=GCA000010485_03749;Name=small heat shock chaperone IbpB;locus_tag=GCA000010485_03749;product=small heat shock chaperone IbpB;Dbxref=GO:0005737,GO:0006950,GO:0050821,GO:0051082;gene=ibpB;Parent=GCA000010485_03749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0071,COG:O,KEGG:K04080,RefSeq:WP_001243431.1,SO:0001217,UniParc:UPI000012D125,UniRef:UniRef100_P0C058,UniRef:UniRef50_P0C058,UniRef:UniRef90_P0C058
contig_1	Pyrodigal	gene	3825615	3826028	.	-	.	ID=GCA000010485_03750_gene;locus_tag=GCA000010485_03750;gene=ibpA
contig_1	Pyrodigal	CDS	3825615	3826028	.	-	0	ID=GCA000010485_03750;Name=small heat shock chaperone IbpA;locus_tag=GCA000010485_03750;product=small heat shock chaperone IbpA;Dbxref=GO:0005737,GO:0006950,GO:0050821,GO:0051082;gene=ibpA;Parent=GCA000010485_03750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0071,COG:O,KEGG:K04080,RefSeq:WP_001243437.1,SO:0001217,UniParc:UPI000012D123,UniRef:UniRef100_P0C054,UniRef:UniRef50_P0C054,UniRef:UniRef90_P0C054
contig_1	Infernal	regulatory_region	3826022	3826094	8.6e-16	-	.	ID=EFPPCJGBKI_300;Name=Repression of heat shock gene expression (ROSE) element;product=Repression of heat shock gene expression (ROSE) element;Dbxref=RFAM:RF01832;inference=profile:Rfam:RF01832;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	3826406	3826666	.	+	.	ID=GCA000010485_03751_gene;locus_tag=GCA000010485_03751
contig_1	Pyrodigal	CDS	3826406	3826666	.	+	0	ID=GCA000010485_03751;Name=Outer membrane protein;locus_tag=GCA000010485_03751;product=Outer membrane protein;Parent=GCA000010485_03751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_W1W0P7,UniRef:UniRef90_W1W0P7
contig_1	Pyrodigal	gene	3826670	3827884	.	-	.	ID=GCA000010485_03752_gene;locus_tag=GCA000010485_03752;gene=yidR
contig_1	Pyrodigal	CDS	3826670	3827884	.	-	0	ID=GCA000010485_03752;Name=putative protein YidR;locus_tag=GCA000010485_03752;product=putative protein YidR;Dbxref=GO:0046397;gene=yidR;Parent=GCA000010485_03752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001532049.1,SO:0001217,UniParc:UPI0002A213DC,UniRef:UniRef100_A0A1X9VDN4,UniRef:UniRef50_P31455,UniRef:UniRef90_P31455
contig_1	Pyrodigal	gene	3827985	3829085	.	+	.	ID=GCA000010485_03753_gene;locus_tag=GCA000010485_03753;gene=cbrA
contig_1	Pyrodigal	CDS	3827985	3829085	.	+	0	ID=GCA000010485_03753;Name=colicin M resistance protein;locus_tag=GCA000010485_03753;product=colicin M resistance protein;Dbxref=GO:0071949;gene=cbrA;Parent=GCA000010485_03753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001340434,COG:C,COG:COG0644,RefSeq:WP_001532050.1,SO:0001217,UniParc:UPI0002185691,UniRef:UniRef100_A0A061KGR9,UniRef:UniRef50_P31456,UniRef:UniRef90_P31456
contig_1	Pyrodigal	gene	3829046	3830338	.	-	.	ID=GCA000010485_03754_gene;locus_tag=GCA000010485_03754;gene=dgoT
contig_1	Pyrodigal	CDS	3829046	3830338	.	-	0	ID=GCA000010485_03754;Name=D-galactonate transporter;locus_tag=GCA000010485_03754;product=D-galactonate transporter;Dbxref=GO:0005886,GO:0015295,GO:0034194,GO:0042875,GO:0042881;gene=dgoT;Parent=GCA000010485_03754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001296574.1,SO:0001217,UniParc:UPI000176B7B3,UniRef:UniRef100_A0A6F9NME2,UniRef:UniRef50_P0AA76,UniRef:UniRef90_P0AA76
contig_1	Pyrodigal	gene	3830458	3831606	.	-	.	ID=GCA000010485_03755_gene;locus_tag=GCA000010485_03755;gene=dgoD
contig_1	Pyrodigal	CDS	3830458	3831606	.	-	0	ID=GCA000010485_03755;Name=galactonate dehydratase;locus_tag=GCA000010485_03755;product=galactonate dehydratase;Dbxref=GO:0000287,GO:0008869,GO:0009063,GO:0034194;gene=dgoD;Parent=GCA000010485_03755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705012.1,SO:0001217,UniParc:UPI00005EF476,UniRef:UniRef100_B7MGB3,UniRef:UniRef50_Q6BF17,UniRef:UniRef90_Q6BF17;ec_number=4.2.1.6
contig_1	Pyrodigal	gene	3831603	3832220	.	-	.	ID=GCA000010485_03756_gene;locus_tag=GCA000010485_03756;gene=dgoA
contig_1	Pyrodigal	CDS	3831603	3832220	.	-	0	ID=GCA000010485_03756;Name=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;locus_tag=GCA000010485_03756;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;gene=dgoA;Parent=GCA000010485_03756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001198722,KEGG:K01631,RefSeq:WP_001198715.1,SO:0001217,UniParc:UPI0001C22DAE,UniRef:UniRef100_A0A066TAY8,UniRef:UniRef50_A0A0D8VW64,UniRef:UniRef90_A0A0D8VW64;ec_number=4.1.2.21
contig_1	Pyrodigal	gene	3832204	3833082	.	-	.	ID=GCA000010485_03757_gene;locus_tag=GCA000010485_03757;gene=dgoK
contig_1	Pyrodigal	CDS	3832204	3833082	.	-	0	ID=GCA000010485_03757;Name=2-dehydro-3-deoxygalactonokinase;locus_tag=GCA000010485_03757;product=2-dehydro-3-deoxygalactonokinase;Dbxref=GO:0005524,GO:0008671,GO:0034194;gene=dgoK;Parent=GCA000010485_03757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000127091,KEGG:K00883,RefSeq:WP_000127051.1,SO:0001217,UniParc:UPI0001C22DAF,UniRef:UniRef100_A0A061YKH3,UniRef:UniRef50_P31459,UniRef:UniRef90_P31459;ec_number=2.7.1.58
contig_1	Pyrodigal	gene	3833079	3833768	.	-	.	ID=GCA000010485_03758_gene;locus_tag=GCA000010485_03758;gene=dgoR
contig_1	Pyrodigal	CDS	3833079	3833768	.	-	0	ID=GCA000010485_03758;Name=D-galactonate utilization transcriptional regulator DgoR;locus_tag=GCA000010485_03758;product=D-galactonate utilization transcriptional regulator DgoR;Dbxref=GO:0000976,GO:0000987,GO:0001217,GO:0003677,GO:0042802,GO:0046872,GO:0098531,GO:2000143;gene=dgoR;Parent=GCA000010485_03758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000174305,KEGG:K19776,RefSeq:WP_000174305.1,SO:0001217,UniParc:UPI000000E7A9,UniRef:UniRef100_P31460,UniRef:UniRef50_P31460,UniRef:UniRef90_P31460
contig_1	Pyrodigal	gene	3834047	3834703	.	+	.	ID=GCA000010485_03759_gene;locus_tag=GCA000010485_03759
contig_1	Pyrodigal	CDS	3834047	3834703	.	+	0	ID=GCA000010485_03759;Name=Lipoprotein;locus_tag=GCA000010485_03759;product=Lipoprotein;Parent=GCA000010485_03759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296575.1,SO:0001217,UniParc:UPI0001C22DB0,UniRef:UniRef100_A0A061YL75,UniRef:UniRef50_A0A2G9BV43,UniRef:UniRef90_A0A2G9BV43
contig_1	Pyrodigal	gene	3834747	3835559	.	-	.	ID=GCA000010485_03760_gene;locus_tag=GCA000010485_03760;gene=yidA
contig_1	Pyrodigal	CDS	3834747	3835559	.	-	0	ID=GCA000010485_03760;Name=sugar-phosphatase;locus_tag=GCA000010485_03760;product=sugar-phosphatase;Dbxref=GO:0000287,GO:0005829,GO:0016311,GO:0016787,GO:0016791,GO:0050308;gene=yidA;Parent=GCA000010485_03760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_000985549.1,SO:0001217,UniParc:UPI000013B3A5,UniRef:UniRef100_P0A8Y5,UniRef:UniRef50_P0A8Y5,UniRef:UniRef90_P0A8Y5;ec_number=3.1.3.23
contig_1	Pyrodigal	gene	3835673	3836071	.	-	.	ID=GCA000010485_03761_gene;locus_tag=GCA000010485_03761;gene=yidB
contig_1	Pyrodigal	CDS	3835673	3836071	.	-	0	ID=GCA000010485_03761;Name=DUF937 domain-containing protein;locus_tag=GCA000010485_03761;product=DUF937 domain-containing protein;gene=yidB;Parent=GCA000010485_03761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3753,COG:S,RefSeq:WP_001296576.1,SO:0001217,UniParc:UPI0001C22DB1,UniRef:UniRef100_A0A1U9TW48,UniRef:UniRef50_P09996,UniRef:UniRef90_Q329C0
contig_1	Pyrodigal	gene	3836215	3838629	.	-	.	ID=GCA000010485_03762_gene;locus_tag=GCA000010485_03762;gene=gyrB
contig_1	Pyrodigal	CDS	3836215	3838629	.	-	0	ID=GCA000010485_03762;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000010485_03762;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046677,GO:0046872;gene=gyrB;Parent=GCA000010485_03762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_000072072.1,SO:0001217,UniParc:UPI00005E38A1,UniRef:UniRef100_A0A066TB66,UniRef:UniRef50_P0AES6,UniRef:UniRef90_P0AES6;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	3838658	3839731	.	-	.	ID=GCA000010485_03763_gene;locus_tag=GCA000010485_03763;gene=recF
contig_1	Pyrodigal	CDS	3838658	3839731	.	-	0	ID=GCA000010485_03763;Name=DNA replication/repair protein RecF;locus_tag=GCA000010485_03763;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000010485_03763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_000060112.1,SO:0001217,UniParc:UPI000016552D,UniRef:UniRef100_P0A7H0,UniRef:UniRef50_P0A7H0,UniRef:UniRef90_P0A7H0
contig_1	Pyrodigal	gene	3839731	3840831	.	-	.	ID=GCA000010485_03764_gene;locus_tag=GCA000010485_03764;gene=dnaN
contig_1	Pyrodigal	CDS	3839731	3840831	.	-	0	ID=GCA000010485_03764;Name=DNA polymerase III subunit beta;locus_tag=GCA000010485_03764;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005829,GO:0006260,GO:0006261,GO:0006271,GO:0006974,GO:0008408,GO:0009360,GO:0030174,GO:0030894,GO:0032297,GO:0042276,GO:0042802,GO:0042803,GO:0044787,GO:1990078,GO:1990085;gene=dnaN;Parent=GCA000010485_03764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_000673464.1,SO:0001217,UniParc:UPI00001129AC,UniRef:UniRef100_P0A988,UniRef:UniRef50_P0A988,UniRef:UniRef90_P0A988;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3840836	3842239	.	-	.	ID=GCA000010485_03765_gene;locus_tag=GCA000010485_03765;gene=dnaA
contig_1	Pyrodigal	CDS	3840836	3842239	.	-	0	ID=GCA000010485_03765;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000010485_03765;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887;gene=dnaA;Parent=GCA000010485_03765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,RefSeq:WP_000059111.1,SO:0001217,UniParc:UPI0000129521,UniRef:UniRef100_P03004,UniRef:UniRef50_P03004,UniRef:UniRef90_P03004;ec_number=3.6.4.-
contig_1	Infernal	gene	3841649	3841729	.	+	.	ID=GCA000010485_03766_gene;locus_tag=GCA000010485_03766;gene=asdA
contig_1	Infernal	ncRNA	3841649	3841729	2.3e-19	+	.	ID=GCA000010485_03766;Name=antisense RNA of dnaA mRNA;locus_tag=GCA000010485_03766;gene=asdA;product=antisense RNA of dnaA mRNA;Dbxref=RFAM:RF02674;Parent=GCA000010485_03766_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02674
contig_1	BLAST+	rep_origin	3842240	3842845	.	?	.	ID=EFPPCJGBKI_4832;Name=origin of replication;Note=origin of replication
contig_1	Bakta	gene	3842536	3842616	.	+	.	ID=GCA000010485_03767_gene;locus_tag=GCA000010485_03767;inference=ab initio prediction:Bakta;gene=ysdD
contig_1	Bakta	CDS	3842536	3842616	.	+	0	ID=GCA000010485_03767;Name=Protein YsdD;locus_tag=GCA000010485_03767;product=Protein YsdD;gene=ysdD;Parent=GCA000010485_03767_gene;Note=RefSeq:WP_122984430.1,SO:0001217,UniParc:UPI000F09A8C8,UniRef:UniRef100_A0A3L0U425,UniRef:UniRef50_P0DPP8,UniRef:UniRef90_P0DPP8
contig_1	Pyrodigal	gene	3842846	3842986	.	+	.	ID=GCA000010485_03768_gene;locus_tag=GCA000010485_03768;gene=rpmH
contig_1	Pyrodigal	CDS	3842846	3842986	.	+	0	ID=GCA000010485_03768;Name=50S ribosomal protein L34;locus_tag=GCA000010485_03768;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA000010485_03768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_000831330.1,SO:0001217,UniParc:UPI000005A698,UniRef:UniRef100_P0A7P5,UniRef:UniRef50_P0A7P5,UniRef:UniRef90_P0A7P5
contig_1	Pyrodigal	gene	3843036	3843362	.	+	.	ID=GCA000010485_03769_gene;locus_tag=GCA000010485_03769;gene=rnpA
contig_1	Pyrodigal	CDS	3843036	3843362	.	+	0	ID=GCA000010485_03769;Name=ribonuclease P protein component;locus_tag=GCA000010485_03769;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0001682,GO:0004526,GO:0008033,GO:0030677,GO:0042781;gene=rnpA;Parent=GCA000010485_03769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0594,COG:J,RefSeq:WP_001296578.1,SO:0001217,UniParc:UPI0000DAD0D6,UniRef:UniRef100_A0A024LCB9,UniRef:UniRef50_Q8Z9U4,UniRef:UniRef90_A7MN01;ec_number=3.1.26.5
contig_1	Pyrodigal	gene	3843586	3845232	.	+	.	ID=GCA000010485_03770_gene;locus_tag=GCA000010485_03770;gene=yidC
contig_1	Pyrodigal	CDS	3843586	3845232	.	+	0	ID=GCA000010485_03770;Name=membrane protein insertase YidC;locus_tag=GCA000010485_03770;product=membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0016020,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000010485_03770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_000378258.1,SO:0001217,UniParc:UPI00000D0630,UniRef:UniRef100_B7UMH2,UniRef:UniRef50_P25714,UniRef:UniRef90_P25714
contig_1	Pyrodigal	gene	3845338	3846702	.	+	.	ID=GCA000010485_03771_gene;locus_tag=GCA000010485_03771;gene=mnmE
contig_1	Pyrodigal	CDS	3845338	3846702	.	+	0	ID=GCA000010485_03771;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA000010485_03771;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0002098,GO:0003924,GO:0005515,GO:0005525,GO:0005829,GO:0006400,GO:0030488,GO:0046872;gene=mnmE;Parent=GCA000010485_03771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0486,COG:J,RefSeq:WP_001282361.1,SO:0001217,UniParc:UPI00006733D6,UniRef:UniRef100_B7N211,UniRef:UniRef50_P25522,UniRef:UniRef90_P25522;ec_number=3.6.-.-
contig_1	Bakta	gene	3846944	3847018	.	+	.	ID=GCA000010485_03772_gene;locus_tag=GCA000010485_03772;inference=ab initio prediction:Bakta;gene=tnaC
contig_1	Bakta	CDS	3846944	3847018	.	+	0	ID=GCA000010485_03772;Name=Tryptophanase operon leader peptide;locus_tag=GCA000010485_03772;product=Tryptophanase operon leader peptide;Dbxref=GO:0006569,GO:0019843,GO:0031556,GO:0090358;gene=tnaC;Parent=GCA000010485_03772_gene;Note=RefSeq:WP_001364348.1,SO:0001217,UniParc:UPI00000480E1,UniRef:UniRef100_P0AD89,UniRef:UniRef50_P0AD89,UniRef:UniRef90_P0AD89
contig_1	Pyrodigal	gene	3847239	3848654	.	+	.	ID=GCA000010485_03773_gene;locus_tag=GCA000010485_03773;gene=tnaA
contig_1	Pyrodigal	CDS	3847239	3848654	.	+	0	ID=GCA000010485_03773;Name=tryptophanase;locus_tag=GCA000010485_03773;product=tryptophanase;Dbxref=GO:0006568,GO:0009034;gene=tnaA;Parent=GCA000010485_03773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3033,COG:E,RefSeq:WP_001296579.1,SO:0001217,UniParc:UPI0001C22CB4,UniRef:UniRef100_A0A066TAZ7,UniRef:UniRef50_P0A853,UniRef:UniRef90_P0A853;ec_number=4.1.99.1
contig_1	Pyrodigal	gene	3848746	3849993	.	+	.	ID=GCA000010485_03774_gene;locus_tag=GCA000010485_03774;gene=tnaB
contig_1	Pyrodigal	CDS	3848746	3849993	.	+	0	ID=GCA000010485_03774;Name=low affinity tryptophan permease TnaB;locus_tag=GCA000010485_03774;product=low affinity tryptophan permease TnaB;Dbxref=GO:0003333,GO:0005886,GO:0006569,GO:0015173,GO:0015293;gene=tnaB;Parent=GCA000010485_03774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000132074.1,SO:0001217,UniParc:UPI0000D50DBC,UniRef:UniRef100_A4GWI8,UniRef:UniRef50_P0AAD2,UniRef:UniRef90_P23173
contig_1	Pyrodigal	gene	3850125	3851300	.	+	.	ID=GCA000010485_03775_gene;locus_tag=GCA000010485_03775;gene=mdtL
contig_1	Pyrodigal	CDS	3850125	3851300	.	+	0	ID=GCA000010485_03775;Name=multidrug efflux MFS transporter MdtL;locus_tag=GCA000010485_03775;product=multidrug efflux MFS transporter MdtL;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=mdtL;Parent=GCA000010485_03775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000085982,COG:COG2814,COG:G,KEGG:K08163,RefSeq:WP_000085967.1,SO:0001217,UniParc:UPI0001C22CB5,UniRef:UniRef100_A0A066T2Y7,UniRef:UniRef50_P31462,UniRef:UniRef90_P31462
contig_1	Pyrodigal	gene	3851275	3852234	.	+	.	ID=GCA000010485_03776_gene;locus_tag=GCA000010485_03776;gene=yidZ
contig_1	Pyrodigal	CDS	3851275	3852234	.	+	0	ID=GCA000010485_03776;Name=HTH-type transcriptional regulator YidZ;locus_tag=GCA000010485_03776;product=HTH-type transcriptional regulator YidZ;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=yidZ;Parent=GCA000010485_03776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001296580.1,SO:0001217,UniParc:UPI0001C22CB6,UniRef:UniRef100_A0A061YJF4,UniRef:UniRef50_P31463,UniRef:UniRef90_P31463
contig_1	Pyrodigal	gene	3852391	3853140	.	+	.	ID=GCA000010485_03777_gene;locus_tag=GCA000010485_03777;gene=yieE
contig_1	Pyrodigal	CDS	3852391	3853140	.	+	0	ID=GCA000010485_03777;Name=putative protein YieE;locus_tag=GCA000010485_03777;product=putative protein YieE;Dbxref=GO:0000287,GO:0005829,GO:0008897,GO:0019878;gene=yieE;Parent=GCA000010485_03777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_001296581.1,SO:0001217,UniParc:UPI000199A552,UniRef:UniRef100_P0ADM8,UniRef:UniRef50_P0ADM8,UniRef:UniRef90_P0ADM8
contig_1	Pyrodigal	gene	3853162	3853728	.	+	.	ID=GCA000010485_03778_gene;locus_tag=GCA000010485_03778;gene=yieF
contig_1	Pyrodigal	CDS	3853162	3853728	.	+	0	ID=GCA000010485_03778;Name=class I chromate reductase YieF;locus_tag=GCA000010485_03778;product=class I chromate reductase YieF;Dbxref=GO:0005829,GO:0008753,GO:0010181,GO:0050136;gene=yieF;Parent=GCA000010485_03778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001291268,COG:C,COG:COG0431,KEGG:K19784,RefSeq:WP_001291261.1,SO:0001217,UniParc:UPI00016A08D1,UniRef:UniRef100_A0A037YN28,UniRef:UniRef50_P0AGE6,UniRef:UniRef90_P0AGE6;ec_number=1.6.5.2
contig_1	Pyrodigal	gene	3853781	3855118	.	-	.	ID=GCA000010485_03779_gene;locus_tag=GCA000010485_03779;gene=adeP
contig_1	Pyrodigal	CDS	3853781	3855118	.	-	0	ID=GCA000010485_03779;Name=adenine permease AdeP;locus_tag=GCA000010485_03779;product=adenine permease AdeP;Dbxref=GO:0005886,GO:0015207,GO:0015295,GO:0015853;gene=adeP;Parent=GCA000010485_03779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000019348,COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_001296582.1,SO:0001217,UniParc:UPI00000DF29B,UniRef:UniRef100_A0A061LDD2,UniRef:UniRef50_P31466,UniRef:UniRef90_P31466
contig_1	Pyrodigal	gene	3855285	3855950	.	+	.	ID=GCA000010485_03780_gene;locus_tag=GCA000010485_03780;gene=yieH
contig_1	Pyrodigal	CDS	3855285	3855950	.	+	0	ID=GCA000010485_03780;Name=6-phosphogluconate phosphatase;locus_tag=GCA000010485_03780;product=6-phosphogluconate phosphatase;gene=yieH;Parent=GCA000010485_03780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000078061.1,SO:0001217,UniParc:UPI0001C22CB7,UniRef:UniRef100_A0A061YKI7,UniRef:UniRef50_A0A0D6GJ90,UniRef:UniRef90_A0A0D6GJ90;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	3856049	3856474	.	+	.	ID=GCA000010485_03781_gene;locus_tag=GCA000010485_03781;gene=tnpA
contig_1	Pyrodigal	CDS	3856049	3856474	.	+	0	ID=GCA000010485_03781;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_03781;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_03781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_1	Pyrodigal	gene	3856471	3856821	.	+	.	ID=GCA000010485_03782_gene;locus_tag=GCA000010485_03782;gene=tnpB
contig_1	Pyrodigal	CDS	3856471	3856821	.	+	0	ID=GCA000010485_03782;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_03782;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_03782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_1	Pyrodigal	gene	3856852	3858465	.	+	.	ID=GCA000010485_03783_gene;locus_tag=GCA000010485_03783;gene=tnp
contig_1	Pyrodigal	CDS	3856852	3858465	.	+	0	ID=GCA000010485_03783;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_03783;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_03783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_1	Pyrodigal	gene	3858557	3859024	.	+	.	ID=GCA000010485_03784_gene;locus_tag=GCA000010485_03784;gene=cbrB
contig_1	Pyrodigal	CDS	3858557	3859024	.	+	0	ID=GCA000010485_03784;Name=Inner membrane protein CbrB;locus_tag=GCA000010485_03784;product=Inner membrane protein CbrB;Dbxref=GO:0005886;gene=cbrB;Parent=GCA000010485_03784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000116776.1,SO:0001217,UniParc:UPI0001C22CB8,UniRef:UniRef100_A0A061KGP2,UniRef:UniRef50_P31468,UniRef:UniRef90_P31468
contig_1	Pyrodigal	gene	3859073	3859660	.	+	.	ID=GCA000010485_03785_gene;locus_tag=GCA000010485_03785;gene=cbrC
contig_1	Pyrodigal	CDS	3859073	3859660	.	+	0	ID=GCA000010485_03785;Name=PF03691 family colicin E2 tolerance protein CbrC;locus_tag=GCA000010485_03785;product=PF03691 family colicin E2 tolerance protein CbrC;Dbxref=GO:0030153;gene=cbrC;Parent=GCA000010485_03785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09925,RefSeq:WP_000193060.1,SO:0001217,UniParc:UPI0001C22CB9,UniRef:UniRef100_A0A061KEF0,UniRef:UniRef50_P31469,UniRef:UniRef90_P31469
contig_1	Pyrodigal	gene	3859721	3860443	.	-	.	ID=GCA000010485_03786_gene;locus_tag=GCA000010485_03786
contig_1	Pyrodigal	CDS	3859721	3860443	.	-	0	ID=GCA000010485_03786;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000010485_03786;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0006044;Parent=GCA000010485_03786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000766877.1,SO:0001217,UniParc:UPI00000DF29E,UniRef:UniRef100_A0A066TB03,UniRef:UniRef50_P31470,UniRef:UniRef90_A0AAE9TM72;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	3860458	3861627	.	-	.	ID=GCA000010485_03787_gene;locus_tag=GCA000010485_03787;gene=yieL
contig_1	Pyrodigal	CDS	3860458	3861627	.	-	0	ID=GCA000010485_03787;Name=putative protein YieL;locus_tag=GCA000010485_03787;product=putative protein YieL;Dbxref=GO:0004553,GO:0005975,GO:0016747;gene=yieL;Parent=GCA000010485_03787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296584.1,SO:0001217,UniParc:UPI0001C22CBA,UniRef:UniRef100_A0A066TB82,UniRef:UniRef50_P31471,UniRef:UniRef90_P31471
contig_1	Pyrodigal	gene	3861654	3863270	.	-	.	ID=GCA000010485_03788_gene;locus_tag=GCA000010485_03788;gene=bglH
contig_1	Pyrodigal	CDS	3861654	3863270	.	-	0	ID=GCA000010485_03788;Name=carbohydrate-specific porin BglH;locus_tag=GCA000010485_03788;product=carbohydrate-specific porin BglH;Dbxref=GO:0006811,GO:0009279,GO:0015144,GO:0015288,GO:0015774,GO:0046930;gene=bglH;Parent=GCA000010485_03788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000489881,RefSeq:WP_000489811.1,SO:0001217,UniParc:UPI0001C22CBB,UniRef:UniRef100_A0A061KIZ0,UniRef:UniRef50_P26218,UniRef:UniRef90_P26218
contig_1	Pyrodigal	gene	3863356	3864750	.	-	.	ID=GCA000010485_03789_gene;locus_tag=GCA000010485_03789;gene=bglB
contig_1	Pyrodigal	CDS	3863356	3864750	.	-	0	ID=GCA000010485_03789;Name=6-phospho-beta-glucosidase BglB;locus_tag=GCA000010485_03789;product=6-phospho-beta-glucosidase BglB;Dbxref=GO:0004553,GO:0005829,GO:0008422,GO:0008706,GO:0016052;gene=bglB;Parent=GCA000010485_03789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000643228,RefSeq:WP_000643260.1,SO:0001217,UniParc:UPI0001C22CBC,UniRef:UniRef100_A0A066T2G0,UniRef:UniRef50_P40740,UniRef:UniRef90_P11988;ec_number=3.2.1.86
contig_1	Pyrodigal	gene	3864769	3866643	.	-	.	ID=GCA000010485_03790_gene;locus_tag=GCA000010485_03790;gene=bglF
contig_1	Pyrodigal	CDS	3864769	3866643	.	-	0	ID=GCA000010485_03790;Name=PTS beta-glucoside transporter subunit IIABC;locus_tag=GCA000010485_03790;product=PTS beta-glucoside transporter subunit IIABC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0015771,GO:0016301,GO:0090589;gene=bglF;Parent=GCA000010485_03790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02757,RefSeq:WP_000137323.1,SO:0001217,UniParc:UPI0001C22CBD,UniRef:UniRef100_A0A066T6U4,UniRef:UniRef50_P08722,UniRef:UniRef90_P08722;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	3866777	3867613	.	-	.	ID=GCA000010485_03791_gene;locus_tag=GCA000010485_03791;gene=bglG
contig_1	Pyrodigal	CDS	3866777	3867613	.	-	0	ID=GCA000010485_03791;Name=transcriptional antiterminator BglG;locus_tag=GCA000010485_03791;product=transcriptional antiterminator BglG;Dbxref=GO:0006355;gene=bglG;Parent=GCA000010485_03791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03488,RefSeq:WP_001305013.1,SO:0001217,UniParc:UPI00019F3507,UniRef:UniRef100_A0A0J8XGN5,UniRef:UniRef50_A0A484YF48,UniRef:UniRef90_B7LK67
contig_1	Bakta	gene	3867650	3867709	.	-	.	ID=GCA000010485_03792_gene;locus_tag=GCA000010485_03792;inference=ab initio prediction:Bakta;gene=bglC
contig_1	Bakta	CDS	3867650	3867709	.	-	0	ID=GCA000010485_03792;Name=BglC protein;locus_tag=GCA000010485_03792;product=BglC protein;gene=bglC;Parent=GCA000010485_03792_gene;Note=SO:0001217,UniParc:UPI00000AF0E5,UniRef:UniRef100_Q47079,UniRef:UniRef50_Q47079,UniRef:UniRef90_Q47079
contig_1	Pyrodigal	gene	3867899	3868624	.	-	.	ID=GCA000010485_03793_gene;locus_tag=GCA000010485_03793;gene=phoU
contig_1	Pyrodigal	CDS	3867899	3868624	.	-	0	ID=GCA000010485_03793;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000010485_03793;product=phosphate signaling complex protein PhoU;Dbxref=GO:0005737,GO:0006817,GO:0010629,GO:0030643,GO:0042803,GO:0045936,GO:2000186;gene=phoU;Parent=GCA000010485_03793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0704,COG:P,RefSeq:WP_000377784.1,SO:0001217,UniParc:UPI00005EF461,UniRef:UniRef100_Q8FBT8,UniRef:UniRef50_Q83WB2,UniRef:UniRef90_Q8FBT8
contig_1	Pyrodigal	gene	3868639	3869412	.	-	.	ID=GCA000010485_03794_gene;locus_tag=GCA000010485_03794;gene=pstB
contig_1	Pyrodigal	CDS	3868639	3869412	.	-	0	ID=GCA000010485_03794;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000010485_03794;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000010485_03794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_000063125.1,SO:0001217,UniParc:UPI000003EB1A,UniRef:UniRef100_P0AAH0,UniRef:UniRef50_P0AAH0,UniRef:UniRef90_P0AAH0;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	3869503	3870393	.	-	.	ID=GCA000010485_03795_gene;locus_tag=GCA000010485_03795;gene=pstA
contig_1	Pyrodigal	CDS	3869503	3870393	.	-	0	ID=GCA000010485_03795;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000010485_03795;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0006974,GO:0016020,GO:0035435,GO:0055052;gene=pstA;Parent=GCA000010485_03795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0581,COG:P,RefSeq:WP_001251986.1,SO:0001217,UniParc:UPI0001C22CBE,UniRef:UniRef100_A0A066T2G3,UniRef:UniRef50_P07654,UniRef:UniRef90_P07654;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	3870393	3871352	.	-	.	ID=GCA000010485_03796_gene;locus_tag=GCA000010485_03796;gene=pstC
contig_1	Pyrodigal	CDS	3870393	3871352	.	-	0	ID=GCA000010485_03796;Name=phosphate ABC transporter permease PstC;locus_tag=GCA000010485_03796;product=phosphate ABC transporter permease PstC;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0009314,GO:0016020,GO:0035435,GO:0055052,GO:0055085;gene=pstC;Parent=GCA000010485_03796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0573,COG:P,RefSeq:WP_000741620.1,SO:0001217,UniParc:UPI000003EB1C,UniRef:UniRef100_P0AGH8,UniRef:UniRef50_P0AGH8,UniRef:UniRef90_P0AGH8;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	3871438	3872478	.	-	.	ID=GCA000010485_03797_gene;locus_tag=GCA000010485_03797;gene=pstS
contig_1	Pyrodigal	CDS	3871438	3872478	.	-	0	ID=GCA000010485_03797;Name=phosphate ABC transporter substrate-binding protein PstS;locus_tag=GCA000010485_03797;product=phosphate ABC transporter substrate-binding protein PstS;Dbxref=GO:0035435,GO:0042301,GO:0042597,GO:0043190;gene=pstS;Parent=GCA000010485_03797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0226,COG:P,RefSeq:WP_000867146.1,SO:0001217,UniParc:UPI000003EB1D,UniRef:UniRef100_P0AG82,UniRef:UniRef50_P0AG82,UniRef:UniRef90_P0AG82;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	3872792	3874621	.	-	.	ID=GCA000010485_03798_gene;locus_tag=GCA000010485_03798;gene=glmS
contig_1	Pyrodigal	CDS	3872792	3874621	.	-	0	ID=GCA000010485_03798;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000010485_03798;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000010485_03798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0449,COG:M,KEGG:K00820,RefSeq:WP_000334086.1,SO:0001217,UniParc:UPI000000E7C1,UniRef:UniRef100_Q83IY4,UniRef:UniRef50_P17169,UniRef:UniRef90_P17169;ec_number=2.6.1.16
contig_1	Pyrodigal	gene	3874783	3876153	.	-	.	ID=GCA000010485_03799_gene;locus_tag=GCA000010485_03799;gene=glmU
contig_1	Pyrodigal	CDS	3874783	3876153	.	-	0	ID=GCA000010485_03799;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA000010485_03799;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0005737,GO:0006048,GO:0008360,GO:0009245,GO:0009252,GO:0016020,GO:0019134,GO:0071555;gene=glmU;Parent=GCA000010485_03799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1207,COG:M,RefSeq:WP_000933716.1,SO:0001217,UniParc:UPI0000DAD0DF,UniRef:UniRef100_Q0TAX9,UniRef:UniRef50_P0ACC7,UniRef:UniRef90_Q8ZKX0
contig_1	Infernal	gene	3876237	3876394	.	+	.	ID=GCA000010485_03800_gene;locus_tag=GCA000010485_03800;gene=STnc410
contig_1	Infernal	ncRNA	3876237	3876394	5.7e-26	+	.	ID=GCA000010485_03800;Name=Enterobacterial sRNA STnc410;locus_tag=GCA000010485_03800;product=Enterobacterial sRNA STnc410;Dbxref=RFAM:RF02060;Parent=GCA000010485_03800_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02060
contig_1	Pyrodigal	gene	3876507	3876926	.	-	.	ID=GCA000010485_03801_gene;locus_tag=GCA000010485_03801;gene=atpC
contig_1	Pyrodigal	CDS	3876507	3876926	.	-	0	ID=GCA000010485_03801;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000010485_03801;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000010485_03801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_001251965.1,SO:0001217,UniParc:UPI000003EAF1,UniRef:UniRef100_P0A6E6,UniRef:UniRef50_P0A6E6,UniRef:UniRef90_P0A6E6;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3876947	3878329	.	-	.	ID=GCA000010485_03802_gene;locus_tag=GCA000010485_03802;gene=atpD
contig_1	Pyrodigal	CDS	3876947	3878329	.	-	0	ID=GCA000010485_03802;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000010485_03802;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000010485_03802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_000190506.1,SO:0001217,UniParc:UPI000003EAF2,UniRef:UniRef100_P0ABB4,UniRef:UniRef50_P0ABB4,UniRef:UniRef90_P0ABB4;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3878356	3879219	.	-	.	ID=GCA000010485_03803_gene;locus_tag=GCA000010485_03803;gene=atpG
contig_1	Pyrodigal	CDS	3878356	3879219	.	-	0	ID=GCA000010485_03803;Name=F0F1 ATP synthase subunit gamma;locus_tag=GCA000010485_03803;product=F0F1 ATP synthase subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000010485_03803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,RefSeq:WP_000896498.1,SO:0001217,UniParc:UPI000003EAF3,UniRef:UniRef100_P0ABA6,UniRef:UniRef50_P0ABA6,UniRef:UniRef90_P0ABA6;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3879270	3880811	.	-	.	ID=GCA000010485_03804_gene;locus_tag=GCA000010485_03804;gene=atpA
contig_1	Pyrodigal	CDS	3879270	3880811	.	-	0	ID=GCA000010485_03804;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000010485_03804;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000010485_03804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_001176745.1,SO:0001217,UniParc:UPI000003EAF4,UniRef:UniRef100_P0ABB0,UniRef:UniRef50_P0ABB0,UniRef:UniRef90_P0ABB0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3880824	3881357	.	-	.	ID=GCA000010485_03805_gene;locus_tag=GCA000010485_03805;gene=atpH
contig_1	Pyrodigal	CDS	3880824	3881357	.	-	0	ID=GCA000010485_03805;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA000010485_03805;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0005886,GO:0015986,GO:0016020,GO:0045261,GO:0046933;gene=atpH;Parent=GCA000010485_03805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_001288584.1,SO:0001217,UniParc:UPI0001C22D68,UniRef:UniRef100_A0A3K0NU61,UniRef:UniRef50_Q7CFM5,UniRef:UniRef90_Q83PJ9;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3881372	3881842	.	-	.	ID=GCA000010485_03806_gene;locus_tag=GCA000010485_03806;gene=atpF
contig_1	Pyrodigal	CDS	3881372	3881842	.	-	0	ID=GCA000010485_03806;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000010485_03806;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0045263,GO:0046933,GO:0046961;gene=atpF;Parent=GCA000010485_03806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_001052219.1,SO:0001217,UniParc:UPI000003EAF6,UniRef:UniRef100_P0ABA0,UniRef:UniRef50_P0ABA0,UniRef:UniRef90_P0ABA0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3881904	3882143	.	-	.	ID=GCA000010485_03807_gene;locus_tag=GCA000010485_03807;gene=atpE
contig_1	Pyrodigal	CDS	3881904	3882143	.	-	0	ID=GCA000010485_03807;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000010485_03807;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000010485_03807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_000429386.1,SO:0001217,UniParc:UPI000003EAF7,UniRef:UniRef100_A8ACP3,UniRef:UniRef50_A0KQY3,UniRef:UniRef90_A1JTD2;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3882190	3883005	.	-	.	ID=GCA000010485_03808_gene;locus_tag=GCA000010485_03808;gene=atpB
contig_1	Pyrodigal	CDS	3882190	3883005	.	-	0	ID=GCA000010485_03808;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000010485_03808;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000010485_03808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,RefSeq:WP_000135618.1,SO:0001217,UniParc:UPI00000DF2AE,UniRef:UniRef100_B7UMK3,UniRef:UniRef50_P0AB98,UniRef:UniRef90_P0AB98;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3883014	3883394	.	-	.	ID=GCA000010485_03809_gene;locus_tag=GCA000010485_03809;gene=atpI
contig_1	Pyrodigal	CDS	3883014	3883394	.	-	0	ID=GCA000010485_03809;Name=F0F1 ATP synthase subunit I;locus_tag=GCA000010485_03809;product=F0F1 ATP synthase subunit I;Dbxref=GO:0005886,GO:0045263,GO:1902600;gene=atpI;Parent=GCA000010485_03809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3312,RefSeq:WP_000116695.1,SO:0001217,UniParc:UPI00005E421B,UniRef:UniRef100_P0ABC0,UniRef:UniRef50_P0ABC0,UniRef:UniRef90_P0ABC0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	3884011	3884634	.	-	.	ID=GCA000010485_03810_gene;locus_tag=GCA000010485_03810;gene=rsmG
contig_1	Pyrodigal	CDS	3884011	3884634	.	-	0	ID=GCA000010485_03810;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000010485_03810;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000010485_03810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0357,COG:J,RefSeq:WP_000932839.1,SO:0001217,UniParc:UPI000003EB78,UniRef:UniRef100_P0A6U5,UniRef:UniRef50_P0A6U5,UniRef:UniRef90_P0A6U5;ec_number=2.1.1.170
contig_1	Pyrodigal	gene	3884698	3886587	.	-	.	ID=GCA000010485_03811_gene;locus_tag=GCA000010485_03811;gene=mnmG
contig_1	Pyrodigal	CDS	3884698	3886587	.	-	0	ID=GCA000010485_03811;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA000010485_03811;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA000010485_03811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0445,COG:J,KEGG:K03495,RefSeq:WP_000499788.1,SO:0001217,UniParc:UPI000003EB79,UniRef:UniRef100_P0A6U3,UniRef:UniRef50_P0A6U3,UniRef:UniRef90_P0A6U3
contig_1	BLAST+	rep_origin	3886588	3886959	.	?	.	ID=EFPPCJGBKI_4833;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	3886966	3887409	.	-	.	ID=GCA000010485_03812_gene;locus_tag=GCA000010485_03812;gene=mioC
contig_1	Pyrodigal	CDS	3886966	3887409	.	-	0	ID=GCA000010485_03812;Name=FMN-binding protein MioC;locus_tag=GCA000010485_03812;product=FMN-binding protein MioC;Dbxref=GO:0005829,GO:0010181,GO:0051302;gene=mioC;Parent=GCA000010485_03812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_000763742.1,SO:0001217,UniParc:UPI0000165532,UniRef:UniRef100_P58208,UniRef:UniRef50_P03817,UniRef:UniRef90_P03817
contig_1	Pyrodigal	gene	3887499	3887957	.	-	.	ID=GCA000010485_03813_gene;locus_tag=GCA000010485_03813;gene=asnC
contig_1	Pyrodigal	CDS	3887499	3887957	.	-	0	ID=GCA000010485_03813;Name=transcriptional regulator AsnC;locus_tag=GCA000010485_03813;product=transcriptional regulator AsnC;Dbxref=GO:0005829,GO:0006355,GO:0043200,GO:0043565;gene=asnC;Parent=GCA000010485_03813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_000432970.1,SO:0001217,UniParc:UPI0000126121,UniRef:UniRef100_P0ACI6,UniRef:UniRef50_P0ACI6,UniRef:UniRef90_P0ACI6
contig_1	Pyrodigal	gene	3888109	3889101	.	+	.	ID=GCA000010485_03814_gene;locus_tag=GCA000010485_03814;gene=asnA
contig_1	Pyrodigal	CDS	3888109	3889101	.	+	0	ID=GCA000010485_03814;Name=aspartate--ammonia ligase;locus_tag=GCA000010485_03814;product=aspartate--ammonia ligase;Dbxref=GO:0004071,GO:0005524,GO:0005737,GO:0005829,GO:0006529,GO:0070981;gene=asnA;Parent=GCA000010485_03814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2502,COG:E,KEGG:K01914,RefSeq:WP_000845104.1,SO:0001217,UniParc:UPI0000126116,UniRef:UniRef100_P00963,UniRef:UniRef50_P00963,UniRef:UniRef90_P00963;ec_number=6.3.1.1
contig_1	Pyrodigal	gene	3889106	3890557	.	-	.	ID=GCA000010485_03815_gene;locus_tag=GCA000010485_03815;gene=viaA
contig_1	Pyrodigal	CDS	3889106	3890557	.	-	0	ID=GCA000010485_03815;Name=ATPase RavA stimulator ViaA;locus_tag=GCA000010485_03815;product=ATPase RavA stimulator ViaA;Dbxref=GO:0005829;gene=viaA;Parent=GCA000010485_03815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2425,COG:S,RefSeq:WP_000956650.1,SO:0001217,UniParc:UPI0001887881,UniRef:UniRef100_B7N2I4,UniRef:UniRef50_Q83IY2,UniRef:UniRef90_Q83IY2
contig_1	Pyrodigal	gene	3890551	3892047	.	-	.	ID=GCA000010485_03816_gene;locus_tag=GCA000010485_03816;gene=ravA
contig_1	Pyrodigal	CDS	3890551	3892047	.	-	0	ID=GCA000010485_03816;Name=ATPase RavA;locus_tag=GCA000010485_03816;product=ATPase RavA;Dbxref=GO:0005524,GO:0005737,GO:0016887;gene=ravA;Parent=GCA000010485_03816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_001386504.1,SO:0001217,UniParc:UPI000187C11A,UniRef:UniRef100_B7UML1,UniRef:UniRef50_P31473,UniRef:UniRef90_P31473;ec_number=3.6.3.-
contig_1	Pyrodigal	gene	3892270	3894138	.	+	.	ID=GCA000010485_03817_gene;locus_tag=GCA000010485_03817;gene=kup
contig_1	Pyrodigal	CDS	3892270	3894138	.	+	0	ID=GCA000010485_03817;Name=low affinity potassium transporter Kup;locus_tag=GCA000010485_03817;product=low affinity potassium transporter Kup;Dbxref=GO:0005886,GO:0015079,GO:0015293,GO:0016020;gene=kup;Parent=GCA000010485_03817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3158,COG:P,KEGG:K03549,RefSeq:WP_000102319.1,SO:0001217,UniParc:UPI000012E129,UniRef:UniRef100_P63183,UniRef:UniRef50_P63183,UniRef:UniRef90_P63183
contig_1	Pyrodigal	gene	3894305	3894724	.	+	.	ID=GCA000010485_03818_gene;locus_tag=GCA000010485_03818;gene=rbsD
contig_1	Pyrodigal	CDS	3894305	3894724	.	+	0	ID=GCA000010485_03818;Name=D-ribose pyranase;locus_tag=GCA000010485_03818;product=D-ribose pyranase;Dbxref=GO:0005829,GO:0016872,GO:0019303,GO:0048029,GO:0062193;gene=rbsD;Parent=GCA000010485_03818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06726,RefSeq:WP_001296586.1,SO:0001217,UniParc:UPI0001C22D69,UniRef:UniRef100_A0A061YD85,UniRef:UniRef50_P04982,UniRef:UniRef90_P04982;ec_number=5.4.99.62
contig_1	Pyrodigal	gene	3894732	3896237	.	+	.	ID=GCA000010485_03819_gene;locus_tag=GCA000010485_03819;gene=rbsA
contig_1	Pyrodigal	CDS	3894732	3896237	.	+	0	ID=GCA000010485_03819;Name=ribose ABC transporter ATP-binding protein RbsA;locus_tag=GCA000010485_03819;product=ribose ABC transporter ATP-binding protein RbsA;Dbxref=GO:0005524,GO:0005886,GO:0015611,GO:0016887;gene=rbsA;Parent=GCA000010485_03819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,RefSeq:WP_000387770.1,SO:0001217,UniParc:UPI000003EB7C,UniRef:UniRef100_P04983,UniRef:UniRef50_P04983,UniRef:UniRef90_P04983;ec_number=7.5.2.7
contig_1	Pyrodigal	gene	3896242	3897207	.	+	.	ID=GCA000010485_03820_gene;locus_tag=GCA000010485_03820;gene=rbsC
contig_1	Pyrodigal	CDS	3896242	3897207	.	+	0	ID=GCA000010485_03820;Name=ribose ABC transporter permease;locus_tag=GCA000010485_03820;product=ribose ABC transporter permease;Dbxref=GO:0005886,GO:0015591,GO:0015752,GO:0016020,GO:0022857,GO:0043190,GO:0055052,GO:0055085;gene=rbsC;Parent=GCA000010485_03820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_000211858.1,SO:0001217,UniParc:UPI000003EB7D,UniRef:UniRef100_P0AGI1,UniRef:UniRef50_P0AGI1,UniRef:UniRef90_P0AGI1
contig_1	Pyrodigal	gene	3897232	3898122	.	+	.	ID=GCA000010485_03821_gene;locus_tag=GCA000010485_03821;gene=rbsB
contig_1	Pyrodigal	CDS	3897232	3898122	.	+	0	ID=GCA000010485_03821;Name=ribose ABC transporter substrate-binding protein RbsB;locus_tag=GCA000010485_03821;product=ribose ABC transporter substrate-binding protein RbsB;Dbxref=GO:0015752,GO:0016020,GO:0030288,GO:0048029,GO:0050918,GO:0055052;gene=rbsB;Parent=GCA000010485_03821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_001056273.1,SO:0001217,UniParc:UPI00000D066F,UniRef:UniRef100_C3SL12,UniRef:UniRef50_P02925,UniRef:UniRef90_P02925
contig_1	Pyrodigal	gene	3898248	3899177	.	+	.	ID=GCA000010485_03822_gene;locus_tag=GCA000010485_03822;gene=rbsK
contig_1	Pyrodigal	CDS	3898248	3899177	.	+	0	ID=GCA000010485_03822;Name=ribokinase;locus_tag=GCA000010485_03822;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0019303,GO:0046872;gene=rbsK;Parent=GCA000010485_03822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_001545694.1,SO:0001217,UniParc:UPI0001C22D6A,UniRef:UniRef100_A0A7I0L8T6,UniRef:UniRef50_P0A9J6,UniRef:UniRef90_P0A9J6;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	3899181	3900173	.	+	.	ID=GCA000010485_03823_gene;locus_tag=GCA000010485_03823;gene=rbsR
contig_1	Pyrodigal	CDS	3899181	3900173	.	+	0	ID=GCA000010485_03823;Name=ribose operon transcriptional repressor RbsR;locus_tag=GCA000010485_03823;product=ribose operon transcriptional repressor RbsR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355;gene=rbsR;Parent=GCA000010485_03823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000224470.1,SO:0001217,UniParc:UPI0000163A3E,UniRef:UniRef100_P0ACQ0,UniRef:UniRef50_P0ACQ0,UniRef:UniRef90_P0ACQ0
contig_1	Pyrodigal	gene	3900139	3901566	.	-	.	ID=GCA000010485_03824_gene;locus_tag=GCA000010485_03824;gene=hsrA
contig_1	Pyrodigal	CDS	3900139	3901566	.	-	0	ID=GCA000010485_03824;Name=putative transport protein HsrA;locus_tag=GCA000010485_03824;product=putative transport protein HsrA;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=hsrA;Parent=GCA000010485_03824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001280867.1,SO:0001217,UniParc:UPI0001C22D6B,UniRef:UniRef100_A0A0K4KJS4,UniRef:UniRef50_P31474,UniRef:UniRef90_P31474
contig_1	Pyrodigal	gene	3901589	3902281	.	-	.	ID=GCA000010485_03825_gene;locus_tag=GCA000010485_03825;gene=yieP
contig_1	Pyrodigal	CDS	3901589	3902281	.	-	0	ID=GCA000010485_03825;Name=putative HTH-type transcriptional regulator YieP;locus_tag=GCA000010485_03825;product=putative HTH-type transcriptional regulator YieP;Dbxref=GO:0003677,GO:0003700,GO:0005829;gene=yieP;Parent=GCA000010485_03825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,KEGG:K19776,RefSeq:WP_001131164.1,SO:0001217,UniParc:UPI00000D0672,UniRef:UniRef100_P31475,UniRef:UniRef50_P31475,UniRef:UniRef90_P31475
contig_1	Infernal	gene	3902762	3904303	.	+	.	ID=GCA000010485_03826_gene;locus_tag=GCA000010485_03826;gene=rrs
contig_1	Infernal	rRNA	3902762	3904303	6.2e-48	+	.	ID=GCA000010485_03826;Name=16S ribosomal RNA;locus_tag=GCA000010485_03826;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_03826_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	3904389	3904464	.	+	.	ID=GCA000010485_03827_gene;locus_tag=GCA000010485_03827;gene=trnE
contig_1	tRNAscan-SE	tRNA	3904389	3904464	.	+	.	ID=GCA000010485_03827;Name=tRNA-Glu(ttc);locus_tag=GCA000010485_03827;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000010485_03827_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	3904542	3904650	.	+	.	ID=GCA000010485_03828_gene;locus_tag=GCA000010485_03828;gene=StyR-44
contig_1	Infernal	ncRNA	3904542	3904650	2.3e-21	+	.	ID=GCA000010485_03828;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_03828;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_03828_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	Infernal	gene	3904658	3907561	.	+	.	ID=GCA000010485_03829_gene;locus_tag=GCA000010485_03829;gene=rrl
contig_1	Infernal	rRNA	3904658	3907561	5.4e-06	+	.	ID=GCA000010485_03829;Name=23S ribosomal RNA;locus_tag=GCA000010485_03829;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_03829_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	3907664	3907779	.	+	.	ID=GCA000010485_03830_gene;locus_tag=GCA000010485_03830;gene=rrf
contig_1	Infernal	rRNA	3907664	3907779	2e-15	+	.	ID=GCA000010485_03830;Name=5S ribosomal RNA;locus_tag=GCA000010485_03830;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_03830_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	3907834	3907910	.	+	.	ID=GCA000010485_03831_gene;locus_tag=GCA000010485_03831;gene=trnD
contig_1	tRNAscan-SE	tRNA	3907834	3907910	.	+	.	ID=GCA000010485_03831;Name=tRNA-Asp(gtc);locus_tag=GCA000010485_03831;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000010485_03831_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	3907919	3907994	.	+	.	ID=GCA000010485_03832_gene;locus_tag=GCA000010485_03832;gene=trnW
contig_1	tRNAscan-SE	tRNA	3907919	3907994	.	+	.	ID=GCA000010485_03832;Name=tRNA-Trp(cca);locus_tag=GCA000010485_03832;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000010485_03832_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	Pyrodigal	gene	3908090	3908929	.	-	.	ID=GCA000010485_03833_gene;locus_tag=GCA000010485_03833;gene=hdfR
contig_1	Pyrodigal	CDS	3908090	3908929	.	-	0	ID=GCA000010485_03833;Name=HTH-type transcriptional regulator HdfR;locus_tag=GCA000010485_03833;product=HTH-type transcriptional regulator HdfR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0045892;gene=hdfR;Parent=GCA000010485_03833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000379257.1,SO:0001217,UniParc:UPI000012C3BC,UniRef:UniRef100_B7MGH6,UniRef:UniRef50_P0A8R9,UniRef:UniRef90_P0A8R9
contig_1	Pyrodigal	gene	3909048	3909386	.	+	.	ID=GCA000010485_03834_gene;locus_tag=GCA000010485_03834;gene=yifE
contig_1	Pyrodigal	CDS	3909048	3909386	.	+	0	ID=GCA000010485_03834;Name=macrodomain Ori organization protein MaoP;locus_tag=GCA000010485_03834;product=macrodomain Ori organization protein MaoP;Dbxref=GO:0005829,GO:0007059,GO:0044010,GO:0051276;gene=yifE;Parent=GCA000010485_03834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000841001,COG:COG3085,COG:S,KEGG:K09897,RefSeq:WP_000841001.1,SO:0001217,UniParc:UPI0000163A3F,UniRef:UniRef100_P0ADN2,UniRef:UniRef50_P0ADN2,UniRef:UniRef90_P0ADN2
contig_1	Pyrodigal	gene	3909411	3910931	.	-	.	ID=GCA000010485_03835_gene;locus_tag=GCA000010485_03835;gene=yifB
contig_1	Pyrodigal	CDS	3909411	3910931	.	-	0	ID=GCA000010485_03835;Name=YifB family Mg chelatase-like AAA ATPase;locus_tag=GCA000010485_03835;product=YifB family Mg chelatase-like AAA ATPase;Dbxref=GO:0004176,GO:0005524,GO:0016887;gene=yifB;Parent=GCA000010485_03835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000058957.1,SO:0001217,UniParc:UPI00005EFD31,UniRef:UniRef100_E2QHU6,UniRef:UniRef50_P22787,UniRef:UniRef90_P22787
contig_1	Infernal	regulatory_region	3911213	3911502	3.6e-19	+	.	ID=EFPPCJGBKI_294;Name=Soft rot Enterobacteriaceae Rev 39 5'UTR;product=Soft rot Enterobacteriaceae Rev 39 5'UTR;Dbxref=RFAM:RF02744;inference=profile:Rfam:RF02744;Note=SO:0005836;regulatory_class=other
contig_1	Bakta	gene	3911469	3911519	.	+	.	ID=GCA000010485_03836_gene;locus_tag=GCA000010485_03836;inference=ab initio prediction:Bakta;gene=ilvX
contig_1	Bakta	CDS	3911469	3911519	.	+	0	ID=GCA000010485_03836;Name=putative protein IlvX;locus_tag=GCA000010485_03836;product=putative protein IlvX;gene=ilvX;Parent=GCA000010485_03836_gene;Note=RefSeq:WP_001387183.1,SO:0001217,UniParc:UPI000199A555,UniRef:UniRef100_C1P619,UniRef:UniRef50_C1P619,UniRef:UniRef90_C1P619
contig_1	Pyrodigal	gene	3911522	3913168	.	+	.	ID=GCA000010485_03837_gene;locus_tag=GCA000010485_03837;gene=ilvG
contig_1	Pyrodigal	CDS	3911522	3913168	.	+	0	ID=GCA000010485_03837;Name=acetolactate synthase 2 catalytic subunit;locus_tag=GCA000010485_03837;product=acetolactate synthase 2 catalytic subunit;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvG;Parent=GCA000010485_03837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,RefSeq:WP_001012583.1,SO:0001217,UniParc:UPI0001C22D6C,UniRef:UniRef100_A0A641DY51,UniRef:UniRef50_P0DP90,UniRef:UniRef90_P0DP90;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3913165	3913428	.	+	.	ID=GCA000010485_03838_gene;locus_tag=GCA000010485_03838
contig_1	Pyrodigal	CDS	3913165	3913428	.	+	0	ID=GCA000010485_03838;Name=Acetolactate synthase isozyme 2 small subunit;locus_tag=GCA000010485_03838;product=Acetolactate synthase isozyme 2 small subunit;Parent=GCA000010485_03838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000983255.1,SO:0001217,UniParc:UPI000004FA1F,UniRef:UniRef100_P0ADG1,UniRef:UniRef90_P0ADG1
contig_1	Pyrodigal	gene	3913448	3914377	.	+	.	ID=GCA000010485_03839_gene;locus_tag=GCA000010485_03839;gene=ilvE
contig_1	Pyrodigal	CDS	3913448	3914377	.	+	0	ID=GCA000010485_03839;Name=branched-chain-amino-acid transaminase;locus_tag=GCA000010485_03839;product=branched-chain-amino-acid transaminase;Dbxref=GO:0004084,GO:0005829,GO:0006532,GO:0009081,GO:0009097,GO:0009098,GO:0009099,GO:0052655,GO:0052656;gene=ilvE;Parent=GCA000010485_03839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_000208520.1,SO:0001217,UniParc:UPI0000111CDC,UniRef:UniRef100_P0AB80,UniRef:UniRef50_P0AB80,UniRef:UniRef90_P0AB80;ec_number=2.6.1.42
contig_1	Pyrodigal	gene	3914442	3916292	.	+	.	ID=GCA000010485_03840_gene;locus_tag=GCA000010485_03840;gene=ilvD
contig_1	Pyrodigal	CDS	3914442	3916292	.	+	0	ID=GCA000010485_03840;Name=dihydroxy-acid dehydratase;locus_tag=GCA000010485_03840;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0016836,GO:0051537;gene=ilvD;Parent=GCA000010485_03840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_001127374.1,SO:0001217,UniParc:UPI0001C22D6D,UniRef:UniRef100_A0A3K0K1N9,UniRef:UniRef50_P05791,UniRef:UniRef90_P05791;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	3916292	3917839	.	+	.	ID=GCA000010485_03841_gene;locus_tag=GCA000010485_03841;gene=ilvA
contig_1	Pyrodigal	CDS	3916292	3917839	.	+	0	ID=GCA000010485_03841;Name=threonine ammonia-lyase%2C biosynthetic;locus_tag=GCA000010485_03841;product=threonine ammonia-lyase%2C biosynthetic;Dbxref=GO:0003941,GO:0004794,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000010485_03841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,SO:0001217,UniParc:UPI0000D50DD7,UniRef:UniRef100_A0A066T6Z6,UniRef:UniRef50_P04968,UniRef:UniRef90_P20506;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	3917836	3918795	.	-	.	ID=GCA000010485_03842_gene;locus_tag=GCA000010485_03842;gene=ilvY
contig_1	Pyrodigal	CDS	3917836	3918795	.	-	0	ID=GCA000010485_03842;Name=HTH-type transcriptional activator IlvY;locus_tag=GCA000010485_03842;product=HTH-type transcriptional activator IlvY;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0008652,GO:0009082;gene=ilvY;Parent=GCA000010485_03842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,SO:0001217,UniParc:UPI0002A2D677,UniRef:UniRef100_A0A2X1MS03,UniRef:UniRef50_P0A2Q2,UniRef:UniRef90_P0A2Q2
contig_1	Pyrodigal	gene	3918876	3920351	.	+	.	ID=GCA000010485_03843_gene;locus_tag=GCA000010485_03843;gene=ilvC
contig_1	Pyrodigal	CDS	3918876	3920351	.	+	0	ID=GCA000010485_03843;Name=ketol-acid reductoisomerase;locus_tag=GCA000010485_03843;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009082,GO:0009097,GO:0009099;gene=ilvC;Parent=GCA000010485_03843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0059,COG:EH,KEGG:K00053,RefSeq:WP_001296589.1,SO:0001217,UniParc:UPI0000E444BF,UniRef:UniRef100_B7UMN1,UniRef:UniRef50_P05793,UniRef:UniRef90_P05793;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	3920397	3920678	.	-	.	ID=GCA000010485_03844_gene;locus_tag=GCA000010485_03844;gene=ppiC
contig_1	Pyrodigal	CDS	3920397	3920678	.	-	0	ID=GCA000010485_03844;Name=peptidylprolyl isomerase PpiC;locus_tag=GCA000010485_03844;product=peptidylprolyl isomerase PpiC;Dbxref=GO:0003755,GO:0005737,GO:0140839,GO:0140840;gene=ppiC;Parent=GCA000010485_03844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001096806,COG:COG0760,COG:O,RefSeq:WP_001140251.1,SO:0001217,UniParc:UPI0000165537,UniRef:UniRef100_P0A9L5,UniRef:UniRef50_P0A9L5,UniRef:UniRef90_P0A9L5;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	3920765	3922786	.	+	.	ID=GCA000010485_03845_gene;locus_tag=GCA000010485_03845;gene=rep
contig_1	Pyrodigal	CDS	3920765	3922786	.	+	0	ID=GCA000010485_03845;Name=DNA helicase Rep;locus_tag=GCA000010485_03845;product=DNA helicase Rep;Dbxref=GO:0000725,GO:0003678,GO:0003689,GO:0003697,GO:0005524,GO:0005829,GO:0006268,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=rep;Parent=GCA000010485_03845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,KEGG:K03656,RefSeq:WP_001238904.1,SO:0001217,UniParc:UPI0001C22D6E,UniRef:UniRef100_A0A3K0K1M9,UniRef:UniRef50_P09980,UniRef:UniRef90_P09980;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3922833	3924317	.	-	.	ID=GCA000010485_03846_gene;locus_tag=GCA000010485_03846;gene=gppA
contig_1	Pyrodigal	CDS	3922833	3924317	.	-	0	ID=GCA000010485_03846;Name=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;locus_tag=GCA000010485_03846;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;Dbxref=GO:0008894,GO:0015949,GO:0015970,GO:0015974;gene=gppA;Parent=GCA000010485_03846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0248,COG:FT,KEGG:K01524,RefSeq:WP_001545697.1,SO:0001217,UniParc:UPI0001C22C3C,UniRef:UniRef100_A0A7I0KW80,UniRef:UniRef50_P25552,UniRef:UniRef90_P25552;ec_number=3.6.1.40
contig_1	Pyrodigal	gene	3924453	3925718	.	-	.	ID=GCA000010485_03847_gene;locus_tag=GCA000010485_03847;gene=rhlB
contig_1	Pyrodigal	CDS	3924453	3925718	.	-	0	ID=GCA000010485_03847;Name=ATP-dependent RNA helicase RhlB;locus_tag=GCA000010485_03847;product=ATP-dependent RNA helicase RhlB;Dbxref=GO:0003676,GO:0003689,GO:0003723,GO:0003724,GO:0005524,GO:0005829,GO:0006396,GO:0006401,GO:0016020,GO:0016887,GO:0042803,GO:0061775,GO:0097718,GO:0140584,GO:0140665,GO:0140849,GO:1990061;gene=rhlB;Parent=GCA000010485_03847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_000047499.1,SO:0001217,UniParc:UPI0000163A40,UniRef:UniRef100_P0A8J8,UniRef:UniRef50_P0A8J8,UniRef:UniRef90_P0A8J8;ec_number=3.6.4.13
contig_1	Infernal	regulatory_region	3925779	3925878	6.4e-12	+	.	ID=EFPPCJGBKI_318;Name=TrxA 5' UTR thermometer;product=TrxA 5' UTR thermometer;Dbxref=RFAM:RF02773;inference=profile:Rfam:RF02773;Note=SO:0002168;regulatory_class=response_element
contig_1	Pyrodigal	gene	3925849	3926178	.	+	.	ID=GCA000010485_03848_gene;locus_tag=GCA000010485_03848;gene=trxA
contig_1	Pyrodigal	CDS	3925849	3926178	.	+	0	ID=GCA000010485_03848;Name=thioredoxin TrxA;locus_tag=GCA000010485_03848;product=thioredoxin TrxA;Dbxref=GO:0005737,GO:0005829,GO:0006662,GO:0015035,GO:0030337,GO:0045454;gene=trxA;Parent=GCA000010485_03848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,KEGG:K06113,RefSeq:WP_001280776.1,SO:0001217,UniParc:UPI000003112A,UniRef:UniRef100_P0AA25,UniRef:UniRef50_P0AA25,UniRef:UniRef90_P0AA25;ec_number=3.2.1.99
contig_1	Pyrodigal	gene	3926505	3927764	.	+	.	ID=GCA000010485_03849_gene;locus_tag=GCA000010485_03849;gene=rho
contig_1	Pyrodigal	CDS	3926505	3927764	.	+	0	ID=GCA000010485_03849;Name=transcription termination factor Rho;locus_tag=GCA000010485_03849;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0004386,GO:0005524,GO:0005829,GO:0006353,GO:0008186,GO:0016020,GO:0016887,GO:0042802;gene=rho;Parent=GCA000010485_03849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,RefSeq:WP_001054527.1,SO:0001217,UniParc:UPI000013389B,UniRef:UniRef100_P0AG30,UniRef:UniRef50_P0AG30,UniRef:UniRef90_P0AG30;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	3928004	3929107	.	+	.	ID=GCA000010485_03850_gene;locus_tag=GCA000010485_03850;gene=wecA
contig_1	Pyrodigal	CDS	3928004	3929107	.	+	0	ID=GCA000010485_03850;Name=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;locus_tag=GCA000010485_03850;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;Dbxref=GO:0000287,GO:0005886,GO:0009103,GO:0009243,GO:0009246,GO:0009276,GO:0016020,GO:0016757,GO:0016780,GO:0030145,GO:0036380,GO:0044038,GO:0071555;gene=wecA;Parent=GCA000010485_03850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_001050976.1,SO:0001217,UniParc:UPI0001C22C3E,UniRef:UniRef100_A0A7I0KW78,UniRef:UniRef50_P0AC78,UniRef:UniRef90_P0AC78;ec_number=2.7.8.33
contig_1	Pyrodigal	gene	3929119	3930165	.	+	.	ID=GCA000010485_03851_gene;locus_tag=GCA000010485_03851;gene=wzzE
contig_1	Pyrodigal	CDS	3929119	3930165	.	+	0	ID=GCA000010485_03851;Name=ECA polysaccharide chain length modulation protein;locus_tag=GCA000010485_03851;product=ECA polysaccharide chain length modulation protein;Dbxref=GO:0004713,GO:0005886,GO:0009103,GO:0009246,GO:0016020;gene=wzzE;Parent=GCA000010485_03851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05790,RefSeq:WP_001296591.1,SO:0001217,UniParc:UPI00016A1162,UniRef:UniRef100_A0A061K4T7,UniRef:UniRef50_P0AG00,UniRef:UniRef90_O33789
contig_1	Pyrodigal	gene	3930221	3931351	.	+	.	ID=GCA000010485_03852_gene;locus_tag=GCA000010485_03852;gene=wecB
contig_1	Pyrodigal	CDS	3930221	3931351	.	+	0	ID=GCA000010485_03852;Name=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;locus_tag=GCA000010485_03852;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;Dbxref=GO:0005829,GO:0008761,GO:0009246,GO:0042803;gene=wecB;Parent=GCA000010485_03852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0381,COG:M,KEGG:K01791,RefSeq:WP_000866670.1,SO:0001217,UniParc:UPI0000673E2F,UniRef:UniRef100_E2QHW2,UniRef:UniRef50_P27828,UniRef:UniRef90_P27828;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	3931348	3932610	.	+	.	ID=GCA000010485_03853_gene;locus_tag=GCA000010485_03853;gene=wecC
contig_1	Pyrodigal	CDS	3931348	3932610	.	+	0	ID=GCA000010485_03853;Name=UDP-N-acetyl-D-mannosamine dehydrogenase;locus_tag=GCA000010485_03853;product=UDP-N-acetyl-D-mannosamine dehydrogenase;Dbxref=GO:0009246,GO:0016628,GO:0051287,GO:0089714;gene=wecC;Parent=GCA000010485_03853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0677,COG:M,KEGG:K02472,RefSeq:WP_000006608.1,SO:0001217,UniParc:UPI0001C22C3F,UniRef:UniRef100_A0A066SYR2,UniRef:UniRef50_P27829,UniRef:UniRef90_P27829;ec_number=1.1.1.336
contig_1	Pyrodigal	gene	3932610	3933677	.	+	.	ID=GCA000010485_03854_gene;locus_tag=GCA000010485_03854;gene=rffG
contig_1	Pyrodigal	CDS	3932610	3933677	.	+	0	ID=GCA000010485_03854;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000010485_03854;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009103,GO:0009225,GO:0009246,GO:0045226;gene=rffG;Parent=GCA000010485_03854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001226629.1,SO:0001217,UniParc:UPI0001C22C40,UniRef:UniRef100_A0A066T2U4,UniRef:UniRef50_P27830,UniRef:UniRef90_P27830;ec_number=4.2.1.46
contig_1	Pyrodigal	gene	3933696	3934577	.	+	.	ID=GCA000010485_03855_gene;locus_tag=GCA000010485_03855;gene=rfbA
contig_1	Pyrodigal	CDS	3933696	3934577	.	+	0	ID=GCA000010485_03855;Name=glucose-1-phosphate thymidylyltransferase RfbA;locus_tag=GCA000010485_03855;product=glucose-1-phosphate thymidylyltransferase RfbA;Dbxref=GO:0000271,GO:0008879,GO:0009246,GO:0019305,GO:0045226,GO:0046872;gene=rfbA;Parent=GCA000010485_03855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1209,COG:M,KEGG:K00973,RefSeq:WP_000676056.1,SO:0001217,UniParc:UPI00001337FD,UniRef:UniRef100_P61887,UniRef:UniRef50_P37744,UniRef:UniRef90_P61887;ec_number=2.7.7.24
contig_1	Pyrodigal	gene	3934555	3935229	.	+	.	ID=GCA000010485_03856_gene;locus_tag=GCA000010485_03856;gene=rffC
contig_1	Pyrodigal	CDS	3934555	3935229	.	+	0	ID=GCA000010485_03856;Name=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;locus_tag=GCA000010485_03856;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;Dbxref=GO:0008080,GO:0009246;gene=rffC;Parent=GCA000010485_03856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001145166.1,SO:0001217,UniParc:UPI0001E8A97A,UniRef:UniRef100_A0A061K4T4,UniRef:UniRef50_Q8FBQ3,UniRef:UniRef90_Q8FBQ3;ec_number=2.3.1.210
contig_1	Pyrodigal	gene	3935234	3936364	.	+	.	ID=GCA000010485_03857_gene;locus_tag=GCA000010485_03857;gene=rffA
contig_1	Pyrodigal	CDS	3935234	3936364	.	+	0	ID=GCA000010485_03857;Name=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;locus_tag=GCA000010485_03857;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;Dbxref=GO:0000271,GO:0009246,GO:0019180,GO:0030170,GO:0042802;gene=rffA;Parent=GCA000010485_03857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0399,COG:M,KEGG:K02805,RefSeq:WP_000612067.1,SO:0001217,UniParc:UPI0001C22C42,UniRef:UniRef100_A0A061K251,UniRef:UniRef50_P27833,UniRef:UniRef90_P27833;ec_number=2.6.1.59
contig_1	Pyrodigal	gene	3936366	3937616	.	+	.	ID=GCA000010485_03858_gene;locus_tag=GCA000010485_03858;gene=wzxE
contig_1	Pyrodigal	CDS	3936366	3937616	.	+	0	ID=GCA000010485_03858;Name=lipid III flippase WzxE;locus_tag=GCA000010485_03858;product=lipid III flippase WzxE;Dbxref=GO:0005886,GO:0009246,GO:0016020;gene=wzxE;Parent=GCA000010485_03858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2244,COG:M,KEGG:K16693,RefSeq:WP_000050265.1,SO:0001217,UniParc:UPI000003EB21,UniRef:UniRef100_P0AAA7,UniRef:UniRef50_P0AAA7,UniRef:UniRef90_P0AAA7
contig_1	Pyrodigal	gene	3937613	3938692	.	+	.	ID=GCA000010485_03859_gene;locus_tag=GCA000010485_03859;gene=rffT
contig_1	Pyrodigal	CDS	3937613	3938692	.	+	0	ID=GCA000010485_03859;Name=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;locus_tag=GCA000010485_03859;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;Dbxref=GO:0005886,GO:0008417,GO:0009246,GO:0036065,GO:0102031;gene=rffT;Parent=GCA000010485_03859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12582,RefSeq:WP_000217256.1,SO:0001217,UniParc:UPI0001C22C43,UniRef:UniRef100_A0A066T2U8,UniRef:UniRef50_P56258,UniRef:UniRef90_P56258;ec_number=2.4.1.325
contig_1	Pyrodigal	gene	3938689	3940041	.	+	.	ID=GCA000010485_03860_gene;locus_tag=GCA000010485_03860;gene=wzyE
contig_1	Pyrodigal	CDS	3938689	3940041	.	+	0	ID=GCA000010485_03860;Name=ECA oligosaccharide polymerase;locus_tag=GCA000010485_03860;product=ECA oligosaccharide polymerase;Dbxref=GO:0005886,GO:0009246,GO:0016020;gene=wzyE;Parent=GCA000010485_03860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02853,RefSeq:WP_000055112.1,SO:0001217,UniParc:UPI0001C22C44,UniRef:UniRef100_A0A061YCN5,UniRef:UniRef50_P27835,UniRef:UniRef90_P27835;ec_number=2.4.99.27
contig_1	Pyrodigal	gene	3940044	3940784	.	+	.	ID=GCA000010485_03861_gene;locus_tag=GCA000010485_03861;gene=wecG
contig_1	Pyrodigal	CDS	3940044	3940784	.	+	0	ID=GCA000010485_03861;Name=lipopolysaccharide N-acetylmannosaminouronosyltransferase;locus_tag=GCA000010485_03861;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;Dbxref=GO:0009246,GO:0047241;gene=wecG;Parent=GCA000010485_03861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1922,COG:M,RefSeq:WP_001064038.1,SO:0001217,UniParc:UPI00000DF2CC,UniRef:UniRef100_A7ZTZ8,UniRef:UniRef50_P27836,UniRef:UniRef90_P27836;ec_number=2.4.1.180
contig_1	Pyrodigal	gene	3940975	3942360	.	+	.	ID=GCA000010485_03862_gene;locus_tag=GCA000010485_03862;gene=thrP
contig_1	Pyrodigal	CDS	3940975	3942360	.	+	0	ID=GCA000010485_03862;Name=bifunctional threonine/serine APC transporter ThrP;locus_tag=GCA000010485_03862;product=bifunctional threonine/serine APC transporter ThrP;Dbxref=GO:0005886,GO:0006865,GO:0015194,GO:0015195,GO:0055085;gene=thrP;Parent=GCA000010485_03862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000774733.1,SO:0001217,UniParc:UPI000187C13F,UniRef:UniRef100_A0A066SZ34,UniRef:UniRef50_P27837,UniRef:UniRef90_P27837
contig_1	tRNAscan-SE	gene	3942463	3942539	.	+	.	ID=GCA000010485_03863_gene;locus_tag=GCA000010485_03863;gene=trnR
contig_1	tRNAscan-SE	tRNA	3942463	3942539	.	+	.	ID=GCA000010485_03863;Name=tRNA-Arg(ccg);locus_tag=GCA000010485_03863;product=tRNA-Arg(ccg);gene=trnR;anti_codon=ccg;amino_acid=Arg;Parent=GCA000010485_03863_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	3942598	3942673	.	+	.	ID=GCA000010485_03864_gene;locus_tag=GCA000010485_03864;gene=trnH
contig_1	tRNAscan-SE	tRNA	3942598	3942673	.	+	.	ID=GCA000010485_03864;Name=tRNA-His(gtg);locus_tag=GCA000010485_03864;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000010485_03864_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	3942694	3942780	.	+	.	ID=GCA000010485_03865_gene;locus_tag=GCA000010485_03865;gene=trnL
contig_1	tRNAscan-SE	tRNA	3942694	3942780	.	+	.	ID=GCA000010485_03865;Name=tRNA-Leu(cag);locus_tag=GCA000010485_03865;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA000010485_03865_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	3942823	3942899	.	+	.	ID=GCA000010485_03866_gene;locus_tag=GCA000010485_03866;gene=trnP
contig_1	tRNAscan-SE	tRNA	3942823	3942899	.	+	.	ID=GCA000010485_03866;Name=tRNA-Pro(tgg);locus_tag=GCA000010485_03866;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000010485_03866_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	Pyrodigal	gene	3943046	3944281	.	+	.	ID=GCA000010485_03867_gene;locus_tag=GCA000010485_03867;gene=aslB
contig_1	Pyrodigal	CDS	3943046	3944281	.	+	0	ID=GCA000010485_03867;Name=anaerobic sulfatase maturase;locus_tag=GCA000010485_03867;product=anaerobic sulfatase maturase;Dbxref=GO:0016491,GO:0018209,GO:0046500,GO:0046872,GO:0051539,GO:0051604;gene=aslB;Parent=GCA000010485_03867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24118,RefSeq:WP_001187384.1,SO:0001217,UniParc:UPI0001C22C45,UniRef:UniRef100_A0A7I0KW61,UniRef:UniRef50_P25550,UniRef:UniRef90_P25550;ec_number=1.1.98.7
contig_1	Pyrodigal	gene	3944372	3946027	.	-	.	ID=GCA000010485_03868_gene;locus_tag=GCA000010485_03868;gene=aslA
contig_1	Pyrodigal	CDS	3944372	3946027	.	-	0	ID=GCA000010485_03868;Name=arylsulfatase AslA;locus_tag=GCA000010485_03868;product=arylsulfatase AslA;Dbxref=GO:0004065,GO:0042597,GO:0046872;gene=aslA;Parent=GCA000010485_03868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000395863,COG:COG3119,COG:P,RefSeq:WP_000395838.1,SO:0001217,UniParc:UPI0001C22C46,UniRef:UniRef100_A0A066T2V3,UniRef:UniRef50_P25549,UniRef:UniRef90_P25549;ec_number=3.1.6.-
contig_1	Infernal	gene	3946452	3946658	.	+	.	ID=GCA000010485_03869_gene;locus_tag=GCA000010485_03869;gene=GlmZ_SraJ
contig_1	Infernal	ncRNA	3946452	3946658	2e-33	+	.	ID=GCA000010485_03869;Name=GlmZ RNA activator of glmS mRNA;locus_tag=GCA000010485_03869;product=GlmZ RNA activator of glmS mRNA;Dbxref=RFAM:RF00083;Parent=GCA000010485_03869_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00083
contig_1	Infernal	gene	3946454	3946602	.	+	.	ID=GCA000010485_03870_gene;locus_tag=GCA000010485_03870;gene=GlmY_tke1
contig_1	Infernal	ncRNA	3946454	3946602	8e-11	+	.	ID=GCA000010485_03870;Name=Glm Y RNA activator of glmS mRNA;locus_tag=GCA000010485_03870;product=Glm Y RNA activator of glmS mRNA;Dbxref=RFAM:RF00128;Parent=GCA000010485_03870_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00128
contig_1	Pyrodigal	gene	3946657	3947247	.	-	.	ID=GCA000010485_03871_gene;locus_tag=GCA000010485_03871
contig_1	Pyrodigal	CDS	3946657	3947247	.	-	0	ID=GCA000010485_03871;Name=Carrier domain-containing protein;locus_tag=GCA000010485_03871;product=Carrier domain-containing protein;Parent=GCA000010485_03871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001260226.1,SO:0001217,UniParc:UPI0001E172D5,UniRef:UniRef100_A0A061Y613,UniRef:UniRef50_B7LU57,UniRef:UniRef90_A0A776Y508
contig_1	Pyrodigal	gene	3947297	3948493	.	-	.	ID=GCA000010485_03872_gene;locus_tag=GCA000010485_03872;gene=hemY
contig_1	Pyrodigal	CDS	3947297	3948493	.	-	0	ID=GCA000010485_03872;Name=protoheme IX biogenesis protein HemY;locus_tag=GCA000010485_03872;product=protoheme IX biogenesis protein HemY;Dbxref=GO:0005515,GO:0005886,GO:0006779,GO:0016020,GO:0042168;gene=hemY;Parent=GCA000010485_03872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3071,COG:S,RefSeq:WP_000921791.1,SO:0001217,UniParc:UPI000012C5C6,UniRef:UniRef100_P0ACB7,UniRef:UniRef50_P0ACB7,UniRef:UniRef90_P0ACB7
contig_1	Pyrodigal	gene	3948496	3949713	.	-	.	ID=GCA000010485_03873_gene;locus_tag=GCA000010485_03873;gene=hemX
contig_1	Pyrodigal	CDS	3948496	3949713	.	-	0	ID=GCA000010485_03873;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000010485_03873;product=uroporphyrinogen-III C-methyltransferase;Dbxref=GO:0005886;gene=hemX;Parent=GCA000010485_03873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2959,COG:R,KEGG:K02496,RefSeq:WP_000139091.1,SO:0001217,UniParc:UPI00000DF2D0,UniRef:UniRef100_B7UNB8,UniRef:UniRef50_P09127,UniRef:UniRef90_P09127;ec_number=2.1.1.107
contig_1	Pyrodigal	gene	3949735	3950475	.	-	.	ID=GCA000010485_03874_gene;locus_tag=GCA000010485_03874;gene=hemD
contig_1	Pyrodigal	CDS	3949735	3950475	.	-	0	ID=GCA000010485_03874;Name=uroporphyrinogen-III synthase;locus_tag=GCA000010485_03874;product=uroporphyrinogen-III synthase;Dbxref=GO:0004852,GO:0006780,GO:0006782;gene=hemD;Parent=GCA000010485_03874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1587,COG:H,RefSeq:WP_000026072.1,SO:0001217,UniParc:UPI0001C22C48,UniRef:UniRef100_A0A061YCB4,UniRef:UniRef50_P09126,UniRef:UniRef90_P09126;ec_number=4.2.1.75
contig_1	Pyrodigal	gene	3950472	3951434	.	-	.	ID=GCA000010485_03875_gene;locus_tag=GCA000010485_03875;gene=hemC
contig_1	Pyrodigal	CDS	3950472	3951434	.	-	0	ID=GCA000010485_03875;Name=hydroxymethylbilane synthase;locus_tag=GCA000010485_03875;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0005737,GO:0006782,GO:0033014;gene=hemC;Parent=GCA000010485_03875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,SO:0001217,UniParc:UPI000209C735,UniRef:UniRef100_A0A066T728,UniRef:UniRef50_P06983,UniRef:UniRef90_P06983;ec_number=2.5.1.61
contig_1	Pyrodigal	gene	3951800	3954346	.	+	.	ID=GCA000010485_03876_gene;locus_tag=GCA000010485_03876;gene=cyaA
contig_1	Pyrodigal	CDS	3951800	3954346	.	+	0	ID=GCA000010485_03876;Name=class I adenylate cyclase;locus_tag=GCA000010485_03876;product=class I adenylate cyclase;Dbxref=GO:0004016,GO:0005524,GO:0005737,GO:0006171;gene=cyaA;Parent=GCA000010485_03876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3072,COG:T,KEGG:K05851,RefSeq:WP_000281682.1,SO:0001217,UniParc:UPI0001C22C4A,UniRef:UniRef100_A0A061K6P2,UniRef:UniRef50_P00936,UniRef:UniRef90_P00936;ec_number=4.6.1.1
contig_1	Pyrodigal	gene	3954386	3954706	.	-	.	ID=GCA000010485_03877_gene;locus_tag=GCA000010485_03877;gene=cyaY
contig_1	Pyrodigal	CDS	3954386	3954706	.	-	0	ID=GCA000010485_03877;Name=iron donor protein CyaY;locus_tag=GCA000010485_03877;product=iron donor protein CyaY;Dbxref=GO:0005506,GO:0005829,GO:0008198,GO:0008199,GO:0016226;gene=cyaY;Parent=GCA000010485_03877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000999936.1,SO:0001217,UniParc:UPI00005E4238,UniRef:UniRef100_B7UNC2,UniRef:UniRef50_P27838,UniRef:UniRef90_B7UNC2
contig_1	Pyrodigal	gene	3954754	3954987	.	-	.	ID=GCA000010485_03878_gene;locus_tag=GCA000010485_03878
contig_1	Pyrodigal	CDS	3954754	3954987	.	-	0	ID=GCA000010485_03878;Name=Lipoprotein;locus_tag=GCA000010485_03878;product=Lipoprotein;Parent=GCA000010485_03878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000DAD0E8,UniRef:UniRef100_A0A1X9VFH5,UniRef:UniRef50_A0A3G3E5J0,UniRef:UniRef90_A0A4Y7YA61
contig_1	Pyrodigal	gene	3955176	3955379	.	+	.	ID=GCA000010485_03879_gene;locus_tag=GCA000010485_03879;gene=lptM
contig_1	Pyrodigal	CDS	3955176	3955379	.	+	0	ID=GCA000010485_03879;Name=LPS translocon maturation chaperone LptM;locus_tag=GCA000010485_03879;product=LPS translocon maturation chaperone LptM;Dbxref=GO:0009279;gene=lptM;Parent=GCA000010485_03879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5567,COG:S,RefSeq:WP_000799889.1,SO:0001217,UniParc:UPI000013B3DC,UniRef:UniRef100_P0ADN6,UniRef:UniRef50_P0ADN6,UniRef:UniRef90_P0ADN6
contig_1	Pyrodigal	gene	3955416	3956240	.	+	.	ID=GCA000010485_03880_gene;locus_tag=GCA000010485_03880;gene=dapF
contig_1	Pyrodigal	CDS	3955416	3956240	.	+	0	ID=GCA000010485_03880;Name=diaminopimelate epimerase;locus_tag=GCA000010485_03880;product=diaminopimelate epimerase;Dbxref=GO:0005829,GO:0008837,GO:0009089;gene=dapF;Parent=GCA000010485_03880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01778,RefSeq:WP_001160654.1,SO:0001217,UniParc:UPI0000128EB0,UniRef:UniRef100_P0A6K1,UniRef:UniRef50_P0A6K1,UniRef:UniRef90_P0A6K1;ec_number=5.1.1.7
contig_1	Pyrodigal	gene	3956237	3956944	.	+	.	ID=GCA000010485_03881_gene;locus_tag=GCA000010485_03881;gene=yigA
contig_1	Pyrodigal	CDS	3956237	3956944	.	+	0	ID=GCA000010485_03881;Name=putative protein YigA;locus_tag=GCA000010485_03881;product=putative protein YigA;gene=yigA;Parent=GCA000010485_03881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3159,COG:S,RefSeq:WP_000812805.1,SO:0001217,UniParc:UPI0001C22C4B,UniRef:UniRef100_A0A7I0KW85,UniRef:UniRef50_P23305,UniRef:UniRef90_P23305
contig_1	Pyrodigal	gene	3956941	3957837	.	+	.	ID=GCA000010485_03882_gene;locus_tag=GCA000010485_03882;gene=xerC
contig_1	Pyrodigal	CDS	3956941	3957837	.	+	0	ID=GCA000010485_03882;Name=tyrosine recombinase XerC;locus_tag=GCA000010485_03882;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006276,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0015074,GO:0042150,GO:0048476,GO:0051301,GO:0071139;gene=xerC;Parent=GCA000010485_03882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000132874,BlastRules:WP_000141123,COG:COG4973,COG:L,RefSeq:WP_000130676.1,SO:0001217,UniParc:UPI0000D50DEE,UniRef:UniRef100_B7MH75,UniRef:UniRef50_P0A8P6,UniRef:UniRef90_P0A8P6
contig_1	Pyrodigal	gene	3957837	3958553	.	+	.	ID=GCA000010485_03883_gene;locus_tag=GCA000010485_03883;gene=yigB
contig_1	Pyrodigal	CDS	3957837	3958553	.	+	0	ID=GCA000010485_03883;Name=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;locus_tag=GCA000010485_03883;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;Dbxref=GO:0000287,GO:0009231,GO:0016311,GO:0016791;gene=yigB;Parent=GCA000010485_03883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_001213586.1,SO:0001217,UniParc:UPI0000D50DEF,UniRef:UniRef100_A0A0D6J0E0,UniRef:UniRef50_P0ADP0,UniRef:UniRef90_P0ADP0;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	3958637	3960799	.	+	.	ID=GCA000010485_03884_gene;locus_tag=GCA000010485_03884;gene=uvrD
contig_1	Pyrodigal	CDS	3958637	3960799	.	+	0	ID=GCA000010485_03884;Name=DNA helicase II;locus_tag=GCA000010485_03884;product=DNA helicase II;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005829,GO:0006268,GO:0009378,GO:0009432,GO:0016787,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=uvrD;Parent=GCA000010485_03884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,RefSeq:WP_000383407.1,SO:0001217,UniParc:UPI00000D08F3,UniRef:UniRef100_C3SKC2,UniRef:UniRef50_P03018,UniRef:UniRef90_P03018;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3960854	3961756	.	-	.	ID=GCA000010485_03885_gene;locus_tag=GCA000010485_03885
contig_1	Pyrodigal	CDS	3960854	3961756	.	-	0	ID=GCA000010485_03885;Name=Adenosyl-chloride synthase;locus_tag=GCA000010485_03885;product=Adenosyl-chloride synthase;Parent=GCA000010485_03885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1912,COG:HV,RefSeq:WP_000751617.1,SO:0001217,UniParc:UPI00005AABC1,UniRef:UniRef100_E2QHY7,UniRef:UniRef50_A0A0H0E2L1,UniRef:UniRef90_A0A0H0E2L1
contig_1	Pyrodigal	gene	3961839	3962603	.	-	.	ID=GCA000010485_03886_gene;locus_tag=GCA000010485_03886;gene=yigE
contig_1	Pyrodigal	CDS	3961839	3962603	.	-	0	ID=GCA000010485_03886;Name=putative protein YigE;locus_tag=GCA000010485_03886;product=putative protein YigE;gene=yigE;Parent=GCA000010485_03886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3698,COG:S,RefSeq:WP_000951145.1,SO:0001217,UniParc:UPI0001C22F18,UniRef:UniRef100_A0A7I0KW68,UniRef:UniRef50_P27840,UniRef:UniRef90_P27840
contig_1	Pyrodigal	gene	3962973	3963923	.	+	.	ID=GCA000010485_03887_gene;locus_tag=GCA000010485_03887;gene=corA
contig_1	Pyrodigal	CDS	3962973	3963923	.	+	0	ID=GCA000010485_03887;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000010485_03887;product=magnesium/cobalt transporter CorA;Dbxref=GO:0005886,GO:0006824,GO:0015087,GO:0015095,GO:0015099,GO:0015693,GO:0016020;gene=corA;Parent=GCA000010485_03887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_000947159.1,SO:0001217,UniParc:UPI0000127F09,UniRef:UniRef100_P0ABI4,UniRef:UniRef50_P0A2R8,UniRef:UniRef90_P0A2R8
contig_1	Pyrodigal	gene	3963966	3964346	.	-	.	ID=GCA000010485_03888_gene;locus_tag=GCA000010485_03888
contig_1	Pyrodigal	CDS	3963966	3964346	.	-	0	ID=GCA000010485_03888;Name=DUF2628 domain-containing protein;locus_tag=GCA000010485_03888;product=DUF2628 domain-containing protein;Parent=GCA000010485_03888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000031247.1,SO:0001217,UniParc:UPI0001C22F19,UniRef:UniRef100_A0A061Y9Z4,UniRef:UniRef50_P27842,UniRef:UniRef90_A0A8S0FHF5
contig_1	Pyrodigal	gene	3964361	3964741	.	-	.	ID=GCA000010485_03889_gene;locus_tag=GCA000010485_03889
contig_1	Pyrodigal	CDS	3964361	3964741	.	-	0	ID=GCA000010485_03889;Name=Inner membrane protein;locus_tag=GCA000010485_03889;product=Inner membrane protein;Parent=GCA000010485_03889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001532065.1,SO:0001217,UniParc:UPI0002A3CC7F,UniRef:UniRef100_A0A1U9TW52,UniRef:UniRef50_A0A427UPH3,UniRef:UniRef90_A0A7Z8DYA2
contig_1	Pyrodigal	gene	3964836	3965726	.	-	.	ID=GCA000010485_03890_gene;locus_tag=GCA000010485_03890;gene=rarD
contig_1	Pyrodigal	CDS	3964836	3965726	.	-	0	ID=GCA000010485_03890;Name=EamA family transporter RarD;locus_tag=GCA000010485_03890;product=EamA family transporter RarD;Dbxref=GO:0005886,GO:0016020;gene=rarD;Parent=GCA000010485_03890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,RefSeq:WP_000339102.1,SO:0001217,UniParc:UPI0001C22F1B,UniRef:UniRef100_A0A066T7B5,UniRef:UniRef50_P27844,UniRef:UniRef90_P27844
contig_1	Pyrodigal	gene	3965778	3966245	.	-	.	ID=GCA000010485_03891_gene;locus_tag=GCA000010485_03891;gene=yigI
contig_1	Pyrodigal	CDS	3965778	3966245	.	-	0	ID=GCA000010485_03891;Name=thioesterase family protein;locus_tag=GCA000010485_03891;product=thioesterase family protein;Dbxref=GO:0005737,GO:0006629,GO:0016289;gene=yigI;Parent=GCA000010485_03891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_001277142.1,SO:0001217,UniParc:UPI000013B3E9,UniRef:UniRef100_P0ADP2,UniRef:UniRef50_P0ADP2,UniRef:UniRef90_P0ADP2;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	3966410	3967279	.	+	.	ID=GCA000010485_03892_gene;locus_tag=GCA000010485_03892;gene=pldA
contig_1	Pyrodigal	CDS	3966410	3967279	.	+	0	ID=GCA000010485_03892;Name=phospholipase A;locus_tag=GCA000010485_03892;product=phospholipase A;Dbxref=GO:0004620,GO:0004622,GO:0004623,GO:0005509,GO:0006629,GO:0008970,GO:0009279,GO:0016042,GO:0042803,GO:0046471,GO:0047498,GO:0047499,GO:0052739;gene=pldA;Parent=GCA000010485_03892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2829,COG:M,KEGG:K01058,RefSeq:WP_001259692.1,SO:0001217,UniParc:UPI00000E4A9E,UniRef:UniRef100_E2QHZ4,UniRef:UniRef50_P0A921,UniRef:UniRef90_P0A921;ec_number=3.1.1.4
contig_1	Pyrodigal	gene	3967398	3969233	.	+	.	ID=GCA000010485_03893_gene;locus_tag=GCA000010485_03893;gene=recQ
contig_1	Pyrodigal	CDS	3967398	3969233	.	+	0	ID=GCA000010485_03893;Name=ATP-dependent DNA helicase RecQ;locus_tag=GCA000010485_03893;product=ATP-dependent DNA helicase RecQ;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005694,GO:0005737,GO:0006260,GO:0006281,GO:0006310,GO:0009378,GO:0009432,GO:0016853,GO:0016887,GO:0030894,GO:0032508,GO:0036121,GO:0043138,GO:0043590,GO:0046872,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recQ;Parent=GCA000010485_03893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,SO:0001217,UniParc:UPI00005EFCF5,UniRef:UniRef100_A0A1U9TX01,UniRef:UniRef50_P15043,UniRef:UniRef90_P15043;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3969298	3969918	.	+	.	ID=GCA000010485_03894_gene;locus_tag=GCA000010485_03894;gene=rhtC
contig_1	Pyrodigal	CDS	3969298	3969918	.	+	0	ID=GCA000010485_03894;Name=threonine export protein RhtC;locus_tag=GCA000010485_03894;product=threonine export protein RhtC;Dbxref=GO:0005886,GO:0006865,GO:0015171;gene=rhtC;Parent=GCA000010485_03894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1280,COG:E,KEGG:K05835,RefSeq:WP_000928838.1,SO:0001217,UniParc:UPI0001C22F1C,UniRef:UniRef100_A0A061K4R7,UniRef:UniRef50_P0AG38,UniRef:UniRef90_P0AG38
contig_1	Pyrodigal	gene	3969956	3970816	.	-	.	ID=GCA000010485_03895_gene;locus_tag=GCA000010485_03895
contig_1	Pyrodigal	CDS	3969956	3970816	.	-	0	ID=GCA000010485_03895;Name=Transposase (putative) YhgA-like domain-containing protein;locus_tag=GCA000010485_03895;product=Transposase (putative) YhgA-like domain-containing protein;Parent=GCA000010485_03895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000133649.1,SO:0001217,UniParc:UPI000187C157,UniRef:UniRef100_A0A066T7C1,UniRef:UniRef50_Q32DN3,UniRef:UniRef90_B7LU31
contig_1	Pyrodigal	gene	3970975	3971595	.	-	.	ID=GCA000010485_03896_gene;locus_tag=GCA000010485_03896;gene=rhtB
contig_1	Pyrodigal	CDS	3970975	3971595	.	-	0	ID=GCA000010485_03896;Name=homoserine/homoserine lactone efflux protein;locus_tag=GCA000010485_03896;product=homoserine/homoserine lactone efflux protein;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0042970;gene=rhtB;Parent=GCA000010485_03896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1280,COG:E,KEGG:K05834,RefSeq:WP_000171710.1,SO:0001217,UniParc:UPI00001338B5,UniRef:UniRef100_P0AG34,UniRef:UniRef50_P0AG34,UniRef:UniRef90_P0AG34
contig_1	Pyrodigal	gene	3971706	3972728	.	+	.	ID=GCA000010485_03897_gene;locus_tag=GCA000010485_03897;gene=pldB
contig_1	Pyrodigal	CDS	3971706	3972728	.	+	0	ID=GCA000010485_03897;Name=lysophospholipase L2;locus_tag=GCA000010485_03897;product=lysophospholipase L2;Dbxref=GO:0004622,GO:0005886,GO:0006650,GO:0016020,GO:0016747;gene=pldB;Parent=GCA000010485_03897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_000487669.1,SO:0001217,UniParc:UPI000187C158,UniRef:UniRef100_A0A066SYV4,UniRef:UniRef50_P07000,UniRef:UniRef90_P07000;ec_number=3.1.1.5
contig_1	Pyrodigal	gene	3972736	3973536	.	+	.	ID=GCA000010485_03898_gene;locus_tag=GCA000010485_03898;gene=yigL
contig_1	Pyrodigal	CDS	3972736	3973536	.	+	0	ID=GCA000010485_03898;Name=sugar/pyridoxal phosphate phosphatase YigL;locus_tag=GCA000010485_03898;product=sugar/pyridoxal phosphate phosphatase YigL;gene=yigL;Parent=GCA000010485_03898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21064,RefSeq:WP_000285360.1,SO:0001217,UniParc:UPI000191EC73,UniRef:UniRef100_E2QHZ9,UniRef:UniRef50_P27848,UniRef:UniRef90_E2QHZ9;ec_number=3.1.3.74
contig_1	Pyrodigal	gene	3973612	3974511	.	+	.	ID=GCA000010485_03899_gene;locus_tag=GCA000010485_03899;gene=bioP
contig_1	Pyrodigal	CDS	3973612	3974511	.	+	0	ID=GCA000010485_03899;Name=biotin transporter;locus_tag=GCA000010485_03899;product=biotin transporter;Dbxref=GO:0005886,GO:0016020;gene=bioP;Parent=GCA000010485_03899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001196238,COG:COG0697,COG:GER,RefSeq:WP_001196237.1,SO:0001217,UniParc:UPI0000D50DF5,UniRef:UniRef100_A0A061YAD2,UniRef:UniRef50_P0ADP5,UniRef:UniRef90_P0ADP5
contig_1	Pyrodigal	gene	3974399	3975352	.	-	.	ID=GCA000010485_03900_gene;locus_tag=GCA000010485_03900;gene=metR
contig_1	Pyrodigal	CDS	3974399	3975352	.	-	0	ID=GCA000010485_03900;Name=HTH-type transcriptional regulator MetR;locus_tag=GCA000010485_03900;product=HTH-type transcriptional regulator MetR;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009086;gene=metR;Parent=GCA000010485_03900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K03576,RefSeq:WP_000573618.1,SO:0001217,UniParc:UPI00005AABC7,UniRef:UniRef100_E2QI01,UniRef:UniRef50_P0A9F9,UniRef:UniRef90_P0A9F9
contig_1	Pyrodigal	gene	3975470	3977731	.	+	.	ID=GCA000010485_03901_gene;locus_tag=GCA000010485_03901;gene=metE
contig_1	Pyrodigal	CDS	3975470	3977731	.	+	0	ID=GCA000010485_03901;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000010485_03901;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0008652,GO:0009086,GO:0032259;gene=metE;Parent=GCA000010485_03901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,RefSeq:WP_000153956.1,SO:0001217,UniParc:UPI0001C22F1D,UniRef:UniRef100_S6BJ89,UniRef:UniRef50_P25665,UniRef:UniRef90_P25665;ec_number=2.1.1.14
contig_1	Pyrodigal	gene	3978070	3978627	.	+	.	ID=GCA000010485_03902_gene;locus_tag=GCA000010485_03902
contig_1	Pyrodigal	CDS	3978070	3978627	.	+	0	ID=GCA000010485_03902;Name=SIS domain-containing protein;locus_tag=GCA000010485_03902;product=SIS domain-containing protein;Parent=GCA000010485_03902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08094,RefSeq:WP_000339043.1,SO:0001217,UniParc:UPI00018BF00B,UniRef:UniRef100_A0A061K1K4,UniRef:UniRef50_A0A0H2VFC2,UniRef:UniRef90_A0A0H2VFC2;ec_number=5.3.1.27
contig_1	Pyrodigal	gene	3978669	3980177	.	+	.	ID=GCA000010485_03903_gene;locus_tag=GCA000010485_03903
contig_1	Pyrodigal	CDS	3978669	3980177	.	+	0	ID=GCA000010485_03903;Name=PTS system glucose-specific EIICB component;locus_tag=GCA000010485_03903;product=PTS system glucose-specific EIICB component;Parent=GCA000010485_03903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000037971.1,SO:0001217,UniParc:UPI0001C22F1F,UniRef:UniRef100_A0A066T2Z1,UniRef:UniRef50_A0A0D8VSI1,UniRef:UniRef90_A0A0D8VSI1
contig_1	Pyrodigal	gene	3980228	3982225	.	+	.	ID=GCA000010485_03904_gene;locus_tag=GCA000010485_03904;gene=tkt
contig_1	Pyrodigal	CDS	3980228	3982225	.	+	0	ID=GCA000010485_03904;Name=transketolase;locus_tag=GCA000010485_03904;product=transketolase;Dbxref=GO:0004802;gene=tkt;Parent=GCA000010485_03904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00615,RefSeq:WP_001088086.1,SO:0001217,UniParc:UPI0001C22F20,UniRef:UniRef100_A0A0C5F5I6,UniRef:UniRef50_A0A261GRB9,UniRef:UniRef90_E2QI09;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	3982255	3983100	.	-	.	ID=GCA000010485_03905_gene;locus_tag=GCA000010485_03905
contig_1	Pyrodigal	CDS	3982255	3983100	.	-	0	ID=GCA000010485_03905;Name=Transcriptional regulator;locus_tag=GCA000010485_03905;product=Transcriptional regulator;Parent=GCA000010485_03905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060029.1,SO:0001217,UniParc:UPI0001C22F21,UniRef:UniRef100_A0A061YEA0,UniRef:UniRef50_B7MHA2,UniRef:UniRef90_B7MHA2
contig_1	Pyrodigal	gene	3983300	3984205	.	-	.	ID=GCA000010485_03906_gene;locus_tag=GCA000010485_03906;gene=lysR
contig_1	Pyrodigal	CDS	3983300	3984205	.	-	0	ID=GCA000010485_03906;Name=LysR family transcriptional regulator;locus_tag=GCA000010485_03906;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000010485_03906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000470720.1,SO:0001217,UniParc:UPI0001C22F22,UniRef:UniRef100_A0A066SZ72,UniRef:UniRef50_A0A076LMN3,UniRef:UniRef90_A0A1V2SZ14
contig_1	Pyrodigal	gene	3984283	3985506	.	-	.	ID=GCA000010485_03907_gene;locus_tag=GCA000010485_03907
contig_1	Pyrodigal	CDS	3984283	3985506	.	-	0	ID=GCA000010485_03907;Name=Permease;locus_tag=GCA000010485_03907;product=Permease;Parent=GCA000010485_03907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10974,RefSeq:WP_001227356.1,SO:0001217,UniParc:UPI0000D50DF8,UniRef:UniRef100_E2QI12,UniRef:UniRef50_A0A1C7FFI6,UniRef:UniRef90_A0A061LCR4
contig_1	Pyrodigal	gene	3985532	3985921	.	-	.	ID=GCA000010485_03908_gene;locus_tag=GCA000010485_03908
contig_1	Pyrodigal	CDS	3985532	3985921	.	-	0	ID=GCA000010485_03908;Name=Glutamyl-tRNA amidotransferase;locus_tag=GCA000010485_03908;product=Glutamyl-tRNA amidotransferase;Parent=GCA000010485_03908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214035.1,SO:0001217,UniParc:UPI00000DF2EE,UniRef:UniRef100_E2QI13,UniRef:UniRef50_A0A0N0XGP2,UniRef:UniRef90_E2QI13
contig_1	Pyrodigal	gene	3985938	3986894	.	-	.	ID=GCA000010485_03909_gene;locus_tag=GCA000010485_03909;gene=arcC
contig_1	Pyrodigal	CDS	3985938	3986894	.	-	0	ID=GCA000010485_03909;Name=carbamate kinase;locus_tag=GCA000010485_03909;product=carbamate kinase;Dbxref=GO:0006520,GO:0008804;gene=arcC;Parent=GCA000010485_03909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000240546.1,SO:0001217,UniParc:UPI00000DF2EF,UniRef:UniRef100_E2QI14,UniRef:UniRef50_A0A2B7MAP4,UniRef:UniRef90_E2QI14;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	3986887	3988362	.	-	.	ID=GCA000010485_03910_gene;locus_tag=GCA000010485_03910
contig_1	Pyrodigal	CDS	3986887	3988362	.	-	0	ID=GCA000010485_03910;Name=Ybl186;locus_tag=GCA000010485_03910;product=Ybl186;Parent=GCA000010485_03910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22F23,UniRef:UniRef100_A0A066T7D5,UniRef:UniRef50_A0A389M8J8,UniRef:UniRef90_A0A4C6ZRA4
contig_1	Pyrodigal	gene	3988308	3989867	.	-	.	ID=GCA000010485_03911_gene;locus_tag=GCA000010485_03911
contig_1	Pyrodigal	CDS	3988308	3989867	.	-	0	ID=GCA000010485_03911;Name=Succinyl-CoA ligase [ADP-forming] subunit alpha;locus_tag=GCA000010485_03911;product=Succinyl-CoA ligase [ADP-forming] subunit alpha;Parent=GCA000010485_03911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02381,RefSeq:WP_000865632.1,SO:0001217,UniParc:UPI0001C22F24,UniRef:UniRef100_A0A061YHS8,UniRef:UniRef50_H5V1F5,UniRef:UniRef90_A0A370V469
contig_1	Pyrodigal	gene	3989962	3990822	.	-	.	ID=GCA000010485_03912_gene;locus_tag=GCA000010485_03912
contig_1	Pyrodigal	CDS	3989962	3990822	.	-	0	ID=GCA000010485_03912;Name=DUF2877 domain-containing protein;locus_tag=GCA000010485_03912;product=DUF2877 domain-containing protein;Parent=GCA000010485_03912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296601.1,SO:0001217,UniParc:UPI0001C22F25,UniRef:UniRef100_A0A066SYW9,UniRef:UniRef50_B7UNF8,UniRef:UniRef90_B7UNF8
contig_1	Pyrodigal	gene	3990828	3991496	.	-	.	ID=GCA000010485_03913_gene;locus_tag=GCA000010485_03913
contig_1	Pyrodigal	CDS	3990828	3991496	.	-	0	ID=GCA000010485_03913;Name=Cysteine hydrolase;locus_tag=GCA000010485_03913;product=Cysteine hydrolase;Parent=GCA000010485_03913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000194418.1,SO:0001217,UniParc:UPI0001C22F26,UniRef:UniRef100_A0A066T301,UniRef:UniRef50_A0A2B7LLY5,UniRef:UniRef90_A0A2B7LLY5
contig_1	Pyrodigal	gene	3991627	3991722	.	+	.	ID=GCA000010485_03914_gene;locus_tag=GCA000010485_03914
contig_1	Pyrodigal	CDS	3991627	3991722	.	+	0	ID=GCA000010485_03914;Name=hypothetical protein;locus_tag=GCA000010485_03914;product=hypothetical protein;Parent=GCA000010485_03914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00016A1843,UniRef:UniRef100_A0A0A2RM61,UniRef:UniRef50_A0A0H3EP55,UniRef:UniRef90_A0A0H3EP55
contig_1	Pyrodigal	gene	3991753	3992562	.	-	.	ID=GCA000010485_03915_gene;locus_tag=GCA000010485_03915;gene=ysgA
contig_1	Pyrodigal	CDS	3991753	3992562	.	-	0	ID=GCA000010485_03915;Name=Putative carboxymethylenebutenolidase;locus_tag=GCA000010485_03915;product=Putative carboxymethylenebutenolidase;Dbxref=GO:0008806;gene=ysgA;Parent=GCA000010485_03915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0412,COG:Q,RefSeq:WP_001296602.1,SO:0001217,UniParc:UPI0001C22F27,UniRef:UniRef100_A0A066T7D9,UniRef:UniRef50_Q8X8L4,UniRef:UniRef90_Q8X8L4;ec_number=3.1.1.45
contig_1	Pyrodigal	gene	3992824	3993588	.	+	.	ID=GCA000010485_03916_gene;locus_tag=GCA000010485_03916;gene=udp
contig_1	Pyrodigal	CDS	3992824	3993588	.	+	0	ID=GCA000010485_03916;Name=uridine phosphorylase;locus_tag=GCA000010485_03916;product=uridine phosphorylase;Dbxref=GO:0004850,GO:0005829,GO:0009116,GO:0009164,GO:0009166,GO:0016763,GO:0044206,GO:0047847;gene=udp;Parent=GCA000010485_03916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2820,COG:F,KEGG:K00757,RefSeq:WP_000045178.1,SO:0001217,UniParc:UPI00005EFC3B,UniRef:UniRef100_P12758,UniRef:UniRef50_P12758,UniRef:UniRef90_P12758;ec_number=2.4.2.3
contig_1	Pyrodigal	gene	3993623	3995113	.	-	.	ID=GCA000010485_03917_gene;locus_tag=GCA000010485_03917
contig_1	Pyrodigal	CDS	3993623	3995113	.	-	0	ID=GCA000010485_03917;Name=C4-dicarboxylate ABC transporter permease;locus_tag=GCA000010485_03917;product=C4-dicarboxylate ABC transporter permease;Parent=GCA000010485_03917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07793,RefSeq:WP_000463026.1,SO:0001217,UniParc:UPI0000673E15,UniRef:UniRef100_A0A061K1Z8,UniRef:UniRef50_F4LR69,UniRef:UniRef90_A0A0L7AMM9
contig_1	Pyrodigal	gene	3995126	3995632	.	-	.	ID=GCA000010485_03918_gene;locus_tag=GCA000010485_03918
contig_1	Pyrodigal	CDS	3995126	3995632	.	-	0	ID=GCA000010485_03918;Name=Permease;locus_tag=GCA000010485_03918;product=Permease;Parent=GCA000010485_03918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07794,RefSeq:WP_001093393.1,SO:0001217,UniParc:UPI00005EFC3A,UniRef:UniRef100_E2QI22,UniRef:UniRef50_E2QI22,UniRef:UniRef90_E2QI22
contig_1	Pyrodigal	gene	3995649	3996623	.	-	.	ID=GCA000010485_03919_gene;locus_tag=GCA000010485_03919
contig_1	Pyrodigal	CDS	3995649	3996623	.	-	0	ID=GCA000010485_03919;Name=Periplasmic binding protein;locus_tag=GCA000010485_03919;product=Periplasmic binding protein;Parent=GCA000010485_03919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000589799.1,SO:0001217,UniParc:UPI0001C22F28,UniRef:UniRef100_A0A641BGL5,UniRef:UniRef50_A0A0D5LK21,UniRef:UniRef90_B7LU06
contig_1	Pyrodigal	gene	3996648	3997277	.	-	.	ID=GCA000010485_03920_gene;locus_tag=GCA000010485_03920
contig_1	Pyrodigal	CDS	3996648	3997277	.	-	0	ID=GCA000010485_03920;Name=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;locus_tag=GCA000010485_03920;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;Parent=GCA000010485_03920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01631,RefSeq:WP_001116473.1,SO:0001217,UniParc:UPI0001C22F29,UniRef:UniRef100_A0A066T7E5,UniRef:UniRef50_A0A1G5I985,UniRef:UniRef90_A0A0D6J0M2;ec_number=4.1.2.21
contig_1	Pyrodigal	gene	3997267	3998271	.	-	.	ID=GCA000010485_03921_gene;locus_tag=GCA000010485_03921
contig_1	Pyrodigal	CDS	3997267	3998271	.	-	0	ID=GCA000010485_03921;Name=2-dehydro-3-deoxygalactonokinase;locus_tag=GCA000010485_03921;product=2-dehydro-3-deoxygalactonokinase;Parent=GCA000010485_03921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001117531.1,SO:0001217,UniParc:UPI0001C22F2A,UniRef:UniRef100_A0A066SZ88,UniRef:UniRef50_A0A2S4RWB7,UniRef:UniRef90_A0A140NI08
contig_1	Pyrodigal	gene	3998295	3999062	.	-	.	ID=GCA000010485_03922_gene;locus_tag=GCA000010485_03922;gene=allR
contig_1	Pyrodigal	CDS	3998295	3999062	.	-	0	ID=GCA000010485_03922;Name=HTH-type transcriptional repressor AllR;locus_tag=GCA000010485_03922;product=HTH-type transcriptional repressor AllR;gene=allR;Parent=GCA000010485_03922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000852398.1,SO:0001217,UniParc:UPI00005EFC36,UniRef:UniRef100_E2QI26,UniRef:UniRef50_A0A2K3TNT9,UniRef:UniRef90_A0A2K3TNT9
contig_1	Pyrodigal	gene	3999279	4000706	.	+	.	ID=GCA000010485_03923_gene;locus_tag=GCA000010485_03923;gene=rmuC
contig_1	Pyrodigal	CDS	3999279	4000706	.	+	0	ID=GCA000010485_03923;Name=DNA recombination protein RmuC;locus_tag=GCA000010485_03923;product=DNA recombination protein RmuC;Dbxref=GO:0006310;gene=rmuC;Parent=GCA000010485_03923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1322,COG:L,KEGG:K09760,RefSeq:WP_000347720.1,SO:0001217,UniParc:UPI0001C22F58,UniRef:UniRef100_A0A1Y5C7Y1,UniRef:UniRef50_P0AG71,UniRef:UniRef90_P0AG71
contig_1	Pyrodigal	gene	4000801	4001556	.	+	.	ID=GCA000010485_03924_gene;locus_tag=GCA000010485_03924;gene=ubiE
contig_1	Pyrodigal	CDS	4000801	4001556	.	+	0	ID=GCA000010485_03924;Name=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;locus_tag=GCA000010485_03924;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;Dbxref=GO:0006744,GO:0008168,GO:0008425,GO:0009060,GO:0009234,GO:0032259,GO:0043770;gene=ubiE;Parent=GCA000010485_03924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000227959.1,SO:0001217,UniParc:UPI00000DF2FB,UniRef:UniRef100_B7MHC0,UniRef:UniRef50_P0A887,UniRef:UniRef90_P0A2K5;ec_number=2.1.1.201
contig_1	Pyrodigal	gene	4001570	4002175	.	+	.	ID=GCA000010485_03925_gene;locus_tag=GCA000010485_03925;gene=ubiJ
contig_1	Pyrodigal	CDS	4001570	4002175	.	+	0	ID=GCA000010485_03925;Name=ubiquinone biosynthesis protein UbiJ;locus_tag=GCA000010485_03925;product=ubiquinone biosynthesis protein UbiJ;Dbxref=GO:0005737,GO:0032150;gene=ubiJ;Parent=GCA000010485_03925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001116086,COG:COG3165,COG:H,KEGG:K03690,RefSeq:WP_012896882.1,SO:0001217,UniParc:UPI0001C22F59,UniRef:UniRef100_UPI0001C22F59,UniRef:UniRef50_P0ADP7,UniRef:UniRef90_P0ADP7
contig_1	Infernal	gene	4001924	4002175	.	+	.	ID=GCA000010485_03926_gene;locus_tag=GCA000010485_03926;gene=Erse
contig_1	Infernal	ncRNA	4001924	4002175	7.2e-47	+	.	ID=GCA000010485_03926;Name=Erse small RNA;locus_tag=GCA000010485_03926;product=Erse small RNA;Dbxref=RFAM:RF02757;Parent=GCA000010485_03926_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02757
contig_1	Pyrodigal	gene	4002172	4003812	.	+	.	ID=GCA000010485_03927_gene;locus_tag=GCA000010485_03927;gene=ubiB
contig_1	Pyrodigal	CDS	4002172	4003812	.	+	0	ID=GCA000010485_03927;Name=ubiquinone biosynthesis regulatory protein kinase UbiB;locus_tag=GCA000010485_03927;product=ubiquinone biosynthesis regulatory protein kinase UbiB;Dbxref=GO:0004672,GO:0005524,GO:0005886,GO:0006744,GO:0010795;gene=ubiB;Parent=GCA000010485_03927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0661,COG:HT,KEGG:K03688,RefSeq:WP_000187545.1,SO:0001217,UniParc:UPI00000DF2FD,UniRef:UniRef100_B7MHC2,UniRef:UniRef50_P0A6A0,UniRef:UniRef90_P0A6A0;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	4003891	4004160	.	+	.	ID=GCA000010485_03928_gene;locus_tag=GCA000010485_03928;gene=tatA
contig_1	Pyrodigal	CDS	4003891	4004160	.	+	0	ID=GCA000010485_03928;Name=Sec-independent protein translocase subunit TatA;locus_tag=GCA000010485_03928;product=Sec-independent protein translocase subunit TatA;Dbxref=GO:0005829,GO:0005886,GO:0008289,GO:0008320,GO:0009977,GO:0033281,GO:0042802,GO:0043953,GO:0065002;gene=tatA;Parent=GCA000010485_03928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_001295260.1,SO:0001217,UniParc:UPI00000540BA,UniRef:UniRef100_P69428,UniRef:UniRef50_P69428,UniRef:UniRef90_P69428
contig_1	Pyrodigal	gene	4004164	4004679	.	+	.	ID=GCA000010485_03929_gene;locus_tag=GCA000010485_03929;gene=tatB
contig_1	Pyrodigal	CDS	4004164	4004679	.	+	0	ID=GCA000010485_03929;Name=Sec-independent protein translocase protein TatB;locus_tag=GCA000010485_03929;product=Sec-independent protein translocase protein TatB;Dbxref=GO:0008320,GO:0015628,GO:0016020,GO:0033281,GO:0043953;gene=tatB;Parent=GCA000010485_03929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,KEGG:K03117,RefSeq:WP_000459601.1,SO:0001217,UniParc:UPI0001C22F5A,UniRef:UniRef100_A0A066T318,UniRef:UniRef50_P69425,UniRef:UniRef90_P69425
contig_1	Pyrodigal	gene	4004682	4005458	.	+	.	ID=GCA000010485_03930_gene;locus_tag=GCA000010485_03930;gene=tatC
contig_1	Pyrodigal	CDS	4004682	4005458	.	+	0	ID=GCA000010485_03930;Name=Sec-independent protein translocase subunit TatC;locus_tag=GCA000010485_03930;product=Sec-independent protein translocase subunit TatC;Dbxref=GO:0005886,GO:0008320,GO:0009314,GO:0009977,GO:0016020,GO:0033281,GO:0042802,GO:0043953,GO:0065002;gene=tatC;Parent=GCA000010485_03930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,RefSeq:WP_000109949.1,SO:0001217,UniParc:UPI00000DF2FF,UniRef:UniRef100_Q8FBI6,UniRef:UniRef50_P69423,UniRef:UniRef90_P69423
contig_1	Pyrodigal	gene	4005500	4006282	.	+	.	ID=GCA000010485_03931_gene;locus_tag=GCA000010485_03931;gene=tatD
contig_1	Pyrodigal	CDS	4005500	4006282	.	+	0	ID=GCA000010485_03931;Name=3'-5' ssDNA/RNA exonuclease TatD;locus_tag=GCA000010485_03931;product=3'-5' ssDNA/RNA exonuclease TatD;Dbxref=GO:0000175,GO:0000287,GO:0005737,GO:0008310,GO:0008408;gene=tatD;Parent=GCA000010485_03931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03424,RefSeq:WP_001296604.1,SO:0001217,UniParc:UPI0001C22F5B,UniRef:UniRef100_A0A061YAF9,UniRef:UniRef50_P27859,UniRef:UniRef90_P27859;ec_number=3.1.13.-
contig_1	Pyrodigal	gene	4006279	4006767	.	-	.	ID=GCA000010485_03932_gene;locus_tag=GCA000010485_03932;gene=rfaH
contig_1	Pyrodigal	CDS	4006279	4006767	.	-	0	ID=GCA000010485_03932;Name=transcription/translation regulatory transformer protein RfaH;locus_tag=GCA000010485_03932;product=transcription/translation regulatory transformer protein RfaH;Dbxref=GO:0001073,GO:0003677,GO:0005829,GO:0006355,GO:0140673;gene=rfaH;Parent=GCA000010485_03932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,KEGG:K05785,RefSeq:WP_001192400.1,SO:0001217,UniParc:UPI00000BE9B0,UniRef:UniRef100_Q8FBI4,UniRef:UniRef50_P0AFW0,UniRef:UniRef90_P0AFW0
contig_1	Pyrodigal	gene	4006934	4008427	.	+	.	ID=GCA000010485_03933_gene;locus_tag=GCA000010485_03933;gene=ubiD
contig_1	Pyrodigal	CDS	4006934	4008427	.	+	0	ID=GCA000010485_03933;Name=4-hydroxy-3-polyprenylbenzoate decarboxylase;locus_tag=GCA000010485_03933;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;Dbxref=GO:0005829,GO:0005886,GO:0006744,GO:0008694,GO:0016831,GO:0046872;gene=ubiD;Parent=GCA000010485_03933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0043,COG:H,RefSeq:WP_000339804.1,SO:0001217,UniParc:UPI0000137991,UniRef:UniRef100_P0AAB4,UniRef:UniRef50_P0AAB4,UniRef:UniRef90_P0AAB4;ec_number=4.1.1.98
contig_1	Pyrodigal	gene	4008473	4009174	.	+	.	ID=GCA000010485_03934_gene;locus_tag=GCA000010485_03934;gene=fre
contig_1	Pyrodigal	CDS	4008473	4009174	.	+	0	ID=GCA000010485_03934;Name=NAD(P)H-flavin reductase;locus_tag=GCA000010485_03934;product=NAD(P)H-flavin reductase;Dbxref=GO:0005829,GO:0006826,GO:0006979,GO:0008047,GO:0016491,GO:0030091,GO:0042602,GO:0052875;gene=fre;Parent=GCA000010485_03934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0543,COG:HC,KEGG:K05368,RefSeq:WP_000209826.1,SO:0001217,UniParc:UPI000003CAA6,UniRef:UniRef100_P0AEN1,UniRef:UniRef50_P0AEN1,UniRef:UniRef90_P0AEN1;ec_number=1.5.1.41
contig_1	Pyrodigal	gene	4009355	4010518	.	-	.	ID=GCA000010485_03935_gene;locus_tag=GCA000010485_03935;gene=fadA
contig_1	Pyrodigal	CDS	4009355	4010518	.	-	0	ID=GCA000010485_03935;Name=acetyl-CoA C-acyltransferase FadA;locus_tag=GCA000010485_03935;product=acetyl-CoA C-acyltransferase FadA;Dbxref=GO:0003988,GO:0005737,GO:0006631,GO:0006635,GO:0010124,GO:0016042;gene=fadA;Parent=GCA000010485_03935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_000438747.1,SO:0001217,UniParc:UPI0000E45209,UniRef:UniRef100_A1AI32,UniRef:UniRef50_P21151,UniRef:UniRef90_P21151;ec_number=2.3.1.16
contig_1	Pyrodigal	gene	4010528	4012717	.	-	.	ID=GCA000010485_03936_gene;locus_tag=GCA000010485_03936;gene=fadB
contig_1	Pyrodigal	CDS	4010528	4012717	.	-	0	ID=GCA000010485_03936;Name=fatty acid oxidation complex subunit alpha FadB;locus_tag=GCA000010485_03936;product=fatty acid oxidation complex subunit alpha FadB;Dbxref=GO:0003857,GO:0004165,GO:0004300,GO:0006635,GO:0008692,GO:0009062,GO:0016509,GO:0036125,GO:0070403;gene=fadB;Parent=GCA000010485_03936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1250,COG:I,RefSeq:WP_000965911.1,SO:0001217,UniParc:UPI0001C22F5C,UniRef:UniRef100_A0A061K6E7,UniRef:UniRef50_P21177,UniRef:UniRef90_P21177
contig_1	Pyrodigal	gene	4012907	4014238	.	+	.	ID=GCA000010485_03937_gene;locus_tag=GCA000010485_03937;gene=pepQ
contig_1	Pyrodigal	CDS	4012907	4014238	.	+	0	ID=GCA000010485_03937;Name=Xaa-Pro dipeptidase;locus_tag=GCA000010485_03937;product=Xaa-Pro dipeptidase;Dbxref=GO:0004177,GO:0005829,GO:0006508,GO:0008235,GO:0016795,GO:0046872,GO:0102009;gene=pepQ;Parent=GCA000010485_03937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01271,RefSeq:WP_000444561.1,SO:0001217,UniParc:UPI00001315F2,UniRef:UniRef100_P21165,UniRef:UniRef50_P21165,UniRef:UniRef90_P21165;ec_number=3.4.13.9
contig_1	Pyrodigal	gene	4014238	4014852	.	+	.	ID=GCA000010485_03938_gene;locus_tag=GCA000010485_03938;gene=yigZ
contig_1	Pyrodigal	CDS	4014238	4014852	.	+	0	ID=GCA000010485_03938;Name=IMPACT family protein;locus_tag=GCA000010485_03938;product=IMPACT family protein;Dbxref=GO:0005737,GO:0006446,GO:0017111,GO:0032561,GO:0043168;gene=yigZ;Parent=GCA000010485_03938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1739,COG:R,RefSeq:WP_001295262.1,SO:0001217,UniParc:UPI0000226475,UniRef:UniRef100_C3SJX2,UniRef:UniRef50_P27862,UniRef:UniRef90_P27862
contig_1	Pyrodigal	gene	4014891	4016342	.	+	.	ID=GCA000010485_03939_gene;locus_tag=GCA000010485_03939;gene=trkH
contig_1	Pyrodigal	CDS	4014891	4016342	.	+	0	ID=GCA000010485_03939;Name=Trk system potassium transporter TrkH;locus_tag=GCA000010485_03939;product=Trk system potassium transporter TrkH;Dbxref=GO:0005267,GO:0005886,GO:0015379,GO:0030955,GO:0071805;gene=trkH;Parent=GCA000010485_03939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_000545665.1,SO:0001217,UniParc:UPI00000DF304,UniRef:UniRef100_E2QI42,UniRef:UniRef50_P0AFZ7,UniRef:UniRef90_P0AFZ7
contig_1	Pyrodigal	gene	4016354	4016899	.	+	.	ID=GCA000010485_03940_gene;locus_tag=GCA000010485_03940;gene=hemG
contig_1	Pyrodigal	CDS	4016354	4016899	.	+	0	ID=GCA000010485_03940;Name=menaquinone-dependent protoporphyrinogen IX dehydrogenase;locus_tag=GCA000010485_03940;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;Dbxref=GO:0004729,GO:0005886,GO:0006779,GO:0006782,GO:0006783,GO:0006785,GO:0009055,GO:0010181,GO:0016020,GO:0070819;gene=hemG;Parent=GCA000010485_03940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4635,COG:H,KEGG:K00230,RefSeq:WP_000853959.1,SO:0001217,UniParc:UPI000012C58D,UniRef:UniRef100_P0ACB4,UniRef:UniRef50_P0ACB4,UniRef:UniRef90_P0ACB4;ec_number=1.3.5.3
contig_1	Infernal	gene	4017275	4018816	.	+	.	ID=GCA000010485_03941_gene;locus_tag=GCA000010485_03941;gene=rrs
contig_1	Infernal	rRNA	4017275	4018816	7.8e-48	+	.	ID=GCA000010485_03941;Name=16S ribosomal RNA;locus_tag=GCA000010485_03941;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_03941_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	4018902	4018977	.	+	.	ID=GCA000010485_03942_gene;locus_tag=GCA000010485_03942;gene=trnE
contig_1	tRNAscan-SE	tRNA	4018902	4018977	.	+	.	ID=GCA000010485_03942;Name=tRNA-Glu(ttc);locus_tag=GCA000010485_03942;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000010485_03942_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	4019055	4019163	.	+	.	ID=GCA000010485_03943_gene;locus_tag=GCA000010485_03943;gene=StyR-44
contig_1	Infernal	ncRNA	4019055	4019163	2.3e-21	+	.	ID=GCA000010485_03943;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_03943;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_03943_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	Infernal	gene	4019171	4022074	.	+	.	ID=GCA000010485_03944_gene;locus_tag=GCA000010485_03944;gene=rrl
contig_1	Infernal	rRNA	4019171	4022074	5.4e-06	+	.	ID=GCA000010485_03944;Name=23S ribosomal RNA;locus_tag=GCA000010485_03944;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_03944_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	4022177	4022292	.	+	.	ID=GCA000010485_03945_gene;locus_tag=GCA000010485_03945;gene=rrf
contig_1	Infernal	rRNA	4022177	4022292	2e-15	+	.	ID=GCA000010485_03945;Name=5S ribosomal RNA;locus_tag=GCA000010485_03945;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_03945_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	4022397	4022924	.	-	.	ID=GCA000010485_03946_gene;locus_tag=GCA000010485_03946;gene=mobB
contig_1	Pyrodigal	CDS	4022397	4022924	.	-	0	ID=GCA000010485_03946;Name=molybdopterin-guanine dinucleotide biosynthesis protein MobB;locus_tag=GCA000010485_03946;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;Dbxref=GO:0005525,GO:0006777,GO:0042803;gene=mobB;Parent=GCA000010485_03946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_000907613.1,SO:0001217,UniParc:UPI00000DF305,UniRef:UniRef100_E2QI44,UniRef:UniRef50_P32125,UniRef:UniRef90_P32125
contig_1	Pyrodigal	gene	4022906	4023490	.	-	.	ID=GCA000010485_03947_gene;locus_tag=GCA000010485_03947;gene=mobA
contig_1	Pyrodigal	CDS	4022906	4023490	.	-	0	ID=GCA000010485_03947;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA000010485_03947;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0000287,GO:0003824,GO:0005525,GO:0005737,GO:0006777,GO:0016779,GO:0061603,GO:1902758;gene=mobA;Parent=GCA000010485_03947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_001052187.1,SO:0001217,UniParc:UPI0001887931,UniRef:UniRef100_A0A061Y9B7,UniRef:UniRef50_P32173,UniRef:UniRef90_P32173;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	4023560	4023829	.	+	.	ID=GCA000010485_03948_gene;locus_tag=GCA000010485_03948;gene=yihD
contig_1	Pyrodigal	CDS	4023560	4023829	.	+	0	ID=GCA000010485_03948;Name=Protein YihD;locus_tag=GCA000010485_03948;product=Protein YihD;Dbxref=GO:0005829;gene=yihD;Parent=GCA000010485_03948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3084,COG:S,KEGG:K09896,RefSeq:WP_001295263.1,SO:0001217,UniParc:UPI000013B3F3,UniRef:UniRef100_P0ADP9,UniRef:UniRef50_P0ADP9,UniRef:UniRef90_P0ADP9
contig_1	Pyrodigal	gene	4023906	4024892	.	+	.	ID=GCA000010485_03949_gene;locus_tag=GCA000010485_03949;gene=srkA
contig_1	Pyrodigal	CDS	4023906	4024892	.	+	0	ID=GCA000010485_03949;Name=stress response kinase SrkA;locus_tag=GCA000010485_03949;product=stress response kinase SrkA;Dbxref=GO:0000287,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005737,GO:0006468,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=srkA;Parent=GCA000010485_03949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001065497,COG:COG2334,COG:T,RefSeq:WP_001065496.1,SO:0001217,UniParc:UPI00016DBD6D,UniRef:UniRef100_A0A2J1C2E9,UniRef:UniRef50_P0C0K3,UniRef:UniRef90_P0C0K3;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	4024909	4025535	.	+	.	ID=GCA000010485_03950_gene;locus_tag=GCA000010485_03950;gene=dsbA
contig_1	Pyrodigal	CDS	4024909	4025535	.	+	0	ID=GCA000010485_03950;Name=thiol:disulfide interchange protein DsbA;locus_tag=GCA000010485_03950;product=thiol:disulfide interchange protein DsbA;Dbxref=GO:0015036,GO:0016491,GO:0042597;gene=dsbA;Parent=GCA000010485_03950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,KEGG:K03673,RefSeq:WP_000725337.1,SO:0001217,UniParc:UPI000002D10B,UniRef:UniRef100_P0AEG4,UniRef:UniRef50_P0AEG4,UniRef:UniRef90_P0AEG4;ec_number=1.8.4.15
contig_1	Pyrodigal	gene	4025690	4027120	.	+	.	ID=GCA000010485_03951_gene;locus_tag=GCA000010485_03951;gene=yihF
contig_1	Pyrodigal	CDS	4025690	4027120	.	+	0	ID=GCA000010485_03951;Name=putative protein YihF;locus_tag=GCA000010485_03951;product=putative protein YihF;gene=yihF;Parent=GCA000010485_03951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545699.1,SO:0001217,UniParc:UPI0002A3B496,UniRef:UniRef100_A0A7I0KVZ5,UniRef:UniRef50_P32128,UniRef:UniRef90_P32128
contig_1	Pyrodigal	gene	4027161	4028093	.	-	.	ID=GCA000010485_03952_gene;locus_tag=GCA000010485_03952;gene=yihG
contig_1	Pyrodigal	CDS	4027161	4028093	.	-	0	ID=GCA000010485_03952;Name=putative acyltransferase YihG;locus_tag=GCA000010485_03952;product=putative acyltransferase YihG;Dbxref=GO:0005886,GO:0016746;gene=yihG;Parent=GCA000010485_03952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_001545700.1,SO:0001217,UniParc:UPI0001C22F5E,UniRef:UniRef100_A0A485JMQ1,UniRef:UniRef50_P32129,UniRef:UniRef90_P32129;ec_number=2.3.-.-
contig_1	Pyrodigal	gene	4028213	4028398	.	-	.	ID=GCA000010485_03953_gene;locus_tag=GCA000010485_03953
contig_1	Pyrodigal	CDS	4028213	4028398	.	-	0	ID=GCA000010485_03953;Name=Succinate dehydrogenase;locus_tag=GCA000010485_03953;product=Succinate dehydrogenase;Parent=GCA000010485_03953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000010549.1,SO:0001217,UniParc:UPI0001B531AE,UniRef:UniRef100_A0A061KBR3,UniRef:UniRef50_A0A2X7WW37,UniRef:UniRef90_A0A2X7WW37
contig_1	Pyrodigal	gene	4028457	4031243	.	+	.	ID=GCA000010485_03954_gene;locus_tag=GCA000010485_03954;gene=polA
contig_1	Pyrodigal	CDS	4028457	4031243	.	+	0	ID=GCA000010485_03954;Name=DNA polymerase I;locus_tag=GCA000010485_03954;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0005737,GO:0005829,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006302,GO:0008408,GO:0008409;gene=polA;Parent=GCA000010485_03954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_000250021.1,SO:0001217,UniParc:UPI0001C22F5F,UniRef:UniRef100_A0A2T3S421,UniRef:UniRef50_P00582,UniRef:UniRef90_P00582;ec_number=2.7.7.7
contig_1	Infernal	gene	4031381	4031499	.	+	.	ID=GCA000010485_03955_gene;locus_tag=GCA000010485_03955;gene=Spot_42
contig_1	Infernal	ncRNA	4031381	4031499	2.5e-22	+	.	ID=GCA000010485_03955;Name=Spot 42 RNA;locus_tag=GCA000010485_03955;product=Spot 42 RNA;Dbxref=RFAM:RF00021;Parent=GCA000010485_03955_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00021
contig_1	Bakta	gene	4031409	4031456	.	+	.	ID=GCA000010485_03956_gene;locus_tag=GCA000010485_03956;inference=ab initio prediction:Bakta;gene=spfP
contig_1	Bakta	CDS	4031409	4031456	.	+	0	ID=GCA000010485_03956;Name=Small protein SpfP;locus_tag=GCA000010485_03956;product=Small protein SpfP;Dbxref=GO:0043610,GO:0061980;gene=spfP;Parent=GCA000010485_03956_gene;Note=RefSeq:WP_071892919.1,SO:0001217,UniParc:UPI00000D0151,UniRef:UniRef100_P0DW56,UniRef:UniRef50_P0DW56,UniRef:UniRef90_P0DW56
contig_1	Pyrodigal	gene	4031625	4032257	.	-	.	ID=GCA000010485_03957_gene;locus_tag=GCA000010485_03957;gene=yihA
contig_1	Pyrodigal	CDS	4031625	4032257	.	-	0	ID=GCA000010485_03957;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA000010485_03957;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0042254,GO:0043022,GO:0046872;gene=yihA;Parent=GCA000010485_03957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_001545701.1,SO:0001217,UniParc:UPI0001C22F60,UniRef:UniRef100_A0A7I0KW10,UniRef:UniRef50_P0A6P7,UniRef:UniRef90_P0A6P7
contig_1	Infernal	gene	4032528	4032781	.	+	.	ID=GCA000010485_03958_gene;locus_tag=GCA000010485_03958;gene=csrC
contig_1	Infernal	ncRNA	4032528	4032781	1.4e-39	+	.	ID=GCA000010485_03958;Name=CsrC RNA family;locus_tag=GCA000010485_03958;gene=csrC;product=CsrC RNA family;Dbxref=RFAM:RF00084;Parent=GCA000010485_03958_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00084
contig_1	Bakta	gene	4032554	4032631	.	+	.	ID=GCA000010485_03959_gene;locus_tag=GCA000010485_03959;inference=ab initio prediction:Bakta;gene=yihI
contig_1	Bakta	CDS	4032554	4032631	.	+	0	ID=GCA000010485_03959;Name=Der GTPase-activating protein YihI;locus_tag=GCA000010485_03959;product=Der GTPase-activating protein YihI;Dbxref=GO:0005096,GO:0042254;gene=yihI;Parent=GCA000010485_03959_gene;Note=COG:COG3078,COG:J,KEGG:K09894,SO:0001217,UniParc:UPI00000D0E88,UniRef:UniRef100_A0A376SY80,UniRef:UniRef50_P0A8H6,UniRef:UniRef90_P0A8H6
contig_1	Pyrodigal	gene	4032839	4033348	.	+	.	ID=GCA000010485_03960_gene;locus_tag=GCA000010485_03960;gene=yihI
contig_1	Pyrodigal	CDS	4032839	4033348	.	+	0	ID=GCA000010485_03960;Name=Der GTPase-activating protein YihI;locus_tag=GCA000010485_03960;product=Der GTPase-activating protein YihI;Dbxref=GO:0005096,GO:0042254;gene=yihI;Parent=GCA000010485_03960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3078,COG:J,KEGG:K09894,RefSeq:WP_001305065.1,SO:0001217,UniParc:UPI00000DF30E,UniRef:UniRef100_Q8FBG9,UniRef:UniRef50_P0A8H6,UniRef:UniRef90_P0A8H6
contig_1	Pyrodigal	gene	4033537	4034910	.	+	.	ID=GCA000010485_03961_gene;locus_tag=GCA000010485_03961;gene=hemN
contig_1	Pyrodigal	CDS	4033537	4034910	.	+	0	ID=GCA000010485_03961;Name=oxygen-independent coproporphyrinogen III oxidase;locus_tag=GCA000010485_03961;product=oxygen-independent coproporphyrinogen III oxidase;Dbxref=GO:0004109,GO:0005737,GO:0006779,GO:0006782,GO:0019353,GO:0046872,GO:0051539,GO:0051989;gene=hemN;Parent=GCA000010485_03961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,RefSeq:WP_000116111.1,SO:0001217,UniParc:UPI0001C22F62,UniRef:UniRef100_A0A7I0KXX6,UniRef:UniRef50_P32131,UniRef:UniRef90_P32131;ec_number=1.3.98.3
contig_1	Infernal	gene	4035035	4035106	.	+	.	ID=GCA000010485_03962_gene;locus_tag=GCA000010485_03962;gene=naRNA4
contig_1	Infernal	ncRNA	4035035	4035106	2.4e-11	+	.	ID=GCA000010485_03962;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_03962;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_03962_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4035143	4035253	.	-	.	ID=GCA000010485_03963_gene;locus_tag=GCA000010485_03963;gene=yshB
contig_1	Pyrodigal	CDS	4035143	4035253	.	-	0	ID=GCA000010485_03963;Name=YshB family small membrane protein;locus_tag=GCA000010485_03963;product=YshB family small membrane protein;gene=yshB;Parent=GCA000010485_03963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000893994.1,SO:0001217,UniParc:UPI0000DAD0FD,UniRef:UniRef100_C1P620,UniRef:UniRef50_C1P620,UniRef:UniRef90_C1P620
contig_1	Pyrodigal	gene	4035365	4036774	.	-	.	ID=GCA000010485_03964_gene;locus_tag=GCA000010485_03964;gene=glnG
contig_1	Pyrodigal	CDS	4035365	4036774	.	-	0	ID=GCA000010485_03964;Name=nitrogen regulation protein NR(I);locus_tag=GCA000010485_03964;product=nitrogen regulation protein NR(I);Dbxref=GO:0006355,GO:0043565;gene=glnG;Parent=GCA000010485_03964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001315107.1,SO:0001217,UniParc:UPI00005EFC1F,UniRef:UniRef100_A0A061KWW4,UniRef:UniRef50_P0AFB8,UniRef:UniRef90_A0AAP5RTU5
contig_1	Pyrodigal	gene	4036786	4037835	.	-	.	ID=GCA000010485_03965_gene;locus_tag=GCA000010485_03965;gene=glnL
contig_1	Pyrodigal	CDS	4036786	4037835	.	-	0	ID=GCA000010485_03965;Name=nitrogen regulation protein NR(II);locus_tag=GCA000010485_03965;product=nitrogen regulation protein NR(II);Dbxref=GO:0000155,GO:0005524,GO:0005737,GO:0006355,GO:0007165,GO:0009399,GO:0016310,GO:0016787;gene=glnL;Parent=GCA000010485_03965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3852,COG:T,RefSeq:WP_000190574.1,SO:0001217,UniParc:UPI00000DF311,UniRef:UniRef100_E2QIP6,UniRef:UniRef50_P0AFB5,UniRef:UniRef90_P0AFB5;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	4038009	4039418	.	-	.	ID=GCA000010485_03966_gene;locus_tag=GCA000010485_03966;gene=glnA
contig_1	Pyrodigal	CDS	4038009	4039418	.	-	0	ID=GCA000010485_03966;Name=glutamate--ammonia ligase;locus_tag=GCA000010485_03966;product=glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0005829,GO:0006542,GO:0008152,GO:0009314,GO:0016020,GO:0019676,GO:0019740,GO:0042802,GO:0046872;gene=glnA;Parent=GCA000010485_03966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_001271717.1,SO:0001217,UniParc:UPI0000163A46,UniRef:UniRef100_P0A9C5,UniRef:UniRef50_P0A9C5,UniRef:UniRef90_P0A9C5;ec_number=6.3.1.2
contig_1	Infernal	gene	4039602	4039709	.	+	.	ID=GCA000010485_03967_gene;locus_tag=GCA000010485_03967;gene=ES222
contig_1	Infernal	ncRNA	4039602	4039709	8.1e-22	+	.	ID=GCA000010485_03967;Name=ES222 sRNA;locus_tag=GCA000010485_03967;product=ES222 sRNA;Dbxref=RFAM:RF02755;Parent=GCA000010485_03967_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02755
contig_1	Pyrodigal	gene	4039791	4041614	.	+	.	ID=GCA000010485_03968_gene;locus_tag=GCA000010485_03968;gene=typA
contig_1	Pyrodigal	CDS	4039791	4041614	.	+	0	ID=GCA000010485_03968;Name=ribosome-dependent GTPase TypA;locus_tag=GCA000010485_03968;product=ribosome-dependent GTPase TypA;Dbxref=GO:0000027,GO:0000049,GO:0005525,GO:0005829,GO:0019843,GO:0043022,GO:0097216,GO:1990606,GO:1990904;gene=typA;Parent=GCA000010485_03968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_000570668.1,SO:0001217,UniParc:UPI000013788D,UniRef:UniRef100_P0DTT0,UniRef:UniRef50_P0DTT0,UniRef:UniRef90_P0DTT0;ec_number=3.6.5.-
contig_1	Infernal	gene	4041599	4041667	.	+	.	ID=GCA000010485_03969_gene;locus_tag=GCA000010485_03969;gene=STnc370
contig_1	Infernal	ncRNA	4041599	4041667	6.6e-07	+	.	ID=GCA000010485_03969;Name=Enterobacterial sRNA STnc370;locus_tag=GCA000010485_03969;product=Enterobacterial sRNA STnc370;Dbxref=RFAM:RF02064;Parent=GCA000010485_03969_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02064
contig_1	Pyrodigal	gene	4041717	4042409	.	-	.	ID=GCA000010485_03970_gene;locus_tag=GCA000010485_03970;gene=ompL
contig_1	Pyrodigal	CDS	4041717	4042409	.	-	0	ID=GCA000010485_03970;Name=porin OmpL;locus_tag=GCA000010485_03970;product=porin OmpL;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0015772,GO:0046930;gene=ompL;Parent=GCA000010485_03970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22110,RefSeq:WP_000789939.1,SO:0001217,UniParc:UPI0001C22F8F,UniRef:UniRef100_A0A3K2EZL6,UniRef:UniRef50_P76773,UniRef:UniRef90_P76773
contig_1	Pyrodigal	gene	4042477	4043880	.	-	.	ID=GCA000010485_03971_gene;locus_tag=GCA000010485_03971;gene=yihO
contig_1	Pyrodigal	CDS	4042477	4043880	.	-	0	ID=GCA000010485_03971;Name=Putative sulfoquinovose importer;locus_tag=GCA000010485_03971;product=Putative sulfoquinovose importer;Dbxref=GO:0005886,GO:0006814,GO:0008643,GO:0015293,GO:0055085,GO:0072348,GO:1901682;gene=yihO;Parent=GCA000010485_03971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001279683.1,SO:0001217,UniParc:UPI0001C22F90,UniRef:UniRef100_A0A3K2UYV5,UniRef:UniRef50_P32136,UniRef:UniRef90_P32136
contig_1	Pyrodigal	gene	4043923	4045308	.	-	.	ID=GCA000010485_03972_gene;locus_tag=GCA000010485_03972
contig_1	Pyrodigal	CDS	4043923	4045308	.	-	0	ID=GCA000010485_03972;Name=2%2C3-dihydroxypropane-1-sulfonate exporter;locus_tag=GCA000010485_03972;product=2%2C3-dihydroxypropane-1-sulfonate exporter;Parent=GCA000010485_03972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000018387.1,SO:0001217,UniParc:UPI00005F0188,UniRef:UniRef100_A0A0C2ENE2,UniRef:UniRef50_P32136,UniRef:UniRef90_A0A0C2ENE2
contig_1	Pyrodigal	gene	4045354	4047390	.	-	.	ID=GCA000010485_03973_gene;locus_tag=GCA000010485_03973;gene=yihQ
contig_1	Pyrodigal	CDS	4045354	4047390	.	-	0	ID=GCA000010485_03973;Name=sulfoquinovosidase;locus_tag=GCA000010485_03973;product=sulfoquinovosidase;Dbxref=GO:0004553,GO:0005975,GO:0030246,GO:0061720,GO:1990929;gene=yihQ;Parent=GCA000010485_03973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000380843,RefSeq:WP_000380856.1,SO:0001217,UniParc:UPI0001C22F91,UniRef:UniRef100_A0A7I0KW00,UniRef:UniRef50_P32138,UniRef:UniRef90_P32138;ec_number=3.2.1.20
contig_1	Pyrodigal	gene	4047496	4048371	.	-	.	ID=GCA000010485_03974_gene;locus_tag=GCA000010485_03974
contig_1	Pyrodigal	CDS	4047496	4048371	.	-	0	ID=GCA000010485_03974;Name=putative membrane transporter protein;locus_tag=GCA000010485_03974;product=putative membrane transporter protein;Parent=GCA000010485_03974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000345436.1,SO:0001217,UniParc:UPI0001C22F92,UniRef:UniRef100_A0A7I0KVY1,UniRef:UniRef50_D2TUW6,UniRef:UniRef90_A0A246NTW5
contig_1	Pyrodigal	gene	4048432	4049334	.	-	.	ID=GCA000010485_03975_gene;locus_tag=GCA000010485_03975;gene=yihR
contig_1	Pyrodigal	CDS	4048432	4049334	.	-	0	ID=GCA000010485_03975;Name=aldose-1-epimerase;locus_tag=GCA000010485_03975;product=aldose-1-epimerase;Dbxref=GO:0004034,GO:0006006,GO:0030246,GO:0033499,GO:0044010,GO:1902777;gene=yihR;Parent=GCA000010485_03975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001167545.1,SO:0001217,UniParc:UPI0001887956,UniRef:UniRef100_A0A0J8XIE5,UniRef:UniRef50_P32139,UniRef:UniRef90_P32139
contig_1	Pyrodigal	gene	4049401	4050642	.	-	.	ID=GCA000010485_03976_gene;locus_tag=GCA000010485_03976;gene=yihS
contig_1	Pyrodigal	CDS	4049401	4050642	.	-	0	ID=GCA000010485_03976;Name=sulfoquinovose isomerase;locus_tag=GCA000010485_03976;product=sulfoquinovose isomerase;Dbxref=GO:0005975,GO:0061593,GO:0061720;gene=yihS;Parent=GCA000010485_03976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000870946,KEGG:K18479,RefSeq:WP_000870894.1,SO:0001217,UniParc:UPI0001C22F93,UniRef:UniRef100_A0A0K4HH75,UniRef:UniRef50_Q8ZKT7,UniRef:UniRef90_Q8ZKT7;ec_number=5.3.1.31
contig_1	Pyrodigal	gene	4050658	4051536	.	-	.	ID=GCA000010485_03977_gene;locus_tag=GCA000010485_03977;gene=yihT
contig_1	Pyrodigal	CDS	4050658	4051536	.	-	0	ID=GCA000010485_03977;Name=sulfofructosephosphate aldolase;locus_tag=GCA000010485_03977;product=sulfofructosephosphate aldolase;Dbxref=GO:0061595,GO:1902777;gene=yihT;Parent=GCA000010485_03977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001067413,BlastRules:WP_001067421,KEGG:K01671,RefSeq:WP_001046461.1,SO:0001217,UniParc:UPI00000D0951,UniRef:UniRef100_Q8X8D5,UniRef:UniRef50_P32141,UniRef:UniRef90_P32141;ec_number=4.1.2.57
contig_1	Pyrodigal	gene	4051560	4052456	.	-	.	ID=GCA000010485_03978_gene;locus_tag=GCA000010485_03978;gene=yihU
contig_1	Pyrodigal	CDS	4051560	4052456	.	-	0	ID=GCA000010485_03978;Name=sulfolactaldehyde 3-reductase;locus_tag=GCA000010485_03978;product=sulfolactaldehyde 3-reductase;Dbxref=GO:0016491,GO:0050661,GO:0051287,GO:0061596,GO:1902777;gene=yihU;Parent=GCA000010485_03978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000718885.1,SO:0001217,UniParc:UPI0001887785,UniRef:UniRef100_A0A2P6ID23,UniRef:UniRef50_P0A9V8,UniRef:UniRef90_P0A9V8;ec_number=1.1.1.373
contig_1	Pyrodigal	gene	4052624	4053520	.	+	.	ID=GCA000010485_03979_gene;locus_tag=GCA000010485_03979;gene=yihV
contig_1	Pyrodigal	CDS	4052624	4053520	.	+	0	ID=GCA000010485_03979;Name=sulfofructose kinase;locus_tag=GCA000010485_03979;product=sulfofructose kinase;Dbxref=GO:0005524,GO:0005829,GO:0016301,GO:0046835,GO:0061594,GO:0061720,GO:1902777;gene=yihV;Parent=GCA000010485_03979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000621656,RefSeq:WP_000621627.1,SO:0001217,UniParc:UPI0001C22F94,UniRef:UniRef100_A0A7I0KVX4,UniRef:UniRef50_P32143,UniRef:UniRef90_P32143;ec_number=2.7.1.184
contig_1	Pyrodigal	gene	4053554	4054339	.	+	.	ID=GCA000010485_03980_gene;locus_tag=GCA000010485_03980;gene=csqR
contig_1	Pyrodigal	CDS	4053554	4054339	.	+	0	ID=GCA000010485_03980;Name=HTH-type transcriptional repressor CsqR;locus_tag=GCA000010485_03980;product=HTH-type transcriptional repressor CsqR;Dbxref=GO:0003677,GO:0003700,GO:2000143;gene=csqR;Parent=GCA000010485_03980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27243,RefSeq:WP_000059675.1,SO:0001217,UniParc:UPI0001C22F95,UniRef:UniRef100_A0A7I0KVX6,UniRef:UniRef50_P32144,UniRef:UniRef90_P32144
contig_1	Pyrodigal	gene	4054438	4055037	.	+	.	ID=GCA000010485_03981_gene;locus_tag=GCA000010485_03981;gene=yihX
contig_1	Pyrodigal	CDS	4054438	4055037	.	+	0	ID=GCA000010485_03981;Name=glucose-1-phosphatase;locus_tag=GCA000010485_03981;product=glucose-1-phosphatase;gene=yihX;Parent=GCA000010485_03981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298594.1,SO:0001217,UniParc:UPI00005EFC26,UniRef:UniRef100_A0A0K5HSZ8,UniRef:UniRef50_P0A8Y3,UniRef:UniRef90_A0A0K5HSZ8;ec_number=3.1.3.10
contig_1	Pyrodigal	gene	4055031	4055903	.	+	.	ID=GCA000010485_03982_gene;locus_tag=GCA000010485_03982;gene=yihY
contig_1	Pyrodigal	CDS	4055031	4055903	.	+	0	ID=GCA000010485_03982;Name=virulence factor BrkB family protein;locus_tag=GCA000010485_03982;product=virulence factor BrkB family protein;Dbxref=GO:0005886;gene=yihY;Parent=GCA000010485_03982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_000920763.1,SO:0001217,UniParc:UPI0001C22F96,UniRef:UniRef100_A0A3K2YH19,UniRef:UniRef50_P0A8K8,UniRef:UniRef90_P0A8K8
contig_1	Pyrodigal	gene	4055900	4056337	.	+	.	ID=GCA000010485_03983_gene;locus_tag=GCA000010485_03983;gene=dtd
contig_1	Pyrodigal	CDS	4055900	4056337	.	+	0	ID=GCA000010485_03983;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000010485_03983;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000010485_03983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_000560981.1,SO:0001217,UniParc:UPI0001C22F97,UniRef:UniRef100_A0A061L1I5,UniRef:UniRef50_P0A6M4,UniRef:UniRef90_P0A6M4;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	4056382	4057323	.	+	.	ID=GCA000010485_03984_gene;locus_tag=GCA000010485_03984;gene=fabY
contig_1	Pyrodigal	CDS	4056382	4057323	.	+	0	ID=GCA000010485_03984;Name=fatty acid biosynthesis protein FabY;locus_tag=GCA000010485_03984;product=fatty acid biosynthesis protein FabY;Dbxref=GO:0006633,GO:0016747;gene=fabY;Parent=GCA000010485_03984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001297068,COG:COG2153,COG:R,RefSeq:WP_001297068.1,SO:0001217,UniParc:UPI00005EEC3A,UniRef:UniRef100_P0ADQ2,UniRef:UniRef50_P0ADQ2,UniRef:UniRef90_P0ADQ2;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	4057387	4058295	.	-	.	ID=GCA000010485_03985_gene;locus_tag=GCA000010485_03985
contig_1	Pyrodigal	CDS	4057387	4058295	.	-	0	ID=GCA000010485_03985;Name=Alpha/beta hydrolase;locus_tag=GCA000010485_03985;product=Alpha/beta hydrolase;Parent=GCA000010485_03985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001331553.1,SO:0001217,UniParc:UPI0001A670CE,UniRef:UniRef100_A0A0D6HFE0,UniRef:UniRef50_A0A066R8A3,UniRef:UniRef90_A0A066R8A3
contig_1	Pyrodigal	gene	4058837	4059127	.	+	.	ID=GCA000010485_03986_gene;locus_tag=GCA000010485_03986
contig_1	Pyrodigal	CDS	4058837	4059127	.	+	0	ID=GCA000010485_03986;Name=Antitoxin HigA-2;locus_tag=GCA000010485_03986;product=Antitoxin HigA-2;Parent=GCA000010485_03986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356397.1,SO:0001217,UniParc:UPI000004392A,UniRef:UniRef100_E2QIR9,UniRef:UniRef50_Q5ZRG8,UniRef:UniRef90_E2QIR9
contig_1	Pyrodigal	gene	4059212	4059424	.	+	.	ID=GCA000010485_03987_gene;locus_tag=GCA000010485_03987
contig_1	Pyrodigal	CDS	4059212	4059424	.	+	0	ID=GCA000010485_03987;Name=SWIM-type domain-containing protein;locus_tag=GCA000010485_03987;product=SWIM-type domain-containing protein;Parent=GCA000010485_03987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E8B28C,UniRef:UniRef100_A0A3K0QHS2,UniRef:UniRef50_A0A1W6B5R7,UniRef:UniRef90_A0A061LC32
contig_1	Pyrodigal	gene	4059486	4059764	.	+	.	ID=GCA000010485_03988_gene;locus_tag=GCA000010485_03988
contig_1	Pyrodigal	CDS	4059486	4059764	.	+	0	ID=GCA000010485_03988;Name=hypothetical protein;locus_tag=GCA000010485_03988;product=hypothetical protein;Parent=GCA000010485_03988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296612.1,SO:0001217,UniParc:UPI000004392B,UniRef:UniRef100_E2QIS0,UniRef:UniRef50_B7LVF9,UniRef:UniRef90_E2QIS0
contig_1	Pyrodigal	gene	4060161	4060379	.	+	.	ID=GCA000010485_03989_gene;locus_tag=GCA000010485_03989
contig_1	Pyrodigal	CDS	4060161	4060379	.	+	0	ID=GCA000010485_03989;Name=Ribbon-helix-helix domain-containing protein;locus_tag=GCA000010485_03989;product=Ribbon-helix-helix domain-containing protein;Parent=GCA000010485_03989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251293.1,SO:0001217,UniParc:UPI00021856D0,UniRef:UniRef100_A0A066T1B7,UniRef:UniRef50_B7LVF8,UniRef:UniRef90_A0A066T1B7
contig_1	Pyrodigal	gene	4060564	4061304	.	-	.	ID=GCA000010485_03990_gene;locus_tag=GCA000010485_03990
contig_1	Pyrodigal	CDS	4060564	4061304	.	-	0	ID=GCA000010485_03990;Name=hypothetical protein;locus_tag=GCA000010485_03990;product=hypothetical protein;Parent=GCA000010485_03990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000608806.1,SO:0001217,UniParc:UPI0001C22F9B,UniRef:UniRef100_A0AAF0NJ18,UniRef:UniRef50_A0A4C7AJZ4,UniRef:UniRef90_A0A4C7AJZ4
contig_1	Pyrodigal	gene	4061329	4062177	.	-	.	ID=GCA000010485_03991_gene;locus_tag=GCA000010485_03991
contig_1	Pyrodigal	CDS	4061329	4062177	.	-	0	ID=GCA000010485_03991;Name=DUF6708 domain-containing protein;locus_tag=GCA000010485_03991;product=DUF6708 domain-containing protein;Parent=GCA000010485_03991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001038651.1,SO:0001217,UniParc:UPI0001C22F9C,UniRef:UniRef100_A0A3K2RL26,UniRef:UniRef50_A0A7Z7YM21,UniRef:UniRef90_A0A061KZN2
contig_1	Pyrodigal	gene	4062467	4062709	.	+	.	ID=GCA000010485_03992_gene;locus_tag=GCA000010485_03992;gene=copG
contig_1	Pyrodigal	CDS	4062467	4062709	.	+	0	ID=GCA000010485_03992;Name=CopG family transcriptional regulator;locus_tag=GCA000010485_03992;product=CopG family transcriptional regulator;gene=copG;Parent=GCA000010485_03992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001068515.1,SO:0001217,UniParc:UPI0001C22F9D,UniRef:UniRef100_A0A3K0JY15,UniRef:UniRef50_E3G5J9,UniRef:UniRef90_A0A2K3TRA5
contig_1	Pyrodigal	gene	4062891	4063820	.	-	.	ID=GCA000010485_03993_gene;locus_tag=GCA000010485_03993;gene=fdhE
contig_1	Pyrodigal	CDS	4062891	4063820	.	-	0	ID=GCA000010485_03993;Name=formate dehydrogenase accessory protein FdhE;locus_tag=GCA000010485_03993;product=formate dehydrogenase accessory protein FdhE;Dbxref=GO:0005829,GO:0008199,GO:0051604;gene=fdhE;Parent=GCA000010485_03993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG3058,RefSeq:WP_000027696.1,SO:0001217,UniParc:UPI0001C22F9E,UniRef:UniRef100_A0A066T1C1,UniRef:UniRef50_P13024,UniRef:UniRef90_P13024
contig_1	Pyrodigal	gene	4063817	4064452	.	-	.	ID=GCA000010485_03994_gene;locus_tag=GCA000010485_03994;gene=fdoI
contig_1	Pyrodigal	CDS	4063817	4064452	.	-	0	ID=GCA000010485_03994;Name=formate dehydrogenase cytochrome b556 subunit;locus_tag=GCA000010485_03994;product=formate dehydrogenase cytochrome b556 subunit;Dbxref=GO:0005886,GO:0006788,GO:0006974,GO:0008863,GO:0009055,GO:0009061,GO:0009326,GO:0015944,GO:0016020,GO:0019645,GO:0036397,GO:0045333,GO:0046872;gene=fdoI;Parent=GCA000010485_03994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2864,RefSeq:WP_000829013.1,SO:0001217,UniParc:UPI000012A601,UniRef:UniRef100_P0AEL0,UniRef:UniRef50_P0AEL0,UniRef:UniRef90_P0AEL0;ec_number=1.17.5.3
contig_1	Pyrodigal	gene	4064449	4065351	.	-	.	ID=GCA000010485_03995_gene;locus_tag=GCA000010485_03995;gene=fdoH
contig_1	Pyrodigal	CDS	4064449	4065351	.	-	0	ID=GCA000010485_03995;Name=formate dehydrogenase O subunit beta;locus_tag=GCA000010485_03995;product=formate dehydrogenase O subunit beta;Dbxref=GO:0005886,GO:0008863,GO:0015944,GO:0016020,GO:0045333,GO:0046872,GO:0051539;gene=fdoH;Parent=GCA000010485_03995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000331377,COG:C,COG:COG0437,RefSeq:WP_000331383.1,SO:0001217,UniParc:UPI0001C22F9F,UniRef:UniRef100_A0A066T5A6,UniRef:UniRef50_P0AAJ3,UniRef:UniRef90_P0AAJ5;ec_number=1.17.5.3
contig_1	Pyrodigal	gene	4065364	4068414	.	-	.	ID=GCA000010485_03996_gene;locus_tag=GCA000010485_03996;gene=fdnG
contig_1	Pyrodigal	CDS	4065364	4068414	.	-	0	ID=GCA000010485_03996;Name=formate dehydrogenase-N subunit alpha;locus_tag=GCA000010485_03996;product=formate dehydrogenase-N subunit alpha;Dbxref=GO:0005829,GO:0005886,GO:0006788,GO:0006974,GO:0008863,GO:0009055,GO:0009061,GO:0009326,GO:0015942,GO:0015944,GO:0016020,GO:0019645,GO:0030151,GO:0036397,GO:0042597,GO:0043546,GO:0045333,GO:0047111,GO:0051539;gene=fdnG;Parent=GCA000010485_03996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_012579028.1,SO:0001217,UniParc:UPI000187C1CA,UniRef:UniRef100_A0A2G8Z162,UniRef:UniRef50_P32176,UniRef:UniRef90_P32176,codon on position 196 is a selenocysteine codon;ec_number=1.17.5.3;transl_except=(pos:complement(4067827..4067829)%2Caa:Sec)
contig_1	Infernal	regulatory_region	4067774	4067832	2.3e-13	-	.	ID=EFPPCJGBKI_312;Name=Selenocysteine insertion sequence 3;product=Selenocysteine insertion sequence 3;Dbxref=RFAM:RF01989;inference=profile:Rfam:RF01989;Note=SO:1001268;regulatory_class=recoding_stimulatory_region
contig_1	Pyrodigal	gene	4068608	4069444	.	+	.	ID=GCA000010485_03997_gene;locus_tag=GCA000010485_03997;gene=fdhD
contig_1	Pyrodigal	CDS	4068608	4069444	.	+	0	ID=GCA000010485_03997;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000010485_03997;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0009061,GO:0009326,GO:0015942,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000010485_03997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_000753590.1,SO:0001217,UniParc:UPI000187C1CB,UniRef:UniRef100_B7UNL4,UniRef:UniRef50_P32177,UniRef:UniRef90_P32177
contig_1	Pyrodigal	gene	4069755	4071590	.	+	.	ID=GCA000010485_03998_gene;locus_tag=GCA000010485_03998;gene=htpG
contig_1	Pyrodigal	CDS	4069755	4071590	.	+	0	ID=GCA000010485_03998;Name=Molecular chaperone HtpG;locus_tag=GCA000010485_03998;product=Molecular chaperone HtpG;gene=htpG;Parent=GCA000010485_03998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000105776.1,SO:0001217,UniParc:UPI0001C22FA0,UniRef:UniRef100_A0A3K0QHM9,UniRef:UniRef50_K8AGC5,UniRef:UniRef90_A0A7U9DCM9
contig_1	Pyrodigal	gene	4071592	4073898	.	+	.	ID=GCA000010485_03999_gene;locus_tag=GCA000010485_03999
contig_1	Pyrodigal	CDS	4071592	4073898	.	+	0	ID=GCA000010485_03999;Name=Tetratricopeptide repeat protein;locus_tag=GCA000010485_03999;product=Tetratricopeptide repeat protein;Parent=GCA000010485_03999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000382017.1,SO:0001217,UniParc:UPI0001C22FA1,UniRef:UniRef100_A0A641BJA9,UniRef:UniRef50_A0A748V2W9,UniRef:UniRef90_B7LVF1
contig_1	Pyrodigal	gene	4074118	4075161	.	+	.	ID=GCA000010485_04000_gene;locus_tag=GCA000010485_04000
contig_1	Pyrodigal	CDS	4074118	4075161	.	+	0	ID=GCA000010485_04000;Name=DUF3829 domain-containing protein;locus_tag=GCA000010485_04000;product=DUF3829 domain-containing protein;Parent=GCA000010485_04000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545702.1,SO:0001217,UniParc:UPI0001C22FA2,UniRef:UniRef100_A0A641E1S7,UniRef:UniRef50_P32151,UniRef:UniRef90_A0A641E1S7
contig_1	Pyrodigal	gene	4075263	4077011	.	-	.	ID=GCA000010485_04001_gene;locus_tag=GCA000010485_04001;gene=frvR
contig_1	Pyrodigal	CDS	4075263	4077011	.	-	0	ID=GCA000010485_04001;Name=putative frv operon regulatory protein;locus_tag=GCA000010485_04001;product=putative frv operon regulatory protein;Dbxref=GO:0003677,GO:0016301,GO:0022857,GO:0055085;gene=frvR;Parent=GCA000010485_04001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000931287.1,SO:0001217,UniParc:UPI0001C22FA3,UniRef:UniRef100_UPI0001C22FA3,UniRef:UniRef50_P32152,UniRef:UniRef90_P32152
contig_1	Pyrodigal	gene	4077011	4078081	.	-	.	ID=GCA000010485_04002_gene;locus_tag=GCA000010485_04002;gene=frvX
contig_1	Pyrodigal	CDS	4077011	4078081	.	-	0	ID=GCA000010485_04002;Name=aminopeptidase;locus_tag=GCA000010485_04002;product=aminopeptidase;Dbxref=GO:0004177,GO:0006508,GO:0008237,GO:0046872;gene=frvX;Parent=GCA000010485_04002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18530,RefSeq:WP_001019478.1,SO:0001217,UniParc:UPI0001C22FA4,UniRef:UniRef100_A0A641E4H3,UniRef:UniRef50_P32153,UniRef:UniRef90_P32153;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	4078071	4079522	.	-	.	ID=GCA000010485_04003_gene;locus_tag=GCA000010485_04003;gene=frvB
contig_1	Pyrodigal	CDS	4078071	4079522	.	-	0	ID=GCA000010485_04003;Name=PTS fructose-like transporter subunit IIBC;locus_tag=GCA000010485_04003;product=PTS fructose-like transporter subunit IIBC;Dbxref=GO:0005351,GO:0005886,GO:0009401,GO:0016301,GO:0022877,GO:0090563,GO:1902495,GO:1990539;gene=frvB;Parent=GCA000010485_04003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1445,COG:G,RefSeq:WP_000446043.1,SO:0001217,UniParc:UPI0001C22FA5,UniRef:UniRef100_A0A3K2UUP9,UniRef:UniRef50_P32154,UniRef:UniRef90_P32154;ec_number=2.7.1.202
contig_1	Pyrodigal	gene	4079533	4079979	.	-	.	ID=GCA000010485_04004_gene;locus_tag=GCA000010485_04004
contig_1	Pyrodigal	CDS	4079533	4079979	.	-	0	ID=GCA000010485_04004;Name=PTS fructose transporter subunit IIA;locus_tag=GCA000010485_04004;product=PTS fructose transporter subunit IIA;Parent=GCA000010485_04004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000729616.1,SO:0001217,UniParc:UPI0001C22FA6,UniRef:UniRef100_A0A3L4RTN4,UniRef:UniRef50_P32155,UniRef:UniRef90_A0A1M2HZX7
contig_1	Pyrodigal	gene	4080455	4081849	.	+	.	ID=GCA000010485_04005_gene;locus_tag=GCA000010485_04005
contig_1	Pyrodigal	CDS	4080455	4081849	.	+	0	ID=GCA000010485_04005;Name=Porin;locus_tag=GCA000010485_04005;product=Porin;Parent=GCA000010485_04005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000749949.1,SO:0001217,UniParc:UPI0001C22EC4,UniRef:UniRef100_A0A641E3M4,UniRef:UniRef50_A0A5J5G1L4,UniRef:UniRef90_E2QIS8
contig_1	Pyrodigal	gene	4081890	4082204	.	-	.	ID=GCA000010485_04006_gene;locus_tag=GCA000010485_04006;gene=rhaM
contig_1	Pyrodigal	CDS	4081890	4082204	.	-	0	ID=GCA000010485_04006;Name=L-rhamnose mutarotase;locus_tag=GCA000010485_04006;product=L-rhamnose mutarotase;Dbxref=GO:0005737,GO:0016857,GO:0019299,GO:0019301,GO:0062192;gene=rhaM;Parent=GCA000010485_04006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3254,COG:M,KEGG:K03534,RefSeq:WP_000619499.1,SO:0001217,UniParc:UPI0001C22EC5,UniRef:UniRef100_A0A066T9Q8,UniRef:UniRef50_P32156,UniRef:UniRef90_Q8X8A2;ec_number=5.1.3.32
contig_1	Pyrodigal	gene	4082214	4083038	.	-	.	ID=GCA000010485_04007_gene;locus_tag=GCA000010485_04007;gene=rhaD
contig_1	Pyrodigal	CDS	4082214	4083038	.	-	0	ID=GCA000010485_04007;Name=rhamnulose-1-phosphate aldolase;locus_tag=GCA000010485_04007;product=rhamnulose-1-phosphate aldolase;Dbxref=GO:0005829,GO:0008994,GO:0019301,GO:0019323,GO:0046872;gene=rhaD;Parent=GCA000010485_04007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,KEGG:K01629,RefSeq:WP_001179746.1,SO:0001217,UniParc:UPI0001C22EC6,UniRef:UniRef100_A0A066T1D0,UniRef:UniRef50_P32169,UniRef:UniRef90_P32169;ec_number=4.1.2.19
contig_1	Pyrodigal	gene	4083121	4084380	.	-	.	ID=GCA000010485_04008_gene;locus_tag=GCA000010485_04008;gene=rhaA
contig_1	Pyrodigal	CDS	4083121	4084380	.	-	0	ID=GCA000010485_04008;Name=L-rhamnose isomerase;locus_tag=GCA000010485_04008;product=L-rhamnose isomerase;Dbxref=GO:0005737,GO:0008740,GO:0019299,GO:0019301,GO:0019324,GO:0030145;gene=rhaA;Parent=GCA000010485_04008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4806,COG:G,KEGG:K01813,RefSeq:WP_001545704.1,SO:0001217,UniParc:UPI0001C22EC7,UniRef:UniRef100_A0A3K3S8J8,UniRef:UniRef50_P32170,UniRef:UniRef90_Q83IU4;ec_number=5.3.1.14
contig_1	Pyrodigal	gene	4084377	4085846	.	-	.	ID=GCA000010485_04009_gene;locus_tag=GCA000010485_04009;gene=rhaB
contig_1	Pyrodigal	CDS	4084377	4085846	.	-	0	ID=GCA000010485_04009;Name=rhamnulokinase;locus_tag=GCA000010485_04009;product=rhamnulokinase;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0005975,GO:0006071,GO:0008993,GO:0019301;gene=rhaB;Parent=GCA000010485_04009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00848,RefSeq:WP_000144100.1,SO:0001217,UniParc:UPI0001C22EC8,UniRef:UniRef100_A0A066T5B3,UniRef:UniRef50_P32171,UniRef:UniRef90_P32171;ec_number=2.7.1.5
contig_1	Pyrodigal	gene	4086134	4086970	.	+	.	ID=GCA000010485_04010_gene;locus_tag=GCA000010485_04010;gene=rhaS
contig_1	Pyrodigal	CDS	4086134	4086970	.	+	0	ID=GCA000010485_04010;Name=HTH-type transcriptional activator RhaS;locus_tag=GCA000010485_04010;product=HTH-type transcriptional activator RhaS;Dbxref=GO:0003700,GO:0005737,GO:0006355,GO:0019299,GO:0043565,GO:0045893;gene=rhaS;Parent=GCA000010485_04010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4977,COG:K,RefSeq:WP_000217156.1,SO:0001217,UniParc:UPI00005EF97F,UniRef:UniRef100_B7UNM6,UniRef:UniRef50_P09377,UniRef:UniRef90_P09377
contig_1	Pyrodigal	gene	4086954	4087892	.	+	.	ID=GCA000010485_04011_gene;locus_tag=GCA000010485_04011;gene=rhaR
contig_1	Pyrodigal	CDS	4086954	4087892	.	+	0	ID=GCA000010485_04011;Name=HTH-type transcriptional activator RhaR;locus_tag=GCA000010485_04011;product=HTH-type transcriptional activator RhaR;Dbxref=GO:0003700,GO:0006355;gene=rhaR;Parent=GCA000010485_04011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02854,SO:0001217,UniParc:UPI00004F6F61,UniRef:UniRef100_J7QJ19,UniRef:UniRef50_P40865,UniRef:UniRef90_J7QJ19
contig_1	Pyrodigal	gene	4087889	4088923	.	-	.	ID=GCA000010485_04012_gene;locus_tag=GCA000010485_04012;gene=rhaT
contig_1	Pyrodigal	CDS	4087889	4088923	.	-	0	ID=GCA000010485_04012;Name=L-rhamnose/proton symporter RhaT;locus_tag=GCA000010485_04012;product=L-rhamnose/proton symporter RhaT;Dbxref=GO:0005886,GO:0008645,GO:0015153,GO:0015293;gene=rhaT;Parent=GCA000010485_04012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000063507.1,SO:0001217,UniParc:UPI00000DF328,UniRef:UniRef100_B7UNM8,UniRef:UniRef50_B7UNM8,UniRef:UniRef90_B7UNM8
contig_1	Pyrodigal	gene	4089208	4089828	.	+	.	ID=GCA000010485_04013_gene;locus_tag=GCA000010485_04013;gene=sodA
contig_1	Pyrodigal	CDS	4089208	4089828	.	+	0	ID=GCA000010485_04013;Name=superoxide dismutase [Mn];locus_tag=GCA000010485_04013;product=superoxide dismutase [Mn];Dbxref=GO:0004784,GO:0005737,GO:0006801,GO:0046872;gene=sodA;Parent=GCA000010485_04013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_001340151.1,SO:0001217,UniParc:UPI000187C037,UniRef:UniRef100_A0A2X8I1C3,UniRef:UniRef50_P00448,UniRef:UniRef90_P00448;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	4090088	4091071	.	+	.	ID=GCA000010485_04014_gene;locus_tag=GCA000010485_04014;gene=kdgT
contig_1	Pyrodigal	CDS	4090088	4091071	.	+	0	ID=GCA000010485_04014;Name=2-keto-3-deoxygluconate transporter;locus_tag=GCA000010485_04014;product=2-keto-3-deoxygluconate transporter;Dbxref=GO:0005886,GO:0015649,GO:0016020,GO:0046411;gene=kdgT;Parent=GCA000010485_04014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02526,RefSeq:WP_001166043.1,SO:0001217,UniParc:UPI000188842E,UniRef:UniRef100_B7NU97,UniRef:UniRef50_P0A712,UniRef:UniRef90_P0A712
contig_1	Pyrodigal	gene	4091220	4091894	.	+	.	ID=GCA000010485_04015_gene;locus_tag=GCA000010485_04015;gene=yiiM
contig_1	Pyrodigal	CDS	4091220	4091894	.	+	0	ID=GCA000010485_04015;Name=6-hydroxyaminopurine reductase;locus_tag=GCA000010485_04015;product=6-hydroxyaminopurine reductase;Dbxref=GO:0003824,GO:0005829,GO:0009407,GO:0009636,GO:0016661,GO:0030151,GO:0030170,GO:0042803;gene=yiiM;Parent=GCA000010485_04015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2258,COG:FV,RefSeq:WP_001270237.1,SO:0001217,UniParc:UPI00016088DD,UniRef:UniRef100_A0A0D8VIT3,UniRef:UniRef50_P32157,UniRef:UniRef90_P32157
contig_1	Infernal	gene	4091907	4091984	.	-	.	ID=GCA000010485_04016_gene;locus_tag=GCA000010485_04016;gene=naRNA4
contig_1	Infernal	ncRNA	4091907	4091984	3.4e-12	-	.	ID=GCA000010485_04016;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04016;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04016_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4091999	4093372	.	-	.	ID=GCA000010485_04017_gene;locus_tag=GCA000010485_04017;gene=cpxA
contig_1	Pyrodigal	CDS	4091999	4093372	.	-	0	ID=GCA000010485_04017;Name=envelope stress sensor histidine kinase CpxA;locus_tag=GCA000010485_04017;product=envelope stress sensor histidine kinase CpxA;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007155,GO:0007165;gene=cpxA;Parent=GCA000010485_04017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,KEGG:K07640,RefSeq:WP_000580417.1,SO:0001217,UniParc:UPI000012832E,UniRef:UniRef100_P0AE82,UniRef:UniRef50_P0AE82,UniRef:UniRef90_P0AE82;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	4093369	4094067	.	-	.	ID=GCA000010485_04018_gene;locus_tag=GCA000010485_04018;gene=cpxR
contig_1	Pyrodigal	CDS	4093369	4094067	.	-	0	ID=GCA000010485_04018;Name=envelope stress response regulator transcription factor CpxR;locus_tag=GCA000010485_04018;product=envelope stress response regulator transcription factor CpxR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=cpxR;Parent=GCA000010485_04018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001033720.1,SO:0001217,UniParc:UPI0000D50E19,UniRef:UniRef100_A0A061YIR2,UniRef:UniRef50_P0AE88,UniRef:UniRef90_P0AE88
contig_1	Pyrodigal	gene	4094217	4094717	.	+	.	ID=GCA000010485_04019_gene;locus_tag=GCA000010485_04019;gene=cpxP
contig_1	Pyrodigal	CDS	4094217	4094717	.	+	0	ID=GCA000010485_04019;Name=cell-envelope stress modulator CpxP;locus_tag=GCA000010485_04019;product=cell-envelope stress modulator CpxP;Dbxref=GO:0030288,GO:0051082;gene=cpxP;Parent=GCA000010485_04019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3678,COG:O,KEGG:K06006,RefSeq:WP_001223800.1,SO:0001217,UniParc:UPI000012833C,UniRef:UniRef100_P0AE85,UniRef:UniRef50_P0AE85,UniRef:UniRef90_P0AE85
contig_1	Pyrodigal	gene	4094866	4095768	.	+	.	ID=GCA000010485_04020_gene;locus_tag=GCA000010485_04020;gene=fieF
contig_1	Pyrodigal	CDS	4094866	4095768	.	+	0	ID=GCA000010485_04020;Name=CDF family cation-efflux transporter FieF;locus_tag=GCA000010485_04020;product=CDF family cation-efflux transporter FieF;Dbxref=GO:0005886,GO:0006812,GO:0006882,GO:0008324,GO:0015086,GO:0015093,GO:0015297,GO:0015341,GO:0016020,GO:0046872,GO:0055085;gene=fieF;Parent=GCA000010485_04020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001076748,BlastRules:WP_003093118,COG:COG0053,COG:P,KEGG:K13283,NCBIProtein:BAE77395.1,RefSeq:WP_001076751.1,SO:0001217,UniParc:UPI0001C22EC9,UniRef:UniRef100_A0A7I0KVT9,UniRef:UniRef50_P69380,UniRef:UniRef90_P69380
contig_1	Pyrodigal	gene	4095714	4095818	.	-	.	ID=GCA000010485_04021_gene;locus_tag=GCA000010485_04021
contig_1	Pyrodigal	CDS	4095714	4095818	.	-	0	ID=GCA000010485_04021;Name=hypothetical protein;locus_tag=GCA000010485_04021;product=hypothetical protein;Parent=GCA000010485_04021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001F8C5C4,UniRef:UniRef100_J7QY55,UniRef:UniRef50_J7QY55,UniRef:UniRef90_J7QY55
contig_1	Pyrodigal	gene	4095949	4096911	.	+	.	ID=GCA000010485_04022_gene;locus_tag=GCA000010485_04022;gene=pfkA
contig_1	Pyrodigal	CDS	4095949	4096911	.	+	0	ID=GCA000010485_04022;Name=6-phosphofructokinase;locus_tag=GCA000010485_04022;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0016208,GO:0030388,GO:0042802,GO:0046872,GO:0048029,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000010485_04022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,KEGG:K00850,RefSeq:WP_000591795.1,SO:0001217,UniParc:UPI0000112942,UniRef:UniRef100_P0A796,UniRef:UniRef50_P0A796,UniRef:UniRef90_P0A796;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	4097231	4098220	.	+	.	ID=GCA000010485_04023_gene;locus_tag=GCA000010485_04023;gene=sbp
contig_1	Pyrodigal	CDS	4097231	4098220	.	+	0	ID=GCA000010485_04023;Name=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;locus_tag=GCA000010485_04023;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;Dbxref=GO:0042597,GO:1901681,GO:1902358;gene=sbp;Parent=GCA000010485_04023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001045689,COG:COG1613,COG:P,KEGG:K23163,RefSeq:WP_000758732.1,SO:0001217,UniParc:UPI0001C22ECA,UniRef:UniRef100_A0A061YJV0,UniRef:UniRef50_P0AG78,UniRef:UniRef90_P0AG78
contig_1	Pyrodigal	gene	4098327	4099082	.	+	.	ID=GCA000010485_04024_gene;locus_tag=GCA000010485_04024;gene=cdh
contig_1	Pyrodigal	CDS	4098327	4099082	.	+	0	ID=GCA000010485_04024;Name=CDP-diacylglycerol diphosphatase;locus_tag=GCA000010485_04024;product=CDP-diacylglycerol diphosphatase;Dbxref=GO:0005886,GO:0008654,GO:0008715,GO:0016020,GO:0046342;gene=cdh;Parent=GCA000010485_04024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01521,RefSeq:WP_001296622.1,SO:0001217,UniParc:UPI0001C22ECB,UniRef:UniRef100_A0A066T5C3,UniRef:UniRef50_P06282,UniRef:UniRef90_P06282;ec_number=3.6.1.26
contig_1	Pyrodigal	gene	4099137	4099904	.	-	.	ID=GCA000010485_04025_gene;locus_tag=GCA000010485_04025;gene=tpiA
contig_1	Pyrodigal	CDS	4099137	4099904	.	-	0	ID=GCA000010485_04025;Name=triose-phosphate isomerase;locus_tag=GCA000010485_04025;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000010485_04025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,KEGG:K01803,RefSeq:WP_001216325.1,SO:0001217,UniParc:UPI00001371F1,UniRef:UniRef100_P0A858,UniRef:UniRef50_P0A858,UniRef:UniRef90_P0A858;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	4100012	4100611	.	-	.	ID=GCA000010485_04026_gene;locus_tag=GCA000010485_04026;gene=yiiQ
contig_1	Pyrodigal	CDS	4100012	4100611	.	-	0	ID=GCA000010485_04026;Name=putative protein YiiQ;locus_tag=GCA000010485_04026;product=putative protein YiiQ;gene=yiiQ;Parent=GCA000010485_04026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000802235.1,SO:0001217,UniParc:UPI0001C22ECC,UniRef:UniRef100_A0A061KX11,UniRef:UniRef50_P32160,UniRef:UniRef90_P32160
contig_1	Pyrodigal	gene	4100712	4101152	.	+	.	ID=GCA000010485_04027_gene;locus_tag=GCA000010485_04027;gene=yiiR
contig_1	Pyrodigal	CDS	4100712	4101152	.	+	0	ID=GCA000010485_04027;Name=putative protein YiiR;locus_tag=GCA000010485_04027;product=putative protein YiiR;Dbxref=GO:0005886;gene=yiiR;Parent=GCA000010485_04027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_000155252.1,SO:0001217,UniParc:UPI000187C05A,UniRef:UniRef100_A0A061KXS8,UniRef:UniRef50_P0AF34,UniRef:UniRef90_P0AF34
contig_1	Pyrodigal	gene	4101364	4101663	.	+	.	ID=GCA000010485_04028_gene;locus_tag=GCA000010485_04028;gene=yfcZ
contig_1	Pyrodigal	CDS	4101364	4101663	.	+	0	ID=GCA000010485_04028;Name=DUF406 domain-containing protein;locus_tag=GCA000010485_04028;product=DUF406 domain-containing protein;gene=yfcZ;Parent=GCA000010485_04028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3691,COG:S,RefSeq:WP_000655986.1,SO:0001217,UniParc:UPI000000E834,UniRef:UniRef100_C3SJ22,UniRef:UniRef50_P32162,UniRef:UniRef90_Q32A88
contig_1	Pyrodigal	gene	4101690	4102118	.	+	.	ID=GCA000010485_04029_gene;locus_tag=GCA000010485_04029;gene=uspD
contig_1	Pyrodigal	CDS	4101690	4102118	.	+	0	ID=GCA000010485_04029;Name=universal stress protein UspD;locus_tag=GCA000010485_04029;product=universal stress protein UspD;Dbxref=GO:0005737;gene=uspD;Parent=GCA000010485_04029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,KEGG:K14065,RefSeq:WP_000323555.1,SO:0001217,UniParc:UPI00000D0D97,UniRef:UniRef100_P67090,UniRef:UniRef50_P0AAB8,UniRef:UniRef90_P0AAB8
contig_1	Pyrodigal	gene	4102123	4102869	.	-	.	ID=GCA000010485_04030_gene;locus_tag=GCA000010485_04030;gene=fpr
contig_1	Pyrodigal	CDS	4102123	4102869	.	-	0	ID=GCA000010485_04030;Name=ferredoxin--NADP(+) reductase;locus_tag=GCA000010485_04030;product=ferredoxin--NADP(+) reductase;Dbxref=GO:0000104,GO:0000303,GO:0003994,GO:0004324,GO:0005829,GO:0009410,GO:0016226,GO:0034599,GO:0042167,GO:0071949;gene=fpr;Parent=GCA000010485_04030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,RefSeq:WP_000796342.1,SO:0001217,UniParc:UPI0001C22ECD,UniRef:UniRef100_A0A066T9J0,UniRef:UniRef50_P28861,UniRef:UniRef90_P28861;ec_number=1.19.1.1
contig_1	Pyrodigal	gene	4102966	4103976	.	-	.	ID=GCA000010485_04031_gene;locus_tag=GCA000010485_04031;gene=glpX
contig_1	Pyrodigal	CDS	4102966	4103976	.	-	0	ID=GCA000010485_04031;Name=class II fructose-bisphosphatase;locus_tag=GCA000010485_04031;product=class II fructose-bisphosphatase;Dbxref=GO:0005829,GO:0006071,GO:0006094,GO:0030388,GO:0042132,GO:0046872;gene=glpX;Parent=GCA000010485_04031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1494,COG:G,KEGG:K02446,RefSeq:WP_001250644.1,SO:0001217,UniParc:UPI000012B7B8,UniRef:UniRef100_P0A9C9,UniRef:UniRef50_P0A9C9,UniRef:UniRef90_P0A9C9;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	4104147	4105655	.	-	.	ID=GCA000010485_04032_gene;locus_tag=GCA000010485_04032;gene=glpK
contig_1	Pyrodigal	CDS	4104147	4105655	.	-	0	ID=GCA000010485_04032;Name=glycerol kinase GlpK;locus_tag=GCA000010485_04032;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563,GO:0046872;gene=glpK;Parent=GCA000010485_04032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,KEGG:K00864,RefSeq:WP_000136804.1,SO:0001217,UniParc:UPI000187C05C,UniRef:UniRef100_B7UNP6,UniRef:UniRef50_P0A6F3,UniRef:UniRef90_P0A6F3;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	4105678	4106523	.	-	.	ID=GCA000010485_04033_gene;locus_tag=GCA000010485_04033;gene=glpF
contig_1	Pyrodigal	CDS	4105678	4106523	.	-	0	ID=GCA000010485_04033;Name=glycerol uptake facilitator protein GlpF;locus_tag=GCA000010485_04033;product=glycerol uptake facilitator protein GlpF;Dbxref=GO:0005886,GO:0015168,GO:0015254,GO:0015793,GO:0071288;gene=glpF;Parent=GCA000010485_04033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000084268,RefSeq:WP_000084268.1,SO:0001217,UniParc:UPI00001117E2,UniRef:UniRef100_P0AER0,UniRef:UniRef50_P0AER0,UniRef:UniRef90_P0AER0
contig_1	Pyrodigal	gene	4106954	4107193	.	+	.	ID=GCA000010485_04034_gene;locus_tag=GCA000010485_04034;gene=zapB
contig_1	Pyrodigal	CDS	4106954	4107193	.	+	0	ID=GCA000010485_04034;Name=septal ring assembly protein ZapB;locus_tag=GCA000010485_04034;product=septal ring assembly protein ZapB;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=zapB;Parent=GCA000010485_04034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3074,COG:D,RefSeq:WP_001295521.1,SO:0001217,UniParc:UPI000022647A,UniRef:UniRef100_P0AF36,UniRef:UniRef50_P0AF36,UniRef:UniRef90_P0AF36
contig_1	Pyrodigal	gene	4107278	4107763	.	-	.	ID=GCA000010485_04035_gene;locus_tag=GCA000010485_04035;gene=rraA
contig_1	Pyrodigal	CDS	4107278	4107763	.	-	0	ID=GCA000010485_04035;Name=ribonuclease E activity regulator RraA;locus_tag=GCA000010485_04035;product=ribonuclease E activity regulator RraA;Dbxref=GO:0005829,GO:0008428,GO:0019899,GO:0051252,GO:0060698,GO:1902369;gene=rraA;Parent=GCA000010485_04035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0684,COG:J,RefSeq:WP_000872908.1,SO:0001217,UniParc:UPI000012EEFB,UniRef:UniRef100_P0A8R0,UniRef:UniRef50_P0A8R0,UniRef:UniRef90_P0A8R0
contig_1	Pyrodigal	gene	4107856	4108782	.	-	.	ID=GCA000010485_04036_gene;locus_tag=GCA000010485_04036;gene=menA
contig_1	Pyrodigal	CDS	4107856	4108782	.	-	0	ID=GCA000010485_04036;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA000010485_04036;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;Dbxref=GO:0000287,GO:0004659,GO:0005886,GO:0009234,GO:0016020,GO:0032194,GO:0042371,GO:0046428;gene=menA;Parent=GCA000010485_04036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,RefSeq:WP_001305044.1,SO:0001217,UniParc:UPI00005EF984,UniRef:UniRef100_E2QIV7,UniRef:UniRef50_P32166,UniRef:UniRef90_P32166;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	4108849	4110180	.	-	.	ID=GCA000010485_04037_gene;locus_tag=GCA000010485_04037;gene=hslU
contig_1	Pyrodigal	CDS	4108849	4110180	.	-	0	ID=GCA000010485_04037;Name=HslU--HslV peptidase ATPase subunit;locus_tag=GCA000010485_04037;product=HslU--HslV peptidase ATPase subunit;Dbxref=GO:0004176,GO:0005524,GO:0006508,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603;gene=hslU;Parent=GCA000010485_04037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_001293344.1,SO:0001217,UniParc:UPI00000DF336,UniRef:UniRef100_B7UNQ1,UniRef:UniRef50_P0A6H5,UniRef:UniRef90_P0A6H5;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	4110190	4110720	.	-	.	ID=GCA000010485_04038_gene;locus_tag=GCA000010485_04038;gene=hslV
contig_1	Pyrodigal	CDS	4110190	4110720	.	-	0	ID=GCA000010485_04038;Name=ATP-dependent protease subunit HslV;locus_tag=GCA000010485_04038;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA000010485_04038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,RefSeq:WP_000208242.1,SO:0001217,UniParc:UPI0000163A4F,UniRef:UniRef100_P0A7B8,UniRef:UniRef50_P0A7B8,UniRef:UniRef90_P0A7B8;ec_number=3.4.25.2
contig_1	Infernal	regulatory_region	4110718	4110775	1.2e-08	-	.	ID=EFPPCJGBKI_325;Name=ClpQY promoter;product=ClpQY promoter;Dbxref=RFAM:RF02401;inference=profile:Rfam:RF02401;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	4110813	4111667	.	-	.	ID=GCA000010485_04039_gene;locus_tag=GCA000010485_04039;gene=ftsN
contig_1	Pyrodigal	CDS	4110813	4111667	.	-	0	ID=GCA000010485_04039;Name=cell division protein FtsN;locus_tag=GCA000010485_04039;product=cell division protein FtsN;Dbxref=GO:0000917,GO:0000935,GO:0005886,GO:0030428,GO:0032153,GO:0042834,GO:0043093,GO:0051301,GO:1990586;gene=ftsN;Parent=GCA000010485_04039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3087,COG:D,SO:0001217,UniParc:UPI00005EEC4E,UniRef:UniRef100_A0A1L7B1P3,UniRef:UniRef50_P29131,UniRef:UniRef90_P29131
contig_1	Pyrodigal	gene	4111864	4112889	.	-	.	ID=GCA000010485_04040_gene;locus_tag=GCA000010485_04040;gene=cytR
contig_1	Pyrodigal	CDS	4111864	4112889	.	-	0	ID=GCA000010485_04040;Name=DNA-binding transcriptional regulator CytR;locus_tag=GCA000010485_04040;product=DNA-binding transcriptional regulator CytR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355;gene=cytR;Parent=GCA000010485_04040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000644908.1,SO:0001217,UniParc:UPI0001DC45D1,UniRef:UniRef100_A0A061YKL9,UniRef:UniRef50_P0ACN7,UniRef:UniRef90_P0ACN7
contig_1	Pyrodigal	gene	4113045	4115243	.	-	.	ID=GCA000010485_04041_gene;locus_tag=GCA000010485_04041;gene=priA
contig_1	Pyrodigal	CDS	4113045	4115243	.	-	0	ID=GCA000010485_04041;Name=primosomal protein N';locus_tag=GCA000010485_04041;product=primosomal protein N';gene=priA;Parent=GCA000010485_04041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04066,RefSeq:WP_001296625.1,SO:0001217,UniParc:UPI0001C22ECF,UniRef:UniRef100_A0A066T1G4,UniRef:UniRef50_P17888,UniRef:UniRef90_A0A066T1G4;ec_number=5.6.2.4
contig_1	Infernal	regulatory_region	4115387	4115439	1.5e-08	+	.	ID=EFPPCJGBKI_326;Name=L31-Gammaproteobacteria ribosomal protein leader;product=L31-Gammaproteobacteria ribosomal protein leader;Dbxref=RFAM:RF03157;inference=profile:Rfam:RF03157;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	4115446	4115658	.	+	.	ID=GCA000010485_04042_gene;locus_tag=GCA000010485_04042;gene=rpmE
contig_1	Pyrodigal	CDS	4115446	4115658	.	+	0	ID=GCA000010485_04042;Name=50S ribosomal protein L31;locus_tag=GCA000010485_04042;product=50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0046872,GO:1990904;gene=rpmE;Parent=GCA000010485_04042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_000710769.1,SO:0001217,UniParc:UPI0000133F0B,UniRef:UniRef100_P0A7M9,UniRef:UniRef50_P0A7M9,UniRef:UniRef90_P0A7M9
contig_1	Pyrodigal	gene	4115719	4116327	.	-	.	ID=GCA000010485_04043_gene;locus_tag=GCA000010485_04043;gene=yiiX
contig_1	Pyrodigal	CDS	4115719	4116327	.	-	0	ID=GCA000010485_04043;Name=YiiX family permuted papain-like enzyme;locus_tag=GCA000010485_04043;product=YiiX family permuted papain-like enzyme;gene=yiiX;Parent=GCA000010485_04043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000702314.1,SO:0001217,UniParc:UPI0001C22ED0,UniRef:UniRef100_A0A135XYB1,UniRef:UniRef50_P32167,UniRef:UniRef90_P32167
contig_1	Pyrodigal	gene	4116387	4116704	.	-	.	ID=GCA000010485_04044_gene;locus_tag=GCA000010485_04044;gene=metJ
contig_1	Pyrodigal	CDS	4116387	4116704	.	-	0	ID=GCA000010485_04044;Name=met regulon transcriptional regulator MetJ;locus_tag=GCA000010485_04044;product=met regulon transcriptional regulator MetJ;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0009086,GO:0045892;gene=metJ;Parent=GCA000010485_04044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3060,COG:KE,KEGG:K03764,RefSeq:WP_000852812.1,SO:0001217,UniParc:UPI0000165544,UniRef:UniRef100_P0A8U6,UniRef:UniRef50_P0A8U6,UniRef:UniRef90_P0A8U6
contig_1	Pyrodigal	gene	4116981	4118141	.	+	.	ID=GCA000010485_04045_gene;locus_tag=GCA000010485_04045;gene=metB
contig_1	Pyrodigal	CDS	4116981	4118141	.	+	0	ID=GCA000010485_04045;Name=cystathionine gamma-synthase;locus_tag=GCA000010485_04045;product=cystathionine gamma-synthase;Dbxref=GO:0003824,GO:0003962,GO:0004123,GO:0005737,GO:0009086,GO:0019343,GO:0019346,GO:0030170;gene=metB;Parent=GCA000010485_04045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000197203.1,SO:0001217,UniParc:UPI0001C22ED1,UniRef:UniRef100_A0A061L1M8,UniRef:UniRef50_P00935,UniRef:UniRef90_P00935;ec_number=2.5.1.48
contig_1	Pyrodigal	gene	4118144	4120576	.	+	.	ID=GCA000010485_04046_gene;locus_tag=GCA000010485_04046;gene=metL
contig_1	Pyrodigal	CDS	4118144	4120576	.	+	0	ID=GCA000010485_04046;Name=bifunctional aspartate kinase/homoserine dehydrogenase II;locus_tag=GCA000010485_04046;product=bifunctional aspartate kinase/homoserine dehydrogenase II;Dbxref=GO:0004072,GO:0004412,GO:0005524,GO:0005829,GO:0009086,GO:0009088,GO:0009089,GO:0009090,GO:0046872,GO:0050661,GO:0070403;gene=metL;Parent=GCA000010485_04046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000110772,COG:COG0527,COG:E,KEGG:K12525,RefSeq:WP_000110759.1,SO:0001217,UniParc:UPI000187C06F,UniRef:UniRef100_A0A061YCJ1,UniRef:UniRef50_P00562,UniRef:UniRef90_P00562;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	4120540	4121670	.	-	.	ID=GCA000010485_04047_gene;locus_tag=GCA000010485_04047
contig_1	Pyrodigal	CDS	4120540	4121670	.	-	0	ID=GCA000010485_04047;Name=Cytoplasmic protein;locus_tag=GCA000010485_04047;product=Cytoplasmic protein;Parent=GCA000010485_04047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000105529.1,SO:0001217,UniParc:UPI0001C22F2B,UniRef:UniRef100_A0A061YGE2,UniRef:UniRef50_A0A0H3GK84,UniRef:UniRef90_B7LUR2
contig_1	Pyrodigal	gene	4121803	4123356	.	+	.	ID=GCA000010485_04048_gene;locus_tag=GCA000010485_04048
contig_1	Pyrodigal	CDS	4121803	4123356	.	+	0	ID=GCA000010485_04048;Name=Phosphoesterase;locus_tag=GCA000010485_04048;product=Phosphoesterase;Parent=GCA000010485_04048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000694068.1,SO:0001217,UniParc:UPI0001C22F2C,UniRef:UniRef100_A0A066T5E2,UniRef:UniRef50_A0A0H3GLG5,UniRef:UniRef90_B7LUR1
contig_1	Pyrodigal	gene	4123738	4124628	.	+	.	ID=GCA000010485_04049_gene;locus_tag=GCA000010485_04049;gene=metF
contig_1	Pyrodigal	CDS	4123738	4124628	.	+	0	ID=GCA000010485_04049;Name=methylenetetrahydrofolate reductase;locus_tag=GCA000010485_04049;product=methylenetetrahydrofolate reductase;Dbxref=GO:0004489,GO:0005829,GO:0009086,GO:0035999,GO:0071949,GO:0106312;gene=metF;Parent=GCA000010485_04049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_000007515.1,SO:0001217,UniParc:UPI00000DF33E,UniRef:UniRef100_E2QIX3,UniRef:UniRef50_P0AEZ1,UniRef:UniRef90_P0AEZ1;ec_number=1.5.1.54
contig_1	Pyrodigal	gene	4124957	4127137	.	+	.	ID=GCA000010485_04050_gene;locus_tag=GCA000010485_04050;gene=katG
contig_1	Pyrodigal	CDS	4124957	4127137	.	+	0	ID=GCA000010485_04050;Name=catalase/peroxidase HPI;locus_tag=GCA000010485_04050;product=catalase/peroxidase HPI;Dbxref=GO:0004096,GO:0004601,GO:0005829,GO:0006979,GO:0020037,GO:0042744,GO:0046872,GO:0070301;gene=katG;Parent=GCA000010485_04050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0376,COG:P,KEGG:K03782,RefSeq:WP_001296626.1,SO:0001217,UniParc:UPI00005EF98D,UniRef:UniRef100_A1AIC1,UniRef:UniRef50_P13029,UniRef:UniRef90_P13029;ec_number=1.11.1.21
contig_1	Pyrodigal	gene	4127231	4128136	.	+	.	ID=GCA000010485_04051_gene;locus_tag=GCA000010485_04051;gene=yijE
contig_1	Pyrodigal	CDS	4127231	4128136	.	+	0	ID=GCA000010485_04051;Name=cystine transporter YijE;locus_tag=GCA000010485_04051;product=cystine transporter YijE;Dbxref=GO:0000099,GO:0000101,GO:0005886,GO:0016020;gene=yijE;Parent=GCA000010485_04051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001271242,COG:COG0697,COG:GER,RefSeq:WP_001271242.1,SO:0001217,UniParc:UPI000013B428,UniRef:UniRef100_P0ABT8,UniRef:UniRef50_P0ABT8,UniRef:UniRef90_P0ABT8
contig_1	Pyrodigal	gene	4128163	4128780	.	-	.	ID=GCA000010485_04052_gene;locus_tag=GCA000010485_04052;gene=yiijF
contig_1	Pyrodigal	CDS	4128163	4128780	.	-	0	ID=GCA000010485_04052;Name=DUF1287 domain-containing protein;locus_tag=GCA000010485_04052;product=DUF1287 domain-containing protein;gene=yiijF;Parent=GCA000010485_04052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3738,COG:S,KEGG:K09974,RefSeq:WP_000647862.1,SO:0001217,UniParc:UPI00005EF98E,UniRef:UniRef100_A0A061KXV2,UniRef:UniRef50_Q32AD1,UniRef:UniRef90_Q32AD1
contig_1	Pyrodigal	gene	4129056	4130159	.	-	.	ID=GCA000010485_04053_gene;locus_tag=GCA000010485_04053;gene=gldA
contig_1	Pyrodigal	CDS	4129056	4130159	.	-	0	ID=GCA000010485_04053;Name=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;locus_tag=GCA000010485_04053;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;Dbxref=GO:0005829,GO:0008270,GO:0008888,GO:0019147,GO:0019588,GO:0032991,GO:0042802,GO:0051289,GO:0051596;gene=gldA;Parent=GCA000010485_04053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000374004,COG:C,COG:COG0371,RefSeq:WP_000374004.1,SO:0001217,UniParc:UPI000012B56C,UniRef:UniRef100_P0A9S5,UniRef:UniRef50_P0A9S5,UniRef:UniRef90_P0A9S5;ec_number=1.1.1.75
contig_1	Pyrodigal	gene	4130170	4130832	.	-	.	ID=GCA000010485_04054_gene;locus_tag=GCA000010485_04054;gene=fsa
contig_1	Pyrodigal	CDS	4130170	4130832	.	-	0	ID=GCA000010485_04054;Name=fructose-6-phosphate aldolase;locus_tag=GCA000010485_04054;product=fructose-6-phosphate aldolase;Dbxref=GO:0005737,GO:0005975,GO:0006000,GO:0016832,GO:0042182,GO:0097023;gene=fsa;Parent=GCA000010485_04054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,KEGG:K08314,RefSeq:WP_000424857.1,SO:0001217,UniParc:UPI00005EF98F,UniRef:UniRef100_A0A066T9L0,UniRef:UniRef50_P78055,UniRef:UniRef90_P32669;ec_number=4.1.2.-
contig_1	Pyrodigal	gene	4130844	4133345	.	-	.	ID=GCA000010485_04055_gene;locus_tag=GCA000010485_04055;gene=ptsA
contig_1	Pyrodigal	CDS	4130844	4133345	.	-	0	ID=GCA000010485_04055;Name=Multiphosphoryl transfer protein 2;locus_tag=GCA000010485_04055;product=Multiphosphoryl transfer protein 2;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872,GO:1902495,GO:1990539;gene=ptsA;Parent=GCA000010485_04055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,KEGG:K23991,RefSeq:WP_001185130.1,SO:0001217,UniParc:UPI0001C22F2D,UniRef:UniRef100_A0A066T9U8,UniRef:UniRef50_P32670,UniRef:UniRef90_P32670;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	4133654	4134733	.	+	.	ID=GCA000010485_04056_gene;locus_tag=GCA000010485_04056;gene=frwC
contig_1	Pyrodigal	CDS	4133654	4134733	.	+	0	ID=GCA000010485_04056;Name=PTS fructose transporter subunit EIIC;locus_tag=GCA000010485_04056;product=PTS fructose transporter subunit EIIC;Dbxref=GO:0005351,GO:0005886,GO:0008982,GO:0009401,GO:0016020,GO:0090563,GO:1902495,GO:1990539;gene=frwC;Parent=GCA000010485_04056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,RefSeq:WP_001004469.1,SO:0001217,UniParc:UPI00000DF343,UniRef:UniRef100_E2QIY0,UniRef:UniRef50_P32672,UniRef:UniRef90_P32672
contig_1	Pyrodigal	gene	4134748	4135068	.	+	.	ID=GCA000010485_04057_gene;locus_tag=GCA000010485_04057;gene=frwB
contig_1	Pyrodigal	CDS	4134748	4135068	.	+	0	ID=GCA000010485_04057;Name=PTS fructose-like transporter subunit IIB;locus_tag=GCA000010485_04057;product=PTS fructose-like transporter subunit IIB;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0022877,GO:0090582;gene=frwB;Parent=GCA000010485_04057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1445,COG:G,RefSeq:WP_000161265.1,SO:0001217,UniParc:UPI00001329DB,UniRef:UniRef100_P69816,UniRef:UniRef50_P69816,UniRef:UniRef90_P69816;ec_number=2.7.1.202
contig_1	Pyrodigal	gene	4135119	4137416	.	+	.	ID=GCA000010485_04058_gene;locus_tag=GCA000010485_04058;gene=pflD
contig_1	Pyrodigal	CDS	4135119	4137416	.	+	0	ID=GCA000010485_04058;Name=formate C-acetyltransferase;locus_tag=GCA000010485_04058;product=formate C-acetyltransferase;Dbxref=GO:0003824,GO:0005829,GO:0016829;gene=pflD;Parent=GCA000010485_04058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,RefSeq:WP_000184861.1,SO:0001217,UniParc:UPI0001C22F2E,UniRef:UniRef100_A0A066T5F0,UniRef:UniRef50_P32674,UniRef:UniRef90_P32674;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	4137382	4138260	.	+	.	ID=GCA000010485_04059_gene;locus_tag=GCA000010485_04059;gene=pflC
contig_1	Pyrodigal	CDS	4137382	4138260	.	+	0	ID=GCA000010485_04059;Name=[formate-C-acetyltransferase]-activating enzyme;locus_tag=GCA000010485_04059;product=[formate-C-acetyltransferase]-activating enzyme;Dbxref=GO:0005737,GO:0006006,GO:0016491,GO:0043365,GO:0046872,GO:0051536,GO:0051539;gene=pflC;Parent=GCA000010485_04059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_000204099.1,SO:0001217,UniParc:UPI0001C22F2F,UniRef:UniRef100_A0A061YIV8,UniRef:UniRef50_P32675,UniRef:UniRef90_P32675;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	4138262	4138603	.	+	.	ID=GCA000010485_04060_gene;locus_tag=GCA000010485_04060;gene=frwB
contig_1	Pyrodigal	CDS	4138262	4138603	.	+	0	ID=GCA000010485_04060;Name=PTS fructose-like transporter subunit IIB;locus_tag=GCA000010485_04060;product=PTS fructose-like transporter subunit IIB;gene=frwB;Parent=GCA000010485_04060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1445,COG:G,RefSeq:WP_000323849.1,SO:0001217,UniParc:UPI000000E843,UniRef:UniRef100_E2QIY4,UniRef:UniRef50_A0A3P6L603,UniRef:UniRef90_A0A3P6L603;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	4138590	4139441	.	-	.	ID=GCA000010485_04061_gene;locus_tag=GCA000010485_04061;gene=yijO
contig_1	Pyrodigal	CDS	4138590	4139441	.	-	0	ID=GCA000010485_04061;Name=putative HTH-type transcriptional regulator YijO;locus_tag=GCA000010485_04061;product=putative HTH-type transcriptional regulator YijO;Dbxref=GO:0003700,GO:0043565;gene=yijO;Parent=GCA000010485_04061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000274617.1,SO:0001217,UniParc:UPI00000DF347,UniRef:UniRef100_A0A061LFF1,UniRef:UniRef50_P32677,UniRef:UniRef90_P32677
contig_1	Pyrodigal	gene	4139667	4141400	.	-	.	ID=GCA000010485_04062_gene;locus_tag=GCA000010485_04062;gene=ibeC
contig_1	Pyrodigal	CDS	4139667	4141400	.	-	0	ID=GCA000010485_04062;Name=phosphoethanolamine transferase CptA;locus_tag=GCA000010485_04062;product=phosphoethanolamine transferase CptA;Dbxref=GO:0005886,GO:0009244,GO:0016776;gene=ibeC;Parent=GCA000010485_04062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,RefSeq:WP_000556298.1,SO:0001217,UniParc:UPI000016E382,UniRef:UniRef100_P0CB40,UniRef:UniRef50_P0CB39,UniRef:UniRef90_P0CB39,VFDB:VFC0083,VFDB:VFG034721;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	4141583	4144234	.	-	.	ID=GCA000010485_04063_gene;locus_tag=GCA000010485_04063;gene=ppc
contig_1	Pyrodigal	CDS	4141583	4144234	.	-	0	ID=GCA000010485_04063;Name=phosphoenolpyruvate carboxylase;locus_tag=GCA000010485_04063;product=phosphoenolpyruvate carboxylase;Dbxref=GO:0000287,GO:0005829,GO:0006099,GO:0006107,GO:0008964,GO:0015977;gene=ppc;Parent=GCA000010485_04063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2352,KEGG:K01595,RefSeq:WP_001005578.1,SO:0001217,UniParc:UPI00016A24A6,UniRef:UniRef100_B7NU44,UniRef:UniRef50_P00864,UniRef:UniRef90_P00864;ec_number=4.1.1.31
contig_1	Pyrodigal	gene	4144536	4145687	.	-	.	ID=GCA000010485_04064_gene;locus_tag=GCA000010485_04064;gene=argE
contig_1	Pyrodigal	CDS	4144536	4145687	.	-	0	ID=GCA000010485_04064;Name=acetylornithine deacetylase;locus_tag=GCA000010485_04064;product=acetylornithine deacetylase;Dbxref=GO:0005737,GO:0006526,GO:0008270,GO:0008777,GO:0019213;gene=argE;Parent=GCA000010485_04064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_001296627.1,SO:0001217,UniParc:UPI0001C22F30,UniRef:UniRef100_A0A061YIW5,UniRef:UniRef50_P23908,UniRef:UniRef90_P23908;ec_number=3.5.1.16
contig_1	Pyrodigal	gene	4145841	4146845	.	+	.	ID=GCA000010485_04065_gene;locus_tag=GCA000010485_04065;gene=argC
contig_1	Pyrodigal	CDS	4145841	4146845	.	+	0	ID=GCA000010485_04065;Name=N-acetyl-gamma-glutamyl-phosphate reductase;locus_tag=GCA000010485_04065;product=N-acetyl-gamma-glutamyl-phosphate reductase;Dbxref=GO:0003942,GO:0005737,GO:0006526,GO:0006592,GO:0051287,GO:0070401;gene=argC;Parent=GCA000010485_04065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0002,COG:E,RefSeq:WP_000935352.1,SO:0001217,UniParc:UPI0001C22F31,UniRef:UniRef100_A0A066T9V8,UniRef:UniRef50_P11446,UniRef:UniRef90_P11446;ec_number=1.2.1.38
contig_1	Pyrodigal	gene	4146853	4147629	.	+	.	ID=GCA000010485_04066_gene;locus_tag=GCA000010485_04066;gene=argB
contig_1	Pyrodigal	CDS	4146853	4147629	.	+	0	ID=GCA000010485_04066;Name=acetylglutamate kinase;locus_tag=GCA000010485_04066;product=acetylglutamate kinase;Dbxref=GO:0003991,GO:0005524,GO:0005737,GO:0006526,GO:0042450;gene=argB;Parent=GCA000010485_04066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001575262,COG:COG0548,COG:E,RefSeq:WP_001296628.1,SO:0001217,UniParc:UPI0001C22F32,UniRef:UniRef100_A0A1Y5CC37,UniRef:UniRef50_P0A6C8,UniRef:UniRef90_P0A6C8;ec_number=2.7.2.8
contig_1	Pyrodigal	gene	4147690	4149063	.	+	.	ID=GCA000010485_04067_gene;locus_tag=GCA000010485_04067;gene=argH
contig_1	Pyrodigal	CDS	4147690	4149063	.	+	0	ID=GCA000010485_04067;Name=argininosuccinate lyase;locus_tag=GCA000010485_04067;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0042450;gene=argH;Parent=GCA000010485_04067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_001230098.1,SO:0001217,UniParc:UPI0001C22F33,UniRef:UniRef100_A0A061KXW5,UniRef:UniRef50_Q9K3D7,UniRef:UniRef90_Q8ZKL6;ec_number=4.3.2.1
contig_1	Infernal	gene	4149125	4149234	.	-	.	ID=GCA000010485_04068_gene;locus_tag=GCA000010485_04068;gene=oxyS
contig_1	Infernal	ncRNA	4149125	4149234	1.2e-24	-	.	ID=GCA000010485_04068;Name=OxyS RNA;locus_tag=GCA000010485_04068;gene=oxyS;product=OxyS RNA;Dbxref=RFAM:RF00035;Parent=GCA000010485_04068_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00035
contig_1	Pyrodigal	gene	4149330	4150247	.	+	.	ID=GCA000010485_04069_gene;locus_tag=GCA000010485_04069;gene=oxyR
contig_1	Pyrodigal	CDS	4149330	4150247	.	+	0	ID=GCA000010485_04069;Name=DNA-binding transcriptional regulator OxyR;locus_tag=GCA000010485_04069;product=DNA-binding transcriptional regulator OxyR;Dbxref=GO:0000987,GO:0003700,GO:0005829,GO:0006355,GO:0006974,GO:0006979,GO:0032993,GO:0051409,GO:2000142;gene=oxyR;Parent=GCA000010485_04069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001025939.1,SO:0001217,UniParc:UPI0000130F79,UniRef:UniRef100_P0ACQ4,UniRef:UniRef50_P0ACQ4,UniRef:UniRef90_P0ACQ4
contig_1	Pyrodigal	gene	4150230	4151630	.	-	.	ID=GCA000010485_04070_gene;locus_tag=GCA000010485_04070;gene=sthA
contig_1	Pyrodigal	CDS	4150230	4151630	.	-	0	ID=GCA000010485_04070;Name=Si-specific NAD(P)(+) transhydrogenase;locus_tag=GCA000010485_04070;product=Si-specific NAD(P)(+) transhydrogenase;Dbxref=GO:0003957,GO:0004148,GO:0005829,GO:0006090,GO:0006103,GO:0006739,GO:0045454,GO:0050660;gene=sthA;Parent=GCA000010485_04070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00322,RefSeq:WP_001120810.1,SO:0001217,UniParc:UPI00005EF2BD,UniRef:UniRef100_P27306,UniRef:UniRef50_P27306,UniRef:UniRef90_P27306;ec_number=1.6.1.1
contig_1	Pyrodigal	gene	4151960	4153126	.	+	.	ID=GCA000010485_04071_gene;locus_tag=GCA000010485_04071
contig_1	Pyrodigal	CDS	4151960	4153126	.	+	0	ID=GCA000010485_04071;Name=Amidohydrolase;locus_tag=GCA000010485_04071;product=Amidohydrolase;Parent=GCA000010485_04071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01451,RefSeq:WP_000569573.1,SO:0001217,UniParc:UPI0001C22F34,UniRef:UniRef100_A0A061YKQ3,UniRef:UniRef50_D8J190,UniRef:UniRef90_A0A370V5U9;ec_number=3.5.1.32
contig_1	Pyrodigal	gene	4153169	4154485	.	+	.	ID=GCA000010485_04072_gene;locus_tag=GCA000010485_04072
contig_1	Pyrodigal	CDS	4153169	4154485	.	+	0	ID=GCA000010485_04072;Name=MFS transporter;locus_tag=GCA000010485_04072;product=MFS transporter;Parent=GCA000010485_04072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000125467.1,SO:0001217,UniParc:UPI0001C22F35,UniRef:UniRef100_A0A061YCM1,UniRef:UniRef50_A0A0D8VTQ7,UniRef:UniRef90_A0A0D8VTQ7
contig_1	Pyrodigal	gene	4154535	4155239	.	+	.	ID=GCA000010485_04073_gene;locus_tag=GCA000010485_04073;gene=fabR
contig_1	Pyrodigal	CDS	4154535	4155239	.	+	0	ID=GCA000010485_04073;Name=HTH-type transcriptional repressor FabR;locus_tag=GCA000010485_04073;product=HTH-type transcriptional repressor FabR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006633,GO:0045717;gene=fabR;Parent=GCA000010485_04073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000470429.1,SO:0001217,UniParc:UPI00000D0AD7,UniRef:UniRef100_P0ACU5,UniRef:UniRef50_P0ACU5,UniRef:UniRef90_P0ACU5
contig_1	Pyrodigal	gene	4155239	4155598	.	+	.	ID=GCA000010485_04074_gene;locus_tag=GCA000010485_04074;gene=yijD
contig_1	Pyrodigal	CDS	4155239	4155598	.	+	0	ID=GCA000010485_04074;Name=YijD family membrane protein;locus_tag=GCA000010485_04074;product=YijD family membrane protein;Dbxref=GO:0005886;gene=yijD;Parent=GCA000010485_04074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000806409.1,SO:0001217,UniParc:UPI0001C22F36,UniRef:UniRef100_A0A066T5G5,UniRef:UniRef50_P0AF40,UniRef:UniRef90_P0AF40
contig_1	Pyrodigal	gene	4155638	4156738	.	-	.	ID=GCA000010485_04075_gene;locus_tag=GCA000010485_04075;gene=trmA
contig_1	Pyrodigal	CDS	4155638	4156738	.	-	0	ID=GCA000010485_04075;Name=tRNA (uridine(54)-C5)-methyltransferase TrmA;locus_tag=GCA000010485_04075;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;Dbxref=GO:0000049,GO:0005829,GO:0006396,GO:0019843,GO:0030488,GO:0030697;gene=trmA;Parent=GCA000010485_04075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K00557,RefSeq:WP_000186998.1,SO:0001217,UniParc:UPI0001C22F37,UniRef:UniRef100_A0A066T9M4,UniRef:UniRef50_P23003,UniRef:UniRef90_Q8X723;ec_number=2.1.1.35
contig_1	Infernal	regulatory_region	4156852	4157041	1.1e-14	+	.	ID=EFPPCJGBKI_304;Name=Cobalamin riboswitch aptamer;product=Cobalamin riboswitch aptamer;Dbxref=RFAM:RF00174;inference=profile:Rfam:RF00174;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	4157107	4158951	.	+	.	ID=GCA000010485_04076_gene;locus_tag=GCA000010485_04076;gene=btuB
contig_1	Pyrodigal	CDS	4157107	4158951	.	+	0	ID=GCA000010485_04076;Name=TonB-dependent vitamin B12 receptor BtuB;locus_tag=GCA000010485_04076;product=TonB-dependent vitamin B12 receptor BtuB;Dbxref=GO:0005509,GO:0009279,GO:0015288,GO:0015420,GO:0015889,GO:0016020,GO:0019904,GO:0034220,GO:0046930,GO:1902495;gene=btuB;Parent=GCA000010485_04076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4206,COG:H,RefSeq:WP_001296629.1,SO:0001217,UniParc:UPI0001C22F63,UniRef:UniRef100_A0A061L1P9,UniRef:UniRef50_P06129,UniRef:UniRef90_P06129
contig_1	Pyrodigal	gene	4158896	4159753	.	+	.	ID=GCA000010485_04077_gene;locus_tag=GCA000010485_04077;gene=murI
contig_1	Pyrodigal	CDS	4158896	4159753	.	+	0	ID=GCA000010485_04077;Name=glutamate racemase;locus_tag=GCA000010485_04077;product=glutamate racemase;Dbxref=GO:0008152,GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=murI;Parent=GCA000010485_04077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_001312258.1,SO:0001217,UniParc:UPI0001610B48,UniRef:UniRef100_A0A1U9TWY5,UniRef:UniRef50_P22634,UniRef:UniRef90_P22634;ec_number=5.1.1.3
contig_1	Infernal	gene	4160123	4161664	.	+	.	ID=GCA000010485_04078_gene;locus_tag=GCA000010485_04078;gene=rrs
contig_1	Infernal	rRNA	4160123	4161664	6.7e-48	+	.	ID=GCA000010485_04078;Name=16S ribosomal RNA;locus_tag=GCA000010485_04078;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_04078_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	4161733	4161809	.	+	.	ID=GCA000010485_04079_gene;locus_tag=GCA000010485_04079;gene=trnI
contig_1	tRNAscan-SE	tRNA	4161733	4161809	.	+	.	ID=GCA000010485_04079;Name=tRNA-Ile(gat);locus_tag=GCA000010485_04079;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000010485_04079_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	4161852	4161927	.	+	.	ID=GCA000010485_04080_gene;locus_tag=GCA000010485_04080;gene=trnA
contig_1	tRNAscan-SE	tRNA	4161852	4161927	.	+	.	ID=GCA000010485_04080;Name=tRNA-Ala(tgc);locus_tag=GCA000010485_04080;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000010485_04080_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Infernal	gene	4161994	4162102	.	+	.	ID=GCA000010485_04081_gene;locus_tag=GCA000010485_04081;gene=StyR-44
contig_1	Infernal	ncRNA	4161994	4162102	9.2e-22	+	.	ID=GCA000010485_04081;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_04081;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_04081_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	Infernal	gene	4162110	4165013	.	+	.	ID=GCA000010485_04082_gene;locus_tag=GCA000010485_04082;gene=rrl
contig_1	Infernal	rRNA	4162110	4165013	5.4e-06	+	.	ID=GCA000010485_04082;Name=23S ribosomal RNA;locus_tag=GCA000010485_04082;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_04082_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	4165116	4165231	.	+	.	ID=GCA000010485_04083_gene;locus_tag=GCA000010485_04083;gene=rrf
contig_1	Infernal	rRNA	4165116	4165231	2.4e-15	+	.	ID=GCA000010485_04083;Name=5S ribosomal RNA;locus_tag=GCA000010485_04083;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_04083_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	4165367	4166395	.	+	.	ID=GCA000010485_04084_gene;locus_tag=GCA000010485_04084;gene=murB
contig_1	Pyrodigal	CDS	4165367	4166395	.	+	0	ID=GCA000010485_04084;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000010485_04084;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000010485_04084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_001016670.1,SO:0001217,UniParc:UPI0001C22F64,UniRef:UniRef100_A0A7I0KVN9,UniRef:UniRef50_P08373,UniRef:UniRef90_P08373;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	4166392	4167357	.	+	.	ID=GCA000010485_04085_gene;locus_tag=GCA000010485_04085;gene=birA
contig_1	Pyrodigal	CDS	4166392	4167357	.	+	0	ID=GCA000010485_04085;Name=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;locus_tag=GCA000010485_04085;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;Dbxref=GO:0000976,GO:0003676,GO:0003677,GO:0004077,GO:0005524,GO:0005737,GO:0006355,GO:0006768,GO:0009102,GO:0009374,GO:0017053,GO:0036211,GO:0042803;gene=birA;Parent=GCA000010485_04085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1654,COG:K,KEGG:K03524,RefSeq:WP_000654592.1,SO:0001217,UniParc:UPI0001C22F65,UniRef:UniRef100_A0A061L058,UniRef:UniRef50_P06709,UniRef:UniRef90_P06709;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	4167386	4168312	.	-	.	ID=GCA000010485_04086_gene;locus_tag=GCA000010485_04086;gene=coaA
contig_1	Pyrodigal	CDS	4167386	4168312	.	-	0	ID=GCA000010485_04086;Name=type I pantothenate kinase;locus_tag=GCA000010485_04086;product=type I pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005737,GO:0015937;gene=coaA;Parent=GCA000010485_04086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1072,COG:H,KEGG:K00867,RefSeq:WP_000189379.1,SO:0001217,UniParc:UPI00001659C3,UniRef:UniRef100_P0A6I3,UniRef:UniRef50_P0A6I3,UniRef:UniRef90_P0A6I3;ec_number=2.7.1.33
contig_1	tRNAscan-SE	gene	4168698	4168773	.	+	.	ID=GCA000010485_04087_gene;locus_tag=GCA000010485_04087;gene=trnT
contig_1	tRNAscan-SE	tRNA	4168698	4168773	.	+	.	ID=GCA000010485_04087;Name=tRNA-Thr(tgt);locus_tag=GCA000010485_04087;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000010485_04087_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	4168782	4168866	.	+	.	ID=GCA000010485_04088_gene;locus_tag=GCA000010485_04088;gene=trnY
contig_1	tRNAscan-SE	tRNA	4168782	4168866	.	+	.	ID=GCA000010485_04088;Name=tRNA-Tyr(gta);locus_tag=GCA000010485_04088;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000010485_04088_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	4168983	4169057	.	+	.	ID=GCA000010485_04089_gene;locus_tag=GCA000010485_04089;gene=trnG
contig_1	tRNAscan-SE	tRNA	4168983	4169057	.	+	.	ID=GCA000010485_04089;Name=tRNA-Gly(tcc);locus_tag=GCA000010485_04089;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000010485_04089_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	4169064	4169139	.	+	.	ID=GCA000010485_04090_gene;locus_tag=GCA000010485_04090;gene=trnT
contig_1	tRNAscan-SE	tRNA	4169064	4169139	.	+	.	ID=GCA000010485_04090;Name=tRNA-Thr(ggt);locus_tag=GCA000010485_04090;product=tRNA-Thr(ggt);gene=trnT;anti_codon=ggt;amino_acid=Thr;Parent=GCA000010485_04090_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Pyrodigal	gene	4169254	4170438	.	+	.	ID=GCA000010485_04091_gene;locus_tag=GCA000010485_04091;gene=tuf
contig_1	Pyrodigal	CDS	4169254	4170438	.	+	0	ID=GCA000010485_04091;Name=elongation factor Tu;locus_tag=GCA000010485_04091;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0006414,GO:0046677,GO:0097216;gene=tuf;Parent=GCA000010485_04091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_000031784.1,SO:0001217,UniParc:UPI0000110FB2,UniRef:UniRef100_P0CE48,UniRef:UniRef50_P0CE48,UniRef:UniRef90_P0CE48
contig_1	Pyrodigal	gene	4170668	4171051	.	+	.	ID=GCA000010485_04092_gene;locus_tag=GCA000010485_04092;gene=secE
contig_1	Pyrodigal	CDS	4170668	4171051	.	+	0	ID=GCA000010485_04092;Name=preprotein translocase subunit SecE;locus_tag=GCA000010485_04092;product=preprotein translocase subunit SecE;Dbxref=GO:0005886,GO:0006616,GO:0006886,GO:0008320,GO:0009306,GO:0016020,GO:0031522,GO:0032978,GO:0043952,GO:0065002;gene=secE;Parent=GCA000010485_04092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_001275702.1,SO:0001217,UniParc:UPI0000061477,UniRef:UniRef100_P0AG96,UniRef:UniRef50_P0AG96,UniRef:UniRef90_P0AG96
contig_1	Pyrodigal	gene	4171053	4171598	.	+	.	ID=GCA000010485_04093_gene;locus_tag=GCA000010485_04093;gene=nusG
contig_1	Pyrodigal	CDS	4171053	4171598	.	+	0	ID=GCA000010485_04093;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000010485_04093;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0006353,GO:0008023,GO:0031564,GO:0032784,GO:0042254,GO:0140673;gene=nusG;Parent=GCA000010485_04093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,KEGG:K02601,RefSeq:WP_001287521.1,SO:0001217,UniParc:UPI000005A5E4,UniRef:UniRef100_P0AA02,UniRef:UniRef50_P0AFG0,UniRef:UniRef90_P0AFG0
contig_1	Pyrodigal	gene	4171757	4172185	.	+	.	ID=GCA000010485_04094_gene;locus_tag=GCA000010485_04094;gene=rplK
contig_1	Pyrodigal	CDS	4171757	4172185	.	+	0	ID=GCA000010485_04094;Name=50S ribosomal protein L11;locus_tag=GCA000010485_04094;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000010485_04094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_001085926.1,SO:0001217,UniParc:UPI000005A5E3,UniRef:UniRef100_P0A7J7,UniRef:UniRef50_P0A7J7,UniRef:UniRef90_P0A7J7
contig_1	Pyrodigal	gene	4172189	4172893	.	+	.	ID=GCA000010485_04095_gene;locus_tag=GCA000010485_04095;gene=rplA
contig_1	Pyrodigal	CDS	4172189	4172893	.	+	0	ID=GCA000010485_04095;Name=50S ribosomal protein L1;locus_tag=GCA000010485_04095;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843,GO:0022625;gene=rplA;Parent=GCA000010485_04095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_001096687.1,SO:0001217,UniParc:UPI0001C22F66,UniRef:UniRef100_A0A061YFJ4,UniRef:UniRef50_P0A7L0,UniRef:UniRef90_P0A7L0
contig_1	Pyrodigal	gene	4173185	4173682	.	+	.	ID=GCA000010485_04096_gene;locus_tag=GCA000010485_04096;gene=rplJ
contig_1	Pyrodigal	CDS	4173185	4173682	.	+	0	ID=GCA000010485_04096;Name=50S ribosomal protein L10;locus_tag=GCA000010485_04096;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0070180;gene=rplJ;Parent=GCA000010485_04096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_001207201.1,SO:0001217,UniParc:UPI0000047C5C,UniRef:UniRef100_P0A7J3,UniRef:UniRef50_P0A7J3,UniRef:UniRef90_P0A7J3
contig_1	Pyrodigal	gene	4173749	4174114	.	+	.	ID=GCA000010485_04097_gene;locus_tag=GCA000010485_04097;gene=rplL
contig_1	Pyrodigal	CDS	4173749	4174114	.	+	0	ID=GCA000010485_04097;Name=50S ribosomal protein L7/L12;locus_tag=GCA000010485_04097;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA000010485_04097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_000028878.1,SO:0001217,UniParc:UPI0000047C5D,UniRef:UniRef100_P0A7K2,UniRef:UniRef50_P0A7K2,UniRef:UniRef90_P0A7K2
contig_1	Infernal	gene	4174119	4174180	.	+	.	ID=GCA000010485_04098_gene;locus_tag=GCA000010485_04098;gene=P26
contig_1	Infernal	ncRNA	4174119	4174180	8.8e-15	+	.	ID=GCA000010485_04098;Name=Pseudomonas sRNA P26;locus_tag=GCA000010485_04098;product=Pseudomonas sRNA P26;Dbxref=RFAM:RF00630;Parent=GCA000010485_04098_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00630
contig_1	Pyrodigal	gene	4174434	4178462	.	+	.	ID=GCA000010485_04099_gene;locus_tag=GCA000010485_04099;gene=rpoB
contig_1	Pyrodigal	CDS	4174434	4178462	.	+	0	ID=GCA000010485_04099;Name=DNA-directed RNA polymerase subunit beta RpoB;locus_tag=GCA000010485_04099;product=DNA-directed RNA polymerase subunit beta RpoB;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA000010485_04099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_000263098.1,SO:0001217,UniParc:UPI000011F6D8,UniRef:UniRef100_P0A8V2,UniRef:UniRef50_P0A8V2,UniRef:UniRef90_P0A8V2;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	4178539	4182762	.	+	.	ID=GCA000010485_04100_gene;locus_tag=GCA000010485_04100;gene=rpoC
contig_1	Pyrodigal	CDS	4178539	4182762	.	+	0	ID=GCA000010485_04100;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000010485_04100;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000010485_04100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,RefSeq:WP_000653952.1,SO:0001217,UniParc:UPI0000D50CF5,UniRef:UniRef100_A1AIG0,UniRef:UniRef50_P0A8T7,UniRef:UniRef90_P0A8T7;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	4183004	4184137	.	-	.	ID=GCA000010485_04101_gene;locus_tag=GCA000010485_04101;gene=thiH
contig_1	Pyrodigal	CDS	4183004	4184137	.	-	0	ID=GCA000010485_04101;Name=2-iminoacetate synthase ThiH;locus_tag=GCA000010485_04101;product=2-iminoacetate synthase ThiH;Dbxref=GO:0005506,GO:0009228,GO:0016829,GO:0051539,GO:1904047;gene=thiH;Parent=GCA000010485_04101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03150,RefSeq:WP_000847423.1,SO:0001217,UniParc:UPI0001C22F67,UniRef:UniRef100_A0A061YFJ9,UniRef:UniRef50_Q9S498,UniRef:UniRef90_A0A7D7PHJ3;ec_number=4.1.99.19
contig_1	Pyrodigal	gene	4184134	4184904	.	-	.	ID=GCA000010485_04102_gene;locus_tag=GCA000010485_04102;gene=thiG
contig_1	Pyrodigal	CDS	4184134	4184904	.	-	0	ID=GCA000010485_04102;Name=thiazole synthase;locus_tag=GCA000010485_04102;product=thiazole synthase;gene=thiG;Parent=GCA000010485_04102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000944065,BlastRules:WP_000944073,KEGG:K03149,RefSeq:WP_000902347.1,SO:0001217,UniParc:UPI0001C22F68,UniRef:UniRef100_A0A066T859,UniRef:UniRef50_P30139,UniRef:UniRef90_A0A1Q6BDY4;ec_number=2.8.1.10
contig_1	Pyrodigal	gene	4184906	4185106	.	-	.	ID=GCA000010485_04103_gene;locus_tag=GCA000010485_04103;gene=thiS
contig_1	Pyrodigal	CDS	4184906	4185106	.	-	0	ID=GCA000010485_04103;Name=sulfur carrier protein ThiS;locus_tag=GCA000010485_04103;product=sulfur carrier protein ThiS;Dbxref=GO:0003824,GO:0009228;gene=thiS;Parent=GCA000010485_04103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001166245.1,SO:0001217,UniParc:UPI0001C22F69,UniRef:UniRef100_A0A061KF92,UniRef:UniRef50_Q6DAM3,UniRef:UniRef90_A0A178R7I7
contig_1	Pyrodigal	gene	4185090	4185845	.	-	.	ID=GCA000010485_04104_gene;locus_tag=GCA000010485_04104;gene=thiF
contig_1	Pyrodigal	CDS	4185090	4185845	.	-	0	ID=GCA000010485_04104;Name=thiazole biosynthesis adenylyltransferase ThiF;locus_tag=GCA000010485_04104;product=thiazole biosynthesis adenylyltransferase ThiF;Dbxref=GO:0009228,GO:0016779;gene=thiF;Parent=GCA000010485_04104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_001296715.1,SO:0001217,UniParc:UPI0001C22F6A,UniRef:UniRef100_A0A061KCZ3,UniRef:UniRef50_P30138,UniRef:UniRef90_A0A2B7LEP2;ec_number=2.7.7.73
contig_1	Pyrodigal	gene	4185838	4186473	.	-	.	ID=GCA000010485_04105_gene;locus_tag=GCA000010485_04105;gene=thiE
contig_1	Pyrodigal	CDS	4185838	4186473	.	-	0	ID=GCA000010485_04105;Name=thiamine phosphate synthase;locus_tag=GCA000010485_04105;product=thiamine phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000010485_04105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000284653.1,SO:0001217,UniParc:UPI0001C22F6B,UniRef:UniRef100_A0A061KCG6,UniRef:UniRef50_P30137,UniRef:UniRef90_P30137;ec_number=2.5.1.3
contig_1	Pyrodigal	gene	4186473	4188368	.	-	.	ID=GCA000010485_04106_gene;locus_tag=GCA000010485_04106;gene=thiC
contig_1	Pyrodigal	CDS	4186473	4188368	.	-	0	ID=GCA000010485_04106;Name=phosphomethylpyrimidine synthase ThiC;locus_tag=GCA000010485_04106;product=phosphomethylpyrimidine synthase ThiC;Dbxref=GO:0005829,GO:0008270,GO:0009228,GO:0009229,GO:0016830,GO:0051536,GO:0051539;gene=thiC;Parent=GCA000010485_04106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0422,COG:H,KEGG:K03147,RefSeq:WP_001276886.1,SO:0001217,UniParc:UPI0001C22F6C,UniRef:UniRef100_A0A066T410,UniRef:UniRef50_Q9L9I7,UniRef:UniRef90_P30136;ec_number=4.1.99.17
contig_1	Infernal	regulatory_region	4188449	4188549	3.2e-12	-	.	ID=EFPPCJGBKI_316;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	4188601	4189077	.	-	.	ID=GCA000010485_04107_gene;locus_tag=GCA000010485_04107;gene=rsd
contig_1	Pyrodigal	CDS	4188601	4189077	.	-	0	ID=GCA000010485_04107;Name=sigma D regulator;locus_tag=GCA000010485_04107;product=sigma D regulator;Dbxref=GO:0005737,GO:0006355;gene=rsd;Parent=GCA000010485_04107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3160,COG:K,RefSeq:WP_000934300.1,SO:0001217,UniParc:UPI00005EFD07,UniRef:UniRef100_B7MIY1,UniRef:UniRef50_P0AFX4,UniRef:UniRef90_P0AFX4
contig_1	Pyrodigal	gene	4189172	4189945	.	+	.	ID=GCA000010485_04108_gene;locus_tag=GCA000010485_04108;gene=nudC
contig_1	Pyrodigal	CDS	4189172	4189945	.	+	0	ID=GCA000010485_04108;Name=NAD(+) diphosphatase;locus_tag=GCA000010485_04108;product=NAD(+) diphosphatase;Dbxref=GO:0000210,GO:0000287,GO:0005829,GO:0006734,GO:0006742,GO:0008270,GO:0016787,GO:0019677,GO:0030145,GO:0035529,GO:0110153;gene=nudC;Parent=GCA000010485_04108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2816,COG:F,KEGG:K03426,RefSeq:WP_000373941.1,SO:0001217,UniParc:UPI00016A24E0,UniRef:UniRef100_B7NRS9,UniRef:UniRef50_P32664,UniRef:UniRef90_P32664;ec_number=3.6.1.22
contig_1	Pyrodigal	gene	4189985	4191049	.	+	.	ID=GCA000010485_04109_gene;locus_tag=GCA000010485_04109;gene=hemE
contig_1	Pyrodigal	CDS	4189985	4191049	.	+	0	ID=GCA000010485_04109;Name=uroporphyrinogen decarboxylase;locus_tag=GCA000010485_04109;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0005829,GO:0006779,GO:0019353;gene=hemE;Parent=GCA000010485_04109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0407,COG:H,KEGG:K01599,RefSeq:WP_000137653.1,SO:0001217,UniParc:UPI00000DF35D,UniRef:UniRef100_B7UPF2,UniRef:UniRef50_P29680,UniRef:UniRef90_P29680;ec_number=4.1.1.37
contig_1	Pyrodigal	gene	4191059	4191730	.	+	.	ID=GCA000010485_04110_gene;locus_tag=GCA000010485_04110;gene=nfi
contig_1	Pyrodigal	CDS	4191059	4191730	.	+	0	ID=GCA000010485_04110;Name=deoxyribonuclease V;locus_tag=GCA000010485_04110;product=deoxyribonuclease V;Dbxref=GO:0000287,GO:0003727,GO:0004519,GO:0005737,GO:0006281,GO:0016891,GO:0043737;gene=nfi;Parent=GCA000010485_04110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1515,COG:L,KEGG:K05982,RefSeq:WP_000362389.1,SO:0001217,UniParc:UPI0001C22F6D,UniRef:UniRef100_A0A061YDS6,UniRef:UniRef50_P68739,UniRef:UniRef90_P68739;ec_number=3.1.21.7
contig_1	Pyrodigal	gene	4191773	4192363	.	+	.	ID=GCA000010485_04111_gene;locus_tag=GCA000010485_04111;gene=yjaG
contig_1	Pyrodigal	CDS	4191773	4192363	.	+	0	ID=GCA000010485_04111;Name=putative protein YjaG;locus_tag=GCA000010485_04111;product=putative protein YjaG;Dbxref=GO:0005829;gene=yjaG;Parent=GCA000010485_04111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3068,COG:S,KEGG:K09891,RefSeq:WP_000940085.1,SO:0001217,UniParc:UPI0001C22F6E,UniRef:UniRef100_A0A066T414,UniRef:UniRef50_P32680,UniRef:UniRef90_P32680
contig_1	Pyrodigal	gene	4192550	4192822	.	+	.	ID=GCA000010485_04112_gene;locus_tag=GCA000010485_04112;gene=hupA
contig_1	Pyrodigal	CDS	4192550	4192822	.	+	0	ID=GCA000010485_04112;Name=nucleoid-associated protein HU-alpha;locus_tag=GCA000010485_04112;product=nucleoid-associated protein HU-alpha;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hupA;Parent=GCA000010485_04112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_001044513.1,SO:0001217,UniParc:UPI000003ACCA,UniRef:UniRef100_P0ACF0,UniRef:UniRef50_P0ACF0,UniRef:UniRef90_P0ACF0
contig_1	Pyrodigal	gene	4192895	4193530	.	+	.	ID=GCA000010485_04113_gene;locus_tag=GCA000010485_04113
contig_1	Pyrodigal	CDS	4192895	4193530	.	+	0	ID=GCA000010485_04113;Name=DUF1481 domain-containing protein;locus_tag=GCA000010485_04113;product=DUF1481 domain-containing protein;Parent=GCA000010485_04113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E8BBFC,UniRef:UniRef100_A0AA36PBS2,UniRef:UniRef50_P32681,UniRef:UniRef90_A0AA36PBS2
contig_1	Pyrodigal	gene	4193532	4193951	.	-	.	ID=GCA000010485_04114_gene;locus_tag=GCA000010485_04114;gene=zraP
contig_1	Pyrodigal	CDS	4193532	4193951	.	-	0	ID=GCA000010485_04114;Name=zinc resistance sensor/chaperone ZraP;locus_tag=GCA000010485_04114;product=zinc resistance sensor/chaperone ZraP;Dbxref=GO:0042597;gene=zraP;Parent=GCA000010485_04114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3678,COG:O,RefSeq:WP_001296714.1,SO:0001217,UniParc:UPI00005AB377,UniRef:UniRef100_Q8CVI9,UniRef:UniRef50_P0AAA9,UniRef:UniRef90_P0AAA9
contig_1	Pyrodigal	gene	4194189	4195565	.	+	.	ID=GCA000010485_04115_gene;locus_tag=GCA000010485_04115;gene=zraS
contig_1	Pyrodigal	CDS	4194189	4195565	.	+	0	ID=GCA000010485_04115;Name=two-component system sensor histidine kinase ZraS;locus_tag=GCA000010485_04115;product=two-component system sensor histidine kinase ZraS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016310;gene=zraS;Parent=GCA000010485_04115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001211906.1,SO:0001217,UniParc:UPI0001C22F71,UniRef:UniRef100_A0A061KCF3,UniRef:UniRef50_P14377,UniRef:UniRef90_Q8X614;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	4195562	4196887	.	+	.	ID=GCA000010485_04116_gene;locus_tag=GCA000010485_04116;gene=zraR
contig_1	Pyrodigal	CDS	4195562	4196887	.	+	0	ID=GCA000010485_04116;Name=sigma-54-dependent response regulator transcription factor ZraR;locus_tag=GCA000010485_04116;product=sigma-54-dependent response regulator transcription factor ZraR;Dbxref=GO:0000156,GO:0000160,GO:0003677,GO:0005524,GO:0005737,GO:0006355,GO:0016887,GO:0043565;gene=zraR;Parent=GCA000010485_04116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2204,COG:T,RefSeq:WP_000148498.1,SO:0001217,UniParc:UPI0001C22F72,UniRef:UniRef100_A0A061YFL4,UniRef:UniRef50_P14375,UniRef:UniRef90_P14375
contig_1	Pyrodigal	gene	4196884	4198173	.	-	.	ID=GCA000010485_04117_gene;locus_tag=GCA000010485_04117;gene=purD
contig_1	Pyrodigal	CDS	4196884	4198173	.	-	0	ID=GCA000010485_04117;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000010485_04117;product=Phosphoribosylamine--glycine ligase;Dbxref=GO:0004637,GO:0005524,GO:0006164,GO:0006189,GO:0006974,GO:0009113,GO:0016887,GO:0046872;gene=purD;Parent=GCA000010485_04117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0151,COG:F,RefSeq:WP_000866835.1,SO:0001217,UniParc:UPI0001C22F73,UniRef:UniRef100_A0A066T8G4,UniRef:UniRef50_P15640,UniRef:UniRef90_P15640;ec_number=6.3.4.13
contig_1	Pyrodigal	gene	4198185	4199774	.	-	.	ID=GCA000010485_04118_gene;locus_tag=GCA000010485_04118;gene=purH
contig_1	Pyrodigal	CDS	4198185	4199774	.	-	0	ID=GCA000010485_04118;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000010485_04118;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003937,GO:0004643,GO:0005829,GO:0006189,GO:0009152;gene=purH;Parent=GCA000010485_04118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0138,COG:F,KEGG:K00602,RefSeq:WP_001187526.1,SO:0001217,UniParc:UPI0001C22F74,UniRef:UniRef100_A0A061KF77,UniRef:UniRef50_P15639,UniRef:UniRef90_P15639;ec_number=3.5.4.10
contig_1	Infernal	gene	4200389	4201930	.	+	.	ID=GCA000010485_04119_gene;locus_tag=GCA000010485_04119;gene=rrs
contig_1	Infernal	rRNA	4200389	4201930	6e-48	+	.	ID=GCA000010485_04119;Name=16S ribosomal RNA;locus_tag=GCA000010485_04119;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000010485_04119_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	4202016	4202091	.	+	.	ID=GCA000010485_04120_gene;locus_tag=GCA000010485_04120;gene=trnE
contig_1	tRNAscan-SE	tRNA	4202016	4202091	.	+	.	ID=GCA000010485_04120;Name=tRNA-Glu(ttc);locus_tag=GCA000010485_04120;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000010485_04120_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	4202169	4202277	.	+	.	ID=GCA000010485_04121_gene;locus_tag=GCA000010485_04121;gene=StyR-44
contig_1	Infernal	ncRNA	4202169	4202277	2.3e-21	+	.	ID=GCA000010485_04121;Name=Salmonella enterica Typhi npcRNA 44;locus_tag=GCA000010485_04121;product=Salmonella enterica Typhi npcRNA 44;Dbxref=RFAM:RF01830;Parent=GCA000010485_04121_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01830
contig_1	Infernal	gene	4202285	4205188	.	+	.	ID=GCA000010485_04122_gene;locus_tag=GCA000010485_04122;gene=rrl
contig_1	Infernal	rRNA	4202285	4205188	5.4e-06	+	.	ID=GCA000010485_04122;Name=23S ribosomal RNA;locus_tag=GCA000010485_04122;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000010485_04122_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	4205291	4205406	.	+	.	ID=GCA000010485_04123_gene;locus_tag=GCA000010485_04123;gene=rrf
contig_1	Infernal	rRNA	4205291	4205406	2e-15	+	.	ID=GCA000010485_04123;Name=5S ribosomal RNA;locus_tag=GCA000010485_04123;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000010485_04123_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	4205483	4205866	.	+	.	ID=GCA000010485_04124_gene;locus_tag=GCA000010485_04124;gene=yjaA
contig_1	Pyrodigal	CDS	4205483	4205866	.	+	0	ID=GCA000010485_04124;Name=putative protein YjaA;locus_tag=GCA000010485_04124;product=putative protein YjaA;Dbxref=GO:0044011,GO:0070301,GO:0071468;gene=yjaA;Parent=GCA000010485_04124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001350411.1,SO:0001217,UniParc:UPI0001C22F75,UniRef:UniRef100_A0A061KYI5,UniRef:UniRef50_P09162,UniRef:UniRef90_P09162
contig_1	Pyrodigal	gene	4205930	4206373	.	-	.	ID=GCA000010485_04125_gene;locus_tag=GCA000010485_04125
contig_1	Pyrodigal	CDS	4205930	4206373	.	-	0	ID=GCA000010485_04125;Name=acetyltransferase;locus_tag=GCA000010485_04125;product=acetyltransferase;Dbxref=GO:0008080;Parent=GCA000010485_04125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000236963.1,SO:0001217,UniParc:UPI0001C22F76,UniRef:UniRef100_A0A061YI47,UniRef:UniRef50_A0A2S5UHB6,UniRef:UniRef90_A0A061YI47
contig_1	Pyrodigal	gene	4206530	4207459	.	+	.	ID=GCA000010485_04126_gene;locus_tag=GCA000010485_04126;gene=metA
contig_1	Pyrodigal	CDS	4206530	4207459	.	+	0	ID=GCA000010485_04126;Name=homoserine O-succinyltransferase;locus_tag=GCA000010485_04126;product=homoserine O-succinyltransferase;Dbxref=GO:0004414,GO:0005737,GO:0008899,GO:0019281;gene=metA;Parent=GCA000010485_04126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1897,COG:E,RefSeq:WP_001122786.1,SO:0001217,UniParc:UPI0000165548,UniRef:UniRef100_Q8X610,UniRef:UniRef50_P07623,UniRef:UniRef90_P07623;ec_number=2.3.1.46
contig_1	Pyrodigal	gene	4207728	4209329	.	+	.	ID=GCA000010485_04127_gene;locus_tag=GCA000010485_04127;gene=aceB
contig_1	Pyrodigal	CDS	4207728	4209329	.	+	0	ID=GCA000010485_04127;Name=malate synthase A;locus_tag=GCA000010485_04127;product=malate synthase A;Dbxref=GO:0004474,GO:0005737,GO:0006097,GO:0006099;gene=aceB;Parent=GCA000010485_04127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01638,RefSeq:WP_000138849.1,SO:0001217,UniParc:UPI0001C22FA7,UniRef:UniRef100_A0A061L2B2,UniRef:UniRef50_Q9LZC3,UniRef:UniRef90_P08997;ec_number=2.3.3.9
contig_1	Pyrodigal	gene	4209359	4210663	.	+	.	ID=GCA000010485_04128_gene;locus_tag=GCA000010485_04128;gene=aceA
contig_1	Pyrodigal	CDS	4209359	4210663	.	+	0	ID=GCA000010485_04128;Name=isocitrate lyase;locus_tag=GCA000010485_04128;product=isocitrate lyase;Dbxref=GO:0004451,GO:0005829,GO:0006097,GO:0006099,GO:0019752,GO:0043169,GO:0046872;gene=aceA;Parent=GCA000010485_04128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2224,KEGG:K01637,RefSeq:WP_000857856.1,SO:0001217,UniParc:UPI0000052071,UniRef:UniRef100_P0A9G6,UniRef:UniRef50_P0A9G6,UniRef:UniRef90_P0A9G6;ec_number=4.1.3.1
contig_1	Infernal	gene	4210689	4210760	.	+	.	ID=GCA000010485_04129_gene;locus_tag=GCA000010485_04129;gene=naRNA4
contig_1	Infernal	ncRNA	4210689	4210760	3.2e-09	+	.	ID=GCA000010485_04129;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04129;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04129_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4210788	4212512	.	+	.	ID=GCA000010485_04130_gene;locus_tag=GCA000010485_04130;gene=aceK
contig_1	Pyrodigal	CDS	4210788	4212512	.	+	0	ID=GCA000010485_04130;Name=bifunctional isocitrate dehydrogenase kinase/phosphatase;locus_tag=GCA000010485_04130;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;Dbxref=GO:0004674,GO:0004721,GO:0005524,GO:0005737,GO:0006006,GO:0006097,GO:0006099,GO:0008772,GO:0016208,GO:0016791;gene=aceK;Parent=GCA000010485_04130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4579,COG:T,KEGG:K00906,RefSeq:WP_001137231.1,SO:0001217,UniParc:UPI0001C22FA8,UniRef:UniRef100_A0A061KYJ1,UniRef:UniRef50_P51067,UniRef:UniRef90_P51067;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	4212529	4213353	.	-	.	ID=GCA000010485_04131_gene;locus_tag=GCA000010485_04131;gene=iclR
contig_1	Pyrodigal	CDS	4212529	4213353	.	-	0	ID=GCA000010485_04131;Name=glyoxylate bypass operon transcriptional repressor IclR;locus_tag=GCA000010485_04131;product=glyoxylate bypass operon transcriptional repressor IclR;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006097,GO:0006355,GO:0045892;gene=iclR;Parent=GCA000010485_04131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1414,COG:K,RefSeq:WP_000226409.1,SO:0001217,UniParc:UPI00016088DA,UniRef:UniRef100_E2QJ39,UniRef:UniRef50_P16528,UniRef:UniRef90_P16528
contig_1	Pyrodigal	gene	4213554	4217237	.	+	.	ID=GCA000010485_04132_gene;locus_tag=GCA000010485_04132;gene=metH
contig_1	Pyrodigal	CDS	4213554	4217237	.	+	0	ID=GCA000010485_04132;Name=methionine synthase;locus_tag=GCA000010485_04132;product=methionine synthase;Dbxref=GO:0008270,GO:0008705,GO:0009086,GO:0031419;gene=metH;Parent=GCA000010485_04132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1410,COG:E,RefSeq:WP_000095941.1,SO:0001217,UniParc:UPI0001C22FA9,UniRef:UniRef100_A0A061L316,UniRef:UniRef50_P13009,UniRef:UniRef90_A0A2G9BRZ7;ec_number=2.1.1.13
contig_1	Pyrodigal	gene	4217658	4218107	.	+	.	ID=GCA000010485_04133_gene;locus_tag=GCA000010485_04133;gene=gtrA
contig_1	Pyrodigal	CDS	4217658	4218107	.	+	0	ID=GCA000010485_04133;Name=GtrA family protein;locus_tag=GCA000010485_04133;product=GtrA family protein;gene=gtrA;Parent=GCA000010485_04133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001189565.1,SO:0001217,UniParc:UPI0000DAD115,UniRef:UniRef100_A0A067HJE0,UniRef:UniRef50_B7LKV6,UniRef:UniRef90_A0A0H2VFM1
contig_1	Pyrodigal	gene	4218278	4219909	.	+	.	ID=GCA000010485_04134_gene;locus_tag=GCA000010485_04134;gene=yjbB
contig_1	Pyrodigal	CDS	4218278	4219909	.	+	0	ID=GCA000010485_04134;Name=putative protein YjbB;locus_tag=GCA000010485_04134;product=putative protein YjbB;Dbxref=GO:0005436,GO:0005886,GO:0044341;gene=yjbB;Parent=GCA000010485_04134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1283,COG:P,RefSeq:WP_000956822.1,SO:0001217,UniParc:UPI00000DF36F,UniRef:UniRef100_E2QJ43,UniRef:UniRef50_P0AF43,UniRef:UniRef90_P0AF43
contig_1	Pyrodigal	gene	4219999	4220688	.	-	.	ID=GCA000010485_04135_gene;locus_tag=GCA000010485_04135;gene=pepE
contig_1	Pyrodigal	CDS	4219999	4220688	.	-	0	ID=GCA000010485_04135;Name=dipeptidase PepE;locus_tag=GCA000010485_04135;product=dipeptidase PepE;Dbxref=GO:0005737,GO:0006508,GO:0008236,GO:0016805;gene=pepE;Parent=GCA000010485_04135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000421758.1,SO:0001217,UniParc:UPI0001C22FAA,UniRef:UniRef100_A0A066T2M0,UniRef:UniRef50_P36936,UniRef:UniRef90_P0A7C6;ec_number=3.4.13.21
contig_1	Pyrodigal	gene	4221070	4222299	.	-	.	ID=GCA000010485_04136_gene;locus_tag=GCA000010485_04136;gene=sorE
contig_1	Pyrodigal	CDS	4221070	4222299	.	-	0	ID=GCA000010485_04136;Name=L-sorbose 1-phosphate reductase;locus_tag=GCA000010485_04136;product=L-sorbose 1-phosphate reductase;gene=sorE;Parent=GCA000010485_04136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002884587,COG:COG1063,COG:ER,KEGG:K19956,RefSeq:WP_000858558.1,SO:0001217,UniParc:UPI0000D50E3C,UniRef:UniRef100_A0A066SY94,UniRef:UniRef50_A0A0E1NB82,UniRef:UniRef90_A0A0A1ACE9;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	4222351	4223175	.	-	.	ID=GCA000010485_04137_gene;locus_tag=GCA000010485_04137;gene=sorM
contig_1	Pyrodigal	CDS	4222351	4223175	.	-	0	ID=GCA000010485_04137;Name=PTS system sorbose-specific EIID component;locus_tag=GCA000010485_04137;product=PTS system sorbose-specific EIID component;Dbxref=GO:0005886,GO:0009401;gene=sorM;Parent=GCA000010485_04137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3716,COG:G,KEGG:K02815,RefSeq:WP_000437896.1,SO:0001217,UniParc:UPI0000043972,UniRef:UniRef100_A0A229CCG4,UniRef:UniRef50_P69805,UniRef:UniRef90_P37083
contig_1	Pyrodigal	gene	4223186	4223983	.	-	.	ID=GCA000010485_04138_gene;locus_tag=GCA000010485_04138;gene=sorA
contig_1	Pyrodigal	CDS	4223186	4223983	.	-	0	ID=GCA000010485_04138;Name=PTS system sorbose-specific EIIC component;locus_tag=GCA000010485_04138;product=PTS system sorbose-specific EIIC component;Dbxref=GO:0005886,GO:0009401;gene=sorA;Parent=GCA000010485_04138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3715,COG:G,KEGG:K02814,RefSeq:WP_000406332.1,SO:0001217,UniParc:UPI0000043973,UniRef:UniRef100_E2QJ47,UniRef:UniRef50_Q9RGG3,UniRef:UniRef90_P37082
contig_1	Pyrodigal	gene	4224049	4224543	.	-	.	ID=GCA000010485_04139_gene;locus_tag=GCA000010485_04139;gene=agaB
contig_1	Pyrodigal	CDS	4224049	4224543	.	-	0	ID=GCA000010485_04139;Name=PTS friuctose transporter subunit IIB;locus_tag=GCA000010485_04139;product=PTS friuctose transporter subunit IIB;gene=agaB;Parent=GCA000010485_04139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3444,COG:G,KEGG:K02813,RefSeq:WP_001027851.1,SO:0001217,UniParc:UPI0001C22FAB,UniRef:UniRef100_A0A7I0KVM8,UniRef:UniRef50_P37081,UniRef:UniRef90_A0A066T2S3;ec_number=2.7.1.206
contig_1	Pyrodigal	gene	4224543	4224950	.	-	.	ID=GCA000010485_04140_gene;locus_tag=GCA000010485_04140;gene=manX
contig_1	Pyrodigal	CDS	4224543	4224950	.	-	0	ID=GCA000010485_04140;Name=PTS system mannose/fructose/sorbose family IIA;locus_tag=GCA000010485_04140;product=PTS system mannose/fructose/sorbose family IIA;gene=manX;Parent=GCA000010485_04140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2893,COG:G,KEGG:K02812,RefSeq:WP_000245656.1,SO:0001217,UniParc:UPI0001C22FAC,UniRef:UniRef100_A0A641BJR8,UniRef:UniRef50_P37080,UniRef:UniRef90_A0A2Y4XE88;ec_number=2.7.1.206
contig_1	Pyrodigal	gene	4224960	4225766	.	-	.	ID=GCA000010485_04141_gene;locus_tag=GCA000010485_04141;gene=fabG
contig_1	Pyrodigal	CDS	4224960	4225766	.	-	0	ID=GCA000010485_04141;Name=SDR family NAD(P)-dependent oxidoreductase;locus_tag=GCA000010485_04141;product=SDR family NAD(P)-dependent oxidoreductase;gene=fabG;Parent=GCA000010485_04141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_001195410.1,SO:0001217,UniParc:UPI000187C105,UniRef:UniRef100_A0A061L0E7,UniRef:UniRef50_P37079,UniRef:UniRef90_A0A066Q6U8
contig_1	Pyrodigal	gene	4225836	4226783	.	-	.	ID=GCA000010485_04142_gene;locus_tag=GCA000010485_04142;gene=deoR
contig_1	Pyrodigal	CDS	4225836	4226783	.	-	0	ID=GCA000010485_04142;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_04142;product=Helix-turn-helix domain-containing protein;gene=deoR;Parent=GCA000010485_04142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,RefSeq:WP_000431664.1,SO:0001217,UniParc:UPI0001C22FAD,UniRef:UniRef100_A0A061L326,UniRef:UniRef50_P37078,UniRef:UniRef90_A0A069F8X4
contig_1	Pyrodigal	gene	4227131	4228003	.	+	.	ID=GCA000010485_04143_gene;locus_tag=GCA000010485_04143;gene=rluF
contig_1	Pyrodigal	CDS	4227131	4228003	.	+	0	ID=GCA000010485_04143;Name=23S rRNA pseudouridine(2604) synthase RluF;locus_tag=GCA000010485_04143;product=23S rRNA pseudouridine(2604) synthase RluF;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0008033,GO:0009982,GO:0160138;gene=rluF;Parent=GCA000010485_04143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_000936388.1,SO:0001217,UniParc:UPI0001C22FAE,UniRef:UniRef100_A0A066SUN4,UniRef:UniRef50_P32684,UniRef:UniRef90_P32684;ec_number=5.4.99.21
contig_1	Pyrodigal	gene	4228004	4228276	.	-	.	ID=GCA000010485_04144_gene;locus_tag=GCA000010485_04144
contig_1	Pyrodigal	CDS	4228004	4228276	.	-	0	ID=GCA000010485_04144;Name=DUF3811 domain-containing protein;locus_tag=GCA000010485_04144;product=DUF3811 domain-containing protein;Parent=GCA000010485_04144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001207638.1,SO:0001217,UniParc:UPI00000D0C32,UniRef:UniRef100_C3SHW2,UniRef:UniRef50_P32685,UniRef:UniRef90_A0AAC8QSA9
contig_1	Pyrodigal	gene	4228528	4229877	.	-	.	ID=GCA000010485_04145_gene;locus_tag=GCA000010485_04145;gene=lysC
contig_1	Pyrodigal	CDS	4228528	4229877	.	-	0	ID=GCA000010485_04145;Name=lysine-sensitive aspartokinase 3;locus_tag=GCA000010485_04145;product=lysine-sensitive aspartokinase 3;Dbxref=GO:0004072,GO:0005524,GO:0005829,GO:0009089,GO:0009090,GO:0042803;gene=lysC;Parent=GCA000010485_04145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_001290321.1,SO:0001217,UniParc:UPI00000DF374,UniRef:UniRef100_E2QJ54,UniRef:UniRef50_P08660,UniRef:UniRef90_P08660;ec_number=2.7.2.4
contig_1	Infernal	regulatory_region	4229969	4230165	2e-14	-	.	ID=EFPPCJGBKI_307;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	4230402	4232051	.	+	.	ID=GCA000010485_04146_gene;locus_tag=GCA000010485_04146;gene=pgi
contig_1	Pyrodigal	CDS	4230402	4232051	.	+	0	ID=GCA000010485_04146;Name=glucose-6-phosphate isomerase;locus_tag=GCA000010485_04146;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000010485_04146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0166,COG:G,RefSeq:WP_000789981.1,SO:0001217,UniParc:UPI000019C550,UniRef:UniRef100_B7UPI6,UniRef:UniRef50_P0A6T1,UniRef:UniRef90_P0A6T1;ec_number=5.3.1.9
contig_1	Infernal	gene	4232068	4232138	.	+	.	ID=GCA000010485_04147_gene;locus_tag=GCA000010485_04147;gene=naRNA4
contig_1	Infernal	ncRNA	4232068	4232138	7.3e-12	+	.	ID=GCA000010485_04147;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04147;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04147_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4232204	4232353	.	-	.	ID=GCA000010485_04148_gene;locus_tag=GCA000010485_04148;gene=STnc430
contig_1	Infernal	ncRNA	4232204	4232353	1.9e-10	-	.	ID=GCA000010485_04148;Name=Enterobacterial sRNA STnc430;locus_tag=GCA000010485_04148;product=Enterobacterial sRNA STnc430;Dbxref=RFAM:RF02053;Parent=GCA000010485_04148_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02053
contig_1	Pyrodigal	gene	4232549	4232791	.	+	.	ID=GCA000010485_04149_gene;locus_tag=GCA000010485_04149;gene=yjbE
contig_1	Pyrodigal	CDS	4232549	4232791	.	+	0	ID=GCA000010485_04149;Name=putative protein YjbE;locus_tag=GCA000010485_04149;product=putative protein YjbE;Dbxref=GO:0044010,GO:0045226;gene=yjbE;Parent=GCA000010485_04149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000757333.1,SO:0001217,UniParc:UPI000013B521,UniRef:UniRef100_P0AF45,UniRef:UniRef50_P0AF45,UniRef:UniRef90_P0AF45
contig_1	Pyrodigal	gene	4232906	4233544	.	+	.	ID=GCA000010485_04150_gene;locus_tag=GCA000010485_04150;gene=yjbF
contig_1	Pyrodigal	CDS	4232906	4233544	.	+	0	ID=GCA000010485_04150;Name=putative lipoprotein YjbF;locus_tag=GCA000010485_04150;product=putative lipoprotein YjbF;Dbxref=GO:0005886,GO:0045226;gene=yjbF;Parent=GCA000010485_04150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296632.1,SO:0001217,UniParc:UPI00005F0008,UniRef:UniRef100_A0A023KW07,UniRef:UniRef50_P32687,UniRef:UniRef90_P32687
contig_1	Pyrodigal	gene	4233541	4234278	.	+	.	ID=GCA000010485_04151_gene;locus_tag=GCA000010485_04151;gene=yjbG
contig_1	Pyrodigal	CDS	4233541	4234278	.	+	0	ID=GCA000010485_04151;Name=putative protein YjbG;locus_tag=GCA000010485_04151;product=putative protein YjbG;Dbxref=GO:0045226;gene=yjbG;Parent=GCA000010485_04151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595518.1,SO:0001217,UniParc:UPI0001C22FAF,UniRef:UniRef100_A0A066T2R5,UniRef:UniRef50_P32688,UniRef:UniRef90_P32688
contig_1	Pyrodigal	gene	4234278	4236374	.	+	.	ID=GCA000010485_04152_gene;locus_tag=GCA000010485_04152;gene=yjbH
contig_1	Pyrodigal	CDS	4234278	4236374	.	+	0	ID=GCA000010485_04152;Name=YjbH domain-containing protein;locus_tag=GCA000010485_04152;product=YjbH domain-containing protein;gene=yjbH;Parent=GCA000010485_04152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000745756.1,SO:0001217,UniParc:UPI0001C22FB0,UniRef:UniRef100_A0A061YH03,UniRef:UniRef50_P32689,UniRef:UniRef90_Q8X4L8
contig_1	Pyrodigal	gene	4236914	4237324	.	+	.	ID=GCA000010485_04153_gene;locus_tag=GCA000010485_04153;gene=psiE
contig_1	Pyrodigal	CDS	4236914	4237324	.	+	0	ID=GCA000010485_04153;Name=phosphate-starvation-inducible protein PsiE;locus_tag=GCA000010485_04153;product=phosphate-starvation-inducible protein PsiE;Dbxref=GO:0005886,GO:0016036;gene=psiE;Parent=GCA000010485_04153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3223,COG:R,KEGG:K13256,RefSeq:WP_000202902.1,SO:0001217,UniParc:UPI00001327AB,UniRef:UniRef100_P0A7C8,UniRef:UniRef50_P0A7C8,UniRef:UniRef90_P0A7C8
contig_1	Pyrodigal	gene	4237418	4238308	.	-	.	ID=GCA000010485_04154_gene;locus_tag=GCA000010485_04154;gene=malG
contig_1	Pyrodigal	CDS	4237418	4238308	.	-	0	ID=GCA000010485_04154;Name=maltose ABC transporter permease MalG;locus_tag=GCA000010485_04154;product=maltose ABC transporter permease MalG;Dbxref=GO:0005886,GO:0015423,GO:0016020,GO:0042956,GO:0055085;gene=malG;Parent=GCA000010485_04154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3833,COG:G,KEGG:K10110,RefSeq:WP_001252058.1,SO:0001217,UniParc:UPI000012EB4D,UniRef:UniRef100_P68183,UniRef:UniRef50_P68183,UniRef:UniRef90_P68183;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	4238323	4239867	.	-	.	ID=GCA000010485_04155_gene;locus_tag=GCA000010485_04155;gene=malF
contig_1	Pyrodigal	CDS	4238323	4239867	.	-	0	ID=GCA000010485_04155;Name=maltose ABC transporter permease MalF;locus_tag=GCA000010485_04155;product=maltose ABC transporter permease MalF;Dbxref=GO:0015423,GO:0042956,GO:0043190,GO:0055085,GO:1990060;gene=malF;Parent=GCA000010485_04155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545706.1,SO:0001217,UniParc:UPI0001C22FB1,UniRef:UniRef100_A0A641BKN2,UniRef:UniRef50_P02916,UniRef:UniRef90_P02916;ec_number=7.5.2.1
contig_1	Infernal	gene	4239887	4239957	.	+	.	ID=GCA000010485_04156_gene;locus_tag=GCA000010485_04156;gene=naRNA4
contig_1	Infernal	ncRNA	4239887	4239957	8.3e-09	+	.	ID=GCA000010485_04156;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04156;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04156_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4240021	4241211	.	-	.	ID=GCA000010485_04157_gene;locus_tag=GCA000010485_04157;gene=malE
contig_1	Pyrodigal	CDS	4240021	4241211	.	-	0	ID=GCA000010485_04157;Name=maltose/maltodextrin ABC transporter substrate-binding protein MalE;locus_tag=GCA000010485_04157;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;Dbxref=GO:0006974,GO:0008643,GO:0015144,GO:0015768,GO:0016020,GO:0030288,GO:0034289,GO:0042597,GO:0042956,GO:0043190,GO:0055052,GO:0055085,GO:0060326,GO:1901982,GO:1990060;gene=malE;Parent=GCA000010485_04157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10108,RefSeq:WP_000695402.1,SO:0001217,UniParc:UPI0001C22FB2,UniRef:UniRef100_A0A3K3NEC0,UniRef:UniRef50_P0AEX9,UniRef:UniRef90_P0AEX9;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	4241576	4242691	.	+	.	ID=GCA000010485_04158_gene;locus_tag=GCA000010485_04158;gene=malK
contig_1	Pyrodigal	CDS	4241576	4242691	.	+	0	ID=GCA000010485_04158;Name=maltose/maltodextrin ABC transporter ATP-binding protein MalK;locus_tag=GCA000010485_04158;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;Dbxref=GO:0005524,GO:0008643,GO:0015423,GO:0016887,GO:0043190,GO:0055052,GO:0055085,GO:0140359,GO:1990060;gene=malK;Parent=GCA000010485_04158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3839,COG:G,RefSeq:WP_000179165.1,SO:0001217,UniParc:UPI000012EB53,UniRef:UniRef100_P68187,UniRef:UniRef50_P68187,UniRef:UniRef90_P68187;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	4242766	4244103	.	+	.	ID=GCA000010485_04159_gene;locus_tag=GCA000010485_04159;gene=lamB
contig_1	Pyrodigal	CDS	4242766	4244103	.	+	0	ID=GCA000010485_04159;Name=maltoporin LamB;locus_tag=GCA000010485_04159;product=maltoporin LamB;gene=lamB;Parent=GCA000010485_04159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000973663,KEGG:K02024,SO:0001217,UniRef:UniRef50_P02943,UniRef:UniRef90_UPI000B7F0D52
contig_1	Infernal	gene	4244116	4244186	.	+	.	ID=GCA000010485_04160_gene;locus_tag=GCA000010485_04160;gene=naRNA4
contig_1	Infernal	ncRNA	4244116	4244186	5.3e-11	+	.	ID=GCA000010485_04160;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04160;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04160_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4244335	4245255	.	+	.	ID=GCA000010485_04161_gene;locus_tag=GCA000010485_04161;gene=malM
contig_1	Pyrodigal	CDS	4244335	4245255	.	+	0	ID=GCA000010485_04161;Name=maltose operon protein MalM;locus_tag=GCA000010485_04161;product=maltose operon protein MalM;Dbxref=GO:0008643,GO:0042597;gene=malM;Parent=GCA000010485_04161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001385609.1,SO:0001217,UniParc:UPI0001C22FB3,UniRef:UniRef100_A0A3K0QI86,UniRef:UniRef50_P03841,UniRef:UniRef90_P03841
contig_1	Pyrodigal	gene	4245434	4245931	.	+	.	ID=GCA000010485_04162_gene;locus_tag=GCA000010485_04162;gene=ubiC
contig_1	Pyrodigal	CDS	4245434	4245931	.	+	0	ID=GCA000010485_04162;Name=chorismate lyase;locus_tag=GCA000010485_04162;product=chorismate lyase;Dbxref=GO:0005829,GO:0006744,GO:0008813,GO:0042866;gene=ubiC;Parent=GCA000010485_04162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3161,COG:H,RefSeq:WP_000019227.1,SO:0001217,UniParc:UPI00000DF37E,UniRef:UniRef100_B7UPK0,UniRef:UniRef50_P26602,UniRef:UniRef90_P26602;ec_number=4.1.3.40
contig_1	Pyrodigal	gene	4245944	4246816	.	+	.	ID=GCA000010485_04163_gene;locus_tag=GCA000010485_04163;gene=ubiA
contig_1	Pyrodigal	CDS	4245944	4246816	.	+	0	ID=GCA000010485_04163;Name=4-hydroxybenzoate octaprenyltransferase;locus_tag=GCA000010485_04163;product=4-hydroxybenzoate octaprenyltransferase;Dbxref=GO:0005886,GO:0006744,GO:0008412;gene=ubiA;Parent=GCA000010485_04163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0382,COG:H,RefSeq:WP_000455235.1,SO:0001217,UniParc:UPI0001C22FB4,UniRef:UniRef100_A0A066SUL8,UniRef:UniRef50_P0AGK1,UniRef:UniRef90_P0AGK1;ec_number=2.5.1.39
contig_1	Pyrodigal	gene	4246971	4249394	.	-	.	ID=GCA000010485_04164_gene;locus_tag=GCA000010485_04164;gene=plsB
contig_1	Pyrodigal	CDS	4246971	4249394	.	-	0	ID=GCA000010485_04164;Name=glycerol-3-phosphate 1-O-acyltransferase PlsB;locus_tag=GCA000010485_04164;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;Dbxref=GO:0004366,GO:0005886,GO:0006631,GO:0008654,GO:0016024;gene=plsB;Parent=GCA000010485_04164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2937,COG:I,KEGG:K00631,RefSeq:WP_000017354.1,SO:0001217,UniParc:UPI000016F3EF,UniRef:UniRef100_P0A7A7,UniRef:UniRef50_P0A7A7,UniRef:UniRef90_P0A7A7;ec_number=2.3.1.15
contig_1	Pyrodigal	gene	4249565	4249933	.	+	.	ID=GCA000010485_04165_gene;locus_tag=GCA000010485_04165;gene=dgkA
contig_1	Pyrodigal	CDS	4249565	4249933	.	+	0	ID=GCA000010485_04165;Name=diacylglycerol kinase;locus_tag=GCA000010485_04165;product=diacylglycerol kinase;Dbxref=GO:0004143,GO:0005524,GO:0005886,GO:0006654,GO:0046872;gene=dgkA;Parent=GCA000010485_04165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000002907,COG:COG0818,COG:I,RefSeq:WP_000002899.1,SO:0001217,UniParc:UPI00005EF7DB,UniRef:UniRef100_E2QJ71,UniRef:UniRef50_P0ABN1,UniRef:UniRef90_P0ABN1;ec_number=2.7.1.107
contig_1	Pyrodigal	gene	4250043	4250651	.	+	.	ID=GCA000010485_04166_gene;locus_tag=GCA000010485_04166;gene=lexA
contig_1	Pyrodigal	CDS	4250043	4250651	.	+	0	ID=GCA000010485_04166;Name=transcriptional repressor LexA;locus_tag=GCA000010485_04166;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0009432,GO:0045892;gene=lexA;Parent=GCA000010485_04166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_000646078.1,SO:0001217,UniParc:UPI0000042A94,UniRef:UniRef100_P0A7C2,UniRef:UniRef50_P0A7C2,UniRef:UniRef90_P0A7C2;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	4250724	4252049	.	+	.	ID=GCA000010485_04167_gene;locus_tag=GCA000010485_04167;gene=dinF
contig_1	Pyrodigal	CDS	4250724	4252049	.	+	0	ID=GCA000010485_04167;Name=MATE family efflux transporter DinF;locus_tag=GCA000010485_04167;product=MATE family efflux transporter DinF;Dbxref=GO:0005886,GO:0015297,GO:0016020,GO:0042910,GO:0055085;gene=dinF;Parent=GCA000010485_04167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0534,COG:V,RefSeq:WP_001296637.1,SO:0001217,UniParc:UPI00016088D9,UniRef:UniRef100_A0A1U9TWT9,UniRef:UniRef50_P28303,UniRef:UniRef90_P28303
contig_1	Pyrodigal	gene	4252165	4252374	.	+	.	ID=GCA000010485_04168_gene;locus_tag=GCA000010485_04168;gene=yjbJ
contig_1	Pyrodigal	CDS	4252165	4252374	.	+	0	ID=GCA000010485_04168;Name=UPF0337 protein YjbJ;locus_tag=GCA000010485_04168;product=UPF0337 protein YjbJ;Dbxref=GO:0005829,GO:0060187;gene=yjbJ;Parent=GCA000010485_04168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_001296638.1,SO:0001217,UniParc:UPI000044FB32,UniRef:UniRef100_Q8FB32,UniRef:UniRef50_P68206,UniRef:UniRef90_P68206
contig_1	Pyrodigal	gene	4252416	4252931	.	-	.	ID=GCA000010485_04169_gene;locus_tag=GCA000010485_04169;gene=zur
contig_1	Pyrodigal	CDS	4252416	4252931	.	-	0	ID=GCA000010485_04169;Name=zinc uptake transcriptional repressor Zur;locus_tag=GCA000010485_04169;product=zinc uptake transcriptional repressor Zur;Dbxref=GO:0003700,GO:0006355;gene=zur;Parent=GCA000010485_04169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09823,RefSeq:WP_000416264.1,SO:0001217,UniParc:UPI00005EF7DD,UniRef:UniRef100_A0A066T2P8,UniRef:UniRef50_A0A377WCX6,UniRef:UniRef90_A0A066T2P8
contig_1	Pyrodigal	gene	4253087	4254082	.	+	.	ID=GCA000010485_04170_gene;locus_tag=GCA000010485_04170;gene=dusA
contig_1	Pyrodigal	CDS	4253087	4254082	.	+	0	ID=GCA000010485_04170;Name=tRNA dihydrouridine(20/20a) synthase DusA;locus_tag=GCA000010485_04170;product=tRNA dihydrouridine(20/20a) synthase DusA;Dbxref=GO:0000049,GO:0002943,GO:0010181,GO:0017150,GO:0050660,GO:0102264,GO:0102266;gene=dusA;Parent=GCA000010485_04170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_001110630.1,SO:0001217,UniParc:UPI00000DF383,UniRef:UniRef100_Q8FB30,UniRef:UniRef50_P32695,UniRef:UniRef90_P32695;ec_number=1.3.1.91
contig_1	Pyrodigal	gene	4254216	4254458	.	+	.	ID=GCA000010485_04171_gene;locus_tag=GCA000010485_04171;gene=pspG
contig_1	Pyrodigal	CDS	4254216	4254458	.	+	0	ID=GCA000010485_04171;Name=envelope stress response protein PspG;locus_tag=GCA000010485_04171;product=envelope stress response protein PspG;Dbxref=GO:0005886,GO:0009271;gene=pspG;Parent=GCA000010485_04171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000891394.1,SO:0001217,UniParc:UPI0001C22ED2,UniRef:UniRef100_A0A061KXU0,UniRef:UniRef50_P32696,UniRef:UniRef90_P32696
contig_1	Pyrodigal	gene	4254623	4255606	.	-	.	ID=GCA000010485_04172_gene;locus_tag=GCA000010485_04172;gene=qorA
contig_1	Pyrodigal	CDS	4254623	4255606	.	-	0	ID=GCA000010485_04172;Name=Quinone oxidoreductase 1;locus_tag=GCA000010485_04172;product=Quinone oxidoreductase 1;Dbxref=GO:0003960,GO:0005829,GO:0008270,GO:0035925,GO:0042803,GO:0070402;gene=qorA;Parent=GCA000010485_04172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000235538.1,SO:0001217,UniParc:UPI0001C22ED3,UniRef:UniRef100_A0A066SU68,UniRef:UniRef50_P28304,UniRef:UniRef90_P28304;ec_number=1.6.5.5
contig_1	Pyrodigal	gene	4255712	4257748	.	-	.	ID=GCA000010485_04173_gene;locus_tag=GCA000010485_04173
contig_1	Pyrodigal	CDS	4255712	4257748	.	-	0	ID=GCA000010485_04173;Name=Oxidoreductase;locus_tag=GCA000010485_04173;product=Oxidoreductase;Parent=GCA000010485_04173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000564684.1,SO:0001217,UniParc:UPI0001C22ED4,UniRef:UniRef100_A0A066SUK9,UniRef:UniRef50_A0A2R8AEM9,UniRef:UniRef90_A0A0H2Z568
contig_1	Pyrodigal	gene	4257759	4259039	.	-	.	ID=GCA000010485_04174_gene;locus_tag=GCA000010485_04174
contig_1	Pyrodigal	CDS	4257759	4259039	.	-	0	ID=GCA000010485_04174;Name=Nramp family divalent metal transporter;locus_tag=GCA000010485_04174;product=Nramp family divalent metal transporter;Dbxref=GO:0016020,GO:0022857,GO:0055085;Parent=GCA000010485_04174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22ED5,UniRef:UniRef100_A0A135Y152,UniRef:UniRef50_A0A2X4XB76,UniRef:UniRef90_A0A7A7BBI1
contig_1	Pyrodigal	gene	4259066	4259845	.	-	.	ID=GCA000010485_04175_gene;locus_tag=GCA000010485_04175
contig_1	Pyrodigal	CDS	4259066	4259845	.	-	0	ID=GCA000010485_04175;Name=Enoyl-CoA hydratase/isomerase family protein;locus_tag=GCA000010485_04175;product=Enoyl-CoA hydratase/isomerase family protein;Parent=GCA000010485_04175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001059067.1,SO:0001217,UniParc:UPI0001C22ED6,UniRef:UniRef100_A0A066T2I0,UniRef:UniRef50_A0A2B7LJ76,UniRef:UniRef90_A0A2B7LJ76
contig_1	Pyrodigal	gene	4259838	4261409	.	-	.	ID=GCA000010485_04176_gene;locus_tag=GCA000010485_04176;gene=ydiF
contig_1	Pyrodigal	CDS	4259838	4261409	.	-	0	ID=GCA000010485_04176;Name=Acetate CoA-transferase YdiF;locus_tag=GCA000010485_04176;product=Acetate CoA-transferase YdiF;gene=ydiF;Parent=GCA000010485_04176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01026,RefSeq:WP_000337273.1,SO:0001217,UniParc:UPI0001C22ED7,UniRef:UniRef100_A0A066SY66,UniRef:UniRef50_A0A0Q8AC66,UniRef:UniRef90_A0A370V0X4;ec_number=2.8.3.1
contig_1	Pyrodigal	gene	4261665	4262699	.	+	.	ID=GCA000010485_04177_gene;locus_tag=GCA000010485_04177;gene=cytR
contig_1	Pyrodigal	CDS	4261665	4262699	.	+	0	ID=GCA000010485_04177;Name=HTH-type transcriptional repressor CytR;locus_tag=GCA000010485_04177;product=HTH-type transcriptional repressor CytR;gene=cytR;Parent=GCA000010485_04177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001129782.1,SO:0001217,UniParc:UPI0000E45231,UniRef:UniRef100_A0A061YFX7,UniRef:UniRef50_A0A2B7LJD4,UniRef:UniRef90_A0A2B7LJD4
contig_1	Pyrodigal	gene	4262772	4264187	.	+	.	ID=GCA000010485_04178_gene;locus_tag=GCA000010485_04178;gene=dnaB
contig_1	Pyrodigal	CDS	4262772	4264187	.	+	0	ID=GCA000010485_04178;Name=replicative DNA helicase;locus_tag=GCA000010485_04178;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0004386,GO:0005524,GO:0005829,GO:0006260,GO:0006268,GO:0006269,GO:0006270,GO:0009378,GO:0010212,GO:0016853,GO:0016887,GO:0030894,GO:0031297,GO:0032508,GO:0033202,GO:0036121,GO:0042802,GO:0043139,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990077,GO:1990100,GO:1990156,GO:1990158,GO:1990159,GO:1990160,GO:1990518;gene=dnaB;Parent=GCA000010485_04178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,KEGG:K02314,RefSeq:WP_001296639.1,SO:0001217,UniParc:UPI00005D3BF7,UniRef:UniRef100_Q8FB22,UniRef:UniRef50_P0ACB0,UniRef:UniRef90_P0ACB0;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	4264240	4265319	.	+	.	ID=GCA000010485_04179_gene;locus_tag=GCA000010485_04179;gene=alr
contig_1	Pyrodigal	CDS	4264240	4265319	.	+	0	ID=GCA000010485_04179;Name=alanine racemase;locus_tag=GCA000010485_04179;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000010485_04179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_001147314.1,SO:0001217,UniParc:UPI0001C22ED8,UniRef:UniRef100_A0A061YBR7,UniRef:UniRef50_P0A6B4,UniRef:UniRef90_P0A6B4;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	4265342	4265899	.	+	.	ID=GCA000010485_04180_gene;locus_tag=GCA000010485_04180;gene=pnuC
contig_1	Pyrodigal	CDS	4265342	4265899	.	+	0	ID=GCA000010485_04180;Name=nicotinamide riboside transporter PnuC;locus_tag=GCA000010485_04180;product=nicotinamide riboside transporter PnuC;Dbxref=GO:0015663,GO:0015890,GO:0016020;gene=pnuC;Parent=GCA000010485_04180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03811,RefSeq:WP_000122237.1,SO:0001217,UniParc:UPI0001C22ED9,UniRef:UniRef100_A0A061L2H3,UniRef:UniRef50_V3EYJ1,UniRef:UniRef90_A0A0D8VVZ6
contig_1	Pyrodigal	gene	4265896	4266900	.	+	.	ID=GCA000010485_04181_gene;locus_tag=GCA000010485_04181
contig_1	Pyrodigal	CDS	4265896	4266900	.	+	0	ID=GCA000010485_04181;Name=NadR/Ttd14 AAA domain-containing protein;locus_tag=GCA000010485_04181;product=NadR/Ttd14 AAA domain-containing protein;Parent=GCA000010485_04181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06211,RefSeq:WP_001523669.1,SO:0001217,UniParc:UPI0002A46537,UniRef:UniRef100_A0A066SY62,UniRef:UniRef50_A0A155UF42,UniRef:UniRef90_A0A454AAJ7;ec_number=2.7.7.1
contig_1	Pyrodigal	gene	4266982	4268175	.	+	.	ID=GCA000010485_04182_gene;locus_tag=GCA000010485_04182;gene=tyrB
contig_1	Pyrodigal	CDS	4266982	4268175	.	+	0	ID=GCA000010485_04182;Name=aromatic amino acid transaminase;locus_tag=GCA000010485_04182;product=aromatic amino acid transaminase;gene=tyrB;Parent=GCA000010485_04182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000486903,COG:COG1448,COG:E,RefSeq:WP_000486956.1,SO:0001217,UniParc:UPI0001C22EDB,UniRef:UniRef100_A0A061KYQ1,UniRef:UniRef50_O85746,UniRef:UniRef90_D2TRT3;ec_number=2.6.1.57
contig_1	Pyrodigal	gene	4268357	4271101	.	+	.	ID=GCA000010485_04183_gene;locus_tag=GCA000010485_04183
contig_1	Pyrodigal	CDS	4268357	4271101	.	+	0	ID=GCA000010485_04183;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000010485_04183;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0006099,GO:0030976;Parent=GCA000010485_04183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296640.1,SO:0001217,UniParc:UPI0001C22EDC,UniRef:UniRef100_A0A066SUK2,UniRef:UniRef50_A0A3P2A4S6,UniRef:UniRef90_A0A2G8ZV83;ec_number=1.2.4.2
contig_1	Pyrodigal	gene	4271134	4272288	.	+	.	ID=GCA000010485_04184_gene;locus_tag=GCA000010485_04184;gene=odhB
contig_1	Pyrodigal	CDS	4271134	4272288	.	+	0	ID=GCA000010485_04184;Name=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000010485_04184;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0006099,GO:0045252;gene=odhB;Parent=GCA000010485_04184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000570223.1,SO:0001217,UniParc:UPI0001C22EDD,UniRef:UniRef100_A0A066T2N4,UniRef:UniRef50_A0A5R9LIR5,UniRef:UniRef90_A0A233YTY4;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	4272300	4273718	.	+	.	ID=GCA000010485_04185_gene;locus_tag=GCA000010485_04185;gene=lpdA
contig_1	Pyrodigal	CDS	4272300	4273718	.	+	0	ID=GCA000010485_04185;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000010485_04185;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0050660;gene=lpdA;Parent=GCA000010485_04185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00382,RefSeq:WP_000103921.1,SO:0001217,UniParc:UPI0001C22EDE,UniRef:UniRef100_A0A066T2H1,UniRef:UniRef50_A0A0G9FLS7,UniRef:UniRef90_A0A0G9FLS7;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	4273740	4274909	.	+	.	ID=GCA000010485_04186_gene;locus_tag=GCA000010485_04186;gene=sucC
contig_1	Pyrodigal	CDS	4273740	4274909	.	+	0	ID=GCA000010485_04186;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000010485_04186;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0003824,GO:0005524,GO:0006099,GO:0046872;gene=sucC;Parent=GCA000010485_04186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001048626.1,SO:0001217,UniParc:UPI0001C22EDF,UniRef:UniRef100_A0A061KXY1,UniRef:UniRef50_Q2N695,UniRef:UniRef90_A0A0J2A673;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	4274922	4275794	.	+	.	ID=GCA000010485_04187_gene;locus_tag=GCA000010485_04187;gene=sucD
contig_1	Pyrodigal	CDS	4274922	4275794	.	+	0	ID=GCA000010485_04187;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000010485_04187;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0003824;gene=sucD;Parent=GCA000010485_04187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000114645.1,SO:0001217,UniParc:UPI0001C22EE0,UniRef:UniRef100_A0A066SU56,UniRef:UniRef50_A0A9D6QND4,UniRef:UniRef90_A0A0D8VZ23;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	4276006	4277505	.	+	.	ID=GCA000010485_04188_gene;locus_tag=GCA000010485_04188
contig_1	Pyrodigal	CDS	4276006	4277505	.	+	0	ID=GCA000010485_04188;Name=DASS family sodium-coupled anion symporter;locus_tag=GCA000010485_04188;product=DASS family sodium-coupled anion symporter;Parent=GCA000010485_04188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001304712.1,SO:0001217,UniParc:UPI0000043981,UniRef:UniRef100_A0A0D8VFH6,UniRef:UniRef50_Q07252,UniRef:UniRef90_A0A0D8VFH6
contig_1	Pyrodigal	gene	4277517	4278590	.	+	.	ID=GCA000010485_04189_gene;locus_tag=GCA000010485_04189
contig_1	Pyrodigal	CDS	4277517	4278590	.	+	0	ID=GCA000010485_04189;Name=Lactate dehydrogenase;locus_tag=GCA000010485_04189;product=Lactate dehydrogenase;Parent=GCA000010485_04189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545710.1,SO:0001217,UniParc:UPI0001C22EE1,UniRef:UniRef100_A0A7I0L5A3,UniRef:UniRef50_A8AN61,UniRef:UniRef90_E2QJT7
contig_1	Pyrodigal	gene	4278579	4279937	.	-	.	ID=GCA000010485_04190_gene;locus_tag=GCA000010485_04190
contig_1	Pyrodigal	CDS	4278579	4279937	.	-	0	ID=GCA000010485_04190;Name=Sigma-54-dependent Fis family transcriptional regulator;locus_tag=GCA000010485_04190;product=Sigma-54-dependent Fis family transcriptional regulator;Parent=GCA000010485_04190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060180.1,SO:0001217,UniParc:UPI0001C22EE2,UniRef:UniRef100_A0A066T2G7,UniRef:UniRef50_T0AVX8,UniRef:UniRef90_A0A0D8VW07
contig_1	Pyrodigal	gene	4279930	4281750	.	-	.	ID=GCA000010485_04191_gene;locus_tag=GCA000010485_04191
contig_1	Pyrodigal	CDS	4279930	4281750	.	-	0	ID=GCA000010485_04191;Name=histidine kinase;locus_tag=GCA000010485_04191;product=histidine kinase;Parent=GCA000010485_04191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704411.1,SO:0001217,UniParc:UPI0001C22EE3,UniRef:UniRef100_A0A7I0KVE7,UniRef:UniRef50_A8AN59,UniRef:UniRef90_A0A7Z7YJ69
contig_1	Pyrodigal	gene	4282027	4282740	.	+	.	ID=GCA000010485_04192_gene;locus_tag=GCA000010485_04192;gene=aphA
contig_1	Pyrodigal	CDS	4282027	4282740	.	+	0	ID=GCA000010485_04192;Name=acid phosphatase AphA;locus_tag=GCA000010485_04192;product=acid phosphatase AphA;Dbxref=GO:0003993,GO:0030288,GO:0046872;gene=aphA;Parent=GCA000010485_04192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001226933.1,SO:0001217,UniParc:UPI00000E4AAA,UniRef:UniRef100_A0A061YFZ0,UniRef:UniRef50_P0AE22,UniRef:UniRef90_P0AE22;ec_number=3.1.3.2
contig_1	Pyrodigal	gene	4282851	4283267	.	+	.	ID=GCA000010485_04193_gene;locus_tag=GCA000010485_04193;gene=yjbQ
contig_1	Pyrodigal	CDS	4282851	4283267	.	+	0	ID=GCA000010485_04193;Name=UPF0047 protein YjbQ;locus_tag=GCA000010485_04193;product=UPF0047 protein YjbQ;gene=yjbQ;Parent=GCA000010485_04193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0432,COG:H,RefSeq:WP_000270369.1,SO:0001217,UniParc:UPI00000DF394,UniRef:UniRef100_A0A061Y7W3,UniRef:UniRef50_P0AF48,UniRef:UniRef90_P0AF48
contig_1	Pyrodigal	gene	4283271	4283627	.	+	.	ID=GCA000010485_04194_gene;locus_tag=GCA000010485_04194;gene=yjbR
contig_1	Pyrodigal	CDS	4283271	4283627	.	+	0	ID=GCA000010485_04194;Name=putative protein YjbR;locus_tag=GCA000010485_04194;product=putative protein YjbR;gene=yjbR;Parent=GCA000010485_04194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2315,COG:K,RefSeq:WP_000155657.1,SO:0001217,UniParc:UPI000013B52B,UniRef:UniRef100_P0AF50,UniRef:UniRef50_P0AF50,UniRef:UniRef90_P0AF50
contig_1	Pyrodigal	gene	4283662	4286484	.	-	.	ID=GCA000010485_04195_gene;locus_tag=GCA000010485_04195;gene=uvrA
contig_1	Pyrodigal	CDS	4283662	4286484	.	-	0	ID=GCA000010485_04195;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000010485_04195;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0008270,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrA;Parent=GCA000010485_04195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_000357763.1,SO:0001217,UniParc:UPI0000137E7E,UniRef:UniRef100_B7UPM7,UniRef:UniRef50_P0A698,UniRef:UniRef90_P0A698;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	4286739	4287275	.	+	.	ID=GCA000010485_04196_gene;locus_tag=GCA000010485_04196;gene=ssb1
contig_1	Pyrodigal	CDS	4286739	4287275	.	+	0	ID=GCA000010485_04196;Name=single-stranded DNA-binding protein SSB1;locus_tag=GCA000010485_04196;product=single-stranded DNA-binding protein SSB1;Dbxref=GO:0003697,GO:0006260,GO:0006281,GO:0006310,GO:0009295;gene=ssb1;Parent=GCA000010485_04196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000168322,RefSeq:WP_000168305.1,SO:0001217,UniParc:UPI000016554D,UniRef:UniRef100_P0AGE0,UniRef:UniRef50_P0AGE0,UniRef:UniRef90_P0AGE0
contig_1	Pyrodigal	gene	4287374	4287655	.	-	.	ID=GCA000010485_04197_gene;locus_tag=GCA000010485_04197
contig_1	Pyrodigal	CDS	4287374	4287655	.	-	0	ID=GCA000010485_04197;Name=Membrane protein;locus_tag=GCA000010485_04197;product=Membrane protein;Parent=GCA000010485_04197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296643.1,SO:0001217,UniParc:UPI000188663D,UniRef:UniRef100_A0A061KYT6,UniRef:UniRef90_P32700
contig_1	Pyrodigal	gene	4288084	4289670	.	+	.	ID=GCA000010485_04198_gene;locus_tag=GCA000010485_04198;gene=pdeC
contig_1	Pyrodigal	CDS	4288084	4289670	.	+	0	ID=GCA000010485_04198;Name=c-di-GMP phosphodiesterase PdeC;locus_tag=GCA000010485_04198;product=c-di-GMP phosphodiesterase PdeC;Dbxref=GO:0005886,GO:0071111;gene=pdeC;Parent=GCA000010485_04198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000019548,KEGG:K26148,RefSeq:WP_001545711.1,SO:0001217,UniParc:UPI0001C22F38,UniRef:UniRef100_A0A7I0L4D1,UniRef:UniRef50_P32701,UniRef:UniRef90_P32701;ec_number=3.1.4.52
contig_1	Pyrodigal	gene	4289673	4289996	.	-	.	ID=GCA000010485_04199_gene;locus_tag=GCA000010485_04199;gene=soxS
contig_1	Pyrodigal	CDS	4289673	4289996	.	-	0	ID=GCA000010485_04199;Name=regulatory protein SoxS;locus_tag=GCA000010485_04199;product=regulatory protein SoxS;Dbxref=GO:0003700,GO:0005737,GO:0043565;gene=soxS;Parent=GCA000010485_04199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,KEGG:K13631,RefSeq:WP_000019358.1,SO:0001217,UniParc:UPI000016554E,UniRef:UniRef100_P0A9E2,UniRef:UniRef50_P0A9E2,UniRef:UniRef90_P0A9E2
contig_1	Pyrodigal	gene	4290082	4290546	.	+	.	ID=GCA000010485_04200_gene;locus_tag=GCA000010485_04200;gene=soxR
contig_1	Pyrodigal	CDS	4290082	4290546	.	+	0	ID=GCA000010485_04200;Name=redox-sensitive transcriptional activator SoxR;locus_tag=GCA000010485_04200;product=redox-sensitive transcriptional activator SoxR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0006979,GO:0046872,GO:0051537;gene=soxR;Parent=GCA000010485_04200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000412686,COG:COG0789,COG:K,KEGG:K13639,RefSeq:WP_000412431.1,SO:0001217,UniParc:UPI00000DF39A,UniRef:UniRef100_E2QJU8,UniRef:UniRef50_P0ACS2,UniRef:UniRef90_P0ACS2
contig_1	Infernal	gene	4290539	4290679	.	-	.	ID=GCA000010485_04201_gene;locus_tag=GCA000010485_04201;gene=sraL
contig_1	Infernal	ncRNA	4290539	4290679	1.5e-24	-	.	ID=GCA000010485_04201;Name=sraL Hfq binding RNA;locus_tag=GCA000010485_04201;gene=sraL;product=sraL Hfq binding RNA;Dbxref=RFAM:RF01408;Parent=GCA000010485_04201_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01408
contig_1	Pyrodigal	gene	4291093	4292442	.	+	.	ID=GCA000010485_04202_gene;locus_tag=GCA000010485_04202;gene=ghxP
contig_1	Pyrodigal	CDS	4291093	4292442	.	+	0	ID=GCA000010485_04202;Name=guanine/hypoxanthine transporter GhxP;locus_tag=GCA000010485_04202;product=guanine/hypoxanthine transporter GhxP;gene=ghxP;Parent=GCA000010485_04202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000106882,KEGG:K06901,RefSeq:WP_000106892.1,SO:0001217,UniParc:UPI00000DF39C,UniRef:UniRef100_E2QJU9,UniRef:UniRef50_Q46817,UniRef:UniRef90_E2QJU9
contig_1	Pyrodigal	gene	4292593	4294242	.	+	.	ID=GCA000010485_04203_gene;locus_tag=GCA000010485_04203;gene=yjcE
contig_1	Pyrodigal	CDS	4292593	4294242	.	+	0	ID=GCA000010485_04203;Name=Na+/H+ antiporter;locus_tag=GCA000010485_04203;product=Na+/H+ antiporter;Dbxref=GO:0005886,GO:0006814,GO:0006885,GO:0015385,GO:0015386,GO:0016020,GO:0051453,GO:0071805,GO:0098719,GO:1902600;gene=yjcE;Parent=GCA000010485_04203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,KEGG:K24163,RefSeq:WP_000402206.1,SO:0001217,UniParc:UPI00000DF39D,UniRef:UniRef100_E2QJV0,UniRef:UniRef50_P32703,UniRef:UniRef90_P32703
contig_1	Pyrodigal	gene	4294278	4295162	.	-	.	ID=GCA000010485_04204_gene;locus_tag=GCA000010485_04204;gene=lysR
contig_1	Pyrodigal	CDS	4294278	4295162	.	-	0	ID=GCA000010485_04204;Name=LysR family transcriptional regulator;locus_tag=GCA000010485_04204;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000010485_04204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000354953.1,SO:0001217,UniParc:UPI0000D50E60,UniRef:UniRef100_E2QJV1,UniRef:UniRef50_A8AN34,UniRef:UniRef90_E2QJV1
contig_1	Pyrodigal	gene	4295266	4295676	.	+	.	ID=GCA000010485_04205_gene;locus_tag=GCA000010485_04205;gene=cidA
contig_1	Pyrodigal	CDS	4295266	4295676	.	+	0	ID=GCA000010485_04205;Name=Holin-like protein CidA;locus_tag=GCA000010485_04205;product=Holin-like protein CidA;gene=cidA;Parent=GCA000010485_04205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001143718.1,SO:0001217,UniParc:UPI00005EF7F1,UniRef:UniRef100_E2QJV2,UniRef:UniRef50_A0A0H3CH56,UniRef:UniRef90_A0A0H2VFS5
contig_1	Pyrodigal	gene	4295669	4296358	.	+	.	ID=GCA000010485_04206_gene;locus_tag=GCA000010485_04206;gene=lrgB
contig_1	Pyrodigal	CDS	4295669	4296358	.	+	0	ID=GCA000010485_04206;Name=LrgB family protein;locus_tag=GCA000010485_04206;product=LrgB family protein;gene=lrgB;Parent=GCA000010485_04206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001273403.1,SO:0001217,UniParc:UPI00000DF3A1,UniRef:UniRef100_E2QJV3,UniRef:UniRef50_A0A090UWY2,UniRef:UniRef90_A8AN32
contig_1	Pyrodigal	gene	4296397	4298046	.	-	.	ID=GCA000010485_04207_gene;locus_tag=GCA000010485_04207;gene=actP
contig_1	Pyrodigal	CDS	4296397	4298046	.	-	0	ID=GCA000010485_04207;Name=cation/acetate symporter ActP;locus_tag=GCA000010485_04207;product=cation/acetate symporter ActP;Dbxref=GO:0005886,GO:0006814,GO:0006847,GO:0015123,GO:0015293,GO:0015370,GO:0031402,GO:0043879;gene=actP;Parent=GCA000010485_04207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000832548.1,SO:0001217,UniParc:UPI00005EF7F3,UniRef:UniRef100_B7NSM7,UniRef:UniRef50_P32705,UniRef:UniRef90_P32705
contig_1	Pyrodigal	gene	4298043	4298357	.	-	.	ID=GCA000010485_04208_gene;locus_tag=GCA000010485_04208;gene=yjcH
contig_1	Pyrodigal	CDS	4298043	4298357	.	-	0	ID=GCA000010485_04208;Name=Inner membrane protein YjcH;locus_tag=GCA000010485_04208;product=Inner membrane protein YjcH;Dbxref=GO:0005886;gene=yjcH;Parent=GCA000010485_04208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296646.1,SO:0001217,UniParc:UPI00000D0C56,UniRef:UniRef100_C3SHA7,UniRef:UniRef50_P0AF54,UniRef:UniRef90_P0AF54
contig_1	Infernal	gene	4298449	4298519	.	+	.	ID=GCA000010485_04209_gene;locus_tag=GCA000010485_04209;gene=naRNA4
contig_1	Infernal	ncRNA	4298449	4298519	6.3e-10	+	.	ID=GCA000010485_04209;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04209;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04209_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4298567	4300525	.	-	.	ID=GCA000010485_04210_gene;locus_tag=GCA000010485_04210;gene=acs
contig_1	Pyrodigal	CDS	4298567	4300525	.	-	0	ID=GCA000010485_04210;Name=acetate--CoA ligase;locus_tag=GCA000010485_04210;product=acetate--CoA ligase;Dbxref=GO:0003987,GO:0005524,GO:0005829,GO:0006085,GO:0006935,GO:0016208,GO:0018394,GO:0019427,GO:0033558,GO:0034421,GO:0045733,GO:0046872,GO:0050218;gene=acs;Parent=GCA000010485_04210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0365,COG:I,RefSeq:WP_000078193.1,SO:0001217,UniParc:UPI0001C22F39,UniRef:UniRef100_A0A061YD17,UniRef:UniRef50_P27550,UniRef:UniRef90_P27550;ec_number=6.2.1.1
contig_1	Bakta	gene	4300765	4300821	.	+	.	ID=GCA000010485_04211_gene;locus_tag=GCA000010485_04211;inference=ab initio prediction:Bakta;gene=ytcB
contig_1	Bakta	CDS	4300765	4300821	.	+	0	ID=GCA000010485_04211;Name=Protein YtcB;locus_tag=GCA000010485_04211;product=Protein YtcB;gene=ytcB;Parent=GCA000010485_04211_gene;Note=RefSeq:WP_240812435.1,SO:0001217,UniParc:UPI001E25D3BC,UniRef:UniRef100_P0DV20,UniRef:UniRef50_P0DV20,UniRef:UniRef90_P0DV20
contig_1	Pyrodigal	gene	4300917	4302353	.	+	.	ID=GCA000010485_04212_gene;locus_tag=GCA000010485_04212;gene=nrfA
contig_1	Pyrodigal	CDS	4300917	4302353	.	+	0	ID=GCA000010485_04212;Name=ammonia-forming nitrite reductase cytochrome c552 subunit;locus_tag=GCA000010485_04212;product=ammonia-forming nitrite reductase cytochrome c552 subunit;Dbxref=GO:0005506,GO:0005509,GO:0008152,GO:0019645,GO:0020037,GO:0030288,GO:0042128,GO:0042279,GO:0042597;gene=nrfA;Parent=GCA000010485_04212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03385,RefSeq:WP_000196879.1,SO:0001217,UniParc:UPI00000E4AAB,UniRef:UniRef100_B7UPN8,UniRef:UniRef50_P0ABK9,UniRef:UniRef90_P0ABK9;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	4302398	4302964	.	+	.	ID=GCA000010485_04213_gene;locus_tag=GCA000010485_04213;gene=nrfA
contig_1	Pyrodigal	CDS	4302398	4302964	.	+	0	ID=GCA000010485_04213;Name=ammonia-forming nitrite reductase cytochrome c552 subunit;locus_tag=GCA000010485_04213;product=ammonia-forming nitrite reductase cytochrome c552 subunit;Dbxref=GO:0005509,GO:0008152,GO:0020037,GO:0042279,GO:0042597;gene=nrfA;Parent=GCA000010485_04213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03385,RefSeq:WP_001296647.1,SO:0001217,UniParc:UPI00005F2007,UniRef:UniRef100_A0A376NYE6,UniRef:UniRef50_A0A376NYE6,UniRef:UniRef90_A0A376NYE6;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	4302961	4303632	.	+	.	ID=GCA000010485_04214_gene;locus_tag=GCA000010485_04214;gene=nrfC
contig_1	Pyrodigal	CDS	4302961	4303632	.	+	0	ID=GCA000010485_04214;Name=cytochrome c nitrite reductase Fe-S protein;locus_tag=GCA000010485_04214;product=cytochrome c nitrite reductase Fe-S protein;Dbxref=GO:0042279,GO:0046872,GO:0051539;gene=nrfC;Parent=GCA000010485_04214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220293.1,SO:0001217,UniParc:UPI0001C22F3A,UniRef:UniRef100_A0A061YKE4,UniRef:UniRef50_P0AAK7,UniRef:UniRef90_P0AAK7;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	4303629	4304585	.	+	.	ID=GCA000010485_04215_gene;locus_tag=GCA000010485_04215;gene=nrfD
contig_1	Pyrodigal	CDS	4303629	4304585	.	+	0	ID=GCA000010485_04215;Name=cytochrome c nitrite reductase subunit NrfD;locus_tag=GCA000010485_04215;product=cytochrome c nitrite reductase subunit NrfD;Dbxref=GO:0005886;gene=nrfD;Parent=GCA000010485_04215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000195167.1,SO:0001217,UniParc:UPI00005AAC38,UniRef:UniRef100_A0A061KYU6,UniRef:UniRef50_P32709,UniRef:UniRef90_P32709;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	4304701	4306323	.	+	.	ID=GCA000010485_04216_gene;locus_tag=GCA000010485_04216;gene=nrfE
contig_1	Pyrodigal	CDS	4304701	4306323	.	+	0	ID=GCA000010485_04216;Name=Heme lyase subunit NrfE;locus_tag=GCA000010485_04216;product=Heme lyase subunit NrfE;gene=nrfE;Parent=GCA000010485_04216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04016,SO:0001217,UniRef:UniRef50_W0L3S9,UniRef:UniRef90_A0A376NYZ7
contig_1	Pyrodigal	gene	4306316	4306699	.	+	.	ID=GCA000010485_04217_gene;locus_tag=GCA000010485_04217;gene=nrfF
contig_1	Pyrodigal	CDS	4306316	4306699	.	+	0	ID=GCA000010485_04217;Name=heme lyase NrfEFG subunit NrfF;locus_tag=GCA000010485_04217;product=heme lyase NrfEFG subunit NrfF;Dbxref=GO:0005886,GO:0042597,GO:0046872;gene=nrfF;Parent=GCA000010485_04217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001032537.1,SO:0001217,UniParc:UPI00005EF7F7,UniRef:UniRef100_A0A067H8H6,UniRef:UniRef50_P32711,UniRef:UniRef90_P32711
contig_1	Pyrodigal	gene	4306696	4307292	.	+	.	ID=GCA000010485_04218_gene;locus_tag=GCA000010485_04218;gene=nrfG
contig_1	Pyrodigal	CDS	4306696	4307292	.	+	0	ID=GCA000010485_04218;Name=heme lyase NrfEFG subunit NrfG;locus_tag=GCA000010485_04218;product=heme lyase NrfEFG subunit NrfG;gene=nrfG;Parent=GCA000010485_04218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04018,RefSeq:WP_000812986.1,SO:0001217,UniParc:UPI0001C22F3C,UniRef:UniRef100_A0A061YJB5,UniRef:UniRef50_P32712,UniRef:UniRef90_P32712
contig_1	Pyrodigal	gene	4307635	4308948	.	+	.	ID=GCA000010485_04219_gene;locus_tag=GCA000010485_04219;gene=gltP
contig_1	Pyrodigal	CDS	4307635	4308948	.	+	0	ID=GCA000010485_04219;Name=glutamate/aspartate:proton symporter GltP;locus_tag=GCA000010485_04219;product=glutamate/aspartate:proton symporter GltP;Dbxref=GO:0005280,GO:0005886,GO:0006835,GO:0015293,GO:0016020,GO:0022857;gene=gltP;Parent=GCA000010485_04219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1301,KEGG:K11102,RefSeq:WP_000789588.1,SO:0001217,UniParc:UPI0001C22F3D,UniRef:UniRef100_A0A066SU34,UniRef:UniRef50_P21345,UniRef:UniRef90_P21345
contig_1	Infernal	gene	4309031	4309101	.	+	.	ID=GCA000010485_04220_gene;locus_tag=GCA000010485_04220;gene=naRNA4
contig_1	Infernal	ncRNA	4309031	4309101	4.9e-11	+	.	ID=GCA000010485_04220;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04220;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04220_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4309145	4309215	.	+	.	ID=GCA000010485_04221_gene;locus_tag=GCA000010485_04221;gene=naRNA4
contig_1	Infernal	ncRNA	4309145	4309215	2.1e-11	+	.	ID=GCA000010485_04221;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04221;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04221_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4309259	4309328	.	+	.	ID=GCA000010485_04222_gene;locus_tag=GCA000010485_04222;gene=naRNA4
contig_1	Infernal	ncRNA	4309259	4309328	5.9e-10	+	.	ID=GCA000010485_04222;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04222;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04222_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4309437	4310126	.	-	.	ID=GCA000010485_04223_gene;locus_tag=GCA000010485_04223;gene=yjcO
contig_1	Pyrodigal	CDS	4309437	4310126	.	-	0	ID=GCA000010485_04223;Name=putative protein YjcO;locus_tag=GCA000010485_04223;product=putative protein YjcO;gene=yjcO;Parent=GCA000010485_04223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296650.1,SO:0001217,UniParc:UPI0000DAD125,UniRef:UniRef100_E2QJW5,UniRef:UniRef50_P0AF56,UniRef:UniRef90_P0AF56
contig_1	Pyrodigal	gene	4310237	4310941	.	-	.	ID=GCA000010485_04224_gene;locus_tag=GCA000010485_04224;gene=gsiA
contig_1	Pyrodigal	CDS	4310237	4310941	.	-	0	ID=GCA000010485_04224;Name=Glutathione import ATP-binding protein GsiA;locus_tag=GCA000010485_04224;product=Glutathione import ATP-binding protein GsiA;gene=gsiA;Parent=GCA000010485_04224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000156927.1,SO:0001217,UniParc:UPI00000DF3AC,UniRef:UniRef100_E2QJW6,UniRef:UniRef50_A0A3P8L100,UniRef:UniRef90_A0A370V0U8
contig_1	Pyrodigal	gene	4310928	4311764	.	-	.	ID=GCA000010485_04225_gene;locus_tag=GCA000010485_04225
contig_1	Pyrodigal	CDS	4310928	4311764	.	-	0	ID=GCA000010485_04225;Name=ABC-type dipeptide transporter;locus_tag=GCA000010485_04225;product=ABC-type dipeptide transporter;Parent=GCA000010485_04225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000132446.1,SO:0001217,UniParc:UPI00000439D0,UniRef:UniRef100_A0A061YL37,UniRef:UniRef50_V3R4A5,UniRef:UniRef90_A0A061YL37
contig_1	Pyrodigal	gene	4311757	4312590	.	-	.	ID=GCA000010485_04226_gene;locus_tag=GCA000010485_04226
contig_1	Pyrodigal	CDS	4311757	4312590	.	-	0	ID=GCA000010485_04226;Name=ABC transporter permease;locus_tag=GCA000010485_04226;product=ABC transporter permease;Parent=GCA000010485_04226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001131975.1,SO:0001217,UniParc:UPI0001C22F3F,UniRef:UniRef100_A0A061L2N2,UniRef:UniRef50_V3PWX2,UniRef:UniRef90_A0A0D8VW37
contig_1	Pyrodigal	gene	4312590	4313639	.	-	.	ID=GCA000010485_04227_gene;locus_tag=GCA000010485_04227
contig_1	Pyrodigal	CDS	4312590	4313639	.	-	0	ID=GCA000010485_04227;Name=Transporter permease;locus_tag=GCA000010485_04227;product=Transporter permease;Parent=GCA000010485_04227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001523696.1,SO:0001217,UniParc:UPI0001E8CE93,UniRef:UniRef100_F4T7C9,UniRef:UniRef50_A0A169Q4F2,UniRef:UniRef90_A0A1V2T417
contig_1	Pyrodigal	gene	4313739	4315307	.	-	.	ID=GCA000010485_04228_gene;locus_tag=GCA000010485_04228;gene=ddpA
contig_1	Pyrodigal	CDS	4313739	4315307	.	-	0	ID=GCA000010485_04228;Name=Putative D%2CD-dipeptide-binding periplasmic protein DdpA;locus_tag=GCA000010485_04228;product=Putative D%2CD-dipeptide-binding periplasmic protein DdpA;gene=ddpA;Parent=GCA000010485_04228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000592284.1,SO:0001217,UniParc:UPI0001C22F41,UniRef:UniRef100_A0A7I0KVG2,UniRef:UniRef50_V5Z5R4,UniRef:UniRef90_A0A370V0U7
contig_1	Pyrodigal	gene	4315682	4317829	.	-	.	ID=GCA000010485_04229_gene;locus_tag=GCA000010485_04229;gene=fdhF
contig_1	Pyrodigal	CDS	4315682	4317829	.	-	0	ID=GCA000010485_04229;Name=formate dehydrogenase subunit alpha;locus_tag=GCA000010485_04229;product=formate dehydrogenase subunit alpha;Dbxref=GO:0005829,GO:0006007,GO:0008863,GO:0009061,GO:0009326,GO:0015942,GO:0015944,GO:0016020,GO:0016903,GO:0019628,GO:0019645,GO:0022904,GO:0043546,GO:0046872,GO:0051539;gene=fdhF;Parent=GCA000010485_04229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3383,RefSeq:WP_011076734.1,SO:0001217,UniParc:UPI0000167E05,UniRef:UniRef100_A0A1X9VEU7,UniRef:UniRef50_P07658,UniRef:UniRef90_P07658,codon on position 140 is a selenocysteine codon;ec_number=1.17.98.4;transl_except=(pos:complement(4317410..4317412)%2Caa:Sec)
contig_1	Infernal	regulatory_region	4317363	4317417	1.6e-14	-	.	ID=EFPPCJGBKI_306;Name=Selenocysteine insertion sequence 2;product=Selenocysteine insertion sequence 2;Dbxref=RFAM:RF01988;inference=profile:Rfam:RF01988;Note=SO:1001268;regulatory_class=recoding_stimulatory_region
contig_1	Pyrodigal	gene	4318027	4319493	.	-	.	ID=GCA000010485_04230_gene;locus_tag=GCA000010485_04230;gene=mdtP
contig_1	Pyrodigal	CDS	4318027	4319493	.	-	0	ID=GCA000010485_04230;Name=multidrug efflux transporter outer membrane subunit MdtP;locus_tag=GCA000010485_04230;product=multidrug efflux transporter outer membrane subunit MdtP;Dbxref=GO:0009279,GO:0015562,GO:0016020,GO:0022857,GO:0046677,GO:0055085,GO:1990351;gene=mdtP;Parent=GCA000010485_04230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000610601,KEGG:K15550,RefSeq:WP_000610565.1,SO:0001217,UniParc:UPI0001C22F42,UniRef:UniRef100_A0A237D321,UniRef:UniRef50_P32714,UniRef:UniRef90_P32714
contig_1	Pyrodigal	gene	4319490	4321541	.	-	.	ID=GCA000010485_04231_gene;locus_tag=GCA000010485_04231;gene=mdtO
contig_1	Pyrodigal	CDS	4319490	4321541	.	-	0	ID=GCA000010485_04231;Name=multidrug efflux transporter permease subunit MdtO;locus_tag=GCA000010485_04231;product=multidrug efflux transporter permease subunit MdtO;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=mdtO;Parent=GCA000010485_04231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001275207,RefSeq:WP_001275177.1,SO:0001217,UniParc:UPI0002A452FC,UniRef:UniRef100_A0A7I0KVA4,UniRef:UniRef50_P32715,UniRef:UniRef90_P32715
contig_1	Pyrodigal	gene	4321541	4322572	.	-	.	ID=GCA000010485_04232_gene;locus_tag=GCA000010485_04232;gene=mdtN
contig_1	Pyrodigal	CDS	4321541	4322572	.	-	0	ID=GCA000010485_04232;Name=multidrug efflux transporter periplasmic adaptor subunit MdtN;locus_tag=GCA000010485_04232;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;Dbxref=GO:0005886,GO:0042910,GO:0046677,GO:1990961;gene=mdtN;Parent=GCA000010485_04232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000446378,KEGG:K15549,RefSeq:WP_000446365.1,SO:0001217,UniParc:UPI00000DF3B2,UniRef:UniRef100_Q8FAX1,UniRef:UniRef50_P32716,UniRef:UniRef90_P32716
contig_1	Pyrodigal	gene	4322591	4322866	.	-	.	ID=GCA000010485_04233_gene;locus_tag=GCA000010485_04233;gene=ytcA
contig_1	Pyrodigal	CDS	4322591	4322866	.	-	0	ID=GCA000010485_04233;Name=putative protein YtcA;locus_tag=GCA000010485_04233;product=putative protein YtcA;Dbxref=GO:0005886;gene=ytcA;Parent=GCA000010485_04233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001528127.1,SO:0001217,UniParc:UPI0001C22F77,UniRef:UniRef100_A0A3K2ZN08,UniRef:UniRef50_Q3YUQ3,UniRef:UniRef90_Q3YUQ3
contig_1	Pyrodigal	gene	4323075	4325060	.	-	.	ID=GCA000010485_04234_gene;locus_tag=GCA000010485_04234;gene=yjcS
contig_1	Pyrodigal	CDS	4323075	4325060	.	-	0	ID=GCA000010485_04234;Name=alkyl sulfatase YjcS;locus_tag=GCA000010485_04234;product=alkyl sulfatase YjcS;Dbxref=GO:0018741,GO:0018909,GO:0030288,GO:0046872,GO:0046983;gene=yjcS;Parent=GCA000010485_04234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001066019,KEGG:K25227,RefSeq:WP_001545713.1,SO:0001217,UniParc:UPI0001C22F78,UniRef:UniRef100_A0A7I0L579,UniRef:UniRef50_P32717,UniRef:UniRef90_P32717;ec_number=3.1.6.21
contig_1	Pyrodigal	gene	4325333	4326262	.	-	.	ID=GCA000010485_04235_gene;locus_tag=GCA000010485_04235;gene=alsK
contig_1	Pyrodigal	CDS	4325333	4326262	.	-	0	ID=GCA000010485_04235;Name=allose kinase;locus_tag=GCA000010485_04235;product=allose kinase;Dbxref=GO:0004340,GO:0004396,GO:0005524,GO:0008787,GO:0019200,GO:0019316;gene=alsK;Parent=GCA000010485_04235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00881,RefSeq:WP_001171676.1,SO:0001217,UniParc:UPI000191E98F,UniRef:UniRef100_A0A0V9RFS1,UniRef:UniRef50_P32718,UniRef:UniRef90_P32718;ec_number=2.7.1.55
contig_1	Pyrodigal	gene	4326246	4326941	.	-	.	ID=GCA000010485_04236_gene;locus_tag=GCA000010485_04236;gene=alsE
contig_1	Pyrodigal	CDS	4326246	4326941	.	-	0	ID=GCA000010485_04236;Name=D-allulose-6-phosphate 3-epimerase;locus_tag=GCA000010485_04236;product=D-allulose-6-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0005829,GO:0005975,GO:0009052,GO:0019316,GO:0034700,GO:0046872;gene=alsE;Parent=GCA000010485_04236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001311314,KEGG:K17195,RefSeq:WP_001314355.1,SO:0001217,UniParc:UPI0000E4523F,UniRef:UniRef100_A0A0D6HLG2,UniRef:UniRef50_P32719,UniRef:UniRef90_P32719;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	4326952	4327932	.	-	.	ID=GCA000010485_04237_gene;locus_tag=GCA000010485_04237;gene=alsC
contig_1	Pyrodigal	CDS	4326952	4327932	.	-	0	ID=GCA000010485_04237;Name=D-allose ABC transporter permease;locus_tag=GCA000010485_04237;product=D-allose ABC transporter permease;Dbxref=GO:0005886,GO:0015752,GO:0015754,GO:0016020,GO:0022857,GO:0055052;gene=alsC;Parent=GCA000010485_04237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,KEGG:K10550,RefSeq:WP_000507104.1,SO:0001217,UniParc:UPI00005EF803,UniRef:UniRef100_A0A0L6NFX0,UniRef:UniRef50_P32720,UniRef:UniRef90_P32720;ec_number=7.5.2.-
contig_1	Pyrodigal	gene	4327911	4329443	.	-	.	ID=GCA000010485_04238_gene;locus_tag=GCA000010485_04238;gene=alsA
contig_1	Pyrodigal	CDS	4327911	4329443	.	-	0	ID=GCA000010485_04238;Name=D-allose ABC transporter ATP-binding protein AlsA;locus_tag=GCA000010485_04238;product=D-allose ABC transporter ATP-binding protein AlsA;gene=alsA;Parent=GCA000010485_04238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,KEGG:K10551,RefSeq:WP_000235244.1,SO:0001217,UniParc:UPI0001C22F79,UniRef:UniRef100_UPI0001C22F79,UniRef:UniRef50_P32721,UniRef:UniRef90_A0A2I5SWR5;ec_number=7.5.2.8
contig_1	Pyrodigal	gene	4329570	4330505	.	-	.	ID=GCA000010485_04239_gene;locus_tag=GCA000010485_04239;gene=alsB
contig_1	Pyrodigal	CDS	4329570	4330505	.	-	0	ID=GCA000010485_04239;Name=D-allose transporter substrate-binding protein;locus_tag=GCA000010485_04239;product=D-allose transporter substrate-binding protein;Dbxref=GO:0015752,GO:0015754,GO:0016020,GO:0030288,GO:0048029,GO:0055052;gene=alsB;Parent=GCA000010485_04239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_001361478.1,SO:0001217,UniParc:UPI000188664B,UniRef:UniRef100_A0A0D8VZC4,UniRef:UniRef50_P39265,UniRef:UniRef90_P39265;ec_number=7.5.2.-
contig_1	Pyrodigal	gene	4330564	4331454	.	-	.	ID=GCA000010485_04240_gene;locus_tag=GCA000010485_04240;gene=alsR
contig_1	Pyrodigal	CDS	4330564	4331454	.	-	0	ID=GCA000010485_04240;Name=als operon DNA-binding transcriptional repressor AlsR;locus_tag=GCA000010485_04240;product=als operon DNA-binding transcriptional repressor AlsR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0045892,GO:0097367,GO:1901135;gene=alsR;Parent=GCA000010485_04240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000083216,BlastRules:WP_003227859,COG:COG1737,COG:K,KEGG:K23238,RefSeq:WP_000083216.1,SO:0001217,UniParc:UPI0000134644,UniRef:UniRef100_P0ACS7,UniRef:UniRef50_P0ACS7,UniRef:UniRef90_P0ACS7
contig_1	Pyrodigal	gene	4331813	4332262	.	+	.	ID=GCA000010485_04241_gene;locus_tag=GCA000010485_04241;gene=rpiB
contig_1	Pyrodigal	CDS	4331813	4332262	.	+	0	ID=GCA000010485_04241;Name=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;locus_tag=GCA000010485_04241;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;Dbxref=GO:0004751,GO:0008786,GO:0009052,GO:0019316;gene=rpiB;Parent=GCA000010485_04241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000716794,KEGG:K01808,RefSeq:WP_000716792.1,SO:0001217,UniParc:UPI000187C165,UniRef:UniRef100_E2QJY3,UniRef:UniRef50_P37351,UniRef:UniRef90_P37351;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	4332331	4332687	.	+	.	ID=GCA000010485_04242_gene;locus_tag=GCA000010485_04242;gene=yjdP
contig_1	Pyrodigal	CDS	4332331	4332687	.	+	0	ID=GCA000010485_04242;Name=DDRRRQL repeat protein YjdP;locus_tag=GCA000010485_04242;product=DDRRRQL repeat protein YjdP;gene=yjdP;Parent=GCA000010485_04242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000819726.1,SO:0001217,UniParc:UPI0001C22F7A,UniRef:UniRef100_A0A1U9TX56,UniRef:UniRef50_Q8X3J8,UniRef:UniRef90_A0A0H3MN46
contig_1	Pyrodigal	gene	4332715	4333473	.	-	.	ID=GCA000010485_04243_gene;locus_tag=GCA000010485_04243;gene=phnP
contig_1	Pyrodigal	CDS	4332715	4333473	.	-	0	ID=GCA000010485_04243;Name=phosphonate metabolism protein PhnP;locus_tag=GCA000010485_04243;product=phosphonate metabolism protein PhnP;Dbxref=GO:0008081,GO:0019700,GO:0030145,GO:0042803,GO:0103043;gene=phnP;Parent=GCA000010485_04243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1235,COG:P,KEGG:K06167,RefSeq:WP_000052746.1,SO:0001217,UniParc:UPI0001C22F7B,UniRef:UniRef100_A0A061YD01,UniRef:UniRef50_P16692,UniRef:UniRef90_P16692;ec_number=3.1.4.55
contig_1	Pyrodigal	gene	4333475	4333909	.	-	.	ID=GCA000010485_04244_gene;locus_tag=GCA000010485_04244;gene=phnO
contig_1	Pyrodigal	CDS	4333475	4333909	.	-	0	ID=GCA000010485_04244;Name=aminoalkylphosphonate N-acetyltransferase;locus_tag=GCA000010485_04244;product=aminoalkylphosphonate N-acetyltransferase;Dbxref=GO:0008080,GO:0033051,GO:0061733;gene=phnO;Parent=GCA000010485_04244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1246,COG:E,RefSeq:WP_001110490.1,SO:0001217,UniParc:UPI00001319A4,UniRef:UniRef100_P16691,UniRef:UniRef50_Q8ZKE6,UniRef:UniRef90_P16691;ec_number=2.3.1.280
contig_1	Pyrodigal	gene	4333896	4334453	.	-	.	ID=GCA000010485_04245_gene;locus_tag=GCA000010485_04245;gene=phnN
contig_1	Pyrodigal	CDS	4333896	4334453	.	-	0	ID=GCA000010485_04245;Name=ribose 1%2C5-bisphosphokinase;locus_tag=GCA000010485_04245;product=ribose 1%2C5-bisphosphokinase;Dbxref=GO:0005524,GO:0006015,GO:0019634,GO:0033863;gene=phnN;Parent=GCA000010485_04245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3709,COG:G,RefSeq:WP_000145990.1,SO:0001217,UniParc:UPI0001C22F7C,UniRef:UniRef100_A0A2X1MXI1,UniRef:UniRef50_P16690,UniRef:UniRef90_P16690;ec_number=2.7.4.23
contig_1	Pyrodigal	gene	4334453	4335589	.	-	.	ID=GCA000010485_04246_gene;locus_tag=GCA000010485_04246;gene=phnM
contig_1	Pyrodigal	CDS	4334453	4335589	.	-	0	ID=GCA000010485_04246;Name=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;locus_tag=GCA000010485_04246;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;Dbxref=GO:0016810,GO:0019700;gene=phnM;Parent=GCA000010485_04246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3454,COG:P,RefSeq:WP_000586260.1,SO:0001217,UniParc:UPI0001C22F7D,UniRef:UniRef100_A0A7I0KVE2,UniRef:UniRef50_P16689,UniRef:UniRef90_P16689;ec_number=3.6.1.63
contig_1	Pyrodigal	gene	4335586	4336266	.	-	.	ID=GCA000010485_04247_gene;locus_tag=GCA000010485_04247;gene=phnL
contig_1	Pyrodigal	CDS	4335586	4336266	.	-	0	ID=GCA000010485_04247;Name=phosphonate C-P lyase system protein PhnL;locus_tag=GCA000010485_04247;product=phosphonate C-P lyase system protein PhnL;Dbxref=GO:0005524,GO:0015716,GO:0016887,GO:0018835,GO:0019634,GO:0019700,GO:0061693,GO:0061694,GO:1904176;gene=phnL;Parent=GCA000010485_04247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4778,COG:P,RefSeq:WP_000611411.1,SO:0001217,UniParc:UPI00000DF3BE,UniRef:UniRef100_E2QJY9,UniRef:UniRef50_P16679,UniRef:UniRef90_P16679;ec_number=2.7.8.37
contig_1	Pyrodigal	gene	4336377	4337135	.	-	.	ID=GCA000010485_04248_gene;locus_tag=GCA000010485_04248;gene=phnK
contig_1	Pyrodigal	CDS	4336377	4337135	.	-	0	ID=GCA000010485_04248;Name=phosphonate C-P lyase system protein PhnK;locus_tag=GCA000010485_04248;product=phosphonate C-P lyase system protein PhnK;Dbxref=GO:0018835,GO:0019634;gene=phnK;Parent=GCA000010485_04248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001075531.1,SO:0001217,UniParc:UPI0000E45242,UniRef:UniRef100_E2QJZ0,UniRef:UniRef50_A0A7S9D447,UniRef:UniRef90_E2QJZ0
contig_1	Pyrodigal	gene	4337132	4337977	.	-	.	ID=GCA000010485_04249_gene;locus_tag=GCA000010485_04249;gene=phnJ
contig_1	Pyrodigal	CDS	4337132	4337977	.	-	0	ID=GCA000010485_04249;Name=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;locus_tag=GCA000010485_04249;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;gene=phnJ;Parent=GCA000010485_04249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000002303,COG:COG3627,COG:P,KEGG:K06163,RefSeq:WP_000002299.1,SO:0001217,UniParc:UPI000182617A,UniRef:UniRef100_A0A061YL18,UniRef:UniRef50_Q52987,UniRef:UniRef90_G8LID7;ec_number=4.7.1.1
contig_1	Pyrodigal	gene	4337970	4339034	.	-	.	ID=GCA000010485_04250_gene;locus_tag=GCA000010485_04250;gene=phnI
contig_1	Pyrodigal	CDS	4337970	4339034	.	-	0	ID=GCA000010485_04250;Name=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;locus_tag=GCA000010485_04250;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;Dbxref=GO:0015716,GO:0019634,GO:0019700,GO:0061693,GO:0061694,GO:1904176;gene=phnI;Parent=GCA000010485_04250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295388,COG:COG3626,COG:P,KEGG:K06164,RefSeq:WP_001296656.1,SO:0001217,UniParc:UPI0001886652,UniRef:UniRef100_A0A066SU13,UniRef:UniRef50_P16687,UniRef:UniRef90_P16687;ec_number=2.7.8.37
contig_1	Pyrodigal	gene	4339034	4339618	.	-	.	ID=GCA000010485_04251_gene;locus_tag=GCA000010485_04251;gene=phnH
contig_1	Pyrodigal	CDS	4339034	4339618	.	-	0	ID=GCA000010485_04251;Name=phosphonate C-P lyase system protein PhnH;locus_tag=GCA000010485_04251;product=phosphonate C-P lyase system protein PhnH;Dbxref=GO:0019634;gene=phnH;Parent=GCA000010485_04251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3625,COG:P,KEGG:K06165,RefSeq:WP_000171599.1,SO:0001217,UniParc:UPI0001C22F7E,UniRef:UniRef100_A0A066SUE3,UniRef:UniRef50_P16686,UniRef:UniRef90_J7QB40;ec_number=2.7.8.37
contig_1	Pyrodigal	gene	4339615	4340067	.	-	.	ID=GCA000010485_04252_gene;locus_tag=GCA000010485_04252;gene=phnG
contig_1	Pyrodigal	CDS	4339615	4340067	.	-	0	ID=GCA000010485_04252;Name=phosphonate C-P lyase system protein PhnG;locus_tag=GCA000010485_04252;product=phosphonate C-P lyase system protein PhnG;Dbxref=GO:0015716,GO:0019634;gene=phnG;Parent=GCA000010485_04252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3624,COG:P,RefSeq:WP_000542778.1,SO:0001217,UniParc:UPI0001C22F7F,UniRef:UniRef100_A0A061YGT9,UniRef:UniRef50_P16685,UniRef:UniRef90_A0A061YGT9
contig_1	Pyrodigal	gene	4340068	4340793	.	-	.	ID=GCA000010485_04253_gene;locus_tag=GCA000010485_04253;gene=phnF
contig_1	Pyrodigal	CDS	4340068	4340793	.	-	0	ID=GCA000010485_04253;Name=phosphonate metabolism transcriptional regulator PhnF;locus_tag=GCA000010485_04253;product=phosphonate metabolism transcriptional regulator PhnF;Dbxref=GO:0003677,GO:0003700,GO:0015716,GO:0045892;gene=phnF;Parent=GCA000010485_04253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_001296657.1,SO:0001217,UniParc:UPI000187C18F,UniRef:UniRef100_A0A061LP68,UniRef:UniRef50_P16684,UniRef:UniRef90_P16684
contig_1	Pyrodigal	gene	4340814	4341593	.	-	.	ID=GCA000010485_04254_gene;locus_tag=GCA000010485_04254;gene=phnE
contig_1	Pyrodigal	CDS	4340814	4341593	.	-	0	ID=GCA000010485_04254;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000010485_04254;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000010485_04254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_001296658.1,SO:0001217,UniParc:UPI0001C22F80,UniRef:UniRef100_A0A061L3E2,UniRef:UniRef50_A0A140NFA3,UniRef:UniRef90_A0A140NFA3;ec_number=7.3.2.2
contig_1	Infernal	gene	4341612	4341691	.	+	.	ID=GCA000010485_04255_gene;locus_tag=GCA000010485_04255;gene=naRNA4
contig_1	Infernal	ncRNA	4341612	4341691	3.1e-09	+	.	ID=GCA000010485_04255;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04255;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04255_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4341698	4342714	.	-	.	ID=GCA000010485_04256_gene;locus_tag=GCA000010485_04256;gene=phnD
contig_1	Pyrodigal	CDS	4341698	4342714	.	-	0	ID=GCA000010485_04256;Name=phosphonate ABC transporter substrate-binding protein;locus_tag=GCA000010485_04256;product=phosphonate ABC transporter substrate-binding protein;Dbxref=GO:0015716,GO:0042597,GO:0043190,GO:0055085;gene=phnD;Parent=GCA000010485_04256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3221,COG:P,KEGG:K02044,RefSeq:WP_000991976.1,SO:0001217,UniParc:UPI0000D50E7A,UniRef:UniRef100_E2QJZ7,UniRef:UniRef50_P16682,UniRef:UniRef90_P16682;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	4342739	4343527	.	-	.	ID=GCA000010485_04257_gene;locus_tag=GCA000010485_04257;gene=phnC
contig_1	Pyrodigal	CDS	4342739	4343527	.	-	0	ID=GCA000010485_04257;Name=phosphonate ABC transporter ATP-binding protein;locus_tag=GCA000010485_04257;product=phosphonate ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015416,GO:0016887;gene=phnC;Parent=GCA000010485_04257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3638,COG:P,RefSeq:WP_001193415.1,SO:0001217,UniParc:UPI0001C22F81,UniRef:UniRef100_A0A061KY46,UniRef:UniRef50_P16677,UniRef:UniRef90_P16677;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	4343660	4344103	.	-	.	ID=GCA000010485_04258_gene;locus_tag=GCA000010485_04258;gene=yjdN
contig_1	Pyrodigal	CDS	4343660	4344103	.	-	0	ID=GCA000010485_04258;Name=VOC family metalloprotein YjdN;locus_tag=GCA000010485_04258;product=VOC family metalloprotein YjdN;gene=yjdN;Parent=GCA000010485_04258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001131346.1,SO:0001217,UniParc:UPI0001C22F82,UniRef:UniRef100_A0A066T2G9,UniRef:UniRef50_P16681,UniRef:UniRef90_P16681
contig_1	Infernal	gene	4344168	4344245	.	-	.	ID=GCA000010485_04259_gene;locus_tag=GCA000010485_04259;gene=naRNA4
contig_1	Infernal	ncRNA	4344168	4344245	1.6e-13	-	.	ID=GCA000010485_04259;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04259;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04259_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4344263	4344598	.	-	.	ID=GCA000010485_04260_gene;locus_tag=GCA000010485_04260;gene=yjdM
contig_1	Pyrodigal	CDS	4344263	4344598	.	-	0	ID=GCA000010485_04260;Name=Protein YjdM;locus_tag=GCA000010485_04260;product=Protein YjdM;Dbxref=GO:0005829;gene=yjdM;Parent=GCA000010485_04260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2824,COG:R,RefSeq:WP_001300891.1,SO:0001217,UniParc:UPI000013198C,UniRef:UniRef100_P0AFJ1,UniRef:UniRef50_P0AFJ1,UniRef:UniRef90_P0AFJ1
contig_1	Pyrodigal	gene	4345001	4347229	.	+	.	ID=GCA000010485_04261_gene;locus_tag=GCA000010485_04261;gene=crfC
contig_1	Pyrodigal	CDS	4345001	4347229	.	+	0	ID=GCA000010485_04261;Name=clamp-binding protein CrfC;locus_tag=GCA000010485_04261;product=clamp-binding protein CrfC;Dbxref=GO:0005525,GO:0005737,GO:0006260,GO:0007059,GO:0043022;gene=crfC;Parent=GCA000010485_04261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000288541.1,SO:0001217,UniParc:UPI0001C22F83,UniRef:UniRef100_A0A061YL11,UniRef:UniRef50_P0DM85,UniRef:UniRef90_P0DM86
contig_1	Pyrodigal	gene	4347226	4348104	.	+	.	ID=GCA000010485_04262_gene;locus_tag=GCA000010485_04262
contig_1	Pyrodigal	CDS	4347226	4348104	.	+	0	ID=GCA000010485_04262;Name=YjcZ-like family protein;locus_tag=GCA000010485_04262;product=YjcZ-like family protein;Parent=GCA000010485_04262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169156.1,SO:0001217,UniParc:UPI000310CD92,UniRef:UniRef100_UPI000310CD92,UniRef:UniRef50_P39267,UniRef:UniRef90_A0A7A7B7N6
contig_1	Pyrodigal	gene	4348368	4349870	.	+	.	ID=GCA000010485_04263_gene;locus_tag=GCA000010485_04263;gene=proP
contig_1	Pyrodigal	CDS	4348368	4349870	.	+	0	ID=GCA000010485_04263;Name=glycine betaine/L-proline transporter ProP;locus_tag=GCA000010485_04263;product=glycine betaine/L-proline transporter ProP;Dbxref=GO:0005886,GO:0015293,GO:0016020,GO:0022857,GO:0055085;gene=proP;Parent=GCA000010485_04263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03762,RefSeq:WP_001296659.1,SO:0001217,UniParc:UPI0000E45247,UniRef:UniRef100_E2QK03,UniRef:UniRef50_P0C0L7,UniRef:UniRef90_P0C0L7
contig_1	Infernal	gene	4349913	4350078	.	+	.	ID=GCA000010485_04264_gene;locus_tag=GCA000010485_04264;gene=STnc630
contig_1	Infernal	ncRNA	4349913	4350078	1e-30	+	.	ID=GCA000010485_04264;Name=Enterobacterial sRNA STnc630;locus_tag=GCA000010485_04264;product=Enterobacterial sRNA STnc630;Dbxref=RFAM:RF02052;Parent=GCA000010485_04264_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02052
contig_1	Pyrodigal	gene	4349982	4350071	.	+	.	ID=GCA000010485_04265_gene;locus_tag=GCA000010485_04265;gene=pmrR
contig_1	Pyrodigal	CDS	4349982	4350071	.	+	0	ID=GCA000010485_04265;Name=Putative membrane protein PmrR;locus_tag=GCA000010485_04265;product=Putative membrane protein PmrR;Dbxref=GO:0004857,GO:0005886;gene=pmrR;Parent=GCA000010485_04265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000797657.1,SO:0001217,UniParc:UPI0002240CD9,UniRef:UniRef100_G3MTW7,UniRef:UniRef50_G3MTW7,UniRef:UniRef90_G3MTW7
contig_1	Pyrodigal	gene	4350047	4351147	.	-	.	ID=GCA000010485_04266_gene;locus_tag=GCA000010485_04266;gene=pmrB
contig_1	Pyrodigal	CDS	4350047	4351147	.	-	0	ID=GCA000010485_04266;Name=two-component system sensor histidine kinase PmrB;locus_tag=GCA000010485_04266;product=two-component system sensor histidine kinase PmrB;Dbxref=GO:0000155,GO:0000160,GO:0004673,GO:0004721,GO:0005524,GO:0005886,GO:0007165,GO:0010041,GO:0010043;gene=pmrB;Parent=GCA000010485_04266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,KEGG:K07643,RefSeq:WP_001052123.1,SO:0001217,UniParc:UPI00000DF3CB,UniRef:UniRef100_A0A2I5SWU9,UniRef:UniRef50_P30844,UniRef:UniRef90_P30844;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	4351148	4351816	.	-	.	ID=GCA000010485_04267_gene;locus_tag=GCA000010485_04267;gene=pmrA
contig_1	Pyrodigal	CDS	4351148	4351816	.	-	0	ID=GCA000010485_04267;Name=two-component system response regulator BasR;locus_tag=GCA000010485_04267;product=two-component system response regulator BasR;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0005829,GO:0006355,GO:0010041,GO:0032993,GO:0046677;gene=pmrA;Parent=GCA000010485_04267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000697915,KEGG:K07771,RefSeq:WP_000697905.1,SO:0001217,UniParc:UPI000049B4C9,UniRef:UniRef100_A0A066T2B6,UniRef:UniRef50_P36556,UniRef:UniRef90_P30843
contig_1	Pyrodigal	gene	4351813	4353456	.	-	.	ID=GCA000010485_04268_gene;locus_tag=GCA000010485_04268;gene=eptA
contig_1	Pyrodigal	CDS	4351813	4353456	.	-	0	ID=GCA000010485_04268;Name=phosphoethanolamine transferase EptA;locus_tag=GCA000010485_04268;product=phosphoethanolamine transferase EptA;Dbxref=GO:0005886,GO:0009103,GO:0009244,GO:0009245,GO:0016772,GO:0016776,GO:0046677;gene=eptA;Parent=GCA000010485_04268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,KEGG:K03760,RefSeq:WP_001385617.1,SO:0001217,UniParc:UPI0001C22F85,UniRef:UniRef100_A0A7I0L491,UniRef:UniRef50_P30845,UniRef:UniRef90_P30845;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	4353560	4354897	.	-	.	ID=GCA000010485_04269_gene;locus_tag=GCA000010485_04269;gene=adiC
contig_1	Pyrodigal	CDS	4353560	4354897	.	-	0	ID=GCA000010485_04269;Name=arginine/agmatine antiporter;locus_tag=GCA000010485_04269;product=arginine/agmatine antiporter;Dbxref=GO:0005886,GO:0006865,GO:0015297,GO:0016020,GO:0022857,GO:0055085;gene=adiC;Parent=GCA000010485_04269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,KEGG:K03759,RefSeq:WP_000093154.1,SO:0001217,UniParc:UPI000013B545,UniRef:UniRef100_P60061,UniRef:UniRef50_P60061,UniRef:UniRef90_P60061
contig_1	Pyrodigal	gene	4355034	4355795	.	-	.	ID=GCA000010485_04270_gene;locus_tag=GCA000010485_04270;gene=adiY
contig_1	Pyrodigal	CDS	4355034	4355795	.	-	0	ID=GCA000010485_04270;Name=DNA-binding transcriptional activator AdiY;locus_tag=GCA000010485_04270;product=DNA-binding transcriptional activator AdiY;Dbxref=GO:0003700,GO:0043565,GO:0045893;gene=adiY;Parent=GCA000010485_04270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001217060,COG:COG2207,COG:K,KEGG:K03755,RefSeq:WP_001217059.1,SO:0001217,UniParc:UPI000000E877,UniRef:UniRef100_C3SGS7,UniRef:UniRef50_P33234,UniRef:UniRef90_P33234
contig_1	Pyrodigal	gene	4356131	4358401	.	-	.	ID=GCA000010485_04271_gene;locus_tag=GCA000010485_04271;gene=adiA
contig_1	Pyrodigal	CDS	4356131	4358401	.	-	0	ID=GCA000010485_04271;Name=arginine decarboxylase;locus_tag=GCA000010485_04271;product=arginine decarboxylase;Dbxref=GO:0006520,GO:0016831;gene=adiA;Parent=GCA000010485_04271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01584,SO:0001217,UniRef:UniRef50_P28629,UniRef:UniRef90_UPI00146FE03A;ec_number=4.1.1.19
contig_1	Pyrodigal	gene	4358597	4359505	.	-	.	ID=GCA000010485_04272_gene;locus_tag=GCA000010485_04272;gene=melR
contig_1	Pyrodigal	CDS	4358597	4359505	.	-	0	ID=GCA000010485_04272;Name=transcriptional regulator MelR;locus_tag=GCA000010485_04272;product=transcriptional regulator MelR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0043565;gene=melR;Parent=GCA000010485_04272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23237,RefSeq:WP_001090758.1,SO:0001217,UniParc:UPI000012EECF,UniRef:UniRef100_P0ACH8,UniRef:UniRef50_P0ACH8,UniRef:UniRef90_P0ACH8
contig_1	Pyrodigal	gene	4359788	4361143	.	+	.	ID=GCA000010485_04273_gene;locus_tag=GCA000010485_04273;gene=melA
contig_1	Pyrodigal	CDS	4359788	4361143	.	+	0	ID=GCA000010485_04273;Name=alpha-galactosidase;locus_tag=GCA000010485_04273;product=alpha-galactosidase;Dbxref=GO:0004557,GO:0005975,GO:0016616,GO:0046872;gene=melA;Parent=GCA000010485_04273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000986601,COG:COG1486,COG:G,KEGG:K07406,RefSeq:WP_000986621.1,SO:0001217,UniParc:UPI0001C22FB5,UniRef:UniRef100_A0A7I0KX73,UniRef:UniRef50_P06720,UniRef:UniRef90_P06720;ec_number=3.2.1.22
contig_1	Pyrodigal	gene	4361140	4361790	.	-	.	ID=GCA000010485_04274_gene;locus_tag=GCA000010485_04274;gene=yjdF
contig_1	Pyrodigal	CDS	4361140	4361790	.	-	0	ID=GCA000010485_04274;Name=Inner membrane protein YjdF;locus_tag=GCA000010485_04274;product=Inner membrane protein YjdF;Dbxref=GO:0005886;gene=yjdF;Parent=GCA000010485_04274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08984,RefSeq:WP_000198742.1,SO:0001217,UniParc:UPI0001C22FB6,UniRef:UniRef100_A0A2W0HKR0,UniRef:UniRef50_P39270,UniRef:UniRef90_P39270
contig_1	Pyrodigal	gene	4361913	4363559	.	-	.	ID=GCA000010485_04275_gene;locus_tag=GCA000010485_04275;gene=fumB
contig_1	Pyrodigal	CDS	4361913	4363559	.	-	0	ID=GCA000010485_04275;Name=class I fumarate hydratase;locus_tag=GCA000010485_04275;product=class I fumarate hydratase;Dbxref=GO:0004333,GO:0005829,GO:0006099,GO:0006974,GO:0042803,GO:0044010,GO:0046872,GO:0047808,GO:0051539;gene=fumB;Parent=GCA000010485_04275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066639,BlastRules:WP_000066707,COG:C,COG:COG1951,KEGG:K01676,RefSeq:WP_000066699.1,SO:0001217,UniParc:UPI00000DF3CF,UniRef:UniRef100_A0A0D6HN76,UniRef:UniRef50_P0AC33,UniRef:UniRef90_P14407;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	4363637	4364977	.	-	.	ID=GCA000010485_04276_gene;locus_tag=GCA000010485_04276;gene=dcuB
contig_1	Pyrodigal	CDS	4363637	4364977	.	-	0	ID=GCA000010485_04276;Name=anaerobic C4-dicarboxylate transporter DcuB;locus_tag=GCA000010485_04276;product=anaerobic C4-dicarboxylate transporter DcuB;Dbxref=GO:0005886,GO:0015297,GO:0015556;gene=dcuB;Parent=GCA000010485_04276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000899522,COG:COG2704,COG:G,RefSeq:WP_000899522.1,SO:0001217,UniParc:UPI000012903D,UniRef:UniRef100_P0ABN9,UniRef:UniRef50_P0ABN9,UniRef:UniRef90_P0ABN9
contig_1	Pyrodigal	gene	4365548	4366267	.	-	.	ID=GCA000010485_04277_gene;locus_tag=GCA000010485_04277;gene=dcuR
contig_1	Pyrodigal	CDS	4365548	4366267	.	-	0	ID=GCA000010485_04277;Name=two-component system response regulator DcuR;locus_tag=GCA000010485_04277;product=two-component system response regulator DcuR;Dbxref=GO:0000156,GO:0000160,GO:0001216,GO:0003677,GO:0003700,GO:0005737,GO:0006351,GO:0042803,GO:0045893;gene=dcuR;Parent=GCA000010485_04277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07703,RefSeq:WP_000611288.1,SO:0001217,UniParc:UPI000003EB56,UniRef:UniRef100_P0AD01,UniRef:UniRef50_P0AD01,UniRef:UniRef90_P0AD01
contig_1	Pyrodigal	gene	4366264	4367895	.	-	.	ID=GCA000010485_04278_gene;locus_tag=GCA000010485_04278;gene=dcuS
contig_1	Pyrodigal	CDS	4366264	4367895	.	-	0	ID=GCA000010485_04278;Name=Sensor histidine kinase DcuS;locus_tag=GCA000010485_04278;product=Sensor histidine kinase DcuS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0006355;gene=dcuS;Parent=GCA000010485_04278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3290,COG:T,KEGG:K07701,RefSeq:WP_001216464.1,SO:0001217,UniParc:UPI0001C22FB7,UniRef:UniRef100_A0A7I0KV70,UniRef:UniRef50_P0AEC8,UniRef:UniRef90_P0AEC8;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	4368076	4368306	.	+	.	ID=GCA000010485_04279_gene;locus_tag=GCA000010485_04279;gene=yjdI
contig_1	Pyrodigal	CDS	4368076	4368306	.	+	0	ID=GCA000010485_04279;Name=putative protein YjdI;locus_tag=GCA000010485_04279;product=putative protein YjdI;gene=yjdI;Parent=GCA000010485_04279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3592,COG:S,RefSeq:WP_000371709.1,SO:0001217,UniParc:UPI0001C22FB8,UniRef:UniRef100_A0A2W0GX07,UniRef:UniRef50_P0AF59,UniRef:UniRef90_P0AF59
contig_1	Pyrodigal	gene	4368318	4368590	.	+	.	ID=GCA000010485_04280_gene;locus_tag=GCA000010485_04280;gene=yjdJ
contig_1	Pyrodigal	CDS	4368318	4368590	.	+	0	ID=GCA000010485_04280;Name=putative protein YjdJ;locus_tag=GCA000010485_04280;product=putative protein YjdJ;Dbxref=GO:0016747;gene=yjdJ;Parent=GCA000010485_04280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_000405645.1,SO:0001217,UniParc:UPI0001C22FB9,UniRef:UniRef100_A0A066T295,UniRef:UniRef50_P39274,UniRef:UniRef90_P39274
contig_1	Pyrodigal	gene	4368700	4371237	.	-	.	ID=GCA000010485_04281_gene;locus_tag=GCA000010485_04281
contig_1	Pyrodigal	CDS	4368700	4371237	.	-	0	ID=GCA000010485_04281;Name=Fimbrial biogenesis outer membrane usher protein;locus_tag=GCA000010485_04281;product=Fimbrial biogenesis outer membrane usher protein;Parent=GCA000010485_04281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07347,RefSeq:WP_000866257.1,SO:0001217,UniParc:UPI0001C22FBA,UniRef:UniRef100_A0A7I0KVC4,UniRef:UniRef50_A0A7I0KVC4,UniRef:UniRef90_A0A7I0KVC4
contig_1	Pyrodigal	gene	4371265	4371969	.	-	.	ID=GCA000010485_04282_gene;locus_tag=GCA000010485_04282
contig_1	Pyrodigal	CDS	4371265	4371969	.	-	0	ID=GCA000010485_04282;Name=Molecular chaperone;locus_tag=GCA000010485_04282;product=Molecular chaperone;Parent=GCA000010485_04282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001227591.1,SO:0001217,UniParc:UPI0001C22FBB,UniRef:UniRef100_A0A2W0H1B7,UniRef:UniRef50_W1W4R6,UniRef:UniRef90_A0A5N8HNI9
contig_1	Pyrodigal	gene	4372031	4372543	.	-	.	ID=GCA000010485_04283_gene;locus_tag=GCA000010485_04283
contig_1	Pyrodigal	CDS	4372031	4372543	.	-	0	ID=GCA000010485_04283;Name=Fimbrial protein;locus_tag=GCA000010485_04283;product=Fimbrial protein;Parent=GCA000010485_04283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7I0KX65
contig_1	Pyrodigal	gene	4373147	4376857	.	+	.	ID=GCA000010485_04284_gene;locus_tag=GCA000010485_04284;gene=tsh
contig_1	Pyrodigal	CDS	4373147	4376857	.	+	0	ID=GCA000010485_04284;Name=temperature-sensitive protein Tsh;locus_tag=GCA000010485_04284;product=temperature-sensitive protein Tsh;gene=tsh;Parent=GCA000010485_04284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545718.1,SO:0001217,UniParc:UPI0002A2290B,UniRef:UniRef100_A0A7I0KVB8,UniRef:UniRef50_A0A376TP52,UniRef:UniRef90_A0A376TP52,VFDB:VFC0086,VFDB:VFG045818
contig_1	Pyrodigal	gene	4377064	4377546	.	+	.	ID=GCA000010485_04285_gene;locus_tag=GCA000010485_04285
contig_1	Pyrodigal	CDS	4377064	4377546	.	+	0	ID=GCA000010485_04285;Name=Sigma-70 family RNA polymerase sigma factor;locus_tag=GCA000010485_04285;product=Sigma-70 family RNA polymerase sigma factor;Parent=GCA000010485_04285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A3CEAE,UniRef:UniRef100_A0AA36P9Q3,UniRef:UniRef50_A0A6H2GSA4,UniRef:UniRef90_A0AA36P9Q3
contig_1	Pyrodigal	gene	4377794	4378585	.	+	.	ID=GCA000010485_04286_gene;locus_tag=GCA000010485_04286;gene=virF
contig_1	Pyrodigal	CDS	4377794	4378585	.	+	0	ID=GCA000010485_04286;Name=Virulence regulon transcriptional activator VirF;locus_tag=GCA000010485_04286;product=Virulence regulon transcriptional activator VirF;gene=virF;Parent=GCA000010485_04286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001523739.1,SO:0001217,UniParc:UPI0002A38F5B,UniRef:UniRef100_A0AA36PC63,UniRef:UniRef50_D2TIS0,UniRef:UniRef90_A0AAJ3TZG2
contig_1	Pyrodigal	gene	4378706	4378885	.	-	.	ID=GCA000010485_04287_gene;locus_tag=GCA000010485_04287
contig_1	Pyrodigal	CDS	4378706	4378885	.	-	0	ID=GCA000010485_04287;Name=hypothetical protein;locus_tag=GCA000010485_04287;product=hypothetical protein;Parent=GCA000010485_04287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22FBE,UniRef:UniRef100_A0A1U9TXY3,UniRef:UniRef50_W1W6S0,UniRef:UniRef90_W1W6S0
contig_1	Pyrodigal	gene	4379740	4383669	.	+	.	ID=GCA000010485_04288_gene;locus_tag=GCA000010485_04288;gene=espP
contig_1	Pyrodigal	CDS	4379740	4383669	.	+	0	ID=GCA000010485_04288;Name=Serine protease EspP;locus_tag=GCA000010485_04288;product=Serine protease EspP;gene=espP;Parent=GCA000010485_04288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12684,RefSeq:WP_001080127.1,SO:0001217,UniParc:UPI0001C22FC0,UniRef:UniRef100_A0A641DX43,UniRef:UniRef50_Q8FDW4,UniRef:UniRef90_A0A4C7BIX0;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	4383883	4384155	.	+	.	ID=GCA000010485_04289_gene;locus_tag=GCA000010485_04289;gene=yjdJ
contig_1	Pyrodigal	CDS	4383883	4384155	.	+	0	ID=GCA000010485_04289;Name=putative protein YjdJ;locus_tag=GCA000010485_04289;product=putative protein YjdJ;Dbxref=GO:0016747;gene=yjdJ;Parent=GCA000010485_04289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_000405643.1,SO:0001217,UniParc:UPI0001C22FC1,UniRef:UniRef100_A0A7I0KV62,UniRef:UniRef50_P39274,UniRef:UniRef90_P39274
contig_1	Pyrodigal	gene	4384383	4384679	.	+	.	ID=GCA000010485_04290_gene;locus_tag=GCA000010485_04290;gene=ghoS
contig_1	Pyrodigal	CDS	4384383	4384679	.	+	0	ID=GCA000010485_04290;Name=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;locus_tag=GCA000010485_04290;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;Dbxref=GO:0004521;gene=ghoS;Parent=GCA000010485_04290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000398619,KEGG:K18840,RefSeq:WP_001312331.1,SO:0001217,UniParc:UPI0000D50E85,UniRef:UniRef100_A0A0D6HP55,UniRef:UniRef50_P0AF61,UniRef:UniRef90_P0AF61;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	4384707	4384880	.	+	.	ID=GCA000010485_04291_gene;locus_tag=GCA000010485_04291;gene=ghoT
contig_1	Pyrodigal	CDS	4384707	4384880	.	+	0	ID=GCA000010485_04291;Name=type V toxin-antitoxin system toxin GhoT;locus_tag=GCA000010485_04291;product=type V toxin-antitoxin system toxin GhoT;Dbxref=GO:0005886,GO:0016020,GO:0060187;gene=ghoT;Parent=GCA000010485_04291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001173343,KEGG:K18839,RefSeq:WP_001173343.1,SO:0001217,UniParc:UPI000013B54B,UniRef:UniRef100_P64646,UniRef:UniRef50_P64646,UniRef:UniRef90_P64646
contig_1	Pyrodigal	gene	4384999	4386516	.	-	.	ID=GCA000010485_04292_gene;locus_tag=GCA000010485_04292;gene=lysS
contig_1	Pyrodigal	CDS	4384999	4386516	.	-	0	ID=GCA000010485_04292;Name=lysine--tRNA ligase;locus_tag=GCA000010485_04292;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006418,GO:0006430,GO:0016020,GO:0016874,GO:0034605,GO:0036260,GO:0042803;gene=lysS;Parent=GCA000010485_04292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_000003806.1,SO:0001217,UniParc:UPI0000E4524A,UniRef:UniRef100_Q8FAT5,UniRef:UniRef50_P0A8N5,UniRef:UniRef90_P0A8N5;ec_number=6.1.1.6
contig_1	Pyrodigal	gene	4386753	4388210	.	-	.	ID=GCA000010485_04293_gene;locus_tag=GCA000010485_04293;gene=dtpC
contig_1	Pyrodigal	CDS	4386753	4388210	.	-	0	ID=GCA000010485_04293;Name=dipeptide/tripeptide permease DtpC;locus_tag=GCA000010485_04293;product=dipeptide/tripeptide permease DtpC;Dbxref=GO:0005886,GO:0015031,GO:0015078,GO:0015333,GO:0035442,GO:0035443,GO:0042937,GO:0071916,GO:1902600;gene=dtpC;Parent=GCA000010485_04293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000856829,COG:COG3104,COG:E,RefSeq:WP_000856826.1,SO:0001217,UniParc:UPI00000DF3D6,UniRef:UniRef100_A0A061LDA6,UniRef:UniRef50_P39276,UniRef:UniRef90_P39276
contig_1	Pyrodigal	gene	4388269	4390416	.	-	.	ID=GCA000010485_04294_gene;locus_tag=GCA000010485_04294;gene=cadA
contig_1	Pyrodigal	CDS	4388269	4390416	.	-	0	ID=GCA000010485_04294;Name=lysine decarboxylase CadA;locus_tag=GCA000010485_04294;product=lysine decarboxylase CadA;Dbxref=GO:0005737,GO:0006520,GO:0008923;gene=cadA;Parent=GCA000010485_04294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295383,COG:COG1982,COG:E,KEGG:K01582,RefSeq:WP_001296667.1,SO:0001217,UniParc:UPI000176AEC9,UniRef:UniRef100_E2QK23,UniRef:UniRef50_P0A9H3,UniRef:UniRef90_P0A9H3;ec_number=4.1.1.18
contig_1	Pyrodigal	gene	4390496	4391830	.	-	.	ID=GCA000010485_04295_gene;locus_tag=GCA000010485_04295;gene=cadB
contig_1	Pyrodigal	CDS	4390496	4391830	.	-	0	ID=GCA000010485_04295;Name=cadaverine/lysine antiporter;locus_tag=GCA000010485_04295;product=cadaverine/lysine antiporter;Dbxref=GO:0005886,GO:0015293,GO:0015297,GO:0015839,GO:0043872,GO:1903401,GO:1990451;gene=cadB;Parent=GCA000010485_04295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000092909.1,SO:0001217,UniParc:UPI0000001701,UniRef:UniRef100_P0AAE8,UniRef:UniRef50_P0AAE8,UniRef:UniRef90_P0AAE8
contig_1	Pyrodigal	gene	4392196	4393734	.	-	.	ID=GCA000010485_04296_gene;locus_tag=GCA000010485_04296;gene=cadC
contig_1	Pyrodigal	CDS	4392196	4393734	.	-	0	ID=GCA000010485_04296;Name=lysine decarboxylation/transport transcriptional activator CadC;locus_tag=GCA000010485_04296;product=lysine decarboxylation/transport transcriptional activator CadC;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0003677,GO:0005829,GO:0005886,GO:0006355,GO:0032993,GO:0042803,GO:0045893;gene=cadC;Parent=GCA000010485_04296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001187173,RefSeq:WP_001187191.1,SO:0001217,UniParc:UPI0000E4524C,UniRef:UniRef100_E2QK25,UniRef:UniRef50_P23890,UniRef:UniRef90_P23890
contig_1	tRNAscan-SE	gene	4394351	4394426	.	-	.	ID=GCA000010485_04297_gene;locus_tag=GCA000010485_04297;gene=trnF
contig_1	tRNAscan-SE	tRNA	4394351	4394426	.	-	.	ID=GCA000010485_04297;Name=tRNA-Phe(gaa);locus_tag=GCA000010485_04297;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000010485_04297_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	Pyrodigal	gene	4394533	4395108	.	-	.	ID=GCA000010485_04298_gene;locus_tag=GCA000010485_04298;gene=yjdC
contig_1	Pyrodigal	CDS	4394533	4395108	.	-	0	ID=GCA000010485_04298;Name=transcriptional regulator;locus_tag=GCA000010485_04298;product=transcriptional regulator;Dbxref=GO:0003677,GO:0006355;gene=yjdC;Parent=GCA000010485_04298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001188520.1,SO:0001217,UniParc:UPI000013B544,UniRef:UniRef100_P0ACU7,UniRef:UniRef50_P0ACU7,UniRef:UniRef90_P0ACU7
contig_1	Pyrodigal	gene	4395145	4396842	.	-	.	ID=GCA000010485_04299_gene;locus_tag=GCA000010485_04299;gene=dsbD
contig_1	Pyrodigal	CDS	4395145	4396842	.	-	0	ID=GCA000010485_04299;Name=protein-disulfide reductase DsbD;locus_tag=GCA000010485_04299;product=protein-disulfide reductase DsbD;Dbxref=GO:0005886,GO:0009055,GO:0017004,GO:0045454,GO:0047134;gene=dsbD;Parent=GCA000010485_04299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000068922,COG:COG4232,COG:O,KEGG:K04084,RefSeq:WP_000068939.1,SO:0001217,UniParc:UPI0001C22FC2,UniRef:UniRef100_A0A3K0JQM5,UniRef:UniRef50_P36655,UniRef:UniRef90_P36655;ec_number=1.8.1.8
contig_1	Pyrodigal	gene	4396818	4397156	.	-	.	ID=GCA000010485_04300_gene;locus_tag=GCA000010485_04300;gene=cutA
contig_1	Pyrodigal	CDS	4396818	4397156	.	-	0	ID=GCA000010485_04300;Name=divalent cation tolerance protein CutA;locus_tag=GCA000010485_04300;product=divalent cation tolerance protein CutA;Dbxref=GO:0005507,GO:0005737,GO:0010038;gene=cutA;Parent=GCA000010485_04300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1324,COG:P,RefSeq:WP_000883409.1,SO:0001217,UniParc:UPI000018FB82,UniRef:UniRef100_B7MKU2,UniRef:UniRef50_P69488,UniRef:UniRef90_P69488
contig_1	Pyrodigal	gene	4397272	4398573	.	-	.	ID=GCA000010485_04301_gene;locus_tag=GCA000010485_04301;gene=dcuA
contig_1	Pyrodigal	CDS	4397272	4398573	.	-	0	ID=GCA000010485_04301;Name=anaerobic C4-dicarboxylate transporter DcuA;locus_tag=GCA000010485_04301;product=anaerobic C4-dicarboxylate transporter DcuA;Dbxref=GO:0005886,GO:0015297,GO:0015556;gene=dcuA;Parent=GCA000010485_04301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000961959,COG:COG2704,COG:G,RefSeq:WP_000961959.1,SO:0001217,UniParc:UPI0000129038,UniRef:UniRef100_P0ABN5,UniRef:UniRef50_P0ABN5,UniRef:UniRef90_P0ABN5
contig_1	Pyrodigal	gene	4398691	4400127	.	-	.	ID=GCA000010485_04302_gene;locus_tag=GCA000010485_04302;gene=aspA
contig_1	Pyrodigal	CDS	4398691	4400127	.	-	0	ID=GCA000010485_04302;Name=aspartate ammonia-lyase;locus_tag=GCA000010485_04302;product=aspartate ammonia-lyase;Dbxref=GO:0005829,GO:0006099,GO:0006520,GO:0006531,GO:0006533,GO:0006538,GO:0008797,GO:0016020,GO:0019740,GO:0042802,GO:0051289;gene=aspA;Parent=GCA000010485_04302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1027,COG:E,KEGG:K01744,RefSeq:WP_000069437.1,SO:0001217,UniParc:UPI0000112029,UniRef:UniRef100_P0AC38,UniRef:UniRef50_P0AC38,UniRef:UniRef90_P0AC38;ec_number=4.3.1.1
contig_1	Pyrodigal	gene	4400464	4400940	.	+	.	ID=GCA000010485_04303_gene;locus_tag=GCA000010485_04303;gene=fxsA
contig_1	Pyrodigal	CDS	4400464	4400940	.	+	0	ID=GCA000010485_04303;Name=UPF0716 protein FxsA;locus_tag=GCA000010485_04303;product=UPF0716 protein FxsA;Dbxref=GO:0005886,GO:0016020;gene=fxsA;Parent=GCA000010485_04303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3030,COG:R,KEGG:K07113,RefSeq:WP_001267445.1,SO:0001217,UniParc:UPI000000E8F4,UniRef:UniRef100_C3SGG2,UniRef:UniRef50_P37147,UniRef:UniRef90_P37147
contig_1	Pyrodigal	gene	4400956	4402212	.	-	.	ID=GCA000010485_04304_gene;locus_tag=GCA000010485_04304;gene=yjeH
contig_1	Pyrodigal	CDS	4400956	4402212	.	-	0	ID=GCA000010485_04304;Name=L-methionine/branched-chain amino acid transporter;locus_tag=GCA000010485_04304;product=L-methionine/branched-chain amino acid transporter;Dbxref=GO:0000102,GO:0005294,GO:0005886,GO:0015297,GO:0015820,GO:0015821,GO:0016020,GO:0022857,GO:0055085,GO:0071230,GO:1903714,GO:1903785;gene=yjeH;Parent=GCA000010485_04304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,KEGG:K16263,RefSeq:WP_001545727.1,SO:0001217,UniParc:UPI0001C22FC3,UniRef:UniRef100_A0A7I0KV47,UniRef:UniRef50_P39277,UniRef:UniRef90_P39277
contig_1	Pyrodigal	gene	4402488	4402781	.	+	.	ID=GCA000010485_04305_gene;locus_tag=GCA000010485_04305;gene=groES
contig_1	Pyrodigal	CDS	4402488	4402781	.	+	0	ID=GCA000010485_04305;Name=Co-chaperonin GroES;locus_tag=GCA000010485_04305;product=Co-chaperonin GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000010485_04305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_001026276.1,SO:0001217,UniParc:UPI0000000ED3,UniRef:UniRef100_P0A6F9,UniRef:UniRef50_P0A6F9,UniRef:UniRef90_P0A6F9
contig_1	Pyrodigal	gene	4402825	4404471	.	+	.	ID=GCA000010485_04306_gene;locus_tag=GCA000010485_04306;gene=groL
contig_1	Pyrodigal	CDS	4402825	4404471	.	+	0	ID=GCA000010485_04306;Name=chaperonin GroEL;locus_tag=GCA000010485_04306;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA000010485_04306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_000729117.1,SO:0001217,UniParc:UPI0000000ED4,UniRef:UniRef100_P0A6F5,UniRef:UniRef50_P0A6F5,UniRef:UniRef90_P0A6F5;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	4404609	4404962	.	+	.	ID=GCA000010485_04307_gene;locus_tag=GCA000010485_04307;gene=yjeI
contig_1	Pyrodigal	CDS	4404609	4404962	.	+	0	ID=GCA000010485_04307;Name=putative protein YjeI;locus_tag=GCA000010485_04307;product=putative protein YjeI;Dbxref=GO:0006974;gene=yjeI;Parent=GCA000010485_04307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000558209.1,SO:0001217,UniParc:UPI000013B554,UniRef:UniRef100_P0AF70,UniRef:UniRef50_P0AF70,UniRef:UniRef90_P0AF70
contig_1	Pyrodigal	gene	4405012	4405881	.	-	.	ID=GCA000010485_04308_gene;locus_tag=GCA000010485_04308;gene=yjeJ
contig_1	Pyrodigal	CDS	4405012	4405881	.	-	0	ID=GCA000010485_04308;Name=putative protein YjeJ;locus_tag=GCA000010485_04308;product=putative protein YjeJ;gene=yjeJ;Parent=GCA000010485_04308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001008032.1,SO:0001217,UniParc:UPI0001C22EE4,UniRef:UniRef100_A0A066SYE2,UniRef:UniRef50_P39279,UniRef:UniRef90_P39279
contig_1	Pyrodigal	gene	4406116	4407144	.	-	.	ID=GCA000010485_04309_gene;locus_tag=GCA000010485_04309;gene=epmB
contig_1	Pyrodigal	CDS	4406116	4407144	.	-	0	ID=GCA000010485_04309;Name=EF-P beta-lysylation protein EpmB;locus_tag=GCA000010485_04309;product=EF-P beta-lysylation protein EpmB;Dbxref=GO:0016869,GO:0046872,GO:0051539;gene=epmB;Parent=GCA000010485_04309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1509,COG:E,RefSeq:WP_000940543.1,SO:0001217,UniParc:UPI0001C22EE5,UniRef:UniRef100_A0A061YBN1,UniRef:UniRef50_P39280,UniRef:UniRef90_P39280;ec_number=5.4.3.-
contig_1	Pyrodigal	gene	4407186	4407752	.	+	.	ID=GCA000010485_04310_gene;locus_tag=GCA000010485_04310
contig_1	Pyrodigal	CDS	4407186	4407752	.	+	0	ID=GCA000010485_04310;Name=Elongation factor P;locus_tag=GCA000010485_04310;product=Elongation factor P;Parent=GCA000010485_04310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000257278.1,SO:0001217,UniParc:UPI000003762D,UniRef:UniRef100_P0A6N4,UniRef:UniRef90_P0A6N4
contig_1	Pyrodigal	gene	4408040	4408186	.	+	.	ID=GCA000010485_04311_gene;locus_tag=GCA000010485_04311;gene=ecnB
contig_1	Pyrodigal	CDS	4408040	4408186	.	+	0	ID=GCA000010485_04311;Name=lipoprotein toxin entericidin B;locus_tag=GCA000010485_04311;product=lipoprotein toxin entericidin B;Dbxref=GO:0005886,GO:0009636;gene=ecnB;Parent=GCA000010485_04311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5510,COG:V,RefSeq:WP_000239596.1,SO:0001217,UniParc:UPI0000129B85,UniRef:UniRef100_P0ADB7,UniRef:UniRef50_P0ADB7,UniRef:UniRef90_P0ADB7
contig_1	Infernal	regulatory_region	4408298	4408344	9.1e-07	+	.	ID=EFPPCJGBKI_329;Name=Guanidine-II riboswitch aptamer (mini-ykkC);product=Guanidine-II riboswitch aptamer (mini-ykkC);Dbxref=RFAM:RF01068;inference=profile:Rfam:RF01068;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	4408362	4408679	.	+	.	ID=GCA000010485_04312_gene;locus_tag=GCA000010485_04312;gene=sugE
contig_1	Pyrodigal	CDS	4408362	4408679	.	+	0	ID=GCA000010485_04312;Name=quaternary ammonium compound efflux SMR transporter SugE;locus_tag=GCA000010485_04312;product=quaternary ammonium compound efflux SMR transporter SugE;Dbxref=GO:0005886,GO:0006811,GO:0016020,GO:0022857;gene=sugE;Parent=GCA000010485_04312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000118520,COG:COG2076,COG:V,KEGG:K11741,RefSeq:WP_000118482.1,SO:0001217,UniParc:UPI00001361CF,UniRef:UniRef100_P69937,UniRef:UniRef50_P69937,UniRef:UniRef90_P69937
contig_1	Pyrodigal	gene	4408676	4409209	.	-	.	ID=GCA000010485_04313_gene;locus_tag=GCA000010485_04313;gene=blc
contig_1	Pyrodigal	CDS	4408676	4409209	.	-	0	ID=GCA000010485_04313;Name=lipocalin Blc;locus_tag=GCA000010485_04313;product=lipocalin Blc;gene=blc;Parent=GCA000010485_04313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001238378,KEGG:K03098,RefSeq:WP_001238369.1,SO:0001217,UniParc:UPI00000E4AB2,UniRef:UniRef100_E2QK88,UniRef:UniRef50_E2QK88,UniRef:UniRef90_E2QK88
contig_1	Pyrodigal	gene	4409298	4410302	.	-	.	ID=GCA000010485_04314_gene;locus_tag=GCA000010485_04314;gene=blaEC
contig_1	Pyrodigal	CDS	4409298	4410302	.	-	0	ID=GCA000010485_04314;Name=BlaEC family class C beta-lactamase;locus_tag=GCA000010485_04314;product=BlaEC family class C beta-lactamase;Dbxref=GO:0008800,GO:0030288;gene=blaEC;Parent=GCA000010485_04314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AAZ85965.1,SO:0001217,UniRef:UniRef50_A0A376FKW6,UniRef:UniRef90_A0A377AS65;ec_number=3.5.2.6
contig_1	Pyrodigal	gene	4410494	4410853	.	-	.	ID=GCA000010485_04315_gene;locus_tag=GCA000010485_04315;gene=frdD
contig_1	Pyrodigal	CDS	4410494	4410853	.	-	0	ID=GCA000010485_04315;Name=fumarate reductase subunit FrdD;locus_tag=GCA000010485_04315;product=fumarate reductase subunit FrdD;Dbxref=GO:0000104,GO:0005886,GO:0006106;gene=frdD;Parent=GCA000010485_04315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3080,KEGG:K00247,RefSeq:WP_000609663.1,SO:0001217,UniParc:UPI0000112150,UniRef:UniRef100_P0A8Q3,UniRef:UniRef50_P0A8Q3,UniRef:UniRef90_P0A8Q3;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	4410864	4411259	.	-	.	ID=GCA000010485_04316_gene;locus_tag=GCA000010485_04316
contig_1	Pyrodigal	CDS	4410864	4411259	.	-	0	ID=GCA000010485_04316;Name=Fumarate reductase subunit C;locus_tag=GCA000010485_04316;product=Fumarate reductase subunit C;Parent=GCA000010485_04316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000208757.1,SO:0001217,UniParc:UPI000012ABE8,UniRef:UniRef100_P0A8Q0,UniRef:UniRef90_P0A8Q0
contig_1	Pyrodigal	gene	4411270	4412004	.	-	.	ID=GCA000010485_04317_gene;locus_tag=GCA000010485_04317;gene=frdB
contig_1	Pyrodigal	CDS	4411270	4412004	.	-	0	ID=GCA000010485_04317;Name=fumarate reductase iron-sulfur protein;locus_tag=GCA000010485_04317;product=fumarate reductase iron-sulfur protein;Dbxref=GO:0005829,GO:0005886,GO:0006099,GO:0006113,GO:0008177,GO:0009055,GO:0009061,GO:0016020,GO:0016491,GO:0019645,GO:0044780,GO:0045283,GO:0046872,GO:0051536,GO:0051537,GO:0051538,GO:0051539;gene=frdB;Parent=GCA000010485_04317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000829498,COG:C,COG:COG0479,RefSeq:WP_000829498.1,SO:0001217,UniParc:UPI0000165554,UniRef:UniRef100_P0AC47,UniRef:UniRef50_P0AC47,UniRef:UniRef90_P0AC47;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	4411997	4413805	.	-	.	ID=GCA000010485_04318_gene;locus_tag=GCA000010485_04318;gene=frdA
contig_1	Pyrodigal	CDS	4411997	4413805	.	-	0	ID=GCA000010485_04318;Name=fumarate reductase (quinol) flavoprotein subunit;locus_tag=GCA000010485_04318;product=fumarate reductase (quinol) flavoprotein subunit;Dbxref=GO:0000104,GO:0005829,GO:0005886,GO:0006113,GO:0006974,GO:0008177,GO:0009055,GO:0009061,GO:0016020,GO:0016491,GO:0019645,GO:0022900,GO:0044780,GO:0045283,GO:0050660,GO:0071949;gene=frdA;Parent=GCA000010485_04318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,KEGG:K00244,RefSeq:WP_001192980.1,SO:0001217,UniParc:UPI00000DF400,UniRef:UniRef100_E2QK93,UniRef:UniRef50_P00363,UniRef:UniRef90_P00363;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	4414130	4415107	.	+	.	ID=GCA000010485_04319_gene;locus_tag=GCA000010485_04319;gene=epmA
contig_1	Pyrodigal	CDS	4414130	4415107	.	+	0	ID=GCA000010485_04319;Name=elongation factor P--(R)-beta-lysine ligase;locus_tag=GCA000010485_04319;product=elongation factor P--(R)-beta-lysine ligase;Dbxref=GO:0000049,GO:0004812,GO:0004824,GO:0005524,GO:0005829,GO:0006418,GO:0006430,GO:0016880;gene=epmA;Parent=GCA000010485_04319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2269,COG:J,KEGG:K04568,RefSeq:WP_000004771.1,SO:0001217,UniParc:UPI000013650F,UniRef:UniRef100_P0A8N7,UniRef:UniRef50_P0A8N7,UniRef:UniRef90_P0A8N7;ec_number=6.3.1.-
contig_1	Pyrodigal	gene	4415371	4416828	.	+	.	ID=GCA000010485_04320_gene;locus_tag=GCA000010485_04320;gene=yjeM
contig_1	Pyrodigal	CDS	4415371	4416828	.	+	0	ID=GCA000010485_04320;Name=glutamate/gamma-aminobutyrate family transporter YjeM;locus_tag=GCA000010485_04320;product=glutamate/gamma-aminobutyrate family transporter YjeM;Dbxref=GO:0022857;gene=yjeM;Parent=GCA000010485_04320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P39282,UniRef:UniRef90_A0A0H9FWC2
contig_1	Pyrodigal	gene	4416938	4417240	.	+	.	ID=GCA000010485_04321_gene;locus_tag=GCA000010485_04321;gene=yjeO
contig_1	Pyrodigal	CDS	4416938	4417240	.	+	0	ID=GCA000010485_04321;Name=Inner membrane protein YjeO;locus_tag=GCA000010485_04321;product=Inner membrane protein YjeO;Dbxref=GO:0005886;gene=yjeO;Parent=GCA000010485_04321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A25D50,UniRef:UniRef100_A0A0A2RE83,UniRef:UniRef50_P39284,UniRef:UniRef90_P39284
contig_1	Pyrodigal	gene	4417271	4420594	.	-	.	ID=GCA000010485_04322_gene;locus_tag=GCA000010485_04322;gene=mscM
contig_1	Pyrodigal	CDS	4417271	4420594	.	-	0	ID=GCA000010485_04322;Name=miniconductance mechanosensitive channel MscM;locus_tag=GCA000010485_04322;product=miniconductance mechanosensitive channel MscM;Dbxref=GO:0005886,GO:0008381,GO:0016020,GO:0055085,GO:0071470;gene=mscM;Parent=GCA000010485_04322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3264,COG:M,RefSeq:WP_001236825.1,SO:0001217,UniParc:UPI0001C22EE8,UniRef:UniRef100_A0A061KFI4,UniRef:UniRef50_P39285,UniRef:UniRef90_P39285
contig_1	Pyrodigal	gene	4420616	4421584	.	-	.	ID=GCA000010485_04323_gene;locus_tag=GCA000010485_04323;gene=asd
contig_1	Pyrodigal	CDS	4420616	4421584	.	-	0	ID=GCA000010485_04323;Name=archaetidylserine decarboxylase;locus_tag=GCA000010485_04323;product=archaetidylserine decarboxylase;Dbxref=GO:0004609,GO:0005886,GO:0006646,GO:0008654;gene=asd;Parent=GCA000010485_04323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0688,COG:I,KEGG:K01613,RefSeq:WP_000934914.1,SO:0001217,UniParc:UPI0001C22EE9,UniRef:UniRef100_A0A066SUD8,UniRef:UniRef50_P0A8K1,UniRef:UniRef90_P0A8K1;ec_number=4.1.1.65
contig_1	Pyrodigal	gene	4421681	4422733	.	-	.	ID=GCA000010485_04324_gene;locus_tag=GCA000010485_04324;gene=rsgA
contig_1	Pyrodigal	CDS	4421681	4422733	.	-	0	ID=GCA000010485_04324;Name=small ribosomal subunit biogenesis GTPase RsgA;locus_tag=GCA000010485_04324;product=small ribosomal subunit biogenesis GTPase RsgA;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0019843,GO:0042274,GO:0046872;gene=rsgA;Parent=GCA000010485_04324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,RefSeq:WP_000041976.1,SO:0001217,UniParc:UPI0000219471,UniRef:UniRef100_B7UPY1,UniRef:UniRef50_P39286,UniRef:UniRef90_P39286;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	4422828	4423373	.	+	.	ID=GCA000010485_04325_gene;locus_tag=GCA000010485_04325;gene=orn
contig_1	Pyrodigal	CDS	4422828	4423373	.	+	0	ID=GCA000010485_04325;Name=oligoribonuclease;locus_tag=GCA000010485_04325;product=oligoribonuclease;Dbxref=GO:0000175,GO:0003676,GO:0005829,GO:0006401,GO:0008310,GO:0034611,GO:0046872;gene=orn;Parent=GCA000010485_04325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:A,COG:COG1949,KEGG:K13288,RefSeq:WP_001295188.1,SO:0001217,UniParc:UPI00001B5148,UniRef:UniRef100_P0A784,UniRef:UniRef50_P0A784,UniRef:UniRef90_P0A784;ec_number=3.1.15.-
contig_1	tRNAscan-SE	gene	4423584	4423659	.	+	.	ID=GCA000010485_04326_gene;locus_tag=GCA000010485_04326;gene=trnG
contig_1	tRNAscan-SE	tRNA	4423584	4423659	.	+	.	ID=GCA000010485_04326;Name=tRNA-Gly(gcc);locus_tag=GCA000010485_04326;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000010485_04326_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	4423696	4423771	.	+	.	ID=GCA000010485_04327_gene;locus_tag=GCA000010485_04327;gene=trnG
contig_1	tRNAscan-SE	tRNA	4423696	4423771	.	+	.	ID=GCA000010485_04327;Name=tRNA-Gly(gcc);locus_tag=GCA000010485_04327;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000010485_04327_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	4423807	4423882	.	+	.	ID=GCA000010485_04328_gene;locus_tag=GCA000010485_04328;gene=trnG
contig_1	tRNAscan-SE	tRNA	4423807	4423882	.	+	.	ID=GCA000010485_04328;Name=tRNA-Gly(gcc);locus_tag=GCA000010485_04328;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000010485_04328_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	4424152	4425291	.	-	.	ID=GCA000010485_04329_gene;locus_tag=GCA000010485_04329;gene=queG
contig_1	Pyrodigal	CDS	4424152	4425291	.	-	0	ID=GCA000010485_04329;Name=tRNA epoxyqueuosine(34) reductase QueG;locus_tag=GCA000010485_04329;product=tRNA epoxyqueuosine(34) reductase QueG;Dbxref=GO:0005737,GO:0006400,GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queG;Parent=GCA000010485_04329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1600,COG:J,KEGG:K18979,RefSeq:WP_001294229.1,SO:0001217,UniParc:UPI0001C22EEA,UniRef:UniRef100_A0A061YFW3,UniRef:UniRef50_P39288,UniRef:UniRef90_P39288;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	4425305	4426837	.	+	.	ID=GCA000010485_04330_gene;locus_tag=GCA000010485_04330;gene=nnr
contig_1	Pyrodigal	CDS	4425305	4426837	.	+	0	ID=GCA000010485_04330;Name=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;locus_tag=GCA000010485_04330;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;Dbxref=GO:0005524,GO:0046496,GO:0046872,GO:0052855,GO:0052856,GO:0110051;gene=nnr;Parent=GCA000010485_04330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23997,SO:0001217,UniRef:UniRef50_P31806,UniRef:UniRef90_P31806;ec_number=5.1.99.6
contig_1	Pyrodigal	gene	4426809	4427270	.	+	.	ID=GCA000010485_04331_gene;locus_tag=GCA000010485_04331;gene=tsaE
contig_1	Pyrodigal	CDS	4426809	4427270	.	+	0	ID=GCA000010485_04331;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000010485_04331;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949,GO:0005524,GO:0005737,GO:0046872;gene=tsaE;Parent=GCA000010485_04331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,RefSeq:WP_000981977.1,SO:0001217,UniParc:UPI0000034198,UniRef:UniRef100_P0AF67,UniRef:UniRef50_P0AF67,UniRef:UniRef90_P0AF67;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	4427289	4428620	.	+	.	ID=GCA000010485_04332_gene;locus_tag=GCA000010485_04332;gene=amiB
contig_1	Pyrodigal	CDS	4427289	4428620	.	+	0	ID=GCA000010485_04332;Name=N-acetylmuramoyl-L-alanine amidase AmiB;locus_tag=GCA000010485_04332;product=N-acetylmuramoyl-L-alanine amidase AmiB;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0043093,GO:0051301,GO:0071555;gene=amiB;Parent=GCA000010485_04332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0860,COG:M,RefSeq:WP_000990282.1,SO:0001217,UniParc:UPI0001C22EEC,UniRef:UniRef100_A0A066SQH1,UniRef:UniRef50_P26365,UniRef:UniRef90_P26365;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	4428630	4430477	.	+	.	ID=GCA000010485_04333_gene;locus_tag=GCA000010485_04333;gene=mutL
contig_1	Pyrodigal	CDS	4428630	4430477	.	+	0	ID=GCA000010485_04333;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA000010485_04333;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300,GO:0140664;gene=mutL;Parent=GCA000010485_04333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_001296676.1,SO:0001217,UniParc:UPI0001C22EED,UniRef:UniRef100_A0A066SQR0,UniRef:UniRef50_P23367,UniRef:UniRef90_P23367
contig_1	Pyrodigal	gene	4430470	4431420	.	+	.	ID=GCA000010485_04334_gene;locus_tag=GCA000010485_04334;gene=miaA
contig_1	Pyrodigal	CDS	4430470	4431420	.	+	0	ID=GCA000010485_04334;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000010485_04334;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000010485_04334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_001280359.1,SO:0001217,UniParc:UPI0000D50E95,UniRef:UniRef100_B7MKX5,UniRef:UniRef50_P16384,UniRef:UniRef90_P16384;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	4431506	4431814	.	+	.	ID=GCA000010485_04335_gene;locus_tag=GCA000010485_04335;gene=hfq
contig_1	Pyrodigal	CDS	4431506	4431814	.	+	0	ID=GCA000010485_04335;Name=RNA chaperone Hfq;locus_tag=GCA000010485_04335;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0005829,GO:0006355,GO:0043487,GO:0045974;gene=hfq;Parent=GCA000010485_04335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1923,COG:T,RefSeq:WP_001051883.1,SO:0001217,UniParc:UPI00001562A2,UniRef:UniRef100_P0A6X3,UniRef:UniRef50_P0A6X3,UniRef:UniRef90_P0A6X3
contig_1	Pyrodigal	gene	4431890	4433170	.	+	.	ID=GCA000010485_04336_gene;locus_tag=GCA000010485_04336;gene=hflX
contig_1	Pyrodigal	CDS	4431890	4433170	.	+	0	ID=GCA000010485_04336;Name=ribosome rescue GTPase HflX;locus_tag=GCA000010485_04336;product=ribosome rescue GTPase HflX;Dbxref=GO:0003924,GO:0005524,GO:0005525,GO:0005737,GO:0005829,GO:0009408,GO:0016887,GO:0019843,GO:0032790,GO:0043022,GO:0043023,GO:0046872,GO:0072344,GO:0097216;gene=hflX;Parent=GCA000010485_04336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2262,COG:J,RefSeq:WP_000460357.1,SO:0001217,UniParc:UPI00000DF408,UniRef:UniRef100_E2QKA7,UniRef:UniRef50_P25519,UniRef:UniRef90_P25519;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	4433256	4434515	.	+	.	ID=GCA000010485_04337_gene;locus_tag=GCA000010485_04337;gene=hflK
contig_1	Pyrodigal	CDS	4433256	4434515	.	+	0	ID=GCA000010485_04337;Name=FtsH protease activity modulator HflK;locus_tag=GCA000010485_04337;product=FtsH protease activity modulator HflK;Dbxref=GO:0005829,GO:0005886,GO:0009408,GO:0016020,GO:0098796,GO:0098797;gene=hflK;Parent=GCA000010485_04337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_000312479.1,SO:0001217,UniParc:UPI00000DF409,UniRef:UniRef100_A0A067HAF5,UniRef:UniRef50_P0ABC7,UniRef:UniRef90_P0ABC7;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	4434518	4435522	.	+	.	ID=GCA000010485_04338_gene;locus_tag=GCA000010485_04338;gene=hflC
contig_1	Pyrodigal	CDS	4434518	4435522	.	+	0	ID=GCA000010485_04338;Name=protease modulator HflC;locus_tag=GCA000010485_04338;product=protease modulator HflC;Dbxref=GO:0005886;gene=hflC;Parent=GCA000010485_04338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_001232412.1,SO:0001217,UniParc:UPI000012C689,UniRef:UniRef100_P0ABC3,UniRef:UniRef50_P0ABC3,UniRef:UniRef90_P0ABC3;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	4435604	4435801	.	+	.	ID=GCA000010485_04339_gene;locus_tag=GCA000010485_04339;gene=yjeT
contig_1	Pyrodigal	CDS	4435604	4435801	.	+	0	ID=GCA000010485_04339;Name=putative protein YjeT;locus_tag=GCA000010485_04339;product=putative protein YjeT;Dbxref=GO:0005886;gene=yjeT;Parent=GCA000010485_04339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3242,COG:S,KEGG:K09937,RefSeq:WP_001089295.1,SO:0001217,UniParc:UPI000013B55F,UniRef:UniRef100_P0AF73,UniRef:UniRef50_P0AF73,UniRef:UniRef90_P0AF73
contig_1	Pyrodigal	gene	4435905	4437203	.	+	.	ID=GCA000010485_04340_gene;locus_tag=GCA000010485_04340;gene=purA
contig_1	Pyrodigal	CDS	4435905	4437203	.	+	0	ID=GCA000010485_04340;Name=adenylosuccinate synthase;locus_tag=GCA000010485_04340;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040;gene=purA;Parent=GCA000010485_04340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_000527954.1,SO:0001217,UniParc:UPI0001C22EEE,UniRef:UniRef100_A0A061Y7T9,UniRef:UniRef50_P0A7D4,UniRef:UniRef90_P0A7D4;ec_number=6.3.4.4
contig_1	Pyrodigal	gene	4437408	4437833	.	+	.	ID=GCA000010485_04341_gene;locus_tag=GCA000010485_04341;gene=nsrR
contig_1	Pyrodigal	CDS	4437408	4437833	.	+	0	ID=GCA000010485_04341;Name=nitric oxide-sensing transcriptional repressor NsrR;locus_tag=GCA000010485_04341;product=nitric oxide-sensing transcriptional repressor NsrR;Dbxref=GO:0003690,GO:0003700,GO:0005506,GO:0005829,GO:0045892,GO:0051537;gene=nsrR;Parent=GCA000010485_04341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,KEGG:K13771,RefSeq:WP_001177639.1,SO:0001217,UniParc:UPI000013B551,UniRef:UniRef100_P0AF63,UniRef:UniRef50_P0AF63,UniRef:UniRef90_P0AF63
contig_1	Pyrodigal	gene	4437872	4440313	.	+	.	ID=GCA000010485_04342_gene;locus_tag=GCA000010485_04342;gene=rnr
contig_1	Pyrodigal	CDS	4437872	4440313	.	+	0	ID=GCA000010485_04342;Name=ribonuclease R;locus_tag=GCA000010485_04342;product=ribonuclease R;Dbxref=GO:0003723,GO:0004540,GO:0005829,GO:0006402,GO:0008859,GO:0016070;gene=rnr;Parent=GCA000010485_04342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_000076322.1,SO:0001217,UniParc:UPI0001C22EEF,UniRef:UniRef100_A0A066SQG0,UniRef:UniRef50_P21499,UniRef:UniRef90_P21499;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	4440404	4441135	.	+	.	ID=GCA000010485_04343_gene;locus_tag=GCA000010485_04343;gene=rlmB
contig_1	Pyrodigal	CDS	4440404	4441135	.	+	0	ID=GCA000010485_04343;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000010485_04343;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0070039;gene=rlmB;Parent=GCA000010485_04343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_001293282.1,SO:0001217,UniParc:UPI000013B567,UniRef:UniRef100_P63177,UniRef:UniRef50_P63177,UniRef:UniRef90_P63177;ec_number=2.1.1.185
contig_1	Pyrodigal	gene	4441262	4441663	.	+	.	ID=GCA000010485_04344_gene;locus_tag=GCA000010485_04344;gene=yjfI
contig_1	Pyrodigal	CDS	4441262	4441663	.	+	0	ID=GCA000010485_04344;Name=putative protein YjfI;locus_tag=GCA000010485_04344;product=putative protein YjfI;gene=yjfI;Parent=GCA000010485_04344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220124.1,SO:0001217,UniParc:UPI0001C22F44,UniRef:UniRef100_A0A066SZ49,UniRef:UniRef50_P0AF76,UniRef:UniRef90_P0AF76
contig_1	Pyrodigal	gene	4441682	4442380	.	+	.	ID=GCA000010485_04345_gene;locus_tag=GCA000010485_04345;gene=yjfJ
contig_1	Pyrodigal	CDS	4441682	4442380	.	+	0	ID=GCA000010485_04345;Name=putative protein YjfJ;locus_tag=GCA000010485_04345;product=putative protein YjfJ;Dbxref=GO:0042802;gene=yjfJ;Parent=GCA000010485_04345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000511955.1,SO:0001217,UniParc:UPI000013B56A,UniRef:UniRef100_P0AF78,UniRef:UniRef50_P0AF78,UniRef:UniRef90_P0AF78
contig_1	Pyrodigal	gene	4442430	4443089	.	+	.	ID=GCA000010485_04346_gene;locus_tag=GCA000010485_04346;gene=yjfK
contig_1	Pyrodigal	CDS	4442430	4443089	.	+	0	ID=GCA000010485_04346;Name=putative protein YjfK;locus_tag=GCA000010485_04346;product=putative protein YjfK;gene=yjfK;Parent=GCA000010485_04346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000012575.1,SO:0001217,UniParc:UPI0001C22F45,UniRef:UniRef100_A0A066SUB9,UniRef:UniRef50_P39293,UniRef:UniRef90_P39293
contig_1	Pyrodigal	gene	4443107	4443505	.	+	.	ID=GCA000010485_04347_gene;locus_tag=GCA000010485_04347;gene=yjfL
contig_1	Pyrodigal	CDS	4443107	4443505	.	+	0	ID=GCA000010485_04347;Name=UPF0719 inner membrane protein YjfL;locus_tag=GCA000010485_04347;product=UPF0719 inner membrane protein YjfL;Dbxref=GO:0005886;gene=yjfL;Parent=GCA000010485_04347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08989,RefSeq:WP_000547753.1,SO:0001217,UniParc:UPI0000D50E9A,UniRef:UniRef100_E2QKB8,UniRef:UniRef50_P0AF80,UniRef:UniRef90_P0AF80
contig_1	Pyrodigal	gene	4443515	4444153	.	+	.	ID=GCA000010485_04348_gene;locus_tag=GCA000010485_04348;gene=yjfM
contig_1	Pyrodigal	CDS	4443515	4444153	.	+	0	ID=GCA000010485_04348;Name=putative protein YjfM;locus_tag=GCA000010485_04348;product=putative protein YjfM;gene=yjfM;Parent=GCA000010485_04348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5463,COG:S,RefSeq:WP_000101639.1,SO:0001217,UniParc:UPI0000DAD13D,UniRef:UniRef100_E2QKB9,UniRef:UniRef50_P39295,UniRef:UniRef90_P39295
contig_1	Pyrodigal	gene	4444156	4445319	.	+	.	ID=GCA000010485_04349_gene;locus_tag=GCA000010485_04349;gene=yjfC
contig_1	Pyrodigal	CDS	4444156	4445319	.	+	0	ID=GCA000010485_04349;Name=Putative acid--amine ligase YjfC;locus_tag=GCA000010485_04349;product=Putative acid--amine ligase YjfC;Dbxref=GO:0005524,GO:0016874,GO:0046872;gene=yjfC;Parent=GCA000010485_04349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0754,COG:E,RefSeq:WP_000944012.1,SO:0001217,UniParc:UPI0000E45280,UniRef:UniRef100_A0A066SZ43,UniRef:UniRef50_P33222,UniRef:UniRef90_P33222;ec_number=6.3.1.-
contig_1	Pyrodigal	gene	4445403	4447028	.	+	.	ID=GCA000010485_04350_gene;locus_tag=GCA000010485_04350;gene=caiA
contig_1	Pyrodigal	CDS	4445403	4447028	.	+	0	ID=GCA000010485_04350;Name=isovaleryl-CoA dehydrogenase;locus_tag=GCA000010485_04350;product=isovaleryl-CoA dehydrogenase;Dbxref=GO:0003995;gene=caiA;Parent=GCA000010485_04350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,KEGG:K09456,RefSeq:WP_001296678.1,SO:0001217,UniParc:UPI0001C22F46,UniRef:UniRef100_A0A066SYB1,UniRef:UniRef50_P33224,UniRef:UniRef90_W8SXK6;ec_number=1.3.8.4
contig_1	Pyrodigal	gene	4447145	4447420	.	-	.	ID=GCA000010485_04351_gene;locus_tag=GCA000010485_04351;gene=yjfN
contig_1	Pyrodigal	CDS	4447145	4447420	.	-	0	ID=GCA000010485_04351;Name=protease activator YjfN;locus_tag=GCA000010485_04351;product=protease activator YjfN;Dbxref=GO:0042597;gene=yjfN;Parent=GCA000010485_04351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000811566,RefSeq:WP_000811566.1,SO:0001217,UniParc:UPI000013B56F,UniRef:UniRef100_P0AF82,UniRef:UniRef50_P0AF82,UniRef:UniRef90_P0AF82
contig_1	Pyrodigal	gene	4447569	4447898	.	-	.	ID=GCA000010485_04352_gene;locus_tag=GCA000010485_04352;gene=bsmA
contig_1	Pyrodigal	CDS	4447569	4447898	.	-	0	ID=GCA000010485_04352;Name=biofilm peroxide resistance protein BsmA;locus_tag=GCA000010485_04352;product=biofilm peroxide resistance protein BsmA;gene=bsmA;Parent=GCA000010485_04352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000254626.1,SO:0001217,UniParc:UPI0001E8ACD9,UniRef:UniRef100_A0A061YJK1,UniRef:UniRef50_P39297,UniRef:UniRef90_C3SFW2
contig_1	Pyrodigal	gene	4448080	4448829	.	+	.	ID=GCA000010485_04353_gene;locus_tag=GCA000010485_04353;gene=yjfP
contig_1	Pyrodigal	CDS	4448080	4448829	.	+	0	ID=GCA000010485_04353;Name=esterase;locus_tag=GCA000010485_04353;product=esterase;Dbxref=GO:0006508,GO:0008236,GO:0016787,GO:0034338,GO:0042803;gene=yjfP;Parent=GCA000010485_04353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1073,COG:T,RefSeq:WP_000569716.1,SO:0001217,UniParc:UPI0001C22F48,UniRef:UniRef100_A0A061YIH6,UniRef:UniRef50_P39298,UniRef:UniRef90_P39298;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	4448826	4449581	.	-	.	ID=GCA000010485_04354_gene;locus_tag=GCA000010485_04354;gene=ulaR
contig_1	Pyrodigal	CDS	4448826	4449581	.	-	0	ID=GCA000010485_04354;Name=HTH-type transcriptional regulator UlaR;locus_tag=GCA000010485_04354;product=HTH-type transcriptional regulator UlaR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0045892;gene=ulaR;Parent=GCA000010485_04354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K03477,RefSeq:WP_000133631.1,SO:0001217,UniParc:UPI000003EAD3,UniRef:UniRef100_P0A9W0,UniRef:UniRef50_P0A9W0,UniRef:UniRef90_P0A9W0
contig_1	Pyrodigal	gene	4449689	4450753	.	-	.	ID=GCA000010485_04355_gene;locus_tag=GCA000010485_04355;gene=ulaG
contig_1	Pyrodigal	CDS	4449689	4450753	.	-	0	ID=GCA000010485_04355;Name=L-ascorbate 6-phosphate lactonase;locus_tag=GCA000010485_04355;product=L-ascorbate 6-phosphate lactonase;Dbxref=GO:0005737,GO:0019854,GO:0030145,GO:0035460;gene=ulaG;Parent=GCA000010485_04355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,KEGG:K03476,RefSeq:WP_001296680.1,SO:0001217,UniParc:UPI0001C22F49,UniRef:UniRef100_A0A066SYA8,UniRef:UniRef50_P39300,UniRef:UniRef90_P39300;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	4451108	4452505	.	+	.	ID=GCA000010485_04356_gene;locus_tag=GCA000010485_04356;gene=ulaA
contig_1	Pyrodigal	CDS	4451108	4452505	.	+	0	ID=GCA000010485_04356;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA000010485_04356;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0005886,GO:0009401;gene=ulaA;Parent=GCA000010485_04356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3037,COG:G,KEGG:K03475,RefSeq:WP_000404886.1,SO:0001217,UniParc:UPI00000DF417,UniRef:UniRef100_Q8FAJ3,UniRef:UniRef50_P39301,UniRef:UniRef90_P39301;ec_number=2.7.1.194
contig_1	Pyrodigal	gene	4452521	4452826	.	+	.	ID=GCA000010485_04357_gene;locus_tag=GCA000010485_04357;gene=ulaB
contig_1	Pyrodigal	CDS	4452521	4452826	.	+	0	ID=GCA000010485_04357;Name=PTS ascorbate transporter subunit IIB;locus_tag=GCA000010485_04357;product=PTS ascorbate transporter subunit IIB;Dbxref=GO:0005737,GO:0008982,GO:0009401,GO:0016301;gene=ulaB;Parent=GCA000010485_04357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000218362.1,SO:0001217,UniParc:UPI00001329E1,UniRef:UniRef100_P69822,UniRef:UniRef50_P69822,UniRef:UniRef90_P69822;ec_number=2.7.1.194
contig_1	Pyrodigal	gene	4452836	4453300	.	+	.	ID=GCA000010485_04358_gene;locus_tag=GCA000010485_04358;gene=ulaC
contig_1	Pyrodigal	CDS	4452836	4453300	.	+	0	ID=GCA000010485_04358;Name=PTS ascorbate transporter subunit IIA;locus_tag=GCA000010485_04358;product=PTS ascorbate transporter subunit IIA;Dbxref=GO:0005737,GO:0009401,GO:0016301;gene=ulaC;Parent=GCA000010485_04358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000776505.1,SO:0001217,UniParc:UPI00005AAC72,UniRef:UniRef100_Q3YUF3,UniRef:UniRef50_P69820,UniRef:UniRef90_P69820;ec_number=2.7.1.194
contig_1	Pyrodigal	gene	4453314	4453964	.	+	.	ID=GCA000010485_04359_gene;locus_tag=GCA000010485_04359;gene=ulaD
contig_1	Pyrodigal	CDS	4453314	4453964	.	+	0	ID=GCA000010485_04359;Name=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;locus_tag=GCA000010485_04359;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;Dbxref=GO:0000287,GO:0004590,GO:0006207,GO:0019854,GO:0033982;gene=ulaD;Parent=GCA000010485_04359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000056760,COG:COG0269,COG:G,KEGG:K03078,RefSeq:WP_000056749.1,SO:0001217,UniParc:UPI000011227A,UniRef:UniRef100_P39304,UniRef:UniRef50_P39304,UniRef:UniRef90_P39304;ec_number=4.1.1.85
contig_1	Pyrodigal	gene	4453974	4454828	.	+	.	ID=GCA000010485_04360_gene;locus_tag=GCA000010485_04360;gene=ulaE
contig_1	Pyrodigal	CDS	4453974	4454828	.	+	0	ID=GCA000010485_04360;Name=L-ribulose-5-phosphate 3-epimerase UlaE;locus_tag=GCA000010485_04360;product=L-ribulose-5-phosphate 3-epimerase UlaE;Dbxref=GO:0005975,GO:0016861,GO:0019854,GO:0034015;gene=ulaE;Parent=GCA000010485_04360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000949502,RefSeq:WP_000949500.1,SO:0001217,UniParc:UPI0001C22F4A,UniRef:UniRef100_A0A066SYA3,UniRef:UniRef50_P39305,UniRef:UniRef90_P39305;ec_number=5.1.3.22
contig_1	Pyrodigal	gene	4454828	4455514	.	+	.	ID=GCA000010485_04361_gene;locus_tag=GCA000010485_04361;gene=ulaF
contig_1	Pyrodigal	CDS	4454828	4455514	.	+	0	ID=GCA000010485_04361;Name=L-ribulose-5-phosphate 4-epimerase UlaF;locus_tag=GCA000010485_04361;product=L-ribulose-5-phosphate 4-epimerase UlaF;Dbxref=GO:0005829,GO:0008270,GO:0008742,GO:0016832,GO:0019323,GO:0019854;gene=ulaF;Parent=GCA000010485_04361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001170847,COG:COG0235,COG:EG,RefSeq:WP_001170805.1,SO:0001217,UniParc:UPI0000D60E6D,UniRef:UniRef100_Q8FAI6,UniRef:UniRef50_P39306,UniRef:UniRef90_Q8FAI6;ec_number=5.1.3.4
contig_1	Pyrodigal	gene	4455643	4455918	.	-	.	ID=GCA000010485_04362_gene;locus_tag=GCA000010485_04362;gene=yjfY
contig_1	Pyrodigal	CDS	4455643	4455918	.	-	0	ID=GCA000010485_04362;Name=putative protein YjfY;locus_tag=GCA000010485_04362;product=putative protein YjfY;Dbxref=GO:0042597;gene=yjfY;Parent=GCA000010485_04362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000492914.1,SO:0001217,UniParc:UPI000013B573,UniRef:UniRef100_P0AF86,UniRef:UniRef50_P0AF86,UniRef:UniRef90_P0AF86
contig_1	Infernal	regulatory_region	4456164	4456248	1.3e-22	+	.	ID=EFPPCJGBKI_286;Name=RpsF leader;product=RpsF leader;Dbxref=RFAM:RF02893;inference=profile:Rfam:RF02893;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	4456246	4456641	.	+	.	ID=GCA000010485_04363_gene;locus_tag=GCA000010485_04363;gene=rpsF
contig_1	Pyrodigal	CDS	4456246	4456641	.	+	0	ID=GCA000010485_04363;Name=30S ribosomal protein S6;locus_tag=GCA000010485_04363;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsF;Parent=GCA000010485_04363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_001216676.1,SO:0001217,UniParc:UPI00001350AB,UniRef:UniRef100_P02358,UniRef:UniRef50_P02358,UniRef:UniRef90_P02358
contig_1	Pyrodigal	gene	4456648	4456962	.	+	.	ID=GCA000010485_04364_gene;locus_tag=GCA000010485_04364;gene=priB
contig_1	Pyrodigal	CDS	4456648	4456962	.	+	0	ID=GCA000010485_04364;Name=primosomal replication protein N;locus_tag=GCA000010485_04364;product=primosomal replication protein N;Dbxref=GO:0003697,GO:0006260,GO:0006269,GO:0030894,GO:1990077;gene=priB;Parent=GCA000010485_04364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2965,COG:L,RefSeq:WP_001296681.1,SO:0001217,UniParc:UPI00000D0367,UniRef:UniRef100_A7ZV72,UniRef:UniRef50_P07013,UniRef:UniRef90_A4W5T0
contig_1	Pyrodigal	gene	4456967	4457194	.	+	.	ID=GCA000010485_04365_gene;locus_tag=GCA000010485_04365;gene=rpsR
contig_1	Pyrodigal	CDS	4456967	4457194	.	+	0	ID=GCA000010485_04365;Name=30S ribosomal protein S18;locus_tag=GCA000010485_04365;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000010485_04365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_000135199.1,SO:0001217,UniParc:UPI000005A94A,UniRef:UniRef100_A8AMJ6,UniRef:UniRef50_A8AMJ6,UniRef:UniRef90_A8AMJ6
contig_1	Pyrodigal	gene	4457236	4457685	.	+	.	ID=GCA000010485_04366_gene;locus_tag=GCA000010485_04366;gene=rplI
contig_1	Pyrodigal	CDS	4457236	4457685	.	+	0	ID=GCA000010485_04366;Name=50S ribosomal protein L9;locus_tag=GCA000010485_04366;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplI;Parent=GCA000010485_04366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,KEGG:K02939,RefSeq:WP_001196062.1,SO:0001217,UniParc:UPI00001341E9,UniRef:UniRef100_P0A7R1,UniRef:UniRef50_P0A7R1,UniRef:UniRef90_P0A7R1
contig_1	Pyrodigal	gene	4458087	4458578	.	+	.	ID=GCA000010485_04367_gene;locus_tag=GCA000010485_04367
contig_1	Pyrodigal	CDS	4458087	4458578	.	+	0	ID=GCA000010485_04367;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_04367;product=Helix-turn-helix domain-containing protein;Parent=GCA000010485_04367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000516894.1,SO:0001217,UniParc:UPI0001C22F4B,UniRef:UniRef100_A0A066SQD7,UniRef:UniRef50_H0FE91,UniRef:UniRef90_A0A066SQD7
contig_1	Pyrodigal	gene	4458581	4459087	.	+	.	ID=GCA000010485_04368_gene;locus_tag=GCA000010485_04368;gene=hipA
contig_1	Pyrodigal	CDS	4458581	4459087	.	+	0	ID=GCA000010485_04368;Name=HipA N-terminal subdomain 1 domain-containing protein;locus_tag=GCA000010485_04368;product=HipA N-terminal subdomain 1 domain-containing protein;gene=hipA;Parent=GCA000010485_04368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001296683.1,SO:0001217,UniParc:UPI0001C22F4C,UniRef:UniRef100_A0A1U9TXQ8,UniRef:UniRef50_A0A0H2VF55,UniRef:UniRef90_A0A0H2VF55
contig_1	Pyrodigal	gene	4459087	4459848	.	+	.	ID=GCA000010485_04369_gene;locus_tag=GCA000010485_04369
contig_1	Pyrodigal	CDS	4459087	4459848	.	+	0	ID=GCA000010485_04369;Name=HipA-like C-terminal domain-containing protein;locus_tag=GCA000010485_04369;product=HipA-like C-terminal domain-containing protein;Parent=GCA000010485_04369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07154,RefSeq:WP_001531217.1,SO:0001217,UniParc:UPI0001C22F4D,UniRef:UniRef100_A0A6D0GAG1,UniRef:UniRef50_S6AXA6,UniRef:UniRef90_A0A0H3ESK6;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	4459991	4461268	.	-	.	ID=GCA000010485_04370_gene;locus_tag=GCA000010485_04370
contig_1	Pyrodigal	CDS	4459991	4461268	.	-	0	ID=GCA000010485_04370;Name=MFS transporter;locus_tag=GCA000010485_04370;product=MFS transporter;Parent=GCA000010485_04370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033607.1,SO:0001217,UniParc:UPI0001C22F4E,UniRef:UniRef100_A0A061KI47,UniRef:UniRef50_A9MQM5,UniRef:UniRef90_A0A0D8VTE4
contig_1	Pyrodigal	gene	4461361	4463433	.	-	.	ID=GCA000010485_04371_gene;locus_tag=GCA000010485_04371
contig_1	Pyrodigal	CDS	4461361	4463433	.	-	0	ID=GCA000010485_04371;Name=FAD-dependent oxidoreductase 2 FAD binding domain-containing protein;locus_tag=GCA000010485_04371;product=FAD-dependent oxidoreductase 2 FAD binding domain-containing protein;Parent=GCA000010485_04371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000080320.1,SO:0001217,UniParc:UPI0001C22F4F,UniRef:UniRef100_A0A061YKD4,UniRef:UniRef50_A0AAE9PVY4,UniRef:UniRef90_A0AAE9PVY4
contig_1	Pyrodigal	gene	4463430	4464971	.	-	.	ID=GCA000010485_04372_gene;locus_tag=GCA000010485_04372;gene=ydiF
contig_1	Pyrodigal	CDS	4463430	4464971	.	-	0	ID=GCA000010485_04372;Name=Acetate CoA-transferase YdiF;locus_tag=GCA000010485_04372;product=Acetate CoA-transferase YdiF;gene=ydiF;Parent=GCA000010485_04372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01026,RefSeq:WP_001228948.1,SO:0001217,UniParc:UPI0001C22F50,UniRef:UniRef100_A0A066SQD1,UniRef:UniRef50_A0A5E7G1H9,UniRef:UniRef90_W8SXJ3;ec_number=2.8.3.1
contig_1	Pyrodigal	gene	4464981	4465757	.	-	.	ID=GCA000010485_04373_gene;locus_tag=GCA000010485_04373
contig_1	Pyrodigal	CDS	4464981	4465757	.	-	0	ID=GCA000010485_04373;Name=Acyl-CoA hydratase;locus_tag=GCA000010485_04373;product=Acyl-CoA hydratase;Parent=GCA000010485_04373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000999661.1,SO:0001217,UniParc:UPI0001C22F51,UniRef:UniRef100_A0A066SQM2,UniRef:UniRef50_A0A037Y4K8,UniRef:UniRef90_A0A037Y4K8
contig_1	Pyrodigal	gene	4465767	4466609	.	-	.	ID=GCA000010485_04374_gene;locus_tag=GCA000010485_04374
contig_1	Pyrodigal	CDS	4465767	4466609	.	-	0	ID=GCA000010485_04374;Name=Endonuclease;locus_tag=GCA000010485_04374;product=Endonuclease;Parent=GCA000010485_04374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001205256.1,SO:0001217,UniParc:UPI0001C22F52,UniRef:UniRef100_A0A066SZ20,UniRef:UniRef50_A0AAQ1Q4B4,UniRef:UniRef90_A0AAQ1Q4B4
contig_1	Pyrodigal	gene	4466619	4467410	.	-	.	ID=GCA000010485_04375_gene;locus_tag=GCA000010485_04375
contig_1	Pyrodigal	CDS	4466619	4467410	.	-	0	ID=GCA000010485_04375;Name=3-ketoacyl-ACP reductase;locus_tag=GCA000010485_04375;product=3-ketoacyl-ACP reductase;Dbxref=GO:0016491;Parent=GCA000010485_04375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000843394.1,SO:0001217,UniParc:UPI00000DF427,UniRef:UniRef100_E2QKZ9,UniRef:UniRef50_E2QKZ9,UniRef:UniRef90_E2QKZ9
contig_1	Pyrodigal	gene	4467623	4468270	.	+	.	ID=GCA000010485_04376_gene;locus_tag=GCA000010485_04376;gene=nicS
contig_1	Pyrodigal	CDS	4467623	4468270	.	+	0	ID=GCA000010485_04376;Name=HTH-type transcriptional repressor NicS;locus_tag=GCA000010485_04376;product=HTH-type transcriptional repressor NicS;gene=nicS;Parent=GCA000010485_04376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298021.1,SO:0001217,UniParc:UPI00005EF56E,UniRef:UniRef100_A0A0G3JUI4,UniRef:UniRef50_A0A4R1N4Z7,UniRef:UniRef90_W8TWR3
contig_1	Pyrodigal	gene	4468254	4468892	.	-	.	ID=GCA000010485_04377_gene;locus_tag=GCA000010485_04377;gene=ytfB
contig_1	Pyrodigal	CDS	4468254	4468892	.	-	0	ID=GCA000010485_04377;Name=cell division protein YtfB;locus_tag=GCA000010485_04377;product=cell division protein YtfB;Dbxref=GO:0000920,GO:0004222,GO:0005886,GO:0042834,GO:0043093;gene=ytfB;Parent=GCA000010485_04377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001119478,COG:COG3061,COG:D,RefSeq:WP_001119474.1,SO:0001217,UniParc:UPI0000DAD143,UniRef:UniRef100_A0A0G9FKI7,UniRef:UniRef50_P39310,UniRef:UniRef90_P39310
contig_1	Pyrodigal	gene	4469110	4469730	.	+	.	ID=GCA000010485_04378_gene;locus_tag=GCA000010485_04378;gene=fklB
contig_1	Pyrodigal	CDS	4469110	4469730	.	+	0	ID=GCA000010485_04378;Name=FKBP-type peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000010485_04378;product=FKBP-type peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0006457,GO:0140839,GO:0140840;gene=fklB;Parent=GCA000010485_04378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000211225,COG:COG0545,COG:O,RefSeq:WP_000211225.1,SO:0001217,UniParc:UPI00001B514B,UniRef:UniRef100_P0A9L3,UniRef:UniRef50_P0A9L3,UniRef:UniRef90_P0A9L3;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	4470039	4471451	.	+	.	ID=GCA000010485_04379_gene;locus_tag=GCA000010485_04379;gene=cycA
contig_1	Pyrodigal	CDS	4470039	4471451	.	+	0	ID=GCA000010485_04379;Name=D-serine/D-alanine/glycine transporter;locus_tag=GCA000010485_04379;product=D-serine/D-alanine/glycine transporter;Dbxref=GO:0001761,GO:0001762,GO:0005886,GO:0006865,GO:0015180,GO:0015187,GO:0015293,GO:0015808,GO:0015816,GO:0016020,GO:0042941,GO:0042942,GO:0042944,GO:0042945,GO:0055085;gene=cycA;Parent=GCA000010485_04379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000228365.1,SO:0001217,UniParc:UPI0001C22F53,UniRef:UniRef100_A0A3K2VGE8,UniRef:UniRef50_P0AAE0,UniRef:UniRef90_P0AAE0
contig_1	Pyrodigal	gene	4471496	4472158	.	-	.	ID=GCA000010485_04380_gene;locus_tag=GCA000010485_04380;gene=ytfE
contig_1	Pyrodigal	CDS	4471496	4472158	.	-	0	ID=GCA000010485_04380;Name=iron-sulfur cluster repair protein YtfE;locus_tag=GCA000010485_04380;product=iron-sulfur cluster repair protein YtfE;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0046872,GO:0051409;gene=ytfE;Parent=GCA000010485_04380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2846,COG:O,RefSeq:WP_000331453.1,SO:0001217,UniParc:UPI0001C22F54,UniRef:UniRef100_A0A515RC24,UniRef:UniRef50_P69506,UniRef:UniRef90_P69506
contig_1	Pyrodigal	gene	4472266	4473231	.	-	.	ID=GCA000010485_04381_gene;locus_tag=GCA000010485_04381;gene=ytfF
contig_1	Pyrodigal	CDS	4472266	4473231	.	-	0	ID=GCA000010485_04381;Name=Inner membrane protein YtfF;locus_tag=GCA000010485_04381;product=Inner membrane protein YtfF;Dbxref=GO:0005886;gene=ytfF;Parent=GCA000010485_04381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_001304672.1,SO:0001217,UniParc:UPI00019F4AA4,UniRef:UniRef100_A0A0J2AH30,UniRef:UniRef50_P39314,UniRef:UniRef90_P39314
contig_1	Pyrodigal	gene	4473340	4474200	.	-	.	ID=GCA000010485_04382_gene;locus_tag=GCA000010485_04382;gene=qorB
contig_1	Pyrodigal	CDS	4473340	4474200	.	-	0	ID=GCA000010485_04382;Name=NAD(P)H:quinone oxidoreductase;locus_tag=GCA000010485_04382;product=NAD(P)H:quinone oxidoreductase;Dbxref=GO:0005829,GO:0008753,GO:0016655,GO:0050136;gene=qorB;Parent=GCA000010485_04382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000560561,COG:COG0702,COG:R,RefSeq:WP_000560579.1,SO:0001217,UniParc:UPI0001C22F55,UniRef:UniRef100_A0A515RC21,UniRef:UniRef50_P39315,UniRef:UniRef90_P39315;ec_number=1.6.5.2
contig_1	Pyrodigal	gene	4474289	4474669	.	+	.	ID=GCA000010485_04383_gene;locus_tag=GCA000010485_04383;gene=hxlR
contig_1	Pyrodigal	CDS	4474289	4474669	.	+	0	ID=GCA000010485_04383;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000010485_04383;product=Helix-turn-helix domain-containing protein;gene=hxlR;Parent=GCA000010485_04383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1733,COG:K,RefSeq:WP_001531221.1,SO:0001217,UniParc:UPI0001C22F56,UniRef:UniRef100_A0A515RC12,UniRef:UniRef50_P0ACN2,UniRef:UniRef90_A0A148HLW3
contig_1	Pyrodigal	gene	4474798	4476741	.	-	.	ID=GCA000010485_04384_gene;locus_tag=GCA000010485_04384;gene=cpdB
contig_1	Pyrodigal	CDS	4474798	4476741	.	-	0	ID=GCA000010485_04384;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA000010485_04384;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;Dbxref=GO:0000166,GO:0006974,GO:0008254,GO:0008663,GO:0009117,GO:0009166,GO:0030288,GO:0046872;gene=cpdB;Parent=GCA000010485_04384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000589431.1,SO:0001217,UniParc:UPI0000127BE1,UniRef:UniRef100_P08331,UniRef:UniRef50_P08331,UniRef:UniRef90_P08331;ec_number=3.1.4.16
contig_1	Infernal	gene	4476742	4476864	.	+	.	ID=GCA000010485_04385_gene;locus_tag=GCA000010485_04385;gene=ES239
contig_1	Infernal	ncRNA	4476742	4476864	5.5e-27	+	.	ID=GCA000010485_04385;Name=ES239 sRNA;locus_tag=GCA000010485_04385;product=ES239 sRNA;Dbxref=RFAM:RF02756;Parent=GCA000010485_04385_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02756
contig_1	Pyrodigal	gene	4476931	4477671	.	+	.	ID=GCA000010485_04386_gene;locus_tag=GCA000010485_04386;gene=cysQ
contig_1	Pyrodigal	CDS	4476931	4477671	.	+	0	ID=GCA000010485_04386;Name=3'(2')%2C5'-bisphosphate nucleotidase CysQ;locus_tag=GCA000010485_04386;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;Dbxref=GO:0000103,GO:0000287,GO:0005886,GO:0008441,GO:0046854,GO:0050427;gene=cysQ;Parent=GCA000010485_04386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1218,COG:P,KEGG:K01082,RefSeq:WP_000886909.1,SO:0001217,UniParc:UPI00000DF431,UniRef:UniRef100_Q8FAG5,UniRef:UniRef50_P22255,UniRef:UniRef90_Q8FAG5;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	4477661	4478218	.	-	.	ID=GCA000010485_04387_gene;locus_tag=GCA000010485_04387;gene=ytfJ
contig_1	Pyrodigal	CDS	4477661	4478218	.	-	0	ID=GCA000010485_04387;Name=putative protein YtfJ;locus_tag=GCA000010485_04387;product=putative protein YtfJ;Dbxref=GO:0042597;gene=ytfJ;Parent=GCA000010485_04387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3054,COG:R,KEGG:K07109,RefSeq:WP_000175286.1,SO:0001217,UniParc:UPI00005EEDC9,UniRef:UniRef100_J7QJS8,UniRef:UniRef50_P39187,UniRef:UniRef90_P39187
contig_1	Pyrodigal	gene	4478543	4478749	.	+	.	ID=GCA000010485_04388_gene;locus_tag=GCA000010485_04388;gene=ytfK
contig_1	Pyrodigal	CDS	4478543	4478749	.	+	0	ID=GCA000010485_04388;Name=putative protein YtfK;locus_tag=GCA000010485_04388;product=putative protein YtfK;Dbxref=GO:0006979,GO:0015968,GO:0016036;gene=ytfK;Parent=GCA000010485_04388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000689228.1,SO:0001217,UniParc:UPI000013C140,UniRef:UniRef100_P0ADE2,UniRef:UniRef50_P0ADE2,UniRef:UniRef90_P0ADE2
contig_1	Pyrodigal	gene	4478810	4480153	.	-	.	ID=GCA000010485_04389_gene;locus_tag=GCA000010485_04389;gene=paeA
contig_1	Pyrodigal	CDS	4478810	4480153	.	-	0	ID=GCA000010485_04389;Name=Polyamine export protein;locus_tag=GCA000010485_04389;product=Polyamine export protein;Dbxref=GO:0005886,GO:0050660;gene=paeA;Parent=GCA000010485_04389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03699,RefSeq:WP_000935038.1,SO:0001217,UniParc:UPI0001C22F87,UniRef:UniRef100_A0A515RSS3,UniRef:UniRef50_P0AE45,UniRef:UniRef90_P0AE45
contig_1	Infernal	gene	4480215	4480272	.	-	.	ID=GCA000010485_04390_gene;locus_tag=GCA000010485_04390;gene=STnc450
contig_1	Infernal	ncRNA	4480215	4480272	1.2e-14	-	.	ID=GCA000010485_04390;Name=Enterobacterial sRNA STnc450;locus_tag=GCA000010485_04390;product=Enterobacterial sRNA STnc450;Dbxref=RFAM:RF02051;Parent=GCA000010485_04390_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02051
contig_1	Pyrodigal	gene	4480476	4481114	.	-	.	ID=GCA000010485_04391_gene;locus_tag=GCA000010485_04391;gene=msrA
contig_1	Pyrodigal	CDS	4480476	4481114	.	-	0	ID=GCA000010485_04391;Name=Peptide methionine sulfoxide reductase MsrA;locus_tag=GCA000010485_04391;product=Peptide methionine sulfoxide reductase MsrA;Dbxref=GO:0005737,GO:0008113,GO:0034599,GO:0036211,GO:0036456;gene=msrA;Parent=GCA000010485_04391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_001305659.1,SO:0001217,UniParc:UPI00018879D9,UniRef:UniRef100_B7NUD2,UniRef:UniRef50_P0A744,UniRef:UniRef90_P0A744;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	4481321	4483054	.	+	.	ID=GCA000010485_04392_gene;locus_tag=GCA000010485_04392;gene=tamA
contig_1	Pyrodigal	CDS	4481321	4483054	.	+	0	ID=GCA000010485_04392;Name=autotransporter assembly complex protein TamA;locus_tag=GCA000010485_04392;product=autotransporter assembly complex protein TamA;Dbxref=GO:0005886,GO:0009279,GO:0009306,GO:0089705,GO:0097347;gene=tamA;Parent=GCA000010485_04392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001120231,COG:COG0729,COG:M,RefSeq:WP_001269314.1,SO:0001217,UniParc:UPI00005EF566,UniRef:UniRef100_A0A0G9FLC0,UniRef:UniRef50_P0ADE4,UniRef:UniRef90_P0ADE4
contig_1	Pyrodigal	gene	4483051	4486830	.	+	.	ID=GCA000010485_04393_gene;locus_tag=GCA000010485_04393;gene=tamB
contig_1	Pyrodigal	CDS	4483051	4486830	.	+	0	ID=GCA000010485_04393;Name=autotransporter assembly complex protein TamB;locus_tag=GCA000010485_04393;product=autotransporter assembly complex protein TamB;Dbxref=GO:0005886,GO:0009279,GO:0009306,GO:0089705,GO:0097347;gene=tamB;Parent=GCA000010485_04393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000060815,COG:COG2911,COG:U,RefSeq:WP_000060870.1,SO:0001217,UniParc:UPI0001C22F88,UniRef:UniRef100_A0A515RSS0,UniRef:UniRef50_P39321,UniRef:UniRef90_P39321
contig_1	Pyrodigal	gene	4486833	4487174	.	+	.	ID=GCA000010485_04394_gene;locus_tag=GCA000010485_04394;gene=ytfP
contig_1	Pyrodigal	CDS	4486833	4487174	.	+	0	ID=GCA000010485_04394;Name=Gamma-glutamylcyclotransferase family protein YtfP;locus_tag=GCA000010485_04394;product=Gamma-glutamylcyclotransferase family protein YtfP;Dbxref=GO:0005829,GO:0061929;gene=ytfP;Parent=GCA000010485_04394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2105,COG:E,RefSeq:WP_001219160.1,SO:0001217,UniParc:UPI000011DD53,UniRef:UniRef100_P0AE48,UniRef:UniRef50_P0AE48,UniRef:UniRef90_P0AE48
contig_1	Pyrodigal	gene	4487552	4488082	.	-	.	ID=GCA000010485_04395_gene;locus_tag=GCA000010485_04395;gene=ppa
contig_1	Pyrodigal	CDS	4487552	4488082	.	-	0	ID=GCA000010485_04395;Name=inorganic diphosphatase;locus_tag=GCA000010485_04395;product=inorganic diphosphatase;Dbxref=GO:0000287,GO:0004427,GO:0005829,GO:0006796;gene=ppa;Parent=GCA000010485_04395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0221,RefSeq:WP_000055072.1,SO:0001217,UniParc:UPI00000DF436,UniRef:UniRef100_Q8FAG0,UniRef:UniRef50_P0A7A9,UniRef:UniRef90_P0A7A9;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	4488392	4489348	.	+	.	ID=GCA000010485_04396_gene;locus_tag=GCA000010485_04396;gene=ytfQ
contig_1	Pyrodigal	CDS	4488392	4489348	.	+	0	ID=GCA000010485_04396;Name=galactofuranose ABC transporter substrate-binding protein YtfQ;locus_tag=GCA000010485_04396;product=galactofuranose ABC transporter substrate-binding protein YtfQ;Dbxref=GO:0005534,GO:0015757,GO:0030288,GO:0042875,GO:0055052,GO:0103116,GO:0140271;gene=ytfQ;Parent=GCA000010485_04396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000265913,COG:COG1879,COG:G,RefSeq:WP_000265933.1,SO:0001217,UniParc:UPI00005EEDCD,UniRef:UniRef100_E2QL19,UniRef:UniRef50_P39325,UniRef:UniRef90_P39325;ec_number=7.5.2.9
contig_1	Pyrodigal	gene	4489561	4491063	.	+	.	ID=GCA000010485_04397_gene;locus_tag=GCA000010485_04397;gene=ytfR
contig_1	Pyrodigal	CDS	4489561	4491063	.	+	0	ID=GCA000010485_04397;Name=Galactofuranose transporter ATP-binding protein YtfR;locus_tag=GCA000010485_04397;product=Galactofuranose transporter ATP-binding protein YtfR;Dbxref=GO:0005524,GO:0016887,GO:0042626,GO:0055052,GO:0103116,GO:0140271;gene=ytfR;Parent=GCA000010485_04397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,KEGG:K10820,RefSeq:WP_000205840.1,SO:0001217,UniParc:UPI0001C22F89,UniRef:UniRef100_A0A2D3MYT1,UniRef:UniRef50_Q6BEX0,UniRef:UniRef90_Q6BEX0;ec_number=7.5.2.9
contig_1	Pyrodigal	gene	4491077	4492099	.	+	.	ID=GCA000010485_04398_gene;locus_tag=GCA000010485_04398;gene=ytfT
contig_1	Pyrodigal	CDS	4491077	4492099	.	+	0	ID=GCA000010485_04398;Name=galactofuranose ABC transporter%2C ATP-binding protein YtfT;locus_tag=GCA000010485_04398;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;Dbxref=GO:0005886,GO:0022857,GO:0042875,GO:0055052,GO:0103116,GO:0140271;gene=ytfT;Parent=GCA000010485_04398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298067.1,SO:0001217,UniParc:UPI0000DAD149,UniRef:UniRef100_A0A0G9FKK8,UniRef:UniRef50_P39328,UniRef:UniRef90_P39328;ec_number=7.5.2.9
contig_1	Pyrodigal	gene	4492086	4493081	.	+	.	ID=GCA000010485_04399_gene;locus_tag=GCA000010485_04399;gene=yjfF
contig_1	Pyrodigal	CDS	4492086	4493081	.	+	0	ID=GCA000010485_04399;Name=galactofuranose ABC transporter%2C permease protein YjfF;locus_tag=GCA000010485_04399;product=galactofuranose ABC transporter%2C permease protein YjfF;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0042875,GO:0055052,GO:0103116,GO:0140271;gene=yjfF;Parent=GCA000010485_04399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_000595994.1,SO:0001217,UniParc:UPI0001C22F8A,UniRef:UniRef100_A0A515RST1,UniRef:UniRef50_P37772,UniRef:UniRef90_P37772;ec_number=7.5.2.9
contig_1	Pyrodigal	gene	4493114	4494112	.	-	.	ID=GCA000010485_04400_gene;locus_tag=GCA000010485_04400;gene=fbp
contig_1	Pyrodigal	CDS	4493114	4494112	.	-	0	ID=GCA000010485_04400;Name=class 1 fructose-bisphosphatase;locus_tag=GCA000010485_04400;product=class 1 fructose-bisphosphatase;Dbxref=GO:0000287,GO:0005829,GO:0005975,GO:0005986,GO:0006000,GO:0006002,GO:0006094,GO:0030388,GO:0042132;gene=fbp;Parent=GCA000010485_04400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0158,COG:G,KEGG:K03841,RefSeq:WP_000853753.1,SO:0001217,UniParc:UPI000012A3CD,UniRef:UniRef100_P0A993,UniRef:UniRef50_P0A993,UniRef:UniRef90_P0A993;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	4494288	4495661	.	+	.	ID=GCA000010485_04401_gene;locus_tag=GCA000010485_04401;gene=mpl
contig_1	Pyrodigal	CDS	4494288	4495661	.	+	0	ID=GCA000010485_04401;Name=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;locus_tag=GCA000010485_04401;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;Dbxref=GO:0009252,GO:0016881,GO:0071555;gene=mpl;Parent=GCA000010485_04401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02558,RefSeq:WP_001219792.1,SO:0001217,UniParc:UPI00000D0238,UniRef:UniRef100_C3SFB2,UniRef:UniRef50_P37773,UniRef:UniRef90_C3SFB2;ec_number=6.3.2.45
contig_1	Infernal	gene	4495693	4495770	.	+	.	ID=GCA000010485_04402_gene;locus_tag=GCA000010485_04402;gene=naRNA4
contig_1	Infernal	ncRNA	4495693	4495770	4.9e-13	+	.	ID=GCA000010485_04402;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04402;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04402_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4495819	4496370	.	-	.	ID=GCA000010485_04403_gene;locus_tag=GCA000010485_04403;gene=yjgA
contig_1	Pyrodigal	CDS	4495819	4496370	.	-	0	ID=GCA000010485_04403;Name=ribosome biogenesis factor YjgA;locus_tag=GCA000010485_04403;product=ribosome biogenesis factor YjgA;Dbxref=GO:0005829,GO:0019843,GO:0042254;gene=yjgA;Parent=GCA000010485_04403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3028,COG:J,KEGG:K09889,RefSeq:WP_000166270.1,SO:0001217,UniParc:UPI000013B57A,UniRef:UniRef100_P0A8X0,UniRef:UniRef50_P0A8X0,UniRef:UniRef90_P0A8X0
contig_1	Pyrodigal	gene	4496464	4497816	.	+	.	ID=GCA000010485_04404_gene;locus_tag=GCA000010485_04404;gene=pmbA
contig_1	Pyrodigal	CDS	4496464	4497816	.	+	0	ID=GCA000010485_04404;Name=metalloprotease PmbA;locus_tag=GCA000010485_04404;product=metalloprotease PmbA;Dbxref=GO:0005737,GO:0005829,GO:0006508,GO:0008237,GO:0016485,GO:1905368;gene=pmbA;Parent=GCA000010485_04404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,KEGG:K03592,RefSeq:WP_001162187.1,SO:0001217,UniParc:UPI000187C08B,UniRef:UniRef100_A0A0G9FKL2,UniRef:UniRef50_P0AFK0,UniRef:UniRef90_P0AFK0;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	4497871	4498257	.	+	.	ID=GCA000010485_04405_gene;locus_tag=GCA000010485_04405;gene=cybC
contig_1	Pyrodigal	CDS	4497871	4498257	.	+	0	ID=GCA000010485_04405;Name=cytochrome b562;locus_tag=GCA000010485_04405;product=cytochrome b562;Dbxref=GO:0005506,GO:0009055,GO:0020037,GO:0022900,GO:0042597;gene=cybC;Parent=GCA000010485_04405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001232246.1,SO:0001217,UniParc:UPI00005EF560,UniRef:UniRef100_A0A0J3WFI9,UniRef:UniRef50_P0ABE7,UniRef:UniRef90_P0ABE7
contig_1	Pyrodigal	gene	4498302	4498766	.	-	.	ID=GCA000010485_04406_gene;locus_tag=GCA000010485_04406;gene=nrdG
contig_1	Pyrodigal	CDS	4498302	4498766	.	-	0	ID=GCA000010485_04406;Name=anaerobic ribonucleoside-triphosphate reductase-activating protein;locus_tag=GCA000010485_04406;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;Dbxref=GO:0009265,GO:0015949,GO:0031250,GO:0043365,GO:0046872,GO:0051536,GO:0051539;gene=nrdG;Parent=GCA000010485_04406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K04068,RefSeq:WP_001106230.1,SO:0001217,UniParc:UPI00000DF43F,UniRef:UniRef100_A0A2G9BR20,UniRef:UniRef50_P0A9N8,UniRef:UniRef90_P0A9N8;ec_number=1.97.1.-
contig_1	Pyrodigal	gene	4498924	4501062	.	-	.	ID=GCA000010485_04407_gene;locus_tag=GCA000010485_04407;gene=nrdD
contig_1	Pyrodigal	CDS	4498924	4501062	.	-	0	ID=GCA000010485_04407;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA000010485_04407;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0005524,GO:0006260,GO:0008270,GO:0008998,GO:0009265,GO:0015949,GO:0031250,GO:0032556,GO:0032564,GO:0032567;gene=nrdD;Parent=GCA000010485_04407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,KEGG:K21636,RefSeq:WP_000187799.1,SO:0001217,UniParc:UPI00000DF440,UniRef:UniRef100_A0A0G9FLD1,UniRef:UniRef50_P28903,UniRef:UniRef90_P28903;ec_number=1.17.4.2
contig_1	Pyrodigal	gene	4501456	4503111	.	-	.	ID=GCA000010485_04408_gene;locus_tag=GCA000010485_04408;gene=treC
contig_1	Pyrodigal	CDS	4501456	4503111	.	-	0	ID=GCA000010485_04408;Name=alpha%2Calpha-phosphotrehalase;locus_tag=GCA000010485_04408;product=alpha%2Calpha-phosphotrehalase;Dbxref=GO:0004556,GO:0005737,GO:0005829,GO:0005991,GO:0005993,GO:0006974,GO:0008788,GO:0009313;gene=treC;Parent=GCA000010485_04408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_001312398.1,SO:0001217,UniParc:UPI0001C22F8B,UniRef:UniRef100_A0A2D3QBZ5,UniRef:UniRef50_P28904,UniRef:UniRef90_P28904;ec_number=3.2.1.93
contig_1	Pyrodigal	gene	4503161	4504582	.	-	.	ID=GCA000010485_04409_gene;locus_tag=GCA000010485_04409;gene=treB
contig_1	Pyrodigal	CDS	4503161	4504582	.	-	0	ID=GCA000010485_04409;Name=PTS trehalose transporter subunit IIBC;locus_tag=GCA000010485_04409;product=PTS trehalose transporter subunit IIBC;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0015574,GO:0015771,GO:0016020,GO:0016301,GO:0090589;gene=treB;Parent=GCA000010485_04409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02819,RefSeq:WP_001531227.1,SO:0001217,UniParc:UPI0001C22F8C,UniRef:UniRef100_A0A515RSV0,UniRef:UniRef50_P36672,UniRef:UniRef90_P36672;ec_number=2.7.1.201
contig_1	Pyrodigal	gene	4504701	4505648	.	-	.	ID=GCA000010485_04410_gene;locus_tag=GCA000010485_04410;gene=treR
contig_1	Pyrodigal	CDS	4504701	4505648	.	-	0	ID=GCA000010485_04410;Name=trehalose operon repressor TreR;locus_tag=GCA000010485_04410;product=trehalose operon repressor TreR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0005991,GO:0006355,GO:0045892;gene=treR;Parent=GCA000010485_04410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03485,RefSeq:WP_001181333.1,SO:0001217,UniParc:UPI00005EF55D,UniRef:UniRef100_A0A0G9FR67,UniRef:UniRef50_P36673,UniRef:UniRef90_P36673
contig_1	Infernal	regulatory_region	4505818	4505933	7.7e-21	+	.	ID=EFPPCJGBKI_291;Name=Magnesium riboswitch aptamer (Magnesium responsive RNA element);product=Magnesium riboswitch aptamer (Magnesium responsive RNA element);Dbxref=RFAM:RF01056;inference=profile:Rfam:RF01056;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Bakta	gene	4505833	4505886	.	+	.	ID=GCA000010485_04411_gene;locus_tag=GCA000010485_04411;inference=ab initio prediction:Bakta;gene=mgtL
contig_1	Bakta	CDS	4505833	4505886	.	+	0	ID=GCA000010485_04411;Name=mgtA leader peptide;locus_tag=GCA000010485_04411;product=mgtA leader peptide;Dbxref=GO:0031556,GO:0032026;gene=mgtL;Parent=GCA000010485_04411_gene;Note=RefSeq:WP_001387276.1,SO:0001217,UniParc:UPI0001E5E825,UniRef:UniRef100_E2JKY7,UniRef:UniRef50_E2JKY7,UniRef:UniRef90_E2JKY7
contig_1	Pyrodigal	gene	4506027	4508723	.	+	.	ID=GCA000010485_04412_gene;locus_tag=GCA000010485_04412;gene=mgtA
contig_1	Pyrodigal	CDS	4506027	4508723	.	+	0	ID=GCA000010485_04412;Name=magnesium-translocating P-type ATPase;locus_tag=GCA000010485_04412;product=magnesium-translocating P-type ATPase;Dbxref=GO:0005524,GO:0005886,GO:0015444,GO:0015662,GO:0015693,GO:0016020,GO:0016887,GO:0019829,GO:0043231,GO:0046872,GO:0071286,GO:1903830;gene=mgtA;Parent=GCA000010485_04412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0474,COG:P,KEGG:K01531,RefSeq:WP_000471858.1,SO:0001217,UniParc:UPI00000DF444,UniRef:UniRef100_A0A237KGN8,UniRef:UniRef50_P0ABB8,UniRef:UniRef90_P0ABB8;ec_number=7.2.2.14
contig_1	Pyrodigal	gene	4508929	4509315	.	-	.	ID=GCA000010485_04413_gene;locus_tag=GCA000010485_04413;gene=ridA
contig_1	Pyrodigal	CDS	4508929	4509315	.	-	0	ID=GCA000010485_04413;Name=2-iminobutanoate/2-iminopropanoate deaminase;locus_tag=GCA000010485_04413;product=2-iminobutanoate/2-iminopropanoate deaminase;Dbxref=GO:0005829,GO:0009097,GO:0009636,GO:0120242,GO:0120243;gene=ridA;Parent=GCA000010485_04413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000047544,COG:COG0251,COG:V,RefSeq:WP_000047539.1,SO:0001217,UniParc:UPI00005EEDD9,UniRef:UniRef100_P0AF93,UniRef:UniRef50_P0AF93,UniRef:UniRef90_P0AF93;ec_number=3.5.99.10
contig_1	Pyrodigal	gene	4509388	4509849	.	-	.	ID=GCA000010485_04414_gene;locus_tag=GCA000010485_04414;gene=pyrI
contig_1	Pyrodigal	CDS	4509388	4509849	.	-	0	ID=GCA000010485_04414;Name=aspartate carbamoyltransferase regulatory subunit;locus_tag=GCA000010485_04414;product=aspartate carbamoyltransferase regulatory subunit;Dbxref=GO:0006207,GO:0006221,GO:0009347,GO:0046872;gene=pyrI;Parent=GCA000010485_04414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00610,RefSeq:WP_000148581.1,SO:0001217,UniParc:UPI0000110E6D,UniRef:UniRef100_P0A7F3,UniRef:UniRef50_P0A7F3,UniRef:UniRef90_P0A7F3;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	4509862	4510797	.	-	.	ID=GCA000010485_04415_gene;locus_tag=GCA000010485_04415;gene=pyrB
contig_1	Pyrodigal	CDS	4509862	4510797	.	-	0	ID=GCA000010485_04415;Name=aspartate carbamoyltransferase;locus_tag=GCA000010485_04415;product=aspartate carbamoyltransferase;Dbxref=GO:0004070,GO:0005829,GO:0006207,GO:0006520,GO:0016597,GO:0044205;gene=pyrB;Parent=GCA000010485_04415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0540,COG:F,RefSeq:WP_000013046.1,SO:0001217,UniParc:UPI0000111347,UniRef:UniRef100_P0A786,UniRef:UniRef50_P0A786,UniRef:UniRef90_P0A786;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	4511025	4511513	.	-	.	ID=GCA000010485_04416_gene;locus_tag=GCA000010485_04416
contig_1	Pyrodigal	CDS	4511025	4511513	.	-	0	ID=GCA000010485_04416;Name=Arginine repressor;locus_tag=GCA000010485_04416;product=Arginine repressor;Parent=GCA000010485_04416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03402,RefSeq:WP_000666045.1,SO:0001217,UniParc:UPI0000DAD14C,UniRef:UniRef100_A0A0G9FLE0,UniRef:UniRef50_A0A0G9FLE0,UniRef:UniRef90_A0A0G9FLE0
contig_1	Pyrodigal	gene	4511629	4513032	.	-	.	ID=GCA000010485_04417_gene;locus_tag=GCA000010485_04417
contig_1	Pyrodigal	CDS	4511629	4513032	.	-	0	ID=GCA000010485_04417;Name=C4-dicarboxylate anaerobic carrier;locus_tag=GCA000010485_04417;product=C4-dicarboxylate anaerobic carrier;Parent=GCA000010485_04417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298046.1,SO:0001217,UniParc:UPI0000DAD14D,UniRef:UniRef100_A0A0H2VGE4,UniRef:UniRef50_R9M3D0,UniRef:UniRef90_A0A0H2VGE4
contig_1	Pyrodigal	gene	4513089	4514093	.	-	.	ID=GCA000010485_04418_gene;locus_tag=GCA000010485_04418;gene=argF
contig_1	Pyrodigal	CDS	4513089	4514093	.	-	0	ID=GCA000010485_04418;Name=ornithine carbamoyltransferase;locus_tag=GCA000010485_04418;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000010485_04418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00611,RefSeq:WP_000235832.1,SO:0001217,UniParc:UPI0001C22F8D,UniRef:UniRef100_A0A515RBZ5,UniRef:UniRef50_P04391,UniRef:UniRef90_Q8FAE1;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	4514117	4515049	.	-	.	ID=GCA000010485_04419_gene;locus_tag=GCA000010485_04419;gene=arcC
contig_1	Pyrodigal	CDS	4514117	4515049	.	-	0	ID=GCA000010485_04419;Name=carbamate kinase;locus_tag=GCA000010485_04419;product=carbamate kinase;Dbxref=GO:0006520,GO:0008804;gene=arcC;Parent=GCA000010485_04419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000428627.1,SO:0001217,UniParc:UPI00000DF448,UniRef:UniRef100_A0A0V9G5M6,UniRef:UniRef50_A0A1F4BB57,UniRef:UniRef90_A0A0V9G5M6;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	4515060	4516280	.	-	.	ID=GCA000010485_04420_gene;locus_tag=GCA000010485_04420;gene=arcA
contig_1	Pyrodigal	CDS	4515060	4516280	.	-	0	ID=GCA000010485_04420;Name=arginine deiminase;locus_tag=GCA000010485_04420;product=arginine deiminase;Dbxref=GO:0005737,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000010485_04420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2235,COG:E,RefSeq:WP_001531231.1,SO:0001217,UniParc:UPI0002A37C3B,UniRef:UniRef100_A0A515RP62,UniRef:UniRef50_Q5E7U3,UniRef:UniRef90_Q8FAD9;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	4516958	4517410	.	+	.	ID=GCA000010485_04421_gene;locus_tag=GCA000010485_04421;gene=tabA
contig_1	Pyrodigal	CDS	4516958	4517410	.	+	0	ID=GCA000010485_04421;Name=Toxin-antitoxin biofilm protein TabA;locus_tag=GCA000010485_04421;product=Toxin-antitoxin biofilm protein TabA;gene=tabA;Parent=GCA000010485_04421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000635215.1,SO:0001217,UniParc:UPI00005EF559,UniRef:UniRef100_A0A178RC24,UniRef:UniRef50_A0A0H3MSU9,UniRef:UniRef90_B7LMS4
contig_1	Pyrodigal	gene	4517455	4518459	.	-	.	ID=GCA000010485_04422_gene;locus_tag=GCA000010485_04422;gene=argF
contig_1	Pyrodigal	CDS	4517455	4518459	.	-	0	ID=GCA000010485_04422;Name=ornithine carbamoyltransferase;locus_tag=GCA000010485_04422;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000010485_04422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000012939.1,SO:0001217,UniParc:UPI0001C22FC4,UniRef:UniRef100_A0A515RSW4,UniRef:UniRef50_P04391,UniRef:UniRef90_P04391;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	4518621	4519037	.	+	.	ID=GCA000010485_04423_gene;locus_tag=GCA000010485_04423;gene=rraB
contig_1	Pyrodigal	CDS	4518621	4519037	.	+	0	ID=GCA000010485_04423;Name=ribonuclease E inhibitor RraB;locus_tag=GCA000010485_04423;product=ribonuclease E inhibitor RraB;Dbxref=GO:0005829,GO:0006402,GO:0008428,GO:0019899,GO:0042803,GO:0060698,GO:0060699;gene=rraB;Parent=GCA000010485_04423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3076,COG:J,RefSeq:WP_000002952.1,SO:0001217,UniParc:UPI00005EF558,UniRef:UniRef100_A0A0G3JZM4,UniRef:UniRef50_P0AF90,UniRef:UniRef90_P0AF90
contig_1	Pyrodigal	gene	4519214	4519717	.	-	.	ID=GCA000010485_04424_gene;locus_tag=GCA000010485_04424
contig_1	Pyrodigal	CDS	4519214	4519717	.	-	0	ID=GCA000010485_04424;Name=GNAT family N-acetyltransferase;locus_tag=GCA000010485_04424;product=GNAT family N-acetyltransferase;Parent=GCA000010485_04424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298035.1,SO:0001217,UniParc:UPI00005EF557,UniRef:UniRef100_A0A0G9FKY8,UniRef:UniRef50_P39337,UniRef:UniRef90_A0AAP6B290
contig_1	Pyrodigal	gene	4519910	4521097	.	+	.	ID=GCA000010485_04425_gene;locus_tag=GCA000010485_04425
contig_1	Pyrodigal	CDS	4519910	4521097	.	+	0	ID=GCA000010485_04425;Name=Inner membrane protein;locus_tag=GCA000010485_04425;product=Inner membrane protein;Parent=GCA000010485_04425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001067071.1,SO:0001217,UniParc:UPI0001C22FC5,UniRef:UniRef100_A0A515RBX8,UniRef:UniRef50_Q08022,UniRef:UniRef90_A0A4C7ANB9
contig_1	Pyrodigal	gene	4521144	4523999	.	-	.	ID=GCA000010485_04426_gene;locus_tag=GCA000010485_04426;gene=valS
contig_1	Pyrodigal	CDS	4521144	4523999	.	-	0	ID=GCA000010485_04426;Name=valine--tRNA ligase;locus_tag=GCA000010485_04426;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004832,GO:0005524,GO:0005829,GO:0006438;gene=valS;Parent=GCA000010485_04426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,KEGG:K01873,RefSeq:WP_000416385.1,SO:0001217,UniParc:UPI0000D50EBB,UniRef:UniRef100_A0A0G3JUM2,UniRef:UniRef50_P07118,UniRef:UniRef90_P07118;ec_number=6.1.1.9
contig_1	Pyrodigal	gene	4523999	4524442	.	-	.	ID=GCA000010485_04427_gene;locus_tag=GCA000010485_04427;gene=holC
contig_1	Pyrodigal	CDS	4523999	4524442	.	-	0	ID=GCA000010485_04427;Name=DNA polymerase III subunit chi;locus_tag=GCA000010485_04427;product=DNA polymerase III subunit chi;Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0006261,GO:0009314,GO:0009360,GO:0030894,GO:0032298,GO:0043846;gene=holC;Parent=GCA000010485_04427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2927,COG:L,RefSeq:WP_000786399.1,SO:0001217,UniParc:UPI00000D04C8,UniRef:UniRef100_A0A0J2APV7,UniRef:UniRef50_P28905,UniRef:UniRef90_P28905;ec_number=2.7.7.7
contig_1	Infernal	gene	4524550	4524625	.	+	.	ID=GCA000010485_04428_gene;locus_tag=GCA000010485_04428;gene=naRNA4
contig_1	Infernal	ncRNA	4524550	4524625	2.8e-11	+	.	ID=GCA000010485_04428;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04428;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04428_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4524646	4524721	.	+	.	ID=GCA000010485_04429_gene;locus_tag=GCA000010485_04429;gene=naRNA4
contig_1	Infernal	ncRNA	4524646	4524721	2e-10	+	.	ID=GCA000010485_04429;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04429;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04429_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4524796	4526307	.	-	.	ID=GCA000010485_04430_gene;locus_tag=GCA000010485_04430;gene=pepA
contig_1	Pyrodigal	CDS	4524796	4526307	.	-	0	ID=GCA000010485_04430;Name=leucyl aminopeptidase;locus_tag=GCA000010485_04430;product=leucyl aminopeptidase;Dbxref=GO:0005737,GO:0006508,GO:0019538,GO:0030145,GO:0070006;gene=pepA;Parent=GCA000010485_04430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_000397144.1,SO:0001217,UniParc:UPI0000111A4D,UniRef:UniRef100_P68767,UniRef:UniRef50_P68767,UniRef:UniRef90_P68767;ec_number=3.4.11.1
contig_1	Infernal	gene	4525555	4525749	.	+	.	ID=GCA000010485_04431_gene;locus_tag=GCA000010485_04431;gene=Ysr276
contig_1	Infernal	ncRNA	4525555	4525749	2.8e-28	+	.	ID=GCA000010485_04431;Name=Yersinia sRNA 276;locus_tag=GCA000010485_04431;product=Yersinia sRNA 276;Dbxref=RFAM:RF02850;Parent=GCA000010485_04431_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02850
contig_1	Pyrodigal	gene	4526595	4527674	.	+	.	ID=GCA000010485_04432_gene;locus_tag=GCA000010485_04432;gene=lptF
contig_1	Pyrodigal	CDS	4526595	4527674	.	+	0	ID=GCA000010485_04432;Name=LPS export ABC transporter permease LptF;locus_tag=GCA000010485_04432;product=LPS export ABC transporter permease LptF;Dbxref=GO:0015221,GO:0015920,GO:0043190,GO:0055085;gene=lptF;Parent=GCA000010485_04432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,SO:0001217,UniParc:UPI0001A5C100,UniRef:UniRef100_A0A024L703,UniRef:UniRef50_P0AF98,UniRef:UniRef90_P0AF98;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	4527674	4528756	.	+	.	ID=GCA000010485_04433_gene;locus_tag=GCA000010485_04433;gene=lptG
contig_1	Pyrodigal	CDS	4527674	4528756	.	+	0	ID=GCA000010485_04433;Name=LPS export ABC transporter permease LptG;locus_tag=GCA000010485_04433;product=LPS export ABC transporter permease LptG;Dbxref=GO:0005886,GO:0015221,GO:0015920,GO:0016020,GO:0043165,GO:0043190,GO:0055085,GO:1990351;gene=lptG;Parent=GCA000010485_04433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,RefSeq:WP_001295681.1,SO:0001217,UniParc:UPI000013B58B,UniRef:UniRef100_P0ADC6,UniRef:UniRef50_P0ADC6,UniRef:UniRef90_P0ADC6;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	4528917	4530419	.	-	.	ID=GCA000010485_04434_gene;locus_tag=GCA000010485_04434;gene=yjgR
contig_1	Pyrodigal	CDS	4528917	4530419	.	-	0	ID=GCA000010485_04434;Name=putative protein YjgR;locus_tag=GCA000010485_04434;product=putative protein YjgR;gene=yjgR;Parent=GCA000010485_04434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0433,COG:L,RefSeq:WP_001294547.1,SO:0001217,UniParc:UPI0001C22FC6,UniRef:UniRef100_UPI0001C22FC6,UniRef:UniRef50_P39342,UniRef:UniRef90_P39342
contig_1	Pyrodigal	gene	4530497	4531495	.	-	.	ID=GCA000010485_04435_gene;locus_tag=GCA000010485_04435;gene=idnR
contig_1	Pyrodigal	CDS	4530497	4531495	.	-	0	ID=GCA000010485_04435;Name=DNA-binding transcriptional regulator IdnR;locus_tag=GCA000010485_04435;product=DNA-binding transcriptional regulator IdnR;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0019521;gene=idnR;Parent=GCA000010485_04435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001309159,KEGG:K06146,RefSeq:WP_001309159.1,SO:0001217,UniParc:UPI000012D20D,UniRef:UniRef100_P39343,UniRef:UniRef50_P39343,UniRef:UniRef90_P39343
contig_1	Pyrodigal	gene	4531562	4532881	.	-	.	ID=GCA000010485_04436_gene;locus_tag=GCA000010485_04436;gene=idnT
contig_1	Pyrodigal	CDS	4531562	4532881	.	-	0	ID=GCA000010485_04436;Name=gnt-II system L-idonate transporter;locus_tag=GCA000010485_04436;product=gnt-II system L-idonate transporter;Dbxref=GO:0005886,GO:0008643,GO:0015128,GO:0015568,GO:0015726,GO:0019521,GO:0035429,GO:0046183;gene=idnT;Parent=GCA000010485_04436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001128335,COG:COG2610,COG:G,KEGG:K06157,RefSeq:WP_001128335.1,SO:0001217,UniParc:UPI000012D20E,UniRef:UniRef100_P39344,UniRef:UniRef50_P39344,UniRef:UniRef90_P39344
contig_1	Pyrodigal	gene	4532946	4533710	.	-	.	ID=GCA000010485_04437_gene;locus_tag=GCA000010485_04437;gene=idnO
contig_1	Pyrodigal	CDS	4532946	4533710	.	-	0	ID=GCA000010485_04437;Name=gluconate 5-dehydrogenase;locus_tag=GCA000010485_04437;product=gluconate 5-dehydrogenase;Dbxref=GO:0008874,GO:0042803,GO:0046183;gene=idnO;Parent=GCA000010485_04437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000998695.1,SO:0001217,UniParc:UPI000003EB3C,UniRef:UniRef100_P0A9P9,UniRef:UniRef50_P50199,UniRef:UniRef90_P0A9P9;ec_number=1.1.1.69
contig_1	Pyrodigal	gene	4533734	4534765	.	-	.	ID=GCA000010485_04438_gene;locus_tag=GCA000010485_04438;gene=idnD
contig_1	Pyrodigal	CDS	4533734	4534765	.	-	0	ID=GCA000010485_04438;Name=L-idonate 5-dehydrogenase;locus_tag=GCA000010485_04438;product=L-idonate 5-dehydrogenase;Dbxref=GO:0019521,GO:0046183,GO:0046872,GO:0050572,GO:0102198;gene=idnD;Parent=GCA000010485_04438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001197411,RefSeq:WP_001197414.1,SO:0001217,UniParc:UPI0001C22FC7,UniRef:UniRef100_A0A7I0KUN8,UniRef:UniRef50_P39346,UniRef:UniRef90_P39346;ec_number=1.1.1.264
contig_1	Pyrodigal	gene	4534982	4535545	.	+	.	ID=GCA000010485_04439_gene;locus_tag=GCA000010485_04439;gene=idnK
contig_1	Pyrodigal	CDS	4534982	4535545	.	+	0	ID=GCA000010485_04439;Name=gluconokinase;locus_tag=GCA000010485_04439;product=gluconokinase;Dbxref=GO:0005524,GO:0019521,GO:0046177,GO:0046183,GO:0046316;gene=idnK;Parent=GCA000010485_04439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000896741.1,SO:0001217,UniParc:UPI00005EF0BA,UniRef:UniRef100_A0A0K5II50,UniRef:UniRef50_P39208,UniRef:UniRef90_P39208;ec_number=2.7.1.12
contig_1	Pyrodigal	gene	4535549	4536568	.	-	.	ID=GCA000010485_04440_gene;locus_tag=GCA000010485_04440;gene=ahr
contig_1	Pyrodigal	CDS	4535549	4536568	.	-	0	ID=GCA000010485_04440;Name=NADPH-dependent aldehyde reductase Ahr;locus_tag=GCA000010485_04440;product=NADPH-dependent aldehyde reductase Ahr;Dbxref=GO:0006631,GO:0008106,GO:0008270,GO:0016616,GO:0042803;gene=ahr;Parent=GCA000010485_04440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001309160,COG:COG1064,COG:G,KEGG:K12957,RefSeq:WP_000061766.1,SO:0001217,UniParc:UPI00005EF0BB,UniRef:UniRef100_A0A086UUH8,UniRef:UniRef50_P27250,UniRef:UniRef90_P27250;ec_number=1.1.1.2
contig_1	tRNAscan-SE	gene	4536764	4536848	.	+	.	ID=GCA000010485_04441_gene;locus_tag=GCA000010485_04441;gene=trnL
contig_1	tRNAscan-SE	tRNA	4536764	4536848	.	+	.	ID=GCA000010485_04441;Name=tRNA-Leu(caa);locus_tag=GCA000010485_04441;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000010485_04441_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	4536998	4537924	.	-	.	ID=GCA000010485_04442_gene;locus_tag=GCA000010485_04442
contig_1	Pyrodigal	CDS	4536998	4537924	.	-	0	ID=GCA000010485_04442;Name=Tyr recombinase domain-containing protein;locus_tag=GCA000010485_04442;product=Tyr recombinase domain-containing protein;Parent=GCA000010485_04442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142491.1,SO:0001217,UniParc:UPI0001C22FC8,UniRef:UniRef100_A0A7I0L4P4,UniRef:UniRef50_A9MES8,UniRef:UniRef90_A9MES8
contig_1	Pyrodigal	gene	4537914	4539533	.	-	.	ID=GCA000010485_04443_gene;locus_tag=GCA000010485_04443;gene=mobH
contig_1	Pyrodigal	CDS	4537914	4539533	.	-	0	ID=GCA000010485_04443;Name=MobH family relaxase;locus_tag=GCA000010485_04443;product=MobH family relaxase;gene=mobH;Parent=GCA000010485_04443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12070,RefSeq:WP_001223819.1,SO:0001217,UniParc:UPI0001887DDF,UniRef:UniRef100_B7LDP5,UniRef:UniRef50_D2TNZ2,UniRef:UniRef90_D2TNZ2
contig_1	Pyrodigal	gene	4539836	4540747	.	-	.	ID=GCA000010485_04444_gene;locus_tag=GCA000010485_04444;gene=traC
contig_1	Pyrodigal	CDS	4539836	4540747	.	-	0	ID=GCA000010485_04444;Name=DNA primase TraC;locus_tag=GCA000010485_04444;product=DNA primase TraC;gene=traC;Parent=GCA000010485_04444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001082109.1,SO:0001217,UniParc:UPI00019AF939,UniRef:UniRef100_A0A0K6DY43,UniRef:UniRef50_W7P7K0,UniRef:UniRef90_W7P7K0
contig_1	Pyrodigal	gene	4540833	4541126	.	-	.	ID=GCA000010485_04445_gene;locus_tag=GCA000010485_04445
contig_1	Pyrodigal	CDS	4540833	4541126	.	-	0	ID=GCA000010485_04445;Name=hypothetical protein;locus_tag=GCA000010485_04445;product=hypothetical protein;Parent=GCA000010485_04445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001143292.1,SO:0001217,UniParc:UPI0001F081E4,UniRef:UniRef100_A0A086TZP1,UniRef:UniRef50_D2TNZ4,UniRef:UniRef90_A9MES5
contig_1	Pyrodigal	gene	4541494	4542366	.	-	.	ID=GCA000010485_04446_gene;locus_tag=GCA000010485_04446
contig_1	Pyrodigal	CDS	4541494	4542366	.	-	0	ID=GCA000010485_04446;Name=phosphorothioated DNA-binding restriction endonuclease;locus_tag=GCA000010485_04446;product=phosphorothioated DNA-binding restriction endonuclease;Dbxref=GO:0009307,GO:0015666;Parent=GCA000010485_04446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07454,RefSeq:WP_000202280.1,SO:0001217,UniParc:UPI0001C22FC9,UniRef:UniRef100_A0A7I0KUR9,UniRef:UniRef50_S5NGD2,UniRef:UniRef90_D2TP30
contig_1	Pyrodigal	gene	4542611	4544434	.	-	.	ID=GCA000010485_04447_gene;locus_tag=GCA000010485_04447
contig_1	Pyrodigal	CDS	4542611	4544434	.	-	0	ID=GCA000010485_04447;Name=Response receiver domain-containing protein;locus_tag=GCA000010485_04447;product=Response receiver domain-containing protein;Parent=GCA000010485_04447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000886597.1,SO:0001217,UniParc:UPI0001C22FCA,UniRef:UniRef100_A0A0K6DXD8,UniRef:UniRef50_A9KXY6,UniRef:UniRef90_A0A6D2GD29
contig_1	Pyrodigal	gene	4544427	4547396	.	-	.	ID=GCA000010485_04448_gene;locus_tag=GCA000010485_04448
contig_1	Pyrodigal	CDS	4544427	4547396	.	-	0	ID=GCA000010485_04448;Name=Histidine kinase;locus_tag=GCA000010485_04448;product=Histidine kinase;Parent=GCA000010485_04448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000236931.1,SO:0001217,UniParc:UPI0001C22FCB,UniRef:UniRef100_A0A0K4S1V2,UniRef:UniRef50_A0AAQ2Y034,UniRef:UniRef90_A0A0K4S1V2
contig_1	Pyrodigal	gene	4547490	4548686	.	-	.	ID=GCA000010485_04449_gene;locus_tag=GCA000010485_04449
contig_1	Pyrodigal	CDS	4547490	4548686	.	-	0	ID=GCA000010485_04449;Name=Cytosine-specific methyltransferase;locus_tag=GCA000010485_04449;product=Cytosine-specific methyltransferase;Parent=GCA000010485_04449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00558,RefSeq:WP_000643690.1,SO:0001217,UniParc:UPI0001C22FCC,UniRef:UniRef100_A0A0K4ABV6,UniRef:UniRef50_A0A0K4ABV6,UniRef:UniRef90_A0A0K4ABV6;ec_number=2.1.1.37
contig_1	Pyrodigal	gene	4548959	4549555	.	-	.	ID=GCA000010485_04450_gene;locus_tag=GCA000010485_04450
contig_1	Pyrodigal	CDS	4548959	4549555	.	-	0	ID=GCA000010485_04450;Name=hypothetical protein;locus_tag=GCA000010485_04450;product=hypothetical protein;Parent=GCA000010485_04450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000642945.1,SO:0001217,UniParc:UPI00019AF967,UniRef:UniRef100_A0A2W0GYP5,UniRef:UniRef50_A0A2W0GYP5,UniRef:UniRef90_A0A2W0GYP5
contig_1	Pyrodigal	gene	4549631	4550530	.	+	.	ID=GCA000010485_04451_gene;locus_tag=GCA000010485_04451;gene=tnp
contig_1	Pyrodigal	CDS	4549631	4550530	.	+	0	ID=GCA000010485_04451;Name=IS630 family transposase;locus_tag=GCA000010485_04451;product=IS630 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H2VDP9,UniRef:UniRef90_A0A0H2VDP9
contig_1	Pyrodigal	gene	4550514	4551038	.	-	.	ID=GCA000010485_04452_gene;locus_tag=GCA000010485_04452;gene=secA
contig_1	Pyrodigal	CDS	4550514	4551038	.	-	0	ID=GCA000010485_04452;Name=Preprotein translocase subunit SecA;locus_tag=GCA000010485_04452;product=Preprotein translocase subunit SecA;gene=secA;Parent=GCA000010485_04452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000259956.1,SO:0001217,UniParc:UPI0002A24D52,UniRef:UniRef100_UPI0010CC09B5,UniRef:UniRef50_A0A2X1L4T3,UniRef:UniRef90_A0A8B3KJ79
contig_1	Pyrodigal	gene	4551038	4551172	.	-	.	ID=GCA000010485_04453_gene;locus_tag=GCA000010485_04453
contig_1	Pyrodigal	CDS	4551038	4551172	.	-	0	ID=GCA000010485_04453;Name=hypothetical protein;locus_tag=GCA000010485_04453;product=hypothetical protein;Parent=GCA000010485_04453_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	4552974	4554050	.	+	.	ID=GCA000010485_04454_gene;locus_tag=GCA000010485_04454;gene=fic
contig_1	Pyrodigal	CDS	4552974	4554050	.	+	0	ID=GCA000010485_04454;Name=protein adenylyltransferase Fic;locus_tag=GCA000010485_04454;product=protein adenylyltransferase Fic;Dbxref=GO:0018117,GO:0042803,GO:0070733;gene=fic;Parent=GCA000010485_04454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001104341.1,SO:0001217,UniParc:UPI0001887DE9,UniRef:UniRef100_A0A086TZN6,UniRef:UniRef50_Q9K0V1,UniRef:UniRef90_A0A2X2GXC2;ec_number=2.7.7.108
contig_1	Pyrodigal	gene	4554101	4554730	.	-	.	ID=GCA000010485_04455_gene;locus_tag=GCA000010485_04455
contig_1	Pyrodigal	CDS	4554101	4554730	.	-	0	ID=GCA000010485_04455;Name=hypothetical protein;locus_tag=GCA000010485_04455;product=hypothetical protein;Parent=GCA000010485_04455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000729465.1,SO:0001217,UniParc:UPI0001887DEA,UniRef:UniRef100_A0A086UUI8,UniRef:UniRef50_A0A086UUI8,UniRef:UniRef90_A0A086UUI8
contig_1	Pyrodigal	gene	4555176	4555469	.	+	.	ID=GCA000010485_04456_gene;locus_tag=GCA000010485_04456
contig_1	Pyrodigal	CDS	4555176	4555469	.	+	0	ID=GCA000010485_04456;Name=Insertion element protein;locus_tag=GCA000010485_04456;product=Insertion element protein;Parent=GCA000010485_04456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377WKH9,UniRef:UniRef90_A0A377WKH9
contig_1	Pyrodigal	gene	4555641	4556465	.	-	.	ID=GCA000010485_04457_gene;locus_tag=GCA000010485_04457;gene=rpiR
contig_1	Pyrodigal	CDS	4555641	4556465	.	-	0	ID=GCA000010485_04457;Name=Transcriptional regulator;locus_tag=GCA000010485_04457;product=Transcriptional regulator;gene=rpiR;Parent=GCA000010485_04457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_001114712.1,SO:0001217,UniParc:UPI0001887DF4,UniRef:UniRef100_A0A086UTL5,UniRef:UniRef50_A7MJ71,UniRef:UniRef90_A0A0J1LT43
contig_1	Pyrodigal	gene	4556631	4558187	.	+	.	ID=GCA000010485_04458_gene;locus_tag=GCA000010485_04458;gene=ptsG2
contig_1	Pyrodigal	CDS	4556631	4558187	.	+	0	ID=GCA000010485_04458;Name=PTS glucose transporter subunit IIB;locus_tag=GCA000010485_04458;product=PTS glucose transporter subunit IIB;gene=ptsG2;Parent=GCA000010485_04458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_001351184.1,SO:0001217,UniParc:UPI00019AF96D,UniRef:UniRef100_A0A0G9G6Y5,UniRef:UniRef50_A0A0G9G6Y5,UniRef:UniRef90_A0A0G9G6Y5
contig_1	Pyrodigal	gene	4558187	4558876	.	+	.	ID=GCA000010485_04459_gene;locus_tag=GCA000010485_04459
contig_1	Pyrodigal	CDS	4558187	4558876	.	+	0	ID=GCA000010485_04459;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000010485_04459;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Parent=GCA000010485_04459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000859648.1,SO:0001217,UniParc:UPI0001887DF6,UniRef:UniRef100_A0A086TW30,UniRef:UniRef50_O51589,UniRef:UniRef90_A0A3P5DHU0
contig_1	Pyrodigal	gene	4560437	4560730	.	-	.	ID=GCA000010485_04460_gene;locus_tag=GCA000010485_04460
contig_1	Pyrodigal	CDS	4560437	4560730	.	-	0	ID=GCA000010485_04460;Name=Transposase%2C IS110 family;locus_tag=GCA000010485_04460;product=Transposase%2C IS110 family;Parent=GCA000010485_04460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019AF96F,UniRef:UniRef100_A0A0G9G336,UniRef:UniRef50_A0A2X1J741,UniRef:UniRef90_A0A2X1J741
contig_1	Pyrodigal	gene	4561122	4562153	.	-	.	ID=GCA000010485_04461_gene;locus_tag=GCA000010485_04461
contig_1	Pyrodigal	CDS	4561122	4562153	.	-	0	ID=GCA000010485_04461;Name=HTH lacI-type domain-containing protein;locus_tag=GCA000010485_04461;product=HTH lacI-type domain-containing protein;Parent=GCA000010485_04461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000416151.1,SO:0001217,UniParc:UPI0001887DFD,UniRef:UniRef100_A0A086UTM2,UniRef:UniRef50_Q93SD9,UniRef:UniRef90_Q93SD9
contig_1	Pyrodigal	gene	4562424	4562867	.	+	.	ID=GCA000010485_04462_gene;locus_tag=GCA000010485_04462
contig_1	Pyrodigal	CDS	4562424	4562867	.	+	0	ID=GCA000010485_04462;Name=PTS system EIIA component;locus_tag=GCA000010485_04462;product=PTS system EIIA component;Parent=GCA000010485_04462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000916805.1,SO:0001217,UniParc:UPI0001887DFE,UniRef:UniRef100_A0A086TW24,UniRef:UniRef50_A0A086TW24,UniRef:UniRef90_A0A086TW24
contig_1	Pyrodigal	gene	4562883	4563170	.	+	.	ID=GCA000010485_04463_gene;locus_tag=GCA000010485_04463
contig_1	Pyrodigal	CDS	4562883	4563170	.	+	0	ID=GCA000010485_04463;Name=Ascorbate-specific PTS system EIIB component;locus_tag=GCA000010485_04463;product=Ascorbate-specific PTS system EIIB component;Parent=GCA000010485_04463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705930.1,SO:0001217,UniParc:UPI0001887DFF,UniRef:UniRef100_A0A086UTM4,UniRef:UniRef50_A0A086UTM4,UniRef:UniRef90_A0A086UTM4
contig_1	Pyrodigal	gene	4563183	4564439	.	+	.	ID=GCA000010485_04464_gene;locus_tag=GCA000010485_04464;gene=ulaA
contig_1	Pyrodigal	CDS	4563183	4564439	.	+	0	ID=GCA000010485_04464;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA000010485_04464;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0009401;gene=ulaA;Parent=GCA000010485_04464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3037,COG:G,KEGG:K03475,RefSeq:WP_000345347.1,SO:0001217,UniParc:UPI00000B3AC7,UniRef:UniRef100_Q93SD8,UniRef:UniRef50_Q93SD8,UniRef:UniRef90_Q93SD8
contig_1	Pyrodigal	gene	4564686	4564940	.	-	.	ID=GCA000010485_04465_gene;locus_tag=GCA000010485_04465
contig_1	Pyrodigal	CDS	4564686	4564940	.	-	0	ID=GCA000010485_04465;Name=Transposase;locus_tag=GCA000010485_04465;product=Transposase;Parent=GCA000010485_04465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001327567.1,SO:0001217,UniParc:UPI0000043AA5,UniRef:UniRef100_A0A0G9G341,UniRef:UniRef50_Q9AI25,UniRef:UniRef90_Q9AI25
contig_1	Pyrodigal	gene	4565362	4566375	.	-	.	ID=GCA000010485_04466_gene;locus_tag=GCA000010485_04466
contig_1	Pyrodigal	CDS	4565362	4566375	.	-	0	ID=GCA000010485_04466;Name=Aldose 1-epimerase family protein;locus_tag=GCA000010485_04466;product=Aldose 1-epimerase family protein;Parent=GCA000010485_04466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000107474.1,SO:0001217,UniParc:UPI0000043AA6,UniRef:UniRef100_A0A067HEN7,UniRef:UniRef50_A0A0R2MDT8,UniRef:UniRef90_A0A836N6D5
contig_1	Pyrodigal	gene	4566387	4567703	.	-	.	ID=GCA000010485_04467_gene;locus_tag=GCA000010485_04467;gene=fucP
contig_1	Pyrodigal	CDS	4566387	4567703	.	-	0	ID=GCA000010485_04467;Name=L-fucose:H+ symporter permease;locus_tag=GCA000010485_04467;product=L-fucose:H+ symporter permease;Dbxref=GO:0015150,GO:0015535,GO:0015756;gene=fucP;Parent=GCA000010485_04467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0738,COG:G,KEGG:K02429,RefSeq:WP_000998350.1,SO:0001217,UniParc:UPI000042BC9A,UniRef:UniRef100_Q67FX6,UniRef:UniRef50_Q67FX6,UniRef:UniRef90_Q67FX6
contig_1	Pyrodigal	gene	4567731	4568651	.	-	.	ID=GCA000010485_04468_gene;locus_tag=GCA000010485_04468;gene=rbsK
contig_1	Pyrodigal	CDS	4567731	4568651	.	-	0	ID=GCA000010485_04468;Name=ribokinase;locus_tag=GCA000010485_04468;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0046872;gene=rbsK;Parent=GCA000010485_04468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_000350265.1,SO:0001217,UniParc:UPI0000043AA8,UniRef:UniRef100_Q707I2,UniRef:UniRef50_Q7CPF5,UniRef:UniRef90_Q7CPF5;ec_number=2.7.1.229
contig_1	Pyrodigal	gene	4568957	4569739	.	+	.	ID=GCA000010485_04469_gene;locus_tag=GCA000010485_04469
contig_1	Pyrodigal	CDS	4568957	4569739	.	+	0	ID=GCA000010485_04469;Name=Transcriptional regulator;locus_tag=GCA000010485_04469;product=Transcriptional regulator;Parent=GCA000010485_04469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11534,RefSeq:WP_001295538.1,SO:0001217,UniParc:UPI000042BC99,UniRef:UniRef100_Q67FX0,UniRef:UniRef50_Q67FX0,UniRef:UniRef90_Q67FX0
contig_1	Pyrodigal	gene	4570904	4572262	.	+	.	ID=GCA000010485_04470_gene;locus_tag=GCA000010485_04470
contig_1	Pyrodigal	CDS	4570904	4572262	.	+	0	ID=GCA000010485_04470;Name=Phytase-like domain-containing protein;locus_tag=GCA000010485_04470;product=Phytase-like domain-containing protein;Parent=GCA000010485_04470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4222,COG:S,RefSeq:WP_000823249.1,SO:0001217,UniParc:UPI0001C22EF1,UniRef:UniRef100_A0A7I0L4M6,UniRef:UniRef50_E0SF29,UniRef:UniRef90_Q328Q5
contig_1	Pyrodigal	gene	4572501	4573919	.	-	.	ID=GCA000010485_04471_gene;locus_tag=GCA000010485_04471;gene=tnpC
contig_1	Pyrodigal	CDS	4572501	4573919	.	-	0	ID=GCA000010485_04471;Name=IS66 family transposase;locus_tag=GCA000010485_04471;product=IS66 family transposase;Dbxref=GO:0004803;gene=tnpC;Parent=GCA000010485_04471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7U9J2D8,UniRef:UniRef90_UPI0022DF0F2E
contig_1	Pyrodigal	gene	4573935	4574282	.	-	.	ID=GCA000010485_04472_gene;locus_tag=GCA000010485_04472;gene=tnpB
contig_1	Pyrodigal	CDS	4573935	4574282	.	-	0	ID=GCA000010485_04472;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_04472;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_04472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3436,COG:X,RefSeq:WP_000612632.1,SO:0001217,UniParc:UPI00000BB15B,UniRef:UniRef100_A0A0H0QSB6,UniRef:UniRef50_Q3YYX2,UniRef:UniRef90_Q3YYX2
contig_1	Pyrodigal	gene	4574279	4574659	.	-	.	ID=GCA000010485_04473_gene;locus_tag=GCA000010485_04473;gene=tnpA
contig_1	Pyrodigal	CDS	4574279	4574659	.	-	0	ID=GCA000010485_04473;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_04473;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_04473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001171523.1,SO:0001217,UniParc:UPI0001B5AB21,UniRef:UniRef100_J7R9K6,UniRef:UniRef50_Q8X4J4,UniRef:UniRef90_J7R9K6
contig_1	Pyrodigal	gene	4574778	4575014	.	-	.	ID=GCA000010485_04474_gene;locus_tag=GCA000010485_04474
contig_1	Pyrodigal	CDS	4574778	4575014	.	-	0	ID=GCA000010485_04474;Name=hypothetical protein;locus_tag=GCA000010485_04474;product=hypothetical protein;Parent=GCA000010485_04474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00017B8E42,UniRef:UniRef100_A0A0J1WMH6,UniRef:UniRef50_A0A0E2KXY2,UniRef:UniRef90_A0A0E2KXY2
contig_1	Pyrodigal	gene	4575014	4575448	.	-	.	ID=GCA000010485_04475_gene;locus_tag=GCA000010485_04475
contig_1	Pyrodigal	CDS	4575014	4575448	.	-	0	ID=GCA000010485_04475;Name=DNA-directed RNA polymerase%2C beta subunit/140 kD subunit;locus_tag=GCA000010485_04475;product=DNA-directed RNA polymerase%2C beta subunit/140 kD subunit;Parent=GCA000010485_04475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001221615.1,SO:0001217,UniParc:UPI00015C4EC6,UniRef:UniRef100_J7RCL5,UniRef:UniRef50_Q5K5T4,UniRef:UniRef90_Q5K5T4
contig_1	Pyrodigal	gene	4575436	4575837	.	-	.	ID=GCA000010485_04476_gene;locus_tag=GCA000010485_04476
contig_1	Pyrodigal	CDS	4575436	4575837	.	-	0	ID=GCA000010485_04476;Name=Ybl85;locus_tag=GCA000010485_04476;product=Ybl85;Parent=GCA000010485_04476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000270971.1,SO:0001217,UniParc:UPI0001DD2F38,UniRef:UniRef100_A0A086TT27,UniRef:UniRef50_Q5K5T3,UniRef:UniRef90_A0A3P5DK22
contig_1	Pyrodigal	gene	4576097	4576666	.	-	.	ID=GCA000010485_04477_gene;locus_tag=GCA000010485_04477
contig_1	Pyrodigal	CDS	4576097	4576666	.	-	0	ID=GCA000010485_04477;Name=Inovirus Gp2 family protein;locus_tag=GCA000010485_04477;product=Inovirus Gp2 family protein;Parent=GCA000010485_04477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000148639.1,SO:0001217,UniParc:UPI0001C22EF3,UniRef:UniRef100_A0A7I0KUN4,UniRef:UniRef50_S1P0C7,UniRef:UniRef90_A0A7I0KUN4
contig_1	Pyrodigal	gene	4576870	4577067	.	+	.	ID=GCA000010485_04478_gene;locus_tag=GCA000010485_04478
contig_1	Pyrodigal	CDS	4576870	4577067	.	+	0	ID=GCA000010485_04478;Name=Zinc ribbon domain-containing protein;locus_tag=GCA000010485_04478;product=Zinc ribbon domain-containing protein;Parent=GCA000010485_04478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545803.1,SO:0001217,UniParc:UPI0002A1EDD3,UniRef:UniRef100_A0A2R3NI20,UniRef:UniRef50_A0A7A6VXA4,UniRef:UniRef90_A0A2A7U6L7
contig_1	Pyrodigal	gene	4577410	4577622	.	-	.	ID=GCA000010485_04479_gene;locus_tag=GCA000010485_04479
contig_1	Pyrodigal	CDS	4577410	4577622	.	-	0	ID=GCA000010485_04479;Name=Hemolysin expression modulating protein;locus_tag=GCA000010485_04479;product=Hemolysin expression modulating protein;Parent=GCA000010485_04479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05839,RefSeq:WP_000453334.1,SO:0001217,UniParc:UPI0001C22EF4,UniRef:UniRef100_A0A1M2FZ10,UniRef:UniRef50_A0A2T3SVB0,UniRef:UniRef90_A0A1M2FZ10
contig_1	Pyrodigal	gene	4578330	4578536	.	+	.	ID=GCA000010485_04480_gene;locus_tag=GCA000010485_04480;gene=alpA
contig_1	Pyrodigal	CDS	4578330	4578536	.	+	0	ID=GCA000010485_04480;Name=AlpA family transcriptional regulator;locus_tag=GCA000010485_04480;product=AlpA family transcriptional regulator;gene=alpA;Parent=GCA000010485_04480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000211310.1,SO:0001217,UniParc:UPI000035E928,UniRef:UniRef100_A0AAI8E4E9,UniRef:UniRef50_A0A2A2XJW8,UniRef:UniRef90_A0A2A2XJW8
contig_1	Pyrodigal	gene	4578631	4579233	.	+	.	ID=GCA000010485_04481_gene;locus_tag=GCA000010485_04481
contig_1	Pyrodigal	CDS	4578631	4579233	.	+	0	ID=GCA000010485_04481;Name=Aec62;locus_tag=GCA000010485_04481;product=Aec62;Parent=GCA000010485_04481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001387788.1,SO:0001217,UniParc:UPI0001C22EF5,UniRef:UniRef100_A0AAI8H4M1,UniRef:UniRef50_Q5K5T0,UniRef:UniRef90_Q5K5T0
contig_1	Pyrodigal	gene	4579966	4580178	.	+	.	ID=GCA000010485_04482_gene;locus_tag=GCA000010485_04482;gene=istB
contig_1	Pyrodigal	CDS	4579966	4580178	.	+	0	ID=GCA000010485_04482;Name=IstB ATP binding domain-containing protein;locus_tag=GCA000010485_04482;product=IstB ATP binding domain-containing protein;gene=istB;Parent=GCA000010485_04482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C22EF6,UniRef:UniRef100_A0A1M0NBA2,UniRef:UniRef50_A0A1M0NBA2,UniRef:UniRef90_A0A1M0NBA2
contig_1	Pyrodigal	gene	4581821	4582693	.	+	.	ID=GCA000010485_04483_gene;locus_tag=GCA000010485_04483
contig_1	Pyrodigal	CDS	4581821	4582693	.	+	0	ID=GCA000010485_04483;Name=Primase C-terminal 1 domain-containing protein;locus_tag=GCA000010485_04483;product=Primase C-terminal 1 domain-containing protein;Parent=GCA000010485_04483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000241617.1,SO:0001217,UniParc:UPI0001C22EF7,UniRef:UniRef100_A0A1M0KU02,UniRef:UniRef50_A0A9X9BY54,UniRef:UniRef90_A0A1M0KU02
contig_1	Pyrodigal	gene	4582792	4583664	.	+	.	ID=GCA000010485_04484_gene;locus_tag=GCA000010485_04484
contig_1	Pyrodigal	CDS	4582792	4583664	.	+	0	ID=GCA000010485_04484;Name=G domain-containing protein;locus_tag=GCA000010485_04484;product=G domain-containing protein;Parent=GCA000010485_04484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001069743.1,SO:0001217,UniParc:UPI00019AF91B,UniRef:UniRef100_A0A2W0HAF4,UniRef:UniRef50_A0A0H2V1W7,UniRef:UniRef90_A0A0H2V1W7
contig_1	Pyrodigal	gene	4584036	4585013	.	+	.	ID=GCA000010485_04485_gene;locus_tag=GCA000010485_04485
contig_1	Pyrodigal	CDS	4584036	4585013	.	+	0	ID=GCA000010485_04485;Name=Antigen 43%2C truncation;locus_tag=GCA000010485_04485;product=Antigen 43%2C truncation;Parent=GCA000010485_04485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000820583.1,SO:0001217,UniParc:UPI0001C22EF8,UniRef:UniRef100_UPI0001C22EF8,UniRef:UniRef50_A0A447Y4B2,UniRef:UniRef90_A0A376U1S0
contig_1	Pyrodigal	gene	4585071	4585817	.	-	.	ID=GCA000010485_04486_gene;locus_tag=GCA000010485_04486;gene=istB
contig_1	Pyrodigal	CDS	4585071	4585817	.	-	0	ID=GCA000010485_04486;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_04486;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_04486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_1	Pyrodigal	gene	4585832	4587373	.	-	.	ID=GCA000010485_04487_gene;locus_tag=GCA000010485_04487;gene=tnp
contig_1	Pyrodigal	CDS	4585832	4587373	.	-	0	ID=GCA000010485_04487;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_04487;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_1	Pyrodigal	gene	4587618	4589468	.	+	.	ID=GCA000010485_04488_gene;locus_tag=GCA000010485_04488
contig_1	Pyrodigal	CDS	4587618	4589468	.	+	0	ID=GCA000010485_04488;Name=Ag43/Cah family autotransporter adhesin;locus_tag=GCA000010485_04488;product=Ag43/Cah family autotransporter adhesin;Parent=GCA000010485_04488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAN3V995,UniRef:UniRef90_UPI0023B1F53E
contig_1	Pyrodigal	gene	4589539	4589697	.	+	.	ID=GCA000010485_04489_gene;locus_tag=GCA000010485_04489
contig_1	Pyrodigal	CDS	4589539	4589697	.	+	0	ID=GCA000010485_04489;Name=DUF905 domain-containing protein;locus_tag=GCA000010485_04489;product=DUF905 domain-containing protein;Parent=GCA000010485_04489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001323397.1,SO:0001217,UniParc:UPI00005F0036,UniRef:UniRef100_A0A066SWS3,UniRef:UniRef50_A0A066SWS3,UniRef:UniRef90_A0A066SWS3
contig_1	Pyrodigal	gene	4589852	4590670	.	+	.	ID=GCA000010485_04490_gene;locus_tag=GCA000010485_04490
contig_1	Pyrodigal	CDS	4589852	4590670	.	+	0	ID=GCA000010485_04490;Name=Aec71;locus_tag=GCA000010485_04490;product=Aec71;Parent=GCA000010485_04490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001234712.1,SO:0001217,UniParc:UPI0001C22EFA,UniRef:UniRef100_A0A7I0KUM5,UniRef:UniRef50_Q6KD15,UniRef:UniRef90_Q6KD15
contig_1	Pyrodigal	gene	4591012	4591476	.	+	.	ID=GCA000010485_04491_gene;locus_tag=GCA000010485_04491
contig_1	Pyrodigal	CDS	4591012	4591476	.	+	0	ID=GCA000010485_04491;Name=Antirestriction protein;locus_tag=GCA000010485_04491;product=Antirestriction protein;Parent=GCA000010485_04491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000855061.1,SO:0001217,UniParc:UPI000245E831,UniRef:UniRef100_A0A7I0KUJ4,UniRef:UniRef50_A0A1D7PD15,UniRef:UniRef90_A0A0E0Y237
contig_1	Pyrodigal	gene	4591492	4591968	.	+	.	ID=GCA000010485_04492_gene;locus_tag=GCA000010485_04492;gene=radC
contig_1	Pyrodigal	CDS	4591492	4591968	.	+	0	ID=GCA000010485_04492;Name=DNA repair protein RadC;locus_tag=GCA000010485_04492;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281;gene=radC;Parent=GCA000010485_04492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2003,COG:L,KEGG:K03630,RefSeq:WP_001186779.1,SO:0001217,UniParc:UPI0001C22EFB,UniRef:UniRef100_A0A7I0KUJ3,UniRef:UniRef50_Q8GA16,UniRef:UniRef90_Q8GA16
contig_1	Pyrodigal	gene	4592031	4592252	.	+	.	ID=GCA000010485_04493_gene;locus_tag=GCA000010485_04493
contig_1	Pyrodigal	CDS	4592031	4592252	.	+	0	ID=GCA000010485_04493;Name=CP4-44 prophage;locus_tag=GCA000010485_04493;product=CP4-44 prophage;Parent=GCA000010485_04493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001220314.1,SO:0001217,UniParc:UPI00000D00AD,UniRef:UniRef100_A0A0D7CA89,UniRef:UniRef50_V5Z6G6,UniRef:UniRef90_A0A085PAY4
contig_1	Pyrodigal	gene	4592252	4592365	.	+	.	ID=GCA000010485_04494_gene;locus_tag=GCA000010485_04494
contig_1	Pyrodigal	CDS	4592252	4592365	.	+	0	ID=GCA000010485_04494;Name=Phage tail protein;locus_tag=GCA000010485_04494;product=Phage tail protein;Parent=GCA000010485_04494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D0F0E,UniRef:UniRef100_A0A0B0VVX9,UniRef:UniRef50_A0AA36PCR9,UniRef:UniRef90_A0A0B0VVX9
contig_1	Pyrodigal	gene	4592415	4592783	.	+	.	ID=GCA000010485_04495_gene;locus_tag=GCA000010485_04495;gene=yeeU
contig_1	Pyrodigal	CDS	4592415	4592783	.	+	0	ID=GCA000010485_04495;Name=Type IV toxin-antitoxin system YeeU family antitoxin;locus_tag=GCA000010485_04495;product=Type IV toxin-antitoxin system YeeU family antitoxin;gene=yeeU;Parent=GCA000010485_04495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18838,RefSeq:WP_001280950.1,SO:0001217,UniParc:UPI0001C22EFC,UniRef:UniRef100_A0A7I0L4L4,UniRef:UniRef50_A0A376W550,UniRef:UniRef90_A0A454A9R1
contig_1	Pyrodigal	gene	4592872	4593249	.	+	.	ID=GCA000010485_04496_gene;locus_tag=GCA000010485_04496
contig_1	Pyrodigal	CDS	4592872	4593249	.	+	0	ID=GCA000010485_04496;Name=Toxin;locus_tag=GCA000010485_04496;product=Toxin;Parent=GCA000010485_04496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18837,RefSeq:WP_000854770.1,SO:0001217,UniParc:UPI00019AF941,UniRef:UniRef100_A0A7I0KUQ0,UniRef:UniRef50_Q5I3I9,UniRef:UniRef90_A0A7I0KUQ0
contig_1	Pyrodigal	gene	4593246	4593734	.	+	.	ID=GCA000010485_04497_gene;locus_tag=GCA000010485_04497
contig_1	Pyrodigal	CDS	4593246	4593734	.	+	0	ID=GCA000010485_04497;Name=Aec77;locus_tag=GCA000010485_04497;product=Aec77;Parent=GCA000010485_04497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000761690.1,SO:0001217,UniParc:UPI00019AF942,UniRef:UniRef100_A0A0J1YMU2,UniRef:UniRef50_Q5K5R7,UniRef:UniRef90_A0A0J1WJ71
contig_1	Pyrodigal	gene	4594030	4594185	.	+	.	ID=GCA000010485_04498_gene;locus_tag=GCA000010485_04498
contig_1	Pyrodigal	CDS	4594030	4594185	.	+	0	ID=GCA000010485_04498;Name=Restriction methylase;locus_tag=GCA000010485_04498;product=Restriction methylase;Parent=GCA000010485_04498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000176AF53,UniRef:UniRef100_A0A6L9ABD2,UniRef:UniRef50_A0A7B2J7H3,UniRef:UniRef90_A0A6L9ABD2
contig_1	Pyrodigal	gene	4594549	4594974	.	+	.	ID=GCA000010485_04499_gene;locus_tag=GCA000010485_04499
contig_1	Pyrodigal	CDS	4594549	4594974	.	+	0	ID=GCA000010485_04499;Name=Transposase;locus_tag=GCA000010485_04499;product=Transposase;Parent=GCA000010485_04499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019AF945,UniRef:UniRef100_A0A8S0G2D9,UniRef:UniRef50_A0A8S0G2D9,UniRef:UniRef90_A0A8S0G2D9
contig_1	Pyrodigal	gene	4595516	4597138	.	+	.	ID=GCA000010485_04500_gene;locus_tag=GCA000010485_04500
contig_1	Pyrodigal	CDS	4595516	4597138	.	+	0	ID=GCA000010485_04500;Name=Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase;locus_tag=GCA000010485_04500;product=Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase;Parent=GCA000010485_04500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295726.1,SO:0001217,UniParc:UPI000245E7AF,UniRef:UniRef100_Q8RNY5,UniRef:UniRef50_Q8RNY5,UniRef:UniRef90_Q8RNY5;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	4597131	4598321	.	+	.	ID=GCA000010485_04501_gene;locus_tag=GCA000010485_04501
contig_1	Pyrodigal	CDS	4597131	4598321	.	+	0	ID=GCA000010485_04501;Name=DNA (cytosine-5-)-methyltransferase;locus_tag=GCA000010485_04501;product=DNA (cytosine-5-)-methyltransferase;Parent=GCA000010485_04501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295727.1,SO:0001217,UniParc:UPI00000B2B29,UniRef:UniRef100_Q8RNY6,UniRef:UniRef50_Q8RNY6,UniRef:UniRef90_Q8RNY6
contig_1	Pyrodigal	gene	4598334	4600073	.	-	.	ID=GCA000010485_04502_gene;locus_tag=GCA000010485_04502
contig_1	Pyrodigal	CDS	4598334	4600073	.	-	0	ID=GCA000010485_04502;Name=Alw26I/Eco31I/Esp3I family type II restriction endonuclease;locus_tag=GCA000010485_04502;product=Alw26I/Eco31I/Esp3I family type II restriction endonuclease;Dbxref=GO:0004520,GO:0009307;Parent=GCA000010485_04502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000781649.1,SO:0001217,UniParc:UPI000049E609,UniRef:UniRef100_Q8RNY7,UniRef:UniRef50_Q8RNY7,UniRef:UniRef90_Q8RNY7;ec_number=3.1.21.4
contig_1	Pyrodigal	gene	4600183	4601469	.	-	.	ID=GCA000010485_04503_gene;locus_tag=GCA000010485_04503;gene=mcrC
contig_1	Pyrodigal	CDS	4600183	4601469	.	-	0	ID=GCA000010485_04503;Name=Restriction endonuclease;locus_tag=GCA000010485_04503;product=Restriction endonuclease;gene=mcrC;Parent=GCA000010485_04503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4268,COG:V,KEGG:K19147,RefSeq:WP_000504875.1,SO:0001217,UniParc:UPI00019AF948,UniRef:UniRef100_J7RCM5,UniRef:UniRef50_A0A0H3MXC5,UniRef:UniRef90_A0A0H3MXC5
contig_1	Pyrodigal	gene	4601462	4603537	.	-	.	ID=GCA000010485_04504_gene;locus_tag=GCA000010485_04504
contig_1	Pyrodigal	CDS	4601462	4603537	.	-	0	ID=GCA000010485_04504;Name=5-methylcytosine-specific restriction enzyme with GTPase activity;locus_tag=GCA000010485_04504;product=5-methylcytosine-specific restriction enzyme with GTPase activity;Parent=GCA000010485_04504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366620.1,SO:0001217,UniParc:UPI00019AF949,UniRef:UniRef100_J7QZE9,UniRef:UniRef50_W0LGB6,UniRef:UniRef90_B7LQZ5
contig_1	Pyrodigal	gene	4604641	4604895	.	-	.	ID=GCA000010485_04505_gene;locus_tag=GCA000010485_04505
contig_1	Pyrodigal	CDS	4604641	4604895	.	-	0	ID=GCA000010485_04505;Name=Glycosyltransferase;locus_tag=GCA000010485_04505;product=Glycosyltransferase;Parent=GCA000010485_04505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000788354.1,SO:0001217,UniParc:UPI00019AF94A,UniRef:UniRef100_J7QJY5,UniRef:UniRef50_A0A8B3UZW0,UniRef:UniRef90_J7QJY5
contig_1	Pyrodigal	gene	4605695	4606954	.	+	.	ID=GCA000010485_04506_gene;locus_tag=GCA000010485_04506;gene=mtnK
contig_1	Pyrodigal	CDS	4605695	4606954	.	+	0	ID=GCA000010485_04506;Name=S-methyl-5-thioribose kinase;locus_tag=GCA000010485_04506;product=S-methyl-5-thioribose kinase;Dbxref=GO:0005524,GO:0009086,GO:0019509,GO:0046522;gene=mtnK;Parent=GCA000010485_04506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00899,RefSeq:WP_000132325.1,SO:0001217,UniParc:UPI00019AF94B,UniRef:UniRef100_A0A066SUF2,UniRef:UniRef50_B7MMH5,UniRef:UniRef90_B7MMH5;ec_number=2.7.1.100
contig_1	Pyrodigal	gene	4606964	4608079	.	+	.	ID=GCA000010485_04507_gene;locus_tag=GCA000010485_04507;gene=mtnA
contig_1	Pyrodigal	CDS	4606964	4608079	.	+	0	ID=GCA000010485_04507;Name=S-methyl-5-thioribose-1-phosphate isomerase;locus_tag=GCA000010485_04507;product=S-methyl-5-thioribose-1-phosphate isomerase;Dbxref=GO:0019509,GO:0046523;gene=mtnA;Parent=GCA000010485_04507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08963,RefSeq:WP_001022015.1,SO:0001217,UniParc:UPI00019AF94C,UniRef:UniRef100_J7QBE0,UniRef:UniRef50_B7MMH6,UniRef:UniRef90_B7MMH6;ec_number=5.3.1.23
contig_1	Pyrodigal	gene	4608110	4608751	.	+	.	ID=GCA000010485_04508_gene;locus_tag=GCA000010485_04508;gene=ald2
contig_1	Pyrodigal	CDS	4608110	4608751	.	+	0	ID=GCA000010485_04508;Name=5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase;locus_tag=GCA000010485_04508;product=5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase;Dbxref=GO:0005829,GO:0016832,GO:0019323,GO:0019509,GO:0046872;gene=ald2;Parent=GCA000010485_04508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000439686.1,SO:0001217,UniParc:UPI00019AF94D,UniRef:UniRef100_J7RCN0,UniRef:UniRef50_B7MMH7,UniRef:UniRef90_B7MMH7;ec_number=4.1.2.62
contig_1	Pyrodigal	gene	4608855	4609859	.	+	.	ID=GCA000010485_04509_gene;locus_tag=GCA000010485_04509
contig_1	Pyrodigal	CDS	4608855	4609859	.	+	0	ID=GCA000010485_04509;Name=Multidrug DMT transporter permease;locus_tag=GCA000010485_04509;product=Multidrug DMT transporter permease;Parent=GCA000010485_04509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000471144.1,SO:0001217,UniParc:UPI00019AF94E,UniRef:UniRef100_A0AAW5ZFG0,UniRef:UniRef50_F8X2N6,UniRef:UniRef90_A0A8S0G689
contig_1	Pyrodigal	gene	4609900	4610886	.	-	.	ID=GCA000010485_04510_gene;locus_tag=GCA000010485_04510;gene=yjhU
contig_1	Pyrodigal	CDS	4609900	4610886	.	-	0	ID=GCA000010485_04510;Name=putative transcriptional regulator YjhU;locus_tag=GCA000010485_04510;product=putative transcriptional regulator YjhU;Dbxref=GO:0003677,GO:0005829,GO:0030246;gene=yjhU;Parent=GCA000010485_04510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000373366.1,SO:0001217,UniParc:UPI0000683EA4,UniRef:UniRef100_P39356,UniRef:UniRef50_P39356,UniRef:UniRef90_P39356
contig_1	Pyrodigal	gene	4611233	4612582	.	-	.	ID=GCA000010485_04511_gene;locus_tag=GCA000010485_04511;gene=yjhF
contig_1	Pyrodigal	CDS	4611233	4612582	.	-	0	ID=GCA000010485_04511;Name=putative permease YjhF;locus_tag=GCA000010485_04511;product=putative permease YjhF;Dbxref=GO:0005886,GO:0015128,GO:0035429;gene=yjhF;Parent=GCA000010485_04511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001128363.1,SO:0001217,UniParc:UPI000013B59C,UniRef:UniRef100_P39357,UniRef:UniRef50_P12012,UniRef:UniRef90_P39357
contig_1	Pyrodigal	gene	4612689	4614656	.	-	.	ID=GCA000010485_04512_gene;locus_tag=GCA000010485_04512;gene=yjhG
contig_1	Pyrodigal	CDS	4612689	4614656	.	-	0	ID=GCA000010485_04512;Name=xylonate dehydratase YjhG;locus_tag=GCA000010485_04512;product=xylonate dehydratase YjhG;Dbxref=GO:0005829,GO:0016836,GO:0046176,GO:0050401;gene=yjhG;Parent=GCA000010485_04512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000116326,RefSeq:WP_000116325.1,SO:0001217,UniParc:UPI00019AF976,UniRef:UniRef100_J7QBE2,UniRef:UniRef50_P39358,UniRef:UniRef90_P39358;ec_number=4.2.1.82
contig_1	Pyrodigal	gene	4614667	4615626	.	-	.	ID=GCA000010485_04513_gene;locus_tag=GCA000010485_04513;gene=yjhH
contig_1	Pyrodigal	CDS	4614667	4615626	.	-	0	ID=GCA000010485_04513;Name=putative 2-dehydro-3-deoxy-D-pentonate aldolase YjhH;locus_tag=GCA000010485_04513;product=putative 2-dehydro-3-deoxy-D-pentonate aldolase YjhH;Dbxref=GO:0005829,GO:0046176,GO:0047440;gene=yjhH;Parent=GCA000010485_04513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22397,SO:0001217,UniParc:UPI00019AF977,UniRef:UniRef100_P39359,UniRef:UniRef50_P75682,UniRef:UniRef90_P39359;ec_number=4.1.2.28
contig_1	Pyrodigal	gene	4615577	4616365	.	-	.	ID=GCA000010485_04514_gene;locus_tag=GCA000010485_04514;gene=yjhI
contig_1	Pyrodigal	CDS	4615577	4616365	.	-	0	ID=GCA000010485_04514;Name=putative HTH-type transcriptional regulator YjhI;locus_tag=GCA000010485_04514;product=putative HTH-type transcriptional regulator YjhI;Dbxref=GO:0003677,GO:0003700,GO:0045892;gene=yjhI;Parent=GCA000010485_04514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000251800.1,SO:0001217,UniParc:UPI00019AF978,UniRef:UniRef100_J7QZF6,UniRef:UniRef50_P39360,UniRef:UniRef90_P39360
contig_1	Pyrodigal	gene	4616668	4617450	.	-	.	ID=GCA000010485_04515_gene;locus_tag=GCA000010485_04515;gene=sgcR
contig_1	Pyrodigal	CDS	4616668	4617450	.	-	0	ID=GCA000010485_04515;Name=Putative sgc region transcriptional regulator;locus_tag=GCA000010485_04515;product=Putative sgc region transcriptional regulator;Dbxref=GO:0003677,GO:0003700;gene=sgcR;Parent=GCA000010485_04515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000082779.1,SO:0001217,UniParc:UPI00019AF979,UniRef:UniRef100_J7QJZ2,UniRef:UniRef50_P39361,UniRef:UniRef90_P39361
contig_1	Pyrodigal	gene	4617467	4618099	.	-	.	ID=GCA000010485_04516_gene;locus_tag=GCA000010485_04516;gene=sgcE
contig_1	Pyrodigal	CDS	4617467	4618099	.	-	0	ID=GCA000010485_04516;Name=ribulose-phosphate 3 epimerase family protein;locus_tag=GCA000010485_04516;product=ribulose-phosphate 3 epimerase family protein;Dbxref=GO:0004750,GO:0005829,GO:0005975,GO:0009052,GO:0046872;gene=sgcE;Parent=GCA000010485_04516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14587,RefSeq:WP_000600624.1,SO:0001217,UniParc:UPI00019AF97A,UniRef:UniRef100_J7R9N4,UniRef:UniRef50_P39362,UniRef:UniRef90_P39362;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	4618111	4618542	.	-	.	ID=GCA000010485_04517_gene;locus_tag=GCA000010485_04517;gene=sgcA
contig_1	Pyrodigal	CDS	4618111	4618542	.	-	0	ID=GCA000010485_04517;Name=Putative phosphotransferase IIA component SgcA;locus_tag=GCA000010485_04517;product=Putative phosphotransferase IIA component SgcA;Dbxref=GO:0005737,GO:0008643,GO:0009401,GO:0015795,GO:0016301,GO:1902495;gene=sgcA;Parent=GCA000010485_04517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000606405.1,SO:0001217,UniParc:UPI00019AF97B,UniRef:UniRef100_J7QBE5,UniRef:UniRef50_P39363,UniRef:UniRef90_P39363
contig_1	Pyrodigal	gene	4618673	4619479	.	-	.	ID=GCA000010485_04518_gene;locus_tag=GCA000010485_04518;gene=sgcQ
contig_1	Pyrodigal	CDS	4618673	4619479	.	-	0	ID=GCA000010485_04518;Name=BtpA family protein SgcQ;locus_tag=GCA000010485_04518;product=BtpA family protein SgcQ;gene=sgcQ;Parent=GCA000010485_04518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000118626,KEGG:K06971,RefSeq:WP_000118626.1,SO:0001217,UniParc:UPI0000135914,UniRef:UniRef100_P39364,UniRef:UniRef50_P39364,UniRef:UniRef90_P39364
contig_1	Pyrodigal	gene	4619492	4620805	.	-	.	ID=GCA000010485_04519_gene;locus_tag=GCA000010485_04519;gene=sgcC
contig_1	Pyrodigal	CDS	4619492	4620805	.	-	0	ID=GCA000010485_04519;Name=Putative permease IIC component;locus_tag=GCA000010485_04519;product=Putative permease IIC component;Dbxref=GO:0005886,GO:0008643,GO:0009401,GO:0015577,GO:0015795,GO:1902495;gene=sgcC;Parent=GCA000010485_04519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02775,RefSeq:WP_000460845.1,SO:0001217,UniParc:UPI00019AF97C,UniRef:UniRef100_J7QZF9,UniRef:UniRef50_P39365,UniRef:UniRef90_P39365
contig_1	Pyrodigal	gene	4620817	4621095	.	-	.	ID=GCA000010485_04520_gene;locus_tag=GCA000010485_04520;gene=sgcB
contig_1	Pyrodigal	CDS	4620817	4621095	.	-	0	ID=GCA000010485_04520;Name=Putative phosphotransferase enzyme IIB component SgcB;locus_tag=GCA000010485_04520;product=Putative phosphotransferase enzyme IIB component SgcB;Dbxref=GO:0005737,GO:0008643,GO:0008982,GO:0009401,GO:0015795,GO:0016301,GO:1902495;gene=sgcB;Parent=GCA000010485_04520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000722973.1,SO:0001217,UniParc:UPI000013590A,UniRef:UniRef100_P58035,UniRef:UniRef50_P58035,UniRef:UniRef90_P58035;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	4621092	4622213	.	-	.	ID=GCA000010485_04521_gene;locus_tag=GCA000010485_04521;gene=sgcX
contig_1	Pyrodigal	CDS	4621092	4622213	.	-	0	ID=GCA000010485_04521;Name=Putative aminopeptidase SgcX;locus_tag=GCA000010485_04521;product=Putative aminopeptidase SgcX;Dbxref=GO:0004177,GO:0006508,GO:0008237,GO:0046872;gene=sgcX;Parent=GCA000010485_04521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20609,RefSeq:WP_000010833.1,SO:0001217,UniParc:UPI00019AF97D,UniRef:UniRef100_A0A061KN92,UniRef:UniRef50_P39366,UniRef:UniRef90_P39366;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	4622612	4622872	.	-	.	ID=GCA000010485_04522_gene;locus_tag=GCA000010485_04522
contig_1	Pyrodigal	CDS	4622612	4622872	.	-	0	ID=GCA000010485_04522;Name=Putative zinc ribbon domain-containing protein;locus_tag=GCA000010485_04522;product=Putative zinc ribbon domain-containing protein;Parent=GCA000010485_04522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000077645.1,SO:0001217,UniParc:UPI00019AF97E,UniRef:UniRef100_A0A066T2U1,UniRef:UniRef50_B5Y2Q6,UniRef:UniRef90_B5Y2Q6
contig_1	Pyrodigal	gene	4623000	4623746	.	-	.	ID=GCA000010485_04523_gene;locus_tag=GCA000010485_04523
contig_1	Pyrodigal	CDS	4623000	4623746	.	-	0	ID=GCA000010485_04523;Name=Methyltransferase domain-containing protein;locus_tag=GCA000010485_04523;product=Methyltransferase domain-containing protein;Parent=GCA000010485_04523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000354249.1,SO:0001217,UniParc:UPI00019AF97F,UniRef:UniRef100_J7RCP4,UniRef:UniRef50_A0A0M3QGL6,UniRef:UniRef90_E5YIE0
contig_1	Pyrodigal	gene	4623798	4624349	.	-	.	ID=GCA000010485_04524_gene;locus_tag=GCA000010485_04524
contig_1	Pyrodigal	CDS	4623798	4624349	.	-	0	ID=GCA000010485_04524;Name=N-acetyltransferase;locus_tag=GCA000010485_04524;product=N-acetyltransferase;Parent=GCA000010485_04524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019AF980,UniRef:UniRef100_J7QZG4,UniRef:UniRef50_I9GIQ6,UniRef:UniRef90_A0A4P6WKB4
contig_1	Pyrodigal	gene	4624361	4624618	.	-	.	ID=GCA000010485_04525_gene;locus_tag=GCA000010485_04525;gene=yjhX
contig_1	Pyrodigal	CDS	4624361	4624618	.	-	0	ID=GCA000010485_04525;Name=UPF0386 protein YjhX;locus_tag=GCA000010485_04525;product=UPF0386 protein YjhX;gene=yjhX;Parent=GCA000010485_04525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3811,COG:S,KEGG:K09982,RefSeq:WP_001054379.1,SO:0001217,UniParc:UPI0001825C79,UniRef:UniRef100_B6I030,UniRef:UniRef50_Q8Z1D0,UniRef:UniRef90_Q7CP77
contig_1	Pyrodigal	gene	4624876	4624986	.	-	.	ID=GCA000010485_04526_gene;locus_tag=GCA000010485_04526
contig_1	Pyrodigal	CDS	4624876	4624986	.	-	0	ID=GCA000010485_04526;Name=hypothetical protein;locus_tag=GCA000010485_04526;product=hypothetical protein;Parent=GCA000010485_04526_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	4624995	4625294	.	-	.	ID=GCA000010485_04527_gene;locus_tag=GCA000010485_04527
contig_1	Pyrodigal	CDS	4624995	4625294	.	-	0	ID=GCA000010485_04527;Name=N-acetyltransferase;locus_tag=GCA000010485_04527;product=N-acetyltransferase;Parent=GCA000010485_04527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001332034.1,SO:0001217,UniParc:UPI00019AF981,UniRef:UniRef100_A0A0J2CFY3,UniRef:UniRef50_A0A0J2CFY3,UniRef:UniRef90_A0A2S5UGD1
contig_1	Pyrodigal	gene	4625462	4626106	.	+	.	ID=GCA000010485_04528_gene;locus_tag=GCA000010485_04528
contig_1	Pyrodigal	CDS	4625462	4626106	.	+	0	ID=GCA000010485_04528;Name=AAA domain-containing protein;locus_tag=GCA000010485_04528;product=AAA domain-containing protein;Parent=GCA000010485_04528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F0B1A8E
contig_1	Pyrodigal	gene	4626133	4627746	.	-	.	ID=GCA000010485_04529_gene;locus_tag=GCA000010485_04529;gene=tnp
contig_1	Pyrodigal	CDS	4626133	4627746	.	-	0	ID=GCA000010485_04529;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_04529;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_1	Pyrodigal	gene	4627777	4628127	.	-	.	ID=GCA000010485_04530_gene;locus_tag=GCA000010485_04530;gene=tnpB
contig_1	Pyrodigal	CDS	4627777	4628127	.	-	0	ID=GCA000010485_04530;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_04530;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_04530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_1	Pyrodigal	gene	4628124	4628549	.	-	.	ID=GCA000010485_04531_gene;locus_tag=GCA000010485_04531;gene=tnpA
contig_1	Pyrodigal	CDS	4628124	4628549	.	-	0	ID=GCA000010485_04531;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_04531;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_04531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_1	Pyrodigal	gene	4628794	4629138	.	+	.	ID=GCA000010485_04532_gene;locus_tag=GCA000010485_04532
contig_1	Pyrodigal	CDS	4628794	4629138	.	+	0	ID=GCA000010485_04532;Name=phospholipase D-like domain-containing protein;locus_tag=GCA000010485_04532;product=phospholipase D-like domain-containing protein;Parent=GCA000010485_04532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1F2LUJ3,UniRef:UniRef90_UPI001F3D0207
contig_1	Pyrodigal	gene	4629721	4630701	.	-	.	ID=GCA000010485_04533_gene;locus_tag=GCA000010485_04533;gene=nanS
contig_1	Pyrodigal	CDS	4629721	4630701	.	-	0	ID=GCA000010485_04533;Name=putative 9-O-acetyl-N-acetylneuraminic acid deacetylase;locus_tag=GCA000010485_04533;product=putative 9-O-acetyl-N-acetylneuraminic acid deacetylase;Dbxref=GO:0001681,GO:0006054,GO:0019752,GO:0042597;gene=nanS;Parent=GCA000010485_04533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000991462.1,SO:0001217,UniParc:UPI00019AF983,UniRef:UniRef100_J7RCP9,UniRef:UniRef50_P39370,UniRef:UniRef90_P39370;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	4630765	4631871	.	-	.	ID=GCA000010485_04534_gene;locus_tag=GCA000010485_04534;gene=nanM
contig_1	Pyrodigal	CDS	4630765	4631871	.	-	0	ID=GCA000010485_04534;Name=N-acetylneuraminate epimerase;locus_tag=GCA000010485_04534;product=N-acetylneuraminate epimerase;Dbxref=GO:0016857,GO:0042597;gene=nanM;Parent=GCA000010485_04534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001309184,RefSeq:WP_001295733.1,SO:0001217,UniParc:UPI0001C22F02,UniRef:UniRef100_A0A066SPX8,UniRef:UniRef50_P39371,UniRef:UniRef90_P39371;ec_number=5.1.3.24
contig_1	Pyrodigal	gene	4631891	4632607	.	-	.	ID=GCA000010485_04535_gene;locus_tag=GCA000010485_04535;gene=nanC
contig_1	Pyrodigal	CDS	4631891	4632607	.	-	0	ID=GCA000010485_04535;Name=N-acetylneuraminic acid outer membrane channel NanC;locus_tag=GCA000010485_04535;product=N-acetylneuraminic acid outer membrane channel NanC;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0015772,GO:0046930;gene=nanC;Parent=GCA000010485_04535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001295734,KEGG:K22110,RefSeq:WP_001295734.1,SO:0001217,UniParc:UPI000013B596,UniRef:UniRef100_P69856,UniRef:UniRef50_P69856,UniRef:UniRef90_P69856
contig_1	Pyrodigal	gene	4633405	4633800	.	-	.	ID=GCA000010485_04536_gene;locus_tag=GCA000010485_04536
contig_1	Pyrodigal	CDS	4633405	4633800	.	-	0	ID=GCA000010485_04536;Name=hypothetical protein;locus_tag=GCA000010485_04536;product=hypothetical protein;Parent=GCA000010485_04536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001362968.1,SO:0001217,UniParc:UPI00019AF8DB,UniRef:UniRef100_A0A0J2BNX3,UniRef:UniRef50_A0A0H3ESX0,UniRef:UniRef90_A0A0J2BNX3
contig_1	Pyrodigal	gene	4634061	4634663	.	+	.	ID=GCA000010485_04537_gene;locus_tag=GCA000010485_04537;gene=fimB
contig_1	Pyrodigal	CDS	4634061	4634663	.	+	0	ID=GCA000010485_04537;Name=type 1 fimbria switch DNA invertase FimB;locus_tag=GCA000010485_04537;product=type 1 fimbria switch DNA invertase FimB;Dbxref=GO:0006310,GO:0006974,GO:0015074,GO:0043565;gene=fimB;Parent=GCA000010485_04537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000790583,BlastRules:WP_015875142,KEGG:K07357,RefSeq:WP_000790583.1,SO:0001217,UniParc:UPI0000047CAA,UniRef:UniRef100_P0ADH5,UniRef:UniRef50_P0ADH5,UniRef:UniRef90_P0ADH5
contig_1	Pyrodigal	gene	4635141	4635737	.	+	.	ID=GCA000010485_04538_gene;locus_tag=GCA000010485_04538;gene=fimE
contig_1	Pyrodigal	CDS	4635141	4635737	.	+	0	ID=GCA000010485_04538;Name=type 1 fimbria switch DNA invertase FimE;locus_tag=GCA000010485_04538;product=type 1 fimbria switch DNA invertase FimE;Dbxref=GO:0003677,GO:0006310,GO:0015074;gene=fimE;Parent=GCA000010485_04538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000044711,BlastRules:WP_002916189,RefSeq:WP_000044711.1,SO:0001217,UniParc:UPI0000047CAB,UniRef:UniRef100_P0ADH7,UniRef:UniRef50_P0ADH5,UniRef:UniRef90_P0ADH7
contig_1	Pyrodigal	gene	4636217	4636765	.	+	.	ID=GCA000010485_04539_gene;locus_tag=GCA000010485_04539;gene=fimA
contig_1	Pyrodigal	CDS	4636217	4636765	.	+	0	ID=GCA000010485_04539;Name=Type-1 fimbrial protein%2C A chain precursor;locus_tag=GCA000010485_04539;product=Type-1 fimbrial protein%2C A chain precursor;Dbxref=GO:0007155,GO:0009289;gene=fimA;Parent=GCA000010485_04539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000695543.1,SO:0001217,UniParc:UPI00000B0A1D,UniRef:UniRef100_Q9EUA5,UniRef:UniRef50_P04128,UniRef:UniRef90_Q9EUA5,VFDB:VFC0001,VFDB:VFG000873
contig_1	Pyrodigal	gene	4636872	4637369	.	+	.	ID=GCA000010485_04540_gene;locus_tag=GCA000010485_04540;gene=fimI
contig_1	Pyrodigal	CDS	4636872	4637369	.	+	0	ID=GCA000010485_04540;Name=Fimbrin-like protein fimI precursor;locus_tag=GCA000010485_04540;product=Fimbrin-like protein fimI precursor;Dbxref=GO:0009289,GO:0009297,GO:0043709;gene=fimI;Parent=GCA000010485_04540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07351,RefSeq:WP_000457578.1,SO:0001217,UniParc:UPI00005F0B7A,UniRef:UniRef100_P39264,UniRef:UniRef50_P39264,UniRef:UniRef90_P39264,VFDB:VFC0001,VFDB:VFG000874
contig_1	Pyrodigal	gene	4637406	4638131	.	+	.	ID=GCA000010485_04541_gene;locus_tag=GCA000010485_04541;gene=fimC
contig_1	Pyrodigal	CDS	4637406	4638131	.	+	0	ID=GCA000010485_04541;Name=type 1 fimbria chaperone FimC;locus_tag=GCA000010485_04541;product=type 1 fimbria chaperone FimC;Dbxref=GO:0030288,GO:0044183,GO:0061077,GO:0071555;gene=fimC;Parent=GCA000010485_04541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066547,RefSeq:WP_000066560.1,SO:0001217,UniParc:UPI000044088F,UniRef:UniRef100_A0A2X1MNM6,UniRef:UniRef50_P31697,UniRef:UniRef90_P31697
contig_1	Pyrodigal	gene	4638198	4640834	.	+	.	ID=GCA000010485_04542_gene;locus_tag=GCA000010485_04542;gene=fimD
contig_1	Pyrodigal	CDS	4638198	4640834	.	+	0	ID=GCA000010485_04542;Name=fimbrial usher FimD;locus_tag=GCA000010485_04542;product=fimbrial usher FimD;Dbxref=GO:0005515,GO:0009279,GO:0009297,GO:0015473,GO:0016020;gene=fimD;Parent=GCA000010485_04542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000120946,RefSeq:WP_000120922.1,SO:0001217,UniParc:UPI0001C22F03,UniRef:UniRef100_A0A7I0KUH1,UniRef:UniRef50_P30130,UniRef:UniRef90_P30130
contig_1	Pyrodigal	gene	4640844	4641374	.	+	.	ID=GCA000010485_04543_gene;locus_tag=GCA000010485_04543;gene=fimF
contig_1	Pyrodigal	CDS	4640844	4641374	.	+	0	ID=GCA000010485_04543;Name=FimF protein precursor;locus_tag=GCA000010485_04543;product=FimF protein precursor;Dbxref=GO:0007155,GO:0007638,GO:0009289,GO:0009297,GO:0009419,GO:0031589,GO:0043709;gene=fimF;Parent=GCA000010485_04543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07348,RefSeq:WP_001244823.1,SO:0001217,UniParc:UPI000178A583,UniRef:UniRef100_A0A023KEV4,UniRef:UniRef50_P08189,UniRef:UniRef90_P08189,VFDB:VFC0001,VFDB:VFG000877
contig_1	Pyrodigal	gene	4641387	4641890	.	+	.	ID=GCA000010485_04544_gene;locus_tag=GCA000010485_04544;gene=fimG
contig_1	Pyrodigal	CDS	4641387	4641890	.	+	0	ID=GCA000010485_04544;Name=FimG protein precursor;locus_tag=GCA000010485_04544;product=FimG protein precursor;Dbxref=GO:0007155,GO:0007638,GO:0009289,GO:0009419,GO:0031589,GO:0043709;gene=fimG;Parent=GCA000010485_04544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07349,RefSeq:WP_000872005.1,SO:0001217,UniParc:UPI00000D0D31,UniRef:UniRef100_C3SEQ7,UniRef:UniRef50_P08190,UniRef:UniRef90_P08190,VFDB:VFC0001,VFDB:VFG000878
contig_1	Pyrodigal	gene	4641910	4642812	.	+	.	ID=GCA000010485_04545_gene;locus_tag=GCA000010485_04545;gene=fimH
contig_1	Pyrodigal	CDS	4641910	4642812	.	+	0	ID=GCA000010485_04545;Name=type 1 fimbria D-mannose specific adhesin FimH;locus_tag=GCA000010485_04545;product=type 1 fimbria D-mannose specific adhesin FimH;Dbxref=GO:0005537,GO:0007155,GO:0007638,GO:0009289,GO:0009419,GO:0031589,GO:0033644,GO:0043709;gene=fimH;Parent=GCA000010485_04545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000832247,RefSeq:WP_000832226.1,SO:0001217,UniParc:UPI0001C22140,UniRef:UniRef100_A0A7I0KUE9,UniRef:UniRef50_P08191,UniRef:UniRef90_P08191
contig_1	Pyrodigal	gene	4642993	4644336	.	-	.	ID=GCA000010485_04546_gene;locus_tag=GCA000010485_04546;gene=gntP
contig_1	Pyrodigal	CDS	4642993	4644336	.	-	0	ID=GCA000010485_04546;Name=gluconate permease GntP;locus_tag=GCA000010485_04546;product=gluconate permease GntP;Dbxref=GO:0005351,GO:0005886,GO:0015128,GO:0016020,GO:0035429,GO:0046177;gene=gntP;Parent=GCA000010485_04546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16321,RefSeq:WP_000558251.1,SO:0001217,UniParc:UPI000012B8D4,UniRef:UniRef100_P0AC94,UniRef:UniRef50_P0AC94,UniRef:UniRef90_P0AC94
contig_1	Pyrodigal	gene	4644676	4645860	.	+	.	ID=GCA000010485_04547_gene;locus_tag=GCA000010485_04547;gene=uxuA
contig_1	Pyrodigal	CDS	4644676	4645860	.	+	0	ID=GCA000010485_04547;Name=mannonate dehydratase;locus_tag=GCA000010485_04547;product=mannonate dehydratase;Dbxref=GO:0006064,GO:0008198,GO:0008927,GO:0030145,GO:0042840;gene=uxuA;Parent=GCA000010485_04547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01686,RefSeq:WP_000438588.1,SO:0001217,UniParc:UPI0001C22F04,UniRef:UniRef100_A0A7I0L3N9,UniRef:UniRef50_P24215,UniRef:UniRef90_P24215;ec_number=4.2.1.8
contig_1	Pyrodigal	gene	4645941	4647401	.	+	.	ID=GCA000010485_04548_gene;locus_tag=GCA000010485_04548;gene=uxuB
contig_1	Pyrodigal	CDS	4645941	4647401	.	+	0	ID=GCA000010485_04548;Name=D-mannonate oxidoreductase;locus_tag=GCA000010485_04548;product=D-mannonate oxidoreductase;Dbxref=GO:0008866,GO:0019594,GO:0042840;gene=uxuB;Parent=GCA000010485_04548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000208180.1,SO:0001217,UniParc:UPI000044021D,UniRef:UniRef100_Q65A07,UniRef:UniRef50_P39160,UniRef:UniRef90_P39160;ec_number=1.1.1.57
contig_1	Pyrodigal	gene	4647616	4648389	.	+	.	ID=GCA000010485_04549_gene;locus_tag=GCA000010485_04549;gene=uxuR
contig_1	Pyrodigal	CDS	4647616	4648389	.	+	0	ID=GCA000010485_04549;Name=Uxu operon transcriptional regulator;locus_tag=GCA000010485_04549;product=Uxu operon transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0006351;gene=uxuR;Parent=GCA000010485_04549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13637,RefSeq:WP_000833694.1,SO:0001217,UniParc:UPI00019AF8E1,UniRef:UniRef100_A0A1M1N894,UniRef:UniRef50_P39161,UniRef:UniRef90_P39161
contig_1	Pyrodigal	gene	4648564	4648941	.	-	.	ID=GCA000010485_04550_gene;locus_tag=GCA000010485_04550;gene=tnp
contig_1	Pyrodigal	CDS	4648564	4648941	.	-	0	ID=GCA000010485_04550;Name=IS1 family transposase;locus_tag=GCA000010485_04550;product=IS1 family transposase;Dbxref=GO:0004803,GO:0006313;gene=tnp;Parent=GCA000010485_04550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3677,COG:X,SO:0001217,UniParc:UPI000209C36A,UniRef:UniRef100_A0A2X8WFP8,UniRef:UniRef50_P0C652,UniRef:UniRef90_P0C652
contig_1	Pyrodigal	gene	4648986	4649261	.	-	.	ID=GCA000010485_04551_gene;locus_tag=GCA000010485_04551;gene=tnp
contig_1	Pyrodigal	CDS	4648986	4649261	.	-	0	ID=GCA000010485_04551;Name=IS1 family IS1A transposase ORF A;locus_tag=GCA000010485_04551;product=IS1 family IS1A transposase ORF A;Dbxref=GO:0004803,GO:0006313;gene=tnp;Parent=GCA000010485_04551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3677,COG:X,IS:IS1A,RefSeq:WP_000179213.1,SO:0001217,UniParc:UPI00000009E0,UniRef:UniRef100_P0C652,UniRef:UniRef50_P0C652,UniRef:UniRef90_P0C652
contig_1	Pyrodigal	gene	4649295	4650137	.	-	.	ID=GCA000010485_04552_gene;locus_tag=GCA000010485_04552
contig_1	Pyrodigal	CDS	4649295	4650137	.	-	0	ID=GCA000010485_04552;Name=DUF2686 domain-containing protein;locus_tag=GCA000010485_04552;product=DUF2686 domain-containing protein;Parent=GCA000010485_04552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062572.1,SO:0001217,UniParc:UPI0001C22F06,UniRef:UniRef100_A0A2W0H0J4,UniRef:UniRef50_B2TYV7,UniRef:UniRef90_A0A1X3J785
contig_1	Bakta	gene	4650729	4650812	.	+	.	ID=GCA000010485_04553_gene;locus_tag=GCA000010485_04553;inference=ab initio prediction:Bakta;gene=iraD
contig_1	Bakta	CDS	4650729	4650812	.	+	0	ID=GCA000010485_04553;Name=iraD leader peptide;locus_tag=GCA000010485_04553;product=iraD leader peptide;Dbxref=GO:0006417;gene=iraD;Parent=GCA000010485_04553_gene;Note=RefSeq:WP_120795393.1,SO:0001217,UniParc:UPI00045A45BD,UniRef:UniRef100_P0DPC6,UniRef:UniRef50_P0DPC6,UniRef:UniRef90_P0DPC6
contig_1	Pyrodigal	gene	4650809	4651201	.	+	.	ID=GCA000010485_04554_gene;locus_tag=GCA000010485_04554;gene=iraD
contig_1	Pyrodigal	CDS	4650809	4651201	.	+	0	ID=GCA000010485_04554;Name=anti-adapter protein IraD;locus_tag=GCA000010485_04554;product=anti-adapter protein IraD;Dbxref=GO:0005737,GO:0006974,GO:0034599,GO:0043856;gene=iraD;Parent=GCA000010485_04554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21637,RefSeq:WP_000986215.1,SO:0001217,UniParc:UPI000175031E,UniRef:UniRef100_A7ZVM4,UniRef:UniRef50_P39375,UniRef:UniRef90_P39375
contig_1	Pyrodigal	gene	4651194	4652105	.	-	.	ID=GCA000010485_04555_gene;locus_tag=GCA000010485_04555;gene=hypT
contig_1	Pyrodigal	CDS	4651194	4652105	.	-	0	ID=GCA000010485_04555;Name=hypochlorite stress DNA-binding transcriptional regulator HypT;locus_tag=GCA000010485_04555;product=hypochlorite stress DNA-binding transcriptional regulator HypT;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0042802;gene=hypT;Parent=GCA000010485_04555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000340758.1,SO:0001217,UniParc:UPI000044022D,UniRef:UniRef100_A0A376CS19,UniRef:UniRef50_P39376,UniRef:UniRef90_P39376
contig_1	Pyrodigal	gene	4652170	4653342	.	-	.	ID=GCA000010485_04556_gene;locus_tag=GCA000010485_04556;gene=iadA
contig_1	Pyrodigal	CDS	4652170	4653342	.	-	0	ID=GCA000010485_04556;Name=beta-aspartyl-peptidase;locus_tag=GCA000010485_04556;product=beta-aspartyl-peptidase;Dbxref=GO:0005737,GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0008798,GO:0016810,GO:0042802;gene=iadA;Parent=GCA000010485_04556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01305,RefSeq:WP_000568416.1,SO:0001217,UniParc:UPI00005EEDAC,UniRef:UniRef100_W8SUU9,UniRef:UniRef50_P39377,UniRef:UniRef90_P39377;ec_number=3.4.19.5
contig_1	Pyrodigal	gene	4653355	4653816	.	-	.	ID=GCA000010485_04557_gene;locus_tag=GCA000010485_04557;gene=yjiG
contig_1	Pyrodigal	CDS	4653355	4653816	.	-	0	ID=GCA000010485_04557;Name=Inner membrane protein YjiG;locus_tag=GCA000010485_04557;product=Inner membrane protein YjiG;Dbxref=GO:0005886;gene=yjiG;Parent=GCA000010485_04557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000211971.1,SO:0001217,UniParc:UPI000013B5B0,UniRef:UniRef100_P0AEH8,UniRef:UniRef50_P0AEH8,UniRef:UniRef90_P0AEH8
contig_1	Pyrodigal	gene	4653813	4654496	.	-	.	ID=GCA000010485_04558_gene;locus_tag=GCA000010485_04558;gene=yjiH
contig_1	Pyrodigal	CDS	4653813	4654496	.	-	0	ID=GCA000010485_04558;Name=putative protein YjiH;locus_tag=GCA000010485_04558;product=putative protein YjiH;Dbxref=GO:0005886;gene=yjiH;Parent=GCA000010485_04558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001295597.1,SO:0001217,UniParc:UPI000013B5B1,UniRef:UniRef100_P39379,UniRef:UniRef50_P39379,UniRef:UniRef90_P39379
contig_1	Pyrodigal	gene	4654746	4655300	.	+	.	ID=GCA000010485_04559_gene;locus_tag=GCA000010485_04559;gene=kptA
contig_1	Pyrodigal	CDS	4654746	4655300	.	+	0	ID=GCA000010485_04559;Name=RNA 2'-phosphotransferase;locus_tag=GCA000010485_04559;product=RNA 2'-phosphotransferase;Dbxref=GO:0000215,GO:0003950,GO:0006388;gene=kptA;Parent=GCA000010485_04559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07559,RefSeq:WP_001151855.1,SO:0001217,UniParc:UPI000012DFE8,UniRef:UniRef100_P39380,UniRef:UniRef50_P39380,UniRef:UniRef90_P39380;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	4655313	4656491	.	-	.	ID=GCA000010485_04560_gene;locus_tag=GCA000010485_04560;gene=yjiJ
contig_1	Pyrodigal	CDS	4655313	4656491	.	-	0	ID=GCA000010485_04560;Name=putative protein YjiJ;locus_tag=GCA000010485_04560;product=putative protein YjiJ;Dbxref=GO:0005886;gene=yjiJ;Parent=GCA000010485_04560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001139963.1,SO:0001217,UniParc:UPI00005EF337,UniRef:UniRef100_A0A0K4R0X2,UniRef:UniRef50_P39381,UniRef:UniRef90_P39381
contig_1	Pyrodigal	gene	4656559	4657530	.	-	.	ID=GCA000010485_04561_gene;locus_tag=GCA000010485_04561;gene=yjiK
contig_1	Pyrodigal	CDS	4656559	4657530	.	-	0	ID=GCA000010485_04561;Name=putative protein YjiK;locus_tag=GCA000010485_04561;product=putative protein YjiK;gene=yjiK;Parent=GCA000010485_04561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001324742.1,SO:0001217,UniParc:UPI00015C4EF1,UniRef:UniRef100_A0A0J2B492,UniRef:UniRef50_P39382,UniRef:UniRef90_A0A0J2B492
contig_1	Pyrodigal	gene	4657484	4657741	.	-	.	ID=GCA000010485_04562_gene;locus_tag=GCA000010485_04562
contig_1	Pyrodigal	CDS	4657484	4657741	.	-	0	ID=GCA000010485_04562;Name=DUF3343 domain-containing protein;locus_tag=GCA000010485_04562;product=DUF3343 domain-containing protein;Parent=GCA000010485_04562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000666413.1,SO:0001217,UniParc:UPI00000DF475,UniRef:UniRef100_A0A0V9S7Z7,UniRef:UniRef50_P0DN74,UniRef:UniRef90_A0A0V9S7Z7
contig_1	Pyrodigal	gene	4657738	4658505	.	-	.	ID=GCA000010485_04563_gene;locus_tag=GCA000010485_04563;gene=yjiL
contig_1	Pyrodigal	CDS	4657738	4658505	.	-	0	ID=GCA000010485_04563;Name=putative protein YjiL;locus_tag=GCA000010485_04563;product=putative protein YjiL;Dbxref=GO:0046872,GO:0051539;gene=yjiL;Parent=GCA000010485_04563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1924,COG:I,RefSeq:WP_001297641.1,SO:0001217,UniParc:UPI00015C4EF2,UniRef:UniRef100_A0A0J8XE22,UniRef:UniRef50_P39383,UniRef:UniRef90_P39383
contig_1	Pyrodigal	gene	4658515	4659666	.	-	.	ID=GCA000010485_04564_gene;locus_tag=GCA000010485_04564;gene=yjiM
contig_1	Pyrodigal	CDS	4658515	4659666	.	-	0	ID=GCA000010485_04564;Name=double-cubane-cluster-containing anaerobic reductase;locus_tag=GCA000010485_04564;product=double-cubane-cluster-containing anaerobic reductase;Dbxref=GO:0006974,GO:0016829;gene=yjiM;Parent=GCA000010485_04564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001329087.1,SO:0001217,UniParc:UPI0001C22F07,UniRef:UniRef100_A0A1J8GGQ6,UniRef:UniRef50_P39384,UniRef:UniRef90_P39384;ec_number=4.-.-.-
contig_1	Pyrodigal	gene	4659782	4661062	.	-	.	ID=GCA000010485_04565_gene;locus_tag=GCA000010485_04565;gene=yjiN
contig_1	Pyrodigal	CDS	4659782	4661062	.	-	0	ID=GCA000010485_04565;Name=putative protein YjiN;locus_tag=GCA000010485_04565;product=putative protein YjiN;Dbxref=GO:0005886;gene=yjiN;Parent=GCA000010485_04565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037382.1,SO:0001217,UniParc:UPI00005EF160,UniRef:UniRef100_A0A2W0GX89,UniRef:UniRef50_P39385,UniRef:UniRef90_P39385
contig_1	Pyrodigal	gene	4661103	4662362	.	-	.	ID=GCA000010485_04566_gene;locus_tag=GCA000010485_04566;gene=mdtM
contig_1	Pyrodigal	CDS	4661103	4662362	.	-	0	ID=GCA000010485_04566;Name=multidrug efflux MFS transporter MdtM;locus_tag=GCA000010485_04566;product=multidrug efflux MFS transporter MdtM;Dbxref=GO:0005886,GO:0015125,GO:0015385,GO:0015386,GO:0015721,GO:0016020,GO:0022857,GO:0030641,GO:0036376,GO:0046677,GO:0055085,GO:0097623,GO:1990961;gene=mdtM;Parent=GCA000010485_04566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K23241,NCBIProtein:AAC77293.1,SO:0001217,UniParc:UPI00005EF161,UniRef:UniRef100_A0A0K5ZQJ1,UniRef:UniRef50_P39386,UniRef:UniRef90_P39386
contig_1	Pyrodigal	gene	4662827	4663120	.	+	.	ID=GCA000010485_04567_gene;locus_tag=GCA000010485_04567
contig_1	Pyrodigal	CDS	4662827	4663120	.	+	0	ID=GCA000010485_04567;Name=IS1 family transposase;locus_tag=GCA000010485_04567;product=IS1 family transposase;Dbxref=GO:0004803;Parent=GCA000010485_04567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000089811.1,SO:0001217,UniParc:UPI00000BAEA9,UniRef:UniRef100_Q9X2T0,UniRef:UniRef50_P57998,UniRef:UniRef90_Q9X2T0
contig_1	Pyrodigal	gene	4663121	4663330	.	+	.	ID=GCA000010485_04568_gene;locus_tag=GCA000010485_04568;gene=tnp
contig_1	Pyrodigal	CDS	4663121	4663330	.	+	0	ID=GCA000010485_04568;Name=IS1 family IS1X2 transposase;locus_tag=GCA000010485_04568;product=IS1 family IS1X2 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3677,COG:X,RefSeq:WP_000129477.1,SO:0001217,UniParc:UPI0001C22F08,UniRef:UniRef100_A0AAP5PNU9,UniRef:UniRef50_B2XU16,UniRef:UniRef90_A0AAE4NFK1
contig_1	Pyrodigal	gene	4663529	4663816	.	+	.	ID=GCA000010485_04569_gene;locus_tag=GCA000010485_04569
contig_1	Pyrodigal	CDS	4663529	4663816	.	+	0	ID=GCA000010485_04569;Name=Ribonuclease toxin%2C BrnT%2C of type II toxin-antitoxin system;locus_tag=GCA000010485_04569;product=Ribonuclease toxin%2C BrnT%2C of type II toxin-antitoxin system;Parent=GCA000010485_04569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001297643.1,SO:0001217,UniParc:UPI000176C164,UniRef:UniRef100_A0A2P9EBD6,UniRef:UniRef50_A0A7U9H5P0,UniRef:UniRef90_A0A2P9EBD6
contig_1	Pyrodigal	gene	4663803	4664105	.	+	.	ID=GCA000010485_04570_gene;locus_tag=GCA000010485_04570
contig_1	Pyrodigal	CDS	4663803	4664105	.	+	0	ID=GCA000010485_04570;Name=putative protein conserved in bacteria;locus_tag=GCA000010485_04570;product=putative protein conserved in bacteria;Parent=GCA000010485_04570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000063156.1,SO:0001217,UniParc:UPI000176C140,UniRef:UniRef100_A0A2X3KJQ7,UniRef:UniRef50_A0A2X3KJQ7,UniRef:UniRef90_A0A2X3KJQ7
contig_1	Pyrodigal	gene	4664139	4665095	.	-	.	ID=GCA000010485_04571_gene;locus_tag=GCA000010485_04571;gene=yjiA
contig_1	Pyrodigal	CDS	4664139	4665095	.	-	0	ID=GCA000010485_04571;Name=GTPase;locus_tag=GCA000010485_04571;product=GTPase;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006974,GO:0042802,GO:0046914,GO:1990606;gene=yjiA;Parent=GCA000010485_04571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_001297640.1,SO:0001217,UniParc:UPI0000226499,UniRef:UniRef100_W8T7T1,UniRef:UniRef50_P24203,UniRef:UniRef90_P24203;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	4665106	4665309	.	-	.	ID=GCA000010485_04572_gene;locus_tag=GCA000010485_04572;gene=yjiX
contig_1	Pyrodigal	CDS	4665106	4665309	.	-	0	ID=GCA000010485_04572;Name=putative protein YjiX;locus_tag=GCA000010485_04572;product=putative protein YjiX;Dbxref=GO:0006974;gene=yjiX;Parent=GCA000010485_04572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2879,COG:S,RefSeq:WP_000467859.1,SO:0001217,UniParc:UPI000013B5BF,UniRef:UniRef100_P0ADC8,UniRef:UniRef50_P0ADC8,UniRef:UniRef90_P0ADC8
contig_1	Pyrodigal	gene	4665359	4667509	.	-	.	ID=GCA000010485_04573_gene;locus_tag=GCA000010485_04573;gene=btsT
contig_1	Pyrodigal	CDS	4665359	4667509	.	-	0	ID=GCA000010485_04573;Name=pyruvate/proton symporter BtsT;locus_tag=GCA000010485_04573;product=pyruvate/proton symporter BtsT;Dbxref=GO:0005477,GO:0005886,GO:0006849,GO:0006974,GO:0009267,GO:0015293,GO:0031669;gene=btsT;Parent=GCA000010485_04573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001299714,COG:CE,COG:COG1966,KEGG:K06200,RefSeq:WP_001295524.1,SO:0001217,UniParc:UPI000176C13B,UniRef:UniRef100_A0A1E5M4H1,UniRef:UniRef50_P39396,UniRef:UniRef90_P39396
contig_1	Pyrodigal	gene	4667886	4669550	.	+	.	ID=GCA000010485_04574_gene;locus_tag=GCA000010485_04574;gene=tsr
contig_1	Pyrodigal	CDS	4667886	4669550	.	+	0	ID=GCA000010485_04574;Name=methyl-accepting chemotaxis protein;locus_tag=GCA000010485_04574;product=methyl-accepting chemotaxis protein;Dbxref=GO:0004888,GO:0005886,GO:0006935,GO:0007165,GO:0007172,GO:0009593,GO:0016020,GO:0032110,GO:0042802,GO:0043113,GO:0048870,GO:0050920,GO:0051260,GO:0070206,GO:0071230,GO:0098561,GO:1902021;gene=tsr;Parent=GCA000010485_04574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000919540.1,SO:0001217,UniParc:UPI00005EF167,UniRef:UniRef100_W8T3G4,UniRef:UniRef50_P02942,UniRef:UniRef90_P02942
contig_1	Pyrodigal	gene	4669599	4670960	.	-	.	ID=GCA000010485_04575_gene;locus_tag=GCA000010485_04575;gene=lgoT
contig_1	Pyrodigal	CDS	4669599	4670960	.	-	0	ID=GCA000010485_04575;Name=putative L-galactonate transporter;locus_tag=GCA000010485_04575;product=putative L-galactonate transporter;Dbxref=GO:0005886,GO:0022857,GO:0042873;gene=lgoT;Parent=GCA000010485_04575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K23016,RefSeq:WP_000410144.1,SO:0001217,UniParc:UPI00005EF168,UniRef:UniRef100_W8T7S0,UniRef:UniRef50_P39398,UniRef:UniRef90_P39398
contig_1	Pyrodigal	gene	4671175	4672089	.	-	.	ID=GCA000010485_04576_gene;locus_tag=GCA000010485_04576;gene=lgoR
contig_1	Pyrodigal	CDS	4671175	4672089	.	-	0	ID=GCA000010485_04576;Name=putative HTH-type transcriptional regulator LgoR;locus_tag=GCA000010485_04576;product=putative HTH-type transcriptional regulator LgoR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0019584;gene=lgoR;Parent=GCA000010485_04576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23015,RefSeq:WP_000091572.1,SO:0001217,UniParc:UPI00005EF169,UniRef:UniRef100_W8TTL3,UniRef:UniRef50_P39399,UniRef:UniRef90_P39399
contig_1	Pyrodigal	gene	4672228	4673250	.	+	.	ID=GCA000010485_04577_gene;locus_tag=GCA000010485_04577;gene=lgoD
contig_1	Pyrodigal	CDS	4672228	4673250	.	+	0	ID=GCA000010485_04577;Name=L-galactonate oxidoreductase;locus_tag=GCA000010485_04577;product=L-galactonate oxidoreductase;Dbxref=GO:0008270,GO:0016616,GO:0034195;gene=lgoD;Parent=GCA000010485_04577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000106030,RefSeq:WP_000106023.1,SO:0001217,UniParc:UPI0001C22F09,UniRef:UniRef100_A0A7I0KUC1,UniRef:UniRef50_P39400,UniRef:UniRef90_P39400;ec_number=1.1.1.414
contig_1	Pyrodigal	gene	4673390	4675681	.	-	.	ID=GCA000010485_04578_gene;locus_tag=GCA000010485_04578;gene=opgB
contig_1	Pyrodigal	CDS	4673390	4675681	.	-	0	ID=GCA000010485_04578;Name=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;locus_tag=GCA000010485_04578;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;Dbxref=GO:0005886,GO:0008484,GO:0008960,GO:0009250;gene=opgB;Parent=GCA000010485_04578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1368,COG:M,KEGG:K01002,RefSeq:WP_001292660.1,SO:0001217,UniParc:UPI0001C22F0A,UniRef:UniRef100_A0A7I0KW38,UniRef:UniRef50_P39401,UniRef:UniRef90_P39401;ec_number=2.7.8.20
contig_1	Pyrodigal	gene	4675935	4676429	.	-	.	ID=GCA000010485_04579_gene;locus_tag=GCA000010485_04579;gene=yjjA
contig_1	Pyrodigal	CDS	4675935	4676429	.	-	0	ID=GCA000010485_04579;Name=putative protein YjjA;locus_tag=GCA000010485_04579;product=putative protein YjjA;Dbxref=GO:0005829;gene=yjjA;Parent=GCA000010485_04579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001308243.1,SO:0001217,UniParc:UPI000013B5C7,UniRef:UniRef100_P18390,UniRef:UniRef50_P18390,UniRef:UniRef90_P18390
contig_1	Pyrodigal	gene	4676478	4677215	.	-	.	ID=GCA000010485_04580_gene;locus_tag=GCA000010485_04580;gene=dnaC
contig_1	Pyrodigal	CDS	4676478	4677215	.	-	0	ID=GCA000010485_04580;Name=DNA replication protein DnaC;locus_tag=GCA000010485_04580;product=DNA replication protein DnaC;Dbxref=GO:0003677,GO:0005524,GO:0006269,GO:0016887,GO:1990077;gene=dnaC;Parent=GCA000010485_04580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1484,COG:L,RefSeq:WP_000799911.1,SO:0001217,UniParc:UPI0000129564,UniRef:UniRef100_P0AEF0,UniRef:UniRef50_P0AEF0,UniRef:UniRef90_P0AEF0;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	4677218	4677757	.	-	.	ID=GCA000010485_04581_gene;locus_tag=GCA000010485_04581;gene=dnaT
contig_1	Pyrodigal	CDS	4677218	4677757	.	-	0	ID=GCA000010485_04581;Name=primosomal protein DnaT;locus_tag=GCA000010485_04581;product=primosomal protein DnaT;Dbxref=GO:0006269,GO:1990077;gene=dnaT;Parent=GCA000010485_04581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5529,COG:X,RefSeq:WP_000098818.1,SO:0001217,UniParc:UPI000016824F,UniRef:UniRef100_P0A8J2,UniRef:UniRef50_P0A8J2,UniRef:UniRef90_P0A8J2
contig_1	Pyrodigal	gene	4677864	4678337	.	-	.	ID=GCA000010485_04582_gene;locus_tag=GCA000010485_04582;gene=yjjB
contig_1	Pyrodigal	CDS	4677864	4678337	.	-	0	ID=GCA000010485_04582;Name=threonine/serine exporter;locus_tag=GCA000010485_04582;product=threonine/serine exporter;Dbxref=GO:0005886,GO:0015744;gene=yjjB;Parent=GCA000010485_04582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000538176.1,SO:0001217,UniParc:UPI00005F064A,UniRef:UniRef100_Q3YU30,UniRef:UniRef50_P0ADD2,UniRef:UniRef90_P0ADD2
contig_1	Pyrodigal	gene	4678328	4679098	.	-	.	ID=GCA000010485_04583_gene;locus_tag=GCA000010485_04583;gene=yjjP
contig_1	Pyrodigal	CDS	4678328	4679098	.	-	0	ID=GCA000010485_04583;Name=putative succinate transporter subunit YjjP;locus_tag=GCA000010485_04583;product=putative succinate transporter subunit YjjP;Dbxref=GO:0005886,GO:0015744,GO:0022857;gene=yjjP;Parent=GCA000010485_04583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001341281.1,SO:0001217,UniParc:UPI0001887FE7,UniRef:UniRef100_A0A0J1XVW6,UniRef:UniRef50_P0ADD5,UniRef:UniRef90_P0ADD5
contig_1	Pyrodigal	gene	4679719	4680444	.	+	.	ID=GCA000010485_04584_gene;locus_tag=GCA000010485_04584;gene=yjjQ
contig_1	Pyrodigal	CDS	4679719	4680444	.	+	0	ID=GCA000010485_04584;Name=Putative transcription factor YjjQ;locus_tag=GCA000010485_04584;product=Putative transcription factor YjjQ;Dbxref=GO:0003677,GO:0006355,GO:0051595;gene=yjjQ;Parent=GCA000010485_04584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000936635.1,SO:0001217,UniParc:UPI000013B5D4,UniRef:UniRef100_P0ADD8,UniRef:UniRef50_P0ADD8,UniRef:UniRef90_P0ADD8
contig_1	Pyrodigal	gene	4680402	4681079	.	+	.	ID=GCA000010485_04585_gene;locus_tag=GCA000010485_04585;gene=bglJ
contig_1	Pyrodigal	CDS	4680402	4681079	.	+	0	ID=GCA000010485_04585;Name=DNA-binding transcriptional activator BglJ;locus_tag=GCA000010485_04585;product=DNA-binding transcriptional activator BglJ;Dbxref=GO:0003677,GO:0003700,GO:0005667,GO:0006355,GO:0009314,GO:0043470,GO:0045893;gene=bglJ;Parent=GCA000010485_04585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001469766.1,SO:0001217,UniParc:UPI0001C22F0B,UniRef:UniRef100_A0A0K4P5P8,UniRef:UniRef50_P39404,UniRef:UniRef90_P39404
contig_1	Pyrodigal	gene	4681117	4681905	.	-	.	ID=GCA000010485_04586_gene;locus_tag=GCA000010485_04586;gene=fhuF
contig_1	Pyrodigal	CDS	4681117	4681905	.	-	0	ID=GCA000010485_04586;Name=siderophore-iron reductase FhuF;locus_tag=GCA000010485_04586;product=siderophore-iron reductase FhuF;Dbxref=GO:0000293,GO:0005829,GO:0005886,GO:0016722,GO:0033214,GO:0033215,GO:0046872,GO:0051537;gene=fhuF;Parent=GCA000010485_04586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4114,COG:P,KEGG:K13255,RefSeq:WP_000331559.1,SO:0001217,UniParc:UPI00005F28D4,UniRef:UniRef100_J7QBJ0,UniRef:UniRef50_P39405,UniRef:UniRef90_P39405
contig_1	Pyrodigal	gene	4682046	4682282	.	+	.	ID=GCA000010485_04587_gene;locus_tag=GCA000010485_04587;gene=yjjZ
contig_1	Pyrodigal	CDS	4682046	4682282	.	+	0	ID=GCA000010485_04587;Name=putative protein YjjZ;locus_tag=GCA000010485_04587;product=putative protein YjjZ;gene=yjjZ;Parent=GCA000010485_04587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001360092.1,SO:0001217,UniParc:UPI0001C22F0C,UniRef:UniRef100_A0A0J2BV05,UniRef:UniRef50_P55914,UniRef:UniRef90_P55914
contig_1	tRNAscan-SE	gene	4682321	4682407	.	-	.	ID=GCA000010485_04588_gene;locus_tag=GCA000010485_04588;gene=trnL
contig_1	tRNAscan-SE	tRNA	4682321	4682407	.	-	.	ID=GCA000010485_04588;Name=tRNA-Leu(cag);locus_tag=GCA000010485_04588;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA000010485_04588_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	4682442	4682528	.	-	.	ID=GCA000010485_04589_gene;locus_tag=GCA000010485_04589;gene=trnL
contig_1	tRNAscan-SE	tRNA	4682442	4682528	.	-	.	ID=GCA000010485_04589;Name=tRNA-Leu(cag);locus_tag=GCA000010485_04589;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA000010485_04589_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	4682557	4682643	.	-	.	ID=GCA000010485_04590_gene;locus_tag=GCA000010485_04590;gene=trnL
contig_1	tRNAscan-SE	tRNA	4682557	4682643	.	-	.	ID=GCA000010485_04590;Name=tRNA-Leu(cag);locus_tag=GCA000010485_04590;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA000010485_04590_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Infernal	gene	4682791	4682873	.	+	.	ID=GCA000010485_04591_gene;locus_tag=GCA000010485_04591;gene=naRNA4
contig_1	Infernal	ncRNA	4682791	4682873	3.5e-10	+	.	ID=GCA000010485_04591;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04591;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04591_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4682952	4683983	.	-	.	ID=GCA000010485_04592_gene;locus_tag=GCA000010485_04592;gene=rsmC
contig_1	Pyrodigal	CDS	4682952	4683983	.	-	0	ID=GCA000010485_04592;Name=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;locus_tag=GCA000010485_04592;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;Dbxref=GO:0003676,GO:0005737,GO:0006364,GO:0008990,GO:0052914;gene=rsmC;Parent=GCA000010485_04592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_001272345.1,SO:0001217,UniParc:UPI00005F045A,UniRef:UniRef100_B7LEL6,UniRef:UniRef50_P39406,UniRef:UniRef90_P39406;ec_number=2.1.1.172
contig_1	Pyrodigal	gene	4684086	4684499	.	+	.	ID=GCA000010485_04593_gene;locus_tag=GCA000010485_04593;gene=holD
contig_1	Pyrodigal	CDS	4684086	4684499	.	+	0	ID=GCA000010485_04593;Name=DNA polymerase III subunit psi;locus_tag=GCA000010485_04593;product=DNA polymerase III subunit psi;Dbxref=GO:0003887,GO:0006260,GO:0006261,GO:0008408,GO:0009314,GO:0009360,GO:0030894,GO:0043846;gene=holD;Parent=GCA000010485_04593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3050,COG:L,KEGG:K02344,RefSeq:WP_000204018.1,SO:0001217,UniParc:UPI00000D062C,UniRef:UniRef100_C3SE92,UniRef:UniRef50_P28632,UniRef:UniRef90_P28632;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	4684468	4684914	.	+	.	ID=GCA000010485_04594_gene;locus_tag=GCA000010485_04594;gene=rimI
contig_1	Pyrodigal	CDS	4684468	4684914	.	+	0	ID=GCA000010485_04594;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000010485_04594;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0006474,GO:0008080;gene=rimI;Parent=GCA000010485_04594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_001092465.1,SO:0001217,UniParc:UPI00005AACB6,UniRef:UniRef100_J7QBJ3,UniRef:UniRef50_Q8ZJW4,UniRef:UniRef90_A0A266FFG3;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	4684929	4685606	.	+	.	ID=GCA000010485_04595_gene;locus_tag=GCA000010485_04595;gene=yjjG
contig_1	Pyrodigal	CDS	4684929	4685606	.	+	0	ID=GCA000010485_04595;Name=pyrimidine 5'-nucleotidase;locus_tag=GCA000010485_04595;product=pyrimidine 5'-nucleotidase;Dbxref=GO:0000166,GO:0002953,GO:0005737,GO:0008253,GO:0009410,GO:0016791,GO:0019859,GO:0030145,GO:0043100,GO:0050340,GO:0106411;gene=yjjG;Parent=GCA000010485_04595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,KEGG:K08723,RefSeq:WP_000870712.1,SO:0001217,UniParc:UPI00000DF492,UniRef:UniRef100_E2QLD3,UniRef:UniRef50_P0A8Y1,UniRef:UniRef90_P0A8Y1;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	4685697	4687286	.	+	.	ID=GCA000010485_04596_gene;locus_tag=GCA000010485_04596;gene=prfC
contig_1	Pyrodigal	CDS	4685697	4687286	.	+	0	ID=GCA000010485_04596;Name=peptide chain release factor 3;locus_tag=GCA000010485_04596;product=peptide chain release factor 3;Dbxref=GO:0003747,GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150,GO:0019003,GO:0097216,GO:1990145;gene=prfC;Parent=GCA000010485_04596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_000175943.1,SO:0001217,UniParc:UPI00005E4385,UniRef:UniRef100_A7ZVR5,UniRef:UniRef50_P0A7I4,UniRef:UniRef90_P0A7I4
contig_1	Pyrodigal	gene	4687679	4688284	.	+	.	ID=GCA000010485_04597_gene;locus_tag=GCA000010485_04597;gene=osmY
contig_1	Pyrodigal	CDS	4687679	4688284	.	+	0	ID=GCA000010485_04597;Name=molecular chaperone OsmY;locus_tag=GCA000010485_04597;product=molecular chaperone OsmY;Dbxref=GO:0006970,GO:0006972,GO:0030288,GO:0061077;gene=osmY;Parent=GCA000010485_04597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2823,COG:M,KEGG:K04065,RefSeq:WP_001295748.1,SO:0001217,UniParc:UPI0000130EC0,UniRef:UniRef100_P0AFH8,UniRef:UniRef50_P0AFH8,UniRef:UniRef90_P0AFH8
contig_1	Pyrodigal	gene	4688411	4688572	.	+	.	ID=GCA000010485_04598_gene;locus_tag=GCA000010485_04598;gene=ytjA
contig_1	Pyrodigal	CDS	4688411	4688572	.	+	0	ID=GCA000010485_04598;Name=UPF0391 membrane protein ECA0470;locus_tag=GCA000010485_04598;product=UPF0391 membrane protein ECA0470;Dbxref=GO:0005886;gene=ytjA;Parent=GCA000010485_04598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5487,COG:S,RefSeq:WP_000490275.1,SO:0001217,UniParc:UPI00000502F4,UniRef:UniRef100_Q2M5U1,UniRef:UniRef50_Q2M5U1,UniRef:UniRef90_Q2M5U1
contig_1	Pyrodigal	gene	4688694	4689767	.	+	.	ID=GCA000010485_04599_gene;locus_tag=GCA000010485_04599;gene=yjjU
contig_1	Pyrodigal	CDS	4688694	4689767	.	+	0	ID=GCA000010485_04599;Name=putative protein YjjU;locus_tag=GCA000010485_04599;product=putative protein YjjU;Dbxref=GO:0006974,GO:0016042,GO:0016787;gene=yjjU;Parent=GCA000010485_04599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4667,COG:I,RefSeq:WP_001299799.1,SO:0001217,UniParc:UPI000013B5D5,UniRef:UniRef100_P39407,UniRef:UniRef50_P39407,UniRef:UniRef90_P39407;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	4689764	4690546	.	+	.	ID=GCA000010485_04600_gene;locus_tag=GCA000010485_04600;gene=yjjV
contig_1	Pyrodigal	CDS	4689764	4690546	.	+	0	ID=GCA000010485_04600;Name=metal-dependent hydrolase;locus_tag=GCA000010485_04600;product=metal-dependent hydrolase;Dbxref=GO:0005829,GO:0016788,GO:0046872;gene=yjjV;Parent=GCA000010485_04600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_000563058.1,SO:0001217,UniParc:UPI00005F0C5A,UniRef:UniRef100_W8TTJ6,UniRef:UniRef50_P39408,UniRef:UniRef90_P39408;ec_number=3.1.-.-
contig_1	Infernal	gene	4690643	4690721	.	+	.	ID=GCA000010485_04601_gene;locus_tag=GCA000010485_04601;gene=naRNA4
contig_1	Infernal	ncRNA	4690643	4690721	2.6e-11	+	.	ID=GCA000010485_04601;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04601;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04601_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4690744	4690822	.	+	.	ID=GCA000010485_04602_gene;locus_tag=GCA000010485_04602;gene=naRNA4
contig_1	Infernal	ncRNA	4690744	4690822	1e-11	+	.	ID=GCA000010485_04602;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04602;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04602_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4690845	4690923	.	+	.	ID=GCA000010485_04603_gene;locus_tag=GCA000010485_04603;gene=naRNA4
contig_1	Infernal	ncRNA	4690845	4690923	2e-11	+	.	ID=GCA000010485_04603;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04603;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04603_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Infernal	gene	4690946	4691024	.	+	.	ID=GCA000010485_04604_gene;locus_tag=GCA000010485_04604;gene=naRNA4
contig_1	Infernal	ncRNA	4690946	4691024	1.9e-11	+	.	ID=GCA000010485_04604;Name=Nucleoid-associated noncoding RNA 4 (CssrE);locus_tag=GCA000010485_04604;product=Nucleoid-associated noncoding RNA 4 (CssrE);Dbxref=RFAM:RF02564;Parent=GCA000010485_04604_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02564
contig_1	Pyrodigal	gene	4691063	4691767	.	-	.	ID=GCA000010485_04605_gene;locus_tag=GCA000010485_04605
contig_1	Pyrodigal	CDS	4691063	4691767	.	-	0	ID=GCA000010485_04605;Name=Radical SAM superfamily protein;locus_tag=GCA000010485_04605;product=Radical SAM superfamily protein;Parent=GCA000010485_04605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00025CAE18,UniRef:UniRef100_A0A0K4D8W8,UniRef:UniRef50_A0A0J2BV16,UniRef:UniRef90_A0A0J2BV16
contig_1	Pyrodigal	gene	4691898	4693448	.	-	.	ID=GCA000010485_04606_gene;locus_tag=GCA000010485_04606;gene=yjjI
contig_1	Pyrodigal	CDS	4691898	4693448	.	-	0	ID=GCA000010485_04606;Name=putative protein YjjI;locus_tag=GCA000010485_04606;product=putative protein YjjI;Dbxref=GO:0009061;gene=yjjI;Parent=GCA000010485_04606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001143268.1,SO:0001217,UniParc:UPI0001C22F0E,UniRef:UniRef100_A0A7I0KUA3,UniRef:UniRef50_P37342,UniRef:UniRef90_P37342
contig_1	Pyrodigal	gene	4693707	4694486	.	+	.	ID=GCA000010485_04607_gene;locus_tag=GCA000010485_04607;gene=deoC
contig_1	Pyrodigal	CDS	4693707	4694486	.	+	0	ID=GCA000010485_04607;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000010485_04607;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000010485_04607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,KEGG:K01619,RefSeq:WP_001295412.1,SO:0001217,UniParc:UPI000012919E,UniRef:UniRef100_A7ZVS4,UniRef:UniRef50_P0A6L0,UniRef:UniRef90_P0A6L0;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	4694650	4695972	.	+	.	ID=GCA000010485_04608_gene;locus_tag=GCA000010485_04608;gene=deoA
contig_1	Pyrodigal	CDS	4694650	4695972	.	+	0	ID=GCA000010485_04608;Name=thymidine phosphorylase;locus_tag=GCA000010485_04608;product=thymidine phosphorylase;Dbxref=GO:0004645,GO:0005829,GO:0006206,GO:0006213,GO:0009032,GO:0046104;gene=deoA;Parent=GCA000010485_04608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0213,COG:F,RefSeq:WP_000477831.1,SO:0001217,UniParc:UPI0001C22F0F,UniRef:UniRef100_A0A7I0KUB5,UniRef:UniRef50_P07650,UniRef:UniRef90_P07650;ec_number=2.4.2.4
contig_1	Pyrodigal	gene	4696024	4697247	.	+	.	ID=GCA000010485_04609_gene;locus_tag=GCA000010485_04609;gene=deoB
contig_1	Pyrodigal	CDS	4696024	4697247	.	+	0	ID=GCA000010485_04609;Name=phosphopentomutase;locus_tag=GCA000010485_04609;product=phosphopentomutase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0006015,GO:0006018,GO:0008973,GO:0009117,GO:0030145,GO:0043094;gene=deoB;Parent=GCA000010485_04609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1015,COG:G,KEGG:K01839,RefSeq:WP_000816471.1,SO:0001217,UniParc:UPI00000380EF,UniRef:UniRef100_P0A6K6,UniRef:UniRef50_P0A6K6,UniRef:UniRef90_P0A6K6;ec_number=5.4.2.7
contig_1	Pyrodigal	gene	4697304	4698023	.	+	.	ID=GCA000010485_04610_gene;locus_tag=GCA000010485_04610;gene=deoD
contig_1	Pyrodigal	CDS	4697304	4698023	.	+	0	ID=GCA000010485_04610;Name=purine-nucleoside phosphorylase;locus_tag=GCA000010485_04610;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0005829,GO:0006139,GO:0006152,GO:0047975;gene=deoD;Parent=GCA000010485_04610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000224877.1,SO:0001217,UniParc:UPI00000380EE,UniRef:UniRef100_P0ABP8,UniRef:UniRef50_P0ABP8,UniRef:UniRef90_P0ABP8;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	4698184	4698447	.	-	.	ID=GCA000010485_04611_gene;locus_tag=GCA000010485_04611
contig_1	Pyrodigal	CDS	4698184	4698447	.	-	0	ID=GCA000010485_04611;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000010485_04611;product=HTH cro/C1-type domain-containing protein;Parent=GCA000010485_04611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566247.1,SO:0001217,UniParc:UPI0001885ED1,UniRef:UniRef100_A0A0L7AL60,UniRef:UniRef50_A0A376U2R7,UniRef:UniRef90_A0A370V953
contig_1	Pyrodigal	gene	4698479	4699495	.	-	.	ID=GCA000010485_04612_gene;locus_tag=GCA000010485_04612;gene=lplA
contig_1	Pyrodigal	CDS	4698479	4699495	.	-	0	ID=GCA000010485_04612;Name=lipoate--protein ligase LplA;locus_tag=GCA000010485_04612;product=lipoate--protein ligase LplA;Dbxref=GO:0005524,GO:0005829,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000010485_04612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000209755,BlastRules:WP_000209756,COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000105840.1,SO:0001217,UniParc:UPI0001C22F10,UniRef:UniRef100_A0A7I0KUA7,UniRef:UniRef50_Q8FA49,UniRef:UniRef90_Q8FA49;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	4699523	4700167	.	-	.	ID=GCA000010485_04613_gene;locus_tag=GCA000010485_04613;gene=lplA
contig_1	Pyrodigal	CDS	4699523	4700167	.	-	0	ID=GCA000010485_04613;Name=YtjB family periplasmic protein;locus_tag=GCA000010485_04613;product=YtjB family periplasmic protein;Dbxref=GO:0005524,GO:0005829,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000010485_04613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03800,RefSeq:WP_000124615.1,SO:0001217,UniParc:UPI0000135AC9,UniRef:UniRef100_P60776,UniRef:UniRef50_P60776,UniRef:UniRef90_P60776;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	4700273	4701241	.	+	.	ID=GCA000010485_04614_gene;locus_tag=GCA000010485_04614;gene=serB
contig_1	Pyrodigal	CDS	4700273	4701241	.	+	0	ID=GCA000010485_04614;Name=phosphoserine phosphatase;locus_tag=GCA000010485_04614;product=phosphoserine phosphatase;Dbxref=GO:0000287,GO:0005737,GO:0006564,GO:0008652,GO:0016791,GO:0036424;gene=serB;Parent=GCA000010485_04614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0560,COG:E,KEGG:K01079,RefSeq:WP_001132956.1,SO:0001217,UniParc:UPI00005EEE21,UniRef:UniRef100_J7RCY4,UniRef:UniRef50_P0AGB0,UniRef:UniRef90_P0AGB0;ec_number=3.1.3.3
contig_1	Pyrodigal	gene	4701290	4702672	.	+	.	ID=GCA000010485_04615_gene;locus_tag=GCA000010485_04615;gene=radA
contig_1	Pyrodigal	CDS	4701290	4702672	.	+	0	ID=GCA000010485_04615;Name=DNA repair protein RadA;locus_tag=GCA000010485_04615;product=DNA repair protein RadA;Dbxref=GO:0000725,GO:0003684,GO:0003697,GO:0005524,GO:0006281,GO:0008094,GO:0009314,GO:0016887,GO:0046872,GO:0140664;gene=radA;Parent=GCA000010485_04615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_001029698.1,SO:0001217,UniParc:UPI00000D0639,UniRef:UniRef100_C3SE38,UniRef:UniRef50_P24554,UniRef:UniRef90_P24554;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	4702693	4703925	.	+	.	ID=GCA000010485_04616_gene;locus_tag=GCA000010485_04616;gene=nadR
contig_1	Pyrodigal	CDS	4702693	4703925	.	+	0	ID=GCA000010485_04616;Name=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;locus_tag=GCA000010485_04616;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;Dbxref=GO:0000309,GO:0003677,GO:0005524,GO:0005737,GO:0005886,GO:0009058,GO:0009435,GO:0050262;gene=nadR;Parent=GCA000010485_04616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3172,COG:H,KEGG:K06211,RefSeq:WP_000093833.1,SO:0001217,UniParc:UPI0001885ED5,UniRef:UniRef100_A0A0A1AD85,UniRef:UniRef50_P27278,UniRef:UniRef90_P27278;ec_number=2.7.7.1
contig_1	Pyrodigal	gene	4704017	4704349	.	+	.	ID=GCA000010485_04617_gene;locus_tag=GCA000010485_04617;gene=relE
contig_1	Pyrodigal	CDS	4704017	4704349	.	+	0	ID=GCA000010485_04617;Name=Addiction module toxin RelE;locus_tag=GCA000010485_04617;product=Addiction module toxin RelE;gene=relE;Parent=GCA000010485_04617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001545808.1,SO:0001217,UniParc:UPI0001C22F11,UniRef:UniRef100_A0A7I0KU95,UniRef:UniRef50_E5YNM4,UniRef:UniRef90_A0A0D8VWN8
contig_1	Pyrodigal	gene	4704351	4704635	.	+	.	ID=GCA000010485_04618_gene;locus_tag=GCA000010485_04618;gene=nadS
contig_1	Pyrodigal	CDS	4704351	4704635	.	+	0	ID=GCA000010485_04618;Name=NadS family protein;locus_tag=GCA000010485_04618;product=NadS family protein;gene=nadS;Parent=GCA000010485_04618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000007436.1,SO:0001217,UniParc:UPI00000DF4A2,UniRef:UniRef100_E2QLF1,UniRef:UniRef50_K6Z205,UniRef:UniRef90_E2QLF1
contig_1	Pyrodigal	gene	4704691	4706358	.	-	.	ID=GCA000010485_04619_gene;locus_tag=GCA000010485_04619;gene=ettA
contig_1	Pyrodigal	CDS	4704691	4706358	.	-	0	ID=GCA000010485_04619;Name=energy-dependent translational throttle protein EttA;locus_tag=GCA000010485_04619;product=energy-dependent translational throttle protein EttA;Dbxref=GO:0000049,GO:0003689,GO:0005524,GO:0005737,GO:0006412,GO:0016887,GO:0019843,GO:0043022,GO:0045900,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ettA;Parent=GCA000010485_04619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000046749.1,SO:0001217,UniParc:UPI0000047C8C,UniRef:UniRef100_P0A9W3,UniRef:UniRef50_P0A9W3,UniRef:UniRef90_P0A9W3;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	4706569	4708506	.	+	.	ID=GCA000010485_04620_gene;locus_tag=GCA000010485_04620;gene=sltY
contig_1	Pyrodigal	CDS	4706569	4708506	.	+	0	ID=GCA000010485_04620;Name=murein transglycosylase;locus_tag=GCA000010485_04620;product=murein transglycosylase;Dbxref=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597,GO:0071555;gene=sltY;Parent=GCA000010485_04620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000409419.1,SO:0001217,UniParc:UPI000188857A,UniRef:UniRef100_A0A023KIV2,UniRef:UniRef50_P0AGC3,UniRef:UniRef90_P0AGC3;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	4708626	4708922	.	+	.	ID=GCA000010485_04621_gene;locus_tag=GCA000010485_04621;gene=trpR
contig_1	Pyrodigal	CDS	4708626	4708922	.	+	0	ID=GCA000010485_04621;Name=trp operon repressor;locus_tag=GCA000010485_04621;product=trp operon repressor;Dbxref=GO:0003700,GO:0005737,GO:0006355,GO:0043565,GO:0045892;gene=trpR;Parent=GCA000010485_04621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2973,COG:K,KEGG:K03720,SO:0001217,UniParc:UPI000224554C,UniRef:UniRef100_B7NW74,UniRef:UniRef50_P0A881,UniRef:UniRef90_P0A881
contig_1	Pyrodigal	gene	4708916	4709431	.	-	.	ID=GCA000010485_04622_gene;locus_tag=GCA000010485_04622;gene=yjjX
contig_1	Pyrodigal	CDS	4708916	4709431	.	-	0	ID=GCA000010485_04622;Name=inosine/xanthosine triphosphatase;locus_tag=GCA000010485_04622;product=inosine/xanthosine triphosphatase;Dbxref=GO:0000166,GO:0006772,GO:0009117,GO:0017111,GO:0046872,GO:0103023;gene=yjjX;Parent=GCA000010485_04622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1986,COG:FV,KEGG:K01529,RefSeq:WP_001545810.1,SO:0001217,UniParc:UPI0001C22F13,UniRef:UniRef100_A0A0D8WCJ0,UniRef:UniRef50_P39411,UniRef:UniRef90_P39411;ec_number=3.6.1.73
contig_1	Pyrodigal	gene	4709483	4710130	.	+	.	ID=GCA000010485_04623_gene;locus_tag=GCA000010485_04623;gene=gpmB
contig_1	Pyrodigal	CDS	4709483	4710130	.	+	0	ID=GCA000010485_04623;Name=putative phosphoglycerate mutase GpmB;locus_tag=GCA000010485_04623;product=putative phosphoglycerate mutase GpmB;gene=gpmB;Parent=GCA000010485_04623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000942344.1,SO:0001217,UniParc:UPI000012BA02,UniRef:UniRef100_P0A7A2,UniRef:UniRef90_P0A7A2
contig_1	Pyrodigal	gene	4710127	4710996	.	-	.	ID=GCA000010485_04624_gene;locus_tag=GCA000010485_04624;gene=robA
contig_1	Pyrodigal	CDS	4710127	4710996	.	-	0	ID=GCA000010485_04624;Name=MDR efflux pump AcrAB transcriptional activator RobA;locus_tag=GCA000010485_04624;product=MDR efflux pump AcrAB transcriptional activator RobA;Dbxref=GO:0003700,GO:0043565;gene=robA;Parent=GCA000010485_04624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3708,COG:K,RefSeq:WP_000371666.1,SO:0001217,UniParc:UPI0000134519,UniRef:UniRef100_P0ACI0,UniRef:UniRef50_Q8ZJU7,UniRef:UniRef90_Q8ZJU7
contig_1	Pyrodigal	gene	4711207	4711680	.	+	.	ID=GCA000010485_04625_gene;locus_tag=GCA000010485_04625;gene=creA
contig_1	Pyrodigal	CDS	4711207	4711680	.	+	0	ID=GCA000010485_04625;Name=protein CreA;locus_tag=GCA000010485_04625;product=protein CreA;Dbxref=GO:0005829;gene=creA;Parent=GCA000010485_04625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3045,COG:T,KEGG:K05805,RefSeq:WP_000875487.1,SO:0001217,UniParc:UPI0000128415,UniRef:UniRef100_P0AE91,UniRef:UniRef50_P0AE91,UniRef:UniRef90_P0AE91
contig_1	Pyrodigal	gene	4711693	4712382	.	+	.	ID=GCA000010485_04626_gene;locus_tag=GCA000010485_04626;gene=creB
contig_1	Pyrodigal	CDS	4711693	4712382	.	+	0	ID=GCA000010485_04626;Name=two-component system response regulator CreB;locus_tag=GCA000010485_04626;product=two-component system response regulator CreB;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0000987,GO:0003677,GO:0005829,GO:0006355,GO:0032993,GO:0042802,GO:0045893;gene=creB;Parent=GCA000010485_04626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001188668.1,SO:0001217,UniParc:UPI0001C22F14,UniRef:UniRef100_A0A485JKC3,UniRef:UniRef50_P08368,UniRef:UniRef90_P08368
contig_1	Pyrodigal	gene	4712382	4713806	.	+	.	ID=GCA000010485_04627_gene;locus_tag=GCA000010485_04627;gene=creC
contig_1	Pyrodigal	CDS	4712382	4713806	.	+	0	ID=GCA000010485_04627;Name=two-component system sensor histidine kinase CreC;locus_tag=GCA000010485_04627;product=two-component system sensor histidine kinase CreC;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016020,GO:0016310,GO:0019660;gene=creC;Parent=GCA000010485_04627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001219578.1,SO:0001217,UniParc:UPI0001C22F15,UniRef:UniRef100_A0A0D8W9R8,UniRef:UniRef50_P08401,UniRef:UniRef90_P08401;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	4713864	4715216	.	+	.	ID=GCA000010485_04628_gene;locus_tag=GCA000010485_04628;gene=creD
contig_1	Pyrodigal	CDS	4713864	4715216	.	+	0	ID=GCA000010485_04628;Name=cell envelope integrity protein CreD;locus_tag=GCA000010485_04628;product=cell envelope integrity protein CreD;Dbxref=GO:0005886;gene=creD;Parent=GCA000010485_04628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06143,RefSeq:WP_000920353.1,SO:0001217,UniParc:UPI0001C22F16,UniRef:UniRef100_A0A7I0KW03,UniRef:UniRef50_P08369,UniRef:UniRef90_P08369
contig_1	Pyrodigal	gene	4715276	4715992	.	-	.	ID=GCA000010485_04629_gene;locus_tag=GCA000010485_04629;gene=arcA
contig_1	Pyrodigal	CDS	4715276	4715992	.	-	0	ID=GCA000010485_04629;Name=two-component system response regulator ArcA;locus_tag=GCA000010485_04629;product=two-component system response regulator ArcA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=arcA;Parent=GCA000010485_04629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,KEGG:K07773,RefSeq:WP_001194358.1,SO:0001217,UniParc:UPI0000125D8C,UniRef:UniRef100_P0A9Q1,UniRef:UniRef50_P0A9Q1,UniRef:UniRef90_P0A9Q1
contig_1	Pyrodigal	gene	4716628	4717314	.	+	.	ID=GCA000010485_04630_gene;locus_tag=GCA000010485_04630;gene=lasT
contig_1	Pyrodigal	CDS	4716628	4717314	.	+	0	ID=GCA000010485_04630;Name=tRNA/rRNA methyltransferase;locus_tag=GCA000010485_04630;product=tRNA/rRNA methyltransferase;Dbxref=GO:0002128,GO:0003723,GO:0005829,GO:0008173,GO:0042803;gene=lasT;Parent=GCA000010485_04630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0565,COG:J,RefSeq:WP_001223154.1,SO:0001217,UniParc:UPI0001C22F17,UniRef:UniRef100_A0A2W0H931,UniRef:UniRef50_P37005,UniRef:UniRef90_P37005;ec_number=2.1.1.-
##sequence-region contig_2 1 122345
contig_2	Bakta	region	1	122345	.	+	.	ID=contig_2;Name=contig_2;Is_circular=true
contig_2	Pyrodigal	gene	1	1959	.	+	.	ID=GCA000010485_04631_gene;locus_tag=GCA000010485_04631
contig_2	Pyrodigal	CDS	1	1959	.	+	0	ID=GCA000010485_04631;Name=ParB/Sulfiredoxin domain-containing protein;locus_tag=GCA000010485_04631;product=ParB/Sulfiredoxin domain-containing protein;pseudo=True;Parent=GCA000010485_04631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03497,SO:0001217,UniRef:UniRef50_A0A5U9SVK0,UniRef:UniRef90_A0A5U9SVK0
contig_2	Pyrodigal	gene	2014	2448	.	+	.	ID=GCA000010485_04632_gene;locus_tag=GCA000010485_04632;gene=psiB
contig_2	Pyrodigal	CDS	2014	2448	.	+	0	ID=GCA000010485_04632;Name=conjugation system SOS inhibitor PsiB;locus_tag=GCA000010485_04632;product=conjugation system SOS inhibitor PsiB;gene=psiB;Parent=GCA000010485_04632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000845910.1,SO:0001217,UniParc:UPI00005EFB9B,UniRef:UniRef100_C8CGP0,UniRef:UniRef50_P10032,UniRef:UniRef90_C8CGP0
contig_2	Pyrodigal	gene	2445	3164	.	+	.	ID=GCA000010485_04633_gene;locus_tag=GCA000010485_04633;gene=psiA
contig_2	Pyrodigal	CDS	2445	3164	.	+	0	ID=GCA000010485_04633;Name=Protein PsiA;locus_tag=GCA000010485_04633;product=Protein PsiA;gene=psiA;Parent=GCA000010485_04633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001276230.1,SO:0001217,UniParc:UPI00005EFB9A,UniRef:UniRef100_C8CGP1,UniRef:UniRef50_P18148,UniRef:UniRef90_P18148
contig_2	Infernal	gene	3271	3442	.	+	.	ID=GCA000010485_04634_gene;locus_tag=GCA000010485_04634;gene=sok
contig_2	Infernal	ncRNA	3271	3442	3.5e-14	+	.	ID=GCA000010485_04634;Name=sok antitoxin (CssrC);locus_tag=GCA000010485_04634;product=sok antitoxin (CssrC);Dbxref=RFAM:RF01794;Parent=GCA000010485_04634_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01794
contig_2	Pyrodigal	gene	3382	3594	.	+	.	ID=GCA000010485_04635_gene;locus_tag=GCA000010485_04635;gene=flmC
contig_2	Pyrodigal	CDS	3382	3594	.	+	0	ID=GCA000010485_04635;Name=Protein FlmC;locus_tag=GCA000010485_04635;product=Protein FlmC;gene=flmC;Parent=GCA000010485_04635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000D50F88,UniRef:UniRef100_A0A0J1XFC0,UniRef:UniRef50_P11519,UniRef:UniRef90_P11519
contig_2	Pyrodigal	gene	4514	4801	.	+	.	ID=GCA000010485_04636_gene;locus_tag=GCA000010485_04636;gene=yubO
contig_2	Pyrodigal	CDS	4514	4801	.	+	0	ID=GCA000010485_04636;Name=putative protein YubO;locus_tag=GCA000010485_04636;product=putative protein YubO;gene=yubO;Parent=GCA000010485_04636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000107526.1,SO:0001217,UniParc:UPI00005EFB99,UniRef:UniRef100_G4VUI7,UniRef:UniRef50_Q02885,UniRef:UniRef90_Q02885
contig_2	Pyrodigal	gene	4920	5741	.	+	.	ID=GCA000010485_04637_gene;locus_tag=GCA000010485_04637;gene=yubP
contig_2	Pyrodigal	CDS	4920	5741	.	+	0	ID=GCA000010485_04637;Name=UPF0380 protein YubP;locus_tag=GCA000010485_04637;product=UPF0380 protein YubP;gene=yubP;Parent=GCA000010485_04637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001234489.1,SO:0001217,UniParc:UPI00005EFB98,UniRef:UniRef100_A0A5T4MUF9,UniRef:UniRef50_P18005,UniRef:UniRef90_P18005
contig_2	Pyrodigal	gene	6037	6546	.	-	.	ID=GCA000010485_04638_gene;locus_tag=GCA000010485_04638;gene=yubQ
contig_2	Pyrodigal	CDS	6037	6546	.	-	0	ID=GCA000010485_04638;Name=X polypeptide;locus_tag=GCA000010485_04638;product=X polypeptide;gene=yubQ;Parent=GCA000010485_04638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000759167.1,SO:0001217,UniParc:UPI0000D50F89,UniRef:UniRef100_A0A332KI73,UniRef:UniRef50_P47737,UniRef:UniRef90_P47737
contig_2	BLAST+	oriT	6522	6971	.	?	.	ID=EFPPCJGBKI_4835;Name=origin of transfer;Note=origin of transfer
contig_2	Pyrodigal	gene	6970	7353	.	+	.	ID=GCA000010485_04639_gene;locus_tag=GCA000010485_04639;gene=traM
contig_2	Pyrodigal	CDS	6970	7353	.	+	0	ID=GCA000010485_04639;Name=conjugal transfer relaxosome DNA-binding protein TraM;locus_tag=GCA000010485_04639;product=conjugal transfer relaxosome DNA-binding protein TraM;Dbxref=GO:0003677,GO:0005737;gene=traM;Parent=GCA000010485_04639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001151562.1,SO:0001217,UniParc:UPI0000D50F8A,UniRef:UniRef100_C8CGP6,UniRef:UniRef50_P07294,UniRef:UniRef90_P07294
contig_2	Infernal	regulatory_region	7444	7552	5e-21	+	.	ID=EFPPCJGBKI_332;Name=traJ 5' UTR;product=traJ 5' UTR;Dbxref=RFAM:RF00243;inference=profile:Rfam:RF00243;Note=SO:0005836;regulatory_class=other
contig_2	Infernal	gene	7477	7553	.	-	.	ID=GCA000010485_04640_gene;locus_tag=GCA000010485_04640;gene=finP
contig_2	Infernal	ncRNA	7477	7553	4.4e-16	-	.	ID=GCA000010485_04640;Name=FinP;locus_tag=GCA000010485_04640;gene=finP;product=FinP;Dbxref=RFAM:RF00107;Parent=GCA000010485_04640_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00107
contig_2	Pyrodigal	gene	7547	8233	.	+	.	ID=GCA000010485_04641_gene;locus_tag=GCA000010485_04641;gene=traJ
contig_2	Pyrodigal	CDS	7547	8233	.	+	0	ID=GCA000010485_04641;Name=Protein TraJ;locus_tag=GCA000010485_04641;product=Protein TraJ;Dbxref=GO:0005737,GO:0006355;gene=traJ;Parent=GCA000010485_04641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000332487.1,SO:0001217,UniParc:UPI000176C306,UniRef:UniRef100_P05837,UniRef:UniRef50_P05837,UniRef:UniRef90_P05837
contig_2	Pyrodigal	gene	8369	8470	.	-	.	ID=GCA000010485_04642_gene;locus_tag=GCA000010485_04642
contig_2	Pyrodigal	CDS	8369	8470	.	-	0	ID=GCA000010485_04642;Name=hypothetical protein;locus_tag=GCA000010485_04642;product=hypothetical protein;Parent=GCA000010485_04642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000390FEE2,UniRef:UniRef100_A0A377YUZ1,UniRef:UniRef50_A0A377YUZ1,UniRef:UniRef90_A0A377YUZ1
contig_2	Pyrodigal	gene	8588	8947	.	+	.	ID=GCA000010485_04643_gene;locus_tag=GCA000010485_04643;gene=traA
contig_2	Pyrodigal	CDS	8588	8947	.	+	0	ID=GCA000010485_04643;Name=type IV conjugative transfer system pilin TraA;locus_tag=GCA000010485_04643;product=type IV conjugative transfer system pilin TraA;gene=traA;Parent=GCA000010485_04643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001098988.1,SO:0001217,UniParc:UPI0000D50F8C,UniRef:UniRef100_C8CGP8,UniRef:UniRef50_P04737,UniRef:UniRef90_C8CGP8
contig_2	Pyrodigal	gene	8962	9273	.	+	.	ID=GCA000010485_04644_gene;locus_tag=GCA000010485_04644;gene=traL
contig_2	Pyrodigal	CDS	8962	9273	.	+	0	ID=GCA000010485_04644;Name=Protein TraL;locus_tag=GCA000010485_04644;product=Protein TraL;gene=traL;Parent=GCA000010485_04644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000012100.1,SO:0001217,UniParc:UPI00005EFB95,UniRef:UniRef100_C8CGP9,UniRef:UniRef90_C8CGP9
contig_2	Pyrodigal	gene	9295	9861	.	+	.	ID=GCA000010485_04645_gene;locus_tag=GCA000010485_04645;gene=traE
contig_2	Pyrodigal	CDS	9295	9861	.	+	0	ID=GCA000010485_04645;Name=type IV conjugative transfer system protein TraE;locus_tag=GCA000010485_04645;product=type IV conjugative transfer system protein TraE;gene=traE;Parent=GCA000010485_04645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12067,RefSeq:WP_000399776.1,SO:0001217,UniParc:UPI00005EFB94,UniRef:UniRef100_C8CGQ0,UniRef:UniRef50_P08322,UniRef:UniRef90_Q08JH0
contig_2	Pyrodigal	gene	9848	10576	.	+	.	ID=GCA000010485_04646_gene;locus_tag=GCA000010485_04646;gene=traK
contig_2	Pyrodigal	CDS	9848	10576	.	+	0	ID=GCA000010485_04646;Name=type-F conjugative transfer system secretin TraK;locus_tag=GCA000010485_04646;product=type-F conjugative transfer system secretin TraK;Dbxref=GO:0005886;gene=traK;Parent=GCA000010485_04646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12066,RefSeq:WP_001230787.1,SO:0001217,UniParc:UPI0000003DAE,UniRef:UniRef100_P41066,UniRef:UniRef50_P41066,UniRef:UniRef90_P41066
contig_2	Pyrodigal	gene	10576	12003	.	+	.	ID=GCA000010485_04647_gene;locus_tag=GCA000010485_04647;gene=traB
contig_2	Pyrodigal	CDS	10576	12003	.	+	0	ID=GCA000010485_04647;Name=F-type conjugal transfer pilus assembly protein TraB;locus_tag=GCA000010485_04647;product=F-type conjugal transfer pilus assembly protein TraB;Dbxref=GO:0016887;gene=traB;Parent=GCA000010485_04647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12065,RefSeq:WP_000146665.1,SO:0001217,UniParc:UPI00005EFB92,UniRef:UniRef100_A0A0J2CVA4,UniRef:UniRef50_P41067,UniRef:UniRef90_P41067
contig_2	Pyrodigal	gene	11993	12583	.	+	.	ID=GCA000010485_04648_gene;locus_tag=GCA000010485_04648;gene=traP
contig_2	Pyrodigal	CDS	11993	12583	.	+	0	ID=GCA000010485_04648;Name=conjugal transfer pilus-stabilizing protein TraP;locus_tag=GCA000010485_04648;product=conjugal transfer pilus-stabilizing protein TraP;gene=traP;Parent=GCA000010485_04648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12065,RefSeq:WP_000002787.1,SO:0001217,UniParc:UPI00005EFB91,UniRef:UniRef100_A0A811ASD7,UniRef:UniRef50_A0A811ASD7,UniRef:UniRef90_A0A811ASD7
contig_2	Pyrodigal	gene	12570	12890	.	+	.	ID=GCA000010485_04649_gene;locus_tag=GCA000010485_04649
contig_2	Pyrodigal	CDS	12570	12890	.	+	0	ID=GCA000010485_04649;Name=DUF2689 domain-containing protein;locus_tag=GCA000010485_04649;product=DUF2689 domain-containing protein;Parent=GCA000010485_04649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001057274.1,SO:0001217,UniParc:UPI000176C305,UniRef:UniRef100_C8CGQ4,UniRef:UniRef50_A0A836N5P0,UniRef:UniRef90_A0A731YAR8
contig_2	Pyrodigal	gene	13132	13647	.	+	.	ID=GCA000010485_04650_gene;locus_tag=GCA000010485_04650;gene=traV
contig_2	Pyrodigal	CDS	13132	13647	.	+	0	ID=GCA000010485_04650;Name=type IV conjugative transfer system lipoprotein TraV;locus_tag=GCA000010485_04650;product=type IV conjugative transfer system lipoprotein TraV;gene=traV;Parent=GCA000010485_04650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12064,RefSeq:WP_000809889.1,SO:0001217,UniParc:UPI00005EFB90,UniRef:UniRef100_C8CGQ5,UniRef:UniRef50_C8CGQ5,UniRef:UniRef90_C8CGQ5
contig_2	Pyrodigal	gene	13782	14003	.	+	.	ID=GCA000010485_04651_gene;locus_tag=GCA000010485_04651;gene=traR
contig_2	Pyrodigal	CDS	13782	14003	.	+	0	ID=GCA000010485_04651;Name=conjugal transfer protein TraR;locus_tag=GCA000010485_04651;product=conjugal transfer protein TraR;gene=traR;Parent=GCA000010485_04651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001278694.1,SO:0001217,UniParc:UPI0000D50F8F,UniRef:UniRef100_A0A0C5EWV6,UniRef:UniRef50_P41065,UniRef:UniRef90_I1WZS6
contig_2	Pyrodigal	gene	13996	14469	.	+	.	ID=GCA000010485_04652_gene;locus_tag=GCA000010485_04652;gene=yafA
contig_2	Pyrodigal	CDS	13996	14469	.	+	0	ID=GCA000010485_04652;Name=Protein YafA;locus_tag=GCA000010485_04652;product=Protein YafA;gene=yafA;Parent=GCA000010485_04652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549566.1,SO:0001217,UniParc:UPI0000D50F90,UniRef:UniRef100_C8CGQ6,UniRef:UniRef50_A0AAP6R3P4,UniRef:UniRef90_A0AAP6R3P4
contig_2	Pyrodigal	gene	14515	14976	.	-	.	ID=GCA000010485_04653_gene;locus_tag=GCA000010485_04653
contig_2	Pyrodigal	CDS	14515	14976	.	-	0	ID=GCA000010485_04653;Name=hypothetical protein;locus_tag=GCA000010485_04653;product=hypothetical protein;Parent=GCA000010485_04653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000245E994,UniRef:UniRef100_A0A0J2DVY1,UniRef:UniRef50_A0A0J2DVY1,UniRef:UniRef90_A0A0J2DVY1
contig_2	Pyrodigal	gene	15134	17764	.	+	.	ID=GCA000010485_04654_gene;locus_tag=GCA000010485_04654;gene=traC
contig_2	Pyrodigal	CDS	15134	17764	.	+	0	ID=GCA000010485_04654;Name=type IV secretion system protein TraC;locus_tag=GCA000010485_04654;product=type IV secretion system protein TraC;Dbxref=GO:0005886;gene=traC;Parent=GCA000010485_04654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12063,RefSeq:WP_000069778.1,SO:0001217,UniParc:UPI00005EFB8E,UniRef:UniRef100_C8CGQ7,UniRef:UniRef50_P18004,UniRef:UniRef90_P18004
contig_2	Pyrodigal	gene	17761	18147	.	+	.	ID=GCA000010485_04655_gene;locus_tag=GCA000010485_04655;gene=trbI
contig_2	Pyrodigal	CDS	17761	18147	.	+	0	ID=GCA000010485_04655;Name=type-F conjugative transfer system protein TrbI;locus_tag=GCA000010485_04655;product=type-F conjugative transfer system protein TrbI;gene=trbI;Parent=GCA000010485_04655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214082.1,SO:0001217,UniParc:UPI00005EFB8D,UniRef:UniRef100_D9Z587,UniRef:UniRef50_P18006,UniRef:UniRef90_A0A0M1UJ03
contig_2	Pyrodigal	gene	18144	18776	.	+	.	ID=GCA000010485_04656_gene;locus_tag=GCA000010485_04656;gene=traW
contig_2	Pyrodigal	CDS	18144	18776	.	+	0	ID=GCA000010485_04656;Name=type-F conjugative transfer system protein TraW;locus_tag=GCA000010485_04656;product=type-F conjugative transfer system protein TraW;Dbxref=GO:0042597;gene=traW;Parent=GCA000010485_04656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12061,RefSeq:WP_001203736.1,SO:0001217,UniParc:UPI00005EFB8C,UniRef:UniRef100_B7LJ43,UniRef:UniRef50_P18472,UniRef:UniRef90_P18472
contig_2	Pyrodigal	gene	18773	19765	.	+	.	ID=GCA000010485_04657_gene;locus_tag=GCA000010485_04657;gene=traU
contig_2	Pyrodigal	CDS	18773	19765	.	+	0	ID=GCA000010485_04657;Name=conjugal transfer pilus assembly protein TraU;locus_tag=GCA000010485_04657;product=conjugal transfer pilus assembly protein TraU;Dbxref=GO:0042597;gene=traU;Parent=GCA000010485_04657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12060,RefSeq:WP_000830838.1,SO:0001217,UniParc:UPI00000B7CA8,UniRef:UniRef100_D9Z589,UniRef:UniRef50_P18471,UniRef:UniRef90_P18471
contig_2	Pyrodigal	gene	19795	20100	.	+	.	ID=GCA000010485_04658_gene;locus_tag=GCA000010485_04658
contig_2	Pyrodigal	CDS	19795	20100	.	+	0	ID=GCA000010485_04658;Name=Conjugative transfer protein;locus_tag=GCA000010485_04658;product=Conjugative transfer protein;Parent=GCA000010485_04658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000224418.1,SO:0001217,UniParc:UPI000176C30F,UniRef:UniRef100_G3K1J1,UniRef:UniRef50_Q08JF9,UniRef:UniRef90_Q08JF9
contig_2	Pyrodigal	gene	20109	20747	.	+	.	ID=GCA000010485_04659_gene;locus_tag=GCA000010485_04659;gene=trbC
contig_2	Pyrodigal	CDS	20109	20747	.	+	0	ID=GCA000010485_04659;Name=type-F conjugative transfer system pilin assembly protein TrbC;locus_tag=GCA000010485_04659;product=type-F conjugative transfer system pilin assembly protein TrbC;gene=trbC;Parent=GCA000010485_04659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080251.1,SO:0001217,UniParc:UPI0000D50F93,UniRef:UniRef100_A0AAN3NWA7,UniRef:UniRef50_P18473,UniRef:UniRef90_A0A1Y1CS42
contig_2	Pyrodigal	gene	20744	22594	.	+	.	ID=GCA000010485_04660_gene;locus_tag=GCA000010485_04660;gene=traN
contig_2	Pyrodigal	CDS	20744	22594	.	+	0	ID=GCA000010485_04660;Name=type-F conjugative transfer system mating-pair stabilization protein TraN;locus_tag=GCA000010485_04660;product=type-F conjugative transfer system mating-pair stabilization protein TraN;gene=traN;Parent=GCA000010485_04660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000821859.1,SO:0001217,UniParc:UPI00005EFB8A,UniRef:UniRef100_C8CGR3,UniRef:UniRef50_P24082,UniRef:UniRef90_A0A2X3JUC2
contig_2	Pyrodigal	gene	22621	22878	.	+	.	ID=GCA000010485_04661_gene;locus_tag=GCA000010485_04661;gene=trbE
contig_2	Pyrodigal	CDS	22621	22878	.	+	0	ID=GCA000010485_04661;Name=Conjugal transfer protein TrbE;locus_tag=GCA000010485_04661;product=Conjugal transfer protein TrbE;gene=trbE;Parent=GCA000010485_04661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000864314.1,SO:0001217,UniParc:UPI000176C304,UniRef:UniRef100_C8CGR4,UniRef:UniRef50_Q05807,UniRef:UniRef90_A0A3P5HEZ3
contig_2	Pyrodigal	gene	22871	23614	.	+	.	ID=GCA000010485_04662_gene;locus_tag=GCA000010485_04662;gene=traF
contig_2	Pyrodigal	CDS	22871	23614	.	+	0	ID=GCA000010485_04662;Name=type-F conjugative transfer system pilin assembly protein TraF;locus_tag=GCA000010485_04662;product=type-F conjugative transfer system pilin assembly protein TraF;Dbxref=GO:0042597;gene=traF;Parent=GCA000010485_04662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030385.1,SO:0001217,UniParc:UPI000176C2FD,UniRef:UniRef100_A0A2P9DUV3,UniRef:UniRef50_P14497,UniRef:UniRef90_P14497
contig_2	Pyrodigal	gene	23628	23969	.	+	.	ID=GCA000010485_04663_gene;locus_tag=GCA000010485_04663;gene=trbA
contig_2	Pyrodigal	CDS	23628	23969	.	+	0	ID=GCA000010485_04663;Name=conjugal transfer protein TrbA;locus_tag=GCA000010485_04663;product=conjugal transfer protein TrbA;gene=trbA;Parent=GCA000010485_04663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298557.1,SO:0001217,UniParc:UPI0000D50F95,UniRef:UniRef100_C8CGR6,UniRef:UniRef50_B1VCA2,UniRef:UniRef90_Q6SJ05
contig_2	Pyrodigal	gene	23950	24285	.	-	.	ID=GCA000010485_04664_gene;locus_tag=GCA000010485_04664;gene=artA
contig_2	Pyrodigal	CDS	23950	24285	.	-	0	ID=GCA000010485_04664;Name=ArtA protein;locus_tag=GCA000010485_04664;product=ArtA protein;gene=artA;Parent=GCA000010485_04664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000736414.1,SO:0001217,UniParc:UPI0000D50F96,UniRef:UniRef100_G3G3T0,UniRef:UniRef50_P18032,UniRef:UniRef90_B1VCA3
contig_2	Pyrodigal	gene	24366	24650	.	+	.	ID=GCA000010485_04665_gene;locus_tag=GCA000010485_04665;gene=traQ
contig_2	Pyrodigal	CDS	24366	24650	.	+	0	ID=GCA000010485_04665;Name=type-F conjugative transfer system pilin chaperone TraQ;locus_tag=GCA000010485_04665;product=type-F conjugative transfer system pilin chaperone TraQ;Dbxref=GO:0005886;gene=traQ;Parent=GCA000010485_04665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624107.1,SO:0001217,UniParc:UPI0000D50F97,UniRef:UniRef100_C8CGR7,UniRef:UniRef50_P18033,UniRef:UniRef90_P18033
contig_2	Pyrodigal	gene	24637	25182	.	+	.	ID=GCA000010485_04666_gene;locus_tag=GCA000010485_04666;gene=trbB
contig_2	Pyrodigal	CDS	24637	25182	.	+	0	ID=GCA000010485_04666;Name=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;locus_tag=GCA000010485_04666;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;gene=trbB;Parent=GCA000010485_04666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000059830.1,SO:0001217,UniParc:UPI00005EFB87,UniRef:UniRef100_C8CGR8,UniRef:UniRef50_P18035,UniRef:UniRef90_H1ZXS1
contig_2	Pyrodigal	gene	25172	25459	.	+	.	ID=GCA000010485_04667_gene;locus_tag=GCA000010485_04667;gene=trbJ
contig_2	Pyrodigal	CDS	25172	25459	.	+	0	ID=GCA000010485_04667;Name=P-type conjugative transfer protein TrbJ;locus_tag=GCA000010485_04667;product=P-type conjugative transfer protein TrbJ;gene=trbJ;Parent=GCA000010485_04667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001244885.1,SO:0001217,UniParc:UPI00000B0F22,UniRef:UniRef100_C8CGR9,UniRef:UniRef50_A0A078LIB3,UniRef:UniRef90_A0A2S1J9F7
contig_2	Pyrodigal	gene	25440	25832	.	+	.	ID=GCA000010485_04668_gene;locus_tag=GCA000010485_04668;gene=trbF
contig_2	Pyrodigal	CDS	25440	25832	.	+	0	ID=GCA000010485_04668;Name=F-type conjugal transfer protein TrbF;locus_tag=GCA000010485_04668;product=F-type conjugal transfer protein TrbF;gene=trbF;Parent=GCA000010485_04668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000660700.1,SO:0001217,UniParc:UPI000176C303,UniRef:UniRef100_A0A135PL40,UniRef:UniRef50_P15068,UniRef:UniRef90_A0A135PL40
contig_2	Pyrodigal	gene	25819	27192	.	+	.	ID=GCA000010485_04669_gene;locus_tag=GCA000010485_04669;gene=traH
contig_2	Pyrodigal	CDS	25819	27192	.	+	0	ID=GCA000010485_04669;Name=conjugal transfer pilus assembly protein TraH;locus_tag=GCA000010485_04669;product=conjugal transfer pilus assembly protein TraH;gene=traH;Parent=GCA000010485_04669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12072,RefSeq:WP_000944331.1,SO:0001217,UniParc:UPI00000BB951,UniRef:UniRef100_B8XWS3,UniRef:UniRef50_Q65AG4,UniRef:UniRef90_A0A377YWJ4
contig_2	Pyrodigal	gene	27189	30011	.	+	.	ID=GCA000010485_04670_gene;locus_tag=GCA000010485_04670;gene=traG
contig_2	Pyrodigal	CDS	27189	30011	.	+	0	ID=GCA000010485_04670;Name=conjugal transfer mating-pair stabilization protein TraG;locus_tag=GCA000010485_04670;product=conjugal transfer mating-pair stabilization protein TraG;gene=traG;Parent=GCA000010485_04670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12056,RefSeq:WP_001007080.1,SO:0001217,UniParc:UPI00005EFB86,UniRef:UniRef100_C8CGS2,UniRef:UniRef50_A0A2H5C938,UniRef:UniRef90_A0A2H5C938
contig_2	Infernal	gene	27908	27993	.	-	.	ID=GCA000010485_04671_gene;locus_tag=GCA000010485_04671;gene=AS-traG
contig_2	Infernal	ncRNA	27908	27993	3.9e-10	-	.	ID=GCA000010485_04671;Name=Antisense to traG;locus_tag=GCA000010485_04671;product=Antisense to traG;Dbxref=RFAM:RF02874;Parent=GCA000010485_04671_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02874
contig_2	Pyrodigal	gene	30033	30512	.	+	.	ID=GCA000010485_04672_gene;locus_tag=GCA000010485_04672
contig_2	Pyrodigal	CDS	30033	30512	.	+	0	ID=GCA000010485_04672;Name=Surface exclusion protein;locus_tag=GCA000010485_04672;product=Surface exclusion protein;Parent=GCA000010485_04672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001363115.1,SO:0001217,UniParc:UPI000245E8EB,UniRef:UniRef100_A0A332KHT1,UniRef:UniRef50_Q93GM0,UniRef:UniRef90_Q08JE7
contig_2	Pyrodigal	gene	30561	31292	.	+	.	ID=GCA000010485_04673_gene;locus_tag=GCA000010485_04673;gene=traT
contig_2	Pyrodigal	CDS	30561	31292	.	+	0	ID=GCA000010485_04673;Name=conjugal transfer complement resistance protein TraT;locus_tag=GCA000010485_04673;product=conjugal transfer complement resistance protein TraT;Dbxref=GO:0009279;gene=traT;Parent=GCA000010485_04673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AAL23506.1,RefSeq:WP_000782451.1,SO:0001217,UniParc:UPI0000000F4C,UniRef:UniRef100_P32885,UniRef:UniRef50_P13979,UniRef:UniRef90_P13979
contig_2	Pyrodigal	gene	31495	32232	.	+	.	ID=GCA000010485_04674_gene;locus_tag=GCA000010485_04674
contig_2	Pyrodigal	CDS	31495	32232	.	+	0	ID=GCA000010485_04674;Name=Conjugative transfer protein;locus_tag=GCA000010485_04674;product=Conjugative transfer protein;Parent=GCA000010485_04674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000199901.1,SO:0001217,UniParc:UPI000176C2FB,UniRef:UniRef100_A0A5T4MUQ6,UniRef:UniRef50_G3G3T9,UniRef:UniRef90_G3G3T9
contig_2	Pyrodigal	gene	32283	32480	.	+	.	ID=GCA000010485_04675_gene;locus_tag=GCA000010485_04675;gene=traD
contig_2	Pyrodigal	CDS	32283	32480	.	+	0	ID=GCA000010485_04675;Name=Truncated TraD;locus_tag=GCA000010485_04675;product=Truncated TraD;gene=traD;Parent=GCA000010485_04675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009376.1,SO:0001217,UniParc:UPI0001C06563,UniRef:UniRef100_UPI0001C06563,UniRef:UniRef50_A0A377EBR9,UniRef:UniRef90_UPI0001C06563
contig_2	Pyrodigal	gene	32495	32920	.	+	.	ID=GCA000010485_04676_gene;locus_tag=GCA000010485_04676;gene=tnpA
contig_2	Pyrodigal	CDS	32495	32920	.	+	0	ID=GCA000010485_04676;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_04676;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_04676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_2	Pyrodigal	gene	32917	33267	.	+	.	ID=GCA000010485_04677_gene;locus_tag=GCA000010485_04677;gene=tnpB
contig_2	Pyrodigal	CDS	32917	33267	.	+	0	ID=GCA000010485_04677;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_04677;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_04677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_2	Pyrodigal	gene	33298	34911	.	+	.	ID=GCA000010485_04678_gene;locus_tag=GCA000010485_04678;gene=tnp
contig_2	Pyrodigal	CDS	33298	34911	.	+	0	ID=GCA000010485_04678;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_04678;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_2	Pyrodigal	gene	34985	36967	.	+	.	ID=GCA000010485_04679_gene;locus_tag=GCA000010485_04679;gene=traD
contig_2	Pyrodigal	CDS	34985	36967	.	+	0	ID=GCA000010485_04679;Name=type IV conjugative transfer system coupling protein TraD;locus_tag=GCA000010485_04679;product=type IV conjugative transfer system coupling protein TraD;gene=traD;Parent=GCA000010485_04679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A3Q8D5F7,UniRef:UniRef90_UPI0004A12DEB
contig_2	Pyrodigal	gene	36967	42237	.	+	.	ID=GCA000010485_04680_gene;locus_tag=GCA000010485_04680;gene=traI
contig_2	Pyrodigal	CDS	36967	42237	.	+	0	ID=GCA000010485_04680;Name=conjugative transfer relaxase/helicase TraI;locus_tag=GCA000010485_04680;product=conjugative transfer relaxase/helicase TraI;Dbxref=GO:0003678;gene=traI;Parent=GCA000010485_04680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000948349.1,SO:0001217,UniParc:UPI00005EFB83,UniRef:UniRef100_C8CGS7,UniRef:UniRef50_A0A759YQ43,UniRef:UniRef90_Q6SIZ4;ec_number=3.6.4.12
contig_2	Infernal	gene	39816	39892	.	-	.	ID=GCA000010485_04681_gene;locus_tag=GCA000010485_04681;gene=AS-traI
contig_2	Infernal	ncRNA	39816	39892	1.5e-17	-	.	ID=GCA000010485_04681;Name=Antisense to traI;locus_tag=GCA000010485_04681;product=Antisense to traI;Dbxref=RFAM:RF02873;Parent=GCA000010485_04681_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02873
contig_2	Pyrodigal	gene	42257	43003	.	+	.	ID=GCA000010485_04682_gene;locus_tag=GCA000010485_04682;gene=traX
contig_2	Pyrodigal	CDS	42257	43003	.	+	0	ID=GCA000010485_04682;Name=conjugal transfer pilus acetylase TraX;locus_tag=GCA000010485_04682;product=conjugal transfer pilus acetylase TraX;Dbxref=GO:0005886;gene=traX;Parent=GCA000010485_04682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205725.1,SO:0001217,UniParc:UPI0000000F4E,UniRef:UniRef100_P22710,UniRef:UniRef50_P22710,UniRef:UniRef90_P22710
contig_2	Bakta	gene	43009	43065	.	+	.	ID=GCA000010485_04683_gene;locus_tag=GCA000010485_04683;inference=ab initio prediction:Bakta
contig_2	Bakta	CDS	43009	43065	.	+	0	ID=GCA000010485_04683;Name=Tn2 Family: Tn3 mobile element protein;locus_tag=GCA000010485_04683;product=Tn2 Family: Tn3 mobile element protein;Parent=GCA000010485_04683_gene;Note=SO:0001217,UniParc:UPI0005D8E68C,UniRef:UniRef100_A0A0C5PCA6,UniRef:UniRef50_A0A5B8HMR0,UniRef:UniRef90_A0A0C5PCA6
contig_2	Pyrodigal	gene	43062	43922	.	+	.	ID=GCA000010485_04684_gene;locus_tag=GCA000010485_04684
contig_2	Pyrodigal	CDS	43062	43922	.	+	0	ID=GCA000010485_04684;Name=putative protein in traX-finO intergenic region;locus_tag=GCA000010485_04684;product=putative protein in traX-finO intergenic region;Parent=GCA000010485_04684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704523.1,SO:0001217,UniParc:UPI0000000F4F,UniRef:UniRef100_Q99390,UniRef:UniRef50_Q99390,UniRef:UniRef90_Q99390
contig_2	Pyrodigal	gene	44025	44585	.	+	.	ID=GCA000010485_04685_gene;locus_tag=GCA000010485_04685;gene=finO
contig_2	Pyrodigal	CDS	44025	44585	.	+	0	ID=GCA000010485_04685;Name=Fertility inhibition protein;locus_tag=GCA000010485_04685;product=Fertility inhibition protein;Dbxref=GO:0003723;gene=finO;Parent=GCA000010485_04685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03607,RefSeq:WP_000139321.1,SO:0001217,UniParc:UPI0000000F50,UniRef:UniRef100_P08315,UniRef:UniRef50_P22707,UniRef:UniRef90_P08315
contig_2	Infernal	gene	44823	45006	.	-	.	ID=GCA000010485_04686_gene;locus_tag=GCA000010485_04686;gene=AS-pc02
contig_2	Infernal	ncRNA	44823	45006	6.9e-39	-	.	ID=GCA000010485_04686;Name=Antisense to pHK01_099;locus_tag=GCA000010485_04686;product=Antisense to pHK01_099;Dbxref=RFAM:RF02876;Parent=GCA000010485_04686_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02876
contig_2	Pyrodigal	gene	45171	45632	.	+	.	ID=GCA000010485_04687_gene;locus_tag=GCA000010485_04687
contig_2	Pyrodigal	CDS	45171	45632	.	+	0	ID=GCA000010485_04687;Name=putative endonuclease;locus_tag=GCA000010485_04687;product=putative endonuclease;Dbxref=GO:0003676,GO:0004519;Parent=GCA000010485_04687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001233838.1,SO:0001217,UniParc:UPI00002265B7,UniRef:UniRef100_B8XWT7,UniRef:UniRef50_Q99342,UniRef:UniRef90_Q99342;ec_number=3.1.-.-
contig_2	Pyrodigal	gene	45678	45887	.	+	.	ID=GCA000010485_04688_gene;locus_tag=GCA000010485_04688
contig_2	Pyrodigal	CDS	45678	45887	.	+	0	ID=GCA000010485_04688;Name=HhA;locus_tag=GCA000010485_04688;product=HhA;Parent=GCA000010485_04688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05839,RefSeq:WP_001298565.1,SO:0001217,UniParc:UPI0000043B46,UniRef:UniRef100_D9Z5A8,UniRef:UniRef50_D9Z5A8,UniRef:UniRef90_D9Z5A8
contig_2	Pyrodigal	gene	45925	46515	.	+	.	ID=GCA000010485_04689_gene;locus_tag=GCA000010485_04689
contig_2	Pyrodigal	CDS	45925	46515	.	+	0	ID=GCA000010485_04689;Name=DUF2726 domain-containing protein;locus_tag=GCA000010485_04689;product=DUF2726 domain-containing protein;Parent=GCA000010485_04689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000766808.1,SO:0001217,UniParc:UPI0000043B45,UniRef:UniRef100_C8CGG5,UniRef:UniRef50_Q326W0,UniRef:UniRef90_Q08JD4
contig_2	Pyrodigal	gene	46723	47469	.	-	.	ID=GCA000010485_04690_gene;locus_tag=GCA000010485_04690;gene=istB
contig_2	Pyrodigal	CDS	46723	47469	.	-	0	ID=GCA000010485_04690;Name=IS21-like element ISEc12 family helper ATPase IstB;locus_tag=GCA000010485_04690;product=IS21-like element ISEc12 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_04690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001514323,RefSeq:WP_001016257.1,SO:0001217,UniParc:UPI000250D98B,UniRef:UniRef100_Q93SD5,UniRef:UniRef50_V5EMU4,UniRef:UniRef90_Q93SD5
contig_2	Pyrodigal	gene	47484	49025	.	-	.	ID=GCA000010485_04691_gene;locus_tag=GCA000010485_04691;gene=tnp
contig_2	Pyrodigal	CDS	47484	49025	.	-	0	ID=GCA000010485_04691;Name=IS21 family ISEc12 transposase;locus_tag=GCA000010485_04691;product=IS21 family ISEc12 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc12,RefSeq:WP_001298859.1,SO:0001217,UniParc:UPI0000553298,UniRef:UniRef100_Q4FBH0,UniRef:UniRef50_A0AA51SAB9,UniRef:UniRef90_Q4FBH0
contig_2	Pyrodigal	gene	49269	50882	.	-	.	ID=GCA000010485_04692_gene;locus_tag=GCA000010485_04692;gene=tnp
contig_2	Pyrodigal	CDS	49269	50882	.	-	0	ID=GCA000010485_04692;Name=IS66 family ISEc23 transposase;locus_tag=GCA000010485_04692;product=IS66 family ISEc23 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc23,RefSeq:WP_000080195.1,SO:0001217,UniParc:UPI0000673CE1,UniRef:UniRef100_D9Z546,UniRef:UniRef50_B7LBX6,UniRef:UniRef90_Q6SJ34
contig_2	Pyrodigal	gene	50913	51263	.	-	.	ID=GCA000010485_04693_gene;locus_tag=GCA000010485_04693;gene=tnpB
contig_2	Pyrodigal	CDS	50913	51263	.	-	0	ID=GCA000010485_04693;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_04693;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_04693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000624722.1,SO:0001217,UniParc:UPI00002265B1,UniRef:UniRef100_B7LB70,UniRef:UniRef50_B7MRH6,UniRef:UniRef90_A0A8B3KFU8
contig_2	Pyrodigal	gene	51260	51685	.	-	.	ID=GCA000010485_04694_gene;locus_tag=GCA000010485_04694;gene=tnpA
contig_2	Pyrodigal	CDS	51260	51685	.	-	0	ID=GCA000010485_04694;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_04694;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_04694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422741.1,SO:0001217,UniParc:UPI00002265B0,UniRef:UniRef100_Q6SJ36,UniRef:UniRef50_Q6SJ36,UniRef:UniRef90_Q6SJ36
contig_2	Pyrodigal	gene	51881	52141	.	+	.	ID=GCA000010485_04695_gene;locus_tag=GCA000010485_04695;gene=copB
contig_2	Pyrodigal	CDS	51881	52141	.	+	0	ID=GCA000010485_04695;Name=Protein CopB;locus_tag=GCA000010485_04695;product=Protein CopB;gene=copB;Parent=GCA000010485_04695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000078109.1,SO:0001217,UniParc:UPI0000D50F59,UniRef:UniRef100_C8CGG6,UniRef:UniRef50_C8CGG6,UniRef:UniRef90_C8CGG6
contig_2	Infernal	gene	52268	52356	.	-	.	ID=GCA000010485_04696_gene;locus_tag=GCA000010485_04696;gene=copA
contig_2	Infernal	ncRNA	52268	52356	1.6e-16	-	.	ID=GCA000010485_04696;Name=CopA-like RNA;locus_tag=GCA000010485_04696;gene=copA;product=CopA-like RNA;Dbxref=RFAM:RF00042;Parent=GCA000010485_04696_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00042
contig_2	Bakta	gene	52374	52448	.	+	.	ID=GCA000010485_04697_gene;locus_tag=GCA000010485_04697;inference=ab initio prediction:Bakta;gene=repL
contig_2	Bakta	CDS	52374	52448	.	+	0	ID=GCA000010485_04697;Name=Positive regulator of RepFIC repA1 expression;locus_tag=GCA000010485_04697;product=Positive regulator of RepFIC repA1 expression;Dbxref=GO:0006260;gene=repL;Parent=GCA000010485_04697_gene;Note=RefSeq:WP_001365705.1,SO:0001217,UniParc:UPI00000009F3,UniRef:UniRef100_P62550,UniRef:UniRef50_P62550,UniRef:UniRef90_P62550
contig_2	Pyrodigal	gene	52441	53298	.	+	.	ID=GCA000010485_04698_gene;locus_tag=GCA000010485_04698;gene=repA
contig_2	Pyrodigal	CDS	52441	53298	.	+	0	ID=GCA000010485_04698;Name=incFII family plasmid replication initiator RepA;locus_tag=GCA000010485_04698;product=incFII family plasmid replication initiator RepA;Dbxref=GO:0006276;gene=repA;Parent=GCA000010485_04698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000131004.1,SO:0001217,UniParc:UPI0000D50F5A,UniRef:UniRef100_A0A192EZX0,UniRef:UniRef50_P03066,UniRef:UniRef90_Q2VP19
contig_2	BLAST+	rep_origin	53299	53660	.	?	.	ID=EFPPCJGBKI_4834;Name=origin of replication;Note=origin of replication
contig_2	Pyrodigal	gene	54354	55058	.	+	.	ID=GCA000010485_04699_gene;locus_tag=GCA000010485_04699;gene=tnp
contig_2	Pyrodigal	CDS	54354	55058	.	+	0	ID=GCA000010485_04699;Name=IS6 family IS15DIV transposase;locus_tag=GCA000010485_04699;product=IS6 family IS15DIV transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS15DIV,RefSeq:WP_001067837.1,SO:0001217,UniParc:UPI000176C30D,UniRef:UniRef100_C8CGG8,UniRef:UniRef50_A0A3G8EV07,UniRef:UniRef90_A0A0J3XVZ3
contig_2	Pyrodigal	gene	55157	55315	.	+	.	ID=GCA000010485_04700_gene;locus_tag=GCA000010485_04700
contig_2	Pyrodigal	CDS	55157	55315	.	+	0	ID=GCA000010485_04700;Name=Thioredoxin domain-containing protein;locus_tag=GCA000010485_04700;product=Thioredoxin domain-containing protein;Parent=GCA000010485_04700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449408.1,SO:0001217,UniParc:UPI00005EFB7E,UniRef:UniRef100_A0A0J3UW48,UniRef:UniRef50_A0A379S8L7,UniRef:UniRef90_A8AI73
contig_2	Pyrodigal	gene	55305	55811	.	+	.	ID=GCA000010485_04701_gene;locus_tag=GCA000010485_04701
contig_2	Pyrodigal	CDS	55305	55811	.	+	0	ID=GCA000010485_04701;Name=Alkyl hydroperoxide reductase;locus_tag=GCA000010485_04701;product=Alkyl hydroperoxide reductase;Parent=GCA000010485_04701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000949451.1,SO:0001217,UniParc:UPI0000043AE7,UniRef:UniRef100_C8CGH0,UniRef:UniRef50_A0A085GBW5,UniRef:UniRef90_A0A061Y5K1
contig_2	Pyrodigal	gene	56048	56809	.	+	.	ID=GCA000010485_04702_gene;locus_tag=GCA000010485_04702
contig_2	Pyrodigal	CDS	56048	56809	.	+	0	ID=GCA000010485_04702;Name=Na(+)-translocating NADH-quinone reductase subunit C;locus_tag=GCA000010485_04702;product=Na(+)-translocating NADH-quinone reductase subunit C;Parent=GCA000010485_04702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001225378.1,SO:0001217,UniParc:UPI0000043AE6,UniRef:UniRef100_B1VCI0,UniRef:UniRef50_A0A443VGG3,UniRef:UniRef90_B1VCI0
contig_2	Pyrodigal	gene	57102	59042	.	+	.	ID=GCA000010485_04703_gene;locus_tag=GCA000010485_04703
contig_2	Pyrodigal	CDS	57102	59042	.	+	0	ID=GCA000010485_04703;Name=FTR1 family iron permease;locus_tag=GCA000010485_04703;product=FTR1 family iron permease;Parent=GCA000010485_04703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07243,RefSeq:WP_001243579.1,SO:0001217,UniParc:UPI000176C30A,UniRef:UniRef100_C8CGH2,UniRef:UniRef50_A0A0W8JF71,UniRef:UniRef90_A0A8H9NS06
contig_2	Pyrodigal	gene	59083	59610	.	+	.	ID=GCA000010485_04704_gene;locus_tag=GCA000010485_04704;gene=tpd
contig_2	Pyrodigal	CDS	59083	59610	.	+	0	ID=GCA000010485_04704;Name=Iron transporter;locus_tag=GCA000010485_04704;product=Iron transporter;gene=tpd;Parent=GCA000010485_04704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3470,COG:MI,KEGG:K07230,RefSeq:WP_000178050.1,SO:0001217,UniParc:UPI0000043AE4,UniRef:UniRef100_C7S9U8,UniRef:UniRef50_Q9CNH9,UniRef:UniRef90_A8AI68
contig_2	Pyrodigal	gene	59714	61093	.	+	.	ID=GCA000010485_04705_gene;locus_tag=GCA000010485_04705
contig_2	Pyrodigal	CDS	59714	61093	.	+	0	ID=GCA000010485_04705;Name=DUF2318 domain-containing protein;locus_tag=GCA000010485_04705;product=DUF2318 domain-containing protein;Parent=GCA000010485_04705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000119836.1,SO:0001217,UniParc:UPI0000043AE3,UniRef:UniRef100_B1VCI3,UniRef:UniRef50_W0I1A3,UniRef:UniRef90_A0A7U9IU00
contig_2	Pyrodigal	gene	61096	62379	.	+	.	ID=GCA000010485_04706_gene;locus_tag=GCA000010485_04706
contig_2	Pyrodigal	CDS	61096	62379	.	+	0	ID=GCA000010485_04706;Name=ABC transport permease;locus_tag=GCA000010485_04706;product=ABC transport permease;Parent=GCA000010485_04706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000964653.1,SO:0001217,UniParc:UPI0000043AE2,UniRef:UniRef100_B1VCI4,UniRef:UniRef50_B1VCI4,UniRef:UniRef90_B1VCI4
contig_2	Pyrodigal	gene	62369	63499	.	+	.	ID=GCA000010485_04707_gene;locus_tag=GCA000010485_04707
contig_2	Pyrodigal	CDS	62369	63499	.	+	0	ID=GCA000010485_04707;Name=ABC transporter permease;locus_tag=GCA000010485_04707;product=ABC transporter permease;Parent=GCA000010485_04707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000729218.1,SO:0001217,UniParc:UPI0000043AE1,UniRef:UniRef100_C8CGH6,UniRef:UniRef50_A0A0J3UWD0,UniRef:UniRef90_A0A0J3UWD0
contig_2	Pyrodigal	gene	63504	64199	.	+	.	ID=GCA000010485_04708_gene;locus_tag=GCA000010485_04708
contig_2	Pyrodigal	CDS	63504	64199	.	+	0	ID=GCA000010485_04708;Name=ABC transporter ATP-binding protein;locus_tag=GCA000010485_04708;product=ABC transporter ATP-binding protein;Parent=GCA000010485_04708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000117262.1,SO:0001217,UniParc:UPI0000043AE0,UniRef:UniRef100_B1VCI6,UniRef:UniRef50_B1VCI6,UniRef:UniRef90_B1VCI6
contig_2	Pyrodigal	gene	64186	64671	.	+	.	ID=GCA000010485_04709_gene;locus_tag=GCA000010485_04709
contig_2	Pyrodigal	CDS	64186	64671	.	+	0	ID=GCA000010485_04709;Name=Thioredoxin domain-containing protein;locus_tag=GCA000010485_04709;product=Thioredoxin domain-containing protein;Parent=GCA000010485_04709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001267176.1,SO:0001217,UniParc:UPI0000043ADF,UniRef:UniRef100_B7LIY6,UniRef:UniRef50_A0A4R1NR14,UniRef:UniRef90_A8AI63
contig_2	Pyrodigal	gene	64696	65181	.	+	.	ID=GCA000010485_04710_gene;locus_tag=GCA000010485_04710
contig_2	Pyrodigal	CDS	64696	65181	.	+	0	ID=GCA000010485_04710;Name=Sigma-70%2C region 4;locus_tag=GCA000010485_04710;product=Sigma-70%2C region 4;Parent=GCA000010485_04710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000874189.1,SO:0001217,UniParc:UPI0000043ADE,UniRef:UniRef100_B1VCI8,UniRef:UniRef50_A0A0F6TUB3,UniRef:UniRef90_A0A6L9ACC5
contig_2	Pyrodigal	gene	65303	65752	.	+	.	ID=GCA000010485_04711_gene;locus_tag=GCA000010485_04711
contig_2	Pyrodigal	CDS	65303	65752	.	+	0	ID=GCA000010485_04711;Name=Glucose-1-phosphatase;locus_tag=GCA000010485_04711;product=Glucose-1-phosphatase;Parent=GCA000010485_04711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EFDE0,UniRef:UniRef100_C8CGI0,UniRef:UniRef50_A0A379S6A3,UniRef:UniRef90_A0A2X2VFH6
contig_2	Pyrodigal	gene	65727	66047	.	+	.	ID=GCA000010485_04712_gene;locus_tag=GCA000010485_04712
contig_2	Pyrodigal	CDS	65727	66047	.	+	0	ID=GCA000010485_04712;Name=Glucose-1-phosphatase;locus_tag=GCA000010485_04712;product=Glucose-1-phosphatase;Parent=GCA000010485_04712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B28D0B,UniRef:UniRef100_C8CGI1,UniRef:UniRef50_A0A0J3XW08,UniRef:UniRef90_A0A0J3XW08
contig_2	Pyrodigal	gene	66086	66589	.	-	.	ID=GCA000010485_04713_gene;locus_tag=GCA000010485_04713
contig_2	Pyrodigal	CDS	66086	66589	.	-	0	ID=GCA000010485_04713;Name=Transposase;locus_tag=GCA000010485_04713;product=Transposase;Parent=GCA000010485_04713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001887960,UniRef:UniRef100_A0A0C5EQK9,UniRef:UniRef50_A0A0C5EQK9,UniRef:UniRef90_A0A0C5EQK9
contig_2	Pyrodigal	gene	67181	67660	.	-	.	ID=GCA000010485_04714_gene;locus_tag=GCA000010485_04714
contig_2	Pyrodigal	CDS	67181	67660	.	-	0	ID=GCA000010485_04714;Name=HTH-like domain-containing protein;locus_tag=GCA000010485_04714;product=HTH-like domain-containing protein;Parent=GCA000010485_04714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001130166.1,SO:0001217,UniParc:UPI0001B28D0C,UniRef:UniRef100_C8CGI3,UniRef:UniRef50_A0A288XGP4,UniRef:UniRef90_A0A0E2KWW9
contig_2	Infernal	regulatory_region	67589	67705	8e-22	-	.	ID=EFPPCJGBKI_330;Name=ALIL pseudoknot;product=ALIL pseudoknot;Dbxref=RFAM:RF01497;inference=profile:Rfam:RF01497;Note=SO:0005836;regulatory_class=other
contig_2	Pyrodigal	gene	67660	67986	.	-	.	ID=GCA000010485_04715_gene;locus_tag=GCA000010485_04715;gene=tnp
contig_2	Pyrodigal	CDS	67660	67986	.	-	0	ID=GCA000010485_04715;Name=IS3 family IS1203 transposase ORF A;locus_tag=GCA000010485_04715;product=IS3 family IS1203 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000010485_04715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1203,RefSeq:WP_000165133.1,SO:0001217,UniParc:UPI00005E3CF2,UniRef:UniRef100_A0A232NTS4,UniRef:UniRef50_P16942,UniRef:UniRef90_P16942
contig_2	Pyrodigal	gene	68088	68348	.	+	.	ID=GCA000010485_04716_gene;locus_tag=GCA000010485_04716;gene=ydfA
contig_2	Pyrodigal	CDS	68088	68348	.	+	0	ID=GCA000010485_04716;Name=YdfA protein;locus_tag=GCA000010485_04716;product=YdfA protein;gene=ydfA;Parent=GCA000010485_04716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000371882.1,SO:0001217,UniParc:UPI00005AA94A,UniRef:UniRef100_C8CGI5,UniRef:UniRef50_A0A086TN86,UniRef:UniRef90_A0A376MGI2
contig_2	Pyrodigal	gene	68345	68854	.	+	.	ID=GCA000010485_04717_gene;locus_tag=GCA000010485_04717;gene=ydeA
contig_2	Pyrodigal	CDS	68345	68854	.	+	0	ID=GCA000010485_04717;Name=YdeA protein;locus_tag=GCA000010485_04717;product=YdeA protein;gene=ydeA;Parent=GCA000010485_04717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000194542.1,SO:0001217,UniParc:UPI00005EFD2F,UniRef:UniRef100_C8CGI6,UniRef:UniRef50_A0A0A0GLC8,UniRef:UniRef90_A0A193QDG0
contig_2	Pyrodigal	gene	68874	69221	.	-	.	ID=GCA000010485_04718_gene;locus_tag=GCA000010485_04718
contig_2	Pyrodigal	CDS	68874	69221	.	-	0	ID=GCA000010485_04718;Name=DUF6404 domain-containing protein;locus_tag=GCA000010485_04718;product=DUF6404 domain-containing protein;Parent=GCA000010485_04718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142452.1,SO:0001217,UniParc:UPI00005AA94C,UniRef:UniRef100_C8CGI7,UniRef:UniRef50_A0A724AA46,UniRef:UniRef90_C8CGI7
contig_2	Pyrodigal	gene	69350	69685	.	+	.	ID=GCA000010485_04719_gene;locus_tag=GCA000010485_04719
contig_2	Pyrodigal	CDS	69350	69685	.	+	0	ID=GCA000010485_04719;Name=Colicin-Ia immunity protein;locus_tag=GCA000010485_04719;product=Colicin-Ia immunity protein;Dbxref=GO:0005886,GO:0015643,GO:0030153;Parent=GCA000010485_04719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080732.1,SO:0001217,UniParc:UPI0000D50F62,UniRef:UniRef100_C8CGI8,UniRef:UniRef50_P08701,UniRef:UniRef90_P08701
contig_2	Pyrodigal	gene	71257	71823	.	+	.	ID=GCA000010485_04720_gene;locus_tag=GCA000010485_04720
contig_2	Pyrodigal	CDS	71257	71823	.	+	0	ID=GCA000010485_04720;Name=Primase C-terminal 1 domain-containing protein;locus_tag=GCA000010485_04720;product=Primase C-terminal 1 domain-containing protein;Parent=GCA000010485_04720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005AA94E,UniRef:UniRef100_A0A0G9FYB1,UniRef:UniRef50_S1QDK8,UniRef:UniRef90_S1QDK8
contig_2	Pyrodigal	gene	71782	71919	.	-	.	ID=GCA000010485_04721_gene;locus_tag=GCA000010485_04721
contig_2	Pyrodigal	CDS	71782	71919	.	-	0	ID=GCA000010485_04721;Name=hypothetical protein;locus_tag=GCA000010485_04721;product=hypothetical protein;Parent=GCA000010485_04721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000245E845,UniRef:UniRef100_A0A2Z5WRB2,UniRef:UniRef50_A0A2Z5WRB2,UniRef:UniRef90_A0A2Z5WRB2
contig_2	Pyrodigal	gene	72155	73030	.	+	.	ID=GCA000010485_04722_gene;locus_tag=GCA000010485_04722;gene=chaN
contig_2	Pyrodigal	CDS	72155	73030	.	+	0	ID=GCA000010485_04722;Name=Haem-binding uptake Tiki superfamily ChaN domain-containing protein;locus_tag=GCA000010485_04722;product=Haem-binding uptake Tiki superfamily ChaN domain-containing protein;gene=chaN;Parent=GCA000010485_04722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224623.1,SO:0001217,UniParc:UPI0000D50F63,UniRef:UniRef100_C8CGJ0,UniRef:UniRef50_A0A0V9GB71,UniRef:UniRef90_A0A0V9GB71
contig_2	Pyrodigal	gene	73038	73814	.	+	.	ID=GCA000010485_04723_gene;locus_tag=GCA000010485_04723;gene=tonB
contig_2	Pyrodigal	CDS	73038	73814	.	+	0	ID=GCA000010485_04723;Name=TonB C-terminal domain-containing protein;locus_tag=GCA000010485_04723;product=TonB C-terminal domain-containing protein;gene=tonB;Parent=GCA000010485_04723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03832,RefSeq:WP_000981091.1,SO:0001217,UniParc:UPI0000D50F64,UniRef:UniRef100_C8CGJ1,UniRef:UniRef50_A0AAE9TN89,UniRef:UniRef90_A0AAE9TN89
contig_2	Pyrodigal	gene	73983	76244	.	+	.	ID=GCA000010485_04724_gene;locus_tag=GCA000010485_04724
contig_2	Pyrodigal	CDS	73983	76244	.	+	0	ID=GCA000010485_04724;Name=TonB-dependent receptor;locus_tag=GCA000010485_04724;product=TonB-dependent receptor;Parent=GCA000010485_04724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_001100763.1,SO:0001217,UniParc:UPI0000043AEA,UniRef:UniRef100_C8CGJ2,UniRef:UniRef50_A0A656B0B9,UniRef:UniRef90_A8ACK7
contig_2	Pyrodigal	gene	76313	77488	.	+	.	ID=GCA000010485_04725_gene;locus_tag=GCA000010485_04725;gene=senB
contig_2	Pyrodigal	CDS	76313	77488	.	+	0	ID=GCA000010485_04725;Name=enterotoxin production-related protein TieB;locus_tag=GCA000010485_04725;product=enterotoxin production-related protein TieB;gene=senB;Parent=GCA000010485_04725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001020413,COG:COG3391,COG:R,NCBIProtein:AAZ89288.1,RefSeq:WP_001020413.1,SO:0001217,UniParc:UPI00005AA952,UniRef:UniRef100_A0A0G9G3A2,UniRef:UniRef50_A0A3S4J4F6,UniRef:UniRef90_A0A0G9G3A2
contig_2	Pyrodigal	gene	78011	78277	.	-	.	ID=GCA000010485_04726_gene;locus_tag=GCA000010485_04726
contig_2	Pyrodigal	CDS	78011	78277	.	-	0	ID=GCA000010485_04726;Name=Transposase;locus_tag=GCA000010485_04726;product=Transposase;Parent=GCA000010485_04726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EFD2C,UniRef:UniRef100_C8CGJ4,UniRef:UniRef50_A0A6G9HLK4,UniRef:UniRef90_C8CGJ4
contig_2	Pyrodigal	gene	78342	78668	.	+	.	ID=GCA000010485_04727_gene;locus_tag=GCA000010485_04727;gene=tnp
contig_2	Pyrodigal	CDS	78342	78668	.	+	0	ID=GCA000010485_04727;Name=IS3 family IS629 transposase ORF A;locus_tag=GCA000010485_04727;product=IS3 family IS629 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000010485_04727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS629,RefSeq:WP_000165261.1,SO:0001217,UniParc:UPI000000E185,UniRef:UniRef100_C8CGJ5,UniRef:UniRef50_P16942,UniRef:UniRef90_P16942
contig_2	Infernal	regulatory_region	78623	78739	8e-22	+	.	ID=EFPPCJGBKI_331;Name=ALIL pseudoknot;product=ALIL pseudoknot;Dbxref=RFAM:RF01497;inference=profile:Rfam:RF01497;Note=SO:0005836;regulatory_class=other
contig_2	Pyrodigal	gene	78810	79565	.	-	.	ID=GCA000010485_04728_gene;locus_tag=GCA000010485_04728;gene=istB
contig_2	Pyrodigal	CDS	78810	79565	.	-	0	ID=GCA000010485_04728;Name=IS21-like element ISEc10 family helper ATPase IstB;locus_tag=GCA000010485_04728;product=IS21-like element ISEc10 family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_04728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001522280,RefSeq:WP_000065240.1,SO:0001217,UniParc:UPI00000E54ED,UniRef:UniRef100_C8CGJ6,UniRef:UniRef50_A0A7D6DGV8,UniRef:UniRef90_A0A5X8Y4U5
contig_2	Pyrodigal	gene	79562	81061	.	-	.	ID=GCA000010485_04729_gene;locus_tag=GCA000010485_04729;gene=tnp
contig_2	Pyrodigal	CDS	79562	81061	.	-	0	ID=GCA000010485_04729;Name=IS21 family ISEc10 transposase;locus_tag=GCA000010485_04729;product=IS21 family ISEc10 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc10,RefSeq:WP_000143800.1,SO:0001217,UniParc:UPI0000D50F65,UniRef:UniRef100_C8CGJ7,UniRef:UniRef50_A0A763GU38,UniRef:UniRef90_A0A0F7G1B4
contig_2	Pyrodigal	gene	82614	84137	.	+	.	ID=GCA000010485_04730_gene;locus_tag=GCA000010485_04730;gene=ltrA
contig_2	Pyrodigal	CDS	82614	84137	.	+	0	ID=GCA000010485_04730;Name=group II intron reverse transcriptase/maturase;locus_tag=GCA000010485_04730;product=group II intron reverse transcriptase/maturase;Dbxref=GO:0000373,GO:0003964;gene=ltrA;Parent=GCA000010485_04730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3344,COG:X,KEGG:K00986,RefSeq:WP_000587108.1,SO:0001217,UniParc:UPI000176B250,UniRef:UniRef100_C8CGJ9,UniRef:UniRef50_A0A0J2BNC6,UniRef:UniRef90_A0A0J2BNC6;ec_number=2.7.7.49
contig_2	Pyrodigal	gene	84254	84610	.	+	.	ID=GCA000010485_04731_gene;locus_tag=GCA000010485_04731
contig_2	Pyrodigal	CDS	84254	84610	.	+	0	ID=GCA000010485_04731;Name=Inactivated IS629 orf2 transposase derivative;locus_tag=GCA000010485_04731;product=Inactivated IS629 orf2 transposase derivative;Parent=GCA000010485_04731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EFD28,UniRef:UniRef100_A0A2Z5WRA2,UniRef:UniRef50_Q6GZJ8,UniRef:UniRef90_A0A2Z5WRA2
contig_2	Pyrodigal	gene	84639	85043	.	+	.	ID=GCA000010485_04732_gene;locus_tag=GCA000010485_04732;gene=tnpA
contig_2	Pyrodigal	CDS	84639	85043	.	+	0	ID=GCA000010485_04732;Name=IS66-like element accessory protein TnpA;locus_tag=GCA000010485_04732;product=IS66-like element accessory protein TnpA;gene=tnpA;Parent=GCA000010485_04732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2963,COG:X,RefSeq:WP_000839179.1,SO:0001217,UniParc:UPI00000DEFEC,UniRef:UniRef100_C8CGK1,UniRef:UniRef50_A0A2N5AMY0,UniRef:UniRef90_A0A2N5AMY0
contig_2	Pyrodigal	gene	85040	85387	.	+	.	ID=GCA000010485_04733_gene;locus_tag=GCA000010485_04733;gene=tnpB
contig_2	Pyrodigal	CDS	85040	85387	.	+	0	ID=GCA000010485_04733;Name=IS66 family insertion sequence element accessory protein TnpB;locus_tag=GCA000010485_04733;product=IS66 family insertion sequence element accessory protein TnpB;gene=tnpB;Parent=GCA000010485_04733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3436,COG:X,RefSeq:WP_000612626.1,SO:0001217,UniParc:UPI00000DEFED,UniRef:UniRef100_C8CGK2,UniRef:UniRef50_C8CGK2,UniRef:UniRef90_C8CGK2
contig_2	Pyrodigal	gene	85436	86443	.	+	.	ID=GCA000010485_04734_gene;locus_tag=GCA000010485_04734;gene=tnpC
contig_2	Pyrodigal	CDS	85436	86443	.	+	0	ID=GCA000010485_04734;Name=IS66 family transposase;locus_tag=GCA000010485_04734;product=IS66 family transposase;Dbxref=GO:0004803;gene=tnpC;Parent=GCA000010485_04734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A809SYS5,UniRef:UniRef90_A0A809SYS5
contig_2	Pyrodigal	gene	86457	87479	.	+	.	ID=GCA000010485_04735_gene;locus_tag=GCA000010485_04735;gene=tnp
contig_2	Pyrodigal	CDS	86457	87479	.	+	0	ID=GCA000010485_04735;Name=IS21 family IS100 transposase;locus_tag=GCA000010485_04735;product=IS21 family IS100 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4584,COG:X,IS:IS100,RefSeq:WP_001310017.1,SO:0001217,UniParc:UPI0000D50F67,UniRef:UniRef100_A0A0C5EQI6,UniRef:UniRef50_Q93K87,UniRef:UniRef90_Q93K87
contig_2	Pyrodigal	gene	87479	88258	.	+	.	ID=GCA000010485_04736_gene;locus_tag=GCA000010485_04736;gene=istB
contig_2	Pyrodigal	CDS	87479	88258	.	+	0	ID=GCA000010485_04736;Name=IS21-like element IS100kyp family helper ATPase IstB;locus_tag=GCA000010485_04736;product=IS21-like element IS100kyp family helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000010485_04736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001667685,RefSeq:WP_001323403.1,SO:0001217,UniParc:UPI00005F2A67,UniRef:UniRef100_Q5I3K7,UniRef:UniRef50_A0A085A802,UniRef:UniRef90_Q5I3K7
contig_2	Pyrodigal	gene	88503	88934	.	+	.	ID=GCA000010485_04737_gene;locus_tag=GCA000010485_04737;gene=tnpC
contig_2	Pyrodigal	CDS	88503	88934	.	+	0	ID=GCA000010485_04737;Name=IS66 family transposase;locus_tag=GCA000010485_04737;product=IS66 family transposase;Dbxref=GO:0004803;gene=tnpC;Parent=GCA000010485_04737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000123375.1,SO:0001217,UniParc:UPI0001E35A9E,UniRef:UniRef100_A0A2X7TQS2,UniRef:UniRef50_A0A770ATC5,UniRef:UniRef90_A0A770ATC5
contig_2	Pyrodigal	gene	88997	89788	.	-	.	ID=GCA000010485_04738_gene;locus_tag=GCA000010485_04738
contig_2	Pyrodigal	CDS	88997	89788	.	-	0	ID=GCA000010485_04738;Name=ABC transporter;locus_tag=GCA000010485_04738;product=ABC transporter;Parent=GCA000010485_04738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977394.1,SO:0001217,UniParc:UPI000176B427,UniRef:UniRef100_C8CGK7,UniRef:UniRef50_C8CGK7,UniRef:UniRef90_C8CGK7
contig_2	Pyrodigal	gene	89795	91765	.	-	.	ID=GCA000010485_04739_gene;locus_tag=GCA000010485_04739
contig_2	Pyrodigal	CDS	89795	91765	.	-	0	ID=GCA000010485_04739;Name=Heme/hemopexin utilization protein C;locus_tag=GCA000010485_04739;product=Heme/hemopexin utilization protein C;Parent=GCA000010485_04739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_001298664.1,SO:0001217,UniParc:UPI0000D50F69,UniRef:UniRef100_A0A061Y4M1,UniRef:UniRef50_A0A0E3V262,UniRef:UniRef90_A0A0E3V262
contig_2	Pyrodigal	gene	92047	92412	.	+	.	ID=GCA000010485_04740_gene;locus_tag=GCA000010485_04740;gene=tnp
contig_2	Pyrodigal	CDS	92047	92412	.	+	0	ID=GCA000010485_04740;Name=IS3 family IS2 transposase ORF A;locus_tag=GCA000010485_04740;product=IS3 family IS2 transposase ORF A;gene=tnp;Parent=GCA000010485_04740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS2,RefSeq:WP_001620534.1,SO:0001217,UniParc:UPI0002A3F3A9,UniRef:UniRef100_UPI0002A3F3A9,UniRef:UniRef50_A0A564MH00,UniRef:UniRef90_A0A2P9ELD4
contig_2	Pyrodigal	gene	93798	93911	.	-	.	ID=GCA000010485_04741_gene;locus_tag=GCA000010485_04741
contig_2	Pyrodigal	CDS	93798	93911	.	-	0	ID=GCA000010485_04741;Name=Transposase;locus_tag=GCA000010485_04741;product=Transposase;Parent=GCA000010485_04741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000176B3EA,UniRef:UniRef100_A0A0G3B447,UniRef:UniRef50_A0A376ZRZ3,UniRef:UniRef90_A0A376ZRZ3
contig_2	Pyrodigal	gene	94127	95296	.	-	.	ID=GCA000010485_04742_gene;locus_tag=GCA000010485_04742
contig_2	Pyrodigal	CDS	94127	95296	.	-	0	ID=GCA000010485_04742;Name=Inner membrane protein;locus_tag=GCA000010485_04742;product=Inner membrane protein;Parent=GCA000010485_04742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001072358.1,SO:0001217,UniParc:UPI0001887AA3,UniRef:UniRef100_C8CGL0,UniRef:UniRef50_A0A0H3CW54,UniRef:UniRef90_W1WT74
contig_2	Pyrodigal	gene	95972	96712	.	+	.	ID=GCA000010485_04743_gene;locus_tag=GCA000010485_04743;gene=intM
contig_2	Pyrodigal	CDS	95972	96712	.	+	0	ID=GCA000010485_04743;Name=putative site-specific recombinase;locus_tag=GCA000010485_04743;product=putative site-specific recombinase;Dbxref=GO:0003677,GO:0006310,GO:0015074;gene=intM;Parent=GCA000010485_04743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001066947.1,SO:0001217,UniParc:UPI0000D50F6D,UniRef:UniRef100_C8CGL1,UniRef:UniRef50_P56979,UniRef:UniRef90_P56979
contig_2	Pyrodigal	gene	96955	97932	.	-	.	ID=GCA000010485_04744_gene;locus_tag=GCA000010485_04744;gene=repB
contig_2	Pyrodigal	CDS	96955	97932	.	-	0	ID=GCA000010485_04744;Name=RepFIB replication protein A;locus_tag=GCA000010485_04744;product=RepFIB replication protein A;Dbxref=GO:0003677,GO:0003887,GO:0006270,GO:0006276;gene=repB;Parent=GCA000010485_04744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001309253.1,SO:0001217,UniParc:UPI00005EFD49,UniRef:UniRef100_C8CGL2,UniRef:UniRef50_Q57154,UniRef:UniRef90_Q57154
contig_2	Pyrodigal	gene	98919	99239	.	+	.	ID=GCA000010485_04745_gene;locus_tag=GCA000010485_04745
contig_2	Pyrodigal	CDS	98919	99239	.	+	0	ID=GCA000010485_04745;Name=hypothetical protein;locus_tag=GCA000010485_04745;product=hypothetical protein;Parent=GCA000010485_04745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001363097.1,SO:0001217,UniParc:UPI00018879C6,UniRef:UniRef100_A0A7G3L3C3,UniRef:UniRef50_A0A376ZN91,UniRef:UniRef90_A0A376ZN91
contig_2	Pyrodigal	gene	99107	99748	.	-	.	ID=GCA000010485_04746_gene;locus_tag=GCA000010485_04746;gene=yuaU
contig_2	Pyrodigal	CDS	99107	99748	.	-	0	ID=GCA000010485_04746;Name=putative protein YuaU;locus_tag=GCA000010485_04746;product=putative protein YuaU;gene=yuaU;Parent=GCA000010485_04746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000990667.1,SO:0001217,UniParc:UPI00005EFD48,UniRef:UniRef100_Q1R1Y6,UniRef:UniRef50_Q1R1Y6,UniRef:UniRef90_Q1R1Y6
contig_2	Pyrodigal	gene	100711	100878	.	-	.	ID=GCA000010485_04747_gene;locus_tag=GCA000010485_04747
contig_2	Pyrodigal	CDS	100711	100878	.	-	0	ID=GCA000010485_04747;Name=hypothetical protein;locus_tag=GCA000010485_04747;product=hypothetical protein;Parent=GCA000010485_04747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000218294.1,SO:0001217,UniParc:UPI0000D50F71,UniRef:UniRef100_A0A0J3V1Q5,UniRef:UniRef50_A0A0J3V1Q5,UniRef:UniRef90_A0A0J3V1Q5
contig_2	Pyrodigal	gene	102070	102288	.	+	.	ID=GCA000010485_04748_gene;locus_tag=GCA000010485_04748;gene=ccdA
contig_2	Pyrodigal	CDS	102070	102288	.	+	0	ID=GCA000010485_04748;Name=type II toxin-antitoxin system antitoxin CcdA;locus_tag=GCA000010485_04748;product=type II toxin-antitoxin system antitoxin CcdA;Dbxref=GO:0003677,GO:0017053,GO:0032984,GO:0045892,GO:0097351,GO:0110001;gene=ccdA;Parent=GCA000010485_04748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000813634.1,SO:0001217,UniParc:UPI00001272A3,UniRef:UniRef100_P62552,UniRef:UniRef50_P62552,UniRef:UniRef90_P62552
contig_2	Pyrodigal	gene	102290	102595	.	+	.	ID=GCA000010485_04749_gene;locus_tag=GCA000010485_04749;gene=ccdB
contig_2	Pyrodigal	CDS	102290	102595	.	+	0	ID=GCA000010485_04749;Name=type II toxin-antitoxin system toxin CcdB;locus_tag=GCA000010485_04749;product=type II toxin-antitoxin system toxin CcdB;gene=ccdB;Parent=GCA000010485_04749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19163,RefSeq:WP_001159871.1,SO:0001217,UniParc:UPI0000599212,UniRef:UniRef100_Q0H052,UniRef:UniRef50_Q46996,UniRef:UniRef90_Q0H052
contig_2	Pyrodigal	gene	102596	103405	.	+	.	ID=GCA000010485_04750_gene;locus_tag=GCA000010485_04750
contig_2	Pyrodigal	CDS	102596	103405	.	+	0	ID=GCA000010485_04750;Name=Resolvase;locus_tag=GCA000010485_04750;product=Resolvase;Parent=GCA000010485_04750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000016979.1,SO:0001217,UniParc:UPI00000AF2CA,UniRef:UniRef100_Q08JL3,UniRef:UniRef50_Q1R1Y0,UniRef:UniRef90_Q1R1Y0
contig_2	Pyrodigal	gene	103543	103818	.	-	.	ID=GCA000010485_04751_gene;locus_tag=GCA000010485_04751;gene=copG
contig_2	Pyrodigal	CDS	103543	103818	.	-	0	ID=GCA000010485_04751;Name=CopG family transcriptional regulator;locus_tag=GCA000010485_04751;product=CopG family transcriptional regulator;gene=copG;Parent=GCA000010485_04751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000239529.1,SO:0001217,UniParc:UPI00000BC1AD,UniRef:UniRef100_T1NXB3,UniRef:UniRef50_A0A1I7EAB2,UniRef:UniRef90_A0A2L1KKS6
contig_2	Pyrodigal	gene	103812	104456	.	-	.	ID=GCA000010485_04752_gene;locus_tag=GCA000010485_04752
contig_2	Pyrodigal	CDS	103812	104456	.	-	0	ID=GCA000010485_04752;Name=AAA family ATPase;locus_tag=GCA000010485_04752;product=AAA family ATPase;Parent=GCA000010485_04752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000633911.1,SO:0001217,UniParc:UPI00000AE9D9,UniRef:UniRef100_Q0H055,UniRef:UniRef50_Q0H055,UniRef:UniRef90_Q0H055
contig_2	Pyrodigal	gene	104685	105656	.	+	.	ID=GCA000010485_04753_gene;locus_tag=GCA000010485_04753
contig_2	Pyrodigal	CDS	104685	105656	.	+	0	ID=GCA000010485_04753;Name=Plasmid stability protein;locus_tag=GCA000010485_04753;product=Plasmid stability protein;Parent=GCA000010485_04753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18640,RefSeq:WP_001103694.1,SO:0001217,UniParc:UPI0000043B53,UniRef:UniRef100_Q08JL0,UniRef:UniRef50_A0A2X1NVR8,UniRef:UniRef90_A0A2X1NVR8
contig_2	Pyrodigal	gene	105661	106053	.	+	.	ID=GCA000010485_04754_gene;locus_tag=GCA000010485_04754
contig_2	Pyrodigal	CDS	105661	106053	.	+	0	ID=GCA000010485_04754;Name=Plasmid partitioning/stability family protein;locus_tag=GCA000010485_04754;product=Plasmid partitioning/stability family protein;Parent=GCA000010485_04754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000340835.1,SO:0001217,UniParc:UPI0000D50F75,UniRef:UniRef100_C8CGM1,UniRef:UniRef50_Q5JBI8,UniRef:UniRef90_Q5JBI8
contig_2	Pyrodigal	gene	106058	106291	.	-	.	ID=GCA000010485_04755_gene;locus_tag=GCA000010485_04755;gene=umuC
contig_2	Pyrodigal	CDS	106058	106291	.	-	0	ID=GCA000010485_04755;Name=DNA polymerase V subunit UmuC;locus_tag=GCA000010485_04755;product=DNA polymerase V subunit UmuC;gene=umuC;Parent=GCA000010485_04755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03502,RefSeq:WP_000878855.1,SO:0001217,UniParc:UPI000260C034,UniRef:UniRef100_A0A385EP52,UniRef:UniRef50_P18642,UniRef:UniRef90_A0A385EP52
contig_2	Pyrodigal	gene	106336	107328	.	-	.	ID=GCA000010485_04756_gene;locus_tag=GCA000010485_04756;gene=impB
contig_2	Pyrodigal	CDS	106336	107328	.	-	0	ID=GCA000010485_04756;Name=DNA polymerase V protein ImpB;locus_tag=GCA000010485_04756;product=DNA polymerase V protein ImpB;gene=impB;Parent=GCA000010485_04756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001322634.1,SO:0001217,UniParc:UPI00005EFD47,UniRef:UniRef100_C8CGM2,UniRef:UniRef90_C8CGM2
contig_2	Pyrodigal	gene	107328	107765	.	-	.	ID=GCA000010485_04757_gene;locus_tag=GCA000010485_04757;gene=impA
contig_2	Pyrodigal	CDS	107328	107765	.	-	0	ID=GCA000010485_04757;Name=Protein ImpA;locus_tag=GCA000010485_04757;product=Protein ImpA;Dbxref=GO:0003677,GO:0006281,GO:0006355,GO:0006508,GO:0008236,GO:0009432;gene=impA;Parent=GCA000010485_04757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03503,RefSeq:WP_000109079.1,SO:0001217,UniParc:UPI00005EFD46,UniRef:UniRef100_C8CGM3,UniRef:UniRef50_Q7M1C0,UniRef:UniRef90_Q7M1C0;ec_number=3.4.21.-
contig_2	Pyrodigal	gene	107762	108010	.	-	.	ID=GCA000010485_04758_gene;locus_tag=GCA000010485_04758;gene=dinI
contig_2	Pyrodigal	CDS	107762	108010	.	-	0	ID=GCA000010485_04758;Name=DinI family protein;locus_tag=GCA000010485_04758;product=DinI family protein;gene=dinI;Parent=GCA000010485_04758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12149,RefSeq:WP_000619112.1,SO:0001217,UniParc:UPI00005EFD45,UniRef:UniRef100_Q08JK5,UniRef:UniRef50_A0A8E6P086,UniRef:UniRef90_A0A8E6P086
contig_2	Pyrodigal	gene	108145	108663	.	+	.	ID=GCA000010485_04759_gene;locus_tag=GCA000010485_04759;gene=dfsB
contig_2	Pyrodigal	CDS	108145	108663	.	+	0	ID=GCA000010485_04759;Name=ClbS/DfsB family four-helix bundle protein;locus_tag=GCA000010485_04759;product=ClbS/DfsB family four-helix bundle protein;gene=dfsB;Parent=GCA000010485_04759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4283,COG:R,RefSeq:WP_000115885.1,SO:0001217,UniParc:UPI00000BB1E5,UniRef:UniRef100_A0A376RIA6,UniRef:UniRef50_A0A0H3FAL4,UniRef:UniRef90_K8W940
contig_2	Pyrodigal	gene	108682	109902	.	+	.	ID=GCA000010485_04760_gene;locus_tag=GCA000010485_04760;gene=tnp
contig_2	Pyrodigal	CDS	108682	109902	.	+	0	ID=GCA000010485_04760;Name=ISL3 family ISEc53 transposase;locus_tag=GCA000010485_04760;product=ISL3 family ISEc53 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000010485_04760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISEc53,RefSeq:WP_000343766.1,SO:0001217,UniParc:UPI0000D50F76,UniRef:UniRef100_A0A7G3L4I5,UniRef:UniRef50_A0A7G3L4I5,UniRef:UniRef90_A0A7G3L4I5
contig_2	Pyrodigal	gene	110297	111151	.	+	.	ID=GCA000010485_04761_gene;locus_tag=GCA000010485_04761;gene=yubB
contig_2	Pyrodigal	CDS	110297	111151	.	+	0	ID=GCA000010485_04761;Name=YubB ferredoxin-like domain-containing protein;locus_tag=GCA000010485_04761;product=YubB ferredoxin-like domain-containing protein;gene=yubB;Parent=GCA000010485_04761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001134351.1,SO:0001217,UniParc:UPI0000D50F77,UniRef:UniRef100_C8CGM6,UniRef:UniRef50_C8CGM6,UniRef:UniRef90_C8CGM6
contig_2	Pyrodigal	gene	111145	111942	.	-	.	ID=GCA000010485_04762_gene;locus_tag=GCA000010485_04762;gene=istB
contig_2	Pyrodigal	CDS	111145	111942	.	-	0	ID=GCA000010485_04762;Name=IS21-like element IS21 family helper ATPase IstB;locus_tag=GCA000010485_04762;product=IS21-like element IS21 family helper ATPase IstB;Dbxref=GO:0005524,GO:0006260,GO:0016887;gene=istB;Parent=GCA000010485_04762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000544830,COG:COG1484,COG:L,RefSeq:WP_000544830.1,SO:0001217,UniParc:UPI000012D9E4,UniRef:UniRef100_P15026,UniRef:UniRef50_P15026,UniRef:UniRef90_P15026
contig_2	Pyrodigal	gene	111942	113114	.	-	.	ID=GCA000010485_04763_gene;locus_tag=GCA000010485_04763;gene=tnp
contig_2	Pyrodigal	CDS	111942	113114	.	-	0	ID=GCA000010485_04763;Name=IS21 family IS21 transposase;locus_tag=GCA000010485_04763;product=IS21 family IS21 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000010485_04763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS21,RefSeq:WP_000952372.1,SO:0001217,UniParc:UPI0000D50F78,UniRef:UniRef100_C8CGM8,UniRef:UniRef50_P15025,UniRef:UniRef90_P15025
contig_2	Pyrodigal	gene	113155	113358	.	+	.	ID=GCA000010485_04764_gene;locus_tag=GCA000010485_04764
contig_2	Pyrodigal	CDS	113155	113358	.	+	0	ID=GCA000010485_04764;Name=Aerotaxis sensor receptor%2C flavoprotein;locus_tag=GCA000010485_04764;product=Aerotaxis sensor receptor%2C flavoprotein;Parent=GCA000010485_04764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298677.1,SO:0001217,UniParc:UPI00005EFD40,UniRef:UniRef100_Q1R1W5,UniRef:UniRef50_Q1R1W5,UniRef:UniRef90_Q1R1W5
contig_2	Pyrodigal	gene	113742	114425	.	+	.	ID=GCA000010485_04765_gene;locus_tag=GCA000010485_04765
contig_2	Pyrodigal	CDS	113742	114425	.	+	0	ID=GCA000010485_04765;Name=Methyltransferase;locus_tag=GCA000010485_04765;product=Methyltransferase;Parent=GCA000010485_04765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000086169.1,SO:0001217,UniParc:UPI00005EFD3F,UniRef:UniRef100_C8CGM9,UniRef:UniRef50_C8CGM9,UniRef:UniRef90_C8CGM9
contig_2	Pyrodigal	gene	114426	114647	.	+	.	ID=GCA000010485_04766_gene;locus_tag=GCA000010485_04766;gene=yubE
contig_2	Pyrodigal	CDS	114426	114647	.	+	0	ID=GCA000010485_04766;Name=putative protein YubE;locus_tag=GCA000010485_04766;product=putative protein YubE;gene=yubE;Parent=GCA000010485_04766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001104873.1,SO:0001217,UniParc:UPI0000495F93,UniRef:UniRef100_Q08JK0,UniRef:UniRef50_Q9S4X1,UniRef:UniRef90_Q9S4X1
contig_2	Pyrodigal	gene	114661	115095	.	+	.	ID=GCA000010485_04767_gene;locus_tag=GCA000010485_04767
contig_2	Pyrodigal	CDS	114661	115095	.	+	0	ID=GCA000010485_04767;Name=DUF1380 domain-containing protein;locus_tag=GCA000010485_04767;product=DUF1380 domain-containing protein;Parent=GCA000010485_04767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000274508.1,SO:0001217,UniParc:UPI0000D50F7A,UniRef:UniRef100_C8CGN0,UniRef:UniRef50_A0A1U8QFI4,UniRef:UniRef90_W0FY97
contig_2	Pyrodigal	gene	115140	115910	.	+	.	ID=GCA000010485_04768_gene;locus_tag=GCA000010485_04768;gene=yubG
contig_2	Pyrodigal	CDS	115140	115910	.	+	0	ID=GCA000010485_04768;Name=putative protein YubG;locus_tag=GCA000010485_04768;product=putative protein YubG;gene=yubG;Parent=GCA000010485_04768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001004562.1,SO:0001217,UniParc:UPI0000D50F7B,UniRef:UniRef100_C8CGN1,UniRef:UniRef50_Q9S4W9,UniRef:UniRef90_Q9S4W9
contig_2	Pyrodigal	gene	116326	116751	.	+	.	ID=GCA000010485_04769_gene;locus_tag=GCA000010485_04769
contig_2	Pyrodigal	CDS	116326	116751	.	+	0	ID=GCA000010485_04769;Name=Antirestriction protein;locus_tag=GCA000010485_04769;product=Antirestriction protein;Parent=GCA000010485_04769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001198903.1,SO:0001217,UniParc:UPI0000D50F7C,UniRef:UniRef100_C8CGN2,UniRef:UniRef50_E7BTG5,UniRef:UniRef90_A0A075ME17
contig_2	Pyrodigal	gene	116798	117220	.	+	.	ID=GCA000010485_04770_gene;locus_tag=GCA000010485_04770
contig_2	Pyrodigal	CDS	116798	117220	.	+	0	ID=GCA000010485_04770;Name=Collagenase/protease;locus_tag=GCA000010485_04770;product=Collagenase/protease;Parent=GCA000010485_04770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000271708.1,SO:0001217,UniParc:UPI0000D50F7D,UniRef:UniRef100_C8CGN3,UniRef:UniRef50_P0C243,UniRef:UniRef90_E2GHH9
contig_2	Pyrodigal	gene	117217	117408	.	+	.	ID=GCA000010485_04771_gene;locus_tag=GCA000010485_04771
contig_2	Pyrodigal	CDS	117217	117408	.	+	0	ID=GCA000010485_04771;Name=Plasmid protein;locus_tag=GCA000010485_04771;product=Plasmid protein;Parent=GCA000010485_04771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001027516.1,SO:0001217,UniParc:UPI00003CEFC1,UniRef:UniRef100_Q1A2M1,UniRef:UniRef50_Q1A2M1,UniRef:UniRef90_Q1A2M1
contig_2	Infernal	gene	118279	118376	.	-	.	ID=GCA000010485_04772_gene;locus_tag=GCA000010485_04772;gene=AS-pc01
contig_2	Infernal	ncRNA	118279	118376	1.5e-18	-	.	ID=GCA000010485_04772;Name=Antisense to pHK01_035;locus_tag=GCA000010485_04772;product=Antisense to pHK01_035;Dbxref=RFAM:RF02875;Parent=GCA000010485_04772_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02875
contig_2	Pyrodigal	gene	118371	118601	.	+	.	ID=GCA000010485_04773_gene;locus_tag=GCA000010485_04773;gene=ydaB
contig_2	Pyrodigal	CDS	118371	118601	.	+	0	ID=GCA000010485_04773;Name=YdaB;locus_tag=GCA000010485_04773;product=YdaB;gene=ydaB;Parent=GCA000010485_04773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000155844.1,SO:0001217,UniParc:UPI0000D50F82,UniRef:UniRef100_E2GHI4,UniRef:UniRef50_A0A3P8KZE8,UniRef:UniRef90_E2GHI4
contig_2	Pyrodigal	gene	118653	120014	.	+	.	ID=GCA000010485_04774_gene;locus_tag=GCA000010485_04774
contig_2	Pyrodigal	CDS	118653	120014	.	+	0	ID=GCA000010485_04774;Name=DUF3560 domain-containing protein;locus_tag=GCA000010485_04774;product=DUF3560 domain-containing protein;Parent=GCA000010485_04774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000170671.1,SO:0001217,UniParc:UPI00005EFBA0,UniRef:UniRef100_C8CGN5,UniRef:UniRef50_A0A085FYV5,UniRef:UniRef90_Q849V6
contig_2	Pyrodigal	gene	120061	120624	.	+	.	ID=GCA000010485_04775_gene;locus_tag=GCA000010485_04775
contig_2	Pyrodigal	CDS	120061	120624	.	+	0	ID=GCA000010485_04775;Name=Methyltransferase small domain-containing protein;locus_tag=GCA000010485_04775;product=Methyltransferase small domain-containing protein;Parent=GCA000010485_04775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001298559.1,SO:0001217,UniParc:UPI00000B989E,UniRef:UniRef100_Q6SJ46,UniRef:UniRef50_Q849V5,UniRef:UniRef90_A0A6C7H555
contig_2	Pyrodigal	gene	120624	120860	.	+	.	ID=GCA000010485_04776_gene;locus_tag=GCA000010485_04776
contig_2	Pyrodigal	CDS	120624	120860	.	+	0	ID=GCA000010485_04776;Name=Transporter;locus_tag=GCA000010485_04776;product=Transporter;Parent=GCA000010485_04776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001337413.1,SO:0001217,UniParc:UPI0001FB4D08,UniRef:UniRef100_W1WZ27,UniRef:UniRef50_A0A6D0DV48,UniRef:UniRef90_A0A332KRS3
contig_2	Pyrodigal	gene	121470	121997	.	+	.	ID=GCA000010485_04777_gene;locus_tag=GCA000010485_04777
contig_2	Pyrodigal	CDS	121470	121997	.	+	0	ID=GCA000010485_04777;Name=Single-stranded DNA-binding protein;locus_tag=GCA000010485_04777;product=Single-stranded DNA-binding protein;Parent=GCA000010485_04777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000290833.1,SO:0001217,UniParc:UPI00005EFB9E,UniRef:UniRef100_A0A0J3V036,UniRef:UniRef50_D7GKH6,UniRef:UniRef90_A0A0J3V036
contig_2	Pyrodigal	gene	122054	122287	.	+	.	ID=GCA000010485_04778_gene;locus_tag=GCA000010485_04778
contig_2	Pyrodigal	CDS	122054	122287	.	+	0	ID=GCA000010485_04778;Name=DUF905 domain-containing protein;locus_tag=GCA000010485_04778;product=DUF905 domain-containing protein;Parent=GCA000010485_04778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000006018.1,SO:0001217,UniParc:UPI00005EFB9D,UniRef:UniRef100_A0A0J3XZQ1,UniRef:UniRef50_Q93GP6,UniRef:UniRef90_A0A0J3XZQ1