##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Haemophilus influenzae 86-028NP
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 1914490
contig_1	Bakta	region	1	1914490	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
contig_1	Pyrodigal	gene	2	1021	.	+	.	ID=GCA000012185_00001_gene;locus_tag=GCA000012185_00001;gene=gap
contig_1	Pyrodigal	CDS	2	1021	.	+	0	ID=GCA000012185_00001;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000012185_00001;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;pseudo=True;gene=gap;Parent=GCA000012185_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,SO:0001217,UniRef:UniRef50_P10097,UniRef:UniRef90_P44304;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1215	3014	.	+	.	ID=GCA000012185_00002_gene;locus_tag=GCA000012185_00002;gene=fAA1
contig_1	Pyrodigal	CDS	1215	3014	.	+	0	ID=GCA000012185_00002;Name=Putative long-chain-fatty-acid--CoA ligase;locus_tag=GCA000012185_00002;product=Putative long-chain-fatty-acid--CoA ligase;Dbxref=GO:0004467,GO:0005524,GO:0016405;gene=fAA1;Parent=GCA000012185_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1022,COG:I,RefSeq:WP_038440984.1,SO:0001217,UniParc:UPI00030A065D,UniRef:UniRef100_Q4QPP2,UniRef:UniRef50_P44446,UniRef:UniRef90_P44446;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	3051	3836	.	-	.	ID=GCA000012185_00003_gene;locus_tag=GCA000012185_00003;gene=cof
contig_1	Pyrodigal	CDS	3051	3836	.	-	0	ID=GCA000012185_00003;Name=Putative phosphatase HI_0003;locus_tag=GCA000012185_00003;product=Putative phosphatase HI_0003;Dbxref=GO:0000287,GO:0005829,GO:0016791;gene=cof;Parent=GCA000012185_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_038440983.1,SO:0001217,UniParc:UPI000045E9A8,UniRef:UniRef100_A0A346KAG3,UniRef:UniRef50_P44447,UniRef:UniRef90_P44447;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	3855	4319	.	-	.	ID=GCA000012185_00004_gene;locus_tag=GCA000012185_00004;gene=ybeY
contig_1	Pyrodigal	CDS	3855	4319	.	-	0	ID=GCA000012185_00004;Name=rRNA maturation RNase YbeY;locus_tag=GCA000012185_00004;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000012185_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_011271775.1,SO:0001217,UniParc:UPI000045E9A9,UniRef:UniRef100_Q4QPP0,UniRef:UniRef50_P71335,UniRef:UniRef90_P71335;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	4581	5393	.	-	.	ID=GCA000012185_00005_gene;locus_tag=GCA000012185_00005;gene=fdhD
contig_1	Pyrodigal	CDS	4581	5393	.	-	0	ID=GCA000012185_00005;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000012185_00005;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0009061,GO:0009326,GO:0015942,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000012185_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_011271776.1,SO:0001217,UniParc:UPI000053DFEC,UniRef:UniRef100_Q4QPN9,UniRef:UniRef50_P44449,UniRef:UniRef90_P44449
contig_1	Pyrodigal	gene	5664	8750	.	+	.	ID=GCA000012185_00006_gene;locus_tag=GCA000012185_00006;gene=fdnG
contig_1	Pyrodigal	CDS	5664	8750	.	+	0	ID=GCA000012185_00006;Name=formate dehydrogenase-N subunit alpha;locus_tag=GCA000012185_00006;product=formate dehydrogenase-N subunit alpha;Dbxref=GO:0008863,GO:0009055,GO:0009061,GO:0009326,GO:0015942,GO:0030151,GO:0042597,GO:0043546,GO:0047111,GO:0051539;gene=fdnG;Parent=GCA000012185_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_011271777.1,SO:0001217,UniParc:UPI000053DFED,UniRef:UniRef100_A0AB34I5Q1,UniRef:UniRef50_P32176,UniRef:UniRef90_P46448,codon on position 204 is a selenocysteine codon;ec_number=1.17.5.3;transl_except=(pos:6273..6275%2Caa:Sec)
contig_1	Infernal	regulatory_region	6270	6328	2.3e-12	+	.	ID=JPLKGDNPJF_103;Name=Selenocysteine insertion sequence 3;product=Selenocysteine insertion sequence 3;Dbxref=RFAM:RF01989;inference=profile:Rfam:RF01989;Note=SO:1001268;regulatory_class=recoding_stimulatory_region
contig_1	Pyrodigal	gene	8752	9690	.	+	.	ID=GCA000012185_00007_gene;locus_tag=GCA000012185_00007;gene=fdxH
contig_1	Pyrodigal	CDS	8752	9690	.	+	0	ID=GCA000012185_00007;Name=formate dehydrogenase subunit beta;locus_tag=GCA000012185_00007;product=formate dehydrogenase subunit beta;Dbxref=GO:0005886,GO:0008863,GO:0015944,GO:0016020,GO:0045333,GO:0046872,GO:0051539;gene=fdxH;Parent=GCA000012185_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_011271778.1,SO:0001217,UniParc:UPI000053DFEE,UniRef:UniRef100_A0A2R3FZI4,UniRef:UniRef50_P44450,UniRef:UniRef90_P44450;ec_number=1.17.1.9
contig_1	Pyrodigal	gene	9683	10399	.	+	.	ID=GCA000012185_00008_gene;locus_tag=GCA000012185_00008;gene=fdxH
contig_1	Pyrodigal	CDS	9683	10399	.	+	0	ID=GCA000012185_00008;Name=formate dehydrogenase subunit beta;locus_tag=GCA000012185_00008;product=formate dehydrogenase subunit beta;Dbxref=GO:0008863,GO:0015944,GO:0016020,GO:0051539;gene=fdxH;Parent=GCA000012185_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005657853.1,SO:0001217,UniParc:UPI000053DFEF,UniRef:UniRef100_A5UFI2,UniRef:UniRef50_A0A7G2ISQ7,UniRef:UniRef90_A5UFI2;ec_number=1.17.1.9
contig_1	Pyrodigal	gene	10469	11377	.	+	.	ID=GCA000012185_00009_gene;locus_tag=GCA000012185_00009;gene=fdhE
contig_1	Pyrodigal	CDS	10469	11377	.	+	0	ID=GCA000012185_00009;Name=formate dehydrogenase accessory protein FdhE;locus_tag=GCA000012185_00009;product=formate dehydrogenase accessory protein FdhE;Dbxref=GO:0005829,GO:0008199,GO:0051604;gene=fdhE;Parent=GCA000012185_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG3058,KEGG:K02380,RefSeq:WP_011271779.1,SO:0001217,UniParc:UPI000053DFF0,UniRef:UniRef100_Q4QPN5,UniRef:UniRef50_P44452,UniRef:UniRef90_P44452
contig_1	Pyrodigal	gene	11421	11861	.	-	.	ID=GCA000012185_00010_gene;locus_tag=GCA000012185_00010;gene=rimI
contig_1	Pyrodigal	CDS	11421	11861	.	-	0	ID=GCA000012185_00010;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000012185_00010;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0005737,GO:0006474,GO:0008080,GO:0008999;gene=rimI;Parent=GCA000012185_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_011271780.1,SO:0001217,UniParc:UPI000053DFF1,UniRef:UniRef100_A0A2R3FV65,UniRef:UniRef50_Q8ZJW4,UniRef:UniRef90_P44305;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	11864	12268	.	-	.	ID=GCA000012185_00011_gene;locus_tag=GCA000012185_00011;gene=holD
contig_1	Pyrodigal	CDS	11864	12268	.	-	0	ID=GCA000012185_00011;Name=DNA polymerase III subunit psi;locus_tag=GCA000012185_00011;product=DNA polymerase III subunit psi;Dbxref=GO:0003887,GO:0006260,GO:0008408,GO:0009360;gene=holD;Parent=GCA000012185_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3050,COG:L,KEGG:K02344,RefSeq:WP_011271781.1,SO:0001217,UniParc:UPI00003CD971,UniRef:UniRef100_A0A2R3FZB9,UniRef:UniRef50_P43750,UniRef:UniRef90_P43750;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	12374	13366	.	+	.	ID=GCA000012185_00012_gene;locus_tag=GCA000012185_00012;gene=rsmC
contig_1	Pyrodigal	CDS	12374	13366	.	+	0	ID=GCA000012185_00012;Name=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;locus_tag=GCA000012185_00012;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;Dbxref=GO:0003676,GO:0005737,GO:0006364,GO:0008990,GO:0052914;gene=rsmC;Parent=GCA000012185_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_011271782.1,SO:0001217,UniParc:UPI00003CD972,UniRef:UniRef100_Q4QPN2,UniRef:UniRef50_P44453,UniRef:UniRef90_P44453;ec_number=2.1.1.172
contig_1	Pyrodigal	gene	13434	14342	.	-	.	ID=GCA000012185_00013_gene;locus_tag=GCA000012185_00013;gene=era
contig_1	Pyrodigal	CDS	13434	14342	.	-	0	ID=GCA000012185_00013;Name=GTPase Era;locus_tag=GCA000012185_00013;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181;gene=era;Parent=GCA000012185_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_005657841.1,SO:0001217,UniParc:UPI000012A0EC,UniRef:UniRef100_P43728,UniRef:UniRef50_P06616,UniRef:UniRef90_P43728;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	14339	15022	.	-	.	ID=GCA000012185_00014_gene;locus_tag=GCA000012185_00014;gene=rnc
contig_1	Pyrodigal	CDS	14339	15022	.	-	0	ID=GCA000012185_00014;Name=ribonuclease III;locus_tag=GCA000012185_00014;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005829,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0019843,GO:0046872;gene=rnc;Parent=GCA000012185_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_005649882.1,SO:0001217,UniParc:UPI000039AD0D,UniRef:UniRef100_Q4QPN0,UniRef:UniRef50_P57805,UniRef:UniRef90_P44441;ec_number=3.1.26.3
contig_1	Pyrodigal	gene	15024	16073	.	-	.	ID=GCA000012185_00015_gene;locus_tag=GCA000012185_00015;gene=lepB
contig_1	Pyrodigal	CDS	15024	16073	.	-	0	ID=GCA000012185_00015;Name=signal peptidase I;locus_tag=GCA000012185_00015;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465;gene=lepB;Parent=GCA000012185_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_005687454.1,SO:0001217,UniParc:UPI00003CD975,UniRef:UniRef100_Q4QPM9,UniRef:UniRef50_P44454,UniRef:UniRef90_P44454;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	16082	17878	.	-	.	ID=GCA000012185_00016_gene;locus_tag=GCA000012185_00016;gene=lepA
contig_1	Pyrodigal	CDS	16082	17878	.	-	0	ID=GCA000012185_00016;Name=translation elongation factor 4;locus_tag=GCA000012185_00016;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:0097216,GO:1990606;gene=lepA;Parent=GCA000012185_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_005652644.1,SO:0001217,UniParc:UPI000053DFF2,UniRef:UniRef100_Q4QPM8,UniRef:UniRef50_Q83BK3,UniRef:UniRef90_Q7VL73;ec_number=3.6.5.n1
contig_1	Pyrodigal	gene	18047	18430	.	-	.	ID=GCA000012185_00017_gene;locus_tag=GCA000012185_00017;gene=grcA
contig_1	Pyrodigal	CDS	18047	18430	.	-	0	ID=GCA000012185_00017;Name=autonomous glycyl radical cofactor GrcA;locus_tag=GCA000012185_00017;product=autonomous glycyl radical cofactor GrcA;Dbxref=GO:0003824,GO:0005829,GO:0008861;gene=grcA;Parent=GCA000012185_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3445,COG:H,RefSeq:WP_005687457.1,SO:0001217,UniParc:UPI00003CDCB2,UniRef:UniRef100_Q4QPM7,UniRef:UniRef50_Q9CPH6,UniRef:UniRef90_Q9CPH6
contig_1	Pyrodigal	gene	18688	19347	.	+	.	ID=GCA000012185_00018_gene;locus_tag=GCA000012185_00018;gene=ung
contig_1	Pyrodigal	CDS	18688	19347	.	+	0	ID=GCA000012185_00018;Name=uracil-DNA glycosylase;locus_tag=GCA000012185_00018;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0016799,GO:0097510;gene=ung;Parent=GCA000012185_00018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_005687458.1,SO:0001217,UniParc:UPI000053DFF3,UniRef:UniRef100_Q4QPM6,UniRef:UniRef50_P12295,UniRef:UniRef90_P43731;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	19417	20841	.	-	.	ID=GCA000012185_00019_gene;locus_tag=GCA000012185_00019;gene=miaB
contig_1	Pyrodigal	CDS	19417	20841	.	-	0	ID=GCA000012185_00019;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000012185_00019;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000012185_00019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_005687460.1,SO:0001217,UniParc:UPI00003CDA50,UniRef:UniRef100_Q4QPM5,UniRef:UniRef50_Q9KTE0,UniRef:UniRef90_Q9L699;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	21224	22663	.	-	.	ID=GCA000012185_00020_gene;locus_tag=GCA000012185_00020;gene=citT
contig_1	Pyrodigal	CDS	21224	22663	.	-	0	ID=GCA000012185_00020;Name=putative transporter HI_0020;locus_tag=GCA000012185_00020;product=putative transporter HI_0020;Dbxref=GO:0005886,GO:0022857;gene=citT;Parent=GCA000012185_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,KEGG:K03319,RefSeq:WP_005652640.1,SO:0001217,UniParc:UPI000013A353,UniRef:UniRef100_Q57048,UniRef:UniRef50_P75763,UniRef:UniRef90_Q57048
contig_1	Pyrodigal	gene	22665	24062	.	-	.	ID=GCA000012185_00021_gene;locus_tag=GCA000012185_00021;gene=citXG
contig_1	Pyrodigal	CDS	22665	24062	.	-	0	ID=GCA000012185_00021;Name=Protein CitXG;locus_tag=GCA000012185_00021;product=Protein CitXG;Dbxref=GO:0005524,GO:0046917,GO:0050519,GO:0051191;gene=citXG;Parent=GCA000012185_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3697,COG:HI,KEGG:K13927,RefSeq:WP_005687461.1,SO:0001217,UniParc:UPI000053DFF4,UniRef:UniRef100_Q4QPM3,UniRef:UniRef50_P44458,UniRef:UniRef90_P44458;ec_number=2.7.7.61
contig_1	Pyrodigal	gene	24243	25745	.	-	.	ID=GCA000012185_00022_gene;locus_tag=GCA000012185_00022;gene=citF
contig_1	Pyrodigal	CDS	24243	25745	.	-	0	ID=GCA000012185_00022;Name=citrate lyase subunit alpha;locus_tag=GCA000012185_00022;product=citrate lyase subunit alpha;Dbxref=GO:0005737,GO:0006084,GO:0006113,GO:0008814,GO:0008815,GO:0009346;gene=citF;Parent=GCA000012185_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3051,KEGG:K01643,RefSeq:WP_011271783.1,SO:0001217,UniParc:UPI00003CD7AE,UniRef:UniRef100_Q4QPM2,UniRef:UniRef50_P75726,UniRef:UniRef90_P44459;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	25760	26635	.	-	.	ID=GCA000012185_00023_gene;locus_tag=GCA000012185_00023;gene=citE
contig_1	Pyrodigal	CDS	25760	26635	.	-	0	ID=GCA000012185_00023;Name=citrate (pro-3S)-lyase subunit beta;locus_tag=GCA000012185_00023;product=citrate (pro-3S)-lyase subunit beta;Dbxref=GO:0000287,GO:0005737,GO:0006084,GO:0006107,GO:0006113,GO:0008815,GO:0008816,GO:0009346;gene=citE;Parent=GCA000012185_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2301,COG:G,RefSeq:WP_005649868.1,SO:0001217,UniParc:UPI000053DFF5,UniRef:UniRef100_A0A0H3PC17,UniRef:UniRef50_P17725,UniRef:UniRef90_P44460;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	26632	26919	.	-	.	ID=GCA000012185_00024_gene;locus_tag=GCA000012185_00024;gene=citD
contig_1	Pyrodigal	CDS	26632	26919	.	-	0	ID=GCA000012185_00024;Name=citrate lyase acyl carrier protein;locus_tag=GCA000012185_00024;product=citrate lyase acyl carrier protein;Dbxref=GO:0005737,GO:0006113,GO:0008815,GO:0009346;gene=citD;Parent=GCA000012185_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3052,RefSeq:WP_005649866.1,SO:0001217,UniParc:UPI00003CD7AD,UniRef:UniRef100_Q4QPM0,UniRef:UniRef50_Q6D421,UniRef:UniRef90_Q4QPM0;ec_number=4.1.3.6
contig_1	Pyrodigal	gene	26957	27964	.	-	.	ID=GCA000012185_00025_gene;locus_tag=GCA000012185_00025;gene=citC
contig_1	Pyrodigal	CDS	26957	27964	.	-	0	ID=GCA000012185_00025;Name=[citrate (pro-3S)-lyase] ligase;locus_tag=GCA000012185_00025;product=[citrate (pro-3S)-lyase] ligase;Dbxref=GO:0005524,GO:0006101,GO:0008771,GO:0009058,GO:0016747;gene=citC;Parent=GCA000012185_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3053,KEGG:K01910,RefSeq:WP_011271784.1,SO:0001217,UniParc:UPI00003CD7AC,UniRef:UniRef100_A0A2R3G060,UniRef:UniRef50_P44462,UniRef:UniRef90_P44462;ec_number=6.2.1.22
contig_1	Pyrodigal	gene	28215	29177	.	-	.	ID=GCA000012185_00026_gene;locus_tag=GCA000012185_00026;gene=lipA
contig_1	Pyrodigal	CDS	28215	29177	.	-	0	ID=GCA000012185_00026;Name=lipoyl synthase;locus_tag=GCA000012185_00026;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000012185_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_011271785.1,SO:0001217,UniParc:UPI00003CD7AB,UniRef:UniRef100_Q4QPL8,UniRef:UniRef50_P60716,UniRef:UniRef90_Q0I1H8;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	29231	29869	.	-	.	ID=GCA000012185_00027_gene;locus_tag=GCA000012185_00027;gene=lipB
contig_1	Pyrodigal	CDS	29231	29869	.	-	0	ID=GCA000012185_00027;Name=lipoyl(octanoyl) transferase LipB;locus_tag=GCA000012185_00027;product=lipoyl(octanoyl) transferase LipB;Dbxref=GO:0005737,GO:0009249,GO:0033819;gene=lipB;Parent=GCA000012185_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0321,COG:H,RefSeq:WP_005649858.1,SO:0001217,UniParc:UPI00003CD7AA,UniRef:UniRef100_Q4QPL7,UniRef:UniRef50_P44464,UniRef:UniRef90_P44464;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	29871	30149	.	-	.	ID=GCA000012185_00028_gene;locus_tag=GCA000012185_00028;gene=ybeD
contig_1	Pyrodigal	CDS	29871	30149	.	-	0	ID=GCA000012185_00028;Name=DUF493 domain-containing protein;locus_tag=GCA000012185_00028;product=DUF493 domain-containing protein;Dbxref=GO:0005829;gene=ybeD;Parent=GCA000012185_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2921,COG:T,RefSeq:WP_005649857.1,SO:0001217,UniParc:UPI00000378C0,UniRef:UniRef100_P44465,UniRef:UniRef50_P44465,UniRef:UniRef90_P44465
contig_1	Pyrodigal	gene	30205	31386	.	-	.	ID=GCA000012185_00029_gene;locus_tag=GCA000012185_00029;gene=dacA
contig_1	Pyrodigal	CDS	30205	31386	.	-	0	ID=GCA000012185_00029;Name=D-alanyl-D-alanine carboxypeptidase DacA;locus_tag=GCA000012185_00029;product=D-alanyl-D-alanine carboxypeptidase DacA;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0009002,GO:0009252,GO:0071555;gene=dacA;Parent=GCA000012185_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,KEGG:K07258,RefSeq:WP_011271786.1,SO:0001217,UniParc:UPI000053DFF6,UniRef:UniRef100_A0A2R3FV88,UniRef:UniRef50_P0AEB2,UniRef:UniRef90_P44466;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	31402	32265	.	-	.	ID=GCA000012185_00030_gene;locus_tag=GCA000012185_00030;gene=rlpA
contig_1	Pyrodigal	CDS	31402	32265	.	-	0	ID=GCA000012185_00030;Name=Endolytic peptidoglycan transglycosylase RlpA;locus_tag=GCA000012185_00030;product=Endolytic peptidoglycan transglycosylase RlpA;Dbxref=GO:0000270,GO:0008932,GO:0042834,GO:0071555;gene=rlpA;Parent=GCA000012185_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0797,COG:M,KEGG:K03642,RefSeq:WP_005689889.1,SO:0001217,UniParc:UPI000053DFF7,UniRef:UniRef100_A0A0Y7JW10,UniRef:UniRef50_Q57092,UniRef:UniRef90_Q57092;ec_number=4.2.2.-
contig_1	Pyrodigal	gene	32318	33433	.	-	.	ID=GCA000012185_00031_gene;locus_tag=GCA000012185_00031;gene=rodA
contig_1	Pyrodigal	CDS	32318	33433	.	-	0	ID=GCA000012185_00031;Name=rod shape-determining protein RodA;locus_tag=GCA000012185_00031;product=rod shape-determining protein RodA;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0015648,GO:0016020,GO:0032153,GO:0051301,GO:0071555;gene=rodA;Parent=GCA000012185_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_011271787.1,SO:0001217,UniParc:UPI000053DFF8,UniRef:UniRef100_A0A2S9S836,UniRef:UniRef50_P44468,UniRef:UniRef90_P44468;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	33423	35378	.	-	.	ID=GCA000012185_00032_gene;locus_tag=GCA000012185_00032;gene=mrdA
contig_1	Pyrodigal	CDS	33423	35378	.	-	0	ID=GCA000012185_00032;Name=penicillin-binding protein 2;locus_tag=GCA000012185_00032;product=penicillin-binding protein 2;Dbxref=GO:0003824,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0009002,GO:0009252,GO:0016020,GO:0071555,GO:0071972;gene=mrdA;Parent=GCA000012185_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K05515,RefSeq:WP_011271788.1,SO:0001217,UniParc:UPI000053DFF9,UniRef:UniRef100_A0AAJ8WC76,UniRef:UniRef50_P0AD65,UniRef:UniRef90_P44469;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	35400	35867	.	-	.	ID=GCA000012185_00033_gene;locus_tag=GCA000012185_00033;gene=rlmH
contig_1	Pyrodigal	CDS	35400	35867	.	-	0	ID=GCA000012185_00033;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA000012185_00033;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA000012185_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,KEGG:K00783,RefSeq:WP_005657809.1,SO:0001217,UniParc:UPI000053DFFA,UniRef:UniRef100_Q4QPL1,UniRef:UniRef50_Q88DL7,UniRef:UniRef90_P44470;ec_number=2.1.1.177
contig_1	Pyrodigal	gene	35921	36229	.	-	.	ID=GCA000012185_00034_gene;locus_tag=GCA000012185_00034;gene=rsfS
contig_1	Pyrodigal	CDS	35921	36229	.	-	0	ID=GCA000012185_00034;Name=ribosome silencing factor;locus_tag=GCA000012185_00034;product=ribosome silencing factor;Dbxref=GO:0005737,GO:0017148,GO:0042256,GO:0043022,GO:0043023,GO:0090071;gene=rsfS;Parent=GCA000012185_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_005635481.1,SO:0001217,UniParc:UPI000013A2FD,UniRef:UniRef100_P44471,UniRef:UniRef50_P44471,UniRef:UniRef90_P44471
contig_1	Pyrodigal	gene	36354	38009	.	-	.	ID=GCA000012185_00035_gene;locus_tag=GCA000012185_00035;gene=ybjL
contig_1	Pyrodigal	CDS	36354	38009	.	-	0	ID=GCA000012185_00035;Name=putative transporter;locus_tag=GCA000012185_00035;product=putative transporter;Dbxref=GO:0005886,GO:0006813,GO:0008324;gene=ybjL;Parent=GCA000012185_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2985,COG:R,KEGG:K07085,RefSeq:WP_011271789.1,SO:0001217,UniParc:UPI000053DFFB,UniRef:UniRef100_Q4QPK9,UniRef:UniRef50_P60872,UniRef:UniRef90_P44472
contig_1	Pyrodigal	gene	38215	39993	.	+	.	ID=GCA000012185_00036_gene;locus_tag=GCA000012185_00036;gene=yddA
contig_1	Pyrodigal	CDS	38215	39993	.	+	0	ID=GCA000012185_00036;Name=putative ABC transporter ATP-binding protein HI_0036;locus_tag=GCA000012185_00036;product=putative ABC transporter ATP-binding protein HI_0036;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0140359;gene=yddA;Parent=GCA000012185_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4178,COG:R,RefSeq:WP_011271790.1,SO:0001217,UniParc:UPI000053DFFC,UniRef:UniRef100_A0AAJ8WC11,UniRef:UniRef50_Q57335,UniRef:UniRef90_Q57335
contig_1	Pyrodigal	gene	40123	41178	.	+	.	ID=GCA000012185_00037_gene;locus_tag=GCA000012185_00037;gene=mreB
contig_1	Pyrodigal	CDS	40123	41178	.	+	0	ID=GCA000012185_00037;Name=Cell shape-determining protein MreB;locus_tag=GCA000012185_00037;product=Cell shape-determining protein MreB;Dbxref=GO:0000902,GO:0005524,GO:0005737,GO:0008360;gene=mreB;Parent=GCA000012185_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1077,COG:DZ,RefSeq:WP_005657804.1,SO:0001217,UniParc:UPI000012F55E,UniRef:UniRef100_P44474,UniRef:UniRef50_P0A9X4,UniRef:UniRef90_P44474
contig_1	Pyrodigal	gene	41258	42313	.	+	.	ID=GCA000012185_00038_gene;locus_tag=GCA000012185_00038;gene=mreC
contig_1	Pyrodigal	CDS	41258	42313	.	+	0	ID=GCA000012185_00038;Name=rod shape-determining protein MreC;locus_tag=GCA000012185_00038;product=rod shape-determining protein MreC;Dbxref=GO:0005886,GO:0008360;gene=mreC;Parent=GCA000012185_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_005657802.1,SO:0001217,UniParc:UPI000053DFFE,UniRef:UniRef100_A0A0H3PC10,UniRef:UniRef50_P44475,UniRef:UniRef90_P44475
contig_1	Pyrodigal	gene	42313	42801	.	+	.	ID=GCA000012185_00039_gene;locus_tag=GCA000012185_00039;gene=mreD
contig_1	Pyrodigal	CDS	42313	42801	.	+	0	ID=GCA000012185_00039;Name=rod shape-determining protein MreD;locus_tag=GCA000012185_00039;product=rod shape-determining protein MreD;Dbxref=GO:0005886,GO:0008360,GO:0016020;gene=mreD;Parent=GCA000012185_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_005657800.1,SO:0001217,UniParc:UPI000012F563,UniRef:UniRef100_P44476,UniRef:UniRef50_P44476,UniRef:UniRef90_P44476
contig_1	Pyrodigal	gene	42852	43628	.	-	.	ID=GCA000012185_00040_gene;locus_tag=GCA000012185_00040
contig_1	Pyrodigal	CDS	42852	43628	.	-	0	ID=GCA000012185_00040;Name=putative protein HI_0040;locus_tag=GCA000012185_00040;product=putative protein HI_0040;Parent=GCA000012185_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005657798.1,SO:0001217,UniParc:UPI0000139169,UniRef:UniRef100_P43929,UniRef:UniRef50_P43929,UniRef:UniRef90_P43929
contig_1	Pyrodigal	gene	43638	44441	.	-	.	ID=GCA000012185_00041_gene;locus_tag=GCA000012185_00041;gene=xthA
contig_1	Pyrodigal	CDS	43638	44441	.	-	0	ID=GCA000012185_00041;Name=exodeoxyribonuclease III;locus_tag=GCA000012185_00041;product=exodeoxyribonuclease III;Dbxref=GO:0003677,GO:0004519,GO:0006281,GO:0008311,GO:0046872;gene=xthA;Parent=GCA000012185_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0708,COG:L,KEGG:K01142,RefSeq:WP_011271791.1,SO:0001217,UniParc:UPI000053DFFF,UniRef:UniRef100_A0A2S9S843,UniRef:UniRef50_P09030,UniRef:UniRef90_P44318;ec_number=3.1.11.2
contig_1	Pyrodigal	gene	44489	45163	.	-	.	ID=GCA000012185_00042_gene;locus_tag=GCA000012185_00042;gene=rluA
contig_1	Pyrodigal	CDS	44489	45163	.	-	0	ID=GCA000012185_00042;Name=putative RNA pseudouridine synthase HI_0042;locus_tag=GCA000012185_00042;product=putative RNA pseudouridine synthase HI_0042;Dbxref=GO:0000455,GO:0003723,GO:0009982,GO:0140098;gene=rluA;Parent=GCA000012185_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_011271792.1,SO:0001217,UniParc:UPI000053E000,UniRef:UniRef100_A0A2S9S845,UniRef:UniRef50_P43930,UniRef:UniRef90_P43930;ec_number=5.4.99.-
contig_1	Pyrodigal	gene	45163	46227	.	-	.	ID=GCA000012185_00043_gene;locus_tag=GCA000012185_00043;gene=ycjF
contig_1	Pyrodigal	CDS	45163	46227	.	-	0	ID=GCA000012185_00043;Name=UPF0283 membrane protein HI_0043;locus_tag=GCA000012185_00043;product=UPF0283 membrane protein HI_0043;Dbxref=GO:0005886;gene=ycjF;Parent=GCA000012185_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3768,COG:S,RefSeq:WP_011271793.1,SO:0001217,UniParc:UPI000053E001,UniRef:UniRef100_A0A2S9S844,UniRef:UniRef50_P43931,UniRef:UniRef90_P43931
contig_1	Pyrodigal	gene	46287	46949	.	-	.	ID=GCA000012185_00044_gene;locus_tag=GCA000012185_00044;gene=ybhL
contig_1	Pyrodigal	CDS	46287	46949	.	-	0	ID=GCA000012185_00044;Name=putative protein HI_0044;locus_tag=GCA000012185_00044;product=putative protein HI_0044;Dbxref=GO:0005262,GO:0005886,GO:0030162,GO:0043066;gene=ybhL;Parent=GCA000012185_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_005649826.1,SO:0001217,UniParc:UPI000013A5BD,UniRef:UniRef100_P44477,UniRef:UniRef50_P0AAC6,UniRef:UniRef90_P44477
contig_1	tRNAscan-SE	gene	47130	47219	.	+	.	ID=GCA000012185_00045_gene;locus_tag=GCA000012185_00045;gene=trnS
contig_1	tRNAscan-SE	tRNA	47130	47219	.	+	.	ID=GCA000012185_00045;Name=tRNA-Ser(tga);locus_tag=GCA000012185_00045;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000012185_00045_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	47276	47830	.	-	.	ID=GCA000012185_00046_gene;locus_tag=GCA000012185_00046;gene=ytfJ
contig_1	Pyrodigal	CDS	47276	47830	.	-	0	ID=GCA000012185_00046;Name=putative protein HI_0045;locus_tag=GCA000012185_00046;product=putative protein HI_0045;Dbxref=GO:0042597;gene=ytfJ;Parent=GCA000012185_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3054,COG:R,KEGG:K07109,RefSeq:WP_005687488.1,SO:0001217,UniParc:UPI000045E9C1,UniRef:UniRef100_A0A2R3GKL8,UniRef:UniRef50_P44478,UniRef:UniRef90_P44478
contig_1	Pyrodigal	gene	47933	48259	.	+	.	ID=GCA000012185_00047_gene;locus_tag=GCA000012185_00047;gene=yjdM
contig_1	Pyrodigal	CDS	47933	48259	.	+	0	ID=GCA000012185_00047;Name=Protein YjdM-like protein;locus_tag=GCA000012185_00047;product=Protein YjdM-like protein;Dbxref=GO:0005829;gene=yjdM;Parent=GCA000012185_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2824,COG:R,RefSeq:WP_010868923.1,SO:0001217,UniParc:UPI000019B2D6,UniRef:UniRef100_P44479,UniRef:UniRef50_P44479,UniRef:UniRef90_P44479
contig_1	Pyrodigal	gene	48312	48950	.	-	.	ID=GCA000012185_00048_gene;locus_tag=GCA000012185_00048;gene=eda
contig_1	Pyrodigal	CDS	48312	48950	.	-	0	ID=GCA000012185_00048;Name=2-dehydro-3-deoxy-phosphogluconate aldolase;locus_tag=GCA000012185_00048;product=2-dehydro-3-deoxy-phosphogluconate aldolase;Dbxref=GO:0005737,GO:0008675,GO:0008700;gene=eda;Parent=GCA000012185_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0800,COG:G,KEGG:K01625,RefSeq:WP_011271794.1,SO:0001217,UniParc:UPI00003CDCC1,UniRef:UniRef100_A0A2S9S850,UniRef:UniRef50_P44480,UniRef:UniRef90_P44480;ec_number=4.1.2.14
contig_1	Pyrodigal	gene	48959	50362	.	-	.	ID=GCA000012185_00049_gene;locus_tag=GCA000012185_00049;gene=uxaC
contig_1	Pyrodigal	CDS	48959	50362	.	-	0	ID=GCA000012185_00049;Name=glucuronate isomerase;locus_tag=GCA000012185_00049;product=glucuronate isomerase;Dbxref=GO:0006064,GO:0008880,GO:0019698,GO:0042840;gene=uxaC;Parent=GCA000012185_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01812,RefSeq:WP_011271795.1,SO:0001217,UniParc:UPI00003A8C11,UniRef:UniRef100_Q4QPJ6,UniRef:UniRef50_Q8ZM23,UniRef:UniRef90_Q4QPJ6;ec_number=5.3.1.12
contig_1	Pyrodigal	gene	50372	51217	.	-	.	ID=GCA000012185_00050_gene;locus_tag=GCA000012185_00050;gene=fabG
contig_1	Pyrodigal	CDS	50372	51217	.	-	0	ID=GCA000012185_00050;Name=putative oxidoreductase HI_0048;locus_tag=GCA000012185_00050;product=putative oxidoreductase HI_0048;Dbxref=GO:0016616;gene=fabG;Parent=GCA000012185_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,KEGG:K01686,RefSeq:WP_038440966.1,SO:0001217,UniParc:UPI0003045D2B,UniRef:UniRef100_A0A346JV85,UniRef:UniRef50_P44481,UniRef:UniRef90_P44481;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	51229	51627	.	-	.	ID=GCA000012185_00051_gene;locus_tag=GCA000012185_00051;gene=kdgK;pseudogene=unitary
contig_1	Pyrodigal	CDS	51229	51627	.	-	0	ID=GCA000012185_00051;Name=2-dehydro-3-deoxygluconokinase;locus_tag=GCA000012185_00051;product=2-dehydro-3-deoxygluconokinase;Dbxref=GO:0005524,GO:0005829,GO:0006974,GO:0008673,GO:0019698,GO:0042840;pseudogene=unitary;gene=kdgK;Parent=GCA000012185_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,SO:0001217,UniRef:UniRef50_P44482,UniRef:UniRef90_P44482;ec_number=2.7.1.45
contig_1	Pyrodigal	gene	51594	52172	.	-	.	ID=GCA000012185_00052_gene;locus_tag=GCA000012185_00052
contig_1	Pyrodigal	CDS	51594	52172	.	-	0	ID=GCA000012185_00052;Name=sugar kinase;locus_tag=GCA000012185_00052;product=sugar kinase;Parent=GCA000012185_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI002357666B
contig_1	Pyrodigal	gene	52192	53463	.	-	.	ID=GCA000012185_00053_gene;locus_tag=GCA000012185_00053;gene=dctQ
contig_1	Pyrodigal	CDS	52192	53463	.	-	0	ID=GCA000012185_00053;Name=Putative TRAP transporter large permease protein HI_0050;locus_tag=GCA000012185_00053;product=Putative TRAP transporter large permease protein HI_0050;Dbxref=GO:0005886,GO:0022857;gene=dctQ;Parent=GCA000012185_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1593,COG:G,RefSeq:WP_005668000.1,SO:0001217,UniParc:UPI000039AD24,UniRef:UniRef100_P44483,UniRef:UniRef50_P44483,UniRef:UniRef90_P44483
contig_1	Pyrodigal	gene	53473	53943	.	-	.	ID=GCA000012185_00054_gene;locus_tag=GCA000012185_00054;gene=dctM
contig_1	Pyrodigal	CDS	53473	53943	.	-	0	ID=GCA000012185_00054;Name=Putative TRAP transporter small permease protein HI_0051;locus_tag=GCA000012185_00054;product=Putative TRAP transporter small permease protein HI_0051;Dbxref=GO:0005886,GO:0015740,GO:0022857;gene=dctM;Parent=GCA000012185_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3090,COG:G,SO:0001217,UniRef:UniRef50_P44484,UniRef:UniRef90_P44484
contig_1	Pyrodigal	gene	54009	54995	.	-	.	ID=GCA000012185_00055_gene;locus_tag=GCA000012185_00055;gene=dctP
contig_1	Pyrodigal	CDS	54009	54995	.	-	0	ID=GCA000012185_00055;Name=putative protein HI_0052;locus_tag=GCA000012185_00055;product=putative protein HI_0052;Dbxref=GO:0030288,GO:0055085;gene=dctP;Parent=GCA000012185_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1638,COG:G,RefSeq:WP_005667998.1,SO:0001217,UniParc:UPI000039A7AA,UniRef:UniRef100_A0A2R3FU53,UniRef:UniRef50_P71336,UniRef:UniRef90_P71336
contig_1	Pyrodigal	gene	55022	56050	.	-	.	ID=GCA000012185_00056_gene;locus_tag=GCA000012185_00056;gene=tdh
contig_1	Pyrodigal	CDS	55022	56050	.	-	0	ID=GCA000012185_00056;Name=putative zinc-type alcohol dehydrogenase-like protein HI_0053;locus_tag=GCA000012185_00056;product=putative zinc-type alcohol dehydrogenase-like protein HI_0053;Dbxref=GO:0016491,GO:0046872;gene=tdh;Parent=GCA000012185_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_005667996.1,SO:0001217,UniParc:UPI000039AD26,UniRef:UniRef100_A0A2R3FUA6,UniRef:UniRef50_Q57517,UniRef:UniRef90_Q57517;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	56211	56960	.	+	.	ID=GCA000012185_00057_gene;locus_tag=GCA000012185_00057;gene=uxuR
contig_1	Pyrodigal	CDS	56211	56960	.	+	0	ID=GCA000012185_00057;Name=Uxu operon regulator;locus_tag=GCA000012185_00057;product=Uxu operon regulator;Dbxref=GO:0003677,GO:0003700;gene=uxuR;Parent=GCA000012185_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,KEGG:K13637,RefSeq:WP_005687499.1,SO:0001217,UniParc:UPI000019B2D7,UniRef:UniRef100_P44487,UniRef:UniRef50_P44487,UniRef:UniRef90_P44487
contig_1	Pyrodigal	gene	56988	58172	.	+	.	ID=GCA000012185_00058_gene;locus_tag=GCA000012185_00058;gene=uxuA
contig_1	Pyrodigal	CDS	56988	58172	.	+	0	ID=GCA000012185_00058;Name=mannonate dehydratase;locus_tag=GCA000012185_00058;product=mannonate dehydratase;Dbxref=GO:0006064,GO:0008198,GO:0008927,GO:0030145,GO:0042840;gene=uxuA;Parent=GCA000012185_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1312,COG:G,KEGG:K01686,RefSeq:WP_011271799.1,SO:0001217,UniParc:UPI000039A7AD,UniRef:UniRef100_Q4QPI9,UniRef:UniRef50_P24215,UniRef:UniRef90_P44488;ec_number=4.2.1.8
contig_1	Pyrodigal	gene	58225	58938	.	-	.	ID=GCA000012185_00059_gene;locus_tag=GCA000012185_00059;gene=terC
contig_1	Pyrodigal	CDS	58225	58938	.	-	0	ID=GCA000012185_00059;Name=UPF0053 protein HI_0056;locus_tag=GCA000012185_00059;product=UPF0053 protein HI_0056;Dbxref=GO:0005886;gene=terC;Parent=GCA000012185_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_011271800.1,SO:0001217,UniParc:UPI000053E005,UniRef:UniRef100_Q4QPI8,UniRef:UniRef50_P43932,UniRef:UniRef90_P43932
contig_1	Pyrodigal	gene	59036	60865	.	-	.	ID=GCA000012185_00060_gene;locus_tag=GCA000012185_00060;gene=uvrC
contig_1	Pyrodigal	CDS	59036	60865	.	-	0	ID=GCA000012185_00060;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000012185_00060;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005737,GO:0006289,GO:0006974,GO:0009380,GO:0009381,GO:0009432;gene=uvrC;Parent=GCA000012185_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_011271801.1,SO:0001217,UniParc:UPI000053E006,UniRef:UniRef100_Q4QPI7,UniRef:UniRef50_P0A8G0,UniRef:UniRef90_P44489
contig_1	Pyrodigal	gene	60867	61631	.	-	.	ID=GCA000012185_00061_gene;locus_tag=GCA000012185_00061;gene=kdsB
contig_1	Pyrodigal	CDS	60867	61631	.	-	0	ID=GCA000012185_00061;Name=3-deoxy-manno-octulosonate cytidylyltransferase;locus_tag=GCA000012185_00061;product=3-deoxy-manno-octulosonate cytidylyltransferase;Dbxref=GO:0005829,GO:0008690,GO:0009103,GO:0009244,GO:0033468;gene=kdsB;Parent=GCA000012185_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1212,COG:M,KEGG:K00979,RefSeq:WP_005663240.1,SO:0001217,UniParc:UPI00003CDA97,UniRef:UniRef100_Q4QPI6,UniRef:UniRef50_P44490,UniRef:UniRef90_P44490,VFDB:VFC0258,VFDB:VFG013236;ec_number=2.7.7.38
contig_1	Pyrodigal	gene	61702	62700	.	-	.	ID=GCA000012185_00062_gene;locus_tag=GCA000012185_00062;gene=lpxK
contig_1	Pyrodigal	CDS	61702	62700	.	-	0	ID=GCA000012185_00062;Name=tetraacyldisaccharide 4'-kinase;locus_tag=GCA000012185_00062;product=tetraacyldisaccharide 4'-kinase;Dbxref=GO:0005524,GO:0005886,GO:0009029,GO:0009244,GO:0009245;gene=lpxK;Parent=GCA000012185_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1663,COG:M,KEGG:K00912,RefSeq:WP_011271802.1,SO:0001217,UniParc:UPI000053E007,UniRef:UniRef100_Q4QPI5,UniRef:UniRef50_Q65U20,UniRef:UniRef90_P44491,VFDB:VFC0258,VFDB:VFG013242;ec_number=2.7.1.130
contig_1	Pyrodigal	gene	62773	64536	.	-	.	ID=GCA000012185_00063_gene;locus_tag=GCA000012185_00063;gene=msbA
contig_1	Pyrodigal	CDS	62773	64536	.	-	0	ID=GCA000012185_00063;Name=lipid transporter ATP-binding/permease;locus_tag=GCA000012185_00063;product=lipid transporter ATP-binding/permease;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0034040,GO:0055085,GO:0140359;gene=msbA;Parent=GCA000012185_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_011271803.1,SO:0001217,UniParc:UPI000053E008,UniRef:UniRef100_Q4QPI4,UniRef:UniRef50_P60752,UniRef:UniRef90_P44407,VFDB:VFC0258,VFDB:VFG013248;ec_number=7.5.2.6
contig_1	Pyrodigal	gene	64577	66943	.	-	.	ID=GCA000012185_00064_gene;locus_tag=GCA000012185_00064;gene=rec2
contig_1	Pyrodigal	CDS	64577	66943	.	-	0	ID=GCA000012185_00064;Name=DNA internalization-related competence protein ComEC/Rec2;locus_tag=GCA000012185_00064;product=DNA internalization-related competence protein ComEC/Rec2;Dbxref=GO:0005215,GO:0005886,GO:0009290,GO:0016020,GO:0030420;gene=rec2;Parent=GCA000012185_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2333,COG:U,KEGG:K02238,RefSeq:WP_011271804.1,SO:0001217,UniParc:UPI000053E009,UniRef:UniRef100_A0AAJ8WC56,UniRef:UniRef50_P44408,UniRef:UniRef90_P44408
contig_1	Pyrodigal	gene	67202	67639	.	+	.	ID=GCA000012185_00065_gene;locus_tag=GCA000012185_00065;gene=dksA
contig_1	Pyrodigal	CDS	67202	67639	.	+	0	ID=GCA000012185_00065;Name=RNA polymerase-binding protein DksA;locus_tag=GCA000012185_00065;product=RNA polymerase-binding protein DksA;Dbxref=GO:0005737,GO:0006355,GO:0008270,GO:0010468,GO:0019899;gene=dksA;Parent=GCA000012185_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1734,COG:K,RefSeq:WP_011271805.1,SO:0001217,UniParc:UPI000053E00A,UniRef:UniRef100_A5UFM9,UniRef:UniRef50_P43758,UniRef:UniRef90_P43758
contig_1	Pyrodigal	gene	67887	69245	.	+	.	ID=GCA000012185_00066_gene;locus_tag=GCA000012185_00066;gene=pcnB
contig_1	Pyrodigal	CDS	67887	69245	.	+	0	ID=GCA000012185_00066;Name=Poly(A) polymerase I;locus_tag=GCA000012185_00066;product=Poly(A) polymerase I;Dbxref=GO:0003723,GO:0005524,GO:0006397,GO:0043633,GO:1990817;gene=pcnB;Parent=GCA000012185_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,KEGG:K00970,RefSeq:WP_011271806.1,SO:0001217,UniParc:UPI000053E00B,UniRef:UniRef100_Q4QPI1,UniRef:UniRef50_P44439,UniRef:UniRef90_P44439;ec_number=2.7.7.19
contig_1	Pyrodigal	gene	69254	69736	.	+	.	ID=GCA000012185_00067_gene;locus_tag=GCA000012185_00067;gene=folK
contig_1	Pyrodigal	CDS	69254	69736	.	+	0	ID=GCA000012185_00067;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA000012185_00067;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;Dbxref=GO:0003848,GO:0005524,GO:0009396,GO:0016301,GO:0046654,GO:0046656;gene=folK;Parent=GCA000012185_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0801,COG:H,RefSeq:WP_011271807.1,SO:0001217,UniParc:UPI000053E00C,UniRef:UniRef100_A0AAJ8WRU2,UniRef:UniRef50_P43777,UniRef:UniRef90_P43777;ec_number=2.7.6.3
contig_1	Pyrodigal	gene	69812	70288	.	+	.	ID=GCA000012185_00068_gene;locus_tag=GCA000012185_00068;gene=tsaE
contig_1	Pyrodigal	CDS	69812	70288	.	+	0	ID=GCA000012185_00068;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000012185_00068;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949,GO:0005524,GO:0005737,GO:0046872;gene=tsaE;Parent=GCA000012185_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,RefSeq:WP_005693857.1,SO:0001217,UniParc:UPI00000378C6,UniRef:UniRef100_P44492,UniRef:UniRef50_P44492,UniRef:UniRef90_P44492
contig_1	Pyrodigal	gene	70296	71594	.	+	.	ID=GCA000012185_00069_gene;locus_tag=GCA000012185_00069;gene=amiB
contig_1	Pyrodigal	CDS	70296	71594	.	+	0	ID=GCA000012185_00069;Name=putative N-acetylmuramoyl-L-alanine amidase AmiB;locus_tag=GCA000012185_00069;product=putative N-acetylmuramoyl-L-alanine amidase AmiB;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0043093,GO:0071555;gene=amiB;Parent=GCA000012185_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1388,COG:M,KEGG:K01448,RefSeq:WP_011271808.1,SO:0001217,UniParc:UPI00003CD9D7,UniRef:UniRef100_A0AAJ8WRD4,UniRef:UniRef50_P44493,UniRef:UniRef90_P44493;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	71595	73484	.	+	.	ID=GCA000012185_00070_gene;locus_tag=GCA000012185_00070;gene=mutL
contig_1	Pyrodigal	CDS	71595	73484	.	+	0	ID=GCA000012185_00070;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA000012185_00070;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300,GO:0140664;gene=mutL;Parent=GCA000012185_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_011271809.1,SO:0001217,UniParc:UPI000053E00D,UniRef:UniRef100_Q4QPH7,UniRef:UniRef50_A5UB71,UniRef:UniRef90_A5UB71
contig_1	Pyrodigal	gene	73492	74427	.	+	.	ID=GCA000012185_00071_gene;locus_tag=GCA000012185_00071;gene=miaA
contig_1	Pyrodigal	CDS	73492	74427	.	+	0	ID=GCA000012185_00071;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000012185_00071;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000012185_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_011271810.1,SO:0001217,UniParc:UPI00003CD7B4,UniRef:UniRef100_Q4QPH6,UniRef:UniRef50_Q9HUL9,UniRef:UniRef90_P44495;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	74433	77378	.	+	.	ID=GCA000012185_00072_gene;locus_tag=GCA000012185_00072;gene=glnE
contig_1	Pyrodigal	CDS	74433	77378	.	+	0	ID=GCA000012185_00072;Name=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;locus_tag=GCA000012185_00072;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;Dbxref=GO:0000287,GO:0000820,GO:0005524,GO:0005829,GO:0008882,GO:0047388;gene=glnE;Parent=GCA000012185_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1391,COG:O,KEGG:K00982,RefSeq:WP_011271811.1,SO:0001217,UniParc:UPI00003CD7B3,UniRef:UniRef100_A0AAJ8WC41,UniRef:UniRef50_P44419,UniRef:UniRef90_P44419;ec_number=2.7.7.89
contig_1	Pyrodigal	gene	77463	79139	.	-	.	ID=GCA000012185_00073_gene;locus_tag=GCA000012185_00073;gene=recN
contig_1	Pyrodigal	CDS	77463	79139	.	-	0	ID=GCA000012185_00073;Name=DNA repair protein RecN;locus_tag=GCA000012185_00073;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006302,GO:0006310,GO:0009432,GO:0016887,GO:0043590;gene=recN;Parent=GCA000012185_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_011271812.1,SO:0001217,UniParc:UPI000053E00E,UniRef:UniRef100_A0A2R3FV04,UniRef:UniRef50_P44496,UniRef:UniRef90_P44496
contig_1	Pyrodigal	gene	79251	80141	.	-	.	ID=GCA000012185_00074_gene;locus_tag=GCA000012185_00074;gene=nadK
contig_1	Pyrodigal	CDS	79251	80141	.	-	0	ID=GCA000012185_00074;Name=NAD(+) kinase;locus_tag=GCA000012185_00074;product=NAD(+) kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0019674,GO:0046872,GO:0051287;gene=nadK;Parent=GCA000012185_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_041174723.1,SO:0001217,UniParc:UPI00003CD7B1,UniRef:UniRef100_Q4QPH3,UniRef:UniRef50_P44497,UniRef:UniRef90_P44497;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	80241	80837	.	+	.	ID=GCA000012185_00075_gene;locus_tag=GCA000012185_00075;gene=grpE
contig_1	Pyrodigal	CDS	80241	80837	.	+	0	ID=GCA000012185_00075;Name=nucleotide exchange factor GrpE;locus_tag=GCA000012185_00075;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005829,GO:0006457,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000012185_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,KEGG:K03687,RefSeq:WP_136439101.1,SO:0001217,UniParc:UPI0005BEA037,UniRef:UniRef100_Q4QPH2,UniRef:UniRef50_P43732,UniRef:UniRef90_P43732
contig_1	Pyrodigal	gene	80850	81194	.	-	.	ID=GCA000012185_00076_gene;locus_tag=GCA000012185_00076;gene=mntA
contig_1	Pyrodigal	CDS	80850	81194	.	-	0	ID=GCA000012185_00076;Name=putative protein adenylyltransferase MntA;locus_tag=GCA000012185_00076;product=putative protein adenylyltransferase MntA;Dbxref=GO:0005524,GO:0016779,GO:0046872;gene=mntA;Parent=GCA000012185_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687534.1,SO:0001217,UniParc:UPI000053E011,UniRef:UniRef100_A0A158SYK6,UniRef:UniRef50_P43933,UniRef:UniRef90_P43933;ec_number=2.7.7.108
contig_1	Pyrodigal	gene	81187	81627	.	-	.	ID=GCA000012185_00077_gene;locus_tag=GCA000012185_00077;gene=hepT
contig_1	Pyrodigal	CDS	81187	81627	.	-	0	ID=GCA000012185_00077;Name=putative ribonuclease HepT;locus_tag=GCA000012185_00077;product=putative ribonuclease HepT;Dbxref=GO:0000166,GO:0004519;gene=hepT;Parent=GCA000012185_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271815.1,SO:0001217,UniParc:UPI000053E012,UniRef:UniRef100_A0A2S9S881,UniRef:UniRef50_P43934,UniRef:UniRef90_P43934;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	81908	84031	.	+	.	ID=GCA000012185_00078_gene;locus_tag=GCA000012185_00078;gene=nrdD
contig_1	Pyrodigal	CDS	81908	84031	.	+	0	ID=GCA000012185_00078;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA000012185_00078;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0005524,GO:0006260,GO:0008998,GO:0009265,GO:0031250,GO:0046872;gene=nrdD;Parent=GCA000012185_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,KEGG:K21636,RefSeq:WP_011271816.1,SO:0001217,UniParc:UPI000053E013,UniRef:UniRef100_Q4QPG9,UniRef:UniRef50_P28903,UniRef:UniRef90_P43752;ec_number=1.17.4.2
contig_1	Pyrodigal	gene	84150	85010	.	+	.	ID=GCA000012185_00079_gene;locus_tag=GCA000012185_00079;gene=tesB
contig_1	Pyrodigal	CDS	84150	85010	.	+	0	ID=GCA000012185_00079;Name=acyl-CoA thioesterase II;locus_tag=GCA000012185_00079;product=acyl-CoA thioesterase II;Dbxref=GO:0005829,GO:0006637,GO:0009062,GO:0047617;gene=tesB;Parent=GCA000012185_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1946,COG:I,RefSeq:WP_011271817.1,SO:0001217,UniParc:UPI000053E014,UniRef:UniRef100_A0AAJ8WC46,UniRef:UniRef50_P44498,UniRef:UniRef90_P44498;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	85171	86550	.	-	.	ID=GCA000012185_00080_gene;locus_tag=GCA000012185_00080;gene=cysS
contig_1	Pyrodigal	CDS	85171	86550	.	-	0	ID=GCA000012185_00080;Name=cysteine--tRNA ligase;locus_tag=GCA000012185_00080;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000012185_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_011271818.1,SO:0001217,UniParc:UPI000053E015,UniRef:UniRef100_Q4QPG7,UniRef:UniRef50_P43816,UniRef:UniRef90_P43816;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	86653	87162	.	+	.	ID=GCA000012185_00081_gene;locus_tag=GCA000012185_00081;gene=ppiB
contig_1	Pyrodigal	CDS	86653	87162	.	+	0	ID=GCA000012185_00081;Name=Peptidyl-prolyl cis-trans isomerase B;locus_tag=GCA000012185_00081;product=Peptidyl-prolyl cis-trans isomerase B;Dbxref=GO:0005737,GO:0006457,GO:0140839,GO:0140840;gene=ppiB;Parent=GCA000012185_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_011271819.1,SO:0001217,UniParc:UPI00003CD6C5,UniRef:UniRef100_A0A2S9S8A6,UniRef:UniRef50_P23869,UniRef:UniRef90_P44499;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	87166	87597	.	+	.	ID=GCA000012185_00082_gene;locus_tag=GCA000012185_00082;gene=yifN
contig_1	Pyrodigal	CDS	87166	87597	.	+	0	ID=GCA000012185_00082;Name=putative protein HI_0080;locus_tag=GCA000012185_00082;product=putative protein HI_0080;Dbxref=GO:0003677;gene=yifN;Parent=GCA000012185_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3692,COG:S,RefSeq:WP_011271820.1,SO:0001217,UniParc:UPI00003CD6C6,UniRef:UniRef100_A0A2R3FZL4,UniRef:UniRef50_P43936,UniRef:UniRef90_P43936
contig_1	Pyrodigal	gene	87739	88527	.	+	.	ID=GCA000012185_00083_gene;locus_tag=GCA000012185_00083;gene=tatD
contig_1	Pyrodigal	CDS	87739	88527	.	+	0	ID=GCA000012185_00083;Name=putative metal-dependent hydrolase HI_0081;locus_tag=GCA000012185_00083;product=putative metal-dependent hydrolase HI_0081;Dbxref=GO:0005829,GO:0016788,GO:0046872;gene=tatD;Parent=GCA000012185_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,RefSeq:WP_011271821.1,SO:0001217,UniParc:UPI000053E016,UniRef:UniRef100_A0AAJ8WBY2,UniRef:UniRef50_P44500,UniRef:UniRef90_P44500;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	88589	88846	.	+	.	ID=GCA000012185_00084_gene;locus_tag=GCA000012185_00084
contig_1	Pyrodigal	CDS	88589	88846	.	+	0	ID=GCA000012185_00084;Name=hypothetical protein;locus_tag=GCA000012185_00084;product=hypothetical protein;Parent=GCA000012185_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005672297.1,SO:0001217,UniParc:UPI000039A7C7,UniRef:UniRef100_A4P0Q2,UniRef:UniRef50_A0A0D0IIM4,UniRef:UniRef90_A0A0D0IIM4
contig_1	Pyrodigal	gene	88857	89132	.	+	.	ID=GCA000012185_00085_gene;locus_tag=GCA000012185_00085
contig_1	Pyrodigal	CDS	88857	89132	.	+	0	ID=GCA000012185_00085;Name=hypothetical protein;locus_tag=GCA000012185_00085;product=hypothetical protein;Parent=GCA000012185_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271822.1,SO:0001217,UniParc:UPI000053E017,UniRef:UniRef100_A0AAJ8WRD9,UniRef:UniRef50_A0A2X1PHE3,UniRef:UniRef90_A0AAJ8WRD9
contig_1	Pyrodigal	gene	89182	89505	.	-	.	ID=GCA000012185_00086_gene;locus_tag=GCA000012185_00086;gene=trxA
contig_1	Pyrodigal	CDS	89182	89505	.	-	0	ID=GCA000012185_00086;Name=thioredoxin;locus_tag=GCA000012185_00086;product=thioredoxin;Dbxref=GO:0005737,GO:0005829,GO:0015035,GO:0045454;gene=trxA;Parent=GCA000012185_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_005627940.1,SO:0001217,UniParc:UPI000039AD45,UniRef:UniRef100_A0A0M3G4M8,UniRef:UniRef50_P43785,UniRef:UniRef90_P43785
contig_1	Pyrodigal	gene	89625	90620	.	-	.	ID=GCA000012185_00087_gene;locus_tag=GCA000012185_00087;gene=ddh
contig_1	Pyrodigal	CDS	89625	90620	.	-	0	ID=GCA000012185_00087;Name=2-hydroxyacid dehydrogenase-like protein;locus_tag=GCA000012185_00087;product=2-hydroxyacid dehydrogenase-like protein;Dbxref=GO:0008720,GO:0051287;gene=ddh;Parent=GCA000012185_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_011271823.1,SO:0001217,UniParc:UPI000053E018,UniRef:UniRef100_A0AAJ8WC31,UniRef:UniRef50_P52643,UniRef:UniRef90_P44501;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	90633	91742	.	-	.	ID=GCA000012185_00088_gene;locus_tag=GCA000012185_00088;gene=metB
contig_1	Pyrodigal	CDS	90633	91742	.	-	0	ID=GCA000012185_00088;Name=methionine biosynthesis PLP-dependent protein;locus_tag=GCA000012185_00088;product=methionine biosynthesis PLP-dependent protein;Dbxref=GO:0003962,GO:0005737,GO:0009086,GO:0016846,GO:0019346,GO:0030170;gene=metB;Parent=GCA000012185_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_041174724.1,SO:0001217,UniParc:UPI00003CD6CA,UniRef:UniRef100_Q4QPF9,UniRef:UniRef50_P44502,UniRef:UniRef90_P44502;ec_number=2.5.1.48
contig_1	tRNAscan-SE	gene	91989	92064	.	+	.	ID=GCA000012185_00089_gene;locus_tag=GCA000012185_00089;gene=trnG
contig_1	tRNAscan-SE	tRNA	91989	92064	.	+	.	ID=GCA000012185_00089;Name=tRNA-Gly(gcc);locus_tag=GCA000012185_00089;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000012185_00089_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	92071	92144	.	+	.	ID=GCA000012185_00090_gene;locus_tag=GCA000012185_00090;gene=trnC
contig_1	tRNAscan-SE	tRNA	92071	92144	.	+	.	ID=GCA000012185_00090;Name=tRNA-Cys(gca);locus_tag=GCA000012185_00090;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000012185_00090_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	92172	92258	.	+	.	ID=GCA000012185_00091_gene;locus_tag=GCA000012185_00091;gene=trnL
contig_1	tRNAscan-SE	tRNA	92172	92258	.	+	.	ID=GCA000012185_00091;Name=tRNA-Leu(taa);locus_tag=GCA000012185_00091;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000012185_00091_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	92334	93170	.	+	.	ID=GCA000012185_00092_gene;locus_tag=GCA000012185_00092
contig_1	Pyrodigal	CDS	92334	93170	.	+	0	ID=GCA000012185_00092;Name=Atpase involved in chromosome partitioning;locus_tag=GCA000012185_00092;product=Atpase involved in chromosome partitioning;Parent=GCA000012185_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271825.1,SO:0001217,UniParc:UPI000039AD48,UniRef:UniRef100_A0A377IYY5,UniRef:UniRef50_A0A377IYY5,UniRef:UniRef90_A0A377IYY5
contig_1	Pyrodigal	gene	93172	94527	.	+	.	ID=GCA000012185_00093_gene;locus_tag=GCA000012185_00093;gene=dnaB
contig_1	Pyrodigal	CDS	93172	94527	.	+	0	ID=GCA000012185_00093;Name=replicative DNA helicase;locus_tag=GCA000012185_00093;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0005524,GO:0006260;gene=dnaB;Parent=GCA000012185_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02314,RefSeq:WP_011271826.1,SO:0001217,UniParc:UPI000039AD49,UniRef:UniRef100_A0A377IYZ7,UniRef:UniRef50_I3DDD5,UniRef:UniRef90_A0A377IYZ7;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	94520	96220	.	+	.	ID=GCA000012185_00094_gene;locus_tag=GCA000012185_00094
contig_1	Pyrodigal	CDS	94520	96220	.	+	0	ID=GCA000012185_00094;Name=ParB/Sulfiredoxin domain-containing protein;locus_tag=GCA000012185_00094;product=ParB/Sulfiredoxin domain-containing protein;Parent=GCA000012185_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03497,RefSeq:WP_011271827.1,SO:0001217,UniParc:UPI000039AD4A,UniRef:UniRef100_A0A377IYQ1,UniRef:UniRef50_Q0I4N5,UniRef:UniRef90_A4N4Y0
contig_1	Pyrodigal	gene	96220	96771	.	+	.	ID=GCA000012185_00095_gene;locus_tag=GCA000012185_00095
contig_1	Pyrodigal	CDS	96220	96771	.	+	0	ID=GCA000012185_00095;Name=DUF2857 domain-containing protein;locus_tag=GCA000012185_00095;product=DUF2857 domain-containing protein;Parent=GCA000012185_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653590.1,SO:0001217,UniParc:UPI000039AD4B,UniRef:UniRef100_A0A377J0I4,UniRef:UniRef50_Q7VMK6,UniRef:UniRef90_A0A1B0WPC7
contig_1	Pyrodigal	gene	96921	98144	.	+	.	ID=GCA000012185_00096_gene;locus_tag=GCA000012185_00096
contig_1	Pyrodigal	CDS	96921	98144	.	+	0	ID=GCA000012185_00096;Name=STY4528 family pathogenicity island replication protein;locus_tag=GCA000012185_00096;product=STY4528 family pathogenicity island replication protein;Parent=GCA000012185_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271828.1,SO:0001217,UniParc:UPI000039AD4C,UniRef:UniRef100_A0A377IZ48,UniRef:UniRef50_A0A9Q7E7U6,UniRef:UniRef90_A0A377IZ48
contig_1	Pyrodigal	gene	98161	98424	.	+	.	ID=GCA000012185_00097_gene;locus_tag=GCA000012185_00097
contig_1	Pyrodigal	CDS	98161	98424	.	+	0	ID=GCA000012185_00097;Name=hypothetical protein;locus_tag=GCA000012185_00097;product=hypothetical protein;Parent=GCA000012185_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_042599699.1,SO:0001217,UniParc:UPI00003CD6D1,UniRef:UniRef100_A0A377IZI7,UniRef:UniRef50_A0A377IZI7,UniRef:UniRef90_A0A377IZI7
contig_1	Pyrodigal	gene	98441	99196	.	+	.	ID=GCA000012185_00098_gene;locus_tag=GCA000012185_00098
contig_1	Pyrodigal	CDS	98441	99196	.	+	0	ID=GCA000012185_00098;Name=PFL_4669 family integrating conjugative element protein;locus_tag=GCA000012185_00098;product=PFL_4669 family integrating conjugative element protein;Parent=GCA000012185_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667775.1,SO:0001217,UniParc:UPI000039AD4E,UniRef:UniRef100_A0A377J0T6,UniRef:UniRef50_A7TUJ7,UniRef:UniRef90_A4N4X7
contig_1	Pyrodigal	gene	99211	99684	.	+	.	ID=GCA000012185_00099_gene;locus_tag=GCA000012185_00099
contig_1	Pyrodigal	CDS	99211	99684	.	+	0	ID=GCA000012185_00099;Name=DUF3158 domain-containing protein;locus_tag=GCA000012185_00099;product=DUF3158 domain-containing protein;Parent=GCA000012185_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653583.1,SO:0001217,UniParc:UPI00014FB5A7,UniRef:UniRef100_A0A377IYM5,UniRef:UniRef50_A0A1V3IF00,UniRef:UniRef90_A0A377IYM5
contig_1	Pyrodigal	gene	99930	100352	.	+	.	ID=GCA000012185_00100_gene;locus_tag=GCA000012185_00100
contig_1	Pyrodigal	CDS	99930	100352	.	+	0	ID=GCA000012185_00100;Name=Single-stranded DNA-binding protein;locus_tag=GCA000012185_00100;product=Single-stranded DNA-binding protein;Parent=GCA000012185_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687556.1,SO:0001217,UniParc:UPI000039AD50,UniRef:UniRef100_A0A377IYS1,UniRef:UniRef50_I3DDC4,UniRef:UniRef90_A0A377IYS1
contig_1	Pyrodigal	gene	100379	100897	.	+	.	ID=GCA000012185_00101_gene;locus_tag=GCA000012185_00101;gene=virB7
contig_1	Pyrodigal	CDS	100379	100897	.	+	0	ID=GCA000012185_00101;Name=Type IV secretion system putative lipoprotein virB7;locus_tag=GCA000012185_00101;product=Type IV secretion system putative lipoprotein virB7;gene=virB7;Parent=GCA000012185_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687559.1,SO:0001217,UniParc:UPI000039AD51,UniRef:UniRef100_A0AB36E902,UniRef:UniRef50_A0A2X1PJI6,UniRef:UniRef90_A0A2X1PJI6
contig_1	Pyrodigal	gene	101113	101670	.	-	.	ID=GCA000012185_00102_gene;locus_tag=GCA000012185_00102
contig_1	Pyrodigal	CDS	101113	101670	.	-	0	ID=GCA000012185_00102;Name=hypothetical protein;locus_tag=GCA000012185_00102;product=hypothetical protein;Parent=GCA000012185_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271830.1,SO:0001217,UniParc:UPI000053E01A,UniRef:UniRef100_A0A377IYX8,UniRef:UniRef50_A0A377IYX8,UniRef:UniRef90_A0A377IYX8,PFAM:PF22162.2
contig_1	Pyrodigal	gene	101761	103806	.	+	.	ID=GCA000012185_00103_gene;locus_tag=GCA000012185_00103
contig_1	Pyrodigal	CDS	101761	103806	.	+	0	ID=GCA000012185_00103;Name=DNA topoisomerase;locus_tag=GCA000012185_00103;product=DNA topoisomerase;Parent=GCA000012185_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03169,RefSeq:WP_014326561.1,SO:0001217,UniParc:UPI000039AD53,UniRef:UniRef100_A0A377IYY7,UniRef:UniRef50_A0A377IYY7,UniRef:UniRef90_A0A377IYY7;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	104691	105119	.	+	.	ID=GCA000012185_00104_gene;locus_tag=GCA000012185_00104
contig_1	Pyrodigal	CDS	104691	105119	.	+	0	ID=GCA000012185_00104;Name=STY4534 family ICE replication protein;locus_tag=GCA000012185_00104;product=STY4534 family ICE replication protein;Parent=GCA000012185_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271832.1,SO:0001217,UniParc:UPI000039AD54,UniRef:UniRef100_A0A377IYP1,UniRef:UniRef50_U1GZJ6,UniRef:UniRef90_A0A5B8RJB8
contig_1	Pyrodigal	gene	105234	105875	.	+	.	ID=GCA000012185_00105_gene;locus_tag=GCA000012185_00105
contig_1	Pyrodigal	CDS	105234	105875	.	+	0	ID=GCA000012185_00105;Name=DUF3560 domain-containing protein;locus_tag=GCA000012185_00105;product=DUF3560 domain-containing protein;Parent=GCA000012185_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271833.1,SO:0001217,UniParc:UPI000053E01D,UniRef:UniRef100_A0A377J0H4,UniRef:UniRef50_A0A1I1NSW5,UniRef:UniRef90_A0A9N8NA31
contig_1	Pyrodigal	gene	105910	106317	.	+	.	ID=GCA000012185_00106_gene;locus_tag=GCA000012185_00106
contig_1	Pyrodigal	CDS	105910	106317	.	+	0	ID=GCA000012185_00106;Name=Phage protein;locus_tag=GCA000012185_00106;product=Phage protein;Parent=GCA000012185_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271834.1,SO:0001217,UniParc:UPI000039AD56,UniRef:UniRef100_A0A377IZ38,UniRef:UniRef50_A0A377IZ38,UniRef:UniRef90_A0A377IZ38
contig_1	Pyrodigal	gene	106418	106888	.	+	.	ID=GCA000012185_00107_gene;locus_tag=GCA000012185_00107
contig_1	Pyrodigal	CDS	106418	106888	.	+	0	ID=GCA000012185_00107;Name=DNA repair protein;locus_tag=GCA000012185_00107;product=DNA repair protein;Parent=GCA000012185_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_011271835.1,SO:0001217,UniParc:UPI000039AD57,UniRef:UniRef100_A0A5C6GZI0,UniRef:UniRef50_A0A1B0WR25,UniRef:UniRef90_A0A1B0WR25
contig_1	Pyrodigal	gene	106981	107577	.	+	.	ID=GCA000012185_00108_gene;locus_tag=GCA000012185_00108
contig_1	Pyrodigal	CDS	106981	107577	.	+	0	ID=GCA000012185_00108;Name=hypothetical protein;locus_tag=GCA000012185_00108;product=hypothetical protein;Parent=GCA000012185_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271836.1,SO:0001217,UniParc:UPI000039AD58,UniRef:UniRef100_A0A377J0S9,UniRef:UniRef50_A0A377J0S9,UniRef:UniRef90_A0A377J0S9
contig_1	Pyrodigal	gene	107668	108399	.	+	.	ID=GCA000012185_00109_gene;locus_tag=GCA000012185_00109;gene=traX
contig_1	Pyrodigal	CDS	107668	108399	.	+	0	ID=GCA000012185_00109;Name=Conjugal transfer protein TraX;locus_tag=GCA000012185_00109;product=Conjugal transfer protein TraX;gene=traX;Parent=GCA000012185_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_020910031.1,SO:0001217,UniParc:UPI000039AD59,UniRef:UniRef100_A0A5B8RM30,UniRef:UniRef50_A0A1V3JSG4,UniRef:UniRef90_A0A369Z6X9
contig_1	Pyrodigal	gene	108498	109127	.	+	.	ID=GCA000012185_00110_gene;locus_tag=GCA000012185_00110;gene=virB7
contig_1	Pyrodigal	CDS	108498	109127	.	+	0	ID=GCA000012185_00110;Name=Type IV secretion system putative lipoprotein virB7;locus_tag=GCA000012185_00110;product=Type IV secretion system putative lipoprotein virB7;gene=virB7;Parent=GCA000012185_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271838.1,SO:0001217,UniParc:UPI000039AD5A,UniRef:UniRef100_A0A5C6GZW1,UniRef:UniRef50_A0A377IYR1,UniRef:UniRef90_A0A377IYR1
contig_1	Pyrodigal	gene	109131	109871	.	+	.	ID=GCA000012185_00111_gene;locus_tag=GCA000012185_00111
contig_1	Pyrodigal	CDS	109131	109871	.	+	0	ID=GCA000012185_00111;Name=Conj_TIGR03759: integrating conjugative element protein;locus_tag=GCA000012185_00111;product=Conj_TIGR03759: integrating conjugative element protein;Parent=GCA000012185_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271839.1,SO:0001217,UniParc:UPI000053E01F,UniRef:UniRef100_A0A5C6GZ40,UniRef:UniRef50_W0R2U5,UniRef:UniRef90_A0A5C6GZ40
contig_1	Pyrodigal	gene	109850	110608	.	+	.	ID=GCA000012185_00112_gene;locus_tag=GCA000012185_00112
contig_1	Pyrodigal	CDS	109850	110608	.	+	0	ID=GCA000012185_00112;Name=Transglycosylase SLT domain-containing protein;locus_tag=GCA000012185_00112;product=Transglycosylase SLT domain-containing protein;Parent=GCA000012185_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271840.1,SO:0001217,UniParc:UPI000039AD5C,UniRef:UniRef100_A0A377IYW6,UniRef:UniRef50_A0A4S2Q3H1,UniRef:UniRef90_A0A369Z679
contig_1	Pyrodigal	gene	110624	111130	.	+	.	ID=GCA000012185_00113_gene;locus_tag=GCA000012185_00113
contig_1	Pyrodigal	CDS	110624	111130	.	+	0	ID=GCA000012185_00113;Name=Integrating conjugative element protein;locus_tag=GCA000012185_00113;product=Integrating conjugative element protein;Parent=GCA000012185_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271841.1,SO:0001217,UniParc:UPI000039AD5D,UniRef:UniRef100_A0A377IYX6,UniRef:UniRef50_Q6J5E5,UniRef:UniRef90_Q6J5E5
contig_1	Pyrodigal	gene	111127	113376	.	+	.	ID=GCA000012185_00114_gene;locus_tag=GCA000012185_00114;gene=traD
contig_1	Pyrodigal	CDS	111127	113376	.	+	0	ID=GCA000012185_00114;Name=type IV conjugative transfer system coupling protein TraD;locus_tag=GCA000012185_00114;product=type IV conjugative transfer system coupling protein TraD;gene=traD;Parent=GCA000012185_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12071,RefSeq:WP_011271842.1,SO:0001217,UniParc:UPI000039AD5E,UniRef:UniRef100_A0A5C6GZ28,UniRef:UniRef50_A0A5B8SQX9,UniRef:UniRef90_A0A9N8NA81
contig_1	Pyrodigal	gene	113360	113695	.	+	.	ID=GCA000012185_00115_gene;locus_tag=GCA000012185_00115
contig_1	Pyrodigal	CDS	113360	113695	.	+	0	ID=GCA000012185_00115;Name=Hemophilus-specific protein;locus_tag=GCA000012185_00115;product=Hemophilus-specific protein;Parent=GCA000012185_00115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687581.1,SO:0001217,UniParc:UPI0001A3F73F,UniRef:UniRef100_A0A377J0G4,UniRef:UniRef50_A0A377J0G4,UniRef:UniRef90_A0A377J0G4
contig_1	Pyrodigal	gene	113695	114381	.	+	.	ID=GCA000012185_00116_gene;locus_tag=GCA000012185_00116
contig_1	Pyrodigal	CDS	113695	114381	.	+	0	ID=GCA000012185_00116;Name=Integrating conjugative element membrane protein%2C PFL_4697 family;locus_tag=GCA000012185_00116;product=Integrating conjugative element membrane protein%2C PFL_4697 family;Parent=GCA000012185_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687582.1,SO:0001217,UniParc:UPI000039AD60,UniRef:UniRef100_A0AAW3ZZI2,UniRef:UniRef50_Q7VMN3,UniRef:UniRef90_A0A377IZ32
contig_1	Pyrodigal	gene	114542	114862	.	+	.	ID=GCA000012185_00117_gene;locus_tag=GCA000012185_00117
contig_1	Pyrodigal	CDS	114542	114862	.	+	0	ID=GCA000012185_00117;Name=RAQPRD family integrative conjugative element protein;locus_tag=GCA000012185_00117;product=RAQPRD family integrative conjugative element protein;Parent=GCA000012185_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687583.1,SO:0001217,UniParc:UPI000045EA39,UniRef:UniRef100_A0A2S9S8B4,UniRef:UniRef50_A0A0A2ZZH9,UniRef:UniRef90_A0A369Z1Z2
contig_1	Pyrodigal	gene	114866	115111	.	+	.	ID=GCA000012185_00118_gene;locus_tag=GCA000012185_00118
contig_1	Pyrodigal	CDS	114866	115111	.	+	0	ID=GCA000012185_00118;Name=DUF3262 domain-containing protein;locus_tag=GCA000012185_00118;product=DUF3262 domain-containing protein;Parent=GCA000012185_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687584.1,SO:0001217,UniParc:UPI000039AD62,UniRef:UniRef100_A0A1B8T3U5,UniRef:UniRef50_A0A1V3KWH3,UniRef:UniRef90_A4N4V6
contig_1	Pyrodigal	gene	115131	115532	.	+	.	ID=GCA000012185_00119_gene;locus_tag=GCA000012185_00119
contig_1	Pyrodigal	CDS	115131	115532	.	+	0	ID=GCA000012185_00119;Name=Integrating conjugative element membrane protein%2C PFL_4702 family;locus_tag=GCA000012185_00119;product=Integrating conjugative element membrane protein%2C PFL_4702 family;Parent=GCA000012185_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687585.1,SO:0001217,UniParc:UPI000039AD63,UniRef:UniRef100_A0A1B8T422,UniRef:UniRef50_Q7VMN5,UniRef:UniRef90_A0A377IYK9
contig_1	Pyrodigal	gene	115552	115923	.	+	.	ID=GCA000012185_00120_gene;locus_tag=GCA000012185_00120
contig_1	Pyrodigal	CDS	115552	115923	.	+	0	ID=GCA000012185_00120;Name=Conjugative transfer region protein;locus_tag=GCA000012185_00120;product=Conjugative transfer region protein;Parent=GCA000012185_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271844.1,SO:0001217,UniParc:UPI000039AD64,UniRef:UniRef100_A0A377IYQ5,UniRef:UniRef50_Q7VMN6,UniRef:UniRef90_A0A377IYQ5
contig_1	Pyrodigal	gene	115935	116579	.	+	.	ID=GCA000012185_00121_gene;locus_tag=GCA000012185_00121
contig_1	Pyrodigal	CDS	115935	116579	.	+	0	ID=GCA000012185_00121;Name=PFL_4703 family integrating conjugative element protein;locus_tag=GCA000012185_00121;product=PFL_4703 family integrating conjugative element protein;Parent=GCA000012185_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271845.1,SO:0001217,UniParc:UPI000039AD65,UniRef:UniRef100_A0A5C6GZ30,UniRef:UniRef50_Q7VMN7,UniRef:UniRef90_A0A377IYM0
contig_1	Pyrodigal	gene	116579	117448	.	+	.	ID=GCA000012185_00122_gene;locus_tag=GCA000012185_00122
contig_1	Pyrodigal	CDS	116579	117448	.	+	0	ID=GCA000012185_00122;Name=Integrating conjugative element protein%2C PFL_4704 family;locus_tag=GCA000012185_00122;product=Integrating conjugative element protein%2C PFL_4704 family;Parent=GCA000012185_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271846.1,SO:0001217,UniParc:UPI000039AD66,UniRef:UniRef100_A0A5C6GZF0,UniRef:UniRef50_Q7VMN8,UniRef:UniRef90_A0A2X1RNF7
contig_1	Pyrodigal	gene	117459	118859	.	+	.	ID=GCA000012185_00123_gene;locus_tag=GCA000012185_00123
contig_1	Pyrodigal	CDS	117459	118859	.	+	0	ID=GCA000012185_00123;Name=Conj_TIGR03752: integrating conjugative element protein;locus_tag=GCA000012185_00123;product=Conj_TIGR03752: integrating conjugative element protein;Parent=GCA000012185_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271847.1,SO:0001217,UniParc:UPI000039AD67,UniRef:UniRef100_A0A5C6GZ50,UniRef:UniRef50_Q7VMN9,UniRef:UniRef90_A0A5C6GZ50
contig_1	Pyrodigal	gene	118869	119276	.	+	.	ID=GCA000012185_00124_gene;locus_tag=GCA000012185_00124
contig_1	Pyrodigal	CDS	118869	119276	.	+	0	ID=GCA000012185_00124;Name=Conjugative transfer region lipoprotein;locus_tag=GCA000012185_00124;product=Conjugative transfer region lipoprotein;Parent=GCA000012185_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271848.1,SO:0001217,UniParc:UPI000039AD68,UniRef:UniRef100_A0A377IYM6,UniRef:UniRef50_A0A1V3J6D6,UniRef:UniRef90_A0A1B0WTP9
contig_1	Pyrodigal	gene	119292	122162	.	+	.	ID=GCA000012185_00125_gene;locus_tag=GCA000012185_00125
contig_1	Pyrodigal	CDS	119292	122162	.	+	0	ID=GCA000012185_00125;Name=conjugative transfer ATPase;locus_tag=GCA000012185_00125;product=conjugative transfer ATPase;Dbxref=GO:0005524;Parent=GCA000012185_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271849.1,SO:0001217,UniParc:UPI000039AD69,UniRef:UniRef100_A0A377J0F8,UniRef:UniRef50_A0A380U2T4,UniRef:UniRef90_A4N4U7
contig_1	Pyrodigal	gene	122134	122577	.	+	.	ID=GCA000012185_00126_gene;locus_tag=GCA000012185_00126
contig_1	Pyrodigal	CDS	122134	122577	.	+	0	ID=GCA000012185_00126;Name=DUF5655 domain-containing protein;locus_tag=GCA000012185_00126;product=DUF5655 domain-containing protein;Parent=GCA000012185_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687593.1,SO:0001217,UniParc:UPI0001A3F744,UniRef:UniRef100_A0A377IZ23,UniRef:UniRef50_A0A377IZ23,UniRef:UniRef90_A0A377IZ23
contig_1	Pyrodigal	gene	122587	122910	.	+	.	ID=GCA000012185_00127_gene;locus_tag=GCA000012185_00127
contig_1	Pyrodigal	CDS	122587	122910	.	+	0	ID=GCA000012185_00127;Name=Hemophilus-specific protein;locus_tag=GCA000012185_00127;product=Hemophilus-specific protein;Parent=GCA000012185_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271851.1,SO:0001217,UniParc:UPI000039AD6B,UniRef:UniRef100_A0A377IZG3,UniRef:UniRef50_A0A1V3IET7,UniRef:UniRef90_A0A377IZG3
contig_1	Pyrodigal	gene	122919	124412	.	+	.	ID=GCA000012185_00128_gene;locus_tag=GCA000012185_00128;gene=traG
contig_1	Pyrodigal	CDS	122919	124412	.	+	0	ID=GCA000012185_00128;Name=TraG N-terminal Proteobacteria domain-containing protein;locus_tag=GCA000012185_00128;product=TraG N-terminal Proteobacteria domain-containing protein;gene=traG;Parent=GCA000012185_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271852.1,SO:0001217,UniParc:UPI000039AD6C,UniRef:UniRef100_A0A377J0R0,UniRef:UniRef50_A0AAX3ISN8,UniRef:UniRef90_A0A1B0WPY2
contig_1	Pyrodigal	gene	124468	124797	.	-	.	ID=GCA000012185_00129_gene;locus_tag=GCA000012185_00129
contig_1	Pyrodigal	CDS	124468	124797	.	-	0	ID=GCA000012185_00129;Name=hypothetical protein;locus_tag=GCA000012185_00129;product=hypothetical protein;Parent=GCA000012185_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667844.1,SO:0001217,UniParc:UPI000039AD6D,UniRef:UniRef100_A0A377IYK1,UniRef:UniRef50_A0A377IYK1,UniRef:UniRef90_A0A377IYK1
contig_1	Pyrodigal	gene	124955	128089	.	-	.	ID=GCA000012185_00130_gene;locus_tag=GCA000012185_00130;gene=tnpA
contig_1	Pyrodigal	CDS	124955	128089	.	-	0	ID=GCA000012185_00130;Name=Tn3-like element Tn3 family transposase;locus_tag=GCA000012185_00130;product=Tn3-like element Tn3 family transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnpA;Parent=GCA000012185_00130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_032495017,COG:COG4644,COG:X,SO:0001217,UniParc:UPI0001DDD872,UniRef:UniRef100_G1CCP5,UniRef:UniRef50_P03008,UniRef:UniRef90_P03008
contig_1	Pyrodigal	gene	128124	128681	.	+	.	ID=GCA000012185_00131_gene;locus_tag=GCA000012185_00131;gene=tnpR
contig_1	Pyrodigal	CDS	128124	128681	.	+	0	ID=GCA000012185_00131;Name=Transposon Tn1331 resolvase;locus_tag=GCA000012185_00131;product=Transposon Tn1331 resolvase;Dbxref=GO:0000150,GO:0003677,GO:0015074;gene=tnpR;Parent=GCA000012185_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K14060,RefSeq:WP_001235713.1,SO:0001217,UniParc:UPI00001A3763,UniRef:UniRef100_D9Z4Z5,UniRef:UniRef50_P21424,UniRef:UniRef90_P21424
contig_1	Pyrodigal	gene	128729	129589	.	+	.	ID=GCA000012185_00132_gene;locus_tag=GCA000012185_00132;gene=blaTEM-1
contig_1	Pyrodigal	CDS	128729	129589	.	+	0	ID=GCA000012185_00132;Name=broad-spectrum class A beta-lactamase TEM-1;locus_tag=GCA000012185_00132;product=broad-spectrum class A beta-lactamase TEM-1;Dbxref=GO:0008800,GO:0030655,GO:0046677;gene=blaTEM-1;Parent=GCA000012185_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2367,COG:V,KEGG:K18698,NCBIProtein:WP_000027057.1,RefSeq:WP_000027057.1,SO:0001217,UniParc:UPI00000000E4,UniRef:UniRef100_P62593,UniRef:UniRef50_P62593,UniRef:UniRef90_P62593;ec_number=3.5.2.6
contig_1	Pyrodigal	gene	129813	129992	.	+	.	ID=GCA000012185_00133_gene;locus_tag=GCA000012185_00133
contig_1	Pyrodigal	CDS	129813	129992	.	+	0	ID=GCA000012185_00133;Name=hypothetical protein;locus_tag=GCA000012185_00133;product=hypothetical protein;Parent=GCA000012185_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667851.1,SO:0001217,UniParc:UPI000039AD6E,UniRef:UniRef100_A0A377IYW4,UniRef:UniRef50_A0A377IYW4,UniRef:UniRef90_A0A377IYW4
contig_1	Pyrodigal	gene	130037	130444	.	-	.	ID=GCA000012185_00134_gene;locus_tag=GCA000012185_00134
contig_1	Pyrodigal	CDS	130037	130444	.	-	0	ID=GCA000012185_00134;Name=C-type lysozyme inhibitor domain-containing protein;locus_tag=GCA000012185_00134;product=C-type lysozyme inhibitor domain-containing protein;Parent=GCA000012185_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667853.1,SO:0001217,UniParc:UPI000039AD6F,UniRef:UniRef100_A0A377IYL7,UniRef:UniRef50_A0A1V3JSP2,UniRef:UniRef90_A0A377IYL7
contig_1	Pyrodigal	gene	130460	132460	.	-	.	ID=GCA000012185_00135_gene;locus_tag=GCA000012185_00135
contig_1	Pyrodigal	CDS	130460	132460	.	-	0	ID=GCA000012185_00135;Name=integrating conjugative element protein;locus_tag=GCA000012185_00135;product=integrating conjugative element protein;Parent=GCA000012185_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687597.1,SO:0001217,UniParc:UPI000039AD70,UniRef:UniRef100_A0A377J0F0,UniRef:UniRef50_A0A1V3J6G1,UniRef:UniRef90_A0A377J0F0
contig_1	Pyrodigal	gene	132475	133416	.	-	.	ID=GCA000012185_00136_gene;locus_tag=GCA000012185_00136
contig_1	Pyrodigal	CDS	132475	133416	.	-	0	ID=GCA000012185_00136;Name=Exported protein;locus_tag=GCA000012185_00136;product=Exported protein;Parent=GCA000012185_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271853.1,SO:0001217,UniParc:UPI00003CD8EE,UniRef:UniRef100_A0A377IZ14,UniRef:UniRef50_A7TUJ3,UniRef:UniRef90_A0A377IZ14
contig_1	Pyrodigal	gene	133413	133850	.	-	.	ID=GCA000012185_00137_gene;locus_tag=GCA000012185_00137
contig_1	Pyrodigal	CDS	133413	133850	.	-	0	ID=GCA000012185_00137;Name=Integrating conjugative element protein%2C PFL_4709 family;locus_tag=GCA000012185_00137;product=Integrating conjugative element protein%2C PFL_4709 family;Parent=GCA000012185_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687600.1,SO:0001217,UniParc:UPI00004036CC,UniRef:UniRef100_A0A377IZF4,UniRef:UniRef50_A0A377IZF4,UniRef:UniRef90_A0A377IZF4
contig_1	Pyrodigal	gene	134231	134587	.	+	.	ID=GCA000012185_00138_gene;locus_tag=GCA000012185_00138
contig_1	Pyrodigal	CDS	134231	134587	.	+	0	ID=GCA000012185_00138;Name=hypothetical protein;locus_tag=GCA000012185_00138;product=hypothetical protein;Parent=GCA000012185_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653504.1,SO:0001217,UniParc:UPI00014FB48F,UniRef:UniRef100_A0A377J0Q1,UniRef:UniRef50_Q7VMQ4,UniRef:UniRef90_A0A377J0Q1
contig_1	Pyrodigal	gene	134672	134905	.	+	.	ID=GCA000012185_00139_gene;locus_tag=GCA000012185_00139
contig_1	Pyrodigal	CDS	134672	134905	.	+	0	ID=GCA000012185_00139;Name=Hemophilus-specific protein;locus_tag=GCA000012185_00139;product=Hemophilus-specific protein;Parent=GCA000012185_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653503.1,SO:0001217,UniParc:UPI000039AD74,UniRef:UniRef100_A0A377IYJ6,UniRef:UniRef50_A0A1V3IES7,UniRef:UniRef90_A0A377IYJ6
contig_1	Pyrodigal	gene	134908	135156	.	+	.	ID=GCA000012185_00140_gene;locus_tag=GCA000012185_00140
contig_1	Pyrodigal	CDS	134908	135156	.	+	0	ID=GCA000012185_00140;Name=hypothetical protein;locus_tag=GCA000012185_00140;product=hypothetical protein;Parent=GCA000012185_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687602.1,SO:0001217,UniParc:UPI000039AD75,UniRef:UniRef100_A0A377IYN8,UniRef:UniRef50_A0A377IYN8,UniRef:UniRef90_A0A377IYN8
contig_1	Pyrodigal	gene	135160	135318	.	+	.	ID=GCA000012185_00141_gene;locus_tag=GCA000012185_00141
contig_1	Pyrodigal	CDS	135160	135318	.	+	0	ID=GCA000012185_00141;Name=hypothetical protein;locus_tag=GCA000012185_00141;product=hypothetical protein;Parent=GCA000012185_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687605.1,SO:0001217,UniParc:UPI000053E025,UniRef:UniRef100_A0A377IYK2,UniRef:UniRef50_A0A377IYK2,UniRef:UniRef90_A0A377IYK2
contig_1	Pyrodigal	gene	135449	136402	.	+	.	ID=GCA000012185_00142_gene;locus_tag=GCA000012185_00142
contig_1	Pyrodigal	CDS	135449	136402	.	+	0	ID=GCA000012185_00142;Name=Antirestriction protein;locus_tag=GCA000012185_00142;product=Antirestriction protein;Parent=GCA000012185_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271856.1,SO:0001217,UniParc:UPI000053E026,UniRef:UniRef100_A0A377IYT5,UniRef:UniRef50_A0A377IYT5,UniRef:UniRef90_A0A377IYT5
contig_1	Pyrodigal	gene	136506	137267	.	+	.	ID=GCA000012185_00143_gene;locus_tag=GCA000012185_00143
contig_1	Pyrodigal	CDS	136506	137267	.	+	0	ID=GCA000012185_00143;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000012185_00143;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000012185_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271857.1,SO:0001217,UniParc:UPI00003CDD03,UniRef:UniRef100_A0A377IYV4,UniRef:UniRef50_A0A377IYV4,UniRef:UniRef90_A0A377IYV4
contig_1	Pyrodigal	gene	137493	138059	.	+	.	ID=GCA000012185_00144_gene;locus_tag=GCA000012185_00144
contig_1	Pyrodigal	CDS	137493	138059	.	+	0	ID=GCA000012185_00144;Name=hypothetical protein;locus_tag=GCA000012185_00144;product=hypothetical protein;Parent=GCA000012185_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271858.1,SO:0001217,UniParc:UPI000053E027,UniRef:UniRef100_A0A377IYK7,UniRef:UniRef50_A0A377IYK7,UniRef:UniRef90_A0A377IYK7
contig_1	Pyrodigal	gene	138099	138473	.	+	.	ID=GCA000012185_00145_gene;locus_tag=GCA000012185_00145
contig_1	Pyrodigal	CDS	138099	138473	.	+	0	ID=GCA000012185_00145;Name=hypothetical protein;locus_tag=GCA000012185_00145;product=hypothetical protein;Parent=GCA000012185_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271859.1,SO:0001217,UniParc:UPI000053E028,UniRef:UniRef100_A0A377J0E0,UniRef:UniRef50_W0QE07,UniRef:UniRef90_A0A377J0E0
contig_1	Pyrodigal	gene	138463	139140	.	+	.	ID=GCA000012185_00146_gene;locus_tag=GCA000012185_00146
contig_1	Pyrodigal	CDS	138463	139140	.	+	0	ID=GCA000012185_00146;Name=hypothetical protein;locus_tag=GCA000012185_00146;product=hypothetical protein;Parent=GCA000012185_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271860.1,SO:0001217,UniParc:UPI000053E029,UniRef:UniRef100_Q4QPA6,UniRef:UniRef50_Q9F272,UniRef:UniRef90_Q9F272
contig_1	Pyrodigal	gene	139118	139735	.	+	.	ID=GCA000012185_00147_gene;locus_tag=GCA000012185_00147
contig_1	Pyrodigal	CDS	139118	139735	.	+	0	ID=GCA000012185_00147;Name=hypothetical protein;locus_tag=GCA000012185_00147;product=hypothetical protein;Parent=GCA000012185_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271861.1,SO:0001217,UniParc:UPI00003CDC51,UniRef:UniRef100_A0A377IZF0,UniRef:UniRef50_Q9F271,UniRef:UniRef90_Q9F271
contig_1	Pyrodigal	gene	139725	139922	.	+	.	ID=GCA000012185_00148_gene;locus_tag=GCA000012185_00148
contig_1	Pyrodigal	CDS	139725	139922	.	+	0	ID=GCA000012185_00148;Name=Putative copG-like DNA-binding protein;locus_tag=GCA000012185_00148;product=Putative copG-like DNA-binding protein;Parent=GCA000012185_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00059B23E0,UniRef:UniRef100_A0A377J0P2,UniRef:UniRef50_G4A6K4,UniRef:UniRef90_Q9F270
contig_1	Pyrodigal	gene	139999	140598	.	-	.	ID=GCA000012185_00149_gene;locus_tag=GCA000012185_00149
contig_1	Pyrodigal	CDS	139999	140598	.	-	0	ID=GCA000012185_00149;Name=E14 prophage site-specific DNA recombinase;locus_tag=GCA000012185_00149;product=E14 prophage site-specific DNA recombinase;Parent=GCA000012185_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14060,RefSeq:WP_011271862.1,SO:0001217,UniParc:UPI000053E02A,UniRef:UniRef100_A0A377IYI7,UniRef:UniRef50_A0A448PZD2,UniRef:UniRef90_A0A377IYI7
contig_1	Pyrodigal	gene	140613	140804	.	-	.	ID=GCA000012185_00150_gene;locus_tag=GCA000012185_00150
contig_1	Pyrodigal	CDS	140613	140804	.	-	0	ID=GCA000012185_00150;Name=hypothetical protein;locus_tag=GCA000012185_00150;product=hypothetical protein;Parent=GCA000012185_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653495.1,SO:0001217,UniParc:UPI000039AD7B,UniRef:UniRef100_A0A377IYM2,UniRef:UniRef50_A0A377IYM2,UniRef:UniRef90_A0A377IYM2
contig_1	Pyrodigal	gene	140819	141106	.	-	.	ID=GCA000012185_00151_gene;locus_tag=GCA000012185_00151
contig_1	Pyrodigal	CDS	140819	141106	.	-	0	ID=GCA000012185_00151;Name=hypothetical protein;locus_tag=GCA000012185_00151;product=hypothetical protein;Parent=GCA000012185_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015701375.1,SO:0001217,UniParc:UPI0001DDD874,UniRef:UniRef100_A0A377IYI6,UniRef:UniRef50_A0A377IYI6,UniRef:UniRef90_A0A377IYI6
contig_1	Pyrodigal	gene	141128	141250	.	-	.	ID=GCA000012185_00152_gene;locus_tag=GCA000012185_00152
contig_1	Pyrodigal	CDS	141128	141250	.	-	0	ID=GCA000012185_00152;Name=hypothetical protein;locus_tag=GCA000012185_00152;product=hypothetical protein;Parent=GCA000012185_00152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000A90BC76,UniRef:UniRef100_A0A377IYR5,UniRef:UniRef50_A0A377IYR5,UniRef:UniRef90_A0A377IYR5
contig_1	Pyrodigal	gene	141273	141509	.	-	.	ID=GCA000012185_00153_gene;locus_tag=GCA000012185_00153
contig_1	Pyrodigal	CDS	141273	141509	.	-	0	ID=GCA000012185_00153;Name=hypothetical protein;locus_tag=GCA000012185_00153;product=hypothetical protein;Parent=GCA000012185_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015701376.1,SO:0001217,UniParc:UPI00003CD75D,UniRef:UniRef100_A0A377IYU4,UniRef:UniRef50_A0A1A7P333,UniRef:UniRef90_A0A377IYU4
contig_1	Pyrodigal	gene	141531	141818	.	-	.	ID=GCA000012185_00154_gene;locus_tag=GCA000012185_00154
contig_1	Pyrodigal	CDS	141531	141818	.	-	0	ID=GCA000012185_00154;Name=hypothetical protein;locus_tag=GCA000012185_00154;product=hypothetical protein;Parent=GCA000012185_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015701377.1,SO:0001217,UniParc:UPI00003CD75C,UniRef:UniRef100_A0A377IYJ2,UniRef:UniRef50_A0A377IYJ2,UniRef:UniRef90_A0A377IYJ2
contig_1	Pyrodigal	gene	142196	142474	.	+	.	ID=GCA000012185_00155_gene;locus_tag=GCA000012185_00155
contig_1	Pyrodigal	CDS	142196	142474	.	+	0	ID=GCA000012185_00155;Name=hypothetical protein;locus_tag=GCA000012185_00155;product=hypothetical protein;Parent=GCA000012185_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174726.1,SO:0001217,UniParc:UPI00003CD75B,UniRef:UniRef100_UPI00003CD75B,UniRef:UniRef50_A0A1V3L5B4,UniRef:UniRef90_UPI001CC53DCC
contig_1	Pyrodigal	gene	142718	143431	.	+	.	ID=GCA000012185_00156_gene;locus_tag=GCA000012185_00156
contig_1	Pyrodigal	CDS	142718	143431	.	+	0	ID=GCA000012185_00156;Name=Abi-like protein;locus_tag=GCA000012185_00156;product=Abi-like protein;Parent=GCA000012185_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271864.1,SO:0001217,UniParc:UPI000053E02C,UniRef:UniRef100_Q4QPA1,UniRef:UniRef50_Q4QPA1,UniRef:UniRef90_Q4QPA1
contig_1	Pyrodigal	gene	144151	145404	.	+	.	ID=GCA000012185_00157_gene;locus_tag=GCA000012185_00157
contig_1	Pyrodigal	CDS	144151	145404	.	+	0	ID=GCA000012185_00157;Name=hypothetical protein;locus_tag=GCA000012185_00157;product=hypothetical protein;Parent=GCA000012185_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271865.1,SO:0001217,UniParc:UPI000053E02D,UniRef:UniRef100_Q4QPA0,UniRef:UniRef50_Q4QPA0,UniRef:UniRef90_Q4QPA0
contig_1	Pyrodigal	gene	145547	147463	.	+	.	ID=GCA000012185_00158_gene;locus_tag=GCA000012185_00158;gene=mobH
contig_1	Pyrodigal	CDS	145547	147463	.	+	0	ID=GCA000012185_00158;Name=MobH family relaxase;locus_tag=GCA000012185_00158;product=MobH family relaxase;gene=mobH;Parent=GCA000012185_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12070,SO:0001217,UniParc:UPI000053E02E,UniRef:UniRef100_Q4QP99,UniRef:UniRef50_A7TUI7,UniRef:UniRef90_Q4QP99
contig_1	Pyrodigal	gene	147881	148366	.	+	.	ID=GCA000012185_00159_gene;locus_tag=GCA000012185_00159
contig_1	Pyrodigal	CDS	147881	148366	.	+	0	ID=GCA000012185_00159;Name=Site-specific recombinase;locus_tag=GCA000012185_00159;product=Site-specific recombinase;Parent=GCA000012185_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000D4E59B1,UniRef:UniRef100_A0A377IYL3,UniRef:UniRef50_Q4QP98,UniRef:UniRef90_Q4QP98
contig_1	tRNAscan-SE	gene	148576	148665	.	+	.	ID=GCA000012185_00160_gene;locus_tag=GCA000012185_00160;gene=trnL
contig_1	tRNAscan-SE	tRNA	148576	148665	.	+	.	ID=GCA000012185_00160;Name=tRNA-Leu(taa);locus_tag=GCA000012185_00160;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000012185_00160_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	148717	148792	.	+	.	ID=GCA000012185_00161_gene;locus_tag=GCA000012185_00161;gene=trnK
contig_1	tRNAscan-SE	tRNA	148717	148792	.	+	.	ID=GCA000012185_00161;Name=tRNA-Lys(ttt);locus_tag=GCA000012185_00161;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000012185_00161_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	149016	150293	.	-	.	ID=GCA000012185_00162_gene;locus_tag=GCA000012185_00162;gene=thrC
contig_1	Pyrodigal	CDS	149016	150293	.	-	0	ID=GCA000012185_00162;Name=threonine synthase;locus_tag=GCA000012185_00162;product=threonine synthase;Dbxref=GO:0004795,GO:0009088,GO:0030170;gene=thrC;Parent=GCA000012185_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0498,COG:E,KEGG:K01733,RefSeq:WP_011271868.1,SO:0001217,UniParc:UPI00003CD757,UniRef:UniRef100_A0A2R3FZR3,UniRef:UniRef50_P44503,UniRef:UniRef90_P44503;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	150336	151280	.	-	.	ID=GCA000012185_00163_gene;locus_tag=GCA000012185_00163;gene=thrB
contig_1	Pyrodigal	CDS	150336	151280	.	-	0	ID=GCA000012185_00163;Name=homoserine kinase;locus_tag=GCA000012185_00163;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000012185_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,KEGG:K00872,RefSeq:WP_011271869.1,SO:0001217,UniParc:UPI00003CD756,UniRef:UniRef100_Q4QP96,UniRef:UniRef50_P44504,UniRef:UniRef90_P44504;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	151293	153740	.	-	.	ID=GCA000012185_00164_gene;locus_tag=GCA000012185_00164;gene=thrA
contig_1	Pyrodigal	CDS	151293	153740	.	-	0	ID=GCA000012185_00164;Name=bifunctional aspartate kinase/homoserine dehydrogenase I;locus_tag=GCA000012185_00164;product=bifunctional aspartate kinase/homoserine dehydrogenase I;Dbxref=GO:0004072,GO:0004412,GO:0005524,GO:0008652,GO:0009067,GO:0009086,GO:0009088,GO:0009089,GO:0009090,GO:0046872,GO:0050661,GO:0070403;gene=thrA;Parent=GCA000012185_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,KEGG:K12524,RefSeq:WP_011271870.1,SO:0001217,UniParc:UPI000053E030,UniRef:UniRef100_A0A2R3FZK0,UniRef:UniRef50_P00561,UniRef:UniRef90_P44505;ec_number=2.7.2.4
contig_1	Infernal	regulatory_region	153774	153891	5.4e-10	-	.	ID=JPLKGDNPJF_107;Name=Threonine operon leader;product=Threonine operon leader;Dbxref=RFAM:RF00506;inference=profile:Rfam:RF00506;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	154064	154777	.	+	.	ID=GCA000012185_00165_gene;locus_tag=GCA000012185_00165;gene=yggS
contig_1	Pyrodigal	CDS	154064	154777	.	+	0	ID=GCA000012185_00165;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA000012185_00165;product=Pyridoxal phosphate homeostasis protein;gene=yggS;Parent=GCA000012185_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0325,COG:H,RefSeq:WP_011271871.1,SO:0001217,UniParc:UPI00003CDA35,UniRef:UniRef100_A0A2S9S8E6,UniRef:UniRef50_P67080,UniRef:UniRef90_A0A0H3PBF2
contig_1	Pyrodigal	gene	154817	155953	.	-	.	ID=GCA000012185_00166_gene;locus_tag=GCA000012185_00166;gene=glxK
contig_1	Pyrodigal	CDS	154817	155953	.	-	0	ID=GCA000012185_00166;Name=Glycerate kinase;locus_tag=GCA000012185_00166;product=Glycerate kinase;Dbxref=GO:0005524,GO:0008887,GO:0031388;gene=glxK;Parent=GCA000012185_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00865,RefSeq:WP_011271872.1,SO:0001217,UniParc:UPI00003CDA34,UniRef:UniRef100_A0AAJ8WC26,UniRef:UniRef50_P23524,UniRef:UniRef90_P44507;ec_number=2.7.1.31
contig_1	Pyrodigal	gene	155962	157221	.	-	.	ID=GCA000012185_00167_gene;locus_tag=GCA000012185_00167;gene=gntT
contig_1	Pyrodigal	CDS	155962	157221	.	-	0	ID=GCA000012185_00167;Name=putative transporter HI_0092;locus_tag=GCA000012185_00167;product=putative transporter HI_0092;Dbxref=GO:0005886,GO:0015128,GO:0035429;gene=gntT;Parent=GCA000012185_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_005658366.1,SO:0001217,UniParc:UPI000053E031,UniRef:UniRef100_A0A0H3PKG5,UniRef:UniRef50_Q57493,UniRef:UniRef90_Q57493
contig_1	Pyrodigal	gene	157343	158449	.	-	.	ID=GCA000012185_00168_gene;locus_tag=GCA000012185_00168
contig_1	Pyrodigal	CDS	157343	158449	.	-	0	ID=GCA000012185_00168;Name=putative protein HI_0093;locus_tag=GCA000012185_00168;product=putative protein HI_0093;Parent=GCA000012185_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02647,RefSeq:WP_011271873.1,SO:0001217,UniParc:UPI00003CDB5C,UniRef:UniRef100_A0A2R3G0L9,UniRef:UniRef50_P44509,UniRef:UniRef90_P44509
contig_1	Pyrodigal	gene	158651	158971	.	-	.	ID=GCA000012185_00169_gene;locus_tag=GCA000012185_00169;gene=gntP
contig_1	Pyrodigal	CDS	158651	158971	.	-	0	ID=GCA000012185_00169;Name=GntP family permease;locus_tag=GCA000012185_00169;product=GntP family permease;gene=gntP;Parent=GCA000012185_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E032,UniRef:UniRef100_A0A2R3G0U3,UniRef:UniRef50_A0A0H3PBE9,UniRef:UniRef90_A0A0H3PBE9
contig_1	Pyrodigal	gene	159322	160077	.	-	.	ID=GCA000012185_00170_gene;locus_tag=GCA000012185_00170
contig_1	Pyrodigal	CDS	159322	160077	.	-	0	ID=GCA000012185_00170;Name=putative protein HI_0095;locus_tag=GCA000012185_00170;product=putative protein HI_0095;Dbxref=GO:0008168,GO:0032259;Parent=GCA000012185_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667899.1,SO:0001217,UniParc:UPI000039AD8F,UniRef:UniRef100_A0A2S9RF61,UniRef:UniRef50_Q57060,UniRef:UniRef90_Q57060
contig_1	Pyrodigal	gene	160317	160559	.	+	.	ID=GCA000012185_00171_gene;locus_tag=GCA000012185_00171
contig_1	Pyrodigal	CDS	160317	160559	.	+	0	ID=GCA000012185_00171;Name=hypothetical protein;locus_tag=GCA000012185_00171;product=hypothetical protein;Parent=GCA000012185_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002DF0D95,UniRef:UniRef100_A0A2S9RF86,UniRef:UniRef50_A0A0D0HP43,UniRef:UniRef90_A0A0D0HP43
contig_1	Pyrodigal	gene	160711	161709	.	+	.	ID=GCA000012185_00172_gene;locus_tag=GCA000012185_00172;gene=fbpA
contig_1	Pyrodigal	CDS	160711	161709	.	+	0	ID=GCA000012185_00172;Name=Iron-utilization periplasmic protein;locus_tag=GCA000012185_00172;product=Iron-utilization periplasmic protein;Dbxref=GO:0006826,GO:0042597,GO:0046872,GO:0055085;gene=fbpA;Parent=GCA000012185_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K02012,RefSeq:WP_005667903.1,SO:0001217,UniParc:UPI000012C90B,UniRef:UniRef100_P35755,UniRef:UniRef50_P35755,UniRef:UniRef90_P35755
contig_1	Pyrodigal	gene	161827	163347	.	+	.	ID=GCA000012185_00173_gene;locus_tag=GCA000012185_00173;gene=fbpB2
contig_1	Pyrodigal	CDS	161827	163347	.	+	0	ID=GCA000012185_00173;Name=iron ABC transporter permease;locus_tag=GCA000012185_00173;product=iron ABC transporter permease;Dbxref=GO:0005886,GO:0006826,GO:0055085;gene=fbpB2;Parent=GCA000012185_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02011,RefSeq:WP_005687630.1,SO:0001217,UniParc:UPI000053E034,UniRef:UniRef100_A0A2S9RHX4,UniRef:UniRef50_P71338,UniRef:UniRef90_P71338,VFDB:VFC0272,VFDB:VFG000343
contig_1	Pyrodigal	gene	163334	164404	.	+	.	ID=GCA000012185_00174_gene;locus_tag=GCA000012185_00174;gene=fbpC
contig_1	Pyrodigal	CDS	163334	164404	.	+	0	ID=GCA000012185_00174;Name=Fe(3+) ABC transporter ATP-binding protein FbpC;locus_tag=GCA000012185_00174;product=Fe(3+) ABC transporter ATP-binding protein FbpC;Dbxref=GO:0005524,GO:0005886,GO:0015408,GO:0016887;gene=fbpC;Parent=GCA000012185_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693820,COG:COG3842,COG:E,RefSeq:WP_032821670.1,SO:0001217,UniParc:UPI0000E60426,UniRef:UniRef100_Q4QP85,UniRef:UniRef50_P44513,UniRef:UniRef90_P44513;ec_number=7.2.2.7
contig_1	Pyrodigal	gene	164439	165119	.	-	.	ID=GCA000012185_00175_gene;locus_tag=GCA000012185_00175;gene=ldcB
contig_1	Pyrodigal	CDS	164439	165119	.	-	0	ID=GCA000012185_00175;Name=Bifunctional aspartokinase I/homeserine dehydrogenase I;locus_tag=GCA000012185_00175;product=Bifunctional aspartokinase I/homeserine dehydrogenase I;gene=ldcB;Parent=GCA000012185_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1876,COG:M,RefSeq:WP_005687632.1,SO:0001217,UniParc:UPI000053E035,UniRef:UniRef100_A0A2V0RXV2,UniRef:UniRef50_A5UFQ6,UniRef:UniRef90_A5UFQ6
contig_1	Pyrodigal	gene	165121	166254	.	-	.	ID=GCA000012185_00176_gene;locus_tag=GCA000012185_00176;gene=dapE
contig_1	Pyrodigal	CDS	165121	166254	.	-	0	ID=GCA000012185_00176;Name=succinyl-diaminopimelate desuccinylase;locus_tag=GCA000012185_00176;product=succinyl-diaminopimelate desuccinylase;Dbxref=GO:0005829,GO:0008270,GO:0009014,GO:0009089,GO:0019877,GO:0050897;gene=dapE;Parent=GCA000012185_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_005687633.1,SO:0001217,UniParc:UPI00003CD791,UniRef:UniRef100_Q4QP83,UniRef:UniRef50_P44514,UniRef:UniRef90_P44514;ec_number=3.5.1.18
contig_1	Pyrodigal	gene	166282	166626	.	-	.	ID=GCA000012185_00177_gene;locus_tag=GCA000012185_00177;gene=arsC
contig_1	Pyrodigal	CDS	166282	166626	.	-	0	ID=GCA000012185_00177;Name=ArsC family reductase;locus_tag=GCA000012185_00177;product=ArsC family reductase;gene=arsC;Parent=GCA000012185_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_005687634.1,SO:0001217,UniParc:UPI00003CD792,UniRef:UniRef100_A0A2R3FKN5,UniRef:UniRef50_P44515,UniRef:UniRef90_P44515
contig_1	Pyrodigal	gene	166705	168585	.	-	.	ID=GCA000012185_00178_gene;locus_tag=GCA000012185_00178;gene=htpG
contig_1	Pyrodigal	CDS	166705	168585	.	-	0	ID=GCA000012185_00178;Name=molecular chaperone HtpG;locus_tag=GCA000012185_00178;product=molecular chaperone HtpG;Dbxref=GO:0005524,GO:0005737,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=htpG;Parent=GCA000012185_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0326,COG:O,RefSeq:WP_005687637.1,SO:0001217,UniParc:UPI0000E570A3,UniRef:UniRef100_Q4QP81,UniRef:UniRef50_P44516,UniRef:UniRef90_P44516
contig_1	Pyrodigal	gene	168896	169651	.	+	.	ID=GCA000012185_00179_gene;locus_tag=GCA000012185_00179;gene=nIF3
contig_1	Pyrodigal	CDS	168896	169651	.	+	0	ID=GCA000012185_00179;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA000012185_00179;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0046872,GO:0051540;gene=nIF3;Parent=GCA000012185_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0327,COG:H,RefSeq:WP_038440928.1,SO:0001217,UniParc:UPI00031512FE,UniRef:UniRef100_A0A2S9S8G7,UniRef:UniRef50_Q57354,UniRef:UniRef90_Q57354
contig_1	Pyrodigal	gene	169825	172197	.	+	.	ID=GCA000012185_00180_gene;locus_tag=GCA000012185_00180;gene=hsdM
contig_1	Pyrodigal	CDS	169825	172197	.	+	0	ID=GCA000012185_00180;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000012185_00180;product=site-specific DNA-methyltransferase (adenine-specific);gene=hsdM;Parent=GCA000012185_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,KEGG:K03427,RefSeq:WP_011271878.1,SO:0001217,UniParc:UPI00003E58BD,UniRef:UniRef100_A0A2S9S8K7,UniRef:UniRef50_B2VHF4,UniRef:UniRef90_A0A2X4R7J3;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	172326	173789	.	+	.	ID=GCA000012185_00181_gene;locus_tag=GCA000012185_00181
contig_1	Pyrodigal	CDS	172326	173789	.	+	0	ID=GCA000012185_00181;Name=ATPase;locus_tag=GCA000012185_00181;product=ATPase;Parent=GCA000012185_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2865,COG:K,RefSeq:WP_005687643.1,SO:0001217,UniParc:UPI0001A3F7BA,UniRef:UniRef100_A0A2R3FJJ0,UniRef:UniRef50_A0A0E9LTP0,UniRef:UniRef90_A0A2R3FJJ0
contig_1	Pyrodigal	gene	173961	175211	.	+	.	ID=GCA000012185_00182_gene;locus_tag=GCA000012185_00182;gene=hsdS
contig_1	Pyrodigal	CDS	173961	175211	.	+	0	ID=GCA000012185_00182;Name=Restriction endonuclease subunit S;locus_tag=GCA000012185_00182;product=Restriction endonuclease subunit S;gene=hsdS;Parent=GCA000012185_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0732,COG:V,KEGG:K01154,RefSeq:WP_011271880.1,SO:0001217,UniParc:UPI00003CD8D7,UniRef:UniRef100_A0A2R3FZT1,UniRef:UniRef50_A0A137REZ0,UniRef:UniRef90_A0A2R3FZT1;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	175311	178337	.	+	.	ID=GCA000012185_00183_gene;locus_tag=GCA000012185_00183
contig_1	Pyrodigal	CDS	175311	178337	.	+	0	ID=GCA000012185_00183;Name=type I site-specific deoxyribonuclease;locus_tag=GCA000012185_00183;product=type I site-specific deoxyribonuclease;Parent=GCA000012185_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0610,COG:V,KEGG:K01153,RefSeq:WP_011271881.1,SO:0001217,UniParc:UPI000053E039,UniRef:UniRef100_A0A346KA65,UniRef:UniRef50_I4AFD8,UniRef:UniRef90_A0A2X4UIS7;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	178562	179941	.	-	.	ID=GCA000012185_00184_gene;locus_tag=GCA000012185_00184;gene=ffh
contig_1	Pyrodigal	CDS	178562	179941	.	-	0	ID=GCA000012185_00184;Name=signal recognition particle protein;locus_tag=GCA000012185_00184;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501;gene=ffh;Parent=GCA000012185_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03106,RefSeq:WP_011271882.1,SO:0001217,UniParc:UPI000053E03A,UniRef:UniRef100_A0A2S9S8H2,UniRef:UniRef50_A0A1G7R9I6,UniRef:UniRef90_A0A2S9S8H2;ec_number=3.6.5.4
contig_1	Pyrodigal	gene	180222	181484	.	+	.	ID=GCA000012185_00185_gene;locus_tag=GCA000012185_00185;gene=corB
contig_1	Pyrodigal	CDS	180222	181484	.	+	0	ID=GCA000012185_00185;Name=UPF0053 protein HI_0107;locus_tag=GCA000012185_00185;product=UPF0053 protein HI_0107;Dbxref=GO:0005886,GO:0050660;gene=corB;Parent=GCA000012185_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,RefSeq:WP_032828395.1,SO:0001217,UniParc:UPI000013AEC0,UniRef:UniRef100_Q57017,UniRef:UniRef50_Q57017,UniRef:UniRef90_Q57017
contig_1	Pyrodigal	gene	181613	182383	.	+	.	ID=GCA000012185_00186_gene;locus_tag=GCA000012185_00186
contig_1	Pyrodigal	CDS	181613	182383	.	+	0	ID=GCA000012185_00186;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000012185_00186;product=Threonine/serine exporter-like N-terminal domain-containing protein;Parent=GCA000012185_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_013525480.1,SO:0001217,UniParc:UPI0001F36DE6,UniRef:UniRef100_Q4QP73,UniRef:UniRef50_H1LMH9,UniRef:UniRef90_H1LMH9
contig_1	Pyrodigal	gene	182385	182864	.	+	.	ID=GCA000012185_00187_gene;locus_tag=GCA000012185_00187;gene=thrE
contig_1	Pyrodigal	CDS	182385	182864	.	+	0	ID=GCA000012185_00187;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000012185_00187;product=Threonine/Serine exporter ThrE domain-containing protein;gene=thrE;Parent=GCA000012185_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271885.1,SO:0001217,UniParc:UPI00003CD9B9,UniRef:UniRef100_A0AAJ8WRB8,UniRef:UniRef50_B4EX78,UniRef:UniRef90_H1LMI0
contig_1	Pyrodigal	gene	182954	183295	.	-	.	ID=GCA000012185_00188_gene;locus_tag=GCA000012185_00188
contig_1	Pyrodigal	CDS	182954	183295	.	-	0	ID=GCA000012185_00188;Name=putative protein HI_0109;locus_tag=GCA000012185_00188;product=putative protein HI_0109;Parent=GCA000012185_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271886.1,SO:0001217,UniParc:UPI00003CD9BA,UniRef:UniRef100_A0A2S9R6C7,UniRef:UniRef50_P43943,UniRef:UniRef90_P43943
contig_1	Pyrodigal	gene	183462	184751	.	+	.	ID=GCA000012185_00189_gene;locus_tag=GCA000012185_00189;gene=serS
contig_1	Pyrodigal	CDS	183462	184751	.	+	0	ID=GCA000012185_00189;Name=serine--tRNA ligase;locus_tag=GCA000012185_00189;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260;gene=serS;Parent=GCA000012185_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,RefSeq:WP_011271887.1,SO:0001217,UniParc:UPI000053E03D,UniRef:UniRef100_Q4QP70,UniRef:UniRef50_A1WWU7,UniRef:UniRef90_P43833;ec_number=6.1.1.11
contig_1	Pyrodigal	gene	185086	185715	.	+	.	ID=GCA000012185_00190_gene;locus_tag=GCA000012185_00190;gene=gst
contig_1	Pyrodigal	CDS	185086	185715	.	+	0	ID=GCA000012185_00190;Name=Glutathione S-transferase;locus_tag=GCA000012185_00190;product=Glutathione S-transferase;Dbxref=GO:0004364,GO:0005737;gene=gst;Parent=GCA000012185_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_005654237.1,SO:0001217,UniParc:UPI00003CDD4F,UniRef:UniRef100_A0A2S9R6C8,UniRef:UniRef50_P44521,UniRef:UniRef90_P44521;ec_number=2.5.1.18
contig_1	Pyrodigal	gene	186076	188313	.	+	.	ID=GCA000012185_00191_gene;locus_tag=GCA000012185_00191;gene=tdhA
contig_1	Pyrodigal	CDS	186076	188313	.	+	0	ID=GCA000012185_00191;Name=TonB-dependent heme receptor A;locus_tag=GCA000012185_00191;product=TonB-dependent heme receptor A;Dbxref=GO:0009279,GO:0015232,GO:0015344,GO:0044718;gene=tdhA;Parent=GCA000012185_00191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_011271889.1,SO:0001217,UniParc:UPI000053E03F,UniRef:UniRef100_Q4QP67,UniRef:UniRef50_Q7VNU1,UniRef:UniRef90_P44523
contig_1	Infernal	gene	189265	189380	.	-	.	ID=GCA000012185_00192_gene;locus_tag=GCA000012185_00192;gene=rrf
contig_1	Infernal	rRNA	189265	189380	6.8e-14	-	.	ID=GCA000012185_00192;Name=5S ribosomal RNA;locus_tag=GCA000012185_00192;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00192_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	189623	192738	.	-	.	ID=GCA000012185_00193_gene;locus_tag=GCA000012185_00193;gene=rrl
contig_1	Infernal	rRNA	189623	192738	3e-06	-	.	ID=GCA000012185_00193;Name=23S ribosomal RNA;locus_tag=GCA000012185_00193;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_00193_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	193008	193083	.	-	.	ID=GCA000012185_00194_gene;locus_tag=GCA000012185_00194;gene=trnE
contig_1	tRNAscan-SE	tRNA	193008	193083	.	-	.	ID=GCA000012185_00194;Name=tRNA-Glu(ttc);locus_tag=GCA000012185_00194;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000012185_00194_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	193215	194754	.	-	.	ID=GCA000012185_00195_gene;locus_tag=GCA000012185_00195;gene=rrs
contig_1	Infernal	rRNA	193215	194754	6.5e-47	-	.	ID=GCA000012185_00195;Name=16S ribosomal RNA;locus_tag=GCA000012185_00195;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_00195_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	194933	195009	.	-	.	ID=GCA000012185_00196_gene;locus_tag=GCA000012185_00196;gene=trnP
contig_1	tRNAscan-SE	tRNA	194933	195009	.	-	.	ID=GCA000012185_00196;Name=tRNA-Pro(tgg);locus_tag=GCA000012185_00196;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000012185_00196_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	195031	195106	.	-	.	ID=GCA000012185_00197_gene;locus_tag=GCA000012185_00197;gene=trnH
contig_1	tRNAscan-SE	tRNA	195031	195106	.	-	.	ID=GCA000012185_00197;Name=tRNA-His(gtg);locus_tag=GCA000012185_00197;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000012185_00197_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	195133	195209	.	-	.	ID=GCA000012185_00198_gene;locus_tag=GCA000012185_00198;gene=trnR
contig_1	tRNAscan-SE	tRNA	195133	195209	.	-	.	ID=GCA000012185_00198;Name=tRNA-Arg(ccg);locus_tag=GCA000012185_00198;product=tRNA-Arg(ccg);gene=trnR;anti_codon=ccg;amino_acid=Arg;Parent=GCA000012185_00198_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	195361	197496	.	-	.	ID=GCA000012185_00199_gene;locus_tag=GCA000012185_00199;gene=rlmL
contig_1	Pyrodigal	CDS	195361	197496	.	-	0	ID=GCA000012185_00199;Name=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;locus_tag=GCA000012185_00199;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;Dbxref=GO:0003723,GO:0005737,GO:0008990,GO:0031167,GO:0052915,GO:0070043;gene=rlmL;Parent=GCA000012185_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,KEGG:K12297,RefSeq:WP_011271890.1,SO:0001217,UniParc:UPI00003CDB45,UniRef:UniRef100_Q4QP66,UniRef:UniRef50_Q7VP04,UniRef:UniRef90_P44524;ec_number=2.1.1.264
contig_1	tRNAscan-SE	gene	197626	197702	.	-	.	ID=GCA000012185_00200_gene;locus_tag=GCA000012185_00200;gene=trnfM
contig_1	tRNAscan-SE	tRNA	197626	197702	.	-	.	ID=GCA000012185_00200;Name=tRNA-fMet(cat);locus_tag=GCA000012185_00200;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000012185_00200_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	197889	198998	.	+	.	ID=GCA000012185_00201_gene;locus_tag=GCA000012185_00201;gene=mltA
contig_1	Pyrodigal	CDS	197889	198998	.	+	0	ID=GCA000012185_00201;Name=murein transglycosylase A;locus_tag=GCA000012185_00201;product=murein transglycosylase A;Dbxref=GO:0004553,GO:0009254,GO:0019867;gene=mltA;Parent=GCA000012185_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2821,COG:M,RefSeq:WP_011271891.1,SO:0001217,UniParc:UPI00003CD8D9,UniRef:UniRef100_A0A2S9S904,UniRef:UniRef50_F0EUI1,UniRef:UniRef90_A0A0D0IBW5;ec_number=4.2.2.-
contig_1	Pyrodigal	gene	198998	199768	.	+	.	ID=GCA000012185_00202_gene;locus_tag=GCA000012185_00202;gene=tcdA
contig_1	Pyrodigal	CDS	198998	199768	.	+	0	ID=GCA000012185_00202;Name=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;locus_tag=GCA000012185_00202;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;Dbxref=GO:0005524,GO:0008641,GO:0016020,GO:0061503,GO:0061504;gene=tcdA;Parent=GCA000012185_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_005668509.1,SO:0001217,UniParc:UPI000039AF13,UniRef:UniRef100_A0A346KA54,UniRef:UniRef50_Q57097,UniRef:UniRef90_Q57097;ec_number=6.1.-.-
contig_1	Pyrodigal	gene	199946	200947	.	+	.	ID=GCA000012185_00203_gene;locus_tag=GCA000012185_00203;gene=znuA
contig_1	Pyrodigal	CDS	199946	200947	.	+	0	ID=GCA000012185_00203;Name=zinc ABC transporter substrate-binding protein ZnuA;locus_tag=GCA000012185_00203;product=zinc ABC transporter substrate-binding protein ZnuA;Dbxref=GO:0006829,GO:0042597,GO:0046872;gene=znuA;Parent=GCA000012185_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4531,COG:P,RefSeq:WP_011271892.1,SO:0001217,UniParc:UPI00003CD8DA,UniRef:UniRef100_Q4QP63,UniRef:UniRef50_P44526,UniRef:UniRef90_P44526;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	200997	201503	.	-	.	ID=GCA000012185_00204_gene;locus_tag=GCA000012185_00204
contig_1	Pyrodigal	CDS	200997	201503	.	-	0	ID=GCA000012185_00204;Name=putative protein HI_0120;locus_tag=GCA000012185_00204;product=putative protein HI_0120;Dbxref=GO:0005886;Parent=GCA000012185_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5413,COG:S,RefSeq:WP_005653606.1,SO:0001217,UniParc:UPI00001392D8,UniRef:UniRef100_P43947,UniRef:UniRef50_P43947,UniRef:UniRef90_P43947
contig_1	Pyrodigal	gene	201616	202974	.	-	.	ID=GCA000012185_00205_gene;locus_tag=GCA000012185_00205;gene=mpl
contig_1	Pyrodigal	CDS	201616	202974	.	-	0	ID=GCA000012185_00205;Name=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;locus_tag=GCA000012185_00205;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;Dbxref=GO:0005524,GO:0008360,GO:0009252,GO:0009254,GO:0016881,GO:0051301,GO:0071555,GO:0106418;gene=mpl;Parent=GCA000012185_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K02558,RefSeq:WP_011271893.1,SO:0001217,UniParc:UPI00003CD8DB,UniRef:UniRef100_A0A3E1QG73,UniRef:UniRef50_P37773,UniRef:UniRef90_P43948;ec_number=6.3.2.45
contig_1	Pyrodigal	gene	203359	204546	.	-	.	ID=GCA000012185_00206_gene;locus_tag=GCA000012185_00206;gene=metC
contig_1	Pyrodigal	CDS	203359	204546	.	-	0	ID=GCA000012185_00206;Name=cystathionine beta-lyase;locus_tag=GCA000012185_00206;product=cystathionine beta-lyase;Dbxref=GO:0005737,GO:0006520,GO:0009086,GO:0019346,GO:0019450,GO:0030170,GO:0047804;gene=metC;Parent=GCA000012185_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_011271894.1,SO:0001217,UniParc:UPI00003CDC82,UniRef:UniRef100_A0A2S9S912,UniRef:UniRef50_P06721,UniRef:UniRef90_P44527;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	204683	205285	.	+	.	ID=GCA000012185_00207_gene;locus_tag=GCA000012185_00207;gene=ahpC
contig_1	Pyrodigal	CDS	204683	205285	.	+	0	ID=GCA000012185_00207;Name=Peroxiredoxin C;locus_tag=GCA000012185_00207;product=Peroxiredoxin C;gene=ahpC;Parent=GCA000012185_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0450,COG:V,RefSeq:WP_005649619.1,SO:0001217,UniParc:UPI000034EBE8,UniRef:UniRef100_Q6Q511,UniRef:UniRef50_P56876,UniRef:UniRef90_Q6Q511
contig_1	Pyrodigal	gene	205431	205943	.	+	.	ID=GCA000012185_00208_gene;locus_tag=GCA000012185_00208;gene=pgsA
contig_1	Pyrodigal	CDS	205431	205943	.	+	0	ID=GCA000012185_00208;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;locus_tag=GCA000012185_00208;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;Dbxref=GO:0005886,GO:0006655,GO:0008444,GO:0008654,GO:0016020,GO:0046474;gene=pgsA;Parent=GCA000012185_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,KEGG:K00995,SO:0001217,UniParc:UPI0002E1519D,UniRef:UniRef100_A0A2S9S917,UniRef:UniRef50_Q6D364,UniRef:UniRef90_P44528;ec_number=2.7.8.5
contig_1	tRNAscan-SE	gene	206099	206174	.	+	.	ID=GCA000012185_00209_gene;locus_tag=GCA000012185_00209;gene=trnG
contig_1	tRNAscan-SE	tRNA	206099	206174	.	+	.	ID=GCA000012185_00209;Name=tRNA-Gly(gcc);locus_tag=GCA000012185_00209;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000012185_00209_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	206179	206265	.	+	.	ID=GCA000012185_00210_gene;locus_tag=GCA000012185_00210;gene=trnL
contig_1	tRNAscan-SE	tRNA	206179	206265	.	+	.	ID=GCA000012185_00210;Name=tRNA-Leu(taa);locus_tag=GCA000012185_00210;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000012185_00210_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	206316	206391	.	+	.	ID=GCA000012185_00211_gene;locus_tag=GCA000012185_00211;gene=trnK
contig_1	tRNAscan-SE	tRNA	206316	206391	.	+	.	ID=GCA000012185_00211;Name=tRNA-Lys(ttt);locus_tag=GCA000012185_00211;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000012185_00211_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	206507	207037	.	-	.	ID=GCA000012185_00212_gene;locus_tag=GCA000012185_00212;gene=ppa
contig_1	Pyrodigal	CDS	206507	207037	.	-	0	ID=GCA000012185_00212;Name=Inorganic pyrophosphatase;locus_tag=GCA000012185_00212;product=Inorganic pyrophosphatase;Dbxref=GO:0000287,GO:0004427,GO:0005829,GO:0006796;gene=ppa;Parent=GCA000012185_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0221,RefSeq:WP_005630160.1,SO:0001217,UniParc:UPI000012D835,UniRef:UniRef100_P44529,UniRef:UniRef50_P44529,UniRef:UniRef90_P44529;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	207271	208587	.	+	.	ID=GCA000012185_00213_gene;locus_tag=GCA000012185_00213;gene=nCS2
contig_1	Pyrodigal	CDS	207271	208587	.	+	0	ID=GCA000012185_00213;Name=Putative permease HI_0125;locus_tag=GCA000012185_00213;product=Putative permease HI_0125;Dbxref=GO:0005524,GO:0005886,GO:0015208;gene=nCS2;Parent=GCA000012185_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_005694416.1,SO:0001217,UniParc:UPI00000378D7,UniRef:UniRef100_P44530,UniRef:UniRef50_Q46817,UniRef:UniRef90_P44530
contig_1	Pyrodigal	gene	208810	209451	.	+	.	ID=GCA000012185_00214_gene;locus_tag=GCA000012185_00214;gene=udk
contig_1	Pyrodigal	CDS	208810	209451	.	+	0	ID=GCA000012185_00214;Name=uridine kinase;locus_tag=GCA000012185_00214;product=uridine kinase;Dbxref=GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211,GO:0046108;gene=udk;Parent=GCA000012185_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,KEGG:K00876,RefSeq:WP_005654445.1,SO:0001217,UniParc:UPI0000137E08,UniRef:UniRef100_P44533,UniRef:UniRef50_P44533,UniRef:UniRef90_P44533;ec_number=2.7.1.48
contig_1	Pyrodigal	gene	209460	210047	.	+	.	ID=GCA000012185_00215_gene;locus_tag=GCA000012185_00215;gene=dcd
contig_1	Pyrodigal	CDS	209460	210047	.	+	0	ID=GCA000012185_00215;Name=dCTP deaminase;locus_tag=GCA000012185_00215;product=dCTP deaminase;Dbxref=GO:0000166,GO:0006226,GO:0006229,GO:0008829,GO:0015949;gene=dcd;Parent=GCA000012185_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0717,COG:F,KEGG:K01494,RefSeq:WP_005649599.1,SO:0001217,UniParc:UPI000039A928,UniRef:UniRef100_Q4QP54,UniRef:UniRef50_A6VMP5,UniRef:UniRef90_Q4QP54;ec_number=3.5.4.13
contig_1	Pyrodigal	gene	210051	211226	.	+	.	ID=GCA000012185_00216_gene;locus_tag=GCA000012185_00216
contig_1	Pyrodigal	CDS	210051	211226	.	+	0	ID=GCA000012185_00216;Name=putative protein HI_0134;locus_tag=GCA000012185_00216;product=putative protein HI_0134;Dbxref=GO:0016020;Parent=GCA000012185_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271895.1,SO:0001217,UniParc:UPI00003CD9E8,UniRef:UniRef100_Q4QP53,UniRef:UniRef50_P43952,UniRef:UniRef90_P43952
contig_1	Pyrodigal	gene	211226	212434	.	+	.	ID=GCA000012185_00217_gene;locus_tag=GCA000012185_00217;gene=sotB
contig_1	Pyrodigal	CDS	211226	212434	.	+	0	ID=GCA000012185_00217;Name=sugar transporter;locus_tag=GCA000012185_00217;product=sugar transporter;Dbxref=GO:0005886,GO:0015144,GO:0022857,GO:0055085;gene=sotB;Parent=GCA000012185_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08159,RefSeq:WP_011271896.1,SO:0001217,UniParc:UPI00003CD9E9,UniRef:UniRef100_Q4QP52,UniRef:UniRef50_O25797,UniRef:UniRef90_P44535
contig_1	Pyrodigal	gene	212495	214009	.	-	.	ID=GCA000012185_00218_gene;locus_tag=GCA000012185_00218;gene=der
contig_1	Pyrodigal	CDS	212495	214009	.	-	0	ID=GCA000012185_00218;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000012185_00218;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016887,GO:0042254,GO:0043022;gene=der;Parent=GCA000012185_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,KEGG:K03977,RefSeq:WP_005694423.1,SO:0001217,UniParc:UPI00000378DA,UniRef:UniRef100_P44536,UniRef:UniRef50_P44536,UniRef:UniRef90_P44536;ec_number=3.6.5.-
contig_1	tRNAscan-SE	gene	214427	214503	.	-	.	ID=GCA000012185_00219_gene;locus_tag=GCA000012185_00219;gene=trnD
contig_1	tRNAscan-SE	tRNA	214427	214503	.	-	.	ID=GCA000012185_00219;Name=tRNA-Asp(gtc);locus_tag=GCA000012185_00219;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000012185_00219_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	214527	214603	.	-	.	ID=GCA000012185_00220_gene;locus_tag=GCA000012185_00220;gene=trnD
contig_1	tRNAscan-SE	tRNA	214527	214603	.	-	.	ID=GCA000012185_00220;Name=tRNA-Asp(gtc);locus_tag=GCA000012185_00220;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000012185_00220_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	214691	215458	.	-	.	ID=GCA000012185_00221_gene;locus_tag=GCA000012185_00221;gene=dnaQ
contig_1	Pyrodigal	CDS	214691	215458	.	-	0	ID=GCA000012185_00221;Name=DNA polymerase III subunit epsilon;locus_tag=GCA000012185_00221;product=DNA polymerase III subunit epsilon;Dbxref=GO:0003677,GO:0003887,GO:0005829,GO:0006260,GO:0008408,GO:0045004,GO:0046872;gene=dnaQ;Parent=GCA000012185_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_011271897.1,SO:0001217,UniParc:UPI000053E040,UniRef:UniRef100_Q4QP50,UniRef:UniRef50_P03007,UniRef:UniRef90_P43745;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	215519	215983	.	+	.	ID=GCA000012185_00222_gene;locus_tag=GCA000012185_00222;gene=rnhA
contig_1	Pyrodigal	CDS	215519	215983	.	+	0	ID=GCA000012185_00222;Name=ribonuclease HI;locus_tag=GCA000012185_00222;product=ribonuclease HI;Dbxref=GO:0000287,GO:0003676,GO:0004523,GO:0005737,GO:0043137;gene=rnhA;Parent=GCA000012185_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,KEGG:K03469,RefSeq:WP_005687959.1,SO:0001217,UniParc:UPI000053E041,UniRef:UniRef100_Q4QP49,UniRef:UniRef50_B0TRM1,UniRef:UniRef90_P43807;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	216249	217346	.	+	.	ID=GCA000012185_00223_gene;locus_tag=GCA000012185_00223;gene=ompP2
contig_1	Pyrodigal	CDS	216249	217346	.	+	0	ID=GCA000012185_00223;Name=Outer membrane protein P2;locus_tag=GCA000012185_00223;product=Outer membrane protein P2;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0046930;gene=ompP2;Parent=GCA000012185_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271898.1,SO:0001217,UniParc:UPI000053E042,UniRef:UniRef100_Q4QP48,UniRef:UniRef50_P46025,UniRef:UniRef90_Q48218
contig_1	Pyrodigal	gene	217543	218688	.	-	.	ID=GCA000012185_00224_gene;locus_tag=GCA000012185_00224;gene=nagA
contig_1	Pyrodigal	CDS	217543	218688	.	-	0	ID=GCA000012185_00224;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000012185_00224;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0006046,GO:0008448,GO:0019262,GO:0046872,GO:0051289;gene=nagA;Parent=GCA000012185_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1820,COG:G,KEGG:K01443,RefSeq:WP_011271899.1,SO:0001217,UniParc:UPI00003CD935,UniRef:UniRef100_Q4QP47,UniRef:UniRef50_P44537,UniRef:UniRef90_P44537;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	218825	219637	.	-	.	ID=GCA000012185_00225_gene;locus_tag=GCA000012185_00225;gene=nagB
contig_1	Pyrodigal	CDS	218825	219637	.	-	0	ID=GCA000012185_00225;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000012185_00225;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0005737,GO:0005975,GO:0006043,GO:0006044,GO:0006046,GO:0019262,GO:0042802;gene=nagB;Parent=GCA000012185_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_011271900.1,SO:0001217,UniParc:UPI00003CD934,UniRef:UniRef100_Q4QP46,UniRef:UniRef50_P0A759,UniRef:UniRef90_Q4QP46;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	219973	220854	.	-	.	ID=GCA000012185_00226_gene;locus_tag=GCA000012185_00226;gene=nanA
contig_1	Pyrodigal	CDS	219973	220854	.	-	0	ID=GCA000012185_00226;Name=N-acetylneuraminate lyase;locus_tag=GCA000012185_00226;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA000012185_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_005658102.1,SO:0001217,UniParc:UPI000039A934,UniRef:UniRef100_A0A0H3PBM9,UniRef:UniRef50_Q2G160,UniRef:UniRef90_P44539;ec_number=4.1.3.3
contig_1	Pyrodigal	gene	220865	221731	.	-	.	ID=GCA000012185_00227_gene;locus_tag=GCA000012185_00227;gene=rpiR
contig_1	Pyrodigal	CDS	220865	221731	.	-	0	ID=GCA000012185_00227;Name=putative HTH-type transcriptional regulator HI_0143;locus_tag=GCA000012185_00227;product=putative HTH-type transcriptional regulator HI_0143;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0097367,GO:1901135;gene=rpiR;Parent=GCA000012185_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_005648620.1,SO:0001217,UniParc:UPI00003CD933,UniRef:UniRef100_A0A0D0GZK3,UniRef:UniRef50_P44540,UniRef:UniRef90_P44540
contig_1	Pyrodigal	gene	221724	222626	.	-	.	ID=GCA000012185_00228_gene;locus_tag=GCA000012185_00228;gene=nanK
contig_1	Pyrodigal	CDS	221724	222626	.	-	0	ID=GCA000012185_00228;Name=N-acetylmannosamine kinase;locus_tag=GCA000012185_00228;product=N-acetylmannosamine kinase;Dbxref=GO:0005524,GO:0008270,GO:0009384,GO:0019262;gene=nanK;Parent=GCA000012185_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,KEGG:K00885,RefSeq:WP_011271901.1,SO:0001217,UniParc:UPI000053E043,UniRef:UniRef100_Q4QP43,UniRef:UniRef50_Q8ZCG9,UniRef:UniRef90_Q4QP43;ec_number=2.7.1.60
contig_1	Pyrodigal	gene	222671	223357	.	-	.	ID=GCA000012185_00229_gene;locus_tag=GCA000012185_00229;gene=nanE
contig_1	Pyrodigal	CDS	222671	223357	.	-	0	ID=GCA000012185_00229;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000012185_00229;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Dbxref=GO:0005829,GO:0005975,GO:0006053,GO:0019262,GO:0047465;gene=nanE;Parent=GCA000012185_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_005660885.1,SO:0001217,UniParc:UPI000053E044,UniRef:UniRef100_A0A2S9RH28,UniRef:UniRef50_P71340,UniRef:UniRef90_P71340;ec_number=5.1.3.9
contig_1	Pyrodigal	gene	223707	224696	.	+	.	ID=GCA000012185_00230_gene;locus_tag=GCA000012185_00230;gene=siaP
contig_1	Pyrodigal	CDS	223707	224696	.	+	0	ID=GCA000012185_00230;Name=sialic acid TRAP transporter substrate-binding protein SiaP;locus_tag=GCA000012185_00230;product=sialic acid TRAP transporter substrate-binding protein SiaP;Dbxref=GO:0030288,GO:0055085;gene=siaP;Parent=GCA000012185_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694430,COG:COG1638,COG:G,RefSeq:WP_005691499.1,SO:0001217,UniParc:UPI000039A938,UniRef:UniRef100_Q4QP41,UniRef:UniRef50_P44542,UniRef:UniRef90_P44542
contig_1	Infernal	gene	224561	224677	.	-	.	ID=GCA000012185_00231_gene;locus_tag=GCA000012185_00231;gene=AaHKsRNA96
contig_1	Infernal	ncRNA	224561	224677	3.7e-19	-	.	ID=GCA000012185_00231;Name=Aggregatibacter sRNA 96;locus_tag=GCA000012185_00231;product=Aggregatibacter sRNA 96;Dbxref=RFAM:RF02903;Parent=GCA000012185_00231_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02903
contig_1	Pyrodigal	gene	224761	226611	.	+	.	ID=GCA000012185_00232_gene;locus_tag=GCA000012185_00232;gene=siaT
contig_1	Pyrodigal	CDS	224761	226611	.	+	0	ID=GCA000012185_00232;Name=sialic acid TRAP transporter substrate-binding protein SiaT;locus_tag=GCA000012185_00232;product=sialic acid TRAP transporter substrate-binding protein SiaT;Dbxref=GO:0005886,GO:0022857;gene=siaT;Parent=GCA000012185_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694432,COG:COG3090,COG:G,RefSeq:WP_011271902.1,SO:0001217,UniParc:UPI000053E045,UniRef:UniRef100_Q4QP40,UniRef:UniRef50_P44543,UniRef:UniRef90_P44543
contig_1	Pyrodigal	gene	226775	227914	.	+	.	ID=GCA000012185_00233_gene;locus_tag=GCA000012185_00233;gene=nanM
contig_1	Pyrodigal	CDS	226775	227914	.	+	0	ID=GCA000012185_00233;Name=N-acetylneuraminate epimerase;locus_tag=GCA000012185_00233;product=N-acetylneuraminate epimerase;Dbxref=GO:0016857,GO:0042597;gene=nanM;Parent=GCA000012185_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3055,COG:M,SO:0001217,UniParc:UPI000053E046,UniRef:UniRef100_Q4QP39,UniRef:UniRef50_P44544,UniRef:UniRef90_P44544;ec_number=5.1.3.24
contig_1	Pyrodigal	gene	228220	228510	.	+	.	ID=GCA000012185_00234_gene;locus_tag=GCA000012185_00234;gene=sTE14
contig_1	Pyrodigal	CDS	228220	228510	.	+	0	ID=GCA000012185_00234;Name=putative protein HI_0149;locus_tag=GCA000012185_00234;product=putative protein HI_0149;gene=sTE14;Parent=GCA000012185_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2020,COG:O,SO:0001217,UniParc:UPI0002E7386D,UniRef:UniRef100_A0A3E1QG64,UniRef:UniRef50_P43953,UniRef:UniRef90_P43953
contig_1	Pyrodigal	gene	228552	229439	.	-	.	ID=GCA000012185_00235_gene;locus_tag=GCA000012185_00235;gene=hflC
contig_1	Pyrodigal	CDS	228552	229439	.	-	0	ID=GCA000012185_00235;Name=protease modulator HflC;locus_tag=GCA000012185_00235;product=protease modulator HflC;Dbxref=GO:0016020,GO:0030288,GO:0045861;gene=hflC;Parent=GCA000012185_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_005660876.1,SO:0001217,UniParc:UPI000012C68A,UniRef:UniRef100_P44545,UniRef:UniRef50_P44545,UniRef:UniRef90_P44545
contig_1	Pyrodigal	gene	229439	230659	.	-	.	ID=GCA000012185_00236_gene;locus_tag=GCA000012185_00236;gene=hflK
contig_1	Pyrodigal	CDS	229439	230659	.	-	0	ID=GCA000012185_00236;Name=FtsH protease activity modulator HflK;locus_tag=GCA000012185_00236;product=FtsH protease activity modulator HflK;Dbxref=GO:0005886,GO:0016020,GO:0045861;gene=hflK;Parent=GCA000012185_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_005658118.1,SO:0001217,UniParc:UPI00014F758B,UniRef:UniRef100_A0A3E1QLP5,UniRef:UniRef50_P44546,UniRef:UniRef90_P44546
contig_1	Pyrodigal	gene	230781	231488	.	-	.	ID=GCA000012185_00237_gene;locus_tag=GCA000012185_00237;gene=sfp
contig_1	Pyrodigal	CDS	230781	231488	.	-	0	ID=GCA000012185_00237;Name=Putative 4'-phosphopantetheinyl transferase HI_0152;locus_tag=GCA000012185_00237;product=Putative 4'-phosphopantetheinyl transferase HI_0152;Dbxref=GO:0000287,GO:0005829,GO:0008897,GO:0019878;gene=sfp;Parent=GCA000012185_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_005658125.1,SO:0001217,UniParc:UPI00003CDCDF,UniRef:UniRef100_A0A0H3PG36,UniRef:UniRef50_P43954,UniRef:UniRef90_P43954;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	231548	232879	.	-	.	ID=GCA000012185_00238_gene;locus_tag=GCA000012185_00238;gene=dcuA
contig_1	Pyrodigal	CDS	231548	232879	.	-	0	ID=GCA000012185_00238;Name=C4-dicarboxylate transporter;locus_tag=GCA000012185_00238;product=C4-dicarboxylate transporter;gene=dcuA;Parent=GCA000012185_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2704,COG:G,RefSeq:WP_005654411.1,SO:0001217,UniParc:UPI000045EA44,UniRef:UniRef100_A0A2V0SBE0,UniRef:UniRef50_A0A248ZWY3,UniRef:UniRef90_A0A1B8PG10
contig_1	Pyrodigal	gene	233083	233313	.	-	.	ID=GCA000012185_00239_gene;locus_tag=GCA000012185_00239;gene=acpP
contig_1	Pyrodigal	CDS	233083	233313	.	-	0	ID=GCA000012185_00239;Name=acyl carrier protein;locus_tag=GCA000012185_00239;product=acyl carrier protein;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020;gene=acpP;Parent=GCA000012185_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_005544465.1,SO:0001217,UniParc:UPI0000125370,UniRef:UniRef100_P43709,UniRef:UniRef50_P43709,UniRef:UniRef90_P43709
contig_1	Pyrodigal	gene	233573	234301	.	-	.	ID=GCA000012185_00240_gene;locus_tag=GCA000012185_00240;gene=fabG
contig_1	Pyrodigal	CDS	233573	234301	.	-	0	ID=GCA000012185_00240;Name=3-oxoacyl-ACP reductase FabG;locus_tag=GCA000012185_00240;product=3-oxoacyl-ACP reductase FabG;Dbxref=GO:0004316,GO:0006633,GO:0016616,GO:0030497,GO:0050661,GO:0051287;gene=fabG;Parent=GCA000012185_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_011271905.1,SO:0001217,UniParc:UPI00003CDAE3,UniRef:UniRef100_A0A346KA23,UniRef:UniRef50_P43713,UniRef:UniRef90_P43713;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	234318	235256	.	-	.	ID=GCA000012185_00241_gene;locus_tag=GCA000012185_00241;gene=fabD
contig_1	Pyrodigal	CDS	234318	235256	.	-	0	ID=GCA000012185_00241;Name=ACP S-malonyltransferase;locus_tag=GCA000012185_00241;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0005829,GO:0006633;gene=fabD;Parent=GCA000012185_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0331,COG:I,RefSeq:WP_011271906.1,SO:0001217,UniParc:UPI000053E049,UniRef:UniRef100_A0A2S9S935,UniRef:UniRef50_P0AAI9,UniRef:UniRef90_P43712;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	235756	236706	.	-	.	ID=GCA000012185_00242_gene;locus_tag=GCA000012185_00242;gene=fabH
contig_1	Pyrodigal	CDS	235756	236706	.	-	0	ID=GCA000012185_00242;Name=Beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA000012185_00242;product=Beta-ketoacyl-[acyl-carrier-protein] synthase III;Dbxref=GO:0004315,GO:0005737,GO:0006633,GO:0033818,GO:0044550;gene=fabH;Parent=GCA000012185_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0332,COG:I,RefSeq:WP_005691510.1,SO:0001217,UniParc:UPI000012A46B,UniRef:UniRef100_P43711,UniRef:UniRef50_P43711,UniRef:UniRef90_P43711;ec_number=2.3.1.180
contig_1	Pyrodigal	gene	236892	237062	.	-	.	ID=GCA000012185_00243_gene;locus_tag=GCA000012185_00243;gene=rpmF
contig_1	Pyrodigal	CDS	236892	237062	.	-	0	ID=GCA000012185_00243;Name=50S ribosomal protein L32;locus_tag=GCA000012185_00243;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000012185_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_005544470.1,SO:0001217,UniParc:UPI0000168596,UniRef:UniRef100_P44368,UniRef:UniRef50_P44368,UniRef:UniRef90_P44368
contig_1	Pyrodigal	gene	237085	237609	.	-	.	ID=GCA000012185_00244_gene;locus_tag=GCA000012185_00244;gene=yceD
contig_1	Pyrodigal	CDS	237085	237609	.	-	0	ID=GCA000012185_00244;Name=23S rRNA accumulation protein YceD;locus_tag=GCA000012185_00244;product=23S rRNA accumulation protein YceD;Dbxref=GO:0005829,GO:0042254;gene=yceD;Parent=GCA000012185_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_005648653.1,SO:0001217,UniParc:UPI00003CDB6F,UniRef:UniRef100_Q4QP28,UniRef:UniRef50_P0AB28,UniRef:UniRef90_P43790
contig_1	Pyrodigal	gene	237766	238638	.	+	.	ID=GCA000012185_00245_gene;locus_tag=GCA000012185_00245;gene=asd
contig_1	Pyrodigal	CDS	237766	238638	.	+	0	ID=GCA000012185_00245;Name=archaetidylserine decarboxylase;locus_tag=GCA000012185_00245;product=archaetidylserine decarboxylase;Dbxref=GO:0004609,GO:0005886,GO:0006646,GO:0008654;gene=asd;Parent=GCA000012185_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0688,COG:I,KEGG:K01613,SO:0001217,UniParc:UPI000053E04A,UniRef:UniRef100_Q4QP27,UniRef:UniRef50_A7MMA5,UniRef:UniRef90_P43789;ec_number=4.1.1.65
contig_1	Pyrodigal	gene	238747	240117	.	-	.	ID=GCA000012185_00246_gene;locus_tag=GCA000012185_00246;gene=gorA
contig_1	Pyrodigal	CDS	238747	240117	.	-	0	ID=GCA000012185_00246;Name=glutathione-disulfide reductase;locus_tag=GCA000012185_00246;product=glutathione-disulfide reductase;Dbxref=GO:0004362,GO:0005829,GO:0006749,GO:0034599,GO:0045454,GO:0050660,GO:0050661;gene=gorA;Parent=GCA000012185_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00383,RefSeq:WP_011271908.1,SO:0001217,UniParc:UPI000053E04B,UniRef:UniRef100_Q4QP26,UniRef:UniRef50_P43783,UniRef:UniRef90_P43783;ec_number=1.8.1.7
contig_1	Pyrodigal	gene	240333	240932	.	-	.	ID=GCA000012185_00247_gene;locus_tag=GCA000012185_00247;gene=yajG
contig_1	Pyrodigal	CDS	240333	240932	.	-	0	ID=GCA000012185_00247;Name=putative lipoprotein HI_0162;locus_tag=GCA000012185_00247;product=putative lipoprotein HI_0162;Dbxref=GO:0005886;gene=yajG;Parent=GCA000012185_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3056,COG:S,KEGG:K07286,RefSeq:WP_005671163.1,SO:0001217,UniParc:UPI000005E88D,UniRef:UniRef100_A0A2R3FZS0,UniRef:UniRef50_P43782,UniRef:UniRef90_P43782
contig_1	Pyrodigal	gene	241026	241223	.	+	.	ID=GCA000012185_00248_gene;locus_tag=GCA000012185_00248;gene=bolA
contig_1	Pyrodigal	CDS	241026	241223	.	+	0	ID=GCA000012185_00248;Name=DNA-binding transcriptional regulator BolA;locus_tag=GCA000012185_00248;product=DNA-binding transcriptional regulator BolA;Dbxref=GO:0003677,GO:0005829,GO:0006351;gene=bolA;Parent=GCA000012185_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0271,COG:KT,SO:0001217,UniParc:UPI00003CDC1D,UniRef:UniRef100_A0A2R3G0R6,UniRef:UniRef50_P43780,UniRef:UniRef90_P43780
contig_1	Pyrodigal	gene	241628	242971	.	+	.	ID=GCA000012185_00249_gene;locus_tag=GCA000012185_00249;gene=nqrA
contig_1	Pyrodigal	CDS	241628	242971	.	+	0	ID=GCA000012185_00249;Name=Na(+)-translocating NADH-quinone reductase subunit A;locus_tag=GCA000012185_00249;product=Na(+)-translocating NADH-quinone reductase subunit A;Dbxref=GO:0006814,GO:0016655;gene=nqrA;Parent=GCA000012185_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1726,KEGG:K00346,RefSeq:WP_005671165.1,SO:0001217,UniParc:UPI000039A830,UniRef:UniRef100_Q4QP24,UniRef:UniRef50_Q56586,UniRef:UniRef90_P43955;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	242974	244209	.	+	.	ID=GCA000012185_00250_gene;locus_tag=GCA000012185_00250;gene=nqrB
contig_1	Pyrodigal	CDS	242974	244209	.	+	0	ID=GCA000012185_00250;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;locus_tag=GCA000012185_00250;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;Dbxref=GO:0005886,GO:0006814,GO:0010181,GO:0016020,GO:0016655,GO:0022904,GO:0055085;gene=nqrB;Parent=GCA000012185_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1805,RefSeq:WP_005653793.1,SO:0001217,UniParc:UPI000013043B,UniRef:UniRef100_O05011,UniRef:UniRef50_Q8ZBZ1,UniRef:UniRef90_O05011;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	244202	244936	.	+	.	ID=GCA000012185_00251_gene;locus_tag=GCA000012185_00251;gene=nqrC
contig_1	Pyrodigal	CDS	244202	244936	.	+	0	ID=GCA000012185_00251;Name=Na(+)-translocating NADH-quinone reductase subunit C;locus_tag=GCA000012185_00251;product=Na(+)-translocating NADH-quinone reductase subunit C;Dbxref=GO:0005886,GO:0006814,GO:0010181,GO:0016020,GO:0016655;gene=nqrC;Parent=GCA000012185_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2869,RefSeq:WP_005660827.1,SO:0001217,UniParc:UPI00003CDA1C,UniRef:UniRef100_A0A2S9RFM7,UniRef:UniRef50_Q56582,UniRef:UniRef90_P43957;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	244936	245562	.	+	.	ID=GCA000012185_00252_gene;locus_tag=GCA000012185_00252;gene=nqrD
contig_1	Pyrodigal	CDS	244936	245562	.	+	0	ID=GCA000012185_00252;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;locus_tag=GCA000012185_00252;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;Dbxref=GO:0005886,GO:0006814,GO:0016020,GO:0016655;gene=nqrD;Parent=GCA000012185_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1347,KEGG:K00349,RefSeq:WP_005648665.1,SO:0001217,UniParc:UPI000013044F,UniRef:UniRef100_P43958,UniRef:UniRef50_Q9HZK9,UniRef:UniRef90_P43958;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	245566	246162	.	+	.	ID=GCA000012185_00253_gene;locus_tag=GCA000012185_00253;gene=nqrE
contig_1	Pyrodigal	CDS	245566	246162	.	+	0	ID=GCA000012185_00253;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;locus_tag=GCA000012185_00253;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;Dbxref=GO:0005886,GO:0006814,GO:0009276,GO:0016655,GO:0022904;gene=nqrE;Parent=GCA000012185_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2209,KEGG:K00350,RefSeq:WP_005631374.1,SO:0001217,UniParc:UPI000039A82D,UniRef:UniRef100_Q4QP20,UniRef:UniRef50_Q9ZC45,UniRef:UniRef90_P71342;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	246175	247410	.	+	.	ID=GCA000012185_00254_gene;locus_tag=GCA000012185_00254;gene=nqrF
contig_1	Pyrodigal	CDS	246175	247410	.	+	0	ID=GCA000012185_00254;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;locus_tag=GCA000012185_00254;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;Dbxref=GO:0005886,GO:0006814,GO:0009055,GO:0016020,GO:0016655,GO:0046872,GO:0051537;gene=nqrF;Parent=GCA000012185_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2871,KEGG:K00351,RefSeq:WP_005660831.1,SO:0001217,UniParc:UPI000053E04C,UniRef:UniRef100_Q4QP19,UniRef:UniRef50_Q56584,UniRef:UniRef90_O05012;ec_number=7.2.1.1
contig_1	Pyrodigal	gene	247554	248594	.	+	.	ID=GCA000012185_00255_gene;locus_tag=GCA000012185_00255;gene=apbE
contig_1	Pyrodigal	CDS	247554	248594	.	+	0	ID=GCA000012185_00255;Name=FAD:protein FMN transferase;locus_tag=GCA000012185_00255;product=FAD:protein FMN transferase;Dbxref=GO:0005886,GO:0016740,GO:0046872;gene=apbE;Parent=GCA000012185_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1477,COG:HO,KEGG:K03734,RefSeq:WP_005660833.1,SO:0001217,UniParc:UPI000039A82C,UniRef:UniRef100_A0A0D0HR08,UniRef:UniRef50_P44550,UniRef:UniRef90_P44550;ec_number=2.7.1.180
contig_1	Pyrodigal	gene	248597	248857	.	+	.	ID=GCA000012185_00256_gene;locus_tag=GCA000012185_00256;gene=nqrM
contig_1	Pyrodigal	CDS	248597	248857	.	+	0	ID=GCA000012185_00256;Name=putative protein HI_0173;locus_tag=GCA000012185_00256;product=putative protein HI_0173;Dbxref=GO:0016020;gene=nqrM;Parent=GCA000012185_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG2991,KEGG:K05952,RefSeq:WP_005660836.1,SO:0001217,UniParc:UPI00003CDB2B,UniRef:UniRef100_A0A2R3FZU8,UniRef:UniRef50_P43960,UniRef:UniRef90_P43960
contig_1	Pyrodigal	gene	248974	250125	.	+	.	ID=GCA000012185_00257_gene;locus_tag=GCA000012185_00257;gene=mnmA
contig_1	Pyrodigal	CDS	248974	250125	.	+	0	ID=GCA000012185_00257;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000012185_00257;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0004808,GO:0005524,GO:0005737,GO:0006396,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000012185_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_005660840.1,SO:0001217,UniParc:UPI00014FD2C1,UniRef:UniRef100_Q4QP16,UniRef:UniRef50_P25745,UniRef:UniRef90_P44551;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	250169	250903	.	-	.	ID=GCA000012185_00258_gene;locus_tag=GCA000012185_00258;gene=pgeF
contig_1	Pyrodigal	CDS	250169	250903	.	-	0	ID=GCA000012185_00258;Name=peptidoglycan editing factor PgeF;locus_tag=GCA000012185_00258;product=peptidoglycan editing factor PgeF;Dbxref=GO:0004000,GO:0005507,GO:0016491,GO:0017061,GO:0046936;gene=pgeF;Parent=GCA000012185_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_005660843.1,SO:0001217,UniParc:UPI000053E04E,UniRef:UniRef100_A0A0D0IKJ0,UniRef:UniRef50_P44552,UniRef:UniRef90_P44552;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	250905	251879	.	-	.	ID=GCA000012185_00259_gene;locus_tag=GCA000012185_00259;gene=rluD
contig_1	Pyrodigal	CDS	250905	251879	.	-	0	ID=GCA000012185_00259;Name=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;locus_tag=GCA000012185_00259;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0005737,GO:0009451,GO:0009982,GO:0160140;gene=rluD;Parent=GCA000012185_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_005660845.1,SO:0001217,UniParc:UPI000053E04F,UniRef:UniRef100_A0A2S9S8W2,UniRef:UniRef50_P44445,UniRef:UniRef90_P44445;ec_number=5.4.99.23
contig_1	Pyrodigal	gene	251987	252775	.	+	.	ID=GCA000012185_00260_gene;locus_tag=GCA000012185_00260;gene=bamD
contig_1	Pyrodigal	CDS	251987	252775	.	+	0	ID=GCA000012185_00260;Name=Outer membrane protein assembly factor BamD;locus_tag=GCA000012185_00260;product=Outer membrane protein assembly factor BamD;Dbxref=GO:0043165,GO:0051205,GO:1990063;gene=bamD;Parent=GCA000012185_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4105,COG:M,RefSeq:WP_011271910.1,SO:0001217,UniParc:UPI00003CD7D2,UniRef:UniRef100_A0A2S9S8V2,UniRef:UniRef50_P44553,UniRef:UniRef90_P44553
contig_1	Pyrodigal	gene	252854	253336	.	-	.	ID=GCA000012185_00261_gene;locus_tag=GCA000012185_00261
contig_1	Pyrodigal	CDS	252854	253336	.	-	0	ID=GCA000012185_00261;Name=surface-adhesin protein E;locus_tag=GCA000012185_00261;product=surface-adhesin protein E;Dbxref=GO:0009279,GO:0009986;Parent=GCA000012185_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694109,RefSeq:WP_005660849.1,SO:0001217,UniParc:UPI00003CD7D3,UniRef:UniRef100_B5TYH9,UniRef:UniRef50_A4NBN9,UniRef:UniRef90_A4NBN9
contig_1	Pyrodigal	gene	253368	254108	.	-	.	ID=GCA000012185_00262_gene;locus_tag=GCA000012185_00262;gene=pflA
contig_1	Pyrodigal	CDS	253368	254108	.	-	0	ID=GCA000012185_00262;Name=pyruvate formate lyase 1-activating protein;locus_tag=GCA000012185_00262;product=pyruvate formate lyase 1-activating protein;Dbxref=GO:0005737,GO:0006006,GO:0043365,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000012185_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_005660851.1,SO:0001217,UniParc:UPI00003CD7D4,UniRef:UniRef100_A0A0D0IEC4,UniRef:UniRef50_P0A9N4,UniRef:UniRef90_P43751;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	254233	256545	.	-	.	ID=GCA000012185_00263_gene;locus_tag=GCA000012185_00263;gene=pflB
contig_1	Pyrodigal	CDS	254233	256545	.	-	0	ID=GCA000012185_00263;Name=formate C-acetyltransferase;locus_tag=GCA000012185_00263;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006006,GO:0008861;gene=pflB;Parent=GCA000012185_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_005653814.1,SO:0001217,UniParc:UPI000039A824,UniRef:UniRef100_P43753,UniRef:UniRef50_P09373,UniRef:UniRef90_P43753;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	256583	257437	.	-	.	ID=GCA000012185_00264_gene;locus_tag=GCA000012185_00264;gene=focA
contig_1	Pyrodigal	CDS	256583	257437	.	-	0	ID=GCA000012185_00264;Name=formate transporter FocA;locus_tag=GCA000012185_00264;product=formate transporter FocA;Dbxref=GO:0005886,GO:0015499,GO:0015724;gene=focA;Parent=GCA000012185_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,KEGG:K06212,RefSeq:WP_005694105.1,SO:0001217,UniParc:UPI000012AB36,UniRef:UniRef100_P43756,UniRef:UniRef50_P43756,UniRef:UniRef90_P43756
contig_1	Pyrodigal	gene	257942	258856	.	+	.	ID=GCA000012185_00265_gene;locus_tag=GCA000012185_00265;gene=nagK
contig_1	Pyrodigal	CDS	257942	258856	.	+	0	ID=GCA000012185_00265;Name=N-acetylglucosamine kinase;locus_tag=GCA000012185_00265;product=N-acetylglucosamine kinase;Dbxref=GO:0005524,GO:0006044,GO:0008270,GO:0009254,GO:0045127;gene=nagK;Parent=GCA000012185_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_011271911.1,SO:0001217,UniParc:UPI00003CD7D5,UniRef:UniRef100_Q4QP08,UniRef:UniRef50_P44554,UniRef:UniRef90_P44554;ec_number=2.7.1.59
contig_1	Pyrodigal	gene	259041	260480	.	+	.	ID=GCA000012185_00266_gene;locus_tag=GCA000012185_00266;gene=alsT
contig_1	Pyrodigal	CDS	259041	260480	.	+	0	ID=GCA000012185_00266;Name=putative transporter HI_0183;locus_tag=GCA000012185_00266;product=putative transporter HI_0183;Dbxref=GO:0005283,GO:0005886;gene=alsT;Parent=GCA000012185_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_005664316.1,SO:0001217,UniParc:UPI00014FC428,UniRef:UniRef100_A0A3E1QG19,UniRef:UniRef50_P44555,UniRef:UniRef90_P44555
contig_1	Pyrodigal	gene	260665	261492	.	-	.	ID=GCA000012185_00267_gene;locus_tag=GCA000012185_00267;gene=fghA
contig_1	Pyrodigal	CDS	260665	261492	.	-	0	ID=GCA000012185_00267;Name=S-formylglutathione hydrolase;locus_tag=GCA000012185_00267;product=S-formylglutathione hydrolase;Dbxref=GO:0018738,GO:0046294;gene=fghA;Parent=GCA000012185_00267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01070,RefSeq:WP_011271913.1,SO:0001217,UniParc:UPI00003CDCBB,UniRef:UniRef100_Q4QP06,UniRef:UniRef50_A0A3E1CDT4,UniRef:UniRef90_C0EJD9;ec_number=3.1.2.12
contig_1	Pyrodigal	gene	261501	262259	.	-	.	ID=GCA000012185_00268_gene;locus_tag=GCA000012185_00268
contig_1	Pyrodigal	CDS	261501	262259	.	-	0	ID=GCA000012185_00268;Name=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;locus_tag=GCA000012185_00268;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;Dbxref=GO:0004022,GO:0008270,GO:0051903;Parent=GCA000012185_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A447UFG2,UniRef:UniRef90_A0A346FVL3
contig_1	Pyrodigal	gene	262311	262637	.	-	.	ID=GCA000012185_00269_gene;locus_tag=GCA000012185_00269
contig_1	Pyrodigal	CDS	262311	262637	.	-	0	ID=GCA000012185_00269;Name=Alcohol dehydrogenase;locus_tag=GCA000012185_00269;product=Alcohol dehydrogenase;Parent=GCA000012185_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377B0L8,UniRef:UniRef90_A0A2X1PVZ5
contig_1	Pyrodigal	gene	262760	263167	.	+	.	ID=GCA000012185_00270_gene;locus_tag=GCA000012185_00270;gene=soxR
contig_1	Pyrodigal	CDS	262760	263167	.	+	0	ID=GCA000012185_00270;Name=putative HTH-type transcriptional regulator HI_0186;locus_tag=GCA000012185_00270;product=putative HTH-type transcriptional regulator HI_0186;Dbxref=GO:0003677,GO:0003700;gene=soxR;Parent=GCA000012185_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,KEGG:K21745,RefSeq:WP_005691542.1,SO:0001217,UniParc:UPI000013940F,UniRef:UniRef100_P44558,UniRef:UniRef50_P44558,UniRef:UniRef90_P44558
contig_1	Pyrodigal	gene	263385	263612	.	+	.	ID=GCA000012185_00271_gene;locus_tag=GCA000012185_00271;gene=tatA
contig_1	Pyrodigal	CDS	263385	263612	.	+	0	ID=GCA000012185_00271;Name=Sec-independent protein translocase protein TatA;locus_tag=GCA000012185_00271;product=Sec-independent protein translocase protein TatA;Dbxref=GO:0008320,GO:0033281,GO:0043953;gene=tatA;Parent=GCA000012185_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648696.1,SO:0001217,UniParc:UPI000039A81E,UniRef:UniRef100_A5UAW7,UniRef:UniRef50_P57046,UniRef:UniRef90_A5UAW7
contig_1	Pyrodigal	gene	263616	264176	.	+	.	ID=GCA000012185_00272_gene;locus_tag=GCA000012185_00272;gene=tatB
contig_1	Pyrodigal	CDS	263616	264176	.	+	0	ID=GCA000012185_00272;Name=Sec-independent protein translocase protein TatB;locus_tag=GCA000012185_00272;product=Sec-independent protein translocase protein TatB;Dbxref=GO:0008320,GO:0015628,GO:0016020,GO:0033281,GO:0043953;gene=tatB;Parent=GCA000012185_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,KEGG:K03117,RefSeq:WP_005688082.1,SO:0001217,UniParc:UPI000053E052,UniRef:UniRef100_Q4QP03,UniRef:UniRef50_P57047,UniRef:UniRef90_P57047
contig_1	Pyrodigal	gene	264186	264956	.	+	.	ID=GCA000012185_00273_gene;locus_tag=GCA000012185_00273;gene=tatC
contig_1	Pyrodigal	CDS	264186	264956	.	+	0	ID=GCA000012185_00273;Name=twin-arginine translocase subunit TatC;locus_tag=GCA000012185_00273;product=twin-arginine translocase subunit TatC;Dbxref=GO:0005886,GO:0009977,GO:0015628,GO:0033281,GO:0043953,GO:0065002;gene=tatC;Parent=GCA000012185_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,RefSeq:WP_005658522.1,SO:0001217,UniParc:UPI000053E053,UniRef:UniRef100_A0A0H3PBA9,UniRef:UniRef50_P69423,UniRef:UniRef90_P44560
contig_1	Pyrodigal	gene	265317	266666	.	+	.	ID=GCA000012185_00274_gene;locus_tag=GCA000012185_00274;gene=gdhA
contig_1	Pyrodigal	CDS	265317	266666	.	+	0	ID=GCA000012185_00274;Name=NADP-specific glutamate dehydrogenase;locus_tag=GCA000012185_00274;product=NADP-specific glutamate dehydrogenase;Dbxref=GO:0004354,GO:0005737,GO:0005829,GO:0006520,GO:0006537,GO:0016639;gene=gdhA;Parent=GCA000012185_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_005688084.1,SO:0001217,UniParc:UPI000053E054,UniRef:UniRef100_A0A2R3GFR2,UniRef:UniRef50_P00370,UniRef:UniRef90_P43793;ec_number=1.4.1.4
contig_1	Pyrodigal	gene	266774	267214	.	-	.	ID=GCA000012185_00275_gene;locus_tag=GCA000012185_00275;gene=fur
contig_1	Pyrodigal	CDS	266774	267214	.	-	0	ID=GCA000012185_00275;Name=ferric iron uptake transcriptional regulator;locus_tag=GCA000012185_00275;product=ferric iron uptake transcriptional regulator;Dbxref=GO:0000976,GO:0003700,GO:0005829,GO:0006355,GO:0008270,GO:0045892,GO:1900705;gene=fur;Parent=GCA000012185_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_005658517.1,SO:0001217,UniParc:UPI000053E055,UniRef:UniRef100_A0A0H3PK97,UniRef:UniRef50_P0A9A9,UniRef:UniRef90_P44561
contig_1	Pyrodigal	gene	267243	267767	.	-	.	ID=GCA000012185_00276_gene;locus_tag=GCA000012185_00276;gene=fldA
contig_1	Pyrodigal	CDS	267243	267767	.	-	0	ID=GCA000012185_00276;Name=flavodoxin FldA;locus_tag=GCA000012185_00276;product=flavodoxin FldA;Dbxref=GO:0009055,GO:0010181;gene=fldA;Parent=GCA000012185_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_005648709.1,SO:0001217,UniParc:UPI00000378E5,UniRef:UniRef100_P44562,UniRef:UniRef50_Q8ZQX1,UniRef:UniRef90_P44562
contig_1	Pyrodigal	gene	267864	268646	.	-	.	ID=GCA000012185_00277_gene;locus_tag=GCA000012185_00277;gene=menH
contig_1	Pyrodigal	CDS	267864	268646	.	-	0	ID=GCA000012185_00277;Name=Putative esterase/lipase HI_0193;locus_tag=GCA000012185_00277;product=Putative esterase/lipase HI_0193;Dbxref=GO:0052689;gene=menH;Parent=GCA000012185_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_038440879.1,SO:0001217,UniParc:UPI0002F1F7D6,UniRef:UniRef100_Q4QNZ8,UniRef:UniRef50_Q57427,UniRef:UniRef90_Q57427;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	268717	269322	.	+	.	ID=GCA000012185_00278_gene;locus_tag=GCA000012185_00278;gene=seqA
contig_1	Pyrodigal	CDS	268717	269322	.	+	0	ID=GCA000012185_00278;Name=replication initiation negative regulator SeqA;locus_tag=GCA000012185_00278;product=replication initiation negative regulator SeqA;Dbxref=GO:0003677,GO:0005737,GO:0006355,GO:0032297;gene=seqA;Parent=GCA000012185_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3057,COG:L,KEGG:K03645,RefSeq:WP_011271915.1,SO:0001217,UniParc:UPI00003CD980,UniRef:UniRef100_A0A0C5F0K9,UniRef:UniRef50_Q65U90,UniRef:UniRef90_P44564
contig_1	Pyrodigal	gene	269325	270683	.	+	.	ID=GCA000012185_00279_gene;locus_tag=GCA000012185_00279;gene=menE
contig_1	Pyrodigal	CDS	269325	270683	.	+	0	ID=GCA000012185_00279;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000012185_00279;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA000012185_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_011271916.1,SO:0001217,UniParc:UPI00003CD97F,UniRef:UniRef100_A0A2R3G0U4,UniRef:UniRef50_P44565,UniRef:UniRef90_P44565;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	270726	274049	.	+	.	ID=GCA000012185_00280_gene;locus_tag=GCA000012185_00280;gene=mscK
contig_1	Pyrodigal	CDS	270726	274049	.	+	0	ID=GCA000012185_00280;Name=mechanosensitive channel MscK;locus_tag=GCA000012185_00280;product=mechanosensitive channel MscK;Dbxref=GO:0005886,GO:0008381,GO:0009992,GO:0016020,GO:0055085;gene=mscK;Parent=GCA000012185_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3264,COG:M,KEGG:K05802,RefSeq:WP_038440877.1,SO:0001217,UniParc:UPI000318FB00,UniRef:UniRef100_A0A346JUV3,UniRef:UniRef50_Q57362,UniRef:UniRef90_Q57362
contig_1	Pyrodigal	gene	274059	275132	.	+	.	ID=GCA000012185_00281_gene;locus_tag=GCA000012185_00281;gene=aroC
contig_1	Pyrodigal	CDS	274059	275132	.	+	0	ID=GCA000012185_00281;Name=chorismate synthase;locus_tag=GCA000012185_00281;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA000012185_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_011271918.1,SO:0001217,UniParc:UPI000053E058,UniRef:UniRef100_Q4QNZ4,UniRef:UniRef50_P43875,UniRef:UniRef90_P43875;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	275305	276165	.	+	.	ID=GCA000012185_00282_gene;locus_tag=GCA000012185_00282;gene=mepA
contig_1	Pyrodigal	CDS	275305	276165	.	+	0	ID=GCA000012185_00282;Name=penicillin-insensitive murein endopeptidase;locus_tag=GCA000012185_00282;product=penicillin-insensitive murein endopeptidase;Dbxref=GO:0004252,GO:0006508,GO:0008237,GO:0030288,GO:0046872;gene=mepA;Parent=GCA000012185_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3770,COG:M,KEGG:K07261,RefSeq:WP_011271919.1,SO:0001217,UniParc:UPI00003CDAAB,UniRef:UniRef100_Q4QNZ3,UniRef:UniRef50_P44566,UniRef:UniRef90_P44566;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	276183	276950	.	+	.	ID=GCA000012185_00283_gene;locus_tag=GCA000012185_00283;gene=tauE
contig_1	Pyrodigal	CDS	276183	276950	.	+	0	ID=GCA000012185_00283;Name=putative membrane transporter protein HI_0198;locus_tag=GCA000012185_00283;product=putative membrane transporter protein HI_0198;Dbxref=GO:0005886;gene=tauE;Parent=GCA000012185_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_005648731.1,SO:0001217,UniParc:UPI000039ADD5,UniRef:UniRef100_A0A2S9RTI8,UniRef:UniRef50_P46490,UniRef:UniRef90_P46490
contig_1	Pyrodigal	gene	276997	277953	.	+	.	ID=GCA000012185_00284_gene;locus_tag=GCA000012185_00284;gene=msbB
contig_1	Pyrodigal	CDS	276997	277953	.	+	0	ID=GCA000012185_00284;Name=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;locus_tag=GCA000012185_00284;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;Dbxref=GO:0005886,GO:0009103,GO:0009276,GO:0016020,GO:0016747,GO:0036104;gene=msbB;Parent=GCA000012185_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1560,COG:I,KEGG:K02517,RefSeq:WP_011271920.1,SO:0001217,UniParc:UPI00003CDAAC,UniRef:UniRef100_Q4QNZ1,UniRef:UniRef50_P44567,UniRef:UniRef90_P44567,VFDB:VFC0258,VFDB:VFG013254;ec_number=2.3.1.243
contig_1	Pyrodigal	gene	278080	279051	.	+	.	ID=GCA000012185_00285_gene;locus_tag=GCA000012185_00285;gene=selD
contig_1	Pyrodigal	CDS	278080	279051	.	+	0	ID=GCA000012185_00285;Name=selenide%2C water dikinase SelD;locus_tag=GCA000012185_00285;product=selenide%2C water dikinase SelD;Dbxref=GO:0000287,GO:0004756,GO:0005524,GO:0005737,GO:0016260;gene=selD;Parent=GCA000012185_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0709,COG:E,KEGG:K01008,SO:0001217,UniParc:UPI00003CDB53,UniRef:UniRef100_A0AAJ8WBQ6,UniRef:UniRef50_P16456,UniRef:UniRef90_P43911;ec_number=2.7.9.3
contig_1	Pyrodigal	gene	279160	279510	.	-	.	ID=GCA000012185_00286_gene;locus_tag=GCA000012185_00286;gene=rplS
contig_1	Pyrodigal	CDS	279160	279510	.	-	0	ID=GCA000012185_00286;Name=50S ribosomal protein L19;locus_tag=GCA000012185_00286;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000012185_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_005648735.1,SO:0001217,UniParc:UPI00000378E8,UniRef:UniRef100_P44357,UniRef:UniRef50_Q9CLE0,UniRef:UniRef90_Q9CLE0
contig_1	Pyrodigal	gene	279547	280287	.	-	.	ID=GCA000012185_00287_gene;locus_tag=GCA000012185_00287;gene=trmD
contig_1	Pyrodigal	CDS	279547	280287	.	-	0	ID=GCA000012185_00287;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000012185_00287;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0030488,GO:0052906;gene=trmD;Parent=GCA000012185_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,KEGG:K00554,RefSeq:WP_011271922.1,SO:0001217,UniParc:UPI000053E059,UniRef:UniRef100_Q4QNY8,UniRef:UniRef50_P43912,UniRef:UniRef90_P43912;ec_number=2.1.1.228
contig_1	Pyrodigal	gene	280325	280852	.	-	.	ID=GCA000012185_00288_gene;locus_tag=GCA000012185_00288;gene=rimM
contig_1	Pyrodigal	CDS	280325	280852	.	-	0	ID=GCA000012185_00288;Name=ribosome maturation factor RimM;locus_tag=GCA000012185_00288;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000012185_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_005658489.1,SO:0001217,UniParc:UPI000053E05A,UniRef:UniRef100_Q4QNY7,UniRef:UniRef50_P0A7X6,UniRef:UniRef90_Q4QNY7
contig_1	Pyrodigal	gene	280897	281145	.	-	.	ID=GCA000012185_00289_gene;locus_tag=GCA000012185_00289;gene=rpsP
contig_1	Pyrodigal	CDS	280897	281145	.	-	0	ID=GCA000012185_00289;Name=30S ribosomal protein S16;locus_tag=GCA000012185_00289;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA000012185_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_005653865.1,SO:0001217,UniParc:UPI0000134D3B,UniRef:UniRef100_P44382,UniRef:UniRef50_P44382,UniRef:UniRef90_P44382
contig_1	Pyrodigal	gene	281437	282210	.	+	.	ID=GCA000012185_00290_gene;locus_tag=GCA000012185_00290
contig_1	Pyrodigal	CDS	281437	282210	.	+	0	ID=GCA000012185_00290;Name=putative protein HI_0205;locus_tag=GCA000012185_00290;product=putative protein HI_0205;Parent=GCA000012185_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648742.1,SO:0001217,UniParc:UPI000039ADDB,UniRef:UniRef100_Q4QNY5,UniRef:UniRef50_P43963,UniRef:UniRef90_P43963
contig_1	Pyrodigal	gene	282233	284044	.	+	.	ID=GCA000012185_00291_gene;locus_tag=GCA000012185_00291;gene=nadN
contig_1	Pyrodigal	CDS	282233	284044	.	+	0	ID=GCA000012185_00291;Name=NAD nucleotidase;locus_tag=GCA000012185_00291;product=NAD nucleotidase;Dbxref=GO:0000166,GO:0000210,GO:0008253,GO:0008768,GO:0009166,GO:0030288,GO:0046872,GO:0106411;gene=nadN;Parent=GCA000012185_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_005653867.1,SO:0001217,UniParc:UPI00003CD985,UniRef:UniRef100_A0A0H3PC20,UniRef:UniRef50_P44569,UniRef:UniRef90_P44569;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	284329	284871	.	+	.	ID=GCA000012185_00292_gene;locus_tag=GCA000012185_00292;gene=aroK
contig_1	Pyrodigal	CDS	284329	284871	.	+	0	ID=GCA000012185_00292;Name=shikimate kinase AroK;locus_tag=GCA000012185_00292;product=shikimate kinase AroK;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroK;Parent=GCA000012185_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_005658483.1,SO:0001217,UniParc:UPI000053E05C,UniRef:UniRef100_Q4QNY3,UniRef:UniRef50_Q65R34,UniRef:UniRef90_P43880;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	284891	285979	.	+	.	ID=GCA000012185_00293_gene;locus_tag=GCA000012185_00293;gene=aroB
contig_1	Pyrodigal	CDS	284891	285979	.	+	0	ID=GCA000012185_00293;Name=3-dehydroquinate synthase;locus_tag=GCA000012185_00293;product=3-dehydroquinate synthase;Dbxref=GO:0000166,GO:0003856,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0046872;gene=aroB;Parent=GCA000012185_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_005688099.1,SO:0001217,UniParc:UPI000053E05D,UniRef:UniRef100_Q4QNY2,UniRef:UniRef50_Q9KNV2,UniRef:UniRef90_P43879;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	285981	286841	.	+	.	ID=GCA000012185_00294_gene;locus_tag=GCA000012185_00294;gene=dam
contig_1	Pyrodigal	CDS	285981	286841	.	+	0	ID=GCA000012185_00294;Name=DNA adenine methylase;locus_tag=GCA000012185_00294;product=DNA adenine methylase;Dbxref=GO:0006260,GO:0006298,GO:0009007,GO:0009307,GO:0032259,GO:0043565,GO:1904047;gene=dam;Parent=GCA000012185_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0338,COG:L,KEGG:K06223,RefSeq:WP_011271924.1,SO:0001217,UniParc:UPI00003CDA9F,UniRef:UniRef100_A0A2R3FVT9,UniRef:UniRef50_P44431,UniRef:UniRef90_P44431;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	287932	288657	.	-	.	ID=GCA000012185_00295_gene;locus_tag=GCA000012185_00295;gene=pgpB
contig_1	Pyrodigal	CDS	287932	288657	.	-	0	ID=GCA000012185_00295;Name=Phosphatidylglycerophosphatase B;locus_tag=GCA000012185_00295;product=Phosphatidylglycerophosphatase B;Dbxref=GO:0000810,GO:0005886,GO:0006655,GO:0008195,GO:0008962,GO:0009279,GO:0009395,GO:0050380;gene=pgpB;Parent=GCA000012185_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,KEGG:K01096,RefSeq:WP_011271925.1,SO:0001217,UniParc:UPI000053E05E,UniRef:UniRef100_A0A2R3FZW6,UniRef:UniRef50_P44570,UniRef:UniRef90_P44570;ec_number=3.1.3.27
contig_1	Pyrodigal	gene	288727	289377	.	+	.	ID=GCA000012185_00296_gene;locus_tag=GCA000012185_00296;gene=ribA
contig_1	Pyrodigal	CDS	288727	289377	.	+	0	ID=GCA000012185_00296;Name=GTP cyclohydrolase-2;locus_tag=GCA000012185_00296;product=GTP cyclohydrolase-2;Dbxref=GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0009231;gene=ribA;Parent=GCA000012185_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,RefSeq:WP_005629111.1,SO:0001217,UniParc:UPI000012B2D0,UniRef:UniRef100_P44571,UniRef:UniRef50_P0A7I7,UniRef:UniRef90_P44571;ec_number=3.5.4.25
contig_1	Pyrodigal	gene	289693	291237	.	-	.	ID=GCA000012185_00297_gene;locus_tag=GCA000012185_00297;gene=oppA
contig_1	Pyrodigal	CDS	289693	291237	.	-	0	ID=GCA000012185_00297;Name=Putative binding protein HI_0213;locus_tag=GCA000012185_00297;product=Putative binding protein HI_0213;Dbxref=GO:0015833,GO:0030288,GO:0043190,GO:1904680;gene=oppA;Parent=GCA000012185_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_011271926.1,SO:0001217,UniParc:UPI000053E05F,UniRef:UniRef100_Q4QNX7,UniRef:UniRef50_P44572,UniRef:UniRef90_P44572
contig_1	Pyrodigal	gene	291230	291592	.	-	.	ID=GCA000012185_00298_gene;locus_tag=GCA000012185_00298;gene=ybaN
contig_1	Pyrodigal	CDS	291230	291592	.	-	0	ID=GCA000012185_00298;Name=Inner membrane protein;locus_tag=GCA000012185_00298;product=Inner membrane protein;gene=ybaN;Parent=GCA000012185_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_005653887.1,SO:0001217,UniParc:UPI00003CD953,UniRef:UniRef100_Q4QNX6,UniRef:UniRef50_A0A1B8PFX2,UniRef:UniRef90_A0A1B8PFX2
contig_1	Pyrodigal	gene	291711	293756	.	+	.	ID=GCA000012185_00299_gene;locus_tag=GCA000012185_00299;gene=prlC
contig_1	Pyrodigal	CDS	291711	293756	.	+	0	ID=GCA000012185_00299;Name=oligopeptidase A;locus_tag=GCA000012185_00299;product=oligopeptidase A;Dbxref=GO:0004222,GO:0005737,GO:0006508,GO:0006518,GO:0046872;gene=prlC;Parent=GCA000012185_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0339,COG:O,KEGG:K01414,SO:0001217,UniParc:UPI000053E060,UniRef:UniRef100_Q4QNX5,UniRef:UniRef50_P44573,UniRef:UniRef90_P44573;ec_number=3.4.24.70
contig_1	Pyrodigal	gene	293988	295532	.	+	.	ID=GCA000012185_00300_gene;locus_tag=GCA000012185_00300;gene=hsdM
contig_1	Pyrodigal	CDS	293988	295532	.	+	0	ID=GCA000012185_00300;Name=type I restriction-modification system subunit M;locus_tag=GCA000012185_00300;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;gene=hsdM;Parent=GCA000012185_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,KEGG:K03427,RefSeq:WP_005688104.1,SO:0001217,UniParc:UPI000053E061,UniRef:UniRef100_Q4QNX4,UniRef:UniRef50_P10484,UniRef:UniRef90_E6KXZ2;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	295617	296789	.	+	.	ID=GCA000012185_00301_gene;locus_tag=GCA000012185_00301
contig_1	Pyrodigal	CDS	295617	296789	.	+	0	ID=GCA000012185_00301;Name=Restriction endonuclease subunit S;locus_tag=GCA000012185_00301;product=Restriction endonuclease subunit S;Parent=GCA000012185_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_005688105.1,SO:0001217,UniParc:UPI000053E062,UniRef:UniRef100_A0A3E1QGI5,UniRef:UniRef50_P71344,UniRef:UniRef90_A0A3E1QGI5;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	296791	297945	.	+	.	ID=GCA000012185_00302_gene;locus_tag=GCA000012185_00302
contig_1	Pyrodigal	CDS	296791	297945	.	+	0	ID=GCA000012185_00302;Name=Anticodon nuclease;locus_tag=GCA000012185_00302;product=Anticodon nuclease;Parent=GCA000012185_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688106.1,SO:0001217,UniParc:UPI000053E063,UniRef:UniRef100_Q4QNX2,UniRef:UniRef50_A0A0P1F9N8,UniRef:UniRef90_E6KXZ5
contig_1	Pyrodigal	gene	297948	298946	.	+	.	ID=GCA000012185_00303_gene;locus_tag=GCA000012185_00303;gene=rhuM
contig_1	Pyrodigal	CDS	297948	298946	.	+	0	ID=GCA000012185_00303;Name=Toxin-antitoxin system%2C toxin component%2C Fic family;locus_tag=GCA000012185_00303;product=Toxin-antitoxin system%2C toxin component%2C Fic family;gene=rhuM;Parent=GCA000012185_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3943,COG:S,RefSeq:WP_011271928.1,SO:0001217,UniParc:UPI000053E064,UniRef:UniRef100_Q4QNX1,UniRef:UniRef50_C5ZW99,UniRef:UniRef90_U1SDR6
contig_1	Pyrodigal	gene	298957	302040	.	+	.	ID=GCA000012185_00304_gene;locus_tag=GCA000012185_00304
contig_1	Pyrodigal	CDS	298957	302040	.	+	0	ID=GCA000012185_00304;Name=Type I restriction enzyme endonuclease subunit;locus_tag=GCA000012185_00304;product=Type I restriction enzyme endonuclease subunit;Parent=GCA000012185_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0610,COG:V,KEGG:K01153,RefSeq:WP_011271929.1,SO:0001217,UniParc:UPI00003CD941,UniRef:UniRef100_A0AAJ8WRE1,UniRef:UniRef50_A0A0M1GJN2,UniRef:UniRef90_A0A0M1GJN2;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	302187	302816	.	-	.	ID=GCA000012185_00305_gene;locus_tag=GCA000012185_00305;gene=ykgB
contig_1	Pyrodigal	CDS	302187	302816	.	-	0	ID=GCA000012185_00305;Name=putative protein HI_0219;locus_tag=GCA000012185_00305;product=putative protein HI_0219;Dbxref=GO:0005886,GO:1901530;gene=ykgB;Parent=GCA000012185_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3059,COG:V,KEGG:K21741,RefSeq:WP_005658466.1,SO:0001217,UniParc:UPI000019B2DF,UniRef:UniRef100_P44577,UniRef:UniRef50_P44577,UniRef:UniRef90_P44577
contig_1	Pyrodigal	gene	303030	304826	.	-	.	ID=GCA000012185_00306_gene;locus_tag=GCA000012185_00306;gene=hPtr
contig_1	Pyrodigal	CDS	303030	304826	.	-	0	ID=GCA000012185_00306;Name=Aerobic respiration control sensor protein;locus_tag=GCA000012185_00306;product=Aerobic respiration control sensor protein;gene=hPtr;Parent=GCA000012185_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2198,COG:T,RefSeq:WP_038440855.1,SO:0001217,UniParc:UPI00003CD9DA,UniRef:UniRef100_Q4QNW8,UniRef:UniRef50_A0A249A0L4,UniRef:UniRef90_Q4QNW8
contig_1	Pyrodigal	gene	304940	305527	.	-	.	ID=GCA000012185_00307_gene;locus_tag=GCA000012185_00307;gene=udg4
contig_1	Pyrodigal	CDS	304940	305527	.	-	0	ID=GCA000012185_00307;Name=putative protein HI_0220-2;locus_tag=GCA000012185_00307;product=putative protein HI_0220-2;gene=udg4;Parent=GCA000012185_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1573,COG:L,RefSeq:WP_038440853.1,SO:0001217,UniParc:UPI00003CD9DB,UniRef:UniRef100_Q4QNW7,UniRef:UniRef50_O86222,UniRef:UniRef90_O86222
contig_1	Infernal	gene	305788	305903	.	-	.	ID=GCA000012185_00308_gene;locus_tag=GCA000012185_00308;gene=rrf
contig_1	Infernal	rRNA	305788	305903	2.7e-14	-	.	ID=GCA000012185_00308;Name=5S ribosomal RNA;locus_tag=GCA000012185_00308;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00308_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	306146	309261	.	-	.	ID=GCA000012185_00309_gene;locus_tag=GCA000012185_00309;gene=rrl
contig_1	Infernal	rRNA	306146	309261	3e-06	-	.	ID=GCA000012185_00309;Name=23S ribosomal RNA;locus_tag=GCA000012185_00309;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_00309_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	309531	309606	.	-	.	ID=GCA000012185_00310_gene;locus_tag=GCA000012185_00310;gene=trnE
contig_1	tRNAscan-SE	tRNA	309531	309606	.	-	.	ID=GCA000012185_00310;Name=tRNA-Glu(ttc);locus_tag=GCA000012185_00310;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000012185_00310_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	309738	311277	.	-	.	ID=GCA000012185_00311_gene;locus_tag=GCA000012185_00311;gene=rrs
contig_1	Infernal	rRNA	309738	311277	7.6e-47	-	.	ID=GCA000012185_00311;Name=16S ribosomal RNA;locus_tag=GCA000012185_00311;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_00311_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	311636	312541	.	-	.	ID=GCA000012185_00312_gene;locus_tag=GCA000012185_00312;gene=birA
contig_1	Pyrodigal	CDS	311636	312541	.	-	0	ID=GCA000012185_00312;Name=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;locus_tag=GCA000012185_00312;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;Dbxref=GO:0003677,GO:0004077,GO:0005524,GO:0005737,GO:0006355,GO:0036211;gene=birA;Parent=GCA000012185_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1654,COG:K,KEGG:K03524,RefSeq:WP_041174729.1,SO:0001217,UniParc:UPI00031EB745,UniRef:UniRef100_Q4QNW6,UniRef:UniRef50_P46363,UniRef:UniRef90_P46363;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	312671	314137	.	+	.	ID=GCA000012185_00313_gene;locus_tag=GCA000012185_00313;gene=guaB
contig_1	Pyrodigal	CDS	312671	314137	.	+	0	ID=GCA000012185_00313;Name=IMP dehydrogenase;locus_tag=GCA000012185_00313;product=IMP dehydrogenase;Dbxref=GO:0003938,GO:0006164;gene=guaB;Parent=GCA000012185_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0517,COG:T,RefSeq:WP_011271933.1,SO:0001217,UniParc:UPI000053E068,UniRef:UniRef100_Q4QNW5,UniRef:UniRef50_P0ADG7,UniRef:UniRef90_A3MZV9;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	314247	315818	.	+	.	ID=GCA000012185_00314_gene;locus_tag=GCA000012185_00314;gene=guaA
contig_1	Pyrodigal	CDS	314247	315818	.	+	0	ID=GCA000012185_00314;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000012185_00314;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA000012185_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,KEGG:K01951,RefSeq:WP_005648785.1,SO:0001217,UniParc:UPI000039ADEA,UniRef:UniRef100_Q4QNW4,UniRef:UniRef50_Q9RT91,UniRef:UniRef90_P44335;ec_number=6.3.5.2
contig_1	Pyrodigal	gene	315880	316770	.	-	.	ID=GCA000012185_00315_gene;locus_tag=GCA000012185_00315;gene=rarD
contig_1	Pyrodigal	CDS	315880	316770	.	-	0	ID=GCA000012185_00315;Name=EamA family transporter RarD;locus_tag=GCA000012185_00315;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA000012185_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_038440848.1,SO:0001217,UniParc:UPI000300756C,UniRef:UniRef100_A0A346K9V5,UniRef:UniRef50_P44579,UniRef:UniRef90_P44579
contig_1	Pyrodigal	gene	316890	317351	.	+	.	ID=GCA000012185_00316_gene;locus_tag=GCA000012185_00316;gene=lrp
contig_1	Pyrodigal	CDS	316890	317351	.	+	0	ID=GCA000012185_00316;Name=putative HTH-type transcriptional regulator HI_0224;locus_tag=GCA000012185_00316;product=putative HTH-type transcriptional regulator HI_0224;Dbxref=GO:0005829,GO:0043200,GO:0043565;gene=lrp;Parent=GCA000012185_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005648788.1,SO:0001217,UniParc:UPI000039ADEC,UniRef:UniRef100_Q4QNW2,UniRef:UniRef50_P44580,UniRef:UniRef90_P44580
contig_1	Pyrodigal	gene	317390	318592	.	-	.	ID=GCA000012185_00317_gene;locus_tag=GCA000012185_00317;gene=nhaA
contig_1	Pyrodigal	CDS	317390	318592	.	-	0	ID=GCA000012185_00317;Name=Na+/H+ antiporter NhaA;locus_tag=GCA000012185_00317;product=Na+/H+ antiporter NhaA;Dbxref=GO:0005886,GO:0006814,GO:0006885,GO:0015385,GO:0016020;gene=nhaA;Parent=GCA000012185_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3004,COG:CP,KEGG:K03313,RefSeq:WP_005660593.1,SO:0001217,UniParc:UPI000053E06B,UniRef:UniRef100_Q4QNW1,UniRef:UniRef50_A8G9L0,UniRef:UniRef90_P44581
contig_1	Pyrodigal	gene	318780	320090	.	+	.	ID=GCA000012185_00318_gene;locus_tag=GCA000012185_00318;gene=brnQ
contig_1	Pyrodigal	CDS	318780	320090	.	+	0	ID=GCA000012185_00318;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000012185_00318;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015658,GO:0015803,GO:0015818,GO:0015820,GO:0015829,GO:0016020;gene=brnQ;Parent=GCA000012185_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_005648793.1,SO:0001217,UniParc:UPI000045EA60,UniRef:UniRef100_A0A2R3FZZ3,UniRef:UniRef50_P71345,UniRef:UniRef90_P71345
contig_1	Pyrodigal	gene	320198	320665	.	-	.	ID=GCA000012185_00319_gene;locus_tag=GCA000012185_00319;gene=nanQ
contig_1	Pyrodigal	CDS	320198	320665	.	-	0	ID=GCA000012185_00319;Name=N-acetylneuraminate anomerase;locus_tag=GCA000012185_00319;product=N-acetylneuraminate anomerase;Dbxref=GO:0005829,GO:0006974,GO:0046872;gene=nanQ;Parent=GCA000012185_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2731,COG:G,KEGG:K19334,RefSeq:WP_005660595.1,SO:0001217,UniParc:UPI000013B1DE,UniRef:UniRef100_P44583,UniRef:UniRef50_P44583,UniRef:UniRef90_P44583
contig_1	Pyrodigal	gene	320692	321138	.	-	.	ID=GCA000012185_00320_gene;locus_tag=GCA000012185_00320
contig_1	Pyrodigal	CDS	320692	321138	.	-	0	ID=GCA000012185_00320;Name=putative protein HI_0228;locus_tag=GCA000012185_00320;product=putative protein HI_0228;Parent=GCA000012185_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005660599.1,SO:0001217,UniParc:UPI00003CD99C,UniRef:UniRef100_A0A2R3FVF8,UniRef:UniRef50_P43966,UniRef:UniRef90_A0A2R3FVF8
contig_1	Pyrodigal	gene	321411	323540	.	+	.	ID=GCA000012185_00321_gene;locus_tag=GCA000012185_00321;gene=pnp
contig_1	Pyrodigal	CDS	321411	323540	.	+	0	ID=GCA000012185_00321;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000012185_00321;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA000012185_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_005660601.1,SO:0001217,UniParc:UPI000053E06C,UniRef:UniRef100_Q4QNV7,UniRef:UniRef50_Q0I2T0,UniRef:UniRef90_Q0I2T0;ec_number=2.7.7.8
contig_1	Pyrodigal	gene	323622	324566	.	+	.	ID=GCA000012185_00322_gene;locus_tag=GCA000012185_00322;gene=nlpI
contig_1	Pyrodigal	CDS	323622	324566	.	+	0	ID=GCA000012185_00322;Name=lipoprotein NlpI;locus_tag=GCA000012185_00322;product=lipoprotein NlpI;Dbxref=GO:0005515,GO:0005886,GO:0009279,GO:0046813,GO:0051301;gene=nlpI;Parent=GCA000012185_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4785,COG:M,RefSeq:WP_011271936.1,SO:0001217,UniParc:UPI000053E06D,UniRef:UniRef100_Q4QNV6,UniRef:UniRef50_P44585,UniRef:UniRef90_P44585
contig_1	Pyrodigal	gene	324686	326527	.	+	.	ID=GCA000012185_00323_gene;locus_tag=GCA000012185_00323;gene=deaD
contig_1	Pyrodigal	CDS	324686	326527	.	+	0	ID=GCA000012185_00323;Name=ATP-dependent RNA helicase DeaD;locus_tag=GCA000012185_00323;product=ATP-dependent RNA helicase DeaD;Dbxref=GO:0000027,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0009409,GO:0016887,GO:0033592,GO:0061775,GO:0070417,GO:0140584,GO:0140665,GO:0140849;gene=deaD;Parent=GCA000012185_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_011271937.1,SO:0001217,UniParc:UPI000053E06E,UniRef:UniRef100_Q4QNV5,UniRef:UniRef50_P0A9P6,UniRef:UniRef90_P44586;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	326645	328093	.	+	.	ID=GCA000012185_00324_gene;locus_tag=GCA000012185_00324;gene=mltF
contig_1	Pyrodigal	CDS	326645	328093	.	+	0	ID=GCA000012185_00324;Name=membrane-bound lytic murein transglycosylase MltF;locus_tag=GCA000012185_00324;product=membrane-bound lytic murein transglycosylase MltF;Dbxref=GO:0000270,GO:0008933,GO:0009253,GO:0009279,GO:0016020,GO:0016998,GO:0071555;gene=mltF;Parent=GCA000012185_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4623,COG:MT,RefSeq:WP_038440844.1,SO:0001217,UniParc:UPI000183CB80,UniRef:UniRef100_Q4QNV4,UniRef:UniRef50_P44587,UniRef:UniRef90_P44587;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	328098	328250	.	+	.	ID=GCA000012185_00325_gene;locus_tag=GCA000012185_00325
contig_1	Pyrodigal	CDS	328098	328250	.	+	0	ID=GCA000012185_00325;Name=putative protein HI_0233;locus_tag=GCA000012185_00325;product=putative protein HI_0233;Parent=GCA000012185_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648810.1,SO:0001217,UniParc:UPI00001394C7,UniRef:UniRef100_P43967,UniRef:UniRef50_P43967,UniRef:UniRef90_P43967
contig_1	Pyrodigal	gene	328384	328680	.	-	.	ID=GCA000012185_00326_gene;locus_tag=GCA000012185_00326
contig_1	Pyrodigal	CDS	328384	328680	.	-	0	ID=GCA000012185_00326;Name=Dithiol-disulfide isomerase;locus_tag=GCA000012185_00326;product=Dithiol-disulfide isomerase;Parent=GCA000012185_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648811.1,SO:0001217,UniParc:UPI000045EA64,UniRef:UniRef100_A0A1Q5Y1V4,UniRef:UniRef50_Q9CLT1,UniRef:UniRef90_H1LMS8
contig_1	Pyrodigal	gene	328737	328946	.	-	.	ID=GCA000012185_00327_gene;locus_tag=GCA000012185_00327;gene=arfA
contig_1	Pyrodigal	CDS	328737	328946	.	-	0	ID=GCA000012185_00327;Name=Alternative ribosome-rescue factor A;locus_tag=GCA000012185_00327;product=Alternative ribosome-rescue factor A;Dbxref=GO:0006417,GO:0019843,GO:0072344;gene=arfA;Parent=GCA000012185_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09890,SO:0001217,UniParc:UPI000013B1F7,UniRef:UniRef100_P44588,UniRef:UniRef50_P44588,UniRef:UniRef90_P44588
contig_1	Pyrodigal	gene	329014	329364	.	-	.	ID=GCA000012185_00328_gene;locus_tag=GCA000012185_00328;gene=arsC
contig_1	Pyrodigal	CDS	329014	329364	.	-	0	ID=GCA000012185_00328;Name=arsenate reductase (glutaredoxin);locus_tag=GCA000012185_00328;product=arsenate reductase (glutaredoxin);Dbxref=GO:0008794,GO:0046685;gene=arsC;Parent=GCA000012185_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,KEGG:K00537,RefSeq:WP_005648814.1,SO:0001217,UniParc:UPI00003CDA11,UniRef:UniRef100_A0A0H3PMY6,UniRef:UniRef50_P44589,UniRef:UniRef90_P44589;ec_number=1.20.4.1
contig_1	Pyrodigal	gene	329443	330492	.	+	.	ID=GCA000012185_00329_gene;locus_tag=GCA000012185_00329;gene=perM
contig_1	Pyrodigal	CDS	329443	330492	.	+	0	ID=GCA000012185_00329;Name=Putative permease PerM-like protein;locus_tag=GCA000012185_00329;product=Putative permease PerM-like protein;Dbxref=GO:0005886,GO:0055085;gene=perM;Parent=GCA000012185_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_005656162.1,SO:0001217,UniParc:UPI000053E070,UniRef:UniRef100_A0A0H3PF32,UniRef:UniRef50_P43969,UniRef:UniRef90_P43969
contig_1	Pyrodigal	gene	330606	331580	.	-	.	ID=GCA000012185_00330_gene;locus_tag=GCA000012185_00330;gene=secF
contig_1	Pyrodigal	CDS	330606	331580	.	-	0	ID=GCA000012185_00330;Name=Protein translocase subunit SecF;locus_tag=GCA000012185_00330;product=Protein translocase subunit SecF;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0015450,GO:0043952,GO:0065002;gene=secF;Parent=GCA000012185_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0341,COG:U,RefSeq:WP_005656163.1,SO:0001217,UniParc:UPI00014F747E,UniRef:UniRef100_A0A346JUR0,UniRef:UniRef50_P44590,UniRef:UniRef90_P44590
contig_1	Pyrodigal	gene	331591	333441	.	-	.	ID=GCA000012185_00331_gene;locus_tag=GCA000012185_00331;gene=secD
contig_1	Pyrodigal	CDS	331591	333441	.	-	0	ID=GCA000012185_00331;Name=Protein translocase subunit SecD;locus_tag=GCA000012185_00331;product=Protein translocase subunit SecD;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0015450,GO:0043952,GO:0065002;gene=secD;Parent=GCA000012185_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,RefSeq:WP_005653411.1,SO:0001217,UniParc:UPI000045E821,UniRef:UniRef100_A0A0H3PI94,UniRef:UniRef50_P0AG90,UniRef:UniRef90_P44591
contig_1	Pyrodigal	gene	333511	333804	.	-	.	ID=GCA000012185_00332_gene;locus_tag=GCA000012185_00332;gene=yajC
contig_1	Pyrodigal	CDS	333511	333804	.	-	0	ID=GCA000012185_00332;Name=preprotein translocase subunit YajC;locus_tag=GCA000012185_00332;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015031,GO:0015450;gene=yajC;Parent=GCA000012185_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_005645638.1,SO:0001217,UniParc:UPI000039A4D8,UniRef:UniRef100_A0A0H3PEF8,UniRef:UniRef50_P44592,UniRef:UniRef90_P44592
contig_1	Pyrodigal	gene	333912	334133	.	-	.	ID=GCA000012185_00333_gene;locus_tag=GCA000012185_00333;gene=tusA
contig_1	Pyrodigal	CDS	333912	334133	.	-	0	ID=GCA000012185_00333;Name=Putative sulfur carrier protein HI_0242;locus_tag=GCA000012185_00333;product=Putative sulfur carrier protein HI_0242;gene=tusA;Parent=GCA000012185_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_005653410.1,SO:0001217,UniParc:UPI00003CDA73,UniRef:UniRef100_A0A0H3PMZ0,UniRef:UniRef50_P44593,UniRef:UniRef90_P44593
contig_1	Pyrodigal	gene	334130	334648	.	-	.	ID=GCA000012185_00334_gene;locus_tag=GCA000012185_00334
contig_1	Pyrodigal	CDS	334130	334648	.	-	0	ID=GCA000012185_00334;Name=putative protein HI_0243;locus_tag=GCA000012185_00334;product=putative protein HI_0243;Parent=GCA000012185_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656166.1,SO:0001217,UniParc:UPI00003CDA74,UniRef:UniRef100_A0A0H3PF37,UniRef:UniRef50_P43971,UniRef:UniRef90_P43971
contig_1	Pyrodigal	gene	334713	335861	.	-	.	ID=GCA000012185_00335_gene;locus_tag=GCA000012185_00335;gene=tgt
contig_1	Pyrodigal	CDS	334713	335861	.	-	0	ID=GCA000012185_00335;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA000012185_00335;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA000012185_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_011271940.1,SO:0001217,UniParc:UPI000053E071,UniRef:UniRef100_Q4QNU3,UniRef:UniRef50_P44594,UniRef:UniRef90_P44594;ec_number=2.4.2.29
contig_1	Pyrodigal	gene	336206	337297	.	-	.	ID=GCA000012185_00336_gene;locus_tag=GCA000012185_00336;gene=queA
contig_1	Pyrodigal	CDS	336206	337297	.	-	0	ID=GCA000012185_00336;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA000012185_00336;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0002099,GO:0005737,GO:0006400,GO:0008616,GO:0051075;gene=queA;Parent=GCA000012185_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_011271941.1,SO:0001217,UniParc:UPI000053E072,UniRef:UniRef100_Q4QNU2,UniRef:UniRef50_P44595,UniRef:UniRef90_P44595;ec_number=2.4.99.17
contig_1	Pyrodigal	gene	337421	337867	.	-	.	ID=GCA000012185_00337_gene;locus_tag=GCA000012185_00337
contig_1	Pyrodigal	CDS	337421	337867	.	-	0	ID=GCA000012185_00337;Name=putative protein HI_0246;locus_tag=GCA000012185_00337;product=putative protein HI_0246;Parent=GCA000012185_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005660622.1,SO:0001217,UniParc:UPI00003CD7F2,UniRef:UniRef100_A0A2R3G010,UniRef:UniRef50_P43972,UniRef:UniRef90_P43972
contig_1	Pyrodigal	gene	338010	342188	.	-	.	ID=GCA000012185_00338_gene;locus_tag=GCA000012185_00338;gene=hap
contig_1	Pyrodigal	CDS	338010	342188	.	-	0	ID=GCA000012185_00338;Name=adhesion and penetration autotransporter Hap;locus_tag=GCA000012185_00338;product=adhesion and penetration autotransporter Hap;gene=hap;Parent=GCA000012185_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005689419,BlastRules:WP_109976529,KEGG:K01347,RefSeq:WP_011271942.1,SO:0001217,UniParc:UPI00003CD7F3,UniRef:UniRef100_Q4QNU0,UniRef:UniRef50_P45387,UniRef:UniRef90_Q4QNU0;ec_number=3.4.21.72
contig_1	Pyrodigal	gene	342506	345337	.	-	.	ID=GCA000012185_00339_gene;locus_tag=GCA000012185_00339;gene=uvrA
contig_1	Pyrodigal	CDS	342506	345337	.	-	0	ID=GCA000012185_00339;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000012185_00339;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0006289,GO:0016887;gene=uvrA;Parent=GCA000012185_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_011271943.1,SO:0001217,UniParc:UPI000053E073,UniRef:UniRef100_Q4QNT9,UniRef:UniRef50_P57979,UniRef:UniRef90_Q65V17;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	345490	345996	.	+	.	ID=GCA000012185_00340_gene;locus_tag=GCA000012185_00340;gene=ssb
contig_1	Pyrodigal	CDS	345490	345996	.	+	0	ID=GCA000012185_00340;Name=Single-stranded DNA-binding protein;locus_tag=GCA000012185_00340;product=Single-stranded DNA-binding protein;Dbxref=GO:0003697,GO:0006260,GO:0006281,GO:0006310,GO:0009295;gene=ssb;Parent=GCA000012185_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_011271944.1,SO:0001217,UniParc:UPI000053E074,UniRef:UniRef100_Q4QNT8,UniRef:UniRef50_P44409,UniRef:UniRef90_P44409
contig_1	Pyrodigal	gene	346174	346968	.	-	.	ID=GCA000012185_00341_gene;locus_tag=GCA000012185_00341;gene=tolA
contig_1	Pyrodigal	CDS	346174	346968	.	-	0	ID=GCA000012185_00341;Name=cell envelope integrity protein TolA;locus_tag=GCA000012185_00341;product=cell envelope integrity protein TolA;Dbxref=GO:0005215,GO:0006810,GO:0015031,GO:0015891,GO:0030288,GO:0031992,GO:0055085,GO:0098567,GO:0098797;gene=tolA;Parent=GCA000012185_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0810,COG:M,KEGG:K03832,RefSeq:WP_011271945.1,SO:0001217,UniParc:UPI000053E075,UniRef:UniRef100_Q4QNT7,UniRef:UniRef50_P42872,UniRef:UniRef90_P42872
contig_1	Pyrodigal	gene	346978	347421	.	-	.	ID=GCA000012185_00342_gene;locus_tag=GCA000012185_00342;gene=exbD
contig_1	Pyrodigal	CDS	346978	347421	.	-	0	ID=GCA000012185_00342;Name=TonB system transport protein ExbD;locus_tag=GCA000012185_00342;product=TonB system transport protein ExbD;Dbxref=GO:0005886,GO:0006810,GO:0015031,GO:0015291,GO:0016020,GO:0022857;gene=exbD;Parent=GCA000012185_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_005648853.1,SO:0001217,UniParc:UPI00003CDCDC,UniRef:UniRef100_A0A0D0IKA0,UniRef:UniRef50_P43009,UniRef:UniRef90_P43009
contig_1	Pyrodigal	gene	347425	347877	.	-	.	ID=GCA000012185_00343_gene;locus_tag=GCA000012185_00343;gene=exbB
contig_1	Pyrodigal	CDS	347425	347877	.	-	0	ID=GCA000012185_00343;Name=TonB-system energizer ExbB;locus_tag=GCA000012185_00343;product=TonB-system energizer ExbB;Dbxref=GO:0005886,GO:0015078,GO:0016020,GO:0017038,GO:0055085;gene=exbB;Parent=GCA000012185_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_005648856.1,SO:0001217,UniParc:UPI000012A33B,UniRef:UniRef100_P43008,UniRef:UniRef50_P43008,UniRef:UniRef90_P43008
contig_1	Pyrodigal	gene	348046	348513	.	-	.	ID=GCA000012185_00344_gene;locus_tag=GCA000012185_00344;gene=bcp
contig_1	Pyrodigal	CDS	348046	348513	.	-	0	ID=GCA000012185_00344;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000012185_00344;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0005737,GO:0008379,GO:0016209,GO:0016491,GO:0034599,GO:0045454;gene=bcp;Parent=GCA000012185_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,KEGG:K03564,RefSeq:WP_011271946.1,SO:0001217,UniParc:UPI00003CD8CE,UniRef:UniRef100_Q4QNT4,UniRef:UniRef50_P44411,UniRef:UniRef90_P44411;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	348614	349510	.	+	.	ID=GCA000012185_00345_gene;locus_tag=GCA000012185_00345;gene=dapA
contig_1	Pyrodigal	CDS	348614	349510	.	+	0	ID=GCA000012185_00345;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000012185_00345;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000012185_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_005692198.1,SO:0001217,UniParc:UPI000039A4F3,UniRef:UniRef100_Q4QNT3,UniRef:UniRef50_P43797,UniRef:UniRef90_P43797;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	349621	350250	.	+	.	ID=GCA000012185_00346_gene;locus_tag=GCA000012185_00346;gene=bamC
contig_1	Pyrodigal	CDS	349621	350250	.	+	0	ID=GCA000012185_00346;Name=Outer membrane assembly factor BamC-like protein;locus_tag=GCA000012185_00346;product=Outer membrane assembly factor BamC-like protein;Dbxref=GO:0009279;gene=bamC;Parent=GCA000012185_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3317,COG:M,KEGG:K07287,RefSeq:WP_011271947.1,SO:0001217,UniParc:UPI000053E076,UniRef:UniRef100_Q4QNT2,UniRef:UniRef50_P43973,UniRef:UniRef90_P43973
contig_1	Pyrodigal	gene	350440	350763	.	+	.	ID=GCA000012185_00347_gene;locus_tag=GCA000012185_00347;gene=hpf
contig_1	Pyrodigal	CDS	350440	350763	.	+	0	ID=GCA000012185_00347;Name=ribosome hibernation-promoting factor%2C HPF/YfiA family;locus_tag=GCA000012185_00347;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;Dbxref=GO:0005840,GO:0022627,GO:0043024,GO:0045182,GO:0045900;gene=hpf;Parent=GCA000012185_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_005653397.1,SO:0001217,UniParc:UPI0000111DFA,UniRef:UniRef100_P71346,UniRef:UniRef50_P71346,UniRef:UniRef90_P71346
contig_1	tRNAscan-SE	gene	351204	351293	.	-	.	ID=GCA000012185_00348_gene;locus_tag=GCA000012185_00348;gene=trnS
contig_1	tRNAscan-SE	tRNA	351204	351293	.	-	.	ID=GCA000012185_00348;Name=tRNA-Ser(gga);locus_tag=GCA000012185_00348;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000012185_00348_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	351477	352415	.	-	.	ID=GCA000012185_00349_gene;locus_tag=GCA000012185_00349
contig_1	Pyrodigal	CDS	351477	352415	.	-	0	ID=GCA000012185_00349;Name=Putative glycosyltransferase HI_0258;locus_tag=GCA000012185_00349;product=Putative glycosyltransferase HI_0258;Dbxref=GO:0016757,GO:0046872;Parent=GCA000012185_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271948.1,SO:0001217,UniParc:UPI000053E077,UniRef:UniRef100_Q4QNT0,UniRef:UniRef50_P43974,UniRef:UniRef90_P43974;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	352483	353070	.	-	.	ID=GCA000012185_00350_gene;locus_tag=GCA000012185_00350;gene=orfM
contig_1	Pyrodigal	CDS	352483	353070	.	-	0	ID=GCA000012185_00350;Name=deoxyribonucleotide triphosphate pyrophosphatase;locus_tag=GCA000012185_00350;product=deoxyribonucleotide triphosphate pyrophosphatase;Dbxref=GO:0000166,GO:0005737,GO:0005829,GO:0006281,GO:0009117,GO:0009143,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872,GO:0047429;gene=orfM;Parent=GCA000012185_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,RefSeq:WP_011271949.1,SO:0001217,UniParc:UPI00003CD8D2,UniRef:UniRef100_Q4QNS9,UniRef:UniRef50_Q8ZHF4,UniRef:UniRef90_P44598,VFDB:VFC0258,VFDB:VFG013265;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	353082	353807	.	-	.	ID=GCA000012185_00351_gene;locus_tag=GCA000012185_00351;gene=kdkA
contig_1	Pyrodigal	CDS	353082	353807	.	-	0	ID=GCA000012185_00351;Name=3-deoxy-D-manno-octulosonic-acid kinase;locus_tag=GCA000012185_00351;product=3-deoxy-D-manno-octulosonic-acid kinase;Dbxref=GO:0005524,GO:0005886,GO:0009244,GO:0016301,GO:0016773;gene=kdkA;Parent=GCA000012185_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0478,COG:T,KEGG:K11211,RefSeq:WP_011271950.1,SO:0001217,UniParc:UPI000053E078,UniRef:UniRef100_Q4QNS8,UniRef:UniRef50_O86224,UniRef:UniRef90_O86224,VFDB:VFC0258,VFDB:VFG013271;ec_number=2.7.1.166
contig_1	Pyrodigal	gene	353884	354927	.	+	.	ID=GCA000012185_00352_gene;locus_tag=GCA000012185_00352;gene=opsX
contig_1	Pyrodigal	CDS	353884	354927	.	+	0	ID=GCA000012185_00352;Name=heptosyltransferase I;locus_tag=GCA000012185_00352;product=heptosyltransferase I;Dbxref=GO:0005829,GO:0008713,GO:0008920,GO:0009244;gene=opsX;Parent=GCA000012185_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_011271951.1,SO:0001217,UniParc:UPI00003CD835,UniRef:UniRef100_Q4QNS7,UniRef:UniRef50_Q57336,UniRef:UniRef90_Q57336,VFDB:VFC0258,VFDB:VFG013276;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	355249	357378	.	+	.	ID=GCA000012185_00353_gene;locus_tag=GCA000012185_00353;gene=hxuC
contig_1	Pyrodigal	CDS	355249	357378	.	+	0	ID=GCA000012185_00353;Name=Heme/hemopexin utilization protein C;locus_tag=GCA000012185_00353;product=Heme/hemopexin utilization protein C;Dbxref=GO:0009279,GO:0015232,GO:0015344;gene=hxuC;Parent=GCA000012185_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_011271952.1,SO:0001217,UniParc:UPI000053E079,UniRef:UniRef100_Q4QNS6,UniRef:UniRef50_P45357,UniRef:UniRef90_Q4QNS6
contig_1	Pyrodigal	gene	357454	359151	.	+	.	ID=GCA000012185_00354_gene;locus_tag=GCA000012185_00354;gene=hxuB
contig_1	Pyrodigal	CDS	357454	359151	.	+	0	ID=GCA000012185_00354;Name=heme/hemopexin-binding protein HxuB;locus_tag=GCA000012185_00354;product=heme/hemopexin-binding protein HxuB;Dbxref=GO:0006811,GO:0008320,GO:0009279,GO:0015288,GO:0046819,GO:0046930,GO:0098046;gene=hxuB;Parent=GCA000012185_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694040,COG:COG2831,COG:U,RefSeq:WP_011271953.1,SO:0001217,UniParc:UPI000053E07A,UniRef:UniRef100_Q4QNS5,UniRef:UniRef50_P45356,UniRef:UniRef90_P45356
contig_1	Pyrodigal	gene	359163	361928	.	+	.	ID=GCA000012185_00355_gene;locus_tag=GCA000012185_00355
contig_1	Pyrodigal	CDS	359163	361928	.	+	0	ID=GCA000012185_00355;Name=Heme/hemopexin-binding protein A;locus_tag=GCA000012185_00355;product=Heme/hemopexin-binding protein A;Parent=GCA000012185_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271954.1,SO:0001217,UniParc:UPI000053E07B,UniRef:UniRef100_Q4QNS4,UniRef:UniRef50_P45354,UniRef:UniRef90_Q4QNS4
contig_1	Pyrodigal	gene	362024	362380	.	-	.	ID=GCA000012185_00356_gene;locus_tag=GCA000012185_00356;gene=folB
contig_1	Pyrodigal	CDS	362024	362380	.	-	0	ID=GCA000012185_00356;Name=dihydroneopterin aldolase;locus_tag=GCA000012185_00356;product=dihydroneopterin aldolase;Dbxref=GO:0004150,GO:0005737,GO:0006760,GO:0016853,GO:0046654,GO:0046656;gene=folB;Parent=GCA000012185_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_011271955.1,SO:0001217,UniParc:UPI00003CDAB9,UniRef:UniRef100_A0AAJ8WBL2,UniRef:UniRef50_P46362,UniRef:UniRef90_P46362;ec_number=4.1.2.25
contig_1	Pyrodigal	gene	362463	363062	.	+	.	ID=GCA000012185_00357_gene;locus_tag=GCA000012185_00357;gene=plsY
contig_1	Pyrodigal	CDS	362463	363062	.	+	0	ID=GCA000012185_00357;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA000012185_00357;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772;gene=plsY;Parent=GCA000012185_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_005653382.1,SO:0001217,UniParc:UPI0000139538,UniRef:UniRef100_P44603,UniRef:UniRef50_P44603,UniRef:UniRef90_P44603;ec_number=2.3.1.275
contig_1	Pyrodigal	gene	363104	364807	.	+	.	ID=GCA000012185_00358_gene;locus_tag=GCA000012185_00358;gene=narQ
contig_1	Pyrodigal	CDS	363104	364807	.	+	0	ID=GCA000012185_00358;Name=nitrate/nitrite two-component system sensor histidine kinase NarQ;locus_tag=GCA000012185_00358;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0016020,GO:0046983;gene=narQ;Parent=GCA000012185_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3850,COG:T,KEGG:K07674,RefSeq:WP_011271956.1,SO:0001217,UniParc:UPI000053E07C,UniRef:UniRef100_A0AAJ8WR77,UniRef:UniRef50_P44604,UniRef:UniRef90_P44604;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	364817	365842	.	+	.	ID=GCA000012185_00359_gene;locus_tag=GCA000012185_00359;gene=murB
contig_1	Pyrodigal	CDS	364817	365842	.	+	0	ID=GCA000012185_00359;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000012185_00359;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0050660,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000012185_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_011271957.1,SO:0001217,UniParc:UPI000053E07D,UniRef:UniRef100_Q4QNS0,UniRef:UniRef50_P44605,UniRef:UniRef90_P44605;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	365968	366813	.	+	.	ID=GCA000012185_00360_gene;locus_tag=GCA000012185_00360;gene=rpoH
contig_1	Pyrodigal	CDS	365968	366813	.	+	0	ID=GCA000012185_00360;Name=RNA polymerase sigma factor RpoH;locus_tag=GCA000012185_00360;product=RNA polymerase sigma factor RpoH;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006352,GO:0006355,GO:0009408,GO:0016987;gene=rpoH;Parent=GCA000012185_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03089,RefSeq:WP_005694033.1,SO:0001217,UniParc:UPI0000134564,UniRef:UniRef100_P44404,UniRef:UniRef50_P50511,UniRef:UniRef90_P44404
contig_1	Pyrodigal	gene	366945	367280	.	-	.	ID=GCA000012185_00361_gene;locus_tag=GCA000012185_00361
contig_1	Pyrodigal	CDS	366945	367280	.	-	0	ID=GCA000012185_00361;Name=tRNA-dihydrouridine synthase;locus_tag=GCA000012185_00361;product=tRNA-dihydrouridine synthase;Parent=GCA000012185_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031F5CD2,UniRef:UniRef100_A0AAJ8WBS2,UniRef:UniRef50_A0A4U9HBT0,UniRef:UniRef90_A0AAJ8WBS2
contig_1	Pyrodigal	gene	367280	368146	.	-	.	ID=GCA000012185_00362_gene;locus_tag=GCA000012185_00362;gene=djlA
contig_1	Pyrodigal	CDS	367280	368146	.	-	0	ID=GCA000012185_00362;Name=co-chaperone DjlA;locus_tag=GCA000012185_00362;product=co-chaperone DjlA;Dbxref=GO:0005886,GO:0051087;gene=djlA;Parent=GCA000012185_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_005686695.1,SO:0001217,UniParc:UPI000045E837,UniRef:UniRef100_A0A2R3GFW5,UniRef:UniRef50_Q65RA1,UniRef:UniRef90_P44607
contig_1	Pyrodigal	gene	368225	368866	.	-	.	ID=GCA000012185_00363_gene;locus_tag=GCA000012185_00363;gene=pyrE
contig_1	Pyrodigal	CDS	368225	368866	.	-	0	ID=GCA000012185_00363;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000012185_00363;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0005737,GO:0006207,GO:0006221,GO:0044205,GO:0046132;gene=pyrE;Parent=GCA000012185_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_005644452.1,SO:0001217,UniParc:UPI000053E07E,UniRef:UniRef100_Q4QNR7,UniRef:UniRef50_P50587,UniRef:UniRef90_P43855;ec_number=2.4.2.10
contig_1	Pyrodigal	gene	368890	369606	.	-	.	ID=GCA000012185_00364_gene;locus_tag=GCA000012185_00364;gene=rph
contig_1	Pyrodigal	CDS	368890	369606	.	-	0	ID=GCA000012185_00364;Name=ribonuclease PH;locus_tag=GCA000012185_00364;product=ribonuclease PH;Dbxref=GO:0000049,GO:0000175,GO:0003723,GO:0006364,GO:0008033,GO:0009022,GO:0016075;gene=rph;Parent=GCA000012185_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0689,COG:J,KEGG:K00989,RefSeq:WP_005632808.1,SO:0001217,UniParc:UPI000013445A,UniRef:UniRef100_P44444,UniRef:UniRef50_P50597,UniRef:UniRef90_P44444;ec_number=2.7.7.56
contig_1	tRNAscan-SE	gene	369751	369826	.	-	.	ID=GCA000012185_00365_gene;locus_tag=GCA000012185_00365;gene=trnA
contig_1	tRNAscan-SE	tRNA	369751	369826	.	-	.	ID=GCA000012185_00365;Name=tRNA-Ala(ggc);locus_tag=GCA000012185_00365;product=tRNA-Ala(ggc);gene=trnA;anti_codon=ggc;amino_acid=Ala;Parent=GCA000012185_00365_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Pyrodigal	gene	369907	371349	.	-	.	ID=GCA000012185_00366_gene;locus_tag=GCA000012185_00366;gene=gltX
contig_1	Pyrodigal	CDS	369907	371349	.	-	0	ID=GCA000012185_00366;Name=glutamate--tRNA ligase;locus_tag=GCA000012185_00366;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000012185_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_011271958.1,SO:0001217,UniParc:UPI000053E07F,UniRef:UniRef100_Q4QNR5,UniRef:UniRef50_P04805,UniRef:UniRef90_P43818;ec_number=6.1.1.17
contig_1	tRNAscan-SE	gene	371520	371595	.	+	.	ID=GCA000012185_00367_gene;locus_tag=GCA000012185_00367;gene=trnV
contig_1	tRNAscan-SE	tRNA	371520	371595	.	+	.	ID=GCA000012185_00367;Name=tRNA-Val(tac);locus_tag=GCA000012185_00367;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000012185_00367_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	371639	371714	.	+	.	ID=GCA000012185_00368_gene;locus_tag=GCA000012185_00368;gene=trnV
contig_1	tRNAscan-SE	tRNA	371639	371714	.	+	.	ID=GCA000012185_00368;Name=tRNA-Val(tac);locus_tag=GCA000012185_00368;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000012185_00368_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	371773	371848	.	+	.	ID=GCA000012185_00369_gene;locus_tag=GCA000012185_00369;gene=trnV
contig_1	tRNAscan-SE	tRNA	371773	371848	.	+	.	ID=GCA000012185_00369;Name=tRNA-Val(tac);locus_tag=GCA000012185_00369;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000012185_00369_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	371901	371976	.	+	.	ID=GCA000012185_00370_gene;locus_tag=GCA000012185_00370;gene=trnV
contig_1	tRNAscan-SE	tRNA	371901	371976	.	+	.	ID=GCA000012185_00370;Name=tRNA-Val(tac);locus_tag=GCA000012185_00370;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000012185_00370_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Pyrodigal	gene	372099	373754	.	+	.	ID=GCA000012185_00371_gene;locus_tag=GCA000012185_00371;gene=lpt6
contig_1	Pyrodigal	CDS	372099	373754	.	+	0	ID=GCA000012185_00371;Name=phosphoethanolamine transferase Lpt6;locus_tag=GCA000012185_00371;product=phosphoethanolamine transferase Lpt6;Dbxref=GO:0005886,GO:0009244,GO:0016740;gene=lpt6;Parent=GCA000012185_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694030,COG:COG1368,COG:M,RefSeq:WP_011271959.1,SO:0001217,UniParc:UPI000053E080,UniRef:UniRef100_Q4QNR4,UniRef:UniRef50_P43975,UniRef:UniRef90_P43975
contig_1	Pyrodigal	gene	373772	374581	.	-	.	ID=GCA000012185_00372_gene;locus_tag=GCA000012185_00372;gene=brkB
contig_1	Pyrodigal	CDS	373772	374581	.	-	0	ID=GCA000012185_00372;Name=virulence factor BrkB family protein;locus_tag=GCA000012185_00372;product=virulence factor BrkB family protein;Dbxref=GO:0005886;gene=brkB;Parent=GCA000012185_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_005648916.1,SO:0001217,UniParc:UPI000053E081,UniRef:UniRef100_Q4QNR3,UniRef:UniRef50_P44608,UniRef:UniRef90_P44608
contig_1	Pyrodigal	gene	374578	375063	.	-	.	ID=GCA000012185_00373_gene;locus_tag=GCA000012185_00373;gene=ychJ
contig_1	Pyrodigal	CDS	374578	375063	.	-	0	ID=GCA000012185_00373;Name=YchJ family protein;locus_tag=GCA000012185_00373;product=YchJ family protein;gene=ychJ;Parent=GCA000012185_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3012,COG:S,RefSeq:WP_011271960.1,SO:0001217,UniParc:UPI00003CD7F9,UniRef:UniRef100_Q4QNR2,UniRef:UniRef50_P44609,UniRef:UniRef90_P44609
contig_1	Pyrodigal	gene	375066	375728	.	-	.	ID=GCA000012185_00374_gene;locus_tag=GCA000012185_00374;gene=yiiM
contig_1	Pyrodigal	CDS	375066	375728	.	-	0	ID=GCA000012185_00374;Name=putative protein HI_0278;locus_tag=GCA000012185_00374;product=putative protein HI_0278;Dbxref=GO:0003824,GO:0030151,GO:0030170;gene=yiiM;Parent=GCA000012185_00374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2258,COG:FV,RefSeq:WP_005648919.1,SO:0001217,UniParc:UPI000053E082,UniRef:UniRef100_Q4QNR1,UniRef:UniRef50_P43976,UniRef:UniRef90_P43976
contig_1	Pyrodigal	gene	375964	376722	.	+	.	ID=GCA000012185_00375_gene;locus_tag=GCA000012185_00375;gene=udp
contig_1	Pyrodigal	CDS	375964	376722	.	+	0	ID=GCA000012185_00375;Name=uridine phosphorylase;locus_tag=GCA000012185_00375;product=uridine phosphorylase;Dbxref=GO:0004850,GO:0005829,GO:0009116,GO:0009164,GO:0009166,GO:0016763,GO:0044206,GO:0047847;gene=udp;Parent=GCA000012185_00375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00757,RefSeq:WP_005648921.1,SO:0001217,UniParc:UPI00003CD7FB,UniRef:UniRef100_Q4QNR0,UniRef:UniRef50_P12758,UniRef:UniRef90_P43770;ec_number=2.4.2.3
contig_1	Pyrodigal	gene	376948	378264	.	-	.	ID=GCA000012185_00376_gene;locus_tag=GCA000012185_00376
contig_1	Pyrodigal	CDS	376948	378264	.	-	0	ID=GCA000012185_00376;Name=Putative metabolite transport protein HI_0281;locus_tag=GCA000012185_00376;product=Putative metabolite transport protein HI_0281;Dbxref=GO:0005886,GO:0022857;Parent=GCA000012185_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271961.1,SO:0001217,UniParc:UPI00003CD7FC,UniRef:UniRef100_Q4QNQ9,UniRef:UniRef50_P44610,UniRef:UniRef90_P44610
contig_1	Pyrodigal	gene	378320	379063	.	-	.	ID=GCA000012185_00377_gene;locus_tag=GCA000012185_00377;gene=menH
contig_1	Pyrodigal	CDS	378320	379063	.	-	0	ID=GCA000012185_00377;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA000012185_00377;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA000012185_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_011271962.1,SO:0001217,UniParc:UPI00003CD7FD,UniRef:UniRef100_Q4QNQ8,UniRef:UniRef50_P44611,UniRef:UniRef90_P44611;ec_number=4.2.99.20
contig_1	Pyrodigal	gene	379124	380830	.	-	.	ID=GCA000012185_00378_gene;locus_tag=GCA000012185_00378;gene=menD
contig_1	Pyrodigal	CDS	379124	380830	.	-	0	ID=GCA000012185_00378;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000012185_00378;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000012185_00378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_011271963.1,SO:0001217,UniParc:UPI00003CD7FE,UniRef:UniRef100_Q4QNQ7,UniRef:UniRef50_P44612,UniRef:UniRef90_P44612;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	380846	382117	.	-	.	ID=GCA000012185_00379_gene;locus_tag=GCA000012185_00379;gene=menF
contig_1	Pyrodigal	CDS	380846	382117	.	-	0	ID=GCA000012185_00379;Name=Isochorismate synthase MenF;locus_tag=GCA000012185_00379;product=Isochorismate synthase MenF;Dbxref=GO:0000162,GO:0000287,GO:0008909,GO:0009234;gene=menF;Parent=GCA000012185_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,RefSeq:WP_011271964.1,SO:0001217,UniParc:UPI000045E83F,UniRef:UniRef100_Q4QNQ6,UniRef:UniRef50_P44613,UniRef:UniRef90_P44613;ec_number=5.4.4.2
contig_1	Pyrodigal	gene	382274	383488	.	+	.	ID=GCA000012185_00380_gene;locus_tag=GCA000012185_00380;gene=alaA
contig_1	Pyrodigal	CDS	382274	383488	.	+	0	ID=GCA000012185_00380;Name=Glutamate-pyruvate aminotransferase AlaA;locus_tag=GCA000012185_00380;product=Glutamate-pyruvate aminotransferase AlaA;Dbxref=GO:0004021,GO:0030170,GO:0030632;gene=alaA;Parent=GCA000012185_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_011271965.1,SO:0001217,UniParc:UPI000039A510,UniRef:UniRef100_Q4QNQ5,UniRef:UniRef50_P71348,UniRef:UniRef90_P71348;ec_number=2.6.1.2
contig_1	Pyrodigal	gene	383605	384861	.	+	.	ID=GCA000012185_00381_gene;locus_tag=GCA000012185_00381;gene=mtr
contig_1	Pyrodigal	CDS	383605	384861	.	+	0	ID=GCA000012185_00381;Name=tryptophan permease;locus_tag=GCA000012185_00381;product=tryptophan permease;Dbxref=GO:0003333,GO:0005886,GO:0015173,GO:0015293,GO:0015801;gene=mtr;Parent=GCA000012185_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03835,RefSeq:WP_011271966.1,SO:0001217,UniParc:UPI000053E084,UniRef:UniRef100_Q4QNQ4,UniRef:UniRef50_P44614,UniRef:UniRef90_P44614
contig_1	Pyrodigal	gene	384970	386337	.	-	.	ID=GCA000012185_00382_gene;locus_tag=GCA000012185_00382;gene=sdaA
contig_1	Pyrodigal	CDS	384970	386337	.	-	0	ID=GCA000012185_00382;Name=L-serine ammonia-lyase;locus_tag=GCA000012185_00382;product=L-serine ammonia-lyase;Dbxref=GO:0003941,GO:0006094,GO:0046872,GO:0051539;gene=sdaA;Parent=GCA000012185_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_011271967.1,SO:0001217,UniParc:UPI000053E085,UniRef:UniRef100_A0AAJ8WBP0,UniRef:UniRef50_P71349,UniRef:UniRef90_P71349;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	386372	387610	.	-	.	ID=GCA000012185_00383_gene;locus_tag=GCA000012185_00383;gene=sdaC
contig_1	Pyrodigal	CDS	386372	387610	.	-	0	ID=GCA000012185_00383;Name=Serine transporter SdaC;locus_tag=GCA000012185_00383;product=Serine transporter SdaC;Dbxref=GO:0005886,GO:0015171,GO:0015293;gene=sdaC;Parent=GCA000012185_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03837,RefSeq:WP_011271968.1,SO:0001217,UniParc:UPI000053E086,UniRef:UniRef100_A0AAJ8WBM0,UniRef:UniRef50_P44615,UniRef:UniRef90_P44615
contig_1	Pyrodigal	gene	387833	390001	.	-	.	ID=GCA000012185_00384_gene;locus_tag=GCA000012185_00384;gene=zntA
contig_1	Pyrodigal	CDS	387833	390001	.	-	0	ID=GCA000012185_00384;Name=putative cation-transporting ATPase HI_0290;locus_tag=GCA000012185_00384;product=putative cation-transporting ATPase HI_0290;Dbxref=GO:0003689,GO:0005507,GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0043682,GO:0055070,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=zntA;Parent=GCA000012185_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_011271969.1,SO:0001217,UniParc:UPI000053E087,UniRef:UniRef100_A0AAJ8WBK8,UniRef:UniRef50_P77868,UniRef:UniRef90_P77868;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	389976	390182	.	-	.	ID=GCA000012185_00385_gene;locus_tag=GCA000012185_00385;gene=copZ
contig_1	Pyrodigal	CDS	389976	390182	.	-	0	ID=GCA000012185_00385;Name=putative protein HI_0291;locus_tag=GCA000012185_00385;product=putative protein HI_0291;Dbxref=GO:0046872;gene=copZ;Parent=GCA000012185_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_005631184.1,SO:0001217,UniParc:UPI00001395A4,UniRef:UniRef100_O32622,UniRef:UniRef50_O32622,UniRef:UniRef90_O32622
contig_1	Pyrodigal	gene	390267	390473	.	-	.	ID=GCA000012185_00386_gene;locus_tag=GCA000012185_00386;gene=copZ
contig_1	Pyrodigal	CDS	390267	390473	.	-	0	ID=GCA000012185_00386;Name=putative protein HI_0291;locus_tag=GCA000012185_00386;product=putative protein HI_0291;Dbxref=GO:0046872;gene=copZ;Parent=GCA000012185_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_005631184.1,SO:0001217,UniParc:UPI00001395A4,UniRef:UniRef100_O32622,UniRef:UniRef50_O32622,UniRef:UniRef90_O32622
contig_1	Pyrodigal	gene	390558	390764	.	-	.	ID=GCA000012185_00387_gene;locus_tag=GCA000012185_00387;gene=copZ
contig_1	Pyrodigal	CDS	390558	390764	.	-	0	ID=GCA000012185_00387;Name=putative protein HI_0291;locus_tag=GCA000012185_00387;product=putative protein HI_0291;Dbxref=GO:0046872;gene=copZ;Parent=GCA000012185_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_005631184.1,SO:0001217,UniParc:UPI00001395A4,UniRef:UniRef100_O32622,UniRef:UniRef50_O32622,UniRef:UniRef90_O32622
contig_1	Pyrodigal	gene	390841	391227	.	+	.	ID=GCA000012185_00388_gene;locus_tag=GCA000012185_00388;gene=soxR
contig_1	Pyrodigal	CDS	390841	391227	.	+	0	ID=GCA000012185_00388;Name=putative heavy metal-dependent transcriptional regulator HI_0293;locus_tag=GCA000012185_00388;product=putative heavy metal-dependent transcriptional regulator HI_0293;Dbxref=GO:0003677,GO:0003700,GO:0005507,GO:0005737,GO:0045893;gene=soxR;Parent=GCA000012185_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_005631185.1,SO:0001217,UniParc:UPI00003CDAF6,UniRef:UniRef100_A0AB37AZY7,UniRef:UniRef50_P44617,UniRef:UniRef90_P44617
contig_1	Pyrodigal	gene	391241	391558	.	-	.	ID=GCA000012185_00389_gene;locus_tag=GCA000012185_00389;gene=metJ
contig_1	Pyrodigal	CDS	391241	391558	.	-	0	ID=GCA000012185_00389;Name=met regulon transcriptional regulator MetJ;locus_tag=GCA000012185_00389;product=met regulon transcriptional regulator MetJ;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0009086,GO:0045892;gene=metJ;Parent=GCA000012185_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3060,COG:KE,KEGG:K03764,RefSeq:WP_005634287.1,SO:0001217,UniParc:UPI00003CDAF7,UniRef:UniRef100_Q4QNP9,UniRef:UniRef50_P44618,UniRef:UniRef90_P44618
contig_1	Pyrodigal	gene	391802	393064	.	+	.	ID=GCA000012185_00390_gene;locus_tag=GCA000012185_00390;gene=rho
contig_1	Pyrodigal	CDS	391802	393064	.	+	0	ID=GCA000012185_00390;Name=transcription termination factor Rho;locus_tag=GCA000012185_00390;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0004386,GO:0005524,GO:0005829,GO:0006353,GO:0008186,GO:0016887;gene=rho;Parent=GCA000012185_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,RefSeq:WP_005648966.1,SO:0001217,UniParc:UPI000013389C,UniRef:UniRef100_P44619,UniRef:UniRef50_P0AG30,UniRef:UniRef90_P44619;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	393118	393810	.	-	.	ID=GCA000012185_00391_gene;locus_tag=GCA000012185_00391;gene=hofD
contig_1	Pyrodigal	CDS	393118	393810	.	-	0	ID=GCA000012185_00391;Name=Prepilin leader peptidase/N-methyltransferase;locus_tag=GCA000012185_00391;product=Prepilin leader peptidase/N-methyltransferase;Dbxref=GO:0004190,GO:0005886,GO:0006465,GO:0016740;gene=hofD;Parent=GCA000012185_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1989,COG:NU,RefSeq:WP_011271970.1,SO:0001217,UniParc:UPI00003CDB62,UniRef:UniRef100_Q5D8E0,UniRef:UniRef50_P44620,UniRef:UniRef90_P44620
contig_1	Pyrodigal	gene	393807	395027	.	-	.	ID=GCA000012185_00392_gene;locus_tag=GCA000012185_00392;gene=hofC
contig_1	Pyrodigal	CDS	393807	395027	.	-	0	ID=GCA000012185_00392;Name=Protein transport HofC-like protein;locus_tag=GCA000012185_00392;product=Protein transport HofC-like protein;Dbxref=GO:0005886,GO:0015628;gene=hofC;Parent=GCA000012185_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1459,COG:NU,KEGG:K02505,RefSeq:WP_011271971.1,SO:0001217,UniParc:UPI00004E1BD3,UniRef:UniRef100_Q5D8E1,UniRef:UniRef50_P44621,UniRef:UniRef90_P44621
contig_1	Pyrodigal	gene	395024	396418	.	-	.	ID=GCA000012185_00393_gene;locus_tag=GCA000012185_00393;gene=hofB
contig_1	Pyrodigal	CDS	395024	396418	.	-	0	ID=GCA000012185_00393;Name=Protein transport HofB-like protein;locus_tag=GCA000012185_00393;product=Protein transport HofB-like protein;Dbxref=GO:0005524,GO:0005886,GO:0016887;gene=hofB;Parent=GCA000012185_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2804,COG:NU,RefSeq:WP_011271972.1,SO:0001217,UniParc:UPI000045E844,UniRef:UniRef100_Q5D8E2,UniRef:UniRef50_P44622,UniRef:UniRef90_P44622
contig_1	Pyrodigal	gene	396415	396864	.	-	.	ID=GCA000012185_00394_gene;locus_tag=GCA000012185_00394;gene=ppdD
contig_1	Pyrodigal	CDS	396415	396864	.	-	0	ID=GCA000012185_00394;Name=Prepilin peptidase-dependent D-like protein;locus_tag=GCA000012185_00394;product=Prepilin peptidase-dependent D-like protein;Dbxref=GO:0016020,GO:0043107,GO:0044096;gene=ppdD;Parent=GCA000012185_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4969,COG:NW,RefSeq:WP_011271973.1,SO:0001217,UniParc:UPI000045E845,UniRef:UniRef100_Q5D8E3,UniRef:UniRef50_P44623,UniRef:UniRef90_P44623
contig_1	Pyrodigal	gene	396979	397539	.	+	.	ID=GCA000012185_00395_gene;locus_tag=GCA000012185_00395;gene=ampD
contig_1	Pyrodigal	CDS	396979	397539	.	+	0	ID=GCA000012185_00395;Name=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;locus_tag=GCA000012185_00395;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;Dbxref=GO:0005737,GO:0008745,GO:0009253,GO:0009254,GO:0046872,GO:0071555;gene=ampD;Parent=GCA000012185_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3023,COG:M,RefSeq:WP_011271974.1,SO:0001217,UniParc:UPI000053E088,UniRef:UniRef100_A0A2S9S643,UniRef:UniRef50_P44624,UniRef:UniRef90_P44624;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	398161	399060	.	+	.	ID=GCA000012185_00396_gene;locus_tag=GCA000012185_00396;gene=corC
contig_1	Pyrodigal	CDS	398161	399060	.	+	0	ID=GCA000012185_00396;Name=CNNM family magnesium/cobalt transport protein CorC;locus_tag=GCA000012185_00396;product=CNNM family magnesium/cobalt transport protein CorC;Dbxref=GO:0005886,GO:0050660;gene=corC;Parent=GCA000012185_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4535,COG:P,RefSeq:WP_005656283.1,SO:0001217,UniParc:UPI000039A51C,UniRef:UniRef100_A0A0H3PEK0,UniRef:UniRef50_P0A2L3,UniRef:UniRef90_Q57368
contig_1	Pyrodigal	gene	399083	400612	.	+	.	ID=GCA000012185_00397_gene;locus_tag=GCA000012185_00397;gene=lnt
contig_1	Pyrodigal	CDS	399083	400612	.	+	0	ID=GCA000012185_00397;Name=apolipoprotein N-acyltransferase;locus_tag=GCA000012185_00397;product=apolipoprotein N-acyltransferase;Dbxref=GO:0005886,GO:0016020,GO:0016410,GO:0042158;gene=lnt;Parent=GCA000012185_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03820,RefSeq:WP_079989936.1,SO:0001217,UniParc:UPI00003CD80C,UniRef:UniRef100_Q4QNP1,UniRef:UniRef50_P44626,UniRef:UniRef90_P44626;ec_number=2.3.1.269
contig_1	Pyrodigal	gene	400662	401399	.	+	.	ID=GCA000012185_00398_gene;locus_tag=GCA000012185_00398;gene=rsmE
contig_1	Pyrodigal	CDS	400662	401399	.	+	0	ID=GCA000012185_00398;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000012185_00398;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070042,GO:0070475;gene=rsmE;Parent=GCA000012185_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_011271976.1,SO:0001217,UniParc:UPI00003CD80D,UniRef:UniRef100_Q4QNP0,UniRef:UniRef50_P0AGL7,UniRef:UniRef90_P44627;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	401396	401956	.	+	.	ID=GCA000012185_00399_gene;locus_tag=GCA000012185_00399;gene=algH
contig_1	Pyrodigal	CDS	401396	401956	.	+	0	ID=GCA000012185_00399;Name=YqgE/AlgH family protein;locus_tag=GCA000012185_00399;product=YqgE/AlgH family protein;Dbxref=GO:0005829;gene=algH;Parent=GCA000012185_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1678,COG:K,KEGG:K07735,RefSeq:WP_011271977.1,SO:0001217,UniParc:UPI000053E08A,UniRef:UniRef100_Q4QNN9,UniRef:UniRef50_Q65VZ3,UniRef:UniRef90_P43980
contig_1	Pyrodigal	gene	401956	402375	.	+	.	ID=GCA000012185_00400_gene;locus_tag=GCA000012185_00400;gene=ruvX
contig_1	Pyrodigal	CDS	401956	402375	.	+	0	ID=GCA000012185_00400;Name=Holliday junction resolvase RuvX;locus_tag=GCA000012185_00400;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005737,GO:0006364;gene=ruvX;Parent=GCA000012185_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_005648994.1,SO:0001217,UniParc:UPI000013BF06,UniRef:UniRef100_P43981,UniRef:UniRef50_P43981,UniRef:UniRef90_P43981;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	402425	403003	.	-	.	ID=GCA000012185_00401_gene;locus_tag=GCA000012185_00401;gene=rdgC
contig_1	Pyrodigal	CDS	402425	403003	.	-	0	ID=GCA000012185_00401;Name=Recombination-associated protein RdgC;locus_tag=GCA000012185_00401;product=Recombination-associated protein RdgC;gene=rdgC;Parent=GCA000012185_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03554,SO:0001217,UniParc:UPI00003CD80F,UniRef:UniRef100_A0A2R3G070,UniRef:UniRef50_F9Q6P7,UniRef:UniRef90_A0A2R3G070
contig_1	Pyrodigal	gene	403033	403350	.	-	.	ID=GCA000012185_00402_gene;locus_tag=GCA000012185_00402;gene=rdgC
contig_1	Pyrodigal	CDS	403033	403350	.	-	0	ID=GCA000012185_00402;Name=Recombination-associated protein RdgC;locus_tag=GCA000012185_00402;product=Recombination-associated protein RdgC;gene=rdgC;Parent=GCA000012185_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03554,SO:0001217,UniParc:UPI00003CD810,UniRef:UniRef100_A0AAJ8WRE5,UniRef:UniRef50_A0A2X1RL38,UniRef:UniRef90_A0AAJ8WRE5
contig_1	Pyrodigal	gene	403545	404756	.	+	.	ID=GCA000012185_00403_gene;locus_tag=GCA000012185_00403
contig_1	Pyrodigal	CDS	403545	404756	.	+	0	ID=GCA000012185_00403;Name=Phage integrase family site-specific recombinase;locus_tag=GCA000012185_00403;product=Phage integrase family site-specific recombinase;Parent=GCA000012185_00403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656300.1,SO:0001217,UniParc:UPI000039AE28,UniRef:UniRef100_A0A0H3PN47,UniRef:UniRef50_E6KW65,UniRef:UniRef90_E6KW65
contig_1	Pyrodigal	gene	404793	405227	.	-	.	ID=GCA000012185_00404_gene;locus_tag=GCA000012185_00404
contig_1	Pyrodigal	CDS	404793	405227	.	-	0	ID=GCA000012185_00404;Name=Helix-turn-helix domain protein;locus_tag=GCA000012185_00404;product=Helix-turn-helix domain protein;Parent=GCA000012185_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E08B,UniRef:UniRef100_A0A2V0SFT6,UniRef:UniRef50_Q0I313,UniRef:UniRef90_A0A2V0SFT6
contig_1	Pyrodigal	gene	405340	405762	.	+	.	ID=GCA000012185_00405_gene;locus_tag=GCA000012185_00405
contig_1	Pyrodigal	CDS	405340	405762	.	+	0	ID=GCA000012185_00405;Name=hypothetical protein;locus_tag=GCA000012185_00405;product=hypothetical protein;Parent=GCA000012185_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649003.1,SO:0001217,UniParc:UPI00003CD813,UniRef:UniRef100_A0A0H3PDR5,UniRef:UniRef50_B8F553,UniRef:UniRef90_A0A0H3PDR5
contig_1	Pyrodigal	gene	405771	406544	.	+	.	ID=GCA000012185_00406_gene;locus_tag=GCA000012185_00406
contig_1	Pyrodigal	CDS	405771	406544	.	+	0	ID=GCA000012185_00406;Name=GIY-YIG domain-containing protein;locus_tag=GCA000012185_00406;product=GIY-YIG domain-containing protein;Parent=GCA000012185_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649004.1,SO:0001217,UniParc:UPI000039AE2A,UniRef:UniRef100_A0AAX0YC81,UniRef:UniRef50_B8F552,UniRef:UniRef90_A0A0H3PIE4
contig_1	Pyrodigal	gene	406569	406919	.	+	.	ID=GCA000012185_00407_gene;locus_tag=GCA000012185_00407
contig_1	Pyrodigal	CDS	406569	406919	.	+	0	ID=GCA000012185_00407;Name=DUF1496 domain-containing protein;locus_tag=GCA000012185_00407;product=DUF1496 domain-containing protein;Parent=GCA000012185_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649006.1,SO:0001217,UniParc:UPI000045EA83,UniRef:UniRef100_A0A0H3PEL0,UniRef:UniRef50_A0A377JIA8,UniRef:UniRef90_A0A377JIA8
contig_1	Pyrodigal	gene	407079	407270	.	+	.	ID=GCA000012185_00408_gene;locus_tag=GCA000012185_00408
contig_1	Pyrodigal	CDS	407079	407270	.	+	0	ID=GCA000012185_00408;Name=hypothetical protein;locus_tag=GCA000012185_00408;product=hypothetical protein;Parent=GCA000012185_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656304.1,SO:0001217,UniParc:UPI00003CD6F3,UniRef:UniRef100_A0A0H3PN52,UniRef:UniRef50_E6KW69,UniRef:UniRef90_A0A0H3PN52
contig_1	Pyrodigal	gene	407319	407471	.	+	.	ID=GCA000012185_00409_gene;locus_tag=GCA000012185_00409
contig_1	Pyrodigal	CDS	407319	407471	.	+	0	ID=GCA000012185_00409;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000012185_00409;product=Helix-turn-helix domain-containing protein;Parent=GCA000012185_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649008.1,SO:0001217,UniParc:UPI000039AE2B,UniRef:UniRef100_A0A0H3PF91,UniRef:UniRef50_B8F549,UniRef:UniRef90_A0A0H3PF91
contig_1	Pyrodigal	gene	407638	408456	.	-	.	ID=GCA000012185_00410_gene;locus_tag=GCA000012185_00410
contig_1	Pyrodigal	CDS	407638	408456	.	-	0	ID=GCA000012185_00410;Name=Primase C-terminal 1 domain-containing protein;locus_tag=GCA000012185_00410;product=Primase C-terminal 1 domain-containing protein;Parent=GCA000012185_00410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4QNN1,UniRef:UniRef90_Q4QNN1
contig_1	Pyrodigal	gene	409189	410004	.	+	.	ID=GCA000012185_00411_gene;locus_tag=GCA000012185_00411;gene=proC
contig_1	Pyrodigal	CDS	409189	410004	.	+	0	ID=GCA000012185_00411;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000012185_00411;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0004735,GO:0005737,GO:0006561,GO:0055129;gene=proC;Parent=GCA000012185_00411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0345,COG:E,KEGG:K00286,RefSeq:WP_011271979.1,SO:0001217,UniParc:UPI000053E08C,UniRef:UniRef100_A0A2R3FW33,UniRef:UniRef50_P43869,UniRef:UniRef90_P43869;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	410004	411170	.	+	.	ID=GCA000012185_00412_gene;locus_tag=GCA000012185_00412;gene=hcaT
contig_1	Pyrodigal	CDS	410004	411170	.	+	0	ID=GCA000012185_00412;Name=3-phenylpropionate MFS transporter;locus_tag=GCA000012185_00412;product=3-phenylpropionate MFS transporter;Dbxref=GO:0005886,GO:0015528,GO:0030395;gene=hcaT;Parent=GCA000012185_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05820,RefSeq:WP_011271980.1,SO:0001217,UniParc:UPI000053E08D,UniRef:UniRef100_A0A2R3G164,UniRef:UniRef50_P44629,UniRef:UniRef90_P44629
contig_1	Pyrodigal	gene	411201	412094	.	+	.	ID=GCA000012185_00413_gene;locus_tag=GCA000012185_00413;gene=xerD
contig_1	Pyrodigal	CDS	411201	412094	.	+	0	ID=GCA000012185_00413;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000012185_00413;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000012185_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_011271981.1,SO:0001217,UniParc:UPI000053E08E,UniRef:UniRef100_A0A2R3G175,UniRef:UniRef50_P0A8P8,UniRef:UniRef90_P44630
contig_1	Pyrodigal	gene	412267	412554	.	+	.	ID=GCA000012185_00414_gene;locus_tag=GCA000012185_00414
contig_1	Pyrodigal	CDS	412267	412554	.	+	0	ID=GCA000012185_00414;Name=putative protein HI_0310;locus_tag=GCA000012185_00414;product=putative protein HI_0310;Parent=GCA000012185_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011271982.1,SO:0001217,UniParc:UPI00003CD6FA,UniRef:UniRef100_A0AAJ8WBJ1,UniRef:UniRef50_P43982,UniRef:UniRef90_P43982
contig_1	Pyrodigal	gene	412606	413613	.	-	.	ID=GCA000012185_00415_gene;locus_tag=GCA000012185_00415;gene=ruvB
contig_1	Pyrodigal	CDS	412606	413613	.	-	0	ID=GCA000012185_00415;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000012185_00415;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000012185_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_005649027.1,SO:0001217,UniParc:UPI00003CD6FB,UniRef:UniRef100_Q4QNM6,UniRef:UniRef50_O32055,UniRef:UniRef90_P44631;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	413621	414235	.	-	.	ID=GCA000012185_00416_gene;locus_tag=GCA000012185_00416;gene=ruvA
contig_1	Pyrodigal	CDS	413621	414235	.	-	0	ID=GCA000012185_00416;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000012185_00416;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0009432,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000012185_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_011271983.1,SO:0001217,UniParc:UPI00003CD6FC,UniRef:UniRef100_Q4QNM5,UniRef:UniRef50_P44632,UniRef:UniRef90_P44632;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	414298	414870	.	-	.	ID=GCA000012185_00417_gene;locus_tag=GCA000012185_00417;gene=ruvC
contig_1	Pyrodigal	CDS	414298	414870	.	-	0	ID=GCA000012185_00417;Name=crossover junction endodeoxyribonuclease RuvC;locus_tag=GCA000012185_00417;product=crossover junction endodeoxyribonuclease RuvC;Dbxref=GO:0000287,GO:0003677,GO:0005737,GO:0006281,GO:0006310,GO:0008821,GO:0048476;gene=ruvC;Parent=GCA000012185_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0817,COG:L,KEGG:K01159,RefSeq:WP_011271984.1,SO:0001217,UniParc:UPI00003CD6FD,UniRef:UniRef100_Q4QNM4,UniRef:UniRef50_A6VQA5,UniRef:UniRef90_P44633;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	414917	415657	.	-	.	ID=GCA000012185_00418_gene;locus_tag=GCA000012185_00418;gene=tACO1
contig_1	Pyrodigal	CDS	414917	415657	.	-	0	ID=GCA000012185_00418;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000012185_00418;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA000012185_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_005649034.1,SO:0001217,UniParc:UPI000013ABC1,UniRef:UniRef100_P44634,UniRef:UniRef50_Q51423,UniRef:UniRef90_P44634
contig_1	Pyrodigal	gene	415669	416142	.	-	.	ID=GCA000012185_00419_gene;locus_tag=GCA000012185_00419;gene=nudB
contig_1	Pyrodigal	CDS	415669	416142	.	-	0	ID=GCA000012185_00419;Name=dihydroneopterin triphosphate diphosphatase;locus_tag=GCA000012185_00419;product=dihydroneopterin triphosphate diphosphatase;Dbxref=GO:0008828,GO:0019177,GO:0046656;gene=nudB;Parent=GCA000012185_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_011271985.1,SO:0001217,UniParc:UPI000053E08F,UniRef:UniRef100_A0A2S9RGZ7,UniRef:UniRef50_P44635,UniRef:UniRef90_A0A2S9RGZ7;ec_number=3.6.1.67
contig_1	Pyrodigal	gene	416164	417930	.	-	.	ID=GCA000012185_00420_gene;locus_tag=GCA000012185_00420;gene=aspS
contig_1	Pyrodigal	CDS	416164	417930	.	-	0	ID=GCA000012185_00420;Name=aspartate--tRNA ligase;locus_tag=GCA000012185_00420;product=aspartate--tRNA ligase;Dbxref=GO:0003676,GO:0004815,GO:0005524,GO:0005737,GO:0006422;gene=aspS;Parent=GCA000012185_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,RefSeq:WP_011271986.1,SO:0001217,UniParc:UPI00003CD700,UniRef:UniRef100_Q4QNM1,UniRef:UniRef50_Q15RN2,UniRef:UniRef90_P43817;ec_number=6.1.1.12
contig_1	Pyrodigal	gene	418149	418667	.	+	.	ID=GCA000012185_00421_gene;locus_tag=GCA000012185_00421;gene=ypbQ
contig_1	Pyrodigal	CDS	418149	418667	.	+	0	ID=GCA000012185_00421;Name=putative protein HI_0318;locus_tag=GCA000012185_00421;product=putative protein HI_0318;Dbxref=GO:0004671,GO:0005886;gene=ypbQ;Parent=GCA000012185_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1755,COG:S,RefSeq:WP_005649040.1,SO:0001217,UniParc:UPI0000139603,UniRef:UniRef100_P43984,UniRef:UniRef50_P43984,UniRef:UniRef90_P43984
contig_1	Pyrodigal	gene	418720	419445	.	+	.	ID=GCA000012185_00422_gene;locus_tag=GCA000012185_00422;gene=cmoA
contig_1	Pyrodigal	CDS	418720	419445	.	+	0	ID=GCA000012185_00422;Name=carboxy-S-adenosyl-L-methionine synthase CmoA;locus_tag=GCA000012185_00422;product=carboxy-S-adenosyl-L-methionine synthase CmoA;Dbxref=GO:0002098,GO:0016743,GO:1904047;gene=cmoA;Parent=GCA000012185_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4106,RefSeq:WP_011271987.1,SO:0001217,UniParc:UPI00003CD701,UniRef:UniRef100_Q4QNL9,UniRef:UniRef50_P43985,UniRef:UniRef90_P43985;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	419538	419774	.	+	.	ID=GCA000012185_00423_gene;locus_tag=GCA000012185_00423;gene=vapB1
contig_1	Pyrodigal	CDS	419538	419774	.	+	0	ID=GCA000012185_00423;Name=Antitoxin VapB1;locus_tag=GCA000012185_00423;product=Antitoxin VapB1;Dbxref=GO:0003677;gene=vapB1;Parent=GCA000012185_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4456,COG:S,KEGG:K18829,RefSeq:WP_005649046.1,SO:0001217,UniParc:UPI0000139612,UniRef:UniRef100_Q57534,UniRef:UniRef50_Q57534,UniRef:UniRef90_Q57534
contig_1	Pyrodigal	gene	419771	420175	.	+	.	ID=GCA000012185_00424_gene;locus_tag=GCA000012185_00424;gene=vapC1
contig_1	Pyrodigal	CDS	419771	420175	.	+	0	ID=GCA000012185_00424;Name=Ribonuclease VapC1;locus_tag=GCA000012185_00424;product=Ribonuclease VapC1;Dbxref=GO:0000287,GO:0004540;gene=vapC1;Parent=GCA000012185_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1487,COG:V,RefSeq:WP_005649049.1,SO:0001217,UniParc:UPI000039AE36,UniRef:UniRef100_E4QWH2,UniRef:UniRef50_E4QWH2,UniRef:UniRef90_E4QWH2;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	420242	420649	.	+	.	ID=GCA000012185_00425_gene;locus_tag=GCA000012185_00425;gene=gloA
contig_1	Pyrodigal	CDS	420242	420649	.	+	0	ID=GCA000012185_00425;Name=lactoylglutathione lyase;locus_tag=GCA000012185_00425;product=lactoylglutathione lyase;Dbxref=GO:0004462,GO:0005737,GO:0019243,GO:0046872,GO:0051596;gene=gloA;Parent=GCA000012185_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_005688980.1,SO:0001217,UniParc:UPI000012E60E,UniRef:UniRef100_P44638,UniRef:UniRef50_P44638,UniRef:UniRef90_P44638;ec_number=4.4.1.5
contig_1	Pyrodigal	gene	420723	421412	.	+	.	ID=GCA000012185_00426_gene;locus_tag=GCA000012185_00426;gene=rnt
contig_1	Pyrodigal	CDS	420723	421412	.	+	0	ID=GCA000012185_00426;Name=ribonuclease T;locus_tag=GCA000012185_00426;product=ribonuclease T;Dbxref=GO:0000287,GO:0003676,GO:0005829,GO:0006364,GO:0008033,GO:0008408,GO:0016896,GO:0042780,GO:0045004;gene=rnt;Parent=GCA000012185_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,KEGG:K03683,RefSeq:WP_011271988.1,SO:0001217,UniParc:UPI00003CD702,UniRef:UniRef100_Q4QNL5,UniRef:UniRef50_P30014,UniRef:UniRef90_P44639;ec_number=3.1.13.-
contig_1	Infernal	regulatory_region	421507	421628	3.1e-13	+	.	ID=JPLKGDNPJF_102;Name=Histidine operon leader;product=Histidine operon leader;Dbxref=RFAM:RF00514;inference=profile:Rfam:RF00514;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	421726	423078	.	+	.	ID=GCA000012185_00427_gene;locus_tag=GCA000012185_00427;gene=yuiF
contig_1	Pyrodigal	CDS	421726	423078	.	+	0	ID=GCA000012185_00427;Name=putative membrane protein HI_0325;locus_tag=GCA000012185_00427;product=putative membrane protein HI_0325;Dbxref=GO:0005886;gene=yuiF;Parent=GCA000012185_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2056,COG:E,KEGG:K07084,RefSeq:WP_005694344.1,SO:0001217,UniParc:UPI000013961E,UniRef:UniRef100_P44640,UniRef:UniRef50_P44640,UniRef:UniRef90_P44640
contig_1	Pyrodigal	gene	423111	423698	.	+	.	ID=GCA000012185_00428_gene;locus_tag=GCA000012185_00428;gene=priC
contig_1	Pyrodigal	CDS	423111	423698	.	+	0	ID=GCA000012185_00428;Name=putative primosomal replication protein N;locus_tag=GCA000012185_00428;product=putative primosomal replication protein N;gene=priC;Parent=GCA000012185_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3923,COG:L,RefSeq:WP_005654063.1,SO:0001217,UniParc:UPI000053E090,UniRef:UniRef100_A0A2R3FVV7,UniRef:UniRef50_H1LPE1,UniRef:UniRef90_A5UGD9
contig_1	tRNAscan-SE	gene	423749	423838	.	-	.	ID=GCA000012185_00429_gene;locus_tag=GCA000012185_00429;gene=trnS
contig_1	tRNAscan-SE	tRNA	423749	423838	.	-	.	ID=GCA000012185_00429;Name=tRNA-Ser(tga);locus_tag=GCA000012185_00429;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000012185_00429_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	424049	424615	.	-	.	ID=GCA000012185_00430_gene;locus_tag=GCA000012185_00430;gene=efp
contig_1	Pyrodigal	CDS	424049	424615	.	-	0	ID=GCA000012185_00430;Name=elongation factor P;locus_tag=GCA000012185_00430;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA000012185_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_005544066.1,SO:0001217,UniParc:UPI000016859A,UniRef:UniRef100_P43771,UniRef:UniRef50_P0A6N4,UniRef:UniRef90_P43771
contig_1	Pyrodigal	gene	424653	425669	.	+	.	ID=GCA000012185_00431_gene;locus_tag=GCA000012185_00431;gene=epmB
contig_1	Pyrodigal	CDS	424653	425669	.	+	0	ID=GCA000012185_00431;Name=EF-P beta-lysylation protein EpmB;locus_tag=GCA000012185_00431;product=EF-P beta-lysylation protein EpmB;Dbxref=GO:0016853,GO:0046872,GO:0051539;gene=epmB;Parent=GCA000012185_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1509,COG:E,KEGG:K19810,RefSeq:WP_005691796.1,SO:0001217,UniParc:UPI000013B557,UniRef:UniRef100_P44641,UniRef:UniRef50_P39280,UniRef:UniRef90_P44641;ec_number=5.4.3.-
contig_1	Pyrodigal	gene	425768	427063	.	+	.	ID=GCA000012185_00432_gene;locus_tag=GCA000012185_00432;gene=oapA
contig_1	Pyrodigal	CDS	425768	427063	.	+	0	ID=GCA000012185_00432;Name=opacity associated protein (oapA);locus_tag=GCA000012185_00432;product=opacity associated protein (oapA);Dbxref=GO:0004222,GO:0005576,GO:0009279,GO:0032153,GO:0042834;gene=oapA;Parent=GCA000012185_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3061,COG:D,KEGG:K07268,RefSeq:WP_011271989.1,SO:0001217,UniParc:UPI000053E091,UniRef:UniRef100_A0A2S9S630,UniRef:UniRef50_P44415,UniRef:UniRef90_P44415,VFDB:VFC0001,VFDB:VFG000334
contig_1	Pyrodigal	gene	427122	427526	.	+	.	ID=GCA000012185_00433_gene;locus_tag=GCA000012185_00433;gene=oapB
contig_1	Pyrodigal	CDS	427122	427526	.	+	0	ID=GCA000012185_00433;Name=Opacity-associated protein OapB;locus_tag=GCA000012185_00433;product=Opacity-associated protein OapB;gene=oapB;Parent=GCA000012185_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688971.1,SO:0001217,UniParc:UPI00003CD705,UniRef:UniRef100_A0A2R3FVN3,UniRef:UniRef50_P44416,UniRef:UniRef90_P44416
contig_1	Pyrodigal	gene	427529	428239	.	+	.	ID=GCA000012185_00434_gene;locus_tag=GCA000012185_00434;gene=recO
contig_1	Pyrodigal	CDS	427529	428239	.	+	0	ID=GCA000012185_00434;Name=DNA repair protein RecO;locus_tag=GCA000012185_00434;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000012185_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,RefSeq:WP_011271990.1,SO:0001217,UniParc:UPI00003CD706,UniRef:UniRef100_Q4QNK8,UniRef:UniRef50_P0A7H3,UniRef:UniRef90_P44642
contig_1	Pyrodigal	gene	428239	429555	.	+	.	ID=GCA000012185_00435_gene;locus_tag=GCA000012185_00435;gene=rlmD
contig_1	Pyrodigal	CDS	428239	429555	.	+	0	ID=GCA000012185_00435;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA000012185_00435;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0003723,GO:0005506,GO:0008649,GO:0051539,GO:0070041;gene=rlmD;Parent=GCA000012185_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03215,RefSeq:WP_011271991.1,SO:0001217,UniParc:UPI00003CD707,UniRef:UniRef100_Q4QNK7,UniRef:UniRef50_Q9CJX3,UniRef:UniRef90_Q4QNK7;ec_number=2.1.1.190
contig_1	Pyrodigal	gene	429633	431864	.	+	.	ID=GCA000012185_00436_gene;locus_tag=GCA000012185_00436;gene=relA
contig_1	Pyrodigal	CDS	429633	431864	.	+	0	ID=GCA000012185_00436;Name=GTP diphosphokinase;locus_tag=GCA000012185_00436;product=GTP diphosphokinase;Dbxref=GO:0005524,GO:0005525,GO:0008728,GO:0008893,GO:0015969,GO:0015970,GO:0016301,GO:0042594;gene=relA;Parent=GCA000012185_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,RefSeq:WP_011271992.1,SO:0001217,UniParc:UPI000053E092,UniRef:UniRef100_Q4QNK6,UniRef:UniRef50_P44644,UniRef:UniRef90_P44644;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	431879	432235	.	+	.	ID=GCA000012185_00437_gene;locus_tag=GCA000012185_00437;gene=dgkA
contig_1	Pyrodigal	CDS	431879	432235	.	+	0	ID=GCA000012185_00437;Name=Diacylglycerol kinase;locus_tag=GCA000012185_00437;product=Diacylglycerol kinase;Dbxref=GO:0004143,GO:0005524,GO:0005886,GO:0006654,GO:0046872;gene=dgkA;Parent=GCA000012185_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0818,COG:I,RefSeq:WP_005632174.1,SO:0001217,UniParc:UPI000045EA8C,UniRef:UniRef100_A0A0H3PIH0,UniRef:UniRef50_P44424,UniRef:UniRef90_P44424;ec_number=2.7.1.107
contig_1	Pyrodigal	gene	432318	432911	.	+	.	ID=GCA000012185_00438_gene;locus_tag=GCA000012185_00438;gene=mog
contig_1	Pyrodigal	CDS	432318	432911	.	+	0	ID=GCA000012185_00438;Name=molybdopterin adenylyltransferase;locus_tag=GCA000012185_00438;product=molybdopterin adenylyltransferase;Dbxref=GO:0005524,GO:0006777,GO:0061598;gene=mog;Parent=GCA000012185_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_005635167.1,SO:0001217,UniParc:UPI000039AE43,UniRef:UniRef100_A0A158SZM9,UniRef:UniRef50_P0AF03,UniRef:UniRef90_P44645;ec_number=2.7.7.75
contig_1	Pyrodigal	gene	432913	433251	.	+	.	ID=GCA000012185_00439_gene;locus_tag=GCA000012185_00439;gene=glnB
contig_1	Pyrodigal	CDS	432913	433251	.	+	0	ID=GCA000012185_00439;Name=nitrogen regulatory protein P-II;locus_tag=GCA000012185_00439;product=nitrogen regulatory protein P-II;Dbxref=GO:0005524,GO:0005829,GO:0006808,GO:0030234;gene=glnB;Parent=GCA000012185_00439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0347,COG:TE,RefSeq:WP_005649085.1,SO:0001217,UniParc:UPI000039AE44,UniRef:UniRef100_A0A0C5F1A5,UniRef:UniRef50_Q53044,UniRef:UniRef90_P43795
contig_1	Pyrodigal	gene	433251	434297	.	+	.	ID=GCA000012185_00440_gene;locus_tag=GCA000012185_00440;gene=perM
contig_1	Pyrodigal	CDS	433251	434297	.	+	0	ID=GCA000012185_00440;Name=Putative transport protein HI_0338;locus_tag=GCA000012185_00440;product=Putative transport protein HI_0338;Dbxref=GO:0005886,GO:0055085;gene=perM;Parent=GCA000012185_00440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,KEGG:K11744,RefSeq:WP_005649088.1,SO:0001217,UniParc:UPI00003CD9F5,UniRef:UniRef100_A0A2R3FW70,UniRef:UniRef50_P44646,UniRef:UniRef90_P44646
contig_1	Pyrodigal	gene	434339	436531	.	-	.	ID=GCA000012185_00441_gene;locus_tag=GCA000012185_00441;gene=priA
contig_1	Pyrodigal	CDS	434339	436531	.	-	0	ID=GCA000012185_00441;Name=primosomal protein N';locus_tag=GCA000012185_00441;product=primosomal protein N';Dbxref=GO:0003677,GO:0005524,GO:0006268,GO:0006269,GO:0006270,GO:0006302,GO:0006310,GO:0008270,GO:0016787,GO:0043138,GO:1990077;gene=priA;Parent=GCA000012185_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1198,COG:L,KEGG:K04066,RefSeq:WP_011271993.1,SO:0001217,UniParc:UPI000053E093,UniRef:UniRef100_Q4QNK1,UniRef:UniRef50_P44647,UniRef:UniRef90_P44647;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	436616	437356	.	+	.	ID=GCA000012185_00442_gene;locus_tag=GCA000012185_00442;gene=trmB
contig_1	Pyrodigal	CDS	436616	437356	.	+	0	ID=GCA000012185_00442;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000012185_00442;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176,GO:0030488,GO:0036265,GO:0043527;gene=trmB;Parent=GCA000012185_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0220,COG:J,RefSeq:WP_011271994.1,SO:0001217,UniParc:UPI000053E094,UniRef:UniRef100_Q4QNK0,UniRef:UniRef50_P44648,UniRef:UniRef90_P44648;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	437441	437785	.	+	.	ID=GCA000012185_00443_gene;locus_tag=GCA000012185_00443;gene=yggL
contig_1	Pyrodigal	CDS	437441	437785	.	+	0	ID=GCA000012185_00443;Name=putative protein HI_0341;locus_tag=GCA000012185_00443;product=putative protein HI_0341;Dbxref=GO:0005829;gene=yggL;Parent=GCA000012185_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3171,COG:S,KEGG:K09923,RefSeq:WP_005632159.1,SO:0001217,UniParc:UPI000039AE48,UniRef:UniRef100_A0A502LB16,UniRef:UniRef50_P44649,UniRef:UniRef90_P44649
contig_1	Pyrodigal	gene	437991	438521	.	+	.	ID=GCA000012185_00444_gene;locus_tag=GCA000012185_00444;gene=napF
contig_1	Pyrodigal	CDS	437991	438521	.	+	0	ID=GCA000012185_00444;Name=ferredoxin-type protein NapF;locus_tag=GCA000012185_00444;product=ferredoxin-type protein NapF;Dbxref=GO:0005737,GO:0046872,GO:0051539;gene=napF;Parent=GCA000012185_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,RefSeq:WP_005666641.1,SO:0001217,UniParc:UPI00003CD740,UniRef:UniRef100_A0A2S9S622,UniRef:UniRef50_P44650,UniRef:UniRef90_P44650
contig_1	Pyrodigal	gene	438514	438795	.	+	.	ID=GCA000012185_00445_gene;locus_tag=GCA000012185_00445;gene=napD
contig_1	Pyrodigal	CDS	438514	438795	.	+	0	ID=GCA000012185_00445;Name=Chaperone NapD;locus_tag=GCA000012185_00445;product=Chaperone NapD;Dbxref=GO:0005048,GO:0005737,GO:0051224;gene=napD;Parent=GCA000012185_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3062,COG:O,KEGG:K02570,RefSeq:WP_005656333.1,SO:0001217,UniParc:UPI00003CD741,UniRef:UniRef100_A0A0H3PFB9,UniRef:UniRef50_P44651,UniRef:UniRef90_P44651
contig_1	Pyrodigal	gene	438832	441315	.	+	.	ID=GCA000012185_00446_gene;locus_tag=GCA000012185_00446;gene=napA
contig_1	Pyrodigal	CDS	438832	441315	.	+	0	ID=GCA000012185_00446;Name=nitrate reductase catalytic subunit NapA;locus_tag=GCA000012185_00446;product=nitrate reductase catalytic subunit NapA;Dbxref=GO:0005506,GO:0006777,GO:0008940,GO:0009055,GO:0009325,GO:0016020,GO:0030151,GO:0042128,GO:0042597,GO:0043546,GO:0045333,GO:0050140,GO:0051539;gene=napA;Parent=GCA000012185_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,KEGG:K02567,RefSeq:WP_041174733.1,SO:0001217,UniParc:UPI00003CD742,UniRef:UniRef100_Q4QNJ6,UniRef:UniRef50_P33937,UniRef:UniRef90_Q4QNJ6;ec_number=1.9.6.1
contig_1	Pyrodigal	gene	441375	442208	.	+	.	ID=GCA000012185_00447_gene;locus_tag=GCA000012185_00447;gene=napG
contig_1	Pyrodigal	CDS	441375	442208	.	+	0	ID=GCA000012185_00447;Name=ferredoxin-type protein NapG;locus_tag=GCA000012185_00447;product=ferredoxin-type protein NapG;Dbxref=GO:0005886,GO:0042597,GO:0046872,GO:0051539;gene=napG;Parent=GCA000012185_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,SO:0001217,UniParc:UPI00014F8262,UniRef:UniRef100_A4NVY6,UniRef:UniRef50_P44652,UniRef:UniRef90_P44652;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	442208	443071	.	+	.	ID=GCA000012185_00448_gene;locus_tag=GCA000012185_00448;gene=napH
contig_1	Pyrodigal	CDS	442208	443071	.	+	0	ID=GCA000012185_00448;Name=quinol dehydrogenase ferredoxin subunit NapH;locus_tag=GCA000012185_00448;product=quinol dehydrogenase ferredoxin subunit NapH;Dbxref=GO:0005886,GO:0046872,GO:0051539;gene=napH;Parent=GCA000012185_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0348,RefSeq:WP_011271996.1,SO:0001217,UniParc:UPI000039A545,UniRef:UniRef100_A0A2R3GBN4,UniRef:UniRef50_P33934,UniRef:UniRef90_P44653;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	443077	443520	.	+	.	ID=GCA000012185_00449_gene;locus_tag=GCA000012185_00449;gene=napB
contig_1	Pyrodigal	CDS	443077	443520	.	+	0	ID=GCA000012185_00449;Name=Periplasmic nitrate reductase%2C electron transfer subunit;locus_tag=GCA000012185_00449;product=Periplasmic nitrate reductase%2C electron transfer subunit;Dbxref=GO:0009061,GO:0042597,GO:0046872,GO:0060090;gene=napB;Parent=GCA000012185_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3043,COG:CP,RefSeq:WP_005649106.1,SO:0001217,UniParc:UPI00003CD743,UniRef:UniRef100_P44654,UniRef:UniRef50_P44654,UniRef:UniRef90_P44654
contig_1	Pyrodigal	gene	443535	444137	.	+	.	ID=GCA000012185_00450_gene;locus_tag=GCA000012185_00450
contig_1	Pyrodigal	CDS	443535	444137	.	+	0	ID=GCA000012185_00450;Name=Cytochrome c-type protein;locus_tag=GCA000012185_00450;product=Cytochrome c-type protein;Parent=GCA000012185_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649107.1,SO:0001217,UniParc:UPI000039A546,UniRef:UniRef100_A0A0D6G396,UniRef:UniRef50_P44655,UniRef:UniRef90_A0A0D6G396
contig_1	Pyrodigal	gene	444297	444941	.	-	.	ID=GCA000012185_00451_gene;locus_tag=GCA000012185_00451;gene=adk
contig_1	Pyrodigal	CDS	444297	444941	.	-	0	ID=GCA000012185_00451;Name=adenylate kinase;locus_tag=GCA000012185_00451;product=adenylate kinase;Dbxref=GO:0004017,GO:0004550,GO:0005524,GO:0005737,GO:0005829,GO:0006139,GO:0009123,GO:0009132,GO:0044209;gene=adk;Parent=GCA000012185_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0563,COG:F,RefSeq:WP_005649108.1,SO:0001217,UniParc:UPI000012DBC0,UniRef:UniRef100_P24323,UniRef:UniRef50_P24323,UniRef:UniRef90_P24323;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	445026	446303	.	-	.	ID=GCA000012185_00452_gene;locus_tag=GCA000012185_00452
contig_1	Pyrodigal	CDS	445026	446303	.	-	0	ID=GCA000012185_00452;Name=putative protein HI_0350;locus_tag=GCA000012185_00452;product=putative protein HI_0350;Dbxref=GO:0005886,GO:0022857;Parent=GCA000012185_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08218,RefSeq:WP_011271997.1,SO:0001217,UniParc:UPI000053E097,UniRef:UniRef100_A0A2S9RCV9,UniRef:UniRef50_P24326,UniRef:UniRef90_P24326
contig_1	Pyrodigal	gene	446445	447461	.	-	.	ID=GCA000012185_00453_gene;locus_tag=GCA000012185_00453;gene=galE
contig_1	Pyrodigal	CDS	446445	447461	.	-	0	ID=GCA000012185_00453;Name=UDP-glucose 4-epimerase;locus_tag=GCA000012185_00453;product=UDP-glucose 4-epimerase;Dbxref=GO:0003978,GO:0005829,GO:0005996,GO:0006012;gene=galE;Parent=GCA000012185_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1087,COG:M,RefSeq:WP_005688951.1,SO:0001217,UniParc:UPI000053E098,UniRef:UniRef100_A0A0Y7IED9,UniRef:UniRef50_P24325,UniRef:UniRef90_P24325,VFDB:VFC0258,VFDB:VFG013286;ec_number=5.1.3.2
contig_1	Pyrodigal	gene	447634	448596	.	-	.	ID=GCA000012185_00454_gene;locus_tag=GCA000012185_00454
contig_1	Pyrodigal	CDS	447634	448596	.	-	0	ID=GCA000012185_00454;Name=putative protein HI_0352;locus_tag=GCA000012185_00454;product=putative protein HI_0352;Parent=GCA000012185_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12247,RefSeq:WP_011271998.1,SO:0001217,UniParc:UPI00003CD747,UniRef:UniRef100_Q4QNI8,UniRef:UniRef50_P24324,UniRef:UniRef90_P24324;ec_number=2.4.3.-
contig_1	Infernal	regulatory_region	448833	448921	5.4e-10	+	.	ID=JPLKGDNPJF_106;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	448995	449717	.	+	.	ID=GCA000012185_00455_gene;locus_tag=GCA000012185_00455;gene=tauB
contig_1	Pyrodigal	CDS	448995	449717	.	+	0	ID=GCA000012185_00455;Name=putative ABC transporter ATP-binding protein HI_0354;locus_tag=GCA000012185_00455;product=putative ABC transporter ATP-binding protein HI_0354;Dbxref=GO:0005524,GO:0016887;gene=tauB;Parent=GCA000012185_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1116,COG:P,RefSeq:WP_005688947.1,SO:0001217,UniParc:UPI00003CD748,UniRef:UniRef100_A0A2R3G141,UniRef:UniRef50_P44656,UniRef:UniRef90_P44656
contig_1	Pyrodigal	gene	449714	450451	.	+	.	ID=GCA000012185_00456_gene;locus_tag=GCA000012185_00456;gene=tauC
contig_1	Pyrodigal	CDS	449714	450451	.	+	0	ID=GCA000012185_00456;Name=putative ABC transporter permease protein HI_0355;locus_tag=GCA000012185_00456;product=putative ABC transporter permease protein HI_0355;Dbxref=GO:0005886,GO:0055085;gene=tauC;Parent=GCA000012185_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,RefSeq:WP_005649115.1,SO:0001217,UniParc:UPI000053E099,UniRef:UniRef100_A0A2R3G0J9,UniRef:UniRef50_Q57306,UniRef:UniRef90_Q57306
contig_1	Pyrodigal	gene	450473	451417	.	+	.	ID=GCA000012185_00457_gene;locus_tag=GCA000012185_00457;gene=tauA
contig_1	Pyrodigal	CDS	450473	451417	.	+	0	ID=GCA000012185_00457;Name=Putative thiamine biosynthesis protein HI_0357;locus_tag=GCA000012185_00457;product=Putative thiamine biosynthesis protein HI_0357;Dbxref=GO:0009228;gene=tauA;Parent=GCA000012185_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0715,COG:P,KEGG:K15598,RefSeq:WP_011271999.1,SO:0001217,UniParc:UPI000053E09A,UniRef:UniRef100_Q4QNI5,UniRef:UniRef50_P44658,UniRef:UniRef90_P44658
contig_1	Pyrodigal	gene	451427	452074	.	+	.	ID=GCA000012185_00458_gene;locus_tag=GCA000012185_00458;gene=tenA
contig_1	Pyrodigal	CDS	451427	452074	.	+	0	ID=GCA000012185_00458;Name=thiaminase II;locus_tag=GCA000012185_00458;product=thiaminase II;Dbxref=GO:0005829,GO:0006772,GO:0050334;gene=tenA;Parent=GCA000012185_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0819,COG:H,RefSeq:WP_011272000.1,SO:0001217,UniParc:UPI00003CDB77,UniRef:UniRef100_Q4QNI4,UniRef:UniRef50_P44659,UniRef:UniRef90_P44659;ec_number=3.5.99.2
contig_1	Pyrodigal	gene	452169	452984	.	-	.	ID=GCA000012185_00459_gene;locus_tag=GCA000012185_00459;gene=znuB
contig_1	Pyrodigal	CDS	452169	452984	.	-	0	ID=GCA000012185_00459;Name=putative iron transport system membrane protein HI_0359;locus_tag=GCA000012185_00459;product=putative iron transport system membrane protein HI_0359;Dbxref=GO:0005886,GO:0006826,GO:0010043,GO:0043190,GO:0055085;gene=znuB;Parent=GCA000012185_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,KEGG:K11606,RefSeq:WP_011272001.1,SO:0001217,UniParc:UPI000053E09B,UniRef:UniRef100_A0A2R3GBW0,UniRef:UniRef50_P44660,UniRef:UniRef90_P44660
contig_1	Pyrodigal	gene	452977	453825	.	-	.	ID=GCA000012185_00460_gene;locus_tag=GCA000012185_00460;gene=znuB
contig_1	Pyrodigal	CDS	452977	453825	.	-	0	ID=GCA000012185_00460;Name=putative iron transport system membrane protein HI_0360;locus_tag=GCA000012185_00460;product=putative iron transport system membrane protein HI_0360;Dbxref=GO:0005886,GO:0006826,GO:0010043,GO:0043190,GO:0055085;gene=znuB;Parent=GCA000012185_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,KEGG:K11605,RefSeq:WP_011272002.1,SO:0001217,UniParc:UPI00003CD8FB,UniRef:UniRef100_Q4QNI2,UniRef:UniRef50_Q56954,UniRef:UniRef90_P44661
contig_1	Pyrodigal	gene	453829	454749	.	-	.	ID=GCA000012185_00461_gene;locus_tag=GCA000012185_00461;gene=znuC
contig_1	Pyrodigal	CDS	453829	454749	.	-	0	ID=GCA000012185_00461;Name=putative iron transport system ATP-binding protein HI_0361;locus_tag=GCA000012185_00461;product=putative iron transport system ATP-binding protein HI_0361;Dbxref=GO:0005524,GO:0006826,GO:0016887,GO:0042626,GO:0043190;gene=znuC;Parent=GCA000012185_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_005686805.1,SO:0001217,UniParc:UPI000053E09C,UniRef:UniRef100_Q4QNI1,UniRef:UniRef50_P44662,UniRef:UniRef90_P44662
contig_1	Pyrodigal	gene	454749	455630	.	-	.	ID=GCA000012185_00462_gene;locus_tag=GCA000012185_00462;gene=hpf
contig_1	Pyrodigal	CDS	454749	455630	.	-	0	ID=GCA000012185_00462;Name=Putative metal-binding protein HI_0362;locus_tag=GCA000012185_00462;product=Putative metal-binding protein HI_0362;Dbxref=GO:0007155,GO:0030001,GO:0042597,GO:0046872;gene=hpf;Parent=GCA000012185_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0803,COG:P,KEGG:K11604,RefSeq:WP_005656358.1,SO:0001217,UniParc:UPI00001396B6,UniRef:UniRef100_Q57449,UniRef:UniRef50_Q57449,UniRef:UniRef90_Q57449
contig_1	Pyrodigal	gene	455936	456400	.	+	.	ID=GCA000012185_00463_gene;locus_tag=GCA000012185_00463
contig_1	Pyrodigal	CDS	455936	456400	.	+	0	ID=GCA000012185_00463;Name=Lipoprotein;locus_tag=GCA000012185_00463;product=Lipoprotein;Parent=GCA000012185_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272003.1,SO:0001217,UniParc:UPI00003CD8FE,UniRef:UniRef100_Q4QNH9,UniRef:UniRef50_Q4QNH9,UniRef:UniRef90_Q4QNH9
contig_1	Pyrodigal	gene	456492	457370	.	-	.	ID=GCA000012185_00464_gene;locus_tag=GCA000012185_00464;gene=pbpG
contig_1	Pyrodigal	CDS	456492	457370	.	-	0	ID=GCA000012185_00464;Name=D-alanyl-D-alanine endopeptidase;locus_tag=GCA000012185_00464;product=D-alanyl-D-alanine endopeptidase;Dbxref=GO:0006508,GO:0008360,GO:0008800,GO:0009002,GO:0009252,GO:0030655,GO:0042597,GO:0046677,GO:0071555;gene=pbpG;Parent=GCA000012185_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,RefSeq:WP_011272004.1,SO:0001217,UniParc:UPI000053E09D,UniRef:UniRef100_Q4QNH8,UniRef:UniRef50_P44664,UniRef:UniRef90_P44664;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	457616	458767	.	+	.	ID=GCA000012185_00465_gene;locus_tag=GCA000012185_00465;gene=rlmN
contig_1	Pyrodigal	CDS	457616	458767	.	+	0	ID=GCA000012185_00465;Name=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;locus_tag=GCA000012185_00465;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0019843,GO:0030488,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000012185_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,RefSeq:WP_042599461.1,SO:0001217,UniParc:UPI00003CDC13,UniRef:UniRef100_Q4QNH7,UniRef:UniRef50_P36979,UniRef:UniRef90_A5UAC2;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	458867	459406	.	+	.	ID=GCA000012185_00466_gene;locus_tag=GCA000012185_00466;gene=pilW
contig_1	Pyrodigal	CDS	458867	459406	.	+	0	ID=GCA000012185_00466;Name=type IV pilus biogenesis/stability protein PilW;locus_tag=GCA000012185_00466;product=type IV pilus biogenesis/stability protein PilW;Dbxref=GO:0005515;gene=pilW;Parent=GCA000012185_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3063,COG:NW,RefSeq:WP_011272006.1,SO:0001217,UniParc:UPI000053E09F,UniRef:UniRef100_A0A2S9S5W7,UniRef:UniRef50_P43988,UniRef:UniRef90_P43988
contig_1	Pyrodigal	gene	459478	460389	.	+	.	ID=GCA000012185_00467_gene;locus_tag=GCA000012185_00467;gene=rodZ
contig_1	Pyrodigal	CDS	459478	460389	.	+	0	ID=GCA000012185_00467;Name=putative protein HI_0367;locus_tag=GCA000012185_00467;product=putative protein HI_0367;Dbxref=GO:0003677;gene=rodZ;Parent=GCA000012185_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1426,COG:D,KEGG:K15539,RefSeq:WP_011272007.1,SO:0001217,UniParc:UPI000053E0A0,UniRef:UniRef100_A0A2S9S5X7,UniRef:UniRef50_Q57065,UniRef:UniRef90_Q57065
contig_1	Pyrodigal	gene	460398	461504	.	+	.	ID=GCA000012185_00468_gene;locus_tag=GCA000012185_00468;gene=ispG
contig_1	Pyrodigal	CDS	460398	461504	.	+	0	ID=GCA000012185_00468;Name=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;locus_tag=GCA000012185_00468;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;Dbxref=GO:0005506,GO:0008152,GO:0016114,GO:0019288,GO:0046429,GO:0051539,GO:0141197;gene=ispG;Parent=GCA000012185_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0821,COG:I,KEGG:K03526,RefSeq:WP_011272008.1,SO:0001217,UniParc:UPI000053E0A1,UniRef:UniRef100_Q4QNH4,UniRef:UniRef50_P62620,UniRef:UniRef90_P44667;ec_number=1.17.7.3
contig_1	Pyrodigal	gene	461514	462785	.	+	.	ID=GCA000012185_00469_gene;locus_tag=GCA000012185_00469;gene=hisS
contig_1	Pyrodigal	CDS	461514	462785	.	+	0	ID=GCA000012185_00469;Name=histidine--tRNA ligase;locus_tag=GCA000012185_00469;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427;gene=hisS;Parent=GCA000012185_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_011272009.1,SO:0001217,UniParc:UPI000053E0A2,UniRef:UniRef100_Q4QNH3,UniRef:UniRef50_P43823,UniRef:UniRef90_P43823;ec_number=6.1.1.21
contig_1	Pyrodigal	gene	462803	463417	.	+	.	ID=GCA000012185_00470_gene;locus_tag=GCA000012185_00470;gene=yfgM
contig_1	Pyrodigal	CDS	462803	463417	.	+	0	ID=GCA000012185_00470;Name=Ancillary SecYEG translocon subunit;locus_tag=GCA000012185_00470;product=Ancillary SecYEG translocon subunit;Dbxref=GO:0005886,GO:0044877;gene=yfgM;Parent=GCA000012185_00470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2976,COG:T,RefSeq:WP_011272010.1,SO:0001217,UniParc:UPI00003CDC6A,UniRef:UniRef100_A0A2R3FWC4,UniRef:UniRef50_O52728,UniRef:UniRef90_P43989
contig_1	Pyrodigal	gene	463468	463662	.	-	.	ID=GCA000012185_00471_gene;locus_tag=GCA000012185_00471;gene=iscX
contig_1	Pyrodigal	CDS	463468	463662	.	-	0	ID=GCA000012185_00471;Name=Protein IscX;locus_tag=GCA000012185_00471;product=Protein IscX;gene=iscX;Parent=GCA000012185_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005659903.1,SO:0001217,UniParc:UPI000039AE5E,UniRef:UniRef100_A0A0C5F3W0,UniRef:UniRef90_A0A3S4VD77
contig_1	Pyrodigal	gene	463662	464003	.	-	.	ID=GCA000012185_00472_gene;locus_tag=GCA000012185_00472;gene=fdx
contig_1	Pyrodigal	CDS	463662	464003	.	-	0	ID=GCA000012185_00472;Name=ISC system 2Fe-2S type ferredoxin;locus_tag=GCA000012185_00472;product=ISC system 2Fe-2S type ferredoxin;Dbxref=GO:0005829,GO:0009055,GO:0016226,GO:0022900,GO:0046872,GO:0051537,GO:0140647;gene=fdx;Parent=GCA000012185_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0633,RefSeq:WP_005656373.1,SO:0001217,UniParc:UPI000016859D,UniRef:UniRef100_P44428,UniRef:UniRef50_P44428,UniRef:UniRef90_P44428
contig_1	Pyrodigal	gene	464043	465902	.	-	.	ID=GCA000012185_00473_gene;locus_tag=GCA000012185_00473;gene=hscA
contig_1	Pyrodigal	CDS	464043	465902	.	-	0	ID=GCA000012185_00473;Name=Fe-S protein assembly chaperone HscA;locus_tag=GCA000012185_00473;product=Fe-S protein assembly chaperone HscA;Dbxref=GO:0005515,GO:0005524,GO:0005829,GO:0006457,GO:0016226,GO:0016887,GO:0031072,GO:0042026,GO:0044183,GO:0051082,GO:0051085,GO:0140662;gene=hscA;Parent=GCA000012185_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_011272011.1,SO:0001217,UniParc:UPI000053E0A3,UniRef:UniRef100_Q4QNG9,UniRef:UniRef50_P44669,UniRef:UniRef90_P44669;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	465921	466607	.	-	.	ID=GCA000012185_00474_gene;locus_tag=GCA000012185_00474
contig_1	Pyrodigal	CDS	465921	466607	.	-	0	ID=GCA000012185_00474;Name=putative protein HI_0374;locus_tag=GCA000012185_00474;product=putative protein HI_0374;Parent=GCA000012185_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005669116.1,SO:0001217,UniParc:UPI000053E0A4,UniRef:UniRef100_A0A1Q5Y2I6,UniRef:UniRef50_P44670,UniRef:UniRef90_P44670
contig_1	Pyrodigal	gene	466658	467182	.	-	.	ID=GCA000012185_00475_gene;locus_tag=GCA000012185_00475;gene=hscB
contig_1	Pyrodigal	CDS	466658	467182	.	-	0	ID=GCA000012185_00475;Name=Fe-S protein assembly co-chaperone HscB;locus_tag=GCA000012185_00475;product=Fe-S protein assembly co-chaperone HscB;Dbxref=GO:0001671,GO:0006457,GO:0044571,GO:0051087,GO:0051259,GO:0097428,GO:1990230;gene=hscB;Parent=GCA000012185_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_011272012.1,SO:0001217,UniParc:UPI00003CD95A,UniRef:UniRef100_A0A2R3FVA4,UniRef:UniRef50_Q57006,UniRef:UniRef90_Q57006
contig_1	Pyrodigal	gene	467195	467518	.	-	.	ID=GCA000012185_00476_gene;locus_tag=GCA000012185_00476;gene=iscA
contig_1	Pyrodigal	CDS	467195	467518	.	-	0	ID=GCA000012185_00476;Name=iron-sulfur cluster assembly protein IscA;locus_tag=GCA000012185_00476;product=iron-sulfur cluster assembly protein IscA;Dbxref=GO:0005737,GO:0005829,GO:0016226,GO:0046872,GO:0051536,GO:0051537,GO:0097428;gene=iscA;Parent=GCA000012185_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_005649164.1,SO:0001217,UniParc:UPI000039AE63,UniRef:UniRef100_A0A0D0IIZ3,UniRef:UniRef50_Q7CQ12,UniRef:UniRef90_P44672
contig_1	Pyrodigal	gene	467576	467956	.	-	.	ID=GCA000012185_00477_gene;locus_tag=GCA000012185_00477;gene=iscU
contig_1	Pyrodigal	CDS	467576	467956	.	-	0	ID=GCA000012185_00477;Name=Iron-sulfur cluster assembly scaffold protein IscU;locus_tag=GCA000012185_00477;product=Iron-sulfur cluster assembly scaffold protein IscU;Dbxref=GO:0005737,GO:0006879,GO:0008198,GO:0016226,GO:0051537;gene=iscU;Parent=GCA000012185_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_005654861.1,SO:0001217,UniParc:UPI0000130122,UniRef:UniRef100_Q57074,UniRef:UniRef50_Q57074,UniRef:UniRef90_Q57074
contig_1	Pyrodigal	gene	468016	469230	.	-	.	ID=GCA000012185_00478_gene;locus_tag=GCA000012185_00478;gene=iscS
contig_1	Pyrodigal	CDS	468016	469230	.	-	0	ID=GCA000012185_00478;Name=IscS subfamily cysteine desulfurase;locus_tag=GCA000012185_00478;product=IscS subfamily cysteine desulfurase;Dbxref=GO:0005737,GO:0030170,GO:0031071,GO:0044571,GO:0046872,GO:0051537;gene=iscS;Parent=GCA000012185_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_005649169.1,SO:0001217,UniParc:UPI00003CD959,UniRef:UniRef100_Q4QNG4,UniRef:UniRef50_P25374,UniRef:UniRef90_Q57337;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	469297	469749	.	-	.	ID=GCA000012185_00479_gene;locus_tag=GCA000012185_00479;gene=iscR
contig_1	Pyrodigal	CDS	469297	469749	.	-	0	ID=GCA000012185_00479;Name=Fe-S cluster assembly transcriptional regulator IscR;locus_tag=GCA000012185_00479;product=Fe-S cluster assembly transcriptional regulator IscR;Dbxref=GO:0003690,GO:0003700,GO:0005829,GO:0006355;gene=iscR;Parent=GCA000012185_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_005654871.1,SO:0001217,UniParc:UPI00003CD958,UniRef:UniRef100_A0A0H3PES0,UniRef:UniRef50_P44675,UniRef:UniRef90_P44675
contig_1	Pyrodigal	gene	469802	470527	.	-	.	ID=GCA000012185_00480_gene;locus_tag=GCA000012185_00480;gene=trmJ
contig_1	Pyrodigal	CDS	469802	470527	.	-	0	ID=GCA000012185_00480;Name=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;locus_tag=GCA000012185_00480;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;Dbxref=GO:0002128,GO:0003723,GO:0005829,GO:0006396,GO:0008173;gene=trmJ;Parent=GCA000012185_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0565,COG:J,KEGG:K15396,RefSeq:WP_005654873.1,SO:0001217,UniParc:UPI000045E868,UniRef:UniRef100_A0A0H3PNC1,UniRef:UniRef50_P44676,UniRef:UniRef90_P44676;ec_number=2.1.1.200
contig_1	tRNAscan-SE	gene	470638	470713	.	-	.	ID=GCA000012185_00481_gene;locus_tag=GCA000012185_00481;gene=trnK
contig_1	tRNAscan-SE	tRNA	470638	470713	.	-	.	ID=GCA000012185_00481;Name=tRNA-Lys(ctt);locus_tag=GCA000012185_00481;product=tRNA-Lys(ctt);gene=trnK;anti_codon=ctt;amino_acid=Lys;Parent=GCA000012185_00481_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	470737	470812	.	-	.	ID=GCA000012185_00482_gene;locus_tag=GCA000012185_00482;gene=trnK
contig_1	tRNAscan-SE	tRNA	470737	470812	.	-	.	ID=GCA000012185_00482;Name=tRNA-Lys(ttt);locus_tag=GCA000012185_00482;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000012185_00482_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	470967	471428	.	-	.	ID=GCA000012185_00483_gene;locus_tag=GCA000012185_00483;gene=pal
contig_1	Pyrodigal	CDS	470967	471428	.	-	0	ID=GCA000012185_00483;Name=peptidoglycan-associated lipoprotein Pal;locus_tag=GCA000012185_00483;product=peptidoglycan-associated lipoprotein Pal;Dbxref=GO:0009279,GO:0051301;gene=pal;Parent=GCA000012185_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_005652235.1,SO:0001217,UniParc:UPI0000131257,UniRef:UniRef100_P10324,UniRef:UniRef50_P10324,UniRef:UniRef90_P10324
contig_1	Pyrodigal	gene	471452	472735	.	-	.	ID=GCA000012185_00484_gene;locus_tag=GCA000012185_00484;gene=tolB
contig_1	Pyrodigal	CDS	471452	472735	.	-	0	ID=GCA000012185_00484;Name=Tol-Pal system beta propeller repeat protein TolB;locus_tag=GCA000012185_00484;product=Tol-Pal system beta propeller repeat protein TolB;Dbxref=GO:0005215,GO:0017038,GO:0042597,GO:0051301;gene=tolB;Parent=GCA000012185_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0823,COG:U,RefSeq:WP_011272014.1,SO:0001217,UniParc:UPI000053E0A6,UniRef:UniRef100_Q4QNG0,UniRef:UniRef50_P44677,UniRef:UniRef90_P44677
contig_1	Pyrodigal	gene	472777	474003	.	-	.	ID=GCA000012185_00485_gene;locus_tag=GCA000012185_00485;gene=tolA
contig_1	Pyrodigal	CDS	472777	474003	.	-	0	ID=GCA000012185_00485;Name=cell envelope integrity protein TolA;locus_tag=GCA000012185_00485;product=cell envelope integrity protein TolA;Dbxref=GO:0016020,GO:0019534,GO:0043213;gene=tolA;Parent=GCA000012185_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03646,RefSeq:WP_011272015.1,SO:0001217,UniParc:UPI000053E0A7,UniRef:UniRef100_Q4QNF9,UniRef:UniRef50_P44678,UniRef:UniRef90_A5UGQ2
contig_1	Pyrodigal	gene	474019	474438	.	-	.	ID=GCA000012185_00486_gene;locus_tag=GCA000012185_00486;gene=tolR
contig_1	Pyrodigal	CDS	474019	474438	.	-	0	ID=GCA000012185_00486;Name=colicin uptake protein TolR;locus_tag=GCA000012185_00486;product=colicin uptake protein TolR;Dbxref=GO:0005886,GO:0015031,GO:0022857,GO:0051301;gene=tolR;Parent=GCA000012185_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_005649190.1,SO:0001217,UniParc:UPI0000137115,UniRef:UniRef100_P43769,UniRef:UniRef50_P43769,UniRef:UniRef90_P43769
contig_1	Pyrodigal	gene	474509	475195	.	-	.	ID=GCA000012185_00487_gene;locus_tag=GCA000012185_00487;gene=tolQ
contig_1	Pyrodigal	CDS	474509	475195	.	-	0	ID=GCA000012185_00487;Name=protein TolQ;locus_tag=GCA000012185_00487;product=protein TolQ;Dbxref=GO:0005886,GO:0016020,GO:0017038,GO:0043213,GO:0051301;gene=tolQ;Parent=GCA000012185_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_005649191.1,SO:0001217,UniParc:UPI0000137112,UniRef:UniRef100_P43768,UniRef:UniRef50_P0ABU9,UniRef:UniRef90_P43768
contig_1	Pyrodigal	gene	475212	475622	.	-	.	ID=GCA000012185_00488_gene;locus_tag=GCA000012185_00488;gene=ybgC
contig_1	Pyrodigal	CDS	475212	475622	.	-	0	ID=GCA000012185_00488;Name=tol-pal system-associated acyl-CoA thioesterase;locus_tag=GCA000012185_00488;product=tol-pal system-associated acyl-CoA thioesterase;Dbxref=GO:0005737,GO:0047617;gene=ybgC;Parent=GCA000012185_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649192.1,SO:0001217,UniParc:UPI000045EA9F,UniRef:UniRef100_A0A0C5F3U8,UniRef:UniRef50_P44679,UniRef:UniRef90_P44679;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	475947	477869	.	+	.	ID=GCA000012185_00489_gene;locus_tag=GCA000012185_00489;gene=yoaA
contig_1	Pyrodigal	CDS	475947	477869	.	+	0	ID=GCA000012185_00489;Name=ATP-dependent DNA helicase YoaA;locus_tag=GCA000012185_00489;product=ATP-dependent DNA helicase YoaA;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0046872,GO:0051536,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=yoaA;Parent=GCA000012185_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1199,COG:L,RefSeq:WP_011272016.1,SO:0001217,UniParc:UPI000053E0A8,UniRef:UniRef100_Q4QNF5,UniRef:UniRef50_P44680,UniRef:UniRef90_P44680;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	477882	478592	.	+	.	ID=GCA000012185_00490_gene;locus_tag=GCA000012185_00490;gene=tsaB
contig_1	Pyrodigal	CDS	477882	478592	.	+	0	ID=GCA000012185_00490;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000012185_00490;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949,GO:0005829;gene=tsaB;Parent=GCA000012185_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_011272017.1,SO:0001217,UniParc:UPI00003CD87D,UniRef:UniRef100_Q4QNF4,UniRef:UniRef50_P43990,UniRef:UniRef90_P43990;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	478617	479168	.	+	.	ID=GCA000012185_00491_gene;locus_tag=GCA000012185_00491;gene=slp
contig_1	Pyrodigal	CDS	478617	479168	.	+	0	ID=GCA000012185_00491;Name=putative protein HI_0389;locus_tag=GCA000012185_00491;product=putative protein HI_0389;Dbxref=GO:0019867;gene=slp;Parent=GCA000012185_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3065,COG:M,RefSeq:WP_011272018.1,SO:0001217,UniParc:UPI00003CD87C,UniRef:UniRef100_Q4QNF3,UniRef:UniRef50_P43991,UniRef:UniRef90_P43991
contig_1	Pyrodigal	gene	479210	480898	.	+	.	ID=GCA000012185_00492_gene;locus_tag=GCA000012185_00492;gene=fadD
contig_1	Pyrodigal	CDS	479210	480898	.	+	0	ID=GCA000012185_00492;Name=long-chain-fatty-acid--CoA ligase FadD;locus_tag=GCA000012185_00492;product=long-chain-fatty-acid--CoA ligase FadD;Dbxref=GO:0004467,GO:0005524,GO:0006635,GO:0016020;gene=fadD;Parent=GCA000012185_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_011272019.1,SO:0001217,UniParc:UPI000053E0A9,UniRef:UniRef100_Q4QNF2,UniRef:UniRef50_P46450,UniRef:UniRef90_P46450;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	480954	482096	.	+	.	ID=GCA000012185_00493_gene;locus_tag=GCA000012185_00493;gene=rnd
contig_1	Pyrodigal	CDS	480954	482096	.	+	0	ID=GCA000012185_00493;Name=ribonuclease D;locus_tag=GCA000012185_00493;product=ribonuclease D;Dbxref=GO:0000166,GO:0003676,GO:0005737,GO:0006396,GO:0008408,GO:0033890,GO:0042780;gene=rnd;Parent=GCA000012185_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0349,COG:J,KEGG:K03684,RefSeq:WP_011272020.1,SO:0001217,UniParc:UPI00003CD87A,UniRef:UniRef100_Q4QNF1,UniRef:UniRef50_P44442,UniRef:UniRef90_P44442;ec_number=3.1.13.5
contig_1	Pyrodigal	gene	482139	484007	.	-	.	ID=GCA000012185_00494_gene;locus_tag=GCA000012185_00494;gene=oafA
contig_1	Pyrodigal	CDS	482139	484007	.	-	0	ID=GCA000012185_00494;Name=Long-chain-fatty-acid--CoA ligase;locus_tag=GCA000012185_00494;product=Long-chain-fatty-acid--CoA ligase;gene=oafA;Parent=GCA000012185_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_011272021.1,SO:0001217,UniParc:UPI000053E0AA,UniRef:UniRef100_Q4QNF0,UniRef:UniRef50_A5UGQ8,UniRef:UniRef90_A5UGQ8
contig_1	Pyrodigal	gene	484081	485172	.	-	.	ID=GCA000012185_00495_gene;locus_tag=GCA000012185_00495;gene=ychF
contig_1	Pyrodigal	CDS	484081	485172	.	-	0	ID=GCA000012185_00495;Name=redox-regulated ATPase YchF;locus_tag=GCA000012185_00495;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0005737,GO:0016887,GO:0043023,GO:0046872;gene=ychF;Parent=GCA000012185_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_005649212.1,SO:0001217,UniParc:UPI00003CD9F8,UniRef:UniRef100_A0A2S9REK9,UniRef:UniRef50_P44681,UniRef:UniRef90_P44681
contig_1	Pyrodigal	gene	485220	485804	.	-	.	ID=GCA000012185_00496_gene;locus_tag=GCA000012185_00496
contig_1	Pyrodigal	CDS	485220	485804	.	-	0	ID=GCA000012185_00496;Name=Peptidyl-tRNA hydrolase;locus_tag=GCA000012185_00496;product=Peptidyl-tRNA hydrolase;Parent=GCA000012185_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272022.1,SO:0001217,UniParc:UPI00003CD9F9,UniRef:UniRef100_Q4QNE8,UniRef:UniRef90_P44682
contig_1	Pyrodigal	gene	485987	486295	.	+	.	ID=GCA000012185_00497_gene;locus_tag=GCA000012185_00497;gene=rnfH
contig_1	Pyrodigal	CDS	485987	486295	.	+	0	ID=GCA000012185_00497;Name=RnfH family protein;locus_tag=GCA000012185_00497;product=RnfH family protein;gene=rnfH;Parent=GCA000012185_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2914,COG:V,KEGG:K09801,RefSeq:WP_005649214.1,SO:0001217,UniParc:UPI000013AEC3,UniRef:UniRef100_P43994,UniRef:UniRef50_A6VPR2,UniRef:UniRef90_P43994
contig_1	Pyrodigal	gene	486298	487512	.	+	.	ID=GCA000012185_00498_gene;locus_tag=GCA000012185_00498;gene=roxA
contig_1	Pyrodigal	CDS	486298	487512	.	+	0	ID=GCA000012185_00498;Name=putative ribosomal oxygenase HI_0396;locus_tag=GCA000012185_00498;product=putative ribosomal oxygenase HI_0396;Dbxref=GO:0016706,GO:0046872;gene=roxA;Parent=GCA000012185_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2850,COG:J,KEGG:K18850,RefSeq:WP_005693774.1,SO:0001217,UniParc:UPI000013A676,UniRef:UniRef100_P44683,UniRef:UniRef50_P44683,UniRef:UniRef90_P44683;ec_number=1.14.11.-
contig_1	Pyrodigal	gene	487514	488833	.	+	.	ID=GCA000012185_00499_gene;locus_tag=GCA000012185_00499;gene=xseA
contig_1	Pyrodigal	CDS	487514	488833	.	+	0	ID=GCA000012185_00499;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000012185_00499;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA000012185_00499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_011272023.1,SO:0001217,UniParc:UPI000053E0AB,UniRef:UniRef100_Q4QNE5,UniRef:UniRef50_P04994,UniRef:UniRef90_P43913;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	489031	489663	.	+	.	ID=GCA000012185_00500_gene;locus_tag=GCA000012185_00500;gene=nudF
contig_1	Pyrodigal	CDS	489031	489663	.	+	0	ID=GCA000012185_00500;Name=ADP-ribose diphosphatase;locus_tag=GCA000012185_00500;product=ADP-ribose diphosphatase;Dbxref=GO:0005829,GO:0006753,GO:0016787,GO:0019144,GO:0019693,GO:0046872,GO:0047631;gene=nudF;Parent=GCA000012185_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_041174734.1,SO:0001217,UniParc:UPI000302375B,UniRef:UniRef100_Q4QNE4,UniRef:UniRef50_Q93K97,UniRef:UniRef90_P44684;ec_number=3.6.1.13
contig_1	Pyrodigal	gene	489673	490497	.	+	.	ID=GCA000012185_00501_gene;locus_tag=GCA000012185_00501;gene=cpdA
contig_1	Pyrodigal	CDS	489673	490497	.	+	0	ID=GCA000012185_00501;Name=3'%2C5'-cyclic-AMP phosphodiesterase;locus_tag=GCA000012185_00501;product=3'%2C5'-cyclic-AMP phosphodiesterase;Dbxref=GO:0000166,GO:0004115,GO:0046872;gene=cpdA;Parent=GCA000012185_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_011272025.1,SO:0001217,UniParc:UPI000053E0AD,UniRef:UniRef100_Q4QNE3,UniRef:UniRef50_P44685,UniRef:UniRef90_P44685;ec_number=3.1.4.53
contig_1	Pyrodigal	gene	490595	490882	.	-	.	ID=GCA000012185_00502_gene;locus_tag=GCA000012185_00502;gene=yfcZ
contig_1	Pyrodigal	CDS	490595	490882	.	-	0	ID=GCA000012185_00502;Name=UPF0381 protein HI_0400;locus_tag=GCA000012185_00502;product=UPF0381 protein HI_0400;Dbxref=GO:0005829;gene=yfcZ;Parent=GCA000012185_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3691,COG:S,RefSeq:WP_005649224.1,SO:0001217,UniParc:UPI000053E0AE,UniRef:UniRef100_Q4QNE2,UniRef:UniRef50_P44686,UniRef:UniRef90_P44686
contig_1	Pyrodigal	gene	491079	492455	.	+	.	ID=GCA000012185_00503_gene;locus_tag=GCA000012185_00503;gene=ompP1
contig_1	Pyrodigal	CDS	491079	492455	.	+	0	ID=GCA000012185_00503;Name=Outer membrane protein P1;locus_tag=GCA000012185_00503;product=Outer membrane protein P1;Dbxref=GO:0009279,GO:0015483;gene=ompP1;Parent=GCA000012185_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06076,RefSeq:WP_011272026.1,SO:0001217,UniParc:UPI00000B67EE,UniRef:UniRef100_Q9K397,UniRef:UniRef50_P43838,UniRef:UniRef90_P43838
contig_1	Pyrodigal	gene	492531	493070	.	+	.	ID=GCA000012185_00504_gene;locus_tag=GCA000012185_00504;gene=ogt
contig_1	Pyrodigal	CDS	492531	493070	.	+	0	ID=GCA000012185_00504;Name=Methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA000012185_00504;product=Methylated-DNA--protein-cysteine methyltransferase;Dbxref=GO:0003908,GO:0005737,GO:0006307,GO:0032259;gene=ogt;Parent=GCA000012185_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0350,COG:L,RefSeq:WP_041174735.1,SO:0001217,UniParc:UPI00003CD8BF,UniRef:UniRef100_Q4QNE0,UniRef:UniRef50_P44687,UniRef:UniRef90_P44687;ec_number=2.1.1.63
contig_1	Pyrodigal	gene	493067	493738	.	+	.	ID=GCA000012185_00505_gene;locus_tag=GCA000012185_00505;gene=mutH
contig_1	Pyrodigal	CDS	493067	493738	.	+	0	ID=GCA000012185_00505;Name=DNA mismatch repair endonuclease MutH;locus_tag=GCA000012185_00505;product=DNA mismatch repair endonuclease MutH;Dbxref=GO:0003677,GO:0004519,GO:0005737,GO:0006298,GO:0006304;gene=mutH;Parent=GCA000012185_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3066,COG:L,KEGG:K03573,RefSeq:WP_011272028.1,SO:0001217,UniParc:UPI000053E0B0,UniRef:UniRef100_Q4QND9,UniRef:UniRef50_P06722,UniRef:UniRef90_P44688
contig_1	Pyrodigal	gene	493746	495038	.	-	.	ID=GCA000012185_00506_gene;locus_tag=GCA000012185_00506;gene=tilS
contig_1	Pyrodigal	CDS	493746	495038	.	-	0	ID=GCA000012185_00506;Name=tRNA(Ile)-lysidine synthase;locus_tag=GCA000012185_00506;product=tRNA(Ile)-lysidine synthase;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0032267;gene=tilS;Parent=GCA000012185_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K04075,RefSeq:WP_011272029.1,SO:0001217,UniParc:UPI00003CD8C2,UniRef:UniRef100_Q4QND8,UniRef:UniRef50_P44689,UniRef:UniRef90_P44689;ec_number=6.3.4.19
contig_1	Pyrodigal	gene	495038	495142	.	-	.	ID=GCA000012185_00507_gene;locus_tag=GCA000012185_00507;gene=pdxY
contig_1	Pyrodigal	CDS	495038	495142	.	-	0	ID=GCA000012185_00507;Name=pyridoxal kinase;locus_tag=GCA000012185_00507;product=pyridoxal kinase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0008478,GO:0009443;gene=pdxY;Parent=GCA000012185_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2240,COG:H,KEGG:K00868,SO:0001217,UniParc:UPI0000E6038C,UniRef:UniRef100_A5UA83,UniRef:UniRef50_P44690,UniRef:UniRef90_P44690;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	495215	496162	.	-	.	ID=GCA000012185_00508_gene;locus_tag=GCA000012185_00508;gene=accA
contig_1	Pyrodigal	CDS	495215	496162	.	-	0	ID=GCA000012185_00508;Name=acetyl-CoA carboxylase carboxyl transferase subunit alpha;locus_tag=GCA000012185_00508;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0009317,GO:0016743,GO:2001295;gene=accA;Parent=GCA000012185_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_011272030.1,SO:0001217,UniParc:UPI000053E0B1,UniRef:UniRef100_Q4QND7,UniRef:UniRef50_P0ABD5,UniRef:UniRef90_P43872;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	496251	497036	.	-	.	ID=GCA000012185_00509_gene;locus_tag=GCA000012185_00509;gene=znuB
contig_1	Pyrodigal	CDS	496251	497036	.	-	0	ID=GCA000012185_00509;Name=zinc ABC transporter permease subunit ZnuB;locus_tag=GCA000012185_00509;product=zinc ABC transporter permease subunit ZnuB;Dbxref=GO:0005886,GO:0006829,GO:0010043,GO:0042626,GO:0043190,GO:0055085;gene=znuB;Parent=GCA000012185_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_005691433.1,SO:0001217,UniParc:UPI00003CD8C5,UniRef:UniRef100_A0A2S9S1S7,UniRef:UniRef50_P39832,UniRef:UniRef90_P44691;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	497036	497842	.	-	.	ID=GCA000012185_00510_gene;locus_tag=GCA000012185_00510;gene=znuC
contig_1	Pyrodigal	CDS	497036	497842	.	-	0	ID=GCA000012185_00510;Name=zinc ABC transporter ATP-binding protein ZnuC;locus_tag=GCA000012185_00510;product=zinc ABC transporter ATP-binding protein ZnuC;Dbxref=GO:0005524,GO:0006829,GO:0010043,GO:0015633,GO:0016887,GO:0042626,GO:0043190;gene=znuC;Parent=GCA000012185_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_011272031.1,SO:0001217,UniParc:UPI000053E0B2,UniRef:UniRef100_Q4QND5,UniRef:UniRef50_Q65UG3,UniRef:UniRef90_P44692;ec_number=7.2.2.20
contig_1	Pyrodigal	gene	498014	499441	.	+	.	ID=GCA000012185_00511_gene;locus_tag=GCA000012185_00511;gene=mepM
contig_1	Pyrodigal	CDS	498014	499441	.	+	0	ID=GCA000012185_00511;Name=murein DD-endopeptidase MepM;locus_tag=GCA000012185_00511;product=murein DD-endopeptidase MepM;Dbxref=GO:0000920,GO:0004222,GO:0005886,GO:0006508,GO:0042834,GO:0046872;gene=mepM;Parent=GCA000012185_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_011272032.1,SO:0001217,UniParc:UPI000053E0B3,UniRef:UniRef100_A0AAJ8WRB2,UniRef:UniRef50_P44693,UniRef:UniRef90_P44693;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	499556	500512	.	+	.	ID=GCA000012185_00512_gene;locus_tag=GCA000012185_00512;gene=tyrR
contig_1	Pyrodigal	CDS	499556	500512	.	+	0	ID=GCA000012185_00512;Name=HTH-type transcriptional regulatory protein TyrR;locus_tag=GCA000012185_00512;product=HTH-type transcriptional regulatory protein TyrR;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006355,GO:0009056,GO:0016887;gene=tyrR;Parent=GCA000012185_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3283,COG:KE,RefSeq:WP_005686875.1,SO:0001217,UniParc:UPI000053E0B4,UniRef:UniRef100_A5UGS4,UniRef:UniRef50_P44694,UniRef:UniRef90_P44694
contig_1	Pyrodigal	gene	500608	500883	.	-	.	ID=GCA000012185_00513_gene;locus_tag=GCA000012185_00513;gene=hfq
contig_1	Pyrodigal	CDS	500608	500883	.	-	0	ID=GCA000012185_00513;Name=RNA chaperone Hfq;locus_tag=GCA000012185_00513;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0005829,GO:0006355,GO:0043487,GO:0045974;gene=hfq;Parent=GCA000012185_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1923,COG:T,RefSeq:WP_005686877.1,SO:0001217,UniParc:UPI000053E0B5,UniRef:UniRef100_Q4QND2,UniRef:UniRef50_Q9KV11,UniRef:UniRef90_P44437
contig_1	Pyrodigal	gene	500974	501942	.	-	.	ID=GCA000012185_00514_gene;locus_tag=GCA000012185_00514;gene=rluC
contig_1	Pyrodigal	CDS	500974	501942	.	-	0	ID=GCA000012185_00514;Name=23S rRNA pseudouridine(955/2504/2580) synthase RluC;locus_tag=GCA000012185_00514;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0009982,GO:0160141;gene=rluC;Parent=GCA000012185_00514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06179,RefSeq:WP_005659830.1,SO:0001217,UniParc:UPI00014FC1E7,UniRef:UniRef100_Q4QND1,UniRef:UniRef50_P0AA39,UniRef:UniRef90_P44433;ec_number=5.4.99.24
contig_1	Pyrodigal	gene	502363	505170	.	+	.	ID=GCA000012185_00515_gene;locus_tag=GCA000012185_00515;gene=rne
contig_1	Pyrodigal	CDS	502363	505170	.	+	0	ID=GCA000012185_00515;Name=ribonuclease E;locus_tag=GCA000012185_00515;product=ribonuclease E;Dbxref=GO:0000287,GO:0003723,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0006396,GO:0006402,GO:0008033,GO:0008270,GO:0008995,GO:0009898,GO:0019843;gene=rne;Parent=GCA000012185_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,KEGG:K08300,RefSeq:WP_041174736.1,SO:0001217,UniParc:UPI00059B49A8,UniRef:UniRef100_Q4QND0,UniRef:UniRef50_P44443,UniRef:UniRef90_P44443;ec_number=3.1.26.12
contig_1	Pyrodigal	gene	505402	505614	.	+	.	ID=GCA000012185_00516_gene;locus_tag=GCA000012185_00516;gene=lomR
contig_1	Pyrodigal	CDS	505402	505614	.	+	0	ID=GCA000012185_00516;Name=putative protein HI_0414;locus_tag=GCA000012185_00516;product=putative protein HI_0414;Dbxref=GO:0009279,GO:0015288;gene=lomR;Parent=GCA000012185_00516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3637,COG:M,RefSeq:WP_005686879.1,SO:0001217,UniParc:UPI00003CD9EE,UniRef:UniRef100_A0A2R3FK40,UniRef:UniRef50_Q57392,UniRef:UniRef90_Q57392
contig_1	Infernal	regulatory_region	505726	505814	6e-10	+	.	ID=JPLKGDNPJF_108;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	505944	506735	.	+	.	ID=GCA000012185_00517_gene;locus_tag=GCA000012185_00517;gene=thiM
contig_1	Pyrodigal	CDS	505944	506735	.	+	0	ID=GCA000012185_00517;Name=hydroxyethylthiazole kinase;locus_tag=GCA000012185_00517;product=hydroxyethylthiazole kinase;Dbxref=GO:0000287,GO:0004417,GO:0005524,GO:0009228,GO:0009229;gene=thiM;Parent=GCA000012185_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2145,COG:H,KEGG:K00878,RefSeq:WP_005686880.1,SO:0001217,UniParc:UPI0001A3F7AC,UniRef:UniRef100_Q4QNC8,UniRef:UniRef50_Q723Z1,UniRef:UniRef90_Q57233;ec_number=2.7.1.50
contig_1	Pyrodigal	gene	506728	507537	.	+	.	ID=GCA000012185_00518_gene;locus_tag=GCA000012185_00518;gene=thiD
contig_1	Pyrodigal	CDS	506728	507537	.	+	0	ID=GCA000012185_00518;Name=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;locus_tag=GCA000012185_00518;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229;gene=thiD;Parent=GCA000012185_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_005686881.1,SO:0001217,UniParc:UPI000053E0B9,UniRef:UniRef100_A0A2R3GGI1,UniRef:UniRef50_P44697,UniRef:UniRef90_P44697;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	507548	508228	.	+	.	ID=GCA000012185_00519_gene;locus_tag=GCA000012185_00519;gene=thiE
contig_1	Pyrodigal	CDS	507548	508228	.	+	0	ID=GCA000012185_00519;Name=Thiamine-phosphate synthase;locus_tag=GCA000012185_00519;product=Thiamine-phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000012185_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0352,COG:H,RefSeq:WP_011272036.1,SO:0001217,UniParc:UPI00003CD9EB,UniRef:UniRef100_Q4QNC6,UniRef:UniRef50_P71350,UniRef:UniRef90_P71350;ec_number=2.5.1.3
contig_1	Pyrodigal	gene	508212	509516	.	+	.	ID=GCA000012185_00520_gene;locus_tag=GCA000012185_00520
contig_1	Pyrodigal	CDS	508212	509516	.	+	0	ID=GCA000012185_00520;Name=Putative metabolite transport protein HI_0418;locus_tag=GCA000012185_00520;product=Putative metabolite transport protein HI_0418;Dbxref=GO:0005886,GO:0022857;Parent=GCA000012185_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272037.1,SO:0001217,UniParc:UPI000053E0BA,UniRef:UniRef100_Q4QNC5,UniRef:UniRef50_P44699,UniRef:UniRef90_P44699
contig_1	Pyrodigal	gene	509685	511064	.	+	.	ID=GCA000012185_00521_gene;locus_tag=GCA000012185_00521;gene=yegQ
contig_1	Pyrodigal	CDS	509685	511064	.	+	0	ID=GCA000012185_00521;Name=tRNA 5-hydroxyuridine modification protein YegQ;locus_tag=GCA000012185_00521;product=tRNA 5-hydroxyuridine modification protein YegQ;Dbxref=GO:0005829,GO:0006508,GO:0008033,GO:0008233;gene=yegQ;Parent=GCA000012185_00521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_011272039.1,SO:0001217,UniParc:UPI000053E0BC,UniRef:UniRef100_Q4QNC3,UniRef:UniRef50_P76403,UniRef:UniRef90_P44700;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	511098	512417	.	-	.	ID=GCA000012185_00522_gene;locus_tag=GCA000012185_00522;gene=srmB
contig_1	Pyrodigal	CDS	511098	512417	.	-	0	ID=GCA000012185_00522;Name=ATP-dependent RNA helicase SrmB;locus_tag=GCA000012185_00522;product=ATP-dependent RNA helicase SrmB;Dbxref=GO:0000027,GO:0003676,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0016887,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=srmB;Parent=GCA000012185_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_011272040.1,SO:0001217,UniParc:UPI000053E0BD,UniRef:UniRef100_Q4QNC2,UniRef:UniRef50_P21507,UniRef:UniRef90_P44701;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	512463	513185	.	+	.	ID=GCA000012185_00523_gene;locus_tag=GCA000012185_00523;gene=trmN6
contig_1	Pyrodigal	CDS	512463	513185	.	+	0	ID=GCA000012185_00523;Name=tRNA1(Val) (adenine(37)-N6)-methyltransferase;locus_tag=GCA000012185_00523;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;Dbxref=GO:0003676,GO:0005737,GO:0008033,GO:0016430,GO:0032259;gene=trmN6;Parent=GCA000012185_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4123,COG:J,SO:0001217,UniParc:UPI000053E0BE,UniRef:UniRef100_Q4QNC1,UniRef:UniRef50_P44702,UniRef:UniRef90_P44702;ec_number=2.1.1.223
contig_1	Pyrodigal	gene	513216	513821	.	-	.	ID=GCA000012185_00524_gene;locus_tag=GCA000012185_00524
contig_1	Pyrodigal	CDS	513216	513821	.	-	0	ID=GCA000012185_00524;Name=Methyltransferase;locus_tag=GCA000012185_00524;product=Methyltransferase;Parent=GCA000012185_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377JI70
contig_1	Pyrodigal	gene	513968	515335	.	+	.	ID=GCA000012185_00525_gene;locus_tag=GCA000012185_00525;gene=pssA
contig_1	Pyrodigal	CDS	513968	515335	.	+	0	ID=GCA000012185_00525;Name=CDP-diacylglycerol--serine O-phosphatidyltransferase;locus_tag=GCA000012185_00525;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;Dbxref=GO:0003882,GO:0005829,GO:0005886,GO:0008444,GO:0032049;gene=pssA;Parent=GCA000012185_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K00998,RefSeq:WP_005686888.1,SO:0001217,UniParc:UPI000039A58C,UniRef:UniRef100_Q4QNC0,UniRef:UniRef50_P44704,UniRef:UniRef90_P44704;ec_number=2.7.8.8
contig_1	Pyrodigal	gene	515381	516106	.	-	.	ID=GCA000012185_00526_gene;locus_tag=GCA000012185_00526;gene=fadR
contig_1	Pyrodigal	CDS	515381	516106	.	-	0	ID=GCA000012185_00526;Name=fatty acid metabolism transcriptional regulator FadR;locus_tag=GCA000012185_00526;product=fatty acid metabolism transcriptional regulator FadR;Dbxref=GO:0000062,GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006631,GO:0019217;gene=fadR;Parent=GCA000012185_00526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,RefSeq:WP_005659812.1,SO:0001217,UniParc:UPI00003CD7CB,UniRef:UniRef100_Q4QNB9,UniRef:UniRef50_P44705,UniRef:UniRef90_P44705
contig_1	Pyrodigal	gene	516231	517775	.	+	.	ID=GCA000012185_00527_gene;locus_tag=GCA000012185_00527;gene=nhaB
contig_1	Pyrodigal	CDS	516231	517775	.	+	0	ID=GCA000012185_00527;Name=Na(+)/H(+) antiporter NhaB;locus_tag=GCA000012185_00527;product=Na(+)/H(+) antiporter NhaB;Dbxref=GO:0005886,GO:0006814,GO:0015385,GO:0016020;gene=nhaB;Parent=GCA000012185_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3067,COG:CP,KEGG:K03314,RefSeq:WP_038440590.1,SO:0001217,UniParc:UPI000173AB2F,UniRef:UniRef100_Q4QNB8,UniRef:UniRef50_Q9I2S5,UniRef:UniRef90_P44706
contig_1	Pyrodigal	gene	517785	518318	.	+	.	ID=GCA000012185_00528_gene;locus_tag=GCA000012185_00528;gene=dsbB
contig_1	Pyrodigal	CDS	517785	518318	.	+	0	ID=GCA000012185_00528;Name=disulfide bond formation protein DsbB;locus_tag=GCA000012185_00528;product=disulfide bond formation protein DsbB;Dbxref=GO:0005886,GO:0006457,GO:0009055,GO:0015035,GO:0016020;gene=dsbB;Parent=GCA000012185_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1495,COG:O,KEGG:K03611,RefSeq:WP_011272043.1,SO:0001217,UniParc:UPI00003CD7C8,UniRef:UniRef100_Q4QNB7,UniRef:UniRef50_P44707,UniRef:UniRef90_P44707;ec_number=1.8.5.9
contig_1	Pyrodigal	gene	518373	520205	.	-	.	ID=GCA000012185_00529_gene;locus_tag=GCA000012185_00529;gene=glmS
contig_1	Pyrodigal	CDS	518373	520205	.	-	0	ID=GCA000012185_00529;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000012185_00529;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000012185_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0449,COG:M,RefSeq:WP_005686891.1,SO:0001217,UniParc:UPI000053E0C0,UniRef:UniRef100_A0A2R3FWM1,UniRef:UniRef50_P44708,UniRef:UniRef90_P44708;ec_number=2.6.1.16
contig_1	Pyrodigal	gene	520318	520590	.	-	.	ID=GCA000012185_00530_gene;locus_tag=GCA000012185_00530;gene=hup
contig_1	Pyrodigal	CDS	520318	520590	.	-	0	ID=GCA000012185_00530;Name=DNA-binding protein HU;locus_tag=GCA000012185_00530;product=DNA-binding protein HU;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hup;Parent=GCA000012185_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_005630954.1,SO:0001217,UniParc:UPI0000128F0F,UniRef:UniRef100_P43722,UniRef:UniRef50_P28080,UniRef:UniRef90_P43722
contig_1	Pyrodigal	gene	520730	521320	.	-	.	ID=GCA000012185_00531_gene;locus_tag=GCA000012185_00531;gene=yjaG
contig_1	Pyrodigal	CDS	520730	521320	.	-	0	ID=GCA000012185_00531;Name=putative protein HI_0431;locus_tag=GCA000012185_00531;product=putative protein HI_0431;gene=yjaG;Parent=GCA000012185_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3068,COG:S,KEGG:K09891,RefSeq:WP_005686892.1,SO:0001217,UniParc:UPI000053E0C2,UniRef:UniRef100_A0A2R3GLZ6,UniRef:UniRef50_P44709,UniRef:UniRef90_P44709
contig_1	Pyrodigal	gene	521356	522150	.	-	.	ID=GCA000012185_00532_gene;locus_tag=GCA000012185_00532;gene=nudC
contig_1	Pyrodigal	CDS	521356	522150	.	-	0	ID=GCA000012185_00532;Name=NAD(+) diphosphatase;locus_tag=GCA000012185_00532;product=NAD(+) diphosphatase;Dbxref=GO:0000210,GO:0000287,GO:0006734,GO:0006742,GO:0008270,GO:0016787,GO:0019677,GO:0030145,GO:0035529,GO:0110153;gene=nudC;Parent=GCA000012185_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2816,COG:F,KEGG:K03426,RefSeq:WP_005686893.1,SO:0001217,UniParc:UPI000053E0C3,UniRef:UniRef100_Q4QNB3,UniRef:UniRef50_P57965,UniRef:UniRef90_Q4QNB3;ec_number=3.6.1.22
contig_1	Pyrodigal	gene	522217	522813	.	-	.	ID=GCA000012185_00533_gene;locus_tag=GCA000012185_00533;gene=nfuA
contig_1	Pyrodigal	CDS	522217	522813	.	-	0	ID=GCA000012185_00533;Name=NfuA family Fe-S biogenesis protein;locus_tag=GCA000012185_00533;product=NfuA family Fe-S biogenesis protein;Dbxref=GO:0005506,GO:0016226,GO:0051539,GO:0051604,GO:0106035;gene=nfuA;Parent=GCA000012185_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005410314,BlastRules:WP_009874494,BlastRules:WP_011091592,BlastRules:WP_011126831,BlastRules:WP_011283110,BlastRules:WP_011672727,BlastRules:WP_011737804,BlastRules:WP_041943809,COG:COG0694,COG:O,RefSeq:WP_005649300.1,SO:0001217,UniParc:UPI000045EAB2,UniRef:UniRef100_Q4QNB2,UniRef:UniRef50_Q8DDU2,UniRef:UniRef90_P31774
contig_1	Pyrodigal	gene	522889	523575	.	-	.	ID=GCA000012185_00534_gene;locus_tag=GCA000012185_00534;gene=comF
contig_1	Pyrodigal	CDS	522889	523575	.	-	0	ID=GCA000012185_00534;Name=Competence protein F;locus_tag=GCA000012185_00534;product=Competence protein F;Dbxref=GO:0030420;gene=comF;Parent=GCA000012185_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1040,COG:R,KEGG:K02242,RefSeq:WP_011272045.1,SO:0001217,UniParc:UPI00004E1BD9,UniRef:UniRef100_Q5D8D4,UniRef:UniRef50_P31773,UniRef:UniRef90_P31773
contig_1	Pyrodigal	gene	523588	524925	.	-	.	ID=GCA000012185_00535_gene;locus_tag=GCA000012185_00535;gene=comE
contig_1	Pyrodigal	CDS	523588	524925	.	-	0	ID=GCA000012185_00535;Name=Competence protein E;locus_tag=GCA000012185_00535;product=Competence protein E;Dbxref=GO:0009279,GO:0009306,GO:0030420;gene=comE;Parent=GCA000012185_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272046.1,SO:0001217,UniParc:UPI00004E1BD8,UniRef:UniRef100_Q5D8D5,UniRef:UniRef50_P31772,UniRef:UniRef90_P31772
contig_1	Pyrodigal	gene	524935	525348	.	-	.	ID=GCA000012185_00536_gene;locus_tag=GCA000012185_00536
contig_1	Pyrodigal	CDS	524935	525348	.	-	0	ID=GCA000012185_00536;Name=Competence protein D;locus_tag=GCA000012185_00536;product=Competence protein D;Parent=GCA000012185_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272047.1,SO:0001217,UniParc:UPI00004E1BD7,UniRef:UniRef100_Q5D8D6,UniRef:UniRef50_P31771,UniRef:UniRef90_A0A0D0IEP2
contig_1	Pyrodigal	gene	525345	525866	.	-	.	ID=GCA000012185_00537_gene;locus_tag=GCA000012185_00537;gene=comC
contig_1	Pyrodigal	CDS	525345	525866	.	-	0	ID=GCA000012185_00537;Name=competence protein ComC;locus_tag=GCA000012185_00537;product=competence protein ComC;Dbxref=GO:0030420;gene=comC;Parent=GCA000012185_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693726,RefSeq:WP_011272048.1,SO:0001217,UniParc:UPI00004E1BD6,UniRef:UniRef100_Q5D8D7,UniRef:UniRef50_P31770,UniRef:UniRef90_P31770
contig_1	Pyrodigal	gene	525863	526369	.	-	.	ID=GCA000012185_00538_gene;locus_tag=GCA000012185_00538;gene=comB
contig_1	Pyrodigal	CDS	525863	526369	.	-	0	ID=GCA000012185_00538;Name=competence protein ComB;locus_tag=GCA000012185_00538;product=competence protein ComB;Dbxref=GO:0030420;gene=comB;Parent=GCA000012185_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693724,RefSeq:WP_011272049.1,SO:0001217,UniParc:UPI00003CDA47,UniRef:UniRef100_A0A2R3FWB8,UniRef:UniRef50_P31769,UniRef:UniRef90_P31769
contig_1	Pyrodigal	gene	526370	527167	.	-	.	ID=GCA000012185_00539_gene;locus_tag=GCA000012185_00539;gene=comA
contig_1	Pyrodigal	CDS	526370	527167	.	-	0	ID=GCA000012185_00539;Name=Competence protein A;locus_tag=GCA000012185_00539;product=Competence protein A;Dbxref=GO:0030420;gene=comA;Parent=GCA000012185_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4972,COG:NU,RefSeq:WP_011272050.1,SO:0001217,UniParc:UPI00004E1BD4,UniRef:UniRef100_Q5D8D9,UniRef:UniRef50_P31768,UniRef:UniRef90_P31768
contig_1	Pyrodigal	gene	527266	529860	.	+	.	ID=GCA000012185_00540_gene;locus_tag=GCA000012185_00540;gene=mrcA
contig_1	Pyrodigal	CDS	527266	529860	.	+	0	ID=GCA000012185_00540;Name=Penicillin-binding protein 1A;locus_tag=GCA000012185_00540;product=Penicillin-binding protein 1A;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0030288,GO:0046677,GO:0071555;gene=mrcA;Parent=GCA000012185_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5009,COG:M,KEGG:K05366,RefSeq:WP_011272051.1,SO:0001217,UniParc:UPI000053E0C4,UniRef:UniRef100_A0A2S9S7S9,UniRef:UniRef50_P31776,UniRef:UniRef90_P31776;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	529933	530778	.	+	.	ID=GCA000012185_00541_gene;locus_tag=GCA000012185_00541;gene=rlmJ
contig_1	Pyrodigal	CDS	529933	530778	.	+	0	ID=GCA000012185_00541;Name=Ribosomal RNA large subunit methyltransferase J;locus_tag=GCA000012185_00541;product=Ribosomal RNA large subunit methyltransferase J;Dbxref=GO:0003723,GO:0005829,GO:0036307,GO:0070475;gene=rlmJ;Parent=GCA000012185_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2961,COG:J,KEGG:K07115,RefSeq:WP_011272052.1,SO:0001217,UniParc:UPI000053E0C5,UniRef:UniRef100_A0A2S9S7X5,UniRef:UniRef50_P37634,UniRef:UniRef90_P31777;ec_number=2.1.1.266
contig_1	Pyrodigal	gene	530947	531276	.	+	.	ID=GCA000012185_00542_gene;locus_tag=GCA000012185_00542;gene=ybaB
contig_1	Pyrodigal	CDS	530947	531276	.	+	0	ID=GCA000012185_00542;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000012185_00542;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA000012185_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,KEGG:K09747,RefSeq:WP_005629464.1,SO:0001217,UniParc:UPI000013A2AB,UniRef:UniRef100_P44711,UniRef:UniRef50_P44711,UniRef:UniRef90_P44711
contig_1	Pyrodigal	gene	531407	532009	.	+	.	ID=GCA000012185_00543_gene;locus_tag=GCA000012185_00543;gene=recR
contig_1	Pyrodigal	CDS	531407	532009	.	+	0	ID=GCA000012185_00543;Name=recombination mediator RecR;locus_tag=GCA000012185_00543;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000012185_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,RefSeq:WP_005626527.1,SO:0001217,UniParc:UPI00001335C9,UniRef:UniRef100_P44712,UniRef:UniRef50_P44712,UniRef:UniRef90_P44712
contig_1	Pyrodigal	gene	532025	533980	.	+	.	ID=GCA000012185_00544_gene;locus_tag=GCA000012185_00544;gene=topB
contig_1	Pyrodigal	CDS	532025	533980	.	+	0	ID=GCA000012185_00544;Name=DNA topoisomerase 3;locus_tag=GCA000012185_00544;product=DNA topoisomerase 3;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0006265,GO:0006281,GO:0006310,GO:0043597;gene=topB;Parent=GCA000012185_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0550,COG:L,RefSeq:WP_011272053.1,SO:0001217,UniParc:UPI000053E0C6,UniRef:UniRef100_A0A2R3G1Y0,UniRef:UniRef50_P43704,UniRef:UniRef90_P43704;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	534089	534430	.	+	.	ID=GCA000012185_00545_gene;locus_tag=GCA000012185_00545;gene=secG
contig_1	Pyrodigal	CDS	534089	534430	.	+	0	ID=GCA000012185_00545;Name=preprotein translocase subunit SecG;locus_tag=GCA000012185_00545;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0043952,GO:0065002;gene=secG;Parent=GCA000012185_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_005649335.1,SO:0001217,UniParc:UPI000039AE9A,UniRef:UniRef100_A0A2V0RVI5,UniRef:UniRef50_P0AG99,UniRef:UniRef90_P44713
contig_1	tRNAscan-SE	gene	534455	534540	.	+	.	ID=GCA000012185_00546_gene;locus_tag=GCA000012185_00546;gene=trnL
contig_1	tRNAscan-SE	tRNA	534455	534540	.	+	.	ID=GCA000012185_00546;Name=tRNA-Leu(gag);locus_tag=GCA000012185_00546;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000012185_00546_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	534975	536645	.	-	.	ID=GCA000012185_00547_gene;locus_tag=GCA000012185_00547;gene=fruA
contig_1	Pyrodigal	CDS	534975	536645	.	-	0	ID=GCA000012185_00547;Name=PTS system fructose-specific EIIB'BC component;locus_tag=GCA000012185_00547;product=PTS system fructose-specific EIIB'BC component;Dbxref=GO:0005351,GO:0005886,GO:0009401,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gene=fruA;Parent=GCA000012185_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3925,COG:GT,RefSeq:WP_011272054.1,SO:0001217,UniParc:UPI00003CD848,UniRef:UniRef100_A0A2R3G0Y2,UniRef:UniRef50_Q9KM72,UniRef:UniRef90_P44714
contig_1	Pyrodigal	gene	536647	537588	.	-	.	ID=GCA000012185_00548_gene;locus_tag=GCA000012185_00548;gene=fruK
contig_1	Pyrodigal	CDS	536647	537588	.	-	0	ID=GCA000012185_00548;Name=1-phosphofructokinase;locus_tag=GCA000012185_00548;product=1-phosphofructokinase;Dbxref=GO:0005524,GO:0005829,GO:0008443,GO:0008662,GO:0016773;gene=fruK;Parent=GCA000012185_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_011272055.1,SO:0001217,UniParc:UPI00003CD849,UniRef:UniRef100_A0A2R3FWC7,UniRef:UniRef50_P44330,UniRef:UniRef90_P44330;ec_number=2.7.1.56
contig_1	Pyrodigal	gene	537590	539089	.	-	.	ID=GCA000012185_00549_gene;locus_tag=GCA000012185_00549;gene=fruB
contig_1	Pyrodigal	CDS	537590	539089	.	-	0	ID=GCA000012185_00549;Name=fused PTS fructose transporter subunit IIA/HPr protein;locus_tag=GCA000012185_00549;product=fused PTS fructose transporter subunit IIA/HPr protein;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0090563;gene=fruB;Parent=GCA000012185_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,RefSeq:WP_011272056.1,SO:0001217,UniParc:UPI00003CD84A,UniRef:UniRef100_A0A2R3FWN5,UniRef:UniRef50_P44715,UniRef:UniRef90_P44715
contig_1	Pyrodigal	gene	539161	539691	.	-	.	ID=GCA000012185_00550_gene;locus_tag=GCA000012185_00550
contig_1	Pyrodigal	CDS	539161	539691	.	-	0	ID=GCA000012185_00550;Name=putative protein HI_0449;locus_tag=GCA000012185_00550;product=putative protein HI_0449;Parent=GCA000012185_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005649345.1,SO:0001217,UniParc:UPI00014F84C7,UniRef:UniRef100_Q4QN96,UniRef:UniRef50_P43997,UniRef:UniRef90_P43997
contig_1	Pyrodigal	gene	539784	540062	.	-	.	ID=GCA000012185_00551_gene;locus_tag=GCA000012185_00551;gene=vapD
contig_1	Pyrodigal	CDS	539784	540062	.	-	0	ID=GCA000012185_00551;Name=virulence-associated protein VapD;locus_tag=GCA000012185_00551;product=virulence-associated protein VapD;Dbxref=GO:0003723,GO:0004518;gene=vapD;Parent=GCA000012185_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693712,COG:COG3309,COG:V,RefSeq:WP_011272058.1,SO:0001217,UniParc:UPI00003CD84D,UniRef:UniRef100_A0A2S9S7T6,UniRef:UniRef50_P71351,UniRef:UniRef90_P71351;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	540071	540262	.	-	.	ID=GCA000012185_00552_gene;locus_tag=GCA000012185_00552
contig_1	Pyrodigal	CDS	540071	540262	.	-	0	ID=GCA000012185_00552;Name=DUF5397 domain-containing protein;locus_tag=GCA000012185_00552;product=DUF5397 domain-containing protein;Parent=GCA000012185_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272059.1,SO:0001217,UniParc:UPI00003CD84E,UniRef:UniRef100_A0A2S9S7Y7,UniRef:UniRef50_A0A2S9S7Y7,UniRef:UniRef90_A0A2S9S7Y7
contig_1	Pyrodigal	gene	540334	541626	.	-	.	ID=GCA000012185_00553_gene;locus_tag=GCA000012185_00553;gene=paeA
contig_1	Pyrodigal	CDS	540334	541626	.	-	0	ID=GCA000012185_00553;Name=Polyamine export protein;locus_tag=GCA000012185_00553;product=Polyamine export protein;Dbxref=GO:0005886,GO:0050660;gene=paeA;Parent=GCA000012185_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,KEGG:K03699,SO:0001217,UniParc:UPI00014F84C9,UniRef:UniRef100_A0A346JZ71,UniRef:UniRef50_P44717,UniRef:UniRef90_P44717
contig_1	Pyrodigal	gene	541683	542207	.	-	.	ID=GCA000012185_00554_gene;locus_tag=GCA000012185_00554
contig_1	Pyrodigal	CDS	541683	542207	.	-	0	ID=GCA000012185_00554;Name=putative protein HI_0453;locus_tag=GCA000012185_00554;product=putative protein HI_0453;Dbxref=GO:0005886;Parent=GCA000012185_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272060.1,SO:0001217,UniParc:UPI000053E0C7,UniRef:UniRef100_A0AAJ8WB98,UniRef:UniRef50_P43999,UniRef:UniRef90_P43999
contig_1	Pyrodigal	gene	542234	543016	.	-	.	ID=GCA000012185_00555_gene;locus_tag=GCA000012185_00555;gene=tatD
contig_1	Pyrodigal	CDS	542234	543016	.	-	0	ID=GCA000012185_00555;Name=putative metal-dependent hydrolase HI_0454;locus_tag=GCA000012185_00555;product=putative metal-dependent hydrolase HI_0454;Dbxref=GO:0004536,GO:0005829,GO:0046872;gene=tatD;Parent=GCA000012185_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_011272061.1,SO:0001217,UniParc:UPI00003CDBD9,UniRef:UniRef100_A0AAJ8WBC1,UniRef:UniRef50_P44718,UniRef:UniRef90_P44718;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	543071	544054	.	-	.	ID=GCA000012185_00556_gene;locus_tag=GCA000012185_00556;gene=holB
contig_1	Pyrodigal	CDS	543071	544054	.	-	0	ID=GCA000012185_00556;Name=DNA polymerase III subunit delta';locus_tag=GCA000012185_00556;product=DNA polymerase III subunit delta';Dbxref=GO:0003677,GO:0003887,GO:0006261,GO:0008408,GO:0009360;gene=holB;Parent=GCA000012185_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0470,COG:L,RefSeq:WP_011272062.1,SO:0001217,UniParc:UPI000053E0C8,UniRef:UniRef100_Q4QN90,UniRef:UniRef50_P43748,UniRef:UniRef90_P43748;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	544254	546377	.	+	.	ID=GCA000012185_00557_gene;locus_tag=GCA000012185_00557;gene=lav
contig_1	Pyrodigal	CDS	544254	546377	.	+	0	ID=GCA000012185_00557;Name=phase-variable autotransporter Lav;locus_tag=GCA000012185_00557;product=phase-variable autotransporter Lav;gene=lav;Parent=GCA000012185_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_011272064,COG:COG3468,COG:MU,RefSeq:WP_011272064.1,SO:0001217,UniParc:UPI000053E0CA,UniRef:UniRef100_Q4QN88,UniRef:UniRef50_Q4QN88,UniRef:UniRef90_Q4QN88
contig_1	Pyrodigal	gene	547283	547915	.	-	.	ID=GCA000012185_00558_gene;locus_tag=GCA000012185_00558;gene=tmk
contig_1	Pyrodigal	CDS	547283	547915	.	-	0	ID=GCA000012185_00558;Name=dTMP kinase;locus_tag=GCA000012185_00558;product=dTMP kinase;Dbxref=GO:0004798,GO:0005524,GO:0005737,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=tmk;Parent=GCA000012185_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,RefSeq:WP_038441426.1,SO:0001217,UniParc:UPI00056EE3F4,UniRef:UniRef100_A0A346K928,UniRef:UniRef50_O69169,UniRef:UniRef90_P44719;ec_number=2.7.4.9
contig_1	Pyrodigal	gene	547932	548975	.	-	.	ID=GCA000012185_00559_gene;locus_tag=GCA000012185_00559;gene=mltG
contig_1	Pyrodigal	CDS	547932	548975	.	-	0	ID=GCA000012185_00559;Name=Endolytic murein transglycosylase;locus_tag=GCA000012185_00559;product=Endolytic murein transglycosylase;Dbxref=GO:0005886,GO:0008932,GO:0009252,GO:0071555;gene=mltG;Parent=GCA000012185_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1559,COG:M,KEGG:K07082,RefSeq:WP_011272066.1,SO:0001217,UniParc:UPI000053E0CB,UniRef:UniRef100_A0A2R3FWQ3,UniRef:UniRef50_P44720,UniRef:UniRef90_P44720;ec_number=4.2.2.29
contig_1	Pyrodigal	gene	549045	549980	.	-	.	ID=GCA000012185_00560_gene;locus_tag=GCA000012185_00560;gene=surA
contig_1	Pyrodigal	CDS	549045	549980	.	-	0	ID=GCA000012185_00560;Name=Putative peptidyl-prolyl cis-trans isomerase SurA;locus_tag=GCA000012185_00560;product=Putative peptidyl-prolyl cis-trans isomerase SurA;Dbxref=GO:0042597,GO:0140839,GO:0140840;gene=surA;Parent=GCA000012185_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_038440577.1,SO:0001217,UniParc:UPI00056EA046,UniRef:UniRef100_A0A346K926,UniRef:UniRef50_P44721,UniRef:UniRef90_P44721;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	550056	550595	.	-	.	ID=GCA000012185_00561_gene;locus_tag=GCA000012185_00561;gene=pyrR
contig_1	Pyrodigal	CDS	550056	550595	.	-	0	ID=GCA000012185_00561;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA000012185_00561;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0004845,GO:0006355,GO:0009116;gene=pyrR;Parent=GCA000012185_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2065,COG:F,KEGG:K02825,RefSeq:WP_005626142.1,SO:0001217,UniParc:UPI00003CDBEA,UniRef:UniRef100_Q4QN84,UniRef:UniRef50_P44722,UniRef:UniRef90_P44722;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	550727	551518	.	+	.	ID=GCA000012185_00562_gene;locus_tag=GCA000012185_00562;gene=mazG
contig_1	Pyrodigal	CDS	550727	551518	.	+	0	ID=GCA000012185_00562;Name=nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA000012185_00562;product=nucleoside triphosphate pyrophosphohydrolase;Dbxref=GO:0005524,GO:0006203,GO:0046047,GO:0046052,GO:0046061,GO:0046076,GO:0046081,GO:0046872,GO:0047429,GO:0047693;gene=mazG;Parent=GCA000012185_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3956,COG:R,RefSeq:WP_011272068.1,SO:0001217,UniParc:UPI000053E0CD,UniRef:UniRef100_A0A1Q5Y6C9,UniRef:UniRef50_P44723,UniRef:UniRef90_P44723;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	551568	552443	.	-	.	ID=GCA000012185_00563_gene;locus_tag=GCA000012185_00563;gene=virK
contig_1	Pyrodigal	CDS	551568	552443	.	-	0	ID=GCA000012185_00563;Name=putative protein HI_0461;locus_tag=GCA000012185_00563;product=putative protein HI_0461;Dbxref=GO:0006974;gene=virK;Parent=GCA000012185_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2990,COG:S,KEGG:K09824,RefSeq:WP_011272069.1,SO:0001217,UniParc:UPI000053E0CE,UniRef:UniRef100_A0A2S9RG53,UniRef:UniRef50_Q57144,UniRef:UniRef90_Q57144
contig_1	Pyrodigal	gene	552636	555047	.	+	.	ID=GCA000012185_00564_gene;locus_tag=GCA000012185_00564;gene=lon
contig_1	Pyrodigal	CDS	552636	555047	.	+	0	ID=GCA000012185_00564;Name=endopeptidase La;locus_tag=GCA000012185_00564;product=endopeptidase La;Dbxref=GO:0004176,GO:0004252,GO:0005524,GO:0005737,GO:0006508,GO:0006515,GO:0016887,GO:0034605,GO:0043565;gene=lon;Parent=GCA000012185_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0466,COG:O,KEGG:K01338,RefSeq:WP_011272070.1,SO:0001217,UniParc:UPI000053E0CF,UniRef:UniRef100_Q4QN81,UniRef:UniRef50_P0A9M0,UniRef:UniRef90_P43864;ec_number=3.4.21.53
contig_1	Pyrodigal	gene	555164	556315	.	+	.	ID=GCA000012185_00565_gene;locus_tag=GCA000012185_00565;gene=hemW
contig_1	Pyrodigal	CDS	555164	556315	.	+	0	ID=GCA000012185_00565;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000012185_00565;product=radical SAM family heme chaperone HemW;Dbxref=GO:0004109,GO:0005737,GO:0006779,GO:0046872,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000012185_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,RefSeq:WP_011272071.1,SO:0001217,UniParc:UPI00003CD805,UniRef:UniRef100_A0A2S9S788,UniRef:UniRef50_P43899,UniRef:UniRef90_P43899
contig_1	Pyrodigal	gene	556449	557108	.	+	.	ID=GCA000012185_00566_gene;locus_tag=GCA000012185_00566;gene=rpiA
contig_1	Pyrodigal	CDS	556449	557108	.	+	0	ID=GCA000012185_00566;Name=ribose-5-phosphate isomerase RpiA;locus_tag=GCA000012185_00566;product=ribose-5-phosphate isomerase RpiA;Dbxref=GO:0004751,GO:0005829,GO:0006014,GO:0009052;gene=rpiA;Parent=GCA000012185_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,KEGG:K01807,RefSeq:WP_011272072.1,SO:0001217,UniParc:UPI00003CD804,UniRef:UniRef100_Q4QN79,UniRef:UniRef50_P44725,UniRef:UniRef90_P44725;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	557138	558370	.	+	.	ID=GCA000012185_00567_gene;locus_tag=GCA000012185_00567;gene=serA
contig_1	Pyrodigal	CDS	557138	558370	.	+	0	ID=GCA000012185_00567;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000012185_00567;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0006564,GO:0016616,GO:0051287;gene=serA;Parent=GCA000012185_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,RefSeq:WP_011272073.1,SO:0001217,UniParc:UPI00003CD803,UniRef:UniRef100_Q4QN78,UniRef:UniRef50_P0A9T0,UniRef:UniRef90_P43885;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	558413	559255	.	-	.	ID=GCA000012185_00568_gene;locus_tag=GCA000012185_00568;gene=ygfZ
contig_1	Pyrodigal	CDS	558413	559255	.	-	0	ID=GCA000012185_00568;Name=tRNA-modifying protein YgfZ;locus_tag=GCA000012185_00568;product=tRNA-modifying protein YgfZ;Dbxref=GO:0005542,GO:0009451,GO:0016226;gene=ygfZ;Parent=GCA000012185_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0354,COG:O,KEGG:K06980,RefSeq:WP_011272074.1,SO:0001217,UniParc:UPI00003CD802,UniRef:UniRef100_A0AAJ8WB96,UniRef:UniRef50_P44000,UniRef:UniRef90_P44000
contig_1	Pyrodigal	gene	559265	560128	.	-	.	ID=GCA000012185_00569_gene;locus_tag=GCA000012185_00569;gene=yicC
contig_1	Pyrodigal	CDS	559265	560128	.	-	0	ID=GCA000012185_00569;Name=putative endoribonuclease YicC;locus_tag=GCA000012185_00569;product=putative endoribonuclease YicC;Dbxref=GO:0004521;gene=yicC;Parent=GCA000012185_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1561,COG:J,RefSeq:WP_011272075.1,SO:0001217,UniParc:UPI00003CD801,UniRef:UniRef100_A0AAJ8WB91,UniRef:UniRef50_P44726,UniRef:UniRef90_P44726;ec_number=3.1.26.-
contig_1	Infernal	regulatory_region	560410	560547	3.1e-10	+	.	ID=JPLKGDNPJF_105;Name=Histidine operon leader;product=Histidine operon leader;Dbxref=RFAM:RF00514;inference=profile:Rfam:RF00514;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	560577	561488	.	+	.	ID=GCA000012185_00570_gene;locus_tag=GCA000012185_00570;gene=hisG
contig_1	Pyrodigal	CDS	560577	561488	.	+	0	ID=GCA000012185_00570;Name=ATP phosphoribosyltransferase;locus_tag=GCA000012185_00570;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0000287,GO:0003879,GO:0005524,GO:0005737;gene=hisG;Parent=GCA000012185_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0040,COG:E,KEGG:K00765,RefSeq:WP_005656529.1,SO:0001217,UniParc:UPI000012C743,UniRef:UniRef100_P43853,UniRef:UniRef50_P60757,UniRef:UniRef90_P43853;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	561581	562864	.	+	.	ID=GCA000012185_00571_gene;locus_tag=GCA000012185_00571;gene=hisD
contig_1	Pyrodigal	CDS	561581	562864	.	+	0	ID=GCA000012185_00571;Name=Histidinol dehydrogenase;locus_tag=GCA000012185_00571;product=Histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005737,GO:0005829,GO:0008270,GO:0051287;gene=hisD;Parent=GCA000012185_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0141,COG:E,KEGG:K00013,RefSeq:WP_011272076.1,SO:0001217,UniParc:UPI00003CD834,UniRef:UniRef100_Q4QN74,UniRef:UniRef50_Q492K3,UniRef:UniRef90_P44001;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	562978	564036	.	+	.	ID=GCA000012185_00572_gene;locus_tag=GCA000012185_00572;gene=hisC
contig_1	Pyrodigal	CDS	562978	564036	.	+	0	ID=GCA000012185_00572;Name=histidinol-phosphate transaminase;locus_tag=GCA000012185_00572;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000012185_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_041174737.1,SO:0001217,UniParc:UPI00003CD833,UniRef:UniRef100_Q4QN73,UniRef:UniRef50_Q8ZFX6,UniRef:UniRef90_Q4QN73;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	564148	565236	.	+	.	ID=GCA000012185_00573_gene;locus_tag=GCA000012185_00573;gene=hisB
contig_1	Pyrodigal	CDS	564148	565236	.	+	0	ID=GCA000012185_00573;Name=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000012185_00573;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004401,GO:0004424,GO:0005737,GO:0046872;gene=hisB;Parent=GCA000012185_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0241,COG:E,KEGG:K01089,RefSeq:WP_011272078.1,SO:0001217,UniParc:UPI00003CD832,UniRef:UniRef100_Q4QN72,UniRef:UniRef50_P44327,UniRef:UniRef90_P44327;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	565302	565901	.	+	.	ID=GCA000012185_00574_gene;locus_tag=GCA000012185_00574;gene=hisH
contig_1	Pyrodigal	CDS	565302	565901	.	+	0	ID=GCA000012185_00574;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000012185_00574;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0016829;gene=hisH;Parent=GCA000012185_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0118,COG:E,RefSeq:WP_005649382.1,SO:0001217,UniParc:UPI000039A5B5,UniRef:UniRef100_Q4QN71,UniRef:UniRef50_P44340,UniRef:UniRef90_P44340;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	565937	566686	.	+	.	ID=GCA000012185_00575_gene;locus_tag=GCA000012185_00575;gene=hisA
contig_1	Pyrodigal	CDS	565937	566686	.	+	0	ID=GCA000012185_00575;Name=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;locus_tag=GCA000012185_00575;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0005737;gene=hisA;Parent=GCA000012185_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,RefSeq:WP_005649383.1,SO:0001217,UniParc:UPI000012C7C4,UniRef:UniRef100_P44435,UniRef:UniRef50_P62355,UniRef:UniRef90_P44435;ec_number=5.3.1.16
contig_1	Pyrodigal	gene	566668	567444	.	+	.	ID=GCA000012185_00576_gene;locus_tag=GCA000012185_00576;gene=hisF
contig_1	Pyrodigal	CDS	566668	567444	.	+	0	ID=GCA000012185_00576;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000012185_00576;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000012185_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0107,COG:E,RefSeq:WP_005693688.1,SO:0001217,UniParc:UPI000012C821,UniRef:UniRef100_P44436,UniRef:UniRef50_Q9PM72,UniRef:UniRef90_P44436;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	567444	568109	.	+	.	ID=GCA000012185_00577_gene;locus_tag=GCA000012185_00577;gene=hisIE
contig_1	Pyrodigal	CDS	567444	568109	.	+	0	ID=GCA000012185_00577;Name=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;locus_tag=GCA000012185_00577;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;Dbxref=GO:0000105,GO:0004635,GO:0004636,GO:0005524,GO:0005737;gene=hisIE;Parent=GCA000012185_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0140,COG:E,RefSeq:WP_005649391.1,SO:0001217,UniParc:UPI000012C774,UniRef:UniRef100_P44434,UniRef:UniRef50_P37793,UniRef:UniRef90_P44434;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	568373	569575	.	+	.	ID=GCA000012185_00578_gene;locus_tag=GCA000012185_00578;gene=tyrP-A
contig_1	Pyrodigal	CDS	568373	569575	.	+	0	ID=GCA000012185_00578;Name=Tyrosine-specific transport system 1;locus_tag=GCA000012185_00578;product=Tyrosine-specific transport system 1;Dbxref=GO:0003333,GO:0005886,GO:0015173,GO:0015293;gene=tyrP-A;Parent=GCA000012185_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_011272079.1,SO:0001217,UniParc:UPI000053E0D1,UniRef:UniRef100_A0A1Q5Y6A7,UniRef:UniRef50_P44747,UniRef:UniRef90_P44727
contig_1	Pyrodigal	gene	569761	570189	.	-	.	ID=GCA000012185_00579_gene;locus_tag=GCA000012185_00579;gene=atpC
contig_1	Pyrodigal	CDS	569761	570189	.	-	0	ID=GCA000012185_00579;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000012185_00579;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000012185_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_005649396.1,SO:0001217,UniParc:UPI00001264E8,UniRef:UniRef100_P43718,UniRef:UniRef50_P43718,UniRef:UniRef90_P43718;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	570219	571592	.	-	.	ID=GCA000012185_00580_gene;locus_tag=GCA000012185_00580;gene=atpD
contig_1	Pyrodigal	CDS	570219	571592	.	-	0	ID=GCA000012185_00580;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000012185_00580;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000012185_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_005649402.1,SO:0001217,UniParc:UPI0000126448,UniRef:UniRef100_P43715,UniRef:UniRef50_Q07232,UniRef:UniRef90_P43715;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	571609	572478	.	-	.	ID=GCA000012185_00581_gene;locus_tag=GCA000012185_00581;gene=atpG
contig_1	Pyrodigal	CDS	571609	572478	.	-	0	ID=GCA000012185_00581;Name=F0F1 ATP synthase subunit gamma;locus_tag=GCA000012185_00581;product=F0F1 ATP synthase subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000012185_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,RefSeq:WP_011272080.1,SO:0001217,UniParc:UPI00003CD8A5,UniRef:UniRef100_Q4QN63,UniRef:UniRef50_P43716,UniRef:UniRef90_P43716;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	572494	574035	.	-	.	ID=GCA000012185_00582_gene;locus_tag=GCA000012185_00582;gene=atpA
contig_1	Pyrodigal	CDS	572494	574035	.	-	0	ID=GCA000012185_00582;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000012185_00582;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000012185_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_011272081.1,SO:0001217,UniParc:UPI00003CD8A4,UniRef:UniRef100_Q4QN62,UniRef:UniRef50_Q9KNH3,UniRef:UniRef90_P43714;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	574048	574581	.	-	.	ID=GCA000012185_00583_gene;locus_tag=GCA000012185_00583;gene=atpH
contig_1	Pyrodigal	CDS	574048	574581	.	-	0	ID=GCA000012185_00583;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA000012185_00583;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0005886,GO:0015986,GO:0016020,GO:0045261,GO:0046933;gene=atpH;Parent=GCA000012185_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_005642563.1,SO:0001217,UniParc:UPI00001264A5,UniRef:UniRef100_P43717,UniRef:UniRef50_Q7CFM5,UniRef:UniRef90_P43717;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	574594	575064	.	-	.	ID=GCA000012185_00584_gene;locus_tag=GCA000012185_00584;gene=atpF
contig_1	Pyrodigal	CDS	574594	575064	.	-	0	ID=GCA000012185_00584;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000012185_00584;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpF;Parent=GCA000012185_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_005629246.1,SO:0001217,UniParc:UPI000012653F,UniRef:UniRef100_P43720,UniRef:UniRef50_A0KQY2,UniRef:UniRef90_A5UGZ3;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	575114	575368	.	-	.	ID=GCA000012185_00585_gene;locus_tag=GCA000012185_00585;gene=atpE
contig_1	Pyrodigal	CDS	575114	575368	.	-	0	ID=GCA000012185_00585;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000012185_00585;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000012185_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_005652035.1,SO:0001217,UniParc:UPI00001265CB,UniRef:UniRef100_P43721,UniRef:UniRef50_P43721,UniRef:UniRef90_P43721;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	575424	576212	.	-	.	ID=GCA000012185_00586_gene;locus_tag=GCA000012185_00586;gene=atpB
contig_1	Pyrodigal	CDS	575424	576212	.	-	0	ID=GCA000012185_00586;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000012185_00586;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000012185_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_005629251.1,SO:0001217,UniParc:UPI0000126309,UniRef:UniRef100_P43719,UniRef:UniRef50_P43719,UniRef:UniRef90_P43719;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	576249	576623	.	-	.	ID=GCA000012185_00587_gene;locus_tag=GCA000012185_00587;gene=atpI
contig_1	Pyrodigal	CDS	576249	576623	.	-	0	ID=GCA000012185_00587;Name=putative protein HI_0485-1;locus_tag=GCA000012185_00587;product=putative protein HI_0485-1;Dbxref=GO:0005886;gene=atpI;Parent=GCA000012185_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3312,RefSeq:WP_011272082.1,SO:0001217,UniParc:UPI00003CDB8C,UniRef:UniRef100_A0A2R3G0V7,UniRef:UniRef50_O86225,UniRef:UniRef90_O86225
contig_1	Pyrodigal	gene	576749	577360	.	-	.	ID=GCA000012185_00588_gene;locus_tag=GCA000012185_00588;gene=rsmG
contig_1	Pyrodigal	CDS	576749	577360	.	-	0	ID=GCA000012185_00588;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000012185_00588;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000012185_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0357,COG:J,RefSeq:WP_005652031.1,SO:0001217,UniParc:UPI000012B46B,UniRef:UniRef100_P44728,UniRef:UniRef50_Q07VT4,UniRef:UniRef90_P44728;ec_number=2.1.1.170
contig_1	Pyrodigal	gene	577500	577877	.	-	.	ID=GCA000012185_00589_gene;locus_tag=GCA000012185_00589
contig_1	Pyrodigal	CDS	577500	577877	.	-	0	ID=GCA000012185_00589;Name=putative protein HI_0487;locus_tag=GCA000012185_00589;product=putative protein HI_0487;Dbxref=GO:0006355;Parent=GCA000012185_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272083.1,SO:0001217,UniParc:UPI000053E0D2,UniRef:UniRef100_A0A2R3FWT1,UniRef:UniRef50_P44003,UniRef:UniRef90_P44003
contig_1	Pyrodigal	gene	577993	578595	.	+	.	ID=GCA000012185_00590_gene;locus_tag=GCA000012185_00590;gene=ycjU
contig_1	Pyrodigal	CDS	577993	578595	.	+	0	ID=GCA000012185_00590;Name=putative protein HI_0488;locus_tag=GCA000012185_00590;product=putative protein HI_0488;Dbxref=GO:0005975,GO:0008801,GO:0050308;gene=ycjU;Parent=GCA000012185_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_005652027.1,SO:0001217,UniParc:UPI000013BECF,UniRef:UniRef100_P44004,UniRef:UniRef50_P44004,UniRef:UniRef90_P44004
contig_1	Pyrodigal	gene	578595	579068	.	+	.	ID=GCA000012185_00591_gene;locus_tag=GCA000012185_00591;gene=ygaA
contig_1	Pyrodigal	CDS	578595	579068	.	+	0	ID=GCA000012185_00591;Name=putative protein HI_0489;locus_tag=GCA000012185_00591;product=putative protein HI_0489;Dbxref=GO:0005886;gene=ygaA;Parent=GCA000012185_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1238,COG:S,RefSeq:WP_011272084.1,SO:0001217,UniParc:UPI00003CDB26,UniRef:UniRef100_A0A2R3FVP3,UniRef:UniRef50_P44005,UniRef:UniRef90_P44005
contig_1	Infernal	gene	579067	579148	.	-	.	ID=GCA000012185_00592_gene;locus_tag=GCA000012185_00592;gene=JA04
contig_1	Infernal	ncRNA	579067	579148	1.7e-16	-	.	ID=GCA000012185_00592;Name=Aggregatibacter sRNA JA04;locus_tag=GCA000012185_00592;product=Aggregatibacter sRNA JA04;Dbxref=RFAM:RF02732;Parent=GCA000012185_00592_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02732
contig_1	Pyrodigal	gene	579253	579756	.	+	.	ID=GCA000012185_00593_gene;locus_tag=GCA000012185_00593;gene=luxS
contig_1	Pyrodigal	CDS	579253	579756	.	+	0	ID=GCA000012185_00593;Name=S-ribosylhomocysteine lyase;locus_tag=GCA000012185_00593;product=S-ribosylhomocysteine lyase;Dbxref=GO:0005506,GO:0009372,GO:0043768;gene=luxS;Parent=GCA000012185_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,RefSeq:WP_011272085.1,SO:0001217,UniParc:UPI00003CDB25,UniRef:UniRef100_Q4QN52,UniRef:UniRef50_P45578,UniRef:UniRef90_P44007;ec_number=4.4.1.21
contig_1	Pyrodigal	gene	580700	581407	.	-	.	ID=GCA000012185_00594_gene;locus_tag=GCA000012185_00594;gene=aphA
contig_1	Pyrodigal	CDS	580700	581407	.	-	0	ID=GCA000012185_00594;Name=acid phosphatase AphA;locus_tag=GCA000012185_00594;product=acid phosphatase AphA;Dbxref=GO:0003993,GO:0030288,GO:0046872;gene=aphA;Parent=GCA000012185_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3700,COG:PR,RefSeq:WP_005652021.1,SO:0001217,UniParc:UPI000053E0D3,UniRef:UniRef100_A0A2R3G1N9,UniRef:UniRef50_P44009,UniRef:UniRef90_P44009;ec_number=3.1.3.2
contig_1	Pyrodigal	gene	581627	582154	.	+	.	ID=GCA000012185_00595_gene;locus_tag=GCA000012185_00595;gene=hslV
contig_1	Pyrodigal	CDS	581627	582154	.	+	0	ID=GCA000012185_00595;Name=ATP-dependent protease subunit HslV;locus_tag=GCA000012185_00595;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA000012185_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,KEGG:K01419,RefSeq:WP_011272086.1,SO:0001217,UniParc:UPI000053E0D4,UniRef:UniRef100_Q4QN50,UniRef:UniRef50_P43772,UniRef:UniRef90_P43772;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	582165	583499	.	+	.	ID=GCA000012185_00596_gene;locus_tag=GCA000012185_00596;gene=hslU
contig_1	Pyrodigal	CDS	582165	583499	.	+	0	ID=GCA000012185_00596;Name=HslU--HslV peptidase ATPase subunit;locus_tag=GCA000012185_00596;product=HslU--HslV peptidase ATPase subunit;Dbxref=GO:0004176,GO:0005524,GO:0006508,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603;gene=hslU;Parent=GCA000012185_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_005666443.1,SO:0001217,UniParc:UPI000039AEBA,UniRef:UniRef100_Q4QN49,UniRef:UniRef50_P43773,UniRef:UniRef90_P43773;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	583569	584621	.	-	.	ID=GCA000012185_00597_gene;locus_tag=GCA000012185_00597;gene=potD-A
contig_1	Pyrodigal	CDS	583569	584621	.	-	0	ID=GCA000012185_00597;Name=Spermidine/putrescine-binding periplasmic protein 2;locus_tag=GCA000012185_00597;product=Spermidine/putrescine-binding periplasmic protein 2;Dbxref=GO:0015846,GO:0019808,GO:0042597;gene=potD-A;Parent=GCA000012185_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_005691316.1,SO:0001217,UniParc:UPI000053E0D5,UniRef:UniRef100_A0A2R3G0W7,UniRef:UniRef50_P44731,UniRef:UniRef90_P44731
contig_1	Pyrodigal	gene	584761	586056	.	+	.	ID=GCA000012185_00598_gene;locus_tag=GCA000012185_00598;gene=ordL
contig_1	Pyrodigal	CDS	584761	586056	.	+	0	ID=GCA000012185_00598;Name=putative oxidoreductase OrdL;locus_tag=GCA000012185_00598;product=putative oxidoreductase OrdL;Dbxref=GO:0005737,GO:0016491;gene=ordL;Parent=GCA000012185_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0665,COG:E,RefSeq:WP_011272087.1,SO:0001217,UniParc:UPI00003CDA19,UniRef:UniRef100_A0A2S9S7B3,UniRef:UniRef50_P44732,UniRef:UniRef90_P44732;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	586220	587662	.	+	.	ID=GCA000012185_00599_gene;locus_tag=GCA000012185_00599;gene=rmuC
contig_1	Pyrodigal	CDS	586220	587662	.	+	0	ID=GCA000012185_00599;Name=DNA recombination RmuC-like protein;locus_tag=GCA000012185_00599;product=DNA recombination RmuC-like protein;Dbxref=GO:0006310;gene=rmuC;Parent=GCA000012185_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1322,COG:L,KEGG:K09760,RefSeq:WP_011272088.1,SO:0001217,UniParc:UPI000053E0D6,UniRef:UniRef100_Q4QN46,UniRef:UniRef50_P44733,UniRef:UniRef90_P44733
contig_1	Pyrodigal	gene	587826	588245	.	+	.	ID=GCA000012185_00600_gene;locus_tag=GCA000012185_00600;gene=rbsD
contig_1	Pyrodigal	CDS	587826	588245	.	+	0	ID=GCA000012185_00600;Name=D-ribose pyranase;locus_tag=GCA000012185_00600;product=D-ribose pyranase;Dbxref=GO:0005829,GO:0016866,GO:0016872,GO:0019303,GO:0048029,GO:0062193;gene=rbsD;Parent=GCA000012185_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1869,COG:G,KEGG:K06726,RefSeq:WP_005664526.1,SO:0001217,UniParc:UPI000039A5C8,UniRef:UniRef100_Q4QN45,UniRef:UniRef50_P04982,UniRef:UniRef90_P44734;ec_number=5.4.99.62
contig_1	Pyrodigal	gene	588259	589740	.	+	.	ID=GCA000012185_00601_gene;locus_tag=GCA000012185_00601;gene=rbsA
contig_1	Pyrodigal	CDS	588259	589740	.	+	0	ID=GCA000012185_00601;Name=ribose ABC transporter ATP-binding protein RbsA;locus_tag=GCA000012185_00601;product=ribose ABC transporter ATP-binding protein RbsA;Dbxref=GO:0005524,GO:0005886,GO:0015611,GO:0016887;gene=rbsA;Parent=GCA000012185_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,RefSeq:WP_011272089.1,SO:0001217,UniParc:UPI000053E0D7,UniRef:UniRef100_Q4QN44,UniRef:UniRef50_P44735,UniRef:UniRef90_P44735;ec_number=7.5.2.7
contig_1	Pyrodigal	gene	589795	590724	.	+	.	ID=GCA000012185_00602_gene;locus_tag=GCA000012185_00602;gene=rbsC
contig_1	Pyrodigal	CDS	589795	590724	.	+	0	ID=GCA000012185_00602;Name=ribose ABC transporter permease;locus_tag=GCA000012185_00602;product=ribose ABC transporter permease;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0055085;gene=rbsC;Parent=GCA000012185_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,SO:0001217,UniRef:UniRef50_P0AGI1,UniRef:UniRef90_P44736
contig_1	Pyrodigal	gene	590744	591622	.	+	.	ID=GCA000012185_00603_gene;locus_tag=GCA000012185_00603;gene=rbsB
contig_1	Pyrodigal	CDS	590744	591622	.	+	0	ID=GCA000012185_00603;Name=ribose ABC transporter substrate-binding protein RbsB;locus_tag=GCA000012185_00603;product=ribose ABC transporter substrate-binding protein RbsB;Dbxref=GO:0030246,GO:0042597;gene=rbsB;Parent=GCA000012185_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005639843.1,SO:0001217,UniParc:UPI000053E0D8,UniRef:UniRef100_A0A0D0IDB4,UniRef:UniRef50_P44737,UniRef:UniRef90_P44737
contig_1	Pyrodigal	gene	591720	592640	.	+	.	ID=GCA000012185_00604_gene;locus_tag=GCA000012185_00604;gene=rbsK
contig_1	Pyrodigal	CDS	591720	592640	.	+	0	ID=GCA000012185_00604;Name=ribokinase;locus_tag=GCA000012185_00604;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0019303,GO:0046872;gene=rbsK;Parent=GCA000012185_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_011272090.1,SO:0001217,UniParc:UPI00003CDB7B,UniRef:UniRef100_A0AAJ8WR78,UniRef:UniRef50_P0A9J6,UniRef:UniRef90_P44331;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	592668	593666	.	+	.	ID=GCA000012185_00605_gene;locus_tag=GCA000012185_00605;gene=rbsR
contig_1	Pyrodigal	CDS	592668	593666	.	+	0	ID=GCA000012185_00605;Name=Ribose operon repressor;locus_tag=GCA000012185_00605;product=Ribose operon repressor;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=rbsR;Parent=GCA000012185_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_005659739.1,SO:0001217,UniParc:UPI000053E0D9,UniRef:UniRef100_A0A2S9S7C6,UniRef:UniRef50_P44329,UniRef:UniRef90_P44329
contig_1	Pyrodigal	gene	593772	594323	.	+	.	ID=GCA000012185_00606_gene;locus_tag=GCA000012185_00606;gene=yqhA
contig_1	Pyrodigal	CDS	593772	594323	.	+	0	ID=GCA000012185_00606;Name=UPF0114 protein NTHI0635;locus_tag=GCA000012185_00606;product=UPF0114 protein NTHI0635;Dbxref=GO:0005886;gene=yqhA;Parent=GCA000012185_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2862,COG:S,RefSeq:WP_005649445.1,SO:0001217,UniParc:UPI000013BF0B,UniRef:UniRef100_P44010,UniRef:UniRef50_P57929,UniRef:UniRef90_P44010
contig_1	Pyrodigal	gene	594463	594951	.	-	.	ID=GCA000012185_00607_gene;locus_tag=GCA000012185_00607;gene=rraA
contig_1	Pyrodigal	CDS	594463	594951	.	-	0	ID=GCA000012185_00607;Name=ribonuclease E activity regulator RraA;locus_tag=GCA000012185_00607;product=ribonuclease E activity regulator RraA;Dbxref=GO:0005737,GO:0008428,GO:0019899,GO:0051252,GO:0060698;gene=rraA;Parent=GCA000012185_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0684,COG:J,KEGG:K02553,RefSeq:WP_005649446.1,SO:0001217,UniParc:UPI000039A5CE,UniRef:UniRef100_Q4QN38,UniRef:UniRef50_Q65RG4,UniRef:UniRef90_P44738
contig_1	Pyrodigal	gene	595003	595920	.	-	.	ID=GCA000012185_00608_gene;locus_tag=GCA000012185_00608;gene=menA
contig_1	Pyrodigal	CDS	595003	595920	.	-	0	ID=GCA000012185_00608;Name=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;locus_tag=GCA000012185_00608;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;Dbxref=GO:0004659,GO:0005886,GO:0009234,GO:0032194,GO:0042371,GO:0046428;gene=menA;Parent=GCA000012185_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,RefSeq:WP_032827535.1,SO:0001217,UniParc:UPI0005190233,UniRef:UniRef100_Q4QN37,UniRef:UniRef50_P32166,UniRef:UniRef90_P44739;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	595982	596701	.	+	.	ID=GCA000012185_00609_gene;locus_tag=GCA000012185_00609;gene=tsaA
contig_1	Pyrodigal	CDS	595982	596701	.	+	0	ID=GCA000012185_00609;Name=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;locus_tag=GCA000012185_00609;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;Dbxref=GO:0000049,GO:0005737,GO:0006400,GO:0008757,GO:0030488,GO:0089715;gene=tsaA;Parent=GCA000012185_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1720,COG:J,RefSeq:WP_011272092.1,SO:0001217,UniParc:UPI000053E0DB,UniRef:UniRef100_A0A3E1QR44,UniRef:UniRef50_P44740,UniRef:UniRef90_P44740;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	596754	597698	.	-	.	ID=GCA000012185_00610_gene;locus_tag=GCA000012185_00610;gene=tehA
contig_1	Pyrodigal	CDS	596754	597698	.	-	0	ID=GCA000012185_00610;Name=dicarboxylate transporter/tellurite-resistance protein TehA;locus_tag=GCA000012185_00610;product=dicarboxylate transporter/tellurite-resistance protein TehA;Dbxref=GO:0005886,GO:0016020,GO:0042802,GO:0046583,GO:0046677,GO:0046690,GO:0055085;gene=tehA;Parent=GCA000012185_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1275,COG:V,RefSeq:WP_005659732.1,SO:0001217,UniParc:UPI00014FC582,UniRef:UniRef100_A0A346JTT1,UniRef:UniRef50_P44741,UniRef:UniRef90_P44741
contig_1	Pyrodigal	gene	597892	602142	.	-	.	ID=GCA000012185_00611_gene;locus_tag=GCA000012185_00611;gene=rpoC
contig_1	Pyrodigal	CDS	597892	602142	.	-	0	ID=GCA000012185_00611;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000012185_00611;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000012185_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,RefSeq:WP_005659731.1,SO:0001217,UniParc:UPI000053E0DC,UniRef:UniRef100_Q4QN34,UniRef:UniRef50_Q65W40,UniRef:UniRef90_Q65W40;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	602349	606380	.	-	.	ID=GCA000012185_00612_gene;locus_tag=GCA000012185_00612;gene=rpoB
contig_1	Pyrodigal	CDS	602349	606380	.	-	0	ID=GCA000012185_00612;Name=DNA-directed RNA polymerase subunit beta;locus_tag=GCA000012185_00612;product=DNA-directed RNA polymerase subunit beta;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA000012185_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_011272094.1,SO:0001217,UniParc:UPI000053E0DD,UniRef:UniRef100_Q4QN33,UniRef:UniRef50_A5UH20,UniRef:UniRef90_A5UH20;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	606764	607453	.	-	.	ID=GCA000012185_00613_gene;locus_tag=GCA000012185_00613;gene=rplA
contig_1	Pyrodigal	CDS	606764	607453	.	-	0	ID=GCA000012185_00613;Name=50S ribosomal protein L1;locus_tag=GCA000012185_00613;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843,GO:0022625;gene=rplA;Parent=GCA000012185_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_005649467.1,SO:0001217,UniParc:UPI00001685AA,UniRef:UniRef100_P44342,UniRef:UniRef50_P10054,UniRef:UniRef90_P44342
contig_1	Pyrodigal	gene	607458	607886	.	-	.	ID=GCA000012185_00614_gene;locus_tag=GCA000012185_00614;gene=rplK
contig_1	Pyrodigal	CDS	607458	607886	.	-	0	ID=GCA000012185_00614;Name=50S ribosomal protein L11;locus_tag=GCA000012185_00614;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000012185_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_005630840.1,SO:0001217,UniParc:UPI00001685AB,UniRef:UniRef100_P44351,UniRef:UniRef50_P62441,UniRef:UniRef90_P44351
contig_1	Pyrodigal	gene	608059	608775	.	-	.	ID=GCA000012185_00615_gene;locus_tag=GCA000012185_00615;gene=deoD
contig_1	Pyrodigal	CDS	608059	608775	.	-	0	ID=GCA000012185_00615;Name=purine-nucleoside phosphorylase;locus_tag=GCA000012185_00615;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0005829,GO:0006139,GO:0006152;gene=deoD;Parent=GCA000012185_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_005694122.1,SO:0001217,UniParc:UPI00001291BF,UniRef:UniRef100_P44417,UniRef:UniRef50_O34925,UniRef:UniRef90_P44417;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	608859	610112	.	-	.	ID=GCA000012185_00616_gene;locus_tag=GCA000012185_00616;gene=nupC
contig_1	Pyrodigal	CDS	608859	610112	.	-	0	ID=GCA000012185_00616;Name=putative transporter HI_0519;locus_tag=GCA000012185_00616;product=putative transporter HI_0519;Dbxref=GO:0005337,GO:0005886,GO:0015293,GO:1901642;gene=nupC;Parent=GCA000012185_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,RefSeq:WP_005649475.1,SO:0001217,UniParc:UPI000013AC69,UniRef:UniRef100_P44742,UniRef:UniRef50_O25792,UniRef:UniRef90_P44742
contig_1	Pyrodigal	gene	610211	610999	.	-	.	ID=GCA000012185_00617_gene;locus_tag=GCA000012185_00617;gene=pflA
contig_1	Pyrodigal	CDS	610211	610999	.	-	0	ID=GCA000012185_00617;Name=Putative glycyl-radical enzyme activating enzyme HI_0520;locus_tag=GCA000012185_00617;product=Putative glycyl-radical enzyme activating enzyme HI_0520;Dbxref=GO:0016491,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000012185_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_011272095.1,SO:0001217,UniParc:UPI00003CDADB,UniRef:UniRef100_Q4QN28,UniRef:UniRef50_P44743,UniRef:UniRef90_P44743;ec_number=1.97.1.-
contig_1	Pyrodigal	gene	611008	612552	.	-	.	ID=GCA000012185_00618_gene;locus_tag=GCA000012185_00618
contig_1	Pyrodigal	CDS	611008	612552	.	-	0	ID=GCA000012185_00618;Name=putative protein HI_0521;locus_tag=GCA000012185_00618;product=putative protein HI_0521;Parent=GCA000012185_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272096.1,SO:0001217,UniParc:UPI00003CDADC,UniRef:UniRef100_A0A3E1QI68,UniRef:UniRef50_P44744,UniRef:UniRef90_P44744
contig_1	Pyrodigal	gene	612765	613421	.	+	.	ID=GCA000012185_00619_gene;locus_tag=GCA000012185_00619;gene=yczE
contig_1	Pyrodigal	CDS	612765	613421	.	+	0	ID=GCA000012185_00619;Name=putative protein HI_0522;locus_tag=GCA000012185_00619;product=putative protein HI_0522;Dbxref=GO:0005886;gene=yczE;Parent=GCA000012185_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2364,COG:S,KEGG:K07149,RefSeq:WP_011272097.1,SO:0001217,UniParc:UPI000053E0DE,UniRef:UniRef100_A0A2S9S7E3,UniRef:UniRef50_Q57256,UniRef:UniRef90_Q57256
contig_1	Pyrodigal	gene	613377	614417	.	-	.	ID=GCA000012185_00620_gene;locus_tag=GCA000012185_00620;gene=waaQ
contig_1	Pyrodigal	CDS	613377	614417	.	-	0	ID=GCA000012185_00620;Name=heptosyltransferase-like protein;locus_tag=GCA000012185_00620;product=heptosyltransferase-like protein;Dbxref=GO:0005829,GO:0008713,GO:0009244;gene=waaQ;Parent=GCA000012185_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_038440548.1,SO:0001217,UniParc:UPI00003CDAD7,UniRef:UniRef100_Q4QN25,UniRef:UniRef50_P44011,UniRef:UniRef90_P44011,VFDB:VFC0258,VFDB:VFG013299;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	614485	615564	.	-	.	ID=GCA000012185_00621_gene;locus_tag=GCA000012185_00621;gene=fbaA
contig_1	Pyrodigal	CDS	614485	615564	.	-	0	ID=GCA000012185_00621;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000012185_00621;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0005829,GO:0005975,GO:0006094,GO:0006096,GO:0008270;gene=fbaA;Parent=GCA000012185_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_005664488.1,SO:0001217,UniParc:UPI00003CDAD6,UniRef:UniRef100_A0A0D0IFP7,UniRef:UniRef50_P14540,UniRef:UniRef90_P44429;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	615675	616835	.	-	.	ID=GCA000012185_00622_gene;locus_tag=GCA000012185_00622;gene=pgk
contig_1	Pyrodigal	CDS	615675	616835	.	-	0	ID=GCA000012185_00622;Name=phosphoglycerate kinase;locus_tag=GCA000012185_00622;product=phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA000012185_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000111274,COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_011272099.1,SO:0001217,UniParc:UPI000053E0E0,UniRef:UniRef100_Q4QN23,UniRef:UniRef50_P0A799,UniRef:UniRef90_P43726;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	616931	617725	.	-	.	ID=GCA000012185_00623_gene;locus_tag=GCA000012185_00623;gene=rnaI
contig_1	Pyrodigal	CDS	616931	617725	.	-	0	ID=GCA000012185_00623;Name=putative ribonuclease HI_0526;locus_tag=GCA000012185_00623;product=putative ribonuclease HI_0526;Dbxref=GO:0003723,GO:0006401,GO:0033897;gene=rnaI;Parent=GCA000012185_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3719,COG:J,KEGG:K01166,RefSeq:WP_006995195.1,SO:0001217,UniParc:UPI000053E0E1,UniRef:UniRef100_A0A2S9S7G3,UniRef:UniRef50_P44012,UniRef:UniRef90_P44012;ec_number=4.6.1.19
contig_1	Pyrodigal	gene	617803	618063	.	+	.	ID=GCA000012185_00624_gene;locus_tag=GCA000012185_00624;gene=yfhL
contig_1	Pyrodigal	CDS	617803	618063	.	+	0	ID=GCA000012185_00624;Name=YfhL family 4Fe-4S dicluster ferredoxin;locus_tag=GCA000012185_00624;product=YfhL family 4Fe-4S dicluster ferredoxin;Dbxref=GO:0005737,GO:0046872,GO:0051539;gene=yfhL;Parent=GCA000012185_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651954.1,SO:0001217,UniParc:UPI00003CD783,UniRef:UniRef100_A0A2S9SB10,UniRef:UniRef50_P44746,UniRef:UniRef90_P44746
contig_1	Pyrodigal	gene	618197	619417	.	-	.	ID=GCA000012185_00625_gene;locus_tag=GCA000012185_00625;gene=tyrP-B
contig_1	Pyrodigal	CDS	618197	619417	.	-	0	ID=GCA000012185_00625;Name=Tyrosine-specific transport system 2;locus_tag=GCA000012185_00625;product=Tyrosine-specific transport system 2;Dbxref=GO:0003333,GO:0005886,GO:0015173,GO:0015293;gene=tyrP-B;Parent=GCA000012185_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_011272100.1,SO:0001217,UniParc:UPI00003CD782,UniRef:UniRef100_A0AAJ8WB62,UniRef:UniRef50_P44747,UniRef:UniRef90_P44747
contig_1	Pyrodigal	gene	619454	620035	.	-	.	ID=GCA000012185_00626_gene;locus_tag=GCA000012185_00626;gene=tdk
contig_1	Pyrodigal	CDS	619454	620035	.	-	0	ID=GCA000012185_00626;Name=thymidine kinase;locus_tag=GCA000012185_00626;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897;gene=tdk;Parent=GCA000012185_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,RefSeq:WP_005651950.1,SO:0001217,UniParc:UPI000053E0E2,UniRef:UniRef100_Q4QN19,UniRef:UniRef50_Q8ZEJ1,UniRef:UniRef90_P44309;ec_number=2.7.1.21
contig_1	Pyrodigal	gene	620044	621072	.	-	.	ID=GCA000012185_00627_gene;locus_tag=GCA000012185_00627;gene=tsaD
contig_1	Pyrodigal	CDS	620044	621072	.	-	0	ID=GCA000012185_00627;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000012185_00627;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000012185_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_005651947.1,SO:0001217,UniParc:UPI00003CD780,UniRef:UniRef100_A0A2S9S7D9,UniRef:UniRef50_P43764,UniRef:UniRef90_P43764;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	621304	621519	.	+	.	ID=GCA000012185_00628_gene;locus_tag=GCA000012185_00628;gene=rpsU
contig_1	Pyrodigal	CDS	621304	621519	.	+	0	ID=GCA000012185_00628;Name=30S ribosomal protein S21;locus_tag=GCA000012185_00628;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA000012185_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_005627632.1,SO:0001217,UniParc:UPI00001685AD,UniRef:UniRef100_P44386,UniRef:UniRef50_P44386,UniRef:UniRef90_P44386
contig_1	Pyrodigal	gene	621653	623434	.	+	.	ID=GCA000012185_00629_gene;locus_tag=GCA000012185_00629;gene=dnaG
contig_1	Pyrodigal	CDS	621653	623434	.	+	0	ID=GCA000012185_00629;Name=DNA primase;locus_tag=GCA000012185_00629;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003896,GO:0005737,GO:0006269,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000012185_00629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_005660997.1,SO:0001217,UniParc:UPI000053E0E3,UniRef:UniRef100_A0A121XQH5,UniRef:UniRef50_Q08346,UniRef:UniRef90_Q08346;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	623505	625376	.	+	.	ID=GCA000012185_00630_gene;locus_tag=GCA000012185_00630;gene=rpoD
contig_1	Pyrodigal	CDS	623505	625376	.	+	0	ID=GCA000012185_00630;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA000012185_00630;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006352,GO:0006355,GO:0016987;gene=rpoD;Parent=GCA000012185_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,RefSeq:WP_011272101.1,SO:0001217,UniParc:UPI000053E0E4,UniRef:UniRef100_Q4QN15,UniRef:UniRef50_P43766,UniRef:UniRef90_P43766
contig_1	Pyrodigal	gene	625686	627104	.	-	.	ID=GCA000012185_00631_gene;locus_tag=GCA000012185_00631;gene=aspA
contig_1	Pyrodigal	CDS	625686	627104	.	-	0	ID=GCA000012185_00631;Name=aspartate ammonia-lyase;locus_tag=GCA000012185_00631;product=aspartate ammonia-lyase;Dbxref=GO:0005829,GO:0006099,GO:0006520,GO:0006531,GO:0008797,GO:0010756;gene=aspA;Parent=GCA000012185_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1027,COG:E,RefSeq:WP_005687030.1,SO:0001217,UniParc:UPI0001A3F5D4,UniRef:UniRef100_Q4QN14,UniRef:UniRef50_P44324,UniRef:UniRef90_P44324;ec_number=4.3.1.1
contig_1	Pyrodigal	gene	627260	628075	.	-	.	ID=GCA000012185_00632_gene;locus_tag=GCA000012185_00632;gene=ureD
contig_1	Pyrodigal	CDS	627260	628075	.	-	0	ID=GCA000012185_00632;Name=Urease accessory protein UreD;locus_tag=GCA000012185_00632;product=Urease accessory protein UreD;Dbxref=GO:0005737,GO:0016151;gene=ureD;Parent=GCA000012185_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0829,COG:O,KEGG:K03190,RefSeq:WP_005660991.1,SO:0001217,UniParc:UPI00003CDCCE,UniRef:UniRef100_Q4QN13,UniRef:UniRef50_P44397,UniRef:UniRef90_A5UH41
contig_1	Pyrodigal	gene	628150	628785	.	-	.	ID=GCA000012185_00633_gene;locus_tag=GCA000012185_00633;gene=ureG
contig_1	Pyrodigal	CDS	628150	628785	.	-	0	ID=GCA000012185_00633;Name=urease accessory protein UreG;locus_tag=GCA000012185_00633;product=urease accessory protein UreG;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872;gene=ureG;Parent=GCA000012185_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K03189,RefSeq:WP_005688625.1,SO:0001217,UniParc:UPI0001A3F592,UniRef:UniRef100_Q4QN12,UniRef:UniRef50_A3Q0D3,UniRef:UniRef90_P44396
contig_1	Pyrodigal	gene	628930	629637	.	-	.	ID=GCA000012185_00634_gene;locus_tag=GCA000012185_00634;gene=ureF
contig_1	Pyrodigal	CDS	628930	629637	.	-	0	ID=GCA000012185_00634;Name=Urease accessory protein UreF;locus_tag=GCA000012185_00634;product=Urease accessory protein UreF;Dbxref=GO:0005737,GO:0016151;gene=ureF;Parent=GCA000012185_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0830,COG:O,KEGG:K03188,RefSeq:WP_005688623.1,SO:0001217,UniParc:UPI000053E0E7,UniRef:UniRef100_Q4QN11,UniRef:UniRef50_P44395,UniRef:UniRef90_P44395
contig_1	Pyrodigal	gene	629622	630179	.	-	.	ID=GCA000012185_00635_gene;locus_tag=GCA000012185_00635;gene=ureE
contig_1	Pyrodigal	CDS	629622	630179	.	-	0	ID=GCA000012185_00635;Name=urease accessory protein UreE;locus_tag=GCA000012185_00635;product=urease accessory protein UreE;Dbxref=GO:0005737,GO:0006457,GO:0016151,GO:0019627,GO:0051082,GO:0065003;gene=ureE;Parent=GCA000012185_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2371,COG:O,RefSeq:WP_005688622.1,SO:0001217,UniParc:UPI0000137DC1,UniRef:UniRef100_P44394,UniRef:UniRef50_O54422,UniRef:UniRef90_P44394
contig_1	Pyrodigal	gene	630307	632025	.	-	.	ID=GCA000012185_00636_gene;locus_tag=GCA000012185_00636;gene=ureC
contig_1	Pyrodigal	CDS	630307	632025	.	-	0	ID=GCA000012185_00636;Name=urease subunit alpha;locus_tag=GCA000012185_00636;product=urease subunit alpha;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0019627,GO:0043419;gene=ureC;Parent=GCA000012185_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0804,COG:E,KEGG:K01428,RefSeq:WP_005688620.1,SO:0001217,UniParc:UPI00003CDA0C,UniRef:UniRef100_Q4QN09,UniRef:UniRef50_Q9RYJ4,UniRef:UniRef90_P44391;ec_number=3.5.1.5
contig_1	Infernal	gene	631570	631872	.	+	.	ID=GCA000012185_00637_gene;locus_tag=GCA000012185_00637;gene=5_ureB_sRNA
contig_1	Infernal	ncRNA	631570	631872	1.7e-10	+	.	ID=GCA000012185_00637;Name=5' ureB small RNA;locus_tag=GCA000012185_00637;product=5' ureB small RNA;Dbxref=RFAM:RF02514;Parent=GCA000012185_00637_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02514
contig_1	Pyrodigal	gene	632037	632342	.	-	.	ID=GCA000012185_00638_gene;locus_tag=GCA000012185_00638;gene=ureB
contig_1	Pyrodigal	CDS	632037	632342	.	-	0	ID=GCA000012185_00638;Name=urease subunit beta;locus_tag=GCA000012185_00638;product=urease subunit beta;Dbxref=GO:0009039,GO:0035550,GO:0043419;gene=ureB;Parent=GCA000012185_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0832,COG:E,RefSeq:WP_005687041.1,SO:0001217,UniParc:UPI0000137D84,UniRef:UniRef100_P44392,UniRef:UniRef50_P44392,UniRef:UniRef90_P44392;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	632419	632721	.	-	.	ID=GCA000012185_00639_gene;locus_tag=GCA000012185_00639;gene=ureA
contig_1	Pyrodigal	CDS	632419	632721	.	-	0	ID=GCA000012185_00639;Name=urease subunit gamma;locus_tag=GCA000012185_00639;product=urease subunit gamma;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0043419;gene=ureA;Parent=GCA000012185_00639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0831,COG:E,RefSeq:WP_005651922.1,SO:0001217,UniParc:UPI000045E8BA,UniRef:UniRef100_Q4QN07,UniRef:UniRef50_Q4A0J3,UniRef:UniRef90_P44393;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	632884	633174	.	+	.	ID=GCA000012185_00640_gene;locus_tag=GCA000012185_00640;gene=groES
contig_1	Pyrodigal	CDS	632884	633174	.	+	0	ID=GCA000012185_00640;Name=Co-chaperonin GroES;locus_tag=GCA000012185_00640;product=Co-chaperonin GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000012185_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,RefSeq:WP_005717461.1,SO:0001217,UniParc:UPI000012763B,UniRef:UniRef100_Q59686,UniRef:UniRef50_P43734,UniRef:UniRef90_Q59686
contig_1	Pyrodigal	gene	633197	634834	.	+	.	ID=GCA000012185_00641_gene;locus_tag=GCA000012185_00641;gene=groL
contig_1	Pyrodigal	CDS	633197	634834	.	+	0	ID=GCA000012185_00641;Name=chaperonin GroEL;locus_tag=GCA000012185_00641;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA000012185_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_011272104.1,SO:0001217,UniParc:UPI000053E0E8,UniRef:UniRef100_Q4QN05,UniRef:UniRef50_P0A6F5,UniRef:UniRef90_P43733;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	635008	635457	.	-	.	ID=GCA000012185_00642_gene;locus_tag=GCA000012185_00642;gene=rplI
contig_1	Pyrodigal	CDS	635008	635457	.	-	0	ID=GCA000012185_00642;Name=50S ribosomal protein L9;locus_tag=GCA000012185_00642;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplI;Parent=GCA000012185_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,RefSeq:WP_005660979.1,SO:0001217,UniParc:UPI00003CDA85,UniRef:UniRef100_Q4QN04,UniRef:UniRef50_P44349,UniRef:UniRef90_P44349
contig_1	Pyrodigal	gene	635474	635701	.	-	.	ID=GCA000012185_00643_gene;locus_tag=GCA000012185_00643;gene=rpsR
contig_1	Pyrodigal	CDS	635474	635701	.	-	0	ID=GCA000012185_00643;Name=30S ribosomal protein S18;locus_tag=GCA000012185_00643;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000012185_00643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_005598105.1,SO:0001217,UniParc:UPI00001685AE,UniRef:UniRef100_P66457,UniRef:UniRef50_P66457,UniRef:UniRef90_P66457
contig_1	Pyrodigal	gene	635714	635998	.	-	.	ID=GCA000012185_00644_gene;locus_tag=GCA000012185_00644;gene=priB
contig_1	Pyrodigal	CDS	635714	635998	.	-	0	ID=GCA000012185_00644;Name=primosomal replication protein N;locus_tag=GCA000012185_00644;product=primosomal replication protein N;Dbxref=GO:0003697,GO:0006260,GO:0006269,GO:0030894,GO:1990077;gene=priB;Parent=GCA000012185_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2965,COG:L,SO:0001217,UniParc:UPI000039A5F0,UniRef:UniRef100_Q4QN02,UniRef:UniRef50_P07013,UniRef:UniRef90_P44748
contig_1	Pyrodigal	gene	636027	636404	.	-	.	ID=GCA000012185_00645_gene;locus_tag=GCA000012185_00645;gene=rpsF
contig_1	Pyrodigal	CDS	636027	636404	.	-	0	ID=GCA000012185_00645;Name=30S ribosomal protein S6;locus_tag=GCA000012185_00645;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsF;Parent=GCA000012185_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_005627620.1,SO:0001217,UniParc:UPI00001350AE,UniRef:UniRef100_P44375,UniRef:UniRef50_P44375,UniRef:UniRef90_P44375
contig_1	Infernal	regulatory_region	636402	636487	6.1e-08	-	.	ID=JPLKGDNPJF_110;Name=RpsF leader;product=RpsF leader;Dbxref=RFAM:RF02893;inference=profile:Rfam:RF02893;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	636596	636814	.	-	.	ID=GCA000012185_00646_gene;locus_tag=GCA000012185_00646;gene=infA
contig_1	Pyrodigal	CDS	636596	636814	.	-	0	ID=GCA000012185_00646;Name=translation initiation factor IF-1;locus_tag=GCA000012185_00646;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000012185_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_005627617.1,SO:0001217,UniParc:UPI000019B2F1,UniRef:UniRef100_P44322,UniRef:UniRef50_P44322,UniRef:UniRef90_P44322
contig_1	Pyrodigal	gene	637025	637222	.	+	.	ID=GCA000012185_00647_gene;locus_tag=GCA000012185_00647
contig_1	Pyrodigal	CDS	637025	637222	.	+	0	ID=GCA000012185_00647;Name=hypothetical protein;locus_tag=GCA000012185_00647;product=hypothetical protein;Parent=GCA000012185_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CD72D,UniRef:UniRef100_A0AB37BDL4,UniRef:UniRef50_A0AB37BDL4,UniRef:UniRef90_A0AB37BDL4
contig_1	Pyrodigal	gene	637419	638099	.	+	.	ID=GCA000012185_00648_gene;locus_tag=GCA000012185_00648
contig_1	Pyrodigal	CDS	637419	638099	.	+	0	ID=GCA000012185_00648;Name=Glycosyl transferase family 1;locus_tag=GCA000012185_00648;product=Glycosyl transferase family 1;Parent=GCA000012185_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CD72C,UniRef:UniRef100_A0AB37B7Q7,UniRef:UniRef50_A0A1V3I7X3,UniRef:UniRef90_A0A1B8R051
contig_1	Pyrodigal	gene	638183	639046	.	+	.	ID=GCA000012185_00649_gene;locus_tag=GCA000012185_00649;gene=rsmA
contig_1	Pyrodigal	CDS	638183	639046	.	+	0	ID=GCA000012185_00649;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA000012185_00649;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0031167,GO:0052908;gene=rsmA;Parent=GCA000012185_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0030,COG:J,RefSeq:WP_005660972.1,SO:0001217,UniParc:UPI00003CD72B,UniRef:UniRef100_Q4QMZ9,UniRef:UniRef50_P06992,UniRef:UniRef90_P44749;ec_number=2.1.1.182
contig_1	Pyrodigal	gene	639086	639958	.	-	.	ID=GCA000012185_00650_gene;locus_tag=GCA000012185_00650;gene=lic2A
contig_1	Pyrodigal	CDS	639086	639958	.	-	0	ID=GCA000012185_00650;Name=glycosyltransferase;locus_tag=GCA000012185_00650;product=glycosyltransferase;gene=lic2A;Parent=GCA000012185_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174738.1,SO:0001217,UniParc:UPI00003CD72A,UniRef:UniRef100_Q4QMZ8,UniRef:UniRef50_Q03974,UniRef:UniRef90_Q4QMZ8,VFDB:VFC0258,VFDB:VFG000333
contig_1	Pyrodigal	gene	640077	640904	.	+	.	ID=GCA000012185_00651_gene;locus_tag=GCA000012185_00651;gene=apaH
contig_1	Pyrodigal	CDS	640077	640904	.	+	0	ID=GCA000012185_00651;Name=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;locus_tag=GCA000012185_00651;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;Dbxref=GO:0008803;gene=apaH;Parent=GCA000012185_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005657958.1,SO:0001217,UniParc:UPI00003CD729,UniRef:UniRef100_Q4QMZ7,UniRef:UniRef50_P44751,UniRef:UniRef90_Q4QMZ7;ec_number=3.6.1.41
contig_1	Pyrodigal	gene	640914	641537	.	+	.	ID=GCA000012185_00652_gene;locus_tag=GCA000012185_00652
contig_1	Pyrodigal	CDS	640914	641537	.	+	0	ID=GCA000012185_00652;Name=putative protein HI_0552;locus_tag=GCA000012185_00652;product=putative protein HI_0552;Parent=GCA000012185_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005657956.1,SO:0001217,UniParc:UPI00003CD728,UniRef:UniRef100_A0A0H3PCP9,UniRef:UniRef50_P44013,UniRef:UniRef90_P44013
contig_1	Pyrodigal	gene	641663	643117	.	-	.	ID=GCA000012185_00653_gene;locus_tag=GCA000012185_00653;gene=gnd
contig_1	Pyrodigal	CDS	641663	643117	.	-	0	ID=GCA000012185_00653;Name=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;locus_tag=GCA000012185_00653;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0005737,GO:0005829,GO:0006098,GO:0009051,GO:0046177,GO:0050661;gene=gnd;Parent=GCA000012185_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0362,COG:G,KEGG:K00033,RefSeq:WP_005657953.1,SO:0001217,UniParc:UPI000053E0EB,UniRef:UniRef100_A0A0H3PGB5,UniRef:UniRef50_P78812,UniRef:UniRef90_P43774;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	643233	643775	.	-	.	ID=GCA000012185_00654_gene;locus_tag=GCA000012185_00654;gene=rAYT
contig_1	Pyrodigal	CDS	643233	643775	.	-	0	ID=GCA000012185_00654;Name=putative protein HI_0554;locus_tag=GCA000012185_00654;product=putative protein HI_0554;Dbxref=GO:0004803,GO:0006310,GO:0006313,GO:0043565;gene=rAYT;Parent=GCA000012185_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1943,COG:X,RefSeq:WP_005657951.1,SO:0001217,UniParc:UPI00003CD725,UniRef:UniRef100_A0A0H3PBV1,UniRef:UniRef50_P44014,UniRef:UniRef90_P44014
contig_1	Pyrodigal	gene	644116	644814	.	-	.	ID=GCA000012185_00655_gene;locus_tag=GCA000012185_00655;gene=pgl
contig_1	Pyrodigal	CDS	644116	644814	.	-	0	ID=GCA000012185_00655;Name=6-phosphogluconolactonase;locus_tag=GCA000012185_00655;product=6-phosphogluconolactonase;Dbxref=GO:0005829,GO:0005975,GO:0009051,GO:0017057;gene=pgl;Parent=GCA000012185_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,KEGG:K01057,RefSeq:WP_005660966.1,SO:0001217,UniParc:UPI00003CD724,UniRef:UniRef100_Q4QMZ2,UniRef:UniRef50_Q57039,UniRef:UniRef90_Q57039;ec_number=3.1.1.31
contig_1	Pyrodigal	gene	644957	646441	.	-	.	ID=GCA000012185_00656_gene;locus_tag=GCA000012185_00656;gene=zwf
contig_1	Pyrodigal	CDS	644957	646441	.	-	0	ID=GCA000012185_00656;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000012185_00656;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0005829,GO:0006006,GO:0006098,GO:0009051,GO:0016614,GO:0050661;gene=zwf;Parent=GCA000012185_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,KEGG:K00036,RefSeq:WP_011272106.1,SO:0001217,UniParc:UPI000045E8BF,UniRef:UniRef100_A0A2R3GAL5,UniRef:UniRef50_P44311,UniRef:UniRef90_P44311;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	646517	647326	.	-	.	ID=GCA000012185_00657_gene;locus_tag=GCA000012185_00657;gene=cysQ
contig_1	Pyrodigal	CDS	646517	647326	.	-	0	ID=GCA000012185_00657;Name=3'(2')%2C5'-bisphosphate nucleotidase CysQ;locus_tag=GCA000012185_00657;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;Dbxref=GO:0000103,GO:0000287,GO:0005886,GO:0006790,GO:0008441,GO:0046854,GO:0050427;gene=cysQ;Parent=GCA000012185_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1218,COG:P,KEGG:K01082,RefSeq:WP_005690243.1,SO:0001217,UniParc:UPI00003CD722,UniRef:UniRef100_A0A2S9S7I2,UniRef:UniRef50_P44332,UniRef:UniRef90_P44332;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	647331	647747	.	-	.	ID=GCA000012185_00658_gene;locus_tag=GCA000012185_00658
contig_1	Pyrodigal	CDS	647331	647747	.	-	0	ID=GCA000012185_00658;Name=hypothetical protein;locus_tag=GCA000012185_00658;product=hypothetical protein;Parent=GCA000012185_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005690245.1,SO:0001217,UniParc:UPI00003CD721,UniRef:UniRef100_A0A2S9S7H5,UniRef:UniRef90_O86226
contig_1	Pyrodigal	gene	647804	649786	.	-	.	ID=GCA000012185_00659_gene;locus_tag=GCA000012185_00659;gene=oPT
contig_1	Pyrodigal	CDS	647804	649786	.	-	0	ID=GCA000012185_00659;Name=OPT family oligopeptide transporter;locus_tag=GCA000012185_00659;product=OPT family oligopeptide transporter;Dbxref=GO:0005886,GO:0006857,GO:0015031,GO:0016020,GO:0035673;gene=oPT;Parent=GCA000012185_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1297,COG:R,RefSeq:WP_011272107.1,SO:0001217,UniParc:UPI000053E0EE,UniRef:UniRef100_Q4QMY8,UniRef:UniRef50_P44016,UniRef:UniRef90_P44016
contig_1	Pyrodigal	gene	650015	650410	.	+	.	ID=GCA000012185_00660_gene;locus_tag=GCA000012185_00660;gene=hslR
contig_1	Pyrodigal	CDS	650015	650410	.	+	0	ID=GCA000012185_00660;Name=ribosome-associated heat shock protein Hsp15;locus_tag=GCA000012185_00660;product=ribosome-associated heat shock protein Hsp15;Dbxref=GO:0003677,GO:0003727,GO:0034605,GO:0043023;gene=hslR;Parent=GCA000012185_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1188,COG:J,KEGG:K04762,RefSeq:WP_005654696.1,SO:0001217,UniParc:UPI000012CD11,UniRef:UniRef100_P44754,UniRef:UniRef50_P44754,UniRef:UniRef90_P44754
contig_1	Pyrodigal	gene	650436	650888	.	-	.	ID=GCA000012185_00661_gene;locus_tag=GCA000012185_00661;gene=asnC
contig_1	Pyrodigal	CDS	650436	650888	.	-	0	ID=GCA000012185_00661;Name=transcriptional regulator AsnC;locus_tag=GCA000012185_00661;product=transcriptional regulator AsnC;Dbxref=GO:0043565;gene=asnC;Parent=GCA000012185_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005649540.1,SO:0001217,UniParc:UPI0000126122,UniRef:UniRef100_P44337,UniRef:UniRef50_P44337,UniRef:UniRef90_P44337
contig_1	Pyrodigal	gene	651042	652034	.	+	.	ID=GCA000012185_00662_gene;locus_tag=GCA000012185_00662;gene=asnA
contig_1	Pyrodigal	CDS	651042	652034	.	+	0	ID=GCA000012185_00662;Name=aspartate--ammonia ligase;locus_tag=GCA000012185_00662;product=aspartate--ammonia ligase;Dbxref=GO:0004071,GO:0005524,GO:0005737,GO:0005829,GO:0006529,GO:0070981;gene=asnA;Parent=GCA000012185_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2502,COG:E,KEGG:K01914,RefSeq:WP_011272108.1,SO:0001217,UniParc:UPI000053E0EF,UniRef:UniRef100_Q4QMY5,UniRef:UniRef50_P00963,UniRef:UniRef90_P44338;ec_number=6.3.1.1
contig_1	Pyrodigal	gene	653063	653920	.	+	.	ID=GCA000012185_00663_gene;locus_tag=GCA000012185_00663;gene=fkbM
contig_1	Pyrodigal	CDS	653063	653920	.	+	0	ID=GCA000012185_00663;Name=Methyltransferase FkbM domain-containing protein;locus_tag=GCA000012185_00663;product=Methyltransferase FkbM domain-containing protein;gene=fkbM;Parent=GCA000012185_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272110.1,SO:0001217,UniParc:UPI00003CD71D,UniRef:UniRef100_Q4QMY3,UniRef:UniRef50_A0A379B206,UniRef:UniRef90_Q4QMY3
contig_1	Pyrodigal	gene	654361	654714	.	-	.	ID=GCA000012185_00664_gene;locus_tag=GCA000012185_00664
contig_1	Pyrodigal	CDS	654361	654714	.	-	0	ID=GCA000012185_00664;Name=Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein;locus_tag=GCA000012185_00664;product=Insertion element IS150 protein InsJ-like helix-turn-helix domain-containing protein;Parent=GCA000012185_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174739.1,SO:0001217,UniParc:UPI00003CD71C,UniRef:UniRef100_UPI00003CD71C,UniRef:UniRef50_A0A2X4R2E7,UniRef:UniRef90_A0A2X4R2E7
contig_1	Pyrodigal	gene	654805	655479	.	-	.	ID=GCA000012185_00665_gene;locus_tag=GCA000012185_00665;gene=gph
contig_1	Pyrodigal	CDS	654805	655479	.	-	0	ID=GCA000012185_00665;Name=phosphoglycolate phosphatase;locus_tag=GCA000012185_00665;product=phosphoglycolate phosphatase;Dbxref=GO:0005829,GO:0005975,GO:0006281,GO:0008967,GO:0046295,GO:0046872;gene=gph;Parent=GCA000012185_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_005657931.1,SO:0001217,UniParc:UPI00003CD71B,UniRef:UniRef100_Q4QMY0,UniRef:UniRef50_P44755,UniRef:UniRef90_P44755;ec_number=3.1.3.18
contig_1	Pyrodigal	gene	655525	656199	.	-	.	ID=GCA000012185_00666_gene;locus_tag=GCA000012185_00666;gene=rpe
contig_1	Pyrodigal	CDS	655525	656199	.	-	0	ID=GCA000012185_00666;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA000012185_00666;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0005829,GO:0005975,GO:0006098,GO:0009052,GO:0019323,GO:0046872;gene=rpe;Parent=GCA000012185_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0036,COG:G,KEGG:K01783,RefSeq:WP_005657929.1,SO:0001217,UniParc:UPI00003CD71A,UniRef:UniRef100_Q4QMX9,UniRef:UniRef50_P44756,UniRef:UniRef90_P44756;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	656351	658771	.	-	.	ID=GCA000012185_00667_gene;locus_tag=GCA000012185_00667;gene=gyrB
contig_1	Pyrodigal	CDS	656351	658771	.	-	0	ID=GCA000012185_00667;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000012185_00667;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046872;gene=gyrB;Parent=GCA000012185_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_005690204.1,SO:0001217,UniParc:UPI000053E0F4,UniRef:UniRef100_A0AAP8SG59,UniRef:UniRef50_P13364,UniRef:UniRef90_P43701;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	658897	661209	.	-	.	ID=GCA000012185_00668_gene;locus_tag=GCA000012185_00668;gene=tex
contig_1	Pyrodigal	CDS	658897	661209	.	-	0	ID=GCA000012185_00668;Name=putative protein HI_0568;locus_tag=GCA000012185_00668;product=putative protein HI_0568;Dbxref=GO:0003729,GO:0003735,GO:0005829,GO:0006139,GO:0006412;gene=tex;Parent=GCA000012185_00668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,RefSeq:WP_011272113.1,SO:0001217,UniParc:UPI00003CD717,UniRef:UniRef100_Q4QMX7,UniRef:UniRef50_P71353,UniRef:UniRef90_P71353
contig_1	Pyrodigal	gene	661305	661781	.	+	.	ID=GCA000012185_00669_gene;locus_tag=GCA000012185_00669;gene=greB
contig_1	Pyrodigal	CDS	661305	661781	.	+	0	ID=GCA000012185_00669;Name=transcription elongation factor GreB;locus_tag=GCA000012185_00669;product=transcription elongation factor GreB;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greB;Parent=GCA000012185_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_011272114.1,SO:0001217,UniParc:UPI00003CD716,UniRef:UniRef100_A0A2S9S7J2,UniRef:UniRef50_P43882,UniRef:UniRef90_P43882
contig_1	Pyrodigal	gene	661851	662468	.	-	.	ID=GCA000012185_00670_gene;locus_tag=GCA000012185_00670;gene=fabR
contig_1	Pyrodigal	CDS	661851	662468	.	-	0	ID=GCA000012185_00670;Name=HTH-type transcriptional repressor FabR;locus_tag=GCA000012185_00670;product=HTH-type transcriptional repressor FabR;Dbxref=GO:0003677;gene=fabR;Parent=GCA000012185_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_005629669.1,SO:0001217,UniParc:UPI000013B426,UniRef:UniRef100_P44757,UniRef:UniRef50_P44757,UniRef:UniRef90_P44757
contig_1	Pyrodigal	gene	662468	663373	.	-	.	ID=GCA000012185_00671_gene;locus_tag=GCA000012185_00671;gene=oxyR
contig_1	Pyrodigal	CDS	662468	663373	.	-	0	ID=GCA000012185_00671;Name=DNA-binding transcriptional regulator OxyR;locus_tag=GCA000012185_00671;product=DNA-binding transcriptional regulator OxyR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0032993;gene=oxyR;Parent=GCA000012185_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005649559.1,SO:0001217,UniParc:UPI0000130F7C,UniRef:UniRef100_P44418,UniRef:UniRef50_P44418,UniRef:UniRef90_P44418
contig_1	Pyrodigal	gene	663496	664221	.	+	.	ID=GCA000012185_00672_gene;locus_tag=GCA000012185_00672;gene=pGdx
contig_1	Pyrodigal	CDS	663496	664221	.	+	0	ID=GCA000012185_00672;Name=Hybrid peroxiredoxin hyPrx5;locus_tag=GCA000012185_00672;product=Hybrid peroxiredoxin hyPrx5;Dbxref=GO:0005737,GO:0008379,GO:0034599,GO:0042744,GO:0045454;gene=pGdx;Parent=GCA000012185_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,KEGG:K24136,RefSeq:WP_005649562.1,SO:0001217,UniParc:UPI000039AEE9,UniRef:UniRef100_A4NUZ4,UniRef:UniRef50_P44758,UniRef:UniRef90_P44758;ec_number=1.11.1.27
contig_1	Pyrodigal	gene	664313	664534	.	-	.	ID=GCA000012185_00673_gene;locus_tag=GCA000012185_00673;gene=slyX
contig_1	Pyrodigal	CDS	664313	664534	.	-	0	ID=GCA000012185_00673;Name=Protein SlyX-like protein;locus_tag=GCA000012185_00673;product=Protein SlyX-like protein;gene=slyX;Parent=GCA000012185_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2900,COG:S,RefSeq:WP_005649565.1,SO:0001217,UniParc:UPI000039A609,UniRef:UniRef100_Q4QMX2,UniRef:UniRef50_P44759,UniRef:UniRef90_P44759
contig_1	Pyrodigal	gene	664632	665357	.	+	.	ID=GCA000012185_00674_gene;locus_tag=GCA000012185_00674;gene=fkpA
contig_1	Pyrodigal	CDS	664632	665357	.	+	0	ID=GCA000012185_00674;Name=FKBP-type peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000012185_00674;product=FKBP-type peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0003755,GO:0006457,GO:0140839,GO:0140840;gene=fkpA;Parent=GCA000012185_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0545,COG:O,RefSeq:WP_005657915.1,SO:0001217,UniParc:UPI00003CD713,UniRef:UniRef100_A0A0H3PCL4,UniRef:UniRef50_P44760,UniRef:UniRef90_P44760;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	665447	666112	.	+	.	ID=GCA000012185_00675_gene;locus_tag=GCA000012185_00675;gene=yheO
contig_1	Pyrodigal	CDS	665447	666112	.	+	0	ID=GCA000012185_00675;Name=putative protein HI_0575;locus_tag=GCA000012185_00675;product=putative protein HI_0575;gene=yheO;Parent=GCA000012185_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2964,COG:K,RefSeq:WP_005657913.1,SO:0001217,UniParc:UPI000039A60B,UniRef:UniRef100_A0A0H3PG67,UniRef:UniRef50_P64624,UniRef:UniRef90_P44761
contig_1	Pyrodigal	gene	666112	666492	.	+	.	ID=GCA000012185_00676_gene;locus_tag=GCA000012185_00676;gene=tusD
contig_1	Pyrodigal	CDS	666112	666492	.	+	0	ID=GCA000012185_00676;Name=sulfurtransferase complex subunit TusD;locus_tag=GCA000012185_00676;product=sulfurtransferase complex subunit TusD;Dbxref=GO:0002143,GO:0005829,GO:0008033,GO:0016783,GO:0097163,GO:1990228;gene=tusD;Parent=GCA000012185_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1553,COG:J,KEGG:K07235,RefSeq:WP_005692018.1,SO:0001217,UniParc:UPI00003CD712,UniRef:UniRef100_A0A2S9SAV9,UniRef:UniRef50_P44762,UniRef:UniRef90_P44762;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	666489	666848	.	+	.	ID=GCA000012185_00677_gene;locus_tag=GCA000012185_00677;gene=tusC
contig_1	Pyrodigal	CDS	666489	666848	.	+	0	ID=GCA000012185_00677;Name=sulfurtransferase complex subunit TusC;locus_tag=GCA000012185_00677;product=sulfurtransferase complex subunit TusC;Dbxref=GO:0005737;gene=tusC;Parent=GCA000012185_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2923,COG:J,KEGG:K07236,RefSeq:WP_005687089.1,SO:0001217,UniParc:UPI000039A60D,UniRef:UniRef100_Q4QMW8,UniRef:UniRef50_Q57194,UniRef:UniRef90_Q57194;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	666857	667144	.	+	.	ID=GCA000012185_00678_gene;locus_tag=GCA000012185_00678;gene=dsrH
contig_1	Pyrodigal	CDS	666857	667144	.	+	0	ID=GCA000012185_00678;Name=putative protein HI_0577;locus_tag=GCA000012185_00678;product=putative protein HI_0577;Dbxref=GO:0002143,GO:0005737;gene=dsrH;Parent=GCA000012185_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2168,COG:J,KEGG:K07237,RefSeq:WP_005649577.1,SO:0001217,UniParc:UPI0000139ACB,UniRef:UniRef100_P44017,UniRef:UniRef50_P44017,UniRef:UniRef90_P44017
contig_1	Pyrodigal	gene	667275	668459	.	-	.	ID=GCA000012185_00679_gene;locus_tag=GCA000012185_00679;gene=tuf
contig_1	Pyrodigal	CDS	667275	668459	.	-	0	ID=GCA000012185_00679;Name=elongation factor Tu;locus_tag=GCA000012185_00679;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414,GO:0097216;gene=tuf;Parent=GCA000012185_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_005654658.1,SO:0001217,UniParc:UPI000039A974,UniRef:UniRef100_Q4QMW6,UniRef:UniRef50_P43926,UniRef:UniRef90_P43926
contig_1	tRNAscan-SE	gene	668564	668639	.	-	.	ID=GCA000012185_00680_gene;locus_tag=GCA000012185_00680;gene=trnT
contig_1	tRNAscan-SE	tRNA	668564	668639	.	-	.	ID=GCA000012185_00680;Name=tRNA-Thr(ggt);locus_tag=GCA000012185_00680;product=tRNA-Thr(ggt);gene=trnT;anti_codon=ggt;amino_acid=Thr;Parent=GCA000012185_00680_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	668643	668717	.	-	.	ID=GCA000012185_00681_gene;locus_tag=GCA000012185_00681;gene=trnG
contig_1	tRNAscan-SE	tRNA	668643	668717	.	-	.	ID=GCA000012185_00681;Name=tRNA-Gly(tcc);locus_tag=GCA000012185_00681;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000012185_00681_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	668760	668844	.	-	.	ID=GCA000012185_00682_gene;locus_tag=GCA000012185_00682;gene=trnY
contig_1	tRNAscan-SE	tRNA	668760	668844	.	-	.	ID=GCA000012185_00682;Name=tRNA-Tyr(gta);locus_tag=GCA000012185_00682;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000012185_00682_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	668874	668949	.	-	.	ID=GCA000012185_00683_gene;locus_tag=GCA000012185_00683;gene=trnT
contig_1	tRNAscan-SE	tRNA	668874	668949	.	-	.	ID=GCA000012185_00683;Name=tRNA-Thr(tgt);locus_tag=GCA000012185_00683;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000012185_00683_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Pyrodigal	gene	669165	670088	.	+	.	ID=GCA000012185_00684_gene;locus_tag=GCA000012185_00684;gene=coaA
contig_1	Pyrodigal	CDS	669165	670088	.	+	0	ID=GCA000012185_00684;Name=type I pantothenate kinase;locus_tag=GCA000012185_00684;product=type I pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005737,GO:0015937;gene=coaA;Parent=GCA000012185_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1072,COG:H,KEGG:K00867,RefSeq:WP_005655205.1,SO:0001217,UniParc:UPI000039A973,UniRef:UniRef100_A0A1Q5Y1S7,UniRef:UniRef50_P44793,UniRef:UniRef90_P44793;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	670179	671126	.	-	.	ID=GCA000012185_00685_gene;locus_tag=GCA000012185_00685;gene=rseB
contig_1	Pyrodigal	CDS	670179	671126	.	-	0	ID=GCA000012185_00685;Name=sigma-E factor regulatory protein RseB;locus_tag=GCA000012185_00685;product=sigma-E factor regulatory protein RseB;Dbxref=GO:0008289,GO:0030288,GO:0032885,GO:0045152;gene=rseB;Parent=GCA000012185_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03598,RefSeq:WP_011272115.1,SO:0001217,UniParc:UPI000053E0F5,UniRef:UniRef100_A0A2S9S7X2,UniRef:UniRef50_P44792,UniRef:UniRef90_P44792
contig_1	Pyrodigal	gene	671206	671781	.	-	.	ID=GCA000012185_00686_gene;locus_tag=GCA000012185_00686;gene=rseA
contig_1	Pyrodigal	CDS	671206	671781	.	-	0	ID=GCA000012185_00686;Name=Anti-sigma-E factor RseA;locus_tag=GCA000012185_00686;product=Anti-sigma-E factor RseA;Dbxref=GO:0005886,GO:0016989;gene=rseA;Parent=GCA000012185_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3073,COG:T,KEGG:K03597,RefSeq:WP_011272116.1,SO:0001217,UniParc:UPI00003CDBFA,UniRef:UniRef100_A0A2R3FX37,UniRef:UniRef50_P44791,UniRef:UniRef90_P44791
contig_1	Pyrodigal	gene	671806	672375	.	-	.	ID=GCA000012185_00687_gene;locus_tag=GCA000012185_00687;gene=rpoE
contig_1	Pyrodigal	CDS	671806	672375	.	-	0	ID=GCA000012185_00687;Name=RNA polymerase sigma factor RpoE;locus_tag=GCA000012185_00687;product=RNA polymerase sigma factor RpoE;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006352,GO:0006355,GO:0016987;gene=rpoE;Parent=GCA000012185_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_005655198.1,SO:0001217,UniParc:UPI000053E0F6,UniRef:UniRef100_A0A0D0HSW6,UniRef:UniRef50_P44790,UniRef:UniRef90_P44790
contig_1	Pyrodigal	gene	672484	672741	.	-	.	ID=GCA000012185_00688_gene;locus_tag=GCA000012185_00688;gene=sdhE
contig_1	Pyrodigal	CDS	672484	672741	.	-	0	ID=GCA000012185_00688;Name=FAD assembly factor SdhE;locus_tag=GCA000012185_00688;product=FAD assembly factor SdhE;Dbxref=GO:0005737,GO:0006105;gene=sdhE;Parent=GCA000012185_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2938,COG:O,RefSeq:WP_005672506.1,SO:0001217,UniParc:UPI00003CD8B2,UniRef:UniRef100_Q4QMW1,UniRef:UniRef50_Q65QC6,UniRef:UniRef90_P44025
contig_1	Pyrodigal	gene	672831	673217	.	-	.	ID=GCA000012185_00689_gene;locus_tag=GCA000012185_00689;gene=mscL
contig_1	Pyrodigal	CDS	672831	673217	.	-	0	ID=GCA000012185_00689;Name=large-conductance mechanosensitive channel protein MscL;locus_tag=GCA000012185_00689;product=large-conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0006811,GO:0008381,GO:0016020,GO:0034220;gene=mscL;Parent=GCA000012185_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,RefSeq:WP_005651263.1,SO:0001217,UniParc:UPI000039A96F,UniRef:UniRef100_Q4QMW0,UniRef:UniRef50_P44789,UniRef:UniRef90_P44789
contig_1	Pyrodigal	gene	673290	674666	.	-	.	ID=GCA000012185_00690_gene;locus_tag=GCA000012185_00690;gene=trkA
contig_1	Pyrodigal	CDS	673290	674666	.	-	0	ID=GCA000012185_00690;Name=Trk system potassium transporter TrkA;locus_tag=GCA000012185_00690;product=Trk system potassium transporter TrkA;Dbxref=GO:0005886,GO:0006813,GO:0015079,GO:0016020;gene=trkA;Parent=GCA000012185_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_005655192.1,SO:0001217,UniParc:UPI00003CD8B1,UniRef:UniRef100_A0A2V0S0M3,UniRef:UniRef50_P0AGI8,UniRef:UniRef90_P71354
contig_1	Pyrodigal	gene	674679	676031	.	-	.	ID=GCA000012185_00691_gene;locus_tag=GCA000012185_00691;gene=rsmB
contig_1	Pyrodigal	CDS	674679	676031	.	-	0	ID=GCA000012185_00691;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA000012185_00691;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0003723,GO:0005829,GO:0006355,GO:0008649,GO:0009383,GO:0016434,GO:0070475;gene=rsmB;Parent=GCA000012185_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0144,COG:J,KEGG:K03500,RefSeq:WP_011272117.1,SO:0001217,UniParc:UPI00003CD8B0,UniRef:UniRef100_A0A2S9S7X8,UniRef:UniRef50_P44788,UniRef:UniRef90_P44788;ec_number=2.1.1.176
contig_1	Pyrodigal	gene	676031	676987	.	-	.	ID=GCA000012185_00692_gene;locus_tag=GCA000012185_00692;gene=fmt
contig_1	Pyrodigal	CDS	676031	676987	.	-	0	ID=GCA000012185_00692;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000012185_00692;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000012185_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,RefSeq:WP_011272118.1,SO:0001217,UniParc:UPI00003CD8AF,UniRef:UniRef100_Q4QMV7,UniRef:UniRef50_Q83AA8,UniRef:UniRef90_P44787;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	677088	677597	.	-	.	ID=GCA000012185_00693_gene;locus_tag=GCA000012185_00693;gene=def
contig_1	Pyrodigal	CDS	677088	677597	.	-	0	ID=GCA000012185_00693;Name=peptide deformylase;locus_tag=GCA000012185_00693;product=peptide deformylase;Dbxref=GO:0006412,GO:0036211,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000012185_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_005630900.1,SO:0001217,UniParc:UPI000039A96B,UniRef:UniRef100_Q4QMV6,UniRef:UniRef50_P0A6K3,UniRef:UniRef90_Q4QMV6;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	677787	678209	.	-	.	ID=GCA000012185_00694_gene;locus_tag=GCA000012185_00694;gene=ybjN
contig_1	Pyrodigal	CDS	677787	678209	.	-	0	ID=GCA000012185_00694;Name=YbjN domain-containing protein;locus_tag=GCA000012185_00694;product=YbjN domain-containing protein;gene=ybjN;Parent=GCA000012185_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005667551.1,SO:0001217,UniParc:UPI000039A96A,UniRef:UniRef100_Q4QMV5,UniRef:UniRef50_Q4QMV5,UniRef:UniRef90_Q4QMV5
contig_1	Pyrodigal	gene	678202	678387	.	-	.	ID=GCA000012185_00695_gene;locus_tag=GCA000012185_00695
contig_1	Pyrodigal	CDS	678202	678387	.	-	0	ID=GCA000012185_00695;Name=hypothetical protein;locus_tag=GCA000012185_00695;product=hypothetical protein;Parent=GCA000012185_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272120.1,SO:0001217,UniParc:UPI000053E0F8,UniRef:UniRef100_A0A2V0S0K4,UniRef:UniRef50_A0A1V3IQJ5,UniRef:UniRef90_A0A2V0S0K4
contig_1	Infernal	gene	678643	678758	.	-	.	ID=GCA000012185_00696_gene;locus_tag=GCA000012185_00696;gene=rrf
contig_1	Infernal	rRNA	678643	678758	5.6e-14	-	.	ID=GCA000012185_00696;Name=5S ribosomal RNA;locus_tag=GCA000012185_00696;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00696_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	679001	682115	.	-	.	ID=GCA000012185_00697_gene;locus_tag=GCA000012185_00697;gene=rrl
contig_1	Infernal	rRNA	679001	682115	3.1e-06	-	.	ID=GCA000012185_00697;Name=23S ribosomal RNA;locus_tag=GCA000012185_00697;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_00697_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	682515	682590	.	-	.	ID=GCA000012185_00698_gene;locus_tag=GCA000012185_00698;gene=trnA
contig_1	tRNAscan-SE	tRNA	682515	682590	.	-	.	ID=GCA000012185_00698;Name=tRNA-Ala(tgc);locus_tag=GCA000012185_00698;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000012185_00698_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	682676	682752	.	-	.	ID=GCA000012185_00699_gene;locus_tag=GCA000012185_00699;gene=trnI
contig_1	tRNAscan-SE	tRNA	682676	682752	.	-	.	ID=GCA000012185_00699;Name=tRNA-Ile(gat);locus_tag=GCA000012185_00699;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000012185_00699_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	682832	684371	.	-	.	ID=GCA000012185_00700_gene;locus_tag=GCA000012185_00700;gene=rrs
contig_1	Infernal	rRNA	682832	684371	5.8e-47	-	.	ID=GCA000012185_00700;Name=16S ribosomal RNA;locus_tag=GCA000012185_00700;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_00700_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	684668	685321	.	-	.	ID=GCA000012185_00701_gene;locus_tag=GCA000012185_00701;gene=tfoX
contig_1	Pyrodigal	CDS	684668	685321	.	-	0	ID=GCA000012185_00701;Name=DNA transformation protein TfoX;locus_tag=GCA000012185_00701;product=DNA transformation protein TfoX;Dbxref=GO:0006355,GO:0009267,GO:0009290,GO:0030420,GO:0045809,GO:0045893,GO:0071230,GO:0071320,GO:0071415;gene=tfoX;Parent=GCA000012185_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010869017,COG:COG3070,COG:K,RefSeq:WP_005692773.1,SO:0001217,UniParc:UPI000053E0F9,UniRef:UniRef100_A0A2S9RFC2,UniRef:UniRef50_P43779,UniRef:UniRef90_P43779
contig_1	Infernal	regulatory_region	685261	685364	1.6e-24	-	.	ID=JPLKGDNPJF_96;Name=sxy 5' UTR element;product=sxy 5' UTR element;Dbxref=RFAM:RF00632;inference=profile:Rfam:RF00632;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	685693	686757	.	+	.	ID=GCA000012185_00702_gene;locus_tag=GCA000012185_00702;gene=recA
contig_1	Pyrodigal	CDS	685693	686757	.	+	0	ID=GCA000012185_00702;Name=recombinase RecA;locus_tag=GCA000012185_00702;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA000012185_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_005654959.1,SO:0001217,UniParc:UPI00001334E8,UniRef:UniRef100_P43705,UniRef:UniRef50_P43705,UniRef:UniRef90_P43705
contig_1	Pyrodigal	gene	686836	687294	.	+	.	ID=GCA000012185_00703_gene;locus_tag=GCA000012185_00703;gene=recX
contig_1	Pyrodigal	CDS	686836	687294	.	+	0	ID=GCA000012185_00703;Name=recombination regulator RecX;locus_tag=GCA000012185_00703;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0006282;gene=recX;Parent=GCA000012185_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_011272121.1,SO:0001217,UniParc:UPI00003CDCFE,UniRef:UniRef100_Q4QMV1,UniRef:UniRef50_P43706,UniRef:UniRef90_P43706
contig_1	Pyrodigal	gene	687291	687677	.	-	.	ID=GCA000012185_00704_gene;locus_tag=GCA000012185_00704;gene=crcB
contig_1	Pyrodigal	CDS	687291	687677	.	-	0	ID=GCA000012185_00704;Name=fluoride efflux transporter CrcB;locus_tag=GCA000012185_00704;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0016020,GO:0046872,GO:0062054,GO:0140114,GO:1903424,GO:1903425;gene=crcB;Parent=GCA000012185_00704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_011272122.1,SO:0001217,UniParc:UPI000053E0FA,UniRef:UniRef100_Q4QMV0,UniRef:UniRef50_P46491,UniRef:UniRef90_P46491
contig_1	Pyrodigal	gene	687677	688495	.	-	.	ID=GCA000012185_00705_gene;locus_tag=GCA000012185_00705;gene=cof
contig_1	Pyrodigal	CDS	687677	688495	.	-	0	ID=GCA000012185_00705;Name=Putative phosphatase HI_0597;locus_tag=GCA000012185_00705;product=Putative phosphatase HI_0597;Dbxref=GO:0000287,GO:0016791;gene=cof;Parent=GCA000012185_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_011272123.1,SO:0001217,UniParc:UPI000053E0FB,UniRef:UniRef100_Q4QMU9,UniRef:UniRef50_P44771,UniRef:UniRef90_P44771;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	688898	689902	.	+	.	ID=GCA000012185_00706_gene;locus_tag=GCA000012185_00706;gene=arcB
contig_1	Pyrodigal	CDS	688898	689902	.	+	0	ID=GCA000012185_00706;Name=ornithine carbamoyltransferase;locus_tag=GCA000012185_00706;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006520,GO:0006591,GO:0016597,GO:0019240,GO:0019547,GO:0042450;gene=arcB;Parent=GCA000012185_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_005651072.1,SO:0001217,UniParc:UPI0000130F04,UniRef:UniRef100_P44770,UniRef:UniRef50_P08308,UniRef:UniRef90_P44770;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	689912	690844	.	+	.	ID=GCA000012185_00707_gene;locus_tag=GCA000012185_00707;gene=arcC
contig_1	Pyrodigal	CDS	689912	690844	.	+	0	ID=GCA000012185_00707;Name=carbamate kinase;locus_tag=GCA000012185_00707;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000012185_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_005661976.1,SO:0001217,UniParc:UPI000053E0FC,UniRef:UniRef100_A0A0D0GYN9,UniRef:UniRef50_P13982,UniRef:UniRef90_P44769;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	690949	692478	.	+	.	ID=GCA000012185_00708_gene;locus_tag=GCA000012185_00708;gene=yfcC
contig_1	Pyrodigal	CDS	690949	692478	.	+	0	ID=GCA000012185_00708;Name=putative protein HI_0594;locus_tag=GCA000012185_00708;product=putative protein HI_0594;Dbxref=GO:0005886;gene=yfcC;Parent=GCA000012185_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,RefSeq:WP_011272124.1,SO:0001217,UniParc:UPI000053E0FD,UniRef:UniRef100_Q4QMU6,UniRef:UniRef50_P44023,UniRef:UniRef90_P44023
contig_1	Pyrodigal	gene	692888	693055	.	+	.	ID=GCA000012185_00709_gene;locus_tag=GCA000012185_00709
contig_1	Pyrodigal	CDS	692888	693055	.	+	0	ID=GCA000012185_00709;Name=PT domain-containing protein;locus_tag=GCA000012185_00709;product=PT domain-containing protein;Parent=GCA000012185_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_204628236.1,SO:0001217,UniParc:UPI0000E6020C,UniRef:UniRef100_UPI0031EE1D95,UniRef:UniRef50_A0A2X1QJR2,UniRef:UniRef90_UPI002E17B121
contig_1	Pyrodigal	gene	693424	696042	.	+	.	ID=GCA000012185_00710_gene;locus_tag=GCA000012185_00710
contig_1	Pyrodigal	CDS	693424	696042	.	+	0	ID=GCA000012185_00710;Name=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;locus_tag=GCA000012185_00710;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;Parent=GCA000012185_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_050748024.1,SO:0001217,UniParc:UPI0002F9CFEC,UniRef:UniRef100_UPI000CFF0976,UniRef:UniRef50_O87296,UniRef:UniRef90_A0A3E1QER0
contig_1	Pyrodigal	gene	696448	696834	.	-	.	ID=GCA000012185_00711_gene;locus_tag=GCA000012185_00711
contig_1	Pyrodigal	CDS	696448	696834	.	-	0	ID=GCA000012185_00711;Name=Abi-like protein;locus_tag=GCA000012185_00711;product=Abi-like protein;Parent=GCA000012185_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174742.1,SO:0001217,UniParc:UPI00003CDAED,UniRef:UniRef100_A0A2S9S4B3,UniRef:UniRef50_A0A2S9S4B3,UniRef:UniRef90_A0A2S9S4B3
contig_1	Pyrodigal	gene	697114	697818	.	+	.	ID=GCA000012185_00712_gene;locus_tag=GCA000012185_00712;gene=pepE
contig_1	Pyrodigal	CDS	697114	697818	.	+	0	ID=GCA000012185_00712;Name=dipeptidase PepE;locus_tag=GCA000012185_00712;product=dipeptidase PepE;Dbxref=GO:0005737,GO:0006508,GO:0008236,GO:0016805;gene=pepE;Parent=GCA000012185_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3340,COG:E,RefSeq:WP_011272125.1,SO:0001217,UniParc:UPI00003CDAEE,UniRef:UniRef100_Q4QMU5,UniRef:UniRef50_P44766,UniRef:UniRef90_P44766;ec_number=3.4.13.21
contig_1	Pyrodigal	gene	697836	699131	.	+	.	ID=GCA000012185_00713_gene;locus_tag=GCA000012185_00713;gene=dcuC
contig_1	Pyrodigal	CDS	697836	699131	.	+	0	ID=GCA000012185_00713;Name=C4-dicarboxylate transporter DcuC;locus_tag=GCA000012185_00713;product=C4-dicarboxylate transporter DcuC;Dbxref=GO:0005886,GO:0015556,GO:0015740,GO:0016020;gene=dcuC;Parent=GCA000012185_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3069,KEGG:K03326,RefSeq:WP_011272126.1,SO:0001217,UniParc:UPI000053E0FE,UniRef:UniRef100_Q4QMU4,UniRef:UniRef50_P44018,UniRef:UniRef90_P44018
contig_1	Pyrodigal	gene	699203	700474	.	+	.	ID=GCA000012185_00714_gene;locus_tag=GCA000012185_00714;gene=abgA
contig_1	Pyrodigal	CDS	699203	700474	.	+	0	ID=GCA000012185_00714;Name=p-aminobenzoyl-glutamate hydrolase subunit A-like protein;locus_tag=GCA000012185_00714;product=p-aminobenzoyl-glutamate hydrolase subunit A-like protein;Dbxref=GO:0005737,GO:0016805,GO:0046657,GO:0071713;gene=abgA;Parent=GCA000012185_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,KEGG:K12940,RefSeq:WP_011272127.1,SO:0001217,UniParc:UPI000053E0FF,UniRef:UniRef100_Q4QMU3,UniRef:UniRef50_P44765,UniRef:UniRef90_P44765;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	700567	702540	.	+	.	ID=GCA000012185_00715_gene;locus_tag=GCA000012185_00715;gene=cpdB
contig_1	Pyrodigal	CDS	700567	702540	.	+	0	ID=GCA000012185_00715;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA000012185_00715;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;Dbxref=GO:0008663,GO:0009117;gene=cpdB;Parent=GCA000012185_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_011272128.1,SO:0001217,UniParc:UPI000053E100,UniRef:UniRef100_Q4QMU2,UniRef:UniRef50_P08331,UniRef:UniRef90_A0A5D0EMT5;ec_number=3.1.4.16
contig_1	Pyrodigal	gene	702649	703041	.	-	.	ID=GCA000012185_00716_gene;locus_tag=GCA000012185_00716;gene=zntR
contig_1	Pyrodigal	CDS	702649	703041	.	-	0	ID=GCA000012185_00716;Name=HTH-type transcriptional regulator ZntR;locus_tag=GCA000012185_00716;product=HTH-type transcriptional regulator ZntR;gene=zntR;Parent=GCA000012185_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005644187.1,SO:0001217,UniParc:UPI00014F786F,UniRef:UniRef100_Q4QMU1,UniRef:UniRef50_A0A448MTQ3,UniRef:UniRef90_A0A3E1QF04
contig_1	Pyrodigal	gene	703066	703743	.	-	.	ID=GCA000012185_00717_gene;locus_tag=GCA000012185_00717;gene=zitB
contig_1	Pyrodigal	CDS	703066	703743	.	-	0	ID=GCA000012185_00717;Name=Zinc transporter ZitB;locus_tag=GCA000012185_00717;product=Zinc transporter ZitB;gene=zitB;Parent=GCA000012185_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005657907.1,SO:0001217,UniParc:UPI000053E102,UniRef:UniRef100_A0A0H3PCK4,UniRef:UniRef50_A0A377I080,UniRef:UniRef90_A0A377I080
contig_1	BLAST+	rep_origin	703747	704250	.	?	.	ID=JPLKGDNPJF_1949;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	704251	706140	.	+	.	ID=GCA000012185_00718_gene;locus_tag=GCA000012185_00718;gene=mnmG
contig_1	Pyrodigal	CDS	704251	706140	.	+	0	ID=GCA000012185_00718;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA000012185_00718;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA000012185_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03495,RefSeq:WP_011272130.1,SO:0001217,UniParc:UPI000053E103,UniRef:UniRef100_Q4QMT9,UniRef:UniRef50_P0A6U3,UniRef:UniRef90_Q4QMT9
contig_1	BLAST+	rep_origin	704737	706139	.	?	.	ID=JPLKGDNPJF_1950;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	706322	706696	.	+	.	ID=GCA000012185_00719_gene;locus_tag=GCA000012185_00719;gene=rpsL
contig_1	Pyrodigal	CDS	706322	706696	.	+	0	ID=GCA000012185_00719;Name=30S ribosomal protein S12;locus_tag=GCA000012185_00719;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0015935,GO:0019843,GO:0046677;gene=rpsL;Parent=GCA000012185_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,RefSeq:WP_005543325.1,SO:0001217,UniParc:UPI00001685B5,UniRef:UniRef100_P63196,UniRef:UniRef50_P0A7S3,UniRef:UniRef90_P63196
contig_1	Pyrodigal	gene	706853	707323	.	+	.	ID=GCA000012185_00720_gene;locus_tag=GCA000012185_00720;gene=rpsG
contig_1	Pyrodigal	CDS	706853	707323	.	+	0	ID=GCA000012185_00720;Name=30S ribosomal protein S7;locus_tag=GCA000012185_00720;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000012185_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_005626581.1,SO:0001217,UniParc:UPI00001685B4,UniRef:UniRef100_P44376,UniRef:UniRef50_P0A2B3,UniRef:UniRef90_P44376
contig_1	Pyrodigal	gene	707407	709509	.	+	.	ID=GCA000012185_00721_gene;locus_tag=GCA000012185_00721;gene=fusA
contig_1	Pyrodigal	CDS	707407	709509	.	+	0	ID=GCA000012185_00721;Name=elongation factor G;locus_tag=GCA000012185_00721;product=elongation factor G;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790,GO:0097216;gene=fusA;Parent=GCA000012185_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_011272131.1,SO:0001217,UniParc:UPI000053E104,UniRef:UniRef100_Q4QMT6,UniRef:UniRef50_P43925,UniRef:UniRef90_P43925
contig_1	Pyrodigal	gene	709574	710758	.	+	.	ID=GCA000012185_00722_gene;locus_tag=GCA000012185_00722;gene=tuf
contig_1	Pyrodigal	CDS	709574	710758	.	+	0	ID=GCA000012185_00722;Name=elongation factor Tu;locus_tag=GCA000012185_00722;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414,GO:0097216;gene=tuf;Parent=GCA000012185_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_005667564.1,SO:0001217,UniParc:UPI00001685B2,UniRef:UniRef100_P43926,UniRef:UniRef50_P43926,UniRef:UniRef90_P43926
contig_1	Pyrodigal	gene	711275	711562	.	+	.	ID=GCA000012185_00723_gene;locus_tag=GCA000012185_00723
contig_1	Pyrodigal	CDS	711275	711562	.	+	0	ID=GCA000012185_00723;Name=NADH2 dehydrogenase%2C subunit 2;locus_tag=GCA000012185_00723;product=NADH2 dehydrogenase%2C subunit 2;Parent=GCA000012185_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_229380874.1,SO:0001217,UniParc:UPI000039A975,UniRef:UniRef100_A0A2S9S9J8,UniRef:UniRef50_A0A7G2K1T8,UniRef:UniRef90_A0A7G2K1T8
contig_1	Pyrodigal	gene	711559	711735	.	+	.	ID=GCA000012185_00724_gene;locus_tag=GCA000012185_00724
contig_1	Pyrodigal	CDS	711559	711735	.	+	0	ID=GCA000012185_00724;Name=Pantothenate kinase;locus_tag=GCA000012185_00724;product=Pantothenate kinase;Parent=GCA000012185_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688121.1,SO:0001217,UniParc:UPI000039A976,UniRef:UniRef100_Q4QMT3,UniRef:UniRef50_A0A0H3PK05,UniRef:UniRef90_A0A0H3PK05
contig_1	Pyrodigal	gene	711738	712721	.	+	.	ID=GCA000012185_00725_gene;locus_tag=GCA000012185_00725;gene=dusA
contig_1	Pyrodigal	CDS	711738	712721	.	+	0	ID=GCA000012185_00725;Name=tRNA dihydrouridine(20/20a) synthase DusA;locus_tag=GCA000012185_00725;product=tRNA dihydrouridine(20/20a) synthase DusA;Dbxref=GO:0000049,GO:0002943,GO:0010181,GO:0017150,GO:0050660,GO:0102264,GO:0102266;gene=dusA;Parent=GCA000012185_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,KEGG:K05539,RefSeq:WP_011272134.1,SO:0001217,UniParc:UPI00003CD6DA,UniRef:UniRef100_A0AAJ8WB10,UniRef:UniRef50_P44794,UniRef:UniRef90_P44794;ec_number=1.3.1.91
contig_1	Pyrodigal	gene	712769	713059	.	-	.	ID=GCA000012185_00726_gene;locus_tag=GCA000012185_00726;gene=yfcZ
contig_1	Pyrodigal	CDS	712769	713059	.	-	0	ID=GCA000012185_00726;Name=UPF0381 protein HI_0636;locus_tag=GCA000012185_00726;product=UPF0381 protein HI_0636;Dbxref=GO:0005829;gene=yfcZ;Parent=GCA000012185_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3691,COG:S,RefSeq:WP_011272135.1,SO:0001217,UniParc:UPI00003CD6DB,UniRef:UniRef100_Q4QMT1,UniRef:UniRef50_P44027,UniRef:UniRef90_P44027
contig_1	Pyrodigal	gene	713082	714086	.	-	.	ID=GCA000012185_00727_gene;locus_tag=GCA000012185_00727;gene=trpS
contig_1	Pyrodigal	CDS	713082	714086	.	-	0	ID=GCA000012185_00727;Name=tryptophan--tRNA ligase;locus_tag=GCA000012185_00727;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0006436;gene=trpS;Parent=GCA000012185_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0180,COG:J,RefSeq:WP_005658702.1,SO:0001217,UniParc:UPI00003CD6DC,UniRef:UniRef100_Q4QMT0,UniRef:UniRef50_P00954,UniRef:UniRef90_P43835;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	714215	714832	.	+	.	ID=GCA000012185_00728_gene;locus_tag=GCA000012185_00728;gene=hflD
contig_1	Pyrodigal	CDS	714215	714832	.	+	0	ID=GCA000012185_00728;Name=high frequency lysogenization protein HflD;locus_tag=GCA000012185_00728;product=high frequency lysogenization protein HflD;Dbxref=GO:0005737,GO:0005886;gene=hflD;Parent=GCA000012185_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2915,COG:XT,KEGG:K07153,RefSeq:WP_005658704.1,SO:0001217,UniParc:UPI00003CD6DD,UniRef:UniRef100_Q4QMS9,UniRef:UniRef50_P25746,UniRef:UniRef90_P44796
contig_1	Pyrodigal	gene	714855	716225	.	+	.	ID=GCA000012185_00729_gene;locus_tag=GCA000012185_00729;gene=purB
contig_1	Pyrodigal	CDS	714855	716225	.	+	0	ID=GCA000012185_00729;Name=adenylosuccinate lyase;locus_tag=GCA000012185_00729;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0005829,GO:0006188,GO:0006189,GO:0009152,GO:0044208,GO:0070626;gene=purB;Parent=GCA000012185_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_011272137.1,SO:0001217,UniParc:UPI000053E107,UniRef:UniRef100_A0AAJ8WAZ7,UniRef:UniRef50_P44797,UniRef:UniRef90_P44797;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	716497	716988	.	+	.	ID=GCA000012185_00730_gene;locus_tag=GCA000012185_00730;gene=rplJ
contig_1	Pyrodigal	CDS	716497	716988	.	+	0	ID=GCA000012185_00730;Name=50S ribosomal protein L10;locus_tag=GCA000012185_00730;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplJ;Parent=GCA000012185_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_011272138.1,SO:0001217,UniParc:UPI00003CD6E0,UniRef:UniRef100_Q4QMS7,UniRef:UniRef50_P44350,UniRef:UniRef90_P44350
contig_1	Pyrodigal	gene	717043	717414	.	+	.	ID=GCA000012185_00731_gene;locus_tag=GCA000012185_00731;gene=rplL
contig_1	Pyrodigal	CDS	717043	717414	.	+	0	ID=GCA000012185_00731;Name=50S ribosomal protein L7/L12;locus_tag=GCA000012185_00731;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA000012185_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_005650892.1,SO:0001217,UniParc:UPI00001685BA,UniRef:UniRef100_P44348,UniRef:UniRef50_Q8ETZ0,UniRef:UniRef90_P44348
contig_1	Pyrodigal	gene	717573	718943	.	+	.	ID=GCA000012185_00732_gene;locus_tag=GCA000012185_00732;gene=glmU
contig_1	Pyrodigal	CDS	717573	718943	.	+	0	ID=GCA000012185_00732;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA000012185_00732;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0005737,GO:0006048,GO:0008360,GO:0009245,GO:0009252,GO:0016020,GO:0019134,GO:0071555;gene=glmU;Parent=GCA000012185_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1207,COG:M,KEGG:K04042,RefSeq:WP_011272139.1,SO:0001217,UniParc:UPI00003CD6E1,UniRef:UniRef100_Q4QMS5,UniRef:UniRef50_P0ACC7,UniRef:UniRef90_P43889;ec_number=2.7.7.23
contig_1	Pyrodigal	gene	718978	719289	.	-	.	ID=GCA000012185_00733_gene;locus_tag=GCA000012185_00733
contig_1	Pyrodigal	CDS	718978	719289	.	-	0	ID=GCA000012185_00733;Name=Aspartate-semialdehyde dehydrogenase;locus_tag=GCA000012185_00733;product=Aspartate-semialdehyde dehydrogenase;Parent=GCA000012185_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005665148.1,SO:0001217,UniParc:UPI00003CD6E2,UniRef:UniRef100_A0A2S9RK53,UniRef:UniRef50_A0A1B8QY48,UniRef:UniRef90_A5UHD4
contig_1	tRNAscan-SE	gene	719385	719461	.	-	.	ID=GCA000012185_00734_gene;locus_tag=GCA000012185_00734;gene=trnR
contig_1	tRNAscan-SE	tRNA	719385	719461	.	-	.	ID=GCA000012185_00734;Name=tRNA-Arg(acg);locus_tag=GCA000012185_00734;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000012185_00734_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	719519	719595	.	-	.	ID=GCA000012185_00735_gene;locus_tag=GCA000012185_00735;gene=trnR
contig_1	tRNAscan-SE	tRNA	719519	719595	.	-	.	ID=GCA000012185_00735;Name=tRNA-Arg(acg);locus_tag=GCA000012185_00735;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000012185_00735_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	719616	719709	.	-	.	ID=GCA000012185_00736_gene;locus_tag=GCA000012185_00736;gene=trnS
contig_1	tRNAscan-SE	tRNA	719616	719709	.	-	.	ID=GCA000012185_00736;Name=tRNA-Ser(gct);locus_tag=GCA000012185_00736;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000012185_00736_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	719828	720763	.	-	.	ID=GCA000012185_00737_gene;locus_tag=GCA000012185_00737;gene=pldB
contig_1	Pyrodigal	CDS	719828	720763	.	-	0	ID=GCA000012185_00737;Name=putative lysophospholipase L2;locus_tag=GCA000012185_00737;product=putative lysophospholipase L2;Dbxref=GO:0004622,GO:0005886,GO:0006629,GO:0016020;gene=pldB;Parent=GCA000012185_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_011272140.1,SO:0001217,UniParc:UPI00003CD6E3,UniRef:UniRef100_A0AAJ8WR38,UniRef:UniRef50_P44800,UniRef:UniRef90_P44800;ec_number=3.1.1.5
contig_1	Pyrodigal	gene	720817	721932	.	-	.	ID=GCA000012185_00738_gene;locus_tag=GCA000012185_00738;gene=asd
contig_1	Pyrodigal	CDS	720817	721932	.	-	0	ID=GCA000012185_00738;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000012185_00738;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0050661;gene=asd;Parent=GCA000012185_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_011272141.1,SO:0001217,UniParc:UPI00003CD6E4,UniRef:UniRef100_A0AAJ8WQY6,UniRef:UniRef50_P44801,UniRef:UniRef90_W0Q3F6;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	722098	722814	.	-	.	ID=GCA000012185_00739_gene;locus_tag=GCA000012185_00739;gene=sapB
contig_1	Pyrodigal	CDS	722098	722814	.	-	0	ID=GCA000012185_00739;Name=putative protein HI_0647;locus_tag=GCA000012185_00739;product=putative protein HI_0647;Dbxref=GO:0005886;gene=sapB;Parent=GCA000012185_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1285,COG:P,KEGG:K07507,RefSeq:WP_005654516.1,SO:0001217,UniParc:UPI0000139B79,UniRef:UniRef100_Q57424,UniRef:UniRef50_Q57424,UniRef:UniRef90_Q57424
contig_1	Pyrodigal	gene	723045	723662	.	+	.	ID=GCA000012185_00740_gene;locus_tag=GCA000012185_00740
contig_1	Pyrodigal	CDS	723045	723662	.	+	0	ID=GCA000012185_00740;Name=putative 2-methylthioadenine synthetase;locus_tag=GCA000012185_00740;product=putative 2-methylthioadenine synthetase;Parent=GCA000012185_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A4P7KYG8,UniRef:UniRef90_A5UHD9
contig_1	Pyrodigal	gene	723726	724304	.	-	.	ID=GCA000012185_00741_gene;locus_tag=GCA000012185_00741;gene=mdaB
contig_1	Pyrodigal	CDS	723726	724304	.	-	0	ID=GCA000012185_00741;Name=NAD(P)H-dependent oxidoreductase;locus_tag=GCA000012185_00741;product=NAD(P)H-dependent oxidoreductase;gene=mdaB;Parent=GCA000012185_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2249,COG:R,RefSeq:WP_011272143.1,SO:0001217,UniParc:UPI000053E109,UniRef:UniRef100_A0AAJ8WQP5,UniRef:UniRef50_P44803,UniRef:UniRef90_A0A9X7F2R8
contig_1	Pyrodigal	gene	724583	726595	.	-	.	ID=GCA000012185_00742_gene;locus_tag=GCA000012185_00742;gene=rep
contig_1	Pyrodigal	CDS	724583	726595	.	-	0	ID=GCA000012185_00742;Name=DNA helicase Rep;locus_tag=GCA000012185_00742;product=DNA helicase Rep;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0003697,GO:0005524,GO:0005829,GO:0006268,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=rep;Parent=GCA000012185_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,KEGG:K03656,RefSeq:WP_011272144.1,SO:0001217,UniParc:UPI00003CD6E8,UniRef:UniRef100_A0AAJ8WQU8,UniRef:UniRef50_P09980,UniRef:UniRef90_P44804;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	726601	726813	.	-	.	ID=GCA000012185_00743_gene;locus_tag=GCA000012185_00743;gene=yceK
contig_1	Pyrodigal	CDS	726601	726813	.	-	0	ID=GCA000012185_00743;Name=putative protein HI_0650;locus_tag=GCA000012185_00743;product=putative protein HI_0650;Dbxref=GO:0005886;gene=yceK;Parent=GCA000012185_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5645,COG:S,RefSeq:WP_005654525.1,SO:0001217,UniParc:UPI00003CD6E9,UniRef:UniRef100_A0A0C5F7S3,UniRef:UniRef50_P44028,UniRef:UniRef90_P44028
contig_1	Pyrodigal	gene	726810	727280	.	-	.	ID=GCA000012185_00744_gene;locus_tag=GCA000012185_00744;gene=coaD
contig_1	Pyrodigal	CDS	726810	727280	.	-	0	ID=GCA000012185_00744;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000012185_00744;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000012185_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_011272145.1,SO:0001217,UniParc:UPI00003CD6EA,UniRef:UniRef100_Q4QMR6,UniRef:UniRef50_P44805,UniRef:UniRef90_P44805;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	727277	728560	.	-	.	ID=GCA000012185_00745_gene;locus_tag=GCA000012185_00745;gene=kdtA
contig_1	Pyrodigal	CDS	727277	728560	.	-	0	ID=GCA000012185_00745;Name=3-deoxy-d-manno-octulosonic-acid transferase;locus_tag=GCA000012185_00745;product=3-deoxy-d-manno-octulosonic-acid transferase;Dbxref=GO:0005886,GO:0009244,GO:0009245,GO:0016740,GO:0043842;gene=kdtA;Parent=GCA000012185_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1519,COG:M,KEGG:K02527,RefSeq:WP_011272146.1,SO:0001217,UniParc:UPI00003CD6EB,UniRef:UniRef100_A0AAJ8WB25,UniRef:UniRef50_P44806,UniRef:UniRef90_P44806,VFDB:VFC0258,VFDB:VFG000330;ec_number=2.4.99.12
contig_1	Pyrodigal	gene	728623	729387	.	+	.	ID=GCA000012185_00746_gene;locus_tag=GCA000012185_00746;gene=lgtF
contig_1	Pyrodigal	CDS	728623	729387	.	+	0	ID=GCA000012185_00746;Name=beta-1%2C4-glucosyltransferase;locus_tag=GCA000012185_00746;product=beta-1%2C4-glucosyltransferase;Dbxref=GO:0016757;gene=lgtF;Parent=GCA000012185_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,KEGG:K12984,RefSeq:WP_011272147.1,SO:0001217,UniParc:UPI00003CD6EC,UniRef:UniRef100_A0A2S9S9K9,UniRef:UniRef50_P44029,UniRef:UniRef90_P44029,VFDB:VFC0258,VFDB:VFG013315;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	729384	729947	.	-	.	ID=GCA000012185_00747_gene;locus_tag=GCA000012185_00747;gene=tag
contig_1	Pyrodigal	CDS	729384	729947	.	-	0	ID=GCA000012185_00747;Name=DNA-3-methyladenine glycosylase;locus_tag=GCA000012185_00747;product=DNA-3-methyladenine glycosylase;Dbxref=GO:0006284,GO:0008725,GO:0046872;gene=tag;Parent=GCA000012185_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2818,COG:L,KEGG:K01246,RefSeq:WP_011272148.1,SO:0001217,UniParc:UPI00003CD6ED,UniRef:UniRef100_A0A2S9S9K7,UniRef:UniRef50_P05100,UniRef:UniRef90_P44321;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	730062	730814	.	-	.	ID=GCA000012185_00748_gene;locus_tag=GCA000012185_00748
contig_1	Pyrodigal	CDS	730062	730814	.	-	0	ID=GCA000012185_00748;Name=3-deoxy-D-manno-octulosonic-acid transferase;locus_tag=GCA000012185_00748;product=3-deoxy-D-manno-octulosonic-acid transferase;Parent=GCA000012185_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272149.1,SO:0001217,UniParc:UPI00003CD6EE,UniRef:UniRef100_A0AAJ8WAY9,UniRef:UniRef50_A0A084IPL4,UniRef:UniRef90_A5UHE7
contig_1	Pyrodigal	gene	730826	731632	.	-	.	ID=GCA000012185_00749_gene;locus_tag=GCA000012185_00749;gene=aroE
contig_1	Pyrodigal	CDS	730826	731632	.	-	0	ID=GCA000012185_00749;Name=shikimate dehydrogenase;locus_tag=GCA000012185_00749;product=shikimate dehydrogenase;Dbxref=GO:0004764,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0050661;gene=aroE;Parent=GCA000012185_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_011272150.1,SO:0001217,UniParc:UPI00003CD6EF,UniRef:UniRef100_Q4QMR1,UniRef:UniRef50_P43876,UniRef:UniRef90_P43876;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	731636	732187	.	-	.	ID=GCA000012185_00750_gene;locus_tag=GCA000012185_00750;gene=tsaC
contig_1	Pyrodigal	CDS	731636	732187	.	-	0	ID=GCA000012185_00750;Name=Threonylcarbamoyl-AMP synthase;locus_tag=GCA000012185_00750;product=Threonylcarbamoyl-AMP synthase;Dbxref=GO:0000049,GO:0002949,GO:0003725,GO:0005524,GO:0005737,GO:0006450,GO:0016779,GO:0061710;gene=tsaC;Parent=GCA000012185_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_011272151.1,SO:0001217,UniParc:UPI00003CD6F0,UniRef:UniRef100_Q4QMR0,UniRef:UniRef50_Q87KE2,UniRef:UniRef90_P44807;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	732203	732739	.	-	.	ID=GCA000012185_00751_gene;locus_tag=GCA000012185_00751;gene=yrdD
contig_1	Pyrodigal	CDS	732203	732739	.	-	0	ID=GCA000012185_00751;Name=putative protein HI_0656-1;locus_tag=GCA000012185_00751;product=putative protein HI_0656-1;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0006265;gene=yrdD;Parent=GCA000012185_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_011272152.1,SO:0001217,UniParc:UPI00003CD6F1,UniRef:UniRef100_A0A2S9S9L9,UniRef:UniRef50_P46494,UniRef:UniRef90_P46494
contig_1	Pyrodigal	gene	732749	734665	.	-	.	ID=GCA000012185_00752_gene;locus_tag=GCA000012185_00752;gene=yheS
contig_1	Pyrodigal	CDS	732749	734665	.	-	0	ID=GCA000012185_00752;Name=ABC transporter ATP-binding protein;locus_tag=GCA000012185_00752;product=ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0016887;gene=yheS;Parent=GCA000012185_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_011272153.1,SO:0001217,UniParc:UPI000053E10A,UniRef:UniRef100_Q4QMQ8,UniRef:UniRef50_A0A0H2VBH0,UniRef:UniRef90_P44808
contig_1	Pyrodigal	gene	734850	735146	.	-	.	ID=GCA000012185_00753_gene;locus_tag=GCA000012185_00753;gene=aF2118
contig_1	Pyrodigal	CDS	734850	735146	.	-	0	ID=GCA000012185_00753;Name=putative HTH-type transcriptional regulator HI_0659;locus_tag=GCA000012185_00753;product=putative HTH-type transcriptional regulator HI_0659;Dbxref=GO:0003677;gene=aF2118;Parent=GCA000012185_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3620,COG:K,RefSeq:WP_005650837.1,SO:0001217,UniParc:UPI0000139B8E,UniRef:UniRef100_P44030,UniRef:UniRef50_P44030,UniRef:UniRef90_P44030
contig_1	Pyrodigal	gene	735139	735321	.	-	.	ID=GCA000012185_00754_gene;locus_tag=GCA000012185_00754;gene=tad
contig_1	Pyrodigal	CDS	735139	735321	.	-	0	ID=GCA000012185_00754;Name=Phage-related protein gp49%2C toxin component of the Tad-Ata toxin-antitoxin system;locus_tag=GCA000012185_00754;product=Phage-related protein gp49%2C toxin component of the Tad-Ata toxin-antitoxin system;gene=tad;Parent=GCA000012185_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4679,COG:VX,RefSeq:WP_005661452.1,SO:0001217,UniParc:UPI00003CD8E4,UniRef:UniRef100_Q4QMQ6,UniRef:UniRef50_A0A0D0IFF5,UniRef:UniRef90_A0A0D0IFF5
contig_1	Pyrodigal	gene	735591	738557	.	-	.	ID=GCA000012185_00755_gene;locus_tag=GCA000012185_00755
contig_1	Pyrodigal	CDS	735591	738557	.	-	0	ID=GCA000012185_00755;Name=Hemoglobin-haptoglobin binding protein B;locus_tag=GCA000012185_00755;product=Hemoglobin-haptoglobin binding protein B;Parent=GCA000012185_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_041174743.1,SO:0001217,UniParc:UPI0002FDC2C9,UniRef:UniRef100_Q4QMQ5,UniRef:UniRef50_Q57408,UniRef:UniRef90_Q4QMQ5
contig_1	Pyrodigal	gene	738866	739030	.	+	.	ID=GCA000012185_00756_gene;locus_tag=GCA000012185_00756
contig_1	Pyrodigal	CDS	738866	739030	.	+	0	ID=GCA000012185_00756;Name=ABC transporter permease;locus_tag=GCA000012185_00756;product=ABC transporter permease;Parent=GCA000012185_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054638.1,SO:0001217,UniParc:UPI0001545AC9,UniRef:UniRef100_UPI0001545AC9,UniRef:UniRef50_A5UHC6,UniRef:UniRef90_A5UHC6
contig_1	Pyrodigal	gene	739083	739247	.	+	.	ID=GCA000012185_00757_gene;locus_tag=GCA000012185_00757
contig_1	Pyrodigal	CDS	739083	739247	.	+	0	ID=GCA000012185_00757;Name=ABC transporter;locus_tag=GCA000012185_00757;product=ABC transporter;Parent=GCA000012185_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A5UHC6,UniRef:UniRef90_UPI0023DE0908
contig_1	Pyrodigal	gene	739300	741045	.	+	.	ID=GCA000012185_00758_gene;locus_tag=GCA000012185_00758;gene=cydD
contig_1	Pyrodigal	CDS	739300	741045	.	+	0	ID=GCA000012185_00758;Name=putative ABC transporter ATP-binding protein HI_0663;locus_tag=GCA000012185_00758;product=putative ABC transporter ATP-binding protein HI_0663;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016887;gene=cydD;Parent=GCA000012185_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_011272155.1,SO:0001217,UniParc:UPI000053E10C,UniRef:UniRef100_Q4QMQ4,UniRef:UniRef50_P71355,UniRef:UniRef90_P71355
contig_1	Pyrodigal	gene	741038	742696	.	+	.	ID=GCA000012185_00759_gene;locus_tag=GCA000012185_00759;gene=cydC
contig_1	Pyrodigal	CDS	741038	742696	.	+	0	ID=GCA000012185_00759;Name=thiol reductant ABC exporter subunit CydC;locus_tag=GCA000012185_00759;product=thiol reductant ABC exporter subunit CydC;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0033228,GO:0033230,GO:0034775,GO:0042626,GO:0045454,GO:0050456,GO:0055051,GO:0140359;gene=cydC;Parent=GCA000012185_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_011272156.1,SO:0001217,UniParc:UPI000053E10D,UniRef:UniRef100_Q4QMQ3,UniRef:UniRef50_Q57538,UniRef:UniRef90_Q57538
contig_1	Pyrodigal	gene	742780	743811	.	-	.	ID=GCA000012185_00760_gene;locus_tag=GCA000012185_00760
contig_1	Pyrodigal	CDS	742780	743811	.	-	0	ID=GCA000012185_00760;Name=Putative kinase HI_0665;locus_tag=GCA000012185_00760;product=Putative kinase HI_0665;Dbxref=GO:0004674,GO:0005829;Parent=GCA000012185_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07154,RefSeq:WP_011272157.1,SO:0001217,UniParc:UPI000053E10E,UniRef:UniRef100_Q4QMQ2,UniRef:UniRef50_P44033,UniRef:UniRef90_P44033;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	743808	744128	.	-	.	ID=GCA000012185_00761_gene;locus_tag=GCA000012185_00761
contig_1	Pyrodigal	CDS	743808	744128	.	-	0	ID=GCA000012185_00761;Name=putative protein HI_0666;locus_tag=GCA000012185_00761;product=putative protein HI_0666;Parent=GCA000012185_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07154,RefSeq:WP_011272158.1,SO:0001217,UniParc:UPI00003CD7DD,UniRef:UniRef100_A0A0K9KYW1,UniRef:UniRef50_P44034,UniRef:UniRef90_P44034;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	744116	744424	.	-	.	ID=GCA000012185_00762_gene;locus_tag=GCA000012185_00762
contig_1	Pyrodigal	CDS	744116	744424	.	-	0	ID=GCA000012185_00762;Name=putative HTH-type transcriptional regulator HI_0666-1;locus_tag=GCA000012185_00762;product=putative HTH-type transcriptional regulator HI_0666-1;Dbxref=GO:0003677;Parent=GCA000012185_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272159.1,SO:0001217,UniParc:UPI00003CD7DC,UniRef:UniRef100_Q4QMQ0,UniRef:UniRef50_O86228,UniRef:UniRef90_O86228
contig_1	Pyrodigal	gene	744629	745630	.	-	.	ID=GCA000012185_00763_gene;locus_tag=GCA000012185_00763;gene=glpX
contig_1	Pyrodigal	CDS	744629	745630	.	-	0	ID=GCA000012185_00763;Name=class II fructose-bisphosphatase;locus_tag=GCA000012185_00763;product=class II fructose-bisphosphatase;Dbxref=GO:0006071,GO:0006094,GO:0042132;gene=glpX;Parent=GCA000012185_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02446,RefSeq:WP_011272160.1,SO:0001217,UniParc:UPI00003CD7DB,UniRef:UniRef100_A0AAJ8WAX9,UniRef:UniRef50_P0A9C9,UniRef:UniRef90_A0AAJ8WAX9;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	745792	746010	.	+	.	ID=GCA000012185_00764_gene;locus_tag=GCA000012185_00764;gene=zapB
contig_1	Pyrodigal	CDS	745792	746010	.	+	0	ID=GCA000012185_00764;Name=Cell division protein ZapB;locus_tag=GCA000012185_00764;product=Cell division protein ZapB;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=zapB;Parent=GCA000012185_00764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3074,COG:D,RefSeq:WP_005650820.1,SO:0001217,UniParc:UPI000013B41C,UniRef:UniRef100_P44812,UniRef:UniRef50_Q9CKW8,UniRef:UniRef90_P44812
contig_1	Pyrodigal	gene	746109	746549	.	+	.	ID=GCA000012185_00765_gene;locus_tag=GCA000012185_00765;gene=mioC
contig_1	Pyrodigal	CDS	746109	746549	.	+	0	ID=GCA000012185_00765;Name=FMN-binding protein MioC;locus_tag=GCA000012185_00765;product=FMN-binding protein MioC;Dbxref=GO:0010181;gene=mioC;Parent=GCA000012185_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_005667635.1,SO:0001217,UniParc:UPI00003CD7DA,UniRef:UniRef100_A5UHF8,UniRef:UniRef50_Q9L6A2,UniRef:UniRef90_P44813
contig_1	Pyrodigal	gene	746546	746980	.	+	.	ID=GCA000012185_00766_gene;locus_tag=GCA000012185_00766;gene=dtd
contig_1	Pyrodigal	CDS	746546	746980	.	+	0	ID=GCA000012185_00766;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000012185_00766;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0006399,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000012185_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_005650818.1,SO:0001217,UniParc:UPI000039A99A,UniRef:UniRef100_Q4QMP6,UniRef:UniRef50_P44814,UniRef:UniRef90_P44814;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	747287	747763	.	-	.	ID=GCA000012185_00767_gene;locus_tag=GCA000012185_00767;gene=ispF
contig_1	Pyrodigal	CDS	747287	747763	.	-	0	ID=GCA000012185_00767;Name=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;locus_tag=GCA000012185_00767;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;Dbxref=GO:0008685,GO:0016114,GO:0019288,GO:0046872;gene=ispF;Parent=GCA000012185_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0245,COG:I,RefSeq:WP_006995249.1,SO:0001217,UniParc:UPI00003CD7D9,UniRef:UniRef100_Q4QMP5,UniRef:UniRef50_P62617,UniRef:UniRef90_P44815;ec_number=4.6.1.12
contig_1	Pyrodigal	gene	747760	748437	.	-	.	ID=GCA000012185_00768_gene;locus_tag=GCA000012185_00768;gene=ispD
contig_1	Pyrodigal	CDS	747760	748437	.	-	0	ID=GCA000012185_00768;Name=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;locus_tag=GCA000012185_00768;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;Dbxref=GO:0019288,GO:0050518;gene=ispD;Parent=GCA000012185_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_011272161.1,SO:0001217,UniParc:UPI00003CD7D8,UniRef:UniRef100_Q4QMP4,UniRef:UniRef50_B4RZG5,UniRef:UniRef90_O05029;ec_number=2.7.7.60
contig_1	Pyrodigal	gene	748437	748715	.	-	.	ID=GCA000012185_00769_gene;locus_tag=GCA000012185_00769;gene=ftsB
contig_1	Pyrodigal	CDS	748437	748715	.	-	0	ID=GCA000012185_00769;Name=cell division protein FtsB;locus_tag=GCA000012185_00769;product=cell division protein FtsB;Dbxref=GO:0005886,GO:0030428,GO:0032153,GO:0043093;gene=ftsB;Parent=GCA000012185_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2919,COG:D,KEGG:K05589,RefSeq:WP_005661211.1,SO:0001217,UniParc:UPI000012ACB8,UniRef:UniRef100_P44035,UniRef:UniRef50_P44035,UniRef:UniRef90_P44035
contig_1	Pyrodigal	gene	748838	749305	.	-	.	ID=GCA000012185_00770_gene;locus_tag=GCA000012185_00770;gene=gpt
contig_1	Pyrodigal	CDS	748838	749305	.	-	0	ID=GCA000012185_00770;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000012185_00770;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000287,GO:0000310,GO:0004422,GO:0005829,GO:0005886,GO:0006166,GO:0009116,GO:0032263,GO:0032264,GO:0032265,GO:0052657;gene=gpt;Parent=GCA000012185_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00769,RefSeq:WP_005650775.1,SO:0001217,UniParc:UPI0000138FF9,UniRef:UniRef100_P43859,UniRef:UniRef50_P0A9M5,UniRef:UniRef90_P43859;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	749416	750870	.	+	.	ID=GCA000012185_00771_gene;locus_tag=GCA000012185_00771;gene=pepD
contig_1	Pyrodigal	CDS	749416	750870	.	+	0	ID=GCA000012185_00771;Name=Cytosol non-specific dipeptidase;locus_tag=GCA000012185_00771;product=Cytosol non-specific dipeptidase;Dbxref=GO:0005829,GO:0006508,GO:0046872,GO:0070573;gene=pepD;Parent=GCA000012185_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01270,RefSeq:WP_011272162.1,SO:0001217,UniParc:UPI000053E10F,UniRef:UniRef100_A0A2S9S9R8,UniRef:UniRef50_P44817,UniRef:UniRef90_P44817;ec_number=3.4.13.18
contig_1	Pyrodigal	gene	750923	751810	.	-	.	ID=GCA000012185_00772_gene;locus_tag=GCA000012185_00772;gene=xerC
contig_1	Pyrodigal	CDS	750923	751810	.	-	0	ID=GCA000012185_00772;Name=tyrosine recombinase XerC;locus_tag=GCA000012185_00772;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009037,GO:0015074,GO:0051301;gene=xerC;Parent=GCA000012185_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4973,COG:L,RefSeq:WP_011272163.1,SO:0001217,UniParc:UPI000053E110,UniRef:UniRef100_Q4QMP0,UniRef:UniRef50_P0A8P6,UniRef:UniRef90_P44818
contig_1	Pyrodigal	gene	751804	752244	.	-	.	ID=GCA000012185_00773_gene;locus_tag=GCA000012185_00773
contig_1	Pyrodigal	CDS	751804	752244	.	-	0	ID=GCA000012185_00773;Name=putative acetyltransferase HI_0677;locus_tag=GCA000012185_00773;product=putative acetyltransferase HI_0677;Dbxref=GO:0016747;Parent=GCA000012185_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005655034.1,SO:0001217,UniParc:UPI0000139BBD,UniRef:UniRef100_P44036,UniRef:UniRef50_P44036,UniRef:UniRef90_P44036
contig_1	Pyrodigal	gene	752410	753201	.	+	.	ID=GCA000012185_00774_gene;locus_tag=GCA000012185_00774;gene=tpiA
contig_1	Pyrodigal	CDS	752410	753201	.	+	0	ID=GCA000012185_00774;Name=triose-phosphate isomerase;locus_tag=GCA000012185_00774;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000012185_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,RefSeq:WP_005650804.1,SO:0001217,UniParc:UPI000039A99E,UniRef:UniRef100_Q4QMN8,UniRef:UniRef50_P0A858,UniRef:UniRef90_P43727;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	753283	753600	.	-	.	ID=GCA000012185_00775_gene;locus_tag=GCA000012185_00775;gene=glpE
contig_1	Pyrodigal	CDS	753283	753600	.	-	0	ID=GCA000012185_00775;Name=thiosulfate sulfurtransferase GlpE;locus_tag=GCA000012185_00775;product=thiosulfate sulfurtransferase GlpE;Dbxref=GO:0004792,GO:0005737,GO:0006071;gene=glpE;Parent=GCA000012185_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_005658417.1,SO:0001217,UniParc:UPI00003CDA9A,UniRef:UniRef100_Q4QMN7,UniRef:UniRef50_Q65QH0,UniRef:UniRef90_P44819;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	753601	754479	.	-	.	ID=GCA000012185_00776_gene;locus_tag=GCA000012185_00776;gene=rarD
contig_1	Pyrodigal	CDS	753601	754479	.	-	0	ID=GCA000012185_00776;Name=EamA family transporter RarD;locus_tag=GCA000012185_00776;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA000012185_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_011272164.1,SO:0001217,UniParc:UPI00003CDA99,UniRef:UniRef100_A0A2S9S9W8,UniRef:UniRef50_Q57389,UniRef:UniRef90_Q57389
contig_1	Pyrodigal	gene	754511	755389	.	-	.	ID=GCA000012185_00777_gene;locus_tag=GCA000012185_00777;gene=ilvY
contig_1	Pyrodigal	CDS	754511	755389	.	-	0	ID=GCA000012185_00777;Name=HTH-type transcriptional activator IlvY;locus_tag=GCA000012185_00777;product=HTH-type transcriptional activator IlvY;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0008652,GO:0009082;gene=ilvY;Parent=GCA000012185_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_011272165.1,SO:0001217,UniParc:UPI000053E111,UniRef:UniRef100_A0A2S9S9S5,UniRef:UniRef50_P44821,UniRef:UniRef90_P44821
contig_1	Pyrodigal	gene	756073	757551	.	+	.	ID=GCA000012185_00778_gene;locus_tag=GCA000012185_00778;gene=ilvC
contig_1	Pyrodigal	CDS	756073	757551	.	+	0	ID=GCA000012185_00778;Name=ketol-acid reductoisomerase;locus_tag=GCA000012185_00778;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009082,GO:0009097,GO:0009099;gene=ilvC;Parent=GCA000012185_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0059,COG:EH,KEGG:K00053,RefSeq:WP_011272166.1,SO:0001217,UniParc:UPI00003CD9DF,UniRef:UniRef100_Q4QMN4,UniRef:UniRef50_P05793,UniRef:UniRef90_P44822;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	757662	758942	.	-	.	ID=GCA000012185_00779_gene;locus_tag=GCA000012185_00779
contig_1	Pyrodigal	CDS	757662	758942	.	-	0	ID=GCA000012185_00779;Name=Anaerobic glycerol-3-phosphate dehydrogenase subunit C;locus_tag=GCA000012185_00779;product=Anaerobic glycerol-3-phosphate dehydrogenase subunit C;Parent=GCA000012185_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272167.1,SO:0001217,UniParc:UPI00003CD9E0,UniRef:UniRef100_A0AAJ8WAX8,UniRef:UniRef90_P43801
contig_1	Pyrodigal	gene	758953	760251	.	-	.	ID=GCA000012185_00780_gene;locus_tag=GCA000012185_00780;gene=glpB
contig_1	Pyrodigal	CDS	758953	760251	.	-	0	ID=GCA000012185_00780;Name=glycerol-3-phosphate dehydrogenase subunit GlpB;locus_tag=GCA000012185_00780;product=glycerol-3-phosphate dehydrogenase subunit GlpB;Dbxref=GO:0004368,GO:0005737,GO:0009331,GO:0019563;gene=glpB;Parent=GCA000012185_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3075,COG:E,KEGG:K00112,RefSeq:WP_011272168.1,SO:0001217,UniParc:UPI000053E112,UniRef:UniRef100_Q4QMN2,UniRef:UniRef50_Q9CL07,UniRef:UniRef90_P43800;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	760241	761932	.	-	.	ID=GCA000012185_00781_gene;locus_tag=GCA000012185_00781;gene=glpA
contig_1	Pyrodigal	CDS	760241	761932	.	-	0	ID=GCA000012185_00781;Name=anaerobic glycerol-3-phosphate dehydrogenase subunit A;locus_tag=GCA000012185_00781;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;Dbxref=GO:0004368,GO:0005886,GO:0006072,GO:0009331,GO:0010181,GO:0019563,GO:0046168,GO:0046174,GO:0050660;gene=glpA;Parent=GCA000012185_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_005658425.1,SO:0001217,UniParc:UPI000053E113,UniRef:UniRef100_A0A0H3PC41,UniRef:UniRef50_P0A9C0,UniRef:UniRef90_P43799;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	762225	763667	.	+	.	ID=GCA000012185_00782_gene;locus_tag=GCA000012185_00782;gene=glpT
contig_1	Pyrodigal	CDS	762225	763667	.	+	0	ID=GCA000012185_00782;Name=glycerol-3-phosphate transporter;locus_tag=GCA000012185_00782;product=glycerol-3-phosphate transporter;Dbxref=GO:0005886,GO:0006071,GO:0015169,GO:0015760,GO:0015794,GO:0016020,GO:0035435,GO:0061513;gene=glpT;Parent=GCA000012185_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_005650782.1,SO:0001217,UniParc:UPI000012B7B6,UniRef:UniRef100_P96335,UniRef:UniRef50_P37948,UniRef:UniRef90_P96335
contig_1	Pyrodigal	gene	763771	764865	.	+	.	ID=GCA000012185_00783_gene;locus_tag=GCA000012185_00783;gene=glpQ
contig_1	Pyrodigal	CDS	763771	764865	.	+	0	ID=GCA000012185_00783;Name=glycerophosphodiester phosphodiesterase;locus_tag=GCA000012185_00783;product=glycerophosphodiester phosphodiesterase;Dbxref=GO:0006071,GO:0006629,GO:0008081,GO:0008889,GO:0009279,GO:0042597,GO:0046872;gene=glpQ;Parent=GCA000012185_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_005661229.1,SO:0001217,UniParc:UPI000002D79A,UniRef:UniRef100_A0A0Y7KZX1,UniRef:UniRef50_Q06282,UniRef:UniRef90_Q06282;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	765095	765889	.	+	.	ID=GCA000012185_00784_gene;locus_tag=GCA000012185_00784;gene=glpF
contig_1	Pyrodigal	CDS	765095	765889	.	+	0	ID=GCA000012185_00784;Name=Glycerol uptake facilitator protein;locus_tag=GCA000012185_00784;product=Glycerol uptake facilitator protein;Dbxref=GO:0005886,GO:0015254,GO:0015793;gene=glpF;Parent=GCA000012185_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272169.1,SO:0001217,UniParc:UPI00003CD76E,UniRef:UniRef100_Q4QMM8,UniRef:UniRef50_P0AER0,UniRef:UniRef90_P44826
contig_1	Pyrodigal	gene	765910	767421	.	+	.	ID=GCA000012185_00785_gene;locus_tag=GCA000012185_00785;gene=glpK
contig_1	Pyrodigal	CDS	765910	767421	.	+	0	ID=GCA000012185_00785;Name=glycerol kinase GlpK;locus_tag=GCA000012185_00785;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563;gene=glpK;Parent=GCA000012185_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,KEGG:K00864,RefSeq:WP_011272170.1,SO:0001217,UniParc:UPI00003CD76F,UniRef:UniRef100_Q4QMM7,UniRef:UniRef50_O66131,UniRef:UniRef90_P44400;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	767505	767972	.	-	.	ID=GCA000012185_00786_gene;locus_tag=GCA000012185_00786;gene=gpt
contig_1	Pyrodigal	CDS	767505	767972	.	-	0	ID=GCA000012185_00786;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000012185_00786;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000287,GO:0000310,GO:0004422,GO:0005829,GO:0005886,GO:0006166,GO:0009116,GO:0032263,GO:0032264,GO:0032265,GO:0052657;gene=gpt;Parent=GCA000012185_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00769,RefSeq:WP_005632242.1,SO:0001217,UniParc:UPI000039A8AE,UniRef:UniRef100_Q4QMM6,UniRef:UniRef50_P0A9M5,UniRef:UniRef90_P43859;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	768257	769081	.	+	.	ID=GCA000012185_00787_gene;locus_tag=GCA000012185_00787;gene=hel
contig_1	Pyrodigal	CDS	768257	769081	.	+	0	ID=GCA000012185_00787;Name=lipoprotein e(P4);locus_tag=GCA000012185_00787;product=lipoprotein e(P4);Dbxref=GO:0009279;gene=hel;Parent=GCA000012185_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010869033,COG:COG2503,COG:R,RefSeq:WP_011272171.1,SO:0001217,UniParc:UPI00003CD770,UniRef:UniRef100_A0A0D6FQ88,UniRef:UniRef50_P26093,UniRef:UniRef90_P26093
contig_1	Pyrodigal	gene	769266	769931	.	+	.	ID=GCA000012185_00788_gene;locus_tag=GCA000012185_00788;gene=rluE
contig_1	Pyrodigal	CDS	769266	769931	.	+	0	ID=GCA000012185_00788;Name=Ribosomal large subunit pseudouridine synthase E;locus_tag=GCA000012185_00788;product=Ribosomal large subunit pseudouridine synthase E;Dbxref=GO:0001522,GO:0003723,GO:0006364,GO:0160137;gene=rluE;Parent=GCA000012185_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,SO:0001217,UniParc:UPI000D4BA342,UniRef:UniRef100_A0AAX3IP18,UniRef:UniRef50_Q9F855,UniRef:UniRef90_P44827;ec_number=5.4.99.20
contig_1	Pyrodigal	gene	770050	770448	.	-	.	ID=GCA000012185_00789_gene;locus_tag=GCA000012185_00789
contig_1	Pyrodigal	CDS	770050	770448	.	-	0	ID=GCA000012185_00789;Name=Exopolyphosphatase;locus_tag=GCA000012185_00789;product=Exopolyphosphatase;Parent=GCA000012185_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A4P044,UniRef:UniRef90_A4P044
contig_1	Pyrodigal	gene	770426	771028	.	-	.	ID=GCA000012185_00790_gene;locus_tag=GCA000012185_00790
contig_1	Pyrodigal	CDS	770426	771028	.	-	0	ID=GCA000012185_00790;Name=Exopolyphosphatase;locus_tag=GCA000012185_00790;product=Exopolyphosphatase;Parent=GCA000012185_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01524,SO:0001217,UniParc:UPI00003CD773,UniRef:UniRef100_A0AAJ8WAV7,UniRef:UniRef50_A0A376TV60,UniRef:UniRef90_A4P052;ec_number=3.6.1.40
contig_1	Pyrodigal	gene	771036	774920	.	-	.	ID=GCA000012185_00791_gene;locus_tag=GCA000012185_00791;gene=tamB
contig_1	Pyrodigal	CDS	771036	774920	.	-	0	ID=GCA000012185_00791;Name=Translocation and assembly module subunit TamB;locus_tag=GCA000012185_00791;product=Translocation and assembly module subunit TamB;Dbxref=GO:0005886,GO:0009306,GO:0097347;gene=tamB;Parent=GCA000012185_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2911,COG:U,RefSeq:WP_011272173.1,SO:0001217,UniParc:UPI000053E115,UniRef:UniRef100_Q4QMM3,UniRef:UniRef50_Q57523,UniRef:UniRef90_Q57523
contig_1	Pyrodigal	gene	774930	776666	.	-	.	ID=GCA000012185_00792_gene;locus_tag=GCA000012185_00792;gene=tamA
contig_1	Pyrodigal	CDS	774930	776666	.	-	0	ID=GCA000012185_00792;Name=Translocation and assembly module subunit TamA;locus_tag=GCA000012185_00792;product=Translocation and assembly module subunit TamA;Dbxref=GO:0009279,GO:0009306,GO:0097347;gene=tamA;Parent=GCA000012185_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0729,COG:M,RefSeq:WP_011272174.1,SO:0001217,UniParc:UPI000053E116,UniRef:UniRef100_Q4QMM2,UniRef:UniRef50_P44038,UniRef:UniRef90_P44038
contig_1	Pyrodigal	gene	776817	777389	.	-	.	ID=GCA000012185_00793_gene;locus_tag=GCA000012185_00793;gene=slyD
contig_1	Pyrodigal	CDS	776817	777389	.	-	0	ID=GCA000012185_00793;Name=peptidylprolyl isomerase;locus_tag=GCA000012185_00793;product=peptidylprolyl isomerase;Dbxref=GO:0003755,GO:0005737,GO:0042026,GO:0046872,GO:0140839,GO:0140840;gene=slyD;Parent=GCA000012185_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1047,COG:O,RefSeq:WP_011272175.1,SO:0001217,UniParc:UPI000053E117,UniRef:UniRef100_A0AAJ8WAV9,UniRef:UniRef50_Q9CKP2,UniRef:UniRef90_P44830;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	777467	777889	.	-	.	ID=GCA000012185_00794_gene;locus_tag=GCA000012185_00794;gene=rraB
contig_1	Pyrodigal	CDS	777467	777889	.	-	0	ID=GCA000012185_00794;Name=ribonuclease E inhibitor RraB;locus_tag=GCA000012185_00794;product=ribonuclease E inhibitor RraB;Dbxref=GO:0005737,GO:0019899,GO:0060698;gene=rraB;Parent=GCA000012185_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3076,COG:J,RefSeq:WP_011272176.1,SO:0001217,UniParc:UPI000053E118,UniRef:UniRef100_A0A2R3FW81,UniRef:UniRef50_P44831,UniRef:UniRef90_P44831
contig_1	Pyrodigal	gene	777998	779017	.	+	.	ID=GCA000012185_00795_gene;locus_tag=GCA000012185_00795;gene=truD
contig_1	Pyrodigal	CDS	777998	779017	.	+	0	ID=GCA000012185_00795;Name=tRNA pseudouridine(13) synthase TruD;locus_tag=GCA000012185_00795;product=tRNA pseudouridine(13) synthase TruD;Dbxref=GO:0001522,GO:0003723,GO:0005829,GO:0009982,GO:0031119,GO:0160150;gene=truD;Parent=GCA000012185_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0585,COG:J,KEGG:K06176,RefSeq:WP_011272177.1,SO:0001217,UniParc:UPI000053E119,UniRef:UniRef100_Q4QML9,UniRef:UniRef50_P44039,UniRef:UniRef90_P44039;ec_number=5.4.99.27
contig_1	Pyrodigal	gene	779027	779776	.	+	.	ID=GCA000012185_00796_gene;locus_tag=GCA000012185_00796;gene=surE
contig_1	Pyrodigal	CDS	779027	779776	.	+	0	ID=GCA000012185_00796;Name=5'/3'-nucleotidase SurE;locus_tag=GCA000012185_00796;product=5'/3'-nucleotidase SurE;Dbxref=GO:0000166,GO:0004309,GO:0005737,GO:0008252,GO:0008253,GO:0008254,GO:0046872,GO:0106411;gene=surE;Parent=GCA000012185_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0496,COG:L,KEGG:K03787,RefSeq:WP_011272178.1,SO:0001217,UniParc:UPI00003CD90B,UniRef:UniRef100_Q4QML8,UniRef:UniRef50_Q9PF20,UniRef:UniRef90_P45681;ec_number=3.1.3.6
contig_1	Pyrodigal	gene	779785	780363	.	+	.	ID=GCA000012185_00797_gene;locus_tag=GCA000012185_00797;gene=ygaA
contig_1	Pyrodigal	CDS	779785	780363	.	+	0	ID=GCA000012185_00797;Name=putative protein HI_0703;locus_tag=GCA000012185_00797;product=putative protein HI_0703;Dbxref=GO:0005886;gene=ygaA;Parent=GCA000012185_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1238,COG:S,RefSeq:WP_011272179.1,SO:0001217,UniParc:UPI000053E11A,UniRef:UniRef100_A0AAJ8WAV8,UniRef:UniRef50_P44832,UniRef:UniRef90_P44832
contig_1	Pyrodigal	gene	780372	780557	.	+	.	ID=GCA000012185_00798_gene;locus_tag=GCA000012185_00798
contig_1	Pyrodigal	CDS	780372	780557	.	+	0	ID=GCA000012185_00798;Name=putative protein HI_0704;locus_tag=GCA000012185_00798;product=putative protein HI_0704;Parent=GCA000012185_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005654318.1,SO:0001217,UniParc:UPI000039A9B2,UniRef:UniRef100_A0A0D0INU1,UniRef:UniRef50_P44040,UniRef:UniRef90_P44040
contig_1	Pyrodigal	gene	780592	781809	.	+	.	ID=GCA000012185_00799_gene;locus_tag=GCA000012185_00799;gene=nlpD
contig_1	Pyrodigal	CDS	780592	781809	.	+	0	ID=GCA000012185_00799;Name=murein hydrolase activator NlpD;locus_tag=GCA000012185_00799;product=murein hydrolase activator NlpD;Dbxref=GO:0004222,GO:0009279,GO:0032153;gene=nlpD;Parent=GCA000012185_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_011272180.1,SO:0001217,UniParc:UPI000053E11B,UniRef:UniRef100_A0AAJ8WR23,UniRef:UniRef50_P44833,UniRef:UniRef90_P44833
contig_1	Bakta	gene	782009	782089	.	+	.	ID=GCA000012185_00800_gene;locus_tag=GCA000012185_00800;inference=ab initio prediction:Bakta;gene=tnaC
contig_1	Bakta	CDS	782009	782089	.	+	0	ID=GCA000012185_00800;Name=TnaC;locus_tag=GCA000012185_00800;product=TnaC;gene=tnaC;Parent=GCA000012185_00800_gene;Note=SO:0001217,UniRef:UniRef50_A0A2J9QLQ8,UniRef:UniRef90_O07673
contig_1	Pyrodigal	gene	782177	783595	.	+	.	ID=GCA000012185_00801_gene;locus_tag=GCA000012185_00801;gene=tnaA
contig_1	Pyrodigal	CDS	782177	783595	.	+	0	ID=GCA000012185_00801;Name=tryptophanase;locus_tag=GCA000012185_00801;product=tryptophanase;Dbxref=GO:0006568,GO:0009034;gene=tnaA;Parent=GCA000012185_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3033,COG:E,RefSeq:WP_011272181.1,SO:0001217,UniParc:UPI000034EBE9,UniRef:UniRef100_Q4QML4,UniRef:UniRef50_P0A853,UniRef:UniRef90_O07674;ec_number=4.1.99.1
contig_1	Pyrodigal	gene	783679	784911	.	+	.	ID=GCA000012185_00802_gene;locus_tag=GCA000012185_00802
contig_1	Pyrodigal	CDS	783679	784911	.	+	0	ID=GCA000012185_00802;Name=Aromatic amino acid permease;locus_tag=GCA000012185_00802;product=Aromatic amino acid permease;Parent=GCA000012185_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005671879.1,SO:0001217,UniParc:UPI000053E11C,UniRef:UniRef100_A0AAJ8WQY1,UniRef:UniRef50_A0AA37G733,UniRef:UniRef90_A5UHJ1
contig_1	Pyrodigal	gene	785052	787637	.	+	.	ID=GCA000012185_00803_gene;locus_tag=GCA000012185_00803;gene=mutS
contig_1	Pyrodigal	CDS	785052	787637	.	+	0	ID=GCA000012185_00803;Name=DNA mismatch repair protein MutS;locus_tag=GCA000012185_00803;product=DNA mismatch repair protein MutS;Dbxref=GO:0003684,GO:0005524,GO:0005829,GO:0006298,GO:0030983,GO:0140664;gene=mutS;Parent=GCA000012185_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_011272182.1,SO:0001217,UniParc:UPI000053E11D,UniRef:UniRef100_Q4QML2,UniRef:UniRef50_Q1LPG5,UniRef:UniRef90_P44834
contig_1	tRNAscan-SE	gene	787678	787772	.	-	.	ID=GCA000012185_00804_gene;locus_tag=GCA000012185_00804;gene=trnU
contig_1	tRNAscan-SE	tRNA	787678	787772	.	-	.	ID=GCA000012185_00804;Name=tRNA-SeC(tca);locus_tag=GCA000012185_00804;product=tRNA-SeC(tca);gene=trnU;anti_codon=tca;amino_acid=SeC;Parent=GCA000012185_00804_gene;inference=profile:tRNAscan:2.0;Note=SO:0005857
contig_1	Pyrodigal	gene	787843	789228	.	+	.	ID=GCA000012185_00805_gene;locus_tag=GCA000012185_00805;gene=selA
contig_1	Pyrodigal	CDS	787843	789228	.	+	0	ID=GCA000012185_00805;Name=L-seryl-tRNA(Sec) selenium transferase;locus_tag=GCA000012185_00805;product=L-seryl-tRNA(Sec) selenium transferase;Dbxref=GO:0001514,GO:0001717,GO:0004125,GO:0005737;gene=selA;Parent=GCA000012185_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1921,COG:J,KEGG:K01042,RefSeq:WP_011272183.1,SO:0001217,UniParc:UPI00003CD89D,UniRef:UniRef100_Q4QML1,UniRef:UniRef50_P43910,UniRef:UniRef90_P43910;ec_number=2.9.1.1
contig_1	Pyrodigal	gene	789225	791084	.	+	.	ID=GCA000012185_00806_gene;locus_tag=GCA000012185_00806;gene=selB
contig_1	Pyrodigal	CDS	789225	791084	.	+	0	ID=GCA000012185_00806;Name=selenocysteine-specific translation elongation factor;locus_tag=GCA000012185_00806;product=selenocysteine-specific translation elongation factor;Dbxref=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0016259,GO:0035368,GO:0097216;gene=selB;Parent=GCA000012185_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3276,COG:J,RefSeq:WP_011272184.1,SO:0001217,UniParc:UPI000053E11E,UniRef:UniRef100_Q4QML0,UniRef:UniRef50_P43927,UniRef:UniRef90_P43927
contig_1	Pyrodigal	gene	791103	791957	.	+	.	ID=GCA000012185_00807_gene;locus_tag=GCA000012185_00807;gene=lpp
contig_1	Pyrodigal	CDS	791103	791957	.	+	0	ID=GCA000012185_00807;Name=DUF3298 domain-containing protein;locus_tag=GCA000012185_00807;product=DUF3298 domain-containing protein;gene=lpp;Parent=GCA000012185_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4238,COG:M,RefSeq:WP_011272185.1,SO:0001217,UniParc:UPI000053E11F,UniRef:UniRef100_Q4QMK9,UniRef:UniRef50_A0A0M1GKA3,UniRef:UniRef90_A0A0M1GKA3
contig_1	Pyrodigal	gene	792077	792373	.	+	.	ID=GCA000012185_00808_gene;locus_tag=GCA000012185_00808;gene=relB
contig_1	Pyrodigal	CDS	792077	792373	.	+	0	ID=GCA000012185_00808;Name=Putative antitoxin RelB;locus_tag=GCA000012185_00808;product=Putative antitoxin RelB;Dbxref=GO:0006351,GO:0006355;gene=relB;Parent=GCA000012185_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3077,COG:V,RefSeq:WP_005692346.1,SO:0001217,UniParc:UPI000039A898,UniRef:UniRef100_A0A2S9SHW6,UniRef:UniRef50_P71357,UniRef:UniRef90_P71357
contig_1	Pyrodigal	gene	792373	792681	.	+	.	ID=GCA000012185_00809_gene;locus_tag=GCA000012185_00809;gene=yafQ
contig_1	Pyrodigal	CDS	792373	792681	.	+	0	ID=GCA000012185_00809;Name=Putative toxin YafQ;locus_tag=GCA000012185_00809;product=Putative toxin YafQ;Dbxref=GO:0004521,GO:0006402,GO:0006415;gene=yafQ;Parent=GCA000012185_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3041,COG:JV,KEGG:K19157,RefSeq:WP_011272186.1,SO:0001217,UniParc:UPI000053E120,UniRef:UniRef100_Q4QMK7,UniRef:UniRef50_P44041,UniRef:UniRef90_P44041;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	792738	795878	.	-	.	ID=GCA000012185_00810_gene;locus_tag=GCA000012185_00810
contig_1	Pyrodigal	CDS	792738	795878	.	-	0	ID=GCA000012185_00810;Name=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;locus_tag=GCA000012185_00810;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;Parent=GCA000012185_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,SO:0001217,UniRef:UniRef50_Q9KIV1,UniRef:UniRef90_UPI0011B6CE80
contig_1	Pyrodigal	gene	796227	797525	.	+	.	ID=GCA000012185_00811_gene;locus_tag=GCA000012185_00811;gene=tig
contig_1	Pyrodigal	CDS	796227	797525	.	+	0	ID=GCA000012185_00811;Name=trigger factor;locus_tag=GCA000012185_00811;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000012185_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_006995277.1,SO:0001217,UniParc:UPI000039A9BA,UniRef:UniRef100_Q4QMK6,UniRef:UniRef50_P0A850,UniRef:UniRef90_P44837;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	797648	798229	.	+	.	ID=GCA000012185_00812_gene;locus_tag=GCA000012185_00812;gene=clpP
contig_1	Pyrodigal	CDS	797648	798229	.	+	0	ID=GCA000012185_00812;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA000012185_00812;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117;gene=clpP;Parent=GCA000012185_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_005694635.1,SO:0001217,UniParc:UPI0000127B3D,UniRef:UniRef100_P43867,UniRef:UniRef50_P43867,UniRef:UniRef90_P43867;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	798239	799474	.	+	.	ID=GCA000012185_00813_gene;locus_tag=GCA000012185_00813;gene=clpX
contig_1	Pyrodigal	CDS	798239	799474	.	+	0	ID=GCA000012185_00813;Name=ATP-dependent protease ATP-binding subunit ClpX;locus_tag=GCA000012185_00813;product=ATP-dependent protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009368,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000012185_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_005661954.1,SO:0001217,UniParc:UPI0000127B70,UniRef:UniRef100_P44838,UniRef:UniRef50_Q8ZC66,UniRef:UniRef90_P44838;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	799619	800035	.	+	.	ID=GCA000012185_00814_gene;locus_tag=GCA000012185_00814;gene=secE
contig_1	Pyrodigal	CDS	799619	800035	.	+	0	ID=GCA000012185_00814;Name=preprotein translocase subunit SecE;locus_tag=GCA000012185_00814;product=preprotein translocase subunit SecE;gene=secE;Parent=GCA000012185_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_005658616.1,SO:0001217,UniParc:UPI000039A9BC,UniRef:UniRef100_A0A0H3PB72,UniRef:UniRef50_A0A0H3PB72,UniRef:UniRef90_A0A0H3PB72
contig_1	Pyrodigal	gene	800037	800594	.	+	.	ID=GCA000012185_00815_gene;locus_tag=GCA000012185_00815;gene=nusG
contig_1	Pyrodigal	CDS	800037	800594	.	+	0	ID=GCA000012185_00815;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000012185_00815;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0006353,GO:0031564,GO:0032784,GO:0140673;gene=nusG;Parent=GCA000012185_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,KEGG:K02601,RefSeq:WP_005648601.1,SO:0001217,UniParc:UPI000039A891,UniRef:UniRef100_A0A0H3PCJ8,UniRef:UniRef50_Q9KV35,UniRef:UniRef90_P43916
contig_1	Pyrodigal	gene	800745	801497	.	+	.	ID=GCA000012185_00816_gene;locus_tag=GCA000012185_00816;gene=mlaA
contig_1	Pyrodigal	CDS	800745	801497	.	+	0	ID=GCA000012185_00816;Name=Intermembrane phospholipid transport system lipoprotein MlaA;locus_tag=GCA000012185_00816;product=Intermembrane phospholipid transport system lipoprotein MlaA;Dbxref=GO:0009279,GO:0120010;gene=mlaA;Parent=GCA000012185_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2853,COG:M,KEGG:K04754,RefSeq:WP_005648600.1,SO:0001217,UniParc:UPI00003CD79A,UniRef:UniRef100_A0A2S9S7W9,UniRef:UniRef50_P44042,UniRef:UniRef90_P44042
contig_1	Pyrodigal	gene	801554	801943	.	+	.	ID=GCA000012185_00817_gene;locus_tag=GCA000012185_00817;gene=ridA
contig_1	Pyrodigal	CDS	801554	801943	.	+	0	ID=GCA000012185_00817;Name=RutC family protein HI_0719;locus_tag=GCA000012185_00817;product=RutC family protein HI_0719;Dbxref=GO:0005829,GO:0019239;gene=ridA;Parent=GCA000012185_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_005630808.1,SO:0001217,UniParc:UPI00014F74CB,UniRef:UniRef100_P44839,UniRef:UniRef50_Q7CP78,UniRef:UniRef90_P44839
contig_1	Pyrodigal	gene	802111	802962	.	+	.	ID=GCA000012185_00818_gene;locus_tag=GCA000012185_00818;gene=htpX
contig_1	Pyrodigal	CDS	802111	802962	.	+	0	ID=GCA000012185_00818;Name=protease HtpX;locus_tag=GCA000012185_00818;product=protease HtpX;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0008270;gene=htpX;Parent=GCA000012185_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0501,COG:O,SO:0001217,UniParc:UPI00003CD799,UniRef:UniRef100_Q4QMJ9,UniRef:UniRef50_P23894,UniRef:UniRef90_P44840;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	803004	803243	.	-	.	ID=GCA000012185_00819_gene;locus_tag=GCA000012185_00819;gene=tusA
contig_1	Pyrodigal	CDS	803004	803243	.	-	0	ID=GCA000012185_00819;Name=sulfurtransferase TusA;locus_tag=GCA000012185_00819;product=sulfurtransferase TusA;Dbxref=GO:0002143,GO:0005737,GO:0097163;gene=tusA;Parent=GCA000012185_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_005665561.1,SO:0001217,UniParc:UPI00003CD798,UniRef:UniRef100_Q4QMJ8,UniRef:UniRef50_P44841,UniRef:UniRef90_P44841;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	803359	803979	.	+	.	ID=GCA000012185_00820_gene;locus_tag=GCA000012185_00820;gene=yIH1
contig_1	Pyrodigal	CDS	803359	803979	.	+	0	ID=GCA000012185_00820;Name=IMPACT family member HI_0722;locus_tag=GCA000012185_00820;product=IMPACT family member HI_0722;Dbxref=GO:0005737,GO:0006446,GO:0017111,GO:0032561;gene=yIH1;Parent=GCA000012185_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1739,COG:R,RefSeq:WP_011272188.1,SO:0001217,UniParc:UPI00003CD797,UniRef:UniRef100_A0A346K8E4,UniRef:UniRef50_P44842,UniRef:UniRef90_P44842
contig_1	Pyrodigal	gene	803982	805445	.	+	.	ID=GCA000012185_00821_gene;locus_tag=GCA000012185_00821;gene=trkH
contig_1	Pyrodigal	CDS	803982	805445	.	+	0	ID=GCA000012185_00821;Name=Trk system potassium uptake protein TrkH;locus_tag=GCA000012185_00821;product=Trk system potassium uptake protein TrkH;Dbxref=GO:0005267,GO:0005886,GO:0015379,GO:0030955,GO:0071805;gene=trkH;Parent=GCA000012185_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_005658606.1,SO:0001217,UniParc:UPI000039A9BF,UniRef:UniRef100_A0A0H3PK23,UniRef:UniRef50_P44843,UniRef:UniRef90_P44843
contig_1	Infernal	gene	805804	807343	.	+	.	ID=GCA000012185_00822_gene;locus_tag=GCA000012185_00822;gene=rrs
contig_1	Infernal	rRNA	805804	807343	5.8e-47	+	.	ID=GCA000012185_00822;Name=16S ribosomal RNA;locus_tag=GCA000012185_00822;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_00822_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	807475	807550	.	+	.	ID=GCA000012185_00823_gene;locus_tag=GCA000012185_00823;gene=trnE
contig_1	tRNAscan-SE	tRNA	807475	807550	.	+	.	ID=GCA000012185_00823;Name=tRNA-Glu(ttc);locus_tag=GCA000012185_00823;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000012185_00823_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	Infernal	gene	807820	810935	.	+	.	ID=GCA000012185_00824_gene;locus_tag=GCA000012185_00824;gene=rrl
contig_1	Infernal	rRNA	807820	810935	3e-06	+	.	ID=GCA000012185_00824;Name=23S ribosomal RNA;locus_tag=GCA000012185_00824;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_00824_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	811178	811293	.	+	.	ID=GCA000012185_00825_gene;locus_tag=GCA000012185_00825;gene=rrf
contig_1	Infernal	rRNA	811178	811293	5.6e-14	+	.	ID=GCA000012185_00825;Name=5S ribosomal RNA;locus_tag=GCA000012185_00825;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00825_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	811342	811457	.	+	.	ID=GCA000012185_00826_gene;locus_tag=GCA000012185_00826;gene=rrf
contig_1	Infernal	rRNA	811342	811457	4e-14	+	.	ID=GCA000012185_00826;Name=5S ribosomal RNA;locus_tag=GCA000012185_00826;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00826_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	811470	811546	.	+	.	ID=GCA000012185_00827_gene;locus_tag=GCA000012185_00827;gene=trnD
contig_1	tRNAscan-SE	tRNA	811470	811546	.	+	.	ID=GCA000012185_00827;Name=tRNA-Asp(gtc);locus_tag=GCA000012185_00827;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000012185_00827_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	811575	811650	.	+	.	ID=GCA000012185_00828_gene;locus_tag=GCA000012185_00828;gene=trnW
contig_1	tRNAscan-SE	tRNA	811575	811650	.	+	.	ID=GCA000012185_00828;Name=tRNA-Trp(cca);locus_tag=GCA000012185_00828;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000012185_00828_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	Pyrodigal	gene	811880	812299	.	+	.	ID=GCA000012185_00829_gene;locus_tag=GCA000012185_00829;gene=psiE
contig_1	Pyrodigal	CDS	811880	812299	.	+	0	ID=GCA000012185_00829;Name=phosphate-starvation-inducible protein PsiE;locus_tag=GCA000012185_00829;product=phosphate-starvation-inducible protein PsiE;Dbxref=GO:0005886,GO:0016036;gene=psiE;Parent=GCA000012185_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3223,COG:R,KEGG:K13256,RefSeq:WP_005661523.1,SO:0001217,UniParc:UPI000053E122,UniRef:UniRef100_Q4QMJ5,UniRef:UniRef50_Q4QMJ5,UniRef:UniRef90_Q4QMJ5
contig_1	Pyrodigal	gene	812363	813649	.	-	.	ID=GCA000012185_00830_gene;locus_tag=GCA000012185_00830;gene=hemY
contig_1	Pyrodigal	CDS	812363	813649	.	-	0	ID=GCA000012185_00830;Name=Protein HemY-like protein;locus_tag=GCA000012185_00830;product=Protein HemY-like protein;Dbxref=GO:0005886,GO:0006779,GO:0042168;gene=hemY;Parent=GCA000012185_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3071,COG:S,RefSeq:WP_005661525.1,SO:0001217,UniParc:UPI000053E123,UniRef:UniRef100_A0A2R3FXD1,UniRef:UniRef50_P44772,UniRef:UniRef90_P44772
contig_1	Pyrodigal	gene	813660	814871	.	-	.	ID=GCA000012185_00831_gene;locus_tag=GCA000012185_00831;gene=hemX
contig_1	Pyrodigal	CDS	813660	814871	.	-	0	ID=GCA000012185_00831;Name=Putative uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000012185_00831;product=Putative uroporphyrinogen-III C-methyltransferase;gene=hemX;Parent=GCA000012185_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2959,COG:R,KEGG:K02496,RefSeq:WP_005668488.1,SO:0001217,UniParc:UPI000039A9EC,UniRef:UniRef100_A0A2R3FWX6,UniRef:UniRef50_F0EQK6,UniRef:UniRef90_A0A2S9RR13;ec_number=2.1.1.107
contig_1	Pyrodigal	gene	815177	817708	.	+	.	ID=GCA000012185_00832_gene;locus_tag=GCA000012185_00832;gene=cyaA
contig_1	Pyrodigal	CDS	815177	817708	.	+	0	ID=GCA000012185_00832;Name=class I adenylate cyclase;locus_tag=GCA000012185_00832;product=class I adenylate cyclase;Dbxref=GO:0004016,GO:0005524,GO:0005737,GO:0006171,GO:0030420;gene=cyaA;Parent=GCA000012185_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3072,COG:T,KEGG:K05851,RefSeq:WP_011272189.1,SO:0001217,UniParc:UPI000053E124,UniRef:UniRef100_Q4QMJ2,UniRef:UniRef50_P40134,UniRef:UniRef90_P40134;ec_number=4.6.1.1
contig_1	Pyrodigal	gene	817782	818789	.	+	.	ID=GCA000012185_00833_gene;locus_tag=GCA000012185_00833;gene=gpsA
contig_1	Pyrodigal	CDS	817782	818789	.	+	0	ID=GCA000012185_00833;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000012185_00833;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006072,GO:0046167,GO:0046168,GO:0046474,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000012185_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_011272190.1,SO:0001217,UniParc:UPI000053E125,UniRef:UniRef100_Q4QMJ1,UniRef:UniRef50_P0A6S7,UniRef:UniRef90_P43798;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	818806	819609	.	+	.	ID=GCA000012185_00834_gene;locus_tag=GCA000012185_00834;gene=cysE
contig_1	Pyrodigal	CDS	818806	819609	.	+	0	ID=GCA000012185_00834;Name=serine O-acetyltransferase;locus_tag=GCA000012185_00834;product=serine O-acetyltransferase;Dbxref=GO:0005829,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000012185_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1045,COG:E,RefSeq:WP_005694542.1,SO:0001217,UniParc:UPI0000128CDC,UniRef:UniRef100_P43886,UniRef:UniRef50_P43886,UniRef:UniRef90_P43886;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	819619	820434	.	+	.	ID=GCA000012185_00835_gene;locus_tag=GCA000012185_00835;gene=sdhL
contig_1	Pyrodigal	CDS	819619	820434	.	+	0	ID=GCA000012185_00835;Name=shikimate 5-dehydrogenase;locus_tag=GCA000012185_00835;product=shikimate 5-dehydrogenase;Dbxref=GO:0004764,GO:0005829,GO:0009423,GO:0019632,GO:0050661;gene=sdhL;Parent=GCA000012185_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_005692744.1,SO:0001217,UniParc:UPI000053E126,UniRef:UniRef100_A0A2S9RDF9,UniRef:UniRef50_P44774,UniRef:UniRef90_P44774;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	820572	821957	.	+	.	ID=GCA000012185_00836_gene;locus_tag=GCA000012185_00836;gene=citT
contig_1	Pyrodigal	CDS	820572	821957	.	+	0	ID=GCA000012185_00836;Name=putative transporter HI_0608;locus_tag=GCA000012185_00836;product=putative transporter HI_0608;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=citT;Parent=GCA000012185_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_005688232.1,SO:0001217,UniParc:UPI000053E127,UniRef:UniRef100_A0A1Q5Y404,UniRef:UniRef50_Q57486,UniRef:UniRef90_Q57486
contig_1	Pyrodigal	gene	822095	822943	.	-	.	ID=GCA000012185_00837_gene;locus_tag=GCA000012185_00837;gene=folD
contig_1	Pyrodigal	CDS	822095	822943	.	-	0	ID=GCA000012185_00837;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA000012185_00837;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999;gene=folD;Parent=GCA000012185_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0190,COG:H,RefSeq:WP_005654480.1,SO:0001217,UniParc:UPI00001685B7,UniRef:UniRef100_P44313,UniRef:UniRef50_P44313,UniRef:UniRef90_P44313;ec_number=3.5.4.9
contig_1	tRNAscan-SE	gene	823125	823201	.	+	.	ID=GCA000012185_00838_gene;locus_tag=GCA000012185_00838;gene=trnP
contig_1	tRNAscan-SE	tRNA	823125	823201	.	+	.	ID=GCA000012185_00838;Name=tRNA-Pro(tgg);locus_tag=GCA000012185_00838;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000012185_00838_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	823249	823325	.	+	.	ID=GCA000012185_00839_gene;locus_tag=GCA000012185_00839;gene=trnR
contig_1	tRNAscan-SE	tRNA	823249	823325	.	+	.	ID=GCA000012185_00839;Name=tRNA-Arg(tct);locus_tag=GCA000012185_00839;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000012185_00839_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	823471	824757	.	-	.	ID=GCA000012185_00840_gene;locus_tag=GCA000012185_00840;gene=fucP
contig_1	Pyrodigal	CDS	823471	824757	.	-	0	ID=GCA000012185_00840;Name=L-fucose:H+ symporter permease;locus_tag=GCA000012185_00840;product=L-fucose:H+ symporter permease;Dbxref=GO:0005886,GO:0006004,GO:0015150,GO:0015535,GO:0015756;gene=fucP;Parent=GCA000012185_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0738,COG:G,KEGG:K02429,RefSeq:WP_011272191.1,SO:0001217,UniParc:UPI00003CDA0A,UniRef:UniRef100_A0A346K8D3,UniRef:UniRef50_P44776,UniRef:UniRef90_P44776
contig_1	Pyrodigal	gene	824796	825446	.	-	.	ID=GCA000012185_00841_gene;locus_tag=GCA000012185_00841;gene=fucA
contig_1	Pyrodigal	CDS	824796	825446	.	-	0	ID=GCA000012185_00841;Name=L-fuculose-phosphate aldolase;locus_tag=GCA000012185_00841;product=L-fuculose-phosphate aldolase;Dbxref=GO:0005829,GO:0006004,GO:0008270,GO:0008738,GO:0016832,GO:0019323,GO:0019568,GO:0042355;gene=fucA;Parent=GCA000012185_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,RefSeq:WP_005648575.1,SO:0001217,UniParc:UPI000039A7F6,UniRef:UniRef100_A0A0D0H190,UniRef:UniRef50_P0AB87,UniRef:UniRef90_P44777;ec_number=4.1.2.17
contig_1	Pyrodigal	gene	825466	825900	.	-	.	ID=GCA000012185_00842_gene;locus_tag=GCA000012185_00842;gene=fucU
contig_1	Pyrodigal	CDS	825466	825900	.	-	0	ID=GCA000012185_00842;Name=L-fucose mutarotase;locus_tag=GCA000012185_00842;product=L-fucose mutarotase;Dbxref=GO:0005737,GO:0006004,GO:0016854,GO:0016857,GO:0036065,GO:0036373,GO:0042354,GO:0042806;gene=fucU;Parent=GCA000012185_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4154,COG:G,KEGG:K02431,RefSeq:WP_005654478.1,SO:0001217,UniParc:UPI000039A9F4,UniRef:UniRef100_Q4QMI4,UniRef:UniRef50_P44778,UniRef:UniRef90_P44778;ec_number=5.1.3.29
contig_1	Pyrodigal	gene	825914	827326	.	-	.	ID=GCA000012185_00843_gene;locus_tag=GCA000012185_00843;gene=fucK
contig_1	Pyrodigal	CDS	825914	827326	.	-	0	ID=GCA000012185_00843;Name=L-fuculokinase;locus_tag=GCA000012185_00843;product=L-fuculokinase;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0008737,GO:0019301,GO:0042355;gene=fucK;Parent=GCA000012185_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K00879,RefSeq:WP_011272192.1,SO:0001217,UniParc:UPI000053E128,UniRef:UniRef100_A0A2S9S774,UniRef:UniRef50_P44399,UniRef:UniRef90_P44399;ec_number=2.7.1.51
contig_1	Pyrodigal	gene	827399	829168	.	-	.	ID=GCA000012185_00844_gene;locus_tag=GCA000012185_00844;gene=fucI
contig_1	Pyrodigal	CDS	827399	829168	.	-	0	ID=GCA000012185_00844;Name=L-fucose isomerase;locus_tag=GCA000012185_00844;product=L-fucose isomerase;Dbxref=GO:0005737,GO:0008736,GO:0008790,GO:0019317,GO:0019571,GO:0030145,GO:0042355;gene=fucI;Parent=GCA000012185_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2407,COG:G,KEGG:K01818,RefSeq:WP_011272193.1,SO:0001217,UniParc:UPI00016100C8,UniRef:UniRef100_Q4QMI2,UniRef:UniRef50_P69922,UniRef:UniRef90_P44779;ec_number=5.3.1.25
contig_1	Pyrodigal	gene	829398	830147	.	-	.	ID=GCA000012185_00845_gene;locus_tag=GCA000012185_00845;gene=fucR
contig_1	Pyrodigal	CDS	829398	830147	.	-	0	ID=GCA000012185_00845;Name=L-fucose operon activator;locus_tag=GCA000012185_00845;product=L-fucose operon activator;Dbxref=GO:0003677,GO:0003700,GO:0006004;gene=fucR;Parent=GCA000012185_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02430,RefSeq:WP_005654475.1,SO:0001217,UniParc:UPI00003CD909,UniRef:UniRef100_A7LQ55,UniRef:UniRef50_P44780,UniRef:UniRef90_P44780
contig_1	Pyrodigal	gene	830346	833117	.	+	.	ID=GCA000012185_00846_gene;locus_tag=GCA000012185_00846;gene=rapA
contig_1	Pyrodigal	CDS	830346	833117	.	+	0	ID=GCA000012185_00846;Name=RNA polymerase-associated protein RapA;locus_tag=GCA000012185_00846;product=RNA polymerase-associated protein RapA;Dbxref=GO:0003677,GO:0004386,GO:0005524,GO:0006281,GO:0006355,GO:0016817,GO:0140658;gene=rapA;Parent=GCA000012185_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0553,COG:KL,KEGG:K03580,RefSeq:WP_011272194.1,SO:0001217,UniParc:UPI00003CD908,UniRef:UniRef100_Q4QMI0,UniRef:UniRef50_P60240,UniRef:UniRef90_P44781;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	833120	833779	.	+	.	ID=GCA000012185_00847_gene;locus_tag=GCA000012185_00847;gene=rluA
contig_1	Pyrodigal	CDS	833120	833779	.	+	0	ID=GCA000012185_00847;Name=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;locus_tag=GCA000012185_00847;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0008033,GO:0009451,GO:0009982,GO:0160142,GO:0160151;gene=rluA;Parent=GCA000012185_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06177,RefSeq:WP_011272195.1,SO:0001217,UniParc:UPI00003CD907,UniRef:UniRef100_A0AAJ8WAT6,UniRef:UniRef50_P44782,UniRef:UniRef90_P44782;ec_number=5.4.99.29
contig_1	Pyrodigal	gene	833806	834384	.	+	.	ID=GCA000012185_00848_gene;locus_tag=GCA000012185_00848;gene=glpG
contig_1	Pyrodigal	CDS	833806	834384	.	+	0	ID=GCA000012185_00848;Name=Rhomboid protease GlpG;locus_tag=GCA000012185_00848;product=Rhomboid protease GlpG;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0042802;gene=glpG;Parent=GCA000012185_00848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,KEGG:K02441,RefSeq:WP_011272196.1,SO:0001217,UniParc:UPI000053E12A,UniRef:UniRef100_A0AAJ8WAW6,UniRef:UniRef50_P44783,UniRef:UniRef90_P44783;ec_number=3.4.21.105
contig_1	Pyrodigal	gene	834414	835181	.	+	.	ID=GCA000012185_00849_gene;locus_tag=GCA000012185_00849;gene=glpR
contig_1	Pyrodigal	CDS	834414	835181	.	+	0	ID=GCA000012185_00849;Name=DeoR/GlpR family transcriptional regulator;locus_tag=GCA000012185_00849;product=DeoR/GlpR family transcriptional regulator;Dbxref=GO:0003677,GO:0003700,GO:0006071;gene=glpR;Parent=GCA000012185_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_005661561.1,SO:0001217,UniParc:UPI000012B7B2,UniRef:UniRef100_P44784,UniRef:UniRef50_P44784,UniRef:UniRef90_P44784
contig_1	Pyrodigal	gene	835483	836304	.	-	.	ID=GCA000012185_00850_gene;locus_tag=GCA000012185_00850;gene=metQ
contig_1	Pyrodigal	CDS	835483	836304	.	-	0	ID=GCA000012185_00850;Name=putative D-methionine-binding lipoprotein MetQ;locus_tag=GCA000012185_00850;product=putative D-methionine-binding lipoprotein MetQ;Dbxref=GO:0006865,GO:0009279;gene=metQ;Parent=GCA000012185_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_005654466.1,SO:0001217,UniParc:UPI000004CAA4,UniRef:UniRef100_A0A0D0HT06,UniRef:UniRef50_P31728,UniRef:UniRef90_P31728
contig_1	Pyrodigal	gene	836343	837032	.	-	.	ID=GCA000012185_00851_gene;locus_tag=GCA000012185_00851;gene=metI
contig_1	Pyrodigal	CDS	836343	837032	.	-	0	ID=GCA000012185_00851;Name=putative D-methionine transport system permease protein MetI;locus_tag=GCA000012185_00851;product=putative D-methionine transport system permease protein MetI;Dbxref=GO:0005886,GO:0048473;gene=metI;Parent=GCA000012185_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_011272197.1,SO:0001217,UniParc:UPI000053E12B,UniRef:UniRef100_A0A2R3G2G6,UniRef:UniRef50_P46492,UniRef:UniRef90_P46492
contig_1	Pyrodigal	gene	837022	838059	.	-	.	ID=GCA000012185_00852_gene;locus_tag=GCA000012185_00852;gene=metN
contig_1	Pyrodigal	CDS	837022	838059	.	-	0	ID=GCA000012185_00852;Name=methionine ABC transporter ATP-binding protein MetN;locus_tag=GCA000012185_00852;product=methionine ABC transporter ATP-binding protein MetN;Dbxref=GO:0005524,GO:0005886,GO:0009276,GO:0016887,GO:0033232,GO:0048473;gene=metN;Parent=GCA000012185_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_005648552.1,SO:0001217,UniParc:UPI000039A9FE,UniRef:UniRef100_Q4QMH4,UniRef:UniRef50_P44785,UniRef:UniRef90_P44785;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	838235	838789	.	+	.	ID=GCA000012185_00853_gene;locus_tag=GCA000012185_00853;gene=gmhB
contig_1	Pyrodigal	CDS	838235	838789	.	+	0	ID=GCA000012185_00853;Name=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;locus_tag=GCA000012185_00853;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;Dbxref=GO:0000287,GO:0005737,GO:0005975,GO:0008270,GO:0016791,GO:0034200,GO:0097171;gene=gmhB;Parent=GCA000012185_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0241,COG:E,RefSeq:WP_005654456.1,SO:0001217,UniParc:UPI00003CD9AB,UniRef:UniRef100_A0A2S9S764,UniRef:UniRef50_P63228,UniRef:UniRef90_P46452;ec_number=3.1.3.82
contig_1	Infernal	gene	839128	840667	.	+	.	ID=GCA000012185_00854_gene;locus_tag=GCA000012185_00854;gene=rrs
contig_1	Infernal	rRNA	839128	840667	5.8e-47	+	.	ID=GCA000012185_00854;Name=16S ribosomal RNA;locus_tag=GCA000012185_00854;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_00854_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	840747	840823	.	+	.	ID=GCA000012185_00855_gene;locus_tag=GCA000012185_00855;gene=trnI
contig_1	tRNAscan-SE	tRNA	840747	840823	.	+	.	ID=GCA000012185_00855;Name=tRNA-Ile(gat);locus_tag=GCA000012185_00855;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000012185_00855_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	840909	840984	.	+	.	ID=GCA000012185_00856_gene;locus_tag=GCA000012185_00856;gene=trnA
contig_1	tRNAscan-SE	tRNA	840909	840984	.	+	.	ID=GCA000012185_00856;Name=tRNA-Ala(tgc);locus_tag=GCA000012185_00856;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000012185_00856_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Infernal	gene	841390	844505	.	+	.	ID=GCA000012185_00857_gene;locus_tag=GCA000012185_00857;gene=rrl
contig_1	Infernal	rRNA	841390	844505	3e-06	+	.	ID=GCA000012185_00857;Name=23S ribosomal RNA;locus_tag=GCA000012185_00857;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_00857_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	844748	844863	.	+	.	ID=GCA000012185_00858_gene;locus_tag=GCA000012185_00858;gene=rrf
contig_1	Infernal	rRNA	844748	844863	2.7e-14	+	.	ID=GCA000012185_00858;Name=5S ribosomal RNA;locus_tag=GCA000012185_00858;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_00858_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	845041	845601	.	+	.	ID=GCA000012185_00859_gene;locus_tag=GCA000012185_00859;gene=yihI
contig_1	Pyrodigal	CDS	845041	845601	.	+	0	ID=GCA000012185_00859;Name=Der GTPase-activating protein YihI;locus_tag=GCA000012185_00859;product=Der GTPase-activating protein YihI;Dbxref=GO:0005096,GO:0042254;gene=yihI;Parent=GCA000012185_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3078,COG:J,KEGG:K09894,RefSeq:WP_005648548.1,SO:0001217,UniParc:UPI000039AA00,UniRef:UniRef100_Q4QMH2,UniRef:UniRef50_Q0I282,UniRef:UniRef90_P44844
contig_1	Pyrodigal	gene	845605	846045	.	+	.	ID=GCA000012185_00860_gene;locus_tag=GCA000012185_00860
contig_1	Pyrodigal	CDS	845605	846045	.	+	0	ID=GCA000012185_00860;Name=putative protein HI_0725;locus_tag=GCA000012185_00860;product=putative protein HI_0725;Dbxref=GO:0016020;Parent=GCA000012185_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648547.1,SO:0001217,UniParc:UPI000039A88C,UniRef:UniRef100_A0A0D0IHI9,UniRef:UniRef50_P44043,UniRef:UniRef90_P44043
contig_1	Pyrodigal	gene	846107	846733	.	-	.	ID=GCA000012185_00861_gene;locus_tag=GCA000012185_00861;gene=narL
contig_1	Pyrodigal	CDS	846107	846733	.	-	0	ID=GCA000012185_00861;Name=two-component system response regulator NarL;locus_tag=GCA000012185_00861;product=two-component system response regulator NarL;Dbxref=GO:0000160,GO:0003677,GO:0005524,GO:0006355;gene=narL;Parent=GCA000012185_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07685,RefSeq:WP_005648546.1,SO:0001217,UniParc:UPI000039A88B,UniRef:UniRef100_A0A2R3G1M3,UniRef:UniRef50_P31802,UniRef:UniRef90_P44845
contig_1	Pyrodigal	gene	846939	848186	.	-	.	ID=GCA000012185_00862_gene;locus_tag=GCA000012185_00862;gene=lysA
contig_1	Pyrodigal	CDS	846939	848186	.	-	0	ID=GCA000012185_00862;Name=diaminopimelate decarboxylase;locus_tag=GCA000012185_00862;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0030170;gene=lysA;Parent=GCA000012185_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_011272198.1,SO:0001217,UniParc:UPI00003CD78A,UniRef:UniRef100_A0A2R3G1M6,UniRef:UniRef50_Q9KVL7,UniRef:UniRef90_P44316;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	848234	848350	.	-	.	ID=GCA000012185_00863_gene;locus_tag=GCA000012185_00863;gene=lptM
contig_1	Pyrodigal	CDS	848234	848350	.	-	0	ID=GCA000012185_00863;Name=LPS translocon maturation chaperone LptM;locus_tag=GCA000012185_00863;product=LPS translocon maturation chaperone LptM;gene=lptM;Parent=GCA000012185_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005652274.1,SO:0001217,UniParc:UPI00014FB57D,UniRef:UniRef100_Q4QMG8,UniRef:UniRef50_C9PNJ2,UniRef:UniRef90_Q4QMG8
contig_1	Pyrodigal	gene	848448	848753	.	+	.	ID=GCA000012185_00864_gene;locus_tag=GCA000012185_00864;gene=cyaY
contig_1	Pyrodigal	CDS	848448	848753	.	+	0	ID=GCA000012185_00864;Name=iron donor protein CyaY;locus_tag=GCA000012185_00864;product=iron donor protein CyaY;Dbxref=GO:0005506,GO:0005829,GO:0008198,GO:0008199,GO:0016226;gene=cyaY;Parent=GCA000012185_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1965,COG:P,RefSeq:WP_005655473.1,SO:0001217,UniParc:UPI00001288A3,UniRef:UniRef100_P71358,UniRef:UniRef50_P71358,UniRef:UniRef90_P71358
contig_1	Pyrodigal	gene	848755	850614	.	+	.	ID=GCA000012185_00865_gene;locus_tag=GCA000012185_00865;gene=recQ
contig_1	Pyrodigal	CDS	848755	850614	.	+	0	ID=GCA000012185_00865;Name=DNA helicase RecQ;locus_tag=GCA000012185_00865;product=DNA helicase RecQ;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005694,GO:0005737,GO:0006260,GO:0006281,GO:0006310,GO:0009378,GO:0009432,GO:0016853,GO:0016887,GO:0030894,GO:0032508,GO:0036121,GO:0043138,GO:0043590,GO:0046872,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recQ;Parent=GCA000012185_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_005689013.1,SO:0001217,UniParc:UPI00003CD789,UniRef:UniRef100_A0A2R3FXI9,UniRef:UniRef50_P15043,UniRef:UniRef90_P71359;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	850699	852417	.	+	.	ID=GCA000012185_00866_gene;locus_tag=GCA000012185_00866;gene=proS
contig_1	Pyrodigal	CDS	850699	852417	.	+	0	ID=GCA000012185_00866;Name=proline--tRNA ligase;locus_tag=GCA000012185_00866;product=proline--tRNA ligase;Dbxref=GO:0002161,GO:0004827,GO:0005524,GO:0005829,GO:0006433;gene=proS;Parent=GCA000012185_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_005689016.1,SO:0001217,UniParc:UPI00003CD788,UniRef:UniRef100_Q4QMG5,UniRef:UniRef50_P43830,UniRef:UniRef90_P43830;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	852505	854853	.	-	.	ID=GCA000012185_00867_gene;locus_tag=GCA000012185_00867;gene=lptD
contig_1	Pyrodigal	CDS	852505	854853	.	-	0	ID=GCA000012185_00867;Name=LPS assembly protein LptD;locus_tag=GCA000012185_00867;product=LPS assembly protein LptD;Dbxref=GO:0009279,GO:0015920,GO:0019867,GO:0043165,GO:1990351;gene=lptD;Parent=GCA000012185_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1452,COG:M,RefSeq:WP_005689018.1,SO:0001217,UniParc:UPI000004C0DA,UniRef:UniRef100_Q4QMG4,UniRef:UniRef50_Q9CKL2,UniRef:UniRef90_P44846
contig_1	Pyrodigal	gene	854976	856385	.	-	.	ID=GCA000012185_00868_gene;locus_tag=GCA000012185_00868;gene=ftsP
contig_1	Pyrodigal	CDS	854976	856385	.	-	0	ID=GCA000012185_00868;Name=putative protein HI_0732;locus_tag=GCA000012185_00868;product=putative protein HI_0732;Dbxref=GO:0005507,GO:0016491,GO:0030288,GO:0032153,GO:0043093;gene=ftsP;Parent=GCA000012185_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2132,COG:DPM,RefSeq:WP_005689021.1,SO:0001217,UniParc:UPI000053E12D,UniRef:UniRef100_P44045,UniRef:UniRef50_Q9CPE1,UniRef:UniRef90_P44045
contig_1	Pyrodigal	gene	856387	857109	.	-	.	ID=GCA000012185_00869_gene;locus_tag=GCA000012185_00869;gene=plsC
contig_1	Pyrodigal	CDS	856387	857109	.	-	0	ID=GCA000012185_00869;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA000012185_00869;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;Dbxref=GO:0003841,GO:0005886,GO:0006654,GO:0016024;gene=plsC;Parent=GCA000012185_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_005689023.1,SO:0001217,UniParc:UPI0000131C41,UniRef:UniRef100_P44848,UniRef:UniRef50_P26647,UniRef:UniRef90_P44848;ec_number=2.3.1.51
contig_1	Pyrodigal	gene	857195	857908	.	+	.	ID=GCA000012185_00870_gene;locus_tag=GCA000012185_00870;gene=lpxH
contig_1	Pyrodigal	CDS	857195	857908	.	+	0	ID=GCA000012185_00870;Name=UDP-2%2C3-diacylglucosamine pyrophosphohydrolase;locus_tag=GCA000012185_00870;product=UDP-2%2C3-diacylglucosamine pyrophosphohydrolase;Dbxref=GO:0005737,GO:0008758,GO:0009245,GO:0016462,GO:0019897,GO:0030145;gene=lpxH;Parent=GCA000012185_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2908,COG:M,KEGG:K03269,RefSeq:WP_005689025.1,SO:0001217,UniParc:UPI00003CDAC9,UniRef:UniRef100_Q4QMG1,UniRef:UniRef50_P44046,UniRef:UniRef90_P44046,VFDB:VFC0258,VFDB:VFG013321;ec_number=3.6.1.54
contig_1	Pyrodigal	gene	858041	858136	.	-	.	ID=GCA000012185_00871_gene;locus_tag=GCA000012185_00871
contig_1	Pyrodigal	CDS	858041	858136	.	-	0	ID=GCA000012185_00871;Name=Methionine/alanine import family NSS transporter small subunit;locus_tag=GCA000012185_00871;product=Methionine/alanine import family NSS transporter small subunit;Parent=GCA000012185_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005689027.1,SO:0001217,UniParc:UPI0001A3F89A,UniRef:UniRef100_A0A2S9S5N1,UniRef:UniRef50_A0A2S9S5N1,UniRef:UniRef90_A0A2S9S5N1
contig_1	Pyrodigal	gene	858138	859664	.	-	.	ID=GCA000012185_00872_gene;locus_tag=GCA000012185_00872;gene=yocR
contig_1	Pyrodigal	CDS	858138	859664	.	-	0	ID=GCA000012185_00872;Name=putative sodium-dependent transporter HI_0736;locus_tag=GCA000012185_00872;product=putative sodium-dependent transporter HI_0736;Dbxref=GO:0005886,GO:0015293,GO:0035725;gene=yocR;Parent=GCA000012185_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_011272200.1,SO:0001217,UniParc:UPI000053E12E,UniRef:UniRef100_A0A2S9S5P3,UniRef:UniRef50_P44849,UniRef:UniRef90_P44849
contig_1	Pyrodigal	gene	859911	860537	.	+	.	ID=GCA000012185_00873_gene;locus_tag=GCA000012185_00873;gene=ilvM
contig_1	Pyrodigal	CDS	859911	860537	.	+	0	ID=GCA000012185_00873;Name=UDP-2%2C3-diacylglucosamine hydrolase;locus_tag=GCA000012185_00873;product=UDP-2%2C3-diacylglucosamine hydrolase;gene=ilvM;Parent=GCA000012185_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3978,COG:E,RefSeq:WP_011272201.1,SO:0001217,UniParc:UPI00003CDB14,UniRef:UniRef100_A0A2R3G1N8,UniRef:UniRef50_O05031,UniRef:UniRef90_A5UHP0
contig_1	Pyrodigal	gene	860579	862417	.	+	.	ID=GCA000012185_00874_gene;locus_tag=GCA000012185_00874;gene=ilvD
contig_1	Pyrodigal	CDS	860579	862417	.	+	0	ID=GCA000012185_00874;Name=dihydroxy-acid dehydratase;locus_tag=GCA000012185_00874;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0016836,GO:0051537;gene=ilvD;Parent=GCA000012185_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_005692664.1,SO:0001217,UniParc:UPI000053E12F,UniRef:UniRef100_Q4QMF8,UniRef:UniRef50_Q8ZAB3,UniRef:UniRef90_P44851;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	862497	864038	.	+	.	ID=GCA000012185_00875_gene;locus_tag=GCA000012185_00875;gene=ilvA
contig_1	Pyrodigal	CDS	862497	864038	.	+	0	ID=GCA000012185_00875;Name=threonine ammonia-lyase%2C biosynthetic;locus_tag=GCA000012185_00875;product=threonine ammonia-lyase%2C biosynthetic;Dbxref=GO:0003941,GO:0004794,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000012185_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_005692663.1,SO:0001217,UniParc:UPI000053E130,UniRef:UniRef100_A0A2R3G2M7,UniRef:UniRef50_P04968,UniRef:UniRef90_P46493;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	864076	867555	.	-	.	ID=GCA000012185_00876_gene;locus_tag=GCA000012185_00876;gene=dnaE
contig_1	Pyrodigal	CDS	864076	867555	.	-	0	ID=GCA000012185_00876;Name=DNA polymerase III subunit alpha;locus_tag=GCA000012185_00876;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA000012185_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,KEGG:K02337,RefSeq:WP_011272202.1,SO:0001217,UniParc:UPI000053E131,UniRef:UniRef100_A0A2S9S5P4,UniRef:UniRef50_Q9HXZ1,UniRef:UniRef90_P43743;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	867794	869437	.	+	.	ID=GCA000012185_00877_gene;locus_tag=GCA000012185_00877;gene=manB
contig_1	Pyrodigal	CDS	867794	869437	.	+	0	ID=GCA000012185_00877;Name=phosphomannomutase;locus_tag=GCA000012185_00877;product=phosphomannomutase;Dbxref=GO:0000287,GO:0004615,GO:0005975,GO:0006166,GO:0008973;gene=manB;Parent=GCA000012185_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_011272203.1,SO:0001217,UniParc:UPI000053E132,UniRef:UniRef100_A0A2R3G2X5,UniRef:UniRef50_Q57290,UniRef:UniRef90_Q57290,VFDB:VFC0258,VFDB:VFG013327;ec_number=5.4.2.8
contig_1	Pyrodigal	gene	869604	870113	.	-	.	ID=GCA000012185_00878_gene;locus_tag=GCA000012185_00878;gene=secB
contig_1	Pyrodigal	CDS	869604	870113	.	-	0	ID=GCA000012185_00878;Name=protein-export chaperone SecB;locus_tag=GCA000012185_00878;product=protein-export chaperone SecB;Dbxref=GO:0005737,GO:0006457,GO:0015031,GO:0051082,GO:0051262;gene=secB;Parent=GCA000012185_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1952,COG:U,KEGG:K03071,RefSeq:WP_005630575.1,SO:0001217,UniParc:UPI00001117E3,UniRef:UniRef100_P44853,UniRef:UniRef50_P44853,UniRef:UniRef90_P44853
contig_1	Pyrodigal	gene	870127	870573	.	-	.	ID=GCA000012185_00879_gene;locus_tag=GCA000012185_00879;gene=pspE
contig_1	Pyrodigal	CDS	870127	870573	.	-	0	ID=GCA000012185_00879;Name=putative protein HI_0744;locus_tag=GCA000012185_00879;product=putative protein HI_0744;gene=pspE;Parent=GCA000012185_00879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_005648518.1,SO:0001217,UniParc:UPI000039AA0B,UniRef:UniRef100_A0A0H3PFU6,UniRef:UniRef50_P44854,UniRef:UniRef90_P44854
contig_1	Pyrodigal	gene	870821	872143	.	+	.	ID=GCA000012185_00880_gene;locus_tag=GCA000012185_00880;gene=dcuB
contig_1	Pyrodigal	CDS	870821	872143	.	+	0	ID=GCA000012185_00880;Name=Anaerobic C4-dicarboxylate transporter DcuB;locus_tag=GCA000012185_00880;product=Anaerobic C4-dicarboxylate transporter DcuB;Dbxref=GO:0005886,GO:0015297,GO:0015556;gene=dcuB;Parent=GCA000012185_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2704,COG:G,RefSeq:WP_005689035.1,SO:0001217,UniParc:UPI000053E133,UniRef:UniRef100_A0A112VSH1,UniRef:UniRef50_P44855,UniRef:UniRef90_P44855
contig_1	Pyrodigal	gene	872347	873681	.	+	.	ID=GCA000012185_00881_gene;locus_tag=GCA000012185_00881;gene=ndh
contig_1	Pyrodigal	CDS	872347	873681	.	+	0	ID=GCA000012185_00881;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000012185_00881;product=Type II NADH:quinone oxidoreductase;Dbxref=GO:0005886,GO:0008137,GO:0050136;gene=ndh;Parent=GCA000012185_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_005693148.1,SO:0001217,UniParc:UPI000012934C,UniRef:UniRef100_P44856,UniRef:UniRef50_P44856,UniRef:UniRef90_P44856;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	873761	876193	.	-	.	ID=GCA000012185_00882_gene;locus_tag=GCA000012185_00882;gene=plsB
contig_1	Pyrodigal	CDS	873761	876193	.	-	0	ID=GCA000012185_00882;Name=glycerol-3-phosphate 1-O-acyltransferase PlsB;locus_tag=GCA000012185_00882;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;Dbxref=GO:0004366,GO:0005886,GO:0006631,GO:0008654,GO:0016024;gene=plsB;Parent=GCA000012185_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2937,COG:I,KEGG:K00631,RefSeq:WP_011272204.1,SO:0001217,UniParc:UPI000053E134,UniRef:UniRef100_Q4QMF0,UniRef:UniRef50_P44857,UniRef:UniRef90_P44857;ec_number=2.3.1.15
contig_1	Pyrodigal	gene	876448	877071	.	+	.	ID=GCA000012185_00883_gene;locus_tag=GCA000012185_00883;gene=lexA
contig_1	Pyrodigal	CDS	876448	877071	.	+	0	ID=GCA000012185_00883;Name=transcriptional repressor LexA;locus_tag=GCA000012185_00883;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0009432,GO:0045892;gene=lexA;Parent=GCA000012185_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_005648504.1,SO:0001217,UniParc:UPI000039A944,UniRef:UniRef100_Q4QME9,UniRef:UniRef50_P44858,UniRef:UniRef90_P44858;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	877214	878038	.	+	.	ID=GCA000012185_00884_gene;locus_tag=GCA000012185_00884;gene=dapF
contig_1	Pyrodigal	CDS	877214	878038	.	+	0	ID=GCA000012185_00884;Name=diaminopimelate epimerase;locus_tag=GCA000012185_00884;product=diaminopimelate epimerase;Dbxref=GO:0005829,GO:0008837,GO:0009089;gene=dapF;Parent=GCA000012185_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01778,RefSeq:WP_005655521.1,SO:0001217,UniParc:UPI0000128EB2,UniRef:UniRef100_P44859,UniRef:UniRef50_P0A6K1,UniRef:UniRef90_P44859;ec_number=5.1.1.7
contig_1	Pyrodigal	gene	878258	878755	.	-	.	ID=GCA000012185_00885_gene;locus_tag=GCA000012185_00885;gene=tpx
contig_1	Pyrodigal	CDS	878258	878755	.	-	0	ID=GCA000012185_00885;Name=thiol peroxidase;locus_tag=GCA000012185_00885;product=thiol peroxidase;Dbxref=GO:0008379,GO:0016684;gene=tpx;Parent=GCA000012185_00885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_005655523.1,SO:0001217,UniParc:UPI000053E136,UniRef:UniRef100_A0A0H3PEE9,UniRef:UniRef50_P0A862,UniRef:UniRef90_Q57549;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	879387	883280	.	+	.	ID=GCA000012185_00886_gene;locus_tag=GCA000012185_00886;gene=purL
contig_1	Pyrodigal	CDS	879387	883280	.	+	0	ID=GCA000012185_00886;Name=phosphoribosylformylglycinamidine synthase;locus_tag=GCA000012185_00886;product=phosphoribosylformylglycinamidine synthase;Dbxref=GO:0004642,GO:0005524,GO:0005737,GO:0006164,GO:0006189,GO:0046872;gene=purL;Parent=GCA000012185_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0047,COG:F,RefSeq:WP_005655525.1,SO:0001217,UniParc:UPI0000E8AC0C,UniRef:UniRef100_Q4QME6,UniRef:UniRef50_P15254,UniRef:UniRef90_P43847;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	883786	884529	.	+	.	ID=GCA000012185_00887_gene;locus_tag=GCA000012185_00887
contig_1	Pyrodigal	CDS	883786	884529	.	+	0	ID=GCA000012185_00887;Name=Glycosyltransferase family 25 protein;locus_tag=GCA000012185_00887;product=Glycosyltransferase family 25 protein;Parent=GCA000012185_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005655529.1,SO:0001217,UniParc:UPI000039AA11,UniRef:UniRef100_A0A0H3PNV2,UniRef:UniRef90_C1J7J7
contig_1	Pyrodigal	gene	884590	885432	.	-	.	ID=GCA000012185_00888_gene;locus_tag=GCA000012185_00888;gene=yibQ
contig_1	Pyrodigal	CDS	884590	885432	.	-	0	ID=GCA000012185_00888;Name=Polysaccharide deacetylase;locus_tag=GCA000012185_00888;product=Polysaccharide deacetylase;gene=yibQ;Parent=GCA000012185_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2861,COG:G,KEGG:K09798,RefSeq:WP_005655533.1,SO:0001217,UniParc:UPI000053E138,UniRef:UniRef100_A0A0H3PFV2,UniRef:UniRef50_P44863,UniRef:UniRef90_A0A0M1GLW3
contig_1	Pyrodigal	gene	885432	886664	.	-	.	ID=GCA000012185_00889_gene;locus_tag=GCA000012185_00889;gene=envC
contig_1	Pyrodigal	CDS	885432	886664	.	-	0	ID=GCA000012185_00889;Name=murein hydrolase activator EnvC;locus_tag=GCA000012185_00889;product=murein hydrolase activator EnvC;Dbxref=GO:0000920,GO:0004222;gene=envC;Parent=GCA000012185_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4942,COG:D,RefSeq:WP_011272206.1,SO:0001217,UniParc:UPI00003CDBC3,UniRef:UniRef100_Q4QME3,UniRef:UniRef50_P44864,UniRef:UniRef90_P44864
contig_1	Pyrodigal	gene	886840	887523	.	+	.	ID=GCA000012185_00890_gene;locus_tag=GCA000012185_00890;gene=gpmA
contig_1	Pyrodigal	CDS	886840	887523	.	+	0	ID=GCA000012185_00890;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA000012185_00890;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;Dbxref=GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000012185_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_005652337.1,SO:0001217,UniParc:UPI000039A4C1,UniRef:UniRef100_Q4QME2,UniRef:UniRef50_Q9CIM0,UniRef:UniRef90_P44865;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	887601	887813	.	-	.	ID=GCA000012185_00891_gene;locus_tag=GCA000012185_00891;gene=rpmE
contig_1	Pyrodigal	CDS	887601	887813	.	-	0	ID=GCA000012185_00891;Name=50S ribosomal protein L31;locus_tag=GCA000012185_00891;product=50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0046872,GO:1990904;gene=rpmE;Parent=GCA000012185_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_011272207.1,SO:0001217,UniParc:UPI00003CDBBB,UniRef:UniRef100_Q4QME1,UniRef:UniRef50_P0A7M9,UniRef:UniRef90_P44367
contig_1	Infernal	regulatory_region	887820	887870	8.1e-08	-	.	ID=JPLKGDNPJF_111;Name=L31-Gammaproteobacteria ribosomal protein leader;product=L31-Gammaproteobacteria ribosomal protein leader;Dbxref=RFAM:RF03157;inference=profile:Rfam:RF03157;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	887990	889126	.	+	.	ID=GCA000012185_00892_gene;locus_tag=GCA000012185_00892;gene=mutY
contig_1	Pyrodigal	CDS	887990	889126	.	+	0	ID=GCA000012185_00892;Name=A/G-specific adenine glycosylase;locus_tag=GCA000012185_00892;product=A/G-specific adenine glycosylase;Dbxref=GO:0000701,GO:0006281,GO:0006284,GO:0006298,GO:0019104,GO:0032357,GO:0034039,GO:0035485,GO:0046872,GO:0051539;gene=mutY;Parent=GCA000012185_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,KEGG:K03575,RefSeq:WP_011272208.1,SO:0001217,UniParc:UPI000053E139,UniRef:UniRef100_Q4QME0,UniRef:UniRef50_P44320,UniRef:UniRef90_P44320;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	889104	889376	.	+	.	ID=GCA000012185_00893_gene;locus_tag=GCA000012185_00893;gene=yggX
contig_1	Pyrodigal	CDS	889104	889376	.	+	0	ID=GCA000012185_00893;Name=oxidative damage protection protein;locus_tag=GCA000012185_00893;product=oxidative damage protection protein;Dbxref=GO:0005506,GO:0005829,GO:0034599;gene=yggX;Parent=GCA000012185_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2924,COG:PO,RefSeq:WP_005648477.1,SO:0001217,UniParc:UPI000013B0A4,UniRef:UniRef100_P44048,UniRef:UniRef50_B4EUQ7,UniRef:UniRef90_P44048
contig_1	Pyrodigal	gene	889391	890464	.	+	.	ID=GCA000012185_00894_gene;locus_tag=GCA000012185_00894;gene=mltC
contig_1	Pyrodigal	CDS	889391	890464	.	+	0	ID=GCA000012185_00894;Name=membrane-bound lytic murein transglycosylase MltC;locus_tag=GCA000012185_00894;product=membrane-bound lytic murein transglycosylase MltC;Dbxref=GO:0000270,GO:0008933,GO:0009279,GO:0016020,GO:0016798,GO:0016998,GO:0071555;gene=mltC;Parent=GCA000012185_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,RefSeq:WP_011272209.1,SO:0001217,UniParc:UPI000053E13A,UniRef:UniRef100_Q4QMD8,UniRef:UniRef50_Q9CLB8,UniRef:UniRef90_P44049;ec_number=4.2.2.n1
contig_1	tRNAscan-SE	gene	890703	890778	.	+	.	ID=GCA000012185_00895_gene;locus_tag=GCA000012185_00895;gene=trnF
contig_1	tRNAscan-SE	tRNA	890703	890778	.	+	.	ID=GCA000012185_00895;Name=tRNA-Phe(gaa);locus_tag=GCA000012185_00895;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000012185_00895_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	890781	890856	.	+	.	ID=GCA000012185_00896_gene;locus_tag=GCA000012185_00896;gene=trnN
contig_1	tRNAscan-SE	tRNA	890781	890856	.	+	.	ID=GCA000012185_00896;Name=tRNA-Asn(gtt);locus_tag=GCA000012185_00896;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000012185_00896_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	891075	891755	.	-	.	ID=GCA000012185_00897_gene;locus_tag=GCA000012185_00897
contig_1	Pyrodigal	CDS	891075	891755	.	-	0	ID=GCA000012185_00897;Name=putative protein HI_0762;locus_tag=GCA000012185_00897;product=putative protein HI_0762;Dbxref=GO:0016787;Parent=GCA000012185_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2129,COG:R,RefSeq:WP_011272210.1,SO:0001217,UniParc:UPI00003CDADD,UniRef:UniRef100_Q4QMD7,UniRef:UniRef50_P44050,UniRef:UniRef90_P44050
contig_1	Pyrodigal	gene	891752	892975	.	-	.	ID=GCA000012185_00898_gene;locus_tag=GCA000012185_00898;gene=nadR
contig_1	Pyrodigal	CDS	891752	892975	.	-	0	ID=GCA000012185_00898;Name=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;locus_tag=GCA000012185_00898;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;Dbxref=GO:0000309,GO:0003677,GO:0005524,GO:0005737,GO:0005886,GO:0009058,GO:0009435,GO:0050262;gene=nadR;Parent=GCA000012185_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06211,RefSeq:WP_013526289.1,SO:0001217,UniParc:UPI000039A4BD,UniRef:UniRef100_Q4QMD6,UniRef:UniRef50_P44308,UniRef:UniRef90_P44308;ec_number=2.7.7.1
contig_1	Infernal	regulatory_region	892970	893147	1.1e-18	+	.	ID=JPLKGDNPJF_98;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	893236	893883	.	+	.	ID=GCA000012185_00899_gene;locus_tag=GCA000012185_00899;gene=ribB
contig_1	Pyrodigal	CDS	893236	893883	.	+	0	ID=GCA000012185_00899;Name=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;locus_tag=GCA000012185_00899;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;Dbxref=GO:0000287,GO:0005829,GO:0008686,GO:0009231,GO:0030145;gene=ribB;Parent=GCA000012185_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0108,COG:H,RefSeq:WP_011272212.1,SO:0001217,UniParc:UPI000053E13C,UniRef:UniRef100_Q4QMD5,UniRef:UniRef50_P44866,UniRef:UniRef90_P44866;ec_number=4.1.99.12
contig_1	Pyrodigal	gene	893910	894746	.	+	.	ID=GCA000012185_00900_gene;locus_tag=GCA000012185_00900;gene=lpsA
contig_1	Pyrodigal	CDS	893910	894746	.	+	0	ID=GCA000012185_00900;Name=glycosyltransferase;locus_tag=GCA000012185_00900;product=glycosyltransferase;Dbxref=GO:0016757;gene=lpsA;Parent=GCA000012185_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174782.1,SO:0001217,UniParc:UPI00003CDA59,UniRef:UniRef100_Q4QMD4,UniRef:UniRef50_Q57125,UniRef:UniRef90_Q57125,VFDB:VFC0258,VFDB:VFG013342;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	894795	895277	.	-	.	ID=GCA000012185_00901_gene;locus_tag=GCA000012185_00901;gene=trmL
contig_1	Pyrodigal	CDS	894795	895277	.	-	0	ID=GCA000012185_00901;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA000012185_00901;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0001510,GO:0002131,GO:0002132,GO:0003723,GO:0005737,GO:0008173,GO:0042802,GO:0141098,GO:0141102;gene=trmL;Parent=GCA000012185_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_005666214.1,SO:0001217,UniParc:UPI000039A4BA,UniRef:UniRef100_Q4QMD3,UniRef:UniRef50_P44868,UniRef:UniRef90_P44868;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	895287	895868	.	-	.	ID=GCA000012185_00902_gene;locus_tag=GCA000012185_00902;gene=rsmD
contig_1	Pyrodigal	CDS	895287	895868	.	-	0	ID=GCA000012185_00902;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA000012185_00902;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0003676,GO:0031167,GO:0052913;gene=rsmD;Parent=GCA000012185_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,KEGG:K08316,RefSeq:WP_011272214.1,SO:0001217,UniParc:UPI00003CDA5A,UniRef:UniRef100_Q4QMD2,UniRef:UniRef50_P44869,UniRef:UniRef90_P44869;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	895965	897167	.	+	.	ID=GCA000012185_00903_gene;locus_tag=GCA000012185_00903;gene=ftsY
contig_1	Pyrodigal	CDS	895965	897167	.	+	0	ID=GCA000012185_00903;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000012185_00903;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0005525,GO:0005737,GO:0005886,GO:0006605,GO:0006614,GO:0009306,GO:0016887;gene=ftsY;Parent=GCA000012185_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0552,COG:U,KEGG:K03110,RefSeq:WP_005652357.1,SO:0001217,UniParc:UPI00014FB783,UniRef:UniRef100_Q4QMD1,UniRef:UniRef50_P44870,UniRef:UniRef90_P44870;ec_number=3.6.5.4
contig_1	Pyrodigal	gene	897186	897842	.	+	.	ID=GCA000012185_00904_gene;locus_tag=GCA000012185_00904;gene=ftsE
contig_1	Pyrodigal	CDS	897186	897842	.	+	0	ID=GCA000012185_00904;Name=cell division ATP-binding protein FtsE;locus_tag=GCA000012185_00904;product=cell division ATP-binding protein FtsE;Dbxref=GO:0000910,GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0051301,GO:0055085;gene=ftsE;Parent=GCA000012185_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2884,COG:D,RefSeq:WP_011272216.1,SO:0001217,UniParc:UPI000053E13F,UniRef:UniRef100_Q4QMD0,UniRef:UniRef50_P44871,UniRef:UniRef90_P44871
contig_1	Pyrodigal	gene	897852	898784	.	+	.	ID=GCA000012185_00905_gene;locus_tag=GCA000012185_00905;gene=ftsX
contig_1	Pyrodigal	CDS	897852	898784	.	+	0	ID=GCA000012185_00905;Name=permease-like cell division protein FtsX;locus_tag=GCA000012185_00905;product=permease-like cell division protein FtsX;Dbxref=GO:0000910,GO:0005886,GO:0009276,GO:0016020,GO:0032153,GO:0051301;gene=ftsX;Parent=GCA000012185_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2177,COG:D,RefSeq:WP_011272217.1,SO:0001217,UniParc:UPI00003CD819,UniRef:UniRef100_Q4QMC9,UniRef:UniRef50_P44872,UniRef:UniRef90_P44872
contig_1	Pyrodigal	gene	898879	900060	.	-	.	ID=GCA000012185_00906_gene;locus_tag=GCA000012185_00906;gene=atoB
contig_1	Pyrodigal	CDS	898879	900060	.	-	0	ID=GCA000012185_00906;Name=Acetyl-CoA acetyltransferase;locus_tag=GCA000012185_00906;product=Acetyl-CoA acetyltransferase;Dbxref=GO:0003985,GO:0005737,GO:0006631;gene=atoB;Parent=GCA000012185_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_005655567.1,SO:0001217,UniParc:UPI00003CD818,UniRef:UniRef100_A0A0H3PEG2,UniRef:UniRef50_P44873,UniRef:UniRef90_P44873;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	900075	901418	.	-	.	ID=GCA000012185_00907_gene;locus_tag=GCA000012185_00907;gene=atoE
contig_1	Pyrodigal	CDS	900075	901418	.	-	0	ID=GCA000012185_00907;Name=Putative short-chain fatty acid transporter;locus_tag=GCA000012185_00907;product=Putative short-chain fatty acid transporter;Dbxref=GO:0005886;gene=atoE;Parent=GCA000012185_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2031,COG:I,KEGG:K02106,RefSeq:WP_005660147.1,SO:0001217,UniParc:UPI000053E140,UniRef:UniRef100_A0A2S9S534,UniRef:UniRef50_P76460,UniRef:UniRef90_P44051
contig_1	Pyrodigal	gene	901421	902086	.	-	.	ID=GCA000012185_00908_gene;locus_tag=GCA000012185_00908;gene=atoA
contig_1	Pyrodigal	CDS	901421	902086	.	-	0	ID=GCA000012185_00908;Name=Acetate CoA-transferase subunit beta;locus_tag=GCA000012185_00908;product=Acetate CoA-transferase subunit beta;Dbxref=GO:0008775,GO:0046459;gene=atoA;Parent=GCA000012185_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2057,COG:I,RefSeq:WP_005660145.1,SO:0001217,UniParc:UPI00003CD815,UniRef:UniRef100_A0A2X1RJ70,UniRef:UniRef50_P44874,UniRef:UniRef90_P44874;ec_number=2.8.3.8
contig_1	Pyrodigal	gene	902097	902750	.	-	.	ID=GCA000012185_00909_gene;locus_tag=GCA000012185_00909;gene=atoD
contig_1	Pyrodigal	CDS	902097	902750	.	-	0	ID=GCA000012185_00909;Name=acetate CoA-transferase subunit alpha;locus_tag=GCA000012185_00909;product=acetate CoA-transferase subunit alpha;Dbxref=GO:0008410,GO:0008775,GO:0046459;gene=atoD;Parent=GCA000012185_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1788,COG:I,RefSeq:WP_005648442.1,SO:0001217,UniParc:UPI000039AA21,UniRef:UniRef100_A0A0H3PNW5,UniRef:UniRef50_P44875,UniRef:UniRef90_P44875;ec_number=2.8.3.9
contig_1	Pyrodigal	gene	902998	903903	.	+	.	ID=GCA000012185_00910_gene;locus_tag=GCA000012185_00910
contig_1	Pyrodigal	CDS	902998	903903	.	+	0	ID=GCA000012185_00910;Name=putative HTH-type transcriptional regulator HI_0775;locus_tag=GCA000012185_00910;product=putative HTH-type transcriptional regulator HI_0775;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355;Parent=GCA000012185_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000019B2FB,UniRef:UniRef100_P44876,UniRef:UniRef50_P44876,UniRef:UniRef90_P44876
contig_1	Pyrodigal	gene	904140	904451	.	+	.	ID=GCA000012185_00911_gene;locus_tag=GCA000012185_00911;gene=rpsJ_V57L
contig_1	Pyrodigal	CDS	904140	904451	.	+	0	ID=GCA000012185_00911;Name=30S ribosomal protein S10;locus_tag=GCA000012185_00911;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ_V57L;Parent=GCA000012185_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001181005.1,SO:0001217,UniParc:UPI000005A7ED,UniRef:UniRef100_A8AQM1,UniRef:UniRef50_Q889X2,UniRef:UniRef90_A8AQM1
contig_1	Pyrodigal	gene	904468	905094	.	+	.	ID=GCA000012185_00912_gene;locus_tag=GCA000012185_00912;gene=rplC
contig_1	Pyrodigal	CDS	904468	905094	.	+	0	ID=GCA000012185_00912;Name=50S ribosomal protein L3;locus_tag=GCA000012185_00912;product=50S ribosomal protein L3;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000012185_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,KEGG:K02906,RefSeq:WP_005632753.1,SO:0001217,UniParc:UPI000013408C,UniRef:UniRef100_P44344,UniRef:UniRef50_Q7NQF2,UniRef:UniRef90_P44344
contig_1	Pyrodigal	gene	905110	905712	.	+	.	ID=GCA000012185_00913_gene;locus_tag=GCA000012185_00913;gene=rplD
contig_1	Pyrodigal	CDS	905110	905712	.	+	0	ID=GCA000012185_00913;Name=50S ribosomal protein L4;locus_tag=GCA000012185_00913;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000012185_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_005652369.1,SO:0001217,UniParc:UPI00001340EC,UniRef:UniRef100_P44345,UniRef:UniRef50_P44345,UniRef:UniRef90_P44345
contig_1	Pyrodigal	gene	905709	906008	.	+	.	ID=GCA000012185_00914_gene;locus_tag=GCA000012185_00914;gene=rplW
contig_1	Pyrodigal	CDS	905709	906008	.	+	0	ID=GCA000012185_00914;Name=50S ribosomal protein L23;locus_tag=GCA000012185_00914;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplW;Parent=GCA000012185_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_005632756.1,SO:0001217,UniParc:UPI0000133D97,UniRef:UniRef100_P44361,UniRef:UniRef50_P0ADZ0,UniRef:UniRef90_P44361
contig_1	Pyrodigal	gene	906026	906847	.	+	.	ID=GCA000012185_00915_gene;locus_tag=GCA000012185_00915;gene=rplB
contig_1	Pyrodigal	CDS	906026	906847	.	+	0	ID=GCA000012185_00915;Name=50S ribosomal protein L2;locus_tag=GCA000012185_00915;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000012185_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,RefSeq:WP_005652371.1,SO:0001217,UniParc:UPI00001685C5,UniRef:UniRef100_P44343,UniRef:UniRef50_P44343,UniRef:UniRef90_P44343
contig_1	Pyrodigal	gene	906873	907148	.	+	.	ID=GCA000012185_00916_gene;locus_tag=GCA000012185_00916;gene=rpsS
contig_1	Pyrodigal	CDS	906873	907148	.	+	0	ID=GCA000012185_00916;Name=30S ribosomal protein S19;locus_tag=GCA000012185_00916;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000012185_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_005539416.1,SO:0001217,UniParc:UPI0000164BD3,UniRef:UniRef100_P67899,UniRef:UniRef50_P21476,UniRef:UniRef90_P67899
contig_1	Pyrodigal	gene	907160	907492	.	+	.	ID=GCA000012185_00917_gene;locus_tag=GCA000012185_00917;gene=rplV
contig_1	Pyrodigal	CDS	907160	907492	.	+	0	ID=GCA000012185_00917;Name=50S ribosomal protein L22;locus_tag=GCA000012185_00917;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000012185_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_005625897.1,SO:0001217,UniParc:UPI0000133D6C,UniRef:UniRef100_P44360,UniRef:UniRef50_P44360,UniRef:UniRef90_P44360
contig_1	Pyrodigal	gene	907510	908217	.	+	.	ID=GCA000012185_00918_gene;locus_tag=GCA000012185_00918;gene=rpsC
contig_1	Pyrodigal	CDS	907510	908217	.	+	0	ID=GCA000012185_00918;Name=30S ribosomal protein S3;locus_tag=GCA000012185_00918;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000012185_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_005625894.1,SO:0001217,UniParc:UPI000039A4B3,UniRef:UniRef100_Q4QMB6,UniRef:UniRef50_P44372,UniRef:UniRef90_P44372
contig_1	Pyrodigal	gene	908231	908641	.	+	.	ID=GCA000012185_00919_gene;locus_tag=GCA000012185_00919;gene=rplP
contig_1	Pyrodigal	CDS	908231	908641	.	+	0	ID=GCA000012185_00919;Name=50S ribosomal protein L16;locus_tag=GCA000012185_00919;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000012185_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,KEGG:K02878,RefSeq:WP_005648425.1,SO:0001217,UniParc:UPI0000133C34,UniRef:UniRef100_P44354,UniRef:UniRef50_Q493K1,UniRef:UniRef90_P44354
contig_1	Pyrodigal	gene	908641	908832	.	+	.	ID=GCA000012185_00920_gene;locus_tag=GCA000012185_00920;gene=rpmC
contig_1	Pyrodigal	CDS	908641	908832	.	+	0	ID=GCA000012185_00920;Name=50S ribosomal protein L29;locus_tag=GCA000012185_00920;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000012185_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0255,COG:J,RefSeq:WP_005625888.1,SO:0001217,UniParc:UPI0000133E6C,UniRef:UniRef100_P44365,UniRef:UniRef50_P44365,UniRef:UniRef90_P44365
contig_1	Pyrodigal	gene	908832	909089	.	+	.	ID=GCA000012185_00921_gene;locus_tag=GCA000012185_00921;gene=rpsQ
contig_1	Pyrodigal	CDS	908832	909089	.	+	0	ID=GCA000012185_00921;Name=30S ribosomal protein S17;locus_tag=GCA000012185_00921;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000012185_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_005625886.1,SO:0001217,UniParc:UPI00001685C7,UniRef:UniRef100_P44383,UniRef:UniRef50_P44383,UniRef:UniRef90_P44383
contig_1	Pyrodigal	gene	909317	910102	.	+	.	ID=GCA000012185_00922_gene;locus_tag=GCA000012185_00922
contig_1	Pyrodigal	CDS	909317	910102	.	+	0	ID=GCA000012185_00922;Name=30S ribosomal protein S17;locus_tag=GCA000012185_00922;product=30S ribosomal protein S17;Parent=GCA000012185_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00014FCC00,UniRef:UniRef100_A0A7H5FUV4,UniRef:UniRef50_P44052,UniRef:UniRef90_A0A7H5FUV4
contig_1	Pyrodigal	gene	910383	910754	.	+	.	ID=GCA000012185_00923_gene;locus_tag=GCA000012185_00923;gene=rplN
contig_1	Pyrodigal	CDS	910383	910754	.	+	0	ID=GCA000012185_00923;Name=50S ribosomal protein L14;locus_tag=GCA000012185_00923;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000012185_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,KEGG:K02874,RefSeq:WP_005548786.1,SO:0001217,UniParc:UPI0000133BDA,UniRef:UniRef100_P66067,UniRef:UniRef50_P0ADY3,UniRef:UniRef90_P0ADY3
contig_1	Pyrodigal	gene	910765	911076	.	+	.	ID=GCA000012185_00924_gene;locus_tag=GCA000012185_00924;gene=rplX
contig_1	Pyrodigal	CDS	910765	911076	.	+	0	ID=GCA000012185_00924;Name=50S ribosomal protein L24;locus_tag=GCA000012185_00924;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplX;Parent=GCA000012185_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_005635734.1,SO:0001217,UniParc:UPI000039A4B1,UniRef:UniRef100_Q4QMB0,UniRef:UniRef50_P60624,UniRef:UniRef90_Q9CL41
contig_1	Pyrodigal	gene	911094	911633	.	+	.	ID=GCA000012185_00925_gene;locus_tag=GCA000012185_00925;gene=rplE
contig_1	Pyrodigal	CDS	911094	911633	.	+	0	ID=GCA000012185_00925;Name=50S ribosomal protein L5;locus_tag=GCA000012185_00925;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000012185_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_005625881.1,SO:0001217,UniParc:UPI00001685C8,UniRef:UniRef100_P44346,UniRef:UniRef50_Q5SHQ0,UniRef:UniRef90_P44346
contig_1	Pyrodigal	gene	911645	911950	.	+	.	ID=GCA000012185_00926_gene;locus_tag=GCA000012185_00926;gene=rpsN
contig_1	Pyrodigal	CDS	911645	911950	.	+	0	ID=GCA000012185_00926;Name=30S ribosomal protein S14;locus_tag=GCA000012185_00926;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000012185_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_005625879.1,SO:0001217,UniParc:UPI00001685C9,UniRef:UniRef100_P44381,UniRef:UniRef50_P0AG59,UniRef:UniRef90_P0AG59
contig_1	Pyrodigal	gene	911987	912379	.	+	.	ID=GCA000012185_00927_gene;locus_tag=GCA000012185_00927;gene=rpsH
contig_1	Pyrodigal	CDS	911987	912379	.	+	0	ID=GCA000012185_00927;Name=30S ribosomal protein S8;locus_tag=GCA000012185_00927;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA000012185_00927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_005625877.1,SO:0001217,UniParc:UPI00001685CA,UniRef:UniRef100_P44377,UniRef:UniRef50_Q9CL44,UniRef:UniRef90_Q9CL44
contig_1	Pyrodigal	gene	912395	912928	.	+	.	ID=GCA000012185_00928_gene;locus_tag=GCA000012185_00928;gene=rplF
contig_1	Pyrodigal	CDS	912395	912928	.	+	0	ID=GCA000012185_00928;Name=50S ribosomal protein L6;locus_tag=GCA000012185_00928;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000012185_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_005655593.1,SO:0001217,UniParc:UPI00001685CB,UniRef:UniRef100_P44347,UniRef:UniRef50_P44347,UniRef:UniRef90_P44347
contig_1	Pyrodigal	gene	912942	913295	.	+	.	ID=GCA000012185_00929_gene;locus_tag=GCA000012185_00929;gene=rplR
contig_1	Pyrodigal	CDS	912942	913295	.	+	0	ID=GCA000012185_00929;Name=50S ribosomal protein L18;locus_tag=GCA000012185_00929;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000012185_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_005625873.1,SO:0001217,UniParc:UPI0000133C6C,UniRef:UniRef100_P44356,UniRef:UniRef50_P44356,UniRef:UniRef90_P44356
contig_1	Pyrodigal	gene	913310	913810	.	+	.	ID=GCA000012185_00930_gene;locus_tag=GCA000012185_00930;gene=rpsE
contig_1	Pyrodigal	CDS	913310	913810	.	+	0	ID=GCA000012185_00930;Name=30S ribosomal protein S5;locus_tag=GCA000012185_00930;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000012185_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_005625871.1,SO:0001217,UniParc:UPI000013504E,UniRef:UniRef100_P44374,UniRef:UniRef50_Q9HWF2,UniRef:UniRef90_Q9CL47
contig_1	Pyrodigal	gene	913817	913996	.	+	.	ID=GCA000012185_00931_gene;locus_tag=GCA000012185_00931;gene=rpmD
contig_1	Pyrodigal	CDS	913817	913996	.	+	0	ID=GCA000012185_00931;Name=50S ribosomal protein L30;locus_tag=GCA000012185_00931;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000012185_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1841,COG:J,RefSeq:WP_005543631.1,SO:0001217,UniParc:UPI00000C6549,UniRef:UniRef100_Q9CL48,UniRef:UniRef50_P0AG51,UniRef:UniRef90_P44366
contig_1	Pyrodigal	gene	914000	914434	.	+	.	ID=GCA000012185_00932_gene;locus_tag=GCA000012185_00932;gene=rplO
contig_1	Pyrodigal	CDS	914000	914434	.	+	0	ID=GCA000012185_00932;Name=50S ribosomal protein L15;locus_tag=GCA000012185_00932;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000012185_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,KEGG:K02876,RefSeq:WP_011272219.1,SO:0001217,UniParc:UPI00003CDD36,UniRef:UniRef100_Q4QMA2,UniRef:UniRef50_Q9KP03,UniRef:UniRef90_Q4QMA2
contig_1	Pyrodigal	gene	914442	915767	.	+	.	ID=GCA000012185_00933_gene;locus_tag=GCA000012185_00933;gene=secY
contig_1	Pyrodigal	CDS	914442	915767	.	+	0	ID=GCA000012185_00933;Name=preprotein translocase subunit SecY;locus_tag=GCA000012185_00933;product=preprotein translocase subunit SecY;Dbxref=GO:0005048,GO:0005886,GO:0006616,GO:0008320,GO:0015031,GO:0016020,GO:0031522,GO:0043952;gene=secY;Parent=GCA000012185_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_011272220.1,SO:0001217,UniParc:UPI000053E142,UniRef:UniRef100_A0A2R3FXH7,UniRef:UniRef50_P43804,UniRef:UniRef90_P43804
contig_1	Pyrodigal	gene	915796	915909	.	+	.	ID=GCA000012185_00934_gene;locus_tag=GCA000012185_00934;gene=rpmJ
contig_1	Pyrodigal	CDS	915796	915909	.	+	0	ID=GCA000012185_00934;Name=50S ribosomal protein L36;locus_tag=GCA000012185_00934;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA000012185_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_005625868.1,SO:0001217,UniParc:UPI0000134024,UniRef:UniRef100_P46361,UniRef:UniRef50_P20278,UniRef:UniRef90_P46361
contig_1	Infernal	regulatory_region	915967	916081	2.3e-16	+	.	ID=JPLKGDNPJF_99;Name=Alpha operon ribosome binding site;product=Alpha operon ribosome binding site;Dbxref=RFAM:RF00140;inference=profile:Rfam:RF00140;Note=SO:0000139;regulatory_class=ribosome_binding_site
contig_1	Pyrodigal	gene	916049	916405	.	+	.	ID=GCA000012185_00935_gene;locus_tag=GCA000012185_00935;gene=rpsM
contig_1	Pyrodigal	CDS	916049	916405	.	+	0	ID=GCA000012185_00935;Name=30S ribosomal protein S13;locus_tag=GCA000012185_00935;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000012185_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_005648406.1,SO:0001217,UniParc:UPI000039A4B0,UniRef:UniRef100_Q4QMA0,UniRef:UniRef50_Q8DML1,UniRef:UniRef90_Q9CL51
contig_1	Pyrodigal	gene	916421	916810	.	+	.	ID=GCA000012185_00936_gene;locus_tag=GCA000012185_00936;gene=rpsK
contig_1	Pyrodigal	CDS	916421	916810	.	+	0	ID=GCA000012185_00936;Name=30S ribosomal protein S11;locus_tag=GCA000012185_00936;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000012185_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_005543603.1,SO:0001217,UniParc:UPI000039A4AF,UniRef:UniRef100_Q4QM99,UniRef:UniRef50_Q6N4V6,UniRef:UniRef90_P44379
contig_1	Pyrodigal	gene	916838	917458	.	+	.	ID=GCA000012185_00937_gene;locus_tag=GCA000012185_00937;gene=rpsD
contig_1	Pyrodigal	CDS	916838	917458	.	+	0	ID=GCA000012185_00937;Name=30S ribosomal protein S4;locus_tag=GCA000012185_00937;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000012185_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_005648404.1,SO:0001217,UniParc:UPI000039A4AE,UniRef:UniRef100_Q4QM98,UniRef:UniRef50_O54297,UniRef:UniRef90_P44373
contig_1	Pyrodigal	gene	917490	918476	.	+	.	ID=GCA000012185_00938_gene;locus_tag=GCA000012185_00938;gene=rpoA
contig_1	Pyrodigal	CDS	917490	918476	.	+	0	ID=GCA000012185_00938;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000012185_00938;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA000012185_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_005648402.1,SO:0001217,UniParc:UPI000039AA25,UniRef:UniRef100_Q4QM97,UniRef:UniRef50_P0A0Y1,UniRef:UniRef90_P43737;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	918517	918903	.	+	.	ID=GCA000012185_00939_gene;locus_tag=GCA000012185_00939;gene=rplQ
contig_1	Pyrodigal	CDS	918517	918903	.	+	0	ID=GCA000012185_00939;Name=50S ribosomal protein L17;locus_tag=GCA000012185_00939;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA000012185_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,KEGG:K02879,RefSeq:WP_005648400.1,SO:0001217,UniParc:UPI0000133C4B,UniRef:UniRef100_P44355,UniRef:UniRef50_P44355,UniRef:UniRef90_P44355
contig_1	Pyrodigal	gene	919030	919626	.	-	.	ID=GCA000012185_00940_gene;locus_tag=GCA000012185_00940;gene=crp
contig_1	Pyrodigal	CDS	919030	919626	.	-	0	ID=GCA000012185_00940;Name=cAMP regulatory protein;locus_tag=GCA000012185_00940;product=cAMP regulatory protein;gene=crp;Parent=GCA000012185_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,RefSeq:WP_005670086.1,SO:0001217,UniParc:UPI000039A4AC,UniRef:UniRef100_A0A2S9RFJ6,UniRef:UniRef50_A0A0D0H1F7,UniRef:UniRef90_A0A0D0H1F7
contig_1	Pyrodigal	gene	919745	920134	.	-	.	ID=GCA000012185_00941_gene;locus_tag=GCA000012185_00941
contig_1	Pyrodigal	CDS	919745	920134	.	-	0	ID=GCA000012185_00941;Name=4Fe4S-binding SPASM domain-containing protein;locus_tag=GCA000012185_00941;product=4Fe4S-binding SPASM domain-containing protein;Parent=GCA000012185_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAV2U146,UniRef:UniRef90_A0AAV2U146
contig_1	Pyrodigal	gene	920206	920445	.	-	.	ID=GCA000012185_00942_gene;locus_tag=GCA000012185_00942
contig_1	Pyrodigal	CDS	920206	920445	.	-	0	ID=GCA000012185_00942;Name=Anaerobic sulfatase maturase;locus_tag=GCA000012185_00942;product=Anaerobic sulfatase maturase;Parent=GCA000012185_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CDA2E,UniRef:UniRef100_A0A2R3G1U8,UniRef:UniRef50_A0A2R3G1U8,UniRef:UniRef90_A0A2R3G1U8
contig_1	Pyrodigal	gene	920579	921388	.	+	.	ID=GCA000012185_00943_gene;locus_tag=GCA000012185_00943;gene=tauE
contig_1	Pyrodigal	CDS	920579	921388	.	+	0	ID=GCA000012185_00943;Name=putative membrane transporter protein HI_0806;locus_tag=GCA000012185_00943;product=putative membrane transporter protein HI_0806;Dbxref=GO:0005886;gene=tauE;Parent=GCA000012185_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_011272221.1,SO:0001217,UniParc:UPI00003CDA2D,UniRef:UniRef100_A0AB37B906,UniRef:UniRef50_P44054,UniRef:UniRef90_P44054
contig_1	Pyrodigal	gene	921420	922613	.	-	.	ID=GCA000012185_00944_gene;locus_tag=GCA000012185_00944;gene=ispC
contig_1	Pyrodigal	CDS	921420	922613	.	-	0	ID=GCA000012185_00944;Name=1-deoxy-D-xylulose-5-phosphate reductoisomerase;locus_tag=GCA000012185_00944;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;Dbxref=GO:0005515,GO:0008299,GO:0030145,GO:0030604,GO:0046872,GO:0051484,GO:0070402;gene=ispC;Parent=GCA000012185_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0743,COG:I,KEGG:K00099,RefSeq:WP_011272222.1,SO:0001217,UniParc:UPI000053E143,UniRef:UniRef100_Q4QM93,UniRef:UniRef50_P45568,UniRef:UniRef90_P44055;ec_number=1.1.1.267
contig_1	Pyrodigal	gene	922723	923280	.	-	.	ID=GCA000012185_00945_gene;locus_tag=GCA000012185_00945;gene=frr
contig_1	Pyrodigal	CDS	922723	923280	.	-	0	ID=GCA000012185_00945;Name=ribosome recycling factor;locus_tag=GCA000012185_00945;product=ribosome recycling factor;Dbxref=GO:0002184,GO:0005829,GO:0006412,GO:0008135,GO:0043023;gene=frr;Parent=GCA000012185_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_005652401.1,SO:0001217,UniParc:UPI000039A4A8,UniRef:UniRef100_Q4QM92,UniRef:UniRef50_O82853,UniRef:UniRef90_Q4QM92
contig_1	Pyrodigal	gene	923432	925048	.	-	.	ID=GCA000012185_00946_gene;locus_tag=GCA000012185_00946;gene=pckA
contig_1	Pyrodigal	CDS	923432	925048	.	-	0	ID=GCA000012185_00946;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA000012185_00946;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA000012185_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,KEGG:K01610,RefSeq:WP_011272223.1,SO:0001217,UniParc:UPI000053E144,UniRef:UniRef100_Q4QM91,UniRef:UniRef50_Q5E1X3,UniRef:UniRef90_P43923;ec_number=4.1.1.49
contig_1	Pyrodigal	gene	925221	926102	.	-	.	ID=GCA000012185_00947_gene;locus_tag=GCA000012185_00947;gene=hslO
contig_1	Pyrodigal	CDS	925221	926102	.	-	0	ID=GCA000012185_00947;Name=Hsp33 family molecular chaperone HslO;locus_tag=GCA000012185_00947;product=Hsp33 family molecular chaperone HslO;Dbxref=GO:0005737,GO:0006457,GO:0042026,GO:0044183,GO:0051082;gene=hslO;Parent=GCA000012185_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1281,COG:O,KEGG:K04083,RefSeq:WP_005670099.1,SO:0001217,UniParc:UPI000053E145,UniRef:UniRef100_Q4QM90,UniRef:UniRef50_P44877,UniRef:UniRef90_P44877
contig_1	Pyrodigal	gene	926247	927620	.	-	.	ID=GCA000012185_00948_gene;locus_tag=GCA000012185_00948;gene=argH
contig_1	Pyrodigal	CDS	926247	927620	.	-	0	ID=GCA000012185_00948;Name=argininosuccinate lyase;locus_tag=GCA000012185_00948;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0042450;gene=argH;Parent=GCA000012185_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_011272224.1,SO:0001217,UniParc:UPI000053E146,UniRef:UniRef100_Q4QM89,UniRef:UniRef50_Q9K3D7,UniRef:UniRef90_P44314;ec_number=4.3.2.1
contig_1	Pyrodigal	gene	927755	928642	.	-	.	ID=GCA000012185_00949_gene;locus_tag=GCA000012185_00949;gene=galU
contig_1	Pyrodigal	CDS	927755	928642	.	-	0	ID=GCA000012185_00949;Name=glucosephosphate uridylyltransferase;locus_tag=GCA000012185_00949;product=glucosephosphate uridylyltransferase;Dbxref=GO:0003983,GO:0006011,GO:0009058;gene=galU;Parent=GCA000012185_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,KEGG:K00963,RefSeq:WP_005652408.1,SO:0001217,UniParc:UPI000039AA2D,UniRef:UniRef100_A0A0C5ETR1,UniRef:UniRef50_P0AEP3,UniRef:UniRef90_P44878,VFDB:VFC0258,VFDB:VFG013346;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	928664	928855	.	-	.	ID=GCA000012185_00950_gene;locus_tag=GCA000012185_00950;gene=csrA
contig_1	Pyrodigal	CDS	928664	928855	.	-	0	ID=GCA000012185_00950;Name=carbon storage regulator CsrA;locus_tag=GCA000012185_00950;product=carbon storage regulator CsrA;Dbxref=GO:0003723,GO:0005829,GO:0006109,GO:0006402,GO:0045947,GO:0045948,GO:0048027;gene=csrA;Parent=GCA000012185_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1551,COG:T,RefSeq:WP_005632782.1,SO:0001217,UniParc:UPI00001285B2,UniRef:UniRef100_P44879,UniRef:UniRef50_P44879,UniRef:UniRef90_P44879
contig_1	Pyrodigal	gene	928933	931557	.	-	.	ID=GCA000012185_00951_gene;locus_tag=GCA000012185_00951;gene=alaS
contig_1	Pyrodigal	CDS	928933	931557	.	-	0	ID=GCA000012185_00951;Name=alanine--tRNA ligase;locus_tag=GCA000012185_00951;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0045892;gene=alaS;Parent=GCA000012185_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,RefSeq:WP_011272225.1,SO:0001217,UniParc:UPI000053E147,UniRef:UniRef100_Q4QM86,UniRef:UniRef50_Q8ZBT8,UniRef:UniRef90_P43815;ec_number=6.1.1.7
contig_1	Pyrodigal	gene	931744	932169	.	-	.	ID=GCA000012185_00952_gene;locus_tag=GCA000012185_00952;gene=uspA
contig_1	Pyrodigal	CDS	931744	932169	.	-	0	ID=GCA000012185_00952;Name=universal stress protein UspA;locus_tag=GCA000012185_00952;product=universal stress protein UspA;Dbxref=GO:0005737;gene=uspA;Parent=GCA000012185_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_011272226.1,SO:0001217,UniParc:UPI000053E148,UniRef:UniRef100_A0A0Y7J412,UniRef:UniRef50_P44880,UniRef:UniRef90_P44880
contig_1	Pyrodigal	gene	932271	933563	.	-	.	ID=GCA000012185_00953_gene;locus_tag=GCA000012185_00953;gene=pepP
contig_1	Pyrodigal	CDS	932271	933563	.	-	0	ID=GCA000012185_00953;Name=Xaa-Pro aminopeptidase;locus_tag=GCA000012185_00953;product=Xaa-Pro aminopeptidase;Dbxref=GO:0004177,GO:0005829,GO:0006508,GO:0030145,GO:0070006;gene=pepP;Parent=GCA000012185_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_011272227.1,SO:0001217,UniParc:UPI000053E149,UniRef:UniRef100_Q4QM84,UniRef:UniRef50_P44881,UniRef:UniRef90_P44881;ec_number=3.4.11.9
contig_1	Pyrodigal	gene	933575	934123	.	-	.	ID=GCA000012185_00954_gene;locus_tag=GCA000012185_00954;gene=ygfB
contig_1	Pyrodigal	CDS	933575	934123	.	-	0	ID=GCA000012185_00954;Name=UPF0149 protein CGSHiEE_07975;locus_tag=GCA000012185_00954;product=UPF0149 protein CGSHiEE_07975;Dbxref=GO:0005829;gene=ygfB;Parent=GCA000012185_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3079,COG:S,KEGG:K09895,RefSeq:WP_005686021.1,SO:0001217,UniParc:UPI000053E14A,UniRef:UniRef100_Q4QM83,UniRef:UniRef50_P44882,UniRef:UniRef90_P44882
contig_1	Pyrodigal	gene	934294	935316	.	-	.	ID=GCA000012185_00955_gene;locus_tag=GCA000012185_00955;gene=galM
contig_1	Pyrodigal	CDS	934294	935316	.	-	0	ID=GCA000012185_00955;Name=galactose-1-epimerase;locus_tag=GCA000012185_00955;product=galactose-1-epimerase;Dbxref=GO:0004034,GO:0005737,GO:0006006,GO:0006012,GO:0030246,GO:0033499;gene=galM;Parent=GCA000012185_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_041174745.1,SO:0001217,UniParc:UPI00031AC2CB,UniRef:UniRef100_Q4QM82,UniRef:UniRef50_P31765,UniRef:UniRef90_P31765;ec_number=5.1.3.3
contig_1	Pyrodigal	gene	935326	936480	.	-	.	ID=GCA000012185_00956_gene;locus_tag=GCA000012185_00956;gene=galK
contig_1	Pyrodigal	CDS	935326	936480	.	-	0	ID=GCA000012185_00956;Name=galactokinase;locus_tag=GCA000012185_00956;product=galactokinase;Dbxref=GO:0000287,GO:0004335,GO:0005524,GO:0005829,GO:0006012,GO:0046835;gene=galK;Parent=GCA000012185_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0153,COG:G,KEGG:K00849,RefSeq:WP_038440339.1,SO:0001217,UniParc:UPI0002F6E2BD,UniRef:UniRef100_Q4QM81,UniRef:UniRef50_P31767,UniRef:UniRef90_P31767;ec_number=2.7.1.6
contig_1	Pyrodigal	gene	936557	937606	.	-	.	ID=GCA000012185_00957_gene;locus_tag=GCA000012185_00957;gene=galT
contig_1	Pyrodigal	CDS	936557	937606	.	-	0	ID=GCA000012185_00957;Name=galactose-1-phosphate uridylyltransferase;locus_tag=GCA000012185_00957;product=galactose-1-phosphate uridylyltransferase;Dbxref=GO:0005737,GO:0006012,GO:0008108,GO:0008270,GO:0033499;gene=galT;Parent=GCA000012185_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1085,COG:G,KEGG:K00965,RefSeq:WP_005666161.1,SO:0001217,UniParc:UPI000039AA33,UniRef:UniRef100_A0A0Y7J4F7,UniRef:UniRef50_P09148,UniRef:UniRef90_P31764;ec_number=2.7.7.12
contig_1	Pyrodigal	gene	937814	938812	.	+	.	ID=GCA000012185_00958_gene;locus_tag=GCA000012185_00958;gene=galR
contig_1	Pyrodigal	CDS	937814	938812	.	+	0	ID=GCA000012185_00958;Name=HTH-type transcriptional regulator GalR;locus_tag=GCA000012185_00958;product=HTH-type transcriptional regulator GalR;Dbxref=GO:0000976,GO:0003700,GO:0006012,GO:0006355;gene=galR;Parent=GCA000012185_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_005652428.1,SO:0001217,UniParc:UPI000053E14D,UniRef:UniRef100_A0A2V0RP40,UniRef:UniRef50_P31766,UniRef:UniRef90_P31766
contig_1	Pyrodigal	gene	938957	939952	.	+	.	ID=GCA000012185_00959_gene;locus_tag=GCA000012185_00959;gene=mglB
contig_1	Pyrodigal	CDS	938957	939952	.	+	0	ID=GCA000012185_00959;Name=galactose/glucose ABC transporter substrate-binding protein MglB;locus_tag=GCA000012185_00959;product=galactose/glucose ABC transporter substrate-binding protein MglB;Dbxref=GO:0030246,GO:0030288,GO:0046872;gene=mglB;Parent=GCA000012185_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005663075.1,SO:0001217,UniParc:UPI000039AA35,UniRef:UniRef100_A0A158SUX5,UniRef:UniRef50_P0AEE5,UniRef:UniRef90_P44883
contig_1	Pyrodigal	gene	940018	941538	.	+	.	ID=GCA000012185_00960_gene;locus_tag=GCA000012185_00960;gene=mglA
contig_1	Pyrodigal	CDS	940018	941538	.	+	0	ID=GCA000012185_00960;Name=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;locus_tag=GCA000012185_00960;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;Dbxref=GO:0005524,GO:0005886,GO:0008643,GO:0016020,GO:0016887,GO:0043211;gene=mglA;Parent=GCA000012185_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,KEGG:K10542,RefSeq:WP_005652432.1,SO:0001217,UniParc:UPI000012F05D,UniRef:UniRef100_P44884,UniRef:UniRef50_P0AAG8,UniRef:UniRef90_P44884;ec_number=7.5.2.11
contig_1	Pyrodigal	gene	941555	942565	.	+	.	ID=GCA000012185_00961_gene;locus_tag=GCA000012185_00961;gene=mglC
contig_1	Pyrodigal	CDS	941555	942565	.	+	0	ID=GCA000012185_00961;Name=galactose/methyl galactoside ABC transporter permease MglC;locus_tag=GCA000012185_00961;product=galactose/methyl galactoside ABC transporter permease MglC;Dbxref=GO:0005886,GO:0008643,GO:0016020,GO:0022857,GO:0055085;gene=mglC;Parent=GCA000012185_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4211,COG:G,KEGG:K10541,RefSeq:WP_005663072.1,SO:0001217,UniParc:UPI000053E14F,UniRef:UniRef100_A0A0D0H1D8,UniRef:UniRef50_P23200,UniRef:UniRef90_P44885
contig_1	Pyrodigal	gene	942711	943445	.	+	.	ID=GCA000012185_00962_gene;locus_tag=GCA000012185_00962
contig_1	Pyrodigal	CDS	942711	943445	.	+	0	ID=GCA000012185_00962;Name=putative protein HI_0825;locus_tag=GCA000012185_00962;product=putative protein HI_0825;Dbxref=GO:0005886;Parent=GCA000012185_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272231.1,SO:0001217,UniParc:UPI00003CDAA4,UniRef:UniRef100_A0AAJ8WAM5,UniRef:UniRef50_P44056,UniRef:UniRef90_P44056
contig_1	Pyrodigal	gene	943451	944008	.	+	.	ID=GCA000012185_00963_gene;locus_tag=GCA000012185_00963;gene=yciB
contig_1	Pyrodigal	CDS	943451	944008	.	+	0	ID=GCA000012185_00963;Name=septation protein A;locus_tag=GCA000012185_00963;product=septation protein A;Dbxref=GO:0005886;gene=yciB;Parent=GCA000012185_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2917,COG:D,KEGG:K06190,RefSeq:WP_011272232.1,SO:0001217,UniParc:UPI00003CDAA5,UniRef:UniRef100_Q4QM74,UniRef:UniRef50_P43810,UniRef:UniRef90_P43810
contig_1	Pyrodigal	gene	944008	944472	.	+	.	ID=GCA000012185_00964_gene;locus_tag=GCA000012185_00964;gene=yciA
contig_1	Pyrodigal	CDS	944008	944472	.	+	0	ID=GCA000012185_00964;Name=acyl-CoA thioester hydrolase YciA;locus_tag=GCA000012185_00964;product=acyl-CoA thioester hydrolase YciA;Dbxref=GO:0005737,GO:0005829,GO:0006637,GO:0009062,GO:0016790,GO:0052816;gene=yciA;Parent=GCA000012185_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_005652441.1,SO:0001217,UniParc:UPI000039AA37,UniRef:UniRef100_A0A0C5ETP9,UniRef:UniRef50_P44886,UniRef:UniRef90_P44886;ec_number=3.1.2.20
contig_1	Pyrodigal	gene	944489	944785	.	+	.	ID=GCA000012185_00965_gene;locus_tag=GCA000012185_00965;gene=yciI
contig_1	Pyrodigal	CDS	944489	944785	.	+	0	ID=GCA000012185_00965;Name=YciI family protein;locus_tag=GCA000012185_00965;product=YciI family protein;gene=yciI;Parent=GCA000012185_00965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2350,COG:QR,RefSeq:WP_005648344.1,SO:0001217,UniParc:UPI000013A6C1,UniRef:UniRef100_P44887,UniRef:UniRef50_P44887,UniRef:UniRef90_P44887
contig_1	Pyrodigal	gene	944801	946582	.	+	.	ID=GCA000012185_00966_gene;locus_tag=GCA000012185_00966;gene=slt
contig_1	Pyrodigal	CDS	944801	946582	.	+	0	ID=GCA000012185_00966;Name=Putative soluble lytic murein transglycosylase;locus_tag=GCA000012185_00966;product=Putative soluble lytic murein transglycosylase;Dbxref=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597,GO:0071555;gene=slt;Parent=GCA000012185_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,RefSeq:WP_011272233.1,SO:0001217,UniParc:UPI000053E150,UniRef:UniRef100_A0AAJ8WAM7,UniRef:UniRef50_P44888,UniRef:UniRef90_P44888;ec_number=4.2.2.n1
contig_1	Pyrodigal	gene	946620	946925	.	+	.	ID=GCA000012185_00967_gene;locus_tag=GCA000012185_00967;gene=trpR
contig_1	Pyrodigal	CDS	946620	946925	.	+	0	ID=GCA000012185_00967;Name=trp operon repressor;locus_tag=GCA000012185_00967;product=trp operon repressor;Dbxref=GO:0003700,GO:0005737,GO:0006355,GO:0043565,GO:0045892;gene=trpR;Parent=GCA000012185_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2973,COG:K,KEGG:K03720,RefSeq:WP_005629736.1,SO:0001217,UniParc:UPI0000137640,UniRef:UniRef100_P44889,UniRef:UniRef50_P44889,UniRef:UniRef90_P44889
contig_1	Pyrodigal	gene	947068	947652	.	+	.	ID=GCA000012185_00968_gene;locus_tag=GCA000012185_00968;gene=mtgA
contig_1	Pyrodigal	CDS	947068	947652	.	+	0	ID=GCA000012185_00968;Name=monofunctional biosynthetic peptidoglycan transglycosylase;locus_tag=GCA000012185_00968;product=monofunctional biosynthetic peptidoglycan transglycosylase;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0009274,GO:0016020,GO:0016763,GO:0071555;gene=mtgA;Parent=GCA000012185_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K03814,SO:0001217,UniParc:UPI000053E151,UniRef:UniRef100_A0AAJ8WQV9,UniRef:UniRef50_P44890,UniRef:UniRef90_P44890;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	947758	948102	.	-	.	ID=GCA000012185_00969_gene;locus_tag=GCA000012185_00969;gene=frdD
contig_1	Pyrodigal	CDS	947758	948102	.	-	0	ID=GCA000012185_00969;Name=fumarate reductase subunit FrdD;locus_tag=GCA000012185_00969;product=fumarate reductase subunit FrdD;Dbxref=GO:0000104,GO:0005886,GO:0006106;gene=frdD;Parent=GCA000012185_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3080,KEGG:K00247,RefSeq:WP_005690445.1,SO:0001217,UniParc:UPI000039A495,UniRef:UniRef100_Q4QM68,UniRef:UniRef50_P44891,UniRef:UniRef90_P44891;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	948115	948525	.	-	.	ID=GCA000012185_00970_gene;locus_tag=GCA000012185_00970;gene=frdC
contig_1	Pyrodigal	CDS	948115	948525	.	-	0	ID=GCA000012185_00970;Name=fumarate reductase subunit FrdC;locus_tag=GCA000012185_00970;product=fumarate reductase subunit FrdC;Dbxref=GO:0000104,GO:0005886,GO:0016020;gene=frdC;Parent=GCA000012185_00970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3029,KEGG:K00246,RefSeq:WP_011272235.1,SO:0001217,UniParc:UPI000053E152,UniRef:UniRef100_A0AAJ8WQS1,UniRef:UniRef50_P44892,UniRef:UniRef90_P44892;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	948536	949306	.	-	.	ID=GCA000012185_00971_gene;locus_tag=GCA000012185_00971;gene=frdB
contig_1	Pyrodigal	CDS	948536	949306	.	-	0	ID=GCA000012185_00971;Name=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;locus_tag=GCA000012185_00971;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;Dbxref=GO:0005886,GO:0006099,GO:0008177,GO:0009055,GO:0009061,GO:0016491,GO:0045283,GO:0046872,GO:0051536,GO:0051537,GO:0051538,GO:0051539;gene=frdB;Parent=GCA000012185_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0479,RefSeq:WP_005639269.1,SO:0001217,UniParc:UPI000012ABE3,UniRef:UniRef100_P44893,UniRef:UniRef50_P44893,UniRef:UniRef90_P44893;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	949299	951098	.	-	.	ID=GCA000012185_00972_gene;locus_tag=GCA000012185_00972;gene=frdA
contig_1	Pyrodigal	CDS	949299	951098	.	-	0	ID=GCA000012185_00972;Name=fumarate reductase (quinol) flavoprotein subunit;locus_tag=GCA000012185_00972;product=fumarate reductase (quinol) flavoprotein subunit;Dbxref=GO:0000104,GO:0005886,GO:0006113,GO:0008177,GO:0009055,GO:0009061,GO:0016491,GO:0022900,GO:0045283,GO:0050660;gene=frdA;Parent=GCA000012185_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,KEGG:K00244,RefSeq:WP_011272236.1,SO:0001217,UniParc:UPI000053E153,UniRef:UniRef100_A0AAJ8WQH7,UniRef:UniRef50_P00363,UniRef:UniRef90_P44894;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	951309	952280	.	+	.	ID=GCA000012185_00973_gene;locus_tag=GCA000012185_00973;gene=epmA
contig_1	Pyrodigal	CDS	951309	952280	.	+	0	ID=GCA000012185_00973;Name=elongation factor P--(R)-beta-lysine ligase;locus_tag=GCA000012185_00973;product=elongation factor P--(R)-beta-lysine ligase;Dbxref=GO:0000049,GO:0004812,GO:0004824,GO:0005524,GO:0005737,GO:0006418,GO:0006430,GO:0016880;gene=epmA;Parent=GCA000012185_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2269,COG:J,RefSeq:WP_005648321.1,SO:0001217,UniParc:UPI000039AA3B,UniRef:UniRef100_A5UHY5,UniRef:UniRef50_P0A8N7,UniRef:UniRef90_P43826;ec_number=6.3.1.-
contig_1	Pyrodigal	gene	952546	953229	.	-	.	ID=GCA000012185_00974_gene;locus_tag=GCA000012185_00974;gene=cpxR
contig_1	Pyrodigal	CDS	952546	953229	.	-	0	ID=GCA000012185_00974;Name=Transcriptional regulatory CpxR-like protein;locus_tag=GCA000012185_00974;product=Transcriptional regulatory CpxR-like protein;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=cpxR;Parent=GCA000012185_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_011272237.1,SO:0001217,UniParc:UPI00003CDCC0,UniRef:UniRef100_A0A0Y7J5H9,UniRef:UniRef50_P44895,UniRef:UniRef90_P44895
contig_1	Pyrodigal	gene	953283	953696	.	-	.	ID=GCA000012185_00975_gene;locus_tag=GCA000012185_00975;gene=bamE
contig_1	Pyrodigal	CDS	953283	953696	.	-	0	ID=GCA000012185_00975;Name=outer membrane protein assembly factor BamE;locus_tag=GCA000012185_00975;product=outer membrane protein assembly factor BamE;gene=bamE;Parent=GCA000012185_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2913,COG:M,KEGG:K06186,RefSeq:WP_011272238.1,SO:0001217,UniParc:UPI000053E155,UniRef:UniRef100_A0A2S9S5A3,UniRef:UniRef50_P44057,UniRef:UniRef90_A0A0H3PP33
contig_1	Pyrodigal	gene	953762	954778	.	-	.	ID=GCA000012185_00976_gene;locus_tag=GCA000012185_00976;gene=yejK
contig_1	Pyrodigal	CDS	953762	954778	.	-	0	ID=GCA000012185_00976;Name=nucleoid-associated protein YejK;locus_tag=GCA000012185_00976;product=nucleoid-associated protein YejK;Dbxref=GO:0003690,GO:0003727,GO:0005737,GO:0009295,GO:0043590;gene=yejK;Parent=GCA000012185_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3081,COG:L,KEGG:K06899,RefSeq:WP_005690461.1,SO:0001217,UniParc:UPI0001B87051,UniRef:UniRef100_Q4QM61,UniRef:UniRef50_Q65R92,UniRef:UniRef90_P44896
contig_1	Pyrodigal	gene	954904	955122	.	+	.	ID=GCA000012185_00977_gene;locus_tag=GCA000012185_00977;gene=yejL
contig_1	Pyrodigal	CDS	954904	955122	.	+	0	ID=GCA000012185_00977;Name=UPF0352 protein HI_0840;locus_tag=GCA000012185_00977;product=UPF0352 protein HI_0840;gene=yejL;Parent=GCA000012185_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3082,COG:S,KEGG:K09904,RefSeq:WP_005625990.1,SO:0001217,UniParc:UPI000039A48D,UniRef:UniRef100_Q4QM60,UniRef:UniRef50_P44897,UniRef:UniRef90_P44897
contig_1	Pyrodigal	gene	955124	956881	.	+	.	ID=GCA000012185_00978_gene;locus_tag=GCA000012185_00978;gene=yejM
contig_1	Pyrodigal	CDS	955124	956881	.	+	0	ID=GCA000012185_00978;Name=putative protein HI_0841;locus_tag=GCA000012185_00978;product=putative protein HI_0841;Dbxref=GO:0005886;gene=yejM;Parent=GCA000012185_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3083,COG:MT,KEGG:K07014,RefSeq:WP_011272240.1,SO:0001217,UniParc:UPI000053E157,UniRef:UniRef100_A0A0Y7J5J6,UniRef:UniRef50_P44898,UniRef:UniRef90_P44898
contig_1	Pyrodigal	gene	957079	958071	.	+	.	ID=GCA000012185_00979_gene;locus_tag=GCA000012185_00979;gene=ssnA
contig_1	Pyrodigal	CDS	957079	958071	.	+	0	ID=GCA000012185_00979;Name=putative protein HI_0843;locus_tag=GCA000012185_00979;product=putative protein HI_0843;gene=ssnA;Parent=GCA000012185_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0402,COG:FR,RefSeq:WP_005648312.1,SO:0001217,UniParc:UPI000039AA40,UniRef:UniRef100_P44059,UniRef:UniRef50_P44058,UniRef:UniRef90_P44059
contig_1	Pyrodigal	gene	958210	958788	.	-	.	ID=GCA000012185_00980_gene;locus_tag=GCA000012185_00980;gene=mobA
contig_1	Pyrodigal	CDS	958210	958788	.	-	0	ID=GCA000012185_00980;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA000012185_00980;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0003824,GO:0005525,GO:0005737,GO:0006777,GO:0016779,GO:0046872,GO:0061603,GO:1902758;gene=mobA;Parent=GCA000012185_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_011272241.1,SO:0001217,UniParc:UPI00003CD7BA,UniRef:UniRef100_Q4QM57,UniRef:UniRef50_P44899,UniRef:UniRef90_P44899;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	958853	959119	.	+	.	ID=GCA000012185_00981_gene;locus_tag=GCA000012185_00981;gene=yihD
contig_1	Pyrodigal	CDS	958853	959119	.	+	0	ID=GCA000012185_00981;Name=putative protein HI_0845;locus_tag=GCA000012185_00981;product=putative protein HI_0845;gene=yihD;Parent=GCA000012185_00981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3084,COG:S,KEGG:K09896,RefSeq:WP_005648308.1,SO:0001217,UniParc:UPI000039A489,UniRef:UniRef100_A0A0H3PG29,UniRef:UniRef50_P0ADP9,UniRef:UniRef90_P44900
contig_1	Pyrodigal	gene	959130	959747	.	+	.	ID=GCA000012185_00982_gene;locus_tag=GCA000012185_00982;gene=dsbA
contig_1	Pyrodigal	CDS	959130	959747	.	+	0	ID=GCA000012185_00982;Name=thiol:disulfide interchange protein DsbA;locus_tag=GCA000012185_00982;product=thiol:disulfide interchange protein DsbA;Dbxref=GO:0015036,GO:0042597;gene=dsbA;Parent=GCA000012185_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,KEGG:K03673,RefSeq:WP_005693196.1,SO:0001217,UniParc:UPI00001298BE,UniRef:UniRef100_P31810,UniRef:UniRef50_P31810,UniRef:UniRef90_P31810;ec_number=1.8.4.15
contig_1	Pyrodigal	gene	959809	960144	.	+	.	ID=GCA000012185_00983_gene;locus_tag=GCA000012185_00983;gene=yifE
contig_1	Pyrodigal	CDS	959809	960144	.	+	0	ID=GCA000012185_00983;Name=UPF0438 protein HI_0847;locus_tag=GCA000012185_00983;product=UPF0438 protein HI_0847;gene=yifE;Parent=GCA000012185_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3085,COG:S,KEGG:K09897,RefSeq:WP_005648303.1,SO:0001217,UniParc:UPI000013B3DA,UniRef:UniRef100_P31811,UniRef:UniRef50_P31811,UniRef:UniRef90_P31811
contig_1	Pyrodigal	gene	960288	961379	.	+	.	ID=GCA000012185_00984_gene;locus_tag=GCA000012185_00984;gene=trmA
contig_1	Pyrodigal	CDS	960288	961379	.	+	0	ID=GCA000012185_00984;Name=tRNA (uridine(54)-C5)-methyltransferase TrmA;locus_tag=GCA000012185_00984;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;Dbxref=GO:0000049,GO:0005829,GO:0006396,GO:0019843,GO:0030488,GO:0030697;gene=trmA;Parent=GCA000012185_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K00557,RefSeq:WP_005693197.1,SO:0001217,UniParc:UPI00001373FA,UniRef:UniRef100_P31812,UniRef:UniRef50_P23003,UniRef:UniRef90_P31812;ec_number=2.1.1.35
contig_1	Pyrodigal	gene	961361	962134	.	+	.	ID=GCA000012185_00985_gene;locus_tag=GCA000012185_00985;gene=rsmJ
contig_1	Pyrodigal	CDS	961361	962134	.	+	0	ID=GCA000012185_00985;Name=Ribosomal RNA small subunit methyltransferase J;locus_tag=GCA000012185_00985;product=Ribosomal RNA small subunit methyltransferase J;Dbxref=GO:0005737,GO:0008990;gene=rsmJ;Parent=GCA000012185_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15984,RefSeq:WP_038440334.1,SO:0001217,UniParc:UPI00003CD7BB,UniRef:UniRef100_Q4QM52,UniRef:UniRef50_P44901,UniRef:UniRef90_P44901;ec_number=2.1.1.242
contig_1	Pyrodigal	gene	962128	962562	.	+	.	ID=GCA000012185_00986_gene;locus_tag=GCA000012185_00986;gene=rseC
contig_1	Pyrodigal	CDS	962128	962562	.	+	0	ID=GCA000012185_00986;Name=putative protein HI_0850;locus_tag=GCA000012185_00986;product=putative protein HI_0850;Dbxref=GO:0005886;gene=rseC;Parent=GCA000012185_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3086,COG:T,KEGG:K03803,RefSeq:WP_005648296.1,SO:0001217,UniParc:UPI000039AA45,UniRef:UniRef100_A0A1Q5Y4K1,UniRef:UniRef50_P44060,UniRef:UniRef90_P44060
contig_1	Pyrodigal	gene	962984	963499	.	+	.	ID=GCA000012185_00987_gene;locus_tag=GCA000012185_00987;gene=mobB
contig_1	Pyrodigal	CDS	962984	963499	.	+	0	ID=GCA000012185_00987;Name=molybdopterin-guanine dinucleotide biosynthesis protein MobB;locus_tag=GCA000012185_00987;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;Dbxref=GO:0005525,GO:0006777;gene=mobB;Parent=GCA000012185_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_038440332.1,SO:0001217,UniParc:UPI00003CD7BD,UniRef:UniRef100_A0A2U9E3Q2,UniRef:UniRef50_P44902,UniRef:UniRef90_P44902
contig_1	Pyrodigal	gene	963496	964887	.	+	.	ID=GCA000012185_00988_gene;locus_tag=GCA000012185_00988;gene=hsrA
contig_1	Pyrodigal	CDS	963496	964887	.	+	0	ID=GCA000012185_00988;Name=putative transport protein HsrA;locus_tag=GCA000012185_00988;product=putative transport protein HsrA;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=hsrA;Parent=GCA000012185_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_011272244.1,SO:0001217,UniParc:UPI000053E15A,UniRef:UniRef100_A0A2S9S5G7,UniRef:UniRef50_P44903,UniRef:UniRef90_P44903
contig_1	Pyrodigal	gene	965034	966677	.	+	.	ID=GCA000012185_00989_gene;locus_tag=GCA000012185_00989;gene=hbpA
contig_1	Pyrodigal	CDS	965034	966677	.	+	0	ID=GCA000012185_00989;Name=Heme-binding protein A;locus_tag=GCA000012185_00989;product=Heme-binding protein A;Dbxref=GO:0015833,GO:0030288,GO:0042938,GO:0043190,GO:1904680;gene=hbpA;Parent=GCA000012185_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,KEGG:K12368,RefSeq:WP_038440331.1,SO:0001217,UniParc:UPI0002EDD0F8,UniRef:UniRef100_A0A346JSQ0,UniRef:UniRef50_P33950,UniRef:UniRef90_P33950
contig_1	Pyrodigal	gene	966853	967614	.	+	.	ID=GCA000012185_00990_gene;locus_tag=GCA000012185_00990;gene=hugZ
contig_1	Pyrodigal	CDS	966853	967614	.	+	0	ID=GCA000012185_00990;Name=HugZ family heme oxygenase;locus_tag=GCA000012185_00990;product=HugZ family heme oxygenase;Dbxref=GO:0004392,GO:0016627,GO:0042167,GO:0046872,GO:0070967;gene=hugZ;Parent=GCA000012185_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0748,COG:P,RefSeq:WP_005652481.1,SO:0001217,UniParc:UPI00003CD821,UniRef:UniRef100_A0A2R3FWT4,UniRef:UniRef50_P44061,UniRef:UniRef90_P44061;ec_number=1.14.99.-
contig_1	Pyrodigal	gene	967751	968098	.	-	.	ID=GCA000012185_00991_gene;locus_tag=GCA000012185_00991
contig_1	Pyrodigal	CDS	967751	968098	.	-	0	ID=GCA000012185_00991;Name=UPF0597 protein NTHI1023;locus_tag=GCA000012185_00991;product=UPF0597 protein NTHI1023;Dbxref=GO:0019450,GO:0080146;Parent=GCA000012185_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272246.1,SO:0001217,UniParc:UPI00003CD820,UniRef:UniRef100_Q4QM46,UniRef:UniRef50_Q4QM46,UniRef:UniRef90_Q4QM46
contig_1	Pyrodigal	gene	968113	970905	.	-	.	ID=GCA000012185_00992_gene;locus_tag=GCA000012185_00992;gene=polA
contig_1	Pyrodigal	CDS	968113	970905	.	-	0	ID=GCA000012185_00992;Name=DNA polymerase I;locus_tag=GCA000012185_00992;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0006302,GO:0008408,GO:0008409;gene=polA;Parent=GCA000012185_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_011272247.1,SO:0001217,UniParc:UPI000053E15C,UniRef:UniRef100_Q4QM45,UniRef:UniRef50_P00582,UniRef:UniRef90_P43741;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	971054	971356	.	+	.	ID=GCA000012185_00993_gene;locus_tag=GCA000012185_00993;gene=zapA
contig_1	Pyrodigal	CDS	971054	971356	.	+	0	ID=GCA000012185_00993;Name=Cell division protein ZapA;locus_tag=GCA000012185_00993;product=Cell division protein ZapA;Dbxref=GO:0000917,GO:0000921,GO:0005829,GO:0030428,GO:0032153,GO:0043093;gene=zapA;Parent=GCA000012185_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651366.1,SO:0001217,UniParc:UPI000013B07A,UniRef:UniRef100_P44062,UniRef:UniRef50_Q65VC6,UniRef:UniRef90_P44062
contig_1	Infernal	gene	971464	971661	.	+	.	ID=GCA000012185_00994_gene;locus_tag=GCA000012185_00994;gene=6S
contig_1	Infernal	ncRNA	971464	971661	6.3e-21	+	.	ID=GCA000012185_00994;Name=6S / SsrS RNA;locus_tag=GCA000012185_00994;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA000012185_00994_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013
contig_1	Pyrodigal	gene	971679	972242	.	+	.	ID=GCA000012185_00995_gene;locus_tag=GCA000012185_00995;gene=fAU1
contig_1	Pyrodigal	CDS	971679	972242	.	+	0	ID=GCA000012185_00995;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000012185_00995;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0005524,GO:0005737,GO:0006730,GO:0009396,GO:0030272,GO:0035999;gene=fAU1;Parent=GCA000012185_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,RefSeq:WP_011272248.1,SO:0001217,UniParc:UPI000053E15D,UniRef:UniRef100_A0A2S9S5B9,UniRef:UniRef50_P44905,UniRef:UniRef90_P44905;ec_number=6.3.3.2
contig_1	Pyrodigal	gene	972370	974940	.	+	.	ID=GCA000012185_00996_gene;locus_tag=GCA000012185_00996;gene=clpB
contig_1	Pyrodigal	CDS	972370	974940	.	+	0	ID=GCA000012185_00996;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000012185_00996;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026;gene=clpB;Parent=GCA000012185_00996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_011272249.1,SO:0001217,UniParc:UPI000039A47E,UniRef:UniRef100_A0A2S9SDI5,UniRef:UniRef50_Q6LMY0,UniRef:UniRef90_P44403
contig_1	Pyrodigal	gene	974978	975718	.	-	.	ID=GCA000012185_00997_gene;locus_tag=GCA000012185_00997;gene=rlmB
contig_1	Pyrodigal	CDS	974978	975718	.	-	0	ID=GCA000012185_00997;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000012185_00997;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0070039;gene=rlmB;Parent=GCA000012185_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_011272250.1,SO:0001217,UniParc:UPI00003CDA6F,UniRef:UniRef100_A0A2S9S5C1,UniRef:UniRef50_P44906,UniRef:UniRef90_P44906;ec_number=2.1.1.185
contig_1	Pyrodigal	gene	975774	978122	.	-	.	ID=GCA000012185_00998_gene;locus_tag=GCA000012185_00998;gene=rnr
contig_1	Pyrodigal	CDS	975774	978122	.	-	0	ID=GCA000012185_00998;Name=ribonuclease R;locus_tag=GCA000012185_00998;product=ribonuclease R;Dbxref=GO:0003723,GO:0004540,GO:0005829,GO:0006402,GO:0008859,GO:0016070;gene=rnr;Parent=GCA000012185_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_011272251.1,SO:0001217,UniParc:UPI00003CDA70,UniRef:UniRef100_Q4QM40,UniRef:UniRef50_P44907,UniRef:UniRef90_P44907;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	978314	979021	.	-	.	ID=GCA000012185_00999_gene;locus_tag=GCA000012185_00999;gene=yhhQ
contig_1	Pyrodigal	CDS	978314	979021	.	-	0	ID=GCA000012185_00999;Name=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;locus_tag=GCA000012185_00999;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;Dbxref=GO:0005886,GO:0022857,GO:1990397;gene=yhhQ;Parent=GCA000012185_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,KEGG:K09125,RefSeq:WP_005648239.1,SO:0001217,UniParc:UPI00003CDB67,UniRef:UniRef100_A0A0H3PP72,UniRef:UniRef50_P44908,UniRef:UniRef90_P44908
contig_1	Pyrodigal	gene	979214	979846	.	+	.	ID=GCA000012185_01000_gene;locus_tag=GCA000012185_01000;gene=pdxH
contig_1	Pyrodigal	CDS	979214	979846	.	+	0	ID=GCA000012185_01000;Name=pyridoxamine 5'-phosphate oxidase;locus_tag=GCA000012185_01000;product=pyridoxamine 5'-phosphate oxidase;Dbxref=GO:0004733,GO:0008615,GO:0010181,GO:0042823;gene=pdxH;Parent=GCA000012185_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0259,COG:H,RefSeq:WP_011272252.1,SO:0001217,UniParc:UPI00003CDB68,UniRef:UniRef100_Q4QM38,UniRef:UniRef50_P44909,UniRef:UniRef90_P44909;ec_number=1.4.3.5
contig_1	Pyrodigal	gene	979933	981783	.	-	.	ID=GCA000012185_01001_gene;locus_tag=GCA000012185_01001;gene=typA
contig_1	Pyrodigal	CDS	979933	981783	.	-	0	ID=GCA000012185_01001;Name=translational GTPase TypA;locus_tag=GCA000012185_01001;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA000012185_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_011272253.1,SO:0001217,UniParc:UPI000053E15F,UniRef:UniRef100_A5UI11,UniRef:UniRef50_Q9HU67,UniRef:UniRef90_A0A2S9S5D6
contig_1	Pyrodigal	gene	981910	982890	.	-	.	ID=GCA000012185_01002_gene;locus_tag=GCA000012185_01002
contig_1	Pyrodigal	CDS	981910	982890	.	-	0	ID=GCA000012185_01002;Name=putative protein HI_0352;locus_tag=GCA000012185_01002;product=putative protein HI_0352;Parent=GCA000012185_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12247,RefSeq:WP_011272254.1,SO:0001217,UniParc:UPI000053E160,UniRef:UniRef100_Q4QM36,UniRef:UniRef50_P24324,UniRef:UniRef90_P24324;ec_number=2.4.3.-
contig_1	Pyrodigal	gene	983047	984459	.	+	.	ID=GCA000012185_01003_gene;locus_tag=GCA000012185_01003;gene=glnA
contig_1	Pyrodigal	CDS	983047	984459	.	+	0	ID=GCA000012185_01003;Name=type I glutamate--ammonia ligase;locus_tag=GCA000012185_01003;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0006542,GO:0016020,GO:0019740,GO:0046872;gene=glnA;Parent=GCA000012185_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_011272255.1,SO:0001217,UniParc:UPI000053E161,UniRef:UniRef100_A0A2S9S5C7,UniRef:UniRef50_Q3V5W6,UniRef:UniRef90_P43794;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	984546	985589	.	+	.	ID=GCA000012185_01004_gene;locus_tag=GCA000012185_01004;gene=rfbB
contig_1	Pyrodigal	CDS	984546	985589	.	+	0	ID=GCA000012185_01004;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000012185_01004;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009225,GO:0019305;gene=rfbB;Parent=GCA000012185_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1088,COG:M,RefSeq:WP_011272256.1,SO:0001217,UniParc:UPI00003CD9B4,UniRef:UniRef100_A0A2S9S5C4,UniRef:UniRef50_A6YD33,UniRef:UniRef90_A6YD33;ec_number=4.2.1.46
contig_1	Pyrodigal	gene	985666	986970	.	+	.	ID=GCA000012185_01005_gene;locus_tag=GCA000012185_01005;gene=pepB
contig_1	Pyrodigal	CDS	985666	986970	.	+	0	ID=GCA000012185_01005;Name=aminopeptidase PepB;locus_tag=GCA000012185_01005;product=aminopeptidase PepB;Dbxref=GO:0005737,GO:0006508,GO:0008233,GO:0019538,GO:0030145,GO:0070006;gene=pepB;Parent=GCA000012185_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_011272257.1,SO:0001217,UniParc:UPI000053E162,UniRef:UniRef100_Q4QM33,UniRef:UniRef50_P58474,UniRef:UniRef90_P58474;ec_number=3.4.11.23
contig_1	Pyrodigal	gene	986980	987402	.	+	.	ID=GCA000012185_01006_gene;locus_tag=GCA000012185_01006;gene=ndk
contig_1	Pyrodigal	CDS	986980	987402	.	+	0	ID=GCA000012185_01006;Name=nucleoside-diphosphate kinase;locus_tag=GCA000012185_01006;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550,GO:0005524,GO:0005737,GO:0006163,GO:0006183,GO:0006220,GO:0006228,GO:0006241,GO:0046872;gene=ndk;Parent=GCA000012185_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_005648203.1,SO:0001217,UniParc:UPI00014F7D01,UniRef:UniRef100_Q4QM32,UniRef:UniRef50_P43802,UniRef:UniRef90_P43802;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	987472	988644	.	-	.	ID=GCA000012185_01007_gene;locus_tag=GCA000012185_01007;gene=cgtA
contig_1	Pyrodigal	CDS	987472	988644	.	-	0	ID=GCA000012185_01007;Name=Obg family GTPase CgtA;locus_tag=GCA000012185_01007;product=Obg family GTPase CgtA;Dbxref=GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=cgtA;Parent=GCA000012185_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0536,COG:DL,RefSeq:WP_005666077.1,SO:0001217,UniParc:UPI000039AA67,UniRef:UniRef100_Q4QM31,UniRef:UniRef50_P42641,UniRef:UniRef90_P44915;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	988672	989592	.	-	.	ID=GCA000012185_01008_gene;locus_tag=GCA000012185_01008;gene=rhaT
contig_1	Pyrodigal	CDS	988672	989592	.	-	0	ID=GCA000012185_01008;Name=putative transporter HI_0878;locus_tag=GCA000012185_01008;product=putative transporter HI_0878;Dbxref=GO:0005886,GO:0016020;gene=rhaT;Parent=GCA000012185_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_011272259.1,SO:0001217,UniParc:UPI00003CDB30,UniRef:UniRef100_A0A2X1RRW1,UniRef:UniRef50_P71360,UniRef:UniRef90_P71360
contig_1	Pyrodigal	gene	989672	989929	.	-	.	ID=GCA000012185_01009_gene;locus_tag=GCA000012185_01009;gene=rpmA
contig_1	Pyrodigal	CDS	989672	989929	.	-	0	ID=GCA000012185_01009;Name=50S ribosomal protein L27;locus_tag=GCA000012185_01009;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000012185_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_005539872.1,SO:0001217,UniParc:UPI000039A461,UniRef:UniRef100_Q4QM29,UniRef:UniRef50_P44363,UniRef:UniRef90_P44363
contig_1	Pyrodigal	gene	989950	990261	.	-	.	ID=GCA000012185_01010_gene;locus_tag=GCA000012185_01010;gene=rplU
contig_1	Pyrodigal	CDS	989950	990261	.	-	0	ID=GCA000012185_01010;Name=50S ribosomal protein L21;locus_tag=GCA000012185_01010;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA000012185_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,RefSeq:WP_005648192.1,SO:0001217,UniParc:UPI00003CDB2E,UniRef:UniRef100_Q4QM28,UniRef:UniRef50_Q65S54,UniRef:UniRef90_Q65S54
contig_1	Pyrodigal	gene	990474	991463	.	+	.	ID=GCA000012185_01011_gene;locus_tag=GCA000012185_01011;gene=ispB
contig_1	Pyrodigal	CDS	990474	991463	.	+	0	ID=GCA000012185_01011;Name=octaprenyl diphosphate synthase;locus_tag=GCA000012185_01011;product=octaprenyl diphosphate synthase;Dbxref=GO:0004659,GO:0008299,GO:0046872,GO:0106350;gene=ispB;Parent=GCA000012185_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,KEGG:K02523,RefSeq:WP_006995542.1,SO:0001217,UniParc:UPI000053E163,UniRef:UniRef100_A0A0C5EWB6,UniRef:UniRef50_P0AD57,UniRef:UniRef90_P44916;ec_number=2.5.1.90
contig_1	Pyrodigal	gene	991514	992251	.	+	.	ID=GCA000012185_01012_gene;locus_tag=GCA000012185_01012;gene=queH
contig_1	Pyrodigal	CDS	991514	992251	.	+	0	ID=GCA000012185_01012;Name=Epoxyqueuosine reductase QueH;locus_tag=GCA000012185_01012;product=Epoxyqueuosine reductase QueH;Dbxref=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queH;Parent=GCA000012185_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1636,COG:J,KEGG:K09765,RefSeq:WP_005648186.1,SO:0001217,UniParc:UPI000053E164,UniRef:UniRef100_A0A158SV62,UniRef:UniRef50_Q0I1Q0,UniRef:UniRef90_P44068;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	992311	993681	.	-	.	ID=GCA000012185_01013_gene;locus_tag=GCA000012185_01013;gene=alsT
contig_1	Pyrodigal	CDS	992311	993681	.	-	0	ID=GCA000012185_01013;Name=putative transporter HI_0883;locus_tag=GCA000012185_01013;product=putative transporter HI_0883;Dbxref=GO:0005283,GO:0005886;gene=alsT;Parent=GCA000012185_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_005648183.1,SO:0001217,UniParc:UPI000053E165,UniRef:UniRef100_A0A0D0IHC3,UniRef:UniRef50_P44917,UniRef:UniRef90_P44917
contig_1	Infernal	regulatory_region	993794	993904	2.1e-11	-	.	ID=JPLKGDNPJF_104;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	994081	994791	.	-	.	ID=GCA000012185_01014_gene;locus_tag=GCA000012185_01014;gene=arcA
contig_1	Pyrodigal	CDS	994081	994791	.	-	0	ID=GCA000012185_01014;Name=two-component system response regulator ArcA;locus_tag=GCA000012185_01014;product=two-component system response regulator ArcA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=arcA;Parent=GCA000012185_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,KEGG:K07773,RefSeq:WP_005659073.1,SO:0001217,UniParc:UPI000039A45C,UniRef:UniRef100_A0A0D0ILD4,UniRef:UniRef50_P44918,UniRef:UniRef90_P44918
contig_1	Pyrodigal	gene	994983	996722	.	+	.	ID=GCA000012185_01015_gene;locus_tag=GCA000012185_01015;gene=dsbD
contig_1	Pyrodigal	CDS	994983	996722	.	+	0	ID=GCA000012185_01015;Name=Thiol:disulfide interchange protein DsbD;locus_tag=GCA000012185_01015;product=Thiol:disulfide interchange protein DsbD;Dbxref=GO:0005886,GO:0009055,GO:0015035,GO:0017004,GO:0045454,GO:0047134;gene=dsbD;Parent=GCA000012185_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4232,COG:O,KEGG:K04084,RefSeq:WP_011272260.1,SO:0001217,UniParc:UPI000053E166,UniRef:UniRef100_Q4QM23,UniRef:UniRef50_P44919,UniRef:UniRef90_P44919;ec_number=1.8.1.8
contig_1	Pyrodigal	gene	996839	997243	.	+	.	ID=GCA000012185_01016_gene;locus_tag=GCA000012185_01016;gene=doxX
contig_1	Pyrodigal	CDS	996839	997243	.	+	0	ID=GCA000012185_01016;Name=putative protein HI_0886;locus_tag=GCA000012185_01016;product=putative protein HI_0886;Dbxref=GO:0005886;gene=doxX;Parent=GCA000012185_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_011272261.1,SO:0001217,UniParc:UPI00003CDC3B,UniRef:UniRef100_A0AB37B1F2,UniRef:UniRef50_P44069,UniRef:UniRef90_P44069
contig_1	Pyrodigal	gene	997432	999030	.	+	.	ID=GCA000012185_01017_gene;locus_tag=GCA000012185_01017;gene=purH
contig_1	Pyrodigal	CDS	997432	999030	.	+	0	ID=GCA000012185_01017;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000012185_01017;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003937,GO:0004643,GO:0005829,GO:0006189,GO:0009152;gene=purH;Parent=GCA000012185_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0138,COG:F,KEGG:K00602,RefSeq:WP_011272262.1,SO:0001217,UniParc:UPI000053E167,UniRef:UniRef100_Q4QM21,UniRef:UniRef50_P15639,UniRef:UniRef90_P43852;ec_number=3.5.4.10
contig_1	Pyrodigal	gene	999126	1000415	.	+	.	ID=GCA000012185_01018_gene;locus_tag=GCA000012185_01018;gene=purD
contig_1	Pyrodigal	CDS	999126	1000415	.	+	0	ID=GCA000012185_01018;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000012185_01018;product=Phosphoribosylamine--glycine ligase;gene=purD;Parent=GCA000012185_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0151,COG:F,RefSeq:WP_011272263.1,SO:0001217,UniParc:UPI000053E168,UniRef:UniRef100_A0A2S9S5E0,UniRef:UniRef50_Q7MGT4,UniRef:UniRef90_E6KYW9
contig_1	Pyrodigal	gene	1000571	1000741	.	+	.	ID=GCA000012185_01019_gene;locus_tag=GCA000012185_01019
contig_1	Pyrodigal	CDS	1000571	1000741	.	+	0	ID=GCA000012185_01019;Name=hypothetical protein;locus_tag=GCA000012185_01019;product=hypothetical protein;Parent=GCA000012185_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AB37B4K8
contig_1	Pyrodigal	gene	1000873	1002138	.	+	.	ID=GCA000012185_01020_gene;locus_tag=GCA000012185_01020
contig_1	Pyrodigal	CDS	1000873	1002138	.	+	0	ID=GCA000012185_01020;Name=Sulfatase N-terminal domain-containing protein;locus_tag=GCA000012185_01020;product=Sulfatase N-terminal domain-containing protein;Parent=GCA000012185_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1V3ISS0
contig_1	Pyrodigal	gene	1002261	1003526	.	+	.	ID=GCA000012185_01021_gene;locus_tag=GCA000012185_01021;gene=glyA
contig_1	Pyrodigal	CDS	1002261	1003526	.	+	0	ID=GCA000012185_01021;Name=Serine hydroxymethyltransferase;locus_tag=GCA000012185_01021;product=Serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005737,GO:0005829,GO:0019264,GO:0030170,GO:0035999,GO:0046653;gene=glyA;Parent=GCA000012185_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_011272264.1,SO:0001217,UniParc:UPI000053E169,UniRef:UniRef100_Q4QM19,UniRef:UniRef50_P43844,UniRef:UniRef90_P43844;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	1003597	1004217	.	+	.	ID=GCA000012185_01022_gene;locus_tag=GCA000012185_01022;gene=coaE
contig_1	Pyrodigal	CDS	1003597	1004217	.	+	0	ID=GCA000012185_01022;Name=dephospho-CoA kinase;locus_tag=GCA000012185_01022;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA000012185_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_038440314.1,SO:0001217,UniParc:UPI0000D89880,UniRef:UniRef100_Q4QM18,UniRef:UniRef50_P44920,UniRef:UniRef90_P44920;ec_number=2.7.1.24
contig_1	Pyrodigal	gene	1004210	1004416	.	+	.	ID=GCA000012185_01023_gene;locus_tag=GCA000012185_01023;gene=yacG
contig_1	Pyrodigal	CDS	1004210	1004416	.	+	0	ID=GCA000012185_01023;Name=DNA gyrase inhibitor YacG;locus_tag=GCA000012185_01023;product=DNA gyrase inhibitor YacG;Dbxref=GO:0006355,GO:0008270,GO:0008657;gene=yacG;Parent=GCA000012185_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3024,COG:L,RefSeq:WP_011272266.1,SO:0001217,UniParc:UPI00003CD750,UniRef:UniRef100_Q4QM17,UniRef:UniRef50_Q5E2R0,UniRef:UniRef90_P44921
contig_1	Pyrodigal	gene	1004534	1005781	.	+	.	ID=GCA000012185_01024_gene;locus_tag=GCA000012185_01024;gene=rhlB
contig_1	Pyrodigal	CDS	1004534	1005781	.	+	0	ID=GCA000012185_01024;Name=ATP-dependent RNA helicase RhlB;locus_tag=GCA000012185_01024;product=ATP-dependent RNA helicase RhlB;Dbxref=GO:0003676,GO:0003689,GO:0003723,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0016887,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=rhlB;Parent=GCA000012185_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_041174746.1,SO:0001217,UniParc:UPI00003CD74F,UniRef:UniRef100_Q4QM16,UniRef:UniRef50_P0A8J8,UniRef:UniRef90_P44922;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1006023	1006586	.	+	.	ID=GCA000012185_01025_gene;locus_tag=GCA000012185_01025;gene=acrR
contig_1	Pyrodigal	CDS	1006023	1006586	.	+	0	ID=GCA000012185_01025;Name=putative HTH-type transcriptional regulator HI_0893;locus_tag=GCA000012185_01025;product=putative HTH-type transcriptional regulator HI_0893;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=acrR;Parent=GCA000012185_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,KEGG:K18136,RefSeq:WP_011272268.1,SO:0001217,UniParc:UPI00003CD74E,UniRef:UniRef100_A8E0K2,UniRef:UniRef50_P44923,UniRef:UniRef90_P44923
contig_1	Pyrodigal	gene	1006618	1007814	.	+	.	ID=GCA000012185_01026_gene;locus_tag=GCA000012185_01026;gene=acrA
contig_1	Pyrodigal	CDS	1006618	1007814	.	+	0	ID=GCA000012185_01026;Name=putative protein HI_0894;locus_tag=GCA000012185_01026;product=putative protein HI_0894;Dbxref=GO:0015562,GO:1990281;gene=acrA;Parent=GCA000012185_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0845,COG:MV,RefSeq:WP_011272269.1,SO:0001217,UniParc:UPI00003CD74D,UniRef:UniRef100_A0AB34IAJ2,UniRef:UniRef50_Q57500,UniRef:UniRef90_Q57500
contig_1	Pyrodigal	gene	1007832	1010912	.	+	.	ID=GCA000012185_01027_gene;locus_tag=GCA000012185_01027;gene=acrB
contig_1	Pyrodigal	CDS	1007832	1010912	.	+	0	ID=GCA000012185_01027;Name=putative transporter HI_0895;locus_tag=GCA000012185_01027;product=putative transporter HI_0895;Dbxref=GO:0005886,GO:0042910;gene=acrB;Parent=GCA000012185_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_038440312.1,SO:0001217,UniParc:UPI0002DAB682,UniRef:UniRef100_A0A3E1QPY5,UniRef:UniRef50_Q57124,UniRef:UniRef90_Q57124
contig_1	Pyrodigal	gene	1011147	1011917	.	+	.	ID=GCA000012185_01028_gene;locus_tag=GCA000012185_01028;gene=ftsN
contig_1	Pyrodigal	CDS	1011147	1011917	.	+	0	ID=GCA000012185_01028;Name=cell division protein FtsN;locus_tag=GCA000012185_01028;product=cell division protein FtsN;Dbxref=GO:0000910,GO:0005515;gene=ftsN;Parent=GCA000012185_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3087,COG:D,RefSeq:WP_038440311.1,SO:0001217,UniParc:UPI00003CD74B,UniRef:UniRef100_A0AB34IAU7,UniRef:UniRef50_A0A377IXV2,UniRef:UniRef90_A0A2S9RS37
contig_1	Pyrodigal	gene	1011930	1013462	.	-	.	ID=GCA000012185_01029_gene;locus_tag=GCA000012185_01029;gene=emrB
contig_1	Pyrodigal	CDS	1011930	1013462	.	-	0	ID=GCA000012185_01029;Name=Multidrug export protein EmrB;locus_tag=GCA000012185_01029;product=Multidrug export protein EmrB;Dbxref=GO:0005886,GO:0022857,GO:0046677,GO:0055085;gene=emrB;Parent=GCA000012185_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_011272272.1,SO:0001217,UniParc:UPI000053E16D,UniRef:UniRef100_A0A2S9S5F0,UniRef:UniRef50_P52600,UniRef:UniRef90_P44927
contig_1	Pyrodigal	gene	1013472	1014644	.	-	.	ID=GCA000012185_01030_gene;locus_tag=GCA000012185_01030;gene=emrA
contig_1	Pyrodigal	CDS	1013472	1014644	.	-	0	ID=GCA000012185_01030;Name=Multidrug export protein EmrA;locus_tag=GCA000012185_01030;product=Multidrug export protein EmrA;Dbxref=GO:0005886,GO:0042910,GO:0046677,GO:1990961;gene=emrA;Parent=GCA000012185_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,KEGG:K03543,RefSeq:WP_011272273.1,SO:0001217,UniParc:UPI000053E16E,UniRef:UniRef100_A0A2S9S5K4,UniRef:UniRef50_P44928,UniRef:UniRef90_P44928
contig_1	Pyrodigal	gene	1014817	1015299	.	-	.	ID=GCA000012185_01031_gene;locus_tag=GCA000012185_01031;gene=folA
contig_1	Pyrodigal	CDS	1014817	1015299	.	-	0	ID=GCA000012185_01031;Name=type 3 dihydrofolate reductase;locus_tag=GCA000012185_01031;product=type 3 dihydrofolate reductase;Dbxref=GO:0004146,GO:0005829,GO:0006730,GO:0046452,GO:0046654,GO:0046655,GO:0046677,GO:0050661;gene=folA;Parent=GCA000012185_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,RefSeq:WP_011272274.1,SO:0001217,UniParc:UPI000053E16F,UniRef:UniRef100_Q4QM09,UniRef:UniRef50_P43791,UniRef:UniRef90_P43791;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	1015401	1016507	.	+	.	ID=GCA000012185_01032_gene;locus_tag=GCA000012185_01032;gene=proB
contig_1	Pyrodigal	CDS	1015401	1016507	.	+	0	ID=GCA000012185_01032;Name=Glutamate 5-kinase;locus_tag=GCA000012185_01032;product=Glutamate 5-kinase;Dbxref=GO:0003723,GO:0004349,GO:0005524,GO:0005829,GO:0006561,GO:0055129;gene=proB;Parent=GCA000012185_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0263,COG:E,RefSeq:WP_011272275.1,SO:0001217,UniParc:UPI00003CD9C6,UniRef:UniRef100_Q4QM08,UniRef:UniRef50_Q9CJU5,UniRef:UniRef90_P43763;ec_number=2.7.2.11
contig_1	Pyrodigal	gene	1016588	1017178	.	+	.	ID=GCA000012185_01033_gene;locus_tag=GCA000012185_01033;gene=rppH
contig_1	Pyrodigal	CDS	1016588	1017178	.	+	0	ID=GCA000012185_01033;Name=RNA pyrophosphohydrolase;locus_tag=GCA000012185_01033;product=RNA pyrophosphohydrolase;Dbxref=GO:0005737,GO:0006402,GO:0016787,GO:0034353;gene=rppH;Parent=GCA000012185_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_011272276.1,SO:0001217,UniParc:UPI00003CD9C5,UniRef:UniRef100_Q4QM07,UniRef:UniRef50_A3N3J1,UniRef:UniRef90_Q4QM07;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1017178	1017972	.	+	.	ID=GCA000012185_01034_gene;locus_tag=GCA000012185_01034;gene=tauE
contig_1	Pyrodigal	CDS	1017178	1017972	.	+	0	ID=GCA000012185_01034;Name=putative membrane transporter protein HI_0902;locus_tag=GCA000012185_01034;product=putative membrane transporter protein HI_0902;Dbxref=GO:0005886;gene=tauE;Parent=GCA000012185_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_011272277.1,SO:0001217,UniParc:UPI000053E170,UniRef:UniRef100_A0AAX3IRP3,UniRef:UniRef50_P44070,UniRef:UniRef90_P44070
contig_1	Pyrodigal	gene	1017981	1018787	.	+	.	ID=GCA000012185_01035_gene;locus_tag=GCA000012185_01035;gene=lgt
contig_1	Pyrodigal	CDS	1017981	1018787	.	+	0	ID=GCA000012185_01035;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000012185_01035;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0009249,GO:0016020,GO:0042158;gene=lgt;Parent=GCA000012185_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_011272278.1,SO:0001217,UniParc:UPI000053E171,UniRef:UniRef100_Q4QM05,UniRef:UniRef50_P60955,UniRef:UniRef90_P44930;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	1018797	1019648	.	+	.	ID=GCA000012185_01036_gene;locus_tag=GCA000012185_01036;gene=thyA
contig_1	Pyrodigal	CDS	1018797	1019648	.	+	0	ID=GCA000012185_01036;Name=thymidylate synthase;locus_tag=GCA000012185_01036;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259;gene=thyA;Parent=GCA000012185_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_011272279.1,SO:0001217,UniParc:UPI000053E172,UniRef:UniRef100_Q4QM04,UniRef:UniRef50_Q5E7P1,UniRef:UniRef90_P44420;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	1019648	1020169	.	+	.	ID=GCA000012185_01037_gene;locus_tag=GCA000012185_01037;gene=tadA
contig_1	Pyrodigal	CDS	1019648	1020169	.	+	0	ID=GCA000012185_01037;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA000012185_01037;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270,GO:0052717;gene=tadA;Parent=GCA000012185_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_005663639.1,SO:0001217,UniParc:UPI000039A447,UniRef:UniRef100_A0A0C5F8Z3,UniRef:UniRef50_P44931,UniRef:UniRef90_P44931;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	1020197	1020511	.	-	.	ID=GCA000012185_01038_gene;locus_tag=GCA000012185_01038
contig_1	Pyrodigal	CDS	1020197	1020511	.	-	0	ID=GCA000012185_01038;Name=DUF721 domain-containing protein;locus_tag=GCA000012185_01038;product=DUF721 domain-containing protein;Parent=GCA000012185_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4701,COG:S,RefSeq:WP_011272280.1,SO:0001217,UniParc:UPI00003CD7E2,UniRef:UniRef100_A0AAJ8WAG5,UniRef:UniRef50_P44072,UniRef:UniRef90_F9GP67
contig_1	Pyrodigal	gene	1020591	1020893	.	+	.	ID=GCA000012185_01039_gene;locus_tag=GCA000012185_01039;gene=secM
contig_1	Pyrodigal	CDS	1020591	1020893	.	+	0	ID=GCA000012185_01039;Name=secA translation cis-regulator SecM;locus_tag=GCA000012185_01039;product=secA translation cis-regulator SecM;gene=secM;Parent=GCA000012185_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651471.1,SO:0001217,UniParc:UPI00003CD7E3,UniRef:UniRef100_Q4QM01,UniRef:UniRef50_P44073,UniRef:UniRef90_P44073
contig_1	Pyrodigal	gene	1021018	1023723	.	+	.	ID=GCA000012185_01040_gene;locus_tag=GCA000012185_01040;gene=secA
contig_1	Pyrodigal	CDS	1021018	1023723	.	+	0	ID=GCA000012185_01040;Name=preprotein translocase subunit SecA;locus_tag=GCA000012185_01040;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0006605,GO:0006886,GO:0008564,GO:0017038,GO:0031522,GO:0043952,GO:0046872,GO:0065002;gene=secA;Parent=GCA000012185_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,RefSeq:WP_011272282.1,SO:0001217,UniParc:UPI000053E174,UniRef:UniRef100_Q4QM00,UniRef:UniRef50_P10408,UniRef:UniRef90_P43803;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	1023788	1024198	.	+	.	ID=GCA000012185_01041_gene;locus_tag=GCA000012185_01041;gene=mutT
contig_1	Pyrodigal	CDS	1023788	1024198	.	+	0	ID=GCA000012185_01041;Name=8-oxo-dGTP diphosphatase MutT;locus_tag=GCA000012185_01041;product=8-oxo-dGTP diphosphatase MutT;Dbxref=GO:0006281,GO:0016818;gene=mutT;Parent=GCA000012185_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005648100.1,SO:0001217,UniParc:UPI000039AA7A,UniRef:UniRef100_A0A158SV93,UniRef:UniRef50_A0A1H7W623,UniRef:UniRef90_A0A158SV93;ec_number=3.6.1.55
contig_1	Pyrodigal	gene	1024307	1026163	.	+	.	ID=GCA000012185_01042_gene;locus_tag=GCA000012185_01042;gene=kefBC
contig_1	Pyrodigal	CDS	1024307	1026163	.	+	0	ID=GCA000012185_01042;Name=Glutathione-regulated potassium-efflux system protein;locus_tag=GCA000012185_01042;product=Glutathione-regulated potassium-efflux system protein;Dbxref=GO:0005886,GO:0006813,GO:0008324,GO:0015297,GO:1902600;gene=kefBC;Parent=GCA000012185_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1226,COG:P,RefSeq:WP_011272283.1,SO:0001217,UniParc:UPI00003CD7E6,UniRef:UniRef100_A5UI53,UniRef:UniRef50_P44933,UniRef:UniRef90_P44933
contig_1	Pyrodigal	gene	1026264	1027028	.	+	.	ID=GCA000012185_01043_gene;locus_tag=GCA000012185_01043;gene=cfa
contig_1	Pyrodigal	CDS	1026264	1027028	.	+	0	ID=GCA000012185_01043;Name=putative protein HI_0912;locus_tag=GCA000012185_01043;product=putative protein HI_0912;Dbxref=GO:0008168,GO:0008757;gene=cfa;Parent=GCA000012185_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2230,COG:I,RefSeq:WP_011272284.1,SO:0001217,UniParc:UPI00003CD7E7,UniRef:UniRef100_A0AAJ8WAH0,UniRef:UniRef50_P44074,UniRef:UniRef90_P44074
contig_1	Infernal	gene	1027100	1027185	.	+	.	ID=GCA000012185_01044_gene;locus_tag=GCA000012185_01044;gene=t44
contig_1	Infernal	ncRNA	1027100	1027185	2.1e-08	+	.	ID=GCA000012185_01044;Name=t44 RNA;locus_tag=GCA000012185_01044;product=t44 RNA;Dbxref=RFAM:RF00127;Parent=GCA000012185_01044_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00127
contig_1	Pyrodigal	gene	1027206	1027928	.	+	.	ID=GCA000012185_01045_gene;locus_tag=GCA000012185_01045;gene=rpsB
contig_1	Pyrodigal	CDS	1027206	1027928	.	+	0	ID=GCA000012185_01045;Name=30S ribosomal protein S2;locus_tag=GCA000012185_01045;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000012185_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_005645552.1,SO:0001217,UniParc:UPI000039A440,UniRef:UniRef100_P44371,UniRef:UniRef50_P44371,UniRef:UniRef90_P44371
contig_1	Pyrodigal	gene	1028062	1028913	.	+	.	ID=GCA000012185_01046_gene;locus_tag=GCA000012185_01046;gene=tsf
contig_1	Pyrodigal	CDS	1028062	1028913	.	+	0	ID=GCA000012185_01046;Name=translation elongation factor Ts;locus_tag=GCA000012185_01046;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0005737,GO:0006414;gene=tsf;Parent=GCA000012185_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_005648092.1,SO:0001217,UniParc:UPI000039AA7D,UniRef:UniRef100_Q4QLZ5,UniRef:UniRef50_P43894,UniRef:UniRef90_P43894
contig_1	Pyrodigal	gene	1029093	1030118	.	-	.	ID=GCA000012185_01047_gene;locus_tag=GCA000012185_01047;gene=lpxD
contig_1	Pyrodigal	CDS	1029093	1030118	.	-	0	ID=GCA000012185_01047;Name=UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase;locus_tag=GCA000012185_01047;product=UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase;Dbxref=GO:0009245,GO:0016020,GO:0016410;gene=lpxD;Parent=GCA000012185_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1044,COG:M,RefSeq:WP_011272285.1,SO:0001217,UniParc:UPI000039A43E,UniRef:UniRef100_Q4QLZ4,UniRef:UniRef50_P21645,UniRef:UniRef90_P43888,VFDB:VFC0258,VFDB:VFG013374;ec_number=2.3.1.191
contig_1	Pyrodigal	gene	1030131	1030724	.	-	.	ID=GCA000012185_01048_gene;locus_tag=GCA000012185_01048;gene=omp26
contig_1	Pyrodigal	CDS	1030131	1030724	.	-	0	ID=GCA000012185_01048;Name=Outer membrane protein 26;locus_tag=GCA000012185_01048;product=Outer membrane protein 26;Dbxref=GO:0009279,GO:0022417,GO:0050821,GO:0051082,GO:0061077;gene=omp26;Parent=GCA000012185_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2825,COG:MO,RefSeq:WP_005648089.1,SO:0001217,UniParc:UPI000039AA7F,UniRef:UniRef100_A0A0D0ILH5,UniRef:UniRef50_Q57483,UniRef:UniRef90_Q57483
contig_1	Pyrodigal	gene	1030832	1033234	.	-	.	ID=GCA000012185_01049_gene;locus_tag=GCA000012185_01049;gene=bamA
contig_1	Pyrodigal	CDS	1030832	1033234	.	-	0	ID=GCA000012185_01049;Name=outer membrane protein assembly factor BamA;locus_tag=GCA000012185_01049;product=outer membrane protein assembly factor BamA;Dbxref=GO:0009279,GO:0043165,GO:0051205,GO:0071709,GO:1990063;gene=bamA;Parent=GCA000012185_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4775,COG:M,KEGG:K07277,RefSeq:WP_011272286.1,SO:0001217,UniParc:UPI000053E175,UniRef:UniRef100_Q4QLZ2,UniRef:UniRef50_P44935,UniRef:UniRef90_P44935
contig_1	Pyrodigal	gene	1033254	1034585	.	-	.	ID=GCA000012185_01050_gene;locus_tag=GCA000012185_01050;gene=rseP
contig_1	Pyrodigal	CDS	1033254	1034585	.	-	0	ID=GCA000012185_01050;Name=RIP metalloprotease RseP;locus_tag=GCA000012185_01050;product=RIP metalloprotease RseP;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0016020,GO:0046872;gene=rseP;Parent=GCA000012185_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_011272287.1,SO:0001217,UniParc:UPI000053E176,UniRef:UniRef100_Q4QLZ1,UniRef:UniRef50_Q8ZRP1,UniRef:UniRef90_P44936;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1034595	1035461	.	-	.	ID=GCA000012185_01051_gene;locus_tag=GCA000012185_01051;gene=cdsA
contig_1	Pyrodigal	CDS	1034595	1035461	.	-	0	ID=GCA000012185_01051;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA000012185_01051;product=Phosphatidate cytidylyltransferase;Dbxref=GO:0004605,GO:0005886,GO:0016024;gene=cdsA;Parent=GCA000012185_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,RefSeq:WP_011272288.1,SO:0001217,UniParc:UPI00003CD853,UniRef:UniRef100_Q4QLZ0,UniRef:UniRef50_P44937,UniRef:UniRef90_P44937;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	1035479	1036198	.	-	.	ID=GCA000012185_01052_gene;locus_tag=GCA000012185_01052;gene=uppS
contig_1	Pyrodigal	CDS	1035479	1036198	.	-	0	ID=GCA000012185_01052;Name=polyprenyl diphosphate synthase;locus_tag=GCA000012185_01052;product=polyprenyl diphosphate synthase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0008360,GO:0008834,GO:0009252,GO:0016094,GO:0071555;gene=uppS;Parent=GCA000012185_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_011272289.1,SO:0001217,UniParc:UPI00003CD852,UniRef:UniRef100_Q4QLY9,UniRef:UniRef50_P44938,UniRef:UniRef90_P44938;ec_number=2.5.1.31
contig_1	Pyrodigal	gene	1036447	1039032	.	+	.	ID=GCA000012185_01053_gene;locus_tag=GCA000012185_01053;gene=leuS
contig_1	Pyrodigal	CDS	1036447	1039032	.	+	0	ID=GCA000012185_01053;Name=leucine--tRNA ligase;locus_tag=GCA000012185_01053;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000012185_01053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_011272290.1,SO:0001217,UniParc:UPI000053E177,UniRef:UniRef100_Q4QLY8,UniRef:UniRef50_P07813,UniRef:UniRef90_P43827;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	1039127	1039630	.	+	.	ID=GCA000012185_01054_gene;locus_tag=GCA000012185_01054;gene=lptE
contig_1	Pyrodigal	CDS	1039127	1039630	.	+	0	ID=GCA000012185_01054;Name=LPS-assembly lipoprotein LptE;locus_tag=GCA000012185_01054;product=LPS-assembly lipoprotein LptE;Dbxref=GO:0001530,GO:0009279,GO:0015920,GO:0043165,GO:1990351;gene=lptE;Parent=GCA000012185_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2980,COG:M,KEGG:K03643,RefSeq:WP_005651506.1,SO:0001217,UniParc:UPI00014F73CE,UniRef:UniRef100_Q4QLY7,UniRef:UniRef50_Q57457,UniRef:UniRef90_Q57457
contig_1	Pyrodigal	gene	1039630	1040664	.	+	.	ID=GCA000012185_01055_gene;locus_tag=GCA000012185_01055;gene=holA
contig_1	Pyrodigal	CDS	1039630	1040664	.	+	0	ID=GCA000012185_01055;Name=DNA polymerase III subunit delta;locus_tag=GCA000012185_01055;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0006261,GO:0009360;gene=holA;Parent=GCA000012185_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_011272292.1,SO:0001217,UniParc:UPI000053E179,UniRef:UniRef100_Q4QLY6,UniRef:UniRef50_P43747,UniRef:UniRef90_P43747;ec_number=2.7.7.7
contig_1	tRNAscan-SE	gene	1040736	1040812	.	-	.	ID=GCA000012185_01056_gene;locus_tag=GCA000012185_01056;gene=trnI
contig_1	tRNAscan-SE	tRNA	1040736	1040812	.	-	.	ID=GCA000012185_01056;Name=tRNA-Ile2(cat);locus_tag=GCA000012185_01056;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000012185_01056_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Pyrodigal	gene	1040898	1043066	.	-	.	ID=GCA000012185_01057_gene;locus_tag=GCA000012185_01057;gene=glyS
contig_1	Pyrodigal	CDS	1040898	1043066	.	-	0	ID=GCA000012185_01057;Name=Glycine--tRNA ligase beta subunit;locus_tag=GCA000012185_01057;product=Glycine--tRNA ligase beta subunit;Dbxref=GO:0004814,GO:0004820,GO:0005524,GO:0005829,GO:0006420,GO:0006426;gene=glyS;Parent=GCA000012185_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0751,COG:J,RefSeq:WP_011272293.1,SO:0001217,UniParc:UPI000053E17A,UniRef:UniRef100_Q4QLY5,UniRef:UniRef50_P00961,UniRef:UniRef90_P43822;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	1043112	1043528	.	-	.	ID=GCA000012185_01058_gene;locus_tag=GCA000012185_01058
contig_1	Pyrodigal	CDS	1043112	1043528	.	-	0	ID=GCA000012185_01058;Name=hypothetical protein;locus_tag=GCA000012185_01058;product=hypothetical protein;Parent=GCA000012185_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005655886.1,SO:0001217,UniParc:UPI00003CDAB4,UniRef:UniRef100_A0A0H3PFL7,UniRef:UniRef50_A0A0H3PFL7,UniRef:UniRef90_A0A0D0ILJ1
contig_1	Pyrodigal	gene	1043668	1044033	.	-	.	ID=GCA000012185_01059_gene;locus_tag=GCA000012185_01059;gene=ycjD
contig_1	Pyrodigal	CDS	1043668	1044033	.	-	0	ID=GCA000012185_01059;Name=putative protein HI_0925;locus_tag=GCA000012185_01059;product=putative protein HI_0925;gene=ycjD;Parent=GCA000012185_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2852,COG:L,RefSeq:WP_005693271.1,SO:0001217,UniParc:UPI0000139E1E,UniRef:UniRef100_P44075,UniRef:UniRef50_P44075,UniRef:UniRef90_P44075
contig_1	Pyrodigal	gene	1044063	1044323	.	-	.	ID=GCA000012185_01060_gene;locus_tag=GCA000012185_01060
contig_1	Pyrodigal	CDS	1044063	1044323	.	-	0	ID=GCA000012185_01060;Name=putative protein HI_0926;locus_tag=GCA000012185_01060;product=putative protein HI_0926;Parent=GCA000012185_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4545,COG:O,RefSeq:WP_005693272.1,SO:0001217,UniParc:UPI0000139E21,UniRef:UniRef100_P44076,UniRef:UniRef50_P44076,UniRef:UniRef90_P44076
contig_1	Pyrodigal	gene	1044382	1045290	.	-	.	ID=GCA000012185_01061_gene;locus_tag=GCA000012185_01061;gene=glyQ
contig_1	Pyrodigal	CDS	1044382	1045290	.	-	0	ID=GCA000012185_01061;Name=glycine--tRNA ligase subunit alpha;locus_tag=GCA000012185_01061;product=glycine--tRNA ligase subunit alpha;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005737,GO:0006426;gene=glyQ;Parent=GCA000012185_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0752,COG:J,KEGG:K01878,RefSeq:WP_005632923.1,SO:0001217,UniParc:UPI000039AA8A,UniRef:UniRef100_Q4QLY1,UniRef:UniRef50_P00960,UniRef:UniRef90_P43821;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	1045553	1047079	.	+	.	ID=GCA000012185_01062_gene;locus_tag=GCA000012185_01062;gene=katA
contig_1	Pyrodigal	CDS	1045553	1047079	.	+	0	ID=GCA000012185_01062;Name=Catalase;locus_tag=GCA000012185_01062;product=Catalase;Dbxref=GO:0004096,GO:0005737,GO:0020037,GO:0042542,GO:0042744,GO:0046872;gene=katA;Parent=GCA000012185_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0753,COG:P,KEGG:K03781,RefSeq:WP_011272294.1,SO:0001217,UniParc:UPI00003CD8F9,UniRef:UniRef100_Q4QLY0,UniRef:UniRef50_O52762,UniRef:UniRef90_P44390;ec_number=1.11.1.6
contig_1	Pyrodigal	gene	1047311	1048492	.	-	.	ID=GCA000012185_01063_gene;locus_tag=GCA000012185_01063;gene=gsp
contig_1	Pyrodigal	CDS	1047311	1048492	.	-	0	ID=GCA000012185_01063;Name=Putative acid--amine ligase HI_0929;locus_tag=GCA000012185_01063;product=Putative acid--amine ligase HI_0929;Dbxref=GO:0005524,GO:0016874,GO:0046872;gene=gsp;Parent=GCA000012185_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0754,COG:E,RefSeq:WP_011272295.1,SO:0001217,UniParc:UPI00003CD8F8,UniRef:UniRef100_A0A2R3G316,UniRef:UniRef50_P44940,UniRef:UniRef90_P44940;ec_number=6.3.1.-
contig_1	Pyrodigal	gene	1048493	1049074	.	-	.	ID=GCA000012185_01064_gene;locus_tag=GCA000012185_01064
contig_1	Pyrodigal	CDS	1048493	1049074	.	-	0	ID=GCA000012185_01064;Name=putative protein HI_0930;locus_tag=GCA000012185_01064;product=putative protein HI_0930;Parent=GCA000012185_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005655898.1,SO:0001217,UniParc:UPI000005E88C,UniRef:UniRef100_A0A0H3PPE0,UniRef:UniRef50_P44077,UniRef:UniRef90_P44077
contig_1	Pyrodigal	gene	1049087	1049506	.	-	.	ID=GCA000012185_01065_gene;locus_tag=GCA000012185_01065
contig_1	Pyrodigal	CDS	1049087	1049506	.	-	0	ID=GCA000012185_01065;Name=putative protein HI_0931;locus_tag=GCA000012185_01065;product=putative protein HI_0931;Parent=GCA000012185_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005636440.1,SO:0001217,UniParc:UPI000039A42B,UniRef:UniRef100_Q4QLX7,UniRef:UniRef50_P44078,UniRef:UniRef90_P44078
contig_1	Pyrodigal	gene	1049590	1050900	.	-	.	ID=GCA000012185_01066_gene;locus_tag=GCA000012185_01066;gene=eno
contig_1	Pyrodigal	CDS	1049590	1050900	.	-	0	ID=GCA000012185_01066;Name=phosphopyruvate hydratase;locus_tag=GCA000012185_01066;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000012185_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_005655903.1,SO:0001217,UniParc:UPI000053E17C,UniRef:UniRef100_Q4QLX6,UniRef:UniRef50_Q8GE63,UniRef:UniRef90_P43806;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	1051021	1052226	.	-	.	ID=GCA000012185_01067_gene;locus_tag=GCA000012185_01067;gene=yhiN
contig_1	Pyrodigal	CDS	1051021	1052226	.	-	0	ID=GCA000012185_01067;Name=putative protein HI_0933;locus_tag=GCA000012185_01067;product=putative protein HI_0933;gene=yhiN;Parent=GCA000012185_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,RefSeq:WP_005655906.1,SO:0001217,UniParc:UPI000053E17D,UniRef:UniRef100_A0A0H3PJM8,UniRef:UniRef50_P44941,UniRef:UniRef90_P44941
contig_1	Pyrodigal	gene	1052223	1053365	.	-	.	ID=GCA000012185_01068_gene;locus_tag=GCA000012185_01068;gene=nrfF
contig_1	Pyrodigal	CDS	1052223	1053365	.	-	0	ID=GCA000012185_01068;Name=heme lyase NrfEFG subunit NrfF;locus_tag=GCA000012185_01068;product=heme lyase NrfEFG subunit NrfF;Dbxref=GO:0005886,GO:0042597,GO:0046872;gene=nrfF;Parent=GCA000012185_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4235,RefSeq:WP_005688390.1,SO:0001217,UniParc:UPI000053E17E,UniRef:UniRef100_A0A2S9S5J0,UniRef:UniRef50_P44942,UniRef:UniRef90_P44942
contig_1	Pyrodigal	gene	1053362	1053892	.	-	.	ID=GCA000012185_01069_gene;locus_tag=GCA000012185_01069;gene=nrfX
contig_1	Pyrodigal	CDS	1053362	1053892	.	-	0	ID=GCA000012185_01069;Name=putative thiol:disulfide interchange protein DsbE-2;locus_tag=GCA000012185_01069;product=putative thiol:disulfide interchange protein DsbE-2;Dbxref=GO:0005886,GO:0015036,GO:0017004,GO:0030288;gene=nrfX;Parent=GCA000012185_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005688388.1,SO:0001217,UniParc:UPI00003CDACE,UniRef:UniRef100_A0A2S9S5I9,UniRef:UniRef50_P44943,UniRef:UniRef90_P44943
contig_1	Pyrodigal	gene	1053892	1055799	.	-	.	ID=GCA000012185_01070_gene;locus_tag=GCA000012185_01070;gene=nrfE
contig_1	Pyrodigal	CDS	1053892	1055799	.	-	0	ID=GCA000012185_01070;Name=Cytochrome c-type biogenesis protein NrfE;locus_tag=GCA000012185_01070;product=Cytochrome c-type biogenesis protein NrfE;Dbxref=GO:0005886,GO:0015232,GO:0017004,GO:0020037;gene=nrfE;Parent=GCA000012185_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG1138,KEGG:K04016,RefSeq:WP_011272297.1,SO:0001217,UniParc:UPI000053E17F,UniRef:UniRef100_A0A2S9S5J2,UniRef:UniRef50_P44944,UniRef:UniRef90_P44944
contig_1	Pyrodigal	gene	1055908	1056720	.	-	.	ID=GCA000012185_01071_gene;locus_tag=GCA000012185_01071;gene=suhB
contig_1	Pyrodigal	CDS	1055908	1056720	.	-	0	ID=GCA000012185_01071;Name=inositol-1-monophosphatase;locus_tag=GCA000012185_01071;product=inositol-1-monophosphatase;Dbxref=GO:0003723,GO:0005737,GO:0006020,GO:0007165,GO:0008934,GO:0031564,GO:0042254,GO:0046854,GO:0046872;gene=suhB;Parent=GCA000012185_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_011272298.1,SO:0001217,UniParc:UPI000053E180,UniRef:UniRef100_A0A2S9S5J3,UniRef:UniRef50_P0ADG4,UniRef:UniRef90_P44333;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	1056920	1057432	.	+	.	ID=GCA000012185_01072_gene;locus_tag=GCA000012185_01072;gene=gspO
contig_1	Pyrodigal	CDS	1056920	1057432	.	+	0	ID=GCA000012185_01072;Name=putative protein HI_0938;locus_tag=GCA000012185_01072;product=putative protein HI_0938;Dbxref=GO:0016020;gene=gspO;Parent=GCA000012185_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,KEGG:K02679,RefSeq:WP_011272299.1,SO:0001217,UniParc:UPI00003CD7E9,UniRef:UniRef100_A0A2S9S5P8,UniRef:UniRef50_P44079,UniRef:UniRef90_P44079
contig_1	Pyrodigal	gene	1057432	1058151	.	+	.	ID=GCA000012185_01073_gene;locus_tag=GCA000012185_01073;gene=pulJ
contig_1	Pyrodigal	CDS	1057432	1058151	.	+	0	ID=GCA000012185_01073;Name=putative protein HI_0939;locus_tag=GCA000012185_01073;product=putative protein HI_0939;Dbxref=GO:0016020;gene=pulJ;Parent=GCA000012185_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4795,COG:U,RefSeq:WP_011272300.1,SO:0001217,UniParc:UPI00003CD7EA,UniRef:UniRef100_A0A2S9S5J4,UniRef:UniRef50_P44080,UniRef:UniRef90_P44080
contig_1	Pyrodigal	gene	1058148	1058831	.	+	.	ID=GCA000012185_01074_gene;locus_tag=GCA000012185_01074
contig_1	Pyrodigal	CDS	1058148	1058831	.	+	0	ID=GCA000012185_01074;Name=putative protein HI_0940;locus_tag=GCA000012185_01074;product=putative protein HI_0940;Dbxref=GO:0016020;Parent=GCA000012185_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272301.1,SO:0001217,UniParc:UPI00003CD7EB,UniRef:UniRef100_A0A2S9S5K6,UniRef:UniRef50_P44081,UniRef:UniRef90_P44081
contig_1	Pyrodigal	gene	1058815	1059111	.	+	.	ID=GCA000012185_01075_gene;locus_tag=GCA000012185_01075
contig_1	Pyrodigal	CDS	1058815	1059111	.	+	0	ID=GCA000012185_01075;Name=putative protein HI_0941;locus_tag=GCA000012185_01075;product=putative protein HI_0941;Parent=GCA000012185_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005BEABE4,UniRef:UniRef100_A0A346K7R3,UniRef:UniRef50_P44082,UniRef:UniRef90_P44082
contig_1	Pyrodigal	gene	1059157	1062522	.	+	.	ID=GCA000012185_01076_gene;locus_tag=GCA000012185_01076;gene=recC
contig_1	Pyrodigal	CDS	1059157	1062522	.	+	0	ID=GCA000012185_01076;Name=exodeoxyribonuclease V subunit gamma;locus_tag=GCA000012185_01076;product=exodeoxyribonuclease V subunit gamma;Dbxref=GO:0000724,GO:0003677,GO:0003678,GO:0005524,GO:0006281,GO:0006310,GO:0008854,GO:0009338;gene=recC;Parent=GCA000012185_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1330,COG:L,KEGG:K03583,RefSeq:WP_011272303.1,SO:0001217,UniParc:UPI000053E182,UniRef:UniRef100_Q4QLW6,UniRef:UniRef50_P44945,UniRef:UniRef90_P44945;ec_number=3.1.11.5
contig_1	Pyrodigal	gene	1062577	1063026	.	+	.	ID=GCA000012185_01077_gene;locus_tag=GCA000012185_01077;gene=nrdR
contig_1	Pyrodigal	CDS	1062577	1063026	.	+	0	ID=GCA000012185_01077;Name=transcriptional regulator NrdR;locus_tag=GCA000012185_01077;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000012185_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_005648026.1,SO:0001217,UniParc:UPI000013A2AD,UniRef:UniRef100_P44946,UniRef:UniRef50_P44946,UniRef:UniRef90_P44946
contig_1	Pyrodigal	gene	1063029	1064147	.	+	.	ID=GCA000012185_01078_gene;locus_tag=GCA000012185_01078;gene=ribD
contig_1	Pyrodigal	CDS	1063029	1064147	.	+	0	ID=GCA000012185_01078;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000012185_01078;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008270,GO:0008703,GO:0008835,GO:0009231,GO:0050661;gene=ribD;Parent=GCA000012185_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,RefSeq:WP_011272304.1,SO:0001217,UniParc:UPI00003CD7EF,UniRef:UniRef100_A0A2R3FX05,UniRef:UniRef50_P44326,UniRef:UniRef90_P44326;ec_number=3.5.4.26
contig_1	Pyrodigal	gene	1064148	1065170	.	+	.	ID=GCA000012185_01079_gene;locus_tag=GCA000012185_01079;gene=degS
contig_1	Pyrodigal	CDS	1064148	1065170	.	+	0	ID=GCA000012185_01079;Name=outer membrane-stress sensor serine endopeptidase DegS;locus_tag=GCA000012185_01079;product=outer membrane-stress sensor serine endopeptidase DegS;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0008236,GO:0030288,GO:0045152,GO:0071218;gene=degS;Parent=GCA000012185_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_005693292.1,SO:0001217,UniParc:UPI000053E183,UniRef:UniRef100_A0A2R3FX14,UniRef:UniRef50_P44947,UniRef:UniRef90_P44947;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	1065244	1066059	.	-	.	ID=GCA000012185_01080_gene;locus_tag=GCA000012185_01080;gene=mutM
contig_1	Pyrodigal	CDS	1065244	1066059	.	-	0	ID=GCA000012185_01080;Name=DNA-formamidopyrimidine glycosylase;locus_tag=GCA000012185_01080;product=DNA-formamidopyrimidine glycosylase;Dbxref=GO:0003684,GO:0003906,GO:0005737,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0034039,GO:0046872,GO:0140078;gene=mutM;Parent=GCA000012185_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,RefSeq:WP_011272305.1,SO:0001217,UniParc:UPI000053E184,UniRef:UniRef100_Q4QLW2,UniRef:UniRef50_Q65R59,UniRef:UniRef90_P44948;ec_number=3.2.2.23
contig_1	Pyrodigal	gene	1066291	1067826	.	-	.	ID=GCA000012185_01081_gene;locus_tag=GCA000012185_01081;gene=ddc
contig_1	Pyrodigal	CDS	1066291	1067826	.	-	0	ID=GCA000012185_01081;Name=L-2%2C4-diaminobutyrate decarboxylase;locus_tag=GCA000012185_01081;product=L-2%2C4-diaminobutyrate decarboxylase;Dbxref=GO:0005737,GO:0016831,GO:0019752,GO:0030170,GO:0033983;gene=ddc;Parent=GCA000012185_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693296,COG:COG0076,COG:E,RefSeq:WP_011272306.1,SO:0001217,UniParc:UPI000053E185,UniRef:UniRef100_A0A2R3G7L2,UniRef:UniRef50_P71362,UniRef:UniRef90_P71362;ec_number=4.1.1.86
contig_1	Pyrodigal	gene	1067846	1068244	.	-	.	ID=GCA000012185_01082_gene;locus_tag=GCA000012185_01082;gene=vapC2
contig_1	Pyrodigal	CDS	1067846	1068244	.	-	0	ID=GCA000012185_01082;Name=Ribonuclease VapC2;locus_tag=GCA000012185_01082;product=Ribonuclease VapC2;Dbxref=GO:0000287,GO:0004540;gene=vapC2;Parent=GCA000012185_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1487,COG:V,RefSeq:WP_005651560.1,SO:0001217,UniParc:UPI0000139E5A,UniRef:UniRef100_P71363,UniRef:UniRef50_P71363,UniRef:UniRef90_P71363;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1068244	1068477	.	-	.	ID=GCA000012185_01083_gene;locus_tag=GCA000012185_01083;gene=vapB2
contig_1	Pyrodigal	CDS	1068244	1068477	.	-	0	ID=GCA000012185_01083;Name=type II toxin-antitoxin system antitoxin VapB2;locus_tag=GCA000012185_01083;product=type II toxin-antitoxin system antitoxin VapB2;Dbxref=GO:0003677;gene=vapB2;Parent=GCA000012185_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005648011,COG:COG4456,COG:S,KEGG:K18829,RefSeq:WP_005648011.1,SO:0001217,UniParc:UPI0000139E5C,UniRef:UniRef100_Q57120,UniRef:UniRef50_Q57120,UniRef:UniRef90_Q57120
contig_1	Pyrodigal	gene	1068624	1069988	.	-	.	ID=GCA000012185_01084_gene;locus_tag=GCA000012185_01084;gene=dat
contig_1	Pyrodigal	CDS	1068624	1069988	.	-	0	ID=GCA000012185_01084;Name=diaminobutyrate--2-oxoglutarate transaminase;locus_tag=GCA000012185_01084;product=diaminobutyrate--2-oxoglutarate transaminase;Dbxref=GO:0008483,GO:0009058,GO:0030170,GO:0045303;gene=dat;Parent=GCA000012185_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0160,COG:E,RefSeq:WP_005651563.1,SO:0001217,UniParc:UPI00003CD86A,UniRef:UniRef100_A0A2R3FY54,UniRef:UniRef50_P56744,UniRef:UniRef90_P44951;ec_number=2.6.1.76
contig_1	Pyrodigal	gene	1070335	1070505	.	-	.	ID=GCA000012185_01085_gene;locus_tag=GCA000012185_01085;gene=rpmG
contig_1	Pyrodigal	CDS	1070335	1070505	.	-	0	ID=GCA000012185_01085;Name=50S ribosomal protein L33;locus_tag=GCA000012185_01085;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmG;Parent=GCA000012185_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_005613503.1,SO:0001217,UniParc:UPI0000133F8A,UniRef:UniRef100_P44369,UniRef:UniRef50_Q0K7B1,UniRef:UniRef90_P44369
contig_1	Pyrodigal	gene	1070517	1070753	.	-	.	ID=GCA000012185_01086_gene;locus_tag=GCA000012185_01086;gene=rpmB
contig_1	Pyrodigal	CDS	1070517	1070753	.	-	0	ID=GCA000012185_01086;Name=50S ribosomal protein L28;locus_tag=GCA000012185_01086;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmB;Parent=GCA000012185_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_005542826.1,SO:0001217,UniParc:UPI00001685D9,UniRef:UniRef100_P44364,UniRef:UniRef50_P44364,UniRef:UniRef90_P44364
contig_1	Pyrodigal	gene	1070967	1071632	.	-	.	ID=GCA000012185_01087_gene;locus_tag=GCA000012185_01087;gene=radC
contig_1	Pyrodigal	CDS	1070967	1071632	.	-	0	ID=GCA000012185_01087;Name=DNA repair protein RadC;locus_tag=GCA000012185_01087;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281,GO:0006508,GO:0008237,GO:0046872;gene=radC;Parent=GCA000012185_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2003,COG:L,KEGG:K03630,RefSeq:WP_013526173.1,SO:0001217,UniParc:UPI00003CD869,UniRef:UniRef100_Q4QLV5,UniRef:UniRef50_P44952,UniRef:UniRef90_P44952
contig_1	Pyrodigal	gene	1071795	1072997	.	+	.	ID=GCA000012185_01088_gene;locus_tag=GCA000012185_01088;gene=coaBC
contig_1	Pyrodigal	CDS	1071795	1072997	.	+	0	ID=GCA000012185_01088;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000012185_01088;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941,GO:0046872,GO:0071513;gene=coaBC;Parent=GCA000012185_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_011272308.1,SO:0001217,UniParc:UPI00003CD868,UniRef:UniRef100_A0A0Y7J7V5,UniRef:UniRef50_P44953,UniRef:UniRef90_P44953;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	1073045	1073500	.	+	.	ID=GCA000012185_01089_gene;locus_tag=GCA000012185_01089;gene=dut
contig_1	Pyrodigal	CDS	1073045	1073500	.	+	0	ID=GCA000012185_01089;Name=dUTP diphosphatase;locus_tag=GCA000012185_01089;product=dUTP diphosphatase;Dbxref=GO:0000287,GO:0004170,GO:0006226,GO:0046081;gene=dut;Parent=GCA000012185_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0756,COG:FV,RefSeq:WP_005631431.1,SO:0001217,UniParc:UPI000012997C,UniRef:UniRef100_P43792,UniRef:UniRef50_Q5ZSN0,UniRef:UniRef90_P43792;ec_number=3.6.1.23
contig_1	Pyrodigal	gene	1073504	1074160	.	+	.	ID=GCA000012185_01090_gene;locus_tag=GCA000012185_01090;gene=slmA
contig_1	Pyrodigal	CDS	1073504	1074160	.	+	0	ID=GCA000012185_01090;Name=nucleoid occlusion factor SlmA;locus_tag=GCA000012185_01090;product=nucleoid occlusion factor SlmA;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0010974,GO:0043590,GO:0051301;gene=slmA;Parent=GCA000012185_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,KEGG:K05501,RefSeq:WP_005648000.1,SO:0001217,UniParc:UPI00001377A4,UniRef:UniRef100_P29280,UniRef:UniRef50_Q65R67,UniRef:UniRef90_P29280
contig_1	Pyrodigal	gene	1074182	1074433	.	+	.	ID=GCA000012185_01091_gene;locus_tag=GCA000012185_01091;gene=yheU
contig_1	Pyrodigal	CDS	1074182	1074433	.	+	0	ID=GCA000012185_01091;Name=YheU family protein;locus_tag=GCA000012185_01091;product=YheU family protein;gene=yheU;Parent=GCA000012185_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3089,COG:S,RefSeq:WP_005647999.1,SO:0001217,UniParc:UPI00001B5C65,UniRef:UniRef100_P44954,UniRef:UniRef50_P44954,UniRef:UniRef90_P44954
contig_1	Pyrodigal	gene	1074418	1075092	.	+	.	ID=GCA000012185_01092_gene;locus_tag=GCA000012185_01092;gene=crp
contig_1	Pyrodigal	CDS	1074418	1075092	.	+	0	ID=GCA000012185_01092;Name=cAMP-activated global transcriptional regulator CRP;locus_tag=GCA000012185_01092;product=cAMP-activated global transcriptional regulator CRP;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0030420,GO:0030552;gene=crp;Parent=GCA000012185_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,RefSeq:WP_005647998.1,SO:0001217,UniParc:UPI0000128477,UniRef:UniRef100_P29281,UniRef:UniRef50_P29281,UniRef:UniRef90_P29281
contig_1	Pyrodigal	gene	1075457	1076635	.	-	.	ID=GCA000012185_01093_gene;locus_tag=GCA000012185_01093;gene=rlmC
contig_1	Pyrodigal	CDS	1075457	1076635	.	-	0	ID=GCA000012185_01093;Name=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;locus_tag=GCA000012185_01093;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;Dbxref=GO:0005506,GO:0008649,GO:0016070,GO:0051539,GO:0070041,GO:0070475;gene=rlmC;Parent=GCA000012185_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03212,RefSeq:WP_011272309.1,SO:0001217,UniParc:UPI00003CD967,UniRef:UniRef100_Q4QLU9,UniRef:UniRef50_Q9CPH1,UniRef:UniRef90_Q4QLU9;ec_number=2.1.1.189
contig_1	Pyrodigal	gene	1076628	1077683	.	-	.	ID=GCA000012185_01094_gene;locus_tag=GCA000012185_01094;gene=nagZ
contig_1	Pyrodigal	CDS	1076628	1077683	.	-	0	ID=GCA000012185_01094;Name=beta-N-acetylhexosaminidase;locus_tag=GCA000012185_01094;product=beta-N-acetylhexosaminidase;Dbxref=GO:0004553,GO:0005737,GO:0005975,GO:0008360,GO:0009252,GO:0009254,GO:0016231,GO:0051301,GO:0071555;gene=nagZ;Parent=GCA000012185_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1472,COG:G,RefSeq:WP_011272310.1,SO:0001217,UniParc:UPI00003CD968,UniRef:UniRef100_Q4QLU8,UniRef:UniRef50_B2VDM3,UniRef:UniRef90_P44955;ec_number=3.2.1.52
contig_1	Pyrodigal	gene	1077687	1078037	.	-	.	ID=GCA000012185_01095_gene;locus_tag=GCA000012185_01095;gene=ycfL
contig_1	Pyrodigal	CDS	1077687	1078037	.	-	0	ID=GCA000012185_01095;Name=putative protein HI_0960;locus_tag=GCA000012185_01095;product=putative protein HI_0960;gene=ycfL;Parent=GCA000012185_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5633,COG:S,RefSeq:WP_005686225.1,SO:0001217,UniParc:UPI000053E187,UniRef:UniRef100_Q4QLU7,UniRef:UniRef50_P44084,UniRef:UniRef90_P44084
contig_1	Pyrodigal	gene	1078037	1078387	.	-	.	ID=GCA000012185_01096_gene;locus_tag=GCA000012185_01096;gene=hinT
contig_1	Pyrodigal	CDS	1078037	1078387	.	-	0	ID=GCA000012185_01096;Name=purine nucleoside phosphoramidase;locus_tag=GCA000012185_01096;product=purine nucleoside phosphoramidase;Dbxref=GO:0000166,GO:0005737,GO:0005829,GO:0043530,GO:0055130;gene=hinT;Parent=GCA000012185_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_041174747.1,SO:0001217,UniParc:UPI0002ED946C,UniRef:UniRef100_Q4QLU6,UniRef:UniRef50_P0ACE7,UniRef:UniRef90_P44956;ec_number=3.9.1.-
contig_1	Pyrodigal	gene	1078504	1081329	.	-	.	ID=GCA000012185_01097_gene;locus_tag=GCA000012185_01097;gene=ileS
contig_1	Pyrodigal	CDS	1078504	1081329	.	-	0	ID=GCA000012185_01097;Name=isoleucine--tRNA ligase;locus_tag=GCA000012185_01097;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000012185_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_011272312.1,SO:0001217,UniParc:UPI000053E189,UniRef:UniRef100_Q4QLU5,UniRef:UniRef50_P00956,UniRef:UniRef90_P43824;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	1081358	1082284	.	-	.	ID=GCA000012185_01098_gene;locus_tag=GCA000012185_01098;gene=ribF
contig_1	Pyrodigal	CDS	1081358	1082284	.	-	0	ID=GCA000012185_01098;Name=bifunctional riboflavin kinase/FAD synthetase;locus_tag=GCA000012185_01098;product=bifunctional riboflavin kinase/FAD synthetase;Dbxref=GO:0003919,GO:0005524,GO:0006747,GO:0006771,GO:0008531,GO:0009231,GO:0009398;gene=ribF;Parent=GCA000012185_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_041174748.1,SO:0001217,UniParc:UPI0002FBC331,UniRef:UniRef100_Q4QLU4,UniRef:UniRef50_P44957,UniRef:UniRef90_P44957;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	1082331	1083863	.	-	.	ID=GCA000012185_01099_gene;locus_tag=GCA000012185_01099;gene=murJ
contig_1	Pyrodigal	CDS	1082331	1083863	.	-	0	ID=GCA000012185_01099;Name=murein biosynthesis integral membrane protein MurJ;locus_tag=GCA000012185_01099;product=murein biosynthesis integral membrane protein MurJ;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0015648,GO:0015836,GO:0034204,GO:0071555;gene=murJ;Parent=GCA000012185_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0728,COG:M,KEGG:K03980,SO:0001217,UniParc:UPI00003CD8AB,UniRef:UniRef100_Q4QLU3,UniRef:UniRef50_P44958,UniRef:UniRef90_P44958
contig_1	Pyrodigal	gene	1084172	1084435	.	+	.	ID=GCA000012185_01100_gene;locus_tag=GCA000012185_01100;gene=rpsT
contig_1	Pyrodigal	CDS	1084172	1084435	.	+	0	ID=GCA000012185_01100;Name=30S ribosomal protein S20;locus_tag=GCA000012185_01100;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000012185_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_011272315.1,SO:0001217,UniParc:UPI00016100C3,UniRef:UniRef100_A0AAJ8WAD0,UniRef:UniRef50_P0A7U7,UniRef:UniRef90_P44959
contig_1	Pyrodigal	gene	1084507	1085073	.	-	.	ID=GCA000012185_01101_gene;locus_tag=GCA000012185_01101
contig_1	Pyrodigal	CDS	1084507	1085073	.	-	0	ID=GCA000012185_01101;Name=DUF5358 domain-containing protein;locus_tag=GCA000012185_01101;product=DUF5358 domain-containing protein;Parent=GCA000012185_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272316.1,SO:0001217,UniParc:UPI000053E18A,UniRef:UniRef100_A0A2S9S474,UniRef:UniRef90_P44085
contig_1	Pyrodigal	gene	1085219	1086076	.	+	.	ID=GCA000012185_01102_gene;locus_tag=GCA000012185_01102;gene=menB
contig_1	Pyrodigal	CDS	1085219	1086076	.	+	0	ID=GCA000012185_01102;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000012185_01102;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234;gene=menB;Parent=GCA000012185_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,RefSeq:WP_011272317.1,SO:0001217,UniParc:UPI000053E18B,UniRef:UniRef100_A0A2S9S498,UniRef:UniRef50_P23966,UniRef:UniRef90_P44960;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	1086246	1087235	.	+	.	ID=GCA000012185_01103_gene;locus_tag=GCA000012185_01103;gene=menC
contig_1	Pyrodigal	CDS	1086246	1087235	.	+	0	ID=GCA000012185_01103;Name=o-succinylbenzoate synthase;locus_tag=GCA000012185_01103;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016836,GO:0043748;gene=menC;Parent=GCA000012185_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1441,COG:H,KEGG:K02549,RefSeq:WP_011272318.1,SO:0001217,UniParc:UPI000053E18C,UniRef:UniRef100_A0AAJ8WAC9,UniRef:UniRef50_P29208,UniRef:UniRef90_P44961;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	1087292	1087741	.	+	.	ID=GCA000012185_01104_gene;locus_tag=GCA000012185_01104;gene=aroQ
contig_1	Pyrodigal	CDS	1087292	1087741	.	+	0	ID=GCA000012185_01104;Name=type II 3-dehydroquinate dehydratase;locus_tag=GCA000012185_01104;product=type II 3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0008652,GO:0009073,GO:0009423,GO:0019631;gene=aroQ;Parent=GCA000012185_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0757,COG:E,RefSeq:WP_011272319.1,SO:0001217,UniParc:UPI000053E18D,UniRef:UniRef100_Q4QLT8,UniRef:UniRef50_P43878,UniRef:UniRef90_P43878;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	1087895	1088362	.	+	.	ID=GCA000012185_01105_gene;locus_tag=GCA000012185_01105;gene=accB
contig_1	Pyrodigal	CDS	1087895	1088362	.	+	0	ID=GCA000012185_01105;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA000012185_01105;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA000012185_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_011272320.1,SO:0001217,UniParc:UPI000053E18E,UniRef:UniRef100_A0A0K9M5V4,UniRef:UniRef50_P0ABD8,UniRef:UniRef90_P43874;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1088539	1089885	.	+	.	ID=GCA000012185_01106_gene;locus_tag=GCA000012185_01106;gene=accC
contig_1	Pyrodigal	CDS	1088539	1089885	.	+	0	ID=GCA000012185_01106;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000012185_01106;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0003989,GO:0004075,GO:0005524,GO:0006633,GO:0009317,GO:0016874,GO:0046872,GO:2001295;gene=accC;Parent=GCA000012185_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_011272321.1,SO:0001217,UniParc:UPI000053E18F,UniRef:UniRef100_A0AAJ8WQR0,UniRef:UniRef50_P24182,UniRef:UniRef90_P43873;ec_number=6.3.4.14
contig_1	Pyrodigal	gene	1090090	1090347	.	+	.	ID=GCA000012185_01107_gene;locus_tag=GCA000012185_01107;gene=yhdT
contig_1	Pyrodigal	CDS	1090090	1090347	.	+	0	ID=GCA000012185_01107;Name=putative protein HI_0974-1;locus_tag=GCA000012185_01107;product=putative protein HI_0974-1;Dbxref=GO:0005886;gene=yhdT;Parent=GCA000012185_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3924,COG:S,RefSeq:WP_011272322.1,SO:0001217,UniParc:UPI00003CDA03,UniRef:UniRef100_A0AAJ8WQF0,UniRef:UniRef50_P46455,UniRef:UniRef90_P46455
contig_1	Pyrodigal	gene	1090344	1091798	.	+	.	ID=GCA000012185_01108_gene;locus_tag=GCA000012185_01108;gene=panF
contig_1	Pyrodigal	CDS	1090344	1091798	.	+	0	ID=GCA000012185_01108;Name=sodium/pantothenate symporter;locus_tag=GCA000012185_01108;product=sodium/pantothenate symporter;Dbxref=GO:0015081,GO:0015233,GO:0015887,GO:0016020,GO:0036376;gene=panF;Parent=GCA000012185_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14392,RefSeq:WP_011272323.1,SO:0001217,UniParc:UPI000053E190,UniRef:UniRef100_A0AAJ8WQL8,UniRef:UniRef50_P16256,UniRef:UniRef90_A0A0M3G6N9
contig_1	Pyrodigal	gene	1091919	1092791	.	+	.	ID=GCA000012185_01109_gene;locus_tag=GCA000012185_01109;gene=rhaT
contig_1	Pyrodigal	CDS	1091919	1092791	.	+	0	ID=GCA000012185_01109;Name=putative transporter HI_0976-1;locus_tag=GCA000012185_01109;product=putative transporter HI_0976-1;Dbxref=GO:0005886;gene=rhaT;Parent=GCA000012185_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_011272324.1,SO:0001217,UniParc:UPI000053E191,UniRef:UniRef100_A0AAJ8WAD1,UniRef:UniRef50_O86230,UniRef:UniRef90_O86230
contig_1	Pyrodigal	gene	1092826	1093713	.	+	.	ID=GCA000012185_01110_gene;locus_tag=GCA000012185_01110;gene=prmA
contig_1	Pyrodigal	CDS	1092826	1093713	.	+	0	ID=GCA000012185_01110;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA000012185_01110;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0005829,GO:0008757,GO:0016279,GO:0032259,GO:0036211,GO:0042054;gene=prmA;Parent=GCA000012185_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272325.1,SO:0001217,UniParc:UPI000053E192,UniRef:UniRef100_Q4QLT2,UniRef:UniRef50_P0A8T1,UniRef:UniRef90_P44402;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1093860	1094840	.	+	.	ID=GCA000012185_01111_gene;locus_tag=GCA000012185_01111;gene=dusB
contig_1	Pyrodigal	CDS	1093860	1094840	.	+	0	ID=GCA000012185_01111;Name=tRNA dihydrouridine synthase DusB;locus_tag=GCA000012185_01111;product=tRNA dihydrouridine synthase DusB;Dbxref=GO:0000049,GO:0008033,GO:0010181,GO:0017150,GO:0050660;gene=dusB;Parent=GCA000012185_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,KEGG:K05540,RefSeq:WP_011272326.1,SO:0001217,UniParc:UPI000053E193,UniRef:UniRef100_Q4QLT1,UniRef:UniRef50_P44965,UniRef:UniRef90_P44965;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	1094834	1095133	.	+	.	ID=GCA000012185_01112_gene;locus_tag=GCA000012185_01112;gene=fis
contig_1	Pyrodigal	CDS	1094834	1095133	.	+	0	ID=GCA000012185_01112;Name=DNA-binding transcriptional regulator Fis;locus_tag=GCA000012185_01112;product=DNA-binding transcriptional regulator Fis;Dbxref=GO:0003700,GO:0043565,GO:0045893;gene=fis;Parent=GCA000012185_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2901,COG:K,RefSeq:WP_005647967.1,SO:0001217,UniParc:UPI000039AAAF,UniRef:UniRef100_Q4QLT0,UniRef:UniRef50_P57902,UniRef:UniRef90_P57902
contig_1	Pyrodigal	gene	1095234	1095719	.	-	.	ID=GCA000012185_01113_gene;locus_tag=GCA000012185_01113;gene=smpB
contig_1	Pyrodigal	CDS	1095234	1095719	.	-	0	ID=GCA000012185_01113;Name=SsrA-binding protein SmpB;locus_tag=GCA000012185_01113;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000012185_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_005647965.1,SO:0001217,UniParc:UPI000013601A,UniRef:UniRef100_P44967,UniRef:UniRef50_P0A832,UniRef:UniRef90_P44967
contig_1	Pyrodigal	gene	1095958	1096923	.	-	.	ID=GCA000012185_01114_gene;locus_tag=GCA000012185_01114;gene=pfkA
contig_1	Pyrodigal	CDS	1095958	1096923	.	-	0	ID=GCA000012185_01114;Name=6-phosphofructokinase;locus_tag=GCA000012185_01114;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0030388,GO:0046872,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000012185_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,KEGG:K00850,RefSeq:WP_011272327.1,SO:0001217,UniParc:UPI000053E194,UniRef:UniRef100_Q4QLS8,UniRef:UniRef50_O34529,UniRef:UniRef90_Q4QLS8;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	1097019	1097600	.	-	.	ID=GCA000012185_01115_gene;locus_tag=GCA000012185_01115
contig_1	Pyrodigal	CDS	1097019	1097600	.	-	0	ID=GCA000012185_01115;Name=putative protein HI_0983;locus_tag=GCA000012185_01115;product=putative protein HI_0983;Parent=GCA000012185_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272328.1,SO:0001217,UniParc:UPI000053E195,UniRef:UniRef100_A0AAJ8WAB5,UniRef:UniRef50_P43907,UniRef:UniRef90_P43907
contig_1	Pyrodigal	gene	1097593	1098369	.	-	.	ID=GCA000012185_01116_gene;locus_tag=GCA000012185_01116;gene=yaaA
contig_1	Pyrodigal	CDS	1097593	1098369	.	-	0	ID=GCA000012185_01116;Name=peroxide stress protein YaaA;locus_tag=GCA000012185_01116;product=peroxide stress protein YaaA;Dbxref=GO:0005829,GO:0033194;gene=yaaA;Parent=GCA000012185_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3022,COG:L,KEGG:K09861,RefSeq:WP_041174750.1,SO:0001217,UniParc:UPI00003CDADA,UniRef:UniRef100_Q4QLS6,UniRef:UniRef50_P0A8I3,UniRef:UniRef90_P43908
contig_1	Pyrodigal	gene	1098422	1099543	.	-	.	ID=GCA000012185_01117_gene;locus_tag=GCA000012185_01117;gene=dprA
contig_1	Pyrodigal	CDS	1098422	1099543	.	-	0	ID=GCA000012185_01117;Name=DNA-processing protein DprA;locus_tag=GCA000012185_01117;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000012185_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_011272330.1,SO:0001217,UniParc:UPI00003CDAD9,UniRef:UniRef100_Q4QLS5,UniRef:UniRef50_P43862,UniRef:UniRef90_P43862
contig_1	Pyrodigal	gene	1100087	1101634	.	+	.	ID=GCA000012185_01118_gene;locus_tag=GCA000012185_01118;gene=leuA
contig_1	Pyrodigal	CDS	1100087	1101634	.	+	0	ID=GCA000012185_01118;Name=2-isopropylmalate synthase;locus_tag=GCA000012185_01118;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0003985,GO:0005829,GO:0009098,GO:0019752,GO:0030145;gene=leuA;Parent=GCA000012185_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,KEGG:K01649,RefSeq:WP_011272331.1,SO:0001217,UniParc:UPI000053E197,UniRef:UniRef100_Q4QLS4,UniRef:UniRef50_P15875,UniRef:UniRef90_P43861;ec_number=2.3.3.13
contig_1	Pyrodigal	gene	1101797	1102873	.	+	.	ID=GCA000012185_01119_gene;locus_tag=GCA000012185_01119;gene=leuB
contig_1	Pyrodigal	CDS	1101797	1102873	.	+	0	ID=GCA000012185_01119;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000012185_01119;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0000287,GO:0003862,GO:0005829,GO:0009098,GO:0051287;gene=leuB;Parent=GCA000012185_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG0473,KEGG:K00052,RefSeq:WP_011272332.1,SO:0001217,UniParc:UPI00003CD709,UniRef:UniRef100_Q4QLS3,UniRef:UniRef50_P56933,UniRef:UniRef90_P43860;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	1103050	1104459	.	+	.	ID=GCA000012185_01120_gene;locus_tag=GCA000012185_01120;gene=leuC
contig_1	Pyrodigal	CDS	1103050	1104459	.	+	0	ID=GCA000012185_01120;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000012185_01120;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000012185_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0065,COG:E,KEGG:K01703,RefSeq:WP_011272333.1,SO:0001217,UniParc:UPI00003CD70A,UniRef:UniRef100_Q4QLS2,UniRef:UniRef50_P0A6A6,UniRef:UniRef90_P44968;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	1104484	1105086	.	+	.	ID=GCA000012185_01121_gene;locus_tag=GCA000012185_01121;gene=leuD
contig_1	Pyrodigal	CDS	1104484	1105086	.	+	0	ID=GCA000012185_01121;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000012185_01121;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000012185_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0066,COG:E,RefSeq:WP_011272334.1,SO:0001217,UniParc:UPI00003CD70B,UniRef:UniRef100_Q4QLS1,UniRef:UniRef50_Q65V08,UniRef:UniRef90_Q65V08;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	1105200	1110584	.	-	.	ID=GCA000012185_01122_gene;locus_tag=GCA000012185_01122
contig_1	Pyrodigal	CDS	1105200	1110584	.	-	0	ID=GCA000012185_01122;Name=Immunoglobulin A1 protease autotransporter;locus_tag=GCA000012185_01122;product=Immunoglobulin A1 protease autotransporter;Parent=GCA000012185_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01347,RefSeq:WP_011272335.1,SO:0001217,UniParc:UPI000053E198,UniRef:UniRef100_Q4QLS0,UniRef:UniRef50_P45386,UniRef:UniRef90_Q4QLS0;ec_number=3.4.21.72
contig_1	Pyrodigal	gene	1110811	1111890	.	-	.	ID=GCA000012185_01123_gene;locus_tag=GCA000012185_01123;gene=recF
contig_1	Pyrodigal	CDS	1110811	1111890	.	-	0	ID=GCA000012185_01123;Name=DNA replication/repair protein RecF;locus_tag=GCA000012185_01123;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000012185_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_005655969.1,SO:0001217,UniParc:UPI00003CD70D,UniRef:UniRef100_Q4QLR9,UniRef:UniRef50_P0A7H0,UniRef:UniRef90_P43767
contig_1	Pyrodigal	gene	1111892	1112992	.	-	.	ID=GCA000012185_01124_gene;locus_tag=GCA000012185_01124;gene=dnaN
contig_1	Pyrodigal	CDS	1111892	1112992	.	-	0	ID=GCA000012185_01124;Name=DNA polymerase III subunit beta;locus_tag=GCA000012185_01124;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009360;gene=dnaN;Parent=GCA000012185_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_011272336.1,SO:0001217,UniParc:UPI00003CD70E,UniRef:UniRef100_Q4QLR8,UniRef:UniRef50_P43744,UniRef:UniRef90_P43744;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1113185	1114549	.	-	.	ID=GCA000012185_01125_gene;locus_tag=GCA000012185_01125;gene=dnaA
contig_1	Pyrodigal	CDS	1113185	1114549	.	-	0	ID=GCA000012185_01125;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000012185_01125;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006260,GO:0006270,GO:0006275,GO:0016887;gene=dnaA;Parent=GCA000012185_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,RefSeq:WP_011272337.1,SO:0001217,UniParc:UPI00003CD70F,UniRef:UniRef100_A0AAJ8WQE8,UniRef:UniRef50_P43742,UniRef:UniRef90_P43742
contig_1	Pyrodigal	gene	1114736	1117474	.	-	.	ID=GCA000012185_01126_gene;locus_tag=GCA000012185_01126;gene=tbp1
contig_1	Pyrodigal	CDS	1114736	1117474	.	-	0	ID=GCA000012185_01126;Name=transferrin-binding protein Tbp1;locus_tag=GCA000012185_01126;product=transferrin-binding protein Tbp1;gene=tbp1;Parent=GCA000012185_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693337,COG:COG1629,COG:P,KEGG:K16087,RefSeq:WP_011272338.1,SO:0001217,UniParc:UPI000053E199,UniRef:UniRef100_Q4QLR6,UniRef:UniRef50_P44970,UniRef:UniRef90_Q4QLR6
contig_1	Pyrodigal	gene	1117519	1119411	.	-	.	ID=GCA000012185_01127_gene;locus_tag=GCA000012185_01127;gene=tbpB
contig_1	Pyrodigal	CDS	1117519	1119411	.	-	0	ID=GCA000012185_01127;Name=Slam-dependent surface lipoprotein;locus_tag=GCA000012185_01127;product=Slam-dependent surface lipoprotein;Dbxref=GO:0009279,GO:0009986;gene=tbpB;Parent=GCA000012185_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272339.1,SO:0001217,UniParc:UPI00003CD93F,UniRef:UniRef100_Q4QLR5,UniRef:UniRef50_Q4QLR5,UniRef:UniRef90_Q4QLR5
contig_1	Pyrodigal	gene	1119508	1120968	.	+	.	ID=GCA000012185_01128_gene;locus_tag=GCA000012185_01128
contig_1	Pyrodigal	CDS	1119508	1120968	.	+	0	ID=GCA000012185_01128;Name=Surface lipoprotein assembly modifier;locus_tag=GCA000012185_01128;product=Surface lipoprotein assembly modifier;Dbxref=GO:0009279;Parent=GCA000012185_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272340.1,SO:0001217,UniParc:UPI000053E19A,UniRef:UniRef100_Q4QLR4,UniRef:UniRef50_Q4QLR4,UniRef:UniRef90_Q4QLR4
contig_1	Pyrodigal	gene	1121144	1121278	.	+	.	ID=GCA000012185_01129_gene;locus_tag=GCA000012185_01129;gene=rpmH
contig_1	Pyrodigal	CDS	1121144	1121278	.	+	0	ID=GCA000012185_01129;Name=50S ribosomal protein L34;locus_tag=GCA000012185_01129;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA000012185_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_005539760.1,SO:0001217,UniParc:UPI0000133FAE,UniRef:UniRef100_P66244,UniRef:UniRef50_P66248,UniRef:UniRef90_A3N3N0
contig_1	Pyrodigal	gene	1121291	1121650	.	+	.	ID=GCA000012185_01130_gene;locus_tag=GCA000012185_01130;gene=rnpA
contig_1	Pyrodigal	CDS	1121291	1121650	.	+	0	ID=GCA000012185_01130;Name=ribonuclease P protein component;locus_tag=GCA000012185_01130;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0001682,GO:0004526,GO:0008033,GO:0030677,GO:0042780,GO:0042781;gene=rnpA;Parent=GCA000012185_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651622.1,SO:0001217,UniParc:UPI00003CDCFA,UniRef:UniRef100_Q4QLR2,UniRef:UniRef50_P0A7Y8,UniRef:UniRef90_P44306;ec_number=3.1.26.5
contig_1	Pyrodigal	gene	1121614	1121874	.	+	.	ID=GCA000012185_01131_gene;locus_tag=GCA000012185_01131;gene=yidD
contig_1	Pyrodigal	CDS	1121614	1121874	.	+	0	ID=GCA000012185_01131;Name=membrane protein insertion efficiency factor YidD;locus_tag=GCA000012185_01131;product=membrane protein insertion efficiency factor YidD;Dbxref=GO:0005886;gene=yidD;Parent=GCA000012185_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0759,COG:M,RefSeq:WP_005647910.1,SO:0001217,UniParc:UPI000013B3A9,UniRef:UniRef100_P44972,UniRef:UniRef50_P44972,UniRef:UniRef90_P44972
contig_1	Pyrodigal	gene	1121874	1123499	.	+	.	ID=GCA000012185_01132_gene;locus_tag=GCA000012185_01132;gene=yidC
contig_1	Pyrodigal	CDS	1121874	1123499	.	+	0	ID=GCA000012185_01132;Name=membrane protein insertase YidC;locus_tag=GCA000012185_01132;product=membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0016020,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000012185_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_005688355.1,SO:0001217,UniParc:UPI000053E19B,UniRef:UniRef100_Q4QLR0,UniRef:UniRef50_P44973,UniRef:UniRef90_P44973
contig_1	Pyrodigal	gene	1124370	1125728	.	+	.	ID=GCA000012185_01133_gene;locus_tag=GCA000012185_01133;gene=mnmE
contig_1	Pyrodigal	CDS	1124370	1125728	.	+	0	ID=GCA000012185_01133;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA000012185_01133;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0002098,GO:0003924,GO:0005515,GO:0005525,GO:0005737,GO:0005829,GO:0006400,GO:0030488,GO:0046872;gene=mnmE;Parent=GCA000012185_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0486,COG:J,RefSeq:WP_011272341.1,SO:0001217,UniParc:UPI00003CDA31,UniRef:UniRef100_Q4QLQ9,UniRef:UniRef50_P43730,UniRef:UniRef90_P43730;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	1125917	1127785	.	+	.	ID=GCA000012185_01134_gene;locus_tag=GCA000012185_01134;gene=ppiD
contig_1	Pyrodigal	CDS	1125917	1127785	.	+	0	ID=GCA000012185_01134;Name=Periplasmic chaperone PpiD;locus_tag=GCA000012185_01134;product=Periplasmic chaperone PpiD;Dbxref=GO:0003755,GO:0005886;gene=ppiD;Parent=GCA000012185_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_011272342.1,SO:0001217,UniParc:UPI000053E19C,UniRef:UniRef100_Q4QLQ8,UniRef:UniRef50_P44092,UniRef:UniRef90_P44092
contig_1	Pyrodigal	gene	1127873	1129432	.	+	.	ID=GCA000012185_01135_gene;locus_tag=GCA000012185_01135;gene=yhbX
contig_1	Pyrodigal	CDS	1127873	1129432	.	+	0	ID=GCA000012185_01135;Name=phosphoethanolamine transferase;locus_tag=GCA000012185_01135;product=phosphoethanolamine transferase;Dbxref=GO:0005886,GO:0009244,GO:0016776;gene=yhbX;Parent=GCA000012185_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,RefSeq:WP_011272343.1,SO:0001217,UniParc:UPI000053E19D,UniRef:UniRef100_Q4QLQ7,UniRef:UniRef50_P44974,UniRef:UniRef90_P44974,VFDB:VFC0258,VFDB:VFG013380;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	1129502	1130017	.	+	.	ID=GCA000012185_01136_gene;locus_tag=GCA000012185_01136;gene=lspA
contig_1	Pyrodigal	CDS	1129502	1130017	.	+	0	ID=GCA000012185_01136;Name=signal peptidase II;locus_tag=GCA000012185_01136;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA000012185_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_011272344.1,SO:0001217,UniParc:UPI000053E19E,UniRef:UniRef100_Q4QLQ6,UniRef:UniRef50_P44975,UniRef:UniRef90_P44975;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	1130014	1130958	.	+	.	ID=GCA000012185_01137_gene;locus_tag=GCA000012185_01137;gene=ispH
contig_1	Pyrodigal	CDS	1130014	1130958	.	+	0	ID=GCA000012185_01137;Name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;locus_tag=GCA000012185_01137;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;Dbxref=GO:0016114,GO:0019288,GO:0046872,GO:0050992,GO:0051539,GO:0051745;gene=ispH;Parent=GCA000012185_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0761,COG:I,KEGG:K03527,RefSeq:WP_005659294.1,SO:0001217,UniParc:UPI000053E19F,UniRef:UniRef100_Q4QLQ5,UniRef:UniRef50_P62623,UniRef:UniRef90_P44976;ec_number=1.17.7.4
contig_1	Pyrodigal	gene	1131127	1131474	.	+	.	ID=GCA000012185_01138_gene;locus_tag=GCA000012185_01138;gene=comEA
contig_1	Pyrodigal	CDS	1131127	1131474	.	+	0	ID=GCA000012185_01138;Name=ComE operon protein 1;locus_tag=GCA000012185_01138;product=ComE operon protein 1;gene=comEA;Parent=GCA000012185_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,RefSeq:WP_005690826.1,SO:0001217,UniParc:UPI000053E1A0,UniRef:UniRef100_A0A2S9RL70,UniRef:UniRef50_Q9CKF6,UniRef:UniRef90_A0A2S9RQZ5
contig_1	Infernal	regulatory_region	1131581	1131668	6.3e-10	+	.	ID=JPLKGDNPJF_109;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1131721	1132719	.	+	.	ID=GCA000012185_01139_gene;locus_tag=GCA000012185_01139;gene=thiB
contig_1	Pyrodigal	CDS	1131721	1132719	.	+	0	ID=GCA000012185_01139;Name=thiamine ABC transporter substrate binding subunit;locus_tag=GCA000012185_01139;product=thiamine ABC transporter substrate binding subunit;Dbxref=GO:0015888,GO:0030288,GO:0030975,GO:0030976,GO:0048502,GO:0055052,GO:0055085;gene=thiB;Parent=GCA000012185_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4143,COG:H,KEGG:K02064,RefSeq:WP_011272345.1,SO:0001217,UniParc:UPI000053E1A1,UniRef:UniRef100_A0A0D6H7A4,UniRef:UniRef50_P44984,UniRef:UniRef90_P44984
contig_1	Pyrodigal	gene	1132724	1134340	.	+	.	ID=GCA000012185_01140_gene;locus_tag=GCA000012185_01140;gene=thiP
contig_1	Pyrodigal	CDS	1132724	1134340	.	+	0	ID=GCA000012185_01140;Name=thiamine/thiamine pyrophosphate ABC transporter permease;locus_tag=GCA000012185_01140;product=thiamine/thiamine pyrophosphate ABC transporter permease;Dbxref=GO:0005886,GO:0015888,GO:0016020,GO:0022857,GO:0030974,GO:0048502;gene=thiP;Parent=GCA000012185_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02063,RefSeq:WP_011272346.1,SO:0001217,UniParc:UPI000053E1A2,UniRef:UniRef100_A0A2S9S6F4,UniRef:UniRef50_P44985,UniRef:UniRef90_P44985
contig_1	Pyrodigal	gene	1134324	1134971	.	+	.	ID=GCA000012185_01141_gene;locus_tag=GCA000012185_01141;gene=thiQ
contig_1	Pyrodigal	CDS	1134324	1134971	.	+	0	ID=GCA000012185_01141;Name=thiamine ABC transporter ATP-binding protein;locus_tag=GCA000012185_01141;product=thiamine ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015888,GO:0016020,GO:0016887,GO:0030974,GO:0048502;gene=thiQ;Parent=GCA000012185_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3840,COG:H,RefSeq:WP_038441405.1,SO:0001217,UniParc:UPI00003CD8E1,UniRef:UniRef100_Q4QLQ1,UniRef:UniRef50_Q4QLQ1,UniRef:UniRef90_Q4QLQ1;ec_number=7.6.2.15
contig_1	Pyrodigal	gene	1135084	1136085	.	+	.	ID=GCA000012185_01142_gene;locus_tag=GCA000012185_01142;gene=bioB
contig_1	Pyrodigal	CDS	1135084	1136085	.	+	0	ID=GCA000012185_01142;Name=biotin synthase BioB;locus_tag=GCA000012185_01142;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000012185_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_005655985.1,SO:0001217,UniParc:UPI000012695C,UniRef:UniRef100_P44987,UniRef:UniRef50_A9LZ69,UniRef:UniRef90_P44987;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	1136210	1138207	.	-	.	ID=GCA000012185_01143_gene;locus_tag=GCA000012185_01143;gene=tkt
contig_1	Pyrodigal	CDS	1136210	1138207	.	-	0	ID=GCA000012185_01143;Name=transketolase;locus_tag=GCA000012185_01143;product=transketolase;Dbxref=GO:0004802,GO:0005829,GO:0006098,GO:0046872;gene=tkt;Parent=GCA000012185_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_005688349.1,SO:0001217,UniParc:UPI000053E1A4,UniRef:UniRef100_A0A2S9RXX1,UniRef:UniRef50_P43757,UniRef:UniRef90_P43757;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	1138588	1139532	.	+	.	ID=GCA000012185_01144_gene;locus_tag=GCA000012185_01144;gene=serB
contig_1	Pyrodigal	CDS	1138588	1139532	.	+	0	ID=GCA000012185_01144;Name=phosphoserine phosphatase;locus_tag=GCA000012185_01144;product=phosphoserine phosphatase;Dbxref=GO:0000287,GO:0005737,GO:0006564,GO:0036424;gene=serB;Parent=GCA000012185_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0560,COG:E,KEGG:K01079,RefSeq:WP_005655988.1,SO:0001217,UniParc:UPI000039A3E5,UniRef:UniRef100_A0A0H3PF17,UniRef:UniRef50_P44997,UniRef:UniRef90_P44997;ec_number=3.1.3.3
contig_1	Pyrodigal	gene	1139550	1140041	.	+	.	ID=GCA000012185_01145_gene;locus_tag=GCA000012185_01145;gene=yajQ
contig_1	Pyrodigal	CDS	1139550	1140041	.	+	0	ID=GCA000012185_01145;Name=YajQ family cyclic di-GMP-binding protein;locus_tag=GCA000012185_01145;product=YajQ family cyclic di-GMP-binding protein;Dbxref=GO:0000166,GO:0005829;gene=yajQ;Parent=GCA000012185_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1666,COG:T,KEGG:K09767,RefSeq:WP_005651674.1,SO:0001217,UniParc:UPI000013A0FA,UniRef:UniRef100_P44096,UniRef:UniRef50_Q8ZC52,UniRef:UniRef90_P44096
contig_1	Infernal	gene	1140107	1140216	.	+	.	ID=GCA000012185_01146_gene;locus_tag=GCA000012185_01146;gene=AaHKsRNA54
contig_1	Infernal	ncRNA	1140107	1140216	8.8e-15	+	.	ID=GCA000012185_01146;Name=Aggregatibacter sRNA 54;locus_tag=GCA000012185_01146;product=Aggregatibacter sRNA 54;Dbxref=RFAM:RF02899;Parent=GCA000012185_01146_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02899
contig_1	Pyrodigal	gene	1140337	1141284	.	+	.	ID=GCA000012185_01147_gene;locus_tag=GCA000012185_01147;gene=corA
contig_1	Pyrodigal	CDS	1140337	1141284	.	+	0	ID=GCA000012185_01147;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000012185_01147;product=magnesium/cobalt transporter CorA;Dbxref=GO:0005886,GO:0006824,GO:0015087,GO:0015095,GO:0015099,GO:0015693,GO:0016020;gene=corA;Parent=GCA000012185_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_005655990.1,SO:0001217,UniParc:UPI000039A3E3,UniRef:UniRef100_Q4QLP6,UniRef:UniRef50_P0A2R8,UniRef:UniRef90_P44998
contig_1	Pyrodigal	gene	1141281	1141829	.	+	.	ID=GCA000012185_01148_gene;locus_tag=GCA000012185_01148;gene=ycf19
contig_1	Pyrodigal	CDS	1141281	1141829	.	+	0	ID=GCA000012185_01148;Name=putative protein HI_1036;locus_tag=GCA000012185_01148;product=putative protein HI_1036;Dbxref=GO:0005886;gene=ycf19;Parent=GCA000012185_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,SO:0001217,UniRef:UniRef50_P44097,UniRef:UniRef90_P44097
contig_1	Pyrodigal	gene	1142009	1142893	.	-	.	ID=GCA000012185_01149_gene;locus_tag=GCA000012185_01149;gene=yafJ
contig_1	Pyrodigal	CDS	1142009	1142893	.	-	0	ID=GCA000012185_01149;Name=Putative glutamine amidotransferase HI_1037;locus_tag=GCA000012185_01149;product=Putative glutamine amidotransferase HI_1037;Dbxref=GO:0016740;gene=yafJ;Parent=GCA000012185_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0121,COG:R,SO:0001217,UniParc:UPI000053E1A6,UniRef:UniRef100_Q4QLP4,UniRef:UniRef50_P44098,UniRef:UniRef90_P44098;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	1143050	1143517	.	-	.	ID=GCA000012185_01150_gene;locus_tag=GCA000012185_01150
contig_1	Pyrodigal	CDS	1143050	1143517	.	-	0	ID=GCA000012185_01150;Name=Lipoprotein;locus_tag=GCA000012185_01150;product=Lipoprotein;Parent=GCA000012185_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174752.1,SO:0001217,UniParc:UPI00003CDBE8,UniRef:UniRef100_Q4QLP3,UniRef:UniRef50_F9GRM0,UniRef:UniRef90_Q4QLP3
contig_1	Pyrodigal	gene	1143719	1144909	.	+	.	ID=GCA000012185_01151_gene;locus_tag=GCA000012185_01151
contig_1	Pyrodigal	CDS	1143719	1144909	.	+	0	ID=GCA000012185_01151;Name=putative protein HI_1038;locus_tag=GCA000012185_01151;product=putative protein HI_1038;Parent=GCA000012185_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1373,COG:R,KEGG:K07133,SO:0001217,UniRef:UniRef50_P44099,UniRef:UniRef90_P44099
contig_1	Pyrodigal	gene	1145099	1146433	.	-	.	ID=GCA000012185_01152_gene;locus_tag=GCA000012185_01152
contig_1	Pyrodigal	CDS	1145099	1146433	.	-	0	ID=GCA000012185_01152;Name=DUF262 domain-containing protein;locus_tag=GCA000012185_01152;product=DUF262 domain-containing protein;Parent=GCA000012185_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_224056793.1,SO:0001217,UniParc:UPI0002EEF092,UniRef:UniRef100_Q4QLP1,UniRef:UniRef50_Q4QLP1,UniRef:UniRef90_Q4QLP1
contig_1	Pyrodigal	gene	1146916	1147416	.	-	.	ID=GCA000012185_01153_gene;locus_tag=GCA000012185_01153;gene=napF
contig_1	Pyrodigal	CDS	1146916	1147416	.	-	0	ID=GCA000012185_01153;Name=ferredoxin-type protein NapF;locus_tag=GCA000012185_01153;product=ferredoxin-type protein NapF;Dbxref=GO:0005737,GO:0046872,GO:0051539;gene=napF;Parent=GCA000012185_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1143,RefSeq:WP_011272353.1,SO:0001217,UniParc:UPI00003CD73D,UniRef:UniRef100_Q4QLP0,UniRef:UniRef50_P44101,UniRef:UniRef90_P44101
contig_1	Pyrodigal	gene	1147416	1148027	.	-	.	ID=GCA000012185_01154_gene;locus_tag=GCA000012185_01154;gene=dmsD
contig_1	Pyrodigal	CDS	1147416	1148027	.	-	0	ID=GCA000012185_01154;Name=Tat proofreading chaperone DmsD;locus_tag=GCA000012185_01154;product=Tat proofreading chaperone DmsD;Dbxref=GO:0005048,GO:0061077;gene=dmsD;Parent=GCA000012185_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3381,COG:O,RefSeq:WP_011272354.1,SO:0001217,UniParc:UPI00003CD73C,UniRef:UniRef100_Q4QLN9,UniRef:UniRef50_P44102,UniRef:UniRef90_P44102
contig_1	Pyrodigal	gene	1148139	1148978	.	-	.	ID=GCA000012185_01155_gene;locus_tag=GCA000012185_01155;gene=dmsC
contig_1	Pyrodigal	CDS	1148139	1148978	.	-	0	ID=GCA000012185_01155;Name=Anaerobic dimethyl sulfoxide reductase chain C;locus_tag=GCA000012185_01155;product=Anaerobic dimethyl sulfoxide reductase chain C;Dbxref=GO:0005886,GO:0009061,GO:0009389,GO:0009390,GO:0019645;gene=dmsC;Parent=GCA000012185_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272355.1,SO:0001217,UniParc:UPI00003CD73B,UniRef:UniRef100_Q4QLN8,UniRef:UniRef50_P45002,UniRef:UniRef90_P45002
contig_1	Pyrodigal	gene	1148980	1149597	.	-	.	ID=GCA000012185_01156_gene;locus_tag=GCA000012185_01156;gene=dmsB
contig_1	Pyrodigal	CDS	1148980	1149597	.	-	0	ID=GCA000012185_01156;Name=DMSO/selenate family reductase complex B subunit;locus_tag=GCA000012185_01156;product=DMSO/selenate family reductase complex B subunit;Dbxref=GO:0046872,GO:0051539;gene=dmsB;Parent=GCA000012185_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07307,RefSeq:WP_011272356.1,SO:0001217,UniParc:UPI00003CD73A,UniRef:UniRef100_Q4QLN7,UniRef:UniRef50_P45003,UniRef:UniRef90_P45003;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	1149608	1152028	.	-	.	ID=GCA000012185_01157_gene;locus_tag=GCA000012185_01157;gene=dmsA
contig_1	Pyrodigal	CDS	1149608	1152028	.	-	0	ID=GCA000012185_01157;Name=Dimethyl sulfoxide reductase DmsA;locus_tag=GCA000012185_01157;product=Dimethyl sulfoxide reductase DmsA;Dbxref=GO:0005886,GO:0009055,GO:0009061,GO:0009389,GO:0030151,GO:0030288,GO:0043546,GO:0051539;gene=dmsA;Parent=GCA000012185_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_011272357.1,SO:0001217,UniParc:UPI000053E1AA,UniRef:UniRef100_Q4QLN6,UniRef:UniRef50_P18775,UniRef:UniRef90_P45004;ec_number=1.8.5.3
contig_1	Pyrodigal	gene	1152281	1153390	.	+	.	ID=GCA000012185_01158_gene;locus_tag=GCA000012185_01158
contig_1	Pyrodigal	CDS	1152281	1153390	.	+	0	ID=GCA000012185_01158;Name=Transglutaminase-like domain-containing protein;locus_tag=GCA000012185_01158;product=Transglutaminase-like domain-containing protein;Parent=GCA000012185_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272358.1,SO:0001217,UniParc:UPI00003CD737,UniRef:UniRef100_A0A2S9S6F1,UniRef:UniRef50_P44103,UniRef:UniRef90_A5UIH8
contig_1	Pyrodigal	gene	1153365	1153727	.	+	.	ID=GCA000012185_01159_gene;locus_tag=GCA000012185_01159;gene=merT
contig_1	Pyrodigal	CDS	1153365	1153727	.	+	0	ID=GCA000012185_01159;Name=Mercuric transport protein MerT;locus_tag=GCA000012185_01159;product=Mercuric transport protein MerT;gene=merT;Parent=GCA000012185_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656013.1,SO:0001217,UniParc:UPI000039A3D6,UniRef:UniRef100_A0A158SVR0,UniRef:UniRef50_Q06PV8,UniRef:UniRef90_Q714V5
contig_1	Pyrodigal	gene	1153736	1154014	.	+	.	ID=GCA000012185_01160_gene;locus_tag=GCA000012185_01160;gene=copZ
contig_1	Pyrodigal	CDS	1153736	1154014	.	+	0	ID=GCA000012185_01160;Name=putative protein HI_1050;locus_tag=GCA000012185_01160;product=putative protein HI_1050;Dbxref=GO:0046872;gene=copZ;Parent=GCA000012185_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_005651690.1,SO:0001217,UniParc:UPI00003CD736,UniRef:UniRef100_A0A1B8PE29,UniRef:UniRef50_P71365,UniRef:UniRef90_P71365
contig_1	Pyrodigal	gene	1154139	1155983	.	-	.	ID=GCA000012185_01161_gene;locus_tag=GCA000012185_01161;gene=mdlB
contig_1	Pyrodigal	CDS	1154139	1155983	.	-	0	ID=GCA000012185_01161;Name=putative ABC transporter ATP-binding protein HI_1051;locus_tag=GCA000012185_01161;product=putative ABC transporter ATP-binding protein HI_1051;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0034040,GO:0055085,GO:0140359;gene=mdlB;Parent=GCA000012185_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_011272359.1,SO:0001217,UniParc:UPI000053E1AB,UniRef:UniRef100_A0A2S9S6C9,UniRef:UniRef50_Q57180,UniRef:UniRef90_Q57180
contig_1	Pyrodigal	gene	1156062	1156958	.	-	.	ID=GCA000012185_01162_gene;locus_tag=GCA000012185_01162;gene=glxA
contig_1	Pyrodigal	CDS	1156062	1156958	.	-	0	ID=GCA000012185_01162;Name=putative HTH-type transcriptional regulator HI_1052;locus_tag=GCA000012185_01162;product=putative HTH-type transcriptional regulator HI_1052;Dbxref=GO:0003700,GO:0043565;gene=glxA;Parent=GCA000012185_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4977,COG:K,KEGG:K18991,RefSeq:WP_011272360.1,SO:0001217,UniParc:UPI00003CD734,UniRef:UniRef100_A0A0D6H5D4,UniRef:UniRef50_P45008,UniRef:UniRef90_P45008
contig_1	Pyrodigal	gene	1157070	1157411	.	+	.	ID=GCA000012185_01163_gene;locus_tag=GCA000012185_01163
contig_1	Pyrodigal	CDS	1157070	1157411	.	+	0	ID=GCA000012185_01163;Name=putative protein HI_1053;locus_tag=GCA000012185_01163;product=putative protein HI_1053;Dbxref=GO:0016491,GO:0051920;Parent=GCA000012185_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272361.1,SO:0001217,UniParc:UPI00003CD733,UniRef:UniRef100_A0A2S9S6E7,UniRef:UniRef50_Q57498,UniRef:UniRef90_Q57498
contig_1	Pyrodigal	gene	1157522	1158112	.	-	.	ID=GCA000012185_01164_gene;locus_tag=GCA000012185_01164;gene=resIII
contig_1	Pyrodigal	CDS	1157522	1158112	.	-	0	ID=GCA000012185_01164;Name=Helicase ATP-binding domain-containing protein;locus_tag=GCA000012185_01164;product=Helicase ATP-binding domain-containing protein;gene=resIII;Parent=GCA000012185_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3421,COG:V,SO:0001217,UniParc:UPI00003CD732,UniRef:UniRef100_A0AAJ8WDE3,UniRef:UniRef50_A0A0D0IFT9,UniRef:UniRef90_A0A0D0IFT9
contig_1	Pyrodigal	gene	1158124	1160289	.	-	.	ID=GCA000012185_01165_gene;locus_tag=GCA000012185_01165
contig_1	Pyrodigal	CDS	1158124	1160289	.	-	0	ID=GCA000012185_01165;Name=DEAD/DEAH box helicase family protein;locus_tag=GCA000012185_01165;product=DEAD/DEAH box helicase family protein;Parent=GCA000012185_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01156,SO:0001217,UniParc:UPI000053E1AD,UniRef:UniRef100_A0AAJ8WSA2,UniRef:UniRef50_A0AAJ8WSA2,UniRef:UniRef90_A0AAJ8WSA2;ec_number=3.1.21.5
contig_1	Pyrodigal	gene	1160279	1161619	.	-	.	ID=GCA000012185_01166_gene;locus_tag=GCA000012185_01166
contig_1	Pyrodigal	CDS	1160279	1161619	.	-	0	ID=GCA000012185_01166;Name=Methyltransferase;locus_tag=GCA000012185_01166;product=Methyltransferase;Parent=GCA000012185_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A378VJU9
contig_1	Pyrodigal	gene	1161638	1161859	.	+	.	ID=GCA000012185_01167_gene;locus_tag=GCA000012185_01167
contig_1	Pyrodigal	CDS	1161638	1161859	.	+	0	ID=GCA000012185_01167;Name=hypothetical protein;locus_tag=GCA000012185_01167;product=hypothetical protein;Parent=GCA000012185_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174754.1,SO:0001217,UniParc:UPI00003CD96E,UniRef:UniRef100_UPI00003CD96E,UniRef:UniRef50_UPI00003CD96E,UniRef:UniRef90_UPI00003CD96E
contig_1	Pyrodigal	gene	1161940	1162380	.	-	.	ID=GCA000012185_01168_gene;locus_tag=GCA000012185_01168
contig_1	Pyrodigal	CDS	1161940	1162380	.	-	0	ID=GCA000012185_01168;Name=Truncated Mod;locus_tag=GCA000012185_01168;product=Truncated Mod;Parent=GCA000012185_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174755.1,SO:0001217,UniParc:UPI00003CD96D,UniRef:UniRef100_UPI00003CD96D,UniRef:UniRef50_C6SBB6,UniRef:UniRef90_Q06IW7
contig_1	Pyrodigal	gene	1162596	1163189	.	-	.	ID=GCA000012185_01169_gene;locus_tag=GCA000012185_01169;gene=rnhB
contig_1	Pyrodigal	CDS	1162596	1163189	.	-	0	ID=GCA000012185_01169;Name=ribonuclease HII;locus_tag=GCA000012185_01169;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000012185_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,KEGG:K03470,RefSeq:WP_011272364.1,SO:0001217,UniParc:UPI00003CD96C,UniRef:UniRef100_Q4QLM7,UniRef:UniRef50_Q4QLM7,UniRef:UniRef90_Q4QLM7;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1163182	1164354	.	-	.	ID=GCA000012185_01170_gene;locus_tag=GCA000012185_01170;gene=lpxB
contig_1	Pyrodigal	CDS	1163182	1164354	.	-	0	ID=GCA000012185_01170;Name=lipid-A-disaccharide synthase;locus_tag=GCA000012185_01170;product=lipid-A-disaccharide synthase;Dbxref=GO:0005543,GO:0008915,GO:0009245,GO:0016020;gene=lpxB;Parent=GCA000012185_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0763,COG:M,KEGG:K00748,RefSeq:WP_011272365.1,SO:0001217,UniParc:UPI00003CD96B,UniRef:UniRef100_Q4QLM6,UniRef:UniRef50_P45011,UniRef:UniRef90_P45011,VFDB:VFC0258,VFDB:VFG013384;ec_number=2.4.1.182
contig_1	Pyrodigal	gene	1164421	1165209	.	-	.	ID=GCA000012185_01171_gene;locus_tag=GCA000012185_01171;gene=lpxA
contig_1	Pyrodigal	CDS	1164421	1165209	.	-	0	ID=GCA000012185_01171;Name=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;locus_tag=GCA000012185_01171;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;Dbxref=GO:0005737,GO:0008610,GO:0008780,GO:0009245,GO:0016020;gene=lpxA;Parent=GCA000012185_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1043,COG:M,RefSeq:WP_011272366.1,SO:0001217,UniParc:UPI000039A3CD,UniRef:UniRef100_Q4QLM5,UniRef:UniRef50_P43887,UniRef:UniRef90_P43887;ec_number=2.3.1.129
contig_1	Pyrodigal	gene	1165223	1165669	.	-	.	ID=GCA000012185_01172_gene;locus_tag=GCA000012185_01172;gene=fabZ
contig_1	Pyrodigal	CDS	1165223	1165669	.	-	0	ID=GCA000012185_01172;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA000012185_01172;product=3-hydroxyacyl-ACP dehydratase FabZ;Dbxref=GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171;gene=fabZ;Parent=GCA000012185_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,SO:0001217,UniParc:UPI000039A3CC,UniRef:UniRef100_Q4QLM4,UniRef:UniRef50_P45012,UniRef:UniRef90_P45012;ec_number=4.2.1.59
contig_1	Pyrodigal	gene	1165745	1167316	.	-	.	ID=GCA000012185_01173_gene;locus_tag=GCA000012185_01173;gene=opgE
contig_1	Pyrodigal	CDS	1165745	1167316	.	-	0	ID=GCA000012185_01173;Name=putative protein HI_1063;locus_tag=GCA000012185_01173;product=putative protein HI_1063;gene=opgE;Parent=GCA000012185_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,SO:0001217,UniRef:UniRef50_P71367,UniRef:UniRef90_P44107
contig_1	Pyrodigal	gene	1167445	1168158	.	+	.	ID=GCA000012185_01174_gene;locus_tag=GCA000012185_01174;gene=pyrH
contig_1	Pyrodigal	CDS	1167445	1168158	.	+	0	ID=GCA000012185_01174;Name=UMP kinase;locus_tag=GCA000012185_01174;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0005829,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000012185_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,KEGG:K09903,RefSeq:WP_005659351.1,SO:0001217,UniParc:UPI000053E1AF,UniRef:UniRef100_Q4QLM2,UniRef:UniRef50_P0A7E9,UniRef:UniRef90_P43890;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	1168397	1169362	.	-	.	ID=GCA000012185_01175_gene;locus_tag=GCA000012185_01175;gene=nrfD
contig_1	Pyrodigal	CDS	1168397	1169362	.	-	0	ID=GCA000012185_01175;Name=cytochrome c nitrite reductase subunit NrfD;locus_tag=GCA000012185_01175;product=cytochrome c nitrite reductase subunit NrfD;Dbxref=GO:0005886;gene=nrfD;Parent=GCA000012185_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3301,COG:P,KEGG:K04015,RefSeq:WP_011272369.1,SO:0001217,UniParc:UPI000053E1B0,UniRef:UniRef100_Q4QLM1,UniRef:UniRef50_P45014,UniRef:UniRef90_P45014;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	1169359	1170036	.	-	.	ID=GCA000012185_01176_gene;locus_tag=GCA000012185_01176;gene=nrfC
contig_1	Pyrodigal	CDS	1169359	1170036	.	-	0	ID=GCA000012185_01176;Name=cytochrome c nitrite reductase Fe-S protein;locus_tag=GCA000012185_01176;product=cytochrome c nitrite reductase Fe-S protein;Dbxref=GO:0016491,GO:0046872,GO:0051539;gene=nrfC;Parent=GCA000012185_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,KEGG:K04014,RefSeq:WP_005651710.1,SO:0001217,UniParc:UPI000053E1B1,UniRef:UniRef100_A4NWL7,UniRef:UniRef50_P0AAK7,UniRef:UniRef90_P45015;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	1170033	1170683	.	-	.	ID=GCA000012185_01177_gene;locus_tag=GCA000012185_01177;gene=nrfB
contig_1	Pyrodigal	CDS	1170033	1170683	.	-	0	ID=GCA000012185_01177;Name=cytochrome c nitrite reductase pentaheme subunit;locus_tag=GCA000012185_01177;product=cytochrome c nitrite reductase pentaheme subunit;Dbxref=GO:0008152,GO:0016491,GO:0020037,GO:0042597,GO:0046872;gene=nrfB;Parent=GCA000012185_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005686343.1,SO:0001217,UniParc:UPI00015457A6,UniRef:UniRef100_Q4QLL9,UniRef:UniRef50_P45016,UniRef:UniRef90_P45016;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	1170760	1172286	.	-	.	ID=GCA000012185_01178_gene;locus_tag=GCA000012185_01178;gene=nrfA
contig_1	Pyrodigal	CDS	1170760	1172286	.	-	0	ID=GCA000012185_01178;Name=ammonia-forming nitrite reductase cytochrome c552 subunit;locus_tag=GCA000012185_01178;product=ammonia-forming nitrite reductase cytochrome c552 subunit;Dbxref=GO:0005506,GO:0005509,GO:0008152,GO:0019645,GO:0020037,GO:0030288,GO:0042128,GO:0042279,GO:0042597;gene=nrfA;Parent=GCA000012185_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3303,COG:P,KEGG:K03385,RefSeq:WP_041174756.1,SO:0001217,UniParc:UPI0002F65B7C,UniRef:UniRef100_UPI0002F65B7C,UniRef:UniRef50_Q8EAC7,UniRef:UniRef90_P45017;ec_number=1.7.2.2
contig_1	Pyrodigal	gene	1172538	1176446	.	-	.	ID=GCA000012185_01179_gene;locus_tag=GCA000012185_01179;gene=hrpA
contig_1	Pyrodigal	CDS	1172538	1176446	.	-	0	ID=GCA000012185_01179;Name=ATP-dependent RNA helicase HrpA;locus_tag=GCA000012185_01179;product=ATP-dependent RNA helicase HrpA;Dbxref=GO:0003676,GO:0003689,GO:0003723,GO:0003724,GO:0004386,GO:0005524,GO:0016887,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=hrpA;Parent=GCA000012185_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1643,COG:J,RefSeq:WP_041174757.1,SO:0001217,UniParc:UPI000053E1B4,UniRef:UniRef100_Q4QLL7,UniRef:UniRef50_P45018,UniRef:UniRef90_P45018;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1176443	1176817	.	-	.	ID=GCA000012185_01180_gene;locus_tag=GCA000012185_01180;gene=ygdD
contig_1	Pyrodigal	CDS	1176443	1176817	.	-	0	ID=GCA000012185_01180;Name=UPF0382 membrane protein HI_1073;locus_tag=GCA000012185_01180;product=UPF0382 membrane protein HI_1073;Dbxref=GO:0005886;gene=ygdD;Parent=GCA000012185_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_005647722.1,SO:0001217,UniParc:UPI000039A3C4,UniRef:UniRef100_A0A0C5F6A7,UniRef:UniRef50_P45019,UniRef:UniRef90_P45019
contig_1	Pyrodigal	gene	1176818	1177270	.	-	.	ID=GCA000012185_01181_gene;locus_tag=GCA000012185_01181;gene=yeaL
contig_1	Pyrodigal	CDS	1176818	1177270	.	-	0	ID=GCA000012185_01181;Name=UPF0756 membrane protein CGSHiEE_06715;locus_tag=GCA000012185_01181;product=UPF0756 membrane protein CGSHiEE_06715;Dbxref=GO:0005886;gene=yeaL;Parent=GCA000012185_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2707,COG:S,RefSeq:WP_005665908.1,SO:0001217,UniParc:UPI000039A3C3,UniRef:UniRef100_Q4QLL5,UniRef:UniRef50_C6AMB3,UniRef:UniRef90_P44110
contig_1	Pyrodigal	gene	1177426	1177524	.	-	.	ID=GCA000012185_01182_gene;locus_tag=GCA000012185_01182
contig_1	Pyrodigal	CDS	1177426	1177524	.	-	0	ID=GCA000012185_01182;Name=Cytochrome bd oxidase small subunit%2C CydX/CbdX family;locus_tag=GCA000012185_01182;product=Cytochrome bd oxidase small subunit%2C CydX/CbdX family;Parent=GCA000012185_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000E60335,UniRef:UniRef100_A0A0H3PPN8,UniRef:UniRef50_Q7VKT8,UniRef:UniRef90_A0A0H3PPN8
contig_1	Pyrodigal	gene	1177536	1178672	.	-	.	ID=GCA000012185_01183_gene;locus_tag=GCA000012185_01183;gene=cydB
contig_1	Pyrodigal	CDS	1177536	1178672	.	-	0	ID=GCA000012185_01183;Name=cytochrome d ubiquinol oxidase subunit II;locus_tag=GCA000012185_01183;product=cytochrome d ubiquinol oxidase subunit II;Dbxref=GO:0005886,GO:0009055,GO:0016682,GO:0019646,GO:0046872,GO:0070069;gene=cydB;Parent=GCA000012185_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_011272373.1,SO:0001217,UniParc:UPI000053E1B5,UniRef:UniRef100_A0A2S9S712,UniRef:UniRef50_P0ABK2,UniRef:UniRef90_P45020;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	1178687	1180252	.	-	.	ID=GCA000012185_01184_gene;locus_tag=GCA000012185_01184;gene=appC
contig_1	Pyrodigal	CDS	1178687	1180252	.	-	0	ID=GCA000012185_01184;Name=putative cytochrome oxidase subunit 1;locus_tag=GCA000012185_01184;product=putative cytochrome oxidase subunit 1;Dbxref=GO:0005886,GO:0009055,GO:0016682,GO:0019646,GO:0020037,GO:0046872,GO:0070069;gene=appC;Parent=GCA000012185_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_011272374.1,SO:0001217,UniParc:UPI000053E1B6,UniRef:UniRef100_A0A2S9S723,UniRef:UniRef50_P0ABJ9,UniRef:UniRef90_P45021;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1180905	1182542	.	+	.	ID=GCA000012185_01185_gene;locus_tag=GCA000012185_01185;gene=pyrG
contig_1	Pyrodigal	CDS	1180905	1182542	.	+	0	ID=GCA000012185_01185;Name=glutamine hydrolyzing CTP synthase;locus_tag=GCA000012185_01185;product=glutamine hydrolyzing CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000012185_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,KEGG:K01937,RefSeq:WP_011272375.1,SO:0001217,UniParc:UPI000053E1B7,UniRef:UniRef100_Q4QLL2,UniRef:UniRef50_P0A7E5,UniRef:UniRef90_P44341;ec_number=6.3.4.2
contig_1	Pyrodigal	gene	1182687	1183367	.	-	.	ID=GCA000012185_01186_gene;locus_tag=GCA000012185_01186;gene=pnuC
contig_1	Pyrodigal	CDS	1182687	1183367	.	-	0	ID=GCA000012185_01186;Name=nicotinamide riboside transporter PnuC;locus_tag=GCA000012185_01186;product=nicotinamide riboside transporter PnuC;Dbxref=GO:0005886,GO:0015663,GO:0015890,GO:0016020,GO:0034257;gene=pnuC;Parent=GCA000012185_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3201,COG:H,KEGG:K03811,RefSeq:WP_005651723.1,SO:0001217,UniParc:UPI000053E1B8,UniRef:UniRef100_A0A2S9S756,UniRef:UniRef50_Q57425,UniRef:UniRef90_Q57425
contig_1	Pyrodigal	gene	1183549	1184316	.	-	.	ID=GCA000012185_01187_gene;locus_tag=GCA000012185_01187;gene=glnQ
contig_1	Pyrodigal	CDS	1183549	1184316	.	-	0	ID=GCA000012185_01187;Name=putative amino-acid ABC transporter ATP-binding protein HI_1078;locus_tag=GCA000012185_01187;product=putative amino-acid ABC transporter ATP-binding protein HI_1078;Dbxref=GO:0005524,GO:0005886,GO:0015424,GO:0016887;gene=glnQ;Parent=GCA000012185_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_005647711.1,SO:0001217,UniParc:UPI00014F7457,UniRef:UniRef100_A0A0H3PPP2,UniRef:UniRef50_P45022,UniRef:UniRef90_P45022
contig_1	Pyrodigal	gene	1184326	1185003	.	-	.	ID=GCA000012185_01188_gene;locus_tag=GCA000012185_01188;gene=hisM
contig_1	Pyrodigal	CDS	1184326	1185003	.	-	0	ID=GCA000012185_01188;Name=putative amino-acid ABC transporter permease protein HI_0179;locus_tag=GCA000012185_01188;product=putative amino-acid ABC transporter permease protein HI_0179;Dbxref=GO:0005886,GO:0015184,GO:0015811,GO:0043190;gene=hisM;Parent=GCA000012185_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,SO:0001217,UniParc:UPI000053E1B9,UniRef:UniRef100_P45023,UniRef:UniRef50_P45023,UniRef:UniRef90_P45023
contig_1	Pyrodigal	gene	1185026	1185799	.	-	.	ID=GCA000012185_01189_gene;locus_tag=GCA000012185_01189;gene=hisJ
contig_1	Pyrodigal	CDS	1185026	1185799	.	-	0	ID=GCA000012185_01189;Name=putative amino-acid ABC transporter-binding protein HI_1080;locus_tag=GCA000012185_01189;product=putative amino-acid ABC transporter-binding protein HI_1080;Dbxref=GO:0006865,GO:0042597;gene=hisJ;Parent=GCA000012185_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_005651725.1,SO:0001217,UniParc:UPI000039A3BC,UniRef:UniRef100_A0A1Q5Y5A6,UniRef:UniRef50_P45024,UniRef:UniRef90_P45024
contig_1	Pyrodigal	gene	1186100	1187374	.	-	.	ID=GCA000012185_01190_gene;locus_tag=GCA000012185_01190;gene=murA
contig_1	Pyrodigal	CDS	1186100	1187374	.	-	0	ID=GCA000012185_01190;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000012185_01190;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA;Parent=GCA000012185_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00790,RefSeq:WP_011272378.1,SO:0001217,UniParc:UPI00003CD9BD,UniRef:UniRef100_Q4QLK7,UniRef:UniRef50_P45025,UniRef:UniRef90_P45025;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	1187385	1187642	.	-	.	ID=GCA000012185_01191_gene;locus_tag=GCA000012185_01191;gene=ibaG
contig_1	Pyrodigal	CDS	1187385	1187642	.	-	0	ID=GCA000012185_01191;Name=putative protein HI_1082;locus_tag=GCA000012185_01191;product=putative protein HI_1082;gene=ibaG;Parent=GCA000012185_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5007,COG:T,RefSeq:WP_005647705.1,SO:0001217,UniParc:UPI000039A3BA,UniRef:UniRef100_A0A158SVU3,UniRef:UniRef50_P45026,UniRef:UniRef90_P45026
contig_1	Pyrodigal	gene	1187663	1187980	.	-	.	ID=GCA000012185_01192_gene;locus_tag=GCA000012185_01192;gene=mlaB
contig_1	Pyrodigal	CDS	1187663	1187980	.	-	0	ID=GCA000012185_01192;Name=Intermembrane phospholipid transport system binding protein MlaB;locus_tag=GCA000012185_01192;product=Intermembrane phospholipid transport system binding protein MlaB;Dbxref=GO:0005737;gene=mlaB;Parent=GCA000012185_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3113,COG:M,RefSeq:WP_005651726.1,SO:0001217,UniParc:UPI000039A3B9,UniRef:UniRef100_A0A0D0H0M7,UniRef:UniRef50_Q57407,UniRef:UniRef90_Q57407
contig_1	Pyrodigal	gene	1187991	1188635	.	-	.	ID=GCA000012185_01193_gene;locus_tag=GCA000012185_01193;gene=mlaC
contig_1	Pyrodigal	CDS	1187991	1188635	.	-	0	ID=GCA000012185_01193;Name=phospholipid-binding protein MlaC;locus_tag=GCA000012185_01193;product=phospholipid-binding protein MlaC;Dbxref=GO:0042597;gene=mlaC;Parent=GCA000012185_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2854,COG:M,KEGG:K07323,RefSeq:WP_011272379.1,SO:0001217,UniParc:UPI000039A3B8,UniRef:UniRef100_A0A2R3FXB6,UniRef:UniRef50_P45028,UniRef:UniRef90_P45028
contig_1	Pyrodigal	gene	1188668	1189168	.	-	.	ID=GCA000012185_01194_gene;locus_tag=GCA000012185_01194;gene=mlaD
contig_1	Pyrodigal	CDS	1188668	1189168	.	-	0	ID=GCA000012185_01194;Name=outer membrane lipid asymmetry maintenance protein MlaD;locus_tag=GCA000012185_01194;product=outer membrane lipid asymmetry maintenance protein MlaD;Dbxref=GO:0005886,GO:0015914,GO:0120010,GO:0120014;gene=mlaD;Parent=GCA000012185_01194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1463,COG:M,RefSeq:WP_005647699.1,SO:0001217,UniParc:UPI000039A3B7,UniRef:UniRef100_A0A1Q5Y557,UniRef:UniRef50_P45029,UniRef:UniRef90_P45029
contig_1	Pyrodigal	gene	1189178	1189963	.	-	.	ID=GCA000012185_01195_gene;locus_tag=GCA000012185_01195;gene=mlaE
contig_1	Pyrodigal	CDS	1189178	1189963	.	-	0	ID=GCA000012185_01195;Name=lipid asymmetry maintenance ABC transporter permease subunit MlaE;locus_tag=GCA000012185_01195;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;Dbxref=GO:0005548,GO:0005886,GO:0015914,GO:0043190;gene=mlaE;Parent=GCA000012185_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_011272380.1,SO:0001217,UniParc:UPI000039A3B6,UniRef:UniRef100_A0A2R3FYB8,UniRef:UniRef50_P64606,UniRef:UniRef90_P45030
contig_1	Pyrodigal	gene	1189960	1190754	.	-	.	ID=GCA000012185_01196_gene;locus_tag=GCA000012185_01196;gene=mlaF
contig_1	Pyrodigal	CDS	1189960	1190754	.	-	0	ID=GCA000012185_01196;Name=phospholipid ABC transporter ATP-binding protein MlaF;locus_tag=GCA000012185_01196;product=phospholipid ABC transporter ATP-binding protein MlaF;Dbxref=GO:0005524,GO:0005886,GO:0016887;gene=mlaF;Parent=GCA000012185_01196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1127,COG:M,RefSeq:WP_005651729.1,SO:0001217,UniParc:UPI000039A3B5,UniRef:UniRef100_A0A0D0IFW4,UniRef:UniRef50_P63386,UniRef:UniRef90_P45031;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1191160	1191807	.	-	.	ID=GCA000012185_01197_gene;locus_tag=GCA000012185_01197;gene=sodA
contig_1	Pyrodigal	CDS	1191160	1191807	.	-	0	ID=GCA000012185_01197;Name=superoxide dismutase [Mn];locus_tag=GCA000012185_01197;product=superoxide dismutase [Mn];Dbxref=GO:0004784,GO:0005737,GO:0006801,GO:0019430,GO:0046872;gene=sodA;Parent=GCA000012185_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_011272381.1,SO:0001217,UniParc:UPI000039A3B4,UniRef:UniRef100_A0A2S9S6Z3,UniRef:UniRef50_P43725,UniRef:UniRef90_P43725;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1192056	1192694	.	+	.	ID=GCA000012185_01198_gene;locus_tag=GCA000012185_01198;gene=ccmA
contig_1	Pyrodigal	CDS	1192056	1192694	.	+	0	ID=GCA000012185_01198;Name=cytochrome c biogenesis heme-transporting ATPase CcmA;locus_tag=GCA000012185_01198;product=cytochrome c biogenesis heme-transporting ATPase CcmA;Dbxref=GO:0005524,GO:0005886,GO:0015439,GO:0016887,GO:0017004,GO:0022857;gene=ccmA;Parent=GCA000012185_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4133,COG:O,RefSeq:WP_005656085.1,SO:0001217,UniParc:UPI000039A3B3,UniRef:UniRef100_Q4QLJ9,UniRef:UniRef50_P45032,UniRef:UniRef90_P45032;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	1192699	1193364	.	+	.	ID=GCA000012185_01199_gene;locus_tag=GCA000012185_01199;gene=ccmB
contig_1	Pyrodigal	CDS	1192699	1193364	.	+	0	ID=GCA000012185_01199;Name=heme exporter protein CcmB;locus_tag=GCA000012185_01199;product=heme exporter protein CcmB;Dbxref=GO:0005886,GO:0015232,GO:0015886,GO:0017004,GO:1903607;gene=ccmB;Parent=GCA000012185_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2386,COG:O,KEGG:K02194,RefSeq:WP_005651732.1,SO:0001217,UniParc:UPI000039A3B2,UniRef:UniRef100_A0A0H3PJZ9,UniRef:UniRef50_P0ABL8,UniRef:UniRef90_P45033;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1193425	1194165	.	+	.	ID=GCA000012185_01200_gene;locus_tag=GCA000012185_01200;gene=ccmC
contig_1	Pyrodigal	CDS	1193425	1194165	.	+	0	ID=GCA000012185_01200;Name=Heme exporter protein C;locus_tag=GCA000012185_01200;product=Heme exporter protein C;Dbxref=GO:0005886,GO:0015232,GO:0017004,GO:0020037;gene=ccmC;Parent=GCA000012185_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0755,COG:O,KEGG:K02195,RefSeq:WP_011272382.1,SO:0001217,UniParc:UPI000039A3B1,UniRef:UniRef100_A0A2S9S6Z5,UniRef:UniRef50_P45034,UniRef:UniRef90_P45034
contig_1	Pyrodigal	gene	1194208	1194411	.	+	.	ID=GCA000012185_01201_gene;locus_tag=GCA000012185_01201;gene=ccmD
contig_1	Pyrodigal	CDS	1194208	1194411	.	+	0	ID=GCA000012185_01201;Name=heme exporter protein CcmD;locus_tag=GCA000012185_01201;product=heme exporter protein CcmD;Dbxref=GO:0005886,GO:0015886,GO:0016020,GO:0017004,GO:1903607;gene=ccmD;Parent=GCA000012185_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3114,COG:U,RefSeq:WP_005634314.1,SO:0001217,UniParc:UPI000053E1BA,UniRef:UniRef100_A0A0M3FWD5,UniRef:UniRef50_P45035,UniRef:UniRef90_P45035;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1194408	1194929	.	+	.	ID=GCA000012185_01202_gene;locus_tag=GCA000012185_01202;gene=ccmE
contig_1	Pyrodigal	CDS	1194408	1194929	.	+	0	ID=GCA000012185_01202;Name=cytochrome c maturation protein CcmE;locus_tag=GCA000012185_01202;product=cytochrome c maturation protein CcmE;Dbxref=GO:0005886,GO:0017004,GO:0020037,GO:0046872;gene=ccmE;Parent=GCA000012185_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG2332,KEGG:K02197,RefSeq:WP_005651737.1,SO:0001217,UniParc:UPI000039A3AF,UniRef:UniRef100_Q4QLJ5,UniRef:UniRef50_P45036,UniRef:UniRef90_P45036
contig_1	Pyrodigal	gene	1194926	1196872	.	+	.	ID=GCA000012185_01203_gene;locus_tag=GCA000012185_01203;gene=ccmF
contig_1	Pyrodigal	CDS	1194926	1196872	.	+	0	ID=GCA000012185_01203;Name=Cytochrome c-type biogenesis protein CcmF;locus_tag=GCA000012185_01203;product=Cytochrome c-type biogenesis protein CcmF;Dbxref=GO:0005886,GO:0015232,GO:0017004,GO:0020037;gene=ccmF;Parent=GCA000012185_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG1138,RefSeq:WP_011272383.1,SO:0001217,UniParc:UPI000053E1BB,UniRef:UniRef100_Q4QLJ4,UniRef:UniRef50_P33927,UniRef:UniRef90_P45037
contig_1	Pyrodigal	gene	1197015	1197560	.	+	.	ID=GCA000012185_01204_gene;locus_tag=GCA000012185_01204;gene=dsbE
contig_1	Pyrodigal	CDS	1197015	1197560	.	+	0	ID=GCA000012185_01204;Name=Thiol:disulfide interchange protein DsbE;locus_tag=GCA000012185_01204;product=Thiol:disulfide interchange protein DsbE;Dbxref=GO:0005886,GO:0015036,GO:0017004,GO:0030288;gene=dsbE;Parent=GCA000012185_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005690739.1,SO:0001217,UniParc:UPI00003CD95E,UniRef:UniRef100_A0A0Y7IUC0,UniRef:UniRef50_P45038,UniRef:UniRef90_P45038
contig_1	Pyrodigal	gene	1197560	1198021	.	+	.	ID=GCA000012185_01205_gene;locus_tag=GCA000012185_01205;gene=nrfF
contig_1	Pyrodigal	CDS	1197560	1198021	.	+	0	ID=GCA000012185_01205;Name=Cytochrome c-type biogenesis protein;locus_tag=GCA000012185_01205;product=Cytochrome c-type biogenesis protein;gene=nrfF;Parent=GCA000012185_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG3088,RefSeq:WP_014550934.1,SO:0001217,UniParc:UPI000039A3AC,UniRef:UniRef100_A0A112VQ29,UniRef:UniRef50_A0A263HCI0,UniRef:UniRef90_A0A0D0ILY3
contig_1	Pyrodigal	gene	1198022	1198939	.	+	.	ID=GCA000012185_01206_gene;locus_tag=GCA000012185_01206;gene=ccmI
contig_1	Pyrodigal	CDS	1198022	1198939	.	+	0	ID=GCA000012185_01206;Name=C-type cytochrome biogenesis protein CcmI;locus_tag=GCA000012185_01206;product=C-type cytochrome biogenesis protein CcmI;gene=ccmI;Parent=GCA000012185_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4235,RefSeq:WP_014550933.1,SO:0001217,UniParc:UPI000039A3AB,UniRef:UniRef100_A0A0Y7IUC2,UniRef:UniRef50_A0A2V0S8Z9,UniRef:UniRef90_A0A2V0S8Z9
contig_1	Pyrodigal	gene	1199060	1199551	.	+	.	ID=GCA000012185_01207_gene;locus_tag=GCA000012185_01207
contig_1	Pyrodigal	CDS	1199060	1199551	.	+	0	ID=GCA000012185_01207;Name=Excinuclease ABC subunit A;locus_tag=GCA000012185_01207;product=Excinuclease ABC subunit A;Parent=GCA000012185_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272384.1,SO:0001217,UniParc:UPI000039A3AA,UniRef:UniRef100_A0A0Y7IU64,UniRef:UniRef50_F9GP36,UniRef:UniRef90_A0AAJ8WDD9
contig_1	Pyrodigal	gene	1199562	1199861	.	+	.	ID=GCA000012185_01208_gene;locus_tag=GCA000012185_01208
contig_1	Pyrodigal	CDS	1199562	1199861	.	+	0	ID=GCA000012185_01208;Name=putative protein HI_1099;locus_tag=GCA000012185_01208;product=putative protein HI_1099;Dbxref=GO:0016020;Parent=GCA000012185_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005647674.1,SO:0001217,UniParc:UPI00014F7BF8,UniRef:UniRef100_P44112,UniRef:UniRef50_P44112,UniRef:UniRef90_P44112
contig_1	Pyrodigal	gene	1199866	1201878	.	-	.	ID=GCA000012185_01209_gene;locus_tag=GCA000012185_01209;gene=ligA
contig_1	Pyrodigal	CDS	1199866	1201878	.	-	0	ID=GCA000012185_01209;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000012185_01209;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000012185_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_011272385.1,SO:0001217,UniParc:UPI000039A3A9,UniRef:UniRef100_Q4QLJ0,UniRef:UniRef50_P43813,UniRef:UniRef90_P43813;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	1201990	1202976	.	-	.	ID=GCA000012185_01210_gene;locus_tag=GCA000012185_01210;gene=zipA
contig_1	Pyrodigal	CDS	1201990	1202976	.	-	0	ID=GCA000012185_01210;Name=cell division protein ZipA;locus_tag=GCA000012185_01210;product=cell division protein ZipA;Dbxref=GO:0000917,GO:0005515,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=zipA;Parent=GCA000012185_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3115,COG:D,KEGG:K03528,RefSeq:WP_005690727.1,SO:0001217,UniParc:UPI000039A3A8,UniRef:UniRef100_Q4QLI9,UniRef:UniRef50_P44113,UniRef:UniRef90_P44113
contig_1	Pyrodigal	gene	1203129	1203947	.	+	.	ID=GCA000012185_01211_gene;locus_tag=GCA000012185_01211;gene=cysZ
contig_1	Pyrodigal	CDS	1203129	1203947	.	+	0	ID=GCA000012185_01211;Name=sulfate transporter CysZ;locus_tag=GCA000012185_01211;product=sulfate transporter CysZ;Dbxref=GO:0000103,GO:0005886,GO:0009675,GO:0015116,GO:0019344;gene=cysZ;Parent=GCA000012185_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2981,COG:EP,KEGG:K06203,RefSeq:WP_011272386.1,SO:0001217,UniParc:UPI000053E1BD,UniRef:UniRef100_Q4QLI8,UniRef:UniRef50_P45039,UniRef:UniRef90_P45039
contig_1	Pyrodigal	gene	1204046	1204996	.	+	.	ID=GCA000012185_01212_gene;locus_tag=GCA000012185_01212;gene=cysK
contig_1	Pyrodigal	CDS	1204046	1204996	.	+	0	ID=GCA000012185_01212;Name=cysteine synthase A;locus_tag=GCA000012185_01212;product=cysteine synthase A;Dbxref=GO:0004124,GO:0005737,GO:0006535,GO:0080146;gene=cysK;Parent=GCA000012185_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_005690723.1,SO:0001217,UniParc:UPI000039A3A6,UniRef:UniRef100_A0A0Y7HMG8,UniRef:UniRef50_P0ABK5,UniRef:UniRef90_P45040;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	1205244	1205984	.	+	.	ID=GCA000012185_01213_gene;locus_tag=GCA000012185_01213
contig_1	Pyrodigal	CDS	1205244	1205984	.	+	0	ID=GCA000012185_01213;Name=Sialic acid permease;locus_tag=GCA000012185_01213;product=Sialic acid permease;Parent=GCA000012185_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A4U9DHM8
contig_1	Pyrodigal	gene	1205968	1206468	.	+	.	ID=GCA000012185_01214_gene;locus_tag=GCA000012185_01214;gene=araJ;pseudogene=unitary
contig_1	Pyrodigal	CDS	1205968	1206468	.	+	0	ID=GCA000012185_01214;Name=Putative metabolite transport protein HI_1104;locus_tag=GCA000012185_01214;product=Putative metabolite transport protein HI_1104;Dbxref=GO:0005886,GO:0046942,GO:0046943;pseudogene=unitary;gene=araJ;Parent=GCA000012185_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,SO:0001217,UniRef:UniRef50_P71369,UniRef:UniRef90_P71369
contig_1	Pyrodigal	gene	1206577	1207617	.	-	.	ID=GCA000012185_01215_gene;locus_tag=GCA000012185_01215;gene=rfaF
contig_1	Pyrodigal	CDS	1206577	1207617	.	-	0	ID=GCA000012185_01215;Name=ADP-heptose-LPS heptosyltransferase II;locus_tag=GCA000012185_01215;product=ADP-heptose-LPS heptosyltransferase II;Dbxref=GO:0005829,GO:0008713,GO:0008920,GO:0009103,GO:0009244,GO:0016757;gene=rfaF;Parent=GCA000012185_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,KEGG:K02843,RefSeq:WP_011272387.1,SO:0001217,UniParc:UPI000039A3A4,UniRef:UniRef100_A0A0Y7ITK3,UniRef:UniRef50_Q7VNA4,UniRef:UniRef90_P45042,VFDB:VFC0258,VFDB:VFG013400;ec_number=2.4.99.24
contig_1	Pyrodigal	gene	1207693	1208856	.	-	.	ID=GCA000012185_01216_gene;locus_tag=GCA000012185_01216;gene=xylR
contig_1	Pyrodigal	CDS	1207693	1208856	.	-	0	ID=GCA000012185_01216;Name=Xylose operon regulatory protein;locus_tag=GCA000012185_01216;product=Xylose operon regulatory protein;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=xylR;Parent=GCA000012185_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_011272388.1,SO:0001217,UniParc:UPI000039A3A3,UniRef:UniRef100_A0A1Q5Y536,UniRef:UniRef50_P45043,UniRef:UniRef90_P45043
contig_1	Pyrodigal	gene	1208968	1210374	.	-	.	ID=GCA000012185_01217_gene;locus_tag=GCA000012185_01217;gene=nhaC
contig_1	Pyrodigal	CDS	1208968	1210374	.	-	0	ID=GCA000012185_01217;Name=Na+/H+ antiporter NhaC;locus_tag=GCA000012185_01217;product=Na+/H+ antiporter NhaC;Dbxref=GO:0005886,GO:0006814,GO:0015297,GO:0015385,GO:0016020,GO:1902600;gene=nhaC;Parent=GCA000012185_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K03315,RefSeq:WP_005651758.1,SO:0001217,UniParc:UPI000039A3A2,UniRef:UniRef100_A0A2R3FNE0,UniRef:UniRef50_Q57007,UniRef:UniRef90_Q57007
contig_1	Pyrodigal	gene	1210376	1211548	.	-	.	ID=GCA000012185_01218_gene;locus_tag=GCA000012185_01218;gene=malY
contig_1	Pyrodigal	CDS	1210376	1211548	.	-	0	ID=GCA000012185_01218;Name=cysteine-S-conjugate beta-lyase;locus_tag=GCA000012185_01218;product=cysteine-S-conjugate beta-lyase;gene=malY;Parent=GCA000012185_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1168,COG:ER,RefSeq:WP_011272389.1,SO:0001217,UniParc:UPI000039A3A1,UniRef:UniRef100_A0A2R3FYI9,UniRef:UniRef50_A0A1V4AYS4,UniRef:UniRef90_A0A3S4VIB1
contig_1	Pyrodigal	gene	1211761	1213080	.	+	.	ID=GCA000012185_01219_gene;locus_tag=GCA000012185_01219;gene=xylA
contig_1	Pyrodigal	CDS	1211761	1213080	.	+	0	ID=GCA000012185_01219;Name=xylose isomerase;locus_tag=GCA000012185_01219;product=xylose isomerase;Dbxref=GO:0000287,GO:0005737,GO:0009045,GO:0042732,GO:0042843;gene=xylA;Parent=GCA000012185_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2115,COG:G,KEGG:K01805,RefSeq:WP_005690713.1,SO:0001217,UniParc:UPI000039A3A0,UniRef:UniRef100_Q4QLI2,UniRef:UniRef50_P00944,UniRef:UniRef90_P44398;ec_number=5.3.1.5
contig_1	Pyrodigal	gene	1213137	1214618	.	+	.	ID=GCA000012185_01220_gene;locus_tag=GCA000012185_01220;gene=xylB
contig_1	Pyrodigal	CDS	1213137	1214618	.	+	0	ID=GCA000012185_01220;Name=xylulokinase;locus_tag=GCA000012185_01220;product=xylulokinase;Dbxref=GO:0004856,GO:0005524,GO:0005997,GO:0005998,GO:0042732;gene=xylB;Parent=GCA000012185_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K00854,RefSeq:WP_032826718.1,SO:0001217,UniParc:UPI000039A39F,UniRef:UniRef100_A0A3E1QNW9,UniRef:UniRef50_P44401,UniRef:UniRef90_P44401;ec_number=2.7.1.17
contig_1	Pyrodigal	gene	1214669	1215595	.	-	.	ID=GCA000012185_01221_gene;locus_tag=GCA000012185_01221;gene=rfaD
contig_1	Pyrodigal	CDS	1214669	1215595	.	-	0	ID=GCA000012185_01221;Name=ADP-L-glycero-D-mannoheptose-6-epimerase;locus_tag=GCA000012185_01221;product=ADP-L-glycero-D-mannoheptose-6-epimerase;Dbxref=GO:0005975,GO:0008712,GO:0050661,GO:0097171;gene=rfaD;Parent=GCA000012185_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,KEGG:K03274,RefSeq:WP_005690709.1,SO:0001217,UniParc:UPI000039A39E,UniRef:UniRef100_Q4QLI0,UniRef:UniRef50_Q7VZF5,UniRef:UniRef90_P45048,VFDB:VFC0258,VFDB:VFG000332;ec_number=5.1.3.20
contig_1	Pyrodigal	gene	1215648	1216151	.	-	.	ID=GCA000012185_01222_gene;locus_tag=GCA000012185_01222;gene=trxA
contig_1	Pyrodigal	CDS	1215648	1216151	.	-	0	ID=GCA000012185_01222;Name=Thioredoxin-like protein HI_1115;locus_tag=GCA000012185_01222;product=Thioredoxin-like protein HI_1115;Dbxref=GO:0005886,GO:0015036,GO:0016209;gene=trxA;Parent=GCA000012185_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005686413.1,SO:0001217,UniParc:UPI000045E815,UniRef:UniRef100_A0A112VPM3,UniRef:UniRef50_P43787,UniRef:UniRef90_P43787
contig_1	Pyrodigal	gene	1216262	1216933	.	+	.	ID=GCA000012185_01223_gene;locus_tag=GCA000012185_01223;gene=deoC
contig_1	Pyrodigal	CDS	1216262	1216933	.	+	0	ID=GCA000012185_01223;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000012185_01223;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000012185_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,RefSeq:WP_005690707.1,SO:0001217,UniParc:UPI000039A39C,UniRef:UniRef100_Q4QLH8,UniRef:UniRef50_P44430,UniRef:UniRef90_P44430;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	1216967	1218496	.	-	.	ID=GCA000012185_01224_gene;locus_tag=GCA000012185_01224;gene=comM
contig_1	Pyrodigal	CDS	1216967	1218496	.	-	0	ID=GCA000012185_01224;Name=YifB family Mg chelatase-like AAA ATPase;locus_tag=GCA000012185_01224;product=YifB family Mg chelatase-like AAA ATPase;Dbxref=GO:0003677,GO:0005524,GO:0016887,GO:0030420,GO:0032508;gene=comM;Parent=GCA000012185_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0606,COG:O,RefSeq:WP_011272390.1,SO:0001217,UniParc:UPI00003CD847,UniRef:UniRef100_Q4QLH7,UniRef:UniRef50_P45049,UniRef:UniRef90_P45049
contig_1	Pyrodigal	gene	1218611	1219228	.	-	.	ID=GCA000012185_01225_gene;locus_tag=GCA000012185_01225;gene=yihA
contig_1	Pyrodigal	CDS	1218611	1219228	.	-	0	ID=GCA000012185_01225;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA000012185_01225;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0042254,GO:0043022,GO:0046872;gene=yihA;Parent=GCA000012185_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_011272391.1,SO:0001217,UniParc:UPI000053E1BF,UniRef:UniRef100_Q4QLH6,UniRef:UniRef50_Q8E8J7,UniRef:UniRef90_P46453
contig_1	Pyrodigal	gene	1219321	1220199	.	+	.	ID=GCA000012185_01226_gene;locus_tag=GCA000012185_01226;gene=virK
contig_1	Pyrodigal	CDS	1219321	1220199	.	+	0	ID=GCA000012185_01226;Name=putative protein HI_1119;locus_tag=GCA000012185_01226;product=putative protein HI_1119;Dbxref=GO:0006974;gene=virK;Parent=GCA000012185_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2990,COG:S,KEGG:K09824,SO:0001217,UniParc:UPI00003CDA4D,UniRef:UniRef100_A5UIP3,UniRef:UniRef50_Q57273,UniRef:UniRef90_Q57273
contig_1	Pyrodigal	gene	1220239	1221237	.	-	.	ID=GCA000012185_01227_gene;locus_tag=GCA000012185_01227;gene=oppF
contig_1	Pyrodigal	CDS	1220239	1221237	.	-	0	ID=GCA000012185_01227;Name=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;locus_tag=GCA000012185_01227;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887,GO:0055085;gene=oppF;Parent=GCA000012185_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_005657282.1,SO:0001217,UniParc:UPI0000130D8B,UniRef:UniRef100_P45051,UniRef:UniRef50_P77737,UniRef:UniRef90_P45051;ec_number=7.4.2.6
contig_1	Pyrodigal	gene	1221234	1222205	.	-	.	ID=GCA000012185_01228_gene;locus_tag=GCA000012185_01228;gene=oppD
contig_1	Pyrodigal	CDS	1221234	1222205	.	-	0	ID=GCA000012185_01228;Name=Oligopeptide transport ATP-binding protein OppD;locus_tag=GCA000012185_01228;product=Oligopeptide transport ATP-binding protein OppD;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=oppD;Parent=GCA000012185_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_005647625.1,SO:0001217,UniParc:UPI000039A398,UniRef:UniRef100_A0A121XRV4,UniRef:UniRef50_P45052,UniRef:UniRef90_P45052;ec_number=7.4.2.6
contig_1	Pyrodigal	gene	1222215	1223150	.	-	.	ID=GCA000012185_01229_gene;locus_tag=GCA000012185_01229;gene=oppC
contig_1	Pyrodigal	CDS	1222215	1223150	.	-	0	ID=GCA000012185_01229;Name=oligopeptide ABC transporter permease OppC;locus_tag=GCA000012185_01229;product=oligopeptide ABC transporter permease OppC;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0055085;gene=oppC;Parent=GCA000012185_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_011272393.1,SO:0001217,UniParc:UPI00003CDB9F,UniRef:UniRef100_Q4QLH2,UniRef:UniRef50_P45053,UniRef:UniRef90_P45053;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1223160	1224080	.	-	.	ID=GCA000012185_01230_gene;locus_tag=GCA000012185_01230;gene=oppB
contig_1	Pyrodigal	CDS	1223160	1224080	.	-	0	ID=GCA000012185_01230;Name=oligopeptide ABC transporter permease OppB;locus_tag=GCA000012185_01230;product=oligopeptide ABC transporter permease OppB;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0016020,GO:0055085;gene=oppB;Parent=GCA000012185_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_005690699.1,SO:0001217,UniParc:UPI000053E1C0,UniRef:UniRef100_A0A0Y7IS12,UniRef:UniRef50_P0AFH2,UniRef:UniRef90_P45054;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1224161	1225786	.	-	.	ID=GCA000012185_01231_gene;locus_tag=GCA000012185_01231;gene=oppA
contig_1	Pyrodigal	CDS	1224161	1225786	.	-	0	ID=GCA000012185_01231;Name=Periplasmic oligopeptide-binding protein OppA;locus_tag=GCA000012185_01231;product=Periplasmic oligopeptide-binding protein OppA;Dbxref=GO:0015031,GO:0015833,GO:0030288,GO:0043190,GO:1904680;gene=oppA;Parent=GCA000012185_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_011272394.1,SO:0001217,UniParc:UPI00003CDB5E,UniRef:UniRef100_A0A112VPD4,UniRef:UniRef50_P71370,UniRef:UniRef90_P71370
contig_1	Pyrodigal	gene	1226081	1227034	.	+	.	ID=GCA000012185_01232_gene;locus_tag=GCA000012185_01232;gene=tal
contig_1	Pyrodigal	CDS	1226081	1227034	.	+	0	ID=GCA000012185_01232;Name=transaldolase;locus_tag=GCA000012185_01232;product=transaldolase;Dbxref=GO:0004801,GO:0005737,GO:0005829,GO:0005975,GO:0006098;gene=tal;Parent=GCA000012185_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,KEGG:K00616,RefSeq:WP_011272395.1,SO:0001217,UniParc:UPI000039A394,UniRef:UniRef100_Q4QLG9,UniRef:UniRef50_P45055,UniRef:UniRef90_P45055;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	1228110	1229696	.	+	.	ID=GCA000012185_01233_gene;locus_tag=GCA000012185_01233;gene=cstA
contig_1	Pyrodigal	CDS	1228110	1229696	.	+	0	ID=GCA000012185_01233;Name=CstA N-terminal domain-containing protein;locus_tag=GCA000012185_01233;product=CstA N-terminal domain-containing protein;gene=cstA;Parent=GCA000012185_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG1966,RefSeq:WP_005686425.1,SO:0001217,UniParc:UPI0001A3F35D,UniRef:UniRef100_Q4QLG8,UniRef:UniRef50_A3N1P1,UniRef:UniRef90_A4NY46
contig_1	Pyrodigal	gene	1229898	1230353	.	+	.	ID=GCA000012185_01234_gene;locus_tag=GCA000012185_01234;gene=mraZ
contig_1	Pyrodigal	CDS	1229898	1230353	.	+	0	ID=GCA000012185_01234;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000012185_01234;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000012185_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_005686427.1,SO:0001217,UniParc:UPI000012F543,UniRef:UniRef100_P45056,UniRef:UniRef50_C5B9E7,UniRef:UniRef90_P45056
contig_1	Pyrodigal	gene	1230384	1231349	.	+	.	ID=GCA000012185_01235_gene;locus_tag=GCA000012185_01235;gene=rsmH
contig_1	Pyrodigal	CDS	1230384	1231349	.	+	0	ID=GCA000012185_01235;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000012185_01235;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000012185_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,KEGG:K03438,RefSeq:WP_005686428.1,SO:0001217,UniParc:UPI00003CD730,UniRef:UniRef100_Q4QLG6,UniRef:UniRef50_B7VIZ5,UniRef:UniRef90_P45057;ec_number=2.1.1.199
contig_1	Pyrodigal	gene	1231352	1231675	.	+	.	ID=GCA000012185_01236_gene;locus_tag=GCA000012185_01236;gene=ftsL
contig_1	Pyrodigal	CDS	1231352	1231675	.	+	0	ID=GCA000012185_01236;Name=cell division protein FtsL;locus_tag=GCA000012185_01236;product=cell division protein FtsL;Dbxref=GO:0000910,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=ftsL;Parent=GCA000012185_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3116,COG:D,KEGG:K03586,RefSeq:WP_005647600.1,SO:0001217,UniParc:UPI000012ACE6,UniRef:UniRef100_P45058,UniRef:UniRef50_P45058,UniRef:UniRef90_P45058
contig_1	Pyrodigal	gene	1231688	1233520	.	+	.	ID=GCA000012185_01237_gene;locus_tag=GCA000012185_01237;gene=ftsI
contig_1	Pyrodigal	CDS	1231688	1233520	.	+	0	ID=GCA000012185_01237;Name=Peptidoglycan D%2CD-transpeptidase FtsI;locus_tag=GCA000012185_01237;product=Peptidoglycan D%2CD-transpeptidase FtsI;Dbxref=GO:0000917,GO:0005886,GO:0006508,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0043093,GO:0071555;gene=ftsI;Parent=GCA000012185_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,RefSeq:WP_011272397.1,SO:0001217,UniParc:UPI000053E1C2,UniRef:UniRef100_Q4QLG4,UniRef:UniRef50_P45059,UniRef:UniRef90_P45059;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	1233530	1234996	.	+	.	ID=GCA000012185_01238_gene;locus_tag=GCA000012185_01238;gene=murE
contig_1	Pyrodigal	CDS	1233530	1234996	.	+	0	ID=GCA000012185_01238;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;locus_tag=GCA000012185_01238;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0008360,GO:0008765,GO:0009058,GO:0009252,GO:0016881,GO:0051301,GO:0071555;gene=murE;Parent=GCA000012185_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_011272398.1,SO:0001217,UniParc:UPI000039A38F,UniRef:UniRef100_Q4QLG3,UniRef:UniRef50_P45060,UniRef:UniRef90_P45060;ec_number=6.3.2.13
contig_1	Pyrodigal	gene	1235010	1236383	.	+	.	ID=GCA000012185_01239_gene;locus_tag=GCA000012185_01239;gene=murF
contig_1	Pyrodigal	CDS	1235010	1236383	.	+	0	ID=GCA000012185_01239;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000012185_01239;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008766,GO:0009058,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000012185_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,RefSeq:WP_005686434.1,SO:0001217,UniParc:UPI000039A38E,UniRef:UniRef100_A0A2R3GIH8,UniRef:UniRef50_P45061,UniRef:UniRef90_P45061;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	1236377	1237459	.	+	.	ID=GCA000012185_01240_gene;locus_tag=GCA000012185_01240;gene=mraY
contig_1	Pyrodigal	CDS	1236377	1237459	.	+	0	ID=GCA000012185_01240;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000012185_01240;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0044038,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000012185_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K01000,RefSeq:WP_005690686.1,SO:0001217,UniParc:UPI000039A38D,UniRef:UniRef100_Q4QLG1,UniRef:UniRef50_P0A6W3,UniRef:UniRef90_P45062;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	1237571	1238884	.	+	.	ID=GCA000012185_01241_gene;locus_tag=GCA000012185_01241;gene=murD
contig_1	Pyrodigal	CDS	1237571	1238884	.	+	0	ID=GCA000012185_01241;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000012185_01241;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000012185_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0771,COG:M,RefSeq:WP_005690684.1,SO:0001217,UniParc:UPI000039A38C,UniRef:UniRef100_Q4QLG0,UniRef:UniRef50_Q8ZRU4,UniRef:UniRef90_P45063;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	1238907	1240091	.	+	.	ID=GCA000012185_01242_gene;locus_tag=GCA000012185_01242;gene=ftsW
contig_1	Pyrodigal	CDS	1238907	1240091	.	+	0	ID=GCA000012185_01242;Name=putative lipid II flippase FtsW;locus_tag=GCA000012185_01242;product=putative lipid II flippase FtsW;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0015648,GO:0016020,GO:0032153,GO:0043093,GO:0051301,GO:0071555;gene=ftsW;Parent=GCA000012185_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_005661306.1,SO:0001217,UniParc:UPI000039A38B,UniRef:UniRef100_A0A1Q5Y5B7,UniRef:UniRef50_P45064,UniRef:UniRef90_P45064;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1240103	1241158	.	+	.	ID=GCA000012185_01243_gene;locus_tag=GCA000012185_01243;gene=murG
contig_1	Pyrodigal	CDS	1240103	1241158	.	+	0	ID=GCA000012185_01243;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000012185_01243;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000012185_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_005690682.1,SO:0001217,UniParc:UPI000039A38A,UniRef:UniRef100_Q4QLF8,UniRef:UniRef50_P17443,UniRef:UniRef90_P45065;ec_number=2.4.1.227
contig_1	Pyrodigal	gene	1241296	1242723	.	+	.	ID=GCA000012185_01244_gene;locus_tag=GCA000012185_01244;gene=murC
contig_1	Pyrodigal	CDS	1241296	1242723	.	+	0	ID=GCA000012185_01244;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000012185_01244;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000012185_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_005690680.1,SO:0001217,UniParc:UPI000039A389,UniRef:UniRef100_Q4QLF7,UniRef:UniRef50_P17952,UniRef:UniRef90_P45066;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	1242792	1243712	.	+	.	ID=GCA000012185_01245_gene;locus_tag=GCA000012185_01245;gene=ddl
contig_1	Pyrodigal	CDS	1242792	1243712	.	+	0	ID=GCA000012185_01245;Name=D-alanine--D-alanine ligase;locus_tag=GCA000012185_01245;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddl;Parent=GCA000012185_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_005651831.1,SO:0001217,UniParc:UPI000039A388,UniRef:UniRef100_Q4QLF6,UniRef:UniRef50_P44405,UniRef:UniRef90_P44405;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	1243712	1244476	.	+	.	ID=GCA000012185_01246_gene;locus_tag=GCA000012185_01246;gene=ftsQ
contig_1	Pyrodigal	CDS	1243712	1244476	.	+	0	ID=GCA000012185_01246;Name=Cell division protein FtsQ;locus_tag=GCA000012185_01246;product=Cell division protein FtsQ;Dbxref=GO:0005886,GO:0032153,GO:0043093,GO:0090529;gene=ftsQ;Parent=GCA000012185_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_005651833.1,SO:0001217,UniParc:UPI000039A387,UniRef:UniRef100_A0A2R3GIM1,UniRef:UniRef50_P45067,UniRef:UniRef90_P45067
contig_1	Pyrodigal	gene	1244495	1245772	.	+	.	ID=GCA000012185_01247_gene;locus_tag=GCA000012185_01247;gene=ftsA
contig_1	Pyrodigal	CDS	1244495	1245772	.	+	0	ID=GCA000012185_01247;Name=cell division protein FtsA;locus_tag=GCA000012185_01247;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0009898,GO:0032153,GO:0043093,GO:0051301;gene=ftsA;Parent=GCA000012185_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_005667496.1,SO:0001217,UniParc:UPI000039A386,UniRef:UniRef100_A0A2R3GIH7,UniRef:UniRef50_P0ABH0,UniRef:UniRef90_P45068
contig_1	Pyrodigal	gene	1245856	1247121	.	+	.	ID=GCA000012185_01248_gene;locus_tag=GCA000012185_01248;gene=ftsZ
contig_1	Pyrodigal	CDS	1245856	1247121	.	+	0	ID=GCA000012185_01248;Name=cell division protein FtsZ;locus_tag=GCA000012185_01248;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258,GO:0051301;gene=ftsZ;Parent=GCA000012185_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,RefSeq:WP_011272399.1,SO:0001217,UniParc:UPI000053E1C3,UniRef:UniRef100_A0AAJ8WS05,UniRef:UniRef50_P45069,UniRef:UniRef90_P45069
contig_1	Pyrodigal	gene	1247160	1248077	.	+	.	ID=GCA000012185_01249_gene;locus_tag=GCA000012185_01249;gene=lpxC
contig_1	Pyrodigal	CDS	1247160	1248077	.	+	0	ID=GCA000012185_01249;Name=UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase;locus_tag=GCA000012185_01249;product=UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase;Dbxref=GO:0009245,GO:0016020,GO:0046872,GO:0103117;gene=lpxC;Parent=GCA000012185_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0774,COG:M,RefSeq:WP_011272400.1,SO:0001217,UniParc:UPI00003CDC26,UniRef:UniRef100_Q4QLF2,UniRef:UniRef50_Q6LMG1,UniRef:UniRef90_Q4QLF2,VFDB:VFC0258,VFDB:VFG013412;ec_number=3.5.1.108
contig_1	Pyrodigal	gene	1248204	1249361	.	+	.	ID=GCA000012185_01250_gene;locus_tag=GCA000012185_01250;gene=pheA
contig_1	Pyrodigal	CDS	1248204	1249361	.	+	0	ID=GCA000012185_01250;Name=Bifunctional chorismate mutase/prephenate dehydratase;locus_tag=GCA000012185_01250;product=Bifunctional chorismate mutase/prephenate dehydratase;Dbxref=GO:0004106,GO:0004664,GO:0005737,GO:0009094,GO:0046417;gene=pheA;Parent=GCA000012185_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1605,COG:E,RefSeq:WP_011272401.1,SO:0001217,UniParc:UPI000053E1C4,UniRef:UniRef100_A0AAJ8WD85,UniRef:UniRef50_P0A9J8,UniRef:UniRef90_P43900
contig_1	Pyrodigal	gene	1249406	1250263	.	-	.	ID=GCA000012185_01251_gene;locus_tag=GCA000012185_01251;gene=rapZ
contig_1	Pyrodigal	CDS	1249406	1250263	.	-	0	ID=GCA000012185_01251;Name=RNase adapter RapZ;locus_tag=GCA000012185_01251;product=RNase adapter RapZ;Dbxref=GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000012185_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_011272402.1,SO:0001217,UniParc:UPI00003CD88E,UniRef:UniRef100_Q4QLF0,UniRef:UniRef50_P45071,UniRef:UniRef90_P45071
contig_1	Pyrodigal	gene	1250281	1250775	.	-	.	ID=GCA000012185_01252_gene;locus_tag=GCA000012185_01252;gene=ptsN
contig_1	Pyrodigal	CDS	1250281	1250775	.	-	0	ID=GCA000012185_01252;Name=PTS IIA-like nitrogen regulatory protein PtsN;locus_tag=GCA000012185_01252;product=PTS IIA-like nitrogen regulatory protein PtsN;Dbxref=GO:0006355,GO:0008982,GO:0009401,GO:0030295;gene=ptsN;Parent=GCA000012185_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_011272403.1,SO:0001217,UniParc:UPI00003CD88D,UniRef:UniRef100_A0AAJ8WDS5,UniRef:UniRef50_P45072,UniRef:UniRef90_P45072
contig_1	Pyrodigal	gene	1250778	1251503	.	-	.	ID=GCA000012185_01253_gene;locus_tag=GCA000012185_01253;gene=lptB
contig_1	Pyrodigal	CDS	1250778	1251503	.	-	0	ID=GCA000012185_01253;Name=LPS export ABC transporter ATP-binding protein;locus_tag=GCA000012185_01253;product=LPS export ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0016887,GO:0043190,GO:0055085;gene=lptB;Parent=GCA000012185_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1137,COG:M,RefSeq:WP_011272404.1,SO:0001217,UniParc:UPI00003CD88C,UniRef:UniRef100_Q4QLE8,UniRef:UniRef50_P45073,UniRef:UniRef90_P45073;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	1251507	1252025	.	-	.	ID=GCA000012185_01254_gene;locus_tag=GCA000012185_01254;gene=lptA
contig_1	Pyrodigal	CDS	1251507	1252025	.	-	0	ID=GCA000012185_01254;Name=lipopolysaccharide transport periplasmic protein LptA;locus_tag=GCA000012185_01254;product=lipopolysaccharide transport periplasmic protein LptA;Dbxref=GO:0001530,GO:0009279,GO:0015920,GO:0017089,GO:0030288,GO:0042597,GO:0043165;gene=lptA;Parent=GCA000012185_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1934,COG:M,KEGG:K09774,RefSeq:WP_011272405.1,SO:0001217,UniParc:UPI00003CD88B,UniRef:UniRef100_A0AAJ8WD83,UniRef:UniRef50_P45074,UniRef:UniRef90_P45074
contig_1	Pyrodigal	gene	1252006	1252614	.	-	.	ID=GCA000012185_01255_gene;locus_tag=GCA000012185_01255;gene=lptC
contig_1	Pyrodigal	CDS	1252006	1252614	.	-	0	ID=GCA000012185_01255;Name=LPS export ABC transporter periplasmic protein LptC;locus_tag=GCA000012185_01255;product=LPS export ABC transporter periplasmic protein LptC;Dbxref=GO:0005886,GO:0015221,GO:0015920,GO:0017089,GO:0030288,GO:0043165;gene=lptC;Parent=GCA000012185_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3117,COG:M,RefSeq:WP_011272406.1,SO:0001217,UniParc:UPI00003CD88A,UniRef:UniRef100_A0AAJ8WDA2,UniRef:UniRef50_P45075,UniRef:UniRef90_P45075
contig_1	Pyrodigal	gene	1252664	1253200	.	-	.	ID=GCA000012185_01256_gene;locus_tag=GCA000012185_01256;gene=yjgA
contig_1	Pyrodigal	CDS	1252664	1253200	.	-	0	ID=GCA000012185_01256;Name=ribosome biogenesis factor YjgA;locus_tag=GCA000012185_01256;product=ribosome biogenesis factor YjgA;Dbxref=GO:0005829,GO:0019843,GO:0042254;gene=yjgA;Parent=GCA000012185_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3028,COG:J,KEGG:K09889,RefSeq:WP_011272407.1,SO:0001217,UniParc:UPI00003CD889,UniRef:UniRef100_Q4QLE5,UniRef:UniRef50_P45076,UniRef:UniRef90_P45076
contig_1	Pyrodigal	gene	1253289	1254644	.	+	.	ID=GCA000012185_01257_gene;locus_tag=GCA000012185_01257;gene=pmbA
contig_1	Pyrodigal	CDS	1253289	1254644	.	+	0	ID=GCA000012185_01257;Name=metalloprotease PmbA;locus_tag=GCA000012185_01257;product=metalloprotease PmbA;Dbxref=GO:0005829,GO:0006508,GO:0008237;gene=pmbA;Parent=GCA000012185_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,KEGG:K03592,RefSeq:WP_005686457.1,SO:0001217,UniParc:UPI000039A37D,UniRef:UniRef100_A0A2R3GII8,UniRef:UniRef50_P0AFK0,UniRef:UniRef90_P45077;ec_number=3.4.24.-
contig_1	Infernal	gene	1254689	1254804	.	+	.	ID=GCA000012185_01258_gene;locus_tag=GCA000012185_01258;gene=hrrF
contig_1	Infernal	ncRNA	1254689	1254804	4.4e-21	+	.	ID=GCA000012185_01258;Name=Haemophilus regulatory RNA responsive to iron;locus_tag=GCA000012185_01258;gene=hrrF;product=Haemophilus regulatory RNA responsive to iron;Dbxref=RFAM:RF02728;Parent=GCA000012185_01258_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02728
contig_1	Pyrodigal	gene	1255019	1255558	.	+	.	ID=GCA000012185_01259_gene;locus_tag=GCA000012185_01259;gene=hpt
contig_1	Pyrodigal	CDS	1255019	1255558	.	+	0	ID=GCA000012185_01259;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA000012185_01259;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0000166,GO:0000287,GO:0004422,GO:0005829,GO:0006166,GO:0006178,GO:0032263,GO:0032264,GO:0046100,GO:0052657;gene=hpt;Parent=GCA000012185_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0634,COG:F,KEGG:K00760,RefSeq:WP_011272408.1,SO:0001217,UniParc:UPI000053E1C5,UniRef:UniRef100_Q4QLE3,UniRef:UniRef50_P45078,UniRef:UniRef90_P45078;ec_number=2.4.2.8
contig_1	Pyrodigal	gene	1255864	1257186	.	+	.	ID=GCA000012185_01260_gene;locus_tag=GCA000012185_01260;gene=tcyP
contig_1	Pyrodigal	CDS	1255864	1257186	.	+	0	ID=GCA000012185_01260;Name=putative symporter HI_1154;locus_tag=GCA000012185_01260;product=putative symporter HI_1154;Dbxref=GO:0005886,GO:0015184,GO:0015293;gene=tcyP;Parent=GCA000012185_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1823,COG:E,RefSeq:WP_011272409.1,SO:0001217,UniParc:UPI000053E1C6,UniRef:UniRef100_Q4QLE2,UniRef:UniRef50_P45079,UniRef:UniRef90_P45079
contig_1	Pyrodigal	gene	1257286	1257753	.	-	.	ID=GCA000012185_01261_gene;locus_tag=GCA000012185_01261;gene=nrdG
contig_1	Pyrodigal	CDS	1257286	1257753	.	-	0	ID=GCA000012185_01261;Name=anaerobic ribonucleoside-triphosphate reductase-activating protein;locus_tag=GCA000012185_01261;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;Dbxref=GO:0005737,GO:0043365,GO:0046872,GO:0051539;gene=nrdG;Parent=GCA000012185_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,RefSeq:WP_011272410.1,SO:0001217,UniParc:UPI00003CD9CB,UniRef:UniRef100_A5UIS8,UniRef:UniRef50_P0A9N8,UniRef:UniRef90_P45080;ec_number=1.97.1.-
contig_1	Infernal	gene	1257882	1257980	.	+	.	ID=GCA000012185_01262_gene;locus_tag=GCA000012185_01262;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	1257882	1257980	3.8e-11	+	.	ID=GCA000012185_01262;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000012185_01262;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000012185_01262_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	Pyrodigal	gene	1258001	1259731	.	-	.	ID=GCA000012185_01263_gene;locus_tag=GCA000012185_01263;gene=cydC
contig_1	Pyrodigal	CDS	1258001	1259731	.	-	0	ID=GCA000012185_01263;Name=heme ABC transporter ATP-binding protein/permease CydC;locus_tag=GCA000012185_01263;product=heme ABC transporter ATP-binding protein/permease CydC;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0033228,GO:0034775,GO:0042626,GO:0045454,GO:0140359;gene=cydC;Parent=GCA000012185_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_011272411.1,SO:0001217,UniParc:UPI000053E1C7,UniRef:UniRef100_Q4QLE0,UniRef:UniRef50_P45081,UniRef:UniRef90_P45081;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1259731	1261491	.	-	.	ID=GCA000012185_01264_gene;locus_tag=GCA000012185_01264;gene=cydD
contig_1	Pyrodigal	CDS	1259731	1261491	.	-	0	ID=GCA000012185_01264;Name=heme ABC transporter permease/ATP-binding protein CydD;locus_tag=GCA000012185_01264;product=heme ABC transporter permease/ATP-binding protein CydD;Dbxref=GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0034040,GO:0042883,GO:0055085,GO:0140359;gene=cydD;Parent=GCA000012185_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_011272412.1,SO:0001217,UniParc:UPI000053E1C8,UniRef:UniRef100_A0A2S9S6T0,UniRef:UniRef50_P45082,UniRef:UniRef90_P45082;ec_number=7.4.2.-
contig_1	Pyrodigal	gene	1261563	1262519	.	-	.	ID=GCA000012185_01265_gene;locus_tag=GCA000012185_01265;gene=trxB
contig_1	Pyrodigal	CDS	1261563	1262519	.	-	0	ID=GCA000012185_01265;Name=thioredoxin-disulfide reductase;locus_tag=GCA000012185_01265;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0005737,GO:0019430,GO:0045454,GO:0071949;gene=trxB;Parent=GCA000012185_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K00384,RefSeq:WP_011272413.1,SO:0001217,UniParc:UPI000053E1C9,UniRef:UniRef100_A0A2S9S6T2,UniRef:UniRef50_P43788,UniRef:UniRef90_P43788;ec_number=1.8.1.9
contig_1	Pyrodigal	gene	1262593	1263450	.	-	.	ID=GCA000012185_01266_gene;locus_tag=GCA000012185_01266;gene=cnoX
contig_1	Pyrodigal	CDS	1262593	1263450	.	-	0	ID=GCA000012185_01266;Name=putative protein HI_1159;locus_tag=GCA000012185_01266;product=putative protein HI_1159;gene=cnoX;Parent=GCA000012185_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_011272414.1,SO:0001217,UniParc:UPI000053E1CA,UniRef:UniRef100_A0A2R3FYN2,UniRef:UniRef50_P43786,UniRef:UniRef90_P43786
contig_1	Pyrodigal	gene	1263529	1264500	.	-	.	ID=GCA000012185_01267_gene;locus_tag=GCA000012185_01267;gene=hemH
contig_1	Pyrodigal	CDS	1263529	1264500	.	-	0	ID=GCA000012185_01267;Name=ferrochelatase;locus_tag=GCA000012185_01267;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0006779,GO:0006783,GO:0046872;gene=hemH;Parent=GCA000012185_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_011272415.1,SO:0001217,UniParc:UPI00003CD863,UniRef:UniRef100_Q4QLD6,UniRef:UniRef50_P43868,UniRef:UniRef90_P43868;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	1264497	1264913	.	-	.	ID=GCA000012185_01268_gene;locus_tag=GCA000012185_01268;gene=paaI
contig_1	Pyrodigal	CDS	1264497	1264913	.	-	0	ID=GCA000012185_01268;Name=Putative esterase HI_1161;locus_tag=GCA000012185_01268;product=Putative esterase HI_1161;Dbxref=GO:0005829,GO:0061522;gene=paaI;Parent=GCA000012185_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_011272416.1,SO:0001217,UniParc:UPI00003CD862,UniRef:UniRef100_A0A2S9S6U6,UniRef:UniRef50_P45083,UniRef:UniRef90_P45083;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	1264927	1268010	.	-	.	ID=GCA000012185_01269_gene;locus_tag=GCA000012185_01269;gene=glcD
contig_1	Pyrodigal	CDS	1264927	1268010	.	-	0	ID=GCA000012185_01269;Name=D-2-hydroxyglutarate dehydrogenase;locus_tag=GCA000012185_01269;product=D-2-hydroxyglutarate dehydrogenase;Dbxref=GO:0004458,GO:0008720,GO:0046872,GO:0050660,GO:0051539,GO:0071949,GO:1903457;gene=glcD;Parent=GCA000012185_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0277,KEGG:K26063,RefSeq:WP_011272417.1,SO:0001217,UniParc:UPI000053E1CB,UniRef:UniRef100_Q4QLD4,UniRef:UniRef50_Q57252,UniRef:UniRef90_Q57252;ec_number=1.1.99.39
contig_1	Pyrodigal	gene	1268385	1269464	.	+	.	ID=GCA000012185_01270_gene;locus_tag=GCA000012185_01270;gene=ompA
contig_1	Pyrodigal	CDS	1268385	1269464	.	+	0	ID=GCA000012185_01270;Name=porin OmpA;locus_tag=GCA000012185_01270;product=porin OmpA;Dbxref=GO:0007155,GO:0009279,GO:0009289,GO:0015288,GO:0034220,GO:0046930;gene=ompA;Parent=GCA000012185_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_011272418.1,SO:0001217,UniParc:UPI000053E1CC,UniRef:UniRef100_Q4QLD3,UniRef:UniRef50_P45996,UniRef:UniRef90_P45996
contig_1	Pyrodigal	gene	1269615	1269938	.	+	.	ID=GCA000012185_01271_gene;locus_tag=GCA000012185_01271;gene=grxD
contig_1	Pyrodigal	CDS	1269615	1269938	.	+	0	ID=GCA000012185_01271;Name=Grx4 family monothiol glutaredoxin;locus_tag=GCA000012185_01271;product=Grx4 family monothiol glutaredoxin;Dbxref=GO:0005737,GO:0009055,GO:0015036,GO:0046872,GO:0051537;gene=grxD;Parent=GCA000012185_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0278,COG:O,RefSeq:WP_005653629.1,SO:0001217,UniParc:UPI00003CDBB3,UniRef:UniRef100_Q4QLD2,UniRef:UniRef50_P45085,UniRef:UniRef90_P45085
contig_1	Pyrodigal	gene	1270015	1271115	.	-	.	ID=GCA000012185_01272_gene;locus_tag=GCA000012185_01272;gene=hisC
contig_1	Pyrodigal	CDS	1270015	1271115	.	-	0	ID=GCA000012185_01272;Name=histidinol-phosphate transaminase;locus_tag=GCA000012185_01272;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000012185_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_011272420.1,SO:0001217,UniParc:UPI000053E1CE,UniRef:UniRef100_Q4QLD1,UniRef:UniRef50_Q65S79,UniRef:UniRef90_Q57004;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	1271203	1272291	.	-	.	ID=GCA000012185_01273_gene;locus_tag=GCA000012185_01273;gene=serC
contig_1	Pyrodigal	CDS	1271203	1272291	.	-	0	ID=GCA000012185_01273;Name=3-phosphoserine/phosphohydroxythreonine transaminase;locus_tag=GCA000012185_01273;product=3-phosphoserine/phosphohydroxythreonine transaminase;Dbxref=GO:0003824,GO:0004648,GO:0005737,GO:0006564,GO:0008615,GO:0030170;gene=serC;Parent=GCA000012185_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1932,COG:HE,KEGG:K00831,RefSeq:WP_011272421.1,SO:0001217,UniParc:UPI000053E1CF,UniRef:UniRef100_A0A2S9RVB4,UniRef:UniRef50_P23721,UniRef:UniRef90_P44336;ec_number=2.6.1.52
contig_1	Pyrodigal	gene	1272482	1272826	.	+	.	ID=GCA000012185_01274_gene;locus_tag=GCA000012185_01274;gene=yeeX
contig_1	Pyrodigal	CDS	1272482	1272826	.	+	0	ID=GCA000012185_01274;Name=DUF496 domain-containing protein;locus_tag=GCA000012185_01274;product=DUF496 domain-containing protein;Dbxref=GO:0005829;gene=yeeX;Parent=GCA000012185_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2926,COG:S,KEGG:K09802,RefSeq:WP_005647511.1,SO:0001217,UniParc:UPI00003CDBCF,UniRef:UniRef100_Q4QLC9,UniRef:UniRef50_P44117,UniRef:UniRef90_P44117
contig_1	Pyrodigal	gene	1272866	1273432	.	-	.	ID=GCA000012185_01275_gene;locus_tag=GCA000012185_01275;gene=ilvE
contig_1	Pyrodigal	CDS	1272866	1273432	.	-	0	ID=GCA000012185_01275;Name=putative protein HI_1169;locus_tag=GCA000012185_01275;product=putative protein HI_1169;Dbxref=GO:0003824;gene=ilvE;Parent=GCA000012185_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_011272422.1,SO:0001217,UniParc:UPI000053E1D0,UniRef:UniRef100_A0A2S9S6S5,UniRef:UniRef50_P44118,UniRef:UniRef90_P44118
contig_1	Pyrodigal	gene	1273432	1274418	.	-	.	ID=GCA000012185_01276_gene;locus_tag=GCA000012185_01276;gene=trpE
contig_1	Pyrodigal	CDS	1273432	1274418	.	-	0	ID=GCA000012185_01276;Name=aminodeoxychorismate synthase component I;locus_tag=GCA000012185_01276;product=aminodeoxychorismate synthase component I;Dbxref=GO:0000162,GO:0009058,GO:0046820;gene=trpE;Parent=GCA000012185_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_011272423.1,SO:0001217,UniParc:UPI000053E1D1,UniRef:UniRef100_Q4QLC7,UniRef:UniRef50_Q57527,UniRef:UniRef90_Q57527;ec_number=2.6.1.85
contig_1	Pyrodigal	gene	1274460	1275041	.	+	.	ID=GCA000012185_01277_gene;locus_tag=GCA000012185_01277;gene=pabA
contig_1	Pyrodigal	CDS	1274460	1275041	.	+	0	ID=GCA000012185_01277;Name=anthranilate synthase component II;locus_tag=GCA000012185_01277;product=anthranilate synthase component II;Dbxref=GO:0000162,GO:0004049,GO:0046654,GO:0046820;gene=pabA;Parent=GCA000012185_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_011272424.1,SO:0001217,UniParc:UPI00003CDB5A,UniRef:UniRef100_A0A2S9S6T8,UniRef:UniRef50_P44339,UniRef:UniRef90_P44339;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1275126	1276280	.	+	.	ID=GCA000012185_01278_gene;locus_tag=GCA000012185_01278;gene=metK
contig_1	Pyrodigal	CDS	1275126	1276280	.	+	0	ID=GCA000012185_01278;Name=methionine adenosyltransferase;locus_tag=GCA000012185_01278;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000012185_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_005660404.1,SO:0001217,UniParc:UPI000053E1D2,UniRef:UniRef100_Q4QLC5,UniRef:UniRef50_P0A817,UniRef:UniRef90_P57897;ec_number=2.5.1.6
contig_1	Pyrodigal	gene	1276614	1277090	.	+	.	ID=GCA000012185_01279_gene;locus_tag=GCA000012185_01279;gene=sprT
contig_1	Pyrodigal	CDS	1276614	1277090	.	+	0	ID=GCA000012185_01279;Name=SprT family zinc-dependent metalloprotease;locus_tag=GCA000012185_01279;product=SprT family zinc-dependent metalloprotease;gene=sprT;Parent=GCA000012185_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,SO:0001217,UniParc:UPI000039AB3B,UniRef:UniRef100_A0A3E1QIV2,UniRef:UniRef50_Q7VMU2,UniRef:UniRef90_A0A3E1QIV2
contig_1	Pyrodigal	gene	1277141	1277653	.	+	.	ID=GCA000012185_01280_gene;locus_tag=GCA000012185_01280;gene=lomR
contig_1	Pyrodigal	CDS	1277141	1277653	.	+	0	ID=GCA000012185_01280;Name=Porin opacity type domain-containing protein;locus_tag=GCA000012185_01280;product=Porin opacity type domain-containing protein;gene=lomR;Parent=GCA000012185_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3637,COG:M,RefSeq:WP_011272425.1,SO:0001217,UniParc:UPI000053E1D3,UniRef:UniRef100_Q4QLC3,UniRef:UniRef50_A0A0D0IL38,UniRef:UniRef90_A0A0D0IL38
contig_1	Pyrodigal	gene	1277689	1278108	.	-	.	ID=GCA000012185_01281_gene;locus_tag=GCA000012185_01281;gene=yadA
contig_1	Pyrodigal	CDS	1277689	1278108	.	-	0	ID=GCA000012185_01281;Name=YadA C-terminal domain-containing protein;locus_tag=GCA000012185_01281;product=YadA C-terminal domain-containing protein;gene=yadA;Parent=GCA000012185_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_224056787.1,SO:0001217,UniParc:UPI00003CD9A1,UniRef:UniRef100_A0AAJ8WD50,UniRef:UniRef50_A5UIU3,UniRef:UniRef90_A0AAJ8WD50
contig_1	Pyrodigal	gene	1278201	1278884	.	-	.	ID=GCA000012185_01282_gene;locus_tag=GCA000012185_01282;gene=artM
contig_1	Pyrodigal	CDS	1278201	1278884	.	-	0	ID=GCA000012185_01282;Name=arginine ABC transporter permease ArtM;locus_tag=GCA000012185_01282;product=arginine ABC transporter permease ArtM;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0022857,GO:0043190,GO:0071705;gene=artM;Parent=GCA000012185_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09998,RefSeq:WP_011272427.1,SO:0001217,UniParc:UPI00003CD9A2,UniRef:UniRef100_A0A1Q5Y5E7,UniRef:UniRef50_P0AE30,UniRef:UniRef90_P45089;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	1278884	1279549	.	-	.	ID=GCA000012185_01283_gene;locus_tag=GCA000012185_01283;gene=artQ
contig_1	Pyrodigal	CDS	1278884	1279549	.	-	0	ID=GCA000012185_01283;Name=arginine ABC transporter permease ArtQ;locus_tag=GCA000012185_01283;product=arginine ABC transporter permease ArtQ;Dbxref=GO:0005886,GO:0006865,GO:0016020,GO:0022857,GO:0043190,GO:0055085,GO:0071705;gene=artQ;Parent=GCA000012185_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4215,COG:E,KEGG:K09999,RefSeq:WP_011272428.1,SO:0001217,UniParc:UPI00003CD9A3,UniRef:UniRef100_Q4QLC0,UniRef:UniRef50_P45090,UniRef:UniRef90_P45090;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	1279553	1280272	.	-	.	ID=GCA000012185_01284_gene;locus_tag=GCA000012185_01284;gene=artI
contig_1	Pyrodigal	CDS	1279553	1280272	.	-	0	ID=GCA000012185_01284;Name=ABC transporter arginine-binding protein;locus_tag=GCA000012185_01284;product=ABC transporter arginine-binding protein;Dbxref=GO:0006865,GO:0030288;gene=artI;Parent=GCA000012185_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_011272429.1,SO:0001217,UniParc:UPI000053E1D4,UniRef:UniRef100_A0AAJ8WDQ4,UniRef:UniRef50_P45091,UniRef:UniRef90_P45091
contig_1	Pyrodigal	gene	1280290	1281021	.	-	.	ID=GCA000012185_01285_gene;locus_tag=GCA000012185_01285;gene=artP
contig_1	Pyrodigal	CDS	1280290	1281021	.	-	0	ID=GCA000012185_01285;Name=arginine ABC transporter ATP-binding protein ArtP;locus_tag=GCA000012185_01285;product=arginine ABC transporter ATP-binding protein ArtP;Dbxref=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gene=artP;Parent=GCA000012185_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4161,COG:E,RefSeq:WP_005657167.1,SO:0001217,UniParc:UPI000039AB40,UniRef:UniRef100_A0A0H3PCR2,UniRef:UniRef50_P0AAF6,UniRef:UniRef90_A0A0M3G7B1;ec_number=7.4.2.1
contig_1	Pyrodigal	gene	1281147	1281731	.	-	.	ID=GCA000012185_01286_gene;locus_tag=GCA000012185_01286;gene=gmhA
contig_1	Pyrodigal	CDS	1281147	1281731	.	-	0	ID=GCA000012185_01286;Name=phosphoheptose isomerase;locus_tag=GCA000012185_01286;product=phosphoheptose isomerase;Dbxref=GO:0005737,GO:0008270,GO:0008968,GO:0009244,GO:0097367,GO:1901135,GO:2001061;gene=gmhA;Parent=GCA000012185_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0279,COG:G,KEGG:K03271,RefSeq:WP_011272430.1,SO:0001217,UniParc:UPI000053E1D5,UniRef:UniRef100_Q4QLB7,UniRef:UniRef50_P63224,UniRef:UniRef90_P45093,VFDB:VFC0258,VFDB:VFG013418;ec_number=5.3.1.28
contig_1	Pyrodigal	gene	1281831	1282745	.	+	.	ID=GCA000012185_01287_gene;locus_tag=GCA000012185_01287;gene=ligA
contig_1	Pyrodigal	CDS	1281831	1282745	.	+	0	ID=GCA000012185_01287;Name=DNA ligase;locus_tag=GCA000012185_01287;product=DNA ligase;Dbxref=GO:0003910,GO:0005524,GO:0006260,GO:0006281,GO:0006310,GO:0046872;gene=ligA;Parent=GCA000012185_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1793,COG:L,KEGG:K26441,SO:0001217,UniParc:UPI000053E1D6,UniRef:UniRef100_A0AAJ8WD90,UniRef:UniRef50_P44121,UniRef:UniRef90_P44121;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	1282774	1283757	.	-	.	ID=GCA000012185_01288_gene;locus_tag=GCA000012185_01288;gene=dppF
contig_1	Pyrodigal	CDS	1282774	1283757	.	-	0	ID=GCA000012185_01288;Name=Dipeptide transport ATP-binding protein DppF;locus_tag=GCA000012185_01288;product=Dipeptide transport ATP-binding protein DppF;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887,GO:0055085;gene=dppF;Parent=GCA000012185_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4608,COG:E,RefSeq:WP_005663823.1,SO:0001217,UniParc:UPI00003CD776,UniRef:UniRef100_A5UIV0,UniRef:UniRef50_P37313,UniRef:UniRef90_P45094;ec_number=7.4.2.9
contig_1	Pyrodigal	gene	1283760	1284752	.	-	.	ID=GCA000012185_01289_gene;locus_tag=GCA000012185_01289;gene=dppD
contig_1	Pyrodigal	CDS	1283760	1284752	.	-	0	ID=GCA000012185_01289;Name=dipeptide ABC transporter ATP-binding protein;locus_tag=GCA000012185_01289;product=dipeptide ABC transporter ATP-binding protein;Dbxref=GO:0000166,GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=dppD;Parent=GCA000012185_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_005647479.1,SO:0001217,UniParc:UPI000039AB44,UniRef:UniRef100_A0AAE8CZS0,UniRef:UniRef50_P0AAG0,UniRef:UniRef90_P45095;ec_number=7.4.2.9
contig_1	Pyrodigal	gene	1284762	1285649	.	-	.	ID=GCA000012185_01290_gene;locus_tag=GCA000012185_01290;gene=dppC
contig_1	Pyrodigal	CDS	1284762	1285649	.	-	0	ID=GCA000012185_01290;Name=Dipeptide transport system permease protein DppC;locus_tag=GCA000012185_01290;product=Dipeptide transport system permease protein DppC;Dbxref=GO:0005886,GO:0015031,GO:0071916;gene=dppC;Parent=GCA000012185_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,KEGG:K12370,RefSeq:WP_005653671.1,SO:0001217,UniParc:UPI000012984B,UniRef:UniRef100_P51000,UniRef:UniRef50_A0A0H2ZFV0,UniRef:UniRef90_P51000
contig_1	Pyrodigal	gene	1285664	1286665	.	-	.	ID=GCA000012185_01291_gene;locus_tag=GCA000012185_01291;gene=dppB
contig_1	Pyrodigal	CDS	1285664	1286665	.	-	0	ID=GCA000012185_01291;Name=Dipeptide transport system permease protein DppB;locus_tag=GCA000012185_01291;product=Dipeptide transport system permease protein DppB;Dbxref=GO:0005886,GO:0015031,GO:0071916;gene=dppB;Parent=GCA000012185_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,KEGG:K12369,RefSeq:WP_005647473.1,SO:0001217,UniParc:UPI000039AB46,UniRef:UniRef100_A0A1Q5Y5F8,UniRef:UniRef50_P45096,UniRef:UniRef90_P45096
contig_1	Pyrodigal	gene	1286755	1288938	.	-	.	ID=GCA000012185_01292_gene;locus_tag=GCA000012185_01292;gene=uvrD
contig_1	Pyrodigal	CDS	1286755	1288938	.	-	0	ID=GCA000012185_01292;Name=DNA helicase II;locus_tag=GCA000012185_01292;product=DNA helicase II;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005737,GO:0005829,GO:0006268,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0042802,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=uvrD;Parent=GCA000012185_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,SO:0001217,UniParc:UPI000053E1D7,UniRef:UniRef100_Q4QLB1,UniRef:UniRef50_Q02322,UniRef:UniRef90_Q02322;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1289545	1290174	.	-	.	ID=GCA000012185_01293_gene;locus_tag=GCA000012185_01293;gene=queE
contig_1	Pyrodigal	CDS	1289545	1290174	.	-	0	ID=GCA000012185_01293;Name=7-carboxy-7-deazaguanine synthase;locus_tag=GCA000012185_01293;product=7-carboxy-7-deazaguanine synthase;Dbxref=GO:0000287,GO:0008616,GO:0016840,GO:0051539,GO:1904047;gene=queE;Parent=GCA000012185_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_005657151.1,SO:0001217,UniParc:UPI00014F77AC,UniRef:UniRef100_P45097,UniRef:UniRef50_P45097,UniRef:UniRef90_P45097;ec_number=4.3.99.3
contig_1	Pyrodigal	gene	1290181	1290606	.	-	.	ID=GCA000012185_01294_gene;locus_tag=GCA000012185_01294;gene=queD
contig_1	Pyrodigal	CDS	1290181	1290606	.	-	0	ID=GCA000012185_01294;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA000012185_01294;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008616,GO:0046872,GO:0070497;gene=queD;Parent=GCA000012185_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,RefSeq:WP_011272433.1,SO:0001217,UniParc:UPI00003CD778,UniRef:UniRef100_A0A2S9RCC6,UniRef:UniRef50_P44123,UniRef:UniRef90_P44123;ec_number=4.1.2.50
contig_1	Pyrodigal	gene	1290599	1291282	.	-	.	ID=GCA000012185_01295_gene;locus_tag=GCA000012185_01295;gene=queC
contig_1	Pyrodigal	CDS	1290599	1291282	.	-	0	ID=GCA000012185_01295;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA000012185_01295;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0005524,GO:0008270,GO:0008616,GO:0016879;gene=queC;Parent=GCA000012185_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,KEGG:K06920,RefSeq:WP_011272434.1,SO:0001217,UniParc:UPI00003CD779,UniRef:UniRef100_Q4QLA8,UniRef:UniRef50_P44124,UniRef:UniRef90_P44124;ec_number=6.3.4.20
contig_1	Infernal	regulatory_region	1291284	1291328	3.9e-06	-	.	ID=JPLKGDNPJF_112;Name=PreQ1 (pre queuosine) riboswitch aptamer;product=PreQ1 (pre queuosine) riboswitch aptamer;Dbxref=RFAM:RF00522;inference=profile:Rfam:RF00522;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1291438	1291581	.	+	.	ID=GCA000012185_01296_gene;locus_tag=GCA000012185_01296
contig_1	Pyrodigal	CDS	1291438	1291581	.	+	0	ID=GCA000012185_01296;Name=putative protein HI_1192;locus_tag=GCA000012185_01296;product=putative protein HI_1192;Parent=GCA000012185_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005634891.1,SO:0001217,UniParc:UPI000013A28A,UniRef:UniRef100_P44125,UniRef:UniRef50_P44125,UniRef:UniRef90_P44125
contig_1	Pyrodigal	gene	1291632	1292663	.	-	.	ID=GCA000012185_01297_gene;locus_tag=GCA000012185_01297;gene=ilvE
contig_1	Pyrodigal	CDS	1291632	1292663	.	-	0	ID=GCA000012185_01297;Name=branched-chain amino acid aminotransferase;locus_tag=GCA000012185_01297;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081,GO:0009097,GO:0009098,GO:0009099,GO:0052655,GO:0052656;gene=ilvE;Parent=GCA000012185_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_011272435.1,SO:0001217,UniParc:UPI000053E1D8,UniRef:UniRef100_A0A2R3FXP3,UniRef:UniRef50_O26004,UniRef:UniRef90_P54689;ec_number=2.6.1.42
contig_1	Infernal	gene	1292838	1293028	.	-	.	ID=GCA000012185_01298_gene;locus_tag=GCA000012185_01298;gene=gcvB
contig_1	Infernal	ncRNA	1292838	1293028	3.3e-16	-	.	ID=GCA000012185_01298;Name=GcvB RNA;locus_tag=GCA000012185_01298;gene=gcvB;product=GcvB RNA;Dbxref=RFAM:RF00022;Parent=GCA000012185_01298_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00022
contig_1	Pyrodigal	gene	1293138	1294031	.	+	.	ID=GCA000012185_01299_gene;locus_tag=GCA000012185_01299;gene=gcvA
contig_1	Pyrodigal	CDS	1293138	1294031	.	+	0	ID=GCA000012185_01299;Name=Glycine cleavage system transcriptional activator-like protein;locus_tag=GCA000012185_01299;product=Glycine cleavage system transcriptional activator-like protein;Dbxref=GO:0003700,GO:0005737,GO:0006351,GO:0043565;gene=gcvA;Parent=GCA000012185_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K03566,RefSeq:WP_005667412.1,SO:0001217,UniParc:UPI000039AB4B,UniRef:UniRef100_A0AAJ8WDF6,UniRef:UniRef50_P45099,UniRef:UniRef90_P45099
contig_1	Pyrodigal	gene	1294024	1295115	.	+	.	ID=GCA000012185_01300_gene;locus_tag=GCA000012185_01300;gene=rlmM
contig_1	Pyrodigal	CDS	1294024	1295115	.	+	0	ID=GCA000012185_01300;Name=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;locus_tag=GCA000012185_01300;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0008757,GO:0032259;gene=rlmM;Parent=GCA000012185_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2933,COG:J,KEGG:K06968,RefSeq:WP_011272436.1,SO:0001217,UniParc:UPI000053E1D9,UniRef:UniRef100_Q4QLA4,UniRef:UniRef50_P0ADR6,UniRef:UniRef90_P45100;ec_number=2.1.1.186
contig_1	Pyrodigal	gene	1295151	1296320	.	+	.	ID=GCA000012185_01301_gene;locus_tag=GCA000012185_01301;gene=sucC
contig_1	Pyrodigal	CDS	1295151	1296320	.	+	0	ID=GCA000012185_01301;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000012185_01301;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000012185_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_011272437.1,SO:0001217,UniParc:UPI000053E1DA,UniRef:UniRef100_Q4QLA3,UniRef:UniRef50_P45101,UniRef:UniRef90_P45101;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1296320	1297201	.	+	.	ID=GCA000012185_01302_gene;locus_tag=GCA000012185_01302;gene=sucD
contig_1	Pyrodigal	CDS	1296320	1297201	.	+	0	ID=GCA000012185_01302;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000012185_01302;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0006099,GO:0009361;gene=sucD;Parent=GCA000012185_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_011272438.1,SO:0001217,UniParc:UPI00003CDB65,UniRef:UniRef100_A0A2R3G429,UniRef:UniRef50_Q51567,UniRef:UniRef90_P45102;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1297322	1297945	.	+	.	ID=GCA000012185_01303_gene;locus_tag=GCA000012185_01303;gene=tsaC
contig_1	Pyrodigal	CDS	1297322	1297945	.	+	0	ID=GCA000012185_01303;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000012185_01303;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000012185_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_005689272.1,SO:0001217,UniParc:UPI000053E1DB,UniRef:UniRef100_A0A2S9S6Q3,UniRef:UniRef50_P45103,UniRef:UniRef90_P45103;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	1297993	1299066	.	+	.	ID=GCA000012185_01304_gene;locus_tag=GCA000012185_01304;gene=rluB
contig_1	Pyrodigal	CDS	1297993	1299066	.	+	0	ID=GCA000012185_01304;Name=23S rRNA pseudouridine(2605) synthase RluB;locus_tag=GCA000012185_01304;product=23S rRNA pseudouridine(2605) synthase RluB;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0009982,GO:0160139;gene=rluB;Parent=GCA000012185_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,KEGG:K06178,RefSeq:WP_011272439.1,SO:0001217,UniParc:UPI000053E1DC,UniRef:UniRef100_A0A2R3FYC7,UniRef:UniRef50_P45104,UniRef:UniRef90_P45104;ec_number=5.4.99.22
contig_1	Pyrodigal	gene	1299077	1300048	.	+	.	ID=GCA000012185_01305_gene;locus_tag=GCA000012185_01305;gene=cysB
contig_1	Pyrodigal	CDS	1299077	1300048	.	+	0	ID=GCA000012185_01305;Name=HTH-type transcriptional regulator CysB;locus_tag=GCA000012185_01305;product=HTH-type transcriptional regulator CysB;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0019344;gene=cysB;Parent=GCA000012185_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005689269.1,SO:0001217,UniParc:UPI00003CD845,UniRef:UniRef100_A0A2S9S6P1,UniRef:UniRef50_P0A9F3,UniRef:UniRef90_P45105
contig_1	Pyrodigal	gene	1300107	1301051	.	-	.	ID=GCA000012185_01306_gene;locus_tag=GCA000012185_01306;gene=prmB
contig_1	Pyrodigal	CDS	1300107	1301051	.	-	0	ID=GCA000012185_01306;Name=50S ribosomal protein L3 N(5)-glutamine methyltransferase;locus_tag=GCA000012185_01306;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0005829,GO:0008276,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0042273;gene=prmB;Parent=GCA000012185_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K07320,RefSeq:WP_011272440.1,SO:0001217,UniParc:UPI00003CD844,UniRef:UniRef100_A0A2S9S6P2,UniRef:UniRef50_P45106,UniRef:UniRef90_P45106;ec_number=2.1.1.298
contig_1	Pyrodigal	gene	1301182	1301685	.	+	.	ID=GCA000012185_01307_gene;locus_tag=GCA000012185_01307;gene=smrB
contig_1	Pyrodigal	CDS	1301182	1301685	.	+	0	ID=GCA000012185_01307;Name=endonuclease SmrB;locus_tag=GCA000012185_01307;product=endonuclease SmrB;Dbxref=GO:0004519,GO:0019843;gene=smrB;Parent=GCA000012185_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2840,COG:JL,RefSeq:WP_005689264.1,SO:0001217,UniParc:UPI00003CD843,UniRef:UniRef100_A0A2S9S6P8,UniRef:UniRef50_P44126,UniRef:UniRef90_P44126;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1301763	1303898	.	-	.	ID=GCA000012185_01308_gene;locus_tag=GCA000012185_01308;gene=pta
contig_1	Pyrodigal	CDS	1301763	1303898	.	-	0	ID=GCA000012185_01308;Name=phosphate acetyltransferase;locus_tag=GCA000012185_01308;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006085,GO:0008959,GO:0016407;gene=pta;Parent=GCA000012185_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0857,COG:R,KEGG:K13788,RefSeq:WP_005686526.1,SO:0001217,UniParc:UPI000053E1DD,UniRef:UniRef100_A0AAJ8WSE0,UniRef:UniRef50_P0A9M8,UniRef:UniRef90_P45107;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	1303966	1305171	.	-	.	ID=GCA000012185_01309_gene;locus_tag=GCA000012185_01309;gene=ackA
contig_1	Pyrodigal	CDS	1303966	1305171	.	-	0	ID=GCA000012185_01309;Name=Acetate kinase;locus_tag=GCA000012185_01309;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA000012185_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_011272441.1,SO:0001217,UniParc:UPI00003CD840,UniRef:UniRef100_Q4QL95,UniRef:UniRef50_P63411,UniRef:UniRef90_P44406;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	1305388	1305831	.	+	.	ID=GCA000012185_01310_gene;locus_tag=GCA000012185_01310;gene=yfbV
contig_1	Pyrodigal	CDS	1305388	1305831	.	+	0	ID=GCA000012185_01310;Name=terminus macrodomain insulation protein YfbV;locus_tag=GCA000012185_01310;product=terminus macrodomain insulation protein YfbV;Dbxref=GO:0005886;gene=yfbV;Parent=GCA000012185_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3092,COG:S,KEGG:K09899,RefSeq:WP_005657119.1,SO:0001217,UniParc:UPI00003CD83F,UniRef:UniRef100_Q4QL94,UniRef:UniRef50_P44127,UniRef:UniRef90_P44127
contig_1	Pyrodigal	gene	1305918	1306409	.	+	.	ID=GCA000012185_01311_gene;locus_tag=GCA000012185_01311;gene=cvpA
contig_1	Pyrodigal	CDS	1305918	1306409	.	+	0	ID=GCA000012185_01311;Name=Colicin V production -like protein;locus_tag=GCA000012185_01311;product=Colicin V production -like protein;Dbxref=GO:0005886,GO:0009403;gene=cvpA;Parent=GCA000012185_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_005657117.1,SO:0001217,UniParc:UPI000053E1DE,UniRef:UniRef100_A0A0H3PLZ0,UniRef:UniRef50_P45108,UniRef:UniRef90_P45108
contig_1	Pyrodigal	gene	1306420	1307937	.	+	.	ID=GCA000012185_01312_gene;locus_tag=GCA000012185_01312;gene=purF
contig_1	Pyrodigal	CDS	1306420	1307937	.	+	0	ID=GCA000012185_01312;Name=amidophosphoribosyltransferase;locus_tag=GCA000012185_01312;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0005737,GO:0006164,GO:0006189,GO:0009113;gene=purF;Parent=GCA000012185_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_011272442.1,SO:0001217,UniParc:UPI000053E1DF,UniRef:UniRef100_A0A2S9S6P9,UniRef:UniRef50_P43854,UniRef:UniRef90_P43854;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	1308002	1308892	.	-	.	ID=GCA000012185_01313_gene;locus_tag=GCA000012185_01313;gene=yfcH
contig_1	Pyrodigal	CDS	1308002	1308892	.	-	0	ID=GCA000012185_01313;Name=Epimerase family protein HI_1208;locus_tag=GCA000012185_01313;product=Epimerase family protein HI_1208;gene=yfcH;Parent=GCA000012185_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,RefSeq:WP_005657112.1,SO:0001217,UniParc:UPI000053E1E0,UniRef:UniRef100_A0A0H3PHA4,UniRef:UniRef50_P71373,UniRef:UniRef90_P71373
contig_1	Pyrodigal	gene	1308892	1309347	.	-	.	ID=GCA000012185_01314_gene;locus_tag=GCA000012185_01314;gene=argR
contig_1	Pyrodigal	CDS	1308892	1309347	.	-	0	ID=GCA000012185_01314;Name=transcriptional regulator ArgR;locus_tag=GCA000012185_01314;product=transcriptional regulator ArgR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=argR;Parent=GCA000012185_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_005657110.1,SO:0001217,UniParc:UPI000053E1E1,UniRef:UniRef100_Q4QL90,UniRef:UniRef50_P45110,UniRef:UniRef90_P45110
contig_1	Pyrodigal	gene	1309554	1310489	.	+	.	ID=GCA000012185_01315_gene;locus_tag=GCA000012185_01315;gene=mdh
contig_1	Pyrodigal	CDS	1309554	1310489	.	+	0	ID=GCA000012185_01315;Name=malate dehydrogenase;locus_tag=GCA000012185_01315;product=malate dehydrogenase;Dbxref=GO:0005737,GO:0006099,GO:0006108,GO:0030060;gene=mdh;Parent=GCA000012185_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_005657108.1,SO:0001217,UniParc:UPI000053E1E2,UniRef:UniRef100_Q4QL89,UniRef:UniRef50_P61889,UniRef:UniRef90_P44427;ec_number=1.1.1.37
contig_1	Pyrodigal	gene	1310576	1312084	.	-	.	ID=GCA000012185_01316_gene;locus_tag=GCA000012185_01316;gene=lysS
contig_1	Pyrodigal	CDS	1310576	1312084	.	-	0	ID=GCA000012185_01316;Name=lysine--tRNA ligase;locus_tag=GCA000012185_01316;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430;gene=lysS;Parent=GCA000012185_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_011272443.1,SO:0001217,UniParc:UPI000053E1E3,UniRef:UniRef100_Q4QL88,UniRef:UniRef50_P0A8N5,UniRef:UniRef90_P43825;ec_number=6.1.1.6
contig_1	Pyrodigal	gene	1312196	1313047	.	-	.	ID=GCA000012185_01317_gene;locus_tag=GCA000012185_01317;gene=prfB
contig_1	Pyrodigal	CDS	1312196	1313047	.	-	0	ID=GCA000012185_01317;Name=peptide chain release factor 2;locus_tag=GCA000012185_01317;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfB;Parent=GCA000012185_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000039AB5A,UniRef:UniRef100_A0A158SW96,UniRef:UniRef50_P57511,UniRef:UniRef90_A0A336N602
contig_1	Pyrodigal	gene	1313427	1314116	.	+	.	ID=GCA000012185_01318_gene;locus_tag=GCA000012185_01318;gene=dsbC
contig_1	Pyrodigal	CDS	1313427	1314116	.	+	0	ID=GCA000012185_01318;Name=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;locus_tag=GCA000012185_01318;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;Dbxref=GO:0042597;gene=dsbC;Parent=GCA000012185_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_011272444.1,SO:0001217,UniParc:UPI000053E1E4,UniRef:UniRef100_Q4QL86,UniRef:UniRef50_P45111,UniRef:UniRef90_P45111;ec_number=5.3.4.1
contig_1	Pyrodigal	gene	1314404	1316131	.	+	.	ID=GCA000012185_01319_gene;locus_tag=GCA000012185_01319;gene=recJ
contig_1	Pyrodigal	CDS	1314404	1316131	.	+	0	ID=GCA000012185_01319;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA000012185_01319;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0003676,GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA000012185_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0608,COG:L,KEGG:K07462,RefSeq:WP_011272445.1,SO:0001217,UniParc:UPI000053E1E5,UniRef:UniRef100_Q4QL85,UniRef:UniRef50_P45112,UniRef:UniRef90_P45112;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1316124	1316831	.	+	.	ID=GCA000012185_01320_gene;locus_tag=GCA000012185_01320
contig_1	Pyrodigal	CDS	1316124	1316831	.	+	0	ID=GCA000012185_01320;Name=putative protein HI_1215;locus_tag=GCA000012185_01320;product=putative protein HI_1215;Parent=GCA000012185_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03673,RefSeq:WP_011272446.1,SO:0001217,UniParc:UPI000053E1E6,UniRef:UniRef100_Q4QL84,UniRef:UniRef50_P44128,UniRef:UniRef90_P44128;ec_number=1.8.4.15
contig_1	Pyrodigal	gene	1316828	1317520	.	+	.	ID=GCA000012185_01321_gene;locus_tag=GCA000012185_01321;gene=mtnN
contig_1	Pyrodigal	CDS	1316828	1317520	.	+	0	ID=GCA000012185_01321;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA000012185_01321;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019284,GO:0019509;gene=mtnN;Parent=GCA000012185_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,RefSeq:WP_011272447.1,SO:0001217,UniParc:UPI00003CD920,UniRef:UniRef100_Q4QL83,UniRef:UniRef50_P45113,UniRef:UniRef90_P45113;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	1317594	1320341	.	-	.	ID=GCA000012185_01322_gene;locus_tag=GCA000012185_01322
contig_1	Pyrodigal	CDS	1317594	1320341	.	-	0	ID=GCA000012185_01322;Name=Heme utilization protein;locus_tag=GCA000012185_01322;product=Heme utilization protein;Parent=GCA000012185_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16087,RefSeq:WP_011272448.1,SO:0001217,UniParc:UPI000053E1E7,UniRef:UniRef100_Q4QL82,UniRef:UniRef50_P45114,UniRef:UniRef90_Q4QL82
contig_1	Pyrodigal	gene	1320641	1322239	.	-	.	ID=GCA000012185_01323_gene;locus_tag=GCA000012185_01323;gene=lldP
contig_1	Pyrodigal	CDS	1320641	1322239	.	-	0	ID=GCA000012185_01323;Name=Putative L-lactate permease;locus_tag=GCA000012185_01323;product=Putative L-lactate permease;Dbxref=GO:0005886,GO:0015129,GO:0015295;gene=lldP;Parent=GCA000012185_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K03303,RefSeq:WP_011272449.1,SO:0001217,UniParc:UPI000053E1E8,UniRef:UniRef100_Q4QL81,UniRef:UniRef50_Q57251,UniRef:UniRef90_Q57251
contig_1	Pyrodigal	gene	1322513	1322608	.	+	.	ID=GCA000012185_01324_gene;locus_tag=GCA000012185_01324
contig_1	Pyrodigal	CDS	1322513	1322608	.	+	0	ID=GCA000012185_01324;Name=(d)CMP kinase;locus_tag=GCA000012185_01324;product=(d)CMP kinase;Parent=GCA000012185_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00014F775F,UniRef:UniRef100_A0A2S9S234,UniRef:UniRef50_A0A2S9S234,UniRef:UniRef90_A0A2S9S234
contig_1	Pyrodigal	gene	1322643	1323647	.	-	.	ID=GCA000012185_01325_gene;locus_tag=GCA000012185_01325;gene=fbp
contig_1	Pyrodigal	CDS	1322643	1323647	.	-	0	ID=GCA000012185_01325;Name=class 1 fructose-bisphosphatase;locus_tag=GCA000012185_01325;product=class 1 fructose-bisphosphatase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0005975,GO:0006000,GO:0006002,GO:0006094,GO:0030388,GO:0042132;gene=fbp;Parent=GCA000012185_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0158,COG:G,KEGG:K03841,RefSeq:WP_005657090.1,SO:0001217,UniParc:UPI000053E1E9,UniRef:UniRef100_Q4QL80,UniRef:UniRef50_Q0WBC9,UniRef:UniRef90_P45292;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	1323882	1324691	.	+	.	ID=GCA000012185_01326_gene;locus_tag=GCA000012185_01326;gene=truA
contig_1	Pyrodigal	CDS	1323882	1324691	.	+	0	ID=GCA000012185_01326;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000012185_01326;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000012185_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0101,COG:J,KEGG:K06173,RefSeq:WP_011272450.1,SO:0001217,UniParc:UPI00003CDA67,UniRef:UniRef100_Q4QL79,UniRef:UniRef50_Q8ZD27,UniRef:UniRef90_P45291;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	1324784	1325800	.	-	.	ID=GCA000012185_01327_gene;locus_tag=GCA000012185_01327;gene=yeiH
contig_1	Pyrodigal	CDS	1324784	1325800	.	-	0	ID=GCA000012185_01327;Name=UPF0324 membrane protein NMA0465;locus_tag=GCA000012185_01327;product=UPF0324 membrane protein NMA0465;Dbxref=GO:0005886;gene=yeiH;Parent=GCA000012185_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,KEGG:K19239,RefSeq:WP_011272451.1,SO:0001217,UniParc:UPI00003CDA68,UniRef:UniRef100_Q4QL78,UniRef:UniRef50_P45290,UniRef:UniRef90_P45290
contig_1	Pyrodigal	gene	1325812	1326621	.	-	.	ID=GCA000012185_01328_gene;locus_tag=GCA000012185_01328;gene=sapF
contig_1	Pyrodigal	CDS	1325812	1326621	.	-	0	ID=GCA000012185_01328;Name=Peptide transport system ATP-binding protein SapF;locus_tag=GCA000012185_01328;product=Peptide transport system ATP-binding protein SapF;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887,GO:0055085;gene=sapF;Parent=GCA000012185_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4167,COG:V,RefSeq:WP_011272452.1,SO:0001217,UniParc:UPI000053E1EA,UniRef:UniRef100_Q4QL77,UniRef:UniRef50_P45289,UniRef:UniRef90_P45289
contig_1	Pyrodigal	gene	1326621	1327670	.	-	.	ID=GCA000012185_01329_gene;locus_tag=GCA000012185_01329;gene=sapD
contig_1	Pyrodigal	CDS	1326621	1327670	.	-	0	ID=GCA000012185_01329;Name=Peptide transport system ATP-binding protein SapD;locus_tag=GCA000012185_01329;product=Peptide transport system ATP-binding protein SapD;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887;gene=sapD;Parent=GCA000012185_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4170,COG:V,RefSeq:WP_005670535.1,SO:0001217,UniParc:UPI000053E1EB,UniRef:UniRef100_A4NY14,UniRef:UniRef50_P45288,UniRef:UniRef90_P45288
contig_1	Pyrodigal	gene	1327674	1328561	.	-	.	ID=GCA000012185_01330_gene;locus_tag=GCA000012185_01330;gene=sapC
contig_1	Pyrodigal	CDS	1327674	1328561	.	-	0	ID=GCA000012185_01330;Name=Peptide transport system permease protein SapC;locus_tag=GCA000012185_01330;product=Peptide transport system permease protein SapC;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0055085;gene=sapC;Parent=GCA000012185_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4171,COG:V,KEGG:K19228,RefSeq:WP_005670531.1,SO:0001217,UniParc:UPI000053E1EC,UniRef:UniRef100_A4NY13,UniRef:UniRef50_P45287,UniRef:UniRef90_P45287
contig_1	Pyrodigal	gene	1328551	1329516	.	-	.	ID=GCA000012185_01331_gene;locus_tag=GCA000012185_01331;gene=sapB
contig_1	Pyrodigal	CDS	1328551	1329516	.	-	0	ID=GCA000012185_01331;Name=Peptide transport system permease protein SapB;locus_tag=GCA000012185_01331;product=Peptide transport system permease protein SapB;Dbxref=GO:0005886,GO:0015031,GO:0071916;gene=sapB;Parent=GCA000012185_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4168,COG:V,KEGG:K19227,RefSeq:WP_011272453.1,SO:0001217,UniParc:UPI00003CD8CA,UniRef:UniRef100_Q4QL74,UniRef:UniRef50_P45286,UniRef:UniRef90_P45286
contig_1	Pyrodigal	gene	1329516	1331210	.	-	.	ID=GCA000012185_01332_gene;locus_tag=GCA000012185_01332;gene=sapA
contig_1	Pyrodigal	CDS	1329516	1331210	.	-	0	ID=GCA000012185_01332;Name=Peptide transport periplasmic protein SapA;locus_tag=GCA000012185_01332;product=Peptide transport periplasmic protein SapA;Dbxref=GO:0015031,GO:0015833,GO:0030288,GO:0043190,GO:1904680;gene=sapA;Parent=GCA000012185_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K19226,RefSeq:WP_011272454.1,SO:0001217,UniParc:UPI000053E1ED,UniRef:UniRef100_Q4QL73,UniRef:UniRef50_P45285,UniRef:UniRef90_P45285
contig_1	Pyrodigal	gene	1331280	1332692	.	+	.	ID=GCA000012185_01333_gene;locus_tag=GCA000012185_01333;gene=ycjX
contig_1	Pyrodigal	CDS	1331280	1332692	.	+	0	ID=GCA000012185_01333;Name=Ras-like GTPase HI_1637;locus_tag=GCA000012185_01333;product=Ras-like GTPase HI_1637;Dbxref=GO:0003924,GO:0005525,GO:0019003;gene=ycjX;Parent=GCA000012185_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3106,COG:T,KEGG:K06918,RefSeq:WP_011272455.1,SO:0001217,UniParc:UPI000053E1EE,UniRef:UniRef100_Q4QL72,UniRef:UniRef50_P44280,UniRef:UniRef90_P44280;ec_number=3.6.5.2
contig_1	Pyrodigal	gene	1332729	1335368	.	-	.	ID=GCA000012185_01334_gene;locus_tag=GCA000012185_01334;gene=ppc
contig_1	Pyrodigal	CDS	1332729	1335368	.	-	0	ID=GCA000012185_01334;Name=phosphoenolpyruvate carboxylase;locus_tag=GCA000012185_01334;product=phosphoenolpyruvate carboxylase;Dbxref=GO:0000287,GO:0005829,GO:0006099,GO:0006107,GO:0008964,GO:0015977;gene=ppc;Parent=GCA000012185_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2352,RefSeq:WP_011272456.1,SO:0001217,UniParc:UPI000053E1EF,UniRef:UniRef100_Q4QL71,UniRef:UniRef50_P43920,UniRef:UniRef90_P43920;ec_number=4.1.1.31
contig_1	Pyrodigal	gene	1335551	1336561	.	-	.	ID=GCA000012185_01335_gene;locus_tag=GCA000012185_01335;gene=purR
contig_1	Pyrodigal	CDS	1335551	1336561	.	-	0	ID=GCA000012185_01335;Name=HTH-type transcriptional repressor PurR;locus_tag=GCA000012185_01335;product=HTH-type transcriptional repressor PurR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006164,GO:0006355,GO:0045892;gene=purR;Parent=GCA000012185_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_005660510.1,SO:0001217,UniParc:UPI000039AB6B,UniRef:UniRef100_Q4QL70,UniRef:UniRef50_P0ACP7,UniRef:UniRef90_P46456
contig_1	Bakta	gene	1336710	1336790	.	+	.	ID=GCA000012185_01336_gene;locus_tag=GCA000012185_01336;inference=ab initio prediction:Bakta;gene=ynhF
contig_1	Bakta	CDS	1336710	1336790	.	+	0	ID=GCA000012185_01336;Name=YnhF family membrane protein;locus_tag=GCA000012185_01336;product=YnhF family membrane protein;gene=ynhF;Parent=GCA000012185_01336_gene;Note=SO:0001217,UniParc:UPI00014F7718,UniRef:UniRef100_A0A158SY08,UniRef:UniRef50_A0AAQ1YNJ2,UniRef:UniRef90_A0A158SY08
contig_1	Pyrodigal	gene	1336924	1337751	.	+	.	ID=GCA000012185_01337_gene;locus_tag=GCA000012185_01337;gene=dapD
contig_1	Pyrodigal	CDS	1336924	1337751	.	+	0	ID=GCA000012185_01337;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;locus_tag=GCA000012185_01337;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;Dbxref=GO:0005737,GO:0008666,GO:0009089,GO:0016779,GO:0019877;gene=dapD;Parent=GCA000012185_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2171,COG:E,RefSeq:WP_011272457.1,SO:0001217,UniParc:UPI00003CD9F2,UniRef:UniRef100_Q4QL69,UniRef:UniRef50_P45284,UniRef:UniRef90_P45284;ec_number=2.3.1.117
contig_1	Pyrodigal	gene	1337808	1339106	.	-	.	ID=GCA000012185_01338_gene;locus_tag=GCA000012185_01338;gene=purA
contig_1	Pyrodigal	CDS	1337808	1339106	.	-	0	ID=GCA000012185_01338;Name=adenylosuccinate synthase;locus_tag=GCA000012185_01338;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0009152,GO:0044208,GO:0046040;gene=purA;Parent=GCA000012185_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_005660513.1,SO:0001217,UniParc:UPI000039A6D7,UniRef:UniRef100_Q4QL68,UniRef:UniRef50_P45283,UniRef:UniRef90_P45283;ec_number=6.3.4.4
contig_1	Pyrodigal	gene	1339235	1339600	.	-	.	ID=GCA000012185_01339_gene;locus_tag=GCA000012185_01339;gene=metL1
contig_1	Pyrodigal	CDS	1339235	1339600	.	-	0	ID=GCA000012185_01339;Name=Putative inactive aspartokinase 3 HI_1632;locus_tag=GCA000012185_01339;product=Putative inactive aspartokinase 3 HI_1632;Dbxref=GO:0004072,GO:0008652;gene=metL1;Parent=GCA000012185_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_005689212.1,SO:0001217,UniParc:UPI00003CDD50,UniRef:UniRef100_A0A121XMD5,UniRef:UniRef50_Q57525,UniRef:UniRef90_Q57525
contig_1	tRNAscan-SE	gene	1339908	1339984	.	+	.	ID=GCA000012185_01340_gene;locus_tag=GCA000012185_01340;gene=trnM
contig_1	tRNAscan-SE	tRNA	1339908	1339984	.	+	.	ID=GCA000012185_01340;Name=tRNA-Met(cat);locus_tag=GCA000012185_01340;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000012185_01340_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	1339990	1340074	.	+	.	ID=GCA000012185_01341_gene;locus_tag=GCA000012185_01341;gene=trnL
contig_1	tRNAscan-SE	tRNA	1339990	1340074	.	+	.	ID=GCA000012185_01341;Name=tRNA-Leu(tag);locus_tag=GCA000012185_01341;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000012185_01341_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1340103	1340177	.	+	.	ID=GCA000012185_01342_gene;locus_tag=GCA000012185_01342;gene=trnQ
contig_1	tRNAscan-SE	tRNA	1340103	1340177	.	+	.	ID=GCA000012185_01342;Name=tRNA-Gln(ttg);locus_tag=GCA000012185_01342;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000012185_01342_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	1340225	1340299	.	+	.	ID=GCA000012185_01343_gene;locus_tag=GCA000012185_01343;gene=trnQ
contig_1	tRNAscan-SE	tRNA	1340225	1340299	.	+	.	ID=GCA000012185_01343;Name=tRNA-Gln(ttg);locus_tag=GCA000012185_01343;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000012185_01343_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	Pyrodigal	gene	1340448	1340735	.	-	.	ID=GCA000012185_01344_gene;locus_tag=GCA000012185_01344;gene=rplY
contig_1	Pyrodigal	CDS	1340448	1340735	.	-	0	ID=GCA000012185_01344;Name=50S ribosomal protein L25;locus_tag=GCA000012185_01344;product=50S ribosomal protein L25;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA000012185_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1825,COG:J,KEGG:K02897,RefSeq:WP_005660520.1,SO:0001217,UniParc:UPI000053E1F1,UniRef:UniRef100_Q4QL66,UniRef:UniRef50_Q6LRY1,UniRef:UniRef90_Q4QL66
contig_1	Pyrodigal	gene	1340954	1341559	.	+	.	ID=GCA000012185_01345_gene;locus_tag=GCA000012185_01345;gene=dedA
contig_1	Pyrodigal	CDS	1340954	1341559	.	+	0	ID=GCA000012185_01345;Name=putative membrane protein HI_1629;locus_tag=GCA000012185_01345;product=putative membrane protein HI_1629;Dbxref=GO:0005886;gene=dedA;Parent=GCA000012185_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_005686571.1,SO:0001217,UniParc:UPI00003CDCA2,UniRef:UniRef100_Q4QL65,UniRef:UniRef50_P45280,UniRef:UniRef90_P45280
contig_1	Pyrodigal	gene	1341606	1342022	.	-	.	ID=GCA000012185_01346_gene;locus_tag=GCA000012185_01346;gene=zapG
contig_1	Pyrodigal	CDS	1341606	1342022	.	-	0	ID=GCA000012185_01346;Name=Z-ring associated protein G;locus_tag=GCA000012185_01346;product=Z-ring associated protein G;Dbxref=GO:0005886,GO:0008360,GO:0051301;gene=zapG;Parent=GCA000012185_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3105,COG:D,KEGG:K09908,RefSeq:WP_005686573.1,SO:0001217,UniParc:UPI00003CDCA3,UniRef:UniRef100_A0A0K9KZ25,UniRef:UniRef50_P45279,UniRef:UniRef90_P45279
contig_1	Pyrodigal	gene	1342053	1342403	.	-	.	ID=GCA000012185_01347_gene;locus_tag=GCA000012185_01347;gene=ridA
contig_1	Pyrodigal	CDS	1342053	1342403	.	-	0	ID=GCA000012185_01347;Name=RutC family protein HI_1627;locus_tag=GCA000012185_01347;product=RutC family protein HI_1627;gene=ridA;Parent=GCA000012185_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_005686574.1,SO:0001217,UniParc:UPI000053E1F3,UniRef:UniRef100_A0A0Y7I0N9,UniRef:UniRef50_P71394,UniRef:UniRef90_P71394
contig_1	Pyrodigal	gene	1342515	1343231	.	+	.	ID=GCA000012185_01348_gene;locus_tag=GCA000012185_01348
contig_1	Pyrodigal	CDS	1342515	1343231	.	+	0	ID=GCA000012185_01348;Name=putative protein HI_1626;locus_tag=GCA000012185_01348;product=putative protein HI_1626;Dbxref=GO:0005886;Parent=GCA000012185_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272458.1,SO:0001217,UniParc:UPI00003CD82D,UniRef:UniRef100_A0A121XMG0,UniRef:UniRef50_P44278,UniRef:UniRef90_P44278
contig_1	Pyrodigal	gene	1343232	1343774	.	+	.	ID=GCA000012185_01349_gene;locus_tag=GCA000012185_01349;gene=tPR
contig_1	Pyrodigal	CDS	1343232	1343774	.	+	0	ID=GCA000012185_01349;Name=Putative beta-lactamase hcpC;locus_tag=GCA000012185_01349;product=Putative beta-lactamase hcpC;gene=tPR;Parent=GCA000012185_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0790,COG:R,RefSeq:WP_005686578.1,SO:0001217,UniParc:UPI00003CD82C,UniRef:UniRef100_A0A0Y7I0Z0,UniRef:UniRef50_A0A377JK79,UniRef:UniRef90_A0A158SXZ7
contig_1	Pyrodigal	gene	1343789	1344196	.	-	.	ID=GCA000012185_01350_gene;locus_tag=GCA000012185_01350;gene=zntR
contig_1	Pyrodigal	CDS	1343789	1344196	.	-	0	ID=GCA000012185_01350;Name=HTH-type transcriptional regulator ZntR-like protein;locus_tag=GCA000012185_01350;product=HTH-type transcriptional regulator ZntR-like protein;Dbxref=GO:0003677,GO:0003700,GO:0045893,GO:0046872;gene=zntR;Parent=GCA000012185_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_005686580.1,SO:0001217,UniParc:UPI00003CD82B,UniRef:UniRef100_Q4QL60,UniRef:UniRef50_P45277,UniRef:UniRef90_P45277
contig_1	Pyrodigal	gene	1344286	1344969	.	+	.	ID=GCA000012185_01351_gene;locus_tag=GCA000012185_01351
contig_1	Pyrodigal	CDS	1344286	1344969	.	+	0	ID=GCA000012185_01351;Name=putative protein HI_1624;locus_tag=GCA000012185_01351;product=putative protein HI_1624;Parent=GCA000012185_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5266,COG:R,RefSeq:WP_005671602.1,SO:0001217,UniParc:UPI000053E1F5,UniRef:UniRef100_A0A158SXZ5,UniRef:UniRef50_P44276,UniRef:UniRef90_P44276
contig_1	Pyrodigal	gene	1344982	1345470	.	+	.	ID=GCA000012185_01352_gene;locus_tag=GCA000012185_01352
contig_1	Pyrodigal	CDS	1344982	1345470	.	+	0	ID=GCA000012185_01352;Name=putative protein HI_1622;locus_tag=GCA000012185_01352;product=putative protein HI_1622;Dbxref=GO:0016020;Parent=GCA000012185_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005686582.1,SO:0001217,UniParc:UPI00003CD828,UniRef:UniRef100_A0A2R3FXS8,UniRef:UniRef50_P44275,UniRef:UniRef90_P44275
contig_1	Pyrodigal	gene	1345470	1346090	.	+	.	ID=GCA000012185_01353_gene;locus_tag=GCA000012185_01353;gene=cbiM
contig_1	Pyrodigal	CDS	1345470	1346090	.	+	0	ID=GCA000012185_01353;Name=cobalt transporter CbiM;locus_tag=GCA000012185_01353;product=cobalt transporter CbiM;Dbxref=GO:0000041,GO:0005886;gene=cbiM;Parent=GCA000012185_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0310,COG:P,KEGG:K02007,RefSeq:WP_011272460.1,SO:0001217,UniParc:UPI00003CD827,UniRef:UniRef100_A0A2S9S6L5,UniRef:UniRef50_P44274,UniRef:UniRef90_P44274
contig_1	Pyrodigal	gene	1346090	1346722	.	+	.	ID=GCA000012185_01354_gene;locus_tag=GCA000012185_01354;gene=ecfT
contig_1	Pyrodigal	CDS	1346090	1346722	.	+	0	ID=GCA000012185_01354;Name=Aromatic-amino-acid aminotransferase;locus_tag=GCA000012185_01354;product=Aromatic-amino-acid aminotransferase;gene=ecfT;Parent=GCA000012185_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,RefSeq:WP_011272461.1,SO:0001217,UniParc:UPI000053E1F6,UniRef:UniRef100_A0A2S9S6L6,UniRef:UniRef50_E6KYN6,UniRef:UniRef90_F9GQZ7
contig_1	Pyrodigal	gene	1346724	1347350	.	+	.	ID=GCA000012185_01355_gene;locus_tag=GCA000012185_01355;gene=ecfA2
contig_1	Pyrodigal	CDS	1346724	1347350	.	+	0	ID=GCA000012185_01355;Name=putative ABC transporter ATP-binding protein HI_1618;locus_tag=GCA000012185_01355;product=putative ABC transporter ATP-binding protein HI_1618;Dbxref=GO:0005524,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000012185_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_011272462.1,SO:0001217,UniParc:UPI00003CD825,UniRef:UniRef100_A0A2S9S6Q0,UniRef:UniRef50_P45275,UniRef:UniRef90_P45275
contig_1	Pyrodigal	gene	1347457	1348647	.	-	.	ID=GCA000012185_01356_gene;locus_tag=GCA000012185_01356;gene=aspC
contig_1	Pyrodigal	CDS	1347457	1348647	.	-	0	ID=GCA000012185_01356;Name=Aspartate aminotransferase;locus_tag=GCA000012185_01356;product=Aspartate aminotransferase;Dbxref=GO:0004069,GO:0004838,GO:0005829,GO:0030170,GO:0033585,GO:0042802;gene=aspC;Parent=GCA000012185_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1448,COG:E,RefSeq:WP_005657030.1,SO:0001217,UniParc:UPI00003CD824,UniRef:UniRef100_A0A0H3PE32,UniRef:UniRef50_P00509,UniRef:UniRef90_P44425;ec_number=2.6.1.1
contig_1	Pyrodigal	gene	1348787	1349875	.	-	.	ID=GCA000012185_01357_gene;locus_tag=GCA000012185_01357;gene=purK
contig_1	Pyrodigal	CDS	1348787	1349875	.	-	0	ID=GCA000012185_01357;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000012185_01357;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000012185_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0026,COG:F,RefSeq:WP_005686592.1,SO:0001217,UniParc:UPI00003CD823,UniRef:UniRef100_A0A2R3GU25,UniRef:UniRef50_P43850,UniRef:UniRef90_P43850;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	1349945	1350439	.	-	.	ID=GCA000012185_01358_gene;locus_tag=GCA000012185_01358;gene=purE
contig_1	Pyrodigal	CDS	1349945	1350439	.	-	0	ID=GCA000012185_01358;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000012185_01358;product=N5-carboxyaminoimidazole ribonucleotide mutase;Dbxref=GO:0006189,GO:0034023;gene=purE;Parent=GCA000012185_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0041,COG:F,RefSeq:WP_005653194.1,SO:0001217,UniParc:UPI000053E1F7,UniRef:UniRef100_A0A0H3PDG7,UniRef:UniRef50_P43849,UniRef:UniRef90_P43849;ec_number=5.4.99.18
contig_1	Pyrodigal	gene	1350610	1350858	.	+	.	ID=GCA000012185_01359_gene;locus_tag=GCA000012185_01359;gene=hicA
contig_1	Pyrodigal	CDS	1350610	1350858	.	+	0	ID=GCA000012185_01359;Name=HicA;locus_tag=GCA000012185_01359;product=HicA;gene=hicA;Parent=GCA000012185_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653200.1,SO:0001217,UniParc:UPI00000BE0EE,UniRef:UniRef100_Q708Z5,UniRef:UniRef50_N8ZPI0,UniRef:UniRef90_A0A2S9RN68
contig_1	Pyrodigal	gene	1350855	1351199	.	+	.	ID=GCA000012185_01360_gene;locus_tag=GCA000012185_01360;gene=hicB
contig_1	Pyrodigal	CDS	1350855	1351199	.	+	0	ID=GCA000012185_01360;Name=Toxin-antitoxin system%2C antitoxin component%2C HicB family;locus_tag=GCA000012185_01360;product=Toxin-antitoxin system%2C antitoxin component%2C HicB family;gene=hicB;Parent=GCA000012185_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4226,COG:R,RefSeq:WP_005653201.1,SO:0001217,UniParc:UPI00000B90E5,UniRef:UniRef100_H1LM32,UniRef:UniRef50_N8ZW11,UniRef:UniRef90_H1LM32
contig_1	Pyrodigal	gene	1351243	1353852	.	+	.	ID=GCA000012185_01361_gene;locus_tag=GCA000012185_01361;gene=pepN
contig_1	Pyrodigal	CDS	1351243	1353852	.	+	0	ID=GCA000012185_01361;Name=aminopeptidase N;locus_tag=GCA000012185_01361;product=aminopeptidase N;Dbxref=GO:0004177,GO:0005886,GO:0006508,GO:0008237,GO:0008270;gene=pepN;Parent=GCA000012185_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0308,COG:E,RefSeq:WP_011272463.1,SO:0001217,UniParc:UPI000053E1F8,UniRef:UniRef100_A0A2S9S6J0,UniRef:UniRef50_P04825,UniRef:UniRef90_P45274;ec_number=3.4.11.2
contig_1	Pyrodigal	gene	1353924	1354538	.	-	.	ID=GCA000012185_01362_gene;locus_tag=GCA000012185_01362;gene=ribE
contig_1	Pyrodigal	CDS	1353924	1354538	.	-	0	ID=GCA000012185_01362;Name=riboflavin synthase;locus_tag=GCA000012185_01362;product=riboflavin synthase;Dbxref=GO:0004746,GO:0005829,GO:0009231;gene=ribE;Parent=GCA000012185_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_005657019.1,SO:0001217,UniParc:UPI00003CDABD,UniRef:UniRef100_A0A0H3PLU0,UniRef:UniRef50_P45273,UniRef:UniRef90_P45273;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1354582	1355976	.	+	.	ID=GCA000012185_01363_gene;locus_tag=GCA000012185_01363;gene=hmrM
contig_1	Pyrodigal	CDS	1354582	1355976	.	+	0	ID=GCA000012185_01363;Name=sodium-coupled multidrug efflux MATE transporter HmrM;locus_tag=GCA000012185_01363;product=sodium-coupled multidrug efflux MATE transporter HmrM;Dbxref=GO:0005886,GO:0006814,GO:0015297,GO:0016020,GO:0042910,GO:0046677;gene=hmrM;Parent=GCA000012185_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693623,COG:COG0534,COG:V,NCBIProtein:AAC23256.1,RefSeq:WP_005657016.1,SO:0001217,UniParc:UPI00003CDABC,UniRef:UniRef100_A0A0H3PDG3,UniRef:UniRef50_P45272,UniRef:UniRef90_P45272
contig_1	Pyrodigal	gene	1355985	1356701	.	+	.	ID=GCA000012185_01364_gene;locus_tag=GCA000012185_01364;gene=sfsA
contig_1	Pyrodigal	CDS	1355985	1356701	.	+	0	ID=GCA000012185_01364;Name=DNA/RNA nuclease SfsA;locus_tag=GCA000012185_01364;product=DNA/RNA nuclease SfsA;Dbxref=GO:0003677;gene=sfsA;Parent=GCA000012185_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1489,COG:GT,KEGG:K06206,RefSeq:WP_005632483.1,SO:0001217,UniParc:UPI000053E1F9,UniRef:UniRef100_Q4QL46,UniRef:UniRef50_Q8ZRQ6,UniRef:UniRef90_P46457
contig_1	Pyrodigal	gene	1356901	1358088	.	+	.	ID=GCA000012185_01365_gene;locus_tag=GCA000012185_01365;gene=tyrS
contig_1	Pyrodigal	CDS	1356901	1358088	.	+	0	ID=GCA000012185_01365;Name=tyrosine--tRNA ligase;locus_tag=GCA000012185_01365;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437,GO:0043039;gene=tyrS;Parent=GCA000012185_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_005657010.1,SO:0001217,UniParc:UPI00003CDA64,UniRef:UniRef100_Q4QL45,UniRef:UniRef50_P43836,UniRef:UniRef90_P43836;ec_number=6.1.1.1
contig_1	Pyrodigal	gene	1358152	1359099	.	-	.	ID=GCA000012185_01366_gene;locus_tag=GCA000012185_01366;gene=prs
contig_1	Pyrodigal	CDS	1358152	1359099	.	-	0	ID=GCA000012185_01366;Name=Ribose-phosphate pyrophosphokinase;locus_tag=GCA000012185_01366;product=Ribose-phosphate pyrophosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0006015,GO:0006164,GO:0009156,GO:0016301;gene=prs;Parent=GCA000012185_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_005657007.1,SO:0001217,UniParc:UPI00003CDA65,UniRef:UniRef100_A0A0H3PE21,UniRef:UniRef50_Q63XL8,UniRef:UniRef90_P44328;ec_number=2.7.6.1
contig_1	Pyrodigal	gene	1359101	1360054	.	-	.	ID=GCA000012185_01367_gene;locus_tag=GCA000012185_01367;gene=ispE
contig_1	Pyrodigal	CDS	1359101	1360054	.	-	0	ID=GCA000012185_01367;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA000012185_01367;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0005524,GO:0016114,GO:0019288,GO:0050515;gene=ispE;Parent=GCA000012185_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1947,COG:I,SO:0001217,UniParc:UPI000053E1FA,UniRef:UniRef100_Q4QL43,UniRef:UniRef50_P62615,UniRef:UniRef90_Q4QL43;ec_number=2.7.1.148
contig_1	Pyrodigal	gene	1360054	1360683	.	-	.	ID=GCA000012185_01368_gene;locus_tag=GCA000012185_01368;gene=lolB
contig_1	Pyrodigal	CDS	1360054	1360683	.	-	0	ID=GCA000012185_01368;Name=lipoprotein insertase outer membrane protein LolB;locus_tag=GCA000012185_01368;product=lipoprotein insertase outer membrane protein LolB;Dbxref=GO:0009279,GO:0015031,GO:0044874;gene=lolB;Parent=GCA000012185_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02494,SO:0001217,UniParc:UPI000053E1FB,UniRef:UniRef100_Q4QL42,UniRef:UniRef50_P45270,UniRef:UniRef90_P45270
contig_1	Pyrodigal	gene	1360746	1361996	.	-	.	ID=GCA000012185_01369_gene;locus_tag=GCA000012185_01369;gene=cca
contig_1	Pyrodigal	CDS	1360746	1361996	.	-	0	ID=GCA000012185_01369;Name=multifunctional CCA addition/repair protein;locus_tag=GCA000012185_01369;product=multifunctional CCA addition/repair protein;Dbxref=GO:0000049,GO:0000287,GO:0001680,GO:0003723,GO:0004112,GO:0004810,GO:0005524,GO:0016791,GO:0042245,GO:0160016;gene=cca;Parent=GCA000012185_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,RefSeq:WP_005656997.1,SO:0001217,UniParc:UPI000053E1FC,UniRef:UniRef100_A5UCK0,UniRef:UniRef50_P45269,UniRef:UniRef90_P45269;ec_number=3.1.4.-
contig_1	Pyrodigal	gene	1362003	1362614	.	-	.	ID=GCA000012185_01370_gene;locus_tag=GCA000012185_01370;gene=ygiM
contig_1	Pyrodigal	CDS	1362003	1362614	.	-	0	ID=GCA000012185_01370;Name=TIGR04211 family SH3 domain-containing protein;locus_tag=GCA000012185_01370;product=TIGR04211 family SH3 domain-containing protein;Dbxref=GO:0016020;gene=ygiM;Parent=GCA000012185_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3103,COG:R,RefSeq:WP_005656994.1,SO:0001217,UniParc:UPI000053E1FD,UniRef:UniRef100_A0A0H3PCJ9,UniRef:UniRef50_P44272,UniRef:UniRef90_P44272
contig_1	Pyrodigal	gene	1362680	1363942	.	-	.	ID=GCA000012185_01371_gene;locus_tag=GCA000012185_01371;gene=pitA
contig_1	Pyrodigal	CDS	1362680	1363942	.	-	0	ID=GCA000012185_01371;Name=Putative phosphate permease HI_1604;locus_tag=GCA000012185_01371;product=Putative phosphate permease HI_1604;Dbxref=GO:0005315,GO:0005886,GO:0035435;gene=pitA;Parent=GCA000012185_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,RefSeq:WP_005660565.1,SO:0001217,UniParc:UPI000053E1FE,UniRef:UniRef100_A0A2R3FMI8,UniRef:UniRef50_P45268,UniRef:UniRef90_P45268
contig_1	Pyrodigal	gene	1363967	1364647	.	-	.	ID=GCA000012185_01372_gene;locus_tag=GCA000012185_01372;gene=ykaA
contig_1	Pyrodigal	CDS	1363967	1364647	.	-	0	ID=GCA000012185_01372;Name=UPF0111 protein HI_1603;locus_tag=GCA000012185_01372;product=UPF0111 protein HI_1603;gene=ykaA;Parent=GCA000012185_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1392,COG:P,RefSeq:WP_005647270.1,SO:0001217,UniParc:UPI000013AF0C,UniRef:UniRef100_P44271,UniRef:UniRef50_P44271,UniRef:UniRef90_P44271
contig_1	Pyrodigal	gene	1364870	1365310	.	+	.	ID=GCA000012185_01373_gene;locus_tag=GCA000012185_01373;gene=doxX
contig_1	Pyrodigal	CDS	1364870	1365310	.	+	0	ID=GCA000012185_01373;Name=putative protein HI_1602;locus_tag=GCA000012185_01373;product=putative protein HI_1602;Dbxref=GO:0005886;gene=doxX;Parent=GCA000012185_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_005656983.1,SO:0001217,UniParc:UPI00014F7677,UniRef:UniRef100_Q4QL37,UniRef:UniRef50_P44270,UniRef:UniRef90_P44270
contig_1	Pyrodigal	gene	1365349	1365636	.	+	.	ID=GCA000012185_01374_gene;locus_tag=GCA000012185_01374
contig_1	Pyrodigal	CDS	1365349	1365636	.	+	0	ID=GCA000012185_01374;Name=putative protein HI_1601;locus_tag=GCA000012185_01374;product=putative protein HI_1601;Parent=GCA000012185_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3767,COG:S,RefSeq:WP_005656980.1,SO:0001217,UniParc:UPI00003CD873,UniRef:UniRef100_A0A0H3PCJ5,UniRef:UniRef50_P44269,UniRef:UniRef90_P44269
contig_1	Pyrodigal	gene	1365696	1366619	.	+	.	ID=GCA000012185_01375_gene;locus_tag=GCA000012185_01375
contig_1	Pyrodigal	CDS	1365696	1366619	.	+	0	ID=GCA000012185_01375;Name=UPF0276 protein CGSHiEE_05645;locus_tag=GCA000012185_01375;product=UPF0276 protein CGSHiEE_05645;Parent=GCA000012185_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3220,COG:S,KEGG:K09930,RefSeq:WP_005647267.1,SO:0001217,UniParc:UPI00001BDCBD,UniRef:UniRef100_P44268,UniRef:UniRef50_P44268,UniRef:UniRef90_P44268
contig_1	Pyrodigal	gene	1366609	1367325	.	+	.	ID=GCA000012185_01376_gene;locus_tag=GCA000012185_01376
contig_1	Pyrodigal	CDS	1366609	1367325	.	+	0	ID=GCA000012185_01376;Name=putative protein HI_1599;locus_tag=GCA000012185_01376;product=putative protein HI_1599;Parent=GCA000012185_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3219,COG:S,KEGG:K09929,RefSeq:WP_011272466.1,SO:0001217,UniParc:UPI00003CD872,UniRef:UniRef100_Q4QL34,UniRef:UniRef50_P44267,UniRef:UniRef90_P44267
contig_1	Pyrodigal	gene	1368436	1368600	.	+	.	ID=GCA000012185_01377_gene;locus_tag=GCA000012185_01377
contig_1	Pyrodigal	CDS	1368436	1368600	.	+	0	ID=GCA000012185_01377;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000012185_01377;product=Helix-turn-helix domain-containing protein;Parent=GCA000012185_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001545866,UniRef:UniRef100_A0AB34I6P8,UniRef:UniRef50_A0AB34I6P8,UniRef:UniRef90_A0AB34I6P8
contig_1	Pyrodigal	gene	1369918	1371870	.	-	.	ID=GCA000012185_01378_gene;locus_tag=GCA000012185_01378;gene=hmw1C
contig_1	Pyrodigal	CDS	1369918	1371870	.	-	0	ID=GCA000012185_01378;Name=glycosyltransferase;locus_tag=GCA000012185_01378;product=glycosyltransferase;gene=hmw1C;Parent=GCA000012185_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3914,COG:O,RefSeq:WP_011272470.1,SO:0001217,UniParc:UPI000053E202,UniRef:UniRef100_Q4QL30,UniRef:UniRef50_B3H2N2,UniRef:UniRef90_Q48033,VFDB:VFC0001,VFDB:VFG001153
contig_1	Pyrodigal	gene	1371899	1372168	.	+	.	ID=GCA000012185_01379_gene;locus_tag=GCA000012185_01379
contig_1	Pyrodigal	CDS	1371899	1372168	.	+	0	ID=GCA000012185_01379;Name=hypothetical protein;locus_tag=GCA000012185_01379;product=hypothetical protein;Parent=GCA000012185_01379_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1372262	1373899	.	-	.	ID=GCA000012185_01380_gene;locus_tag=GCA000012185_01380;gene=hmw1B
contig_1	Pyrodigal	CDS	1372262	1373899	.	-	0	ID=GCA000012185_01380;Name=two-partner secretion (TPS) system translocator Hmw1B;locus_tag=GCA000012185_01380;product=two-partner secretion (TPS) system translocator Hmw1B;gene=hmw1B;Parent=GCA000012185_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_014550670,BlastRules:WP_014550854,COG:COG2831,COG:U,RefSeq:WP_011272471.1,SO:0001217,UniParc:UPI00003CD8E8,UniRef:UniRef100_Q4QL29,UniRef:UniRef50_Q4QJR3,UniRef:UniRef90_Q4QJR3
contig_1	Pyrodigal	gene	1374050	1378678	.	-	.	ID=GCA000012185_01381_gene;locus_tag=GCA000012185_01381
contig_1	Pyrodigal	CDS	1374050	1378678	.	-	0	ID=GCA000012185_01381;Name=HMW2A%2C high molecular weight adhesin 2;locus_tag=GCA000012185_01381;product=HMW2A%2C high molecular weight adhesin 2;Parent=GCA000012185_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272472.1,SO:0001217,UniParc:UPI000053E203,UniRef:UniRef100_Q4QL28,UniRef:UniRef50_Q70EM3,UniRef:UniRef90_Q4QL28
contig_1	Pyrodigal	gene	1379103	1380149	.	+	.	ID=GCA000012185_01382_gene;locus_tag=GCA000012185_01382;gene=pPPi
contig_1	Pyrodigal	CDS	1379103	1380149	.	+	0	ID=GCA000012185_01382;Name=Inorganic triphosphatase;locus_tag=GCA000012185_01382;product=Inorganic triphosphatase;Dbxref=GO:0046872,GO:0050355;gene=pPPi;Parent=GCA000012185_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3025,COG:P,KEGG:K18446,RefSeq:WP_011272473.1,SO:0001217,UniParc:UPI00000B96F0,UniRef:UniRef100_Q9RNI3,UniRef:UniRef50_P45267,UniRef:UniRef90_P45267;ec_number=3.6.1.25
contig_1	Pyrodigal	gene	1380382	1381758	.	+	.	ID=GCA000012185_01383_gene;locus_tag=GCA000012185_01383;gene=radA
contig_1	Pyrodigal	CDS	1380382	1381758	.	+	0	ID=GCA000012185_01383;Name=DNA repair protein RadA;locus_tag=GCA000012185_01383;product=DNA repair protein RadA;Dbxref=GO:0000725,GO:0003684,GO:0005524,GO:0006281,GO:0016887,GO:0046872,GO:0140664;gene=radA;Parent=GCA000012185_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_005656935.1,SO:0001217,UniParc:UPI00003CD86E,UniRef:UniRef100_A0A0H3PI71,UniRef:UniRef50_P24554,UniRef:UniRef90_P45266;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1381838	1382317	.	+	.	ID=GCA000012185_01384_gene;locus_tag=GCA000012185_01384;gene=lrp
contig_1	Pyrodigal	CDS	1381838	1382317	.	+	0	ID=GCA000012185_01384;Name=leucine-responsive transcriptional regulator Lrp;locus_tag=GCA000012185_01384;product=leucine-responsive transcriptional regulator Lrp;Dbxref=GO:0005829,GO:0006524,GO:0043201,GO:0043565;gene=lrp;Parent=GCA000012185_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005653255.1,SO:0001217,UniParc:UPI000039A6B3,UniRef:UniRef100_A0A0Y7LWW1,UniRef:UniRef50_P45265,UniRef:UniRef90_P45265
contig_1	Pyrodigal	gene	1382319	1385075	.	+	.	ID=GCA000012185_01385_gene;locus_tag=GCA000012185_01385;gene=ftsK
contig_1	Pyrodigal	CDS	1382319	1385075	.	+	0	ID=GCA000012185_01385;Name=DNA translocase FtsK;locus_tag=GCA000012185_01385;product=DNA translocase FtsK;gene=ftsK;Parent=GCA000012185_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272474.1,SO:0001217,UniParc:UPI000053E205,UniRef:UniRef100_Q4QL24,UniRef:UniRef50_Q9CP13,UniRef:UniRef90_Q4QL24
contig_1	Pyrodigal	gene	1385093	1385710	.	+	.	ID=GCA000012185_01386_gene;locus_tag=GCA000012185_01386;gene=lolA
contig_1	Pyrodigal	CDS	1385093	1385710	.	+	0	ID=GCA000012185_01386;Name=outer membrane lipoprotein chaperone LolA;locus_tag=GCA000012185_01386;product=outer membrane lipoprotein chaperone LolA;Dbxref=GO:0030288,GO:0042597,GO:0042953,GO:0044874;gene=lolA;Parent=GCA000012185_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2834,COG:M,KEGG:K03634,RefSeq:WP_005661471.1,SO:0001217,UniParc:UPI00003CDB38,UniRef:UniRef100_Q4QL23,UniRef:UniRef50_P45263,UniRef:UniRef90_P45263
contig_1	Pyrodigal	gene	1385771	1387111	.	+	.	ID=GCA000012185_01387_gene;locus_tag=GCA000012185_01387;gene=rarA
contig_1	Pyrodigal	CDS	1385771	1387111	.	+	0	ID=GCA000012185_01387;Name=Replication-associated recombination protein A;locus_tag=GCA000012185_01387;product=Replication-associated recombination protein A;Dbxref=GO:0000731,GO:0003677,GO:0005524,GO:0006261,GO:0008047,GO:0016887,GO:0017116;gene=rarA;Parent=GCA000012185_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2256,COG:L,KEGG:K07478,RefSeq:WP_011272475.1,SO:0001217,UniParc:UPI000053E206,UniRef:UniRef100_Q4QL22,UniRef:UniRef50_P45262,UniRef:UniRef90_P45262
contig_1	Pyrodigal	gene	1387199	1388341	.	-	.	ID=GCA000012185_01388_gene;locus_tag=GCA000012185_01388
contig_1	Pyrodigal	CDS	1387199	1388341	.	-	0	ID=GCA000012185_01388;Name=Restriction endonuclease;locus_tag=GCA000012185_01388;product=Restriction endonuclease;Parent=GCA000012185_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272476.1,SO:0001217,UniParc:UPI000045E934,UniRef:UniRef100_Q4QL21,UniRef:UniRef50_A0A9D2GQU9,UniRef:UniRef90_Q4QL21
contig_1	Pyrodigal	gene	1388351	1389538	.	-	.	ID=GCA000012185_01389_gene;locus_tag=GCA000012185_01389
contig_1	Pyrodigal	CDS	1388351	1389538	.	-	0	ID=GCA000012185_01389;Name=Cytosine-specific methyltransferase;locus_tag=GCA000012185_01389;product=Cytosine-specific methyltransferase;Parent=GCA000012185_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00558,SO:0001217,UniRef:UniRef50_A0A174X6G3,UniRef:UniRef90_A0A2S9RSA1;ec_number=2.1.1.37
contig_1	Pyrodigal	gene	1389829	1391127	.	-	.	ID=GCA000012185_01390_gene;locus_tag=GCA000012185_01390;gene=aroA
contig_1	Pyrodigal	CDS	1389829	1391127	.	-	0	ID=GCA000012185_01390;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000012185_01390;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000012185_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_011272478.1,SO:0001217,UniParc:UPI00003CD9E6,UniRef:UniRef100_Q4QL19,UniRef:UniRef50_P0A6D3,UniRef:UniRef90_Q03421;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	1391127	1391963	.	-	.	ID=GCA000012185_01391_gene;locus_tag=GCA000012185_01391;gene=purU
contig_1	Pyrodigal	CDS	1391127	1391963	.	-	0	ID=GCA000012185_01391;Name=formyltetrahydrofolate deformylase;locus_tag=GCA000012185_01391;product=formyltetrahydrofolate deformylase;Dbxref=GO:0006189,GO:0006730,GO:0008864;gene=purU;Parent=GCA000012185_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0788,COG:F,RefSeq:WP_005661478.1,SO:0001217,UniParc:UPI000039A6AC,UniRef:UniRef100_A0A158SXU1,UniRef:UniRef50_P37051,UniRef:UniRef90_Q03432;ec_number=3.5.1.10
contig_1	Pyrodigal	gene	1392033	1392437	.	-	.	ID=GCA000012185_01392_gene;locus_tag=GCA000012185_01392;gene=hns
contig_1	Pyrodigal	CDS	1392033	1392437	.	-	0	ID=GCA000012185_01392;Name=DNA-binding H-NS-like protein;locus_tag=GCA000012185_01392;product=DNA-binding H-NS-like protein;Dbxref=GO:0000976,GO:0001217,GO:0003680,GO:0003681,GO:0005829,GO:0009295,GO:0030527,GO:0032993,GO:0046983;gene=hns;Parent=GCA000012185_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG2916,RefSeq:WP_005647241.1,SO:0001217,UniParc:UPI000012CAA0,UniRef:UniRef100_P43841,UniRef:UniRef50_P43841,UniRef:UniRef90_P43841
contig_1	Infernal	regulatory_region	1392646	1392822	1.6e-20	+	.	ID=JPLKGDNPJF_97;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1392880	1394400	.	+	.	ID=GCA000012185_01393_gene;locus_tag=GCA000012185_01393;gene=nhaC
contig_1	Pyrodigal	CDS	1392880	1394400	.	+	0	ID=GCA000012185_01393;Name=putative protein HI_1586;locus_tag=GCA000012185_01393;product=putative protein HI_1586;Dbxref=GO:0005886;gene=nhaC;Parent=GCA000012185_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K18218,RefSeq:WP_041174629.1,SO:0001217,UniParc:UPI000045E933,UniRef:UniRef100_Q4QL16,UniRef:UniRef50_P44263,UniRef:UniRef90_P44263
contig_1	Pyrodigal	gene	1394667	1396388	.	+	.	ID=GCA000012185_01394_gene;locus_tag=GCA000012185_01394;gene=ilvI
contig_1	Pyrodigal	CDS	1394667	1396388	.	+	0	ID=GCA000012185_01394;Name=acetolactate synthase 3 large subunit;locus_tag=GCA000012185_01394;product=acetolactate synthase 3 large subunit;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvI;Parent=GCA000012185_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_005656914.1,SO:0001217,UniParc:UPI000045E932,UniRef:UniRef100_A0A0H3PDG9,UniRef:UniRef50_P45261,UniRef:UniRef90_P45261;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	1396388	1396879	.	+	.	ID=GCA000012185_01395_gene;locus_tag=GCA000012185_01395;gene=ilvN
contig_1	Pyrodigal	CDS	1396388	1396879	.	+	0	ID=GCA000012185_01395;Name=acetolactate synthase small subunit;locus_tag=GCA000012185_01395;product=acetolactate synthase small subunit;Dbxref=GO:0003984,GO:0005829,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:1990610;gene=ilvN;Parent=GCA000012185_01395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0440,COG:E,KEGG:K01653,RefSeq:WP_005647229.1,SO:0001217,UniParc:UPI000012D5AF,UniRef:UniRef100_P45260,UniRef:UniRef50_P00894,UniRef:UniRef90_P45260;ec_number=2.2.1.6
contig_1	Infernal	gene	1397042	1397119	.	+	.	ID=GCA000012185_01396_gene;locus_tag=GCA000012185_01396;gene=AaHKsRNA20
contig_1	Infernal	ncRNA	1397042	1397119	4.8e-14	+	.	ID=GCA000012185_01396;Name=Aggregatibacter sRNA 20;locus_tag=GCA000012185_01396;product=Aggregatibacter sRNA 20;Dbxref=RFAM:RF02898;Parent=GCA000012185_01396_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02898
contig_1	Pyrodigal	gene	1397173	1398906	.	-	.	ID=GCA000012185_01397_gene;locus_tag=GCA000012185_01397;gene=argS
contig_1	Pyrodigal	CDS	1397173	1398906	.	-	0	ID=GCA000012185_01397;Name=arginine--tRNA ligase;locus_tag=GCA000012185_01397;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA000012185_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_011272480.1,SO:0001217,UniParc:UPI00003CDB40,UniRef:UniRef100_Q4QL12,UniRef:UniRef50_P11875,UniRef:UniRef90_P43832;ec_number=6.1.1.19
contig_1	Pyrodigal	gene	1398986	1399555	.	+	.	ID=GCA000012185_01398_gene;locus_tag=GCA000012185_01398;gene=yecM
contig_1	Pyrodigal	CDS	1398986	1399555	.	+	0	ID=GCA000012185_01398;Name=VOC family protein;locus_tag=GCA000012185_01398;product=VOC family protein;Dbxref=GO:0005829;gene=yecM;Parent=GCA000012185_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3102,COG:R,RefSeq:WP_011272481.1,SO:0001217,UniParc:UPI000053E20A,UniRef:UniRef100_Q4QL11,UniRef:UniRef50_P44262,UniRef:UniRef90_P44262
contig_1	Pyrodigal	gene	1399634	1399855	.	+	.	ID=GCA000012185_01399_gene;locus_tag=GCA000012185_01399
contig_1	Pyrodigal	CDS	1399634	1399855	.	+	0	ID=GCA000012185_01399;Name=Hypothetical lipoprotein;locus_tag=GCA000012185_01399;product=Hypothetical lipoprotein;Parent=GCA000012185_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CDCA9,UniRef:UniRef100_Q4QL10,UniRef:UniRef50_Q4QL10,UniRef:UniRef90_Q4QL10
contig_1	Pyrodigal	gene	1399878	1400342	.	+	.	ID=GCA000012185_01400_gene;locus_tag=GCA000012185_01400
contig_1	Pyrodigal	CDS	1399878	1400342	.	+	0	ID=GCA000012185_01400;Name=Outer membrane lipoprotein PCP;locus_tag=GCA000012185_01400;product=Outer membrane lipoprotein PCP;Parent=GCA000012185_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06077,RefSeq:WP_011272483.1,SO:0001217,UniParc:UPI00003CDCA8,UniRef:UniRef100_Q4QL09,UniRef:UniRef50_W1N5G6,UniRef:UniRef90_Q4QL09
contig_1	Pyrodigal	gene	1400526	1401497	.	-	.	ID=GCA000012185_01401_gene;locus_tag=GCA000012185_01401;gene=lgtA
contig_1	Pyrodigal	CDS	1400526	1401497	.	-	0	ID=GCA000012185_01401;Name=N-acetylglucosamine glycosyltransferase;locus_tag=GCA000012185_01401;product=N-acetylglucosamine glycosyltransferase;Dbxref=GO:0016757;gene=lgtA;Parent=GCA000012185_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_011272484.1,SO:0001217,UniParc:UPI000053E20B,UniRef:UniRef100_Q4QL08,UniRef:UniRef50_Q57287,UniRef:UniRef90_Q57287,VFDB:VFC0258,VFDB:VFG013471;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1402135	1403784	.	-	.	ID=GCA000012185_01402_gene;locus_tag=GCA000012185_01402;gene=pgi
contig_1	Pyrodigal	CDS	1402135	1403784	.	-	0	ID=GCA000012185_01402;Name=glucose-6-phosphate isomerase;locus_tag=GCA000012185_01402;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000012185_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0166,COG:G,RefSeq:WP_011272485.1,SO:0001217,UniParc:UPI00005D3C03,UniRef:UniRef100_Q4QL07,UniRef:UniRef50_P0A6T1,UniRef:UniRef90_P44312;ec_number=5.3.1.9
contig_1	Pyrodigal	gene	1403881	1404963	.	-	.	ID=GCA000012185_01403_gene;locus_tag=GCA000012185_01403;gene=alr
contig_1	Pyrodigal	CDS	1403881	1404963	.	-	0	ID=GCA000012185_01403;Name=alanine racemase;locus_tag=GCA000012185_01403;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000012185_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_005687729.1,SO:0001217,UniParc:UPI00003CD912,UniRef:UniRef100_A0AAJ8WD15,UniRef:UniRef50_P45257,UniRef:UniRef90_P45257;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	1404973	1406379	.	-	.	ID=GCA000012185_01404_gene;locus_tag=GCA000012185_01404;gene=dnaB
contig_1	Pyrodigal	CDS	1404973	1406379	.	-	0	ID=GCA000012185_01404;Name=replicative DNA helicase;locus_tag=GCA000012185_01404;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005829,GO:0006268,GO:0006269,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990077,GO:1990518;gene=dnaB;Parent=GCA000012185_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,KEGG:K02314,RefSeq:WP_041174759.1,SO:0001217,UniParc:UPI0002EF997D,UniRef:UniRef100_Q4QL05,UniRef:UniRef50_P45256,UniRef:UniRef90_P45256;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	1406521	1407957	.	-	.	ID=GCA000012185_01405_gene;locus_tag=GCA000012185_01405;gene=pyk
contig_1	Pyrodigal	CDS	1406521	1407957	.	-	0	ID=GCA000012185_01405;Name=pyruvate kinase;locus_tag=GCA000012185_01405;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0005737,GO:0005829,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000012185_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0469,COG:G,KEGG:K00873,RefSeq:WP_005687732.1,SO:0001217,UniParc:UPI000053E20E,UniRef:UniRef100_A0AAJ8WRY4,UniRef:UniRef50_P43924,UniRef:UniRef90_P43924;ec_number=2.7.1.40
contig_1	tRNAscan-SE	gene	1408188	1408264	.	+	.	ID=GCA000012185_01406_gene;locus_tag=GCA000012185_01406;gene=trnV
contig_1	tRNAscan-SE	tRNA	1408188	1408264	.	+	.	ID=GCA000012185_01406;Name=tRNA-Val(gac);locus_tag=GCA000012185_01406;product=tRNA-Val(gac);gene=trnV;anti_codon=gac;amino_acid=Val;Parent=GCA000012185_01406_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Infernal	gene	1408226	1408362	.	-	.	ID=GCA000012185_01407_gene;locus_tag=GCA000012185_01407;gene=HPnc0260
contig_1	Infernal	ncRNA	1408226	1408362	2.6e-08	-	.	ID=GCA000012185_01407;Name=Bacterial antisense RNA HPnc0260;locus_tag=GCA000012185_01407;product=Bacterial antisense RNA HPnc0260;Dbxref=RFAM:RF02194;Parent=GCA000012185_01407_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF02194
contig_1	Pyrodigal	gene	1408506	1409753	.	+	.	ID=GCA000012185_01408_gene;locus_tag=GCA000012185_01408
contig_1	Pyrodigal	CDS	1408506	1409753	.	+	0	ID=GCA000012185_01408;Name=Integrase;locus_tag=GCA000012185_01408;product=Integrase;Parent=GCA000012185_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005647201.1,SO:0001217,UniParc:UPI00003CD857,UniRef:UniRef100_Q4QL03,UniRef:UniRef50_A0A8S5M0I9,UniRef:UniRef90_A0A8S5TY11
contig_1	Pyrodigal	gene	1409750	1409950	.	-	.	ID=GCA000012185_01409_gene;locus_tag=GCA000012185_01409;gene=alpA
contig_1	Pyrodigal	CDS	1409750	1409950	.	-	0	ID=GCA000012185_01409;Name=AlpA family phage regulatory protein;locus_tag=GCA000012185_01409;product=AlpA family phage regulatory protein;gene=alpA;Parent=GCA000012185_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005647199.1,SO:0001217,UniParc:UPI00014F76F8,UniRef:UniRef100_A0AAX3ITZ6,UniRef:UniRef50_A4NZL0,UniRef:UniRef90_A4NZL0
contig_1	Pyrodigal	gene	1410076	1410363	.	-	.	ID=GCA000012185_01410_gene;locus_tag=GCA000012185_01410
contig_1	Pyrodigal	CDS	1410076	1410363	.	-	0	ID=GCA000012185_01410;Name=hypothetical protein;locus_tag=GCA000012185_01410;product=hypothetical protein;Parent=GCA000012185_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668273.1,SO:0001217,UniParc:UPI00003CD858,UniRef:UniRef100_A0A2S9RFP7,UniRef:UniRef50_A0A2S9RFP7,UniRef:UniRef90_A0A2S9RFP7
contig_1	Pyrodigal	gene	1410367	1410636	.	-	.	ID=GCA000012185_01411_gene;locus_tag=GCA000012185_01411
contig_1	Pyrodigal	CDS	1410367	1410636	.	-	0	ID=GCA000012185_01411;Name=DUF551 domain-containing protein;locus_tag=GCA000012185_01411;product=DUF551 domain-containing protein;Parent=GCA000012185_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668271.1,SO:0001217,UniParc:UPI00003CD859,UniRef:UniRef100_A0A2S9RG34,UniRef:UniRef50_W0QAS9,UniRef:UniRef90_A0A502LKT2
contig_1	Pyrodigal	gene	1410741	1410911	.	-	.	ID=GCA000012185_01412_gene;locus_tag=GCA000012185_01412
contig_1	Pyrodigal	CDS	1410741	1410911	.	-	0	ID=GCA000012185_01412;Name=hypothetical protein;locus_tag=GCA000012185_01412;product=hypothetical protein;Parent=GCA000012185_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668267.1,SO:0001217,UniParc:UPI00003CD85A,UniRef:UniRef100_A0AAX0YDD4,UniRef:UniRef50_A0AAX0YDD4,UniRef:UniRef90_A0AAX0YDD4
contig_1	Pyrodigal	gene	1410901	1411434	.	-	.	ID=GCA000012185_01413_gene;locus_tag=GCA000012185_01413
contig_1	Pyrodigal	CDS	1410901	1411434	.	-	0	ID=GCA000012185_01413;Name=Phage protein;locus_tag=GCA000012185_01413;product=Phage protein;Parent=GCA000012185_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668266.1,SO:0001217,UniParc:UPI00003CD85B,UniRef:UniRef100_Q4QL00,UniRef:UniRef50_A0A3E1QEM0,UniRef:UniRef90_A0A3E1QEM0
contig_1	Pyrodigal	gene	1411506	1411922	.	-	.	ID=GCA000012185_01414_gene;locus_tag=GCA000012185_01414
contig_1	Pyrodigal	CDS	1411506	1411922	.	-	0	ID=GCA000012185_01414;Name=Phage protein;locus_tag=GCA000012185_01414;product=Phage protein;Parent=GCA000012185_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651292.1,SO:0001217,UniParc:UPI000053E210,UniRef:UniRef100_A0A1Q5Y3E7,UniRef:UniRef50_A0A502LKV1,UniRef:UniRef90_A0A1Q5Y3E7
contig_1	Pyrodigal	gene	1411926	1412573	.	-	.	ID=GCA000012185_01415_gene;locus_tag=GCA000012185_01415
contig_1	Pyrodigal	CDS	1411926	1412573	.	-	0	ID=GCA000012185_01415;Name=hypothetical protein;locus_tag=GCA000012185_01415;product=hypothetical protein;Parent=GCA000012185_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668260.1,SO:0001217,UniParc:UPI00003CD85D,UniRef:UniRef100_Q4QKZ8,UniRef:UniRef50_Q4QKZ8,UniRef:UniRef90_Q4QKZ8
contig_1	Pyrodigal	gene	1412622	1413785	.	-	.	ID=GCA000012185_01416_gene;locus_tag=GCA000012185_01416
contig_1	Pyrodigal	CDS	1412622	1413785	.	-	0	ID=GCA000012185_01416;Name=DNA (cytosine-5-)-methyltransferase;locus_tag=GCA000012185_01416;product=DNA (cytosine-5-)-methyltransferase;Parent=GCA000012185_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272489.1,SO:0001217,UniParc:UPI00003CD85E,UniRef:UniRef100_Q4QKZ7,UniRef:UniRef90_A0A8S5V0Q8
contig_1	Pyrodigal	gene	1413793	1414152	.	-	.	ID=GCA000012185_01417_gene;locus_tag=GCA000012185_01417
contig_1	Pyrodigal	CDS	1413793	1414152	.	-	0	ID=GCA000012185_01417;Name=hypothetical protein;locus_tag=GCA000012185_01417;product=hypothetical protein;Parent=GCA000012185_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054997.1,SO:0001217,UniParc:UPI00015459D8,UniRef:UniRef100_A5UGP0,UniRef:UniRef50_A5UGP0,UniRef:UniRef90_A0A2S9S7M2
contig_1	Pyrodigal	gene	1414149	1414394	.	-	.	ID=GCA000012185_01418_gene;locus_tag=GCA000012185_01418
contig_1	Pyrodigal	CDS	1414149	1414394	.	-	0	ID=GCA000012185_01418;Name=Transposase;locus_tag=GCA000012185_01418;product=Transposase;Parent=GCA000012185_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668254.1,SO:0001217,UniParc:UPI00014FC708,UniRef:UniRef100_A0A1Q5Y3F5,UniRef:UniRef50_A0A1Q5Y3F5,UniRef:UniRef90_A0A1Q5Y3F5
contig_1	Pyrodigal	gene	1414391	1415287	.	-	.	ID=GCA000012185_01419_gene;locus_tag=GCA000012185_01419;gene=rdgC
contig_1	Pyrodigal	CDS	1414391	1415287	.	-	0	ID=GCA000012185_01419;Name=recombination-associated protein RdgC;locus_tag=GCA000012185_01419;product=recombination-associated protein RdgC;Dbxref=GO:0006310;gene=rdgC;Parent=GCA000012185_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2974,COG:L,KEGG:K03554,RefSeq:WP_011272490.1,SO:0001217,UniParc:UPI000053E212,UniRef:UniRef100_Q4QKZ6,UniRef:UniRef50_A5UGN8,UniRef:UniRef90_A5UGN8
contig_1	Pyrodigal	gene	1415412	1416758	.	-	.	ID=GCA000012185_01420_gene;locus_tag=GCA000012185_01420
contig_1	Pyrodigal	CDS	1415412	1416758	.	-	0	ID=GCA000012185_01420;Name=Gp53;locus_tag=GCA000012185_01420;product=Gp53;Parent=GCA000012185_01420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272491.1,SO:0001217,UniParc:UPI000053E213,UniRef:UniRef100_Q4QKZ5,UniRef:UniRef50_A0A763T411,UniRef:UniRef90_Q4QKZ5
contig_1	Pyrodigal	gene	1416820	1417254	.	-	.	ID=GCA000012185_01421_gene;locus_tag=GCA000012185_01421;gene=ssb
contig_1	Pyrodigal	CDS	1416820	1417254	.	-	0	ID=GCA000012185_01421;Name=Single-stranded DNA-binding protein;locus_tag=GCA000012185_01421;product=Single-stranded DNA-binding protein;gene=ssb;Parent=GCA000012185_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_011272492.1,SO:0001217,UniParc:UPI00003CDB23,UniRef:UniRef100_Q4QKZ4,UniRef:UniRef50_Q4QKZ4,UniRef:UniRef90_Q4QKZ4
contig_1	Pyrodigal	gene	1417254	1417904	.	-	.	ID=GCA000012185_01422_gene;locus_tag=GCA000012185_01422;gene=tolB
contig_1	Pyrodigal	CDS	1417254	1417904	.	-	0	ID=GCA000012185_01422;Name=Translocation protein TolB;locus_tag=GCA000012185_01422;product=Translocation protein TolB;gene=tolB;Parent=GCA000012185_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174760.1,SO:0001217,UniParc:UPI00003CDB22,UniRef:UniRef100_Q4QKZ3,UniRef:UniRef50_A0A376BDV0,UniRef:UniRef90_A5UGN5
contig_1	Pyrodigal	gene	1417879	1418799	.	-	.	ID=GCA000012185_01423_gene;locus_tag=GCA000012185_01423;gene=recT
contig_1	Pyrodigal	CDS	1417879	1418799	.	-	0	ID=GCA000012185_01423;Name=Recombinase;locus_tag=GCA000012185_01423;product=Recombinase;gene=recT;Parent=GCA000012185_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3723,COG:L,KEGG:K07455,RefSeq:WP_011272494.1,SO:0001217,UniParc:UPI00003CDB21,UniRef:UniRef100_A0A2S9S1W3,UniRef:UniRef50_U1IB00,UniRef:UniRef90_A5UGN4
contig_1	Pyrodigal	gene	1418812	1419105	.	-	.	ID=GCA000012185_01424_gene;locus_tag=GCA000012185_01424
contig_1	Pyrodigal	CDS	1418812	1419105	.	-	0	ID=GCA000012185_01424;Name=Phage protein;locus_tag=GCA000012185_01424;product=Phage protein;Parent=GCA000012185_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272495.1,SO:0001217,UniParc:UPI000053E215,UniRef:UniRef100_Q4QKZ1,UniRef:UniRef50_A0A2X4RM95,UniRef:UniRef90_A0A2X4RM95
contig_1	Pyrodigal	gene	1419102	1419446	.	-	.	ID=GCA000012185_01425_gene;locus_tag=GCA000012185_01425
contig_1	Pyrodigal	CDS	1419102	1419446	.	-	0	ID=GCA000012185_01425;Name=Full;locus_tag=GCA000012185_01425;product=Full;Parent=GCA000012185_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272496.1,SO:0001217,UniParc:UPI00003CDC88,UniRef:UniRef100_Q4QKZ0,UniRef:UniRef50_Q4QKZ0,UniRef:UniRef90_Q4QKZ0
contig_1	Pyrodigal	gene	1419460	1420197	.	-	.	ID=GCA000012185_01426_gene;locus_tag=GCA000012185_01426
contig_1	Pyrodigal	CDS	1419460	1420197	.	-	0	ID=GCA000012185_01426;Name=Methyltransferase;locus_tag=GCA000012185_01426;product=Methyltransferase;Parent=GCA000012185_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651093.1,SO:0001217,UniParc:UPI000053E216,UniRef:UniRef100_A0A0Y7I8Q8,UniRef:UniRef50_A0A1V5LEH5,UniRef:UniRef90_A5UGN1
contig_1	Pyrodigal	gene	1420288	1421319	.	-	.	ID=GCA000012185_01427_gene;locus_tag=GCA000012185_01427
contig_1	Pyrodigal	CDS	1420288	1421319	.	-	0	ID=GCA000012185_01427;Name=Endonuclease;locus_tag=GCA000012185_01427;product=Endonuclease;Parent=GCA000012185_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272497.1,SO:0001217,UniParc:UPI000053E217,UniRef:UniRef100_Q4QKY8,UniRef:UniRef50_Q4QKY8,UniRef:UniRef90_Q4QKY8
contig_1	Pyrodigal	gene	1421309	1421560	.	-	.	ID=GCA000012185_01428_gene;locus_tag=GCA000012185_01428
contig_1	Pyrodigal	CDS	1421309	1421560	.	-	0	ID=GCA000012185_01428;Name=Phage protein;locus_tag=GCA000012185_01428;product=Phage protein;Parent=GCA000012185_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688811.1,SO:0001217,UniParc:UPI000053E218,UniRef:UniRef100_A0A0D0INI5,UniRef:UniRef50_A0A0F5EUW1,UniRef:UniRef90_A0A0D0INI5
contig_1	Pyrodigal	gene	1421679	1421990	.	-	.	ID=GCA000012185_01429_gene;locus_tag=GCA000012185_01429
contig_1	Pyrodigal	CDS	1421679	1421990	.	-	0	ID=GCA000012185_01429;Name=hypothetical protein;locus_tag=GCA000012185_01429;product=hypothetical protein;Parent=GCA000012185_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651098.1,SO:0001217,UniParc:UPI00003CDC67,UniRef:UniRef100_A0A0D0H1V7,UniRef:UniRef50_A0A0D0H1V7,UniRef:UniRef90_A0A0D0H1V7
contig_1	Pyrodigal	gene	1422376	1422561	.	-	.	ID=GCA000012185_01430_gene;locus_tag=GCA000012185_01430
contig_1	Pyrodigal	CDS	1422376	1422561	.	-	0	ID=GCA000012185_01430;Name=hypothetical protein;locus_tag=GCA000012185_01430;product=hypothetical protein;Parent=GCA000012185_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651099.1,SO:0001217,UniParc:UPI000053E219,UniRef:UniRef100_A0A1Q5Y409,UniRef:UniRef50_A0A1Q5Y409,UniRef:UniRef90_A0A1Q5Y409
contig_1	Pyrodigal	gene	1422722	1423870	.	-	.	ID=GCA000012185_01431_gene;locus_tag=GCA000012185_01431
contig_1	Pyrodigal	CDS	1422722	1423870	.	-	0	ID=GCA000012185_01431;Name=type I site-specific deoxyribonuclease;locus_tag=GCA000012185_01431;product=type I site-specific deoxyribonuclease;Parent=GCA000012185_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07504,RefSeq:WP_005651101.1,SO:0001217,UniParc:UPI000053E21A,UniRef:UniRef100_A5UGM6,UniRef:UniRef50_A0A077P0C6,UniRef:UniRef90_A5UGM6
contig_1	Pyrodigal	gene	1423881	1424681	.	-	.	ID=GCA000012185_01432_gene;locus_tag=GCA000012185_01432
contig_1	Pyrodigal	CDS	1423881	1424681	.	-	0	ID=GCA000012185_01432;Name=tRNA_anti-like;locus_tag=GCA000012185_01432;product=tRNA_anti-like;Parent=GCA000012185_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005692606.1,SO:0001217,UniParc:UPI0001545D00,UniRef:UniRef100_Q4QKY3,UniRef:UniRef50_Q4QKY3,UniRef:UniRef90_Q4QKY3
contig_1	Pyrodigal	gene	1424804	1425169	.	-	.	ID=GCA000012185_01433_gene;locus_tag=GCA000012185_01433;gene=rpoE
contig_1	Pyrodigal	CDS	1424804	1425169	.	-	0	ID=GCA000012185_01433;Name=RNA polymerase sigma factor;locus_tag=GCA000012185_01433;product=RNA polymerase sigma factor;gene=rpoE;Parent=GCA000012185_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_011272499.1,SO:0001217,UniParc:UPI000053E21C,UniRef:UniRef100_A0AAX0YCY1,UniRef:UniRef50_A5UGM4,UniRef:UniRef90_A5UGM4
contig_1	Pyrodigal	gene	1425171	1425758	.	-	.	ID=GCA000012185_01434_gene;locus_tag=GCA000012185_01434;gene=ninG
contig_1	Pyrodigal	CDS	1425171	1425758	.	-	0	ID=GCA000012185_01434;Name=Bacteriophage Lambda NinG protein;locus_tag=GCA000012185_01434;product=Bacteriophage Lambda NinG protein;gene=ninG;Parent=GCA000012185_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272500.1,SO:0001217,UniParc:UPI000053E21D,UniRef:UniRef100_A0AAX0Y9Z4,UniRef:UniRef50_A0A2Z4PZP4,UniRef:UniRef90_A5UGM3
contig_1	Pyrodigal	gene	1425758	1425847	.	-	.	ID=GCA000012185_01435_gene;locus_tag=GCA000012185_01435
contig_1	Pyrodigal	CDS	1425758	1425847	.	-	0	ID=GCA000012185_01435;Name=hypothetical protein;locus_tag=GCA000012185_01435;product=hypothetical protein;Parent=GCA000012185_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000AEAAB9D,UniRef:UniRef100_A0AAX0Y8A2,UniRef:UniRef50_A5UGM2,UniRef:UniRef90_A0A2S9RQQ7
contig_1	Pyrodigal	gene	1426130	1426558	.	+	.	ID=GCA000012185_01436_gene;locus_tag=GCA000012185_01436
contig_1	Pyrodigal	CDS	1426130	1426558	.	+	0	ID=GCA000012185_01436;Name=HicB-like antitoxin of toxin-antitoxin system domain-containing protein;locus_tag=GCA000012185_01436;product=HicB-like antitoxin of toxin-antitoxin system domain-containing protein;Parent=GCA000012185_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005692602.1,SO:0001217,UniParc:UPI000053E21F,UniRef:UniRef100_A0AAX0Y7E9,UniRef:UniRef50_U1H3Y1,UniRef:UniRef90_A4P0J9
contig_1	Pyrodigal	gene	1426559	1427068	.	-	.	ID=GCA000012185_01437_gene;locus_tag=GCA000012185_01437
contig_1	Pyrodigal	CDS	1426559	1427068	.	-	0	ID=GCA000012185_01437;Name=DUF1367 domain-containing protein;locus_tag=GCA000012185_01437;product=DUF1367 domain-containing protein;Parent=GCA000012185_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005692600.1,SO:0001217,UniParc:UPI00003CDCE5,UniRef:UniRef100_A0AAX0Y793,UniRef:UniRef50_W0QDW0,UniRef:UniRef90_A0A1B8QRC7
contig_1	Pyrodigal	gene	1427073	1427663	.	-	.	ID=GCA000012185_01438_gene;locus_tag=GCA000012185_01438
contig_1	Pyrodigal	CDS	1427073	1427663	.	-	0	ID=GCA000012185_01438;Name=Adenine methyltransferase;locus_tag=GCA000012185_01438;product=Adenine methyltransferase;Parent=GCA000012185_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272501.1,SO:0001217,UniParc:UPI000053E220,UniRef:UniRef100_A0AAX0YC68,UniRef:UniRef50_Q0I4I3,UniRef:UniRef90_A0A0M1GR17
contig_1	Pyrodigal	gene	1427660	1428295	.	-	.	ID=GCA000012185_01439_gene;locus_tag=GCA000012185_01439
contig_1	Pyrodigal	CDS	1427660	1428295	.	-	0	ID=GCA000012185_01439;Name=Replication P;locus_tag=GCA000012185_01439;product=Replication P;Parent=GCA000012185_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272502.1,SO:0001217,UniParc:UPI000053E221,UniRef:UniRef100_Q4QKX6,UniRef:UniRef50_Q4QKD4,UniRef:UniRef90_Q4QKD4
contig_1	Pyrodigal	gene	1428280	1429110	.	-	.	ID=GCA000012185_01440_gene;locus_tag=GCA000012185_01440
contig_1	Pyrodigal	CDS	1428280	1429110	.	-	0	ID=GCA000012185_01440;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000012185_01440;product=Helix-turn-helix domain-containing protein;Parent=GCA000012185_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4QKX5,UniRef:UniRef90_Q4QKX5
contig_1	Pyrodigal	gene	1429064	1429297	.	-	.	ID=GCA000012185_01441_gene;locus_tag=GCA000012185_01441
contig_1	Pyrodigal	CDS	1429064	1429297	.	-	0	ID=GCA000012185_01441;Name=Winged helix-turn-helix domain-containing protein;locus_tag=GCA000012185_01441;product=Winged helix-turn-helix domain-containing protein;Parent=GCA000012185_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651121.1,SO:0001217,UniParc:UPI00003CDBB1,UniRef:UniRef100_A0A1Q5Y3H3,UniRef:UniRef50_A0A1V3TUY8,UniRef:UniRef90_A0A1Q5Y3H3
contig_1	Pyrodigal	gene	1429343	1429795	.	-	.	ID=GCA000012185_01442_gene;locus_tag=GCA000012185_01442
contig_1	Pyrodigal	CDS	1429343	1429795	.	-	0	ID=GCA000012185_01442;Name=Phage regulatory protein CII (CP76);locus_tag=GCA000012185_01442;product=Phage regulatory protein CII (CP76);Parent=GCA000012185_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651123.1,SO:0001217,UniParc:UPI00003CDBB0,UniRef:UniRef100_A0A1Q5Y424,UniRef:UniRef50_A0A1Q5Y424,UniRef:UniRef90_A0A1Q5Y424
contig_1	Pyrodigal	gene	1430179	1431147	.	+	.	ID=GCA000012185_01443_gene;locus_tag=GCA000012185_01443
contig_1	Pyrodigal	CDS	1430179	1431147	.	+	0	ID=GCA000012185_01443;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000012185_01443;product=HTH cro/C1-type domain-containing protein;Parent=GCA000012185_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272504.1,SO:0001217,UniParc:UPI000053E223,UniRef:UniRef100_A0AAX0YES7,UniRef:UniRef50_A0AAV2U3C6,UniRef:UniRef90_A0AAV2U3C6
contig_1	Pyrodigal	gene	1431341	1431667	.	+	.	ID=GCA000012185_01444_gene;locus_tag=GCA000012185_01444
contig_1	Pyrodigal	CDS	1431341	1431667	.	+	0	ID=GCA000012185_01444;Name=holin;locus_tag=GCA000012185_01444;product=holin;Parent=GCA000012185_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651127.1,SO:0001217,UniParc:UPI00003CD991,UniRef:UniRef100_A0AAX0YC13,UniRef:UniRef50_A0A1B3JK35,UniRef:UniRef90_A0AAX0YC13
contig_1	Pyrodigal	gene	1431654	1432058	.	+	.	ID=GCA000012185_01445_gene;locus_tag=GCA000012185_01445
contig_1	Pyrodigal	CDS	1431654	1432058	.	+	0	ID=GCA000012185_01445;Name=Peptidase M15C domain-containing protein;locus_tag=GCA000012185_01445;product=Peptidase M15C domain-containing protein;Parent=GCA000012185_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272505.1,SO:0001217,UniParc:UPI00003CD990,UniRef:UniRef100_A0AAX0YCT1,UniRef:UniRef50_F4H965,UniRef:UniRef90_A5UGL4
contig_1	Pyrodigal	gene	1432055	1432444	.	+	.	ID=GCA000012185_01446_gene;locus_tag=GCA000012185_01446
contig_1	Pyrodigal	CDS	1432055	1432444	.	+	0	ID=GCA000012185_01446;Name=DUF2570 domain-containing protein;locus_tag=GCA000012185_01446;product=DUF2570 domain-containing protein;Parent=GCA000012185_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272506.1,SO:0001217,UniParc:UPI00003CD98F,UniRef:UniRef100_A0AAX0YE04,UniRef:UniRef50_A5UGL3,UniRef:UniRef90_A5UGL3
contig_1	Pyrodigal	gene	1432658	1433617	.	+	.	ID=GCA000012185_01447_gene;locus_tag=GCA000012185_01447
contig_1	Pyrodigal	CDS	1432658	1433617	.	+	0	ID=GCA000012185_01447;Name=Methyltransferase;locus_tag=GCA000012185_01447;product=Methyltransferase;Parent=GCA000012185_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272508.1,SO:0001217,UniParc:UPI00003CD98E,UniRef:UniRef100_Q4QKW6,UniRef:UniRef50_Q4QKW6,UniRef:UniRef90_Q4QKW6
contig_1	Pyrodigal	gene	1433653	1434015	.	+	.	ID=GCA000012185_01448_gene;locus_tag=GCA000012185_01448
contig_1	Pyrodigal	CDS	1433653	1434015	.	+	0	ID=GCA000012185_01448;Name=ParB/Sulfiredoxin domain-containing protein;locus_tag=GCA000012185_01448;product=ParB/Sulfiredoxin domain-containing protein;Parent=GCA000012185_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_228369068.1,SO:0001217,UniParc:UPI00003CD98D,UniRef:UniRef100_UPI001F2E078E,UniRef:UniRef50_A0A2N9Y3J7,UniRef:UniRef90_A5UGL1
contig_1	Pyrodigal	gene	1434012	1434233	.	-	.	ID=GCA000012185_01449_gene;locus_tag=GCA000012185_01449
contig_1	Pyrodigal	CDS	1434012	1434233	.	-	0	ID=GCA000012185_01449;Name=hypothetical protein;locus_tag=GCA000012185_01449;product=hypothetical protein;Parent=GCA000012185_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005692583.1,SO:0001217,UniParc:UPI00003CD98C,UniRef:UniRef100_A0AAX0YBY1,UniRef:UniRef50_A5UGL0,UniRef:UniRef90_A5UGL0
contig_1	Pyrodigal	gene	1434291	1434659	.	+	.	ID=GCA000012185_01450_gene;locus_tag=GCA000012185_01450
contig_1	Pyrodigal	CDS	1434291	1434659	.	+	0	ID=GCA000012185_01450;Name=Homeodomain phBC6A51-type domain-containing protein;locus_tag=GCA000012185_01450;product=Homeodomain phBC6A51-type domain-containing protein;Parent=GCA000012185_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651145.1,SO:0001217,UniParc:UPI000053E226,UniRef:UniRef100_A5UGK9,UniRef:UniRef50_A5UGK9,UniRef:UniRef90_A5UGK9
contig_1	Pyrodigal	gene	1434640	1435989	.	+	.	ID=GCA000012185_01451_gene;locus_tag=GCA000012185_01451
contig_1	Pyrodigal	CDS	1434640	1435989	.	+	0	ID=GCA000012185_01451;Name=PBSX family phage terminase large subunit;locus_tag=GCA000012185_01451;product=PBSX family phage terminase large subunit;Parent=GCA000012185_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06909,RefSeq:WP_041174761.1,SO:0001217,UniParc:UPI00059B173F,UniRef:UniRef100_A0AAX0YCW0,UniRef:UniRef50_P44184,UniRef:UniRef90_A5UGK8
contig_1	Pyrodigal	gene	1435991	1437307	.	+	.	ID=GCA000012185_01452_gene;locus_tag=GCA000012185_01452
contig_1	Pyrodigal	CDS	1435991	1437307	.	+	0	ID=GCA000012185_01452;Name=DUF1073 domain-containing protein;locus_tag=GCA000012185_01452;product=DUF1073 domain-containing protein;Parent=GCA000012185_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3567,COG:S,RefSeq:WP_005688879.1,SO:0001217,UniParc:UPI00003CD89A,UniRef:UniRef100_A0AAQ0IF26,UniRef:UniRef50_A5UGK7,UniRef:UniRef90_A5UGK7
contig_1	Pyrodigal	gene	1437246	1438049	.	+	.	ID=GCA000012185_01453_gene;locus_tag=GCA000012185_01453
contig_1	Pyrodigal	CDS	1437246	1438049	.	+	0	ID=GCA000012185_01453;Name=putative protein%2C-like protein of phage Mu protein gp30;locus_tag=GCA000012185_01453;product=putative protein%2C-like protein of phage Mu protein gp30;Parent=GCA000012185_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000D42E759,UniRef:UniRef100_Q4QKW0,UniRef:UniRef50_Q4QKW0,UniRef:UniRef90_Q4QKW0
contig_1	Pyrodigal	gene	1438055	1439128	.	+	.	ID=GCA000012185_01454_gene;locus_tag=GCA000012185_01454
contig_1	Pyrodigal	CDS	1438055	1439128	.	+	0	ID=GCA000012185_01454;Name=DUF2213 domain-containing protein;locus_tag=GCA000012185_01454;product=DUF2213 domain-containing protein;Parent=GCA000012185_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3566,COG:S,KEGG:K09960,RefSeq:WP_011272512.1,SO:0001217,UniParc:UPI00003CD898,UniRef:UniRef100_Q4QKV9,UniRef:UniRef50_Q4QKV9,UniRef:UniRef90_Q4QKV9
contig_1	Pyrodigal	gene	1439142	1439561	.	+	.	ID=GCA000012185_01455_gene;locus_tag=GCA000012185_01455
contig_1	Pyrodigal	CDS	1439142	1439561	.	+	0	ID=GCA000012185_01455;Name=DUF2190 domain-containing protein;locus_tag=GCA000012185_01455;product=DUF2190 domain-containing protein;Parent=GCA000012185_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005643361.1,SO:0001217,UniParc:UPI00003CD897,UniRef:UniRef100_A5UGK4,UniRef:UniRef50_A0A1A7NVF8,UniRef:UniRef90_A5UGK4
contig_1	Pyrodigal	gene	1439623	1440570	.	+	.	ID=GCA000012185_01456_gene;locus_tag=GCA000012185_01456
contig_1	Pyrodigal	CDS	1439623	1440570	.	+	0	ID=GCA000012185_01456;Name=DUF2184 domain-containing protein;locus_tag=GCA000012185_01456;product=DUF2184 domain-containing protein;Parent=GCA000012185_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4834,COG:S,SO:0001217,UniRef:UniRef50_Q4QKV7,UniRef:UniRef90_Q4QKV7
contig_1	Pyrodigal	gene	1440573	1440761	.	+	.	ID=GCA000012185_01457_gene;locus_tag=GCA000012185_01457
contig_1	Pyrodigal	CDS	1440573	1440761	.	+	0	ID=GCA000012185_01457;Name=Mu-like prophage FluMu N-terminal domain-containing protein;locus_tag=GCA000012185_01457;product=Mu-like prophage FluMu N-terminal domain-containing protein;Parent=GCA000012185_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688887.1,SO:0001217,UniParc:UPI00003CD895,UniRef:UniRef100_Q4QKV6,UniRef:UniRef50_A0A1A7NRY4,UniRef:UniRef90_Q4QKV6
contig_1	Pyrodigal	gene	1440765	1441115	.	+	.	ID=GCA000012185_01458_gene;locus_tag=GCA000012185_01458
contig_1	Pyrodigal	CDS	1440765	1441115	.	+	0	ID=GCA000012185_01458;Name=DUF4054 domain-containing protein;locus_tag=GCA000012185_01458;product=DUF4054 domain-containing protein;Parent=GCA000012185_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651158.1,SO:0001217,UniParc:UPI000053E22A,UniRef:UniRef100_Q4QKV5,UniRef:UniRef50_Q4QKV5,UniRef:UniRef90_Q4QKV5
contig_1	Pyrodigal	gene	1441108	1441566	.	+	.	ID=GCA000012185_01459_gene;locus_tag=GCA000012185_01459
contig_1	Pyrodigal	CDS	1441108	1441566	.	+	0	ID=GCA000012185_01459;Name=Mu-like prophage protein gpG;locus_tag=GCA000012185_01459;product=Mu-like prophage protein gpG;Parent=GCA000012185_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272514.1,SO:0001217,UniParc:UPI00003CDD0A,UniRef:UniRef100_Q4QKV4,UniRef:UniRef50_Q4QKV4,UniRef:UniRef90_Q4QKV4
contig_1	Pyrodigal	gene	1441566	1441925	.	+	.	ID=GCA000012185_01460_gene;locus_tag=GCA000012185_01460
contig_1	Pyrodigal	CDS	1441566	1441925	.	+	0	ID=GCA000012185_01460;Name=head protein;locus_tag=GCA000012185_01460;product=head protein;Parent=GCA000012185_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272515.1,SO:0001217,UniParc:UPI00003CDD09,UniRef:UniRef100_Q4QKV3,UniRef:UniRef50_A0A0F5ESG2,UniRef:UniRef90_Q4QKV3
contig_1	Pyrodigal	gene	1441927	1442436	.	+	.	ID=GCA000012185_01461_gene;locus_tag=GCA000012185_01461
contig_1	Pyrodigal	CDS	1441927	1442436	.	+	0	ID=GCA000012185_01461;Name=tail terminator;locus_tag=GCA000012185_01461;product=tail terminator;Parent=GCA000012185_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651165.1,SO:0001217,UniParc:UPI000053E22B,UniRef:UniRef100_A0AAP8SDF7,UniRef:UniRef50_A0A1A7NTJ7,UniRef:UniRef90_A0AAP8SDF7
contig_1	Pyrodigal	gene	1442423	1443496	.	+	.	ID=GCA000012185_01462_gene;locus_tag=GCA000012185_01462
contig_1	Pyrodigal	CDS	1442423	1443496	.	+	0	ID=GCA000012185_01462;Name=DUF3383 domain-containing protein;locus_tag=GCA000012185_01462;product=DUF3383 domain-containing protein;Parent=GCA000012185_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272516.1,SO:0001217,UniParc:UPI000053E22C,UniRef:UniRef100_Q4QKV1,UniRef:UniRef50_C4GFV9,UniRef:UniRef90_Q4QKV1
contig_1	Pyrodigal	gene	1443542	1443967	.	+	.	ID=GCA000012185_01463_gene;locus_tag=GCA000012185_01463
contig_1	Pyrodigal	CDS	1443542	1443967	.	+	0	ID=GCA000012185_01463;Name=DUF3277 domain-containing protein;locus_tag=GCA000012185_01463;product=DUF3277 domain-containing protein;Parent=GCA000012185_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272517.1,SO:0001217,UniParc:UPI000053E22D,UniRef:UniRef100_Q4QKV0,UniRef:UniRef50_A0A1A7NTZ6,UniRef:UniRef90_Q4QKV0
contig_1	Pyrodigal	gene	1443967	1444449	.	+	.	ID=GCA000012185_01464_gene;locus_tag=GCA000012185_01464
contig_1	Pyrodigal	CDS	1443967	1444449	.	+	0	ID=GCA000012185_01464;Name=tail assembly chaperone;locus_tag=GCA000012185_01464;product=tail assembly chaperone;Parent=GCA000012185_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005643342.1,SO:0001217,UniParc:UPI00003CDA8F,UniRef:UniRef100_A0AAP8V5E9,UniRef:UniRef50_A0A0A3A2W9,UniRef:UniRef90_A5UGJ5
contig_1	Pyrodigal	gene	1444485	1444637	.	+	.	ID=GCA000012185_01465_gene;locus_tag=GCA000012185_01465
contig_1	Pyrodigal	CDS	1444485	1444637	.	+	0	ID=GCA000012185_01465;Name=Phage protein;locus_tag=GCA000012185_01465;product=Phage protein;Parent=GCA000012185_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005643340.1,SO:0001217,UniParc:UPI00003CDA90,UniRef:UniRef100_A0A2S9RHP2,UniRef:UniRef50_A0A7H1C5J9,UniRef:UniRef90_A0A2S9RHP2
contig_1	Pyrodigal	gene	1444634	1447051	.	+	.	ID=GCA000012185_01466_gene;locus_tag=GCA000012185_01466;gene=hI1514
contig_1	Pyrodigal	CDS	1444634	1447051	.	+	0	ID=GCA000012185_01466;Name=Tape measure protein N-terminal domain-containing protein;locus_tag=GCA000012185_01466;product=Tape measure protein N-terminal domain-containing protein;gene=hI1514;Parent=GCA000012185_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3941,COG:X,RefSeq:WP_011272518.1,SO:0001217,UniParc:UPI000053E22E,UniRef:UniRef100_Q4QKU7,UniRef:UniRef50_A5UGJ3,UniRef:UniRef90_A5UGJ3
contig_1	Pyrodigal	gene	1447126	1447698	.	-	.	ID=GCA000012185_01467_gene;locus_tag=GCA000012185_01467
contig_1	Pyrodigal	CDS	1447126	1447698	.	-	0	ID=GCA000012185_01467;Name=KilA-N domain-containing protein;locus_tag=GCA000012185_01467;product=KilA-N domain-containing protein;Parent=GCA000012185_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272519.1,SO:0001217,UniParc:UPI00003CDB57,UniRef:UniRef100_Q4QKU6,UniRef:UniRef50_Q4QKU6,UniRef:UniRef90_Q4QKU6
contig_1	Infernal	gene	1447735	1447819	.	-	.	ID=GCA000012185_01468_gene;locus_tag=GCA000012185_01468;gene=sRNA-Xcc1
contig_1	Infernal	ncRNA	1447735	1447819	3.2e-10	-	.	ID=GCA000012185_01468;Name=sRNA-Xcc1;locus_tag=GCA000012185_01468;product=sRNA-Xcc1;Dbxref=RFAM:RF02221;Parent=GCA000012185_01468_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02221
contig_1	Pyrodigal	gene	1448006	1448587	.	+	.	ID=GCA000012185_01469_gene;locus_tag=GCA000012185_01469
contig_1	Pyrodigal	CDS	1448006	1448587	.	+	0	ID=GCA000012185_01469;Name=Dit-like phage tail protein N-terminal domain-containing protein;locus_tag=GCA000012185_01469;product=Dit-like phage tail protein N-terminal domain-containing protein;Parent=GCA000012185_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272520.1,SO:0001217,UniParc:UPI000053E22F,UniRef:UniRef100_Q4QKU5,UniRef:UniRef50_A0A0F5EPQ5,UniRef:UniRef90_Q4QKU5
contig_1	Pyrodigal	gene	1448584	1448898	.	+	.	ID=GCA000012185_01470_gene;locus_tag=GCA000012185_01470
contig_1	Pyrodigal	CDS	1448584	1448898	.	+	0	ID=GCA000012185_01470;Name=Cyanophage baseplate Pam3 plug gp18 domain-containing protein;locus_tag=GCA000012185_01470;product=Cyanophage baseplate Pam3 plug gp18 domain-containing protein;Parent=GCA000012185_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005643334.1,SO:0001217,UniParc:UPI000053E230,UniRef:UniRef100_A0A0Y7M0S2,UniRef:UniRef50_A0A0F5EU53,UniRef:UniRef90_A0A0Y7M0S2
contig_1	Pyrodigal	gene	1448895	1449851	.	+	.	ID=GCA000012185_01471_gene;locus_tag=GCA000012185_01471
contig_1	Pyrodigal	CDS	1448895	1449851	.	+	0	ID=GCA000012185_01471;Name=baseplate hub;locus_tag=GCA000012185_01471;product=baseplate hub;Parent=GCA000012185_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272521.1,SO:0001217,UniParc:UPI000053E231,UniRef:UniRef100_Q4QKU3,UniRef:UniRef50_A0A7H1C5G3,UniRef:UniRef90_Q4QKU3
contig_1	Pyrodigal	gene	1449854	1450525	.	+	.	ID=GCA000012185_01472_gene;locus_tag=GCA000012185_01472
contig_1	Pyrodigal	CDS	1449854	1450525	.	+	0	ID=GCA000012185_01472;Name=Phage protein Gp138 N-terminal domain-containing protein;locus_tag=GCA000012185_01472;product=Phage protein Gp138 N-terminal domain-containing protein;Parent=GCA000012185_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272522.1,SO:0001217,UniParc:UPI00003CDBFC,UniRef:UniRef100_Q4QKU2,UniRef:UniRef50_Q4QKU2,UniRef:UniRef90_Q4QKU2
contig_1	Pyrodigal	gene	1450522	1450887	.	+	.	ID=GCA000012185_01473_gene;locus_tag=GCA000012185_01473
contig_1	Pyrodigal	CDS	1450522	1450887	.	+	0	ID=GCA000012185_01473;Name=Phage protein;locus_tag=GCA000012185_01473;product=Phage protein;Parent=GCA000012185_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272523.1,SO:0001217,UniParc:UPI000053E232,UniRef:UniRef100_A0AAX0YCD1,UniRef:UniRef50_A0A1A7NTI8,UniRef:UniRef90_A5UGI8
contig_1	Pyrodigal	gene	1450880	1452316	.	+	.	ID=GCA000012185_01474_gene;locus_tag=GCA000012185_01474;gene=jayE
contig_1	Pyrodigal	CDS	1450880	1452316	.	+	0	ID=GCA000012185_01474;Name=Baseplate protein J-like domain-containing protein;locus_tag=GCA000012185_01474;product=Baseplate protein J-like domain-containing protein;gene=jayE;Parent=GCA000012185_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3299,COG:X,RefSeq:WP_011272524.1,SO:0001217,UniParc:UPI00003CDA92,UniRef:UniRef100_A0AAX0YBZ9,UniRef:UniRef50_A5UGI7,UniRef:UniRef90_A5UGI7
contig_1	Pyrodigal	gene	1452325	1452939	.	+	.	ID=GCA000012185_01475_gene;locus_tag=GCA000012185_01475
contig_1	Pyrodigal	CDS	1452325	1452939	.	+	0	ID=GCA000012185_01475;Name=DUF2612 domain-containing protein;locus_tag=GCA000012185_01475;product=DUF2612 domain-containing protein;Parent=GCA000012185_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272525.1,SO:0001217,UniParc:UPI00003CDA93,UniRef:UniRef100_A0AAX0YBW8,UniRef:UniRef50_A5UGI6,UniRef:UniRef90_A5UGI6
contig_1	Pyrodigal	gene	1452949	1455297	.	+	.	ID=GCA000012185_01476_gene;locus_tag=GCA000012185_01476
contig_1	Pyrodigal	CDS	1452949	1455297	.	+	0	ID=GCA000012185_01476;Name=putative tail fiber protein;locus_tag=GCA000012185_01476;product=putative tail fiber protein;Parent=GCA000012185_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272526.1,SO:0001217,UniParc:UPI000053E233,UniRef:UniRef100_Q4QKT8,UniRef:UniRef50_P51735,UniRef:UniRef90_Q4QKT8
contig_1	Pyrodigal	gene	1455309	1455911	.	+	.	ID=GCA000012185_01477_gene;locus_tag=GCA000012185_01477
contig_1	Pyrodigal	CDS	1455309	1455911	.	+	0	ID=GCA000012185_01477;Name=putative protein in lys 3'region;locus_tag=GCA000012185_01477;product=putative protein in lys 3'region;Parent=GCA000012185_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005661624.1,SO:0001217,UniParc:UPI00003CD766,UniRef:UniRef100_A0A2S9RX93,UniRef:UniRef50_P51736,UniRef:UniRef90_P51736
contig_1	Pyrodigal	gene	1455908	1456408	.	+	.	ID=GCA000012185_01478_gene;locus_tag=GCA000012185_01478
contig_1	Pyrodigal	CDS	1455908	1456408	.	+	0	ID=GCA000012185_01478;Name=Enoyl-CoA hydratase;locus_tag=GCA000012185_01478;product=Enoyl-CoA hydratase;Parent=GCA000012185_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272527.1,SO:0001217,UniParc:UPI00003CD767,UniRef:UniRef100_Q4QKT6,UniRef:UniRef50_I3DC15,UniRef:UniRef90_Q4QKT6
contig_1	Pyrodigal	gene	1456962	1457225	.	-	.	ID=GCA000012185_01479_gene;locus_tag=GCA000012185_01479
contig_1	Pyrodigal	CDS	1456962	1457225	.	-	0	ID=GCA000012185_01479;Name=hypothetical protein;locus_tag=GCA000012185_01479;product=hypothetical protein;Parent=GCA000012185_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272529.1,SO:0001217,UniParc:UPI00003CD769,UniRef:UniRef100_A0AAX0YE14,UniRef:UniRef50_C5S4W0,UniRef:UniRef90_A0A2S9S6E2
contig_1	Pyrodigal	gene	1457847	1458164	.	+	.	ID=GCA000012185_01480_gene;locus_tag=GCA000012185_01480
contig_1	Pyrodigal	CDS	1457847	1458164	.	+	0	ID=GCA000012185_01480;Name=Pyruvate kinase;locus_tag=GCA000012185_01480;product=Pyruvate kinase;Parent=GCA000012185_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_038441298.1,SO:0001217,UniParc:UPI00003CD76A,UniRef:UniRef100_A0A2V0S3B3,UniRef:UniRef50_A0A158SXI5,UniRef:UniRef90_A4N4G6
contig_1	Pyrodigal	gene	1458248	1458946	.	+	.	ID=GCA000012185_01481_gene;locus_tag=GCA000012185_01481;gene=fimB
contig_1	Pyrodigal	CDS	1458248	1458946	.	+	0	ID=GCA000012185_01481;Name=Site-specific integrase;locus_tag=GCA000012185_01481;product=Site-specific integrase;gene=fimB;Parent=GCA000012185_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0582,COG:LX,RefSeq:WP_041174762.1,SO:0001217,UniParc:UPI00003CD76B,UniRef:UniRef100_A0AAJ8WCZ2,UniRef:UniRef50_A0AAJ8WCZ2,UniRef:UniRef90_A0AAJ8WCZ2
contig_1	Pyrodigal	gene	1459009	1459290	.	-	.	ID=GCA000012185_01482_gene;locus_tag=GCA000012185_01482
contig_1	Pyrodigal	CDS	1459009	1459290	.	-	0	ID=GCA000012185_01482;Name=Pyruvate kinase;locus_tag=GCA000012185_01482;product=Pyruvate kinase;Parent=GCA000012185_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000019B326,UniRef:UniRef100_A0AAJ8WRY1,UniRef:UniRef50_A0AAJ8WRY1,UniRef:UniRef90_A0AAJ8WRY1
contig_1	Pyrodigal	gene	1459535	1460251	.	+	.	ID=GCA000012185_01483_gene;locus_tag=GCA000012185_01483
contig_1	Pyrodigal	CDS	1459535	1460251	.	+	0	ID=GCA000012185_01483;Name=Phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease 3 domain-containing protein;locus_tag=GCA000012185_01483;product=Phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease 3 domain-containing protein;Parent=GCA000012185_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174764.1,SO:0001217,UniParc:UPI00003CD76D,UniRef:UniRef100_A0A2S9S9G6,UniRef:UniRef50_A0A2S9S9G6,UniRef:UniRef90_A0A2S9S9G6
contig_1	Pyrodigal	gene	1460532	1461068	.	+	.	ID=GCA000012185_01484_gene;locus_tag=GCA000012185_01484;gene=epmC
contig_1	Pyrodigal	CDS	1460532	1461068	.	+	0	ID=GCA000012185_01484;Name=Elongation factor P hydroxylase;locus_tag=GCA000012185_01484;product=Elongation factor P hydroxylase;Dbxref=GO:0004497;gene=epmC;Parent=GCA000012185_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3101,COG:J,KEGG:K09906,RefSeq:WP_005651005.1,SO:0001217,UniParc:UPI000039ABA6,UniRef:UniRef100_A0A2S9S9G0,UniRef:UniRef50_P44255,UniRef:UniRef90_P44255;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	1461269	1461715	.	+	.	ID=GCA000012185_01485_gene;locus_tag=GCA000012185_01485;gene=tPR
contig_1	Pyrodigal	CDS	1461269	1461715	.	+	0	ID=GCA000012185_01485;Name=Sel1 repeat family protein;locus_tag=GCA000012185_01485;product=Sel1 repeat family protein;gene=tPR;Parent=GCA000012185_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0790,COG:R,RefSeq:WP_011272533.1,SO:0001217,UniParc:UPI0000052A43,UniRef:UniRef100_A0A2S9S9K4,UniRef:UniRef50_A0A2S9S9K4,UniRef:UniRef90_A0A2S9S9K4
contig_1	Pyrodigal	gene	1461715	1461891	.	+	.	ID=GCA000012185_01486_gene;locus_tag=GCA000012185_01486
contig_1	Pyrodigal	CDS	1461715	1461891	.	+	0	ID=GCA000012185_01486;Name=hypothetical protein;locus_tag=GCA000012185_01486;product=hypothetical protein;Parent=GCA000012185_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668661.1,SO:0001217,UniParc:UPI0000052A44,UniRef:UniRef100_A0AB34I8J7,UniRef:UniRef50_A0AB34I8J7,UniRef:UniRef90_A0AB34I8J7
contig_1	Pyrodigal	gene	1461903	1462562	.	+	.	ID=GCA000012185_01487_gene;locus_tag=GCA000012185_01487;gene=tPR
contig_1	Pyrodigal	CDS	1461903	1462562	.	+	0	ID=GCA000012185_01487;Name=Beta-lactamase;locus_tag=GCA000012185_01487;product=Beta-lactamase;gene=tPR;Parent=GCA000012185_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0790,COG:R,RefSeq:WP_011272534.1,SO:0001217,UniParc:UPI0000052A45,UniRef:UniRef100_Q4QKS6,UniRef:UniRef50_A0A448Q8D5,UniRef:UniRef90_Q4QKS6
contig_1	Pyrodigal	gene	1462562	1462738	.	+	.	ID=GCA000012185_01488_gene;locus_tag=GCA000012185_01488
contig_1	Pyrodigal	CDS	1462562	1462738	.	+	0	ID=GCA000012185_01488;Name=hypothetical protein;locus_tag=GCA000012185_01488;product=hypothetical protein;Parent=GCA000012185_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005651000.1,SO:0001217,UniParc:UPI0000052A46,UniRef:UniRef100_A0A2S9RCQ1,UniRef:UniRef50_A0A2S9RCQ1,UniRef:UniRef90_A0A2S9RCQ1
contig_1	Pyrodigal	gene	1462751	1463305	.	+	.	ID=GCA000012185_01489_gene;locus_tag=GCA000012185_01489
contig_1	Pyrodigal	CDS	1462751	1463305	.	+	0	ID=GCA000012185_01489;Name=Sel1 repeat family protein;locus_tag=GCA000012185_01489;product=Sel1 repeat family protein;Parent=GCA000012185_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272535.1,SO:0001217,UniParc:UPI0000052A47,UniRef:UniRef100_A0AAJ8WCX8,UniRef:UniRef50_A0A448Q8D5,UniRef:UniRef90_A0AAJ8WCX8
contig_1	Pyrodigal	gene	1463305	1463481	.	+	.	ID=GCA000012185_01490_gene;locus_tag=GCA000012185_01490
contig_1	Pyrodigal	CDS	1463305	1463481	.	+	0	ID=GCA000012185_01490;Name=hypothetical protein;locus_tag=GCA000012185_01490;product=hypothetical protein;Parent=GCA000012185_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272536.1,SO:0001217,UniParc:UPI0000052A48,UniRef:UniRef100_A0AAJ8WD58,UniRef:UniRef50_A0A2S9RCQ1,UniRef:UniRef90_A0A2S9RCQ1
contig_1	Pyrodigal	gene	1463494	1464045	.	+	.	ID=GCA000012185_01491_gene;locus_tag=GCA000012185_01491;gene=tPR
contig_1	Pyrodigal	CDS	1463494	1464045	.	+	0	ID=GCA000012185_01491;Name=Beta-lactamase;locus_tag=GCA000012185_01491;product=Beta-lactamase;gene=tPR;Parent=GCA000012185_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0790,COG:R,RefSeq:WP_011272537.1,SO:0001217,UniParc:UPI000053E237,UniRef:UniRef100_A0A2S9S9G1,UniRef:UniRef50_A0A448Q8D5,UniRef:UniRef90_Q4QKS6
contig_1	Pyrodigal	gene	1464321	1465406	.	+	.	ID=GCA000012185_01492_gene;locus_tag=GCA000012185_01492;gene=prfA
contig_1	Pyrodigal	CDS	1464321	1465406	.	+	0	ID=GCA000012185_01492;Name=peptide chain release factor 1;locus_tag=GCA000012185_01492;product=peptide chain release factor 1;Dbxref=GO:0003747,GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000012185_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,SO:0001217,UniParc:UPI000053E238,UniRef:UniRef100_Q4QKS1,UniRef:UniRef50_P0A7I0,UniRef:UniRef90_P43917
contig_1	Pyrodigal	gene	1465459	1465899	.	+	.	ID=GCA000012185_01493_gene;locus_tag=GCA000012185_01493;gene=yckC
contig_1	Pyrodigal	CDS	1465459	1465899	.	+	0	ID=GCA000012185_01493;Name=putative protein HI_1560;locus_tag=GCA000012185_01493;product=putative protein HI_1560;Dbxref=GO:0005886;gene=yckC;Parent=GCA000012185_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1714,COG:S,RefSeq:WP_005654790.1,SO:0001217,UniParc:UPI00014FB3A5,UniRef:UniRef100_A0A3E1QFQ9,UniRef:UniRef50_P44253,UniRef:UniRef90_P44253
contig_1	Pyrodigal	gene	1465899	1466777	.	+	.	ID=GCA000012185_01494_gene;locus_tag=GCA000012185_01494;gene=prmC
contig_1	Pyrodigal	CDS	1465899	1466777	.	+	0	ID=GCA000012185_01494;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000012185_01494;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000012185_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K02493,RefSeq:WP_005654788.1,SO:0001217,UniParc:UPI000053E23A,UniRef:UniRef100_A0A2R3G3B0,UniRef:UniRef50_P45253,UniRef:UniRef90_P45253;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	1466777	1467580	.	+	.	ID=GCA000012185_01495_gene;locus_tag=GCA000012185_01495;gene=sirB1
contig_1	Pyrodigal	CDS	1466777	1467580	.	+	0	ID=GCA000012185_01495;Name=UPF0162 protein HI_1558;locus_tag=GCA000012185_01495;product=UPF0162 protein HI_1558;gene=sirB1;Parent=GCA000012185_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2912,COG:T,RefSeq:WP_005654786.1,SO:0001217,UniParc:UPI000013AD53,UniRef:UniRef100_P45252,UniRef:UniRef50_P45252,UniRef:UniRef90_P45252
contig_1	Pyrodigal	gene	1467595	1468449	.	+	.	ID=GCA000012185_01496_gene;locus_tag=GCA000012185_01496;gene=kdsA
contig_1	Pyrodigal	CDS	1467595	1468449	.	+	0	ID=GCA000012185_01496;Name=2-dehydro-3-deoxyphosphooctonate aldolase;locus_tag=GCA000012185_01496;product=2-dehydro-3-deoxyphosphooctonate aldolase;Dbxref=GO:0005737,GO:0008676,GO:0019294;gene=kdsA;Parent=GCA000012185_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2877,COG:M,KEGG:K01627,RefSeq:WP_005654784.1,SO:0001217,UniParc:UPI000053E23B,UniRef:UniRef100_Q4QKR7,UniRef:UniRef50_P0A715,UniRef:UniRef90_P45251,VFDB:VFC0258,VFDB:VFG013465;ec_number=2.5.1.55
contig_1	Pyrodigal	gene	1468509	1469456	.	+	.	ID=GCA000012185_01497_gene;locus_tag=GCA000012185_01497;gene=ldhA
contig_1	Pyrodigal	CDS	1468509	1469456	.	+	0	ID=GCA000012185_01497;Name=2-hydroxyacid dehydrogenase;locus_tag=GCA000012185_01497;product=2-hydroxyacid dehydrogenase;Dbxref=GO:0016616,GO:0051287;gene=ldhA;Parent=GCA000012185_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_005654781.1,SO:0001217,UniParc:UPI000053E23C,UniRef:UniRef100_A0A2R3G085,UniRef:UniRef50_P45250,UniRef:UniRef90_P45250;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1469456	1470637	.	+	.	ID=GCA000012185_01498_gene;locus_tag=GCA000012185_01498;gene=lolC
contig_1	Pyrodigal	CDS	1469456	1470637	.	+	0	ID=GCA000012185_01498;Name=lipoprotein-releasing ABC transporter permease subunit;locus_tag=GCA000012185_01498;product=lipoprotein-releasing ABC transporter permease subunit;Dbxref=GO:0005886,GO:0042953,GO:0044874,GO:0098797;gene=lolC;Parent=GCA000012185_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_005654778.1,SO:0001217,UniParc:UPI000012E7CF,UniRef:UniRef100_P44252,UniRef:UniRef50_P44252,UniRef:UniRef90_P44252
contig_1	Pyrodigal	gene	1470649	1471941	.	+	.	ID=GCA000012185_01499_gene;locus_tag=GCA000012185_01499;gene=bioA
contig_1	Pyrodigal	CDS	1470649	1471941	.	+	0	ID=GCA000012185_01499;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000012185_01499;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170;gene=bioA;Parent=GCA000012185_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,SO:0001217,UniParc:UPI000053E23D,UniRef:UniRef100_A0A2S9REF7,UniRef:UniRef50_P53656,UniRef:UniRef90_P44426;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	1471950	1473089	.	+	.	ID=GCA000012185_01500_gene;locus_tag=GCA000012185_01500;gene=bioF
contig_1	Pyrodigal	CDS	1471950	1473089	.	+	0	ID=GCA000012185_01500;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000012185_01500;product=8-amino-7-oxononanoate synthase;Dbxref=GO:0008710,GO:0009102,GO:0030170;gene=bioF;Parent=GCA000012185_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_011272541.1,SO:0001217,UniParc:UPI00003CDAE1,UniRef:UniRef100_Q4QKR3,UniRef:UniRef50_A9M251,UniRef:UniRef90_A9M251;ec_number=2.3.1.47
contig_1	Pyrodigal	gene	1473099	1473746	.	+	.	ID=GCA000012185_01501_gene;locus_tag=GCA000012185_01501
contig_1	Pyrodigal	CDS	1473099	1473746	.	+	0	ID=GCA000012185_01501;Name=Dithiobiotin synthetase;locus_tag=GCA000012185_01501;product=Dithiobiotin synthetase;Parent=GCA000012185_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2830,COG:S,KEGG:K09789,RefSeq:WP_011272542.1,SO:0001217,UniParc:UPI000053E23E,UniRef:UniRef100_A0A2R3FZ19,UniRef:UniRef50_P44251,UniRef:UniRef90_A0A1B8QUH5;ec_number=3.1.1.85
contig_1	Pyrodigal	gene	1473734	1474516	.	+	.	ID=GCA000012185_01502_gene;locus_tag=GCA000012185_01502;gene=bioC
contig_1	Pyrodigal	CDS	1473734	1474516	.	+	0	ID=GCA000012185_01502;Name=malonyl-ACP O-methyltransferase BioC;locus_tag=GCA000012185_01502;product=malonyl-ACP O-methyltransferase BioC;Dbxref=GO:0009102,GO:0010340;gene=bioC;Parent=GCA000012185_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_011272543.1,SO:0001217,UniParc:UPI00003CDB1C,UniRef:UniRef100_A0A2R3FZ08,UniRef:UniRef50_P45249,UniRef:UniRef90_A0A2R3FZ08;ec_number=2.1.1.197
contig_1	Pyrodigal	gene	1474526	1475167	.	+	.	ID=GCA000012185_01503_gene;locus_tag=GCA000012185_01503;gene=bioD
contig_1	Pyrodigal	CDS	1474526	1475167	.	+	0	ID=GCA000012185_01503;Name=dethiobiotin synthase;locus_tag=GCA000012185_01503;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0005829,GO:0009102;gene=bioD;Parent=GCA000012185_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_011272544.1,SO:0001217,UniParc:UPI000053E23F,UniRef:UniRef100_Q4QKR0,UniRef:UniRef50_P45248,UniRef:UniRef90_P45248;ec_number=6.3.3.3
contig_1	Pyrodigal	gene	1475249	1475932	.	+	.	ID=GCA000012185_01504_gene;locus_tag=GCA000012185_01504;gene=lolD
contig_1	Pyrodigal	CDS	1475249	1475932	.	+	0	ID=GCA000012185_01504;Name=lipoprotein-releasing ABC transporter ATP-binding protein LolD;locus_tag=GCA000012185_01504;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0042953,GO:0043190,GO:0044874,GO:0055085,GO:0089705;gene=lolD;Parent=GCA000012185_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_005693575.1,SO:0001217,UniParc:UPI000012E7D5,UniRef:UniRef100_P45247,UniRef:UniRef50_P45247,UniRef:UniRef90_P45247;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1475932	1477182	.	+	.	ID=GCA000012185_01505_gene;locus_tag=GCA000012185_01505;gene=lolE
contig_1	Pyrodigal	CDS	1475932	1477182	.	+	0	ID=GCA000012185_01505;Name=lipoprotein-releasing ABC transporter permease subunit LolE;locus_tag=GCA000012185_01505;product=lipoprotein-releasing ABC transporter permease subunit LolE;Dbxref=GO:0016020,GO:0042953,GO:0044874,GO:0098797;gene=lolE;Parent=GCA000012185_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_011272545.1,SO:0001217,UniParc:UPI000053E240,UniRef:UniRef100_A0A2R3FZQ5,UniRef:UniRef50_P44250,UniRef:UniRef90_P44250
contig_1	Pyrodigal	gene	1477401	1478489	.	+	.	ID=GCA000012185_01506_gene;locus_tag=GCA000012185_01506;gene=aroG
contig_1	Pyrodigal	CDS	1477401	1478489	.	+	0	ID=GCA000012185_01506;Name=3-deoxy-7-phosphoheptulonate synthase AroG;locus_tag=GCA000012185_01506;product=3-deoxy-7-phosphoheptulonate synthase AroG;Dbxref=GO:0003849,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroG;Parent=GCA000012185_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0722,COG:E,KEGG:K01626,RefSeq:WP_005687779.1,SO:0001217,UniParc:UPI000053E241,UniRef:UniRef100_A0A0C5FH28,UniRef:UniRef50_P44303,UniRef:UniRef90_P44303;ec_number=2.5.1.54
contig_1	Pyrodigal	gene	1478559	1478999	.	-	.	ID=GCA000012185_01507_gene;locus_tag=GCA000012185_01507;gene=lexA
contig_1	Pyrodigal	CDS	1478559	1478999	.	-	0	ID=GCA000012185_01507;Name=DNA polymerase V subunit UmuD;locus_tag=GCA000012185_01507;product=DNA polymerase V subunit UmuD;gene=lexA;Parent=GCA000012185_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,RefSeq:WP_005667050.1,SO:0001217,UniParc:UPI000039ABBC,UniRef:UniRef100_A0A2R3FN13,UniRef:UniRef50_P44249,UniRef:UniRef90_A0A2X4R5V3
contig_1	Pyrodigal	gene	1479284	1480528	.	+	.	ID=GCA000012185_01508_gene;locus_tag=GCA000012185_01508;gene=sstT
contig_1	Pyrodigal	CDS	1479284	1480528	.	+	0	ID=GCA000012185_01508;Name=serine/threonine transporter SstT;locus_tag=GCA000012185_01508;product=serine/threonine transporter SstT;Dbxref=GO:0005295,GO:0005886,GO:0015293,GO:0015826,GO:0016020,GO:0032329;gene=sstT;Parent=GCA000012185_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3633,COG:E,RefSeq:WP_011272546.1,SO:0001217,UniParc:UPI000053E242,UniRef:UniRef100_Q4QKQ5,UniRef:UniRef50_P0AGE4,UniRef:UniRef90_P45246
contig_1	Pyrodigal	gene	1480650	1481258	.	+	.	ID=GCA000012185_01509_gene;locus_tag=GCA000012185_01509;gene=mdaB
contig_1	Pyrodigal	CDS	1480650	1481258	.	+	0	ID=GCA000012185_01509;Name=putative NAD(P)H oxidoreductase HI_1544;locus_tag=GCA000012185_01509;product=putative NAD(P)H oxidoreductase HI_1544;Dbxref=GO:0003955,GO:0005829;gene=mdaB;Parent=GCA000012185_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2249,COG:R,RefSeq:WP_005687782.1,SO:0001217,UniParc:UPI000053E243,UniRef:UniRef100_A0A2R3FMR6,UniRef:UniRef50_P45245,UniRef:UniRef90_P45245;ec_number=1.6.99.-
contig_1	Pyrodigal	gene	1481258	1481812	.	+	.	ID=GCA000012185_01510_gene;locus_tag=GCA000012185_01510;gene=torD
contig_1	Pyrodigal	CDS	1481258	1481812	.	+	0	ID=GCA000012185_01510;Name=putative protein HI_1543;locus_tag=GCA000012185_01510;product=putative protein HI_1543;gene=torD;Parent=GCA000012185_01510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3381,COG:O,RefSeq:WP_011272547.1,SO:0001217,UniParc:UPI00003CDB74,UniRef:UniRef100_A0A2S9S9J6,UniRef:UniRef50_P44248,UniRef:UniRef90_P44248
contig_1	Pyrodigal	gene	1481859	1482413	.	-	.	ID=GCA000012185_01511_gene;locus_tag=GCA000012185_01511;gene=nfnB
contig_1	Pyrodigal	CDS	1481859	1482413	.	-	0	ID=GCA000012185_01511;Name=NAD(P)H nitroreductase;locus_tag=GCA000012185_01511;product=NAD(P)H nitroreductase;Dbxref=GO:0016491;gene=nfnB;Parent=GCA000012185_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_011272548.1,SO:0001217,UniParc:UPI00003CDB75,UniRef:UniRef100_A0A2S9S9H7,UniRef:UniRef50_P45244,UniRef:UniRef90_P45244;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1482511	1484358	.	+	.	ID=GCA000012185_01512_gene;locus_tag=GCA000012185_01512;gene=sppA
contig_1	Pyrodigal	CDS	1482511	1484358	.	+	0	ID=GCA000012185_01512;Name=signal peptide peptidase SppA;locus_tag=GCA000012185_01512;product=signal peptide peptidase SppA;Dbxref=GO:0005886,GO:0006465,GO:0006508,GO:0008233,GO:0008236,GO:0016020;gene=sppA;Parent=GCA000012185_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0616,COG:O,KEGG:K04773,RefSeq:WP_011272549.1,SO:0001217,UniParc:UPI000053E244,UniRef:UniRef100_A0A2S9S9I0,UniRef:UniRef50_P45243,UniRef:UniRef90_P45243;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1484396	1485193	.	-	.	ID=GCA000012185_01513_gene;locus_tag=GCA000012185_01513;gene=licD
contig_1	Pyrodigal	CDS	1484396	1485193	.	-	0	ID=GCA000012185_01513;Name=lipopolysaccharide cholinephosphotransferase LicD;locus_tag=GCA000012185_01513;product=lipopolysaccharide cholinephosphotransferase LicD;Dbxref=GO:0009100,GO:0009103,GO:0016740;gene=licD;Parent=GCA000012185_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693564,COG:COG3475,COG:I,KEGG:K07271,RefSeq:WP_011272550.1,SO:0001217,UniParc:UPI000053E245,UniRef:UniRef100_E5F154,UniRef:UniRef50_P14184,UniRef:UniRef90_P14184;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1485193	1485894	.	-	.	ID=GCA000012185_01514_gene;locus_tag=GCA000012185_01514;gene=licC
contig_1	Pyrodigal	CDS	1485193	1485894	.	-	0	ID=GCA000012185_01514;Name=phosphocholine cytidyltransferase;locus_tag=GCA000012185_01514;product=phosphocholine cytidyltransferase;Dbxref=GO:0009103,GO:0016779,GO:0046872;gene=licC;Parent=GCA000012185_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4750,COG:MI,RefSeq:WP_011272551.1,SO:0001217,UniParc:UPI000053E246,UniRef:UniRef100_A0A2S9S9K2,UniRef:UniRef50_P14183,UniRef:UniRef90_P14183,VFDB:VFC0258,VFDB:VFG000328;ec_number=2.7.7.15
contig_1	Pyrodigal	gene	1485891	1486769	.	-	.	ID=GCA000012185_01515_gene;locus_tag=GCA000012185_01515;gene=licB
contig_1	Pyrodigal	CDS	1485891	1486769	.	-	0	ID=GCA000012185_01515;Name=choline transport protein LicB;locus_tag=GCA000012185_01515;product=choline transport protein LicB;Dbxref=GO:0016020;gene=licB;Parent=GCA000012185_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005672105,COG:COG0697,COG:GER,RefSeq:WP_011272552.1,SO:0001217,UniParc:UPI000053E247,UniRef:UniRef100_A0A2S9S9J3,UniRef:UniRef50_P14182,UniRef:UniRef90_P14182
contig_1	Pyrodigal	gene	1486769	1487728	.	-	.	ID=GCA000012185_01516_gene;locus_tag=GCA000012185_01516;gene=licA
contig_1	Pyrodigal	CDS	1486769	1487728	.	-	0	ID=GCA000012185_01516;Name=choline kinase;locus_tag=GCA000012185_01516;product=choline kinase;Dbxref=GO:0004305,GO:0005737,GO:0006646;gene=licA;Parent=GCA000012185_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0510,COG:H,RefSeq:WP_005656830.1,SO:0001217,UniParc:UPI000053E248,UniRef:UniRef100_A0A0H3PMS3,UniRef:UniRef50_P14181,UniRef:UniRef90_P14181,VFDB:VFC0258,VFDB:VFG000326
contig_1	Pyrodigal	gene	1487816	1489828	.	-	.	ID=GCA000012185_01517_gene;locus_tag=GCA000012185_01517;gene=mnmC
contig_1	Pyrodigal	CDS	1487816	1489828	.	-	0	ID=GCA000012185_01517;Name=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;locus_tag=GCA000012185_01517;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;Dbxref=GO:0002098,GO:0004808,GO:0005737,GO:0008033,GO:0016645,GO:0032259,GO:0050660;gene=mnmC;Parent=GCA000012185_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4121,COG:J,KEGG:K15461,RefSeq:WP_011272553.1,SO:0001217,UniParc:UPI000053E249,UniRef:UniRef100_Q4QKP6,UniRef:UniRef50_P44246,UniRef:UniRef90_P44246;ec_number=2.1.1.61
contig_1	Pyrodigal	gene	1489975	1491195	.	+	.	ID=GCA000012185_01518_gene;locus_tag=GCA000012185_01518;gene=fabB
contig_1	Pyrodigal	CDS	1489975	1491195	.	+	0	ID=GCA000012185_01518;Name=beta-ketoacyl-ACP synthase I;locus_tag=GCA000012185_01518;product=beta-ketoacyl-ACP synthase I;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabB;Parent=GCA000012185_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_011272554.1,SO:0001217,UniParc:UPI00003CDBE0,UniRef:UniRef100_Q4QKP5,UniRef:UniRef50_P0A953,UniRef:UniRef90_P43710;ec_number=2.3.1.41
contig_1	Pyrodigal	gene	1491258	1491521	.	-	.	ID=GCA000012185_01519_gene;locus_tag=GCA000012185_01519;gene=grxA
contig_1	Pyrodigal	CDS	1491258	1491521	.	-	0	ID=GCA000012185_01519;Name=GrxA family glutaredoxin;locus_tag=GCA000012185_01519;product=GrxA family glutaredoxin;Dbxref=GO:0005737,GO:0009055,GO:0015035,GO:0015038,GO:0034599,GO:0045454;gene=grxA;Parent=GCA000012185_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,RefSeq:WP_005628952.1,SO:0001217,UniParc:UPI000012B7CF,UniRef:UniRef100_P45242,UniRef:UniRef50_P68688,UniRef:UniRef90_P45242
contig_1	Pyrodigal	gene	1491638	1492546	.	+	.	ID=GCA000012185_01520_gene;locus_tag=GCA000012185_01520;gene=rimK
contig_1	Pyrodigal	CDS	1491638	1492546	.	+	0	ID=GCA000012185_01520;Name=putative alpha-L-glutamate ligase;locus_tag=GCA000012185_01520;product=putative alpha-L-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0006412,GO:0009432,GO:0018169,GO:0036211,GO:0046872;gene=rimK;Parent=GCA000012185_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0189,COG:EHJQ,KEGG:K05844,RefSeq:WP_011272555.1,SO:0001217,UniParc:UPI000053E24A,UniRef:UniRef100_Q4QKP3,UniRef:UniRef50_P45241,UniRef:UniRef90_P45241;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	1492584	1493798	.	-	.	ID=GCA000012185_01521_gene;locus_tag=GCA000012185_01521;gene=gltS
contig_1	Pyrodigal	CDS	1492584	1493798	.	-	0	ID=GCA000012185_01521;Name=sodium/glutamate symporter;locus_tag=GCA000012185_01521;product=sodium/glutamate symporter;Dbxref=GO:0005886,GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA000012185_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,KEGG:K03312,RefSeq:WP_005660287.1,SO:0001217,UniParc:UPI000053E24B,UniRef:UniRef100_A0A0D0H1M8,UniRef:UniRef50_P45240,UniRef:UniRef90_P45240
contig_1	Pyrodigal	gene	1493840	1496083	.	-	.	ID=GCA000012185_01522_gene;locus_tag=GCA000012185_01522;gene=parC
contig_1	Pyrodigal	CDS	1493840	1496083	.	-	0	ID=GCA000012185_01522;Name=DNA topoisomerase IV subunit A;locus_tag=GCA000012185_01522;product=DNA topoisomerase IV subunit A;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006265,GO:0007059,GO:0009330,GO:0009340,GO:0019897,GO:0034335;gene=parC;Parent=GCA000012185_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_011272556.1,SO:0001217,UniParc:UPI000053E24C,UniRef:UniRef100_Q4QKP1,UniRef:UniRef50_P0AFI2,UniRef:UniRef90_P43702;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1496150	1498048	.	-	.	ID=GCA000012185_01523_gene;locus_tag=GCA000012185_01523;gene=parE
contig_1	Pyrodigal	CDS	1496150	1498048	.	-	0	ID=GCA000012185_01523;Name=DNA topoisomerase IV subunit B;locus_tag=GCA000012185_01523;product=DNA topoisomerase IV subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872;gene=parE;Parent=GCA000012185_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,RefSeq:WP_011272557.1,SO:0001217,UniParc:UPI000053E24D,UniRef:UniRef100_A0AAJ8WS07,UniRef:UniRef50_A0A0J9WZF0,UniRef:UniRef90_P43703;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1498122	1499057	.	-	.	ID=GCA000012185_01524_gene;locus_tag=GCA000012185_01524;gene=htrB
contig_1	Pyrodigal	CDS	1498122	1499057	.	-	0	ID=GCA000012185_01524;Name=lipid A biosynthesis lauroyl acyltransferase HtrB;locus_tag=GCA000012185_01524;product=lipid A biosynthesis lauroyl acyltransferase HtrB;Dbxref=GO:0005886,GO:0008913,GO:0009103,GO:0009245,GO:0036104;gene=htrB;Parent=GCA000012185_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005693550,COG:COG1560,COG:I,KEGG:K02517,RefSeq:WP_005656817.1,SO:0001217,UniParc:UPI00003CDA56,UniRef:UniRef100_A0A0H3PDC2,UniRef:UniRef50_P0ACV0,UniRef:UniRef90_P45239;ec_number=2.3.1.241
contig_1	Pyrodigal	gene	1499154	1500584	.	+	.	ID=GCA000012185_01525_gene;locus_tag=GCA000012185_01525;gene=rfaE
contig_1	Pyrodigal	CDS	1499154	1500584	.	+	0	ID=GCA000012185_01525;Name=ADP-heptose synthase;locus_tag=GCA000012185_01525;product=ADP-heptose synthase;Dbxref=GO:0005524,GO:0005829,GO:0005975,GO:0009058,GO:0016773,GO:0016779,GO:0033785,GO:0033786,GO:0097171;gene=rfaE;Parent=GCA000012185_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2870,COG:M,KEGG:K03272,RefSeq:WP_005656815.1,SO:0001217,UniParc:UPI000053E24E,UniRef:UniRef100_Q4QKN8,UniRef:UniRef50_O05074,UniRef:UniRef90_O05074,VFDB:VFC0258,VFDB:VFG000331;ec_number=2.7.7.70
contig_1	Pyrodigal	gene	1500948	1501043	.	-	.	ID=GCA000012185_01526_gene;locus_tag=GCA000012185_01526;gene=hsdR
contig_1	Pyrodigal	CDS	1500948	1501043	.	-	0	ID=GCA000012185_01526;Name=Type I restriction enzyme HindI endonuclease subunit;locus_tag=GCA000012185_01526;product=Type I restriction enzyme HindI endonuclease subunit;Dbxref=GO:0003677,GO:0005524,GO:0009035,GO:0009307;gene=hsdR;Parent=GCA000012185_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0610,COG:V,KEGG:K01153,SO:0001217,UniParc:UPI0000E60143,UniRef:UniRef100_A0A0H3PMR3,UniRef:UniRef50_O05052,UniRef:UniRef90_O05052;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	1501728	1502126	.	+	.	ID=GCA000012185_01527_gene;locus_tag=GCA000012185_01527
contig_1	Pyrodigal	CDS	1501728	1502126	.	+	0	ID=GCA000012185_01527;Name=ABC transporter ATP-binding protein uup;locus_tag=GCA000012185_01527;product=ABC transporter ATP-binding protein uup;Parent=GCA000012185_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005BECCC7,UniRef:UniRef100_A0AAJ8WRX0,UniRef:UniRef50_A0A2X1RFI8,UniRef:UniRef90_A0A2S9RZZ5
contig_1	Pyrodigal	gene	1502123	1502683	.	+	.	ID=GCA000012185_01528_gene;locus_tag=GCA000012185_01528
contig_1	Pyrodigal	CDS	1502123	1502683	.	+	0	ID=GCA000012185_01528;Name=ABC transporter ATP-binding protein uup;locus_tag=GCA000012185_01528;product=ABC transporter ATP-binding protein uup;Parent=GCA000012185_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E250,UniRef:UniRef100_A0AAJ8WRU5,UniRef:UniRef50_A0A2S9RZW1,UniRef:UniRef90_A0A2S9RZW1
contig_1	Pyrodigal	gene	1502711	1503400	.	-	.	ID=GCA000012185_01529_gene;locus_tag=GCA000012185_01529;gene=can
contig_1	Pyrodigal	CDS	1502711	1503400	.	-	0	ID=GCA000012185_01529;Name=carbonate dehydratase;locus_tag=GCA000012185_01529;product=carbonate dehydratase;Dbxref=GO:0004089,GO:0008270,GO:0015976;gene=can;Parent=GCA000012185_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0288,COG:P,KEGG:K01673,RefSeq:WP_005631770.1,SO:0001217,UniParc:UPI000013A040,UniRef:UniRef100_P45148,UniRef:UniRef50_P45148,UniRef:UniRef90_P45148;ec_number=4.2.1.1
contig_1	Pyrodigal	gene	1503476	1504879	.	-	.	ID=GCA000012185_01530_gene;locus_tag=GCA000012185_01530;gene=asnS
contig_1	Pyrodigal	CDS	1503476	1504879	.	-	0	ID=GCA000012185_01530;Name=asparagine--tRNA ligase;locus_tag=GCA000012185_01530;product=asparagine--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421;gene=asnS;Parent=GCA000012185_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_011272560.1,SO:0001217,UniParc:UPI00016100C2,UniRef:UniRef100_Q4QKN3,UniRef:UniRef50_P43829,UniRef:UniRef90_P43829;ec_number=6.1.1.22
contig_1	Pyrodigal	gene	1505106	1505579	.	+	.	ID=GCA000012185_01531_gene;locus_tag=GCA000012185_01531;gene=ribE
contig_1	Pyrodigal	CDS	1505106	1505579	.	+	0	ID=GCA000012185_01531;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000012185_01531;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005737,GO:0005829,GO:0009231,GO:0009349;gene=ribE;Parent=GCA000012185_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_011272561.1,SO:0001217,UniParc:UPI000053E252,UniRef:UniRef100_Q4QKN2,UniRef:UniRef50_P45149,UniRef:UniRef90_P45149;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	1505583	1506017	.	+	.	ID=GCA000012185_01532_gene;locus_tag=GCA000012185_01532;gene=nusB
contig_1	Pyrodigal	CDS	1505583	1506017	.	+	0	ID=GCA000012185_01532;Name=transcription antitermination factor NusB;locus_tag=GCA000012185_01532;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000012185_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_011272562.1,SO:0001217,UniParc:UPI00003CDB32,UniRef:UniRef100_Q4QKN1,UniRef:UniRef50_Q8ZC42,UniRef:UniRef90_P45150
contig_1	Pyrodigal	gene	1506084	1507070	.	+	.	ID=GCA000012185_01533_gene;locus_tag=GCA000012185_01533;gene=thiL
contig_1	Pyrodigal	CDS	1506084	1507070	.	+	0	ID=GCA000012185_01533;Name=thiamine-phosphate kinase;locus_tag=GCA000012185_01533;product=thiamine-phosphate kinase;Dbxref=GO:0000287,GO:0005524,GO:0009030,GO:0009228,GO:0009229;gene=thiL;Parent=GCA000012185_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0611,COG:H,KEGG:K00946,RefSeq:WP_011272563.1,SO:0001217,UniParc:UPI000053E253,UniRef:UniRef100_A0A2R3G456,UniRef:UniRef50_Q57190,UniRef:UniRef90_Q57190;ec_number=2.7.4.16
contig_1	Pyrodigal	gene	1507067	1507558	.	+	.	ID=GCA000012185_01534_gene;locus_tag=GCA000012185_01534;gene=pgpA
contig_1	Pyrodigal	CDS	1507067	1507558	.	+	0	ID=GCA000012185_01534;Name=Phosphatidylglycerophosphatase A;locus_tag=GCA000012185_01534;product=Phosphatidylglycerophosphatase A;Dbxref=GO:0005886,GO:0006655,GO:0008962,GO:0009395,GO:0046872;gene=pgpA;Parent=GCA000012185_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1267,COG:I,KEGG:K01095,RefSeq:WP_005650347.1,SO:0001217,UniParc:UPI000039AC67,UniRef:UniRef100_A0A2S9S8K9,UniRef:UniRef50_P44157,UniRef:UniRef90_P44157;ec_number=3.1.3.27
contig_1	Pyrodigal	gene	1507558	1508187	.	+	.	ID=GCA000012185_01535_gene;locus_tag=GCA000012185_01535;gene=rhtB
contig_1	Pyrodigal	CDS	1507558	1508187	.	+	0	ID=GCA000012185_01535;Name=putative membrane protein HI_1307;locus_tag=GCA000012185_01535;product=putative membrane protein HI_1307;Dbxref=GO:0005886,GO:0006865,GO:0015171;gene=rhtB;Parent=GCA000012185_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1280,COG:E,KEGG:K05835,RefSeq:WP_011272564.1,SO:0001217,UniParc:UPI000053E254,UniRef:UniRef100_A0A346KBH0,UniRef:UniRef50_Q57320,UniRef:UniRef90_Q57320
contig_1	Pyrodigal	gene	1508204	1509016	.	+	.	ID=GCA000012185_01536_gene;locus_tag=GCA000012185_01536;gene=dapB
contig_1	Pyrodigal	CDS	1508204	1509016	.	+	0	ID=GCA000012185_01536;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000012185_01536;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0008839,GO:0009089,GO:0016726,GO:0019877,GO:0050661,GO:0051287;gene=dapB;Parent=GCA000012185_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_011272565.1,SO:0001217,UniParc:UPI000053E255,UniRef:UniRef100_Q4QKM7,UniRef:UniRef50_P04036,UniRef:UniRef90_P45153;ec_number=1.17.1.8
contig_1	Pyrodigal	gene	1509011	1509259	.	-	.	ID=GCA000012185_01537_gene;locus_tag=GCA000012185_01537;gene=yfaE
contig_1	Pyrodigal	CDS	1509011	1509259	.	-	0	ID=GCA000012185_01537;Name=class I ribonucleotide reductase maintenance protein YfaE;locus_tag=GCA000012185_01537;product=class I ribonucleotide reductase maintenance protein YfaE;Dbxref=GO:0046872,GO:0051537;gene=yfaE;Parent=GCA000012185_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0633,RefSeq:WP_005662492.1,SO:0001217,UniParc:UPI000039A659,UniRef:UniRef100_A0A0C5ELP6,UniRef:UniRef50_P45154,UniRef:UniRef90_P45154
contig_1	Pyrodigal	gene	1509305	1510045	.	+	.	ID=GCA000012185_01538_gene;locus_tag=GCA000012185_01538
contig_1	Pyrodigal	CDS	1509305	1510045	.	+	0	ID=GCA000012185_01538;Name=putative protein HI_1310;locus_tag=GCA000012185_01538;product=putative protein HI_1310;Parent=GCA000012185_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272566.1,SO:0001217,UniParc:UPI000053E256,UniRef:UniRef100_A0A2R3FYY8,UniRef:UniRef50_P44158,UniRef:UniRef90_P44158
contig_1	Pyrodigal	gene	1510194	1511183	.	+	.	ID=GCA000012185_01539_gene;locus_tag=GCA000012185_01539;gene=pheS
contig_1	Pyrodigal	CDS	1510194	1511183	.	+	0	ID=GCA000012185_01539;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000012185_01539;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432;gene=pheS;Parent=GCA000012185_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0016,COG:J,KEGG:K01889,RefSeq:WP_011272567.1,SO:0001217,UniParc:UPI00003CD9FF,UniRef:UniRef100_Q4QKM4,UniRef:UniRef50_P08312,UniRef:UniRef90_P43819;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1511217	1513604	.	+	.	ID=GCA000012185_01540_gene;locus_tag=GCA000012185_01540;gene=pheT
contig_1	Pyrodigal	CDS	1511217	1513604	.	+	0	ID=GCA000012185_01540;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000012185_01540;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0006432,GO:0009328;gene=pheT;Parent=GCA000012185_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_011272568.1,SO:0001217,UniParc:UPI000053E257,UniRef:UniRef100_Q4QKM3,UniRef:UniRef50_P43820,UniRef:UniRef90_P43820;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1513606	1513896	.	+	.	ID=GCA000012185_01541_gene;locus_tag=GCA000012185_01541;gene=ihfA
contig_1	Pyrodigal	CDS	1513606	1513896	.	+	0	ID=GCA000012185_01541;Name=integration host factor subunit alpha;locus_tag=GCA000012185_01541;product=integration host factor subunit alpha;Dbxref=GO:0003677,GO:0005829,GO:0006310,GO:0006355,GO:0006417,GO:0030527;gene=ihfA;Parent=GCA000012185_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_005652847.1,SO:0001217,UniParc:UPI000012D432,UniRef:UniRef100_P43723,UniRef:UniRef50_Q5ZS10,UniRef:UniRef90_P43723
contig_1	Pyrodigal	gene	1513949	1514434	.	+	.	ID=GCA000012185_01542_gene;locus_tag=GCA000012185_01542;gene=nlpC
contig_1	Pyrodigal	CDS	1513949	1514434	.	+	0	ID=GCA000012185_01542;Name=putative endopeptidase HI_1314;locus_tag=GCA000012185_01542;product=putative endopeptidase HI_1314;Dbxref=GO:0005886,GO:0006508,GO:0008234;gene=nlpC;Parent=GCA000012185_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_011272569.1,SO:0001217,UniParc:UPI00003CD9AE,UniRef:UniRef100_A0A2R3FZL3,UniRef:UniRef50_Q57223,UniRef:UniRef90_Q57223;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1514500	1515453	.	+	.	ID=GCA000012185_01543_gene;locus_tag=GCA000012185_01543;gene=yobV
contig_1	Pyrodigal	CDS	1514500	1515453	.	+	0	ID=GCA000012185_01543;Name=WYL domain-containing protein;locus_tag=GCA000012185_01543;product=WYL domain-containing protein;gene=yobV;Parent=GCA000012185_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2378,COG:K,RefSeq:WP_005650362.1,SO:0001217,UniParc:UPI000039AC5F,UniRef:UniRef100_Q4QKM0,UniRef:UniRef50_U1QKU2,UniRef:UniRef90_H1LNV9
contig_1	Pyrodigal	gene	1515512	1515967	.	+	.	ID=GCA000012185_01544_gene;locus_tag=GCA000012185_01544
contig_1	Pyrodigal	CDS	1515512	1515967	.	+	0	ID=GCA000012185_01544;Name=5' nucleotidase%2C deoxy (Pyrimidine)%2C cytosolic type C protein (NT5C);locus_tag=GCA000012185_01544;product=5' nucleotidase%2C deoxy (Pyrimidine)%2C cytosolic type C protein (NT5C);Parent=GCA000012185_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650363.1,SO:0001217,UniParc:UPI000039AC5E,UniRef:UniRef100_A0A2R3G037,UniRef:UniRef50_C9PRC8,UniRef:UniRef90_A0A2R3G037
contig_1	Pyrodigal	gene	1515951	1516661	.	+	.	ID=GCA000012185_01545_gene;locus_tag=GCA000012185_01545
contig_1	Pyrodigal	CDS	1515951	1516661	.	+	0	ID=GCA000012185_01545;Name=NAD-dependent protein deacylase;locus_tag=GCA000012185_01545;product=NAD-dependent protein deacylase;Parent=GCA000012185_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272571.1,SO:0001217,UniParc:UPI00003CD9AF,UniRef:UniRef100_Q4QKL8,UniRef:UniRef50_Q9ZAB8,UniRef:UniRef90_A0A2R3G9C1
contig_1	Pyrodigal	gene	1516710	1517708	.	-	.	ID=GCA000012185_01546_gene;locus_tag=GCA000012185_01546;gene=rhuM
contig_1	Pyrodigal	CDS	1516710	1517708	.	-	0	ID=GCA000012185_01546;Name=Fido domain-containing protein;locus_tag=GCA000012185_01546;product=Fido domain-containing protein;gene=rhuM;Parent=GCA000012185_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3943,COG:S,KEGG:K07341,RefSeq:WP_038441270.1,SO:0001217,UniParc:UPI0002DAB277,UniRef:UniRef100_Q4QKL7,UniRef:UniRef50_A0A2P1NLY5,UniRef:UniRef90_Q4QKL7
contig_1	Pyrodigal	gene	1517927	1518127	.	+	.	ID=GCA000012185_01547_gene;locus_tag=GCA000012185_01547;gene=ftsK
contig_1	Pyrodigal	CDS	1517927	1518127	.	+	0	ID=GCA000012185_01547;Name=DNA translocase FtsK;locus_tag=GCA000012185_01547;product=DNA translocase FtsK;gene=ftsK;Parent=GCA000012185_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_005657409.1,SO:0001217,UniParc:UPI000039AC5B,UniRef:UniRef100_A0A0H3PD18,UniRef:UniRef50_A0A369Z9W8,UniRef:UniRef90_A0A0D0IM32
contig_1	Pyrodigal	gene	1518124	1518969	.	+	.	ID=GCA000012185_01548_gene;locus_tag=GCA000012185_01548;gene=sIR2
contig_1	Pyrodigal	CDS	1518124	1518969	.	+	0	ID=GCA000012185_01548;Name=NAD-dependent protein deacylase;locus_tag=GCA000012185_01548;product=NAD-dependent protein deacylase;gene=sIR2;Parent=GCA000012185_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_011272573.1,SO:0001217,UniParc:UPI000053E259,UniRef:UniRef100_A0A2R3G3H6,UniRef:UniRef50_A0A378NBA4,UniRef:UniRef90_A0A2S9S047
contig_1	Pyrodigal	gene	1518969	1519730	.	+	.	ID=GCA000012185_01549_gene;locus_tag=GCA000012185_01549
contig_1	Pyrodigal	CDS	1518969	1519730	.	+	0	ID=GCA000012185_01549;Name=PPM-type phosphatase domain-containing protein;locus_tag=GCA000012185_01549;product=PPM-type phosphatase domain-containing protein;Parent=GCA000012185_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272574.1,SO:0001217,UniParc:UPI000053E25A,UniRef:UniRef100_Q4QKL4,UniRef:UniRef50_A0A2X4R5J8,UniRef:UniRef90_Q4QKL4
contig_1	Pyrodigal	gene	1519808	1520782	.	+	.	ID=GCA000012185_01550_gene;locus_tag=GCA000012185_01550
contig_1	Pyrodigal	CDS	1519808	1520782	.	+	0	ID=GCA000012185_01550;Name=Restriction endonuclease type IV Mrr domain-containing protein;locus_tag=GCA000012185_01550;product=Restriction endonuclease type IV Mrr domain-containing protein;Parent=GCA000012185_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272575.1,SO:0001217,UniParc:UPI00003CDB17,UniRef:UniRef100_A0A2R3FYV9,UniRef:UniRef50_A0A1V3IKB6,UniRef:UniRef90_A4NZ32
contig_1	Pyrodigal	gene	1520859	1521026	.	+	.	ID=GCA000012185_01551_gene;locus_tag=GCA000012185_01551
contig_1	Pyrodigal	CDS	1520859	1521026	.	+	0	ID=GCA000012185_01551;Name=hypothetical protein;locus_tag=GCA000012185_01551;product=hypothetical protein;Parent=GCA000012185_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CDB18,UniRef:UniRef100_Q4QKL2,UniRef:UniRef50_Q4QKL2,UniRef:UniRef90_Q4QKL2
contig_1	Pyrodigal	gene	1521133	1522911	.	+	.	ID=GCA000012185_01552_gene;locus_tag=GCA000012185_01552;gene=spoVK
contig_1	Pyrodigal	CDS	1521133	1522911	.	+	0	ID=GCA000012185_01552;Name=AAA family ATPase;locus_tag=GCA000012185_01552;product=AAA family ATPase;gene=spoVK;Parent=GCA000012185_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0464,COG:MDT,SO:0001217,UniRef:UniRef50_A0A2S9S033,UniRef:UniRef90_A0A2S9S8K0
contig_1	Pyrodigal	gene	1522931	1523368	.	+	.	ID=GCA000012185_01553_gene;locus_tag=GCA000012185_01553
contig_1	Pyrodigal	CDS	1522931	1523368	.	+	0	ID=GCA000012185_01553;Name=Sulfatase N-terminal domain-containing protein;locus_tag=GCA000012185_01553;product=Sulfatase N-terminal domain-containing protein;Parent=GCA000012185_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E25C,UniRef:UniRef100_A0A2R3FZK3,UniRef:UniRef50_U7VE47,UniRef:UniRef90_A4N3T9
contig_1	Pyrodigal	gene	1523450	1524262	.	+	.	ID=GCA000012185_01554_gene;locus_tag=GCA000012185_01554;gene=yeaD
contig_1	Pyrodigal	CDS	1523450	1524262	.	+	0	ID=GCA000012185_01554;Name=Putative glucose-6-phosphate 1-epimerase;locus_tag=GCA000012185_01554;product=Putative glucose-6-phosphate 1-epimerase;gene=yeaD;Parent=GCA000012185_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0676,COG:G,RefSeq:WP_011272579.1,SO:0001217,UniParc:UPI000053E25D,UniRef:UniRef100_A0A2R3G487,UniRef:UniRef50_P44160,UniRef:UniRef90_A0A0D0IG33
contig_1	Pyrodigal	gene	1524530	1524937	.	+	.	ID=GCA000012185_01555_gene;locus_tag=GCA000012185_01555;gene=infC
contig_1	Pyrodigal	CDS	1524530	1524937	.	+	0	ID=GCA000012185_01555;Name=translation initiation factor IF-3;locus_tag=GCA000012185_01555;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0032790,GO:0043022;gene=infC;Parent=GCA000012185_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0290,COG:J,SO:0001217,UniParc:UPI000016F763,UniRef:UniRef100_A0A0H3PLE0,UniRef:UniRef50_P43814,UniRef:UniRef90_P43814
contig_1	Pyrodigal	gene	1525076	1525345	.	+	.	ID=GCA000012185_01556_gene;locus_tag=GCA000012185_01556;gene=rpmI
contig_1	Pyrodigal	CDS	1525076	1525345	.	+	0	ID=GCA000012185_01556;Name=50S ribosomal protein L35;locus_tag=GCA000012185_01556;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412;gene=rpmI;Parent=GCA000012185_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02916,SO:0001217,UniParc:UPI000016F764,UniRef:UniRef100_A0A2S9RK95,UniRef:UniRef50_Q082E3,UniRef:UniRef90_A0A0Y7LF96
contig_1	Pyrodigal	gene	1525411	1525764	.	+	.	ID=GCA000012185_01557_gene;locus_tag=GCA000012185_01557;gene=rplT
contig_1	Pyrodigal	CDS	1525411	1525764	.	+	0	ID=GCA000012185_01557;Name=50S ribosomal protein L20;locus_tag=GCA000012185_01557;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA000012185_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_005596075.1,SO:0001217,UniParc:UPI00001685F3,UniRef:UniRef100_P44358,UniRef:UniRef50_P44358,UniRef:UniRef90_P44358
contig_1	Pyrodigal	gene	1525877	1529512	.	+	.	ID=GCA000012185_01558_gene;locus_tag=GCA000012185_01558;gene=recB
contig_1	Pyrodigal	CDS	1525877	1529512	.	+	0	ID=GCA000012185_01558;Name=exodeoxyribonuclease V subunit beta;locus_tag=GCA000012185_01558;product=exodeoxyribonuclease V subunit beta;Dbxref=GO:0000287,GO:0000724,GO:0000725,GO:0003677,GO:0003689,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008854,GO:0009338,GO:0016853,GO:0016887,GO:0043138,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recB;Parent=GCA000012185_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K03582,RefSeq:WP_011272580.1,SO:0001217,UniParc:UPI000053E25E,UniRef:UniRef100_A0AAJ8WRW0,UniRef:UniRef50_P45157,UniRef:UniRef90_P45157;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1529512	1531434	.	+	.	ID=GCA000012185_01559_gene;locus_tag=GCA000012185_01559;gene=recD
contig_1	Pyrodigal	CDS	1529512	1531434	.	+	0	ID=GCA000012185_01559;Name=exodeoxyribonuclease V subunit alpha;locus_tag=GCA000012185_01559;product=exodeoxyribonuclease V subunit alpha;Dbxref=GO:0000724,GO:0003677,GO:0003689,GO:0003723,GO:0004386,GO:0005524,GO:0006281,GO:0006310,GO:0008854,GO:0009338,GO:0016853,GO:0016887,GO:0043139,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recD;Parent=GCA000012185_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_005688199.1,SO:0001217,UniParc:UPI000053E25F,UniRef:UniRef100_A0A2R3FMY0,UniRef:UniRef50_P45158,UniRef:UniRef90_P45158;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	1531503	1531949	.	-	.	ID=GCA000012185_01560_gene;locus_tag=GCA000012185_01560;gene=matP
contig_1	Pyrodigal	CDS	1531503	1531949	.	-	0	ID=GCA000012185_01560;Name=macrodomain Ter protein MatP;locus_tag=GCA000012185_01560;product=macrodomain Ter protein MatP;Dbxref=GO:0005737,GO:0006355,GO:0043565,GO:0051301;gene=matP;Parent=GCA000012185_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3120,COG:L,RefSeq:WP_005662425.1,SO:0001217,UniParc:UPI000039A643,UniRef:UniRef100_Q4QKK3,UniRef:UniRef50_P44161,UniRef:UniRef90_P44161
contig_1	Pyrodigal	gene	1532076	1533851	.	+	.	ID=GCA000012185_01561_gene;locus_tag=GCA000012185_01561;gene=lonB
contig_1	Pyrodigal	CDS	1532076	1533851	.	+	0	ID=GCA000012185_01561;Name=Putative Lon protease-like protein;locus_tag=GCA000012185_01561;product=Putative Lon protease-like protein;Dbxref=GO:0004176,GO:0004252,GO:0005524,GO:0006508,GO:0030163;gene=lonB;Parent=GCA000012185_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1067,COG:O,KEGG:K04770,RefSeq:WP_005662423.1,SO:0001217,UniParc:UPI00014F7D7B,UniRef:UniRef100_A0AB34I8M2,UniRef:UniRef50_P43865,UniRef:UniRef90_P43865;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1534020	1534553	.	+	.	ID=GCA000012185_01562_gene;locus_tag=GCA000012185_01562;gene=fabA
contig_1	Pyrodigal	CDS	1534020	1534553	.	+	0	ID=GCA000012185_01562;Name=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;locus_tag=GCA000012185_01562;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;Dbxref=GO:0005737,GO:0006633,GO:0006636,GO:0019171,GO:0034017;gene=fabA;Parent=GCA000012185_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K01716,RefSeq:WP_011272582.1,SO:0001217,UniParc:UPI000045E8E8,UniRef:UniRef100_Q4QKK1,UniRef:UniRef50_P0A6Q3,UniRef:UniRef90_P45159;ec_number=5.3.3.14
contig_1	Pyrodigal	gene	1534792	1535517	.	+	.	ID=GCA000012185_01563_gene;locus_tag=GCA000012185_01563
contig_1	Pyrodigal	CDS	1534792	1535517	.	+	0	ID=GCA000012185_01563;Name=putative protein HI_1326;locus_tag=GCA000012185_01563;product=putative protein HI_1326;Parent=GCA000012185_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P44162,UniRef:UniRef90_P44162
contig_1	Pyrodigal	gene	1535514	1535651	.	+	.	ID=GCA000012185_01564_gene;locus_tag=GCA000012185_01564
contig_1	Pyrodigal	CDS	1535514	1535651	.	+	0	ID=GCA000012185_01564;Name=Lipoprotein;locus_tag=GCA000012185_01564;product=Lipoprotein;Parent=GCA000012185_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272583.1,SO:0001217,UniParc:UPI000053E261,UniRef:UniRef100_Q4QKJ9,UniRef:UniRef50_A0A2X4U406,UniRef:UniRef90_Q4QKJ9
contig_1	Infernal	regulatory_region	1535723	1535843	5.5e-16	+	.	ID=JPLKGDNPJF_100;Name=Ribosomal S15 leader;product=Ribosomal S15 leader;Dbxref=RFAM:RF00114;inference=profile:Rfam:RF00114;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1535787	1536056	.	+	.	ID=GCA000012185_01565_gene;locus_tag=GCA000012185_01565;gene=rpsO
contig_1	Pyrodigal	CDS	1535787	1536056	.	+	0	ID=GCA000012185_01565;Name=30S ribosomal protein S15;locus_tag=GCA000012185_01565;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000012185_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_005628925.1,SO:0001217,UniParc:UPI000053E262,UniRef:UniRef100_Q4QKJ8,UniRef:UniRef50_Q6MMS3,UniRef:UniRef90_Q4QKJ8
contig_1	Pyrodigal	gene	1536128	1536499	.	-	.	ID=GCA000012185_01566_gene;locus_tag=GCA000012185_01566
contig_1	Pyrodigal	CDS	1536128	1536499	.	-	0	ID=GCA000012185_01566;Name=putative transposase-like protein HI_1328-1;locus_tag=GCA000012185_01566;product=putative transposase-like protein HI_1328-1;Dbxref=GO:0006310,GO:0032196;Parent=GCA000012185_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E263,UniRef:UniRef100_Q4QKJ7,UniRef:UniRef50_O86236,UniRef:UniRef90_O86236
contig_1	Pyrodigal	gene	1536828	1538267	.	-	.	ID=GCA000012185_01567_gene;locus_tag=GCA000012185_01567;gene=dacB
contig_1	Pyrodigal	CDS	1536828	1538267	.	-	0	ID=GCA000012185_01567;Name=serine-type D-Ala-D-Ala carboxypeptidase;locus_tag=GCA000012185_01567;product=serine-type D-Ala-D-Ala carboxypeptidase;Dbxref=GO:0000270,GO:0004185,GO:0006508,GO:0008360,GO:0009002,GO:0009252,GO:0042597,GO:0046677,GO:0051301,GO:0071555;gene=dacB;Parent=GCA000012185_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2027,COG:M,KEGG:K07259,RefSeq:WP_005688211.1,SO:0001217,UniParc:UPI000053E265,UniRef:UniRef100_A8E0K8,UniRef:UniRef50_P45161,UniRef:UniRef90_P45161;ec_number=3.4.21.-
contig_1	Infernal	gene	1538265	1538346	.	+	.	ID=GCA000012185_01568_gene;locus_tag=GCA000012185_01568;gene=AaHKsRNA69
contig_1	Infernal	ncRNA	1538265	1538346	9e-07	+	.	ID=GCA000012185_01568;Name=Aggregatibacter sRNA 69;locus_tag=GCA000012185_01568;product=Aggregatibacter sRNA 69;Dbxref=RFAM:RF02904;Parent=GCA000012185_01568_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02904
contig_1	Pyrodigal	gene	1538431	1538907	.	+	.	ID=GCA000012185_01569_gene;locus_tag=GCA000012185_01569;gene=greA
contig_1	Pyrodigal	CDS	1538431	1538907	.	+	0	ID=GCA000012185_01569;Name=transcription elongation factor GreA;locus_tag=GCA000012185_01569;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greA;Parent=GCA000012185_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_005650402.1,SO:0001217,UniParc:UPI000039A63C,UniRef:UniRef100_A0A0D0HSM7,UniRef:UniRef50_Q9KU89,UniRef:UniRef90_P43881
contig_1	Pyrodigal	gene	1538946	1539245	.	-	.	ID=GCA000012185_01570_gene;locus_tag=GCA000012185_01570;gene=yhbY
contig_1	Pyrodigal	CDS	1538946	1539245	.	-	0	ID=GCA000012185_01570;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA000012185_01570;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA000012185_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_005650404.1,SO:0001217,UniParc:UPI000013B1CE,UniRef:UniRef100_P71376,UniRef:UniRef50_P71376,UniRef:UniRef90_P71376
contig_1	Pyrodigal	gene	1539372	1540001	.	+	.	ID=GCA000012185_01571_gene;locus_tag=GCA000012185_01571;gene=rlmE
contig_1	Pyrodigal	CDS	1539372	1540001	.	+	0	ID=GCA000012185_01571;Name=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;locus_tag=GCA000012185_01571;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;Dbxref=GO:0001510,GO:0005737,GO:0006364,GO:0008650,GO:0016436;gene=rlmE;Parent=GCA000012185_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0293,COG:J,RefSeq:WP_005688212.1,SO:0001217,UniParc:UPI000053E266,UniRef:UniRef100_Q4QKJ2,UniRef:UniRef50_P45162,UniRef:UniRef90_Q9CNJ3;ec_number=2.1.1.166
contig_1	Pyrodigal	gene	1540092	1541999	.	+	.	ID=GCA000012185_01572_gene;locus_tag=GCA000012185_01572;gene=ftsH
contig_1	Pyrodigal	CDS	1540092	1541999	.	+	0	ID=GCA000012185_01572;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA000012185_01572;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004176,GO:0004222,GO:0005524,GO:0005886,GO:0006508,GO:0008270,GO:0016887,GO:0030163;gene=ftsH;Parent=GCA000012185_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0465,COG:O,RefSeq:WP_005652795.1,SO:0001217,UniParc:UPI000039AC4B,UniRef:UniRef100_Q4QKJ1,UniRef:UniRef50_P71377,UniRef:UniRef90_P71377;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1542111	1542941	.	+	.	ID=GCA000012185_01573_gene;locus_tag=GCA000012185_01573;gene=folP
contig_1	Pyrodigal	CDS	1542111	1542941	.	+	0	ID=GCA000012185_01573;Name=dihydropteroate synthase;locus_tag=GCA000012185_01573;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0009396;gene=folP;Parent=GCA000012185_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00796,RefSeq:WP_011272586.1,SO:0001217,UniParc:UPI000053E267,UniRef:UniRef100_Q4QKJ0,UniRef:UniRef50_P43776,UniRef:UniRef90_Q4QKJ0;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	1542974	1544311	.	+	.	ID=GCA000012185_01574_gene;locus_tag=GCA000012185_01574;gene=glmM
contig_1	Pyrodigal	CDS	1542974	1544311	.	+	0	ID=GCA000012185_01574;Name=phosphoglucosamine mutase;locus_tag=GCA000012185_01574;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252,GO:0016868;gene=glmM;Parent=GCA000012185_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_011272587.1,SO:0001217,UniParc:UPI00003CD995,UniRef:UniRef100_Q4QKI9,UniRef:UniRef50_P31120,UniRef:UniRef90_P45164;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	1544370	1544864	.	+	.	ID=GCA000012185_01575_gene;locus_tag=GCA000012185_01575;gene=sixA
contig_1	Pyrodigal	CDS	1544370	1544864	.	+	0	ID=GCA000012185_01575;Name=phosphohistidine phosphatase SixA;locus_tag=GCA000012185_01575;product=phosphohistidine phosphatase SixA;Dbxref=GO:0005737,GO:0036211,GO:0101006;gene=sixA;Parent=GCA000012185_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272588.1,SO:0001217,UniParc:UPI000053E268,UniRef:UniRef100_Q4QKI8,UniRef:UniRef50_P44164,UniRef:UniRef90_Q4QKI8
contig_1	Pyrodigal	gene	1545078	1545641	.	+	.	ID=GCA000012185_01576_gene;locus_tag=GCA000012185_01576
contig_1	Pyrodigal	CDS	1545078	1545641	.	+	0	ID=GCA000012185_01576;Name=Histone;locus_tag=GCA000012185_01576;product=Histone;Parent=GCA000012185_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_041174766.1,SO:0001217,UniParc:UPI00003CDAAF,UniRef:UniRef100_Q4QKI7,UniRef:UniRef50_Q4QKI7,UniRef:UniRef90_Q4QKI7
contig_1	Pyrodigal	gene	1545719	1547083	.	-	.	ID=GCA000012185_01577_gene;locus_tag=GCA000012185_01577;gene=tdeA
contig_1	Pyrodigal	CDS	1545719	1547083	.	-	0	ID=GCA000012185_01577;Name=toxin/drug exporter TdeA;locus_tag=GCA000012185_01577;product=toxin/drug exporter TdeA;Dbxref=GO:0006811,GO:0015288,GO:0015562,GO:0016020,GO:0022857,GO:0046677,GO:0055085;gene=tdeA;Parent=GCA000012185_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1538,COG:M,RefSeq:WP_005687127.1,SO:0001217,UniParc:UPI00003CDAAE,UniRef:UniRef100_A0AAJ8WCQ5,UniRef:UniRef50_Q2EHL7,UniRef:UniRef90_P45217
contig_1	Pyrodigal	gene	1547956	1548501	.	+	.	ID=GCA000012185_01578_gene;locus_tag=GCA000012185_01578;gene=rpoE
contig_1	Pyrodigal	CDS	1547956	1548501	.	+	0	ID=GCA000012185_01578;Name=putative RNA polymerase sigma factor HI_1459;locus_tag=GCA000012185_01578;product=putative RNA polymerase sigma factor HI_1459;Dbxref=GO:0003677,GO:0006352,GO:0006355,GO:0016987;gene=rpoE;Parent=GCA000012185_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_005662388.1,SO:0001217,UniParc:UPI00014F7E24,UniRef:UniRef100_Q4QKI3,UniRef:UniRef50_P45215,UniRef:UniRef90_P45215
contig_1	Pyrodigal	gene	1548511	1548684	.	+	.	ID=GCA000012185_01579_gene;locus_tag=GCA000012185_01579
contig_1	Pyrodigal	CDS	1548511	1548684	.	+	0	ID=GCA000012185_01579;Name=RNA polymerase sigma factor;locus_tag=GCA000012185_01579;product=RNA polymerase sigma factor;Parent=GCA000012185_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650423.1,SO:0001217,UniParc:UPI00003CDD5A,UniRef:UniRef100_A0A2X1PRC2,UniRef:UniRef50_P45215,UniRef:UniRef90_A0A2X1PRC2
contig_1	Pyrodigal	gene	1548779	1549642	.	-	.	ID=GCA000012185_01580_gene;locus_tag=GCA000012185_01580;gene=eamA
contig_1	Pyrodigal	CDS	1548779	1549642	.	-	0	ID=GCA000012185_01580;Name=EamA domain-containing protein;locus_tag=GCA000012185_01580;product=EamA domain-containing protein;gene=eamA;Parent=GCA000012185_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656592.1,SO:0001217,UniParc:UPI000045E8DB,UniRef:UniRef100_Q4QKI1,UniRef:UniRef50_E6KXG7,UniRef:UniRef90_Q4QKI1
contig_1	Pyrodigal	gene	1549817	1550878	.	+	.	ID=GCA000012185_01581_gene;locus_tag=GCA000012185_01581;gene=msrB
contig_1	Pyrodigal	CDS	1549817	1550878	.	+	0	ID=GCA000012185_01581;Name=bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB;locus_tag=GCA000012185_01581;product=bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB;Dbxref=GO:0006979,GO:0008113,GO:0030091,GO:0033743,GO:0033744,GO:0036211;gene=msrB;Parent=GCA000012185_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,KEGG:K12267,RefSeq:WP_005687130.1,SO:0001217,UniParc:UPI000053E26D,UniRef:UniRef100_Q4QKI0,UniRef:UniRef50_Q9AL99,UniRef:UniRef90_P45213;ec_number=1.8.4.12
contig_1	Pyrodigal	gene	1550890	1551531	.	+	.	ID=GCA000012185_01582_gene;locus_tag=GCA000012185_01582;gene=ccdA
contig_1	Pyrodigal	CDS	1550890	1551531	.	+	0	ID=GCA000012185_01582;Name=Putative cytochrome c-type biogenesis protein HI_1454;locus_tag=GCA000012185_01582;product=Putative cytochrome c-type biogenesis protein HI_1454;Dbxref=GO:0005886,GO:0017004;gene=ccdA;Parent=GCA000012185_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG0785,RefSeq:WP_005656594.1,SO:0001217,UniParc:UPI000045E8D9,UniRef:UniRef100_A0A0D0H0V0,UniRef:UniRef50_P44202,UniRef:UniRef90_P44202
contig_1	Pyrodigal	gene	1551576	1552046	.	+	.	ID=GCA000012185_01583_gene;locus_tag=GCA000012185_01583;gene=trxA
contig_1	Pyrodigal	CDS	1551576	1552046	.	+	0	ID=GCA000012185_01583;Name=putative protein HI_1453;locus_tag=GCA000012185_01583;product=putative protein HI_1453;Dbxref=GO:0016209,GO:0016491;gene=trxA;Parent=GCA000012185_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005631815.1,SO:0001217,UniParc:UPI000053E26E,UniRef:UniRef100_A0A0H3PEK1,UniRef:UniRef50_Q57127,UniRef:UniRef90_Q57127
contig_1	Pyrodigal	gene	1552228	1552551	.	-	.	ID=GCA000012185_01584_gene;locus_tag=GCA000012185_01584;gene=yciU
contig_1	Pyrodigal	CDS	1552228	1552551	.	-	0	ID=GCA000012185_01584;Name=HI1450 family dsDNA-mimic protein;locus_tag=GCA000012185_01584;product=HI1450 family dsDNA-mimic protein;gene=yciU;Parent=GCA000012185_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3099,COG:S,RefSeq:WP_005687131.1,SO:0001217,UniParc:UPI000053E26F,UniRef:UniRef100_Q4QKH7,UniRef:UniRef50_P44199,UniRef:UniRef90_P44199
contig_1	Pyrodigal	gene	1552618	1553349	.	-	.	ID=GCA000012185_01585_gene;locus_tag=GCA000012185_01585;gene=moeB
contig_1	Pyrodigal	CDS	1552618	1553349	.	-	0	ID=GCA000012185_01585;Name=molybdopterin-synthase adenylyltransferase MoeB;locus_tag=GCA000012185_01585;product=molybdopterin-synthase adenylyltransferase MoeB;Dbxref=GO:0004792,GO:0005524,GO:0005737,GO:0005829,GO:0006777,GO:0008146,GO:0008641,GO:0016779,GO:0061605;gene=moeB;Parent=GCA000012185_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_005687132.1,SO:0001217,UniParc:UPI000053E270,UniRef:UniRef100_Q4QKH6,UniRef:UniRef50_P45211,UniRef:UniRef90_P45211;ec_number=2.7.7.80
contig_1	Pyrodigal	gene	1553353	1554567	.	-	.	ID=GCA000012185_01586_gene;locus_tag=GCA000012185_01586;gene=moeA
contig_1	Pyrodigal	CDS	1553353	1554567	.	-	0	ID=GCA000012185_01586;Name=molybdopterin molybdotransferase MoeA;locus_tag=GCA000012185_01586;product=molybdopterin molybdotransferase MoeA;Dbxref=GO:0005737,GO:0005829,GO:0006777,GO:0032324,GO:0046872,GO:0061599;gene=moeA;Parent=GCA000012185_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0303,COG:H,RefSeq:WP_005687133.1,SO:0001217,UniParc:UPI00003CDB4A,UniRef:UniRef100_Q4QKH5,UniRef:UniRef50_P45210,UniRef:UniRef90_P45210;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	1554705	1555361	.	+	.	ID=GCA000012185_01587_gene;locus_tag=GCA000012185_01587;gene=folE
contig_1	Pyrodigal	CDS	1554705	1555361	.	+	0	ID=GCA000012185_01587;Name=GTP cyclohydrolase I FolE;locus_tag=GCA000012185_01587;product=GTP cyclohydrolase I FolE;Dbxref=GO:0003934,GO:0005525,GO:0005737,GO:0006729,GO:0006730,GO:0008270,GO:0046654;gene=folE;Parent=GCA000012185_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0302,COG:H,KEGG:K01495,RefSeq:WP_005636037.1,SO:0001217,UniParc:UPI000053E271,UniRef:UniRef100_Q4QKH4,UniRef:UniRef50_P0A6T5,UniRef:UniRef90_Q4QKH4;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	1555422	1555688	.	+	.	ID=GCA000012185_01588_gene;locus_tag=GCA000012185_01588;gene=ycgL
contig_1	Pyrodigal	CDS	1555422	1555688	.	+	0	ID=GCA000012185_01588;Name=YcgL domain-containing protein NTHI1684;locus_tag=GCA000012185_01588;product=YcgL domain-containing protein NTHI1684;gene=ycgL;Parent=GCA000012185_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3100,COG:S,KEGG:K09902,RefSeq:WP_005666870.1,SO:0001217,UniParc:UPI000039AC3A,UniRef:UniRef100_Q4QKH3,UniRef:UniRef50_P44198,UniRef:UniRef90_P44198
contig_1	Pyrodigal	gene	1555791	1556519	.	+	.	ID=GCA000012185_01589_gene;locus_tag=GCA000012185_01589;gene=bioD
contig_1	Pyrodigal	CDS	1555791	1556519	.	+	0	ID=GCA000012185_01589;Name=dethiobiotin synthase;locus_tag=GCA000012185_01589;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0005829,GO:0009102;gene=bioD;Parent=GCA000012185_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_005687134.1,SO:0001217,UniParc:UPI000053E273,UniRef:UniRef100_Q4QKH2,UniRef:UniRef50_P45209,UniRef:UniRef90_P45209;ec_number=6.3.3.3
contig_1	Pyrodigal	gene	1556608	1557486	.	-	.	ID=GCA000012185_01590_gene;locus_tag=GCA000012185_01590;gene=metF
contig_1	Pyrodigal	CDS	1556608	1557486	.	-	0	ID=GCA000012185_01590;Name=methylenetetrahydrofolate reductase;locus_tag=GCA000012185_01590;product=methylenetetrahydrofolate reductase;Dbxref=GO:0004489,GO:0005829,GO:0009086,GO:0035999,GO:0071949,GO:0106312;gene=metF;Parent=GCA000012185_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_011272594.1,SO:0001217,UniParc:UPI000053E274,UniRef:UniRef100_Q4QKH1,UniRef:UniRef50_P0AEZ1,UniRef:UniRef90_P45208;ec_number=1.5.1.54
contig_1	Pyrodigal	gene	1557949	1558377	.	+	.	ID=GCA000012185_01591_gene;locus_tag=GCA000012185_01591;gene=rplM
contig_1	Pyrodigal	CDS	1557949	1558377	.	+	0	ID=GCA000012185_01591;Name=50S ribosomal protein L13;locus_tag=GCA000012185_01591;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA000012185_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,RefSeq:WP_005628896.1,SO:0001217,UniParc:UPI000039AC37,UniRef:UniRef100_Q4QKH0,UniRef:UniRef50_Q9HVY2,UniRef:UniRef90_Q4QKH0
contig_1	Pyrodigal	gene	1558394	1558786	.	+	.	ID=GCA000012185_01592_gene;locus_tag=GCA000012185_01592;gene=rpsI
contig_1	Pyrodigal	CDS	1558394	1558786	.	+	0	ID=GCA000012185_01592;Name=30S ribosomal protein S9;locus_tag=GCA000012185_01592;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA000012185_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_005631594.1,SO:0001217,UniParc:UPI000039A628,UniRef:UniRef100_Q4QKG9,UniRef:UniRef50_P31782,UniRef:UniRef90_P31782
contig_1	Pyrodigal	gene	1558967	1559605	.	+	.	ID=GCA000012185_01593_gene;locus_tag=GCA000012185_01593;gene=sspA
contig_1	Pyrodigal	CDS	1558967	1559605	.	+	0	ID=GCA000012185_01593;Name=Stringent starvation A-like protein;locus_tag=GCA000012185_01593;product=Stringent starvation A-like protein;Dbxref=GO:0005737;gene=sspA;Parent=GCA000012185_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_005656607.1,SO:0001217,UniParc:UPI000053E275,UniRef:UniRef100_A0A0H3PHQ1,UniRef:UniRef50_P45207,UniRef:UniRef90_P45207
contig_1	Pyrodigal	gene	1559605	1560057	.	+	.	ID=GCA000012185_01594_gene;locus_tag=GCA000012185_01594;gene=sspB
contig_1	Pyrodigal	CDS	1559605	1560057	.	+	0	ID=GCA000012185_01594;Name=ClpXP protease specificity-enhancing factor;locus_tag=GCA000012185_01594;product=ClpXP protease specificity-enhancing factor;Dbxref=GO:0005829,GO:0005840,GO:0045732;gene=sspB;Parent=GCA000012185_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2969,COG:O,RefSeq:WP_005650453.1,SO:0001217,UniParc:UPI0000135FED,UniRef:UniRef100_P45206,UniRef:UniRef50_P45206,UniRef:UniRef90_P45206
contig_1	Pyrodigal	gene	1560093	1561970	.	-	.	ID=GCA000012185_01595_gene;locus_tag=GCA000012185_01595;gene=dxs
contig_1	Pyrodigal	CDS	1560093	1561970	.	-	0	ID=GCA000012185_01595;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA000012185_01595;product=1-deoxy-D-xylulose-5-phosphate synthase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0008615,GO:0008661,GO:0009228,GO:0009240,GO:0016114,GO:0019288,GO:0030976,GO:0052865;gene=dxs;Parent=GCA000012185_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1154,COG:HI,KEGG:K01662,RefSeq:WP_011272595.1,SO:0001217,UniParc:UPI000053E276,UniRef:UniRef100_Q4QKG6,UniRef:UniRef50_P77488,UniRef:UniRef90_P45205;ec_number=2.2.1.7
contig_1	Pyrodigal	gene	1562012	1562902	.	-	.	ID=GCA000012185_01596_gene;locus_tag=GCA000012185_01596;gene=ispA
contig_1	Pyrodigal	CDS	1562012	1562902	.	-	0	ID=GCA000012185_01596;Name=(2E%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA000012185_01596;product=(2E%2C6E)-farnesyl diphosphate synthase;Dbxref=GO:0004337,GO:0004659,GO:0005737,GO:0008299,GO:0046872;gene=ispA;Parent=GCA000012185_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_005656611.1,SO:0001217,UniParc:UPI00003CD93B,UniRef:UniRef100_A0A0H3PEL4,UniRef:UniRef50_P45204,UniRef:UniRef90_P45204;ec_number=2.5.1.10
contig_1	Pyrodigal	gene	1562902	1563156	.	-	.	ID=GCA000012185_01597_gene;locus_tag=GCA000012185_01597;gene=xseB
contig_1	Pyrodigal	CDS	1562902	1563156	.	-	0	ID=GCA000012185_01597;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000012185_01597;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000012185_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_005656614.1,SO:0001217,UniParc:UPI00003CD93A,UniRef:UniRef100_Q4QKG4,UniRef:UniRef50_P43914,UniRef:UniRef90_P43914;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1563315	1564772	.	+	.	ID=GCA000012185_01598_gene;locus_tag=GCA000012185_01598
contig_1	Pyrodigal	CDS	1563315	1564772	.	+	0	ID=GCA000012185_01598;Name=tRNA sulfurtransferase;locus_tag=GCA000012185_01598;product=tRNA sulfurtransferase;Parent=GCA000012185_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656615.1,SO:0001217,UniParc:UPI00003CD939,UniRef:UniRef100_Q4QKG3,UniRef:UniRef90_Q4QKG3
contig_1	Pyrodigal	gene	1564787	1565107	.	+	.	ID=GCA000012185_01599_gene;locus_tag=GCA000012185_01599;gene=yqcC
contig_1	Pyrodigal	CDS	1564787	1565107	.	+	0	ID=GCA000012185_01599;Name=putative protein HI_1436;locus_tag=GCA000012185_01599;product=putative protein HI_1436;Dbxref=GO:0044010;gene=yqcC;Parent=GCA000012185_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3098,COG:S,RefSeq:WP_005656616.1,SO:0001217,UniParc:UPI00003CD938,UniRef:UniRef100_A0A0H3PE12,UniRef:UniRef50_Q57152,UniRef:UniRef90_Q57152
contig_1	Pyrodigal	gene	1565101	1565820	.	+	.	ID=GCA000012185_01600_gene;locus_tag=GCA000012185_01600;gene=truC
contig_1	Pyrodigal	CDS	1565101	1565820	.	+	0	ID=GCA000012185_01600;Name=tRNA pseudouridine(65) synthase TruC;locus_tag=GCA000012185_01600;product=tRNA pseudouridine(65) synthase TruC;Dbxref=GO:0000455,GO:0001522,GO:0003723,GO:0008033,GO:0009982,GO:0160149;gene=truC;Parent=GCA000012185_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06175,RefSeq:WP_005656617.1,SO:0001217,UniParc:UPI00003CD937,UniRef:UniRef100_A0A0H3PMF2,UniRef:UniRef50_P44197,UniRef:UniRef90_P44197;ec_number=5.4.99.26
contig_1	Pyrodigal	gene	1565813	1565971	.	+	.	ID=GCA000012185_01601_gene;locus_tag=GCA000012185_01601;gene=yoaH
contig_1	Pyrodigal	CDS	1565813	1565971	.	+	0	ID=GCA000012185_01601;Name=YoaH family protein;locus_tag=GCA000012185_01601;product=YoaH family protein;gene=yoaH;Parent=GCA000012185_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3140,COG:S,KEGG:K09917,RefSeq:WP_005656618.1,SO:0001217,UniParc:UPI000053E277,UniRef:UniRef100_Q4QKG0,UniRef:UniRef50_P56507,UniRef:UniRef90_P56507
contig_1	Pyrodigal	gene	1566120	1566338	.	+	.	ID=GCA000012185_01602_gene;locus_tag=GCA000012185_01602;gene=cspD
contig_1	Pyrodigal	CDS	1566120	1566338	.	+	0	ID=GCA000012185_01602;Name=cold shock domain-containing protein CspD;locus_tag=GCA000012185_01602;product=cold shock domain-containing protein CspD;Dbxref=GO:0003676,GO:0003677,GO:0005737,GO:0005829,GO:0006355,GO:0010468;gene=cspD;Parent=GCA000012185_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_005652728.1,SO:0001217,UniParc:UPI0000128583,UniRef:UniRef100_P46449,UniRef:UniRef50_P46449,UniRef:UniRef90_P46449
contig_1	Pyrodigal	gene	1566477	1566953	.	-	.	ID=GCA000012185_01603_gene;locus_tag=GCA000012185_01603;gene=ybaK
contig_1	Pyrodigal	CDS	1566477	1566953	.	-	0	ID=GCA000012185_01603;Name=Cys-tRNA(Pro) deacylase;locus_tag=GCA000012185_01603;product=Cys-tRNA(Pro) deacylase;Dbxref=GO:0002161,GO:0005737,GO:0006412,GO:0016829,GO:0043039,GO:0043906;gene=ybaK;Parent=GCA000012185_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,KEGG:K03976,RefSeq:WP_005631703.1,SO:0001217,UniParc:UPI000013A2B4,UniRef:UniRef100_P45202,UniRef:UniRef50_P45202,UniRef:UniRef90_P45202;ec_number=4.2.-.-
contig_1	Pyrodigal	gene	1567012	1567965	.	+	.	ID=GCA000012185_01604_gene;locus_tag=GCA000012185_01604;gene=usg
contig_1	Pyrodigal	CDS	1567012	1567965	.	+	0	ID=GCA000012185_01604;Name=oxidoreductase;locus_tag=GCA000012185_01604;product=oxidoreductase;gene=usg;Parent=GCA000012185_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,RefSeq:WP_005660359.1,SO:0001217,UniParc:UPI000053E278,UniRef:UniRef100_A0A2R3FN24,UniRef:UniRef50_P45201,UniRef:UniRef90_P45201
contig_1	Pyrodigal	gene	1568109	1568915	.	-	.	ID=GCA000012185_01605_gene;locus_tag=GCA000012185_01605
contig_1	Pyrodigal	CDS	1568109	1568915	.	-	0	ID=GCA000012185_01605;Name=Tryptophan synthase alpha chain;locus_tag=GCA000012185_01605;product=Tryptophan synthase alpha chain;Parent=GCA000012185_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005660361.1,SO:0001217,UniParc:UPI000053E279,UniRef:UniRef100_Q4QKF6,UniRef:UniRef90_Q4QKF6
contig_1	Pyrodigal	gene	1568915	1570108	.	-	.	ID=GCA000012185_01606_gene;locus_tag=GCA000012185_01606;gene=trpB
contig_1	Pyrodigal	CDS	1568915	1570108	.	-	0	ID=GCA000012185_01606;Name=tryptophan synthase subunit beta;locus_tag=GCA000012185_01606;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA000012185_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,RefSeq:WP_011272596.1,SO:0001217,UniParc:UPI000053E27A,UniRef:UniRef100_Q4QKF5,UniRef:UniRef50_P0A879,UniRef:UniRef90_A6VPD9;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1570125	1570883	.	-	.	ID=GCA000012185_01607_gene;locus_tag=GCA000012185_01607;gene=ydfG
contig_1	Pyrodigal	CDS	1570125	1570883	.	-	0	ID=GCA000012185_01607;Name=putative NADP-dependent dehydrogenase HI_1430;locus_tag=GCA000012185_01607;product=putative NADP-dependent dehydrogenase HI_1430;Dbxref=GO:0005829,GO:0016491;gene=ydfG;Parent=GCA000012185_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_005656623.1,SO:0001217,UniParc:UPI000053E27B,UniRef:UniRef100_A0A2S9S8Q7,UniRef:UniRef50_P39831,UniRef:UniRef90_P45200;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	1571063	1572097	.	+	.	ID=GCA000012185_01608_gene;locus_tag=GCA000012185_01608;gene=purM
contig_1	Pyrodigal	CDS	1571063	1572097	.	+	0	ID=GCA000012185_01608;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000012185_01608;product=Phosphoribosylformylglycinamidine cyclo-ligase;Dbxref=GO:0004637,GO:0004641,GO:0005524,GO:0005829,GO:0006164,GO:0006189,GO:0046084;gene=purM;Parent=GCA000012185_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_011272597.1,SO:0001217,UniParc:UPI00003CDC2D,UniRef:UniRef100_Q4QKF3,UniRef:UniRef50_Q83AZ0,UniRef:UniRef90_P43848;ec_number=6.3.3.1
contig_1	Pyrodigal	gene	1572152	1572790	.	+	.	ID=GCA000012185_01609_gene;locus_tag=GCA000012185_01609;gene=purN
contig_1	Pyrodigal	CDS	1572152	1572790	.	+	0	ID=GCA000012185_01609;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000012185_01609;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0004644,GO:0005737,GO:0005829,GO:0006189;gene=purN;Parent=GCA000012185_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0299,COG:F,RefSeq:WP_011272598.1,SO:0001217,UniParc:UPI000053E27C,UniRef:UniRef100_A0A2S9S8N7,UniRef:UniRef50_P43846,UniRef:UniRef90_P43846;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	1572874	1573710	.	-	.	ID=GCA000012185_01610_gene;locus_tag=GCA000012185_01610
contig_1	Pyrodigal	CDS	1572874	1573710	.	-	0	ID=GCA000012185_01610;Name=putative protein HI_1427;locus_tag=GCA000012185_01610;product=putative protein HI_1427;Parent=GCA000012185_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5266,COG:R,RefSeq:WP_011272599.1,SO:0001217,UniParc:UPI000053E27D,UniRef:UniRef100_A0A2S9S8Q2,UniRef:UniRef50_P44196,UniRef:UniRef90_P44196
contig_1	Pyrodigal	gene	1573908	1574837	.	-	.	ID=GCA000012185_01611_gene;locus_tag=GCA000012185_01611;gene=uspE
contig_1	Pyrodigal	CDS	1573908	1574837	.	-	0	ID=GCA000012185_01611;Name=universal stress protein UspE;locus_tag=GCA000012185_01611;product=universal stress protein UspE;Dbxref=GO:0005737;gene=uspE;Parent=GCA000012185_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_011272600.1,SO:0001217,UniParc:UPI00016100C5,UniRef:UniRef100_Q4QKF0,UniRef:UniRef50_P44195,UniRef:UniRef90_P44195
contig_1	Pyrodigal	gene	1574959	1575732	.	-	.	ID=GCA000012185_01612_gene;locus_tag=GCA000012185_01612;gene=fnr
contig_1	Pyrodigal	CDS	1574959	1575732	.	-	0	ID=GCA000012185_01612;Name=fumarate/nitrate reduction transcriptional regulator Fnr;locus_tag=GCA000012185_01612;product=fumarate/nitrate reduction transcriptional regulator Fnr;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0046872,GO:0051539;gene=fnr;Parent=GCA000012185_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000611911,BlastRules:WP_003243241,BlastRules:WP_005662331,COG:COG0664,COG:T,RefSeq:WP_005662331.1,SO:0001217,UniParc:UPI000012AB29,UniRef:UniRef100_P45199,UniRef:UniRef50_P0A9E5,UniRef:UniRef90_P45199
contig_1	Pyrodigal	gene	1575824	1575916	.	+	.	ID=GCA000012185_01613_gene;locus_tag=GCA000012185_01613
contig_1	Pyrodigal	CDS	1575824	1575916	.	+	0	ID=GCA000012185_01613;Name=hypothetical protein;locus_tag=GCA000012185_01613;product=hypothetical protein;Parent=GCA000012185_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00014F785A,UniRef:UniRef100_A0A158SX17,UniRef:UniRef50_A0A2X4R6S5,UniRef:UniRef90_A0A158SX17
contig_1	tRNAscan-SE	gene	1576016	1576101	.	+	.	ID=GCA000012185_01614_gene;locus_tag=GCA000012185_01614;gene=trnL
contig_1	tRNAscan-SE	tRNA	1576016	1576101	.	+	.	ID=GCA000012185_01614;Name=tRNA-Leu(caa);locus_tag=GCA000012185_01614;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000012185_01614_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	1576473	1576706	.	+	.	ID=GCA000012185_01615_gene;locus_tag=GCA000012185_01615
contig_1	Pyrodigal	CDS	1576473	1576706	.	+	0	ID=GCA000012185_01615;Name=Tyrosine-type recombinase/integrase;locus_tag=GCA000012185_01615;product=Tyrosine-type recombinase/integrase;Parent=GCA000012185_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002EAB466,UniRef:UniRef100_A0AAJ8WCT3,UniRef:UniRef50_A0AAJ8WCT3,UniRef:UniRef90_A0AAJ8WCT3
contig_1	Pyrodigal	gene	1576591	1576980	.	-	.	ID=GCA000012185_01616_gene;locus_tag=GCA000012185_01616
contig_1	Pyrodigal	CDS	1576591	1576980	.	-	0	ID=GCA000012185_01616;Name=DNA-binding protein;locus_tag=GCA000012185_01616;product=DNA-binding protein;Parent=GCA000012185_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E27F,UniRef:UniRef100_A0AAJ8WRV1,UniRef:UniRef50_A0A1V3L5A3,UniRef:UniRef90_A0AAJ8WRV1
contig_1	Pyrodigal	gene	1577285	1577536	.	-	.	ID=GCA000012185_01617_gene;locus_tag=GCA000012185_01617
contig_1	Pyrodigal	CDS	1577285	1577536	.	-	0	ID=GCA000012185_01617;Name=Phage antirepressor Ant;locus_tag=GCA000012185_01617;product=Phage antirepressor Ant;Parent=GCA000012185_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07741,RefSeq:WP_011272603.1,SO:0001217,UniParc:UPI000053E280,UniRef:UniRef100_A0A2S9S8P9,UniRef:UniRef50_A0A2S9S8P9,UniRef:UniRef90_A0A2S9S8P9
contig_1	Infernal	gene	1577589	1577676	.	-	.	ID=GCA000012185_01618_gene;locus_tag=GCA000012185_01618;gene=C4
contig_1	Infernal	ncRNA	1577589	1577676	2.5e-10	-	.	ID=GCA000012185_01618;Name=C4 antisense RNA;locus_tag=GCA000012185_01618;product=C4 antisense RNA;Dbxref=RFAM:RF01695;Parent=GCA000012185_01618_gene;Note=SO:0000644;ncRNA_class=antisense_RNA;inference=profile:Rfam:RF01695
contig_1	Pyrodigal	gene	1577874	1579145	.	-	.	ID=GCA000012185_01619_gene;locus_tag=GCA000012185_01619
contig_1	Pyrodigal	CDS	1577874	1579145	.	-	0	ID=GCA000012185_01619;Name=Chromosome partition protein Smc;locus_tag=GCA000012185_01619;product=Chromosome partition protein Smc;Parent=GCA000012185_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005666905.1,SO:0001217,UniParc:UPI000053E281,UniRef:UniRef100_A0A1Q5Y299,UniRef:UniRef50_A0A1Q5Y299,UniRef:UniRef90_A0A1Q5Y299
contig_1	Pyrodigal	gene	1579746	1579949	.	+	.	ID=GCA000012185_01620_gene;locus_tag=GCA000012185_01620
contig_1	Pyrodigal	CDS	1579746	1579949	.	+	0	ID=GCA000012185_01620;Name=hypothetical protein;locus_tag=GCA000012185_01620;product=hypothetical protein;Parent=GCA000012185_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650497.1,SO:0001217,UniParc:UPI000039AC21,UniRef:UniRef100_A0A1Q5Y2G4,UniRef:UniRef50_A0A1Q5Y2G4,UniRef:UniRef90_A0A1Q5Y2G4
contig_1	Pyrodigal	gene	1579927	1580085	.	-	.	ID=GCA000012185_01621_gene;locus_tag=GCA000012185_01621
contig_1	Pyrodigal	CDS	1579927	1580085	.	-	0	ID=GCA000012185_01621;Name=hypothetical protein;locus_tag=GCA000012185_01621;product=hypothetical protein;Parent=GCA000012185_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650499.1,SO:0001217,UniParc:UPI000039AC20,UniRef:UniRef100_A0A2S9S8P4,UniRef:UniRef50_A0A380TZK4,UniRef:UniRef90_A0A2S9S8P4
contig_1	Pyrodigal	gene	1580413	1580634	.	-	.	ID=GCA000012185_01622_gene;locus_tag=GCA000012185_01622
contig_1	Pyrodigal	CDS	1580413	1580634	.	-	0	ID=GCA000012185_01622;Name=hypothetical protein;locus_tag=GCA000012185_01622;product=hypothetical protein;Parent=GCA000012185_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650500.1,SO:0001217,UniParc:UPI000039AC1F,UniRef:UniRef100_A0A1Q5Y2A1,UniRef:UniRef50_F4H934,UniRef:UniRef90_A0A1Q5Y2A1
contig_1	Pyrodigal	gene	1580649	1580819	.	+	.	ID=GCA000012185_01623_gene;locus_tag=GCA000012185_01623;gene=yegP
contig_1	Pyrodigal	CDS	1580649	1580819	.	+	0	ID=GCA000012185_01623;Name=DUF1508 domain-containing protein;locus_tag=GCA000012185_01623;product=DUF1508 domain-containing protein;gene=yegP;Parent=GCA000012185_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3422,COG:S,RefSeq:WP_005650502.1,SO:0001217,UniParc:UPI00014F7CEF,UniRef:UniRef100_A0A158SX08,UniRef:UniRef50_B8F4N3,UniRef:UniRef90_A0A158SX08
contig_1	Pyrodigal	gene	1581133	1581564	.	-	.	ID=GCA000012185_01624_gene;locus_tag=GCA000012185_01624
contig_1	Pyrodigal	CDS	1581133	1581564	.	-	0	ID=GCA000012185_01624;Name=hypothetical protein;locus_tag=GCA000012185_01624;product=hypothetical protein;Parent=GCA000012185_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_038441203.1,SO:0001217,UniParc:UPI0005716611,UniRef:UniRef100_A0A2S9S8L9,UniRef:UniRef50_A0A0M1GQ53,UniRef:UniRef90_A0A2S9S8L9
contig_1	Pyrodigal	gene	1581561	1581896	.	-	.	ID=GCA000012185_01625_gene;locus_tag=GCA000012185_01625
contig_1	Pyrodigal	CDS	1581561	1581896	.	-	0	ID=GCA000012185_01625;Name=DUF4325 domain-containing protein;locus_tag=GCA000012185_01625;product=DUF4325 domain-containing protein;Parent=GCA000012185_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005666912.1,SO:0001217,UniParc:UPI000039AC1D,UniRef:UniRef100_A0A2S9S8M6,UniRef:UniRef50_A0A0M1GPN0,UniRef:UniRef90_A0A0M1GPN0
contig_1	Pyrodigal	gene	1581899	1582978	.	-	.	ID=GCA000012185_01626_gene;locus_tag=GCA000012185_01626
contig_1	Pyrodigal	CDS	1581899	1582978	.	-	0	ID=GCA000012185_01626;Name=ATP-binding protein;locus_tag=GCA000012185_01626;product=ATP-binding protein;Parent=GCA000012185_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272604.1,SO:0001217,UniParc:UPI000053E282,UniRef:UniRef100_A0A2S9S8N6,UniRef:UniRef50_K0G3J5,UniRef:UniRef90_A0A2S9S8N6
contig_1	Pyrodigal	gene	1583030	1583728	.	-	.	ID=GCA000012185_01627_gene;locus_tag=GCA000012185_01627
contig_1	Pyrodigal	CDS	1583030	1583728	.	-	0	ID=GCA000012185_01627;Name=Helix-turn-helix transcriptional regulator;locus_tag=GCA000012185_01627;product=Helix-turn-helix transcriptional regulator;Parent=GCA000012185_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2932,COG:X,RefSeq:WP_005650509.1,SO:0001217,UniParc:UPI000039AC1B,UniRef:UniRef100_A0A2S9S8M0,UniRef:UniRef50_C6AM31,UniRef:UniRef90_A0A2S9S8M0
contig_1	Pyrodigal	gene	1583839	1584027	.	+	.	ID=GCA000012185_01628_gene;locus_tag=GCA000012185_01628;gene=ydaS
contig_1	Pyrodigal	CDS	1583839	1584027	.	+	0	ID=GCA000012185_01628;Name=DNA-binding protein;locus_tag=GCA000012185_01628;product=DNA-binding protein;gene=ydaS;Parent=GCA000012185_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4197,COG:K,KEGG:K22302,RefSeq:WP_005650512.1,SO:0001217,UniParc:UPI000039AC1A,UniRef:UniRef100_A0A1Q5Y2B3,UniRef:UniRef50_A0A095YQ03,UniRef:UniRef90_A0A5D0EJ46
contig_1	Pyrodigal	gene	1584076	1584516	.	+	.	ID=GCA000012185_01629_gene;locus_tag=GCA000012185_01629;gene=ymfL
contig_1	Pyrodigal	CDS	1584076	1584516	.	+	0	ID=GCA000012185_01629;Name=YmfL family putative regulatory protein;locus_tag=GCA000012185_01629;product=YmfL family putative regulatory protein;gene=ymfL;Parent=GCA000012185_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272605.1,SO:0001217,UniParc:UPI00003CDCA6,UniRef:UniRef100_A0A346KB84,UniRef:UniRef50_A0A0M1GQ47,UniRef:UniRef90_A0A0M1GQ47
contig_1	Pyrodigal	gene	1584565	1585239	.	+	.	ID=GCA000012185_01630_gene;locus_tag=GCA000012185_01630
contig_1	Pyrodigal	CDS	1584565	1585239	.	+	0	ID=GCA000012185_01630;Name=Antirepressor protein C-terminal domain-containing protein;locus_tag=GCA000012185_01630;product=Antirepressor protein C-terminal domain-containing protein;Parent=GCA000012185_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272606.1,SO:0001217,UniParc:UPI000053E283,UniRef:UniRef100_A0A0D0HTW7,UniRef:UniRef50_A0A502JUD3,UniRef:UniRef90_A0A502JUD3
contig_1	Pyrodigal	gene	1585236	1585994	.	+	.	ID=GCA000012185_01631_gene;locus_tag=GCA000012185_01631
contig_1	Pyrodigal	CDS	1585236	1585994	.	+	0	ID=GCA000012185_01631;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000012185_01631;product=Helix-turn-helix domain-containing protein;Parent=GCA000012185_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272607.1,SO:0001217,UniParc:UPI000053E284,UniRef:UniRef100_Q4QKD5,UniRef:UniRef50_Q4QKX5,UniRef:UniRef90_Q4QKD5
contig_1	Pyrodigal	gene	1585979	1586620	.	+	.	ID=GCA000012185_01632_gene;locus_tag=GCA000012185_01632
contig_1	Pyrodigal	CDS	1585979	1586620	.	+	0	ID=GCA000012185_01632;Name=Replication P;locus_tag=GCA000012185_01632;product=Replication P;Parent=GCA000012185_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272608.1,SO:0001217,UniParc:UPI000053E285,UniRef:UniRef100_Q4QKD4,UniRef:UniRef50_Q4QKD4,UniRef:UniRef90_Q4QKD4
contig_1	Pyrodigal	gene	1586617	1586841	.	+	.	ID=GCA000012185_01633_gene;locus_tag=GCA000012185_01633
contig_1	Pyrodigal	CDS	1586617	1586841	.	+	0	ID=GCA000012185_01633;Name=hypothetical protein;locus_tag=GCA000012185_01633;product=hypothetical protein;Parent=GCA000012185_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005633909.1,SO:0001217,UniParc:UPI000053E286,UniRef:UniRef100_A0A0H3PD46,UniRef:UniRef90_A5UER7
contig_1	Pyrodigal	gene	1586878	1587294	.	+	.	ID=GCA000012185_01634_gene;locus_tag=GCA000012185_01634;gene=ninB
contig_1	Pyrodigal	CDS	1586878	1587294	.	+	0	ID=GCA000012185_01634;Name=Recombination protein NinB;locus_tag=GCA000012185_01634;product=Recombination protein NinB;gene=ninB;Parent=GCA000012185_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272609.1,SO:0001217,UniParc:UPI000053E287,UniRef:UniRef100_Q4QKD2,UniRef:UniRef50_Q7Y5V7,UniRef:UniRef90_Q4QKD2
contig_1	Pyrodigal	gene	1587387	1587608	.	+	.	ID=GCA000012185_01635_gene;locus_tag=GCA000012185_01635;gene=ninG
contig_1	Pyrodigal	CDS	1587387	1587608	.	+	0	ID=GCA000012185_01635;Name=Recombination protein NinG;locus_tag=GCA000012185_01635;product=Recombination protein NinG;gene=ninG;Parent=GCA000012185_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000E5FFF1,UniRef:UniRef100_A0AAJ8WRT5,UniRef:UniRef50_A0AAJ8WRT5,UniRef:UniRef90_A0AAJ8WRT5
contig_1	Pyrodigal	gene	1587935	1588600	.	+	.	ID=GCA000012185_01636_gene;locus_tag=GCA000012185_01636
contig_1	Pyrodigal	CDS	1587935	1588600	.	+	0	ID=GCA000012185_01636;Name=HNH endonuclease;locus_tag=GCA000012185_01636;product=HNH endonuclease;Parent=GCA000012185_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_038441185.1,SO:0001217,UniParc:UPI00030B5F48,UniRef:UniRef100_A0A2S9S4Z1,UniRef:UniRef50_A5UER3,UniRef:UniRef90_A5UER3
contig_1	Pyrodigal	gene	1588631	1589002	.	+	.	ID=GCA000012185_01637_gene;locus_tag=GCA000012185_01637
contig_1	Pyrodigal	CDS	1588631	1589002	.	+	0	ID=GCA000012185_01637;Name=Phage antitermination protein Q;locus_tag=GCA000012185_01637;product=Phage antitermination protein Q;Parent=GCA000012185_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005650528.1,SO:0001217,UniParc:UPI000039AC11,UniRef:UniRef100_A0A2S9S4Q9,UniRef:UniRef50_A0A2S9S4Q9,UniRef:UniRef90_A0A2S9S4Q9
contig_1	Pyrodigal	gene	1589052	1590017	.	-	.	ID=GCA000012185_01638_gene;locus_tag=GCA000012185_01638
contig_1	Pyrodigal	CDS	1589052	1590017	.	-	0	ID=GCA000012185_01638;Name=Bacteriophage Mx8 p63 C-terminal domain-containing protein;locus_tag=GCA000012185_01638;product=Bacteriophage Mx8 p63 C-terminal domain-containing protein;Parent=GCA000012185_01638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005666914.1,SO:0001217,UniParc:UPI000039AC10,UniRef:UniRef100_Q4QKC8,UniRef:UniRef50_Q6H9X0,UniRef:UniRef90_Q4QKC8
contig_1	Infernal	gene	1590260	1590343	.	+	.	ID=GCA000012185_01639_gene;locus_tag=GCA000012185_01639;gene=sRNA-Xcc1
contig_1	Infernal	ncRNA	1590260	1590343	5.3e-11	+	.	ID=GCA000012185_01639;Name=sRNA-Xcc1;locus_tag=GCA000012185_01639;product=sRNA-Xcc1;Dbxref=RFAM:RF02221;Parent=GCA000012185_01639_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02221
contig_1	Pyrodigal	gene	1590375	1591043	.	+	.	ID=GCA000012185_01640_gene;locus_tag=GCA000012185_01640
contig_1	Pyrodigal	CDS	1590375	1591043	.	+	0	ID=GCA000012185_01640;Name=Bro-N domain-containing protein;locus_tag=GCA000012185_01640;product=Bro-N domain-containing protein;Parent=GCA000012185_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3617,COG:X,RefSeq:WP_038441183.1,SO:0001217,UniParc:UPI00003CDC8B,UniRef:UniRef100_Q4QKC7,UniRef:UniRef50_W0QAS6,UniRef:UniRef90_Q4QKC7
contig_1	Pyrodigal	gene	1591119	1591256	.	+	.	ID=GCA000012185_01641_gene;locus_tag=GCA000012185_01641
contig_1	Pyrodigal	CDS	1591119	1591256	.	+	0	ID=GCA000012185_01641;Name=hypothetical protein;locus_tag=GCA000012185_01641;product=hypothetical protein;Parent=GCA000012185_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015702297.1,SO:0001217,UniParc:UPI0001DDD253,UniRef:UniRef100_Q4QKC6,UniRef:UniRef50_Q4QKC6,UniRef:UniRef90_Q4QKC6
contig_1	Pyrodigal	gene	1591380	1591736	.	+	.	ID=GCA000012185_01642_gene;locus_tag=GCA000012185_01642;gene=chiW
contig_1	Pyrodigal	CDS	1591380	1591736	.	+	0	ID=GCA000012185_01642;Name=phage holin%2C lambda family;locus_tag=GCA000012185_01642;product=phage holin%2C lambda family;Dbxref=GO:0019835;gene=chiW;Parent=GCA000012185_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6077,COG:U,RefSeq:WP_005650535.1,SO:0001217,UniParc:UPI000013AA90,UniRef:UniRef100_P44188,UniRef:UniRef50_P44188,UniRef:UniRef90_P44188
contig_1	Pyrodigal	gene	1591705	1592307	.	+	.	ID=GCA000012185_01643_gene;locus_tag=GCA000012185_01643;gene=gH19
contig_1	Pyrodigal	CDS	1591705	1592307	.	+	0	ID=GCA000012185_01643;Name=Glycosyl hydrolase family 19 domain-containing protein HI-1415;locus_tag=GCA000012185_01643;product=Glycosyl hydrolase family 19 domain-containing protein HI-1415;Dbxref=GO:0004568,GO:0006032,GO:0016998;gene=gH19;Parent=GCA000012185_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3179,COG:G,RefSeq:WP_032826234.1,SO:0001217,UniParc:UPI0000E601DC,UniRef:UniRef100_A0A2S9S4N9,UniRef:UniRef50_P44187,UniRef:UniRef90_P44187
contig_1	Pyrodigal	gene	1592300	1592623	.	+	.	ID=GCA000012185_01644_gene;locus_tag=GCA000012185_01644;gene=chiY
contig_1	Pyrodigal	CDS	1592300	1592623	.	+	0	ID=GCA000012185_01644;Name=DUF2570 domain-containing protein;locus_tag=GCA000012185_01644;product=DUF2570 domain-containing protein;gene=chiY;Parent=GCA000012185_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6079,COG:U,RefSeq:WP_011272617.1,SO:0001217,UniParc:UPI000053E28F,UniRef:UniRef100_A0AAJ8WCS5,UniRef:UniRef50_A0A0M1GPF4,UniRef:UniRef90_A0AAJ8WCS5
contig_1	Pyrodigal	gene	1592818	1593096	.	-	.	ID=GCA000012185_01645_gene;locus_tag=GCA000012185_01645;gene=hipB
contig_1	Pyrodigal	CDS	1592818	1593096	.	-	0	ID=GCA000012185_01645;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000012185_01645;product=Helix-turn-helix domain-containing protein;gene=hipB;Parent=GCA000012185_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1396,COG:K,RefSeq:WP_011272618.1,SO:0001217,UniParc:UPI00003CDAF3,UniRef:UniRef100_A0A1Q5Y2G1,UniRef:UniRef50_A0A657K110,UniRef:UniRef90_A0A1Q5Y2G1
contig_1	Pyrodigal	gene	1593141	1593653	.	+	.	ID=GCA000012185_01646_gene;locus_tag=GCA000012185_01646
contig_1	Pyrodigal	CDS	1593141	1593653	.	+	0	ID=GCA000012185_01646;Name=Terminase small subunit;locus_tag=GCA000012185_01646;product=Terminase small subunit;Parent=GCA000012185_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272619.1,SO:0001217,UniParc:UPI00003CDAF4,UniRef:UniRef100_A0A2R3G4I9,UniRef:UniRef50_Q57374,UniRef:UniRef90_A4NYA7
contig_1	Pyrodigal	gene	1593640	1594983	.	+	.	ID=GCA000012185_01647_gene;locus_tag=GCA000012185_01647;gene=xtmB
contig_1	Pyrodigal	CDS	1593640	1594983	.	+	0	ID=GCA000012185_01647;Name=PBSX family phage terminase large subunit;locus_tag=GCA000012185_01647;product=PBSX family phage terminase large subunit;gene=xtmB;Parent=GCA000012185_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1783,COG:X,KEGG:K06909,RefSeq:WP_011272620.1,SO:0001217,UniParc:UPI000053E290,UniRef:UniRef100_A0AAJ8WRU1,UniRef:UniRef50_P44184,UniRef:UniRef90_P44184
contig_1	Pyrodigal	gene	1594985	1596319	.	+	.	ID=GCA000012185_01648_gene;locus_tag=GCA000012185_01648
contig_1	Pyrodigal	CDS	1594985	1596319	.	+	0	ID=GCA000012185_01648;Name=putative protein HI_1409;locus_tag=GCA000012185_01648;product=putative protein HI_1409;Parent=GCA000012185_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3567,COG:S,KEGG:K09961,RefSeq:WP_011272621.1,SO:0001217,UniParc:UPI000053E291,UniRef:UniRef100_A0A2S9R6F0,UniRef:UniRef50_P44183,UniRef:UniRef90_P44183
contig_1	Pyrodigal	gene	1596348	1597529	.	+	.	ID=GCA000012185_01649_gene;locus_tag=GCA000012185_01649
contig_1	Pyrodigal	CDS	1596348	1597529	.	+	0	ID=GCA000012185_01649;Name=NAD(+)--protein-arginine ADP-ribosyltransferase;locus_tag=GCA000012185_01649;product=NAD(+)--protein-arginine ADP-ribosyltransferase;Parent=GCA000012185_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2369,COG:X,RefSeq:WP_011272622.1,SO:0001217,UniParc:UPI00003CDC37,UniRef:UniRef100_A0A3E1QKQ2,UniRef:UniRef50_P71385,UniRef:UniRef90_A5UEQ1
contig_1	Pyrodigal	gene	1597675	1597851	.	+	.	ID=GCA000012185_01650_gene;locus_tag=GCA000012185_01650
contig_1	Pyrodigal	CDS	1597675	1597851	.	+	0	ID=GCA000012185_01650;Name=putative protein HI_1405;locus_tag=GCA000012185_01650;product=putative protein HI_1405;Parent=GCA000012185_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09960,SO:0001217,UniParc:UPI000039AC06,UniRef:UniRef100_A0A2R3G3V2,UniRef:UniRef50_P44180,UniRef:UniRef90_P44180
contig_1	Pyrodigal	gene	1598015	1599034	.	+	.	ID=GCA000012185_01651_gene;locus_tag=GCA000012185_01651;gene=pyrD
contig_1	Pyrodigal	CDS	1598015	1599034	.	+	0	ID=GCA000012185_01651;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000012185_01651;product=quinone-dependent dihydroorotate dehydrogenase;Dbxref=GO:0004152,GO:0005737,GO:0005886,GO:0006207,GO:0006222,GO:0009220,GO:0016020,GO:0044205,GO:0106430;gene=pyrD;Parent=GCA000012185_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_005656693.1,SO:0001217,UniParc:UPI000053E292,UniRef:UniRef100_Q4QKB5,UniRef:UniRef50_Q8ZG91,UniRef:UniRef90_P45477;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	1599034	1599858	.	+	.	ID=GCA000012185_01652_gene;locus_tag=GCA000012185_01652;gene=rnm
contig_1	Pyrodigal	CDS	1599034	1599858	.	+	0	ID=GCA000012185_01652;Name=RNase RNM;locus_tag=GCA000012185_01652;product=RNase RNM;Dbxref=GO:0000166,GO:0004534,GO:0006364,GO:0035312,GO:0046872,GO:0097657;gene=rnm;Parent=GCA000012185_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0613,COG:F,RefSeq:WP_005656695.1,SO:0001217,UniParc:UPI00003CD948,UniRef:UniRef100_A0AB37B7Q3,UniRef:UniRef50_P44176,UniRef:UniRef90_P44176;ec_number=3.1.3.97
contig_1	Pyrodigal	gene	1599957	1600565	.	-	.	ID=GCA000012185_01653_gene;locus_tag=GCA000012185_01653
contig_1	Pyrodigal	CDS	1599957	1600565	.	-	0	ID=GCA000012185_01653;Name=putative protein HI_1399;locus_tag=GCA000012185_01653;product=putative protein HI_1399;Parent=GCA000012185_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656697.1,SO:0001217,UniParc:UPI000013A8E0,UniRef:UniRef100_P44175,UniRef:UniRef50_P44175,UniRef:UniRef90_P44175
contig_1	Pyrodigal	gene	1600693	1602087	.	-	.	ID=GCA000012185_01654_gene;locus_tag=GCA000012185_01654;gene=fumC
contig_1	Pyrodigal	CDS	1600693	1602087	.	-	0	ID=GCA000012185_01654;Name=class II fumarate hydratase;locus_tag=GCA000012185_01654;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA000012185_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_005687184.1,SO:0001217,UniParc:UPI00003CD945,UniRef:UniRef100_A0A0Y7JPF6,UniRef:UniRef50_Q9ZCQ4,UniRef:UniRef90_P71384;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1602237	1603175	.	-	.	ID=GCA000012185_01655_gene;locus_tag=GCA000012185_01655;gene=rfaJ
contig_1	Pyrodigal	CDS	1602237	1603175	.	-	0	ID=GCA000012185_01655;Name=Fumarate hydratase;locus_tag=GCA000012185_01655;product=Fumarate hydratase;gene=rfaJ;Parent=GCA000012185_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1442,COG:M,RefSeq:WP_011272623.1,SO:0001217,UniParc:UPI000053E293,UniRef:UniRef100_Q4QKB1,UniRef:UniRef50_A0A0H3PMK3,UniRef:UniRef90_A0A0H3PMK3
contig_1	Pyrodigal	gene	1603555	1603728	.	+	.	ID=GCA000012185_01656_gene;locus_tag=GCA000012185_01656
contig_1	Pyrodigal	CDS	1603555	1603728	.	+	0	ID=GCA000012185_01656;Name=Aspartate-semialdehyde dehydrogenase;locus_tag=GCA000012185_01656;product=Aspartate-semialdehyde dehydrogenase;Parent=GCA000012185_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00014F78C8,UniRef:UniRef100_A0A0H3PER1,UniRef:UniRef50_A0A0H3PER1,UniRef:UniRef90_A0A0H3PER1
contig_1	Pyrodigal	gene	1603831	1604265	.	+	.	ID=GCA000012185_01657_gene;locus_tag=GCA000012185_01657;gene=holC
contig_1	Pyrodigal	CDS	1603831	1604265	.	+	0	ID=GCA000012185_01657;Name=DNA polymerase III subunit chi;locus_tag=GCA000012185_01657;product=DNA polymerase III subunit chi;Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0032298;gene=holC;Parent=GCA000012185_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2927,COG:L,RefSeq:WP_005656707.1,SO:0001217,UniParc:UPI00003CDD02,UniRef:UniRef100_A0A0H3PD68,UniRef:UniRef50_P43749,UniRef:UniRef90_P43749;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1604350	1604520	.	+	.	ID=GCA000012185_01658_gene;locus_tag=GCA000012185_01658
contig_1	Pyrodigal	CDS	1604350	1604520	.	+	0	ID=GCA000012185_01658;Name=putative protein HI_1396;locus_tag=GCA000012185_01658;product=putative protein HI_1396;Parent=GCA000012185_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656709.1,SO:0001217,UniParc:UPI00003CDD01,UniRef:UniRef100_A0A0H3PHV9,UniRef:UniRef50_P44174,UniRef:UniRef90_P44174
contig_1	Pyrodigal	gene	1604533	1604907	.	+	.	ID=GCA000012185_01659_gene;locus_tag=GCA000012185_01659
contig_1	Pyrodigal	CDS	1604533	1604907	.	+	0	ID=GCA000012185_01659;Name=putative protein HI_1395;locus_tag=GCA000012185_01659;product=putative protein HI_1395;Dbxref=GO:0005524,GO:0016301;Parent=GCA000012185_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4185,COG:R,RefSeq:WP_005656712.1,SO:0001217,UniParc:UPI000053E294,UniRef:UniRef100_A0A0H3PE43,UniRef:UniRef50_P44173,UniRef:UniRef90_P44173
contig_1	Pyrodigal	gene	1605129	1605443	.	+	.	ID=GCA000012185_01660_gene;locus_tag=GCA000012185_01660;gene=yqfB
contig_1	Pyrodigal	CDS	1605129	1605443	.	+	0	ID=GCA000012185_01660;Name=N(4)-acetylcytidine aminohydrolase;locus_tag=GCA000012185_01660;product=N(4)-acetylcytidine aminohydrolase;Dbxref=GO:0005829,GO:0016813,GO:0106251;gene=yqfB;Parent=GCA000012185_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3097,COG:F,KEGG:K09900,RefSeq:WP_005656716.1,SO:0001217,UniParc:UPI000053E296,UniRef:UniRef100_Q4QKA6,UniRef:UniRef50_A8GFL3,UniRef:UniRef90_Q4QKA6;ec_number=3.5.1.135
contig_1	Pyrodigal	gene	1605487	1605888	.	+	.	ID=GCA000012185_01661_gene;locus_tag=GCA000012185_01661
contig_1	Pyrodigal	CDS	1605487	1605888	.	+	0	ID=GCA000012185_01661;Name=hypothetical protein;locus_tag=GCA000012185_01661;product=hypothetical protein;Parent=GCA000012185_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005656718.1,SO:0001217,UniParc:UPI00003CD7A7,UniRef:UniRef100_A0A0H3PD73,UniRef:UniRef50_A0A0H3PD73,UniRef:UniRef90_A0A0H3PD73
contig_1	Pyrodigal	gene	1605940	1608804	.	+	.	ID=GCA000012185_01662_gene;locus_tag=GCA000012185_01662;gene=valS
contig_1	Pyrodigal	CDS	1605940	1608804	.	+	0	ID=GCA000012185_01662;Name=valine--tRNA ligase;locus_tag=GCA000012185_01662;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004832,GO:0005524,GO:0005829,GO:0006438;gene=valS;Parent=GCA000012185_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,KEGG:K01873,RefSeq:WP_011272624.1,SO:0001217,UniParc:UPI000053E297,UniRef:UniRef100_Q4QKA4,UniRef:UniRef50_P07118,UniRef:UniRef90_P43834;ec_number=6.1.1.9
contig_1	Pyrodigal	gene	1608839	1608946	.	-	.	ID=GCA000012185_01663_gene;locus_tag=GCA000012185_01663;gene=hybG
contig_1	Pyrodigal	CDS	1608839	1608946	.	-	0	ID=GCA000012185_01663;Name=hydrogenase maturation factor HybG;locus_tag=GCA000012185_01663;product=hydrogenase maturation factor HybG;gene=hybG;Parent=GCA000012185_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E298,UniRef:UniRef100_Q4QKA3,UniRef:UniRef50_P20927,UniRef:UniRef90_A0A0M3FYV1
contig_1	Pyrodigal	gene	1608933	1609103	.	-	.	ID=GCA000012185_01664_gene;locus_tag=GCA000012185_01664
contig_1	Pyrodigal	CDS	1608933	1609103	.	-	0	ID=GCA000012185_01664;Name=HypC/HybG/HupF family hydrogenase formation chaperone;locus_tag=GCA000012185_01664;product=HypC/HybG/HupF family hydrogenase formation chaperone;Parent=GCA000012185_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031A3824,UniRef:UniRef100_UPI00031A3824,UniRef:UniRef50_A0A158SWY6,UniRef:UniRef90_UPI00031A3824
contig_1	Pyrodigal	gene	1609234	1610667	.	-	.	ID=GCA000012185_01665_gene;locus_tag=GCA000012185_01665;gene=trpF
contig_1	Pyrodigal	CDS	1609234	1610667	.	-	0	ID=GCA000012185_01665;Name=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;locus_tag=GCA000012185_01665;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpF;Parent=GCA000012185_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0135,COG:E,KEGG:K13498,SO:0001217,UniParc:UPI00003CD7A2,UniRef:UniRef100_Q4QKA2,UniRef:UniRef50_P00909,UniRef:UniRef90_P46451;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1610705	1611706	.	-	.	ID=GCA000012185_01666_gene;locus_tag=GCA000012185_01666;gene=trpD
contig_1	Pyrodigal	CDS	1610705	1611706	.	-	0	ID=GCA000012185_01666;Name=Anthranilate phosphoribosyltransferase;locus_tag=GCA000012185_01666;product=Anthranilate phosphoribosyltransferase;Dbxref=GO:0000162,GO:0000287,GO:0004048,GO:0005829;gene=trpD;Parent=GCA000012185_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,KEGG:K00766,RefSeq:WP_005687194.1,SO:0001217,UniParc:UPI000053E299,UniRef:UniRef100_Q4QKA1,UniRef:UniRef50_Q8ZEG7,UniRef:UniRef90_P43858;ec_number=2.4.2.18
contig_1	Pyrodigal	gene	1611759	1612145	.	-	.	ID=GCA000012185_01667_gene;locus_tag=GCA000012185_01667
contig_1	Pyrodigal	CDS	1611759	1612145	.	-	0	ID=GCA000012185_01667;Name=putative protein HI_1388-1;locus_tag=GCA000012185_01667;product=putative protein HI_1388-1;Parent=GCA000012185_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005662273.1,SO:0001217,UniParc:UPI000039A6FA,UniRef:UniRef100_A0A0D0INA9,UniRef:UniRef50_O86237,UniRef:UniRef90_O86237
contig_1	Pyrodigal	gene	1612194	1612781	.	-	.	ID=GCA000012185_01668_gene;locus_tag=GCA000012185_01668;gene=trpG
contig_1	Pyrodigal	CDS	1612194	1612781	.	-	0	ID=GCA000012185_01668;Name=Anthranilate synthase component 2;locus_tag=GCA000012185_01668;product=Anthranilate synthase component 2;Dbxref=GO:0000162,GO:0002047,GO:0004048,GO:0004049;gene=trpG;Parent=GCA000012185_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_005687195.1,SO:0001217,UniParc:UPI00003CD79F,UniRef:UniRef100_A0A2R3GJG8,UniRef:UniRef50_P71381,UniRef:UniRef90_P71381;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1612794	1614350	.	-	.	ID=GCA000012185_01669_gene;locus_tag=GCA000012185_01669;gene=trpE
contig_1	Pyrodigal	CDS	1612794	1614350	.	-	0	ID=GCA000012185_01669;Name=anthranilate synthase component I;locus_tag=GCA000012185_01669;product=anthranilate synthase component I;Dbxref=GO:0000162,GO:0004049,GO:0046872;gene=trpE;Parent=GCA000012185_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_005687196.1,SO:0001217,UniParc:UPI00003CD79E,UniRef:UniRef100_A0A2R3GPV6,UniRef:UniRef50_P22099,UniRef:UniRef90_P43761;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1614452	1615216	.	-	.	ID=GCA000012185_01670_gene;locus_tag=GCA000012185_01670
contig_1	Pyrodigal	CDS	1614452	1615216	.	-	0	ID=GCA000012185_01670;Name=Putative glycosyltransferase 1;locus_tag=GCA000012185_01670;product=Putative glycosyltransferase 1;Parent=GCA000012185_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688459.1,SO:0001217,UniParc:UPI0001A3F44A,UniRef:UniRef100_A0A2R3GJJ1,UniRef:UniRef50_N0BKC7,UniRef:UniRef90_N0BKC7
contig_1	Pyrodigal	gene	1615485	1615982	.	-	.	ID=GCA000012185_01671_gene;locus_tag=GCA000012185_01671;gene=ftnA
contig_1	Pyrodigal	CDS	1615485	1615982	.	-	0	ID=GCA000012185_01671;Name=non-heme ferritin;locus_tag=GCA000012185_01671;product=non-heme ferritin;Dbxref=GO:0004322,GO:0005737,GO:0005829,GO:0006826,GO:0006879,GO:0008198,GO:0008199;gene=ftnA;Parent=GCA000012185_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,RefSeq:WP_005656740.1,SO:0001217,UniParc:UPI000053E29A,UniRef:UniRef100_A0A0H3PD81,UniRef:UniRef50_P43708,UniRef:UniRef90_P43708;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	1615998	1616486	.	-	.	ID=GCA000012185_01672_gene;locus_tag=GCA000012185_01672;gene=ftnA
contig_1	Pyrodigal	CDS	1615998	1616486	.	-	0	ID=GCA000012185_01672;Name=non-heme ferritin;locus_tag=GCA000012185_01672;product=non-heme ferritin;Dbxref=GO:0004322,GO:0005737,GO:0005829,GO:0006826,GO:0006879,GO:0008198,GO:0008199;gene=ftnA;Parent=GCA000012185_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,RefSeq:WP_005650594.1,SO:0001217,UniParc:UPI000012AC8D,UniRef:UniRef100_P43707,UniRef:UniRef50_P43707,UniRef:UniRef90_P43707;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	1616989	1618008	.	+	.	ID=GCA000012185_01673_gene;locus_tag=GCA000012185_01673;gene=pstS
contig_1	Pyrodigal	CDS	1616989	1618008	.	+	0	ID=GCA000012185_01673;Name=phosphate ABC transporter substrate-binding protein PstS;locus_tag=GCA000012185_01673;product=phosphate ABC transporter substrate-binding protein PstS;Dbxref=GO:0035435,GO:0042301,GO:0042597,GO:0043190;gene=pstS;Parent=GCA000012185_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0226,COG:P,SO:0001217,UniParc:UPI000053E29B,UniRef:UniRef100_A0A0Y7JQD7,UniRef:UniRef50_P0AG82,UniRef:UniRef90_P45192;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1618100	1619047	.	+	.	ID=GCA000012185_01674_gene;locus_tag=GCA000012185_01674;gene=pstC
contig_1	Pyrodigal	CDS	1618100	1619047	.	+	0	ID=GCA000012185_01674;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000012185_01674;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstC;Parent=GCA000012185_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0573,COG:P,RefSeq:WP_005656744.1,SO:0001217,UniParc:UPI0000132836,UniRef:UniRef100_P45191,UniRef:UniRef50_P45191,UniRef:UniRef90_P45191
contig_1	Pyrodigal	gene	1619049	1619897	.	+	.	ID=GCA000012185_01675_gene;locus_tag=GCA000012185_01675;gene=pstA
contig_1	Pyrodigal	CDS	1619049	1619897	.	+	0	ID=GCA000012185_01675;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000012185_01675;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0035435,GO:0055052;gene=pstA;Parent=GCA000012185_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0581,COG:P,RefSeq:WP_005650601.1,SO:0001217,UniParc:UPI0000132822,UniRef:UniRef100_P45190,UniRef:UniRef50_P07654,UniRef:UniRef90_P45190
contig_1	Pyrodigal	gene	1619907	1620674	.	+	.	ID=GCA000012185_01676_gene;locus_tag=GCA000012185_01676;gene=pstB
contig_1	Pyrodigal	CDS	1619907	1620674	.	+	0	ID=GCA000012185_01676;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000012185_01676;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000012185_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_005650603.1,SO:0001217,UniParc:UPI000039ABF5,UniRef:UniRef100_Q4QK92,UniRef:UniRef50_P0AAH0,UniRef:UniRef90_Q4QK92;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1620771	1621466	.	+	.	ID=GCA000012185_01677_gene;locus_tag=GCA000012185_01677;gene=phoB
contig_1	Pyrodigal	CDS	1620771	1621466	.	+	0	ID=GCA000012185_01677;Name=phosphate regulon transcriptional regulator PhoB;locus_tag=GCA000012185_01677;product=phosphate regulon transcriptional regulator PhoB;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0003677,GO:0005829,GO:0006355,GO:0006817,GO:0032993;gene=phoB;Parent=GCA000012185_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_005650606.1,SO:0001217,UniParc:UPI00001319B3,UniRef:UniRef100_P45189,UniRef:UniRef50_P45189,UniRef:UniRef90_P45189
contig_1	Pyrodigal	gene	1621463	1622740	.	+	.	ID=GCA000012185_01678_gene;locus_tag=GCA000012185_01678;gene=phoR
contig_1	Pyrodigal	CDS	1621463	1622740	.	+	0	ID=GCA000012185_01678;Name=phosphate regulon sensor histidine kinase PhoR;locus_tag=GCA000012185_01678;product=phosphate regulon sensor histidine kinase PhoR;Dbxref=GO:0000155,GO:0000160,GO:0004721,GO:0005524,GO:0005886,GO:0006796,GO:0006817,GO:0016036;gene=phoR;Parent=GCA000012185_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,RefSeq:WP_005653955.1,SO:0001217,UniParc:UPI00003CD8BC,UniRef:UniRef100_A0A0H3PE53,UniRef:UniRef50_P71380,UniRef:UniRef90_P71380;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1623432	1624853	.	-	.	ID=GCA000012185_01679_gene;locus_tag=GCA000012185_01679;gene=sbcB
contig_1	Pyrodigal	CDS	1623432	1624853	.	-	0	ID=GCA000012185_01679;Name=exodeoxyribonuclease I;locus_tag=GCA000012185_01679;product=exodeoxyribonuclease I;Dbxref=GO:0000175,GO:0000287,GO:0003676,GO:0003697,GO:0006281,GO:0006308,GO:0008310,GO:0051575;gene=sbcB;Parent=GCA000012185_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2925,COG:L,KEGG:K01141,RefSeq:WP_011272626.1,SO:0001217,UniParc:UPI000053E29C,UniRef:UniRef100_A0AAJ8WS36,UniRef:UniRef50_P45188,UniRef:UniRef90_P45188;ec_number=3.1.11.1
contig_1	Pyrodigal	gene	1624866	1625741	.	-	.	ID=GCA000012185_01680_gene;locus_tag=GCA000012185_01680
contig_1	Pyrodigal	CDS	1624866	1625741	.	-	0	ID=GCA000012185_01680;Name=putative protein HI_1376;locus_tag=GCA000012185_01680;product=putative protein HI_1376;Dbxref=GO:0005886,GO:0016020;Parent=GCA000012185_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272627.1,SO:0001217,UniParc:UPI000053E29D,UniRef:UniRef100_A0A2R3G3X8,UniRef:UniRef50_P44170,UniRef:UniRef90_P44170
contig_1	Pyrodigal	gene	1625745	1626653	.	-	.	ID=GCA000012185_01681_gene;locus_tag=GCA000012185_01681
contig_1	Pyrodigal	CDS	1625745	1626653	.	-	0	ID=GCA000012185_01681;Name=putative protein HI_1375;locus_tag=GCA000012185_01681;product=putative protein HI_1375;Dbxref=GO:0003676;Parent=GCA000012185_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3586,COG:R,RefSeq:WP_011272628.1,SO:0001217,UniParc:UPI000053E29E,UniRef:UniRef100_A0A2S9S4L9,UniRef:UniRef50_P44169,UniRef:UniRef90_P44169
contig_1	Pyrodigal	gene	1626723	1631255	.	-	.	ID=GCA000012185_01682_gene;locus_tag=GCA000012185_01682;gene=mukB
contig_1	Pyrodigal	CDS	1626723	1631255	.	-	0	ID=GCA000012185_01682;Name=chromosome partition protein MukB;locus_tag=GCA000012185_01682;product=chromosome partition protein MukB;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukB;Parent=GCA000012185_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3096,COG:D,KEGG:K03632,RefSeq:WP_011272629.1,SO:0001217,UniParc:UPI000053E29F,UniRef:UniRef100_Q4QK86,UniRef:UniRef50_P22523,UniRef:UniRef90_P45187
contig_1	Pyrodigal	gene	1631255	1631989	.	-	.	ID=GCA000012185_01683_gene;locus_tag=GCA000012185_01683;gene=mukE
contig_1	Pyrodigal	CDS	1631255	1631989	.	-	0	ID=GCA000012185_01683;Name=chromosome partition protein MukE;locus_tag=GCA000012185_01683;product=chromosome partition protein MukE;Dbxref=GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukE;Parent=GCA000012185_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3095,COG:D,RefSeq:WP_011272630.1,SO:0001217,UniParc:UPI000053E2A0,UniRef:UniRef100_A0A2R3FYG3,UniRef:UniRef50_P22524,UniRef:UniRef90_P45186
contig_1	Pyrodigal	gene	1631993	1633051	.	-	.	ID=GCA000012185_01684_gene;locus_tag=GCA000012185_01684;gene=haeIIR
contig_1	Pyrodigal	CDS	1631993	1633051	.	-	0	ID=GCA000012185_01684;Name=Type II restriction enzyme HaeII;locus_tag=GCA000012185_01684;product=Type II restriction enzyme HaeII;Dbxref=GO:0009036,GO:0009307;gene=haeIIR;Parent=GCA000012185_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272631.1,SO:0001217,UniParc:UPI000053E2A1,UniRef:UniRef100_A0A2R3G4L9,UniRef:UniRef50_Q50973,UniRef:UniRef90_O30869;ec_number=3.1.21.4
contig_1	Pyrodigal	gene	1633054	1634010	.	-	.	ID=GCA000012185_01685_gene;locus_tag=GCA000012185_01685;gene=haeIIM
contig_1	Pyrodigal	CDS	1633054	1634010	.	-	0	ID=GCA000012185_01685;Name=Type II methyltransferase M-HaeII;locus_tag=GCA000012185_01685;product=Type II methyltransferase M-HaeII;Dbxref=GO:0003677,GO:0009307,GO:0032259,GO:0051719,GO:0051720;gene=haeIIM;Parent=GCA000012185_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0270,COG:LJ,KEGG:K00558,RefSeq:WP_011272632.1,SO:0001217,UniParc:UPI00003CDCAF,UniRef:UniRef100_A0A2R3FYJ3,UniRef:UniRef50_Q59603,UniRef:UniRef90_O30868;ec_number=2.1.1.37
contig_1	Pyrodigal	gene	1634023	1635357	.	-	.	ID=GCA000012185_01686_gene;locus_tag=GCA000012185_01686;gene=mukF
contig_1	Pyrodigal	CDS	1634023	1635357	.	-	0	ID=GCA000012185_01686;Name=chromosome partition protein MukF;locus_tag=GCA000012185_01686;product=chromosome partition protein MukF;Dbxref=GO:0005509,GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukF;Parent=GCA000012185_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3006,COG:D,KEGG:K03633,RefSeq:WP_041174768.1,SO:0001217,UniParc:UPI00005915DA,UniRef:UniRef100_Q4QK82,UniRef:UniRef50_P45185,UniRef:UniRef90_P45185
contig_1	Pyrodigal	gene	1635507	1636439	.	+	.	ID=GCA000012185_01687_gene;locus_tag=GCA000012185_01687;gene=ttcA
contig_1	Pyrodigal	CDS	1635507	1636439	.	+	0	ID=GCA000012185_01687;Name=tRNA 2-thiocytidine(32) synthetase TtcA;locus_tag=GCA000012185_01687;product=tRNA 2-thiocytidine(32) synthetase TtcA;Dbxref=GO:0000049,GO:0000287,GO:0005524,GO:0005829,GO:0008033,GO:0016783,GO:0034227,GO:0051539;gene=ttcA;Parent=GCA000012185_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K14058,RefSeq:WP_011272634.1,SO:0001217,UniParc:UPI00003CD918,UniRef:UniRef100_Q4QK81,UniRef:UniRef50_Q5F956,UniRef:UniRef90_A5UBX9;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	1636441	1636770	.	+	.	ID=GCA000012185_01688_gene;locus_tag=GCA000012185_01688;gene=tusE
contig_1	Pyrodigal	CDS	1636441	1636770	.	+	0	ID=GCA000012185_01688;Name=Sulfurtransferase TusE-like protein;locus_tag=GCA000012185_01688;product=Sulfurtransferase TusE-like protein;Dbxref=GO:0002143,GO:0005737,GO:0016740,GO:0097163;gene=tusE;Parent=GCA000012185_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2920,COG:J,RefSeq:WP_011272635.1,SO:0001217,UniParc:UPI00003CD917,UniRef:UniRef100_Q4QK80,UniRef:UniRef50_P45184,UniRef:UniRef90_P45184;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	1636878	1637087	.	+	.	ID=GCA000012185_01689_gene;locus_tag=GCA000012185_01689;gene=mopI
contig_1	Pyrodigal	CDS	1636878	1637087	.	+	0	ID=GCA000012185_01689;Name=putative molybdenum-pterin-binding protein;locus_tag=GCA000012185_01689;product=putative molybdenum-pterin-binding protein;Dbxref=GO:0015689;gene=mopI;Parent=GCA000012185_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3585,COG:H,RefSeq:WP_005631673.1,SO:0001217,UniParc:UPI000012F3B0,UniRef:UniRef100_P45183,UniRef:UniRef50_P08854,UniRef:UniRef90_P45183
contig_1	Pyrodigal	gene	1637396	1638721	.	+	.	ID=GCA000012185_01690_gene;locus_tag=GCA000012185_01690
contig_1	Pyrodigal	CDS	1637396	1638721	.	+	0	ID=GCA000012185_01690;Name=Plug domain-containing protein;locus_tag=GCA000012185_01690;product=Plug domain-containing protein;Parent=GCA000012185_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q0I3H2,UniRef:UniRef90_UPI000D4F3E66
contig_1	Pyrodigal	gene	1639003	1639683	.	+	.	ID=GCA000012185_01691_gene;locus_tag=GCA000012185_01691;gene=fepA
contig_1	Pyrodigal	CDS	1639003	1639683	.	+	0	ID=GCA000012185_01691;Name=TonB-dependent receptor plug domain-containing protein;locus_tag=GCA000012185_01691;product=TonB-dependent receptor plug domain-containing protein;gene=fepA;Parent=GCA000012185_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4771,COG:P,RefSeq:WP_228369072.1,SO:0001217,UniParc:UPI0002D717B1,UniRef:UniRef100_UPI001CC46D9F,UniRef:UniRef50_P45182,UniRef:UniRef90_A4N5H1
contig_1	Pyrodigal	gene	1639787	1642567	.	+	.	ID=GCA000012185_01692_gene;locus_tag=GCA000012185_01692;gene=pqqL
contig_1	Pyrodigal	CDS	1639787	1642567	.	+	0	ID=GCA000012185_01692;Name=putative zinc protease PqqL;locus_tag=GCA000012185_01692;product=putative zinc protease PqqL;Dbxref=GO:0004222,GO:0006508,GO:0046872;gene=pqqL;Parent=GCA000012185_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,KEGG:K07263,RefSeq:WP_011272636.1,SO:0001217,UniParc:UPI000053E2A3,UniRef:UniRef100_Q4QK78,UniRef:UniRef50_P45181,UniRef:UniRef90_P45181;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1642690	1644621	.	-	.	ID=GCA000012185_01693_gene;locus_tag=GCA000012185_01693;gene=thrS
contig_1	Pyrodigal	CDS	1642690	1644621	.	-	0	ID=GCA000012185_01693;Name=threonine--tRNA ligase;locus_tag=GCA000012185_01693;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0005829,GO:0006435,GO:0046872;gene=thrS;Parent=GCA000012185_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_011272637.1,SO:0001217,UniParc:UPI000053E2A4,UniRef:UniRef100_Q4QK77,UniRef:UniRef50_P43014,UniRef:UniRef90_P43014;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1644905	1645489	.	+	.	ID=GCA000012185_01694_gene;locus_tag=GCA000012185_01694;gene=azoR
contig_1	Pyrodigal	CDS	1644905	1645489	.	+	0	ID=GCA000012185_01694;Name=FMN-dependent NADH:quinone oxidoreductase;locus_tag=GCA000012185_01694;product=FMN-dependent NADH:quinone oxidoreductase;Dbxref=GO:0009055,GO:0010181,GO:0016652,GO:0016655;gene=azoR;Parent=GCA000012185_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_011272638.1,SO:0001217,UniParc:UPI00003CDB7E,UniRef:UniRef100_Q4QK76,UniRef:UniRef50_P43013,UniRef:UniRef90_P43013;ec_number=1.6.5.-
contig_1	Pyrodigal	gene	1645566	1648172	.	-	.	ID=GCA000012185_01695_gene;locus_tag=GCA000012185_01695;gene=topA
contig_1	Pyrodigal	CDS	1645566	1648172	.	-	0	ID=GCA000012185_01695;Name=type I DNA topoisomerase;locus_tag=GCA000012185_01695;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872;gene=topA;Parent=GCA000012185_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,KEGG:K03168,RefSeq:WP_011272639.1,SO:0001217,UniParc:UPI000053E2A5,UniRef:UniRef100_Q4QK75,UniRef:UniRef50_P43012,UniRef:UniRef90_P43012;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1648268	1649185	.	+	.	ID=GCA000012185_01696_gene;locus_tag=GCA000012185_01696;gene=lysR
contig_1	Pyrodigal	CDS	1648268	1649185	.	+	0	ID=GCA000012185_01696;Name=putative HTH-type transcriptional regulator HI_1364;locus_tag=GCA000012185_01696;product=putative HTH-type transcriptional regulator HI_1364;Dbxref=GO:0003700,GO:0006351,GO:0043565;gene=lysR;Parent=GCA000012185_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_011272640.1,SO:0001217,UniParc:UPI00003CD9D4,UniRef:UniRef100_Q4QK74,UniRef:UniRef50_P43011,UniRef:UniRef90_P43011
contig_1	Pyrodigal	gene	1649249	1650673	.	-	.	ID=GCA000012185_01697_gene;locus_tag=GCA000012185_01697;gene=pntB
contig_1	Pyrodigal	CDS	1649249	1650673	.	-	0	ID=GCA000012185_01697;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;locus_tag=GCA000012185_01697;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;Dbxref=GO:0008750,GO:0016020,GO:0050661;gene=pntB;Parent=GCA000012185_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00325,RefSeq:WP_005650651.1,SO:0001217,UniParc:UPI00003CD9D3,UniRef:UniRef100_A0A0D0IJ45,UniRef:UniRef50_P43010,UniRef:UniRef90_A0A0D0IJ45;ec_number=7.1.1.1
contig_1	Pyrodigal	gene	1650684	1652222	.	-	.	ID=GCA000012185_01698_gene;locus_tag=GCA000012185_01698;gene=pntA
contig_1	Pyrodigal	CDS	1650684	1652222	.	-	0	ID=GCA000012185_01698;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;locus_tag=GCA000012185_01698;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;Dbxref=GO:0005886,GO:0006740,GO:0008750,GO:0016491,GO:0046983,GO:0050661,GO:1902600;gene=pntA;Parent=GCA000012185_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3288,RefSeq:WP_005631652.1,SO:0001217,UniParc:UPI000039ABE3,UniRef:UniRef100_A0A0M3G2S9,UniRef:UniRef50_P43842,UniRef:UniRef90_P43842;ec_number=7.1.1.1
contig_1	Pyrodigal	gene	1652483	1654948	.	-	.	ID=GCA000012185_01699_gene;locus_tag=GCA000012185_01699;gene=glgP
contig_1	Pyrodigal	CDS	1652483	1654948	.	-	0	ID=GCA000012185_01699;Name=Glycogen phosphorylase;locus_tag=GCA000012185_01699;product=Glycogen phosphorylase;Dbxref=GO:0005737,GO:0005980,GO:0008184,GO:0030170,GO:0031220;gene=glgP;Parent=GCA000012185_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0058,COG:G,RefSeq:WP_011272641.1,SO:0001217,UniParc:UPI000053E2A6,UniRef:UniRef100_Q4QK71,UniRef:UniRef50_P45180,UniRef:UniRef90_P45180;ec_number=2.4.1.1
contig_1	Pyrodigal	gene	1655195	1656625	.	-	.	ID=GCA000012185_01700_gene;locus_tag=GCA000012185_01700;gene=glgA
contig_1	Pyrodigal	CDS	1655195	1656625	.	-	0	ID=GCA000012185_01700;Name=glycogen synthase GlgA;locus_tag=GCA000012185_01700;product=glycogen synthase GlgA;Dbxref=GO:0004373,GO:0005829,GO:0005978,GO:0009011;gene=glgA;Parent=GCA000012185_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0297,COG:G,RefSeq:WP_005656779.1,SO:0001217,UniParc:UPI000053E2A7,UniRef:UniRef100_Q4QK70,UniRef:UniRef50_Q8ZA78,UniRef:UniRef90_P45179;ec_number=2.4.1.21
contig_1	Pyrodigal	gene	1656733	1658034	.	-	.	ID=GCA000012185_01701_gene;locus_tag=GCA000012185_01701;gene=glgC
contig_1	Pyrodigal	CDS	1656733	1658034	.	-	0	ID=GCA000012185_01701;Name=glucose-1-phosphate adenylyltransferase;locus_tag=GCA000012185_01701;product=glucose-1-phosphate adenylyltransferase;Dbxref=GO:0005524,GO:0005978,GO:0008878;gene=glgC;Parent=GCA000012185_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0448,COG:G,KEGG:K00975,RefSeq:WP_038441126.1,SO:0001217,UniParc:UPI00031218DF,UniRef:UniRef100_Q4QK69,UniRef:UniRef50_P43796,UniRef:UniRef90_P43796;ec_number=2.7.7.27
contig_1	Pyrodigal	gene	1658057	1660033	.	-	.	ID=GCA000012185_01702_gene;locus_tag=GCA000012185_01702;gene=glgX
contig_1	Pyrodigal	CDS	1658057	1660033	.	-	0	ID=GCA000012185_01702;Name=glycogen debranching protein GlgX;locus_tag=GCA000012185_01702;product=glycogen debranching protein GlgX;Dbxref=GO:0004133,GO:0004553,GO:0005978,GO:0005980;gene=glgX;Parent=GCA000012185_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1523,COG:G,KEGG:K01214,RefSeq:WP_011272643.1,SO:0001217,UniParc:UPI000053E2A9,UniRef:UniRef100_Q4QK68,UniRef:UniRef50_P45178,UniRef:UniRef90_P45178;ec_number=3.2.1.196
contig_1	Pyrodigal	gene	1660132	1662324	.	-	.	ID=GCA000012185_01703_gene;locus_tag=GCA000012185_01703;gene=glgB
contig_1	Pyrodigal	CDS	1660132	1662324	.	-	0	ID=GCA000012185_01703;Name=1%2C4-alpha-glucan branching protein GlgB;locus_tag=GCA000012185_01703;product=1%2C4-alpha-glucan branching protein GlgB;Dbxref=GO:0003844,GO:0004553,GO:0005737,GO:0005829,GO:0005975,GO:0005978,GO:0043169;gene=glgB;Parent=GCA000012185_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0296,COG:G,KEGG:K00700,RefSeq:WP_011272644.1,SO:0001217,UniParc:UPI000053E2AA,UniRef:UniRef100_Q4QK67,UniRef:UniRef50_P45177,UniRef:UniRef90_P45177;ec_number=2.4.1.18
contig_1	Pyrodigal	gene	1662334	1664424	.	-	.	ID=GCA000012185_01704_gene;locus_tag=GCA000012185_01704;gene=malQ
contig_1	Pyrodigal	CDS	1662334	1664424	.	-	0	ID=GCA000012185_01704;Name=4-alpha-glucanotransferase;locus_tag=GCA000012185_01704;product=4-alpha-glucanotransferase;Dbxref=GO:0004134,GO:0005737,GO:0005975,GO:0005980;gene=malQ;Parent=GCA000012185_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1640,COG:G,RefSeq:WP_038441122.1,SO:0001217,UniParc:UPI0002EF4D91,UniRef:UniRef100_A0A346JVY5,UniRef:UniRef50_P45176,UniRef:UniRef90_P45176;ec_number=2.4.1.25
contig_1	Pyrodigal	gene	1664495	1664947	.	-	.	ID=GCA000012185_01705_gene;locus_tag=GCA000012185_01705;gene=ycgN
contig_1	Pyrodigal	CDS	1664495	1664947	.	-	0	ID=GCA000012185_01705;Name=YcgN family cysteine cluster protein;locus_tag=GCA000012185_01705;product=YcgN family cysteine cluster protein;gene=ycgN;Parent=GCA000012185_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2983,COG:R,KEGG:K09160,RefSeq:WP_005656793.1,SO:0001217,UniParc:UPI00014F7511,UniRef:UniRef100_Q4QK65,UniRef:UniRef50_Q9CN96,UniRef:UniRef90_P44168
contig_1	Pyrodigal	gene	1665025	1666698	.	-	.	ID=GCA000012185_01706_gene;locus_tag=GCA000012185_01706;gene=glnS
contig_1	Pyrodigal	CDS	1665025	1666698	.	-	0	ID=GCA000012185_01706;Name=glutamine--tRNA ligase;locus_tag=GCA000012185_01706;product=glutamine--tRNA ligase;Dbxref=GO:0000166,GO:0004819,GO:0005524,GO:0005737,GO:0005829,GO:0006424,GO:0006425;gene=glnS;Parent=GCA000012185_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,KEGG:K01886,SO:0001217,UniParc:UPI000053E2AC,UniRef:UniRef100_Q4QK64,UniRef:UniRef50_P00962,UniRef:UniRef90_P43831;ec_number=6.1.1.18
contig_1	Pyrodigal	gene	1667118	1668593	.	-	.	ID=GCA000012185_01707_gene;locus_tag=GCA000012185_01707;gene=rng
contig_1	Pyrodigal	CDS	1667118	1668593	.	-	0	ID=GCA000012185_01707;Name=ribonuclease G;locus_tag=GCA000012185_01707;product=ribonuclease G;Dbxref=GO:0000049,GO:0003723,GO:0004519,GO:0004540,GO:0005737,GO:0006364,GO:0006396,GO:0008033,GO:0019843,GO:0046872,GO:0051301;gene=rng;Parent=GCA000012185_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,RefSeq:WP_005694007.1,SO:0001217,UniParc:UPI000053E2AD,UniRef:UniRef100_A0A2S9S4L5,UniRef:UniRef50_P45175,UniRef:UniRef90_P45175;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	1668709	1670223	.	+	.	ID=GCA000012185_01708_gene;locus_tag=GCA000012185_01708;gene=putP
contig_1	Pyrodigal	CDS	1668709	1670223	.	+	0	ID=GCA000012185_01708;Name=sodium/proline symporter PutP;locus_tag=GCA000012185_01708;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0005886,GO:0006814,GO:0015193,GO:0015824,GO:0016020,GO:0031402,GO:0055085;gene=putP;Parent=GCA000012185_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_011272648.1,SO:0001217,UniParc:UPI000053E2AE,UniRef:UniRef100_A0A2S9S4R2,UniRef:UniRef50_P45174,UniRef:UniRef90_P45174
contig_1	Pyrodigal	gene	1670220	1671185	.	+	.	ID=GCA000012185_01709_gene;locus_tag=GCA000012185_01709;gene=cmoB
contig_1	Pyrodigal	CDS	1670220	1671185	.	+	0	ID=GCA000012185_01709;Name=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;locus_tag=GCA000012185_01709;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;Dbxref=GO:0002098,GO:0008168,GO:0016765;gene=cmoB;Parent=GCA000012185_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2227,COG:H,RefSeq:WP_011272649.1,SO:0001217,UniParc:UPI000053E2AF,UniRef:UniRef100_Q4QK61,UniRef:UniRef50_B8F571,UniRef:UniRef90_P44167;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	1671228	1672106	.	-	.	ID=GCA000012185_01710_gene;locus_tag=GCA000012185_01710;gene=cdd
contig_1	Pyrodigal	CDS	1671228	1672106	.	-	0	ID=GCA000012185_01710;Name=cytidine deaminase;locus_tag=GCA000012185_01710;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005829,GO:0008270,GO:0009972,GO:0042802;gene=cdd;Parent=GCA000012185_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,RefSeq:WP_005650690.1,SO:0001217,UniParc:UPI000039ABD8,UniRef:UniRef100_Q4QK60,UniRef:UniRef50_P44325,UniRef:UniRef90_P44325;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	1672380	1672862	.	+	.	ID=GCA000012185_01711_gene;locus_tag=GCA000012185_01711;gene=dps
contig_1	Pyrodigal	CDS	1672380	1672862	.	+	0	ID=GCA000012185_01711;Name=putative protein HI_1349;locus_tag=GCA000012185_01711;product=putative protein HI_1349;Dbxref=GO:0008199,GO:0016722;gene=dps;Parent=GCA000012185_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_005650692.1,SO:0001217,UniParc:UPI000013A84B,UniRef:UniRef100_P45173,UniRef:UniRef50_P45173,UniRef:UniRef90_P45173
contig_1	Pyrodigal	gene	1673434	1674672	.	-	.	ID=GCA000012185_01712_gene;locus_tag=GCA000012185_01712;gene=pepT
contig_1	Pyrodigal	CDS	1673434	1674672	.	-	0	ID=GCA000012185_01712;Name=peptidase T;locus_tag=GCA000012185_01712;product=peptidase T;Dbxref=GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0043171,GO:0045148;gene=pepT;Parent=GCA000012185_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005691947.1,SO:0001217,UniParc:UPI000053E2B0,UniRef:UniRef100_Q4QK58,UniRef:UniRef50_P45172,UniRef:UniRef90_P45172;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	1674942	1676087	.	+	.	ID=GCA000012185_01713_gene;locus_tag=GCA000012185_01713;gene=potA
contig_1	Pyrodigal	CDS	1674942	1676087	.	+	0	ID=GCA000012185_01713;Name=spermidine/putrescine ABC transporter ATP-binding protein PotA;locus_tag=GCA000012185_01713;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015594,GO:0015846,GO:0016020,GO:0016887,GO:0022857,GO:0043190;gene=potA;Parent=GCA000012185_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,SO:0001217,UniParc:UPI000053E2B1,UniRef:UniRef100_A0AAJ8WRN2,UniRef:UniRef50_P69874,UniRef:UniRef90_P45171;ec_number=7.6.2.11
contig_1	Pyrodigal	gene	1676071	1676931	.	+	.	ID=GCA000012185_01714_gene;locus_tag=GCA000012185_01714;gene=potB
contig_1	Pyrodigal	CDS	1676071	1676931	.	+	0	ID=GCA000012185_01714;Name=spermidine/putrescine ABC transporter permease PotB;locus_tag=GCA000012185_01714;product=spermidine/putrescine ABC transporter permease PotB;Dbxref=GO:0005886,GO:0016020,GO:0055085;gene=potB;Parent=GCA000012185_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_005650698.1,SO:0001217,UniParc:UPI000053E2B2,UniRef:UniRef100_A0A0H3PMR0,UniRef:UniRef50_P0AFK4,UniRef:UniRef90_P45170;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1676931	1677701	.	+	.	ID=GCA000012185_01715_gene;locus_tag=GCA000012185_01715;gene=potC
contig_1	Pyrodigal	CDS	1676931	1677701	.	+	0	ID=GCA000012185_01715;Name=spermidine/putrescine ABC transporter permease PotC;locus_tag=GCA000012185_01715;product=spermidine/putrescine ABC transporter permease PotC;Dbxref=GO:0005886,GO:0055085;gene=potC;Parent=GCA000012185_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_005650699.1,SO:0001217,UniParc:UPI000039A727,UniRef:UniRef100_A0A0H3PEW0,UniRef:UniRef50_P0AFK6,UniRef:UniRef90_P45169;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1677832	1678914	.	+	.	ID=GCA000012185_01716_gene;locus_tag=GCA000012185_01716;gene=potD-B
contig_1	Pyrodigal	CDS	1677832	1678914	.	+	0	ID=GCA000012185_01716;Name=Spermidine/putrescine-binding periplasmic protein 1;locus_tag=GCA000012185_01716;product=Spermidine/putrescine-binding periplasmic protein 1;Dbxref=GO:0015846,GO:0019808,GO:0042597;gene=potD-B;Parent=GCA000012185_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_005688477.1,SO:0001217,UniParc:UPI0001A3F499,UniRef:UniRef100_Q4QK54,UniRef:UniRef50_P45168,UniRef:UniRef90_P45168
contig_1	Pyrodigal	gene	1678995	1680938	.	-	.	ID=GCA000012185_01717_gene;locus_tag=GCA000012185_01717;gene=uup
contig_1	Pyrodigal	CDS	1678995	1680938	.	-	0	ID=GCA000012185_01717;Name=ABC transporter ATP-binding protein;locus_tag=GCA000012185_01717;product=ABC transporter ATP-binding protein;Dbxref=GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0016887,GO:0043022,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=uup;Parent=GCA000012185_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_011272652.1,SO:0001217,UniParc:UPI000053E2B4,UniRef:UniRef100_Q4QK53,UniRef:UniRef50_P43672,UniRef:UniRef90_Q57242;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1681032	1682417	.	-	.	ID=GCA000012185_01718_gene;locus_tag=GCA000012185_01718;gene=dgt
contig_1	Pyrodigal	CDS	1681032	1682417	.	-	0	ID=GCA000012185_01718;Name=anti-phage deoxyguanosine triphosphatase;locus_tag=GCA000012185_01718;product=anti-phage deoxyguanosine triphosphatase;Dbxref=GO:0006203,GO:0008832;gene=dgt;Parent=GCA000012185_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0232,COG:F,KEGG:K01129,RefSeq:WP_005659555.1,SO:0001217,UniParc:UPI00003CD978,UniRef:UniRef100_Q4QK52,UniRef:UniRef50_Q8EEA2,UniRef:UniRef90_A5UF19;ec_number=3.1.5.1
contig_1	Pyrodigal	gene	1682510	1683205	.	-	.	ID=GCA000012185_01719_gene;locus_tag=GCA000012185_01719;gene=lrgB
contig_1	Pyrodigal	CDS	1682510	1683205	.	-	0	ID=GCA000012185_01719;Name=CidB/LrgB family autolysis modulator;locus_tag=GCA000012185_01719;product=CidB/LrgB family autolysis modulator;Dbxref=GO:0005886;gene=lrgB;Parent=GCA000012185_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_005659557.1,SO:0001217,UniParc:UPI00003CD979,UniRef:UniRef100_Q4QK51,UniRef:UniRef50_P45146,UniRef:UniRef90_P45146
contig_1	Pyrodigal	gene	1683224	1683646	.	-	.	ID=GCA000012185_01720_gene;locus_tag=GCA000012185_01720;gene=yohJ
contig_1	Pyrodigal	CDS	1683224	1683646	.	-	0	ID=GCA000012185_01720;Name=UPF0299 membrane protein NTHI1827;locus_tag=GCA000012185_01720;product=UPF0299 membrane protein NTHI1827;Dbxref=GO:0005886;gene=yohJ;Parent=GCA000012185_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1380,COG:R,RefSeq:WP_005650310.1,SO:0001217,UniParc:UPI000039AC6E,UniRef:UniRef100_A5UF21,UniRef:UniRef50_P45145,UniRef:UniRef90_P45145
contig_1	Pyrodigal	gene	1683761	1684243	.	+	.	ID=GCA000012185_01721_gene;locus_tag=GCA000012185_01721;gene=yncB
contig_1	Pyrodigal	CDS	1683761	1684243	.	+	0	ID=GCA000012185_01721;Name=Thermonuclease;locus_tag=GCA000012185_01721;product=Thermonuclease;gene=yncB;Parent=GCA000012185_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_011272653.1,SO:0001217,UniParc:UPI000053E2B5,UniRef:UniRef100_Q4QK49,UniRef:UniRef50_Q57519,UniRef:UniRef90_A0A0D0HSY4
contig_1	Pyrodigal	gene	1684245	1685444	.	+	.	ID=GCA000012185_01722_gene;locus_tag=GCA000012185_01722;gene=csd
contig_1	Pyrodigal	CDS	1684245	1685444	.	+	0	ID=GCA000012185_01722;Name=putative cysteine desulfurase;locus_tag=GCA000012185_01722;product=putative cysteine desulfurase;Dbxref=GO:0006534,GO:0030170,GO:0031071;gene=csd;Parent=GCA000012185_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0520,COG:E,KEGG:K01766,RefSeq:WP_011272654.1,SO:0001217,UniParc:UPI00003CDBD6,UniRef:UniRef100_Q4QK48,UniRef:UniRef50_Q57476,UniRef:UniRef90_Q57476;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1685441	1685821	.	+	.	ID=GCA000012185_01723_gene;locus_tag=GCA000012185_01723;gene=sufE
contig_1	Pyrodigal	CDS	1685441	1685821	.	+	0	ID=GCA000012185_01723;Name=putative SufE-like protein HI_1293;locus_tag=GCA000012185_01723;product=putative SufE-like protein HI_1293;gene=sufE;Parent=GCA000012185_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2166,COG:OJ,RefSeq:WP_005631781.1,SO:0001217,UniParc:UPI00003CDBD5,UniRef:UniRef100_Q4QK47,UniRef:UniRef50_P44156,UniRef:UniRef90_P44156
contig_1	Pyrodigal	gene	1685812	1686609	.	+	.	ID=GCA000012185_01724_gene;locus_tag=GCA000012185_01724
contig_1	Pyrodigal	CDS	1685812	1686609	.	+	0	ID=GCA000012185_01724;Name=putative protein HI_1292;locus_tag=GCA000012185_01724;product=putative protein HI_1292;Parent=GCA000012185_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5595,COG:R,RefSeq:WP_011272655.1,SO:0001217,UniParc:UPI000053E2B6,UniRef:UniRef100_Q4QK46,UniRef:UniRef50_P44154,UniRef:UniRef90_P44154
contig_1	Pyrodigal	gene	1686653	1687492	.	+	.	ID=GCA000012185_01725_gene;locus_tag=GCA000012185_01725;gene=queF
contig_1	Pyrodigal	CDS	1686653	1687492	.	+	0	ID=GCA000012185_01725;Name=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;locus_tag=GCA000012185_01725;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0043867;gene=queF;Parent=GCA000012185_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2904,COG:J,KEGG:K06879,RefSeq:WP_011272656.1,SO:0001217,UniParc:UPI00003CDA07,UniRef:UniRef100_Q4QK45,UniRef:UniRef50_Q46920,UniRef:UniRef90_P44153;ec_number=1.7.1.13
contig_1	Pyrodigal	gene	1687525	1688649	.	-	.	ID=GCA000012185_01726_gene;locus_tag=GCA000012185_01726;gene=tyrA
contig_1	Pyrodigal	CDS	1687525	1688649	.	-	0	ID=GCA000012185_01726;Name=bifunctional chorismate mutase/prephenate dehydrogenase;locus_tag=GCA000012185_01726;product=bifunctional chorismate mutase/prephenate dehydrogenase;Dbxref=GO:0004106,GO:0004665,GO:0005737,GO:0006571,GO:0008977,GO:0046417,GO:0070403;gene=tyrA;Parent=GCA000012185_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1605,COG:E,KEGG:K14187,RefSeq:WP_011272657.1,SO:0001217,UniParc:UPI00003CDA06,UniRef:UniRef100_A0A346JVW5,UniRef:UniRef50_P07023,UniRef:UniRef90_P43902;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1688739	1689659	.	-	.	ID=GCA000012185_01727_gene;locus_tag=GCA000012185_01727;gene=truB
contig_1	Pyrodigal	CDS	1688739	1689659	.	-	0	ID=GCA000012185_01727;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000012185_01727;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000012185_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,RefSeq:WP_011272658.1,SO:0001217,UniParc:UPI00003CDA05,UniRef:UniRef100_Q4QK43,UniRef:UniRef50_P60340,UniRef:UniRef90_P45142;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	1689659	1690045	.	-	.	ID=GCA000012185_01728_gene;locus_tag=GCA000012185_01728;gene=rbfA
contig_1	Pyrodigal	CDS	1689659	1690045	.	-	0	ID=GCA000012185_01728;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000012185_01728;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0043024;gene=rbfA;Parent=GCA000012185_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0858,COG:J,KEGG:K02834,RefSeq:WP_005628626.1,SO:0001217,UniParc:UPI000039AC76,UniRef:UniRef100_Q4QK42,UniRef:UniRef50_P45141,UniRef:UniRef90_P45141
contig_1	Pyrodigal	gene	1690210	1691880	.	+	.	ID=GCA000012185_01729_gene;locus_tag=GCA000012185_01729;gene=hsdM
contig_1	Pyrodigal	CDS	1690210	1691880	.	+	0	ID=GCA000012185_01729;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000012185_01729;product=site-specific DNA-methyltransferase (adenine-specific);gene=hsdM;Parent=GCA000012185_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,SO:0001217,UniParc:UPI000053E2B7,UniRef:UniRef100_A0A2S9S4W2,UniRef:UniRef50_A0A2U1RDL5,UniRef:UniRef90_A0A377J0Z3
contig_1	Pyrodigal	gene	1691873	1693138	.	+	.	ID=GCA000012185_01730_gene;locus_tag=GCA000012185_01730
contig_1	Pyrodigal	CDS	1691873	1693138	.	+	0	ID=GCA000012185_01730;Name=Restriction endonuclease subunit S;locus_tag=GCA000012185_01730;product=Restriction endonuclease subunit S;Parent=GCA000012185_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_011272660.1,SO:0001217,UniParc:UPI000053E2B8,UniRef:UniRef100_A0A2S9S4T8,UniRef:UniRef50_A0A2S9S4T8,UniRef:UniRef90_A0A2S9S4T8;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	1693119	1694177	.	+	.	ID=GCA000012185_01731_gene;locus_tag=GCA000012185_01731
contig_1	Pyrodigal	CDS	1693119	1694177	.	+	0	ID=GCA000012185_01731;Name=SIR2-like domain-containing protein;locus_tag=GCA000012185_01731;product=SIR2-like domain-containing protein;Parent=GCA000012185_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000E60167,UniRef:UniRef100_A0AAJ8WCN3,UniRef:UniRef50_V9HCF8,UniRef:UniRef90_A0A377IZX8
contig_1	Pyrodigal	gene	1694179	1697346	.	+	.	ID=GCA000012185_01732_gene;locus_tag=GCA000012185_01732;gene=hsdR
contig_1	Pyrodigal	CDS	1694179	1697346	.	+	0	ID=GCA000012185_01732;Name=Type I restriction enzyme HindI endonuclease subunit;locus_tag=GCA000012185_01732;product=Type I restriction enzyme HindI endonuclease subunit;Dbxref=GO:0003677,GO:0005524,GO:0009035,GO:0009307;gene=hsdR;Parent=GCA000012185_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0610,COG:V,KEGG:K01153,RefSeq:WP_011272662.1,SO:0001217,UniParc:UPI000053E2B9,UniRef:UniRef100_A0A2S9S4T1,UniRef:UniRef50_O05052,UniRef:UniRef90_O05052;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	1697425	1699959	.	-	.	ID=GCA000012185_01733_gene;locus_tag=GCA000012185_01733;gene=infB
contig_1	Pyrodigal	CDS	1697425	1699959	.	-	0	ID=GCA000012185_01733;Name=translation initiation factor IF-2;locus_tag=GCA000012185_01733;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413,GO:0097216;gene=infB;Parent=GCA000012185_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3064,COG:M,KEGG:K02519,RefSeq:WP_011272663.1,SO:0001217,UniParc:UPI00003CD808,UniRef:UniRef100_Q4QK37,UniRef:UniRef50_P44323,UniRef:UniRef90_P44323
contig_1	Pyrodigal	gene	1699971	1701458	.	-	.	ID=GCA000012185_01734_gene;locus_tag=GCA000012185_01734;gene=nusA
contig_1	Pyrodigal	CDS	1699971	1701458	.	-	0	ID=GCA000012185_01734;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA000012185_01734;product=Transcription termination/antitermination protein NusA;Dbxref=GO:0000166,GO:0003700,GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusA;Parent=GCA000012185_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0195,COG:K,RefSeq:WP_005631625.1,SO:0001217,UniParc:UPI000039AC7C,UniRef:UniRef100_A0A2S9S4U3,UniRef:UniRef50_P0AFF6,UniRef:UniRef90_P43915
contig_1	Pyrodigal	gene	1701475	1701930	.	-	.	ID=GCA000012185_01735_gene;locus_tag=GCA000012185_01735;gene=rimP
contig_1	Pyrodigal	CDS	1701475	1701930	.	-	0	ID=GCA000012185_01735;Name=ribosome maturation factor RimP;locus_tag=GCA000012185_01735;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000012185_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_005650281.1,SO:0001217,UniParc:UPI00003CD807,UniRef:UniRef100_Q4QK35,UniRef:UniRef50_P45138,UniRef:UniRef90_P45138
contig_1	tRNAscan-SE	gene	1702152	1702228	.	-	.	ID=GCA000012185_01736_gene;locus_tag=GCA000012185_01736;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1702152	1702228	.	-	.	ID=GCA000012185_01736;Name=tRNA-fMet(cat);locus_tag=GCA000012185_01736;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000012185_01736_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Aragorn	gene	1702657	1703022	.	+	.	ID=GCA000012185_01737_gene;locus_tag=GCA000012185_01737;gene=ssrA
contig_1	Aragorn	tmRNA	1702657	1703022	.	+	.	ID=GCA000012185_01737;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000012185_01737;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=1702748..1702783;Parent=GCA000012185_01737_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	1703206	1703298	.	+	.	ID=GCA000012185_01738_gene;locus_tag=GCA000012185_01738
contig_1	Pyrodigal	CDS	1703206	1703298	.	+	0	ID=GCA000012185_01738;Name=hypothetical protein;locus_tag=GCA000012185_01738;product=hypothetical protein;Parent=GCA000012185_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005BEC1ED,UniRef:UniRef100_A0A2S9R6B1,UniRef:UniRef50_A0A2S9R6B1,UniRef:UniRef90_A0A2S9R6B1
contig_1	Pyrodigal	gene	1703591	1704355	.	-	.	ID=GCA000012185_01739_gene;locus_tag=GCA000012185_01739
contig_1	Pyrodigal	CDS	1703591	1704355	.	-	0	ID=GCA000012185_01739;Name=hypothetical protein;locus_tag=GCA000012185_01739;product=hypothetical protein;Parent=GCA000012185_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272664.1,SO:0001217,UniParc:UPI000017D290,UniRef:UniRef100_Q6J5A6,UniRef:UniRef50_A0A8S5M051,UniRef:UniRef90_Q6J5A6
contig_1	Pyrodigal	gene	1704359	1704886	.	-	.	ID=GCA000012185_01740_gene;locus_tag=GCA000012185_01740
contig_1	Pyrodigal	CDS	1704359	1704886	.	-	0	ID=GCA000012185_01740;Name=DUF5610 domain-containing protein;locus_tag=GCA000012185_01740;product=DUF5610 domain-containing protein;Parent=GCA000012185_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272665.1,SO:0001217,UniParc:UPI000017D28F,UniRef:UniRef100_A0A2S9S516,UniRef:UniRef50_A0A1V4B3G3,UniRef:UniRef90_A0A502LMW8
contig_1	Pyrodigal	gene	1704896	1706068	.	-	.	ID=GCA000012185_01741_gene;locus_tag=GCA000012185_01741
contig_1	Pyrodigal	CDS	1704896	1706068	.	-	0	ID=GCA000012185_01741;Name=hypothetical protein;locus_tag=GCA000012185_01741;product=hypothetical protein;Parent=GCA000012185_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_224056832.1,SO:0001217,UniParc:UPI00003CDA6A,UniRef:UniRef100_Q4QK32,UniRef:UniRef50_Q4QK32,UniRef:UniRef90_Q4QK32
contig_1	Pyrodigal	gene	1706052	1706420	.	-	.	ID=GCA000012185_01742_gene;locus_tag=GCA000012185_01742
contig_1	Pyrodigal	CDS	1706052	1706420	.	-	0	ID=GCA000012185_01742;Name=hypothetical protein;locus_tag=GCA000012185_01742;product=hypothetical protein;Parent=GCA000012185_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005642880.1,SO:0001217,UniParc:UPI000017D28D,UniRef:UniRef100_A0A2S9S053,UniRef:UniRef50_A4P1D1,UniRef:UniRef90_A0A2S9S053
contig_1	Pyrodigal	gene	1706434	1707255	.	-	.	ID=GCA000012185_01743_gene;locus_tag=GCA000012185_01743
contig_1	Pyrodigal	CDS	1706434	1707255	.	-	0	ID=GCA000012185_01743;Name=Minor capsid protein;locus_tag=GCA000012185_01743;product=Minor capsid protein;Parent=GCA000012185_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272667.1,SO:0001217,UniParc:UPI000053E2BB,UniRef:UniRef100_A0A2S9S4W6,UniRef:UniRef50_A0A9Q7E5N2,UniRef:UniRef90_A0A2S9S4W6
contig_1	Pyrodigal	gene	1707312	1707815	.	-	.	ID=GCA000012185_01744_gene;locus_tag=GCA000012185_01744
contig_1	Pyrodigal	CDS	1707312	1707815	.	-	0	ID=GCA000012185_01744;Name=Enoyl-CoA hydratase;locus_tag=GCA000012185_01744;product=Enoyl-CoA hydratase;Parent=GCA000012185_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272668.1,SO:0001217,UniParc:UPI000017D28B,UniRef:UniRef100_A0AAJ8WCF1,UniRef:UniRef50_I3DC15,UniRef:UniRef90_A0AAJ8WCF1
contig_1	Pyrodigal	gene	1707812	1708414	.	-	.	ID=GCA000012185_01745_gene;locus_tag=GCA000012185_01745
contig_1	Pyrodigal	CDS	1707812	1708414	.	-	0	ID=GCA000012185_01745;Name=putative protein in lys 3'region;locus_tag=GCA000012185_01745;product=putative protein in lys 3'region;Parent=GCA000012185_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272669.1,SO:0001217,UniParc:UPI00003CDB1F,UniRef:UniRef100_A0AAJ8WRQ4,UniRef:UniRef50_P51736,UniRef:UniRef90_P51736
contig_1	Pyrodigal	gene	1708426	1710948	.	-	.	ID=GCA000012185_01746_gene;locus_tag=GCA000012185_01746
contig_1	Pyrodigal	CDS	1708426	1710948	.	-	0	ID=GCA000012185_01746;Name=putative tail fiber protein;locus_tag=GCA000012185_01746;product=putative tail fiber protein;Parent=GCA000012185_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5301,COG:X,RefSeq:WP_011272670.1,SO:0001217,UniParc:UPI000053E2BC,UniRef:UniRef100_Q4QK27,UniRef:UniRef50_P51735,UniRef:UniRef90_Q4QK27
contig_1	Pyrodigal	gene	1710957	1711496	.	-	.	ID=GCA000012185_01747_gene;locus_tag=GCA000012185_01747;gene=gpI
contig_1	Pyrodigal	CDS	1710957	1711496	.	-	0	ID=GCA000012185_01747;Name=phage tail protein I;locus_tag=GCA000012185_01747;product=phage tail protein I;Dbxref=GO:0005198,GO:0016032,GO:0044423;gene=gpI;Parent=GCA000012185_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4385,COG:X,SO:0001217,UniParc:UPI0005BE9F0F,UniRef:UniRef100_A0A2S9RH19,UniRef:UniRef50_A0A4Y9K5E9,UniRef:UniRef90_A0A0M1GMH9
contig_1	Pyrodigal	gene	1711483	1712397	.	-	.	ID=GCA000012185_01748_gene;locus_tag=GCA000012185_01748
contig_1	Pyrodigal	CDS	1711483	1712397	.	-	0	ID=GCA000012185_01748;Name=Baseplate assembly protein;locus_tag=GCA000012185_01748;product=Baseplate assembly protein;Parent=GCA000012185_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3948,COG:X,RefSeq:WP_011272672.1,SO:0001217,UniParc:UPI00003CD763,UniRef:UniRef100_A0AAJ8WCI9,UniRef:UniRef50_A0A0C5EI25,UniRef:UniRef90_A0A0M1GLU3
contig_1	Pyrodigal	gene	1712394	1712732	.	-	.	ID=GCA000012185_01749_gene;locus_tag=GCA000012185_01749
contig_1	Pyrodigal	CDS	1712394	1712732	.	-	0	ID=GCA000012185_01749;Name=Baseplate assembly protein W;locus_tag=GCA000012185_01749;product=Baseplate assembly protein W;Parent=GCA000012185_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3628,COG:X,KEGG:K06903,RefSeq:WP_005633786.1,SO:0001217,UniParc:UPI00003CD762,UniRef:UniRef100_A0A2S9S4R4,UniRef:UniRef50_A0A2S9S4R4,UniRef:UniRef90_A0A2S9S4R4
contig_1	Pyrodigal	gene	1712734	1713327	.	-	.	ID=GCA000012185_01750_gene;locus_tag=GCA000012185_01750;gene=gpV
contig_1	Pyrodigal	CDS	1712734	1713327	.	-	0	ID=GCA000012185_01750;Name=Phage baseplate assembly protein V;locus_tag=GCA000012185_01750;product=Phage baseplate assembly protein V;gene=gpV;Parent=GCA000012185_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4540,COG:X,SO:0001217,UniParc:UPI00003CD761,UniRef:UniRef100_A0A3E1QGL2,UniRef:UniRef50_A0AAJ3K2A4,UniRef:UniRef90_A0A3E1QGL2
contig_1	Pyrodigal	gene	1713437	1713865	.	-	.	ID=GCA000012185_01751_gene;locus_tag=GCA000012185_01751
contig_1	Pyrodigal	CDS	1713437	1713865	.	-	0	ID=GCA000012185_01751;Name=hypothetical protein;locus_tag=GCA000012185_01751;product=hypothetical protein;Parent=GCA000012185_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653088.1,SO:0001217,UniParc:UPI000039A9DA,UniRef:UniRef100_A0A0C5F1T1,UniRef:UniRef50_A0A0M1GM02,UniRef:UniRef90_A0A0C5F1T1
contig_1	Pyrodigal	gene	1713874	1714431	.	-	.	ID=GCA000012185_01752_gene;locus_tag=GCA000012185_01752
contig_1	Pyrodigal	CDS	1713874	1714431	.	-	0	ID=GCA000012185_01752;Name=hypothetical protein;locus_tag=GCA000012185_01752;product=hypothetical protein;Parent=GCA000012185_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272674.1,SO:0001217,UniParc:UPI00003CD760,UniRef:UniRef100_A0A2R3FY75,UniRef:UniRef50_A0A0M1GMI4,UniRef:UniRef90_A0A2R3FY75
contig_1	Pyrodigal	gene	1714529	1714981	.	-	.	ID=GCA000012185_01753_gene;locus_tag=GCA000012185_01753
contig_1	Pyrodigal	CDS	1714529	1714981	.	-	0	ID=GCA000012185_01753;Name=hypothetical protein;locus_tag=GCA000012185_01753;product=hypothetical protein;Parent=GCA000012185_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_006995348.1,SO:0001217,UniParc:UPI000053E2BE,UniRef:UniRef100_A0A1B8PHK6,UniRef:UniRef50_A0A0J5S0U5,UniRef:UniRef90_A0A1B8PHK6
contig_1	Pyrodigal	gene	1714959	1715126	.	-	.	ID=GCA000012185_01754_gene;locus_tag=GCA000012185_01754
contig_1	Pyrodigal	CDS	1714959	1715126	.	-	0	ID=GCA000012185_01754;Name=hypothetical protein;locus_tag=GCA000012185_01754;product=hypothetical protein;Parent=GCA000012185_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_162836930.1,SO:0001217,UniParc:UPI0002F96893,UniRef:UniRef100_Q4QK19,UniRef:UniRef50_Q4QK19,UniRef:UniRef90_Q4QK19
contig_1	Pyrodigal	gene	1715203	1717167	.	-	.	ID=GCA000012185_01755_gene;locus_tag=GCA000012185_01755
contig_1	Pyrodigal	CDS	1715203	1717167	.	-	0	ID=GCA000012185_01755;Name=Phage tail tape measure protein;locus_tag=GCA000012185_01755;product=Phage tail tape measure protein;Parent=GCA000012185_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272676.1,SO:0001217,UniParc:UPI000053E2C0,UniRef:UniRef100_A0AAJ8WCK4,UniRef:UniRef50_A0AAJ8WCK4,UniRef:UniRef90_A0AAJ8WCK4
contig_1	Pyrodigal	gene	1717210	1717977	.	-	.	ID=GCA000012185_01756_gene;locus_tag=GCA000012185_01756
contig_1	Pyrodigal	CDS	1717210	1717977	.	-	0	ID=GCA000012185_01756;Name=Phage tail tape measure protein;locus_tag=GCA000012185_01756;product=Phage tail tape measure protein;Parent=GCA000012185_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272677.1,SO:0001217,UniParc:UPI000053E2C1,UniRef:UniRef100_Q4QK17,UniRef:UniRef50_Q4QK17,UniRef:UniRef90_Q4QK17
contig_1	Pyrodigal	gene	1718049	1718360	.	+	.	ID=GCA000012185_01757_gene;locus_tag=GCA000012185_01757
contig_1	Pyrodigal	CDS	1718049	1718360	.	+	0	ID=GCA000012185_01757;Name=hypothetical protein;locus_tag=GCA000012185_01757;product=hypothetical protein;Parent=GCA000012185_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CDB98,UniRef:UniRef100_A0A2R3G476,UniRef:UniRef50_A0A0M1GLU8,UniRef:UniRef90_A0A0M1GLU8
contig_1	Pyrodigal	gene	1718486	1718584	.	-	.	ID=GCA000012185_01758_gene;locus_tag=GCA000012185_01758
contig_1	Pyrodigal	CDS	1718486	1718584	.	-	0	ID=GCA000012185_01758;Name=hypothetical protein;locus_tag=GCA000012185_01758;product=hypothetical protein;Parent=GCA000012185_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A158SWL3,UniRef:UniRef90_A0A158SWL3
contig_1	Pyrodigal	gene	1718657	1719004	.	+	.	ID=GCA000012185_01759_gene;locus_tag=GCA000012185_01759
contig_1	Pyrodigal	CDS	1718657	1719004	.	+	0	ID=GCA000012185_01759;Name=hypothetical protein;locus_tag=GCA000012185_01759;product=hypothetical protein;Parent=GCA000012185_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005653079.1,SO:0001217,UniParc:UPI000053E2C4,UniRef:UniRef100_A0A0D0HRA3,UniRef:UniRef50_A0A0D0HRA3,UniRef:UniRef90_A0A0D0HRA3
contig_1	Pyrodigal	gene	1719005	1719466	.	-	.	ID=GCA000012185_01760_gene;locus_tag=GCA000012185_01760
contig_1	Pyrodigal	CDS	1719005	1719466	.	-	0	ID=GCA000012185_01760;Name=phage virion morphogenesis protein;locus_tag=GCA000012185_01760;product=phage virion morphogenesis protein;Dbxref=GO:0005198,GO:0016032,GO:0044423;Parent=GCA000012185_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272680.1,SO:0001217,UniParc:UPI000053E2C5,UniRef:UniRef100_A0A2R3FY63,UniRef:UniRef50_A0A0A2Y0P0,UniRef:UniRef90_A0A2R3FY63
contig_1	Pyrodigal	gene	1719466	1719936	.	-	.	ID=GCA000012185_01761_gene;locus_tag=GCA000012185_01761
contig_1	Pyrodigal	CDS	1719466	1719936	.	-	0	ID=GCA000012185_01761;Name=Phage tail protein;locus_tag=GCA000012185_01761;product=Phage tail protein;Parent=GCA000012185_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_038441089.1,SO:0001217,UniParc:UPI0002F4444C,UniRef:UniRef100_A0A2R3FY64,UniRef:UniRef50_A4P0H8,UniRef:UniRef90_A4P0H8
contig_1	Pyrodigal	gene	1720042	1720164	.	-	.	ID=GCA000012185_01762_gene;locus_tag=GCA000012185_01762
contig_1	Pyrodigal	CDS	1720042	1720164	.	-	0	ID=GCA000012185_01762;Name=hypothetical protein;locus_tag=GCA000012185_01762;product=hypothetical protein;Parent=GCA000012185_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272683.1,SO:0001217,UniParc:UPI000053E2C8,UniRef:UniRef100_Q4QK10,UniRef:UniRef50_Q4QK10,UniRef:UniRef90_Q4QK10
contig_1	Pyrodigal	gene	1720161	1720376	.	-	.	ID=GCA000012185_01763_gene;locus_tag=GCA000012185_01763;gene=dksA
contig_1	Pyrodigal	CDS	1720161	1720376	.	-	0	ID=GCA000012185_01763;Name=Zinc finger DksA/TraR C4-type domain-containing protein;locus_tag=GCA000012185_01763;product=Zinc finger DksA/TraR C4-type domain-containing protein;gene=dksA;Parent=GCA000012185_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1734,COG:K,RefSeq:WP_005672208.1,SO:0001217,UniParc:UPI00003CDB44,UniRef:UniRef100_A0A2S9S9F5,UniRef:UniRef50_A0A0D0IGX7,UniRef:UniRef90_A0A0D0IGX7
contig_1	Pyrodigal	gene	1720551	1720901	.	-	.	ID=GCA000012185_01764_gene;locus_tag=GCA000012185_01764;gene=chiY
contig_1	Pyrodigal	CDS	1720551	1720901	.	-	0	ID=GCA000012185_01764;Name=Chemotaxis protein;locus_tag=GCA000012185_01764;product=Chemotaxis protein;gene=chiY;Parent=GCA000012185_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6079,COG:U,RefSeq:WP_011272684.1,SO:0001217,UniParc:UPI000053E2C9,UniRef:UniRef100_Q4QK08,UniRef:UniRef50_A0A1A7P3X6,UniRef:UniRef90_Q4QK08
contig_1	Pyrodigal	gene	1720886	1721404	.	-	.	ID=GCA000012185_01765_gene;locus_tag=GCA000012185_01765
contig_1	Pyrodigal	CDS	1720886	1721404	.	-	0	ID=GCA000012185_01765;Name=Lysozyme;locus_tag=GCA000012185_01765;product=Lysozyme;Parent=GCA000012185_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668462.1,SO:0001217,UniParc:UPI000039A9E2,UniRef:UniRef100_Q4QK07,UniRef:UniRef90_A0A8S5V0M5
contig_1	Pyrodigal	gene	1721397	1721618	.	-	.	ID=GCA000012185_01766_gene;locus_tag=GCA000012185_01766
contig_1	Pyrodigal	CDS	1721397	1721618	.	-	0	ID=GCA000012185_01766;Name=Lysis protein;locus_tag=GCA000012185_01766;product=Lysis protein;Parent=GCA000012185_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668464.1,SO:0001217,UniParc:UPI000039A9E3,UniRef:UniRef100_Q4QK06,UniRef:UniRef50_Q4QK06,UniRef:UniRef90_Q4QK06
contig_1	Pyrodigal	gene	1721620	1721829	.	-	.	ID=GCA000012185_01767_gene;locus_tag=GCA000012185_01767;gene=gpX
contig_1	Pyrodigal	CDS	1721620	1721829	.	-	0	ID=GCA000012185_01767;Name=Phage Tail Protein X;locus_tag=GCA000012185_01767;product=Phage Tail Protein X;gene=gpX;Parent=GCA000012185_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5004,COG:X,RefSeq:WP_005668467.1,SO:0001217,UniParc:UPI000039A9E4,UniRef:UniRef100_A0A1B8PHH8,UniRef:UniRef50_A0A2S9RNE6,UniRef:UniRef90_A0A2S9RNE6
contig_1	Pyrodigal	gene	1721829	1722335	.	-	.	ID=GCA000012185_01768_gene;locus_tag=GCA000012185_01768
contig_1	Pyrodigal	CDS	1721829	1722335	.	-	0	ID=GCA000012185_01768;Name=Phage head completion protein (GPL);locus_tag=GCA000012185_01768;product=Phage head completion protein (GPL);Parent=GCA000012185_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668469.1,SO:0001217,UniParc:UPI000039A9E5,UniRef:UniRef100_Q4QK04,UniRef:UniRef50_Q4QK04,UniRef:UniRef90_Q4QK04
contig_1	Pyrodigal	gene	1722629	1723279	.	-	.	ID=GCA000012185_01769_gene;locus_tag=GCA000012185_01769
contig_1	Pyrodigal	CDS	1722629	1723279	.	-	0	ID=GCA000012185_01769;Name=Terminase;locus_tag=GCA000012185_01769;product=Terminase;Parent=GCA000012185_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272685.1,SO:0001217,UniParc:UPI000017D284,UniRef:UniRef100_A0A158SWK1,UniRef:UniRef50_A0A9X4G5A0,UniRef:UniRef90_Q6J5B7
contig_1	Pyrodigal	gene	1723291	1724340	.	-	.	ID=GCA000012185_01770_gene;locus_tag=GCA000012185_01770
contig_1	Pyrodigal	CDS	1723291	1724340	.	-	0	ID=GCA000012185_01770;Name=phage major capsid protein%2C P2 family;locus_tag=GCA000012185_01770;product=phage major capsid protein%2C P2 family;Dbxref=GO:0005198,GO:0019028,GO:0019069;Parent=GCA000012185_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005668475.1,SO:0001217,UniParc:UPI000017D283,UniRef:UniRef100_A0A3E1QGN2,UniRef:UniRef50_B6XAF2,UniRef:UniRef90_A0A3E1QGN2
contig_1	Pyrodigal	gene	1724361	1725176	.	-	.	ID=GCA000012185_01771_gene;locus_tag=GCA000012185_01771
contig_1	Pyrodigal	CDS	1724361	1725176	.	-	0	ID=GCA000012185_01771;Name=Phage capsid scaffolding protein;locus_tag=GCA000012185_01771;product=Phage capsid scaffolding protein;Parent=GCA000012185_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272686.1,SO:0001217,UniParc:UPI000017D282,UniRef:UniRef100_Q6J5G6,UniRef:UniRef50_A0A0M1GNF6,UniRef:UniRef90_A0A0M1GNF6
contig_1	Pyrodigal	gene	1725341	1727122	.	+	.	ID=GCA000012185_01772_gene;locus_tag=GCA000012185_01772;gene=yjcR
contig_1	Pyrodigal	CDS	1725341	1727122	.	+	0	ID=GCA000012185_01772;Name=Terminase;locus_tag=GCA000012185_01772;product=Terminase;gene=yjcR;Parent=GCA000012185_01772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5484,COG:S,RefSeq:WP_011272687.1,SO:0001217,UniParc:UPI00003CDA6D,UniRef:UniRef100_Q4QK00,UniRef:UniRef50_A0A0D0IKV3,UniRef:UniRef90_A0A0D0IKV3
contig_1	Pyrodigal	gene	1727132	1728142	.	+	.	ID=GCA000012185_01773_gene;locus_tag=GCA000012185_01773
contig_1	Pyrodigal	CDS	1727132	1728142	.	+	0	ID=GCA000012185_01773;Name=Phage portal protein;locus_tag=GCA000012185_01773;product=Phage portal protein;Parent=GCA000012185_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272688.1,SO:0001217,UniParc:UPI000017D280,UniRef:UniRef100_A0A2R3G5B7,UniRef:UniRef90_A0A8S5Q1G1
contig_1	Pyrodigal	gene	1728850	1729524	.	-	.	ID=GCA000012185_01774_gene;locus_tag=GCA000012185_01774;gene=neuA
contig_1	Pyrodigal	CDS	1728850	1729524	.	-	0	ID=GCA000012185_01774;Name=acylneuraminate cytidylyltransferase;locus_tag=GCA000012185_01774;product=acylneuraminate cytidylyltransferase;Dbxref=GO:0005737,GO:0008781;gene=neuA;Parent=GCA000012185_01774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1083,COG:M,RefSeq:WP_011272689.1,SO:0001217,UniParc:UPI000053E2CA,UniRef:UniRef100_A0A346KAV3,UniRef:UniRef50_Q57140,UniRef:UniRef90_Q57140,VFDB:VFC0258,VFDB:VFG013424;ec_number=2.7.7.43
contig_1	Pyrodigal	gene	1729638	1730300	.	+	.	ID=GCA000012185_01775_gene;locus_tag=GCA000012185_01775;gene=nfnB
contig_1	Pyrodigal	CDS	1729638	1730300	.	+	0	ID=GCA000012185_01775;Name=Putative NAD(P)H nitroreductase;locus_tag=GCA000012185_01775;product=Putative NAD(P)H nitroreductase;Dbxref=GO:0005829,GO:0016491,GO:0046256;gene=nfnB;Parent=GCA000012185_01775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_011272690.1,SO:0001217,UniParc:UPI000053E2CB,UniRef:UniRef100_A0AAJ8WRQ3,UniRef:UniRef50_Q57431,UniRef:UniRef90_Q57431;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1730347	1731459	.	-	.	ID=GCA000012185_01776_gene;locus_tag=GCA000012185_01776;gene=apbC
contig_1	Pyrodigal	CDS	1730347	1731459	.	-	0	ID=GCA000012185_01776;Name=iron-sulfur cluster carrier protein ApbC;locus_tag=GCA000012185_01776;product=iron-sulfur cluster carrier protein ApbC;Dbxref=GO:0005524,GO:0005829,GO:0016226,GO:0016887,GO:0046872,GO:0051536,GO:0051539,GO:0140663;gene=apbC;Parent=GCA000012185_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_011272691.1,SO:0001217,UniParc:UPI0001545ABB,UniRef:UniRef100_Q4QJZ6,UniRef:UniRef50_P45135,UniRef:UniRef90_P45135
contig_1	Pyrodigal	gene	1731610	1733658	.	+	.	ID=GCA000012185_01777_gene;locus_tag=GCA000012185_01777;gene=metG
contig_1	Pyrodigal	CDS	1731610	1733658	.	+	0	ID=GCA000012185_01777;Name=methionine--tRNA ligase;locus_tag=GCA000012185_01777;product=methionine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004825,GO:0005524,GO:0005829,GO:0006431,GO:0046872;gene=metG;Parent=GCA000012185_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0143,COG:J,RefSeq:WP_011272692.1,SO:0001217,UniParc:UPI000053E2CC,UniRef:UniRef100_Q4QJZ5,UniRef:UniRef50_Q5ZRJ9,UniRef:UniRef90_P43828;ec_number=6.1.1.10
contig_1	Pyrodigal	gene	1733769	1734629	.	+	.	ID=GCA000012185_01778_gene;locus_tag=GCA000012185_01778;gene=tehB
contig_1	Pyrodigal	CDS	1733769	1734629	.	+	0	ID=GCA000012185_01778;Name=SAM-dependent methyltransferase TehB;locus_tag=GCA000012185_01778;product=SAM-dependent methyltransferase TehB;Dbxref=GO:0005737,GO:0008168,GO:0008757,GO:0032259,GO:0046690;gene=tehB;Parent=GCA000012185_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3615,COG:P,RefSeq:WP_011272693.1,SO:0001217,UniParc:UPI000053E2CD,UniRef:UniRef100_A0A2S9RIX1,UniRef:UniRef50_E1X791,UniRef:UniRef90_E1X791;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1734673	1735374	.	-	.	ID=GCA000012185_01779_gene;locus_tag=GCA000012185_01779;gene=gloB
contig_1	Pyrodigal	CDS	1734673	1735374	.	-	0	ID=GCA000012185_01779;Name=hydroxyacylglutathione hydrolase;locus_tag=GCA000012185_01779;product=hydroxyacylglutathione hydrolase;Dbxref=GO:0004416,GO:0019243,GO:0046872;gene=gloB;Parent=GCA000012185_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_011272694.1,SO:0001217,UniParc:UPI00003CDA5F,UniRef:UniRef100_Q4QJZ3,UniRef:UniRef50_P71374,UniRef:UniRef90_P71374;ec_number=3.1.2.6
contig_1	Pyrodigal	gene	1735426	1736232	.	-	.	ID=GCA000012185_01780_gene;locus_tag=GCA000012185_01780;gene=cobL
contig_1	Pyrodigal	CDS	1735426	1736232	.	-	0	ID=GCA000012185_01780;Name=putative protein HI_1273;locus_tag=GCA000012185_01780;product=putative protein HI_1273;gene=cobL;Parent=GCA000012185_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2242,COG:H,RefSeq:WP_011272695.1,SO:0001217,UniParc:UPI00003CDA5E,UniRef:UniRef100_A0AAJ8WCD5,UniRef:UniRef50_P44150,UniRef:UniRef90_P44150
contig_1	Pyrodigal	gene	1736468	1736944	.	+	.	ID=GCA000012185_01781_gene;locus_tag=GCA000012185_01781
contig_1	Pyrodigal	CDS	1736468	1736944	.	+	0	ID=GCA000012185_01781;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000012185_01781;product=HTH araC/xylS-type domain-containing protein;Parent=GCA000012185_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005687298.1,SO:0001217,UniParc:UPI00003CDA5D,UniRef:UniRef100_A0A2R3GQ32,UniRef:UniRef50_E6KXQ9,UniRef:UniRef90_A0A502JQC0
contig_1	Pyrodigal	gene	1737081	1738844	.	+	.	ID=GCA000012185_01782_gene;locus_tag=GCA000012185_01782;gene=ycaO
contig_1	Pyrodigal	CDS	1737081	1738844	.	+	0	ID=GCA000012185_01782;Name=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;locus_tag=GCA000012185_01782;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;gene=ycaO;Parent=GCA000012185_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1944,COG:J,KEGG:K09136,RefSeq:WP_005687300.1,SO:0001217,UniParc:UPI000053E2CE,UniRef:UniRef100_A0A2R3GQ43,UniRef:UniRef50_P75838,UniRef:UniRef90_P44144
contig_1	Pyrodigal	gene	1739444	1742086	.	+	.	ID=GCA000012185_01783_gene;locus_tag=GCA000012185_01783;gene=gyrA
contig_1	Pyrodigal	CDS	1739444	1742086	.	+	0	ID=GCA000012185_01783;Name=DNA topoisomerase (ATP-hydrolyzing) subunit A;locus_tag=GCA000012185_01783;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;Dbxref=GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0009330,GO:0034335;gene=gyrA;Parent=GCA000012185_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_005689853.1,SO:0001217,UniParc:UPI000053E2CF,UniRef:UniRef100_A0A2R3FYS1,UniRef:UniRef50_P14829,UniRef:UniRef90_P43700;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1742141	1743217	.	-	.	ID=GCA000012185_01784_gene;locus_tag=GCA000012185_01784;gene=metXA
contig_1	Pyrodigal	CDS	1742141	1743217	.	-	0	ID=GCA000012185_01784;Name=homoserine O-acetyltransferase;locus_tag=GCA000012185_01784;product=homoserine O-acetyltransferase;Dbxref=GO:0004414,GO:0005737,GO:0009058,GO:0009086,GO:0016747;gene=metXA;Parent=GCA000012185_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2021,COG:E,RefSeq:WP_005689855.1,SO:0001217,UniParc:UPI00003CDC34,UniRef:UniRef100_Q4QJY8,UniRef:UniRef50_P45131,UniRef:UniRef90_P45131;ec_number=2.3.1.31
contig_1	Pyrodigal	gene	1743387	1744055	.	+	.	ID=GCA000012185_01785_gene;locus_tag=GCA000012185_01785;gene=sanA
contig_1	Pyrodigal	CDS	1743387	1744055	.	+	0	ID=GCA000012185_01785;Name=Protein SanA-like protein;locus_tag=GCA000012185_01785;product=Protein SanA-like protein;Dbxref=GO:0005886;gene=sanA;Parent=GCA000012185_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2949,COG:M,KEGG:K03748,SO:0001217,UniParc:UPI0005BEF5B2,UniRef:UniRef100_Q4QJY7,UniRef:UniRef50_P45130,UniRef:UniRef90_P45130
contig_1	Pyrodigal	gene	1744343	1745647	.	-	.	ID=GCA000012185_01786_gene;locus_tag=GCA000012185_01786;gene=folC
contig_1	Pyrodigal	CDS	1744343	1745647	.	-	0	ID=GCA000012185_01786;Name=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;locus_tag=GCA000012185_01786;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;Dbxref=GO:0004326,GO:0005524,GO:0005737,GO:0006730,GO:0008841,GO:0009396,GO:0016874,GO:0046654,GO:0046656,GO:0046872;gene=folC;Parent=GCA000012185_01786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_038441072.1,SO:0001217,UniParc:UPI000300963D,UniRef:UniRef100_A0A346KAU1,UniRef:UniRef50_P43775,UniRef:UniRef90_P43775;ec_number=6.3.2.17
contig_1	Pyrodigal	gene	1745649	1746539	.	-	.	ID=GCA000012185_01787_gene;locus_tag=GCA000012185_01787;gene=accD
contig_1	Pyrodigal	CDS	1745649	1746539	.	-	0	ID=GCA000012185_01787;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA000012185_01787;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0008270,GO:0009317,GO:0009329,GO:0016743,GO:0017148,GO:2001295;gene=accD;Parent=GCA000012185_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_005694317.1,SO:0001217,UniParc:UPI00001251B7,UniRef:UniRef100_P43778,UniRef:UniRef50_Q2NSI3,UniRef:UniRef90_P43778;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1746733	1748124	.	+	.	ID=GCA000012185_01788_gene;locus_tag=GCA000012185_01788;gene=degQ
contig_1	Pyrodigal	CDS	1746733	1748124	.	+	0	ID=GCA000012185_01788;Name=putative periplasmic serine protease do/HhoA-like;locus_tag=GCA000012185_01788;product=putative periplasmic serine protease do/HhoA-like;Dbxref=GO:0004252,GO:0006515,GO:0042597;gene=degQ;Parent=GCA000012185_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_011272698.1,SO:0001217,UniParc:UPI000053E2D2,UniRef:UniRef100_A0A2R3FY15,UniRef:UniRef50_P39099,UniRef:UniRef90_P45129;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1748177	1751617	.	-	.	ID=GCA000012185_01789_gene;locus_tag=GCA000012185_01789;gene=mfd
contig_1	Pyrodigal	CDS	1748177	1751617	.	-	0	ID=GCA000012185_01789;Name=transcription-repair coupling factor;locus_tag=GCA000012185_01789;product=transcription-repair coupling factor;Dbxref=GO:0000716,GO:0003676,GO:0003677,GO:0003684,GO:0004386,GO:0005524,GO:0005737,GO:0006281,GO:0006355,GO:0015616,GO:0016787,GO:0043175;gene=mfd;Parent=GCA000012185_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1197,COG:LK,KEGG:K03723,RefSeq:WP_011272699.1,SO:0001217,UniParc:UPI000053E2D3,UniRef:UniRef100_Q4QJY3,UniRef:UniRef50_P45128,UniRef:UniRef90_P45128;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1751719	1751892	.	-	.	ID=GCA000012185_01790_gene;locus_tag=GCA000012185_01790
contig_1	Pyrodigal	CDS	1751719	1751892	.	-	0	ID=GCA000012185_01790;Name=putative protein HI_1257;locus_tag=GCA000012185_01790;product=putative protein HI_1257;Parent=GCA000012185_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272700.1,SO:0001217,UniParc:UPI00003CD7C3,UniRef:UniRef100_A0AB34I8J2,UniRef:UniRef50_P44143,UniRef:UniRef90_P44143
contig_1	Pyrodigal	gene	1751889	1753859	.	-	.	ID=GCA000012185_01791_gene;locus_tag=GCA000012185_01791;gene=tmcA
contig_1	Pyrodigal	CDS	1751889	1753859	.	-	0	ID=GCA000012185_01791;Name=tRNA(Met) cytidine acetyltransferase TmcA;locus_tag=GCA000012185_01791;product=tRNA(Met) cytidine acetyltransferase TmcA;Dbxref=GO:0000049,GO:0002101,GO:0005524,GO:0005737,GO:0051391,GO:0051392;gene=tmcA;Parent=GCA000012185_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1444,COG:J,RefSeq:WP_011272701.1,SO:0001217,UniParc:UPI000053E2D4,UniRef:UniRef100_Q4QJY1,UniRef:UniRef50_P44140,UniRef:UniRef90_P44140;ec_number=2.3.1.193
contig_1	Pyrodigal	gene	1753864	1754205	.	-	.	ID=GCA000012185_01792_gene;locus_tag=GCA000012185_01792;gene=sirB2
contig_1	Pyrodigal	CDS	1753864	1754205	.	-	0	ID=GCA000012185_01792;Name=Protein HI_1253;locus_tag=GCA000012185_01792;product=Protein HI_1253;Dbxref=GO:0005886;gene=sirB2;Parent=GCA000012185_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3094,COG:S,RefSeq:WP_005652996.1,SO:0001217,UniParc:UPI00003CD7C0,UniRef:UniRef100_A0A346K0X7,UniRef:UniRef50_P44139,UniRef:UniRef90_P44139
contig_1	Pyrodigal	gene	1754267	1755937	.	-	.	ID=GCA000012185_01793_gene;locus_tag=GCA000012185_01793;gene=ettA
contig_1	Pyrodigal	CDS	1754267	1755937	.	-	0	ID=GCA000012185_01793;Name=energy-dependent translational throttle protein EttA;locus_tag=GCA000012185_01793;product=energy-dependent translational throttle protein EttA;Dbxref=GO:0000049,GO:0003689,GO:0005524,GO:0005737,GO:0006412,GO:0016887,GO:0019843,GO:0043022,GO:0045900,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ettA;Parent=GCA000012185_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_005650218.1,SO:0001217,UniParc:UPI000013B5CE,UniRef:UniRef100_P45127,UniRef:UniRef50_P45127,UniRef:UniRef90_P45127;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1756100	1756423	.	-	.	ID=GCA000012185_01794_gene;locus_tag=GCA000012185_01794;gene=higA
contig_1	Pyrodigal	CDS	1756100	1756423	.	-	0	ID=GCA000012185_01794;Name=HigA family addiction module antitoxin;locus_tag=GCA000012185_01794;product=HigA family addiction module antitoxin;Dbxref=GO:0003677;gene=higA;Parent=GCA000012185_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3093,COG:V,RefSeq:WP_005650217.1,SO:0001217,UniParc:UPI000013A2BB,UniRef:UniRef100_Q57089,UniRef:UniRef50_Q57089,UniRef:UniRef90_Q57089
contig_1	Pyrodigal	gene	1756434	1756739	.	-	.	ID=GCA000012185_01795_gene;locus_tag=GCA000012185_01795;gene=higB
contig_1	Pyrodigal	CDS	1756434	1756739	.	-	0	ID=GCA000012185_01795;Name=putative protein HI_1250;locus_tag=GCA000012185_01795;product=putative protein HI_1250;gene=higB;Parent=GCA000012185_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3549,COG:V,RefSeq:WP_005650215.1,SO:0001217,UniParc:UPI00003CD7BE,UniRef:UniRef100_A0A0H3PGY4,UniRef:UniRef50_P44138,UniRef:UniRef90_P44138
contig_1	Pyrodigal	gene	1757064	1757684	.	+	.	ID=GCA000012185_01796_gene;locus_tag=GCA000012185_01796;gene=zevA
contig_1	Pyrodigal	CDS	1757064	1757684	.	+	0	ID=GCA000012185_01796;Name=zinc transporter binding subunit ZevA;locus_tag=GCA000012185_01796;product=zinc transporter binding subunit ZevA;gene=zevA;Parent=GCA000012185_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694310,COG:COG3683,COG:R,RefSeq:WP_005694310.1,SO:0001217,UniParc:UPI000013A4DD,UniRef:UniRef100_P44137,UniRef:UniRef50_P44137,UniRef:UniRef90_P44137
contig_1	Pyrodigal	gene	1757687	1758655	.	+	.	ID=GCA000012185_01797_gene;locus_tag=GCA000012185_01797;gene=zevB
contig_1	Pyrodigal	CDS	1757687	1758655	.	+	0	ID=GCA000012185_01797;Name=zinc transporter permease subunit ZevB;locus_tag=GCA000012185_01797;product=zinc transporter permease subunit ZevB;Dbxref=GO:0005886,GO:0006824,GO:0010045,GO:0015099,GO:0032025;gene=zevB;Parent=GCA000012185_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694309,COG:COG2215,COG:P,RefSeq:WP_011272702.1,SO:0001217,UniParc:UPI000053E2D5,UniRef:UniRef100_Q4QJX5,UniRef:UniRef50_P44136,UniRef:UniRef90_P44136
contig_1	tRNAscan-SE	gene	1758758	1758833	.	-	.	ID=GCA000012185_01798_gene;locus_tag=GCA000012185_01798;gene=trnN
contig_1	tRNAscan-SE	tRNA	1758758	1758833	.	-	.	ID=GCA000012185_01798;Name=tRNA-Asn(gtt);locus_tag=GCA000012185_01798;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000012185_01798_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1759269	1761308	.	+	.	ID=GCA000012185_01799_gene;locus_tag=GCA000012185_01799;gene=uvrB
contig_1	Pyrodigal	CDS	1759269	1761308	.	+	0	ID=GCA000012185_01799;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000012185_01799;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrB;Parent=GCA000012185_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,RefSeq:WP_011272703.1,SO:0001217,UniParc:UPI00003CD884,UniRef:UniRef100_Q4QJX4,UniRef:UniRef50_P0A8F8,UniRef:UniRef90_Q65ST2
contig_1	Pyrodigal	gene	1761338	1763281	.	-	.	ID=GCA000012185_01800_gene;locus_tag=GCA000012185_01800;gene=mdoB
contig_1	Pyrodigal	CDS	1761338	1763281	.	-	0	ID=GCA000012185_01800;Name=putative protein HI_1246;locus_tag=GCA000012185_01800;product=putative protein HI_1246;Dbxref=GO:0005886;gene=mdoB;Parent=GCA000012185_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1368,COG:M,SO:0001217,UniRef:UniRef50_P44135,UniRef:UniRef90_P44135
contig_1	Pyrodigal	gene	1763504	1765774	.	-	.	ID=GCA000012185_01801_gene;locus_tag=GCA000012185_01801;gene=maeB
contig_1	Pyrodigal	CDS	1763504	1765774	.	-	0	ID=GCA000012185_01801;Name=NADP-dependent malic enzyme;locus_tag=GCA000012185_01801;product=NADP-dependent malic enzyme;Dbxref=GO:0004473,GO:0006108,GO:0008948,GO:0016746,GO:0046872,GO:0051287;gene=maeB;Parent=GCA000012185_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_011272705.1,SO:0001217,UniParc:UPI00003CD886,UniRef:UniRef100_Q4QJX2,UniRef:UniRef50_P76558,UniRef:UniRef90_P43837;ec_number=1.1.1.40
contig_1	Pyrodigal	gene	1765972	1766592	.	+	.	ID=GCA000012185_01802_gene;locus_tag=GCA000012185_01802
contig_1	Pyrodigal	CDS	1765972	1766592	.	+	0	ID=GCA000012185_01802;Name=putative protein HI_1244;locus_tag=GCA000012185_01802;product=putative protein HI_1244;Parent=GCA000012185_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3955,COG:M,RefSeq:WP_011272706.1,SO:0001217,UniParc:UPI000053E2D7,UniRef:UniRef100_Q4QJX1,UniRef:UniRef50_P44134,UniRef:UniRef90_P44134
contig_1	Pyrodigal	gene	1766683	1767381	.	+	.	ID=GCA000012185_01803_gene;locus_tag=GCA000012185_01803;gene=rsuA
contig_1	Pyrodigal	CDS	1766683	1767381	.	+	0	ID=GCA000012185_01803;Name=16S rRNA pseudouridine(516) synthase RsuA;locus_tag=GCA000012185_01803;product=16S rRNA pseudouridine(516) synthase RsuA;Dbxref=GO:0000455,GO:0003723,GO:0005829,GO:0009982,GO:0160136;gene=rsuA;Parent=GCA000012185_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_011272707.1,SO:0001217,UniParc:UPI000053E2D8,UniRef:UniRef100_Q4QJX0,UniRef:UniRef50_P45124,UniRef:UniRef90_P45124;ec_number=5.4.99.19
contig_1	Pyrodigal	gene	1767383	1768579	.	+	.	ID=GCA000012185_01804_gene;locus_tag=GCA000012185_01804;gene=bcr
contig_1	Pyrodigal	CDS	1767383	1768579	.	+	0	ID=GCA000012185_01804;Name=Bcr/CflA family multidrug efflux MFS transporter;locus_tag=GCA000012185_01804;product=Bcr/CflA family multidrug efflux MFS transporter;Dbxref=GO:0005886,GO:0015385,GO:0016020,GO:0042908,GO:0042910,GO:0046677,GO:1990961;gene=bcr;Parent=GCA000012185_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07552,RefSeq:WP_005689530.1,SO:0001217,UniParc:UPI000053E2D9,UniRef:UniRef100_A0AAJ8WCH3,UniRef:UniRef50_P45123,UniRef:UniRef90_P45123
contig_1	Pyrodigal	gene	1768611	1769411	.	-	.	ID=GCA000012185_01805_gene;locus_tag=GCA000012185_01805
contig_1	Pyrodigal	CDS	1768611	1769411	.	-	0	ID=GCA000012185_01805;Name=putative protein HI_1241;locus_tag=GCA000012185_01805;product=putative protein HI_1241;Dbxref=GO:0005886;Parent=GCA000012185_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272708.1,SO:0001217,UniParc:UPI00003CDA3F,UniRef:UniRef100_A0A854CYK3,UniRef:UniRef50_P44133,UniRef:UniRef90_P44133
contig_1	Pyrodigal	gene	1769509	1770171	.	+	.	ID=GCA000012185_01806_gene;locus_tag=GCA000012185_01806;gene=yadS
contig_1	Pyrodigal	CDS	1769509	1770171	.	+	0	ID=GCA000012185_01806;Name=UPF0126 membrane protein HI_1240;locus_tag=GCA000012185_01806;product=UPF0126 membrane protein HI_1240;Dbxref=GO:0005886;gene=yadS;Parent=GCA000012185_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2860,COG:P,RefSeq:WP_005652973.1,SO:0001217,UniParc:UPI000039A75B,UniRef:UniRef100_A0A0Y7IR29,UniRef:UniRef50_P45122,UniRef:UniRef90_P45122
contig_1	Pyrodigal	gene	1770192	1771445	.	+	.	ID=GCA000012185_01807_gene;locus_tag=GCA000012185_01807;gene=proA
contig_1	Pyrodigal	CDS	1770192	1771445	.	+	0	ID=GCA000012185_01807;Name=glutamate-5-semialdehyde dehydrogenase;locus_tag=GCA000012185_01807;product=glutamate-5-semialdehyde dehydrogenase;Dbxref=GO:0004350,GO:0005737,GO:0006561,GO:0016620,GO:0050661,GO:0055129;gene=proA;Parent=GCA000012185_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0014,COG:E,KEGG:K00147,RefSeq:WP_011272709.1,SO:0001217,UniParc:UPI000053E2DA,UniRef:UniRef100_Q4QJW6,UniRef:UniRef50_P07004,UniRef:UniRef90_P45121;ec_number=1.2.1.41
contig_1	Pyrodigal	gene	1771524	1772669	.	-	.	ID=GCA000012185_01808_gene;locus_tag=GCA000012185_01808;gene=dnaJ
contig_1	Pyrodigal	CDS	1771524	1772669	.	-	0	ID=GCA000012185_01808;Name=molecular chaperone DnaJ;locus_tag=GCA000012185_01808;product=molecular chaperone DnaJ;Dbxref=GO:0005515,GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000012185_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_011272710.1,SO:0001217,UniParc:UPI000053E2DB,UniRef:UniRef100_Q4QJW5,UniRef:UniRef50_P08622,UniRef:UniRef90_P43735;ec_number=1.8.4.-
contig_1	Pyrodigal	gene	1772756	1774663	.	-	.	ID=GCA000012185_01809_gene;locus_tag=GCA000012185_01809;gene=dnaK
contig_1	Pyrodigal	CDS	1772756	1774663	.	-	0	ID=GCA000012185_01809;Name=molecular chaperone DnaK;locus_tag=GCA000012185_01809;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0005829,GO:0006457,GO:0016887,GO:0031072,GO:0042026,GO:0044183,GO:0051082,GO:0051085,GO:0140662;gene=dnaK;Parent=GCA000012185_01809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_005694297.1,SO:0001217,UniParc:UPI00001685EC,UniRef:UniRef100_P43736,UniRef:UniRef50_P43736,UniRef:UniRef90_P43736
contig_1	Pyrodigal	gene	1774930	1776372	.	+	.	ID=GCA000012185_01810_gene;locus_tag=GCA000012185_01810;gene=ydgA
contig_1	Pyrodigal	CDS	1774930	1776372	.	+	0	ID=GCA000012185_01810;Name=putative protein HI_1235;locus_tag=GCA000012185_01810;product=putative protein HI_1235;gene=ydgA;Parent=GCA000012185_01810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5339,COG:S,RefSeq:WP_011272711.1,SO:0001217,UniParc:UPI000053E2DC,UniRef:UniRef100_A0A2R3G4E1,UniRef:UniRef50_P44131,UniRef:UniRef90_P44131
contig_1	Pyrodigal	gene	1776529	1776987	.	-	.	ID=GCA000012185_01811_gene;locus_tag=GCA000012185_01811;gene=mgsA
contig_1	Pyrodigal	CDS	1776529	1776987	.	-	0	ID=GCA000012185_01811;Name=methylglyoxal synthase;locus_tag=GCA000012185_01811;product=methylglyoxal synthase;Dbxref=GO:0005829,GO:0006007,GO:0008929,GO:0019242;gene=mgsA;Parent=GCA000012185_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1803,COG:G,RefSeq:WP_005687337.1,SO:0001217,UniParc:UPI000053E2DD,UniRef:UniRef100_Q4QJW2,UniRef:UniRef50_Q65UB4,UniRef:UniRef90_P45120;ec_number=4.2.3.3
contig_1	Pyrodigal	gene	1777287	1779947	.	+	.	ID=GCA000012185_01812_gene;locus_tag=GCA000012185_01812;gene=aceE
contig_1	Pyrodigal	CDS	1777287	1779947	.	+	0	ID=GCA000012185_01812;Name=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;locus_tag=GCA000012185_01812;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;Dbxref=GO:0004738,GO:0004739,GO:0006086,GO:0045254;gene=aceE;Parent=GCA000012185_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2609,KEGG:K00163,RefSeq:WP_011272712.1,SO:0001217,UniParc:UPI000053E2DE,UniRef:UniRef100_A0A2S9S9D3,UniRef:UniRef50_P45119,UniRef:UniRef90_P45119;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	1780010	1781707	.	+	.	ID=GCA000012185_01813_gene;locus_tag=GCA000012185_01813;gene=aceF
contig_1	Pyrodigal	CDS	1780010	1781707	.	+	0	ID=GCA000012185_01813;Name=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;locus_tag=GCA000012185_01813;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;Dbxref=GO:0004742,GO:0005737,GO:0006086,GO:0006096,GO:0016407,GO:0031405,GO:0045254;gene=aceF;Parent=GCA000012185_01813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_011272713.1,SO:0001217,UniParc:UPI000053E2DF,UniRef:UniRef100_Q4QJW0,UniRef:UniRef50_P45118,UniRef:UniRef90_P45118;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	1781821	1783245	.	+	.	ID=GCA000012185_01814_gene;locus_tag=GCA000012185_01814;gene=lpdA
contig_1	Pyrodigal	CDS	1781821	1783245	.	+	0	ID=GCA000012185_01814;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000012185_01814;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0050660;gene=lpdA;Parent=GCA000012185_01814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_011272714.1,SO:0001217,UniParc:UPI000053E2E0,UniRef:UniRef100_Q4QJV9,UniRef:UniRef50_P0A9P0,UniRef:UniRef90_P43784;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1783405	1783947	.	+	.	ID=GCA000012185_01815_gene;locus_tag=GCA000012185_01815;gene=apt
contig_1	Pyrodigal	CDS	1783405	1783947	.	+	0	ID=GCA000012185_01815;Name=adenine phosphoribosyltransferase;locus_tag=GCA000012185_01815;product=adenine phosphoribosyltransferase;Dbxref=GO:0003999,GO:0005829,GO:0006166,GO:0006168,GO:0044209;gene=apt;Parent=GCA000012185_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,RefSeq:WP_005650156.1,SO:0001217,UniParc:UPI0000125CD1,UniRef:UniRef100_P43856,UniRef:UniRef50_Q8ZC94,UniRef:UniRef90_P43856;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	1783959	1786025	.	+	.	ID=GCA000012185_01816_gene;locus_tag=GCA000012185_01816;gene=dnaX
contig_1	Pyrodigal	CDS	1783959	1786025	.	+	0	ID=GCA000012185_01816;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000012185_01816;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0006261,GO:0009360,GO:0016887,GO:0046872;gene=dnaX;Parent=GCA000012185_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,RefSeq:WP_011272715.1,SO:0001217,UniParc:UPI000053E2E2,UniRef:UniRef100_A0A2S9S975,UniRef:UniRef50_P43746,UniRef:UniRef90_P43746;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1786165	1786791	.	+	.	ID=GCA000012185_01817_gene;locus_tag=GCA000012185_01817;gene=upp
contig_1	Pyrodigal	CDS	1786165	1786791	.	+	0	ID=GCA000012185_01817;Name=uracil phosphoribosyltransferase;locus_tag=GCA000012185_01817;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000012185_01817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_005657618.1,SO:0001217,UniParc:UPI000053E2E3,UniRef:UniRef100_Q4QJV5,UniRef:UniRef50_P0A8F0,UniRef:UniRef90_P43857;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	1786895	1788139	.	+	.	ID=GCA000012185_01818_gene;locus_tag=GCA000012185_01818;gene=uraA
contig_1	Pyrodigal	CDS	1786895	1788139	.	+	0	ID=GCA000012185_01818;Name=putative uracil permease;locus_tag=GCA000012185_01818;product=putative uracil permease;Dbxref=GO:0005886,GO:0015505,GO:0098721;gene=uraA;Parent=GCA000012185_01818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,KEGG:K02824,RefSeq:WP_005657620.1,SO:0001217,UniParc:UPI000053E2E4,UniRef:UniRef100_A0A0H3PDW9,UniRef:UniRef50_P45117,UniRef:UniRef90_P45117
contig_1	Pyrodigal	gene	1788205	1788900	.	+	.	ID=GCA000012185_01819_gene;locus_tag=GCA000012185_01819;gene=hda
contig_1	Pyrodigal	CDS	1788205	1788900	.	+	0	ID=GCA000012185_01819;Name=DnaA regulatory inactivator Hda;locus_tag=GCA000012185_01819;product=DnaA regulatory inactivator Hda;Dbxref=GO:0003723,GO:0003724,GO:0006260,GO:0006270,GO:0016818,GO:0032297;gene=hda;Parent=GCA000012185_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K10763,RefSeq:WP_011272716.1,SO:0001217,UniParc:UPI000053E2E5,UniRef:UniRef100_A0A2S9S981,UniRef:UniRef50_O86235,UniRef:UniRef90_O86235
contig_1	Pyrodigal	gene	1788967	1789248	.	-	.	ID=GCA000012185_01820_gene;locus_tag=GCA000012185_01820
contig_1	Pyrodigal	CDS	1788967	1789248	.	-	0	ID=GCA000012185_01820;Name=putative translation initiation factor 1-like proterin;locus_tag=GCA000012185_01820;product=putative translation initiation factor 1-like proterin;Parent=GCA000012185_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000053E2E6,UniRef:UniRef100_Q4QJV2,UniRef:UniRef50_Q4QJV2,UniRef:UniRef90_Q4QJV2
contig_1	Pyrodigal	gene	1789255	1789947	.	-	.	ID=GCA000012185_01821_gene;locus_tag=GCA000012185_01821;gene=pyrF
contig_1	Pyrodigal	CDS	1789255	1789947	.	-	0	ID=GCA000012185_01821;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000012185_01821;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0005829,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA000012185_01821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,RefSeq:WP_005657628.1,SO:0001217,UniParc:UPI00003CD9A9,UniRef:UniRef100_Q4QJV1,UniRef:UniRef50_P43812,UniRef:UniRef90_P43812;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1789971	1791161	.	-	.	ID=GCA000012185_01822_gene;locus_tag=GCA000012185_01822;gene=lapB
contig_1	Pyrodigal	CDS	1789971	1791161	.	-	0	ID=GCA000012185_01822;Name=lipopolysaccharide assembly protein LapB;locus_tag=GCA000012185_01822;product=lipopolysaccharide assembly protein LapB;Dbxref=GO:0005506,GO:0008653,GO:0009898,GO:0046890;gene=lapB;Parent=GCA000012185_01822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005652936.1,SO:0001217,UniParc:UPI00003CD9A8,UniRef:UniRef100_A0A0D6GMG5,UniRef:UniRef50_P44130,UniRef:UniRef90_P44130
contig_1	Pyrodigal	gene	1791161	1791454	.	-	.	ID=GCA000012185_01823_gene;locus_tag=GCA000012185_01823;gene=lapA
contig_1	Pyrodigal	CDS	1791161	1791454	.	-	0	ID=GCA000012185_01823;Name=putative lipopolysaccharide assembly protein A;locus_tag=GCA000012185_01823;product=putative lipopolysaccharide assembly protein A;Dbxref=GO:0005886,GO:0008653;gene=lapA;Parent=GCA000012185_01823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3771,COG:M,RefSeq:WP_005652934.1,SO:0001217,UniParc:UPI000039ACA9,UniRef:UniRef100_A0A0C5FJU6,UniRef:UniRef50_P44129,UniRef:UniRef90_P44129
contig_1	Pyrodigal	gene	1791529	1791813	.	-	.	ID=GCA000012185_01824_gene;locus_tag=GCA000012185_01824;gene=ihfB
contig_1	Pyrodigal	CDS	1791529	1791813	.	-	0	ID=GCA000012185_01824;Name=integration host factor subunit beta;locus_tag=GCA000012185_01824;product=integration host factor subunit beta;Dbxref=GO:0003677,GO:0005694,GO:0005829,GO:0006310,GO:0006355,GO:0006417,GO:0030527;gene=ihfB;Parent=GCA000012185_01824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_011272718.1,SO:0001217,UniParc:UPI00003CD9A7,UniRef:UniRef100_Q4QJU8,UniRef:UniRef50_Q3IL99,UniRef:UniRef90_P43724
contig_1	Pyrodigal	gene	1791936	1793585	.	-	.	ID=GCA000012185_01825_gene;locus_tag=GCA000012185_01825;gene=rpsA
contig_1	Pyrodigal	CDS	1791936	1793585	.	-	0	ID=GCA000012185_01825;Name=30S ribosomal protein S1;locus_tag=GCA000012185_01825;product=30S ribosomal protein S1;Dbxref=GO:0003723,GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsA;Parent=GCA000012185_01825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_011272719.1,SO:0001217,UniParc:UPI000053E2E7,UniRef:UniRef100_A0A2S9S971,UniRef:UniRef50_P0AG67,UniRef:UniRef90_Q48082
contig_1	Pyrodigal	gene	1793688	1794359	.	-	.	ID=GCA000012185_01826_gene;locus_tag=GCA000012185_01826;gene=cmk
contig_1	Pyrodigal	CDS	1793688	1794359	.	-	0	ID=GCA000012185_01826;Name=(d)CMP kinase;locus_tag=GCA000012185_01826;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000012185_01826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,RefSeq:WP_038441048.1,SO:0001217,UniParc:UPI00003CD928,UniRef:UniRef100_Q4QJU6,UniRef:UniRef50_P0A6I0,UniRef:UniRef90_P43892;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	1794828	1795703	.	+	.	ID=GCA000012185_01827_gene;locus_tag=GCA000012185_01827;gene=pdxS
contig_1	Pyrodigal	CDS	1794828	1795703	.	+	0	ID=GCA000012185_01827;Name=pyridoxal 5'-phosphate synthase lyase subunit PdxS;locus_tag=GCA000012185_01827;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;Dbxref=GO:0006520,GO:0008615,GO:0036381,GO:0042819,GO:0042823;gene=pdxS;Parent=GCA000012185_01827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0214,COG:H,KEGG:K06215,RefSeq:WP_005654219.1,SO:0001217,UniParc:UPI000013AF96,UniRef:UniRef100_P45293,UniRef:UniRef50_Q8DP71,UniRef:UniRef90_Q8DP71;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	1795704	1796282	.	+	.	ID=GCA000012185_01828_gene;locus_tag=GCA000012185_01828;gene=pdxT
contig_1	Pyrodigal	CDS	1795704	1796282	.	+	0	ID=GCA000012185_01828;Name=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;locus_tag=GCA000012185_01828;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;Dbxref=GO:0004359,GO:0005829,GO:0006543,GO:0008614,GO:0016884,GO:0036381,GO:0042823,GO:1903600;gene=pdxT;Parent=GCA000012185_01828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0311,COG:H,KEGG:K08681,RefSeq:WP_005687358.1,SO:0001217,UniParc:UPI000019B32B,UniRef:UniRef100_P45294,UniRef:UniRef50_P45294,UniRef:UniRef90_P45294;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	1796831	1798525	.	-	.	ID=GCA000012185_01829_gene;locus_tag=GCA000012185_01829;gene=dld
contig_1	Pyrodigal	CDS	1796831	1798525	.	-	0	ID=GCA000012185_01829;Name=D-lactate dehydrogenase;locus_tag=GCA000012185_01829;product=D-lactate dehydrogenase;Dbxref=GO:0006089,GO:0016901,GO:0022904,GO:0031234,GO:0048038,GO:0055085,GO:0071949,GO:0102029;gene=dld;Parent=GCA000012185_01829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0277,KEGG:K03777,RefSeq:WP_011272721.1,SO:0001217,UniParc:UPI000053E2E9,UniRef:UniRef100_Q4QJU3,UniRef:UniRef50_P45295,UniRef:UniRef90_P45295;ec_number=1.1.5.12
contig_1	Pyrodigal	gene	1799430	1799981	.	-	.	ID=GCA000012185_01830_gene;locus_tag=GCA000012185_01830;gene=nlpC
contig_1	Pyrodigal	CDS	1799430	1799981	.	-	0	ID=GCA000012185_01830;Name=putative endopeptidase NlpC-like protein;locus_tag=GCA000012185_01830;product=putative endopeptidase NlpC-like protein;Dbxref=GO:0005886,GO:0006508,GO:0008234;gene=nlpC;Parent=GCA000012185_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_005659678.1,SO:0001217,UniParc:UPI000004A450,UniRef:UniRef100_P45296,UniRef:UniRef50_P45296,UniRef:UniRef90_P45296;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1800094	1801542	.	-	.	ID=GCA000012185_01831_gene;locus_tag=GCA000012185_01831;gene=tldD
contig_1	Pyrodigal	CDS	1800094	1801542	.	-	0	ID=GCA000012185_01831;Name=metalloprotease TldD;locus_tag=GCA000012185_01831;product=metalloprotease TldD;Dbxref=GO:0005829,GO:0006508,GO:0008237;gene=tldD;Parent=GCA000012185_01831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,KEGG:K03568,RefSeq:WP_011272722.1,SO:0001217,UniParc:UPI000053E2EA,UniRef:UniRef100_A0A2R3FXX9,UniRef:UniRef50_P0AGG8,UniRef:UniRef90_P45297;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1801644	1802495	.	-	.	ID=GCA000012185_01832_gene;locus_tag=GCA000012185_01832;gene=rsmI
contig_1	Pyrodigal	CDS	1801644	1802495	.	-	0	ID=GCA000012185_01832;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA000012185_01832;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0000451,GO:0005737,GO:0008649,GO:0008757,GO:0070677;gene=rsmI;Parent=GCA000012185_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0313,COG:J,KEGG:K07056,RefSeq:WP_005657649.1,SO:0001217,UniParc:UPI000053E2EB,UniRef:UniRef100_A0A0H3PCF7,UniRef:UniRef50_P67087,UniRef:UniRef90_P45298;ec_number=2.1.1.198
contig_1	Pyrodigal	gene	1802567	1804294	.	+	.	ID=GCA000012185_01833_gene;locus_tag=GCA000012185_01833;gene=lpoA
contig_1	Pyrodigal	CDS	1802567	1804294	.	+	0	ID=GCA000012185_01833;Name=Penicillin-binding protein activator LpoA;locus_tag=GCA000012185_01833;product=Penicillin-binding protein activator LpoA;Dbxref=GO:0008360,GO:0009252,GO:0030234,GO:0031241;gene=lpoA;Parent=GCA000012185_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3107,COG:M,RefSeq:WP_011272723.1,SO:0001217,UniParc:UPI000053E2EC,UniRef:UniRef100_Q4QJT8,UniRef:UniRef50_P45299,UniRef:UniRef90_P45299
contig_1	Pyrodigal	gene	1804294	1804653	.	+	.	ID=GCA000012185_01834_gene;locus_tag=GCA000012185_01834;gene=yraN
contig_1	Pyrodigal	CDS	1804294	1804653	.	+	0	ID=GCA000012185_01834;Name=YraN family protein;locus_tag=GCA000012185_01834;product=YraN family protein;Dbxref=GO:0003676,GO:0004518;gene=yraN;Parent=GCA000012185_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0792,COG:L,KEGG:K07460,RefSeq:WP_005654204.1,SO:0001217,UniParc:UPI000039A773,UniRef:UniRef100_Q4QJT7,UniRef:UniRef50_P45300,UniRef:UniRef90_P45300
contig_1	Pyrodigal	gene	1804666	1805250	.	+	.	ID=GCA000012185_01835_gene;locus_tag=GCA000012185_01835;gene=gmhA
contig_1	Pyrodigal	CDS	1804666	1805250	.	+	0	ID=GCA000012185_01835;Name=putative protein HI_1657;locus_tag=GCA000012185_01835;product=putative protein HI_1657;Dbxref=GO:0097367,GO:1901135;gene=gmhA;Parent=GCA000012185_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0279,COG:G,RefSeq:WP_005657655.1,SO:0001217,UniParc:UPI00003CDC64,UniRef:UniRef100_A0A0H3PLP6,UniRef:UniRef50_P52606,UniRef:UniRef90_P52606
contig_1	Pyrodigal	gene	1805307	1805888	.	+	.	ID=GCA000012185_01836_gene;locus_tag=GCA000012185_01836;gene=dolP
contig_1	Pyrodigal	CDS	1805307	1805888	.	+	0	ID=GCA000012185_01836;Name=division/outer membrane stress-associated lipid-binding lipoprotein;locus_tag=GCA000012185_01836;product=division/outer membrane stress-associated lipid-binding lipoprotein;Dbxref=GO:0006970,GO:0009279,GO:0030288;gene=dolP;Parent=GCA000012185_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2823,COG:M,KEGG:K04065,RefSeq:WP_005657657.1,SO:0001217,UniParc:UPI000013BF9D,UniRef:UniRef100_P45301,UniRef:UniRef50_P45301,UniRef:UniRef90_P45301
contig_1	Pyrodigal	gene	1806143	1808413	.	+	.	ID=GCA000012185_01837_gene;locus_tag=GCA000012185_01837;gene=nrdA
contig_1	Pyrodigal	CDS	1806143	1808413	.	+	0	ID=GCA000012185_01837;Name=class 1a ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000012185_01837;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0005971,GO:0006260,GO:0009263;gene=nrdA;Parent=GCA000012185_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_011272724.1,SO:0001217,UniParc:UPI000053E2ED,UniRef:UniRef100_A0AB37B7D1,UniRef:UniRef50_P00452,UniRef:UniRef90_P43754;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	1808555	1809685	.	+	.	ID=GCA000012185_01838_gene;locus_tag=GCA000012185_01838;gene=nrdB
contig_1	Pyrodigal	CDS	1808555	1809685	.	+	0	ID=GCA000012185_01838;Name=class Ia ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000012185_01838;product=class Ia ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0009263,GO:0016491,GO:0046872;gene=nrdB;Parent=GCA000012185_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_005650087.1,SO:0001217,UniParc:UPI000016860E,UniRef:UniRef100_P43755,UniRef:UniRef50_P69924,UniRef:UniRef90_P43755;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	1809801	1811030	.	-	.	ID=GCA000012185_01839_gene;locus_tag=GCA000012185_01839;gene=odhB
contig_1	Pyrodigal	CDS	1809801	1811030	.	-	0	ID=GCA000012185_01839;Name=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000012185_01839;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0005829,GO:0006099,GO:0033512,GO:0045252;gene=odhB;Parent=GCA000012185_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_011272725.1,SO:0001217,UniParc:UPI00003CD950,UniRef:UniRef100_Q4QJT2,UniRef:UniRef50_P0AFG6,UniRef:UniRef90_P45302;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	1811133	1813940	.	-	.	ID=GCA000012185_01840_gene;locus_tag=GCA000012185_01840;gene=sucA
contig_1	Pyrodigal	CDS	1811133	1813940	.	-	0	ID=GCA000012185_01840;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000012185_01840;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0005829,GO:0006096,GO:0006099,GO:0030976,GO:0045252;gene=sucA;Parent=GCA000012185_01840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_041174769.1,SO:0001217,UniParc:UPI000314C11B,UniRef:UniRef100_Q4QJT1,UniRef:UniRef50_P45303,UniRef:UniRef90_P45303;ec_number=1.2.4.2
contig_1	Pyrodigal	gene	1814143	1814781	.	-	.	ID=GCA000012185_01841_gene;locus_tag=GCA000012185_01841;gene=gloC
contig_1	Pyrodigal	CDS	1814143	1814781	.	-	0	ID=GCA000012185_01841;Name=Hydroxyacylglutathione hydrolase GloC;locus_tag=GCA000012185_01841;product=Hydroxyacylglutathione hydrolase GloC;Dbxref=GO:0004416,GO:0009636,GO:0046872;gene=gloC;Parent=GCA000012185_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_011272727.1,SO:0001217,UniParc:UPI000053E2EF,UniRef:UniRef100_Q4QJT0,UniRef:UniRef50_Q57544,UniRef:UniRef90_Q57544;ec_number=3.1.2.6
contig_1	Pyrodigal	gene	1814791	1815546	.	-	.	ID=GCA000012185_01842_gene;locus_tag=GCA000012185_01842;gene=tatD
contig_1	Pyrodigal	CDS	1814791	1815546	.	-	0	ID=GCA000012185_01842;Name=putative metal-dependent hydrolase HI_1664;locus_tag=GCA000012185_01842;product=putative metal-dependent hydrolase HI_1664;Dbxref=GO:0016788,GO:0046872;gene=tatD;Parent=GCA000012185_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_011272728.1,SO:0001217,UniParc:UPI000053E2F0,UniRef:UniRef100_Q4QJS9,UniRef:UniRef50_P45305,UniRef:UniRef90_P45305;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1815598	1816158	.	-	.	ID=GCA000012185_01843_gene;locus_tag=GCA000012185_01843;gene=ycbK
contig_1	Pyrodigal	CDS	1815598	1816158	.	-	0	ID=GCA000012185_01843;Name=DUF882 domain-containing protein;locus_tag=GCA000012185_01843;product=DUF882 domain-containing protein;gene=ycbK;Parent=GCA000012185_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3108,COG:S,RefSeq:WP_011272729.1,SO:0001217,UniParc:UPI000053E2F1,UniRef:UniRef100_Q4QJS8,UniRef:UniRef50_E8KJ35,UniRef:UniRef90_Q4QJS8
contig_1	Pyrodigal	gene	1816174	1817643	.	-	.	ID=GCA000012185_01844_gene;locus_tag=GCA000012185_01844;gene=ycbB
contig_1	Pyrodigal	CDS	1816174	1817643	.	-	0	ID=GCA000012185_01844;Name=Putative L%2CD-transpeptidase HI_1667;locus_tag=GCA000012185_01844;product=Putative L%2CD-transpeptidase HI_1667;Dbxref=GO:0004180,GO:0008360,GO:0009252,GO:0016020,GO:0016757,GO:0071555;gene=ycbB;Parent=GCA000012185_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2989,COG:M,RefSeq:WP_011272730.1,SO:0001217,UniParc:UPI000039ACBE,UniRef:UniRef100_A5UFA7,UniRef:UniRef50_P44285,UniRef:UniRef90_P44285;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	1817717	1819798	.	-	.	ID=GCA000012185_01845_gene;locus_tag=GCA000012185_01845;gene=prc
contig_1	Pyrodigal	CDS	1817717	1819798	.	-	0	ID=GCA000012185_01845;Name=carboxy terminal-processing peptidase;locus_tag=GCA000012185_01845;product=carboxy terminal-processing peptidase;Dbxref=GO:0004175,GO:0004252,GO:0005515,GO:0005886,GO:0006508,GO:0007165,GO:0008236,GO:0030288;gene=prc;Parent=GCA000012185_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_041174770.1,SO:0001217,UniParc:UPI0002E62494,UniRef:UniRef100_Q4QJS6,UniRef:UniRef50_P45306,UniRef:UniRef90_P45306;ec_number=3.4.21.102
contig_1	Pyrodigal	gene	1819826	1820464	.	-	.	ID=GCA000012185_01846_gene;locus_tag=GCA000012185_01846;gene=proQ
contig_1	Pyrodigal	CDS	1819826	1820464	.	-	0	ID=GCA000012185_01846;Name=RNA chaperone ProQ;locus_tag=GCA000012185_01846;product=RNA chaperone ProQ;Dbxref=GO:0003723,GO:0005829,GO:0010608,GO:0033592,GO:0034057;gene=proQ;Parent=GCA000012185_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3109,COG:T,KEGG:K03607,RefSeq:WP_005657682.1,SO:0001217,UniParc:UPI000053E2F3,UniRef:UniRef100_A0A0H3PH30,UniRef:UniRef50_P44286,UniRef:UniRef90_P44286
contig_1	Pyrodigal	gene	1820585	1820716	.	-	.	ID=GCA000012185_01847_gene;locus_tag=GCA000012185_01847
contig_1	Pyrodigal	CDS	1820585	1820716	.	-	0	ID=GCA000012185_01847;Name=Paraquat-inducible protein A%2C partial;locus_tag=GCA000012185_01847;product=Paraquat-inducible protein A%2C partial;Parent=GCA000012185_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00014F7E9C,UniRef:UniRef100_A0A0Y7IP56,UniRef:UniRef50_A5UFB0,UniRef:UniRef90_A5UFB0
contig_1	Pyrodigal	gene	1820817	1821899	.	+	.	ID=GCA000012185_01848_gene;locus_tag=GCA000012185_01848;gene=pqiA
contig_1	Pyrodigal	CDS	1820817	1821899	.	+	0	ID=GCA000012185_01848;Name=putative protein HI_1671;locus_tag=GCA000012185_01848;product=putative protein HI_1671;Dbxref=GO:0005886;gene=pqiA;Parent=GCA000012185_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2995,COG:M,KEGG:K03808,SO:0001217,UniRef:UniRef50_P44287,UniRef:UniRef90_P44287
contig_1	Pyrodigal	gene	1821883	1824528	.	+	.	ID=GCA000012185_01849_gene;locus_tag=GCA000012185_01849;gene=pqiB
contig_1	Pyrodigal	CDS	1821883	1824528	.	+	0	ID=GCA000012185_01849;Name=putative protein HI_1672;locus_tag=GCA000012185_01849;product=putative protein HI_1672;Dbxref=GO:0016020;gene=pqiB;Parent=GCA000012185_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3008,COG:M,KEGG:K06192,RefSeq:WP_011272733.1,SO:0001217,UniParc:UPI000053E2F5,UniRef:UniRef100_Q4QJS3,UniRef:UniRef50_P44288,UniRef:UniRef90_P44288
contig_1	Pyrodigal	gene	1824583	1825035	.	-	.	ID=GCA000012185_01850_gene;locus_tag=GCA000012185_01850;gene=moaE
contig_1	Pyrodigal	CDS	1824583	1825035	.	-	0	ID=GCA000012185_01850;Name=molybdopterin synthase catalytic subunit MoaE;locus_tag=GCA000012185_01850;product=molybdopterin synthase catalytic subunit MoaE;Dbxref=GO:0005829,GO:0006777,GO:0030366;gene=moaE;Parent=GCA000012185_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,KEGG:K03635,RefSeq:WP_011272734.1,SO:0001217,UniParc:UPI000053E2F6,UniRef:UniRef100_A0AAJ8WRN6,UniRef:UniRef50_P45308,UniRef:UniRef90_P45308;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	1825036	1825281	.	-	.	ID=GCA000012185_01851_gene;locus_tag=GCA000012185_01851;gene=moaD
contig_1	Pyrodigal	CDS	1825036	1825281	.	-	0	ID=GCA000012185_01851;Name=molybdopterin synthase sulfur carrier subunit;locus_tag=GCA000012185_01851;product=molybdopterin synthase sulfur carrier subunit;Dbxref=GO:0000166,GO:0006777,GO:1990133;gene=moaD;Parent=GCA000012185_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_011272735.1,SO:0001217,UniParc:UPI000053E2F7,UniRef:UniRef100_A0AAJ8WRN4,UniRef:UniRef50_P45309,UniRef:UniRef90_P45309;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	1825283	1825765	.	-	.	ID=GCA000012185_01852_gene;locus_tag=GCA000012185_01852;gene=moaC
contig_1	Pyrodigal	CDS	1825283	1825765	.	-	0	ID=GCA000012185_01852;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000012185_01852;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000012185_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,RefSeq:WP_011272736.1,SO:0001217,UniParc:UPI000053E2F8,UniRef:UniRef100_Q4QJS0,UniRef:UniRef50_P0A738,UniRef:UniRef90_P45310;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	1825857	1826870	.	-	.	ID=GCA000012185_01853_gene;locus_tag=GCA000012185_01853;gene=moaA
contig_1	Pyrodigal	CDS	1825857	1826870	.	-	0	ID=GCA000012185_01853;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000012185_01853;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000012185_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2896,COG:H,RefSeq:WP_011272737.1,SO:0001217,UniParc:UPI000053E2F9,UniRef:UniRef100_Q4QJR9,UniRef:UniRef50_Q8ZGW5,UniRef:UniRef90_P45311;ec_number=4.1.99.22
contig_1	Infernal	regulatory_region	1826859	1827000	1.3e-15	-	.	ID=JPLKGDNPJF_101;Name=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);product=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);Dbxref=RFAM:RF01055;inference=profile:Rfam:RF01055;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1827315	1827788	.	+	.	ID=GCA000012185_01854_gene;locus_tag=GCA000012185_01854
contig_1	Pyrodigal	CDS	1827315	1827788	.	+	0	ID=GCA000012185_01854;Name=putative regulator of cell morphogenesis and NO signaling;locus_tag=GCA000012185_01854;product=putative regulator of cell morphogenesis and NO signaling;Parent=GCA000012185_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CD998,UniRef:UniRef100_Q4QJR8,UniRef:UniRef50_Q4QJR8,UniRef:UniRef90_Q4QJR8
contig_1	Pyrodigal	gene	1827764	1827985	.	+	.	ID=GCA000012185_01855_gene;locus_tag=GCA000012185_01855
contig_1	Pyrodigal	CDS	1827764	1827985	.	+	0	ID=GCA000012185_01855;Name=hemerythrin domain-containing protein;locus_tag=GCA000012185_01855;product=hemerythrin domain-containing protein;Parent=GCA000012185_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI003296B202
contig_1	Infernal	gene	1828062	1828438	.	-	.	ID=GCA000012185_01856_gene;locus_tag=GCA000012185_01856;gene=RNaseP_bact_a
contig_1	Infernal	ncRNA	1828062	1828438	3.3e-42	-	.	ID=GCA000012185_01856;Name=Bacterial RNase P class A;locus_tag=GCA000012185_01856;product=Bacterial RNase P class A;Dbxref=RFAM:RF00010;Parent=GCA000012185_01856_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00010
contig_1	Pyrodigal	gene	1828600	1829535	.	+	.	ID=GCA000012185_01857_gene;locus_tag=GCA000012185_01857;gene=kpsF
contig_1	Pyrodigal	CDS	1828600	1829535	.	+	0	ID=GCA000012185_01857;Name=KpsF/GutQ family sugar isomerase;locus_tag=GCA000012185_01857;product=KpsF/GutQ family sugar isomerase;Dbxref=GO:0005975,GO:0019146,GO:0046872,GO:0097367,GO:1901135;gene=kpsF;Parent=GCA000012185_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,RefSeq:WP_041174771.1,SO:0001217,UniParc:UPI00003CD99A,UniRef:UniRef100_Q4QJR6,UniRef:UniRef50_P45313,UniRef:UniRef90_P45313,VFDB:VFC0258,VFDB:VFG013476;ec_number=5.3.1.13
contig_1	Pyrodigal	gene	1829545	1830087	.	+	.	ID=GCA000012185_01858_gene;locus_tag=GCA000012185_01858;gene=kdsC
contig_1	Pyrodigal	CDS	1829545	1830087	.	+	0	ID=GCA000012185_01858;Name=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;locus_tag=GCA000012185_01858;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;Dbxref=GO:0009103,GO:0019143,GO:0046872;gene=kdsC;Parent=GCA000012185_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1778,COG:MR,RefSeq:WP_011272741.1,SO:0001217,UniParc:UPI00003CD99B,UniRef:UniRef100_Q4QJR5,UniRef:UniRef50_P45314,UniRef:UniRef90_P45314;ec_number=3.1.3.45
contig_1	Pyrodigal	gene	1830518	1834996	.	+	.	ID=GCA000012185_01859_gene;locus_tag=GCA000012185_01859;gene=hmwA
contig_1	Pyrodigal	CDS	1830518	1834996	.	+	0	ID=GCA000012185_01859;Name=HmwA;locus_tag=GCA000012185_01859;product=HmwA;gene=hmwA;Parent=GCA000012185_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272742.1,SO:0001217,UniParc:UPI000053E2FB,UniRef:UniRef100_Q4QJR4,UniRef:UniRef50_Q70EM3,UniRef:UniRef90_Q9RNI2
contig_1	Pyrodigal	gene	1835147	1836784	.	+	.	ID=GCA000012185_01860_gene;locus_tag=GCA000012185_01860;gene=hmw1B
contig_1	Pyrodigal	CDS	1835147	1836784	.	+	0	ID=GCA000012185_01860;Name=two-partner secretion (TPS) system translocator Hmw1B;locus_tag=GCA000012185_01860;product=two-partner secretion (TPS) system translocator Hmw1B;gene=hmw1B;Parent=GCA000012185_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_014550670,BlastRules:WP_014550854,COG:COG2831,COG:U,RefSeq:WP_011272743.1,SO:0001217,UniParc:UPI000053E2FC,UniRef:UniRef100_Q4QJR3,UniRef:UniRef50_Q4QJR3,UniRef:UniRef90_Q4QJR3
contig_1	Pyrodigal	gene	1836978	1838930	.	+	.	ID=GCA000012185_01861_gene;locus_tag=GCA000012185_01861;gene=hmw1C
contig_1	Pyrodigal	CDS	1836978	1838930	.	+	0	ID=GCA000012185_01861;Name=glycosyltransferase;locus_tag=GCA000012185_01861;product=glycosyltransferase;gene=hmw1C;Parent=GCA000012185_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3914,COG:O,RefSeq:WP_011272744.1,SO:0001217,UniParc:UPI000053E2FD,UniRef:UniRef100_Q4QJR2,UniRef:UniRef50_B3H2N2,UniRef:UniRef90_Q48033,VFDB:VFC0001,VFDB:VFG001153
contig_1	Pyrodigal	gene	1839007	1841163	.	-	.	ID=GCA000012185_01862_gene;locus_tag=GCA000012185_01862;gene=yccC
contig_1	Pyrodigal	CDS	1839007	1841163	.	-	0	ID=GCA000012185_01862;Name=putative protein HI_1680;locus_tag=GCA000012185_01862;product=putative protein HI_1680;Dbxref=GO:0005886;gene=yccC;Parent=GCA000012185_01862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_011272745.1,SO:0001217,UniParc:UPI000053E2FE,UniRef:UniRef100_Q4QJR1,UniRef:UniRef50_P44289,UniRef:UniRef90_P44289
contig_1	Pyrodigal	gene	1841231	1841896	.	-	.	ID=GCA000012185_01863_gene;locus_tag=GCA000012185_01863;gene=yccT
contig_1	Pyrodigal	CDS	1841231	1841896	.	-	0	ID=GCA000012185_01863;Name=curli polymerization inhibitor CsgI-related protein;locus_tag=GCA000012185_01863;product=curli polymerization inhibitor CsgI-related protein;gene=yccT;Parent=GCA000012185_01863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3110,COG:S,KEGG:K09909,RefSeq:WP_011272746.1,SO:0001217,UniParc:UPI000053E2FF,UniRef:UniRef100_Q4QJR0,UniRef:UniRef50_P44290,UniRef:UniRef90_P44290
contig_1	Pyrodigal	gene	1842094	1843155	.	+	.	ID=GCA000012185_01864_gene;locus_tag=GCA000012185_01864;gene=sohB
contig_1	Pyrodigal	CDS	1842094	1843155	.	+	0	ID=GCA000012185_01864;Name=protease SohB;locus_tag=GCA000012185_01864;product=protease SohB;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0008233;gene=sohB;Parent=GCA000012185_01864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04774,RefSeq:WP_005689720.1,SO:0001217,UniParc:UPI000039A84A,UniRef:UniRef100_A0A0Y7MYC3,UniRef:UniRef50_P45315,UniRef:UniRef90_P45315;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1843439	1844017	.	+	.	ID=GCA000012185_01865_gene;locus_tag=GCA000012185_01865;gene=rsxA
contig_1	Pyrodigal	CDS	1843439	1844017	.	+	0	ID=GCA000012185_01865;Name=electron transport complex subunit RsxA;locus_tag=GCA000012185_01865;product=electron transport complex subunit RsxA;Dbxref=GO:0005886,GO:0016020,GO:0022900;gene=rsxA;Parent=GCA000012185_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4657,KEGG:K03617,RefSeq:WP_005654147.1,SO:0001217,UniParc:UPI000039A84B,UniRef:UniRef100_Q4QJQ8,UniRef:UniRef50_P0A766,UniRef:UniRef90_P71395;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1844105	1844686	.	+	.	ID=GCA000012185_01866_gene;locus_tag=GCA000012185_01866;gene=rsxB
contig_1	Pyrodigal	CDS	1844105	1844686	.	+	0	ID=GCA000012185_01866;Name=electron transport complex subunit RsxB;locus_tag=GCA000012185_01866;product=electron transport complex subunit RsxB;Dbxref=GO:0005886,GO:0009055,GO:0022900,GO:0046872,GO:0051536,GO:0051539;gene=rsxB;Parent=GCA000012185_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2878,RefSeq:WP_005650033.1,SO:0001217,UniParc:UPI0000134386,UniRef:UniRef100_P71396,UniRef:UniRef50_P71396,UniRef:UniRef90_P71396;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1844687	1846684	.	+	.	ID=GCA000012185_01867_gene;locus_tag=GCA000012185_01867;gene=rsxC
contig_1	Pyrodigal	CDS	1844687	1846684	.	+	0	ID=GCA000012185_01867;Name=electron transport complex subunit RsxC;locus_tag=GCA000012185_01867;product=electron transport complex subunit RsxC;Dbxref=GO:0005886,GO:0009055,GO:0016020,GO:0022900,GO:0046872,GO:0051539;gene=rsxC;Parent=GCA000012185_01867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272747.1,SO:0001217,UniParc:UPI000053E300,UniRef:UniRef100_Q4QJQ6,UniRef:UniRef50_Q9CNP2,UniRef:UniRef90_Q4QJQ6;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1846814	1847890	.	+	.	ID=GCA000012185_01868_gene;locus_tag=GCA000012185_01868;gene=rsxD
contig_1	Pyrodigal	CDS	1846814	1847890	.	+	0	ID=GCA000012185_01868;Name=electron transport complex subunit RsxD;locus_tag=GCA000012185_01868;product=electron transport complex subunit RsxD;Dbxref=GO:0005886,GO:0016020,GO:0022900,GO:0055085;gene=rsxD;Parent=GCA000012185_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272748.1,SO:0001217,UniParc:UPI000053E301,UniRef:UniRef100_Q4QJQ5,UniRef:UniRef50_Q57288,UniRef:UniRef90_Q57288;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1847890	1848513	.	+	.	ID=GCA000012185_01869_gene;locus_tag=GCA000012185_01869;gene=rsxG
contig_1	Pyrodigal	CDS	1847890	1848513	.	+	0	ID=GCA000012185_01869;Name=electron transport complex subunit RsxG;locus_tag=GCA000012185_01869;product=electron transport complex subunit RsxG;Dbxref=GO:0005886,GO:0009055,GO:0010181,GO:0016020,GO:0022900;gene=rsxG;Parent=GCA000012185_01869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4659,RefSeq:WP_005658206.1,SO:0001217,UniParc:UPI000053E302,UniRef:UniRef100_Q4QJQ4,UniRef:UniRef50_P44291,UniRef:UniRef90_P44291;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1848515	1849222	.	+	.	ID=GCA000012185_01870_gene;locus_tag=GCA000012185_01870;gene=rnfE
contig_1	Pyrodigal	CDS	1848515	1849222	.	+	0	ID=GCA000012185_01870;Name=Ion-translocating oxidoreductase complex subunit E;locus_tag=GCA000012185_01870;product=Ion-translocating oxidoreductase complex subunit E;Dbxref=GO:0005886,GO:0022900;gene=rnfE;Parent=GCA000012185_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4660,RefSeq:WP_011272749.1,SO:0001217,UniParc:UPI000053E303,UniRef:UniRef100_Q4QJQ3,UniRef:UniRef50_A5F2S7,UniRef:UniRef90_Q57020;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1849344	1849979	.	+	.	ID=GCA000012185_01871_gene;locus_tag=GCA000012185_01871;gene=nth
contig_1	Pyrodigal	CDS	1849344	1849979	.	+	0	ID=GCA000012185_01871;Name=endonuclease III;locus_tag=GCA000012185_01871;product=endonuclease III;Dbxref=GO:0003677,GO:0003906,GO:0006284,GO:0006285,GO:0019104,GO:0046872,GO:0051539,GO:0140078;gene=nth;Parent=GCA000012185_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_011272750.1,SO:0001217,UniParc:UPI000045E9EE,UniRef:UniRef100_A0A2S9S5R5,UniRef:UniRef50_P44319,UniRef:UniRef90_P44319;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1850038	1851411	.	+	.	ID=GCA000012185_01872_gene;locus_tag=GCA000012185_01872;gene=yocR
contig_1	Pyrodigal	CDS	1850038	1851411	.	+	0	ID=GCA000012185_01872;Name=putative sodium-dependent transporter HI_1690;locus_tag=GCA000012185_01872;product=putative sodium-dependent transporter HI_1690;Dbxref=GO:0005886,GO:0015293;gene=yocR;Parent=GCA000012185_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_005654380.1,SO:0001217,UniParc:UPI000039A851,UniRef:UniRef100_A0A2S9S5R0,UniRef:UniRef50_P45320,UniRef:UniRef90_P45320
contig_1	Pyrodigal	gene	1851435	1852490	.	-	.	ID=GCA000012185_01873_gene;locus_tag=GCA000012185_01873;gene=modC
contig_1	Pyrodigal	CDS	1851435	1852490	.	-	0	ID=GCA000012185_01873;Name=molybdenum ABC transporter ATP-binding protein ModC;locus_tag=GCA000012185_01873;product=molybdenum ABC transporter ATP-binding protein ModC;Dbxref=GO:0005524,GO:0005886,GO:0015098,GO:0015412,GO:0015689,GO:0016020,GO:0016887;gene=modC;Parent=GCA000012185_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_005689729.1,SO:0001217,UniParc:UPI000045E9EF,UniRef:UniRef100_Q4QJQ0,UniRef:UniRef50_P09833,UniRef:UniRef90_P45321;ec_number=7.3.2.5
contig_1	Pyrodigal	gene	1852477	1853166	.	-	.	ID=GCA000012185_01874_gene;locus_tag=GCA000012185_01874;gene=modB
contig_1	Pyrodigal	CDS	1852477	1853166	.	-	0	ID=GCA000012185_01874;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000012185_01874;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015098,GO:0015689,GO:0016020;gene=modB;Parent=GCA000012185_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_011272751.1,SO:0001217,UniParc:UPI00003CDB47,UniRef:UniRef100_A0A0H3PBH9,UniRef:UniRef50_P45322,UniRef:UniRef90_P45322;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	1853340	1854104	.	-	.	ID=GCA000012185_01875_gene;locus_tag=GCA000012185_01875;gene=modA
contig_1	Pyrodigal	CDS	1853340	1854104	.	-	0	ID=GCA000012185_01875;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000012185_01875;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015689,GO:0030288,GO:0030973,GO:0046872;gene=modA;Parent=GCA000012185_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_005654371.1,SO:0001217,UniParc:UPI000039A94B,UniRef:UniRef100_A0A0H3PFX3,UniRef:UniRef50_P45323,UniRef:UniRef90_P45323;ec_number=7.3.2.-
contig_1	Pyrodigal	gene	1854242	1855009	.	+	.	ID=GCA000012185_01876_gene;locus_tag=GCA000012185_01876;gene=modE
contig_1	Pyrodigal	CDS	1854242	1855009	.	+	0	ID=GCA000012185_01876;Name=Transcriptional regulator ModE;locus_tag=GCA000012185_01876;product=Transcriptional regulator ModE;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0015689,GO:0030151;gene=modE;Parent=GCA000012185_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2005,COG:K,KEGG:K02019,RefSeq:WP_005658217.1,SO:0001217,UniParc:UPI00003CDCC4,UniRef:UniRef100_A0A0H3PCA7,UniRef:UniRef50_P45324,UniRef:UniRef90_P45324
contig_1	Pyrodigal	gene	1855119	1855922	.	-	.	ID=GCA000012185_01877_gene;locus_tag=GCA000012185_01877;gene=lsgF
contig_1	Pyrodigal	CDS	1855119	1855922	.	-	0	ID=GCA000012185_01877;Name=glycosyltransferase;locus_tag=GCA000012185_01877;product=glycosyltransferase;Dbxref=GO:0016757;gene=lsgF;Parent=GCA000012185_01877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_011272752.1,SO:0001217,UniParc:UPI000053E304,UniRef:UniRef100_Q4QJP6,UniRef:UniRef50_Q48215,UniRef:UniRef90_Q48215,VFDB:VFC0258,VFDB:VFG013482;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1855924	1856808	.	-	.	ID=GCA000012185_01878_gene;locus_tag=GCA000012185_01878;gene=lsgE
contig_1	Pyrodigal	CDS	1855924	1856808	.	-	0	ID=GCA000012185_01878;Name=lipooligosaccharide biosynthesis N-acetyl-glucosamine transferase LsgE;locus_tag=GCA000012185_01878;product=lipooligosaccharide biosynthesis N-acetyl-glucosamine transferase LsgE;Dbxref=GO:0016757;gene=lsgE;Parent=GCA000012185_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694185,COG:COG0463,COG:M,RefSeq:WP_011272753.1,SO:0001217,UniParc:UPI000053E305,UniRef:UniRef100_Q4QJP5,UniRef:UniRef50_Q48214,UniRef:UniRef90_Q48214;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1856820	1857593	.	-	.	ID=GCA000012185_01879_gene;locus_tag=GCA000012185_01879;gene=lsgD
contig_1	Pyrodigal	CDS	1856820	1857593	.	-	0	ID=GCA000012185_01879;Name=lipooligosaccharide biosynthesis galactosyltransferase LsgD;locus_tag=GCA000012185_01879;product=lipooligosaccharide biosynthesis galactosyltransferase LsgD;Dbxref=GO:0009103,GO:0016757;gene=lsgD;Parent=GCA000012185_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694186,RefSeq:WP_005688021.1,SO:0001217,UniParc:UPI000053E306,UniRef:UniRef100_Q4QJP4,UniRef:UniRef50_P71398,UniRef:UniRef90_P71398;ec_number=2.-.-.-
contig_1	Pyrodigal	gene	1857605	1858666	.	-	.	ID=GCA000012185_01880_gene;locus_tag=GCA000012185_01880;gene=lsgC
contig_1	Pyrodigal	CDS	1857605	1858666	.	-	0	ID=GCA000012185_01880;Name=lipooligosaccharide biosynthesis family 4 glycosyltransferase LsgC;locus_tag=GCA000012185_01880;product=lipooligosaccharide biosynthesis family 4 glycosyltransferase LsgC;Dbxref=GO:0016020,GO:0016757;gene=lsgC;Parent=GCA000012185_01880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694187,COG:COG0438,COG:M,RefSeq:WP_011272754.1,SO:0001217,UniParc:UPI000053E307,UniRef:UniRef100_Q4QJP3,UniRef:UniRef50_O05083,UniRef:UniRef90_O05083;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1858668	1859582	.	-	.	ID=GCA000012185_01881_gene;locus_tag=GCA000012185_01881;gene=lsgB
contig_1	Pyrodigal	CDS	1858668	1859582	.	-	0	ID=GCA000012185_01881;Name=lipooligosaccharide biosynthesis sialyltransferase LsgB;locus_tag=GCA000012185_01881;product=lipooligosaccharide biosynthesis sialyltransferase LsgB;Dbxref=GO:0008118,GO:0009103;gene=lsgB;Parent=GCA000012185_01881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010869274,KEGG:K00785,RefSeq:WP_011272755.1,SO:0001217,UniParc:UPI00003CDA82,UniRef:UniRef100_Q4QJP2,UniRef:UniRef50_Q48211,UniRef:UniRef90_Q48211;ec_number=2.4.99.6
contig_1	Pyrodigal	gene	1859579	1860784	.	-	.	ID=GCA000012185_01882_gene;locus_tag=GCA000012185_01882;gene=lsgA
contig_1	Pyrodigal	CDS	1859579	1860784	.	-	0	ID=GCA000012185_01882;Name=lipooligosaccharide flippase LsgA;locus_tag=GCA000012185_01882;product=lipooligosaccharide flippase LsgA;Dbxref=GO:0005886;gene=lsgA;Parent=GCA000012185_01882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694190,COG:COG2244,COG:M,RefSeq:WP_011272756.1,SO:0001217,UniParc:UPI000053E308,UniRef:UniRef100_Q4QJP1,UniRef:UniRef50_P71399,UniRef:UniRef90_P71399
contig_1	Pyrodigal	gene	1860919	1861662	.	+	.	ID=GCA000012185_01883_gene;locus_tag=GCA000012185_01883;gene=elyC
contig_1	Pyrodigal	CDS	1860919	1861662	.	+	0	ID=GCA000012185_01883;Name=putative protein HI_1701;locus_tag=GCA000012185_01883;product=putative protein HI_1701;Dbxref=GO:0000270,GO:0005886,GO:0043164;gene=elyC;Parent=GCA000012185_01883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_005658239.1,SO:0001217,UniParc:UPI00003CD8F2,UniRef:UniRef100_A0A0H3PBI7,UniRef:UniRef50_P44292,UniRef:UniRef90_P44292
contig_1	Pyrodigal	gene	1861885	1863978	.	-	.	ID=GCA000012185_01884_gene;locus_tag=GCA000012185_01884;gene=metE
contig_1	Pyrodigal	CDS	1861885	1863978	.	-	0	ID=GCA000012185_01884;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000012185_01884;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0008652,GO:0009086,GO:0032259;gene=metE;Parent=GCA000012185_01884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,SO:0001217,UniRef:UniRef50_P45331,UniRef:UniRef90_P45331;ec_number=2.1.1.14
contig_1	Pyrodigal	gene	1863945	1864154	.	-	.	ID=GCA000012185_01885_gene;locus_tag=GCA000012185_01885
contig_1	Pyrodigal	CDS	1863945	1864154	.	-	0	ID=GCA000012185_01885;Name=hypothetical protein;locus_tag=GCA000012185_01885;product=hypothetical protein;Parent=GCA000012185_01885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF08267.18
contig_1	Pyrodigal	gene	1864348	1865424	.	-	.	ID=GCA000012185_01886_gene;locus_tag=GCA000012185_01886;gene=lptG
contig_1	Pyrodigal	CDS	1864348	1865424	.	-	0	ID=GCA000012185_01886;Name=LPS export ABC transporter permease LptG;locus_tag=GCA000012185_01886;product=LPS export ABC transporter permease LptG;Dbxref=GO:0015221,GO:0015920,GO:0043190,GO:0055085;gene=lptG;Parent=GCA000012185_01886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,RefSeq:WP_005658244.1,SO:0001217,UniParc:UPI00003CD8F5,UniRef:UniRef100_A0A0H3PCB6,UniRef:UniRef50_P0ADC6,UniRef:UniRef90_P45332;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	1865421	1866524	.	-	.	ID=GCA000012185_01887_gene;locus_tag=GCA000012185_01887;gene=lptF
contig_1	Pyrodigal	CDS	1865421	1866524	.	-	0	ID=GCA000012185_01887;Name=LPS export ABC transporter permease LptF;locus_tag=GCA000012185_01887;product=LPS export ABC transporter permease LptF;Dbxref=GO:0015221,GO:0015920,GO:0043190,GO:0055085;gene=lptF;Parent=GCA000012185_01887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,KEGG:K07091,RefSeq:WP_005658246.1,SO:0001217,UniParc:UPI000039ACE0,UniRef:UniRef100_P45333,UniRef:UniRef50_P45333,UniRef:UniRef90_P45333;ec_number=7.5.2.5
contig_1	Pyrodigal	gene	1866632	1868107	.	+	.	ID=GCA000012185_01888_gene;locus_tag=GCA000012185_01888;gene=pepA
contig_1	Pyrodigal	CDS	1866632	1868107	.	+	0	ID=GCA000012185_01888;Name=leucyl aminopeptidase;locus_tag=GCA000012185_01888;product=leucyl aminopeptidase;Dbxref=GO:0004177,GO:0005737,GO:0006508,GO:0019538,GO:0030145,GO:0070006;gene=pepA;Parent=GCA000012185_01888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005658248.1,SO:0001217,UniParc:UPI000039A860,UniRef:UniRef100_Q4QJN7,UniRef:UniRef50_P68767,UniRef:UniRef90_P45334;ec_number=3.4.11.1
contig_1	Pyrodigal	gene	1868143	1870080	.	-	.	ID=GCA000012185_01889_gene;locus_tag=GCA000012185_01889;gene=betT
contig_1	Pyrodigal	CDS	1868143	1870080	.	-	0	ID=GCA000012185_01889;Name=putative transporter HI_1706;locus_tag=GCA000012185_01889;product=putative transporter HI_1706;Dbxref=GO:0005886,GO:0022857;gene=betT;Parent=GCA000012185_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,KEGG:K02168,SO:0001217,UniParc:UPI0005BECFD6,UniRef:UniRef100_A0A0H3PBJ0,UniRef:UniRef50_P45335,UniRef:UniRef90_P45335
contig_1	Pyrodigal	gene	1870447	1871802	.	-	.	ID=GCA000012185_01890_gene;locus_tag=GCA000012185_01890;gene=qseC
contig_1	Pyrodigal	CDS	1870447	1871802	.	-	0	ID=GCA000012185_01890;Name=quorum sensing histidine kinase QseC;locus_tag=GCA000012185_01890;product=quorum sensing histidine kinase QseC;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0007165;gene=qseC;Parent=GCA000012185_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,RefSeq:WP_005658253.1,SO:0001217,UniParc:UPI000053E30A,UniRef:UniRef100_A0A0H3PFY5,UniRef:UniRef50_P45336,UniRef:UniRef90_P45336;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1871799	1872464	.	-	.	ID=GCA000012185_01891_gene;locus_tag=GCA000012185_01891;gene=qseB
contig_1	Pyrodigal	CDS	1871799	1872464	.	-	0	ID=GCA000012185_01891;Name=Transcriptional regulatory protein QseB;locus_tag=GCA000012185_01891;product=Transcriptional regulatory protein QseB;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=qseB;Parent=GCA000012185_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_011272758.1,SO:0001217,UniParc:UPI00003CDB02,UniRef:UniRef100_Q4QJN4,UniRef:UniRef50_P45337,UniRef:UniRef90_P45337
contig_1	Pyrodigal	gene	1872528	1872893	.	-	.	ID=GCA000012185_01892_gene;locus_tag=GCA000012185_01892;gene=ydeI
contig_1	Pyrodigal	CDS	1872528	1872893	.	-	0	ID=GCA000012185_01892;Name=putative protein HI_1709;locus_tag=GCA000012185_01892;product=putative protein HI_1709;Dbxref=GO:0042597;gene=ydeI;Parent=GCA000012185_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3111,COG:S,RefSeq:WP_005688032.1,SO:0001217,UniParc:UPI000039A864,UniRef:UniRef100_A0A0C5FNJ0,UniRef:UniRef50_P44293,UniRef:UniRef90_P44293
contig_1	Pyrodigal	gene	1873008	1873637	.	-	.	ID=GCA000012185_01893_gene;locus_tag=GCA000012185_01893
contig_1	Pyrodigal	CDS	1873008	1873637	.	-	0	ID=GCA000012185_01893;Name=Phosphohexomutase;locus_tag=GCA000012185_01893;product=Phosphohexomutase;Parent=GCA000012185_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CDB00,UniRef:UniRef100_A0AAJ8WC91,UniRef:UniRef50_A0AAJ8WC91,UniRef:UniRef90_A0AAJ8WC91
contig_1	Pyrodigal	gene	1873675	1874028	.	-	.	ID=GCA000012185_01894_gene;locus_tag=GCA000012185_01894
contig_1	Pyrodigal	CDS	1873675	1874028	.	-	0	ID=GCA000012185_01894;Name=Mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000012185_01894;product=Mannose-6-phosphate isomerase%2C class I;Parent=GCA000012185_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031DA402,UniRef:UniRef100_A0AAJ8WC67,UniRef:UniRef50_A0AAJ8WC67,UniRef:UniRef90_A0AAJ8WC67
contig_1	Pyrodigal	gene	1874398	1874898	.	-	.	ID=GCA000012185_01895_gene;locus_tag=GCA000012185_01895;gene=crr
contig_1	Pyrodigal	CDS	1874398	1874898	.	-	0	ID=GCA000012185_01895;Name=PTS glucose transporter subunit IIA;locus_tag=GCA000012185_01895;product=PTS glucose transporter subunit IIA;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0046872;gene=crr;Parent=GCA000012185_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_011272759.1,SO:0001217,UniParc:UPI000053E30B,UniRef:UniRef100_A0AAJ8WC63,UniRef:UniRef50_P45338,UniRef:UniRef90_P45338;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	1874958	1876685	.	-	.	ID=GCA000012185_01896_gene;locus_tag=GCA000012185_01896;gene=ptsI
contig_1	Pyrodigal	CDS	1874958	1876685	.	-	0	ID=GCA000012185_01896;Name=phosphoenolpyruvate-protein phosphotransferase PtsI;locus_tag=GCA000012185_01896;product=phosphoenolpyruvate-protein phosphotransferase PtsI;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872;gene=ptsI;Parent=GCA000012185_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_011272760.1,SO:0001217,UniParc:UPI00003CD902,UniRef:UniRef100_A0A0Y7LY25,UniRef:UniRef50_P08839,UniRef:UniRef90_P43922;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	1876765	1877022	.	-	.	ID=GCA000012185_01897_gene;locus_tag=GCA000012185_01897
contig_1	Pyrodigal	CDS	1876765	1877022	.	-	0	ID=GCA000012185_01897;Name=Phosphocarrier protein HPr;locus_tag=GCA000012185_01897;product=Phosphocarrier protein HPr;Parent=GCA000012185_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272761.1,SO:0001217,UniParc:UPI00003CD903,UniRef:UniRef100_A0A2S9S5T0,UniRef:UniRef90_P43921
contig_1	Pyrodigal	gene	1877181	1878221	.	-	.	ID=GCA000012185_01898_gene;locus_tag=GCA000012185_01898;gene=rsgA
contig_1	Pyrodigal	CDS	1877181	1878221	.	-	0	ID=GCA000012185_01898;Name=small ribosomal subunit biogenesis GTPase RsgA;locus_tag=GCA000012185_01898;product=small ribosomal subunit biogenesis GTPase RsgA;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0019843,GO:0042274,GO:0046872;gene=rsgA;Parent=GCA000012185_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,KEGG:K06949,RefSeq:WP_011272762.1,SO:0001217,UniParc:UPI00003CD904,UniRef:UniRef100_Q4QJM9,UniRef:UniRef50_P39286,UniRef:UniRef90_P45339;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1878292	1878840	.	+	.	ID=GCA000012185_01899_gene;locus_tag=GCA000012185_01899;gene=orn
contig_1	Pyrodigal	CDS	1878292	1878840	.	+	0	ID=GCA000012185_01899;Name=oligoribonuclease;locus_tag=GCA000012185_01899;product=oligoribonuclease;Dbxref=GO:0000175,GO:0003676,GO:0005737,GO:0006259;gene=orn;Parent=GCA000012185_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:A,COG:COG1949,KEGG:K13288,RefSeq:WP_009500975.1,SO:0001217,UniParc:UPI00003CD905,UniRef:UniRef100_Q4QJM8,UniRef:UniRef50_Q8ZIW9,UniRef:UniRef90_P45340;ec_number=3.1.15.-
contig_1	tRNAscan-SE	gene	1878934	1879009	.	+	.	ID=GCA000012185_01900_gene;locus_tag=GCA000012185_01900;gene=trnG
contig_1	tRNAscan-SE	tRNA	1878934	1879009	.	+	.	ID=GCA000012185_01900;Name=tRNA-Gly(gcc);locus_tag=GCA000012185_01900;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000012185_01900_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1879034	1879109	.	+	.	ID=GCA000012185_01901_gene;locus_tag=GCA000012185_01901;gene=trnG
contig_1	tRNAscan-SE	tRNA	1879034	1879109	.	+	.	ID=GCA000012185_01901;Name=tRNA-Gly(gcc);locus_tag=GCA000012185_01901;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000012185_01901_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	1879240	1880307	.	-	.	ID=GCA000012185_01902_gene;locus_tag=GCA000012185_01902;gene=wecA
contig_1	Pyrodigal	CDS	1879240	1880307	.	-	0	ID=GCA000012185_01902;Name=undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase;locus_tag=GCA000012185_01902;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase;Dbxref=GO:0000287,GO:0005886,GO:0009103,GO:0009243,GO:0009246,GO:0009276,GO:0016020,GO:0016757,GO:0016780,GO:0030145,GO:0036380,GO:0044038,GO:0071555;gene=wecA;Parent=GCA000012185_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_005688044.1,SO:0001217,UniParc:UPI000045E9FC,UniRef:UniRef100_A0A2S9S5U0,UniRef:UniRef50_P45341,UniRef:UniRef90_P45341,VFDB:VFC0258,VFDB:VFG013508;ec_number=2.7.8.33
contig_1	Pyrodigal	gene	1880382	1882973	.	-	.	ID=GCA000012185_01903_gene;locus_tag=GCA000012185_01903;gene=glnD
contig_1	Pyrodigal	CDS	1880382	1882973	.	-	0	ID=GCA000012185_01903;Name=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;locus_tag=GCA000012185_01903;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;Dbxref=GO:0006808,GO:0008081,GO:0008773;gene=glnD;Parent=GCA000012185_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2844,COG:OT,RefSeq:WP_011272763.1,SO:0001217,UniParc:UPI000053E30C,UniRef:UniRef100_Q4QJM6,UniRef:UniRef50_Q65SZ8,UniRef:UniRef90_P43919
contig_1	Pyrodigal	gene	1883067	1883873	.	-	.	ID=GCA000012185_01904_gene;locus_tag=GCA000012185_01904;gene=map
contig_1	Pyrodigal	CDS	1883067	1883873	.	-	0	ID=GCA000012185_01904;Name=type I methionyl aminopeptidase;locus_tag=GCA000012185_01904;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0005829,GO:0006508,GO:0046872,GO:0070006;gene=map;Parent=GCA000012185_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,KEGG:K01265,RefSeq:WP_005649958.1,SO:0001217,UniParc:UPI000039ACEB,UniRef:UniRef100_A0A2S9S3A7,UniRef:UniRef50_P44421,UniRef:UniRef90_P44421;ec_number=3.4.11.18
contig_1	Pyrodigal	gene	1884009	1884353	.	+	.	ID=GCA000012185_01905_gene;locus_tag=GCA000012185_01905;gene=erpA
contig_1	Pyrodigal	CDS	1884009	1884353	.	+	0	ID=GCA000012185_01905;Name=iron-sulfur cluster insertion protein ErpA;locus_tag=GCA000012185_01905;product=iron-sulfur cluster insertion protein ErpA;Dbxref=GO:0005506,GO:0005829,GO:0016226,GO:0051536,GO:0051537,GO:0051539,GO:0106035;gene=erpA;Parent=GCA000012185_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_005670302.1,SO:0001217,UniParc:UPI000053E30D,UniRef:UniRef100_Q4QJM4,UniRef:UniRef50_P45344,UniRef:UniRef90_P45344
contig_1	Pyrodigal	gene	1884310	1884708	.	+	.	ID=GCA000012185_01906_gene;locus_tag=GCA000012185_01906;gene=yacL
contig_1	Pyrodigal	CDS	1884310	1884708	.	+	0	ID=GCA000012185_01906;Name=UPF0231 protein HI_1724;locus_tag=GCA000012185_01906;product=UPF0231 protein HI_1724;gene=yacL;Parent=GCA000012185_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3112,COG:S,SO:0001217,UniRef:UniRef50_P44297,UniRef:UniRef90_P44297
contig_1	Pyrodigal	gene	1884715	1887060	.	+	.	ID=GCA000012185_01907_gene;locus_tag=GCA000012185_01907;gene=mrcB
contig_1	Pyrodigal	CDS	1884715	1887060	.	+	0	ID=GCA000012185_01907;Name=penicillin-binding protein 1B;locus_tag=GCA000012185_01907;product=penicillin-binding protein 1B;Dbxref=GO:0005886,GO:0006508,GO:0008233,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009252,GO:0009274,GO:0030288,GO:0046677,GO:0071555;gene=mrcB;Parent=GCA000012185_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K05365,RefSeq:WP_011272765.1,SO:0001217,UniParc:UPI000053E30E,UniRef:UniRef100_Q4QJM2,UniRef:UniRef50_P45345,UniRef:UniRef90_P45345;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	1887233	1888105	.	+	.	ID=GCA000012185_01908_gene;locus_tag=GCA000012185_01908;gene=purC
contig_1	Pyrodigal	CDS	1887233	1888105	.	+	0	ID=GCA000012185_01908;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000012185_01908;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0006164,GO:0006189;gene=purC;Parent=GCA000012185_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0152,COG:F,RefSeq:WP_041174772.1,SO:0001217,UniParc:UPI0002E44D7D,UniRef:UniRef100_Q4QJM1,UniRef:UniRef50_P43851,UniRef:UniRef90_P43851;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	1888261	1889595	.	+	.	ID=GCA000012185_01909_gene;locus_tag=GCA000012185_01909;gene=argG
contig_1	Pyrodigal	CDS	1888261	1889595	.	+	0	ID=GCA000012185_01909;Name=argininosuccinate synthase;locus_tag=GCA000012185_01909;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526,GO:0042803;gene=argG;Parent=GCA000012185_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_005688053.1,SO:0001217,UniParc:UPI000053E310,UniRef:UniRef100_Q4QJM0,UniRef:UniRef50_P0A6E4,UniRef:UniRef90_P44315;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	1889666	1890859	.	-	.	ID=GCA000012185_01910_gene;locus_tag=GCA000012185_01910;gene=mntH
contig_1	Pyrodigal	CDS	1889666	1890859	.	-	0	ID=GCA000012185_01910;Name=putative membrane protein HI_1728;locus_tag=GCA000012185_01910;product=putative membrane protein HI_1728;Dbxref=GO:0005384,GO:0005886,GO:0006828,GO:0015086,GO:0034755;gene=mntH;Parent=GCA000012185_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_005688055.1,SO:0001217,UniParc:UPI000053E311,UniRef:UniRef100_A0A2R3G4Q4,UniRef:UniRef50_O05087,UniRef:UniRef90_O05087
contig_1	Pyrodigal	gene	1890903	1891640	.	-	.	ID=GCA000012185_01911_gene;locus_tag=GCA000012185_01911;gene=pxpA
contig_1	Pyrodigal	CDS	1890903	1891640	.	-	0	ID=GCA000012185_01911;Name=5-oxoprolinase subunit PxpA;locus_tag=GCA000012185_01911;product=5-oxoprolinase subunit PxpA;Dbxref=GO:0003824,GO:0005524,GO:0005975,GO:0017168;gene=pxpA;Parent=GCA000012185_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1540,COG:E,KEGG:K07160,RefSeq:WP_005688057.1,SO:0001217,UniParc:UPI00003CD92E,UniRef:UniRef100_Q4QJL8,UniRef:UniRef50_P45347,UniRef:UniRef90_P45347;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1891627	1892556	.	-	.	ID=GCA000012185_01912_gene;locus_tag=GCA000012185_01912;gene=pxpC
contig_1	Pyrodigal	CDS	1891627	1892556	.	-	0	ID=GCA000012185_01912;Name=5-oxoprolinase subunit C;locus_tag=GCA000012185_01912;product=5-oxoprolinase subunit C;Dbxref=GO:0005524,GO:0017168;gene=pxpC;Parent=GCA000012185_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_011272767.1,SO:0001217,UniParc:UPI00003CD92F,UniRef:UniRef100_A0A2R3G0H4,UniRef:UniRef50_P44298,UniRef:UniRef90_P44298;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1892553	1893194	.	-	.	ID=GCA000012185_01913_gene;locus_tag=GCA000012185_01913;gene=pxpB
contig_1	Pyrodigal	CDS	1892553	1893194	.	-	0	ID=GCA000012185_01913;Name=5-oxoprolinase subunit PxpB;locus_tag=GCA000012185_01913;product=5-oxoprolinase subunit PxpB;Dbxref=GO:0005524,GO:0005975,GO:0008152,GO:0017168;gene=pxpB;Parent=GCA000012185_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_005688060.1,SO:0001217,UniParc:UPI00003CD930,UniRef:UniRef100_A0A2R3FQ40,UniRef:UniRef50_P44299,UniRef:UniRef90_P44299;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1893456	1895435	.	-	.	ID=GCA000012185_01914_gene;locus_tag=GCA000012185_01914;gene=rnb
contig_1	Pyrodigal	CDS	1893456	1895435	.	-	0	ID=GCA000012185_01914;Name=exoribonuclease II;locus_tag=GCA000012185_01914;product=exoribonuclease II;Dbxref=GO:0003723,GO:0005829,GO:0006401,GO:0006402,GO:0008859;gene=rnb;Parent=GCA000012185_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005688061.1,SO:0001217,UniParc:UPI000053E312,UniRef:UniRef100_Q4QJL5,UniRef:UniRef50_P44440,UniRef:UniRef90_Q4QJL5;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	1895533	1896321	.	-	.	ID=GCA000012185_01915_gene;locus_tag=GCA000012185_01915;gene=fabI
contig_1	Pyrodigal	CDS	1895533	1896321	.	-	0	ID=GCA000012185_01915;Name=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI;locus_tag=GCA000012185_01915;product=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI;Dbxref=GO:0004318,GO:0030497,GO:0042802;gene=fabI;Parent=GCA000012185_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_005649928.1,SO:0001217,UniParc:UPI000019B331,UniRef:UniRef100_P44432,UniRef:UniRef50_P44432,UniRef:UniRef90_P44432;ec_number=1.3.1.9
contig_1	Pyrodigal	gene	1896500	1898083	.	+	.	ID=GCA000012185_01916_gene;locus_tag=GCA000012185_01916;gene=prfC
contig_1	Pyrodigal	CDS	1896500	1898083	.	+	0	ID=GCA000012185_01916;Name=peptide chain release factor 3;locus_tag=GCA000012185_01916;product=peptide chain release factor 3;Dbxref=GO:0003747,GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150,GO:0097216;gene=prfC;Parent=GCA000012185_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_005688062.1,SO:0001217,UniParc:UPI000053E314,UniRef:UniRef100_Q4QJL3,UniRef:UniRef50_P0A7I4,UniRef:UniRef90_P43928
contig_1	Pyrodigal	gene	1898159	1898392	.	-	.	ID=GCA000012185_01917_gene;locus_tag=GCA000012185_01917
contig_1	Pyrodigal	CDS	1898159	1898392	.	-	0	ID=GCA000012185_01917;Name=putative protein HI_1736;locus_tag=GCA000012185_01917;product=putative protein HI_1736;Dbxref=GO:0005886;Parent=GCA000012185_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011272769.1,SO:0001217,UniParc:UPI00003CD83B,UniRef:UniRef100_A0A2S9S5V8,UniRef:UniRef50_P44300,UniRef:UniRef90_P44300
contig_1	Pyrodigal	gene	1898495	1898824	.	-	.	ID=GCA000012185_01918_gene;locus_tag=GCA000012185_01918;gene=azlD
contig_1	Pyrodigal	CDS	1898495	1898824	.	-	0	ID=GCA000012185_01918;Name=putative protein HI_1737;locus_tag=GCA000012185_01918;product=putative protein HI_1737;Dbxref=GO:0005886;gene=azlD;Parent=GCA000012185_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1687,COG:E,RefSeq:WP_005649924.1,SO:0001217,UniParc:UPI000039ACF7,UniRef:UniRef100_A0A1Q5Y3I1,UniRef:UniRef50_O07923,UniRef:UniRef90_P44301
contig_1	Pyrodigal	gene	1898821	1899555	.	-	.	ID=GCA000012185_01919_gene;locus_tag=GCA000012185_01919;gene=azlC
contig_1	Pyrodigal	CDS	1898821	1899555	.	-	0	ID=GCA000012185_01919;Name=azaleucine resistance protein AzlC;locus_tag=GCA000012185_01919;product=azaleucine resistance protein AzlC;Dbxref=GO:0005886,GO:0006865,GO:0015171,GO:0016020,GO:1903785;gene=azlC;Parent=GCA000012185_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1296,COG:E,KEGG:K26605,RefSeq:WP_011272770.1,SO:0001217,UniParc:UPI00003CD83C,UniRef:UniRef100_A0A2R3G4R1,UniRef:UniRef50_P44302,UniRef:UniRef90_P44302
contig_1	Pyrodigal	gene	1899565	1900494	.	-	.	ID=GCA000012185_01920_gene;locus_tag=GCA000012185_01920;gene=metR
contig_1	Pyrodigal	CDS	1899565	1900494	.	-	0	ID=GCA000012185_01920;Name=HTH-type transcriptional regulator MetR;locus_tag=GCA000012185_01920;product=HTH-type transcriptional regulator MetR;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009086;gene=metR;Parent=GCA000012185_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_011272771.1,SO:0001217,UniParc:UPI00003CD83D,UniRef:UniRef100_A0A2S9S5W1,UniRef:UniRef50_P45349,UniRef:UniRef90_P45349
contig_1	Infernal	gene	1900729	1900844	.	-	.	ID=GCA000012185_01921_gene;locus_tag=GCA000012185_01921;gene=rrf
contig_1	Infernal	rRNA	1900729	1900844	2.7e-14	-	.	ID=GCA000012185_01921;Name=5S ribosomal RNA;locus_tag=GCA000012185_01921;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000012185_01921_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	1901087	1904202	.	-	.	ID=GCA000012185_01922_gene;locus_tag=GCA000012185_01922;gene=rrl
contig_1	Infernal	rRNA	1901087	1904202	3e-06	-	.	ID=GCA000012185_01922;Name=23S ribosomal RNA;locus_tag=GCA000012185_01922;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000012185_01922_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	1904602	1904677	.	-	.	ID=GCA000012185_01923_gene;locus_tag=GCA000012185_01923;gene=trnA
contig_1	tRNAscan-SE	tRNA	1904602	1904677	.	-	.	ID=GCA000012185_01923;Name=tRNA-Ala(tgc);locus_tag=GCA000012185_01923;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000012185_01923_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	1904763	1904839	.	-	.	ID=GCA000012185_01924_gene;locus_tag=GCA000012185_01924;gene=trnI
contig_1	tRNAscan-SE	tRNA	1904763	1904839	.	-	.	ID=GCA000012185_01924;Name=tRNA-Ile(gat);locus_tag=GCA000012185_01924;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000012185_01924_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	1904919	1906458	.	-	.	ID=GCA000012185_01925_gene;locus_tag=GCA000012185_01925;gene=rrs
contig_1	Infernal	rRNA	1904919	1906458	5.8e-47	-	.	ID=GCA000012185_01925;Name=16S ribosomal RNA;locus_tag=GCA000012185_01925;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000012185_01925_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	1906825	1907970	.	-	.	ID=GCA000012185_01926_gene;locus_tag=GCA000012185_01926;gene=lldD
contig_1	Pyrodigal	CDS	1906825	1907970	.	-	0	ID=GCA000012185_01926;Name=FMN-dependent L-lactate dehydrogenase LldD;locus_tag=GCA000012185_01926;product=FMN-dependent L-lactate dehydrogenase LldD;Dbxref=GO:0004457,GO:0004459,GO:0005886,GO:0006089,GO:0009060,GO:0010181;gene=lldD;Parent=GCA000012185_01926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_011272772.1,SO:0001217,UniParc:UPI000045E9A3,UniRef:UniRef100_Q4QJK8,UniRef:UniRef50_P33232,UniRef:UniRef90_P46454;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	1908182	1908991	.	-	.	ID=GCA000012185_01927_gene;locus_tag=GCA000012185_01927;gene=murI
contig_1	Pyrodigal	CDS	1908182	1908991	.	-	0	ID=GCA000012185_01927;Name=glutamate racemase;locus_tag=GCA000012185_01927;product=glutamate racemase;Dbxref=GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=murI;Parent=GCA000012185_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_011272773.1,SO:0001217,UniParc:UPI00003CD91B,UniRef:UniRef100_Q4QJK7,UniRef:UniRef50_P52973,UniRef:UniRef90_P52973;ec_number=5.1.1.3
contig_1	Pyrodigal	gene	1909021	1911102	.	-	.	ID=GCA000012185_01928_gene;locus_tag=GCA000012185_01928;gene=recG
contig_1	Pyrodigal	CDS	1909021	1911102	.	-	0	ID=GCA000012185_01928;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000012185_01928;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000012185_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,KEGG:K03655,RefSeq:WP_011272774.1,SO:0001217,UniParc:UPI00003CD91C,UniRef:UniRef100_A0A2S9S813,UniRef:UniRef50_P43809,UniRef:UniRef90_P43809;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1911099	1913213	.	-	.	ID=GCA000012185_01929_gene;locus_tag=GCA000012185_01929;gene=spoT
contig_1	Pyrodigal	CDS	1911099	1913213	.	-	0	ID=GCA000012185_01929;Name=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;locus_tag=GCA000012185_01929;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;Dbxref=GO:0008728,GO:0008893,GO:0015969,GO:0015970,GO:0042594;gene=spoT;Parent=GCA000012185_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,RefSeq:WP_011272775.1,SO:0001217,UniParc:UPI000053E315,UniRef:UniRef100_A0AAJ8WC72,UniRef:UniRef50_P43811,UniRef:UniRef90_P43811;ec_number=3.1.7.2
contig_1	Pyrodigal	gene	1913286	1913552	.	-	.	ID=GCA000012185_01930_gene;locus_tag=GCA000012185_01930;gene=rpoZ
contig_1	Pyrodigal	CDS	1913286	1913552	.	-	0	ID=GCA000012185_01930;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA000012185_01930;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351;gene=rpoZ;Parent=GCA000012185_01930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_005693900.1,SO:0001217,UniParc:UPI00001347F7,UniRef:UniRef100_P43740,UniRef:UniRef50_Q9KNM3,UniRef:UniRef90_P43740;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1913615	1914241	.	-	.	ID=GCA000012185_01931_gene;locus_tag=GCA000012185_01931;gene=gmk
contig_1	Pyrodigal	CDS	1913615	1914241	.	-	0	ID=GCA000012185_01931;Name=guanylate kinase;locus_tag=GCA000012185_01931;product=guanylate kinase;Dbxref=GO:0004385,GO:0005524,GO:0005829,GO:0006163;gene=gmk;Parent=GCA000012185_01931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0194,COG:F,RefSeq:WP_005649899.1,SO:0001217,UniParc:UPI000039ACFF,UniRef:UniRef100_Q4QJK3,UniRef:UniRef50_P44310,UniRef:UniRef90_P44310;ec_number=2.7.4.8