##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Staphylococcus aureus JKD6159
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 2818670
contig_1	Bakta	region	1	2818670	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
contig_1	Pyrodigal	gene	1	1362	.	+	.	ID=GCA000144955_00001_gene;locus_tag=GCA000144955_00001;gene=dnaA
contig_1	Pyrodigal	CDS	1	1362	.	+	0	ID=GCA000144955_00001;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000144955_00001;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887;gene=dnaA;Parent=GCA000144955_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,SO:0001217,UniRef:UniRef50_Q2G2H5,UniRef:UniRef90_Q2G2H5;ec_number=3.6.4.-
contig_1	BLAST+	rep_origin	1374	1639	.	?	.	ID=BPGLLONNDN_2796;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	1640	2773	.	+	.	ID=GCA000144955_00002_gene;locus_tag=GCA000144955_00002;gene=dnaN
contig_1	Pyrodigal	CDS	1640	2773	.	+	0	ID=GCA000144955_00002;Name=DNA polymerase III subunit beta;locus_tag=GCA000144955_00002;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009360;gene=dnaN;Parent=GCA000144955_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_000969805.1,SO:0001217,UniParc:UPI0001DD969E,UniRef:UniRef100_UPI0001DD969E,UniRef:UniRef50_Q9RCA1,UniRef:UniRef90_Q5HK00;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3163	3399	.	+	.	ID=GCA000144955_00003_gene;locus_tag=GCA000144955_00003;gene=ybcJ
contig_1	Pyrodigal	CDS	3163	3399	.	+	0	ID=GCA000144955_00003;Name=S4 domain-containing protein YaaA;locus_tag=GCA000144955_00003;product=S4 domain-containing protein YaaA;gene=ybcJ;Parent=GCA000144955_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2501,COG:J,KEGG:K14761,SO:0001217,UniRef:UniRef50_A0A028ZHC3,UniRef:UniRef90_A0A7Z7YU32
contig_1	Pyrodigal	gene	3396	4508	.	+	.	ID=GCA000144955_00004_gene;locus_tag=GCA000144955_00004;gene=recF
contig_1	Pyrodigal	CDS	3396	4508	.	+	0	ID=GCA000144955_00004;Name=DNA replication/repair protein RecF;locus_tag=GCA000144955_00004;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000144955_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_000775113.1,SO:0001217,UniParc:UPI000005498D,UniRef:UniRef100_Q2G275,UniRef:UniRef50_Q9CE70,UniRef:UniRef90_Q2G275
contig_1	Pyrodigal	gene	4518	6452	.	+	.	ID=GCA000144955_00005_gene;locus_tag=GCA000144955_00005;gene=gyrB
contig_1	Pyrodigal	CDS	4518	6452	.	+	0	ID=GCA000144955_00005;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000144955_00005;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046872;gene=gyrB;Parent=GCA000144955_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_000255582.1,SO:0001217,UniParc:UPI0001DD96A0,UniRef:UniRef100_UPI0001DD96A0,UniRef:UniRef50_Q6GKU0,UniRef:UniRef90_Q6GKU0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	6489	9149	.	+	.	ID=GCA000144955_00006_gene;locus_tag=GCA000144955_00006;gene=gyrA
contig_1	Pyrodigal	CDS	6489	9149	.	+	0	ID=GCA000144955_00006;Name=DNA gyrase subunit A;locus_tag=GCA000144955_00006;product=DNA gyrase subunit A;Dbxref=GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006259,GO:0006261,GO:0006265,GO:0009330,GO:0034335,GO:0046677;gene=gyrA;Parent=GCA000144955_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_000819081.1,SO:0001217,UniParc:UPI0001DD96A1,UniRef:UniRef100_UPI0001DD96A1,UniRef:UniRef50_Q2FKQ0,UniRef:UniRef90_Q2FKQ0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	9231	10043	.	-	.	ID=GCA000144955_00007_gene;locus_tag=GCA000144955_00007;gene=nnrD
contig_1	Pyrodigal	CDS	9231	10043	.	-	0	ID=GCA000144955_00007;Name=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;locus_tag=GCA000144955_00007;product=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;Dbxref=GO:0005524,GO:0046496,GO:0052855,GO:0052856,GO:0110051;gene=nnrD;Parent=GCA000144955_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0063,COG:F,RefSeq:WP_000449218.1,SO:0001217,UniParc:UPI00000D9B7B,UniRef:UniRef100_Q2G2P8,UniRef:UniRef50_Q2G2P8,UniRef:UniRef90_Q2G2P8;ec_number=4.2.1.136
contig_1	Pyrodigal	gene	10369	11883	.	+	.	ID=GCA000144955_00008_gene;locus_tag=GCA000144955_00008;gene=hutH
contig_1	Pyrodigal	CDS	10369	11883	.	+	0	ID=GCA000144955_00008;Name=histidine ammonia-lyase;locus_tag=GCA000144955_00008;product=histidine ammonia-lyase;Dbxref=GO:0004397,GO:0005737,GO:0006548,GO:0019556,GO:0019557;gene=hutH;Parent=GCA000144955_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2986,COG:E,KEGG:K01745,RefSeq:WP_000177480.1,SO:0001217,UniParc:UPI0001DD96A2,UniRef:UniRef100_UPI0001DD96A2,UniRef:UniRef50_P10944,UniRef:UniRef90_P64415;ec_number=4.3.1.3
contig_1	Infernal	regulatory_region	11956	12171	1.8e-15	+	.	ID=BPGLLONNDN_164;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	12261	13547	.	+	.	ID=GCA000144955_00009_gene;locus_tag=GCA000144955_00009;gene=serS
contig_1	Pyrodigal	CDS	12261	13547	.	+	0	ID=GCA000144955_00009;Name=serine--tRNA ligase;locus_tag=GCA000144955_00009;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260,GO:0016740;gene=serS;Parent=GCA000144955_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,KEGG:K01875,RefSeq:WP_000884324.1,SO:0001217,UniParc:UPI0001DD96A3,UniRef:UniRef100_UPI0001DD96A3,UniRef:UniRef50_P95689,UniRef:UniRef90_P95689;ec_number=6.1.1.11
contig_1	Pyrodigal	gene	14194	14889	.	+	.	ID=GCA000144955_00010_gene;locus_tag=GCA000144955_00010;gene=azlC
contig_1	Pyrodigal	CDS	14194	14889	.	+	0	ID=GCA000144955_00010;Name=Branched-chain amino acid ABC transporter permease;locus_tag=GCA000144955_00010;product=Branched-chain amino acid ABC transporter permease;gene=azlC;Parent=GCA000144955_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1296,COG:E,KEGG:K26605,RefSeq:WP_000207097.1,SO:0001217,UniParc:UPI0001DD96A4,UniRef:UniRef100_UPI0001DD96A4,UniRef:UniRef50_Q2G2P6,UniRef:UniRef90_Q2G2P6
contig_1	Pyrodigal	gene	14886	15215	.	+	.	ID=GCA000144955_00011_gene;locus_tag=GCA000144955_00011;gene=azlD2
contig_1	Pyrodigal	CDS	14886	15215	.	+	0	ID=GCA000144955_00011;Name=AzlD domain-containing protein;locus_tag=GCA000144955_00011;product=AzlD domain-containing protein;gene=azlD2;Parent=GCA000144955_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4392,COG:E,RefSeq:WP_000628052.1,SO:0001217,UniParc:UPI0001DD96A5,UniRef:UniRef100_A0A380DQH1,UniRef:UniRef50_Q2G2T5,UniRef:UniRef90_Q2G2T5
contig_1	Infernal	regulatory_region	15420	15518	9.9e-14	+	.	ID=BPGLLONNDN_170;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	15578	16546	.	+	.	ID=GCA000144955_00012_gene;locus_tag=GCA000144955_00012;gene=mET2
contig_1	Pyrodigal	CDS	15578	16546	.	+	0	ID=GCA000144955_00012;Name=Alpha/beta fold hydrolase;locus_tag=GCA000144955_00012;product=Alpha/beta fold hydrolase;gene=mET2;Parent=GCA000144955_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2021,COG:E,RefSeq:WP_000186499.1,SO:0001217,UniParc:UPI0001DD96A6,UniRef:UniRef100_UPI0001DD96A6,UniRef:UniRef50_A0A0Z4IRW6,UniRef:UniRef90_A0A0Z4IRW6
contig_1	Pyrodigal	gene	16854	17777	.	+	.	ID=GCA000144955_00013_gene;locus_tag=GCA000144955_00013;gene=yybS
contig_1	Pyrodigal	CDS	16854	17777	.	+	0	ID=GCA000144955_00013;Name=DUF2232 domain-containing protein;locus_tag=GCA000144955_00013;product=DUF2232 domain-containing protein;gene=yybS;Parent=GCA000144955_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4241,COG:S,SO:0001217,UniRef:UniRef50_Q2G2T2,UniRef:UniRef90_Q2G2T2
contig_1	Pyrodigal	gene	17792	19759	.	+	.	ID=GCA000144955_00014_gene;locus_tag=GCA000144955_00014;gene=gdpP
contig_1	Pyrodigal	CDS	17792	19759	.	+	0	ID=GCA000144955_00014;Name=cyclic-di-AMP phosphodiesterase GdpP;locus_tag=GCA000144955_00014;product=cyclic-di-AMP phosphodiesterase GdpP;gene=gdpP;Parent=GCA000144955_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081643,BlastRules:WP_003242517,COG:COG3887,COG:T,KEGG:K22927,RefSeq:WP_001081636.1,SO:0001217,UniParc:UPI0001DD96A8,UniRef:UniRef100_UPI0001DD96A8,UniRef:UniRef50_A0A389PUT3,UniRef:UniRef90_A0A389PUT3;ec_number=3.1.4.59
contig_1	Pyrodigal	gene	19756	20202	.	+	.	ID=GCA000144955_00015_gene;locus_tag=GCA000144955_00015;gene=rplI
contig_1	Pyrodigal	CDS	19756	20202	.	+	0	ID=GCA000144955_00015;Name=50S ribosomal protein L9;locus_tag=GCA000144955_00015;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplI;Parent=GCA000144955_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,RefSeq:WP_000864305.1,SO:0001217,UniParc:UPI0000134207,UniRef:UniRef100_Q2FKP1,UniRef:UniRef50_B9DPY3,UniRef:UniRef90_Q2FKP1
contig_1	Pyrodigal	gene	20234	21634	.	+	.	ID=GCA000144955_00016_gene;locus_tag=GCA000144955_00016;gene=dnaB
contig_1	Pyrodigal	CDS	20234	21634	.	+	0	ID=GCA000144955_00016;Name=replicative DNA helicase;locus_tag=GCA000144955_00016;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0005524,GO:0006260;gene=dnaB;Parent=GCA000144955_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,KEGG:K02314,RefSeq:WP_000375648.1,SO:0001217,UniParc:UPI000014D7F6,UniRef:UniRef100_UPI000014D7F6,UniRef:UniRef50_A0A5R9B465,UniRef:UniRef90_A0A5R9B465;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	21913	23196	.	+	.	ID=GCA000144955_00017_gene;locus_tag=GCA000144955_00017;gene=purA
contig_1	Pyrodigal	CDS	21913	23196	.	+	0	ID=GCA000144955_00017;Name=adenylosuccinate synthase;locus_tag=GCA000144955_00017;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040;gene=purA;Parent=GCA000144955_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_000095333.1,SO:0001217,UniParc:UPI0001DD983D,UniRef:UniRef100_A0A0U1MV27,UniRef:UniRef50_Q03ET4,UniRef:UniRef90_Q5HK16;ec_number=6.3.4.4
contig_1	tRNAscan-SE	gene	23626	23700	.	+	.	ID=GCA000144955_00018_gene;locus_tag=GCA000144955_00018;gene=trnE
contig_1	tRNAscan-SE	tRNA	23626	23700	.	+	.	ID=GCA000144955_00018;Name=tRNA-Glu(ttc);locus_tag=GCA000144955_00018;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000144955_00018_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	23708	23780	.	+	.	ID=GCA000144955_00019_gene;locus_tag=GCA000144955_00019;gene=trnD
contig_1	tRNAscan-SE	tRNA	23708	23780	.	+	.	ID=GCA000144955_00019;Name=tRNA-Asp(gtc);locus_tag=GCA000144955_00019;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000144955_00019_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	24386	25087	.	+	.	ID=GCA000144955_00020_gene;locus_tag=GCA000144955_00020;gene=yycF
contig_1	Pyrodigal	CDS	24386	25087	.	+	0	ID=GCA000144955_00020;Name=response regulator YycF;locus_tag=GCA000144955_00020;product=response regulator YycF;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=yycF;Parent=GCA000144955_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000101976.1,SO:0001217,UniParc:UPI00000D7820,UniRef:UniRef100_Q2G2U6,UniRef:UniRef50_P37478,UniRef:UniRef90_Q2G2U6
contig_1	Pyrodigal	gene	25100	26926	.	+	.	ID=GCA000144955_00021_gene;locus_tag=GCA000144955_00021;gene=walK
contig_1	Pyrodigal	CDS	25100	26926	.	+	0	ID=GCA000144955_00021;Name=cell wall metabolism sensor histidine kinase WalK;locus_tag=GCA000144955_00021;product=cell wall metabolism sensor histidine kinase WalK;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0006355,GO:0007165,GO:0007234,GO:0016020,GO:0016310,GO:0030295;gene=walK;Parent=GCA000144955_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,RefSeq:WP_000871607.1,SO:0001217,UniParc:UPI000005499E,UniRef:UniRef100_Q2G2U4,UniRef:UniRef50_Q2G2U4,UniRef:UniRef90_Q2G2U4;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	26919	28253	.	+	.	ID=GCA000144955_00022_gene;locus_tag=GCA000144955_00022;gene=yycH
contig_1	Pyrodigal	CDS	26919	28253	.	+	0	ID=GCA000144955_00022;Name=two-component system activity regulator YycH;locus_tag=GCA000144955_00022;product=two-component system activity regulator YycH;gene=yycH;Parent=GCA000144955_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060138.1,SO:0001217,UniParc:UPI0001DD983E,UniRef:UniRef100_UPI0001DD983E,UniRef:UniRef90_A0A6B1RUA2
contig_1	Pyrodigal	gene	28254	29042	.	+	.	ID=GCA000144955_00023_gene;locus_tag=GCA000144955_00023;gene=yycI
contig_1	Pyrodigal	CDS	28254	29042	.	+	0	ID=GCA000144955_00023;Name=Regulatory protein YycH-like domain-containing protein;locus_tag=GCA000144955_00023;product=Regulatory protein YycH-like domain-containing protein;gene=yycI;Parent=GCA000144955_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4853,COG:T,RefSeq:WP_001104161.1,SO:0001217,UniParc:UPI0001DD983F,UniRef:UniRef100_A0A6A9GXK4,UniRef:UniRef50_Q2G2U2,UniRef:UniRef90_Q2G2U2
contig_1	Pyrodigal	gene	29431	30231	.	+	.	ID=GCA000144955_00024_gene;locus_tag=GCA000144955_00024
contig_1	Pyrodigal	CDS	29431	30231	.	+	0	ID=GCA000144955_00024;Name=MBL fold metallo-hydrolase;locus_tag=GCA000144955_00024;product=MBL fold metallo-hydrolase;Parent=GCA000144955_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088650.1,SO:0001217,UniParc:UPI0005C683FD,UniRef:UniRef100_UPI0005C683FD,UniRef:UniRef90_Q2G2U5
contig_1	Pyrodigal	gene	30458	32776	.	+	.	ID=GCA000144955_00025_gene;locus_tag=GCA000144955_00025;gene=adsA
contig_1	Pyrodigal	CDS	30458	32776	.	+	0	ID=GCA000144955_00025;Name=Adenosine synthase A;locus_tag=GCA000144955_00025;product=Adenosine synthase A;gene=adsA;Parent=GCA000144955_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000645778.1,SO:0001217,UniParc:UPI0001DD9841,UniRef:UniRef100_UPI0001DD9841,UniRef:UniRef50_A0AAE8TKC7,UniRef:UniRef90_A0AAE8TKC7,VFDB:VFC0258,VFDB:VFG002420
contig_1	Pyrodigal	gene	33144	33623	.	+	.	ID=GCA000144955_00026_gene;locus_tag=GCA000144955_00026;gene=rlmH
contig_1	Pyrodigal	CDS	33144	33623	.	+	0	ID=GCA000144955_00026;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA000144955_00026;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA000144955_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,RefSeq:WP_000704774.1,SO:0001217,UniParc:UPI0001DD9842,UniRef:UniRef100_A0A1J0HSA1,UniRef:UniRef50_Q8DRQ7,UniRef:UniRef90_Q5HK23;ec_number=2.1.1.177
contig_1	Pyrodigal	gene	33945	35201	.	+	.	ID=GCA000144955_00027_gene;locus_tag=GCA000144955_00027
contig_1	Pyrodigal	CDS	33945	35201	.	+	0	ID=GCA000144955_00027;Name=Protein NO VEIN%2C C-terminal;locus_tag=GCA000144955_00027;product=Protein NO VEIN%2C C-terminal;Parent=GCA000144955_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566670.1,SO:0001217,UniParc:UPI00000D9B85,UniRef:UniRef100_Q5HK24,UniRef:UniRef50_I2FI09,UniRef:UniRef90_I2FI09
contig_1	Pyrodigal	gene	35616	35855	.	+	.	ID=GCA000144955_00028_gene;locus_tag=GCA000144955_00028
contig_1	Pyrodigal	CDS	35616	35855	.	+	0	ID=GCA000144955_00028;Name=hypothetical protein;locus_tag=GCA000144955_00028;product=hypothetical protein;Parent=GCA000144955_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001282728.1,SO:0001217,UniParc:UPI00000D7741,UniRef:UniRef100_Q5HK25,UniRef:UniRef50_Q5HK25,UniRef:UniRef90_Q5HK25
contig_1	Pyrodigal	gene	35887	36561	.	-	.	ID=GCA000144955_00029_gene;locus_tag=GCA000144955_00029;gene=tnp
contig_1	Pyrodigal	CDS	35887	36561	.	-	0	ID=GCA000144955_00029;Name=IS6 family IS431mec transposase;locus_tag=GCA000144955_00029;product=IS6 family IS431mec transposase;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000144955_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3316,COG:X,IS:IS431mec,RefSeq:WP_001106057.1,SO:0001217,UniParc:UPI0000000720,UniRef:UniRef100_P0C1L0,UniRef:UniRef50_P0C1L0,UniRef:UniRef90_P0C1L0
contig_1	Pyrodigal	gene	36819	36986	.	+	.	ID=GCA000144955_00030_gene;locus_tag=GCA000144955_00030;gene=pksG
contig_1	Pyrodigal	CDS	36819	36986	.	+	0	ID=GCA000144955_00030;Name=hydroxymethylglutaryl-CoA synthase;locus_tag=GCA000144955_00030;product=hydroxymethylglutaryl-CoA synthase;Dbxref=GO:0004421;gene=pksG;Parent=GCA000144955_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3425,COG:I,KEGG:K01641,RefSeq:WP_000894158.1,SO:0001217,UniParc:UPI00000D76B1,UniRef:UniRef100_Q5HK27,UniRef:UniRef50_R3WMN8,UniRef:UniRef90_E0D4Z2;ec_number=2.3.3.10
contig_1	Pyrodigal	gene	37863	38606	.	+	.	ID=GCA000144955_00031_gene;locus_tag=GCA000144955_00031;gene=ugpQ
contig_1	Pyrodigal	CDS	37863	38606	.	+	0	ID=GCA000144955_00031;Name=Glycerophosphoryl diester phosphodiesterase;locus_tag=GCA000144955_00031;product=Glycerophosphoryl diester phosphodiesterase;gene=ugpQ;Parent=GCA000144955_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,RefSeq:WP_000958858.1,SO:0001217,UniParc:UPI0000006C77,UniRef:UniRef100_Q5HK29,UniRef:UniRef50_S2XRR6,UniRef:UniRef90_A0A386R0S6
contig_1	Pyrodigal	gene	38703	39131	.	+	.	ID=GCA000144955_00032_gene;locus_tag=GCA000144955_00032;gene=maoC
contig_1	Pyrodigal	CDS	38703	39131	.	+	0	ID=GCA000144955_00032;Name=Acyl dehydratase;locus_tag=GCA000144955_00032;product=Acyl dehydratase;gene=maoC;Parent=GCA000144955_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2030,COG:I,RefSeq:WP_000872606.1,SO:0001217,UniParc:UPI0000006C78,UniRef:UniRef100_Q5HK30,UniRef:UniRef50_P96670,UniRef:UniRef90_A0AAJ5CUA4
contig_1	Pyrodigal	gene	39177	41183	.	-	.	ID=GCA000144955_00033_gene;locus_tag=GCA000144955_00033;gene=mecA
contig_1	Pyrodigal	CDS	39177	41183	.	-	0	ID=GCA000144955_00033;Name=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;locus_tag=GCA000144955_00033;product=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;Dbxref=GO:0008658,GO:0046677;gene=mecA;Parent=GCA000144955_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K02545,NCBIProtein:WP_000721310.1,RefSeq:WP_000721310.1,SO:0001217,UniParc:UPI00000DA0B7,UniRef:UniRef100_Q5HK31,UniRef:UniRef50_P07944,UniRef:UniRef90_Q93IC2;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	41283	42269	.	+	.	ID=GCA000144955_00034_gene;locus_tag=GCA000144955_00034;gene=mecR1
contig_1	Pyrodigal	CDS	41283	42269	.	+	0	ID=GCA000144955_00034;Name=beta-lactam sensor/signal transducer MecR1;locus_tag=GCA000144955_00034;product=beta-lactam sensor/signal transducer MecR1;gene=mecR1;Parent=GCA000144955_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:WP_000952923.1,RefSeq:WP_001549960.1,SO:0001217,UniParc:UPI00000D7692,UniRef:UniRef100_D9Z681,UniRef:UniRef50_D9Z681,UniRef:UniRef90_D9Z681
contig_1	Pyrodigal	gene	42241	42501	.	+	.	ID=GCA000144955_00035_gene;locus_tag=GCA000144955_00035
contig_1	Pyrodigal	CDS	42241	42501	.	+	0	ID=GCA000144955_00035;Name=Type I restriction-modification system%2C restriction subunit R;locus_tag=GCA000144955_00035;product=Type I restriction-modification system%2C restriction subunit R;Parent=GCA000144955_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549961.1,SO:0001217,UniParc:UPI00004B5A75,UniRef:UniRef100_A0A1W5ZMK8,UniRef:UniRef50_A0A1W5ZMK8,UniRef:UniRef90_A0A1W5ZMK8
contig_1	Pyrodigal	gene	42492	44015	.	-	.	ID=GCA000144955_00036_gene;locus_tag=GCA000144955_00036;gene=tnp
contig_1	Pyrodigal	CDS	42492	44015	.	-	0	ID=GCA000144955_00036;Name=IS1182 family transposase;locus_tag=GCA000144955_00036;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3666,COG:X,KEGG:K07487,SO:0001217,UniParc:UPI00000D7792,UniRef:UniRef100_Q3YK41,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q3YK41
contig_1	Pyrodigal	gene	44151	44657	.	-	.	ID=GCA000144955_00037_gene;locus_tag=GCA000144955_00037
contig_1	Pyrodigal	CDS	44151	44657	.	-	0	ID=GCA000144955_00037;Name=Ribosomal RNA large subunit methyltransferase e;locus_tag=GCA000144955_00037;product=Ribosomal RNA large subunit methyltransferase e;Parent=GCA000144955_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4333,COG:S,RefSeq:WP_001092189.1,SO:0001217,UniParc:UPI00000D9B87,UniRef:UniRef100_G5EL89,UniRef:UniRef50_A0A6B9V013,UniRef:UniRef90_M1XJN4
contig_1	Pyrodigal	gene	44672	44983	.	-	.	ID=GCA000144955_00038_gene;locus_tag=GCA000144955_00038
contig_1	Pyrodigal	CDS	44672	44983	.	-	0	ID=GCA000144955_00038;Name=Pyridoxal phosphate-dependent enzyme;locus_tag=GCA000144955_00038;product=Pyridoxal phosphate-dependent enzyme;Parent=GCA000144955_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700851.1,SO:0001217,UniParc:UPI00000D76ED,UniRef:UniRef100_A0A060PLE8,UniRef:UniRef50_A0A0H2VE41,UniRef:UniRef90_A0A060PLE8
contig_1	Pyrodigal	gene	44985	45077	.	-	.	ID=GCA000144955_00039_gene;locus_tag=GCA000144955_00039
contig_1	Pyrodigal	CDS	44985	45077	.	-	0	ID=GCA000144955_00039;Name=Phage protein;locus_tag=GCA000144955_00039;product=Phage protein;Parent=GCA000144955_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015FD6DD,UniRef:UniRef100_U5NZD5,UniRef:UniRef50_X5IHY2,UniRef:UniRef90_U5NZD5
contig_1	Pyrodigal	gene	45070	45420	.	-	.	ID=GCA000144955_00040_gene;locus_tag=GCA000144955_00040
contig_1	Pyrodigal	CDS	45070	45420	.	-	0	ID=GCA000144955_00040;Name=hypothetical protein;locus_tag=GCA000144955_00040;product=hypothetical protein;Parent=GCA000144955_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849672.1,SO:0001217,UniParc:UPI00000D779F,UniRef:UniRef100_A0A060PNX9,UniRef:UniRef50_A0A0H2VDZ4,UniRef:UniRef90_A0A0H2VE21,PFAM:PF06106.16
contig_1	Pyrodigal	gene	45942	47570	.	-	.	ID=GCA000144955_00041_gene;locus_tag=GCA000144955_00041;gene=ccrB
contig_1	Pyrodigal	CDS	45942	47570	.	-	0	ID=GCA000144955_00041;Name=cassette chromosome recombinase CcrB;locus_tag=GCA000144955_00041;product=cassette chromosome recombinase CcrB;Dbxref=GO:0006310,GO:0009009;gene=ccrB;Parent=GCA000144955_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K06400,RefSeq:WP_001186608.1,SO:0001217,UniParc:UPI00001833ED,UniRef:UniRef100_Q83ZD2,UniRef:UniRef50_M1XHI0,UniRef:UniRef90_M1XHI0
contig_1	Pyrodigal	gene	47592	48941	.	-	.	ID=GCA000144955_00042_gene;locus_tag=GCA000144955_00042;gene=ccrA
contig_1	Pyrodigal	CDS	47592	48941	.	-	0	ID=GCA000144955_00042;Name=cassette chromosome recombinase CcrA;locus_tag=GCA000144955_00042;product=cassette chromosome recombinase CcrA;Dbxref=GO:0006310,GO:0009009;gene=ccrA;Parent=GCA000144955_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K06400,RefSeq:WP_000815640.1,SO:0001217,UniParc:UPI00001833EC,UniRef:UniRef100_G5EL93,UniRef:UniRef50_A0A1S2MMY8,UniRef:UniRef90_A5YT64
contig_1	Pyrodigal	gene	49175	50962	.	-	.	ID=GCA000144955_00043_gene;locus_tag=GCA000144955_00043;gene=cch1
contig_1	Pyrodigal	CDS	49175	50962	.	-	0	ID=GCA000144955_00043;Name=cassette chromosome replicative helicase;locus_tag=GCA000144955_00043;product=cassette chromosome replicative helicase;Dbxref=GO:0043138;gene=cch1;Parent=GCA000144955_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000122620.1,SO:0001217,UniParc:UPI00000D9B8A,UniRef:UniRef100_M1XH74,UniRef:UniRef50_A0A0H2VE26,UniRef:UniRef90_A0A221KKM5
contig_1	Pyrodigal	gene	50962	51252	.	-	.	ID=GCA000144955_00044_gene;locus_tag=GCA000144955_00044;gene=ssb
contig_1	Pyrodigal	CDS	50962	51252	.	-	0	ID=GCA000144955_00044;Name=cassette chromosome ssDNA-binding protein;locus_tag=GCA000144955_00044;product=cassette chromosome ssDNA-binding protein;gene=ssb;Parent=GCA000144955_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001036438.1,SO:0001217,UniParc:UPI00000D9B8B,UniRef:UniRef100_D9Z688,UniRef:UniRef50_A0A1B1UYE3,UniRef:UniRef90_D9Z688
contig_1	Pyrodigal	gene	51391	52440	.	+	.	ID=GCA000144955_00045_gene;locus_tag=GCA000144955_00045
contig_1	Pyrodigal	CDS	51391	52440	.	+	0	ID=GCA000144955_00045;Name=ACP synthase;locus_tag=GCA000144955_00045;product=ACP synthase;Parent=GCA000144955_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000613248.1,SO:0001217,UniParc:UPI00000D77AC,UniRef:UniRef100_A0A168PIJ2,UniRef:UniRef50_G5JK78,UniRef:UniRef90_A0A168PIJ2
contig_1	Pyrodigal	gene	53058	54548	.	+	.	ID=GCA000144955_00046_gene;locus_tag=GCA000144955_00046
contig_1	Pyrodigal	CDS	53058	54548	.	+	0	ID=GCA000144955_00046;Name=Transcriptional regulator;locus_tag=GCA000144955_00046;product=Transcriptional regulator;Parent=GCA000144955_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000554504.1,SO:0001217,UniParc:UPI00000D7890,UniRef:UniRef100_D9Z690,UniRef:UniRef50_G5JK79,UniRef:UniRef90_D9Z690
contig_1	Pyrodigal	gene	55172	56176	.	-	.	ID=GCA000144955_00047_gene;locus_tag=GCA000144955_00047
contig_1	Pyrodigal	CDS	55172	56176	.	-	0	ID=GCA000144955_00047;Name=Rhodanese domain-containing protein;locus_tag=GCA000144955_00047;product=Rhodanese domain-containing protein;Parent=GCA000144955_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D7868,UniRef:UniRef100_A0A1W5ZMM1,UniRef:UniRef50_D9Z6D1,UniRef:UniRef90_D9Z6D1
contig_1	Pyrodigal	gene	56429	56800	.	+	.	ID=GCA000144955_00048_gene;locus_tag=GCA000144955_00048
contig_1	Pyrodigal	CDS	56429	56800	.	+	0	ID=GCA000144955_00048;Name=5-methylcytosine-specific restriction enzyme a;locus_tag=GCA000144955_00048;product=5-methylcytosine-specific restriction enzyme a;Parent=GCA000144955_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549968.1,SO:0001217,UniParc:UPI00000D9B8D,UniRef:UniRef100_A0A1W5ZMN8,UniRef:UniRef50_M1XJK9,UniRef:UniRef90_M1XJK9
contig_1	Pyrodigal	gene	56929	57549	.	+	.	ID=GCA000144955_00049_gene;locus_tag=GCA000144955_00049
contig_1	Pyrodigal	CDS	56929	57549	.	+	0	ID=GCA000144955_00049;Name=Restriction endonuclease;locus_tag=GCA000144955_00049;product=Restriction endonuclease;Parent=GCA000144955_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673115.1,SO:0001217,UniParc:UPI0001DD9843,UniRef:UniRef100_UPI0001DD9843,UniRef:UniRef50_A0AAI8DKK5,UniRef:UniRef90_A0AAI8DKK5
contig_1	Pyrodigal	gene	58022	58309	.	+	.	ID=GCA000144955_00050_gene;locus_tag=GCA000144955_00050
contig_1	Pyrodigal	CDS	58022	58309	.	+	0	ID=GCA000144955_00050;Name=AAA family ATPase;locus_tag=GCA000144955_00050;product=AAA family ATPase;Parent=GCA000144955_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044025851.1,SO:0001217,UniParc:UPI0005C544E9,UniRef:UniRef100_UPI0005C544E9,UniRef:UniRef50_UPI0005C544E9,UniRef:UniRef90_UPI0005C544E9
contig_1	Pyrodigal	gene	58522	58743	.	+	.	ID=GCA000144955_00051_gene;locus_tag=GCA000144955_00051
contig_1	Pyrodigal	CDS	58522	58743	.	+	0	ID=GCA000144955_00051;Name=Trans-Golgi membrane protein p230;locus_tag=GCA000144955_00051;product=Trans-Golgi membrane protein p230;Parent=GCA000144955_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384337.1,SO:0001217,UniParc:UPI0003059C9F,UniRef:UniRef100_UPI0031599AAF,UniRef:UniRef50_Q936G7,UniRef:UniRef90_Q936G7
contig_1	Pyrodigal	gene	59066	59689	.	+	.	ID=GCA000144955_00052_gene;locus_tag=GCA000144955_00052;gene=recO
contig_1	Pyrodigal	CDS	59066	59689	.	+	0	ID=GCA000144955_00052;Name=DNA repair protein RecO;locus_tag=GCA000144955_00052;product=DNA repair protein RecO;gene=recO;Parent=GCA000144955_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000067246.1,SO:0001217,UniParc:UPI0001DD9844,UniRef:UniRef100_UPI0001DD9844,UniRef:UniRef50_A0A2S6DPJ0,UniRef:UniRef90_A0A2S6DPJ0
contig_1	Pyrodigal	gene	60619	61533	.	-	.	ID=GCA000144955_00053_gene;locus_tag=GCA000144955_00053
contig_1	Pyrodigal	CDS	60619	61533	.	-	0	ID=GCA000144955_00053;Name=HNH endonuclease;locus_tag=GCA000144955_00053;product=HNH endonuclease;Parent=GCA000144955_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000620305.1,SO:0001217,UniParc:UPI0001DD9845,UniRef:UniRef100_UPI0001DD9845,UniRef:UniRef50_UPI00292941AB,UniRef:UniRef90_UPI00292941AB
contig_1	Pyrodigal	gene	61530	62978	.	-	.	ID=GCA000144955_00054_gene;locus_tag=GCA000144955_00054
contig_1	Pyrodigal	CDS	61530	62978	.	-	0	ID=GCA000144955_00054;Name=AAA family ATPase;locus_tag=GCA000144955_00054;product=AAA family ATPase;Parent=GCA000144955_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001055404.1,SO:0001217,UniParc:UPI0001DD9846,UniRef:UniRef100_UPI0001DD9846,UniRef:UniRef50_A0A7T1F9G7,UniRef:UniRef90_UPI00195F701A
contig_1	Pyrodigal	gene	63166	64680	.	+	.	ID=GCA000144955_00055_gene;locus_tag=GCA000144955_00055
contig_1	Pyrodigal	CDS	63166	64680	.	+	0	ID=GCA000144955_00055;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000144955_00055;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000144955_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_000146509.1,SO:0001217,UniParc:UPI0001DD9847,UniRef:UniRef100_UPI0001DD9847,UniRef:UniRef50_A0A662CNW2,UniRef:UniRef90_A0A0K2JNE4;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	64670	65902	.	+	.	ID=GCA000144955_00056_gene;locus_tag=GCA000144955_00056
contig_1	Pyrodigal	CDS	64670	65902	.	+	0	ID=GCA000144955_00056;Name=Putative type-1 restriction enzyme hindviip specificity protein short s-hindviip;locus_tag=GCA000144955_00056;product=Putative type-1 restriction enzyme hindviip specificity protein short s-hindviip;Parent=GCA000144955_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000394004.1,SO:0001217,UniParc:UPI0001DD99CE,UniRef:UniRef100_UPI0001DD99CE,UniRef:UniRef50_M1XGW9,UniRef:UniRef90_M1XGW9;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	65886	69014	.	+	.	ID=GCA000144955_00057_gene;locus_tag=GCA000144955_00057
contig_1	Pyrodigal	CDS	65886	69014	.	+	0	ID=GCA000144955_00057;Name=Type I restriction enzyme endonuclease subunit;locus_tag=GCA000144955_00057;product=Type I restriction enzyme endonuclease subunit;Parent=GCA000144955_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009764.1,SO:0001217,UniParc:UPI0001DD99CF,UniRef:UniRef100_UPI0001DD99CF,UniRef:UniRef50_A0A223E320,UniRef:UniRef90_A0A0K2JN07
contig_1	Pyrodigal	gene	69127	69834	.	+	.	ID=GCA000144955_00058_gene;locus_tag=GCA000144955_00058
contig_1	Pyrodigal	CDS	69127	69834	.	+	0	ID=GCA000144955_00058;Name=Membrane protein;locus_tag=GCA000144955_00058;product=Membrane protein;Parent=GCA000144955_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000667074.1,SO:0001217,UniParc:UPI0001DD99D0,UniRef:UniRef100_UPI0001DD99D0,UniRef:UniRef50_M1XI28,UniRef:UniRef90_M1XI28
contig_1	Pyrodigal	gene	69827	70330	.	+	.	ID=GCA000144955_00059_gene;locus_tag=GCA000144955_00059
contig_1	Pyrodigal	CDS	69827	70330	.	+	0	ID=GCA000144955_00059;Name=hypothetical protein;locus_tag=GCA000144955_00059;product=hypothetical protein;Parent=GCA000144955_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000575286.1,SO:0001217,UniParc:UPI0001DD99D1,UniRef:UniRef100_UPI0001DD99D1,UniRef:UniRef50_M1XJP1,UniRef:UniRef90_M1XJP1
contig_1	Pyrodigal	gene	70562	70741	.	-	.	ID=GCA000144955_00060_gene;locus_tag=GCA000144955_00060
contig_1	Pyrodigal	CDS	70562	70741	.	-	0	ID=GCA000144955_00060;Name=DUF4811 domain-containing protein;locus_tag=GCA000144955_00060;product=DUF4811 domain-containing protein;Parent=GCA000144955_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532725.1,SO:0001217,UniParc:UPI0001DD99D2,UniRef:UniRef100_UPI0001DD99D2,UniRef:UniRef50_UPI0001DD99D2,UniRef:UniRef90_UPI0001DD99D2
contig_1	Pyrodigal	gene	71413	72384	.	-	.	ID=GCA000144955_00061_gene;locus_tag=GCA000144955_00061
contig_1	Pyrodigal	CDS	71413	72384	.	-	0	ID=GCA000144955_00061;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000144955_00061;product=Amidohydrolase-related domain-containing protein;Parent=GCA000144955_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000140912.1,SO:0001217,UniParc:UPI0001C11B2F,UniRef:UniRef100_A0A2S6DHH9,UniRef:UniRef50_A0A1B1UYH5,UniRef:UniRef90_A0A1B1UYH5
contig_1	Pyrodigal	gene	72437	72808	.	-	.	ID=GCA000144955_00062_gene;locus_tag=GCA000144955_00062;gene=doxX
contig_1	Pyrodigal	CDS	72437	72808	.	-	0	ID=GCA000144955_00062;Name=DoxX family protein;locus_tag=GCA000144955_00062;product=DoxX family protein;gene=doxX;Parent=GCA000144955_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000926749.1,SO:0001217,UniParc:UPI0001C0B4C8,UniRef:UniRef100_A0A0U1MS09,UniRef:UniRef50_S2XC77,UniRef:UniRef90_A0A654CP70
contig_1	Pyrodigal	gene	72828	74219	.	-	.	ID=GCA000144955_00063_gene;locus_tag=GCA000144955_00063;gene=norB
contig_1	Pyrodigal	CDS	72828	74219	.	-	0	ID=GCA000144955_00063;Name=Quinolone resistance protein NorB;locus_tag=GCA000144955_00063;product=Quinolone resistance protein NorB;gene=norB;Parent=GCA000144955_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001246800.1,SO:0001217,UniParc:UPI0001DD99D3,UniRef:UniRef100_UPI0001DD99D3,UniRef:UniRef50_A0A9N8F6U1,UniRef:UniRef90_A0A9N8F6U1
contig_1	Pyrodigal	gene	74333	74536	.	+	.	ID=GCA000144955_00064_gene;locus_tag=GCA000144955_00064
contig_1	Pyrodigal	CDS	74333	74536	.	+	0	ID=GCA000144955_00064;Name=Acetyltransferase;locus_tag=GCA000144955_00064;product=Acetyltransferase;Parent=GCA000144955_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000786143.1,SO:0001217,UniParc:UPI000247782B,UniRef:UniRef100_A0A0U1MSE6,UniRef:UniRef50_A0A0U1MSE6,UniRef:UniRef90_A0A0U1MSE6
contig_1	Pyrodigal	gene	74546	74911	.	+	.	ID=GCA000144955_00065_gene;locus_tag=GCA000144955_00065
contig_1	Pyrodigal	CDS	74546	74911	.	+	0	ID=GCA000144955_00065;Name=Acetyltransferase;locus_tag=GCA000144955_00065;product=Acetyltransferase;Parent=GCA000144955_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001016374.1,SO:0001217,UniParc:UPI0003012C3C,UniRef:UniRef100_A0A5S9C388,UniRef:UniRef50_A0A5S9C388,UniRef:UniRef90_A0A5S9C388
contig_1	Pyrodigal	gene	75185	75760	.	+	.	ID=GCA000144955_00066_gene;locus_tag=GCA000144955_00066
contig_1	Pyrodigal	CDS	75185	75760	.	+	0	ID=GCA000144955_00066;Name=HTH-type transcriptional regulator SAR0097;locus_tag=GCA000144955_00066;product=HTH-type transcriptional regulator SAR0097;Dbxref=GO:0003677;Parent=GCA000144955_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414481.1,SO:0001217,UniParc:UPI0001DD99D4,UniRef:UniRef100_UPI0001DD99D4,UniRef:UniRef50_Q6GKL1,UniRef:UniRef90_Q6GKL1
contig_1	Pyrodigal	gene	76376	76534	.	+	.	ID=GCA000144955_00067_gene;locus_tag=GCA000144955_00067;gene=mazE
contig_1	Pyrodigal	CDS	76376	76534	.	+	0	ID=GCA000144955_00067;Name=Antitoxin MazE;locus_tag=GCA000144955_00067;product=Antitoxin MazE;gene=mazE;Parent=GCA000144955_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000628288.1,SO:0001217,UniParc:UPI0001DD99D5,UniRef:UniRef100_A0A077UWC3,UniRef:UniRef50_A0A654CHF6,UniRef:UniRef90_A0A0N9R1S7
contig_1	Pyrodigal	gene	76534	76647	.	+	.	ID=GCA000144955_00068_gene;locus_tag=GCA000144955_00068;pseudogene=unitary
contig_1	Pyrodigal	CDS	76534	76647	.	+	0	ID=GCA000144955_00068;Name=hypothetical protein;locus_tag=GCA000144955_00068;product=hypothetical protein;pseudogene=unitary;Parent=GCA000144955_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0015F1417C,UniRef:UniRef90_UPI0015F1417C
contig_1	Pyrodigal	gene	76914	77693	.	+	.	ID=GCA000144955_00069_gene;locus_tag=GCA000144955_00069;gene=selZ
contig_1	Pyrodigal	CDS	76914	77693	.	+	0	ID=GCA000144955_00069;Name=staphylococcal enterotoxin type Z;locus_tag=GCA000144955_00069;product=staphylococcal enterotoxin type Z;gene=selZ;Parent=GCA000144955_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11040,NCBIProtein:SUK32596.1,RefSeq:WP_001233387.1,SO:0001217,UniParc:UPI0001DD99D6,UniRef:UniRef100_A0A5S9I2G1,UniRef:UniRef50_A0A5S9I2G1,UniRef:UniRef90_A0A5S9I2G1
contig_1	Pyrodigal	gene	77878	78864	.	-	.	ID=GCA000144955_00070_gene;locus_tag=GCA000144955_00070;gene=dus
contig_1	Pyrodigal	CDS	77878	78864	.	-	0	ID=GCA000144955_00070;Name=putative tRNA-dihydrouridine synthase;locus_tag=GCA000144955_00070;product=putative tRNA-dihydrouridine synthase;Dbxref=GO:0000049,GO:0017150,GO:0050660;gene=dus;Parent=GCA000144955_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_000662032.1,SO:0001217,UniParc:UPI0001C0B4CD,UniRef:UniRef100_A0A8G2M8L1,UniRef:UniRef50_O31546,UniRef:UniRef90_Q5HJT5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	79173	79376	.	+	.	ID=GCA000144955_00071_gene;locus_tag=GCA000144955_00071
contig_1	Pyrodigal	CDS	79173	79376	.	+	0	ID=GCA000144955_00071;Name=DUF6007 domain-containing protein;locus_tag=GCA000144955_00071;product=DUF6007 domain-containing protein;Parent=GCA000144955_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000389771.1,SO:0001217,UniParc:UPI0001DD99D7,UniRef:UniRef100_A0A5S9I274,UniRef:UniRef50_A0A7U7JRZ4,UniRef:UniRef90_A0A6G4IVP3
contig_1	Pyrodigal	gene	79425	79721	.	+	.	ID=GCA000144955_00072_gene;locus_tag=GCA000144955_00072;gene=tfoX
contig_1	Pyrodigal	CDS	79425	79721	.	+	0	ID=GCA000144955_00072;Name=TfoX N-terminal domain protein;locus_tag=GCA000144955_00072;product=TfoX N-terminal domain protein;gene=tfoX;Parent=GCA000144955_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000179890.1,SO:0001217,UniParc:UPI0001DD99D8,UniRef:UniRef100_A0A5S9I2R0,UniRef:UniRef50_Q2G1R1,UniRef:UniRef90_A0A0U1MU10
contig_1	Pyrodigal	gene	79784	81004	.	-	.	ID=GCA000144955_00073_gene;locus_tag=GCA000144955_00073
contig_1	Pyrodigal	CDS	79784	81004	.	-	0	ID=GCA000144955_00073;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_00073;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000144955_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000130759.1,SO:0001217,UniParc:UPI0001C11B37,UniRef:UniRef100_A0A2S6DDX4,UniRef:UniRef50_Q2G1R0,UniRef:UniRef90_Q2G1R0
contig_1	Pyrodigal	gene	80997	81548	.	-	.	ID=GCA000144955_00074_gene;locus_tag=GCA000144955_00074
contig_1	Pyrodigal	CDS	80997	81548	.	-	0	ID=GCA000144955_00074;Name=Flavodoxin family protein;locus_tag=GCA000144955_00074;product=Flavodoxin family protein;Parent=GCA000144955_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000627030.1,SO:0001217,UniParc:UPI0001DD99D9,UniRef:UniRef100_A0A224ATQ6,UniRef:UniRef50_A0A9Q9BMX3,UniRef:UniRef90_A0A2S6D7M9
contig_1	Pyrodigal	gene	81661	82521	.	+	.	ID=GCA000144955_00075_gene;locus_tag=GCA000144955_00075
contig_1	Pyrodigal	CDS	81661	82521	.	+	0	ID=GCA000144955_00075;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000144955_00075;product=HTH lysR-type domain-containing protein;Parent=GCA000144955_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052502.1,SO:0001217,UniParc:UPI0001C11B39,UniRef:UniRef100_A0A2S6DNI8,UniRef:UniRef50_W1Y6F5,UniRef:UniRef90_Q2G1Q8
contig_1	Pyrodigal	gene	83145	83747	.	+	.	ID=GCA000144955_00076_gene;locus_tag=GCA000144955_00076
contig_1	Pyrodigal	CDS	83145	83747	.	+	0	ID=GCA000144955_00076;Name=DUF5079 domain-containing protein;locus_tag=GCA000144955_00076;product=DUF5079 domain-containing protein;Parent=GCA000144955_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000908949.1,SO:0001217,UniParc:UPI0001C11B3A,UniRef:UniRef100_A0A2S6DNI6,UniRef:UniRef50_A0A6G4N7I9,UniRef:UniRef90_A0A6G4N7I9
contig_1	Pyrodigal	gene	84039	84953	.	-	.	ID=GCA000144955_00077_gene;locus_tag=GCA000144955_00077
contig_1	Pyrodigal	CDS	84039	84953	.	-	0	ID=GCA000144955_00077;Name=Xaa-Pro dipeptidyl-peptidase-like domain-containing protein;locus_tag=GCA000144955_00077;product=Xaa-Pro dipeptidyl-peptidase-like domain-containing protein;Parent=GCA000144955_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000814441.1,SO:0001217,UniParc:UPI0001AE9AB1,UniRef:UniRef100_UPI0001AE9AB1,UniRef:UniRef50_A0A0U1MTY4,UniRef:UniRef90_A0A0U1MTY4
contig_1	Pyrodigal	gene	85132	85686	.	+	.	ID=GCA000144955_00078_gene;locus_tag=GCA000144955_00078;gene=tetR
contig_1	Pyrodigal	CDS	85132	85686	.	+	0	ID=GCA000144955_00078;Name=Bacterial regulatory s%2C tetR family protein;locus_tag=GCA000144955_00078;product=Bacterial regulatory s%2C tetR family protein;gene=tetR;Parent=GCA000144955_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001100493.1,SO:0001217,UniParc:UPI0001AE84C6,UniRef:UniRef100_A0A1D4BGR3,UniRef:UniRef50_A0A9X5XL02,UniRef:UniRef90_A0A0U1MT17
contig_1	Pyrodigal	gene	85917	86648	.	+	.	ID=GCA000144955_00079_gene;locus_tag=GCA000144955_00079;gene=bioC
contig_1	Pyrodigal	CDS	85917	86648	.	+	0	ID=GCA000144955_00079;Name=BioC protein;locus_tag=GCA000144955_00079;product=BioC protein;gene=bioC;Parent=GCA000144955_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001181360.1,SO:0001217,UniParc:UPI0001DD99DA,UniRef:UniRef100_A0A5S9ETG1,UniRef:UniRef50_A0A380G5G9,UniRef:UniRef90_A0A077ULW2
contig_1	Pyrodigal	gene	86803	87285	.	+	.	ID=GCA000144955_00080_gene;locus_tag=GCA000144955_00080
contig_1	Pyrodigal	CDS	86803	87285	.	+	0	ID=GCA000144955_00080;Name=DUF3278 domain-containing protein;locus_tag=GCA000144955_00080;product=DUF3278 domain-containing protein;Parent=GCA000144955_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000714386.1,SO:0001217,UniParc:UPI0001DD99DB,UniRef:UniRef100_UPI0001DD99DB,UniRef:UniRef50_Q2G1Q3,UniRef:UniRef90_Q2G1Q3
contig_1	Pyrodigal	gene	87490	88476	.	+	.	ID=GCA000144955_00081_gene;locus_tag=GCA000144955_00081;gene=plc
contig_1	Pyrodigal	CDS	87490	88476	.	+	0	ID=GCA000144955_00081;Name=1-phosphatidylinositol phosphodiesterase;locus_tag=GCA000144955_00081;product=1-phosphatidylinositol phosphodiesterase;Dbxref=GO:0004436,GO:0005576,GO:0008081,GO:0016042;gene=plc;Parent=GCA000144955_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000710579.1,SO:0001217,UniParc:UPI0001DD99DC,UniRef:UniRef100_UPI0001DD99DC,UniRef:UniRef50_Q2G1Q2,UniRef:UniRef90_Q2G1Q2;ec_number=4.6.1.13
contig_1	Pyrodigal	gene	88697	89467	.	+	.	ID=GCA000144955_00082_gene;locus_tag=GCA000144955_00082
contig_1	Pyrodigal	CDS	88697	89467	.	+	0	ID=GCA000144955_00082;Name=tandem-type lipoprotein;locus_tag=GCA000144955_00082;product=tandem-type lipoprotein;Parent=GCA000144955_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977785.1,SO:0001217,UniParc:UPI0001DD99DD,UniRef:UniRef100_UPI0001DD99DD,UniRef:UniRef50_Q2G1Q1,UniRef:UniRef90_UPI0021CF8DD7
contig_1	Pyrodigal	gene	89470	90846	.	+	.	ID=GCA000144955_00083_gene;locus_tag=GCA000144955_00083
contig_1	Pyrodigal	CDS	89470	90846	.	+	0	ID=GCA000144955_00083;Name=Fungal lipase-like domain-containing protein;locus_tag=GCA000144955_00083;product=Fungal lipase-like domain-containing protein;Parent=GCA000144955_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000161983.1,SO:0001217,UniParc:UPI0001DD99DE,UniRef:UniRef100_UPI0001DD99DE,UniRef:UniRef50_A0A1S1GXE0,UniRef:UniRef90_A0A0U1MS32
contig_1	Pyrodigal	gene	90843	91172	.	+	.	ID=GCA000144955_00084_gene;locus_tag=GCA000144955_00084
contig_1	Pyrodigal	CDS	90843	91172	.	+	0	ID=GCA000144955_00084;Name=Cytosolic protein;locus_tag=GCA000144955_00084;product=Cytosolic protein;Parent=GCA000144955_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00038F23F9,UniRef:UniRef100_A0A0U1MS37,UniRef:UniRef50_Q5HKA0,UniRef:UniRef90_A0A0H3JTT7
contig_1	Pyrodigal	gene	91176	91487	.	+	.	ID=GCA000144955_00085_gene;locus_tag=GCA000144955_00085
contig_1	Pyrodigal	CDS	91176	91487	.	+	0	ID=GCA000144955_00085;Name=hypothetical protein;locus_tag=GCA000144955_00085;product=hypothetical protein;Parent=GCA000144955_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000512632.1,SO:0001217,UniParc:UPI0001DD99E0,UniRef:UniRef100_UPI0001DD99E0,UniRef:UniRef50_A0A2K4AMY9,UniRef:UniRef90_A0A2K4AMY9
contig_1	Pyrodigal	gene	91739	92551	.	+	.	ID=GCA000144955_00086_gene;locus_tag=GCA000144955_00086;gene=araC
contig_1	Pyrodigal	CDS	91739	92551	.	+	0	ID=GCA000144955_00086;Name=AraC family transcriptional regulator;locus_tag=GCA000144955_00086;product=AraC family transcriptional regulator;gene=araC;Parent=GCA000144955_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00190C9F36,UniRef:UniRef90_UPI00190C9F36
contig_1	Pyrodigal	gene	92597	93976	.	+	.	ID=GCA000144955_00087_gene;locus_tag=GCA000144955_00087;gene=araC
contig_1	Pyrodigal	CDS	92597	93976	.	+	0	ID=GCA000144955_00087;Name=AraC family transcriptional regulator;locus_tag=GCA000144955_00087;product=AraC family transcriptional regulator;gene=araC;Parent=GCA000144955_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380EBY2,UniRef:UniRef90_A0A5S9ET41
contig_1	Pyrodigal	gene	94127	95305	.	+	.	ID=GCA000144955_00088_gene;locus_tag=GCA000144955_00088;gene=abgB
contig_1	Pyrodigal	CDS	94127	95305	.	+	0	ID=GCA000144955_00088;Name=Peptidase M20 dimerisation domain-containing protein;locus_tag=GCA000144955_00088;product=Peptidase M20 dimerisation domain-containing protein;gene=abgB;Parent=GCA000144955_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001075805.1,SO:0001217,UniParc:UPI0001DD99E1,UniRef:UniRef100_UPI00124850FC,UniRef:UniRef50_A0A380FVH8,UniRef:UniRef90_Q2G1P6
contig_1	Pyrodigal	gene	95307	96695	.	+	.	ID=GCA000144955_00089_gene;locus_tag=GCA000144955_00089;gene=uhpC
contig_1	Pyrodigal	CDS	95307	96695	.	+	0	ID=GCA000144955_00089;Name=Quinolone resistance protein NorB;locus_tag=GCA000144955_00089;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000144955_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001006433.1,SO:0001217,UniParc:UPI0001DD99E2,UniRef:UniRef100_UPI0001DD99E2,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q9F0Z2
contig_1	Pyrodigal	gene	97042	98505	.	+	.	ID=GCA000144955_00090_gene;locus_tag=GCA000144955_00090
contig_1	Pyrodigal	CDS	97042	98505	.	+	0	ID=GCA000144955_00090;Name=NAD(P)H-binding protein;locus_tag=GCA000144955_00090;product=NAD(P)H-binding protein;Parent=GCA000144955_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000722414.1,SO:0001217,UniParc:UPI0001DD99E3,UniRef:UniRef100_UPI0001DD99E3,UniRef:UniRef50_A0A0H2VIH0,UniRef:UniRef90_UPI0001DD99E3
contig_1	Pyrodigal	gene	98568	99062	.	+	.	ID=GCA000144955_00091_gene;locus_tag=GCA000144955_00091
contig_1	Pyrodigal	CDS	98568	99062	.	+	0	ID=GCA000144955_00091;Name=TspO/MBR family protein;locus_tag=GCA000144955_00091;product=TspO/MBR family protein;Parent=GCA000144955_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000143248.1,SO:0001217,UniParc:UPI0001DD99E4,UniRef:UniRef100_UPI0001DD99E4,UniRef:UniRef50_B9DJA9,UniRef:UniRef90_UPI0001DD99E4
contig_1	Pyrodigal	gene	99288	100955	.	-	.	ID=GCA000144955_00092_gene;locus_tag=GCA000144955_00092;gene=nptA
contig_1	Pyrodigal	CDS	99288	100955	.	-	0	ID=GCA000144955_00092;Name=PhoU domain-containing protein;locus_tag=GCA000144955_00092;product=PhoU domain-containing protein;gene=nptA;Parent=GCA000144955_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1283,COG:P,SO:0001217,UniParc:UPI00000D784A,UniRef:UniRef100_A0A0H3JKV1,UniRef:UniRef50_Q2G1P4,UniRef:UniRef90_Q2G1P4
contig_1	Pyrodigal	gene	101276	103051	.	-	.	ID=GCA000144955_00093_gene;locus_tag=GCA000144955_00093
contig_1	Pyrodigal	CDS	101276	103051	.	-	0	ID=GCA000144955_00093;Name=oleate hydratase;locus_tag=GCA000144955_00093;product=oleate hydratase;Dbxref=GO:0006631,GO:0050151,GO:0071949;Parent=GCA000144955_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4716,COG:S,RefSeq:WP_000291829.1,SO:0001217,UniParc:UPI0001DD99E5,UniRef:UniRef100_UPI0001DD99E5,UniRef:UniRef50_B5XK69,UniRef:UniRef90_Q2G1P3;ec_number=4.2.1.53
contig_1	Pyrodigal	gene	103403	103876	.	+	.	ID=GCA000144955_00094_gene;locus_tag=GCA000144955_00094
contig_1	Pyrodigal	CDS	103403	103876	.	+	0	ID=GCA000144955_00094;Name=DUF1648 domain-containing protein;locus_tag=GCA000144955_00094;product=DUF1648 domain-containing protein;Parent=GCA000144955_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036325.1,SO:0001217,UniParc:UPI0001DD99E6,UniRef:UniRef100_UPI0001DD99E6,UniRef:UniRef50_Q2G1P0,UniRef:UniRef90_Q2G1P0
contig_1	Pyrodigal	gene	104138	105730	.	+	.	ID=GCA000144955_00095_gene;locus_tag=GCA000144955_00095;gene=lldP
contig_1	Pyrodigal	CDS	104138	105730	.	+	0	ID=GCA000144955_00095;Name=L-lactate permease;locus_tag=GCA000144955_00095;product=L-lactate permease;gene=lldP;Parent=GCA000144955_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K03303,RefSeq:WP_000173891.1,SO:0001217,UniParc:UPI00000CAADD,UniRef:UniRef100_A0A7Z7W0P4,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2K4AMZ7
contig_1	Pyrodigal	gene	106053	107531	.	-	.	ID=GCA000144955_00096_gene;locus_tag=GCA000144955_00096;gene=spa
contig_1	Pyrodigal	CDS	106053	107531	.	-	0	ID=GCA000144955_00096;Name=Immunoglobulin G binding protein A precursor;locus_tag=GCA000144955_00096;product=Immunoglobulin G binding protein A precursor;gene=spa;Parent=GCA000144955_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14196,SO:0001217,UniRef:UniRef50_C0STU4,UniRef:UniRef90_UPI002481ADAF,VFDB:VFC0235,VFDB:VFG001313
contig_1	Pyrodigal	gene	107952	108704	.	-	.	ID=GCA000144955_00097_gene;locus_tag=GCA000144955_00097;gene=sarS
contig_1	Pyrodigal	CDS	107952	108704	.	-	0	ID=GCA000144955_00097;Name=HTH-type transcriptional regulator SarS;locus_tag=GCA000144955_00097;product=HTH-type transcriptional regulator SarS;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=sarS;Parent=GCA000144955_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876756,COG:COG1846,COG:K,RefSeq:WP_000876751.1,SO:0001217,UniParc:UPI0001DD99E8,UniRef:UniRef100_UPI0001DD99E8,UniRef:UniRef50_Q2G1N7,UniRef:UniRef90_Q2G1N7
contig_1	Pyrodigal	gene	109073	110071	.	-	.	ID=GCA000144955_00098_gene;locus_tag=GCA000144955_00098;gene=fepD
contig_1	Pyrodigal	CDS	109073	110071	.	-	0	ID=GCA000144955_00098;Name=staphyloferrin B ABC transporter permease subunit SirC;locus_tag=GCA000144955_00098;product=staphyloferrin B ABC transporter permease subunit SirC;gene=fepD;Parent=GCA000144955_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000136636,COG:COG0609,COG:P,RefSeq:WP_000136631.1,SO:0001217,UniParc:UPI0001DD99E9,UniRef:UniRef100_UPI0001DD99E9,UniRef:UniRef50_A0A389V9I4,UniRef:UniRef90_A0A389V9I4
contig_1	Pyrodigal	gene	110068	111063	.	-	.	ID=GCA000144955_00099_gene;locus_tag=GCA000144955_00099;gene=fepD
contig_1	Pyrodigal	CDS	110068	111063	.	-	0	ID=GCA000144955_00099;Name=staphyloferrin B ABC transporter permease subunit SirB;locus_tag=GCA000144955_00099;product=staphyloferrin B ABC transporter permease subunit SirB;gene=fepD;Parent=GCA000144955_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000925002,COG:COG0609,COG:P,RefSeq:WP_000925001.1,SO:0001217,UniParc:UPI0001DD9B76,UniRef:UniRef100_UPI0001DD9B76,UniRef:UniRef50_A0A0H2WZW5,UniRef:UniRef90_A0A0H2WZW5
contig_1	Pyrodigal	gene	111079	112071	.	-	.	ID=GCA000144955_00100_gene;locus_tag=GCA000144955_00100;gene=fepB
contig_1	Pyrodigal	CDS	111079	112071	.	-	0	ID=GCA000144955_00100;Name=staphyloferrin B ABC transporter substrate-binding protein SirA;locus_tag=GCA000144955_00100;product=staphyloferrin B ABC transporter substrate-binding protein SirA;gene=fepB;Parent=GCA000144955_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001045111,COG:COG0614,COG:P,RefSeq:WP_001045111.1,SO:0001217,UniParc:UPI00000522E5,UniRef:UniRef100_Q2G1N4,UniRef:UniRef50_S2XE72,UniRef:UniRef90_A0A7U7IE32
contig_1	Pyrodigal	gene	112302	113282	.	+	.	ID=GCA000144955_00101_gene;locus_tag=GCA000144955_00101;gene=sbnA
contig_1	Pyrodigal	CDS	112302	113282	.	+	0	ID=GCA000144955_00101;Name=2%2C3-diaminopropionate biosynthesis protein SbnA;locus_tag=GCA000144955_00101;product=2%2C3-diaminopropionate biosynthesis protein SbnA;Dbxref=GO:0006535,GO:0009058,GO:0016765,GO:0030170;gene=sbnA;Parent=GCA000144955_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000570808,COG:COG0031,COG:E,RefSeq:WP_000570808.1,SO:0001217,UniParc:UPI00000D7883,UniRef:UniRef100_Q2G1N3,UniRef:UniRef50_Q2G1N3,UniRef:UniRef90_Q2G1N3;ec_number=2.5.1.140
contig_1	Pyrodigal	gene	113279	114289	.	+	.	ID=GCA000144955_00102_gene;locus_tag=GCA000144955_00102;gene=sbnB
contig_1	Pyrodigal	CDS	113279	114289	.	+	0	ID=GCA000144955_00102;Name=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;locus_tag=GCA000144955_00102;product=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;Dbxref=GO:0016491,GO:0016639,GO:0019290;gene=sbnB;Parent=GCA000144955_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001078456,COG:COG2423,COG:E,KEGG:K21721,RefSeq:WP_001078456.1,SO:0001217,UniParc:UPI00000522AC,UniRef:UniRef100_Q2G1N2,UniRef:UniRef50_Q2G1N2,UniRef:UniRef90_Q2G1N2;ec_number=1.5.1.51
contig_1	Pyrodigal	gene	114310	116064	.	+	.	ID=GCA000144955_00103_gene;locus_tag=GCA000144955_00103;gene=sbnC
contig_1	Pyrodigal	CDS	114310	116064	.	+	0	ID=GCA000144955_00103;Name=staphyloferrin B biosynthesis protein SbnC;locus_tag=GCA000144955_00103;product=staphyloferrin B biosynthesis protein SbnC;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnC;Parent=GCA000144955_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4264,COG:P,KEGG:K23375,RefSeq:WP_001179387.1,SO:0001217,UniParc:UPI0001DD9B77,UniRef:UniRef100_UPI0001DD9B77,UniRef:UniRef50_Q2G1N1,UniRef:UniRef90_Q2G1N1;ec_number=6.3.2.56
contig_1	Pyrodigal	gene	116141	117313	.	+	.	ID=GCA000144955_00104_gene;locus_tag=GCA000144955_00104;gene=sbnD
contig_1	Pyrodigal	CDS	116141	117313	.	+	0	ID=GCA000144955_00104;Name=staphyloferrin B export MFS transporter;locus_tag=GCA000144955_00104;product=staphyloferrin B export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sbnD;Parent=GCA000144955_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000572580,COG:COG2814,COG:G,KEGG:K23361,SO:0001217,UniRef:UniRef50_Q2G1N0,UniRef:UniRef90_Q2G1N0
contig_1	Pyrodigal	gene	117303	119039	.	+	.	ID=GCA000144955_00105_gene;locus_tag=GCA000144955_00105;gene=sbnE
contig_1	Pyrodigal	CDS	117303	119039	.	+	0	ID=GCA000144955_00105;Name=L-2%2C3-diaminopropanoate--citrate ligase SbnE;locus_tag=GCA000144955_00105;product=L-2%2C3-diaminopropanoate--citrate ligase SbnE;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnE;Parent=GCA000144955_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001179886,COG:COG4264,COG:P,KEGG:K23372,RefSeq:WP_001179879.1,SO:0001217,UniParc:UPI0001DD9B79,UniRef:UniRef100_UPI0001DD9B79,UniRef:UniRef50_Q2G1M9,UniRef:UniRef90_Q2G1M9;ec_number=6.3.2.54
contig_1	Pyrodigal	gene	119020	120798	.	+	.	ID=GCA000144955_00106_gene;locus_tag=GCA000144955_00106;gene=sbnF
contig_1	Pyrodigal	CDS	119020	120798	.	+	0	ID=GCA000144955_00106;Name=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;locus_tag=GCA000144955_00106;product=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnF;Parent=GCA000144955_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001795559,COG:COG4264,COG:P,KEGG:K23374,SO:0001217,UniRef:UniRef50_Q2G1M8,UniRef:UniRef90_Q2G1M8;ec_number=6.3.2.55
contig_1	Pyrodigal	gene	120773	121549	.	+	.	ID=GCA000144955_00107_gene;locus_tag=GCA000144955_00107;gene=sbnG
contig_1	Pyrodigal	CDS	120773	121549	.	+	0	ID=GCA000144955_00107;Name=staphyloferrin B biosynthesis citrate synthase SbnG;locus_tag=GCA000144955_00107;product=staphyloferrin B biosynthesis citrate synthase SbnG;gene=sbnG;Parent=GCA000144955_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001549999,COG:COG3836,COG:G,RefSeq:WP_001186795.1,SO:0001217,UniParc:UPI0001DD9B7B,UniRef:UniRef100_UPI0001DD9B7B,UniRef:UniRef50_Q2G1M7,UniRef:UniRef90_Q2G1M7
contig_1	Pyrodigal	gene	121549	122751	.	+	.	ID=GCA000144955_00108_gene;locus_tag=GCA000144955_00108;gene=sbnH
contig_1	Pyrodigal	CDS	121549	122751	.	+	0	ID=GCA000144955_00108;Name=staphyloferrin B biosynthesis decarboxylase SbnH;locus_tag=GCA000144955_00108;product=staphyloferrin B biosynthesis decarboxylase SbnH;Dbxref=GO:0006596,GO:0008836,GO:0009089,GO:0016831,GO:0019290;gene=sbnH;Parent=GCA000144955_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001223700,COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_001223714.1,SO:0001217,UniParc:UPI0001DD9B7C,UniRef:UniRef100_UPI0001DD9B7C,UniRef:UniRef50_Q2G1M6,UniRef:UniRef90_Q2G1M6;ec_number=4.1.1.117
contig_1	Pyrodigal	gene	122755	123519	.	+	.	ID=GCA000144955_00109_gene;locus_tag=GCA000144955_00109;gene=sbnI
contig_1	Pyrodigal	CDS	122755	123519	.	+	0	ID=GCA000144955_00109;Name=L-serine kinase SbnI;locus_tag=GCA000144955_00109;product=L-serine kinase SbnI;Dbxref=GO:0003677,GO:0005524,GO:0005694,GO:0007059,GO:0016301,GO:0016773,GO:0019290,GO:0045881;gene=sbnI;Parent=GCA000144955_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001015549,COG:COG1475,COG:D,KEGG:K23371,RefSeq:WP_001015549.1,SO:0001217,UniParc:UPI00000D772E,UniRef:UniRef100_Q2G1M5,UniRef:UniRef50_Q2G1M5,UniRef:UniRef90_Q2G1M5;ec_number=2.7.1.225
contig_1	Pyrodigal	gene	123715	124143	.	+	.	ID=GCA000144955_00110_gene;locus_tag=GCA000144955_00110
contig_1	Pyrodigal	CDS	123715	124143	.	+	0	ID=GCA000144955_00110;Name=MFS transporter;locus_tag=GCA000144955_00110;product=MFS transporter;Parent=GCA000144955_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001056929.1,SO:0001217,UniParc:UPI0001DD9B7D,UniRef:UniRef100_UPI0001DD9B7D,UniRef:UniRef50_A0AAP8CQG4,UniRef:UniRef90_A0A6B5FCB4
contig_1	Pyrodigal	gene	124193	124987	.	+	.	ID=GCA000144955_00111_gene;locus_tag=GCA000144955_00111
contig_1	Pyrodigal	CDS	124193	124987	.	+	0	ID=GCA000144955_00111;Name=MFS transporter;locus_tag=GCA000144955_00111;product=MFS transporter;Parent=GCA000144955_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001230658.1,SO:0001217,UniParc:UPI0001DD9B7E,UniRef:UniRef100_UPI00177F20C9,UniRef:UniRef50_A0AA40JK57,UniRef:UniRef90_A0AA40JK57
contig_1	Pyrodigal	gene	125199	125975	.	+	.	ID=GCA000144955_00112_gene;locus_tag=GCA000144955_00112;gene=butA
contig_1	Pyrodigal	CDS	125199	125975	.	+	0	ID=GCA000144955_00112;Name=(S)-acetoin forming diacetyl reductase;locus_tag=GCA000144955_00112;product=(S)-acetoin forming diacetyl reductase;Dbxref=GO:0019152,GO:0045150,GO:0052588;gene=butA;Parent=GCA000144955_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000183771.1,SO:0001217,UniParc:UPI00000D7675,UniRef:UniRef100_Q5HJP2,UniRef:UniRef50_Q5HJP2,UniRef:UniRef90_Q5HJP2;ec_number=1.1.1.304
contig_1	Pyrodigal	gene	126320	127291	.	+	.	ID=GCA000144955_00113_gene;locus_tag=GCA000144955_00113;gene=wcaG
contig_1	Pyrodigal	CDS	126320	127291	.	+	0	ID=GCA000144955_00113;Name=NAD-dependent dehydratase;locus_tag=GCA000144955_00113;product=NAD-dependent dehydratase;gene=wcaG;Parent=GCA000144955_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000442712.1,SO:0001217,UniParc:UPI00000D7839,UniRef:UniRef100_Q2MGY5,UniRef:UniRef50_Q2MGY5,UniRef:UniRef90_Q2MGY5
contig_1	Pyrodigal	gene	127254	127946	.	+	.	ID=GCA000144955_00114_gene;locus_tag=GCA000144955_00114;gene=wcaJ
contig_1	Pyrodigal	CDS	127254	127946	.	+	0	ID=GCA000144955_00114;Name=Bacterial sugar transferase domain-containing protein;locus_tag=GCA000144955_00114;product=Bacterial sugar transferase domain-containing protein;gene=wcaJ;Parent=GCA000144955_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2148,COG:M,RefSeq:WP_000736077.1,SO:0001217,UniParc:UPI0001DA1FA2,UniRef:UniRef100_A0A2S6D7K2,UniRef:UniRef50_Q2G287,UniRef:UniRef90_Q2G287
contig_1	Pyrodigal	gene	128156	129322	.	+	.	ID=GCA000144955_00115_gene;locus_tag=GCA000144955_00115;gene=rfaB
contig_1	Pyrodigal	CDS	128156	129322	.	+	0	ID=GCA000144955_00115;Name=Exopolysaccharide biosynthesis glycosyltransferase EpsF;locus_tag=GCA000144955_00115;product=Exopolysaccharide biosynthesis glycosyltransferase EpsF;gene=rfaB;Parent=GCA000144955_00115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000692495.1,SO:0001217,UniParc:UPI0001DA1FA3,UniRef:UniRef100_A0A0D1I4R6,UniRef:UniRef50_A0AAJ4YWB0,UniRef:UniRef90_A0AAJ4YWB0
contig_1	Pyrodigal	gene	129303	130541	.	+	.	ID=GCA000144955_00116_gene;locus_tag=GCA000144955_00116
contig_1	Pyrodigal	CDS	129303	130541	.	+	0	ID=GCA000144955_00116;Name=O-antigen ligase-related domain-containing protein;locus_tag=GCA000144955_00116;product=O-antigen ligase-related domain-containing protein;Parent=GCA000144955_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431235.1,SO:0001217,UniParc:UPI0001DD9B7F,UniRef:UniRef100_A0AA40MHQ4,UniRef:UniRef50_Q2G288,UniRef:UniRef90_A0A0H2WZU5
contig_1	Pyrodigal	gene	130531	131961	.	+	.	ID=GCA000144955_00117_gene;locus_tag=GCA000144955_00117;gene=rfbX
contig_1	Pyrodigal	CDS	130531	131961	.	+	0	ID=GCA000144955_00117;Name=Polysaccharide biosynthesis protein C-terminal domain-containing protein;locus_tag=GCA000144955_00117;product=Polysaccharide biosynthesis protein C-terminal domain-containing protein;gene=rfbX;Parent=GCA000144955_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2244,COG:M,RefSeq:WP_000834105.1,SO:0001217,UniParc:UPI0001DD9B80,UniRef:UniRef100_UPI0001DD9B80,UniRef:UniRef50_Q2G262,UniRef:UniRef90_Q2G262
contig_1	Pyrodigal	gene	132229	132828	.	+	.	ID=GCA000144955_00118_gene;locus_tag=GCA000144955_00118;gene=sodM
contig_1	Pyrodigal	CDS	132229	132828	.	+	0	ID=GCA000144955_00118;Name=Superoxide dismutase [Mn/Fe] 2;locus_tag=GCA000144955_00118;product=Superoxide dismutase [Mn/Fe] 2;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodM;Parent=GCA000144955_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000874681.1,SO:0001217,UniParc:UPI0000054701,UniRef:UniRef100_Q2G261,UniRef:UniRef50_Q2G261,UniRef:UniRef90_Q2G261;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	133198	133923	.	+	.	ID=GCA000144955_00119_gene;locus_tag=GCA000144955_00119;gene=sasD
contig_1	Pyrodigal	CDS	133198	133923	.	+	0	ID=GCA000144955_00119;Name=cell-wall-anchored protein SasD;locus_tag=GCA000144955_00119;product=cell-wall-anchored protein SasD;gene=sasD;Parent=GCA000144955_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_070002951,SO:0001217,UniRef:UniRef50_Q2G260,UniRef:UniRef90_A0A6B0CXZ7
contig_1	Pyrodigal	gene	134114	134854	.	-	.	ID=GCA000144955_00120_gene;locus_tag=GCA000144955_00120;gene=mngR
contig_1	Pyrodigal	CDS	134114	134854	.	-	0	ID=GCA000144955_00120;Name=GntR family transcriptional regulator;locus_tag=GCA000144955_00120;product=GntR family transcriptional regulator;gene=mngR;Parent=GCA000144955_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_000195132.1,SO:0001217,UniParc:UPI00000D9BB7,UniRef:UniRef100_A0A1M3SHM6,UniRef:UniRef50_S2XH22,UniRef:UniRef90_A0A380DIC9
contig_1	Pyrodigal	gene	135105	135812	.	+	.	ID=GCA000144955_00121_gene;locus_tag=GCA000144955_00121;gene=deoD
contig_1	Pyrodigal	CDS	135105	135812	.	+	0	ID=GCA000144955_00121;Name=purine-nucleoside phosphorylase;locus_tag=GCA000144955_00121;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000144955_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000843292.1,SO:0001217,UniParc:UPI00000CAD09,UniRef:UniRef100_Q2G228,UniRef:UniRef50_Q894Z3,UniRef:UniRef90_Q2G228;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	135813	137171	.	+	.	ID=GCA000144955_00122_gene;locus_tag=GCA000144955_00122;gene=tet(38)
contig_1	Pyrodigal	CDS	135813	137171	.	+	0	ID=GCA000144955_00122;Name=tetracycline efflux MFS transporter Tet(38);locus_tag=GCA000144955_00122;product=tetracycline efflux MFS transporter Tet(38);Dbxref=GO:0008493,GO:0015904;gene=tet(38);Parent=GCA000144955_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08168,NCBIProtein:WP_001100293.1,SO:0001217,UniRef:UniRef50_A0A658WD55,UniRef:UniRef90_A0A658WD55
contig_1	Pyrodigal	gene	137252	137914	.	+	.	ID=GCA000144955_00123_gene;locus_tag=GCA000144955_00123;gene=deoC
contig_1	Pyrodigal	CDS	137252	137914	.	+	0	ID=GCA000144955_00123;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000144955_00123;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0009264;gene=deoC;Parent=GCA000144955_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01619,RefSeq:WP_000667256.1,SO:0001217,UniParc:UPI0001DD9B83,UniRef:UniRef100_UPI0001DD9B83,UniRef:UniRef50_Q39NL8,UniRef:UniRef90_UPI0013030FB8;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	137942	139120	.	+	.	ID=GCA000144955_00124_gene;locus_tag=GCA000144955_00124;gene=deoB
contig_1	Pyrodigal	CDS	137942	139120	.	+	0	ID=GCA000144955_00124;Name=phosphopentomutase;locus_tag=GCA000144955_00124;product=phosphopentomutase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0006015,GO:0006018,GO:0008973,GO:0009117,GO:0030145,GO:0043094;gene=deoB;Parent=GCA000144955_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1015,COG:G,RefSeq:WP_000197806.1,SO:0001217,UniParc:UPI00000D773B,UniRef:UniRef100_Q2G227,UniRef:UniRef50_Q8DQD0,UniRef:UniRef90_Q2G227;ec_number=5.4.2.7
contig_1	Pyrodigal	gene	139251	140066	.	-	.	ID=GCA000144955_00125_gene;locus_tag=GCA000144955_00125;gene=phnE
contig_1	Pyrodigal	CDS	139251	140066	.	-	0	ID=GCA000144955_00125;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000144955_00125;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000144955_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_000191090.1,SO:0001217,UniParc:UPI0001DD9B84,UniRef:UniRef100_UPI0001DD9B84,UniRef:UniRef50_A0A7Z1N8X5,UniRef:UniRef90_A0A2K4ALN9;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	140063	140863	.	-	.	ID=GCA000144955_00126_gene;locus_tag=GCA000144955_00126;gene=phnE
contig_1	Pyrodigal	CDS	140063	140863	.	-	0	ID=GCA000144955_00126;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000144955_00126;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000144955_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_001127863.1,SO:0001217,UniParc:UPI00000D9BBB,UniRef:UniRef100_A0A7Z7W0F0,UniRef:UniRef50_E3EAH8,UniRef:UniRef90_A0A0Z4EPE7;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	140865	141638	.	-	.	ID=GCA000144955_00127_gene;locus_tag=GCA000144955_00127;gene=phnC
contig_1	Pyrodigal	CDS	140865	141638	.	-	0	ID=GCA000144955_00127;Name=phosphonate ABC transporter ATP-binding protein;locus_tag=GCA000144955_00127;product=phosphonate ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015416,GO:0015716,GO:0016020,GO:0016887;gene=phnC;Parent=GCA000144955_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3638,COG:P,RefSeq:WP_000078097.1,SO:0001217,UniParc:UPI0001DD9B85,UniRef:UniRef100_UPI0001DD9B85,UniRef:UniRef50_Q2G1L8,UniRef:UniRef90_Q2G1L8;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	141852	142808	.	-	.	ID=GCA000144955_00128_gene;locus_tag=GCA000144955_00128;gene=phnD
contig_1	Pyrodigal	CDS	141852	142808	.	-	0	ID=GCA000144955_00128;Name=Phosphonate ABC transporter phosphate-binding periplasmic component;locus_tag=GCA000144955_00128;product=Phosphonate ABC transporter phosphate-binding periplasmic component;gene=phnD;Parent=GCA000144955_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3221,COG:P,KEGG:K02044,RefSeq:WP_000713598.1,SO:0001217,UniParc:UPI0001DD9B86,UniRef:UniRef100_UPI0001DD9B86,UniRef:UniRef50_D3EDC2,UniRef:UniRef90_A0A077UPS7
contig_1	Pyrodigal	gene	143037	144536	.	+	.	ID=GCA000144955_00129_gene;locus_tag=GCA000144955_00129
contig_1	Pyrodigal	CDS	143037	144536	.	+	0	ID=GCA000144955_00129;Name=DNA-binding protein;locus_tag=GCA000144955_00129;product=DNA-binding protein;Parent=GCA000144955_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000725617.1,SO:0001217,UniParc:UPI0001DD9B87,UniRef:UniRef100_UPI0001DD9B87,UniRef:UniRef50_Q2G1L6,UniRef:UniRef90_Q2G1L6
contig_1	Pyrodigal	gene	144587	146122	.	+	.	ID=GCA000144955_00130_gene;locus_tag=GCA000144955_00130;gene=ushA
contig_1	Pyrodigal	CDS	144587	146122	.	+	0	ID=GCA000144955_00130;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA000144955_00130;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;gene=ushA;Parent=GCA000144955_00130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000065020.1,SO:0001217,UniParc:UPI0001DD9B88,UniRef:UniRef100_UPI0001DD9B88,UniRef:UniRef50_A0A390ZG35,UniRef:UniRef90_A0A390ZG35
contig_1	Pyrodigal	gene	146268	146582	.	+	.	ID=GCA000144955_00131_gene;locus_tag=GCA000144955_00131
contig_1	Pyrodigal	CDS	146268	146582	.	+	0	ID=GCA000144955_00131;Name=hypothetical protein;locus_tag=GCA000144955_00131;product=hypothetical protein;Parent=GCA000144955_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8G2M8S2,UniRef:UniRef90_A0A8G2M8S2
contig_1	Pyrodigal	gene	146645	147043	.	+	.	ID=GCA000144955_00132_gene;locus_tag=GCA000144955_00132;pseudogene=unitary
contig_1	Pyrodigal	CDS	146645	147043	.	+	0	ID=GCA000144955_00132;Name=Cytosolic protein;locus_tag=GCA000144955_00132;product=Cytosolic protein;pseudogene=unitary;Parent=GCA000144955_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A6A9GQ09,UniRef:UniRef90_A0A811I4G1
contig_1	Pyrodigal	gene	147049	148224	.	+	.	ID=GCA000144955_00133_gene;locus_tag=GCA000144955_00133;gene=immA
contig_1	Pyrodigal	CDS	147049	148224	.	+	0	ID=GCA000144955_00133;Name=ImmA/IrrE family metallo-endopeptidase;locus_tag=GCA000144955_00133;product=ImmA/IrrE family metallo-endopeptidase;gene=immA;Parent=GCA000144955_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2856,COG:O,RefSeq:WP_000469830.1,SO:0001217,UniParc:UPI0001DD9B89,UniRef:UniRef100_A0A5S9C2Z6,UniRef:UniRef50_A0A380G485,UniRef:UniRef90_A0A390TWT6
contig_1	Pyrodigal	gene	148612	151221	.	+	.	ID=GCA000144955_00134_gene;locus_tag=GCA000144955_00134;gene=adhE
contig_1	Pyrodigal	CDS	148612	151221	.	+	0	ID=GCA000144955_00134;Name=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;locus_tag=GCA000144955_00134;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;Dbxref=GO:0004022,GO:0006066,GO:0015976,GO:0016620,GO:0046872;gene=adhE;Parent=GCA000144955_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,RefSeq:WP_000955774.1,SO:0001217,UniParc:UPI0001DD9D39,UniRef:UniRef100_UPI0001DD9D39,UniRef:UniRef50_A0A0H2ZM56,UniRef:UniRef90_A0A0U1MVV5;ec_number=1.2.1.10
contig_1	Pyrodigal	gene	151566	152234	.	+	.	ID=GCA000144955_00135_gene;locus_tag=GCA000144955_00135;gene=capA
contig_1	Pyrodigal	CDS	151566	152234	.	+	0	ID=GCA000144955_00135;Name=capsular polysaccharide type 5/8 biosynthesis protein CapA;locus_tag=GCA000144955_00135;product=capsular polysaccharide type 5/8 biosynthesis protein CapA;Dbxref=GO:0000271,GO:0004713,GO:0005351,GO:0005886,GO:0015774;gene=capA;Parent=GCA000144955_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000446300,COG:COG3944,COG:M,RefSeq:WP_000446295.1,SO:0001217,UniParc:UPI0001DD9D3A,UniRef:UniRef100_UPI0001DD9D3A,UniRef:UniRef50_P72367,UniRef:UniRef90_P72367
contig_1	Pyrodigal	gene	152250	152936	.	+	.	ID=GCA000144955_00136_gene;locus_tag=GCA000144955_00136;gene=cap8B
contig_1	Pyrodigal	CDS	152250	152936	.	+	0	ID=GCA000144955_00136;Name=type 8 capsular polysaccharide synthesis protein Cap8B;locus_tag=GCA000144955_00136;product=type 8 capsular polysaccharide synthesis protein Cap8B;gene=cap8B;Parent=GCA000144955_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000037328,COG:COG0489,COG:D,RefSeq:WP_000037326.1,SO:0001217,UniParc:UPI00005FE181,UniRef:UniRef100_A0AA44A4R2,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ8
contig_1	Pyrodigal	gene	152939	153703	.	+	.	ID=GCA000144955_00137_gene;locus_tag=GCA000144955_00137;gene=cap8C
contig_1	Pyrodigal	CDS	152939	153703	.	+	0	ID=GCA000144955_00137;Name=type 8 capsular polysaccharide synthesis protein Cap8C;locus_tag=GCA000144955_00137;product=type 8 capsular polysaccharide synthesis protein Cap8C;gene=cap8C;Parent=GCA000144955_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000565297,COG:COG4464,COG:T,RefSeq:WP_000565293.1,SO:0001217,UniParc:UPI00000B1E86,UniRef:UniRef100_P72369,UniRef:UniRef50_P72369,UniRef:UniRef90_P72369
contig_1	Pyrodigal	gene	153723	155546	.	+	.	ID=GCA000144955_00138_gene;locus_tag=GCA000144955_00138;gene=cap8D
contig_1	Pyrodigal	CDS	153723	155546	.	+	0	ID=GCA000144955_00138;Name=type 8 capsular polysaccharide synthesis protein Cap8D;locus_tag=GCA000144955_00138;product=type 8 capsular polysaccharide synthesis protein Cap8D;gene=cap8D;Parent=GCA000144955_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000940793,COG:COG1086,COG:MO,RefSeq:WP_000940782.1,SO:0001217,UniParc:UPI0001DD9D3B,UniRef:UniRef100_A0AAW9XDA0,UniRef:UniRef50_P39853,UniRef:UniRef90_A0AAE8PB03
contig_1	Pyrodigal	gene	155536	156564	.	+	.	ID=GCA000144955_00139_gene;locus_tag=GCA000144955_00139;gene=cap8E
contig_1	Pyrodigal	CDS	155536	156564	.	+	0	ID=GCA000144955_00139;Name=type 8 capsular polysaccharide synthesis protein Cap8E;locus_tag=GCA000144955_00139;product=type 8 capsular polysaccharide synthesis protein Cap8E;gene=cap8E;Parent=GCA000144955_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000459062,COG:COG1086,COG:MO,KEGG:K15894,RefSeq:WP_000459062.1,SO:0001217,UniParc:UPI00000D7843,UniRef:UniRef100_A0A0E1XAC1,UniRef:UniRef50_P95699,UniRef:UniRef90_A0A0Y9S337;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	156577	157686	.	+	.	ID=GCA000144955_00140_gene;locus_tag=GCA000144955_00140;gene=cap8F
contig_1	Pyrodigal	CDS	156577	157686	.	+	0	ID=GCA000144955_00140;Name=type 8 capsular polysaccharide synthesis protein Cap8F;locus_tag=GCA000144955_00140;product=type 8 capsular polysaccharide synthesis protein Cap8F;gene=cap8F;Parent=GCA000144955_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001028293,COG:COG1898,COG:M,KEGG:K19068,RefSeq:WP_001028287.1,SO:0001217,UniParc:UPI0001DD9D3C,UniRef:UniRef100_UPI0001DD9D3C,UniRef:UniRef50_A0A1V4SI62,UniRef:UniRef90_A0A390ZI88;ec_number=1.1.1.367
contig_1	Pyrodigal	gene	157690	158814	.	+	.	ID=GCA000144955_00141_gene;locus_tag=GCA000144955_00141;gene=cap8G
contig_1	Pyrodigal	CDS	157690	158814	.	+	0	ID=GCA000144955_00141;Name=type 8 capsular polysaccharide synthesis protein Cap8G;locus_tag=GCA000144955_00141;product=type 8 capsular polysaccharide synthesis protein Cap8G;Dbxref=GO:0008761;gene=cap8G;Parent=GCA000144955_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413169,COG:COG0381,COG:M,KEGG:K24258,RefSeq:WP_000413171.1,SO:0001217,UniParc:UPI00000546E4,UniRef:UniRef100_Q2G1K2,UniRef:UniRef50_A0A9X2B7Q1,UniRef:UniRef90_A0A077UEL0;ec_number=5.1.3.28
contig_1	Pyrodigal	gene	158817	159896	.	+	.	ID=GCA000144955_00142_gene;locus_tag=GCA000144955_00142;gene=cap8H
contig_1	Pyrodigal	CDS	158817	159896	.	+	0	ID=GCA000144955_00142;Name=type 8 capsular polysaccharide synthesis protein Cap8H;locus_tag=GCA000144955_00142;product=type 8 capsular polysaccharide synthesis protein Cap8H;gene=cap8H;Parent=GCA000144955_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001216935,RefSeq:WP_001216931.1,SO:0001217,UniParc:UPI0001DD9D3D,UniRef:UniRef100_A0A6A9GPZ8,UniRef:UniRef50_A0A0E1XKL7,UniRef:UniRef90_A0A0E1XKL7
contig_1	Pyrodigal	gene	159889	161283	.	+	.	ID=GCA000144955_00143_gene;locus_tag=GCA000144955_00143;gene=cap8I
contig_1	Pyrodigal	CDS	159889	161283	.	+	0	ID=GCA000144955_00143;Name=type 8 capsular polysaccharide synthesis protein Cap8I;locus_tag=GCA000144955_00143;product=type 8 capsular polysaccharide synthesis protein Cap8I;gene=cap8I;Parent=GCA000144955_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001034053,RefSeq:WP_001034060.1,SO:0001217,UniParc:UPI0001DD9D3E,UniRef:UniRef100_UPI0001DD9D3E,UniRef:UniRef50_P72375,UniRef:UniRef90_P72375
contig_1	Pyrodigal	gene	161280	161837	.	+	.	ID=GCA000144955_00144_gene;locus_tag=GCA000144955_00144;gene=cap8J
contig_1	Pyrodigal	CDS	161280	161837	.	+	0	ID=GCA000144955_00144;Name=type 8 capsular polysaccharide synthesis protein Cap8J;locus_tag=GCA000144955_00144;product=type 8 capsular polysaccharide synthesis protein Cap8J;gene=cap8J;Parent=GCA000144955_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000636149,RefSeq:WP_000636152.1,SO:0001217,UniParc:UPI0001DD9D3F,UniRef:UniRef100_UPI0001DD9D3F,UniRef:UniRef50_G7V8Z9,UniRef:UniRef90_A0A2U0I9Y5
contig_1	Pyrodigal	gene	161846	163084	.	+	.	ID=GCA000144955_00145_gene;locus_tag=GCA000144955_00145;gene=cap8K
contig_1	Pyrodigal	CDS	161846	163084	.	+	0	ID=GCA000144955_00145;Name=type 8 capsular polysaccharide synthesis protein Cap8K;locus_tag=GCA000144955_00145;product=type 8 capsular polysaccharide synthesis protein Cap8K;gene=cap8K;Parent=GCA000144955_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001238807,RefSeq:WP_001238808.1,SO:0001217,UniParc:UPI0001DD9D40,UniRef:UniRef100_UPI0001DD9D40,UniRef:UniRef50_A0A853V073,UniRef:UniRef90_P72377
contig_1	Pyrodigal	gene	163118	164323	.	+	.	ID=GCA000144955_00146_gene;locus_tag=GCA000144955_00146;gene=cap8L
contig_1	Pyrodigal	CDS	163118	164323	.	+	0	ID=GCA000144955_00146;Name=type 8 capsular polysaccharide synthesis protein Cap8L;locus_tag=GCA000144955_00146;product=type 8 capsular polysaccharide synthesis protein Cap8L;gene=cap8L;Parent=GCA000144955_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001291010,COG:COG0438,COG:M,KEGG:K03208,RefSeq:WP_001291027.1,SO:0001217,UniParc:UPI0001DD9D41,UniRef:UniRef100_UPI0001DD9D41,UniRef:UniRef50_P95705,UniRef:UniRef90_P95705
contig_1	Pyrodigal	gene	164334	164891	.	+	.	ID=GCA000144955_00147_gene;locus_tag=GCA000144955_00147;gene=cap8M
contig_1	Pyrodigal	CDS	164334	164891	.	+	0	ID=GCA000144955_00147;Name=type 8 capsular polysaccharide synthesis protein Cap8M;locus_tag=GCA000144955_00147;product=type 8 capsular polysaccharide synthesis protein Cap8M;gene=cap8M;Parent=GCA000144955_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825101,COG:COG2148,COG:M,KEGG:K13012,RefSeq:WP_000825098.1,SO:0001217,UniParc:UPI00000522E7,UniRef:UniRef100_Q2G1J6,UniRef:UniRef50_A0A2D7LN21,UniRef:UniRef90_A0A7U7JS51
contig_1	Pyrodigal	gene	164891	165778	.	+	.	ID=GCA000144955_00148_gene;locus_tag=GCA000144955_00148;gene=capN
contig_1	Pyrodigal	CDS	164891	165778	.	+	0	ID=GCA000144955_00148;Name=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;locus_tag=GCA000144955_00148;product=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;gene=capN;Parent=GCA000144955_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001230668,COG:COG0451,COG:M,RefSeq:WP_001230693.1,SO:0001217,UniParc:UPI0001DD9D42,UniRef:UniRef100_UPI0001DD9D42,UniRef:UniRef50_A0A390B3T4,UniRef:UniRef90_P95707
contig_1	Pyrodigal	gene	165832	167094	.	+	.	ID=GCA000144955_00149_gene;locus_tag=GCA000144955_00149;gene=cap8O
contig_1	Pyrodigal	CDS	165832	167094	.	+	0	ID=GCA000144955_00149;Name=type 8 capsular polysaccharide synthesis protein Cap8O;locus_tag=GCA000144955_00149;product=type 8 capsular polysaccharide synthesis protein Cap8O;gene=cap8O;Parent=GCA000144955_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779494,COG:COG0677,COG:M,KEGG:K02472,RefSeq:WP_000779516.1,SO:0001217,UniParc:UPI0001DD9D43,UniRef:UniRef100_UPI0001DD9D43,UniRef:UniRef50_A0A239ZQS7,UniRef:UniRef90_A0A9N8IHJ7;ec_number=1.1.1.336
contig_1	Pyrodigal	gene	167171	168316	.	+	.	ID=GCA000144955_00150_gene;locus_tag=GCA000144955_00150;gene=cap8P
contig_1	Pyrodigal	CDS	167171	168316	.	+	0	ID=GCA000144955_00150;Name=type 8 capsular polysaccharide synthesis protein Cap8P;locus_tag=GCA000144955_00150;product=type 8 capsular polysaccharide synthesis protein Cap8P;Dbxref=GO:0008761;gene=cap8P;Parent=GCA000144955_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723452,COG:COG0381,COG:M,RefSeq:WP_000723442.1,SO:0001217,UniParc:UPI0001DD9D44,UniRef:UniRef100_UPI0001DD9D44,UniRef:UniRef50_A0A847MAJ7,UniRef:UniRef90_A0AAE8PBV8;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	168381	168707	.	-	.	ID=GCA000144955_00151_gene;locus_tag=GCA000144955_00151;gene=isdI
contig_1	Pyrodigal	CDS	168381	168707	.	-	0	ID=GCA000144955_00151;Name=staphylobilin-forming heme oxygenase IsdI;locus_tag=GCA000144955_00151;product=staphylobilin-forming heme oxygenase IsdI;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdI;Parent=GCA000144955_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000480603,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000480607.1,SO:0001217,UniParc:UPI0001DD9D45,UniRef:UniRef100_UPI0001DD9D45,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2G1J2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	168714	169097	.	-	.	ID=GCA000144955_00152_gene;locus_tag=GCA000144955_00152;gene=ybaN
contig_1	Pyrodigal	CDS	168714	169097	.	-	0	ID=GCA000144955_00152;Name=DUF454 domain-containing protein;locus_tag=GCA000144955_00152;product=DUF454 domain-containing protein;gene=ybaN;Parent=GCA000144955_00152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_001237002.1,SO:0001217,UniParc:UPI00000D9BD0,UniRef:UniRef100_A0A641A827,UniRef:UniRef50_Q2G1J1,UniRef:UniRef90_Q2G1J1
contig_1	Pyrodigal	gene	169524	171011	.	+	.	ID=GCA000144955_00153_gene;locus_tag=GCA000144955_00153;gene=aldA
contig_1	Pyrodigal	CDS	169524	171011	.	+	0	ID=GCA000144955_00153;Name=Putative aldehyde dehydrogenase AldA;locus_tag=GCA000144955_00153;product=Putative aldehyde dehydrogenase AldA;Dbxref=GO:0004029;gene=aldA;Parent=GCA000144955_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000290388.1,SO:0001217,UniParc:UPI0001C339B7,UniRef:UniRef100_A0A0D1HIV5,UniRef:UniRef50_Q2G1J0,UniRef:UniRef90_Q2G1J0;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	171658	172617	.	+	.	ID=GCA000144955_00154_gene;locus_tag=GCA000144955_00154;gene=czcD
contig_1	Pyrodigal	CDS	171658	172617	.	+	0	ID=GCA000144955_00154;Name=Cation transporter;locus_tag=GCA000144955_00154;product=Cation transporter;gene=czcD;Parent=GCA000144955_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1230,COG:P,RefSeq:WP_001013481.1,SO:0001217,UniParc:UPI00000D9BD1,UniRef:UniRef100_A0A641A803,UniRef:UniRef50_Q2G1I9,UniRef:UniRef90_Q2G1I9
contig_1	Pyrodigal	gene	172676	172879	.	-	.	ID=GCA000144955_00155_gene;locus_tag=GCA000144955_00155
contig_1	Pyrodigal	CDS	172676	172879	.	-	0	ID=GCA000144955_00155;Name=hypothetical protein;locus_tag=GCA000144955_00155;product=hypothetical protein;Parent=GCA000144955_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356965.1,SO:0001217,UniParc:UPI0001DD9D46,UniRef:UniRef100_UPI0001DD9D46,UniRef:UniRef50_Q2G1I8,UniRef:UniRef90_Q2G1I8
contig_1	Pyrodigal	gene	173058	173570	.	+	.	ID=GCA000144955_00156_gene;locus_tag=GCA000144955_00156
contig_1	Pyrodigal	CDS	173058	173570	.	+	0	ID=GCA000144955_00156;Name=DUF4242 domain-containing protein;locus_tag=GCA000144955_00156;product=DUF4242 domain-containing protein;Parent=GCA000144955_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171926.1,SO:0001217,UniParc:UPI00003B1340,UniRef:UniRef100_A0A7Z7W0G0,UniRef:UniRef50_A0A0A8JHF4,UniRef:UniRef90_Q2G1I7
contig_1	Pyrodigal	gene	173912	174652	.	+	.	ID=GCA000144955_00157_gene;locus_tag=GCA000144955_00157;gene=tauB
contig_1	Pyrodigal	CDS	173912	174652	.	+	0	ID=GCA000144955_00157;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_00157;product=ABC transporter ATP-binding protein;gene=tauB;Parent=GCA000144955_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1116,COG:P,RefSeq:WP_000590857.1,SO:0001217,UniParc:UPI0001DD9D47,UniRef:UniRef100_UPI0001DD9D47,UniRef:UniRef50_A0A0U1MVC7,UniRef:UniRef90_A0A0U1MVC7
contig_1	Pyrodigal	gene	174666	175652	.	+	.	ID=GCA000144955_00158_gene;locus_tag=GCA000144955_00158;gene=tauA
contig_1	Pyrodigal	CDS	174666	175652	.	+	0	ID=GCA000144955_00158;Name=ABC transporter substrate-binding protein;locus_tag=GCA000144955_00158;product=ABC transporter substrate-binding protein;gene=tauA;Parent=GCA000144955_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0715,COG:P,RefSeq:WP_000826663.1,SO:0001217,UniParc:UPI0001DD9D48,UniRef:UniRef100_UPI0001DD9D48,UniRef:UniRef50_A0A380C0S7,UniRef:UniRef90_Q2G1I5
contig_1	Pyrodigal	gene	175649	176410	.	+	.	ID=GCA000144955_00159_gene;locus_tag=GCA000144955_00159;gene=tauC
contig_1	Pyrodigal	CDS	175649	176410	.	+	0	ID=GCA000144955_00159;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000144955_00159;product=ABC transmembrane type-1 domain-containing protein;gene=tauC;Parent=GCA000144955_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,RefSeq:WP_000197557.1,SO:0001217,UniParc:UPI0001DD9D49,UniRef:UniRef100_UPI0001DD9D49,UniRef:UniRef50_Q2G1I4,UniRef:UniRef90_Q2G1I4
contig_1	Pyrodigal	gene	176420	177454	.	+	.	ID=GCA000144955_00160_gene;locus_tag=GCA000144955_00160;gene=caiA
contig_1	Pyrodigal	CDS	176420	177454	.	+	0	ID=GCA000144955_00160;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000144955_00160;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000144955_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,SO:0001217,UniRef:UniRef50_A0A0E1XC01,UniRef:UniRef90_A0A0E1XC01
contig_1	Pyrodigal	gene	177812	179050	.	+	.	ID=GCA000144955_00161_gene;locus_tag=GCA000144955_00161
contig_1	Pyrodigal	CDS	177812	179050	.	+	0	ID=GCA000144955_00161;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_00161;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000144955_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08152,SO:0001217,UniRef:UniRef50_Q2G1I0,UniRef:UniRef90_Q2G1I0
contig_1	Pyrodigal	gene	179508	186683	.	+	.	ID=GCA000144955_00162_gene;locus_tag=GCA000144955_00162;gene=ausA
contig_1	Pyrodigal	CDS	179508	186683	.	+	0	ID=GCA000144955_00162;Name=aureusimine non-ribosomal peptide synthetase AusA;locus_tag=GCA000144955_00162;product=aureusimine non-ribosomal peptide synthetase AusA;gene=ausA;Parent=GCA000144955_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3320,COG:Q,RefSeq:WP_000605276.1,SO:0001217,UniParc:UPI0005C44E51,UniRef:UniRef100_UPI0005C44E51,UniRef:UniRef50_A0A4U9TAP6,UniRef:UniRef90_A0AAE2ZS18
contig_1	Pyrodigal	gene	186696	187340	.	+	.	ID=GCA000144955_00163_gene;locus_tag=GCA000144955_00163;gene=ausB
contig_1	Pyrodigal	CDS	186696	187340	.	+	0	ID=GCA000144955_00163;Name=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;locus_tag=GCA000144955_00163;product=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;Dbxref=GO:0016780;gene=ausB;Parent=GCA000144955_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_000215727.1,SO:0001217,UniParc:UPI0001B3B1AC,UniRef:UniRef100_A0A5D3U159,UniRef:UniRef50_Q2G1H8,UniRef:UniRef90_Q2G1H8;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	187669	188163	.	-	.	ID=GCA000144955_00164_gene;locus_tag=GCA000144955_00164;gene=yagU
contig_1	Pyrodigal	CDS	187669	188163	.	-	0	ID=GCA000144955_00164;Name=DUF1440 domain-containing protein;locus_tag=GCA000144955_00164;product=DUF1440 domain-containing protein;gene=yagU;Parent=GCA000144955_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3477,COG:S,KEGG:K08996,SO:0001217,UniParc:UPI0001DD9D4D,UniRef:UniRef100_A0A380DHP4,UniRef:UniRef50_Q2G1H7,UniRef:UniRef90_Q2G1H7
contig_1	Pyrodigal	gene	188434	189204	.	-	.	ID=GCA000144955_00165_gene;locus_tag=GCA000144955_00165;gene=argB
contig_1	Pyrodigal	CDS	188434	189204	.	-	0	ID=GCA000144955_00165;Name=Acetylglutamate kinase;locus_tag=GCA000144955_00165;product=Acetylglutamate kinase;Dbxref=GO:0003991,GO:0005524,GO:0005737,GO:0006526,GO:0042450;gene=argB;Parent=GCA000144955_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0548,COG:E,RefSeq:WP_000668893.1,SO:0001217,UniParc:UPI0001DD9EDA,UniRef:UniRef100_UPI0001DD9EDA,UniRef:UniRef50_Q2G1H6,UniRef:UniRef90_Q2G1H6;ec_number=2.7.2.8
contig_1	Pyrodigal	gene	189220	190461	.	-	.	ID=GCA000144955_00166_gene;locus_tag=GCA000144955_00166;gene=argJ
contig_1	Pyrodigal	CDS	189220	190461	.	-	0	ID=GCA000144955_00166;Name=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;locus_tag=GCA000144955_00166;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;Dbxref=GO:0004042,GO:0004358,GO:0005737,GO:0006526,GO:0006592;gene=argJ;Parent=GCA000144955_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1364,COG:E,KEGG:K00620,RefSeq:WP_000682617.1,SO:0001217,UniParc:UPI0001DD9EDB,UniRef:UniRef100_UPI0001DD9EDB,UniRef:UniRef50_P63575,UniRef:UniRef90_P63575;ec_number=2.3.1.35
contig_1	Pyrodigal	gene	190473	191507	.	-	.	ID=GCA000144955_00167_gene;locus_tag=GCA000144955_00167;gene=argC
contig_1	Pyrodigal	CDS	190473	191507	.	-	0	ID=GCA000144955_00167;Name=N-acetyl-gamma-glutamyl-phosphate reductase;locus_tag=GCA000144955_00167;product=N-acetyl-gamma-glutamyl-phosphate reductase;Dbxref=GO:0003942,GO:0005737,GO:0006526,GO:0006592,GO:0051287,GO:0070401;gene=argC;Parent=GCA000144955_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0002,COG:E,SO:0001217,UniRef:UniRef50_Q6GKC2,UniRef:UniRef90_Q6GKC2;ec_number=1.2.1.38
contig_1	Infernal	gene	191065	191256	.	+	.	ID=GCA000144955_00168_gene;locus_tag=GCA000144955_00168;gene=sau-53
contig_1	Infernal	ncRNA	191065	191256	2.6e-35	+	.	ID=GCA000144955_00168;Name=Staphylococcus sRNA sau-53;locus_tag=GCA000144955_00168;product=Staphylococcus sRNA sau-53;Dbxref=RFAM:RF02392;Parent=GCA000144955_00168_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02392
contig_1	Pyrodigal	gene	191543	192727	.	-	.	ID=GCA000144955_00169_gene;locus_tag=GCA000144955_00169;gene=rocD
contig_1	Pyrodigal	CDS	191543	192727	.	-	0	ID=GCA000144955_00169;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000144955_00169;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0006526,GO:0030170,GO:0042802,GO:0055129;gene=rocD;Parent=GCA000144955_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,KEGG:K00819,RefSeq:WP_001084452.1,SO:0001217,UniParc:UPI0001DD9EDD,UniRef:UniRef100_UPI0001DD9EDD,UniRef:UniRef50_P60295,UniRef:UniRef90_P60295;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	192976	194331	.	-	.	ID=GCA000144955_00170_gene;locus_tag=GCA000144955_00170;gene=brnQ
contig_1	Pyrodigal	CDS	192976	194331	.	-	0	ID=GCA000144955_00170;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000144955_00170;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000144955_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_000728181.1,SO:0001217,UniParc:UPI0001DD9EDE,UniRef:UniRef100_UPI0001DD9EDE,UniRef:UniRef50_A0A133CF62,UniRef:UniRef90_A0A380EB78
contig_1	Pyrodigal	gene	194610	195107	.	-	.	ID=GCA000144955_00171_gene;locus_tag=GCA000144955_00171
contig_1	Pyrodigal	CDS	194610	195107	.	-	0	ID=GCA000144955_00171;Name=Putative isochorismatase;locus_tag=GCA000144955_00171;product=Putative isochorismatase;Parent=GCA000144955_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G1H1,UniRef:UniRef90_A0A077UII8
contig_1	Pyrodigal	gene	195232	196872	.	-	.	ID=GCA000144955_00172_gene;locus_tag=GCA000144955_00172;gene=pDC1
contig_1	Pyrodigal	CDS	195232	196872	.	-	0	ID=GCA000144955_00172;Name=Alpha-keto acid decarboxylase family protein;locus_tag=GCA000144955_00172;product=Alpha-keto acid decarboxylase family protein;gene=pDC1;Parent=GCA000144955_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3961,COG:GHR,KEGG:K27601,RefSeq:WP_000813550.1,SO:0001217,UniParc:UPI0001DD9EE0,UniRef:UniRef100_UPI0001DD9EE0,UniRef:UniRef50_A0A239YDI9,UniRef:UniRef90_A0A0Y9AAE9;ec_number=4.1.1.72
contig_1	Pyrodigal	gene	197142	199187	.	-	.	ID=GCA000144955_00173_gene;locus_tag=GCA000144955_00173;gene=ptsG
contig_1	Pyrodigal	CDS	197142	199187	.	-	0	ID=GCA000144955_00173;Name=PTS system glucose-specific EIICBA component;locus_tag=GCA000144955_00173;product=PTS system glucose-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=ptsG;Parent=GCA000144955_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_001227729.1,SO:0001217,UniParc:UPI0001DD9EE2,UniRef:UniRef100_UPI0001DD9EE2,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2G1G8;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	199773	200828	.	+	.	ID=GCA000144955_00174_gene;locus_tag=GCA000144955_00174;gene=mupG
contig_1	Pyrodigal	CDS	199773	200828	.	+	0	ID=GCA000144955_00174;Name=6-phospho-N-acetylmuramidase;locus_tag=GCA000144955_00174;product=6-phospho-N-acetylmuramidase;Dbxref=GO:0005737,GO:0009254,GO:0016798;gene=mupG;Parent=GCA000144955_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3589,COG:M,KEGG:K09963,RefSeq:WP_000145570.1,SO:0001217,UniParc:UPI0001DD9EE3,UniRef:UniRef100_A0A5S9ET49,UniRef:UniRef50_A0A0H2XHV5,UniRef:UniRef90_A0A0H2XHV5;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	200828	201724	.	+	.	ID=GCA000144955_00175_gene;locus_tag=GCA000144955_00175;gene=murQ
contig_1	Pyrodigal	CDS	200828	201724	.	+	0	ID=GCA000144955_00175;Name=N-acetylmuramic acid 6-phosphate etherase;locus_tag=GCA000144955_00175;product=N-acetylmuramic acid 6-phosphate etherase;Dbxref=GO:0009254,GO:0016803,GO:0016835,GO:0046348,GO:0097173,GO:0097367;gene=murQ;Parent=GCA000144955_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2103,COG:M,KEGG:K07106,RefSeq:WP_000432014.1,SO:0001217,UniParc:UPI0001DD9EE4,UniRef:UniRef100_UPI0001DD9EE4,UniRef:UniRef50_Q2G1G6,UniRef:UniRef90_Q2G1G6;ec_number=4.2.1.126
contig_1	Pyrodigal	gene	201736	203190	.	+	.	ID=GCA000144955_00176_gene;locus_tag=GCA000144955_00176;gene=murP
contig_1	Pyrodigal	CDS	201736	203190	.	+	0	ID=GCA000144955_00176;Name=PTS system MurNAc-GlcNAc-specific EIIBC component;locus_tag=GCA000144955_00176;product=PTS system MurNAc-GlcNAc-specific EIIBC component;Dbxref=GO:0005886,GO:0008982,GO:0009254,GO:0009401,GO:0016301,GO:0090588;gene=murP;Parent=GCA000144955_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000159758.1,SO:0001217,UniParc:UPI0001DD9EE5,UniRef:UniRef100_UPI0001DD9EE5,UniRef:UniRef50_Q4L8H5,UniRef:UniRef90_Q2G1G5
contig_1	Pyrodigal	gene	203190	204068	.	+	.	ID=GCA000144955_00177_gene;locus_tag=GCA000144955_00177;gene=rpiR
contig_1	Pyrodigal	CDS	203190	204068	.	+	0	ID=GCA000144955_00177;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000144955_00177;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000144955_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,SO:0001217,UniParc:UPI00000546BD,UniRef:UniRef100_Q2G1G4,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2G1G4
contig_1	Pyrodigal	gene	204262	204543	.	-	.	ID=GCA000144955_00178_gene;locus_tag=GCA000144955_00178
contig_1	Pyrodigal	CDS	204262	204543	.	-	0	ID=GCA000144955_00178;Name=hypothetical protein;locus_tag=GCA000144955_00178;product=hypothetical protein;Parent=GCA000144955_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044025856.1,SO:0001217,UniParc:UPI0002E8C7A9,UniRef:UniRef100_UPI0002E8C7A9,UniRef:UniRef50_Q2G1G3,UniRef:UniRef90_Q2G1G3
contig_1	Pyrodigal	gene	204756	207545	.	+	.	ID=GCA000144955_00179_gene;locus_tag=GCA000144955_00179
contig_1	Pyrodigal	CDS	204756	207545	.	+	0	ID=GCA000144955_00179;Name=Type I restriction enzyme endonuclease subunit;locus_tag=GCA000144955_00179;product=Type I restriction enzyme endonuclease subunit;Parent=GCA000144955_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000331336.1,SO:0001217,UniParc:UPI0001DD9EE6,UniRef:UniRef100_UPI0001DD9EE6,UniRef:UniRef50_Q4A127,UniRef:UniRef90_A0A077UIK0
contig_1	Pyrodigal	gene	207750	208592	.	+	.	ID=GCA000144955_00180_gene;locus_tag=GCA000144955_00180
contig_1	Pyrodigal	CDS	207750	208592	.	+	0	ID=GCA000144955_00180;Name=Sce7726 family protein;locus_tag=GCA000144955_00180;product=Sce7726 family protein;Parent=GCA000144955_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000370346.1,SO:0001217,UniParc:UPI0001DD9EE7,UniRef:UniRef100_UPI0001DD9EE7,UniRef:UniRef50_Q2G1G1,UniRef:UniRef90_Q2G1G1
contig_1	Pyrodigal	gene	208594	209517	.	+	.	ID=GCA000144955_00181_gene;locus_tag=GCA000144955_00181
contig_1	Pyrodigal	CDS	208594	209517	.	+	0	ID=GCA000144955_00181;Name=Sce7725 family protein;locus_tag=GCA000144955_00181;product=Sce7725 family protein;Parent=GCA000144955_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291763.1,SO:0001217,UniParc:UPI0001DD9EE8,UniRef:UniRef100_UPI0001DD9EE8,UniRef:UniRef50_Q2G1G0,UniRef:UniRef90_Q2G1G0
contig_1	Pyrodigal	gene	209504	210616	.	+	.	ID=GCA000144955_00182_gene;locus_tag=GCA000144955_00182
contig_1	Pyrodigal	CDS	209504	210616	.	+	0	ID=GCA000144955_00182;Name=RES domain-containing protein;locus_tag=GCA000144955_00182;product=RES domain-containing protein;Parent=GCA000144955_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000686455.1,SO:0001217,UniParc:UPI0001DD9EE9,UniRef:UniRef100_UPI0001DD9EE9,UniRef:UniRef50_Q2G1F9,UniRef:UniRef90_Q2G1F9
contig_1	Pyrodigal	gene	210880	212472	.	-	.	ID=GCA000144955_00183_gene;locus_tag=GCA000144955_00183;gene=cntF
contig_1	Pyrodigal	CDS	210880	212472	.	-	0	ID=GCA000144955_00183;Name=staphylopine uptake ABC transporter ATP-binding protein CntF;locus_tag=GCA000144955_00183;product=staphylopine uptake ABC transporter ATP-binding protein CntF;gene=cntF;Parent=GCA000144955_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4172,COG:Q,RefSeq:WP_000067344.1,SO:0001217,UniParc:UPI0001DD9EEA,UniRef:UniRef100_UPI0001DD9EEA,UniRef:UniRef50_A0A0Y9RYS1,UniRef:UniRef90_A0A0Y9RYS1
contig_1	Pyrodigal	gene	212474	213907	.	+	.	ID=GCA000144955_00184_gene;locus_tag=GCA000144955_00184;gene=dppB
contig_1	Pyrodigal	CDS	212474	213907	.	+	0	ID=GCA000144955_00184;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000144955_00184;product=ABC transmembrane type-1 domain-containing protein;gene=dppB;Parent=GCA000144955_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,SO:0001217,UniRef:UniRef50_Q2G1F7,UniRef:UniRef90_Q2G1F7
contig_1	Pyrodigal	gene	213913	215076	.	+	.	ID=GCA000144955_00185_gene;locus_tag=GCA000144955_00185;gene=dppC
contig_1	Pyrodigal	CDS	213913	215076	.	+	0	ID=GCA000144955_00185;Name=ABC transporter permease;locus_tag=GCA000144955_00185;product=ABC transporter permease;gene=dppC;Parent=GCA000144955_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000240112.1,SO:0001217,UniParc:UPI0001DD9EEC,UniRef:UniRef100_UPI0001DD9EEC,UniRef:UniRef50_A0A0D0SFB5,UniRef:UniRef90_A0A390VWI1
contig_1	Pyrodigal	gene	215093	216868	.	+	.	ID=GCA000144955_00186_gene;locus_tag=GCA000144955_00186;gene=oppA
contig_1	Pyrodigal	CDS	215093	216868	.	+	0	ID=GCA000144955_00186;Name=Solute-binding protein family 5 domain-containing protein;locus_tag=GCA000144955_00186;product=Solute-binding protein family 5 domain-containing protein;gene=oppA;Parent=GCA000144955_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_000720826.1,SO:0001217,UniParc:UPI0001DD9EED,UniRef:UniRef100_UPI0001DD9EED,UniRef:UniRef50_Q2G1F5,UniRef:UniRef90_Q2G1F5
contig_1	Pyrodigal	gene	216906	218912	.	+	.	ID=GCA000144955_00187_gene;locus_tag=GCA000144955_00187;gene=ggt
contig_1	Pyrodigal	CDS	216906	218912	.	+	0	ID=GCA000144955_00187;Name=gamma-glutamyltransferase;locus_tag=GCA000144955_00187;product=gamma-glutamyltransferase;Dbxref=GO:0006750,GO:0006751,GO:0036374;gene=ggt;Parent=GCA000144955_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0405,COG:E,RefSeq:WP_000236421.1,SO:0001217,UniParc:UPI0001DD9EEE,UniRef:UniRef100_UPI0001DD9EEE,UniRef:UniRef50_A0A151A3J0,UniRef:UniRef90_A0A0U1MVT3;ec_number=2.3.2.2
contig_1	Pyrodigal	gene	219210	219983	.	-	.	ID=GCA000144955_00188_gene;locus_tag=GCA000144955_00188
contig_1	Pyrodigal	CDS	219210	219983	.	-	0	ID=GCA000144955_00188;Name=putative protein SAUSA300_0205;locus_tag=GCA000144955_00188;product=putative protein SAUSA300_0205;Dbxref=GO:0005886;Parent=GCA000144955_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000649319.1,SO:0001217,UniParc:UPI0001DD9EEF,UniRef:UniRef100_UPI0001DD9EEF,UniRef:UniRef50_Q2G1F3,UniRef:UniRef90_Q2G1F3
contig_1	Pyrodigal	gene	220173	220799	.	-	.	ID=GCA000144955_00189_gene;locus_tag=GCA000144955_00189;gene=azoR
contig_1	Pyrodigal	CDS	220173	220799	.	-	0	ID=GCA000144955_00189;Name=FMN-dependent NADH:quinone oxidoreductase;locus_tag=GCA000144955_00189;product=FMN-dependent NADH:quinone oxidoreductase;Dbxref=GO:0009055,GO:0010181,GO:0016652,GO:0016655;gene=azoR;Parent=GCA000144955_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_001151461.1,SO:0001217,UniParc:UPI0001DD9EF0,UniRef:UniRef100_A0A0U1MXQ8,UniRef:UniRef50_O32224,UniRef:UniRef90_Q2YV20;ec_number=1.6.5.-
contig_1	Pyrodigal	gene	221008	221586	.	+	.	ID=GCA000144955_00190_gene;locus_tag=GCA000144955_00190
contig_1	Pyrodigal	CDS	221008	221586	.	+	0	ID=GCA000144955_00190;Name=lysostaphin;locus_tag=GCA000144955_00190;product=lysostaphin;Parent=GCA000144955_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000166909.1,SO:0001217,UniParc:UPI0001B3B22A,UniRef:UniRef100_A0AAW9XHB2,UniRef:UniRef50_A0AAP8TTY0,UniRef:UniRef90_A0A181EW64
contig_1	Pyrodigal	gene	221969	223066	.	+	.	ID=GCA000144955_00191_gene;locus_tag=GCA000144955_00191;gene=malK
contig_1	Pyrodigal	CDS	221969	223066	.	+	0	ID=GCA000144955_00191;Name=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000144955_00191;product=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=malK;Parent=GCA000144955_00191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3839,COG:G,RefSeq:WP_000818919.1,SO:0001217,UniParc:UPI0001DD9EF1,UniRef:UniRef100_UPI0001DD9EF1,UniRef:UniRef50_A0A3A3AX25,UniRef:UniRef90_A0A3A3AX25
contig_1	Pyrodigal	gene	223079	224350	.	+	.	ID=GCA000144955_00192_gene;locus_tag=GCA000144955_00192;gene=malE
contig_1	Pyrodigal	CDS	223079	224350	.	+	0	ID=GCA000144955_00192;Name=Maltodextrin-binding protein;locus_tag=GCA000144955_00192;product=Maltodextrin-binding protein;gene=malE;Parent=GCA000144955_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2182,COG:G,RefSeq:WP_000034972.1,SO:0001217,UniParc:UPI0001DD9EF2,UniRef:UniRef100_UPI0001DD9EF2,UniRef:UniRef50_A0A380G462,UniRef:UniRef90_Q2G1E9
contig_1	Pyrodigal	gene	224353	225621	.	+	.	ID=GCA000144955_00193_gene;locus_tag=GCA000144955_00193;gene=ugpA
contig_1	Pyrodigal	CDS	224353	225621	.	+	0	ID=GCA000144955_00193;Name=Maltose/maltodextrin transport system permease protein;locus_tag=GCA000144955_00193;product=Maltose/maltodextrin transport system permease protein;gene=ugpA;Parent=GCA000144955_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1175,COG:G,RefSeq:WP_000166892.1,SO:0001217,UniParc:UPI00000CAA11,UniRef:UniRef100_A0A0C2H8L9,UniRef:UniRef50_A0A0C2H8L9,UniRef:UniRef90_A0A0C2H8L9
contig_1	Pyrodigal	gene	225623	226462	.	+	.	ID=GCA000144955_00194_gene;locus_tag=GCA000144955_00194;gene=malG
contig_1	Pyrodigal	CDS	225623	226462	.	+	0	ID=GCA000144955_00194;Name=Maltose ABC transporter%2C permease protein;locus_tag=GCA000144955_00194;product=Maltose ABC transporter%2C permease protein;gene=malG;Parent=GCA000144955_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3833,COG:G,RefSeq:WP_000162661.1,SO:0001217,UniParc:UPI0000052279,UniRef:UniRef100_Q2G1E7,UniRef:UniRef50_H3NDB5,UniRef:UniRef90_Q2G1E7
contig_1	Pyrodigal	gene	226536	227612	.	+	.	ID=GCA000144955_00195_gene;locus_tag=GCA000144955_00195;gene=mviM
contig_1	Pyrodigal	CDS	226536	227612	.	+	0	ID=GCA000144955_00195;Name=NADH-dependent dehydrogenase;locus_tag=GCA000144955_00195;product=NADH-dependent dehydrogenase;gene=mviM;Parent=GCA000144955_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000153462.1,SO:0001217,UniParc:UPI0001DD9EF3,UniRef:UniRef100_UPI0001DD9EF3,UniRef:UniRef50_A0A660A233,UniRef:UniRef90_A0A660A233
contig_1	Pyrodigal	gene	227637	228677	.	+	.	ID=GCA000144955_00196_gene;locus_tag=GCA000144955_00196;gene=mviM
contig_1	Pyrodigal	CDS	227637	228677	.	+	0	ID=GCA000144955_00196;Name=Gfo/Idh/MocA family oxidoreductase;locus_tag=GCA000144955_00196;product=Gfo/Idh/MocA family oxidoreductase;gene=mviM;Parent=GCA000144955_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000163806.1,SO:0001217,UniParc:UPI0001DD9EF4,UniRef:UniRef100_UPI0001DD9EF4,UniRef:UniRef50_A0A2Y2IEY6,UniRef:UniRef90_A0A2Y2IEY6
contig_1	Pyrodigal	gene	228732	229700	.	+	.	ID=GCA000144955_00197_gene;locus_tag=GCA000144955_00197;gene=ycjR
contig_1	Pyrodigal	CDS	228732	229700	.	+	0	ID=GCA000144955_00197;Name=Xylose isomerase-like TIM barrel domain-containing protein;locus_tag=GCA000144955_00197;product=Xylose isomerase-like TIM barrel domain-containing protein;gene=ycjR;Parent=GCA000144955_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,RefSeq:WP_000766048.1,SO:0001217,UniParc:UPI0001DDA062,UniRef:UniRef100_A0A2S6D7B3,UniRef:UniRef50_K8EEE9,UniRef:UniRef90_Q2G1E4
contig_1	Pyrodigal	gene	230059	230553	.	-	.	ID=GCA000144955_00198_gene;locus_tag=GCA000144955_00198;gene=ypbQ
contig_1	Pyrodigal	CDS	230059	230553	.	-	0	ID=GCA000144955_00198;Name=Isoprenylcysteine carboxyl methyltransferase family protein;locus_tag=GCA000144955_00198;product=Isoprenylcysteine carboxyl methyltransferase family protein;gene=ypbQ;Parent=GCA000144955_00198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1755,COG:S,RefSeq:WP_000603755.1,SO:0001217,UniParc:UPI00000D7830,UniRef:UniRef100_Q2G1E3,UniRef:UniRef50_Q2G1E3,UniRef:UniRef90_Q2G1E3
contig_1	Pyrodigal	gene	230786	232165	.	+	.	ID=GCA000144955_00199_gene;locus_tag=GCA000144955_00199;gene=uhpT
contig_1	Pyrodigal	CDS	230786	232165	.	+	0	ID=GCA000144955_00199;Name=hexose phosphate transporter UhpT;locus_tag=GCA000144955_00199;product=hexose phosphate transporter UhpT;Dbxref=GO:0022857,GO:0055085;gene=uhpT;Parent=GCA000144955_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K07784,RefSeq:WP_001008722.1,SO:0001217,UniParc:UPI00000D772F,UniRef:UniRef100_Q2G1E2,UniRef:UniRef50_A0A9D7FSA6,UniRef:UniRef90_Q2G1E2
contig_1	Pyrodigal	gene	232524	233282	.	-	.	ID=GCA000144955_00200_gene;locus_tag=GCA000144955_00200;gene=hptR
contig_1	Pyrodigal	CDS	232524	233282	.	-	0	ID=GCA000144955_00200;Name=Transcriptional regulatory protein HptR;locus_tag=GCA000144955_00200;product=Transcriptional regulatory protein HptR;Dbxref=GO:0000160,GO:0003700,GO:0005737,GO:0043565;gene=hptR;Parent=GCA000144955_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4753,COG:TK,KEGG:K07720,RefSeq:WP_000477521.1,SO:0001217,UniParc:UPI00000546A7,UniRef:UniRef100_Q2G1E1,UniRef:UniRef50_Q2G1E1,UniRef:UniRef90_Q2G1E1
contig_1	Pyrodigal	gene	233275	234831	.	-	.	ID=GCA000144955_00201_gene;locus_tag=GCA000144955_00201;gene=hptS
contig_1	Pyrodigal	CDS	233275	234831	.	-	0	ID=GCA000144955_00201;Name=Sensor protein kinase HptS;locus_tag=GCA000144955_00201;product=Sensor protein kinase HptS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hptS;Parent=GCA000144955_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2972,COG:T,KEGG:K25212,RefSeq:WP_000127986.1,SO:0001217,UniParc:UPI0001DDA063,UniRef:UniRef100_UPI0001DDA063,UniRef:UniRef50_Q2G1E0,UniRef:UniRef90_Q2G1E0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	234828	235796	.	-	.	ID=GCA000144955_00202_gene;locus_tag=GCA000144955_00202;gene=afuA
contig_1	Pyrodigal	CDS	234828	235796	.	-	0	ID=GCA000144955_00202;Name=Lipoprotein%2C putative;locus_tag=GCA000144955_00202;product=Lipoprotein%2C putative;gene=afuA;Parent=GCA000144955_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K25211,RefSeq:WP_000837103.1,SO:0001217,UniParc:UPI0001AE98F4,UniRef:UniRef100_A0A0G3D1I8,UniRef:UniRef50_S2XG35,UniRef:UniRef90_Q2G1D9
contig_1	Pyrodigal	gene	236384	238633	.	+	.	ID=GCA000144955_00203_gene;locus_tag=GCA000144955_00203;gene=pflB
contig_1	Pyrodigal	CDS	236384	238633	.	+	0	ID=GCA000144955_00203;Name=formate C-acetyltransferase;locus_tag=GCA000144955_00203;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006006,GO:0008861;gene=pflB;Parent=GCA000144955_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_000894660.1,SO:0001217,UniParc:UPI00000D789B,UniRef:UniRef100_Q2G1D8,UniRef:UniRef50_Q2G1D8,UniRef:UniRef90_Q2G1D8;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	238656	239411	.	+	.	ID=GCA000144955_00204_gene;locus_tag=GCA000144955_00204;gene=pflA
contig_1	Pyrodigal	CDS	238656	239411	.	+	0	ID=GCA000144955_00204;Name=pyruvate formate-lyase-activating protein;locus_tag=GCA000144955_00204;product=pyruvate formate-lyase-activating protein;Dbxref=GO:0005737,GO:0006006,GO:0043365,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000144955_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_000911657.1,SO:0001217,UniParc:UPI00000546A2,UniRef:UniRef100_Q2G1D7,UniRef:UniRef50_P0A442,UniRef:UniRef90_Q2G1D7;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	239532	239627	.	+	.	ID=GCA000144955_00205_gene;locus_tag=GCA000144955_00205;pseudogene=unitary
contig_1	Pyrodigal	CDS	239532	239627	.	+	0	ID=GCA000144955_00205;Name=hypothetical protein;locus_tag=GCA000144955_00205;product=hypothetical protein;pseudogene=unitary;Parent=GCA000144955_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X2JYE3,UniRef:UniRef90_A0A2X2JYE3
contig_1	Pyrodigal	gene	239732	241495	.	+	.	ID=GCA000144955_00206_gene;locus_tag=GCA000144955_00206;gene=ugpQ1
contig_1	Pyrodigal	CDS	239732	241495	.	+	0	ID=GCA000144955_00206;Name=GP-PDE domain-containing protein;locus_tag=GCA000144955_00206;product=GP-PDE domain-containing protein;gene=ugpQ1;Parent=GCA000144955_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4781,COG:I,KEGG:K01126,RefSeq:WP_000822602.1,SO:0001217,UniParc:UPI0001DDA064,UniRef:UniRef100_UPI0001DDA064,UniRef:UniRef50_Q2G1D5,UniRef:UniRef90_Q2G1D5;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	241659	242003	.	-	.	ID=GCA000144955_00207_gene;locus_tag=GCA000144955_00207
contig_1	Pyrodigal	CDS	241659	242003	.	-	0	ID=GCA000144955_00207;Name=Staphylococcal complement inhibitor;locus_tag=GCA000144955_00207;product=Staphylococcal complement inhibitor;Parent=GCA000144955_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14199,RefSeq:WP_000211608.1,SO:0001217,UniParc:UPI0001DDA065,UniRef:UniRef100_UPI0001DDA065,UniRef:UniRef50_Q4W8K4,UniRef:UniRef90_Q4W8K4
contig_1	Pyrodigal	gene	242193	244169	.	+	.	ID=GCA000144955_00208_gene;locus_tag=GCA000144955_00208;gene=coa
contig_1	Pyrodigal	CDS	242193	244169	.	+	0	ID=GCA000144955_00208;Name=staphylocoagulase;locus_tag=GCA000144955_00208;product=staphylocoagulase;Dbxref=GO:0016504;gene=coa;Parent=GCA000144955_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000744105.1,SO:0001217,UniParc:UPI0001DDA066,UniRef:UniRef100_UPI0001DDA066,UniRef:UniRef50_P07767,UniRef:UniRef90_P07767
contig_1	Pyrodigal	gene	244756	245940	.	-	.	ID=GCA000144955_00209_gene;locus_tag=GCA000144955_00209;gene=paaJ
contig_1	Pyrodigal	CDS	244756	245940	.	-	0	ID=GCA000144955_00209;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000144955_00209;product=putative acetyl-CoA acyltransferase;gene=paaJ;Parent=GCA000144955_00209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001154634.1,SO:0001217,UniParc:UPI0001DDA067,UniRef:UniRef100_UPI0001DDA067,UniRef:UniRef50_O32177,UniRef:UniRef90_Q2G1D0
contig_1	Pyrodigal	gene	245970	248231	.	-	.	ID=GCA000144955_00210_gene;locus_tag=GCA000144955_00210;gene=fadB
contig_1	Pyrodigal	CDS	245970	248231	.	-	0	ID=GCA000144955_00210;Name=enoyl-CoA hydratase;locus_tag=GCA000144955_00210;product=enoyl-CoA hydratase;gene=fadB;Parent=GCA000144955_00210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1250,COG:I,RefSeq:WP_000154499.1,SO:0001217,UniParc:UPI0001DDA068,UniRef:UniRef100_UPI0001DDA068,UniRef:UniRef50_Q2G1C9,UniRef:UniRef90_Q2G1C9
contig_1	Pyrodigal	gene	248417	249628	.	-	.	ID=GCA000144955_00211_gene;locus_tag=GCA000144955_00211;gene=caiA
contig_1	Pyrodigal	CDS	248417	249628	.	-	0	ID=GCA000144955_00211;Name=Glutaryl-CoA dehydrogenase;locus_tag=GCA000144955_00211;product=Glutaryl-CoA dehydrogenase;gene=caiA;Parent=GCA000144955_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000142184.1,SO:0001217,UniParc:UPI0001DDA069,UniRef:UniRef100_UPI0001DDA069,UniRef:UniRef50_A0A2S6D7L1,UniRef:UniRef90_A0A2S6D7L1
contig_1	Pyrodigal	gene	249740	251245	.	-	.	ID=GCA000144955_00212_gene;locus_tag=GCA000144955_00212;gene=menE
contig_1	Pyrodigal	CDS	249740	251245	.	-	0	ID=GCA000144955_00212;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000144955_00212;product=Putative long chain fatty acid-CoA ligase VraA;gene=menE;Parent=GCA000144955_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001008386.1,SO:0001217,UniParc:UPI0001DDA06A,UniRef:UniRef100_UPI0001DDA06A,UniRef:UniRef50_A0AAP7IER6,UniRef:UniRef90_A0A390WIJ0
contig_1	Pyrodigal	gene	251271	252833	.	-	.	ID=GCA000144955_00213_gene;locus_tag=GCA000144955_00213;gene=ydiF
contig_1	Pyrodigal	CDS	251271	252833	.	-	0	ID=GCA000144955_00213;Name=Acetyl-CoA/acetoacetyl-CoA transferase;locus_tag=GCA000144955_00213;product=Acetyl-CoA/acetoacetyl-CoA transferase;gene=ydiF;Parent=GCA000144955_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4670,COG:I,SO:0001217,UniRef:UniRef50_A0A9N8IHE7,UniRef:UniRef90_A0A9N8IHE7
contig_1	Pyrodigal	gene	253202	254431	.	+	.	ID=GCA000144955_00214_gene;locus_tag=GCA000144955_00214;gene=prsW
contig_1	Pyrodigal	CDS	253202	254431	.	+	0	ID=GCA000144955_00214;Name=Protease PrsW;locus_tag=GCA000144955_00214;product=Protease PrsW;gene=prsW;Parent=GCA000144955_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2339,COG:T,SO:0001217,UniRef:UniRef50_S2YE33,UniRef:UniRef90_A0A5S9C588
contig_1	Pyrodigal	gene	254560	255111	.	-	.	ID=GCA000144955_00215_gene;locus_tag=GCA000144955_00215;gene=tetR
contig_1	Pyrodigal	CDS	254560	255111	.	-	0	ID=GCA000144955_00215;Name=TetR family transcriptional regulator;locus_tag=GCA000144955_00215;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000144955_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000361247.1,SO:0001217,UniParc:UPI0001DDA06D,UniRef:UniRef100_UPI0001DDA06D,UniRef:UniRef50_A0A0U1MWC6,UniRef:UniRef90_A0A0U1MWC6
contig_1	Pyrodigal	gene	255265	255909	.	+	.	ID=GCA000144955_00216_gene;locus_tag=GCA000144955_00216
contig_1	Pyrodigal	CDS	255265	255909	.	+	0	ID=GCA000144955_00216;Name=NAD(P)H-binding protein;locus_tag=GCA000144955_00216;product=NAD(P)H-binding protein;Parent=GCA000144955_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000412501.1,SO:0001217,UniParc:UPI0001DDA06E,UniRef:UniRef100_UPI0001DDA06E,UniRef:UniRef50_N9QYH5,UniRef:UniRef90_A0A0U1MVW5
contig_1	Pyrodigal	gene	255922	256824	.	+	.	ID=GCA000144955_00217_gene;locus_tag=GCA000144955_00217
contig_1	Pyrodigal	CDS	255922	256824	.	+	0	ID=GCA000144955_00217;Name=Alpha/beta fold hydrolase;locus_tag=GCA000144955_00217;product=Alpha/beta fold hydrolase;Parent=GCA000144955_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000416913.1,SO:0001217,UniParc:UPI0001DDA06F,UniRef:UniRef100_UPI0001DDA06F,UniRef:UniRef50_A0A0U1MTY4,UniRef:UniRef90_A0A0U1MVT9
contig_1	Pyrodigal	gene	257226	258704	.	-	.	ID=GCA000144955_00218_gene;locus_tag=GCA000144955_00218;gene=nikA
contig_1	Pyrodigal	CDS	257226	258704	.	-	0	ID=GCA000144955_00218;Name=nickel ABC transporter substrate-binding protein;locus_tag=GCA000144955_00218;product=nickel ABC transporter substrate-binding protein;Dbxref=GO:0015675,GO:0015833,GO:0042597,GO:0043190,GO:0140359,GO:1904680;gene=nikA;Parent=GCA000144955_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000669700.1,SO:0001217,UniParc:UPI0001DDA070,UniRef:UniRef100_UPI0001DDA070,UniRef:UniRef50_Q2G2P5,UniRef:UniRef90_Q2G2P5
contig_1	Pyrodigal	gene	258902	259258	.	-	.	ID=GCA000144955_00219_gene;locus_tag=GCA000144955_00219
contig_1	Pyrodigal	CDS	258902	259258	.	-	0	ID=GCA000144955_00219;Name=Cytosolic protein;locus_tag=GCA000144955_00219;product=Cytosolic protein;Parent=GCA000144955_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000150972.1,SO:0001217,UniParc:UPI0001DDA071,UniRef:UniRef100_UPI0001DDA071,UniRef:UniRef50_Q4A0G8,UniRef:UniRef90_A0A7U7PXG9
contig_1	Pyrodigal	gene	259370	259543	.	-	.	ID=GCA000144955_00220_gene;locus_tag=GCA000144955_00220
contig_1	Pyrodigal	CDS	259370	259543	.	-	0	ID=GCA000144955_00220;Name=hypothetical protein;locus_tag=GCA000144955_00220;product=hypothetical protein;Parent=GCA000144955_00220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000773986.1,SO:0001217,UniParc:UPI0001DDA072,UniRef:UniRef100_UPI0001DDA072,UniRef:UniRef50_Q2G2P3,UniRef:UniRef90_Q2G2P3
contig_1	Pyrodigal	gene	259569	260714	.	-	.	ID=GCA000144955_00221_gene;locus_tag=GCA000144955_00221;gene=fpr
contig_1	Pyrodigal	CDS	259569	260714	.	-	0	ID=GCA000144955_00221;Name=nitric oxide dioxygenase;locus_tag=GCA000144955_00221;product=nitric oxide dioxygenase;gene=fpr;Parent=GCA000144955_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,KEGG:K05916,RefSeq:WP_000954813.1,SO:0001217,UniParc:UPI0001DDA073,UniRef:UniRef100_UPI0001DDA073,UniRef:UniRef50_Q2G2P2,UniRef:UniRef90_Q2G2P2;ec_number=1.14.12.17
contig_1	Pyrodigal	gene	261287	262240	.	+	.	ID=GCA000144955_00222_gene;locus_tag=GCA000144955_00222;gene=ldh1
contig_1	Pyrodigal	CDS	261287	262240	.	+	0	ID=GCA000144955_00222;Name=L-lactate dehydrogenase;locus_tag=GCA000144955_00222;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh1;Parent=GCA000144955_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_001031880.1,SO:0001217,UniParc:UPI000012E2D4,UniRef:UniRef100_P65255,UniRef:UniRef50_Q2G218,UniRef:UniRef90_Q2G218;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	262561	264090	.	-	.	ID=GCA000144955_00223_gene;locus_tag=GCA000144955_00223;gene=ptsG2
contig_1	Pyrodigal	CDS	262561	264090	.	-	0	ID=GCA000144955_00223;Name=PTS glucose transporter subunit IIB;locus_tag=GCA000144955_00223;product=PTS glucose transporter subunit IIB;gene=ptsG2;Parent=GCA000144955_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000838208.1,SO:0001217,UniParc:UPI0001DDA074,UniRef:UniRef100_UPI0001DDA074,UniRef:UniRef50_A0A0G9G6Y5,UniRef:UniRef90_A0A2S6D7K1
contig_1	Pyrodigal	gene	264453	265388	.	+	.	ID=GCA000144955_00224_gene;locus_tag=GCA000144955_00224;gene=uRH1
contig_1	Pyrodigal	CDS	264453	265388	.	+	0	ID=GCA000144955_00224;Name=Nucleoside hydrolase;locus_tag=GCA000144955_00224;product=Nucleoside hydrolase;gene=uRH1;Parent=GCA000144955_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000823224.1,SO:0001217,UniParc:UPI0001DDA075,UniRef:UniRef100_UPI0001DDA075,UniRef:UniRef50_A0A389XQD2,UniRef:UniRef90_A0A389XQD2
contig_1	Pyrodigal	gene	265733	267829	.	+	.	ID=GCA000144955_00225_gene;locus_tag=GCA000144955_00225;gene=bglG
contig_1	Pyrodigal	CDS	265733	267829	.	+	0	ID=GCA000144955_00225;Name=PTS system mannitol (Cryptic)-specific transporter subunit IIA;locus_tag=GCA000144955_00225;product=PTS system mannitol (Cryptic)-specific transporter subunit IIA;gene=bglG;Parent=GCA000144955_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_001012757.1,SO:0001217,UniParc:UPI0001DDA076,UniRef:UniRef100_UPI0001DDA076,UniRef:UniRef50_A0A0Z0QCU8,UniRef:UniRef90_A0A0Z0QCU8
contig_1	Pyrodigal	gene	267814	268281	.	+	.	ID=GCA000144955_00226_gene;locus_tag=GCA000144955_00226;gene=ptsN
contig_1	Pyrodigal	CDS	267814	268281	.	+	0	ID=GCA000144955_00226;Name=PTS sugar transporter subunit IIA;locus_tag=GCA000144955_00226;product=PTS sugar transporter subunit IIA;gene=ptsN;Parent=GCA000144955_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000531480.1,SO:0001217,UniParc:UPI0001DDA077,UniRef:UniRef100_UPI0001DDA077,UniRef:UniRef50_A0A380G592,UniRef:UniRef90_A0A2S6DBD2
contig_1	Pyrodigal	gene	268304	268582	.	+	.	ID=GCA000144955_00227_gene;locus_tag=GCA000144955_00227;gene=sgaB
contig_1	Pyrodigal	CDS	268304	268582	.	+	0	ID=GCA000144955_00227;Name=PTS system galactitol-specific transporter subunit IIB;locus_tag=GCA000144955_00227;product=PTS system galactitol-specific transporter subunit IIB;gene=sgaB;Parent=GCA000144955_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000815795.1,SO:0001217,UniParc:UPI00000D765E,UniRef:UniRef100_Q2G2B6,UniRef:UniRef50_Q9KGB5,UniRef:UniRef90_A0A239YB06
contig_1	Pyrodigal	gene	268809	270068	.	+	.	ID=GCA000144955_00228_gene;locus_tag=GCA000144955_00228;gene=sgcC
contig_1	Pyrodigal	CDS	268809	270068	.	+	0	ID=GCA000144955_00228;Name=PTS galactitol transporter subunit IIC;locus_tag=GCA000144955_00228;product=PTS galactitol transporter subunit IIC;gene=sgcC;Parent=GCA000144955_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3775,COG:G,KEGG:K02775,RefSeq:WP_000120115.1,SO:0001217,UniParc:UPI00003B1378,UniRef:UniRef100_A0A7Z7W0I4,UniRef:UniRef50_A0A2Y1NYM9,UniRef:UniRef90_A0A2Y1NYM9
contig_1	Pyrodigal	gene	270086	271141	.	+	.	ID=GCA000144955_00229_gene;locus_tag=GCA000144955_00229;gene=tdh
contig_1	Pyrodigal	CDS	270086	271141	.	+	0	ID=GCA000144955_00229;Name=Sorbitol dehydrogenase;locus_tag=GCA000144955_00229;product=Sorbitol dehydrogenase;gene=tdh;Parent=GCA000144955_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000644603.1,SO:0001217,UniParc:UPI0001DDA078,UniRef:UniRef100_UPI0001DDA078,UniRef:UniRef50_Q9Z9U1,UniRef:UniRef90_A0A2I7Y3H3
contig_1	Pyrodigal	gene	271143	271289	.	+	.	ID=GCA000144955_00230_gene;locus_tag=GCA000144955_00230
contig_1	Pyrodigal	CDS	271143	271289	.	+	0	ID=GCA000144955_00230;Name=hypothetical protein;locus_tag=GCA000144955_00230;product=hypothetical protein;Parent=GCA000144955_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230358.1,SO:0001217,UniParc:UPI0000054688,UniRef:UniRef100_Q2G2C6,UniRef:UniRef50_Q2G2C6,UniRef:UniRef90_Q2G2C6
contig_1	Pyrodigal	gene	271313	272356	.	+	.	ID=GCA000144955_00231_gene;locus_tag=GCA000144955_00231;gene=tdh
contig_1	Pyrodigal	CDS	271313	272356	.	+	0	ID=GCA000144955_00231;Name=Enoyl reductase (ER) domain-containing protein;locus_tag=GCA000144955_00231;product=Enoyl reductase (ER) domain-containing protein;gene=tdh;Parent=GCA000144955_00231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000645597.1,SO:0001217,UniParc:UPI0001DDA209,UniRef:UniRef100_UPI0001DDA209,UniRef:UniRef50_A0A9X8RLC9,UniRef:UniRef90_Q2G2C5
contig_1	Pyrodigal	gene	272883	273599	.	+	.	ID=GCA000144955_00232_gene;locus_tag=GCA000144955_00232;gene=tarI2
contig_1	Pyrodigal	CDS	272883	273599	.	+	0	ID=GCA000144955_00232;Name=Ribitol-5-phosphate cytidylyltransferase 2;locus_tag=GCA000144955_00232;product=Ribitol-5-phosphate cytidylyltransferase 2;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI2;Parent=GCA000144955_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000638462.1,SO:0001217,UniParc:UPI0001DDA20A,UniRef:UniRef100_UPI0001DDA20A,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q2G2C4;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	273592	274617	.	+	.	ID=GCA000144955_00233_gene;locus_tag=GCA000144955_00233;gene=tarJ'
contig_1	Pyrodigal	CDS	273592	274617	.	+	0	ID=GCA000144955_00233;Name=Ribulose-5-phosphate reductase 2;locus_tag=GCA000144955_00233;product=Ribulose-5-phosphate reductase 2;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ';Parent=GCA000144955_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610183.1,SO:0001217,UniParc:UPI0001DA20C0,UniRef:UniRef100_A0AAW9XEK0,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1C4;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	274639	276333	.	+	.	ID=GCA000144955_00234_gene;locus_tag=GCA000144955_00234;gene=tarL
contig_1	Pyrodigal	CDS	274639	276333	.	+	0	ID=GCA000144955_00234;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000144955_00234;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000144955_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000169003.1,SO:0001217,UniParc:UPI0001DDA20B,UniRef:UniRef100_UPI0001DDA20B,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1C2;ec_number=2.7.8.14
contig_1	Infernal	gene	276460	276682	.	+	.	ID=GCA000144955_00235_gene;locus_tag=GCA000144955_00235;gene=S35
contig_1	Infernal	ncRNA	276460	276682	1.9e-18	+	.	ID=GCA000144955_00235;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00235;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00235_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	276956	278125	.	+	.	ID=GCA000144955_00236_gene;locus_tag=GCA000144955_00236;gene=tarF
contig_1	Pyrodigal	CDS	276956	278125	.	+	0	ID=GCA000144955_00236;Name=teichoic acid glycerol-phosphate transferase TarF;locus_tag=GCA000144955_00236;product=teichoic acid glycerol-phosphate transferase TarF;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarF;Parent=GCA000144955_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000598267.1,SO:0001217,UniParc:UPI0001DDA20C,UniRef:UniRef100_UPI0001DDA20C,UniRef:UniRef50_Q2G1C1,UniRef:UniRef90_Q2G1C1;ec_number=2.7.8.45
contig_1	Pyrodigal	gene	278404	279120	.	+	.	ID=GCA000144955_00237_gene;locus_tag=GCA000144955_00237;gene=tarI1
contig_1	Pyrodigal	CDS	278404	279120	.	+	0	ID=GCA000144955_00237;Name=Ribitol-5-phosphate cytidylyltransferase 1;locus_tag=GCA000144955_00237;product=Ribitol-5-phosphate cytidylyltransferase 1;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI1;Parent=GCA000144955_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000872486.1,SO:0001217,UniParc:UPI0000054682,UniRef:UniRef100_Q2G1C0,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q2G1C0;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	279113	280138	.	+	.	ID=GCA000144955_00238_gene;locus_tag=GCA000144955_00238;gene=tarJ
contig_1	Pyrodigal	CDS	279113	280138	.	+	0	ID=GCA000144955_00238;Name=Ribulose-5-phosphate reductase 1;locus_tag=GCA000144955_00238;product=Ribulose-5-phosphate reductase 1;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ;Parent=GCA000144955_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610203.1,SO:0001217,UniParc:UPI00000D9C01,UniRef:UniRef100_Q2G1B9,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1B9;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	280160	281848	.	+	.	ID=GCA000144955_00239_gene;locus_tag=GCA000144955_00239;gene=tarL
contig_1	Pyrodigal	CDS	280160	281848	.	+	0	ID=GCA000144955_00239;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000144955_00239;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000144955_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000240920.1,SO:0001217,UniParc:UPI00000D789A,UniRef:UniRef100_Q2G1B8,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1B8;ec_number=2.7.8.14
contig_1	Pyrodigal	gene	281881	283602	.	+	.	ID=GCA000144955_00240_gene;locus_tag=GCA000144955_00240;gene=tarS
contig_1	Pyrodigal	CDS	281881	283602	.	+	0	ID=GCA000144955_00240;Name=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;locus_tag=GCA000144955_00240;product=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;Dbxref=GO:0016757,GO:0019350,GO:0046677,GO:0046872,GO:0071555;gene=tarS;Parent=GCA000144955_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000975351,COG:COG0463,COG:M,RefSeq:WP_000975360.1,SO:0001217,UniParc:UPI00030D1076,UniRef:UniRef100_UPI00030D1076,UniRef:UniRef50_A0A0H3JPC6,UniRef:UniRef90_A0A0H3JPC6;ec_number=2.4.1.355
contig_1	Pyrodigal	gene	283757	284431	.	+	.	ID=GCA000144955_00241_gene;locus_tag=GCA000144955_00241;gene=scdA
contig_1	Pyrodigal	CDS	283757	284431	.	+	0	ID=GCA000144955_00241;Name=iron-sulfur cluster repair di-iron protein ScdA;locus_tag=GCA000144955_00241;product=iron-sulfur cluster repair di-iron protein ScdA;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0046872,GO:0051409;gene=scdA;Parent=GCA000144955_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2846,COG:O,RefSeq:WP_000608824.1,SO:0001217,UniParc:UPI0001DDA20E,UniRef:UniRef100_UPI0001DDA20E,UniRef:UniRef50_P72360,UniRef:UniRef90_P72360
contig_1	Pyrodigal	gene	284677	286431	.	+	.	ID=GCA000144955_00242_gene;locus_tag=GCA000144955_00242;gene=lytS
contig_1	Pyrodigal	CDS	284677	286431	.	+	0	ID=GCA000144955_00242;Name=Sensor histidine kinase/phosphatase LytS;locus_tag=GCA000144955_00242;product=Sensor histidine kinase/phosphatase LytS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0016787,GO:0071555;gene=lytS;Parent=GCA000144955_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3275,COG:T,KEGG:K07704,RefSeq:WP_014532730.1,SO:0001217,UniParc:UPI0001DDA20F,UniRef:UniRef100_UPI0001DDA20F,UniRef:UniRef50_Q53705,UniRef:UniRef90_Q53705;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	286434	287174	.	+	.	ID=GCA000144955_00243_gene;locus_tag=GCA000144955_00243;gene=lytR
contig_1	Pyrodigal	CDS	286434	287174	.	+	0	ID=GCA000144955_00243;Name=response regulator transcription factor LytR;locus_tag=GCA000144955_00243;product=response regulator transcription factor LytR;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytR;Parent=GCA000144955_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,RefSeq:WP_000645453.1,SO:0001217,UniParc:UPI00003B1383,UniRef:UniRef100_Q6GK51,UniRef:UniRef50_P60611,UniRef:UniRef90_P60611
contig_1	Pyrodigal	gene	287293	287730	.	+	.	ID=GCA000144955_00244_gene;locus_tag=GCA000144955_00244;gene=lrgA
contig_1	Pyrodigal	CDS	287293	287730	.	+	0	ID=GCA000144955_00244;Name=antiholin-like murein hydrolase modulator LrgA;locus_tag=GCA000144955_00244;product=antiholin-like murein hydrolase modulator LrgA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgA;Parent=GCA000144955_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001792906,COG:COG1380,COG:R,KEGG:K05338,SO:0001217,UniParc:UPI00000CABD5,UniRef:UniRef100_P60649,UniRef:UniRef50_P72358,UniRef:UniRef90_P72358
contig_1	Pyrodigal	gene	287723	288424	.	+	.	ID=GCA000144955_00245_gene;locus_tag=GCA000144955_00245;gene=lrgB
contig_1	Pyrodigal	CDS	287723	288424	.	+	0	ID=GCA000144955_00245;Name=antiholin-like protein LrgB;locus_tag=GCA000144955_00245;product=antiholin-like protein LrgB;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgB;Parent=GCA000144955_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,KEGG:K05339,RefSeq:WP_000607068.1,SO:0001217,UniParc:UPI0001DDA210,UniRef:UniRef100_UPI0001DDA210,UniRef:UniRef50_P60643,UniRef:UniRef90_P60643
contig_1	Pyrodigal	gene	288765	291056	.	+	.	ID=GCA000144955_00246_gene;locus_tag=GCA000144955_00246
contig_1	Pyrodigal	CDS	288765	291056	.	+	0	ID=GCA000144955_00246;Name=Nitric oxide reductase;locus_tag=GCA000144955_00246;product=Nitric oxide reductase;Parent=GCA000144955_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062644.1,SO:0001217,UniParc:UPI0001DDA211,UniRef:UniRef100_UPI0001DDA211,UniRef:UniRef50_A0A2S6D3B7,UniRef:UniRef90_A0A2S6D3B7
contig_1	Pyrodigal	gene	291282	291986	.	-	.	ID=GCA000144955_00247_gene;locus_tag=GCA000144955_00247;gene=mngR
contig_1	Pyrodigal	CDS	291282	291986	.	-	0	ID=GCA000144955_00247;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000144955_00247;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000144955_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03489,RefSeq:WP_000922329.1,SO:0001217,UniParc:UPI00004B5AB8,UniRef:UniRef100_Q2G1B1,UniRef:UniRef50_Q2G1B1,UniRef:UniRef90_Q2G1B1
contig_1	Pyrodigal	gene	292133	292924	.	+	.	ID=GCA000144955_00248_gene;locus_tag=GCA000144955_00248
contig_1	Pyrodigal	CDS	292133	292924	.	+	0	ID=GCA000144955_00248;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000144955_00248;product=PTS system glucose-specific EIIA component;Parent=GCA000144955_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000527263.1,SO:0001217,UniParc:UPI0001DDA212,UniRef:UniRef100_A0AA40MFZ0,UniRef:UniRef50_A0A389V698,UniRef:UniRef90_A0A0E1XKA3
contig_1	Pyrodigal	gene	292940	294376	.	+	.	ID=GCA000144955_00249_gene;locus_tag=GCA000144955_00249;gene=bglB
contig_1	Pyrodigal	CDS	292940	294376	.	+	0	ID=GCA000144955_00249;Name=6-phospho-beta-glucosidase%2C putative;locus_tag=GCA000144955_00249;product=6-phospho-beta-glucosidase%2C putative;gene=bglB;Parent=GCA000144955_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000183387.1,SO:0001217,UniParc:UPI0001DDA213,UniRef:UniRef100_UPI0001DDA213,UniRef:UniRef50_Q46829,UniRef:UniRef90_Q2G1A9
contig_1	Infernal	gene	294415	294681	.	-	.	ID=GCA000144955_00250_gene;locus_tag=GCA000144955_00250;gene=S35
contig_1	Infernal	ncRNA	294415	294681	5e-17	-	.	ID=GCA000144955_00250;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00250;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00250_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	294892	295653	.	-	.	ID=GCA000144955_00251_gene;locus_tag=GCA000144955_00251;gene=ubiE
contig_1	Pyrodigal	CDS	294892	295653	.	-	0	ID=GCA000144955_00251;Name=SAM-dependent methyltransferase;locus_tag=GCA000144955_00251;product=SAM-dependent methyltransferase;gene=ubiE;Parent=GCA000144955_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000031260.1,SO:0001217,UniParc:UPI0001DDA215,UniRef:UniRef100_UPI0001DDA215,UniRef:UniRef50_A0A131JTX0,UniRef:UniRef90_A0A131JTX0
contig_1	Pyrodigal	gene	295903	296817	.	-	.	ID=GCA000144955_00252_gene;locus_tag=GCA000144955_00252;gene=rbsK
contig_1	Pyrodigal	CDS	295903	296817	.	-	0	ID=GCA000144955_00252;Name=ribokinase;locus_tag=GCA000144955_00252;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0019303,GO:0046872;gene=rbsK;Parent=GCA000144955_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_000182744.1,SO:0001217,UniParc:UPI0001DDA216,UniRef:UniRef100_UPI0001DDA216,UniRef:UniRef50_A0A0H2WZY4,UniRef:UniRef90_A0A0H2WZY4;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	296845	297249	.	-	.	ID=GCA000144955_00253_gene;locus_tag=GCA000144955_00253;gene=rbsD
contig_1	Pyrodigal	CDS	296845	297249	.	-	0	ID=GCA000144955_00253;Name=D-ribose pyranase;locus_tag=GCA000144955_00253;product=D-ribose pyranase;Dbxref=GO:0005829,GO:0016872,GO:0019303,GO:0048029,GO:0062193;gene=rbsD;Parent=GCA000144955_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1869,COG:G,KEGG:K06726,RefSeq:WP_000747873.1,SO:0001217,UniParc:UPI0000054673,UniRef:UniRef100_Q2G1A5,UniRef:UniRef50_Q2G1A5,UniRef:UniRef90_Q2G1A5;ec_number=5.4.99.62
contig_1	Pyrodigal	gene	297264	298145	.	-	.	ID=GCA000144955_00254_gene;locus_tag=GCA000144955_00254;gene=rbsU
contig_1	Pyrodigal	CDS	297264	298145	.	-	0	ID=GCA000144955_00254;Name=ribose transporter RbsU;locus_tag=GCA000144955_00254;product=ribose transporter RbsU;Dbxref=GO:0005886,GO:0015144,GO:0015591,GO:0015752;gene=rbsU;Parent=GCA000144955_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000029204,COG:COG4975,COG:G,KEGG:K06216,RefSeq:WP_000029200.1,SO:0001217,UniParc:UPI0001DDA217,UniRef:UniRef100_UPI0001DDA217,UniRef:UniRef50_Q8CN16,UniRef:UniRef90_P60946
contig_1	Pyrodigal	gene	298376	299374	.	-	.	ID=GCA000144955_00255_gene;locus_tag=GCA000144955_00255;gene=rbsR
contig_1	Pyrodigal	CDS	298376	299374	.	-	0	ID=GCA000144955_00255;Name=ribose utilization transcriptional repressor RbsR;locus_tag=GCA000144955_00255;product=ribose utilization transcriptional repressor RbsR;gene=rbsR;Parent=GCA000144955_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000757872.1,SO:0001217,UniParc:UPI0001DDA218,UniRef:UniRef100_UPI0001DDA218,UniRef:UniRef50_Q2G1A3,UniRef:UniRef90_Q2G1A3
contig_1	Pyrodigal	gene	299756	300148	.	+	.	ID=GCA000144955_00256_gene;locus_tag=GCA000144955_00256
contig_1	Pyrodigal	CDS	299756	300148	.	+	0	ID=GCA000144955_00256;Name=Phage protein;locus_tag=GCA000144955_00256;product=Phage protein;Parent=GCA000144955_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001159764.1,SO:0001217,UniParc:UPI00003B138B,UniRef:UniRef100_A0A7Z7W0P2,UniRef:UniRef50_Q5HRD5,UniRef:UniRef90_A0A7U7JSC9
contig_1	Pyrodigal	gene	300277	301653	.	-	.	ID=GCA000144955_00257_gene;locus_tag=GCA000144955_00257;gene=uhpC
contig_1	Pyrodigal	CDS	300277	301653	.	-	0	ID=GCA000144955_00257;Name=Quinolone resistance protein NorB;locus_tag=GCA000144955_00257;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000144955_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001066559.1,SO:0001217,UniParc:UPI0001DDA219,UniRef:UniRef100_UPI0001DDA219,UniRef:UniRef50_A0A115E5S9,UniRef:UniRef90_A0A115E5S9
contig_1	Pyrodigal	gene	301887	302879	.	+	.	ID=GCA000144955_00258_gene;locus_tag=GCA000144955_00258;gene=yxeI
contig_1	Pyrodigal	CDS	301887	302879	.	+	0	ID=GCA000144955_00258;Name=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;locus_tag=GCA000144955_00258;product=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;gene=yxeI;Parent=GCA000144955_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3049,COG:MR,RefSeq:WP_000337369.1,SO:0001217,UniParc:UPI0001DDA21A,UniRef:UniRef100_UPI0001DDA21A,UniRef:UniRef50_Q2G198,UniRef:UniRef90_Q2G198
contig_1	Pyrodigal	gene	303205	304155	.	+	.	ID=GCA000144955_00259_gene;locus_tag=GCA000144955_00259;gene=lytM
contig_1	Pyrodigal	CDS	303205	304155	.	+	0	ID=GCA000144955_00259;Name=glycine-glycine endopeptidase LytM;locus_tag=GCA000144955_00259;product=glycine-glycine endopeptidase LytM;Dbxref=GO:0004222,GO:0005576,GO:0006508,GO:0046872,GO:0071555;gene=lytM;Parent=GCA000144955_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000736798,COG:COG0739,COG:M,KEGG:K08259,RefSeq:WP_000736791.1,SO:0001217,UniParc:UPI0001DDA21B,UniRef:UniRef100_UPI0001DDA21B,UniRef:UniRef50_O33599,UniRef:UniRef90_O33599;ec_number=3.4.24.75
contig_1	Pyrodigal	gene	304207	304866	.	-	.	ID=GCA000144955_00260_gene;locus_tag=GCA000144955_00260;gene=rbbA
contig_1	Pyrodigal	CDS	304207	304866	.	-	0	ID=GCA000144955_00260;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_00260;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000144955_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000570070.1,SO:0001217,UniParc:UPI00000CA9F1,UniRef:UniRef100_A0A0D1GHD7,UniRef:UniRef50_Q2G196,UniRef:UniRef90_Q2G196
contig_1	Pyrodigal	gene	304880	305800	.	-	.	ID=GCA000144955_00261_gene;locus_tag=GCA000144955_00261
contig_1	Pyrodigal	CDS	304880	305800	.	-	0	ID=GCA000144955_00261;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000144955_00261;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000144955_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000806127.1,SO:0001217,UniParc:UPI0001DDA21C,UniRef:UniRef100_UPI0001DDA21C,UniRef:UniRef50_Q2G195,UniRef:UniRef90_Q2G195
contig_1	Pyrodigal	gene	305797	306963	.	-	.	ID=GCA000144955_00262_gene;locus_tag=GCA000144955_00262
contig_1	Pyrodigal	CDS	305797	306963	.	-	0	ID=GCA000144955_00262;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000144955_00262;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000144955_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848769.1,SO:0001217,UniParc:UPI0001DDA21D,UniRef:UniRef100_UPI0001DDA21D,UniRef:UniRef50_Q2G194,UniRef:UniRef90_Q2G194
contig_1	Pyrodigal	gene	307030	308553	.	-	.	ID=GCA000144955_00263_gene;locus_tag=GCA000144955_00263
contig_1	Pyrodigal	CDS	307030	308553	.	-	0	ID=GCA000144955_00263;Name=DUF6583 domain-containing protein;locus_tag=GCA000144955_00263;product=DUF6583 domain-containing protein;Parent=GCA000144955_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038521.1,SO:0001217,UniParc:UPI0001DDA21E,UniRef:UniRef100_UPI0001DDA21E,UniRef:UniRef50_Q2G193,UniRef:UniRef90_A0A2K4AIL8
contig_1	Pyrodigal	gene	308824	309474	.	+	.	ID=GCA000144955_00264_gene;locus_tag=GCA000144955_00264
contig_1	Pyrodigal	CDS	308824	309474	.	+	0	ID=GCA000144955_00264;Name=DUF5079 domain-containing protein;locus_tag=GCA000144955_00264;product=DUF5079 domain-containing protein;Parent=GCA000144955_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000421231.1,SO:0001217,UniParc:UPI0001DDA21F,UniRef:UniRef100_UPI0001DDA21F,UniRef:UniRef50_Q2G192,UniRef:UniRef90_A0AAN1ZPZ0
contig_1	Pyrodigal	gene	309503	310150	.	+	.	ID=GCA000144955_00265_gene;locus_tag=GCA000144955_00265
contig_1	Pyrodigal	CDS	309503	310150	.	+	0	ID=GCA000144955_00265;Name=DUF5079 domain-containing protein;locus_tag=GCA000144955_00265;product=DUF5079 domain-containing protein;Parent=GCA000144955_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000403078.1,SO:0001217,UniParc:UPI0001DDA220,UniRef:UniRef100_UPI0001DDA220,UniRef:UniRef50_Q2G192,UniRef:UniRef90_A0AAN1ZQ13
contig_1	Pyrodigal	gene	310184	310684	.	+	.	ID=GCA000144955_00266_gene;locus_tag=GCA000144955_00266
contig_1	Pyrodigal	CDS	310184	310684	.	+	0	ID=GCA000144955_00266;Name=DUF5080 domain-containing protein;locus_tag=GCA000144955_00266;product=DUF5080 domain-containing protein;Parent=GCA000144955_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0015F90BDC
contig_1	Pyrodigal	gene	310912	311814	.	-	.	ID=GCA000144955_00267_gene;locus_tag=GCA000144955_00267
contig_1	Pyrodigal	CDS	310912	311814	.	-	0	ID=GCA000144955_00267;Name=Secretory antigen;locus_tag=GCA000144955_00267;product=Secretory antigen;Parent=GCA000144955_00267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,SO:0001217,UniRef:UniRef50_A0A658WJQ6,UniRef:UniRef90_A0A658WJQ6
contig_1	Pyrodigal	gene	312053	312346	.	+	.	ID=GCA000144955_00268_gene;locus_tag=GCA000144955_00268;gene=esxA
contig_1	Pyrodigal	CDS	312053	312346	.	+	0	ID=GCA000144955_00268;Name=WXG100 family type VII secretion effector EsxA;locus_tag=GCA000144955_00268;product=WXG100 family type VII secretion effector EsxA;Dbxref=GO:0005576;gene=esxA;Parent=GCA000144955_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001240826,COG:COG4842,COG:V,RefSeq:WP_001240826.1,SO:0001217,UniParc:UPI00000D7884,UniRef:UniRef100_Q2G189,UniRef:UniRef50_Q2G189,UniRef:UniRef90_Q2G189
contig_1	Pyrodigal	gene	312429	315458	.	+	.	ID=GCA000144955_00269_gene;locus_tag=GCA000144955_00269;gene=esaA
contig_1	Pyrodigal	CDS	312429	315458	.	+	0	ID=GCA000144955_00269;Name=type VII secretion system protein EsaA;locus_tag=GCA000144955_00269;product=type VII secretion system protein EsaA;Dbxref=GO:0005886;gene=esaA;Parent=GCA000144955_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000728965.1,SO:0001217,UniParc:UPI0001DDA3AE,UniRef:UniRef100_UPI0001DDA3AE,UniRef:UniRef50_Q2G188,UniRef:UniRef90_Q2G188,VFDB:VFC0086,VFDB:VFG002406
contig_1	Pyrodigal	gene	315458	315916	.	+	.	ID=GCA000144955_00270_gene;locus_tag=GCA000144955_00270;gene=essA
contig_1	Pyrodigal	CDS	315458	315916	.	+	0	ID=GCA000144955_00270;Name=type VII secretion system protein EssA%2C monotopic membrane protein;locus_tag=GCA000144955_00270;product=type VII secretion system protein EssA%2C monotopic membrane protein;Dbxref=GO:0005886,GO:0009306;gene=essA;Parent=GCA000144955_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000928935.1,SO:0001217,UniParc:UPI0000054661,UniRef:UniRef100_Q5HJ89,UniRef:UniRef50_P0C052,UniRef:UniRef90_P0C052,VFDB:VFC0086,VFDB:VFG002404
contig_1	Pyrodigal	gene	315888	316130	.	+	.	ID=GCA000144955_00271_gene;locus_tag=GCA000144955_00271;gene=esaB
contig_1	Pyrodigal	CDS	315888	316130	.	+	0	ID=GCA000144955_00271;Name=type VII secretion protein EsaB;locus_tag=GCA000144955_00271;product=type VII secretion protein EsaB;Dbxref=GO:0005737;gene=esaB;Parent=GCA000144955_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071606,COG:COG5417,COG:U,RefSeq:WP_001071606.1,SO:0001217,UniParc:UPI0000054660,UniRef:UniRef100_Q5HJ88,UniRef:UniRef50_Q5HJ88,UniRef:UniRef90_Q5HJ88
contig_1	Pyrodigal	gene	316143	317477	.	+	.	ID=GCA000144955_00272_gene;locus_tag=GCA000144955_00272;gene=essB
contig_1	Pyrodigal	CDS	316143	317477	.	+	0	ID=GCA000144955_00272;Name=type VII secretion protein EssB;locus_tag=GCA000144955_00272;product=type VII secretion protein EssB;Dbxref=GO:0005886,GO:0009306;gene=essB;Parent=GCA000144955_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4499,COG:U,RefSeq:WP_000240344.1,SO:0001217,UniParc:UPI0001DDA3AF,UniRef:UniRef100_UPI0001DDA3AF,UniRef:UniRef50_Q2G185,UniRef:UniRef90_Q2G185
contig_1	Pyrodigal	gene	317499	321938	.	+	.	ID=GCA000144955_00273_gene;locus_tag=GCA000144955_00273;gene=essC
contig_1	Pyrodigal	CDS	317499	321938	.	+	0	ID=GCA000144955_00273;Name=type VII secretion system protein EssC%2C FtsK/SpoIIIE family ATPase;locus_tag=GCA000144955_00273;product=type VII secretion system protein EssC%2C FtsK/SpoIIIE family ATPase;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009306;gene=essC;Parent=GCA000144955_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_000549313.1,SO:0001217,UniParc:UPI0001DDA3B0,UniRef:UniRef100_UPI0001DDA3B0,UniRef:UniRef50_Q2G184,UniRef:UniRef90_Q2G184,VFDB:VFC0086,VFDB:VFG002409
contig_1	Pyrodigal	gene	321968	322360	.	+	.	ID=GCA000144955_00274_gene;locus_tag=GCA000144955_00274;gene=esxC
contig_1	Pyrodigal	CDS	321968	322360	.	+	0	ID=GCA000144955_00274;Name=type VII secretion system secreted protein EsxC;locus_tag=GCA000144955_00274;product=type VII secretion system secreted protein EsxC;Dbxref=GO:0005576;gene=esxC;Parent=GCA000144955_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001010289.1,SO:0001217,UniParc:UPI000005465C,UniRef:UniRef100_A0A0H2XIK2,UniRef:UniRef50_Q99WT8,UniRef:UniRef90_Q99WT8,VFDB:VFC0086,VFDB:VFG002410
contig_1	Pyrodigal	gene	322376	322690	.	+	.	ID=GCA000144955_00275_gene;locus_tag=GCA000144955_00275;gene=esxB
contig_1	Pyrodigal	CDS	322376	322690	.	+	0	ID=GCA000144955_00275;Name=WXG100 family type VII secretion effector EsxB;locus_tag=GCA000144955_00275;product=WXG100 family type VII secretion effector EsxB;Dbxref=GO:0005576;gene=esxB;Parent=GCA000144955_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000509668,RefSeq:WP_000509668.1,SO:0001217,UniParc:UPI000005465B,UniRef:UniRef100_Q2G182,UniRef:UniRef50_Q2G182,UniRef:UniRef90_Q2G182
contig_1	Pyrodigal	gene	322687	323364	.	+	.	ID=GCA000144955_00276_gene;locus_tag=GCA000144955_00276;gene=essE
contig_1	Pyrodigal	CDS	322687	323364	.	+	0	ID=GCA000144955_00276;Name=type VII secretion system chaperone protein;locus_tag=GCA000144955_00276;product=type VII secretion system chaperone protein;Dbxref=GO:0005576;gene=essE;Parent=GCA000144955_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001AE86AA,UniRef:UniRef100_A0A0U1MWA3,UniRef:UniRef50_Q2G181,UniRef:UniRef90_Q2G181,VFDB:VFC0086,VFDB:VFG049701
contig_1	Pyrodigal	gene	323370	323681	.	+	.	ID=GCA000144955_00277_gene;locus_tag=GCA000144955_00277;gene=esxD
contig_1	Pyrodigal	CDS	323370	323681	.	+	0	ID=GCA000144955_00277;Name=type VII secretion system secreted protein EsxD;locus_tag=GCA000144955_00277;product=type VII secretion system secreted protein EsxD;Dbxref=GO:0005576;gene=esxD;Parent=GCA000144955_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001F24552,UniRef:UniRef100_A0A1Q4GZ01,UniRef:UniRef50_A0A0H2XDF9,UniRef:UniRef90_A0A0H2XDF9,VFDB:VFC0086,VFDB:VFG049714
contig_1	Pyrodigal	gene	323682	325535	.	+	.	ID=GCA000144955_00278_gene;locus_tag=GCA000144955_00278;gene=esaD
contig_1	Pyrodigal	CDS	323682	325535	.	+	0	ID=GCA000144955_00278;Name=type VII secretion system secreted protein%2C a nuclease toxin EsaD;locus_tag=GCA000144955_00278;product=type VII secretion system secreted protein%2C a nuclease toxin EsaD;Dbxref=GO:0005576,GO:0005886;gene=esaD;Parent=GCA000144955_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5444,COG:V,SO:0001217,UniRef:UniRef50_Q2G179,UniRef:UniRef90_Q2G179,VFDB:VFC0086,VFDB:VFG049727
contig_1	Pyrodigal	gene	325546	326049	.	+	.	ID=GCA000144955_00279_gene;locus_tag=GCA000144955_00279
contig_1	Pyrodigal	CDS	325546	326049	.	+	0	ID=GCA000144955_00279;Name=TIGR01741 family protein;locus_tag=GCA000144955_00279;product=TIGR01741 family protein;Parent=GCA000144955_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141929.1,SO:0001217,UniParc:UPI0001DDA3B3,UniRef:UniRef100_UPI0001DDA3B3,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A077UJ57
contig_1	Pyrodigal	gene	326245	326928	.	+	.	ID=GCA000144955_00280_gene;locus_tag=GCA000144955_00280
contig_1	Pyrodigal	CDS	326245	326928	.	+	0	ID=GCA000144955_00280;Name=DUF5079 domain-containing protein;locus_tag=GCA000144955_00280;product=DUF5079 domain-containing protein;Parent=GCA000144955_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000208406.1,SO:0001217,UniParc:UPI0001DDA3B4,UniRef:UniRef100_UPI0001DDA3B4,UniRef:UniRef50_Q2G177,UniRef:UniRef90_Q2G177
contig_1	Pyrodigal	gene	327280	327498	.	+	.	ID=GCA000144955_00281_gene;locus_tag=GCA000144955_00281
contig_1	Pyrodigal	CDS	327280	327498	.	+	0	ID=GCA000144955_00281;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000144955_00281;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000144955_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431307.1,SO:0001217,UniParc:UPI000005490C,UniRef:UniRef100_Q2G175,UniRef:UniRef50_A0A1D4LJZ2,UniRef:UniRef90_A0A2K4AI94
contig_1	Pyrodigal	gene	327588	328076	.	+	.	ID=GCA000144955_00282_gene;locus_tag=GCA000144955_00282;gene=yezG
contig_1	Pyrodigal	CDS	327588	328076	.	+	0	ID=GCA000144955_00282;Name=antitoxin YezG family protein;locus_tag=GCA000144955_00282;product=antitoxin YezG family protein;gene=yezG;Parent=GCA000144955_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001008474.1,SO:0001217,UniParc:UPI0001DDA3B5,UniRef:UniRef100_UPI0001DDA3B5,UniRef:UniRef50_Q2G178,UniRef:UniRef90_UPI0001DDA3B5
contig_1	Pyrodigal	gene	328699	329073	.	+	.	ID=GCA000144955_00283_gene;locus_tag=GCA000144955_00283
contig_1	Pyrodigal	CDS	328699	329073	.	+	0	ID=GCA000144955_00283;Name=DUF4467 domain-containing protein;locus_tag=GCA000144955_00283;product=DUF4467 domain-containing protein;Parent=GCA000144955_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000822170.1,SO:0001217,UniParc:UPI0001DDA3B6,UniRef:UniRef100_UPI0001DDA3B6,UniRef:UniRef50_Q2G174,UniRef:UniRef90_Q2G174
contig_1	Pyrodigal	gene	329223	329621	.	+	.	ID=GCA000144955_00284_gene;locus_tag=GCA000144955_00284
contig_1	Pyrodigal	CDS	329223	329621	.	+	0	ID=GCA000144955_00284;Name=DUF4064 domain-containing protein;locus_tag=GCA000144955_00284;product=DUF4064 domain-containing protein;Parent=GCA000144955_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000415672.1,SO:0001217,UniParc:UPI0001DDA3B7,UniRef:UniRef100_UPI0001DDA3B7,UniRef:UniRef50_Q2G173,UniRef:UniRef90_Q2G173
contig_1	Pyrodigal	gene	329837	330661	.	-	.	ID=GCA000144955_00285_gene;locus_tag=GCA000144955_00285;gene=focA
contig_1	Pyrodigal	CDS	329837	330661	.	-	0	ID=GCA000144955_00285;Name=Formate/nitrite transporter;locus_tag=GCA000144955_00285;product=Formate/nitrite transporter;gene=focA;Parent=GCA000144955_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000659770.1,SO:0001217,UniParc:UPI00000D7745,UniRef:UniRef100_Q2G172,UniRef:UniRef50_Q2G172,UniRef:UniRef90_Q2G172
contig_1	Pyrodigal	gene	330900	332207	.	-	.	ID=GCA000144955_00286_gene;locus_tag=GCA000144955_00286;gene=brnQ
contig_1	Pyrodigal	CDS	330900	332207	.	-	0	ID=GCA000144955_00286;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000144955_00286;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000144955_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,RefSeq:WP_000745104.1,SO:0001217,UniParc:UPI0001DDA3B8,UniRef:UniRef100_UPI0001DDA3B8,UniRef:UniRef50_A0A391ES74,UniRef:UniRef90_A0A391ES74
contig_1	Pyrodigal	gene	332478	333002	.	+	.	ID=GCA000144955_00287_gene;locus_tag=GCA000144955_00287;gene=yfiT
contig_1	Pyrodigal	CDS	332478	333002	.	+	0	ID=GCA000144955_00287;Name=YfiT family bacillithiol transferase;locus_tag=GCA000144955_00287;product=YfiT family bacillithiol transferase;Dbxref=GO:0016151,GO:0016765;gene=yfiT;Parent=GCA000144955_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001102828.1,SO:0001217,UniParc:UPI0001DDA3B9,UniRef:UniRef100_UPI0001DDA3B9,UniRef:UniRef50_Q8ET50,UniRef:UniRef90_A0A2K4AIL4
contig_1	Pyrodigal	gene	333542	334432	.	+	.	ID=GCA000144955_00288_gene;locus_tag=GCA000144955_00288
contig_1	Pyrodigal	CDS	333542	334432	.	+	0	ID=GCA000144955_00288;Name=5'-nucleotidase%2C lipoprotein e(P4) family;locus_tag=GCA000144955_00288;product=5'-nucleotidase%2C lipoprotein e(P4) family;Dbxref=GO:0009279;Parent=GCA000144955_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2503,COG:R,RefSeq:WP_001033881.1,SO:0001217,UniParc:UPI0001C0BAE2,UniRef:UniRef100_A0A8G2M8L9,UniRef:UniRef50_B9DL66,UniRef:UniRef90_A0A077UG02
contig_1	Pyrodigal	gene	334681	335730	.	+	.	ID=GCA000144955_00289_gene;locus_tag=GCA000144955_00289;gene=hrtB
contig_1	Pyrodigal	CDS	334681	335730	.	+	0	ID=GCA000144955_00289;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000144955_00289;product=Putative hemin transport system permease protein HrtB;gene=hrtB;Parent=GCA000144955_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_000477928.1,SO:0001217,UniParc:UPI0001DDA3BA,UniRef:UniRef100_UPI0001DDA3BA,UniRef:UniRef50_Q2G168,UniRef:UniRef90_Q2G168
contig_1	Pyrodigal	gene	335743	336420	.	+	.	ID=GCA000144955_00290_gene;locus_tag=GCA000144955_00290;gene=hrtA
contig_1	Pyrodigal	CDS	335743	336420	.	+	0	ID=GCA000144955_00290;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000144955_00290;product=Putative hemin import ATP-binding protein HrtA;gene=hrtA;Parent=GCA000144955_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000911019.1,SO:0001217,UniParc:UPI00000545A0,UniRef:UniRef100_A0A1D4ZP35,UniRef:UniRef50_A0A0Y9VH18,UniRef:UniRef90_A0A0Y9VH18
contig_1	Pyrodigal	gene	336627	337658	.	+	.	ID=GCA000144955_00291_gene;locus_tag=GCA000144955_00291;gene=frwC
contig_1	Pyrodigal	CDS	336627	337658	.	+	0	ID=GCA000144955_00291;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000144955_00291;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000144955_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,SO:0001217,UniParc:UPI00000D9C2A,UniRef:UniRef100_A0A0H3K6N4,UniRef:UniRef50_Q2G165,UniRef:UniRef90_Q2G165
contig_1	Pyrodigal	gene	338001	339119	.	+	.	ID=GCA000144955_00292_gene;locus_tag=GCA000144955_00292
contig_1	Pyrodigal	CDS	338001	339119	.	+	0	ID=GCA000144955_00292;Name=Ribokinase;locus_tag=GCA000144955_00292;product=Ribokinase;Parent=GCA000144955_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001283962.1,SO:0001217,UniParc:UPI0001DDA3BB,UniRef:UniRef100_UPI0001DDA3BB,UniRef:UniRef50_K1L4B1,UniRef:UniRef90_A0A7I8NL06
contig_1	Pyrodigal	gene	339094	340017	.	+	.	ID=GCA000144955_00293_gene;locus_tag=GCA000144955_00293;gene=psuG
contig_1	Pyrodigal	CDS	339094	340017	.	+	0	ID=GCA000144955_00293;Name=Pseudouridine-5'-phosphate glycosidase;locus_tag=GCA000144955_00293;product=Pseudouridine-5'-phosphate glycosidase;Dbxref=GO:0004730,GO:0005737,GO:0016798,GO:0046113,GO:0046872;gene=psuG;Parent=GCA000144955_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2313,COG:F,RefSeq:WP_000002062.1,SO:0001217,UniParc:UPI0001DDA3BC,UniRef:UniRef100_UPI0001DDA3BC,UniRef:UniRef50_Q28PY7,UniRef:UniRef90_Q8NYD0;ec_number=4.2.1.70
contig_1	Pyrodigal	gene	340028	341248	.	+	.	ID=GCA000144955_00294_gene;locus_tag=GCA000144955_00294;gene=nupC
contig_1	Pyrodigal	CDS	340028	341248	.	+	0	ID=GCA000144955_00294;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000144955_00294;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000144955_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_001022979.1,SO:0001217,UniParc:UPI0001DDA3BD,UniRef:UniRef100_UPI0001DDA3BD,UniRef:UniRef50_Q2G162,UniRef:UniRef90_Q2G162
contig_1	Pyrodigal	gene	341353	342885	.	-	.	ID=GCA000144955_00295_gene;locus_tag=GCA000144955_00295;gene=putP
contig_1	Pyrodigal	CDS	341353	342885	.	-	0	ID=GCA000144955_00295;Name=Na+/proline symporter;locus_tag=GCA000144955_00295;product=Na+/proline symporter;gene=putP;Parent=GCA000144955_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000665745.1,SO:0001217,UniParc:UPI0001B3AE26,UniRef:UniRef100_UPI0001B3AE26,UniRef:UniRef50_Q2G161,UniRef:UniRef90_Q2G161
contig_1	Pyrodigal	gene	342925	343806	.	-	.	ID=GCA000144955_00296_gene;locus_tag=GCA000144955_00296;gene=nanA
contig_1	Pyrodigal	CDS	342925	343806	.	-	0	ID=GCA000144955_00296;Name=N-acetylneuraminate lyase;locus_tag=GCA000144955_00296;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA000144955_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_001030738.1,SO:0001217,UniParc:UPI0000054599,UniRef:UniRef100_Q2G160,UniRef:UniRef50_Q2G160,UniRef:UniRef90_Q2G160;ec_number=4.1.3.3
contig_1	Pyrodigal	gene	343965	344825	.	+	.	ID=GCA000144955_00297_gene;locus_tag=GCA000144955_00297;gene=nagC
contig_1	Pyrodigal	CDS	343965	344825	.	+	0	ID=GCA000144955_00297;Name=Glucokinase;locus_tag=GCA000144955_00297;product=Glucokinase;gene=nagC;Parent=GCA000144955_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000291432.1,SO:0001217,UniParc:UPI00003B13AA,UniRef:UniRef100_A0A7Z7W0L4,UniRef:UniRef50_A0A2K4AIW7,UniRef:UniRef90_A0A2K4AIW7
contig_1	Pyrodigal	gene	345102	345902	.	-	.	ID=GCA000144955_00298_gene;locus_tag=GCA000144955_00298;gene=rpiR
contig_1	Pyrodigal	CDS	345102	345902	.	-	0	ID=GCA000144955_00298;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000144955_00298;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000144955_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000667382.1,SO:0001217,UniParc:UPI0000054596,UniRef:UniRef100_Q2G158,UniRef:UniRef50_Q2G158,UniRef:UniRef90_Q2G158
contig_1	Pyrodigal	gene	346043	346711	.	+	.	ID=GCA000144955_00299_gene;locus_tag=GCA000144955_00299;gene=nanE
contig_1	Pyrodigal	CDS	346043	346711	.	+	0	ID=GCA000144955_00299;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000144955_00299;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Dbxref=GO:0005829,GO:0005975,GO:0006053,GO:0019262,GO:0047465;gene=nanE;Parent=GCA000144955_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_000936731.1,SO:0001217,UniParc:UPI0001DDA3BE,UniRef:UniRef100_UPI0001DDA3BE,UniRef:UniRef50_Q8XNZ3,UniRef:UniRef90_Q2G157;ec_number=5.1.3.9
contig_1	Pyrodigal	gene	346838	348151	.	-	.	ID=GCA000144955_00300_gene;locus_tag=GCA000144955_00300;gene=spoVV
contig_1	Pyrodigal	CDS	346838	348151	.	-	0	ID=GCA000144955_00300;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000144955_00300;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000144955_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,RefSeq:WP_001077734.1,SO:0001217,UniParc:UPI0001DDA3BF,UniRef:UniRef100_UPI0001DDA3BF,UniRef:UniRef50_Q2G156,UniRef:UniRef90_Q2G156
contig_1	Pyrodigal	gene	348569	350644	.	+	.	ID=GCA000144955_00301_gene;locus_tag=GCA000144955_00301;gene=lip2
contig_1	Pyrodigal	CDS	348569	350644	.	+	0	ID=GCA000144955_00301;Name=YSIRK domain-containing triacylglycerol lipase Lip2/Geh;locus_tag=GCA000144955_00301;product=YSIRK domain-containing triacylglycerol lipase Lip2/Geh;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=lip2;Parent=GCA000144955_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000943836,COG:COG1075,COG:I,KEGG:K01046,RefSeq:WP_000943847.1,SO:0001217,UniParc:UPI0001DDA3C0,UniRef:UniRef100_UPI0001DDA3C0,UniRef:UniRef50_Q99WQ6,UniRef:UniRef90_Q99WQ6;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	350886	351713	.	-	.	ID=GCA000144955_00302_gene;locus_tag=GCA000144955_00302;gene=aes
contig_1	Pyrodigal	CDS	350886	351713	.	-	0	ID=GCA000144955_00302;Name=BD-FAE-like domain-containing protein;locus_tag=GCA000144955_00302;product=BD-FAE-like domain-containing protein;gene=aes;Parent=GCA000144955_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000136026.1,SO:0001217,UniParc:UPI0001C0B7ED,UniRef:UniRef100_A0A224B075,UniRef:UniRef50_Q2G154,UniRef:UniRef90_Q2G154
contig_1	Pyrodigal	gene	351771	352985	.	-	.	ID=GCA000144955_00303_gene;locus_tag=GCA000144955_00303;gene=fadH
contig_1	Pyrodigal	CDS	351771	352985	.	-	0	ID=GCA000144955_00303;Name=NADH-dependent flavin oxidoreductase;locus_tag=GCA000144955_00303;product=NADH-dependent flavin oxidoreductase;gene=fadH;Parent=GCA000144955_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000286480.1,SO:0001217,UniParc:UPI0001DDA55E,UniRef:UniRef100_UPI0001DDA55E,UniRef:UniRef50_P0DN73,UniRef:UniRef90_A0A2K4AJN2
contig_1	Pyrodigal	gene	353287	354288	.	+	.	ID=GCA000144955_00304_gene;locus_tag=GCA000144955_00304;gene=ssuD
contig_1	Pyrodigal	CDS	353287	354288	.	+	0	ID=GCA000144955_00304;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000144955_00304;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000144955_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000240055.1,SO:0001217,UniParc:UPI0001DDA55F,UniRef:UniRef100_UPI0001DDA55F,UniRef:UniRef50_A0A390B198,UniRef:UniRef90_A0A390B198
contig_1	Pyrodigal	gene	354322	354654	.	+	.	ID=GCA000144955_00305_gene;locus_tag=GCA000144955_00305;gene=gcvH
contig_1	Pyrodigal	CDS	354322	354654	.	+	0	ID=GCA000144955_00305;Name=Glycine cleavage system H-like protein;locus_tag=GCA000144955_00305;product=Glycine cleavage system H-like protein;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000144955_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000731878.1,SO:0001217,UniParc:UPI000005458F,UniRef:UniRef100_A0A0H3JT43,UniRef:UniRef50_P0DN69,UniRef:UniRef90_A0A0H3JT43
contig_1	Pyrodigal	gene	354655	355455	.	+	.	ID=GCA000144955_00306_gene;locus_tag=GCA000144955_00306
contig_1	Pyrodigal	CDS	354655	355455	.	+	0	ID=GCA000144955_00306;Name=protein-ADP-ribose hydrolase;locus_tag=GCA000144955_00306;product=protein-ADP-ribose hydrolase;Dbxref=GO:0016798;Parent=GCA000144955_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449078.1,SO:0001217,UniParc:UPI0001DDA560,UniRef:UniRef100_UPI0001DDA560,UniRef:UniRef50_P67343,UniRef:UniRef90_Q6GJZ1;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	355445	356389	.	+	.	ID=GCA000144955_00307_gene;locus_tag=GCA000144955_00307;gene=sIR2
contig_1	Pyrodigal	CDS	355445	356389	.	+	0	ID=GCA000144955_00307;Name=Protein ADP-ribosyltransferase;locus_tag=GCA000144955_00307;product=Protein ADP-ribosyltransferase;Dbxref=GO:0016779,GO:0046872,GO:0140806,GO:1990404;gene=sIR2;Parent=GCA000144955_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_001191944.1,SO:0001217,UniParc:UPI0001DDA561,UniRef:UniRef100_UPI0001DDA561,UniRef:UniRef50_A0A0H3JQ59,UniRef:UniRef90_A0A0H3JQ59;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	356367	357389	.	+	.	ID=GCA000144955_00308_gene;locus_tag=GCA000144955_00308;gene=lplA
contig_1	Pyrodigal	CDS	356367	357389	.	+	0	ID=GCA000144955_00308;Name=Lipoate--protein ligase 2;locus_tag=GCA000144955_00308;product=Lipoate--protein ligase 2;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000144955_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000280793.1,SO:0001217,UniParc:UPI0001DDA562,UniRef:UniRef100_UPI0001DDA562,UniRef:UniRef50_A0A0H3JX98,UniRef:UniRef90_A0A0H3JX98;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	357533	358879	.	-	.	ID=GCA000144955_00309_gene;locus_tag=GCA000144955_00309;gene=ulaA
contig_1	Pyrodigal	CDS	357533	358879	.	-	0	ID=GCA000144955_00309;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA000144955_00309;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0009401;gene=ulaA;Parent=GCA000144955_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3037,COG:G,KEGG:K03475,RefSeq:WP_001147995.1,SO:0001217,UniParc:UPI0001DDA563,UniRef:UniRef100_UPI0001DDA563,UniRef:UniRef50_A0A088T0Z9,UniRef:UniRef90_A0A454H3A5
contig_1	Pyrodigal	gene	358894	359178	.	-	.	ID=GCA000144955_00310_gene;locus_tag=GCA000144955_00310;gene=sgaB
contig_1	Pyrodigal	CDS	358894	359178	.	-	0	ID=GCA000144955_00310;Name=PTS lactose transporter subunit IIB;locus_tag=GCA000144955_00310;product=PTS lactose transporter subunit IIB;gene=sgaB;Parent=GCA000144955_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000699537.1,SO:0001217,UniParc:UPI00005FE219,UniRef:UniRef100_A0A2S6D6E6,UniRef:UniRef50_A0A2S6D6E6,UniRef:UniRef90_A0A2S6D6E6
contig_1	Pyrodigal	gene	359180	359623	.	-	.	ID=GCA000144955_00311_gene;locus_tag=GCA000144955_00311;gene=ptsN
contig_1	Pyrodigal	CDS	359180	359623	.	-	0	ID=GCA000144955_00311;Name=Ascorbate-specific PTS system EIIA component;locus_tag=GCA000144955_00311;product=Ascorbate-specific PTS system EIIA component;gene=ptsN;Parent=GCA000144955_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000050764.1,SO:0001217,UniParc:UPI0001DDA564,UniRef:UniRef100_UPI0001DDA564,UniRef:UniRef50_A0A391DBH8,UniRef:UniRef90_A0A391DBH8
contig_1	Pyrodigal	gene	359628	361583	.	-	.	ID=GCA000144955_00312_gene;locus_tag=GCA000144955_00312;gene=bglG
contig_1	Pyrodigal	CDS	359628	361583	.	-	0	ID=GCA000144955_00312;Name=BglG family transcription antiterminator;locus_tag=GCA000144955_00312;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000144955_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_000954276.1,SO:0001217,UniParc:UPI0001DDA565,UniRef:UniRef100_UPI0001DDA565,UniRef:UniRef50_A0A391EL22,UniRef:UniRef90_A0A391EL22
contig_1	Pyrodigal	gene	361795	362214	.	+	.	ID=GCA000144955_00313_gene;locus_tag=GCA000144955_00313;gene=mepR
contig_1	Pyrodigal	CDS	361795	362214	.	+	0	ID=GCA000144955_00313;Name=multidrug efflux transporter transcriptional repressor MepR;locus_tag=GCA000144955_00313;product=multidrug efflux transporter transcriptional repressor MepR;gene=mepR;Parent=GCA000144955_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000397416,COG:COG1846,COG:K,KEGG:K18909,RefSeq:WP_000397414.1,SO:0001217,UniParc:UPI0001DDA566,UniRef:UniRef100_UPI0001DDA566,UniRef:UniRef50_Q2G141,UniRef:UniRef90_Q2G141
contig_1	Pyrodigal	gene	362321	363676	.	+	.	ID=GCA000144955_00314_gene;locus_tag=GCA000144955_00314;gene=mepA
contig_1	Pyrodigal	CDS	362321	363676	.	+	0	ID=GCA000144955_00314;Name=multidrug efflux MATE transporter MepA;locus_tag=GCA000144955_00314;product=multidrug efflux MATE transporter MepA;Dbxref=GO:0005886,GO:0015297,GO:0042910,GO:0046677;gene=mepA;Parent=GCA000144955_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0534,COG:V,KEGG:K18908,NCBIProtein:BAB41547.1,RefSeq:WP_000651046.1,SO:0001217,UniParc:UPI0001DDA567,UniRef:UniRef100_UPI0001DDA567,UniRef:UniRef50_Q2G140,UniRef:UniRef90_Q2G140
contig_1	Pyrodigal	gene	363779	364219	.	+	.	ID=GCA000144955_00315_gene;locus_tag=GCA000144955_00315
contig_1	Pyrodigal	CDS	363779	364219	.	+	0	ID=GCA000144955_00315;Name=Endonuclease;locus_tag=GCA000144955_00315;product=Endonuclease;Parent=GCA000144955_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000278308.1,SO:0001217,UniParc:UPI0001DDA568,UniRef:UniRef100_UPI0001DDA568,UniRef:UniRef50_Q2G139,UniRef:UniRef90_A0A2D1CK39
contig_1	Pyrodigal	gene	364303	365661	.	-	.	ID=GCA000144955_00316_gene;locus_tag=GCA000144955_00316;gene=glpT
contig_1	Pyrodigal	CDS	364303	365661	.	-	0	ID=GCA000144955_00316;Name=glycerol-3-phosphate transporter;locus_tag=GCA000144955_00316;product=glycerol-3-phosphate transporter;Dbxref=GO:0015169,GO:0015794,GO:0016020;gene=glpT;Parent=GCA000144955_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K02445,RefSeq:WP_001010109.1,SO:0001217,UniParc:UPI0001DDA569,UniRef:UniRef100_UPI0001DDA569,UniRef:UniRef50_Q9HTV5,UniRef:UniRef90_Q2G138
contig_1	Pyrodigal	gene	365972	366898	.	+	.	ID=GCA000144955_00317_gene;locus_tag=GCA000144955_00317;gene=gloA
contig_1	Pyrodigal	CDS	365972	366898	.	+	0	ID=GCA000144955_00317;Name=Lactoylglutathione lyase;locus_tag=GCA000144955_00317;product=Lactoylglutathione lyase;gene=gloA;Parent=GCA000144955_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_001028209.1,SO:0001217,UniParc:UPI0001DDA56A,UniRef:UniRef100_UPI0001DDA56A,UniRef:UniRef50_A0A077UG87,UniRef:UniRef90_A0A077UG87
contig_1	Pyrodigal	gene	366912	367973	.	+	.	ID=GCA000144955_00318_gene;locus_tag=GCA000144955_00318;gene=ssuD
contig_1	Pyrodigal	CDS	366912	367973	.	+	0	ID=GCA000144955_00318;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000144955_00318;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000144955_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_001086107.1,SO:0001217,UniParc:UPI0001DDA56B,UniRef:UniRef100_UPI0001DDA56B,UniRef:UniRef50_A0A391E2C4,UniRef:UniRef90_A0A391E2C4
contig_1	Pyrodigal	gene	367984	368553	.	+	.	ID=GCA000144955_00319_gene;locus_tag=GCA000144955_00319;gene=ssuE
contig_1	Pyrodigal	CDS	367984	368553	.	+	0	ID=GCA000144955_00319;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000144955_00319;product=FMN-dependent NADPH-azoreductase;gene=ssuE;Parent=GCA000144955_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,SO:0001217,UniRef:UniRef50_A0A390B1M0,UniRef:UniRef90_A0A390B1M0
contig_1	Pyrodigal	gene	368613	369608	.	-	.	ID=GCA000144955_00320_gene;locus_tag=GCA000144955_00320;gene=yeiH
contig_1	Pyrodigal	CDS	368613	369608	.	-	0	ID=GCA000144955_00320;Name=UPF0324 membrane protein SACOL0411;locus_tag=GCA000144955_00320;product=UPF0324 membrane protein SACOL0411;Dbxref=GO:0005886;gene=yeiH;Parent=GCA000144955_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,RefSeq:WP_000157623.1,SO:0001217,UniParc:UPI0001DDA56D,UniRef:UniRef100_UPI0001DDA56D,UniRef:UniRef50_Q5HRT2,UniRef:UniRef90_Q7A7M5
contig_1	Pyrodigal	gene	369913	370458	.	+	.	ID=GCA000144955_00321_gene;locus_tag=GCA000144955_00321;gene=rimL
contig_1	Pyrodigal	CDS	369913	370458	.	+	0	ID=GCA000144955_00321;Name=50S ribosomal protein L7 serine acetyltransferase;locus_tag=GCA000144955_00321;product=50S ribosomal protein L7 serine acetyltransferase;gene=rimL;Parent=GCA000144955_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000467632.1,SO:0001217,UniParc:UPI0001DDA56E,UniRef:UniRef100_UPI0001DDA56E,UniRef:UniRef50_A0A2S6DUP1,UniRef:UniRef90_A0A2S6DUP1
contig_1	Pyrodigal	gene	370726	371580	.	+	.	ID=GCA000144955_00322_gene;locus_tag=GCA000144955_00322;gene=efeO
contig_1	Pyrodigal	CDS	370726	371580	.	+	0	ID=GCA000144955_00322;Name=iron uptake system protein EfeO;locus_tag=GCA000144955_00322;product=iron uptake system protein EfeO;Dbxref=GO:0005886,GO:0006826;gene=efeO;Parent=GCA000144955_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2822,COG:P,KEGG:K07224,RefSeq:WP_000737203.1,SO:0001217,UniParc:UPI0001DDA56F,UniRef:UniRef100_UPI0001DDA56F,UniRef:UniRef50_Q4L8N2,UniRef:UniRef90_Q2G131
contig_1	Pyrodigal	gene	371577	372806	.	+	.	ID=GCA000144955_00323_gene;locus_tag=GCA000144955_00323;gene=efeB
contig_1	Pyrodigal	CDS	371577	372806	.	+	0	ID=GCA000144955_00323;Name=iron uptake transporter deferrochelatase/peroxidase subunit;locus_tag=GCA000144955_00323;product=iron uptake transporter deferrochelatase/peroxidase subunit;Dbxref=GO:0004601,GO:0020037,GO:0033212;gene=efeB;Parent=GCA000144955_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2837,COG:P,KEGG:K16301,RefSeq:WP_000186232.1,SO:0001217,UniParc:UPI0001DDA570,UniRef:UniRef100_UPI0001DDA570,UniRef:UniRef50_A0A390V9S3,UniRef:UniRef90_A0A390V9S3;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	372787	374499	.	+	.	ID=GCA000144955_00324_gene;locus_tag=GCA000144955_00324;gene=fTR1
contig_1	Pyrodigal	CDS	372787	374499	.	+	0	ID=GCA000144955_00324;Name=FTR1 family iron permease;locus_tag=GCA000144955_00324;product=FTR1 family iron permease;gene=fTR1;Parent=GCA000144955_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0672,COG:P,RefSeq:WP_000683612.1,SO:0001217,UniParc:UPI0001DDA571,UniRef:UniRef100_UPI0001DDA571,UniRef:UniRef50_A0A4Z1BRH1,UniRef:UniRef90_Q2G129
contig_1	Pyrodigal	gene	374591	375289	.	-	.	ID=GCA000144955_00325_gene;locus_tag=GCA000144955_00325;gene=tatC
contig_1	Pyrodigal	CDS	374591	375289	.	-	0	ID=GCA000144955_00325;Name=twin-arginine translocase subunit TatC;locus_tag=GCA000144955_00325;product=twin-arginine translocase subunit TatC;Dbxref=GO:0005886,GO:0015628;gene=tatC;Parent=GCA000144955_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,RefSeq:WP_014532733.1,SO:0001217,UniParc:UPI0001DDA572,UniRef:UniRef100_UPI0001DDA572,UniRef:UniRef50_A0A2S6D619,UniRef:UniRef90_A0A6B5BEK4
contig_1	Pyrodigal	gene	375309	375527	.	-	.	ID=GCA000144955_00326_gene;locus_tag=GCA000144955_00326;gene=tatA
contig_1	Pyrodigal	CDS	375309	375527	.	-	0	ID=GCA000144955_00326;Name=Sec-independent protein translocase protein TatA;locus_tag=GCA000144955_00326;product=Sec-independent protein translocase protein TatA;gene=tatA;Parent=GCA000144955_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,SO:0001217,UniRef:UniRef50_A0A380FX86,UniRef:UniRef90_A0AAN1ZPU7
contig_1	Pyrodigal	gene	375635	376024	.	-	.	ID=GCA000144955_00327_gene;locus_tag=GCA000144955_00327;gene=ybcV
contig_1	Pyrodigal	CDS	375635	376024	.	-	0	ID=GCA000144955_00327;Name=DUF1398 domain-containing protein;locus_tag=GCA000144955_00327;product=DUF1398 domain-containing protein;gene=ybcV;Parent=GCA000144955_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5562,COG:X,RefSeq:WP_000886014.1,SO:0001217,UniParc:UPI0001DDA574,UniRef:UniRef100_UPI0001DDA574,UniRef:UniRef50_Q2G126,UniRef:UniRef90_Q2G126
contig_1	Pyrodigal	gene	376299	376502	.	+	.	ID=GCA000144955_00328_gene;locus_tag=GCA000144955_00328;gene=xRE
contig_1	Pyrodigal	CDS	376299	376502	.	+	0	ID=GCA000144955_00328;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_00328;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000144955_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001246007.1,SO:0001217,UniParc:UPI0001DA2248,UniRef:UniRef100_A0A0D1IC98,UniRef:UniRef50_Q2G1V7,UniRef:UniRef90_Q2G1V7
contig_1	Pyrodigal	gene	376499	377212	.	+	.	ID=GCA000144955_00329_gene;locus_tag=GCA000144955_00329
contig_1	Pyrodigal	CDS	376499	377212	.	+	0	ID=GCA000144955_00329;Name=DUF3169 domain-containing protein;locus_tag=GCA000144955_00329;product=DUF3169 domain-containing protein;Parent=GCA000144955_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000698764.1,SO:0001217,UniParc:UPI0001DDA575,UniRef:UniRef100_UPI0001DDA575,UniRef:UniRef50_Q2G1V5,UniRef:UniRef90_Q2G1V5
contig_1	Pyrodigal	gene	377237	378079	.	+	.	ID=GCA000144955_00330_gene;locus_tag=GCA000144955_00330;gene=rbbA
contig_1	Pyrodigal	CDS	377237	378079	.	+	0	ID=GCA000144955_00330;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000144955_00330;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=rbbA;Parent=GCA000144955_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000209550.1,SO:0001217,UniParc:UPI0001DDA576,UniRef:UniRef100_UPI0001DDA576,UniRef:UniRef50_A0A1D4LL40,UniRef:UniRef90_A0A390TZ70
contig_1	Pyrodigal	gene	378079	378708	.	+	.	ID=GCA000144955_00331_gene;locus_tag=GCA000144955_00331
contig_1	Pyrodigal	CDS	378079	378708	.	+	0	ID=GCA000144955_00331;Name=ABC-2 transporter permease;locus_tag=GCA000144955_00331;product=ABC-2 transporter permease;Parent=GCA000144955_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000677716.1,SO:0001217,UniParc:UPI0001DDA577,UniRef:UniRef100_UPI0001DDA577,UniRef:UniRef50_Q2G1V6,UniRef:UniRef90_Q2G1V6
contig_1	Pyrodigal	gene	379074	380150	.	-	.	ID=GCA000144955_00332_gene;locus_tag=GCA000144955_00332;gene=ltrA
contig_1	Pyrodigal	CDS	379074	380150	.	-	0	ID=GCA000144955_00332;Name=Low temperature requirement protein A;locus_tag=GCA000144955_00332;product=Low temperature requirement protein A;gene=ltrA;Parent=GCA000144955_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4292,COG:S,SO:0001217,UniRef:UniRef50_Q2G1V3,UniRef:UniRef90_Q2G1V3
contig_1	Pyrodigal	gene	380728	381909	.	+	.	ID=GCA000144955_00333_gene;locus_tag=GCA000144955_00333;gene=paaJ
contig_1	Pyrodigal	CDS	380728	381909	.	+	0	ID=GCA000144955_00333;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000144955_00333;product=putative acetyl-CoA acyltransferase;Dbxref=GO:0003985,GO:0005737;gene=paaJ;Parent=GCA000144955_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_000199082.1,SO:0001217,UniParc:UPI0001DDA579,UniRef:UniRef100_UPI0001DDA579,UniRef:UniRef50_Q2G124,UniRef:UniRef90_Q2G124;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	381992	382744	.	-	.	ID=GCA000144955_00334_gene;locus_tag=GCA000144955_00334
contig_1	Pyrodigal	CDS	381992	382744	.	-	0	ID=GCA000144955_00334;Name=Cyclase family protein;locus_tag=GCA000144955_00334;product=Cyclase family protein;Parent=GCA000144955_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1878,COG:E,RefSeq:WP_000195917.1,SO:0001217,UniParc:UPI0001DDA57A,UniRef:UniRef100_UPI0001DDA57A,UniRef:UniRef50_Q2G123,UniRef:UniRef90_Q2G123
contig_1	Pyrodigal	gene	382787	385015	.	-	.	ID=GCA000144955_00335_gene;locus_tag=GCA000144955_00335;gene=metE
contig_1	Pyrodigal	CDS	382787	385015	.	-	0	ID=GCA000144955_00335;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000144955_00335;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0009086,GO:0032259;gene=metE;Parent=GCA000144955_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,RefSeq:WP_000207630.1,SO:0001217,UniParc:UPI0001DDA57B,UniRef:UniRef100_UPI0001DDA57B,UniRef:UniRef50_Q8CWX6,UniRef:UniRef90_Q2G122;ec_number=2.1.1.14
contig_1	Pyrodigal	gene	385012	386853	.	-	.	ID=GCA000144955_00336_gene;locus_tag=GCA000144955_00336;gene=metF
contig_1	Pyrodigal	CDS	385012	386853	.	-	0	ID=GCA000144955_00336;Name=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;locus_tag=GCA000144955_00336;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;gene=metF;Parent=GCA000144955_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_000077331.1,SO:0001217,UniParc:UPI0001DDA57C,UniRef:UniRef100_UPI0001DDA57C,UniRef:UniRef50_A0A7U7JSP7,UniRef:UniRef90_A0A7U7JSP7;ec_number=2.1.1.10
contig_1	Pyrodigal	gene	386822	387982	.	-	.	ID=GCA000144955_00337_gene;locus_tag=GCA000144955_00337;gene=metC
contig_1	Pyrodigal	CDS	386822	387982	.	-	0	ID=GCA000144955_00337;Name=cystathionine beta-lyase MetC;locus_tag=GCA000144955_00337;product=cystathionine beta-lyase MetC;Dbxref=GO:0009086,GO:0030170,GO:0047804;gene=metC;Parent=GCA000144955_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000175839.1,SO:0001217,UniParc:UPI0001DDA57D,UniRef:UniRef100_UPI0001DDA57D,UniRef:UniRef50_Q4L332,UniRef:UniRef90_A0A7U7JSH1;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	387979	389082	.	-	.	ID=GCA000144955_00338_gene;locus_tag=GCA000144955_00338;gene=metC
contig_1	Pyrodigal	CDS	387979	389082	.	-	0	ID=GCA000144955_00338;Name=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;locus_tag=GCA000144955_00338;product=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;gene=metC;Parent=GCA000144955_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000655700.1,SO:0001217,UniParc:UPI0001DDA57E,UniRef:UniRef100_UPI0001DDA57E,UniRef:UniRef50_A0A7U7JSJ6,UniRef:UniRef90_A0A7U7JSJ6
contig_1	Infernal	regulatory_region	389145	389514	9.3e-14	-	.	ID=BPGLLONNDN_169;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	389743	390588	.	+	.	ID=GCA000144955_00339_gene;locus_tag=GCA000144955_00339;gene=spo0J
contig_1	Pyrodigal	CDS	389743	390588	.	+	0	ID=GCA000144955_00339;Name=Chromosome/plasmid partitioning protein ParB;locus_tag=GCA000144955_00339;product=Chromosome/plasmid partitioning protein ParB;gene=spo0J;Parent=GCA000144955_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_044025861.1,SO:0001217,UniParc:UPI000310203D,UniRef:UniRef100_UPI000310203D,UniRef:UniRef50_A0A390ZJY4,UniRef:UniRef90_A0A390ZJY4
contig_1	Pyrodigal	gene	390745	391626	.	+	.	ID=GCA000144955_00340_gene;locus_tag=GCA000144955_00340;gene=mscS
contig_1	Pyrodigal	CDS	390745	391626	.	+	0	ID=GCA000144955_00340;Name=Mechanosensitive ion channel family protein;locus_tag=GCA000144955_00340;product=Mechanosensitive ion channel family protein;gene=mscS;Parent=GCA000144955_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0668,COG:M,RefSeq:WP_001077599.1,SO:0001217,UniParc:UPI0001DDA70F,UniRef:UniRef100_UPI0001DDA70F,UniRef:UniRef50_Q2G117,UniRef:UniRef90_Q2G117
contig_1	Pyrodigal	gene	391656	391859	.	+	.	ID=GCA000144955_00341_gene;locus_tag=GCA000144955_00341
contig_1	Pyrodigal	CDS	391656	391859	.	+	0	ID=GCA000144955_00341;Name=Cytosolic protein;locus_tag=GCA000144955_00341;product=Cytosolic protein;Parent=GCA000144955_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4481,COG:S,RefSeq:WP_000157345.1,SO:0001217,UniParc:UPI0000054563,UniRef:UniRef100_Q2G116,UniRef:UniRef50_Q2G116,UniRef:UniRef90_Q2G116
contig_1	Pyrodigal	gene	391871	392968	.	+	.	ID=GCA000144955_00342_gene;locus_tag=GCA000144955_00342;gene=ychF
contig_1	Pyrodigal	CDS	391871	392968	.	+	0	ID=GCA000144955_00342;Name=redox-regulated ATPase YchF;locus_tag=GCA000144955_00342;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0016887;gene=ychF;Parent=GCA000144955_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_001218734.1,SO:0001217,UniParc:UPI0001DDA710,UniRef:UniRef100_UPI0001DDA710,UniRef:UniRef50_P0ABU2,UniRef:UniRef90_A0A654CN84
contig_1	Pyrodigal	gene	393054	393245	.	-	.	ID=GCA000144955_00343_gene;locus_tag=GCA000144955_00343
contig_1	Pyrodigal	CDS	393054	393245	.	-	0	ID=GCA000144955_00343;Name=hypothetical protein;locus_tag=GCA000144955_00343;product=hypothetical protein;Parent=GCA000144955_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052484.1,SO:0001217,UniParc:UPI00000CAAD4,UniRef:UniRef100_A0A389XNG1,UniRef:UniRef50_Q2G114,UniRef:UniRef90_Q2G114
contig_1	Pyrodigal	gene	393489	393785	.	+	.	ID=GCA000144955_00344_gene;locus_tag=GCA000144955_00344;gene=rpsF
contig_1	Pyrodigal	CDS	393489	393785	.	+	0	ID=GCA000144955_00344;Name=30S ribosomal protein S6;locus_tag=GCA000144955_00344;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0022627,GO:0070181,GO:1990904;gene=rpsF;Parent=GCA000144955_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_001261460.1,SO:0001217,UniParc:UPI0000048022,UniRef:UniRef100_Q2G113,UniRef:UniRef50_P21468,UniRef:UniRef90_Q2G113
contig_1	Pyrodigal	gene	393806	394309	.	+	.	ID=GCA000144955_00345_gene;locus_tag=GCA000144955_00345;gene=ssb
contig_1	Pyrodigal	CDS	393806	394309	.	+	0	ID=GCA000144955_00345;Name=Single-stranded DNA-binding protein 1;locus_tag=GCA000144955_00345;product=Single-stranded DNA-binding protein 1;Dbxref=GO:0003697,GO:0006260,GO:0006281,GO:0006310,GO:0009295;gene=ssb;Parent=GCA000144955_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000934799.1,SO:0001217,UniParc:UPI0000054560,UniRef:UniRef100_Q5HIS8,UniRef:UniRef50_Q5HIS8,UniRef:UniRef90_Q5HIS8
contig_1	Pyrodigal	gene	394361	394603	.	+	.	ID=GCA000144955_00346_gene;locus_tag=GCA000144955_00346;gene=rpsR
contig_1	Pyrodigal	CDS	394361	394603	.	+	0	ID=GCA000144955_00346;Name=30S ribosomal protein S18;locus_tag=GCA000144955_00346;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000144955_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_000897044.1,SO:0001217,UniParc:UPI000004802A,UniRef:UniRef100_Q2G111,UniRef:UniRef50_P21475,UniRef:UniRef90_Q2G111
contig_1	Infernal	gene	394774	394869	.	-	.	ID=GCA000144955_00347_gene;locus_tag=GCA000144955_00347;gene=sau-5971
contig_1	Infernal	ncRNA	394774	394869	1.1e-20	-	.	ID=GCA000144955_00347;Name=Staphylococcus sRNA sau-5971;locus_tag=GCA000144955_00347;product=Staphylococcus sRNA sau-5971;Dbxref=RFAM:RF02397;Parent=GCA000144955_00347_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02397
contig_1	Pyrodigal	gene	394880	395854	.	-	.	ID=GCA000144955_00348_gene;locus_tag=GCA000144955_00348;gene=abiF
contig_1	Pyrodigal	CDS	394880	395854	.	-	0	ID=GCA000144955_00348;Name=Abi family protein;locus_tag=GCA000144955_00348;product=Abi family protein;gene=abiF;Parent=GCA000144955_00348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4823,COG:V,SO:0001217,UniRef:UniRef50_Q2G110,UniRef:UniRef90_Q2G110
contig_1	Pyrodigal	gene	396778	397389	.	+	.	ID=GCA000144955_00349_gene;locus_tag=GCA000144955_00349;gene=selX
contig_1	Pyrodigal	CDS	396778	397389	.	+	0	ID=GCA000144955_00349;Name=staphylococcal enterotoxin-like toxin X;locus_tag=GCA000144955_00349;product=staphylococcal enterotoxin-like toxin X;Dbxref=GO:0005576;gene=selX;Parent=GCA000144955_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AEI60187.1,RefSeq:WP_000475323.1,SO:0001217,UniParc:UPI0001DDA713,UniRef:UniRef100_UPI0001DDA713,UniRef:UniRef50_G0Z026,UniRef:UniRef90_G0Z026
contig_1	Pyrodigal	gene	397758	398126	.	+	.	ID=GCA000144955_00350_gene;locus_tag=GCA000144955_00350;gene=yxeA
contig_1	Pyrodigal	CDS	397758	398126	.	+	0	ID=GCA000144955_00350;Name=YxeA family protein;locus_tag=GCA000144955_00350;product=YxeA family protein;gene=yxeA;Parent=GCA000144955_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000849157.1,SO:0001217,UniParc:UPI0001DDA714,UniRef:UniRef100_UPI0001DDA714,UniRef:UniRef50_Q2G106,UniRef:UniRef90_A0AA40MJ51
contig_1	Pyrodigal	gene	398307	398879	.	+	.	ID=GCA000144955_00351_gene;locus_tag=GCA000144955_00351;gene=ykoI
contig_1	Pyrodigal	CDS	398307	398879	.	+	0	ID=GCA000144955_00351;Name=PepSY domain-containing protein;locus_tag=GCA000144955_00351;product=PepSY domain-containing protein;gene=ykoI;Parent=GCA000144955_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3212,COG:O,RefSeq:WP_000769722.1,SO:0001217,UniParc:UPI00000D76CF,UniRef:UniRef100_W8U6L2,UniRef:UniRef50_Q2G105,UniRef:UniRef90_Q2G105
contig_1	Pyrodigal	gene	399017	399280	.	-	.	ID=GCA000144955_00352_gene;locus_tag=GCA000144955_00352
contig_1	Pyrodigal	CDS	399017	399280	.	-	0	ID=GCA000144955_00352;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_00352;product=HTH cro/C1-type domain-containing protein;Parent=GCA000144955_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001055897.1,SO:0001217,UniParc:UPI0000054559,UniRef:UniRef100_Q2G104,UniRef:UniRef50_Q2G104,UniRef:UniRef90_Q2G104
contig_1	Pyrodigal	gene	399574	399828	.	+	.	ID=GCA000144955_00353_gene;locus_tag=GCA000144955_00353;gene=yeaQ
contig_1	Pyrodigal	CDS	399574	399828	.	+	0	ID=GCA000144955_00353;Name=GlsB/YeaQ/YmgE family stress response membrane protein;locus_tag=GCA000144955_00353;product=GlsB/YeaQ/YmgE family stress response membrane protein;gene=yeaQ;Parent=GCA000144955_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2261,COG:R,RefSeq:WP_000466746.1,SO:0001217,UniParc:UPI00003B13E5,UniRef:UniRef100_A0A7Z7QXB6,UniRef:UniRef50_Q2G103,UniRef:UniRef90_Q2G103
contig_1	Infernal	gene	400004	400107	.	-	.	ID=GCA000144955_00354_gene;locus_tag=GCA000144955_00354;gene=sRNA71
contig_1	Infernal	ncRNA	400004	400107	5.5e-16	-	.	ID=GCA000144955_00354;Name=Staphylococcus sRNA71 small RNA;locus_tag=GCA000144955_00354;product=Staphylococcus sRNA71 small RNA;Dbxref=RFAM:RF03534;Parent=GCA000144955_00354_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF03534
contig_1	Pyrodigal	gene	400254	400835	.	+	.	ID=GCA000144955_00355_gene;locus_tag=GCA000144955_00355;gene=phoE
contig_1	Pyrodigal	CDS	400254	400835	.	+	0	ID=GCA000144955_00355;Name=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);locus_tag=GCA000144955_00355;product=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);gene=phoE;Parent=GCA000144955_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_000158376.1,SO:0001217,UniParc:UPI0001B3AD9C,UniRef:UniRef100_A0A0U1MXC0,UniRef:UniRef50_A0A380CV51,UniRef:UniRef90_Q2G101
contig_1	Pyrodigal	gene	400901	401287	.	-	.	ID=GCA000144955_00356_gene;locus_tag=GCA000144955_00356
contig_1	Pyrodigal	CDS	400901	401287	.	-	0	ID=GCA000144955_00356;Name=hypothetical protein;locus_tag=GCA000144955_00356;product=hypothetical protein;Parent=GCA000144955_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2K4AJS7,UniRef:UniRef90_Q2G100
contig_1	Pyrodigal	gene	401346	401480	.	+	.	ID=GCA000144955_00357_gene;locus_tag=GCA000144955_00357
contig_1	Pyrodigal	CDS	401346	401480	.	+	0	ID=GCA000144955_00357;Name=hypothetical protein;locus_tag=GCA000144955_00357;product=hypothetical protein;Parent=GCA000144955_00357_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	401549	402175	.	-	.	ID=GCA000144955_00358_gene;locus_tag=GCA000144955_00358
contig_1	Pyrodigal	CDS	401549	402175	.	-	0	ID=GCA000144955_00358;Name=NDxxF motif lipoprotein;locus_tag=GCA000144955_00358;product=NDxxF motif lipoprotein;Parent=GCA000144955_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000746686.1,SO:0001217,UniParc:UPI0001DDA718,UniRef:UniRef100_UPI0001DDA718,UniRef:UniRef50_Q4L374,UniRef:UniRef90_Q2G0Z9
contig_1	Pyrodigal	gene	402247	403866	.	-	.	ID=GCA000144955_00359_gene;locus_tag=GCA000144955_00359
contig_1	Pyrodigal	CDS	402247	403866	.	-	0	ID=GCA000144955_00359;Name=Rho termination factor N-terminal domain-containing protein;locus_tag=GCA000144955_00359;product=Rho termination factor N-terminal domain-containing protein;Parent=GCA000144955_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000887775.1,SO:0001217,UniParc:UPI0001DDA719,UniRef:UniRef100_UPI0001DDA719,UniRef:UniRef50_A0A0H3JUH4,UniRef:UniRef90_A0A0H3JUH4
contig_1	Pyrodigal	gene	403981	405504	.	-	.	ID=GCA000144955_00360_gene;locus_tag=GCA000144955_00360;gene=ahpF
contig_1	Pyrodigal	CDS	403981	405504	.	-	0	ID=GCA000144955_00360;Name=alkyl hydroperoxide reductase subunit F;locus_tag=GCA000144955_00360;product=alkyl hydroperoxide reductase subunit F;Dbxref=GO:0000302,GO:0008785,GO:0016668,GO:0050660,GO:0051287,GO:0102039;gene=ahpF;Parent=GCA000144955_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3634,COG:V,RefSeq:WP_000930499.1,SO:0001217,UniParc:UPI0001DDA71A,UniRef:UniRef100_UPI0001DDA71A,UniRef:UniRef50_O05204,UniRef:UniRef90_O05204;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	405520	406089	.	-	.	ID=GCA000144955_00361_gene;locus_tag=GCA000144955_00361;gene=ahpC
contig_1	Pyrodigal	CDS	405520	406089	.	-	0	ID=GCA000144955_00361;Name=alkyl hydroperoxide reductase subunit C;locus_tag=GCA000144955_00361;product=alkyl hydroperoxide reductase subunit C;Dbxref=GO:0005829,GO:0006979,GO:0008379,GO:0033554,GO:0042744,GO:0045454,GO:0102039;gene=ahpC;Parent=GCA000144955_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0450,COG:V,KEGG:K24119,RefSeq:WP_000052781.1,SO:0001217,UniParc:UPI0000054552,UniRef:UniRef100_P0A0B7,UniRef:UniRef50_K0J4Q8,UniRef:UniRef90_P0A0B7;ec_number=1.11.1.26
contig_1	Pyrodigal	gene	406581	407336	.	+	.	ID=GCA000144955_00362_gene;locus_tag=GCA000144955_00362;gene=nfsA
contig_1	Pyrodigal	CDS	406581	407336	.	+	0	ID=GCA000144955_00362;Name=oxygen-insensitive NADPH nitroreductase;locus_tag=GCA000144955_00362;product=oxygen-insensitive NADPH nitroreductase;Dbxref=GO:0016491;gene=nfsA;Parent=GCA000144955_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_001279732.1,SO:0001217,UniParc:UPI0001DDA71B,UniRef:UniRef100_UPI0001DDA71B,UniRef:UniRef50_Q2G0Z5,UniRef:UniRef90_Q2G0Z5;ec_number=1.6.-.-
contig_1	Pyrodigal	gene	407416	408804	.	-	.	ID=GCA000144955_00363_gene;locus_tag=GCA000144955_00363;gene=tcyP
contig_1	Pyrodigal	CDS	407416	408804	.	-	0	ID=GCA000144955_00363;Name=L-cystine uptake protein TcyP;locus_tag=GCA000144955_00363;product=L-cystine uptake protein TcyP;gene=tcyP;Parent=GCA000144955_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1823,COG:E,RefSeq:WP_000991004.1,SO:0001217,UniParc:UPI0001C33A35,UniRef:UniRef100_UPI0001C33A35,UniRef:UniRef50_P54596,UniRef:UniRef90_A0A7U7JSI4
contig_1	Pyrodigal	gene	409783	410739	.	-	.	ID=GCA000144955_00364_gene;locus_tag=GCA000144955_00364
contig_1	Pyrodigal	CDS	409783	410739	.	-	0	ID=GCA000144955_00364;Name=putative protein SAV0385;locus_tag=GCA000144955_00364;product=putative protein SAV0385;Parent=GCA000144955_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956156.1,SO:0001217,UniParc:UPI0001DDA71C,UniRef:UniRef100_UPI0001DDA71C,UniRef:UniRef50_P60855,UniRef:UniRef90_P60855
contig_1	Pyrodigal	gene	410857	411519	.	-	.	ID=GCA000144955_00365_gene;locus_tag=GCA000144955_00365
contig_1	Pyrodigal	CDS	410857	411519	.	-	0	ID=GCA000144955_00365;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00365;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000394698.1,SO:0001217,UniParc:UPI000005454C,UniRef:UniRef100_Q2G0Z1,UniRef:UniRef50_K9B354,UniRef:UniRef90_Q2G0Z1
contig_1	Pyrodigal	gene	411662	412069	.	-	.	ID=GCA000144955_00366_gene;locus_tag=GCA000144955_00366
contig_1	Pyrodigal	CDS	411662	412069	.	-	0	ID=GCA000144955_00366;Name=UPF0355 protein MW0363;locus_tag=GCA000144955_00366;product=UPF0355 protein MW0363;Parent=GCA000144955_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000763775.1,SO:0001217,UniParc:UPI0001DDA71D,UniRef:UniRef100_UPI0001DDA71D,UniRef:UniRef50_Q4L382,UniRef:UniRef90_Q99WJ2
contig_1	Infernal	regulatory_region	412249	412351	7.8e-11	+	.	ID=BPGLLONNDN_177;Name=Purine riboswitch aptamer;product=Purine riboswitch aptamer;Dbxref=RFAM:RF00167;inference=profile:Rfam:RF00167;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	412584	413162	.	+	.	ID=GCA000144955_00367_gene;locus_tag=GCA000144955_00367;gene=xpt
contig_1	Pyrodigal	CDS	412584	413162	.	+	0	ID=GCA000144955_00367;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000144955_00367;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000310,GO:0005737,GO:0006166,GO:0032265,GO:0043101,GO:0046110;gene=xpt;Parent=GCA000144955_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K03816,RefSeq:WP_000421410.1,SO:0001217,UniParc:UPI00000D77B2,UniRef:UniRef100_Q2G0Y9,UniRef:UniRef50_Q2G0Y9,UniRef:UniRef90_Q2G0Y9;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	413162	414430	.	+	.	ID=GCA000144955_00368_gene;locus_tag=GCA000144955_00368;gene=uraA
contig_1	Pyrodigal	CDS	413162	414430	.	+	0	ID=GCA000144955_00368;Name=Xanthine permease;locus_tag=GCA000144955_00368;product=Xanthine permease;gene=uraA;Parent=GCA000144955_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_000793021.1,SO:0001217,UniParc:UPI0001DDA71E,UniRef:UniRef100_UPI0001DDA71E,UniRef:UniRef50_P42086,UniRef:UniRef90_A0A1J6I5H8
contig_1	Pyrodigal	gene	414468	415934	.	+	.	ID=GCA000144955_00369_gene;locus_tag=GCA000144955_00369;gene=guaB
contig_1	Pyrodigal	CDS	414468	415934	.	+	0	ID=GCA000144955_00369;Name=IMP dehydrogenase;locus_tag=GCA000144955_00369;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872;gene=guaB;Parent=GCA000144955_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3448,COG:T,KEGG:K00088,RefSeq:WP_000264071.1,SO:0001217,UniParc:UPI0000054548,UniRef:UniRef100_Q2G0Y7,UniRef:UniRef50_Q2G0Y7,UniRef:UniRef90_Q2G0Y7;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	415959	417500	.	+	.	ID=GCA000144955_00370_gene;locus_tag=GCA000144955_00370;gene=guaA
contig_1	Pyrodigal	CDS	415959	417500	.	+	0	ID=GCA000144955_00370;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000144955_00370;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA000144955_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,KEGG:K01951,RefSeq:WP_000366938.1,SO:0001217,UniParc:UPI0001DDA71F,UniRef:UniRef100_A0A7U7PXG6,UniRef:UniRef50_Q2G0Y6,UniRef:UniRef90_Q2G0Y6;ec_number=6.3.5.2
contig_1	Pyrodigal	gene	417613	418149	.	-	.	ID=GCA000144955_00371_gene;locus_tag=GCA000144955_00371
contig_1	Pyrodigal	CDS	417613	418149	.	-	0	ID=GCA000144955_00371;Name=Phage protein;locus_tag=GCA000144955_00371;product=Phage protein;Parent=GCA000144955_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000551641.1,SO:0001217,UniParc:UPI0001DDA720,UniRef:UniRef100_UPI0001DDA720,UniRef:UniRef50_Q2G0Y5,UniRef:UniRef90_Q2G0Y5
contig_1	Infernal	gene	418412	418509	.	-	.	ID=GCA000144955_00372_gene;locus_tag=GCA000144955_00372;gene=sau-63
contig_1	Infernal	ncRNA	418412	418509	1.2e-23	-	.	ID=GCA000144955_00372;Name=Staphylococcus sRNA sau-63;locus_tag=GCA000144955_00372;product=Staphylococcus sRNA sau-63;Dbxref=RFAM:RF02394;Parent=GCA000144955_00372_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02394
contig_1	Pyrodigal	gene	418541	419245	.	-	.	ID=GCA000144955_00373_gene;locus_tag=GCA000144955_00373;gene=mazF
contig_1	Pyrodigal	CDS	418541	419245	.	-	0	ID=GCA000144955_00373;Name=Endoribonuclease MazF;locus_tag=GCA000144955_00373;product=Endoribonuclease MazF;gene=mazF;Parent=GCA000144955_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000041872.1,SO:0001217,UniParc:UPI0001DDA721,UniRef:UniRef100_UPI0001DDA721,UniRef:UniRef50_A0A389Q5H3,UniRef:UniRef90_A0A389Q5H3
contig_1	Pyrodigal	gene	419883	420014	.	+	.	ID=GCA000144955_00374_gene;locus_tag=GCA000144955_00374
contig_1	Pyrodigal	CDS	419883	420014	.	+	0	ID=GCA000144955_00374;Name=hypothetical protein;locus_tag=GCA000144955_00374;product=hypothetical protein;Parent=GCA000144955_00374_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	419970	420296	.	-	.	ID=GCA000144955_00375_gene;locus_tag=GCA000144955_00375
contig_1	Pyrodigal	CDS	419970	420296	.	-	0	ID=GCA000144955_00375;Name=Transposase;locus_tag=GCA000144955_00375;product=Transposase;Parent=GCA000144955_00375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0U1MWZ8,UniRef:UniRef90_A0A0U1MWZ8
contig_1	Pyrodigal	gene	420557	420709	.	-	.	ID=GCA000144955_00376_gene;locus_tag=GCA000144955_00376
contig_1	Pyrodigal	CDS	420557	420709	.	-	0	ID=GCA000144955_00376;Name=hypothetical protein;locus_tag=GCA000144955_00376;product=hypothetical protein;Parent=GCA000144955_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248847.1,SO:0001217,UniParc:UPI0001DDA722,UniRef:UniRef100_A0AA40JPG8,UniRef:UniRef50_A0A6B1RMS0,UniRef:UniRef90_A0A6B1RMS0
contig_1	Infernal	regulatory_region	420956	421056	3.4e-17	+	.	ID=BPGLLONNDN_163;Name=azaaromatic riboswitch aptamer (yjdF RNA);product=azaaromatic riboswitch aptamer (yjdF RNA);Dbxref=RFAM:RF01764;inference=profile:Rfam:RF01764;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	421129	421404	.	+	.	ID=GCA000144955_00377_gene;locus_tag=GCA000144955_00377;pseudogene=unitary
contig_1	Pyrodigal	CDS	421129	421404	.	+	0	ID=GCA000144955_00377;Name=DUF2992 domain-containing protein;locus_tag=GCA000144955_00377;product=DUF2992 domain-containing protein;pseudogene=unitary;Parent=GCA000144955_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A654CMW8,UniRef:UniRef90_A0A5S9C387
contig_1	Pyrodigal	gene	421526	422008	.	+	.	ID=GCA000144955_00378_gene;locus_tag=GCA000144955_00378
contig_1	Pyrodigal	CDS	421526	422008	.	+	0	ID=GCA000144955_00378;Name=DUF523 domain-containing protein;locus_tag=GCA000144955_00378;product=DUF523 domain-containing protein;Parent=GCA000144955_00378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000600875.1,SO:0001217,UniParc:UPI0001DDA724,UniRef:UniRef100_UPI0001DDA724,UniRef:UniRef50_A0A1E3L6Q9,UniRef:UniRef90_A0AA40JNW8
contig_1	Pyrodigal	gene	422302	423756	.	-	.	ID=GCA000144955_00379_gene;locus_tag=GCA000144955_00379
contig_1	Pyrodigal	CDS	422302	423756	.	-	0	ID=GCA000144955_00379;Name=Transcriptional regulator;locus_tag=GCA000144955_00379;product=Transcriptional regulator;Parent=GCA000144955_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030868.1,SO:0001217,UniParc:UPI0001DDA725,UniRef:UniRef100_UPI0001DDA725,UniRef:UniRef50_N9NLL5,UniRef:UniRef90_A0A6B1RTN7
contig_1	Pyrodigal	gene	424268	424627	.	-	.	ID=GCA000144955_00380_gene;locus_tag=GCA000144955_00380
contig_1	Pyrodigal	CDS	424268	424627	.	-	0	ID=GCA000144955_00380;Name=DUF1304 domain-containing protein;locus_tag=GCA000144955_00380;product=DUF1304 domain-containing protein;Parent=GCA000144955_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3759,COG:S,KEGG:K08987,RefSeq:WP_001028551.1,SO:0001217,UniParc:UPI0001DDA726,UniRef:UniRef100_UPI0001DDA726,UniRef:UniRef50_Q2G0Y1,UniRef:UniRef90_Q2G0Y1
contig_1	Pyrodigal	gene	424646	425491	.	-	.	ID=GCA000144955_00381_gene;locus_tag=GCA000144955_00381;gene=ybjT
contig_1	Pyrodigal	CDS	424646	425491	.	-	0	ID=GCA000144955_00381;Name=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000144955_00381;product=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ybjT;Parent=GCA000144955_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024395.1,SO:0001217,UniParc:UPI0001DDA727,UniRef:UniRef100_UPI0001DDA727,UniRef:UniRef50_A0A0D0RS60,UniRef:UniRef90_A0A391A2R3
contig_1	Pyrodigal	gene	425858	426631	.	+	.	ID=GCA000144955_00382_gene;locus_tag=GCA000144955_00382
contig_1	Pyrodigal	CDS	425858	426631	.	+	0	ID=GCA000144955_00382;Name=superantigen-like protein SSL1;locus_tag=GCA000144955_00382;product=superantigen-like protein SSL1;Parent=GCA000144955_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11042,SO:0001217,UniRef:UniRef50_Q2G0X9,UniRef:UniRef90_UPI0002E46915
contig_1	Pyrodigal	gene	426884	427579	.	+	.	ID=GCA000144955_00383_gene;locus_tag=GCA000144955_00383
contig_1	Pyrodigal	CDS	426884	427579	.	+	0	ID=GCA000144955_00383;Name=superantigen-like protein SSL2;locus_tag=GCA000144955_00383;product=superantigen-like protein SSL2;Parent=GCA000144955_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000782831.1,SO:0001217,UniParc:UPI0001DDA729,UniRef:UniRef100_UPI0001DDA729,UniRef:UniRef50_Q2G0X8,UniRef:UniRef90_A0A7U7JSK2
contig_1	Pyrodigal	gene	427867	428712	.	+	.	ID=GCA000144955_00384_gene;locus_tag=GCA000144955_00384
contig_1	Pyrodigal	CDS	427867	428712	.	+	0	ID=GCA000144955_00384;Name=superantigen-like protein SSL4;locus_tag=GCA000144955_00384;product=superantigen-like protein SSL4;Parent=GCA000144955_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784618.1,SO:0001217,UniParc:UPI0001DDA72A,UniRef:UniRef100_UPI0001DDA72A,UniRef:UniRef50_A0A7U7JSN3,UniRef:UniRef90_UPI000A107341
contig_1	Pyrodigal	gene	429071	430003	.	+	.	ID=GCA000144955_00385_gene;locus_tag=GCA000144955_00385
contig_1	Pyrodigal	CDS	429071	430003	.	+	0	ID=GCA000144955_00385;Name=superantigen-like protein SSL4;locus_tag=GCA000144955_00385;product=superantigen-like protein SSL4;Parent=GCA000144955_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784620.1,SO:0001217,UniParc:UPI0001DDA72B,UniRef:UniRef100_UPI0001DDA72B,UniRef:UniRef50_A0A7U7JSN3,UniRef:UniRef90_UPI0001DDA72B
contig_1	Pyrodigal	gene	430368	431072	.	+	.	ID=GCA000144955_00386_gene;locus_tag=GCA000144955_00386;gene=ssl5
contig_1	Pyrodigal	CDS	430368	431072	.	+	0	ID=GCA000144955_00386;Name=superantigen-like protein SSL5;locus_tag=GCA000144955_00386;product=superantigen-like protein SSL5;Dbxref=GO:0005576;gene=ssl5;Parent=GCA000144955_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23587,RefSeq:WP_000784261.1,SO:0001217,UniParc:UPI0001DDA72C,UniRef:UniRef100_UPI0001DDA72C,UniRef:UniRef50_Q2G1S6,UniRef:UniRef90_Q2G1S6
contig_1	Pyrodigal	gene	431518	432213	.	+	.	ID=GCA000144955_00387_gene;locus_tag=GCA000144955_00387
contig_1	Pyrodigal	CDS	431518	432213	.	+	0	ID=GCA000144955_00387;Name=superantigen-like protein SSL6;locus_tag=GCA000144955_00387;product=superantigen-like protein SSL6;Parent=GCA000144955_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769805.1,SO:0001217,UniParc:UPI0001DDA72D,UniRef:UniRef100_UPI0001DDA72D,UniRef:UniRef50_Q2G1S5,UniRef:UniRef90_Q2G1S5
contig_1	Pyrodigal	gene	432624	433319	.	+	.	ID=GCA000144955_00388_gene;locus_tag=GCA000144955_00388
contig_1	Pyrodigal	CDS	432624	433319	.	+	0	ID=GCA000144955_00388;Name=superantigen-like protein SSL7;locus_tag=GCA000144955_00388;product=superantigen-like protein SSL7;Parent=GCA000144955_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769842.1,SO:0001217,UniParc:UPI0001DDA72E,UniRef:UniRef100_UPI0001DDA72E,UniRef:UniRef50_Q2G2Y0,UniRef:UniRef90_UPI0001DDA72E
contig_1	Pyrodigal	gene	433650	434348	.	+	.	ID=GCA000144955_00389_gene;locus_tag=GCA000144955_00389;gene=set23
contig_1	Pyrodigal	CDS	433650	434348	.	+	0	ID=GCA000144955_00389;Name=superantigen-like protein SSL8;locus_tag=GCA000144955_00389;product=superantigen-like protein SSL8;gene=set23;Parent=GCA000144955_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778485.1,SO:0001217,UniParc:UPI0001DDA8D4,UniRef:UniRef100_UPI0001DDA8D4,UniRef:UniRef50_Q2G2X9,UniRef:UniRef90_Q2G2X9,VFDB:VFC0235,VFDB:VFG004912
contig_1	Pyrodigal	gene	434724	434930	.	+	.	ID=GCA000144955_00390_gene;locus_tag=GCA000144955_00390
contig_1	Pyrodigal	CDS	434724	434930	.	+	0	ID=GCA000144955_00390;Name=hypothetical protein;locus_tag=GCA000144955_00390;product=hypothetical protein;Parent=GCA000144955_00390_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	435098	435409	.	+	.	ID=GCA000144955_00391_gene;locus_tag=GCA000144955_00391
contig_1	Pyrodigal	CDS	435098	435409	.	+	0	ID=GCA000144955_00391;Name=Exotoxin;locus_tag=GCA000144955_00391;product=Exotoxin;Parent=GCA000144955_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380EDZ3,UniRef:UniRef90_A0A380EDZ3
contig_1	Pyrodigal	gene	435767	436450	.	+	.	ID=GCA000144955_00392_gene;locus_tag=GCA000144955_00392
contig_1	Pyrodigal	CDS	435767	436450	.	+	0	ID=GCA000144955_00392;Name=superantigen-like protein SSL10;locus_tag=GCA000144955_00392;product=superantigen-like protein SSL10;Parent=GCA000144955_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778480.1,SO:0001217,UniParc:UPI0001DDA8D5,UniRef:UniRef100_UPI0001DDA8D5,UniRef:UniRef50_Q2G2X7,UniRef:UniRef90_A0A7Z7QWX2
contig_1	Pyrodigal	gene	436711	438267	.	+	.	ID=GCA000144955_00393_gene;locus_tag=GCA000144955_00393;gene=hsdM
contig_1	Pyrodigal	CDS	436711	438267	.	+	0	ID=GCA000144955_00393;Name=type I restriction-modification system subunit M;locus_tag=GCA000144955_00393;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;gene=hsdM;Parent=GCA000144955_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,KEGG:K03427,RefSeq:WP_000028594.1,SO:0001217,UniParc:UPI0001DDA8D6,UniRef:UniRef100_UPI0001DDA8D6,UniRef:UniRef50_B1BVR9,UniRef:UniRef90_A0A0H3JSX7;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	438260	439495	.	+	.	ID=GCA000144955_00394_gene;locus_tag=GCA000144955_00394
contig_1	Pyrodigal	CDS	438260	439495	.	+	0	ID=GCA000144955_00394;Name=restriction endonuclease subunit S;locus_tag=GCA000144955_00394;product=restriction endonuclease subunit S;Parent=GCA000144955_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000072616.1,SO:0001217,UniParc:UPI0001DDA8D7,UniRef:UniRef100_UPI0001DDA8D7,UniRef:UniRef50_A0A2A4GVC4,UniRef:UniRef90_UPI0001DDA8D7;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	439974	440669	.	+	.	ID=GCA000144955_00395_gene;locus_tag=GCA000144955_00395
contig_1	Pyrodigal	CDS	439974	440669	.	+	0	ID=GCA000144955_00395;Name=superantigen-like protein SSL11;locus_tag=GCA000144955_00395;product=superantigen-like protein SSL11;Parent=GCA000144955_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23587,RefSeq:WP_000769142.1,SO:0001217,UniParc:UPI0001DDA8D8,UniRef:UniRef100_UPI0001DDA8D8,UniRef:UniRef50_A8E1U5,UniRef:UniRef90_A0A2K4AIS5
contig_1	Pyrodigal	gene	440691	442196	.	+	.	ID=GCA000144955_00396_gene;locus_tag=GCA000144955_00396
contig_1	Pyrodigal	CDS	440691	442196	.	+	0	ID=GCA000144955_00396;Name=FKLRK protein;locus_tag=GCA000144955_00396;product=FKLRK protein;Parent=GCA000144955_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001208887,BlastRules:WP_001208912,BlastRules:WP_001208927,RefSeq:WP_001208924.1,SO:0001217,UniParc:UPI0001DDA8D9,UniRef:UniRef100_UPI0001DDA8D9,UniRef:UniRef50_A0A418JJR9,UniRef:UniRef90_A0A7U7JSL0
contig_1	Pyrodigal	gene	442302	442610	.	-	.	ID=GCA000144955_00397_gene;locus_tag=GCA000144955_00397;gene=spn
contig_1	Pyrodigal	CDS	442302	442610	.	-	0	ID=GCA000144955_00397;Name=myeloperoxidase inhibitor SPIN;locus_tag=GCA000144955_00397;product=myeloperoxidase inhibitor SPIN;gene=spn;Parent=GCA000144955_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001667246,RefSeq:WP_000669519.1,SO:0001217,UniParc:UPI00000C7F58,UniRef:UniRef100_Q2G0X2,UniRef:UniRef50_A0A2A4GXB5,UniRef:UniRef90_Q2G0X2
contig_1	Pyrodigal	gene	442947	443759	.	+	.	ID=GCA000144955_00398_gene;locus_tag=GCA000144955_00398
contig_1	Pyrodigal	CDS	442947	443759	.	+	0	ID=GCA000144955_00398;Name=putative lipoprotein SAR0438;locus_tag=GCA000144955_00398;product=putative lipoprotein SAR0438;Dbxref=GO:0005886;Parent=GCA000144955_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q6GJN3
contig_1	Pyrodigal	gene	443804	444529	.	+	.	ID=GCA000144955_00399_gene;locus_tag=GCA000144955_00399
contig_1	Pyrodigal	CDS	443804	444529	.	+	0	ID=GCA000144955_00399;Name=tandem-type lipoprotein;locus_tag=GCA000144955_00399;product=tandem-type lipoprotein;Parent=GCA000144955_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2YVQ6,UniRef:UniRef90_UPI0001DDA8DB
contig_1	Pyrodigal	gene	444647	445447	.	+	.	ID=GCA000144955_00400_gene;locus_tag=GCA000144955_00400
contig_1	Pyrodigal	CDS	444647	445447	.	+	0	ID=GCA000144955_00400;Name=tandem-type lipoprotein;locus_tag=GCA000144955_00400;product=tandem-type lipoprotein;Parent=GCA000144955_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001211498.1,SO:0001217,UniParc:UPI0001DDA8DC,UniRef:UniRef100_UPI0001DDA8DC,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_UPI00257CE055
contig_1	Pyrodigal	gene	445466	446236	.	+	.	ID=GCA000144955_00401_gene;locus_tag=GCA000144955_00401;gene=lpl5
contig_1	Pyrodigal	CDS	445466	446236	.	+	0	ID=GCA000144955_00401;Name=tandem-type lipoprotein Lpl5;locus_tag=GCA000144955_00401;product=tandem-type lipoprotein Lpl5;Dbxref=GO:0005886;gene=lpl5;Parent=GCA000144955_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000835992,RefSeq:WP_000835995.1,SO:0001217,UniParc:UPI0001DDA8DD,UniRef:UniRef100_UPI0001DDA8DD,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q5HIN6
contig_1	Pyrodigal	gene	446268	447068	.	+	.	ID=GCA000144955_00402_gene;locus_tag=GCA000144955_00402
contig_1	Pyrodigal	CDS	446268	447068	.	+	0	ID=GCA000144955_00402;Name=tandem-type lipoprotein;locus_tag=GCA000144955_00402;product=tandem-type lipoprotein;Parent=GCA000144955_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000456135.1,SO:0001217,UniParc:UPI0001DDA8DE,UniRef:UniRef100_UPI0001DDA8DE,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_UPI00024779D3
contig_1	Pyrodigal	gene	447087	447869	.	+	.	ID=GCA000144955_00403_gene;locus_tag=GCA000144955_00403
contig_1	Pyrodigal	CDS	447087	447869	.	+	0	ID=GCA000144955_00403;Name=Tandem-type lipoprotein Lpl9;locus_tag=GCA000144955_00403;product=Tandem-type lipoprotein Lpl9;Parent=GCA000144955_00403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000835985.1,SO:0001217,UniParc:UPI0001DDA8DF,UniRef:UniRef100_UPI0001DDA8DF,UniRef:UniRef50_Q2YVQ6,UniRef:UniRef90_A0A0U1MFA3
contig_1	Pyrodigal	gene	448048	448845	.	+	.	ID=GCA000144955_00404_gene;locus_tag=GCA000144955_00404
contig_1	Pyrodigal	CDS	448048	448845	.	+	0	ID=GCA000144955_00404;Name=tandem-type lipoprotein;locus_tag=GCA000144955_00404;product=tandem-type lipoprotein;Parent=GCA000144955_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G1Q1,UniRef:UniRef90_UPI00358DC142
contig_1	Pyrodigal	gene	448848	450173	.	+	.	ID=GCA000144955_00405_gene;locus_tag=GCA000144955_00405
contig_1	Pyrodigal	CDS	448848	450173	.	+	0	ID=GCA000144955_00405;Name=Fungal lipase-like domain-containing protein;locus_tag=GCA000144955_00405;product=Fungal lipase-like domain-containing protein;Parent=GCA000144955_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000750586.1,SO:0001217,UniParc:UPI0001DDA8E1,UniRef:UniRef100_UPI0001DDA8E1,UniRef:UniRef50_A0A6A9GY48,UniRef:UniRef90_A0A941EIT4
contig_1	Pyrodigal	gene	450170	450493	.	+	.	ID=GCA000144955_00406_gene;locus_tag=GCA000144955_00406
contig_1	Pyrodigal	CDS	450170	450493	.	+	0	ID=GCA000144955_00406;Name=Cytosolic protein;locus_tag=GCA000144955_00406;product=Cytosolic protein;Parent=GCA000144955_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000971502.1,SO:0001217,UniParc:UPI0002F3BF19,UniRef:UniRef100_UPI0002F3BF19,UniRef:UniRef50_Q2G0W7,UniRef:UniRef90_Q2G0W7
contig_1	Pyrodigal	gene	450512	450820	.	+	.	ID=GCA000144955_00407_gene;locus_tag=GCA000144955_00407
contig_1	Pyrodigal	CDS	450512	450820	.	+	0	ID=GCA000144955_00407;Name=hypothetical protein;locus_tag=GCA000144955_00407;product=hypothetical protein;Parent=GCA000144955_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2K4AJX9
contig_1	Pyrodigal	gene	451109	451303	.	-	.	ID=GCA000144955_00408_gene;locus_tag=GCA000144955_00408
contig_1	Pyrodigal	CDS	451109	451303	.	-	0	ID=GCA000144955_00408;Name=hypothetical protein;locus_tag=GCA000144955_00408;product=hypothetical protein;Parent=GCA000144955_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B140E,UniRef:UniRef100_A0A5F0HJ68,UniRef:UniRef50_Q2G0W5,UniRef:UniRef90_A0A0H3JVN5
contig_1	Pyrodigal	gene	451501	452703	.	+	.	ID=GCA000144955_00409_gene;locus_tag=GCA000144955_00409;gene=yejR
contig_1	Pyrodigal	CDS	451501	452703	.	+	0	ID=GCA000144955_00409;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000144955_00409;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000144955_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_001062993.1,SO:0001217,UniParc:UPI0001DDA8E4,UniRef:UniRef100_UPI0001DDA8E4,UniRef:UniRef50_P94400,UniRef:UniRef90_Q2G0W4
contig_1	Infernal	gene	453297	453452	.	-	.	ID=GCA000144955_00410_gene;locus_tag=GCA000144955_00410;gene=sau-41
contig_1	Infernal	ncRNA	453297	453452	7.8e-31	-	.	ID=GCA000144955_00410;Name=Staphylococcus sRNA sau-41;locus_tag=GCA000144955_00410;product=Staphylococcus sRNA sau-41;Dbxref=RFAM:RF02390;Parent=GCA000144955_00410_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02390
contig_1	Bakta	gene	453362	453424	.	-	.	ID=GCA000144955_00411_gene;locus_tag=GCA000144955_00411;inference=ab initio prediction:Bakta;gene=psmA4
contig_1	Bakta	CDS	453362	453424	.	-	0	ID=GCA000144955_00411;Name=Phenol-soluble modulin alpha 4 peptide;locus_tag=GCA000144955_00411;product=Phenol-soluble modulin alpha 4 peptide;Dbxref=GO:0031640;gene=psmA4;Parent=GCA000144955_00411_gene;Note=RefSeq:WP_014532416.1,SO:0001217,UniParc:UPI000161A44A,UniRef:UniRef100_P0C818,UniRef:UniRef50_P0C818,UniRef:UniRef90_P0C818
contig_1	Bakta	gene	453488	453556	.	-	.	ID=GCA000144955_00412_gene;locus_tag=GCA000144955_00412;inference=ab initio prediction:Bakta;gene=psmA3
contig_1	Bakta	CDS	453488	453556	.	-	0	ID=GCA000144955_00412;Name=Phenol-soluble modulin alpha 3 peptide;locus_tag=GCA000144955_00412;product=Phenol-soluble modulin alpha 3 peptide;Dbxref=GO:0031640;gene=psmA3;Parent=GCA000144955_00412_gene;Note=RefSeq:WP_014373779.1,SO:0001217,UniParc:UPI000161A449,UniRef:UniRef100_P0C805,UniRef:UniRef50_P0C805,UniRef:UniRef90_P0C805
contig_1	Bakta	gene	453608	453673	.	-	.	ID=GCA000144955_00413_gene;locus_tag=GCA000144955_00413;inference=ab initio prediction:Bakta;gene=psmA2
contig_1	Bakta	CDS	453608	453673	.	-	0	ID=GCA000144955_00413;Name=Phenol-soluble modulin alpha 2 peptide;locus_tag=GCA000144955_00413;product=Phenol-soluble modulin alpha 2 peptide;Dbxref=GO:0031640;gene=psmA2;Parent=GCA000144955_00413_gene;Note=SO:0001217,UniRef:UniRef50_P0C7Z3,UniRef:UniRef90_P0C7Z3
contig_1	Bakta	gene	453705	453770	.	-	.	ID=GCA000144955_00414_gene;locus_tag=GCA000144955_00414;inference=ab initio prediction:Bakta;gene=psmA1
contig_1	Bakta	CDS	453705	453770	.	-	0	ID=GCA000144955_00414;Name=Phenol-soluble modulin alpha 1 peptide;locus_tag=GCA000144955_00414;product=Phenol-soluble modulin alpha 1 peptide;Dbxref=GO:0031640;gene=psmA1;Parent=GCA000144955_00414_gene;Note=RefSeq:WP_014373781.1,SO:0001217,UniParc:UPI00015FD704,UniRef:UniRef100_P0C7Y1,UniRef:UniRef50_P0C7Y1,UniRef:UniRef90_P0C7Y1
contig_1	Pyrodigal	gene	454291	455775	.	+	.	ID=GCA000144955_00415_gene;locus_tag=GCA000144955_00415;gene=nuoL
contig_1	Pyrodigal	CDS	454291	455775	.	+	0	ID=GCA000144955_00415;Name=NADH dehydrogenase subunit 5;locus_tag=GCA000144955_00415;product=NADH dehydrogenase subunit 5;gene=nuoL;Parent=GCA000144955_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1009,RefSeq:WP_000948287.1,SO:0001217,UniParc:UPI0001DDA8E6,UniRef:UniRef100_UPI0001DDA8E6,UniRef:UniRef50_Q2G0W2,UniRef:UniRef90_Q2G0W2;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	455788	458493	.	+	.	ID=GCA000144955_00416_gene;locus_tag=GCA000144955_00416;gene=dabA
contig_1	Pyrodigal	CDS	455788	458493	.	+	0	ID=GCA000144955_00416;Name=putative inorganic carbon transporter subunit DabA;locus_tag=GCA000144955_00416;product=putative inorganic carbon transporter subunit DabA;Dbxref=GO:0005886,GO:0008270;gene=dabA;Parent=GCA000144955_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3002,KEGG:K09822,RefSeq:WP_000211526.1,SO:0001217,UniParc:UPI0001DDA8E7,UniRef:UniRef100_UPI0001DDA8E7,UniRef:UniRef50_Q2G0W1,UniRef:UniRef90_Q2G0W1
contig_1	Pyrodigal	gene	458655	459017	.	+	.	ID=GCA000144955_00417_gene;locus_tag=GCA000144955_00417;gene=mpsC
contig_1	Pyrodigal	CDS	458655	459017	.	+	0	ID=GCA000144955_00417;Name=Na+-translocating membrane putative-generating system MpsC domain-containing protein;locus_tag=GCA000144955_00417;product=Na+-translocating membrane putative-generating system MpsC domain-containing protein;gene=mpsC;Parent=GCA000144955_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5609,RefSeq:WP_000831495.1,SO:0001217,UniParc:UPI000005451F,UniRef:UniRef100_Q2G0W0,UniRef:UniRef50_A0A7U7PXA8,UniRef:UniRef90_A0A7U7PXA8
contig_1	Pyrodigal	gene	459700	460374	.	+	.	ID=GCA000144955_00418_gene;locus_tag=GCA000144955_00418;gene=pgpB
contig_1	Pyrodigal	CDS	459700	460374	.	+	0	ID=GCA000144955_00418;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000144955_00418;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000144955_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000565822.1,SO:0001217,UniParc:UPI0001B3ACB0,UniRef:UniRef100_A0A0U1MEN8,UniRef:UniRef50_Q2G0V8,UniRef:UniRef90_Q2G0V8
contig_1	Pyrodigal	gene	460411	461145	.	+	.	ID=GCA000144955_00419_gene;locus_tag=GCA000144955_00419;gene=yvaK
contig_1	Pyrodigal	CDS	460411	461145	.	+	0	ID=GCA000144955_00419;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000144955_00419;product=Serine aminopeptidase S33 domain-containing protein;gene=yvaK;Parent=GCA000144955_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001220808.1,SO:0001217,UniParc:UPI0001DDA8E8,UniRef:UniRef100_UPI0001DDA8E8,UniRef:UniRef50_Q2G0V7,UniRef:UniRef90_Q2G0V7
contig_1	Pyrodigal	gene	461554	462891	.	+	.	ID=GCA000144955_00420_gene;locus_tag=GCA000144955_00420;gene=yocR
contig_1	Pyrodigal	CDS	461554	462891	.	+	0	ID=GCA000144955_00420;Name=Transporter;locus_tag=GCA000144955_00420;product=Transporter;gene=yocR;Parent=GCA000144955_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_000828722.1,SO:0001217,UniParc:UPI0001AE9B20,UniRef:UniRef100_A0A0H3JV22,UniRef:UniRef50_A0A654CN93,UniRef:UniRef90_Q2G0V5
contig_1	Pyrodigal	gene	463108	464013	.	+	.	ID=GCA000144955_00421_gene;locus_tag=GCA000144955_00421;gene=cysK
contig_1	Pyrodigal	CDS	463108	464013	.	+	0	ID=GCA000144955_00421;Name=Tryptophan synthase beta chain-like PALP domain-containing protein;locus_tag=GCA000144955_00421;product=Tryptophan synthase beta chain-like PALP domain-containing protein;gene=cysK;Parent=GCA000144955_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000634115.1,SO:0001217,UniParc:UPI0001DDA8E9,UniRef:UniRef100_UPI0001DDA8E9,UniRef:UniRef50_Q2G0V4,UniRef:UniRef90_Q2G0V4
contig_1	Pyrodigal	gene	464006	465148	.	+	.	ID=GCA000144955_00422_gene;locus_tag=GCA000144955_00422;gene=metC
contig_1	Pyrodigal	CDS	464006	465148	.	+	0	ID=GCA000144955_00422;Name=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;locus_tag=GCA000144955_00422;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;Dbxref=GO:0019346,GO:0030170;gene=metC;Parent=GCA000144955_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,KEGG:K17217,RefSeq:WP_001036645.1,SO:0001217,UniParc:UPI0001DDA8EA,UniRef:UniRef100_UPI0001DDA8EA,UniRef:UniRef50_Q1M0P5,UniRef:UniRef90_A0A2Y2FJW5;ec_number=4.4.1.2
contig_1	Pyrodigal	gene	465443	466468	.	+	.	ID=GCA000144955_00423_gene;locus_tag=GCA000144955_00423;gene=metN1
contig_1	Pyrodigal	CDS	465443	466468	.	+	0	ID=GCA000144955_00423;Name=Methionine import ATP-binding protein MetN 1;locus_tag=GCA000144955_00423;product=Methionine import ATP-binding protein MetN 1;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN1;Parent=GCA000144955_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000569279.1,SO:0001217,UniParc:UPI0001DDA8EB,UniRef:UniRef100_UPI0001DDA8EB,UniRef:UniRef50_Q2G0V2,UniRef:UniRef90_Q2G0V2;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	466472	467131	.	+	.	ID=GCA000144955_00424_gene;locus_tag=GCA000144955_00424;gene=metP
contig_1	Pyrodigal	CDS	466472	467131	.	+	0	ID=GCA000144955_00424;Name=Methionine ABC transporter%2C permease component;locus_tag=GCA000144955_00424;product=Methionine ABC transporter%2C permease component;gene=metP;Parent=GCA000144955_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000467994.1,SO:0001217,UniParc:UPI0000054516,UniRef:UniRef100_Q2G0V1,UniRef:UniRef50_S2XCZ2,UniRef:UniRef90_A0A7U7JSM8
contig_1	Pyrodigal	gene	467168	468010	.	+	.	ID=GCA000144955_00425_gene;locus_tag=GCA000144955_00425;gene=gmpC
contig_1	Pyrodigal	CDS	467168	468010	.	+	0	ID=GCA000144955_00425;Name=dipeptide ABC transporter glycylmethionine-binding lipoprotein;locus_tag=GCA000144955_00425;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;gene=gmpC;Parent=GCA000144955_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825530,COG:COG1464,COG:P,RefSeq:WP_000825526.1,SO:0001217,UniParc:UPI0001DDA8EC,UniRef:UniRef100_UPI0001DDA8EC,UniRef:UniRef50_A0A2K4FBN2,UniRef:UniRef90_A0A2S6D5W8
contig_1	Pyrodigal	gene	468342	469349	.	+	.	ID=GCA000144955_00426_gene;locus_tag=GCA000144955_00426;gene=aaa
contig_1	Pyrodigal	CDS	468342	469349	.	+	0	ID=GCA000144955_00426;Name=autolysin/adhesin Aaa;locus_tag=GCA000144955_00426;product=autolysin/adhesin Aaa;Dbxref=GO:0000917,GO:0005576,GO:0008745,GO:0008932,GO:0009986,GO:0031640,GO:0042742,GO:0071555;gene=aaa;Parent=GCA000144955_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001170264,RefSeq:WP_001170267.1,SO:0001217,UniParc:UPI0001DA230E,UniRef:UniRef100_A0A0D1JUU6,UniRef:UniRef50_Q2G0U9,UniRef:UniRef90_Q2YVT4;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	469534	469803	.	-	.	ID=GCA000144955_00427_gene;locus_tag=GCA000144955_00427
contig_1	Pyrodigal	CDS	469534	469803	.	-	0	ID=GCA000144955_00427;Name=Cytosolic protein;locus_tag=GCA000144955_00427;product=Cytosolic protein;Parent=GCA000144955_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001129473.1,SO:0001217,UniParc:UPI0000054512,UniRef:UniRef100_Q2G0U8,UniRef:UniRef50_Q2G0U8,UniRef:UniRef90_Q2G0U8
contig_1	Pyrodigal	gene	469953	470348	.	+	.	ID=GCA000144955_00428_gene;locus_tag=GCA000144955_00428;gene=mutT
contig_1	Pyrodigal	CDS	469953	470348	.	+	0	ID=GCA000144955_00428;Name=NUDIX domain-containing protein;locus_tag=GCA000144955_00428;product=NUDIX domain-containing protein;gene=mutT;Parent=GCA000144955_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000588522.1,SO:0001217,UniParc:UPI00000CAABF,UniRef:UniRef100_W8UT95,UniRef:UniRef50_A0A2K4FBI9,UniRef:UniRef90_A0AAE8PBQ1
contig_1	Pyrodigal	gene	470338	470823	.	+	.	ID=GCA000144955_00429_gene;locus_tag=GCA000144955_00429;gene=rimI
contig_1	Pyrodigal	CDS	470338	470823	.	+	0	ID=GCA000144955_00429;Name=Acetyltransferase;locus_tag=GCA000144955_00429;product=Acetyltransferase;gene=rimI;Parent=GCA000144955_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000183669.1,SO:0001217,UniParc:UPI00004B5B1D,UniRef:UniRef100_Q2G0U6,UniRef:UniRef50_A0A6B1RF14,UniRef:UniRef90_A0A6B1RF14
contig_1	Pyrodigal	gene	470993	471775	.	-	.	ID=GCA000144955_00430_gene;locus_tag=GCA000144955_00430
contig_1	Pyrodigal	CDS	470993	471775	.	-	0	ID=GCA000144955_00430;Name=YibE/F family protein;locus_tag=GCA000144955_00430;product=YibE/F family protein;Parent=GCA000144955_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,RefSeq:WP_000994678.1,SO:0001217,UniParc:UPI000005450F,UniRef:UniRef100_Q2G0U5,UniRef:UniRef50_Q2G0U5,UniRef:UniRef90_Q2G0U5
contig_1	Pyrodigal	gene	471772	472884	.	-	.	ID=GCA000144955_00431_gene;locus_tag=GCA000144955_00431
contig_1	Pyrodigal	CDS	471772	472884	.	-	0	ID=GCA000144955_00431;Name=YibE/F family protein;locus_tag=GCA000144955_00431;product=YibE/F family protein;Parent=GCA000144955_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,SO:0001217,UniParc:UPI00000D77D1,UniRef:UniRef100_W8U1K0,UniRef:UniRef50_Q2G0U4,UniRef:UniRef90_Q2G0U4
contig_1	Pyrodigal	gene	473005	473889	.	-	.	ID=GCA000144955_00432_gene;locus_tag=GCA000144955_00432;gene=gltC
contig_1	Pyrodigal	CDS	473005	473889	.	-	0	ID=GCA000144955_00432;Name=glutamate biosynthesis transcriptional regulator GltC;locus_tag=GCA000144955_00432;product=glutamate biosynthesis transcriptional regulator GltC;Dbxref=GO:0003700,GO:1902065;gene=gltC;Parent=GCA000144955_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000403903.1,SO:0001217,UniParc:UPI0001DDA8ED,UniRef:UniRef100_UPI0001DDA8ED,UniRef:UniRef50_Q2G0U3,UniRef:UniRef90_Q2G0U3
contig_1	Pyrodigal	gene	474070	478569	.	+	.	ID=GCA000144955_00433_gene;locus_tag=GCA000144955_00433;gene=gltB
contig_1	Pyrodigal	CDS	474070	478569	.	+	0	ID=GCA000144955_00433;Name=glutamate synthase large subunit;locus_tag=GCA000144955_00433;product=glutamate synthase large subunit;Dbxref=GO:0003824,GO:0006537,GO:0008152,GO:0015930,GO:0016491;gene=gltB;Parent=GCA000144955_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0070,COG:E,RefSeq:WP_000551332.1,SO:0001217,UniParc:UPI0001DDAA7F,UniRef:UniRef100_UPI0001DDAA7F,UniRef:UniRef50_A0A2X2UM59,UniRef:UniRef90_A0A2X2UM59;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	478587	480050	.	+	.	ID=GCA000144955_00434_gene;locus_tag=GCA000144955_00434;gene=gltD
contig_1	Pyrodigal	CDS	478587	480050	.	+	0	ID=GCA000144955_00434;Name=Glutamate synthase subunit beta;locus_tag=GCA000144955_00434;product=Glutamate synthase subunit beta;gene=gltD;Parent=GCA000144955_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0493,COG:ER,RefSeq:WP_000503585.1,SO:0001217,UniParc:UPI0001DDAA80,UniRef:UniRef100_UPI0001DDAA80,UniRef:UniRef50_B9DLG4,UniRef:UniRef90_A0A0E1X9F2
contig_1	tRNAscan-SE	gene	480321	480413	.	+	.	ID=GCA000144955_00435_gene;locus_tag=GCA000144955_00435;gene=trnS
contig_1	tRNAscan-SE	tRNA	480321	480413	.	+	.	ID=GCA000144955_00435;Name=tRNA-Ser(tga);locus_tag=GCA000144955_00435;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000144955_00435_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	480884	482311	.	+	.	ID=GCA000144955_00436_gene;locus_tag=GCA000144955_00436;gene=treB
contig_1	Pyrodigal	CDS	480884	482311	.	+	0	ID=GCA000144955_00436;Name=PTS trehalose transporter subunit IIBC;locus_tag=GCA000144955_00436;product=PTS trehalose transporter subunit IIBC;Dbxref=GO:0008982,GO:0009401,GO:0015574,GO:0015771,GO:0016020;gene=treB;Parent=GCA000144955_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02819,RefSeq:WP_000279377.1,SO:0001217,UniParc:UPI0001DDAA81,UniRef:UniRef100_A0A6B5F5T9,UniRef:UniRef50_A0A7S8HGB6,UniRef:UniRef90_A0A2U0IK03;ec_number=2.7.1.201
contig_1	Pyrodigal	gene	482375	484015	.	+	.	ID=GCA000144955_00437_gene;locus_tag=GCA000144955_00437;gene=treC
contig_1	Pyrodigal	CDS	482375	484015	.	+	0	ID=GCA000144955_00437;Name=alpha%2Calpha-phosphotrehalase;locus_tag=GCA000144955_00437;product=alpha%2Calpha-phosphotrehalase;Dbxref=GO:0005737,GO:0005991,GO:0008788;gene=treC;Parent=GCA000144955_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_000031514.1,SO:0001217,UniParc:UPI0001DDAA82,UniRef:UniRef100_UPI0001DDAA82,UniRef:UniRef50_A0A1C7FDU5,UniRef:UniRef90_A0AAE2ZTT9;ec_number=3.2.1.93
contig_1	Pyrodigal	gene	484040	484768	.	+	.	ID=GCA000144955_00438_gene;locus_tag=GCA000144955_00438;gene=treR
contig_1	Pyrodigal	CDS	484040	484768	.	+	0	ID=GCA000144955_00438;Name=trehalose operon repressor;locus_tag=GCA000144955_00438;product=trehalose operon repressor;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=treR;Parent=GCA000144955_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03486,RefSeq:WP_000240629.1,SO:0001217,UniParc:UPI0001DDAA83,UniRef:UniRef100_UPI0001DDAA83,UniRef:UniRef50_A0A291JNW9,UniRef:UniRef90_A0A380DK00
contig_1	Infernal	gene	484830	485099	.	+	.	ID=GCA000144955_00439_gene;locus_tag=GCA000144955_00439;gene=Bacteria_large_SRP
contig_1	Infernal	ncRNA	484830	485099	2.3e-31	+	.	ID=GCA000144955_00439;Name=Bacterial large signal recognition particle RNA;locus_tag=GCA000144955_00439;product=Bacterial large signal recognition particle RNA;Dbxref=RFAM:RF01854;Parent=GCA000144955_00439_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01854
contig_1	Infernal	gene	484948	485047	.	+	.	ID=GCA000144955_00440_gene;locus_tag=GCA000144955_00440;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	484948	485047	9.6e-12	+	.	ID=GCA000144955_00440;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000144955_00440;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000144955_00440_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	Pyrodigal	gene	485409	485933	.	+	.	ID=GCA000144955_00441_gene;locus_tag=GCA000144955_00441;gene=yhbS
contig_1	Pyrodigal	CDS	485409	485933	.	+	0	ID=GCA000144955_00441;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00441;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000144955_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001167828.1,SO:0001217,UniParc:UPI0000054503,UniRef:UniRef100_Q2G0T6,UniRef:UniRef50_Q2G0T6,UniRef:UniRef90_Q2G0T6
contig_1	Pyrodigal	gene	486002	487699	.	+	.	ID=GCA000144955_00442_gene;locus_tag=GCA000144955_00442;gene=dnaX
contig_1	Pyrodigal	CDS	486002	487699	.	+	0	ID=GCA000144955_00442;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000144955_00442;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0009360;gene=dnaX;Parent=GCA000144955_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,KEGG:K02343,RefSeq:WP_001109052.1,SO:0001217,UniParc:UPI0001DDAA84,UniRef:UniRef100_UPI0001DDAA84,UniRef:UniRef50_A0A9X6AJV3,UniRef:UniRef90_A0A3M9FQF8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	487789	488106	.	+	.	ID=GCA000144955_00443_gene;locus_tag=GCA000144955_00443;gene=ybaB
contig_1	Pyrodigal	CDS	487789	488106	.	+	0	ID=GCA000144955_00443;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000144955_00443;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA000144955_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,RefSeq:WP_001213992.1,SO:0001217,UniParc:UPI0000054501,UniRef:UniRef100_Q2G0T4,UniRef:UniRef50_Q2G0T4,UniRef:UniRef90_Q2G0T4
contig_1	Pyrodigal	gene	488113	488709	.	+	.	ID=GCA000144955_00444_gene;locus_tag=GCA000144955_00444;gene=recR
contig_1	Pyrodigal	CDS	488113	488709	.	+	0	ID=GCA000144955_00444;Name=recombination mediator RecR;locus_tag=GCA000144955_00444;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000144955_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_000559156.1,SO:0001217,UniParc:UPI0000054500,UniRef:UniRef100_Q2G0T3,UniRef:UniRef50_Q6GJJ3,UniRef:UniRef90_Q6GJJ3
contig_1	Infernal	gene	489562	491113	.	+	.	ID=GCA000144955_00445_gene;locus_tag=GCA000144955_00445;gene=rrs
contig_1	Infernal	rRNA	489562	491113	1.3e-49	+	.	ID=GCA000144955_00445;Name=16S ribosomal RNA;locus_tag=GCA000144955_00445;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_00445_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Infernal	gene	491434	494356	.	+	.	ID=GCA000144955_00446_gene;locus_tag=GCA000144955_00446;gene=rrl
contig_1	Infernal	rRNA	491434	494356	1.4e-06	+	.	ID=GCA000144955_00446;Name=23S ribosomal RNA;locus_tag=GCA000144955_00446;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_00446_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	494429	494543	.	+	.	ID=GCA000144955_00447_gene;locus_tag=GCA000144955_00447;gene=rrf
contig_1	Infernal	rRNA	494429	494543	1.1e-14	+	.	ID=GCA000144955_00447;Name=5S ribosomal RNA;locus_tag=GCA000144955_00447;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_00447_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	495727	497064	.	+	.	ID=GCA000144955_00448_gene;locus_tag=GCA000144955_00448;gene=ldcC
contig_1	Pyrodigal	CDS	495727	497064	.	+	0	ID=GCA000144955_00448;Name=Aminotransferase class V-fold PLP-dependent enzyme;locus_tag=GCA000144955_00448;product=Aminotransferase class V-fold PLP-dependent enzyme;gene=ldcC;Parent=GCA000144955_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1982,COG:E,RefSeq:WP_000812846.1,SO:0001217,UniParc:UPI0001DDAA85,UniRef:UniRef100_UPI0001DDAA85,UniRef:UniRef50_A0A3A5LD70,UniRef:UniRef90_A0A3A5LD70
contig_1	Pyrodigal	gene	497066	497683	.	+	.	ID=GCA000144955_00449_gene;locus_tag=GCA000144955_00449;gene=tmk
contig_1	Pyrodigal	CDS	497066	497683	.	+	0	ID=GCA000144955_00449;Name=dTMP kinase;locus_tag=GCA000144955_00449;product=dTMP kinase;Dbxref=GO:0004798,GO:0005524,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=tmk;Parent=GCA000144955_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,KEGG:K00943,RefSeq:WP_001272129.1,SO:0001217,UniParc:UPI0001DDAA86,UniRef:UniRef100_UPI0001DDAA86,UniRef:UniRef50_Q2G230,UniRef:UniRef90_Q2G230;ec_number=2.7.4.9
contig_1	Pyrodigal	gene	497711	498040	.	+	.	ID=GCA000144955_00450_gene;locus_tag=GCA000144955_00450;gene=darA
contig_1	Pyrodigal	CDS	497711	498040	.	+	0	ID=GCA000144955_00450;Name=Protein from nitrogen regulatory protein P-II (GLNB) family;locus_tag=GCA000144955_00450;product=Protein from nitrogen regulatory protein P-II (GLNB) family;gene=darA;Parent=GCA000144955_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3870,COG:T,RefSeq:WP_000781979.1,SO:0001217,UniParc:UPI0000054655,UniRef:UniRef100_Q2G229,UniRef:UniRef50_P37538,UniRef:UniRef90_Q2G229
contig_1	Pyrodigal	gene	498254	499180	.	+	.	ID=GCA000144955_00451_gene;locus_tag=GCA000144955_00451;gene=holB
contig_1	Pyrodigal	CDS	498254	499180	.	+	0	ID=GCA000144955_00451;Name=DNA polymerase III subunit delta';locus_tag=GCA000144955_00451;product=DNA polymerase III subunit delta';gene=holB;Parent=GCA000144955_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0470,COG:L,RefSeq:WP_000344331.1,SO:0001217,UniParc:UPI0001DDAA87,UniRef:UniRef100_UPI0001DDAA87,UniRef:UniRef50_B9DLG1,UniRef:UniRef90_A0A0H3JKW7
contig_1	Pyrodigal	gene	499181	499984	.	+	.	ID=GCA000144955_00452_gene;locus_tag=GCA000144955_00452;gene=yaaT
contig_1	Pyrodigal	CDS	499181	499984	.	+	0	ID=GCA000144955_00452;Name=PSP1 C-terminal domain-containing protein;locus_tag=GCA000144955_00452;product=PSP1 C-terminal domain-containing protein;gene=yaaT;Parent=GCA000144955_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1774,COG:T,RefSeq:WP_001134192.1,SO:0001217,UniParc:UPI0001DDAA88,UniRef:UniRef100_UPI0001DDAA88,UniRef:UniRef50_Q2G2W9,UniRef:UniRef90_Q2G2W9
contig_1	Pyrodigal	gene	500001	500348	.	+	.	ID=GCA000144955_00453_gene;locus_tag=GCA000144955_00453;gene=yabA
contig_1	Pyrodigal	CDS	500001	500348	.	+	0	ID=GCA000144955_00453;Name=DNA replication initiation control protein YabA;locus_tag=GCA000144955_00453;product=DNA replication initiation control protein YabA;Dbxref=GO:0006260;gene=yabA;Parent=GCA000144955_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4467,COG:L,RefSeq:WP_000375686.1,SO:0001217,UniParc:UPI00000D9CA0,UniRef:UniRef100_Q5HIJ1,UniRef:UniRef50_Q99WB7,UniRef:UniRef90_Q99WB7
contig_1	Pyrodigal	gene	500622	501347	.	+	.	ID=GCA000144955_00454_gene;locus_tag=GCA000144955_00454;gene=trmN6
contig_1	Pyrodigal	CDS	500622	501347	.	+	0	ID=GCA000144955_00454;Name=Methyltransferase;locus_tag=GCA000144955_00454;product=Methyltransferase;gene=trmN6;Parent=GCA000144955_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4123,COG:J,RefSeq:WP_000910687.1,SO:0001217,UniParc:UPI0001AE83BD,UniRef:UniRef100_A0A7W2PQU5,UniRef:UniRef50_A0A380G9L7,UniRef:UniRef90_A0A0U1MFR2
contig_1	Pyrodigal	gene	501340	501588	.	+	.	ID=GCA000144955_00455_gene;locus_tag=GCA000144955_00455;gene=yhbQ
contig_1	Pyrodigal	CDS	501340	501588	.	+	0	ID=GCA000144955_00455;Name=UPF0213 protein SACOL0530;locus_tag=GCA000144955_00455;product=UPF0213 protein SACOL0530;gene=yhbQ;Parent=GCA000144955_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2827,COG:L,RefSeq:WP_000377064.1,SO:0001217,UniParc:UPI000005464F,UniRef:UniRef100_Q2G2W7,UniRef:UniRef50_Q2G2W7,UniRef:UniRef90_Q2G2W7
contig_1	Pyrodigal	gene	501590	502429	.	+	.	ID=GCA000144955_00456_gene;locus_tag=GCA000144955_00456;gene=rsmI
contig_1	Pyrodigal	CDS	501590	502429	.	+	0	ID=GCA000144955_00456;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA000144955_00456;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0000451,GO:0008649,GO:0008757;gene=rsmI;Parent=GCA000144955_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0313,COG:J,RefSeq:WP_000279926.1,SO:0001217,UniParc:UPI000005464E,UniRef:UniRef100_Q2G1S1,UniRef:UniRef50_A0A380GAP2,UniRef:UniRef90_A0A7Z7W1X5;ec_number=2.1.1.198
contig_1	Pyrodigal	gene	502714	504687	.	+	.	ID=GCA000144955_00457_gene;locus_tag=GCA000144955_00457;gene=metG
contig_1	Pyrodigal	CDS	502714	504687	.	+	0	ID=GCA000144955_00457;Name=methionine--tRNA ligase;locus_tag=GCA000144955_00457;product=methionine--tRNA ligase;Dbxref=GO:0000049,GO:0004825,GO:0005524,GO:0005737,GO:0006431;gene=metG;Parent=GCA000144955_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0143,COG:J,RefSeq:WP_001051123.1,SO:0001217,UniParc:UPI0001DDAA89,UniRef:UniRef100_UPI0001DDAA89,UniRef:UniRef50_P23920,UniRef:UniRef90_Q8NY00;ec_number=6.1.1.10
contig_1	Pyrodigal	gene	504719	505492	.	+	.	ID=GCA000144955_00458_gene;locus_tag=GCA000144955_00458;gene=tatD
contig_1	Pyrodigal	CDS	504719	505492	.	+	0	ID=GCA000144955_00458;Name=Metal-dependent DNase;locus_tag=GCA000144955_00458;product=Metal-dependent DNase;gene=tatD;Parent=GCA000144955_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_000904312.1,SO:0001217,UniParc:UPI0000047408,UniRef:UniRef100_Q2G1S2,UniRef:UniRef50_P37545,UniRef:UniRef90_A0A7U7JSZ7;ec_number=3.1.21.-
contig_1	Pyrodigal	gene	505659	506195	.	+	.	ID=GCA000144955_00459_gene;locus_tag=GCA000144955_00459;gene=rnmV
contig_1	Pyrodigal	CDS	505659	506195	.	+	0	ID=GCA000144955_00459;Name=ribonuclease M5;locus_tag=GCA000144955_00459;product=ribonuclease M5;Dbxref=GO:0005737,GO:0006364,GO:0019843,GO:0043822,GO:0046872;gene=rnmV;Parent=GCA000144955_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1658,COG:J,KEGG:K05985,RefSeq:WP_000700077.1,SO:0001217,UniParc:UPI0001DDAA8A,UniRef:UniRef100_UPI0001DDAA8A,UniRef:UniRef50_Q2G0T1,UniRef:UniRef90_Q2G0T1;ec_number=3.1.26.8
contig_1	Pyrodigal	gene	506206	507099	.	+	.	ID=GCA000144955_00460_gene;locus_tag=GCA000144955_00460;gene=rsmA
contig_1	Pyrodigal	CDS	506206	507099	.	+	0	ID=GCA000144955_00460;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA000144955_00460;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0052908;gene=rsmA;Parent=GCA000144955_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0030,COG:J,RefSeq:WP_000886501.1,SO:0001217,UniParc:UPI0001DDAA8B,UniRef:UniRef100_UPI0001DDAA8B,UniRef:UniRef50_Q2G0T0,UniRef:UniRef90_Q2G0T0;ec_number=2.1.1.182
contig_1	Pyrodigal	gene	507199	507462	.	+	.	ID=GCA000144955_00461_gene;locus_tag=GCA000144955_00461
contig_1	Pyrodigal	CDS	507199	507462	.	+	0	ID=GCA000144955_00461;Name=Veg protein;locus_tag=GCA000144955_00461;product=Veg protein;Parent=GCA000144955_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4466,COG:S,RefSeq:WP_001126664.1,SO:0001217,UniParc:UPI0000054649,UniRef:UniRef100_Q2G0S9,UniRef:UniRef50_Q2G0S9,UniRef:UniRef90_Q2G0S9
contig_1	Pyrodigal	gene	507772	508620	.	+	.	ID=GCA000144955_00462_gene;locus_tag=GCA000144955_00462;gene=ispE
contig_1	Pyrodigal	CDS	507772	508620	.	+	0	ID=GCA000144955_00462;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA000144955_00462;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0005524,GO:0016114,GO:0050515;gene=ispE;Parent=GCA000144955_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1947,COG:I,KEGG:K00919,RefSeq:WP_000638877.1,SO:0001217,UniParc:UPI0001B3B45D,UniRef:UniRef100_A0A0U1MED5,UniRef:UniRef50_B9E8V7,UniRef:UniRef90_Q2G0S8;ec_number=2.7.1.148
contig_1	Pyrodigal	gene	508634	509458	.	+	.	ID=GCA000144955_00463_gene;locus_tag=GCA000144955_00463;gene=purR
contig_1	Pyrodigal	CDS	508634	509458	.	+	0	ID=GCA000144955_00463;Name=pur operon repressor;locus_tag=GCA000144955_00463;product=pur operon repressor;Dbxref=GO:0003677,GO:0006355,GO:0009116,GO:0045892,GO:0045982;gene=purR;Parent=GCA000144955_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K09685,RefSeq:WP_001269643.1,SO:0001217,UniParc:UPI0000054647,UniRef:UniRef100_Q2G0S7,UniRef:UniRef50_I0JH29,UniRef:UniRef90_Q5HRQ9
contig_1	Pyrodigal	gene	509475	509855	.	+	.	ID=GCA000144955_00464_gene;locus_tag=GCA000144955_00464;gene=ridA
contig_1	Pyrodigal	CDS	509475	509855	.	+	0	ID=GCA000144955_00464;Name=RidA family protein;locus_tag=GCA000144955_00464;product=RidA family protein;gene=ridA;Parent=GCA000144955_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_000691772.1,SO:0001217,UniParc:UPI0001DDAA8C,UniRef:UniRef100_UPI0001DDAA8C,UniRef:UniRef50_Q2G0S6,UniRef:UniRef90_Q2G0S6
contig_1	Pyrodigal	gene	509933	510235	.	+	.	ID=GCA000144955_00465_gene;locus_tag=GCA000144955_00465;gene=spoVG
contig_1	Pyrodigal	CDS	509933	510235	.	+	0	ID=GCA000144955_00465;Name=septation regulator SpoVG;locus_tag=GCA000144955_00465;product=septation regulator SpoVG;Dbxref=GO:0000917,GO:0030435;gene=spoVG;Parent=GCA000144955_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2088,COG:D,KEGG:K06412,RefSeq:WP_000868999.1,SO:0001217,UniParc:UPI0000054645,UniRef:UniRef100_Q2G0S5,UniRef:UniRef50_Q2G0S5,UniRef:UniRef90_Q2G0S5
contig_1	Pyrodigal	gene	510575	511927	.	+	.	ID=GCA000144955_00466_gene;locus_tag=GCA000144955_00466;gene=glmU
contig_1	Pyrodigal	CDS	510575	511927	.	+	0	ID=GCA000144955_00466;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA000144955_00466;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0005737,GO:0006048,GO:0008360,GO:0009245,GO:0009252,GO:0016020,GO:0019134,GO:0071555;gene=glmU;Parent=GCA000144955_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1207,COG:M,RefSeq:WP_001252527.1,SO:0001217,UniParc:UPI000002E7D6,UniRef:UniRef100_A0A0U1MG39,UniRef:UniRef50_Q2YVU6,UniRef:UniRef90_Q2YVU6;ec_number=2.7.7.23
contig_1	Pyrodigal	gene	512074	513039	.	+	.	ID=GCA000144955_00467_gene;locus_tag=GCA000144955_00467;gene=prs
contig_1	Pyrodigal	CDS	512074	513039	.	+	0	ID=GCA000144955_00467;Name=ribose-phosphate diphosphokinase;locus_tag=GCA000144955_00467;product=ribose-phosphate diphosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0006015,GO:0006164,GO:0009156,GO:0016301;gene=prs;Parent=GCA000144955_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_000933774.1,SO:0001217,UniParc:UPI0000054642,UniRef:UniRef100_P65236,UniRef:UniRef50_Q97E93,UniRef:UniRef90_Q49V09;ec_number=2.7.6.1
contig_1	Pyrodigal	gene	513189	513842	.	+	.	ID=GCA000144955_00468_gene;locus_tag=GCA000144955_00468;gene=rplY
contig_1	Pyrodigal	CDS	513189	513842	.	+	0	ID=GCA000144955_00468;Name=50S ribosomal protein L25/general stress protein Ctc;locus_tag=GCA000144955_00468;product=50S ribosomal protein L25/general stress protein Ctc;Dbxref=GO:0003735,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA000144955_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1825,COG:J,KEGG:K02897,RefSeq:WP_000157650.1,SO:0001217,UniParc:UPI00000D768D,UniRef:UniRef100_Q2FJE0,UniRef:UniRef50_Q2FJE0,UniRef:UniRef90_Q2FJE0
contig_1	Pyrodigal	gene	514153	514725	.	+	.	ID=GCA000144955_00469_gene;locus_tag=GCA000144955_00469;gene=pth
contig_1	Pyrodigal	CDS	514153	514725	.	+	0	ID=GCA000144955_00469;Name=aminoacyl-tRNA hydrolase;locus_tag=GCA000144955_00469;product=aminoacyl-tRNA hydrolase;Dbxref=GO:0004045,GO:0005737,GO:0006412;gene=pth;Parent=GCA000144955_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0193,COG:J,RefSeq:WP_000649791.1,SO:0001217,UniParc:UPI00000013BE,UniRef:UniRef100_Q2G0R9,UniRef:UniRef50_P37470,UniRef:UniRef90_Q2G0R9;ec_number=3.1.1.29
contig_1	Pyrodigal	gene	514725	518231	.	+	.	ID=GCA000144955_00470_gene;locus_tag=GCA000144955_00470;gene=mfd
contig_1	Pyrodigal	CDS	514725	518231	.	+	0	ID=GCA000144955_00470;Name=transcription-repair coupling factor;locus_tag=GCA000144955_00470;product=transcription-repair coupling factor;Dbxref=GO:0000716,GO:0003678,GO:0003684,GO:0005524,GO:0005737,GO:0006281,GO:0006355,GO:0016787;gene=mfd;Parent=GCA000144955_00470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1197,COG:LK,KEGG:K03723,RefSeq:WP_000154210.1,SO:0001217,UniParc:UPI0001DDAA8D,UniRef:UniRef100_UPI0001DDAA8D,UniRef:UniRef50_Q2G0R8,UniRef:UniRef90_Q2G0R8;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	518221	519747	.	+	.	ID=GCA000144955_00471_gene;locus_tag=GCA000144955_00471;gene=spoVB
contig_1	Pyrodigal	CDS	518221	519747	.	+	0	ID=GCA000144955_00471;Name=Polysaccharide biosynthesis protein C-terminal domain-containing protein;locus_tag=GCA000144955_00471;product=Polysaccharide biosynthesis protein C-terminal domain-containing protein;gene=spoVB;Parent=GCA000144955_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5841,COG:D,RefSeq:WP_000680739.1,SO:0001217,UniParc:UPI0001DDAA8E,UniRef:UniRef100_UPI0001DDAA8E,UniRef:UniRef50_A0A380G459,UniRef:UniRef90_Q2G0R7
contig_1	Pyrodigal	gene	519747	520940	.	+	.	ID=GCA000144955_00472_gene;locus_tag=GCA000144955_00472;gene=yabN
contig_1	Pyrodigal	CDS	519747	520940	.	+	0	ID=GCA000144955_00472;Name=Nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA000144955_00472;product=Nucleoside triphosphate pyrophosphohydrolase;gene=yabN;Parent=GCA000144955_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3956,COG:R,KEGG:K02499,RefSeq:WP_000951458.1,SO:0001217,UniParc:UPI0001DDAA8F,UniRef:UniRef100_UPI0001DDAA8F,UniRef:UniRef50_A0A240AB46,UniRef:UniRef90_A0A3A3A7S3
contig_1	Pyrodigal	gene	520937	521200	.	+	.	ID=GCA000144955_00473_gene;locus_tag=GCA000144955_00473;gene=hslR
contig_1	Pyrodigal	CDS	520937	521200	.	+	0	ID=GCA000144955_00473;Name=RNA-binding S4 domain-containing protein;locus_tag=GCA000144955_00473;product=RNA-binding S4 domain-containing protein;gene=hslR;Parent=GCA000144955_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1188,COG:J,RefSeq:WP_001234988.1,SO:0001217,UniParc:UPI000005463C,UniRef:UniRef100_Q2G0R5,UniRef:UniRef50_P37557,UniRef:UniRef90_Q2G0R5
contig_1	Pyrodigal	gene	521218	521610	.	+	.	ID=GCA000144955_00474_gene;locus_tag=GCA000144955_00474;gene=ftsB
contig_1	Pyrodigal	CDS	521218	521610	.	+	0	ID=GCA000144955_00474;Name=Septum formation initiator family protein;locus_tag=GCA000144955_00474;product=Septum formation initiator family protein;gene=ftsB;Parent=GCA000144955_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2919,COG:D,KEGG:K13052,RefSeq:WP_000792417.1,SO:0001217,UniParc:UPI000005463B,UniRef:UniRef100_Q2G0R4,UniRef:UniRef50_Q2G0R4,UniRef:UniRef90_Q2G0R4
contig_1	Pyrodigal	gene	521715	522116	.	+	.	ID=GCA000144955_00475_gene;locus_tag=GCA000144955_00475;gene=yabR
contig_1	Pyrodigal	CDS	521715	522116	.	+	0	ID=GCA000144955_00475;Name=S1 domain-containing RNA-binding protein;locus_tag=GCA000144955_00475;product=S1 domain-containing RNA-binding protein;Dbxref=GO:0003676;gene=yabR;Parent=GCA000144955_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1098,COG:R,RefSeq:WP_000021445.1,SO:0001217,UniParc:UPI0000054639,UniRef:UniRef100_Q2G0R3,UniRef:UniRef50_P37560,UniRef:UniRef90_A0AAJ5CU27
contig_1	Pyrodigal	gene	522296	523591	.	+	.	ID=GCA000144955_00476_gene;locus_tag=GCA000144955_00476;gene=tilS
contig_1	Pyrodigal	CDS	522296	523591	.	+	0	ID=GCA000144955_00476;Name=tRNA(Ile)-lysidine synthase;locus_tag=GCA000144955_00476;product=tRNA(Ile)-lysidine synthase;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0032267;gene=tilS;Parent=GCA000144955_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K04075,RefSeq:WP_001176716.1,SO:0001217,UniParc:UPI0001DD9176,UniRef:UniRef100_UPI0001DD9176,UniRef:UniRef50_Q5HRP5,UniRef:UniRef90_Q99W94;ec_number=6.3.4.19
contig_1	Pyrodigal	gene	523596	524135	.	+	.	ID=GCA000144955_00477_gene;locus_tag=GCA000144955_00477;gene=hpt
contig_1	Pyrodigal	CDS	523596	524135	.	+	0	ID=GCA000144955_00477;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA000144955_00477;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0000166,GO:0000287,GO:0004422,GO:0005829,GO:0006166,GO:0006178,GO:0032263,GO:0032264,GO:0046100,GO:0052657;gene=hpt;Parent=GCA000144955_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0634,COG:F,RefSeq:WP_000551283.1,SO:0001217,UniParc:UPI00000D7886,UniRef:UniRef100_Q5HIG5,UniRef:UniRef50_Q839B2,UniRef:UniRef90_Q5HRP4;ec_number=2.4.2.8
contig_1	Pyrodigal	gene	524393	526486	.	+	.	ID=GCA000144955_00478_gene;locus_tag=GCA000144955_00478;gene=ftsH
contig_1	Pyrodigal	CDS	524393	526486	.	+	0	ID=GCA000144955_00478;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA000144955_00478;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004222,GO:0006508,GO:0016020,GO:0016887,GO:0051301;gene=ftsH;Parent=GCA000144955_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0465,COG:O,KEGG:K04083,RefSeq:WP_001167888.1,SO:0001217,UniParc:UPI000002EA3A,UniRef:UniRef100_Q2G0R0,UniRef:UniRef50_P37476,UniRef:UniRef90_A0A0E7WS66
contig_1	Infernal	gene	526568	526781	.	-	.	ID=GCA000144955_00479_gene;locus_tag=GCA000144955_00479;gene=S35
contig_1	Infernal	ncRNA	526568	526781	7.7e-17	-	.	ID=GCA000144955_00479;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00479;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00479_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	526900	527781	.	+	.	ID=GCA000144955_00480_gene;locus_tag=GCA000144955_00480;gene=hslO
contig_1	Pyrodigal	CDS	526900	527781	.	+	0	ID=GCA000144955_00480;Name=Hsp33 family molecular chaperone HslO;locus_tag=GCA000144955_00480;product=Hsp33 family molecular chaperone HslO;Dbxref=GO:0005737,GO:0006457,GO:0042026,GO:0044183,GO:0051082;gene=hslO;Parent=GCA000144955_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04083,RefSeq:WP_000148605.1,SO:0001217,UniParc:UPI0000054634,UniRef:UniRef100_Q2G0Q9,UniRef:UniRef50_P37565,UniRef:UniRef90_Q2G0Q9
contig_1	Pyrodigal	gene	527960	528892	.	+	.	ID=GCA000144955_00481_gene;locus_tag=GCA000144955_00481;gene=cysK
contig_1	Pyrodigal	CDS	527960	528892	.	+	0	ID=GCA000144955_00481;Name=cysteine synthase A;locus_tag=GCA000144955_00481;product=cysteine synthase A;Dbxref=GO:0004124,GO:0006535;gene=cysK;Parent=GCA000144955_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000057594.1,SO:0001217,UniParc:UPI00000D7812,UniRef:UniRef100_Q5HIG2,UniRef:UniRef50_Q5HRP1,UniRef:UniRef90_Q5HRP1;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	529108	529911	.	+	.	ID=GCA000144955_00482_gene;locus_tag=GCA000144955_00482;gene=folP
contig_1	Pyrodigal	CDS	529108	529911	.	+	0	ID=GCA000144955_00482;Name=dihydropteroate synthase;locus_tag=GCA000144955_00482;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0005829,GO:0009396,GO:0046654,GO:0046656,GO:0046872;gene=folP;Parent=GCA000144955_00482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0294,COG:H,KEGG:K00796,RefSeq:WP_000167939.1,SO:0001217,UniParc:UPI0001DD9177,UniRef:UniRef100_A0AAX2MNF1,UniRef:UniRef50_P64141,UniRef:UniRef90_P64141;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	529889	530254	.	+	.	ID=GCA000144955_00483_gene;locus_tag=GCA000144955_00483;gene=folB
contig_1	Pyrodigal	CDS	529889	530254	.	+	0	ID=GCA000144955_00483;Name=dihydroneopterin aldolase;locus_tag=GCA000144955_00483;product=dihydroneopterin aldolase;Dbxref=GO:0004150,GO:0005737,GO:0006760,GO:0016853,GO:0046654,GO:0046656;gene=folB;Parent=GCA000144955_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_001154305.1,SO:0001217,UniParc:UPI0001DD9178,UniRef:UniRef100_UPI0001DD9178,UniRef:UniRef50_Q5HIG0,UniRef:UniRef90_Q5HIG0;ec_number=4.1.2.25
contig_1	Pyrodigal	gene	530251	530727	.	+	.	ID=GCA000144955_00484_gene;locus_tag=GCA000144955_00484;gene=folK
contig_1	Pyrodigal	CDS	530251	530727	.	+	0	ID=GCA000144955_00484;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA000144955_00484;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;Dbxref=GO:0003848,GO:0009396;gene=folK;Parent=GCA000144955_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0801,COG:H,RefSeq:WP_000613724.1,SO:0001217,UniParc:UPI0001DD9179,UniRef:UniRef100_UPI0001DD9179,UniRef:UniRef50_Q2G0Q5,UniRef:UniRef90_Q2G0Q5;ec_number=2.7.6.3
contig_1	Pyrodigal	gene	531269	532756	.	+	.	ID=GCA000144955_00485_gene;locus_tag=GCA000144955_00485;gene=lysS
contig_1	Pyrodigal	CDS	531269	532756	.	+	0	ID=GCA000144955_00485;Name=lysine--tRNA ligase;locus_tag=GCA000144955_00485;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430,GO:0016740;gene=lysS;Parent=GCA000144955_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_001288205.1,SO:0001217,UniParc:UPI0001DD917A,UniRef:UniRef100_UPI0001DD917A,UniRef:UniRef50_Q8YAB8,UniRef:UniRef90_Q4L3H5;ec_number=6.1.1.6
contig_1	Infernal	gene	533314	533428	.	+	.	ID=GCA000144955_00486_gene;locus_tag=GCA000144955_00486;gene=rrf
contig_1	Infernal	rRNA	533314	533428	1.1e-14	+	.	ID=GCA000144955_00486;Name=5S ribosomal RNA;locus_tag=GCA000144955_00486;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_00486_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	533441	533516	.	+	.	ID=GCA000144955_00487_gene;locus_tag=GCA000144955_00487;gene=trnV
contig_1	tRNAscan-SE	tRNA	533441	533516	.	+	.	ID=GCA000144955_00487;Name=tRNA-Val(tac);locus_tag=GCA000144955_00487;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000144955_00487_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	533533	533608	.	+	.	ID=GCA000144955_00488_gene;locus_tag=GCA000144955_00488;gene=trnT
contig_1	tRNAscan-SE	tRNA	533533	533608	.	+	.	ID=GCA000144955_00488;Name=tRNA-Thr(tgt);locus_tag=GCA000144955_00488;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000144955_00488_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	533615	533687	.	+	.	ID=GCA000144955_00489_gene;locus_tag=GCA000144955_00489;gene=trnK
contig_1	tRNAscan-SE	tRNA	533615	533687	.	+	.	ID=GCA000144955_00489;Name=tRNA-Lys(ttt);locus_tag=GCA000144955_00489;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000144955_00489_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	533721	533795	.	+	.	ID=GCA000144955_00490_gene;locus_tag=GCA000144955_00490;gene=trnG
contig_1	tRNAscan-SE	tRNA	533721	533795	.	+	.	ID=GCA000144955_00490;Name=tRNA-Gly(gcc);locus_tag=GCA000144955_00490;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000144955_00490_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	533803	533891	.	+	.	ID=GCA000144955_00491_gene;locus_tag=GCA000144955_00491;gene=trnL
contig_1	tRNAscan-SE	tRNA	533803	533891	.	+	.	ID=GCA000144955_00491;Name=tRNA-Leu(taa);locus_tag=GCA000144955_00491;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000144955_00491_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	533897	533973	.	+	.	ID=GCA000144955_00492_gene;locus_tag=GCA000144955_00492;gene=trnR
contig_1	tRNAscan-SE	tRNA	533897	533973	.	+	.	ID=GCA000144955_00492;Name=tRNA-Arg(acg);locus_tag=GCA000144955_00492;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000144955_00492_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	533994	534067	.	+	.	ID=GCA000144955_00493_gene;locus_tag=GCA000144955_00493;gene=trnP
contig_1	tRNAscan-SE	tRNA	533994	534067	.	+	.	ID=GCA000144955_00493;Name=tRNA-Pro(tgg);locus_tag=GCA000144955_00493;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000144955_00493_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	534091	534166	.	+	.	ID=GCA000144955_00494_gene;locus_tag=GCA000144955_00494;gene=trnA
contig_1	tRNAscan-SE	tRNA	534091	534166	.	+	.	ID=GCA000144955_00494;Name=tRNA-Ala(tgc);locus_tag=GCA000144955_00494;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000144955_00494_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Infernal	gene	534288	535839	.	+	.	ID=GCA000144955_00495_gene;locus_tag=GCA000144955_00495;gene=rrs
contig_1	Infernal	rRNA	534288	535839	1.3e-49	+	.	ID=GCA000144955_00495;Name=16S ribosomal RNA;locus_tag=GCA000144955_00495;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_00495_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	535934	536010	.	+	.	ID=GCA000144955_00496_gene;locus_tag=GCA000144955_00496;gene=trnI
contig_1	tRNAscan-SE	tRNA	535934	536010	.	+	.	ID=GCA000144955_00496;Name=tRNA-Ile(gat);locus_tag=GCA000144955_00496;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000144955_00496_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	536178	539100	.	+	.	ID=GCA000144955_00497_gene;locus_tag=GCA000144955_00497;gene=rrl
contig_1	Infernal	rRNA	536178	539100	1.4e-06	+	.	ID=GCA000144955_00497;Name=23S ribosomal RNA;locus_tag=GCA000144955_00497;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_00497_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	539173	539287	.	+	.	ID=GCA000144955_00498_gene;locus_tag=GCA000144955_00498;gene=rrf
contig_1	Infernal	rRNA	539173	539287	1.1e-14	+	.	ID=GCA000144955_00498;Name=5S ribosomal RNA;locus_tag=GCA000144955_00498;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_00498_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	539500	541051	.	+	.	ID=GCA000144955_00499_gene;locus_tag=GCA000144955_00499;gene=rrs
contig_1	Infernal	rRNA	539500	541051	1.5e-49	+	.	ID=GCA000144955_00499;Name=16S ribosomal RNA;locus_tag=GCA000144955_00499;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_00499_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Infernal	gene	541477	544399	.	+	.	ID=GCA000144955_00500_gene;locus_tag=GCA000144955_00500;gene=rrl
contig_1	Infernal	rRNA	541477	544399	1.4e-06	+	.	ID=GCA000144955_00500;Name=23S ribosomal RNA;locus_tag=GCA000144955_00500;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_00500_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	544473	544587	.	+	.	ID=GCA000144955_00501_gene;locus_tag=GCA000144955_00501;gene=rrf
contig_1	Infernal	rRNA	544473	544587	1.1e-14	+	.	ID=GCA000144955_00501;Name=5S ribosomal RNA;locus_tag=GCA000144955_00501;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_00501_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	545391	546773	.	-	.	ID=GCA000144955_00502_gene;locus_tag=GCA000144955_00502;gene=aRO8
contig_1	Pyrodigal	CDS	545391	546773	.	-	0	ID=GCA000144955_00502;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000144955_00502;product=HTH gntR-type domain-containing protein;gene=aRO8;Parent=GCA000144955_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1167,COG:KE,KEGG:K00375,RefSeq:WP_000799262.1,SO:0001217,UniParc:UPI0001DD917B,UniRef:UniRef100_UPI0001DD917B,UniRef:UniRef50_Q2G0Q2,UniRef:UniRef90_Q2G0Q2
contig_1	Pyrodigal	gene	546925	547764	.	+	.	ID=GCA000144955_00503_gene;locus_tag=GCA000144955_00503;gene=pdxS
contig_1	Pyrodigal	CDS	546925	547764	.	+	0	ID=GCA000144955_00503;Name=pyridoxal 5'-phosphate synthase subunit PdxS;locus_tag=GCA000144955_00503;product=pyridoxal 5'-phosphate synthase subunit PdxS;Dbxref=GO:0003824,GO:0006520,GO:0008615,GO:0036381,GO:0042823;gene=pdxS;Parent=GCA000144955_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003247145,COG:COG0214,COG:H,KEGG:K06215,SO:0001217,UniRef:UniRef50_P37527,UniRef:UniRef90_Q2G0Q1;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	547768	548358	.	+	.	ID=GCA000144955_00504_gene;locus_tag=GCA000144955_00504;gene=pdxT
contig_1	Pyrodigal	CDS	547768	548358	.	+	0	ID=GCA000144955_00504;Name=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;locus_tag=GCA000144955_00504;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;Dbxref=GO:0004359,GO:0016884,GO:0042823;gene=pdxT;Parent=GCA000144955_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08681,RefSeq:WP_000690440.1,SO:0001217,UniParc:UPI000197ABB9,UniRef:UniRef100_UPI000197ABB9,UniRef:UniRef50_Q2G0Q0,UniRef:UniRef90_A0A7U7JT14;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	548535	549749	.	-	.	ID=GCA000144955_00505_gene;locus_tag=GCA000144955_00505;gene=nupC
contig_1	Pyrodigal	CDS	548535	549749	.	-	0	ID=GCA000144955_00505;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000144955_00505;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000144955_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_000557121.1,SO:0001217,UniParc:UPI0001DD917D,UniRef:UniRef100_UPI0001DD917D,UniRef:UniRef50_Q2G0P9,UniRef:UniRef90_Q2G0P9
contig_1	Pyrodigal	gene	549898	550368	.	+	.	ID=GCA000144955_00506_gene;locus_tag=GCA000144955_00506;gene=ctsR
contig_1	Pyrodigal	CDS	549898	550368	.	+	0	ID=GCA000144955_00506;Name=Transcriptional regulator CtsR;locus_tag=GCA000144955_00506;product=Transcriptional regulator CtsR;Dbxref=GO:0003677,GO:0006355;gene=ctsR;Parent=GCA000144955_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4463,COG:K,SO:0001217,UniParc:UPI0001D1697E,UniRef:UniRef100_Q2G0P8,UniRef:UniRef50_Q2G0P8,UniRef:UniRef90_Q2G0P8
contig_1	Pyrodigal	gene	550387	550953	.	+	.	ID=GCA000144955_00507_gene;locus_tag=GCA000144955_00507;gene=mcsA
contig_1	Pyrodigal	CDS	550387	550953	.	+	0	ID=GCA000144955_00507;Name=Protein-arginine kinase activator protein;locus_tag=GCA000144955_00507;product=Protein-arginine kinase activator protein;Dbxref=GO:0003677,GO:0005507,GO:0008270,GO:0046870,GO:0050897,GO:1990169,GO:1990170;gene=mcsA;Parent=GCA000144955_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3880,COG:O,RefSeq:WP_000882069.1,SO:0001217,UniParc:UPI00000D7700,UniRef:UniRef100_Q2G0P7,UniRef:UniRef50_Q2G0P7,UniRef:UniRef90_Q2G0P7
contig_1	Pyrodigal	gene	550940	551950	.	+	.	ID=GCA000144955_00508_gene;locus_tag=GCA000144955_00508;gene=mcsB
contig_1	Pyrodigal	CDS	550940	551950	.	+	0	ID=GCA000144955_00508;Name=protein arginine kinase;locus_tag=GCA000144955_00508;product=protein arginine kinase;Dbxref=GO:0004111,GO:0004672,GO:0005524,GO:0005615,GO:0046314;gene=mcsB;Parent=GCA000144955_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3869,COG:O,SO:0001217,UniRef:UniRef50_Q2G0P6,UniRef:UniRef90_Q2G0P6;ec_number=2.7.14.1
contig_1	Pyrodigal	gene	551964	554420	.	+	.	ID=GCA000144955_00509_gene;locus_tag=GCA000144955_00509;gene=clpC
contig_1	Pyrodigal	CDS	551964	554420	.	+	0	ID=GCA000144955_00509;Name=ATP-dependent Clp protease ATP-binding subunit ClpC;locus_tag=GCA000144955_00509;product=ATP-dependent Clp protease ATP-binding subunit ClpC;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpC;Parent=GCA000144955_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000897132.1,SO:0001217,UniParc:UPI000005484F,UniRef:UniRef100_Q2G0P5,UniRef:UniRef50_Q2G0P5,UniRef:UniRef90_Q2G0P5
contig_1	Pyrodigal	gene	554900	556264	.	+	.	ID=GCA000144955_00510_gene;locus_tag=GCA000144955_00510;gene=radA
contig_1	Pyrodigal	CDS	554900	556264	.	+	0	ID=GCA000144955_00510;Name=DNA repair protein RadA;locus_tag=GCA000144955_00510;product=DNA repair protein RadA;Dbxref=GO:0003684,GO:0005524,GO:0006281;gene=radA;Parent=GCA000144955_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_001085219.1,SO:0001217,UniParc:UPI00000D77F2,UniRef:UniRef100_W8U6A9,UniRef:UniRef50_A5GDK5,UniRef:UniRef90_A0A380G4B0
contig_1	Pyrodigal	gene	556289	557362	.	+	.	ID=GCA000144955_00511_gene;locus_tag=GCA000144955_00511
contig_1	Pyrodigal	CDS	556289	557362	.	+	0	ID=GCA000144955_00511;Name=TRAM domain-containing protein;locus_tag=GCA000144955_00511;product=TRAM domain-containing protein;Parent=GCA000144955_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4956,COG:R,RefSeq:WP_001028374.1,SO:0001217,UniParc:UPI0001DD917F,UniRef:UniRef100_UPI0001DD917F,UniRef:UniRef50_A0A9X6AJN5,UniRef:UniRef90_Q2G242
contig_1	Pyrodigal	gene	557920	559374	.	+	.	ID=GCA000144955_00512_gene;locus_tag=GCA000144955_00512;gene=gltX
contig_1	Pyrodigal	CDS	557920	559374	.	+	0	ID=GCA000144955_00512;Name=glutamate--tRNA ligase;locus_tag=GCA000144955_00512;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000144955_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_001283787.1,SO:0001217,UniParc:UPI00003B1443,UniRef:UniRef100_Q6GJE1,UniRef:UniRef50_Q97NG1,UniRef:UniRef90_Q2G241;ec_number=6.1.1.17
contig_1	Pyrodigal	gene	559765	560445	.	+	.	ID=GCA000144955_00513_gene;locus_tag=GCA000144955_00513;gene=cysE
contig_1	Pyrodigal	CDS	559765	560445	.	+	0	ID=GCA000144955_00513;Name=serine O-acetyltransferase;locus_tag=GCA000144955_00513;product=serine O-acetyltransferase;Dbxref=GO:0005737,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000144955_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1045,COG:E,RefSeq:WP_001547606.1,SO:0001217,UniParc:UPI000175C520,UniRef:UniRef100_Q6GJE0,UniRef:UniRef50_A8F961,UniRef:UniRef90_Q5HRM4;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	560429	561829	.	+	.	ID=GCA000144955_00514_gene;locus_tag=GCA000144955_00514;gene=cysS
contig_1	Pyrodigal	CDS	560429	561829	.	+	0	ID=GCA000144955_00514;Name=cysteine--tRNA ligase;locus_tag=GCA000144955_00514;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000144955_00514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_000631963.1,SO:0001217,UniParc:UPI00004B5B2E,UniRef:UniRef100_Q2G2M6,UniRef:UniRef50_Q06752,UniRef:UniRef90_Q2G2M6;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	561822	562226	.	+	.	ID=GCA000144955_00515_gene;locus_tag=GCA000144955_00515;gene=mrnC
contig_1	Pyrodigal	CDS	561822	562226	.	+	0	ID=GCA000144955_00515;Name=Mini-ribonuclease 3;locus_tag=GCA000144955_00515;product=Mini-ribonuclease 3;Dbxref=GO:0004525,GO:0005737,GO:0006364,GO:0019843;gene=mrnC;Parent=GCA000144955_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1939,COG:J,RefSeq:WP_000370183.1,SO:0001217,UniParc:UPI0001DD9180,UniRef:UniRef100_UPI0001DD9180,UniRef:UniRef50_Q2G2M4,UniRef:UniRef90_Q2G2M4;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	562234	562980	.	+	.	ID=GCA000144955_00516_gene;locus_tag=GCA000144955_00516;gene=rlmB
contig_1	Pyrodigal	CDS	562234	562980	.	+	0	ID=GCA000144955_00516;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000144955_00516;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259;gene=rlmB;Parent=GCA000144955_00516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000390331.1,SO:0001217,UniParc:UPI0001DD9181,UniRef:UniRef100_UPI0001DD9181,UniRef:UniRef50_Q49V41,UniRef:UniRef90_Q99W72;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	562980	563504	.	+	.	ID=GCA000144955_00517_gene;locus_tag=GCA000144955_00517;gene=rae1
contig_1	Pyrodigal	CDS	562980	563504	.	+	0	ID=GCA000144955_00517;Name=NYN domain-containing protein;locus_tag=GCA000144955_00517;product=NYN domain-containing protein;gene=rae1;Parent=GCA000144955_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3688,COG:J,KEGG:K06962,RefSeq:WP_000664741.1,SO:0001217,UniParc:UPI0001DD9182,UniRef:UniRef100_UPI0001DD9182,UniRef:UniRef50_Q49V42,UniRef:UniRef90_Q2G2M5
contig_1	Pyrodigal	gene	563585	564154	.	+	.	ID=GCA000144955_00518_gene;locus_tag=GCA000144955_00518;gene=rpoE
contig_1	Pyrodigal	CDS	563585	564154	.	+	0	ID=GCA000144955_00518;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000144955_00518;product=RNA polymerase sigma factor SigS;gene=rpoE;Parent=GCA000144955_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_000872876.1,SO:0001217,UniParc:UPI0001DD9183,UniRef:UniRef100_UPI0001DD9183,UniRef:UniRef50_Q2G0P4,UniRef:UniRef90_Q2G0P4
contig_1	Pyrodigal	gene	564468	564650	.	+	.	ID=GCA000144955_00519_gene;locus_tag=GCA000144955_00519;gene=secE
contig_1	Pyrodigal	CDS	564468	564650	.	+	0	ID=GCA000144955_00519;Name=preprotein translocase subunit SecE;locus_tag=GCA000144955_00519;product=preprotein translocase subunit SecE;Dbxref=GO:0005886,GO:0006605,GO:0008320,GO:0009306,GO:0015450,GO:0043952,GO:0065002;gene=secE;Parent=GCA000144955_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_001074473.1,SO:0001217,UniParc:UPI000013579E,UniRef:UniRef100_P0A0I4,UniRef:UniRef50_P0A0I4,UniRef:UniRef90_P0A0I4
contig_1	Pyrodigal	gene	564663	565211	.	+	.	ID=GCA000144955_00520_gene;locus_tag=GCA000144955_00520;gene=nusG
contig_1	Pyrodigal	CDS	564663	565211	.	+	0	ID=GCA000144955_00520;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000144955_00520;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0006353,GO:0031564,GO:0032784,GO:0140673;gene=nusG;Parent=GCA000144955_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,RefSeq:WP_001288302.1,SO:0001217,UniParc:UPI0000054843,UniRef:UniRef100_Q2G0P2,UniRef:UniRef50_Q2G0P2,UniRef:UniRef90_Q2G0P2
contig_1	Pyrodigal	gene	565392	565814	.	+	.	ID=GCA000144955_00521_gene;locus_tag=GCA000144955_00521;gene=rplK
contig_1	Pyrodigal	CDS	565392	565814	.	+	0	ID=GCA000144955_00521;Name=50S ribosomal protein L11;locus_tag=GCA000144955_00521;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000144955_00521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_001085792.1,SO:0001217,UniParc:UPI0000165A2E,UniRef:UniRef100_P0A0F4,UniRef:UniRef50_P0A0F4,UniRef:UniRef90_P0A0F4
contig_1	Pyrodigal	gene	566022	566714	.	+	.	ID=GCA000144955_00522_gene;locus_tag=GCA000144955_00522;gene=rplA
contig_1	Pyrodigal	CDS	566022	566714	.	+	0	ID=GCA000144955_00522;Name=50S ribosomal protein L1;locus_tag=GCA000144955_00522;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843;gene=rplA;Parent=GCA000144955_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_001074619.1,SO:0001217,UniParc:UPI0000054841,UniRef:UniRef100_Q2G0P0,UniRef:UniRef50_Q5M2K0,UniRef:UniRef90_Q2G0P0
contig_1	Infernal	regulatory_region	566802	566948	8.2e-11	+	.	ID=BPGLLONNDN_178;Name=Ribosomal protein L10 leader;product=Ribosomal protein L10 leader;Dbxref=RFAM:RF00557;inference=profile:Rfam:RF00557;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	566986	567486	.	+	.	ID=GCA000144955_00523_gene;locus_tag=GCA000144955_00523;gene=rplJ
contig_1	Pyrodigal	CDS	566986	567486	.	+	0	ID=GCA000144955_00523;Name=50S ribosomal protein L10;locus_tag=GCA000144955_00523;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0070180;gene=rplJ;Parent=GCA000144955_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_001273085.1,SO:0001217,UniParc:UPI0000054840,UniRef:UniRef100_Q2G0N9,UniRef:UniRef50_P66042,UniRef:UniRef90_Q2G0N9
contig_1	Pyrodigal	gene	567529	567897	.	+	.	ID=GCA000144955_00524_gene;locus_tag=GCA000144955_00524;gene=rplL
contig_1	Pyrodigal	CDS	567529	567897	.	+	0	ID=GCA000144955_00524;Name=50S ribosomal protein L7/L12;locus_tag=GCA000144955_00524;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA000144955_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_001273586.1,SO:0001217,UniParc:UPI0000052289,UniRef:UniRef100_P48860,UniRef:UniRef50_P48860,UniRef:UniRef90_P48860
contig_1	Pyrodigal	gene	568072	568680	.	+	.	ID=GCA000144955_00525_gene;locus_tag=GCA000144955_00525;gene=rsmC
contig_1	Pyrodigal	CDS	568072	568680	.	+	0	ID=GCA000144955_00525;Name=Methyltransferase small domain-containing protein;locus_tag=GCA000144955_00525;product=Methyltransferase small domain-containing protein;gene=rsmC;Parent=GCA000144955_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_000020295.1,SO:0001217,UniParc:UPI0001B3B4B0,UniRef:UniRef100_A0A0U1MEQ4,UniRef:UniRef50_A0A556PLC6,UniRef:UniRef90_Q2G0N7
contig_1	Pyrodigal	gene	568895	572446	.	+	.	ID=GCA000144955_00526_gene;locus_tag=GCA000144955_00526;gene=rpoB
contig_1	Pyrodigal	CDS	568895	572446	.	+	0	ID=GCA000144955_00526;Name=DNA-directed RNA polymerase subunit beta;locus_tag=GCA000144955_00526;product=DNA-directed RNA polymerase subunit beta;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA000144955_00526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_000918667.1,SO:0001217,UniParc:UPI00000D771C,UniRef:UniRef100_P47768,UniRef:UniRef50_P47768,UniRef:UniRef90_P47768;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	572583	576206	.	+	.	ID=GCA000144955_00527_gene;locus_tag=GCA000144955_00527;gene=rpoC
contig_1	Pyrodigal	CDS	572583	576206	.	+	0	ID=GCA000144955_00527;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000144955_00527;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000144955_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,SO:0001217,UniParc:UPI00003B144D,UniRef:UniRef100_Q6GJC5,UniRef:UniRef50_P37871,UniRef:UniRef90_Q2G0N5;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	576343	576597	.	+	.	ID=GCA000144955_00528_gene;locus_tag=GCA000144955_00528;gene=rpl7Ae
contig_1	Pyrodigal	CDS	576343	576597	.	+	0	ID=GCA000144955_00528;Name=RNA-binding protein MW0499;locus_tag=GCA000144955_00528;product=RNA-binding protein MW0499;Dbxref=GO:0003723;gene=rpl7Ae;Parent=GCA000144955_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1358,COG:J,KEGG:K07590,RefSeq:WP_000031892.1,SO:0001217,UniParc:UPI00001353D9,UniRef:UniRef100_P0A0G6,UniRef:UniRef50_P0A0G6,UniRef:UniRef90_P0A0G6
contig_1	Pyrodigal	gene	576695	577108	.	+	.	ID=GCA000144955_00529_gene;locus_tag=GCA000144955_00529;gene=rpsL
contig_1	Pyrodigal	CDS	576695	577108	.	+	0	ID=GCA000144955_00529;Name=30S ribosomal protein S12;locus_tag=GCA000144955_00529;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsL;Parent=GCA000144955_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,KEGG:K02950,RefSeq:WP_014532739.1,SO:0001217,UniParc:UPI0001DD9327,UniRef:UniRef100_UPI0001DD9327,UniRef:UniRef50_P0A0H0,UniRef:UniRef90_P0A0H0
contig_1	Pyrodigal	gene	577174	577644	.	+	.	ID=GCA000144955_00530_gene;locus_tag=GCA000144955_00530;gene=rpsG
contig_1	Pyrodigal	CDS	577174	577644	.	+	0	ID=GCA000144955_00530;Name=30S ribosomal protein S7;locus_tag=GCA000144955_00530;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000144955_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_001137495.1,SO:0001217,UniParc:UPI000004801A,UniRef:UniRef100_P48940,UniRef:UniRef50_P02359,UniRef:UniRef90_P48940
contig_1	Pyrodigal	gene	577767	579848	.	+	.	ID=GCA000144955_00531_gene;locus_tag=GCA000144955_00531;gene=fusA
contig_1	Pyrodigal	CDS	577767	579848	.	+	0	ID=GCA000144955_00531;Name=elongation factor G FusA;locus_tag=GCA000144955_00531;product=elongation factor G FusA;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790;gene=fusA;Parent=GCA000144955_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_000090315.1,SO:0001217,UniParc:UPI0000052287,UniRef:UniRef100_Q2G0N1,UniRef:UniRef50_Q9SI75,UniRef:UniRef90_Q2G0N1
contig_1	Pyrodigal	gene	580065	581249	.	+	.	ID=GCA000144955_00532_gene;locus_tag=GCA000144955_00532;gene=tuf
contig_1	Pyrodigal	CDS	580065	581249	.	+	0	ID=GCA000144955_00532;Name=elongation factor Tu;locus_tag=GCA000144955_00532;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414;gene=tuf;Parent=GCA000144955_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_001040568.1,SO:0001217,UniParc:UPI0000054837,UniRef:UniRef100_Q2G0N0,UniRef:UniRef50_Q74JU6,UniRef:UniRef90_Q2G0N0
contig_1	Pyrodigal	gene	581531	582706	.	-	.	ID=GCA000144955_00533_gene;locus_tag=GCA000144955_00533;gene=abgB
contig_1	Pyrodigal	CDS	581531	582706	.	-	0	ID=GCA000144955_00533;Name=Peptidase;locus_tag=GCA000144955_00533;product=Peptidase;gene=abgB;Parent=GCA000144955_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_000887905.1,SO:0001217,UniParc:UPI0001DD9328,UniRef:UniRef100_UPI0001DD9328,UniRef:UniRef50_A0A2I7Y808,UniRef:UniRef90_A0A2I7Y808
contig_1	Pyrodigal	gene	582877	584064	.	+	.	ID=GCA000144955_00534_gene;locus_tag=GCA000144955_00534;gene=bioF
contig_1	Pyrodigal	CDS	582877	584064	.	+	0	ID=GCA000144955_00534;Name=glycine C-acetyltransferase;locus_tag=GCA000144955_00534;product=glycine C-acetyltransferase;Dbxref=GO:0008890,GO:0009058,GO:0016740,GO:0030170;gene=bioF;Parent=GCA000144955_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000250828.1,SO:0001217,UniParc:UPI0001DD9329,UniRef:UniRef100_A0A2S6D4N0,UniRef:UniRef50_Q73KM3,UniRef:UniRef90_P60121;ec_number=2.3.1.29
contig_1	Pyrodigal	gene	584330	585208	.	+	.	ID=GCA000144955_00535_gene;locus_tag=GCA000144955_00535;gene=hchA
contig_1	Pyrodigal	CDS	584330	585208	.	+	0	ID=GCA000144955_00535;Name=glyoxalase III HchA;locus_tag=GCA000144955_00535;product=glyoxalase III HchA;Dbxref=GO:0005737,GO:0006281,GO:0016790,GO:0019172,GO:0019243,GO:0030091,GO:0036524;gene=hchA;Parent=GCA000144955_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,KEGG:K05523,RefSeq:WP_000076402.1,SO:0001217,UniParc:UPI0001DD932A,UniRef:UniRef100_UPI0001DD932A,UniRef:UniRef50_Q2G0M7,UniRef:UniRef90_Q2G0M7;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	585366	587003	.	+	.	ID=GCA000144955_00536_gene;locus_tag=GCA000144955_00536;gene=araB
contig_1	Pyrodigal	CDS	585366	587003	.	+	0	ID=GCA000144955_00536;Name=ribulokinase;locus_tag=GCA000144955_00536;product=ribulokinase;Dbxref=GO:0005524,GO:0005737,GO:0008741,GO:0019150,GO:0019569;gene=araB;Parent=GCA000144955_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1069,COG:G,RefSeq:WP_000122351.1,SO:0001217,UniParc:UPI0001DD932B,UniRef:UniRef100_UPI0001DD932B,UniRef:UniRef50_Q2G0M6,UniRef:UniRef90_Q2G0M6;ec_number=2.7.1.16
contig_1	Pyrodigal	gene	587217	588182	.	+	.	ID=GCA000144955_00537_gene;locus_tag=GCA000144955_00537;gene=wcaG
contig_1	Pyrodigal	CDS	587217	588182	.	+	0	ID=GCA000144955_00537;Name=putative epimerase/dehydratase SAR0558;locus_tag=GCA000144955_00537;product=putative epimerase/dehydratase SAR0558;Dbxref=GO:0006567,GO:0008743;gene=wcaG;Parent=GCA000144955_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000723301.1,SO:0001217,UniParc:UPI0000054831,UniRef:UniRef100_Q2G0M5,UniRef:UniRef50_Q2G0M5,UniRef:UniRef90_Q2G0M5
contig_1	Pyrodigal	gene	588518	589594	.	+	.	ID=GCA000144955_00538_gene;locus_tag=GCA000144955_00538;gene=ilvE
contig_1	Pyrodigal	CDS	588518	589594	.	+	0	ID=GCA000144955_00538;Name=branched-chain amino acid aminotransferase;locus_tag=GCA000144955_00538;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081,GO:0009097,GO:0009098,GO:0009099,GO:0052655,GO:0052656;gene=ilvE;Parent=GCA000144955_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_000076033.1,SO:0001217,UniParc:UPI0001DD932C,UniRef:UniRef100_UPI0001DD932C,UniRef:UniRef50_Q8CQ78,UniRef:UniRef90_Q5HIC1;ec_number=2.6.1.42
contig_1	Pyrodigal	gene	589845	590528	.	+	.	ID=GCA000144955_00539_gene;locus_tag=GCA000144955_00539;gene=gph
contig_1	Pyrodigal	CDS	589845	590528	.	+	0	ID=GCA000144955_00539;Name=HAD family hydrolase;locus_tag=GCA000144955_00539;product=HAD family hydrolase;gene=gph;Parent=GCA000144955_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000454782.1,SO:0001217,UniParc:UPI0001DD932D,UniRef:UniRef100_UPI0001DD932D,UniRef:UniRef50_A0A2Y2GZN0,UniRef:UniRef90_A0A2Y2GZN0
contig_1	Pyrodigal	gene	590644	591306	.	-	.	ID=GCA000144955_00540_gene;locus_tag=GCA000144955_00540;gene=dck
contig_1	Pyrodigal	CDS	590644	591306	.	-	0	ID=GCA000144955_00540;Name=Deoxyadenosine/deoxycytidine kinase;locus_tag=GCA000144955_00540;product=Deoxyadenosine/deoxycytidine kinase;gene=dck;Parent=GCA000144955_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,RefSeq:WP_001067259.1,SO:0001217,UniParc:UPI0001DD932E,UniRef:UniRef100_A0A6B1RL37,UniRef:UniRef50_P37529,UniRef:UniRef90_A0A0U1MET2
contig_1	Pyrodigal	gene	591299	591916	.	-	.	ID=GCA000144955_00541_gene;locus_tag=GCA000144955_00541;gene=dck
contig_1	Pyrodigal	CDS	591299	591916	.	-	0	ID=GCA000144955_00541;Name=Deoxynucleoside kinase domain-containing protein;locus_tag=GCA000144955_00541;product=Deoxynucleoside kinase domain-containing protein;gene=dck;Parent=GCA000144955_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,KEGG:K15518,RefSeq:WP_001039520.1,SO:0001217,UniParc:UPI0001DD932F,UniRef:UniRef100_UPI0001DD932F,UniRef:UniRef50_A0A380GAH5,UniRef:UniRef90_Q2G0M0;ec_number=2.7.1.113
contig_1	Pyrodigal	gene	591983	592453	.	+	.	ID=GCA000144955_00542_gene;locus_tag=GCA000144955_00542;gene=tadA
contig_1	Pyrodigal	CDS	591983	592453	.	+	0	ID=GCA000144955_00542;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA000144955_00542;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270,GO:0052717;gene=tadA;Parent=GCA000144955_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_000180281.1,SO:0001217,UniParc:UPI000005482B,UniRef:UniRef100_Q99W51,UniRef:UniRef50_Q99W51,UniRef:UniRef90_Q99W51;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	592600	593469	.	+	.	ID=GCA000144955_00543_gene;locus_tag=GCA000144955_00543
contig_1	Pyrodigal	CDS	592600	593469	.	+	0	ID=GCA000144955_00543;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000144955_00543;product=Cof-type HAD-IIB family hydrolase;Parent=GCA000144955_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21064,RefSeq:WP_000593371.1,SO:0001217,UniParc:UPI0001DD9330,UniRef:UniRef100_UPI0001DD9330,UniRef:UniRef50_Q2G0L8,UniRef:UniRef90_A0A2K4AEI2;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	593489	594055	.	+	.	ID=GCA000144955_00544_gene;locus_tag=GCA000144955_00544;gene=azo1
contig_1	Pyrodigal	CDS	593489	594055	.	+	0	ID=GCA000144955_00544;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000144955_00544;product=FMN-dependent NADPH-azoreductase;Dbxref=GO:0005829,GO:0010181,GO:0016491;gene=azo1;Parent=GCA000144955_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,RefSeq:WP_000677253.1,SO:0001217,UniParc:UPI0001DD9331,UniRef:UniRef100_UPI0001DD9331,UniRef:UniRef50_Q2G0L7,UniRef:UniRef90_Q2G0L7;ec_number=1.7.-.-
contig_1	Pyrodigal	gene	594486	597668	.	+	.	ID=GCA000144955_00545_gene;locus_tag=GCA000144955_00545;gene=sdrC
contig_1	Pyrodigal	CDS	594486	597668	.	+	0	ID=GCA000144955_00545;Name=MSCRAMM family adhesin SdrC;locus_tag=GCA000144955_00545;product=MSCRAMM family adhesin SdrC;Dbxref=GO:0007155;gene=sdrC;Parent=GCA000144955_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_103245960.1,SO:0001217,UniParc:UPI000CD04B56,UniRef:UniRef100_UPI000CD04B56,UniRef:UniRef50_A0A7Z1SDM7,UniRef:UniRef90_UPI000CD04B56
contig_1	Pyrodigal	gene	598034	602167	.	+	.	ID=GCA000144955_00546_gene;locus_tag=GCA000144955_00546;gene=sdrD
contig_1	Pyrodigal	CDS	598034	602167	.	+	0	ID=GCA000144955_00546;Name=MSCRAMM family adhesin SdrD;locus_tag=GCA000144955_00546;product=MSCRAMM family adhesin SdrD;Dbxref=GO:0007155;gene=sdrD;Parent=GCA000144955_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000934502.1,SO:0001217,UniParc:UPI0001DD9333,UniRef:UniRef100_UPI0001DD9333,UniRef:UniRef50_A0A0E1XIG1,UniRef:UniRef90_A0A077ULL5
contig_1	Pyrodigal	gene	602565	606008	.	+	.	ID=GCA000144955_00547_gene;locus_tag=GCA000144955_00547;gene=sdrE
contig_1	Pyrodigal	CDS	602565	606008	.	+	0	ID=GCA000144955_00547;Name=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;locus_tag=GCA000144955_00547;product=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;Dbxref=GO:0005576,GO:0007155;gene=sdrE;Parent=GCA000144955_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4932,COG:M,RefSeq:WP_000610281.1,SO:0001217,UniParc:UPI0001DD9334,UniRef:UniRef100_UPI0001DD9334,UniRef:UniRef50_Q14U76,UniRef:UniRef90_Q932F7,VFDB:VFC0001,VFDB:VFG001281
contig_1	Pyrodigal	gene	606127	607599	.	+	.	ID=GCA000144955_00548_gene;locus_tag=GCA000144955_00548;gene=rfaB
contig_1	Pyrodigal	CDS	606127	607599	.	+	0	ID=GCA000144955_00548;Name=Glycosyltransferase;locus_tag=GCA000144955_00548;product=Glycosyltransferase;gene=rfaB;Parent=GCA000144955_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106721.1,SO:0001217,UniParc:UPI0001DD9335,UniRef:UniRef100_UPI0001DD9335,UniRef:UniRef50_A0AAE2ZQD7,UniRef:UniRef90_A0AAE2ZQD7
contig_1	Pyrodigal	gene	607723	609213	.	-	.	ID=GCA000144955_00549_gene;locus_tag=GCA000144955_00549;gene=rfaB
contig_1	Pyrodigal	CDS	607723	609213	.	-	0	ID=GCA000144955_00549;Name=Glycosyl transferase family 1 domain-containing protein;locus_tag=GCA000144955_00549;product=Glycosyl transferase family 1 domain-containing protein;gene=rfaB;Parent=GCA000144955_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106121.1,SO:0001217,UniParc:UPI0001DD9336,UniRef:UniRef100_UPI0001DD9336,UniRef:UniRef50_Q2G0L2,UniRef:UniRef90_Q2G0L2
contig_1	Pyrodigal	gene	609496	610374	.	-	.	ID=GCA000144955_00550_gene;locus_tag=GCA000144955_00550;gene=folE2
contig_1	Pyrodigal	CDS	609496	610374	.	-	0	ID=GCA000144955_00550;Name=GTP cyclohydrolase FolE2;locus_tag=GCA000144955_00550;product=GTP cyclohydrolase FolE2;Dbxref=GO:0003933,GO:0003934,GO:0046654;gene=folE2;Parent=GCA000144955_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1469,COG:H,KEGG:K09007,RefSeq:WP_000134232.1,SO:0001217,UniParc:UPI0000054823,UniRef:UniRef100_Q2G0L1,UniRef:UniRef50_Q2G0L1,UniRef:UniRef90_Q2G0L1;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	610387	611052	.	-	.	ID=GCA000144955_00551_gene;locus_tag=GCA000144955_00551;gene=bshB2
contig_1	Pyrodigal	CDS	610387	611052	.	-	0	ID=GCA000144955_00551;Name=bacillithiol biosynthesis deacetylase BshB2;locus_tag=GCA000144955_00551;product=bacillithiol biosynthesis deacetylase BshB2;Dbxref=GO:0019213;gene=bshB2;Parent=GCA000144955_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2120,COG:G,KEGG:K22135,RefSeq:WP_000129076.1,SO:0001217,UniParc:UPI0001DD9337,UniRef:UniRef100_UPI0001DD9337,UniRef:UniRef50_A0A8J4SJ37,UniRef:UniRef90_Q2G0L0;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	611066	611428	.	-	.	ID=GCA000144955_00552_gene;locus_tag=GCA000144955_00552
contig_1	Pyrodigal	CDS	611066	611428	.	-	0	ID=GCA000144955_00552;Name=DUF1806 domain-containing protein;locus_tag=GCA000144955_00552;product=DUF1806 domain-containing protein;Parent=GCA000144955_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_078055750.1,SO:0001217,UniParc:UPI00098E9D4A,UniRef:UniRef100_UPI00098E9D4A,UniRef:UniRef50_A0A7U7JT15,UniRef:UniRef90_A0A7U7JT15
contig_1	Pyrodigal	gene	611705	612463	.	+	.	ID=GCA000144955_00553_gene;locus_tag=GCA000144955_00553;gene=nagB
contig_1	Pyrodigal	CDS	611705	612463	.	+	0	ID=GCA000144955_00553;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000144955_00553;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0005737,GO:0005975,GO:0006043,GO:0006044,GO:0006046,GO:0019262,GO:0042802;gene=nagB;Parent=GCA000144955_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_000866407.1,SO:0001217,UniParc:UPI0001DD9339,UniRef:UniRef100_UPI0001DD9339,UniRef:UniRef50_Q2G0K8,UniRef:UniRef90_Q2G0K8;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	612540	613172	.	+	.	ID=GCA000144955_00554_gene;locus_tag=GCA000144955_00554;gene=ulaD
contig_1	Pyrodigal	CDS	612540	613172	.	+	0	ID=GCA000144955_00554;Name=3-hexulose-6-phosphate synthase;locus_tag=GCA000144955_00554;product=3-hexulose-6-phosphate synthase;Dbxref=GO:0004590,GO:0006207,GO:0006730,GO:0019647,GO:0019854,GO:0033982,GO:0043801;gene=ulaD;Parent=GCA000144955_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0269,COG:G,RefSeq:WP_000422865.1,SO:0001217,UniParc:UPI0001DD933A,UniRef:UniRef100_A0A2K4AEG9,UniRef:UniRef50_P42405,UniRef:UniRef90_Q2G0K7;ec_number=4.1.2.43
contig_1	Pyrodigal	gene	613174	613722	.	+	.	ID=GCA000144955_00555_gene;locus_tag=GCA000144955_00555;gene=gutQ
contig_1	Pyrodigal	CDS	613174	613722	.	+	0	ID=GCA000144955_00555;Name=6-phospho-3-hexuloisomerase (PHI);locus_tag=GCA000144955_00555;product=6-phospho-3-hexuloisomerase (PHI);gene=gutQ;Parent=GCA000144955_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,KEGG:K08094,RefSeq:WP_000190300.1,SO:0001217,UniParc:UPI0001DD933B,UniRef:UniRef100_UPI0001DD933B,UniRef:UniRef50_A0A380G9B8,UniRef:UniRef90_A0A0U1MEX0;ec_number=5.3.1.27
contig_1	Pyrodigal	gene	613835	614482	.	+	.	ID=GCA000144955_00556_gene;locus_tag=GCA000144955_00556;gene=gph
contig_1	Pyrodigal	CDS	613835	614482	.	+	0	ID=GCA000144955_00556;Name=HAD family hydrolase;locus_tag=GCA000144955_00556;product=HAD family hydrolase;gene=gph;Parent=GCA000144955_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000667399.1,SO:0001217,UniParc:UPI0001DD94DE,UniRef:UniRef100_A0A6B1RH20,UniRef:UniRef50_A0A3M9EEU9,UniRef:UniRef90_A0A3M9EEU9
contig_1	Pyrodigal	gene	614981	616381	.	+	.	ID=GCA000144955_00557_gene;locus_tag=GCA000144955_00557;gene=proP
contig_1	Pyrodigal	CDS	614981	616381	.	+	0	ID=GCA000144955_00557;Name=Putative proline/betaine transporter;locus_tag=GCA000144955_00557;product=Putative proline/betaine transporter;Dbxref=GO:0005886,GO:0015293;gene=proP;Parent=GCA000144955_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03762,RefSeq:WP_000347072.1,SO:0001217,UniParc:UPI0001DD94DF,UniRef:UniRef100_UPI0001DD94DF,UniRef:UniRef50_Q4L3Q4,UniRef:UniRef90_Q5HIA2
contig_1	Pyrodigal	gene	616926	618302	.	+	.	ID=GCA000144955_00558_gene;locus_tag=GCA000144955_00558;gene=vraA
contig_1	Pyrodigal	CDS	616926	618302	.	+	0	ID=GCA000144955_00558;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000144955_00558;product=Putative long chain fatty acid-CoA ligase VraA;Dbxref=GO:0006631,GO:0031956;gene=vraA;Parent=GCA000144955_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001100823.1,SO:0001217,UniParc:UPI0001DD94E0,UniRef:UniRef100_UPI0001DD94E0,UniRef:UniRef50_Q5HIA1,UniRef:UniRef90_Q6GJ94;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	618304	619443	.	+	.	ID=GCA000144955_00559_gene;locus_tag=GCA000144955_00559;gene=vraB
contig_1	Pyrodigal	CDS	618304	619443	.	+	0	ID=GCA000144955_00559;Name=Putative acetyl-CoA C-acetyltransferase VraB;locus_tag=GCA000144955_00559;product=Putative acetyl-CoA C-acetyltransferase VraB;Dbxref=GO:0003988,GO:0006635,GO:0010124;gene=vraB;Parent=GCA000144955_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001070670.1,SO:0001217,UniParc:UPI0001DD94E1,UniRef:UniRef100_UPI0001DD94E1,UniRef:UniRef50_Q7A2W9,UniRef:UniRef90_Q7A2W9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	619418	619783	.	+	.	ID=GCA000144955_00560_gene;locus_tag=GCA000144955_00560;gene=vraC
contig_1	Pyrodigal	CDS	619418	619783	.	+	0	ID=GCA000144955_00560;Name=Protein VraC;locus_tag=GCA000144955_00560;product=Protein VraC;gene=vraC;Parent=GCA000144955_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165071.1,SO:0001217,UniParc:UPI0001DD94E2,UniRef:UniRef100_UPI0001DD94E2,UniRef:UniRef50_Q5HI99,UniRef:UniRef90_Q5HI99
contig_1	Pyrodigal	gene	619786	620064	.	+	.	ID=GCA000144955_00561_gene;locus_tag=GCA000144955_00561
contig_1	Pyrodigal	CDS	619786	620064	.	+	0	ID=GCA000144955_00561;Name=Phage protein;locus_tag=GCA000144955_00561;product=Phage protein;Parent=GCA000144955_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000671095.1,SO:0001217,UniParc:UPI0001DD94E3,UniRef:UniRef100_UPI0001DD94E3,UniRef:UniRef50_A0A7U7JSW5,UniRef:UniRef90_X5EG78
contig_1	Pyrodigal	gene	620255	620422	.	-	.	ID=GCA000144955_00562_gene;locus_tag=GCA000144955_00562;gene=vraX
contig_1	Pyrodigal	CDS	620255	620422	.	-	0	ID=GCA000144955_00562;Name=Protein VraX;locus_tag=GCA000144955_00562;product=Protein VraX;gene=vraX;Parent=GCA000144955_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000587958.1,SO:0001217,UniParc:UPI0000054816,UniRef:UniRef100_Q5HI97,UniRef:UniRef50_Q5HRG9,UniRef:UniRef90_Q5HI97
contig_1	Pyrodigal	gene	620956	621786	.	-	.	ID=GCA000144955_00563_gene;locus_tag=GCA000144955_00563;gene=pdxK
contig_1	Pyrodigal	CDS	620956	621786	.	-	0	ID=GCA000144955_00563;Name=Putative pyridoxine kinase;locus_tag=GCA000144955_00563;product=Putative pyridoxine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008478,GO:0008902,GO:0008972,GO:0009228,GO:0046872;gene=pdxK;Parent=GCA000144955_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_001185462.1,SO:0001217,UniParc:UPI0000054815,UniRef:UniRef100_Q5HI96,UniRef:UniRef50_Q8CTQ7,UniRef:UniRef90_Q5HI96;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	621970	622626	.	+	.	ID=GCA000144955_00564_gene;locus_tag=GCA000144955_00564;gene=ung
contig_1	Pyrodigal	CDS	621970	622626	.	+	0	ID=GCA000144955_00564;Name=uracil-DNA glycosylase;locus_tag=GCA000144955_00564;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0097510;gene=ung;Parent=GCA000144955_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_000455258.1,SO:0001217,UniParc:UPI00003B1469,UniRef:UniRef100_Q6GJ88,UniRef:UniRef50_Q2G0J7,UniRef:UniRef90_Q2G0J7;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	622627	623007	.	+	.	ID=GCA000144955_00565_gene;locus_tag=GCA000144955_00565;gene=ywdI
contig_1	Pyrodigal	CDS	622627	623007	.	+	0	ID=GCA000144955_00565;Name=YwdI family protein;locus_tag=GCA000144955_00565;product=YwdI family protein;gene=ywdI;Parent=GCA000144955_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248108.1,SO:0001217,UniParc:UPI0001DD94E4,UniRef:UniRef100_UPI0001DD94E4,UniRef:UniRef50_Q2G0J6,UniRef:UniRef90_Q2G0J6
contig_1	Pyrodigal	gene	623140	623508	.	+	.	ID=GCA000144955_00566_gene;locus_tag=GCA000144955_00566;gene=ygdD
contig_1	Pyrodigal	CDS	623140	623508	.	+	0	ID=GCA000144955_00566;Name=UPF0382 membrane protein SACOL0629;locus_tag=GCA000144955_00566;product=UPF0382 membrane protein SACOL0629;Dbxref=GO:0005886;gene=ygdD;Parent=GCA000144955_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_000765183.1,SO:0001217,UniParc:UPI0000054811,UniRef:UniRef100_Q2G0J5,UniRef:UniRef50_Q5HRG3,UniRef:UniRef90_Q2G0J5
contig_1	Pyrodigal	gene	623629	625113	.	+	.	ID=GCA000144955_00567_gene;locus_tag=GCA000144955_00567;gene=potE
contig_1	Pyrodigal	CDS	623629	625113	.	+	0	ID=GCA000144955_00567;Name=APC family permease;locus_tag=GCA000144955_00567;product=APC family permease;gene=potE;Parent=GCA000144955_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000412518.1,SO:0001217,UniParc:UPI00019F4DED,UniRef:UniRef100_A0A2X2JVD1,UniRef:UniRef50_Q2G0J4,UniRef:UniRef90_Q2G0J4
contig_1	Pyrodigal	gene	625254	625706	.	-	.	ID=GCA000144955_00568_gene;locus_tag=GCA000144955_00568;gene=yjjB
contig_1	Pyrodigal	CDS	625254	625706	.	-	0	ID=GCA000144955_00568;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000144955_00568;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000144955_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000498572.1,SO:0001217,UniParc:UPI000005480F,UniRef:UniRef100_Q2G0J3,UniRef:UniRef50_Q2G0J3,UniRef:UniRef90_Q2G0J3
contig_1	Pyrodigal	gene	625719	626483	.	-	.	ID=GCA000144955_00569_gene;locus_tag=GCA000144955_00569;gene=yjjP
contig_1	Pyrodigal	CDS	625719	626483	.	-	0	ID=GCA000144955_00569;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000144955_00569;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000144955_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_000354094.1,SO:0001217,UniParc:UPI0001DD94E5,UniRef:UniRef100_UPI0001DD94E5,UniRef:UniRef50_Q2G0J2,UniRef:UniRef90_Q2G0J2
contig_1	Infernal	gene	626724	626862	.	+	.	ID=GCA000144955_00570_gene;locus_tag=GCA000144955_00570;gene=rsaA
contig_1	Infernal	ncRNA	626724	626862	6.3e-17	+	.	ID=GCA000144955_00570;Name=RNA Staph. aureus A;locus_tag=GCA000144955_00570;gene=rsaA;product=RNA Staph. aureus A;Dbxref=RFAM:RF01816;Parent=GCA000144955_00570_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01816
contig_1	Pyrodigal	gene	627033	627785	.	-	.	ID=GCA000144955_00571_gene;locus_tag=GCA000144955_00571;gene=hemQ
contig_1	Pyrodigal	CDS	627033	627785	.	-	0	ID=GCA000144955_00571;Name=hydrogen peroxide-dependent heme synthase;locus_tag=GCA000144955_00571;product=hydrogen peroxide-dependent heme synthase;Dbxref=GO:0004601,GO:0006783,GO:0006785,GO:0020037,GO:0046872;gene=hemQ;Parent=GCA000144955_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3253,COG:HP,RefSeq:WP_000075712.1,SO:0001217,UniParc:UPI0001B3AE73,UniRef:UniRef100_A0A0S3DY11,UniRef:UniRef50_Q8Y5F1,UniRef:UniRef90_Q2G0J1;ec_number=1.3.98.5
contig_1	Pyrodigal	gene	627953	628939	.	+	.	ID=GCA000144955_00572_gene;locus_tag=GCA000144955_00572;gene=pta
contig_1	Pyrodigal	CDS	627953	628939	.	+	0	ID=GCA000144955_00572;Name=phosphate acetyltransferase;locus_tag=GCA000144955_00572;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006085,GO:0006086,GO:0008959;gene=pta;Parent=GCA000144955_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0280,RefSeq:WP_000774290.1,SO:0001217,UniParc:UPI0001DD94E6,UniRef:UniRef100_UPI0001DD94E6,UniRef:UniRef50_P39646,UniRef:UniRef90_Q6GJ80;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	628942	629778	.	+	.	ID=GCA000144955_00573_gene;locus_tag=GCA000144955_00573;gene=lipL
contig_1	Pyrodigal	CDS	628942	629778	.	+	0	ID=GCA000144955_00573;Name=Octanoyl-[GcvH]:protein N-octanoyltransferase;locus_tag=GCA000144955_00573;product=Octanoyl-[GcvH]:protein N-octanoyltransferase;Dbxref=GO:0009107,GO:0033819;gene=lipL;Parent=GCA000144955_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K16869,RefSeq:WP_000362356.1,SO:0001217,UniParc:UPI00000CAA59,UniRef:UniRef100_A0A0D1GX72,UniRef:UniRef50_Q2G0I9,UniRef:UniRef90_Q2G0I9;ec_number=2.3.1.204
contig_1	Pyrodigal	gene	630366	631286	.	+	.	ID=GCA000144955_00574_gene;locus_tag=GCA000144955_00574;gene=mvk
contig_1	Pyrodigal	CDS	630366	631286	.	+	0	ID=GCA000144955_00574;Name=mevalonate kinase;locus_tag=GCA000144955_00574;product=mevalonate kinase;Dbxref=GO:0004496,GO:0005524,GO:0005737,GO:0016126,GO:0019287;gene=mvk;Parent=GCA000144955_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00869,RefSeq:WP_000197036.1,SO:0001217,UniParc:UPI0001DD94E7,UniRef:UniRef100_UPI0001DD94E7,UniRef:UniRef50_A0A2K4AEE5,UniRef:UniRef90_A0A2K4AEE5;ec_number=2.7.1.36
contig_1	Pyrodigal	gene	631291	632274	.	+	.	ID=GCA000144955_00575_gene;locus_tag=GCA000144955_00575;gene=mvaD
contig_1	Pyrodigal	CDS	631291	632274	.	+	0	ID=GCA000144955_00575;Name=diphosphomevalonate decarboxylase;locus_tag=GCA000144955_00575;product=diphosphomevalonate decarboxylase;Dbxref=GO:0004163,GO:0005829,GO:0019287;gene=mvaD;Parent=GCA000144955_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3407,COG:I,KEGG:K01597,RefSeq:WP_000597320.1,SO:0001217,UniParc:UPI0001DD94E8,UniRef:UniRef100_UPI0001DD94E8,UniRef:UniRef50_Q9FD68,UniRef:UniRef90_Q9FD84;ec_number=4.1.1.33
contig_1	Pyrodigal	gene	632287	633363	.	+	.	ID=GCA000144955_00576_gene;locus_tag=GCA000144955_00576;gene=eRG12
contig_1	Pyrodigal	CDS	632287	633363	.	+	0	ID=GCA000144955_00576;Name=phosphomevalonate kinase;locus_tag=GCA000144955_00576;product=phosphomevalonate kinase;Dbxref=GO:0004631,GO:0016126,GO:0019287;gene=eRG12;Parent=GCA000144955_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00938,RefSeq:WP_000616885.1,SO:0001217,UniParc:UPI0000054808,UniRef:UniRef100_Q2G0I6,UniRef:UniRef50_B9DKS0,UniRef:UniRef90_A0A077VHR5;ec_number=2.7.4.2
contig_1	Pyrodigal	gene	633540	633881	.	+	.	ID=GCA000144955_00577_gene;locus_tag=GCA000144955_00577
contig_1	Pyrodigal	CDS	633540	633881	.	+	0	ID=GCA000144955_00577;Name=UPF0741 protein USA300HOU_0586;locus_tag=GCA000144955_00577;product=UPF0741 protein USA300HOU_0586;Parent=GCA000144955_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000798967.1,SO:0001217,UniParc:UPI00000D7681,UniRef:UniRef100_Q2G0I5,UniRef:UniRef50_Q2G0I5,UniRef:UniRef90_Q2G0I5
contig_1	Pyrodigal	gene	633933	635255	.	-	.	ID=GCA000144955_00578_gene;locus_tag=GCA000144955_00578;gene=merA
contig_1	Pyrodigal	CDS	633933	635255	.	-	0	ID=GCA000144955_00578;Name=hypothiocyanous acid reductase MerA;locus_tag=GCA000144955_00578;product=hypothiocyanous acid reductase MerA;Dbxref=GO:0016668,GO:0050660;gene=merA;Parent=GCA000144955_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K21739,RefSeq:WP_000860601.1,SO:0001217,UniParc:UPI0001DD94E9,UniRef:UniRef100_UPI0001DD94E9,UniRef:UniRef50_A0A266CGC0,UniRef:UniRef90_A0A266CGC0
contig_1	Pyrodigal	gene	635242	635682	.	-	.	ID=GCA000144955_00579_gene;locus_tag=GCA000144955_00579;gene=hypR
contig_1	Pyrodigal	CDS	635242	635682	.	-	0	ID=GCA000144955_00579;Name=redox-sensitive transcriptional regulator HypR;locus_tag=GCA000144955_00579;product=redox-sensitive transcriptional regulator HypR;gene=hypR;Parent=GCA000144955_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_001047237.1,SO:0001217,UniParc:UPI0001DD94EA,UniRef:UniRef100_A0A0U1MEZ3,UniRef:UniRef50_Q2G0I3,UniRef:UniRef90_Q2G0I3
contig_1	Pyrodigal	gene	636307	637704	.	+	.	ID=GCA000144955_00580_gene;locus_tag=GCA000144955_00580
contig_1	Pyrodigal	CDS	636307	637704	.	+	0	ID=GCA000144955_00580;Name=LXG domain-containing protein;locus_tag=GCA000144955_00580;product=LXG domain-containing protein;Parent=GCA000144955_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000020793.1,SO:0001217,UniParc:UPI0001DD94EB,UniRef:UniRef100_UPI0001DD94EB,UniRef:UniRef50_Q2G0I1,UniRef:UniRef90_A0A7U7JSX5
contig_1	Pyrodigal	gene	637708	638334	.	+	.	ID=GCA000144955_00581_gene;locus_tag=GCA000144955_00581
contig_1	Pyrodigal	CDS	637708	638334	.	+	0	ID=GCA000144955_00581;Name=DUF443 domain-containing protein;locus_tag=GCA000144955_00581;product=DUF443 domain-containing protein;Parent=GCA000144955_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882103.1,SO:0001217,UniParc:UPI0001DD94EC,UniRef:UniRef100_UPI0001DD94EC,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_UPI00208F4058
contig_1	Pyrodigal	gene	638449	639093	.	+	.	ID=GCA000144955_00582_gene;locus_tag=GCA000144955_00582
contig_1	Pyrodigal	CDS	638449	639093	.	+	0	ID=GCA000144955_00582;Name=DUF443 domain-containing protein;locus_tag=GCA000144955_00582;product=DUF443 domain-containing protein;Parent=GCA000144955_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0G9
contig_1	Pyrodigal	gene	639059	639304	.	+	.	ID=GCA000144955_00583_gene;locus_tag=GCA000144955_00583
contig_1	Pyrodigal	CDS	639059	639304	.	+	0	ID=GCA000144955_00583;Name=Phage protein;locus_tag=GCA000144955_00583;product=Phage protein;Parent=GCA000144955_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7I8NLS0,UniRef:UniRef90_A0A7I8NLS0
contig_1	Pyrodigal	gene	639328	639582	.	+	.	ID=GCA000144955_00584_gene;locus_tag=GCA000144955_00584
contig_1	Pyrodigal	CDS	639328	639582	.	+	0	ID=GCA000144955_00584;Name=Membrane spanning protein;locus_tag=GCA000144955_00584;product=Membrane spanning protein;Parent=GCA000144955_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7Z7W166,UniRef:UniRef90_A0A7Z7W166
contig_1	Pyrodigal	gene	639564	639950	.	+	.	ID=GCA000144955_00585_gene;locus_tag=GCA000144955_00585
contig_1	Pyrodigal	CDS	639564	639950	.	+	0	ID=GCA000144955_00585;Name=Membrane spanning protein;locus_tag=GCA000144955_00585;product=Membrane spanning protein;Parent=GCA000144955_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1X808,UniRef:UniRef90_A0A7Z7W0V1
contig_1	Pyrodigal	gene	640090	640719	.	+	.	ID=GCA000144955_00586_gene;locus_tag=GCA000144955_00586
contig_1	Pyrodigal	CDS	640090	640719	.	+	0	ID=GCA000144955_00586;Name=DUF443 domain-containing protein;locus_tag=GCA000144955_00586;product=DUF443 domain-containing protein;Parent=GCA000144955_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882192.1,SO:0001217,UniParc:UPI0001DD94EF,UniRef:UniRef100_UPI0001DD94EF,UniRef:UniRef50_A0A077UHM8,UniRef:UniRef90_A0A077UHM8
contig_1	Pyrodigal	gene	641169	641708	.	+	.	ID=GCA000144955_00587_gene;locus_tag=GCA000144955_00587
contig_1	Pyrodigal	CDS	641169	641708	.	+	0	ID=GCA000144955_00587;Name=Oxidoreductase;locus_tag=GCA000144955_00587;product=Oxidoreductase;Parent=GCA000144955_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380FDD1
contig_1	Pyrodigal	gene	641713	642105	.	+	.	ID=GCA000144955_00588_gene;locus_tag=GCA000144955_00588
contig_1	Pyrodigal	CDS	641713	642105	.	+	0	ID=GCA000144955_00588;Name=aldo/keto reductase;locus_tag=GCA000144955_00588;product=aldo/keto reductase;Parent=GCA000144955_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0021092CBA,UniRef:UniRef90_UPI0021092CBA
contig_1	Pyrodigal	gene	642315	642851	.	+	.	ID=GCA000144955_00589_gene;locus_tag=GCA000144955_00589;gene=wrbA
contig_1	Pyrodigal	CDS	642315	642851	.	+	0	ID=GCA000144955_00589;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000144955_00589;product=FMN-dependent NADPH-azoreductase;gene=wrbA;Parent=GCA000144955_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0655,RefSeq:WP_000633786.1,SO:0001217,UniParc:UPI0001DA2464,UniRef:UniRef100_A0A0D1JY42,UniRef:UniRef50_A0A7U7PXP0,UniRef:UniRef90_A0A7U7PXP0
contig_1	Pyrodigal	gene	643020	643496	.	+	.	ID=GCA000144955_00590_gene;locus_tag=GCA000144955_00590;gene=rimI
contig_1	Pyrodigal	CDS	643020	643496	.	+	0	ID=GCA000144955_00590;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00590;product=N-acetyltransferase domain-containing protein;gene=rimI;Parent=GCA000144955_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000477506.1,SO:0001217,UniParc:UPI0001DD94F0,UniRef:UniRef100_UPI0001DD94F0,UniRef:UniRef50_Q2G0G4,UniRef:UniRef90_Q2G0G4
contig_1	Pyrodigal	gene	643536	644831	.	+	.	ID=GCA000144955_00591_gene;locus_tag=GCA000144955_00591;gene=ydhJ
contig_1	Pyrodigal	CDS	643536	644831	.	+	0	ID=GCA000144955_00591;Name=HD domain-containing protein;locus_tag=GCA000144955_00591;product=HD domain-containing protein;gene=ydhJ;Parent=GCA000144955_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1078,COG:R,RefSeq:WP_000180234.1,SO:0001217,UniParc:UPI00000CAB03,UniRef:UniRef100_A0A0D1IB67,UniRef:UniRef50_P39651,UniRef:UniRef90_Q2G0G3
contig_1	Pyrodigal	gene	644874	645380	.	+	.	ID=GCA000144955_00592_gene;locus_tag=GCA000144955_00592
contig_1	Pyrodigal	CDS	644874	645380	.	+	0	ID=GCA000144955_00592;Name=Cytosolic protein;locus_tag=GCA000144955_00592;product=Cytosolic protein;Parent=GCA000144955_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9CCC,UniRef:UniRef100_A0A7Z7QX47,UniRef:UniRef50_A0A0U1MGP2,UniRef:UniRef90_A0A0U1MGP2
contig_1	Pyrodigal	gene	645879	646889	.	+	.	ID=GCA000144955_00593_gene;locus_tag=GCA000144955_00593;gene=adhP
contig_1	Pyrodigal	CDS	645879	646889	.	+	0	ID=GCA000144955_00593;Name=alcohol dehydrogenase AdhP;locus_tag=GCA000144955_00593;product=alcohol dehydrogenase AdhP;Dbxref=GO:0004022,GO:0008270;gene=adhP;Parent=GCA000144955_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1064,COG:G,KEGG:K13953,RefSeq:WP_001200748.1,SO:0001217,UniParc:UPI00000547EE,UniRef:UniRef100_Q2G0G1,UniRef:UniRef50_P20368,UniRef:UniRef90_Q2G0G1;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	647165	647581	.	+	.	ID=GCA000144955_00594_gene;locus_tag=GCA000144955_00594;gene=ywiB
contig_1	Pyrodigal	CDS	647165	647581	.	+	0	ID=GCA000144955_00594;Name=DUF1934 domain-containing protein;locus_tag=GCA000144955_00594;product=DUF1934 domain-containing protein;gene=ywiB;Parent=GCA000144955_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4506,COG:S,RefSeq:WP_000359086.1,SO:0001217,UniParc:UPI00006E396E,UniRef:UniRef100_W8U168,UniRef:UniRef50_A0A0D0SIW2,UniRef:UniRef90_A0A077V1W0
contig_1	Pyrodigal	gene	647578	649239	.	+	.	ID=GCA000144955_00595_gene;locus_tag=GCA000144955_00595;gene=argS
contig_1	Pyrodigal	CDS	647578	649239	.	+	0	ID=GCA000144955_00595;Name=arginine--tRNA ligase;locus_tag=GCA000144955_00595;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA000144955_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_001021153.1,SO:0001217,UniParc:UPI0001DD94F1,UniRef:UniRef100_UPI0001DD94F1,UniRef:UniRef50_P46906,UniRef:UniRef90_Q2G0F8;ec_number=6.1.1.19
contig_1	Pyrodigal	gene	649556	650191	.	+	.	ID=GCA000144955_00596_gene;locus_tag=GCA000144955_00596;gene=hP0602
contig_1	Pyrodigal	CDS	649556	650191	.	+	0	ID=GCA000144955_00596;Name=Endonuclease III;locus_tag=GCA000144955_00596;product=Endonuclease III;gene=hP0602;Parent=GCA000144955_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2231,COG:L,KEGG:K07457,RefSeq:WP_000901757.1,SO:0001217,UniParc:UPI0001DD94F2,UniRef:UniRef100_UPI0001DD94F2,UniRef:UniRef50_A0A0R2GA19,UniRef:UniRef90_A0A0U1MF38
contig_1	Pyrodigal	gene	650443	651330	.	+	.	ID=GCA000144955_00597_gene;locus_tag=GCA000144955_00597;gene=fepB
contig_1	Pyrodigal	CDS	650443	651330	.	+	0	ID=GCA000144955_00597;Name=ABC transporter substrate-binding protein;locus_tag=GCA000144955_00597;product=ABC transporter substrate-binding protein;gene=fepB;Parent=GCA000144955_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000749052.1,SO:0001217,UniParc:UPI0001DD94F3,UniRef:UniRef100_UPI0001DD94F3,UniRef:UniRef50_A0A380G1W9,UniRef:UniRef90_A0A6K1MU86
contig_1	Pyrodigal	gene	651445	652431	.	+	.	ID=GCA000144955_00598_gene;locus_tag=GCA000144955_00598;gene=fepD
contig_1	Pyrodigal	CDS	651445	652431	.	+	0	ID=GCA000144955_00598;Name=Transporter;locus_tag=GCA000144955_00598;product=Transporter;gene=fepD;Parent=GCA000144955_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniParc:UPI00019CD55E,UniRef:UniRef100_A0A166NJB2,UniRef:UniRef50_A0A1D4I031,UniRef:UniRef90_Q2G0F5
contig_1	Pyrodigal	gene	652486	653205	.	+	.	ID=GCA000144955_00599_gene;locus_tag=GCA000144955_00599;gene=yigB
contig_1	Pyrodigal	CDS	652486	653205	.	+	0	ID=GCA000144955_00599;Name=HAD family hydrolase;locus_tag=GCA000144955_00599;product=HAD family hydrolase;gene=yigB;Parent=GCA000144955_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_000365354.1,SO:0001217,UniParc:UPI00000547E7,UniRef:UniRef100_Q2G0F4,UniRef:UniRef50_A0A380G976,UniRef:UniRef90_A0A2K4AEL0
contig_1	Pyrodigal	gene	653189	653989	.	+	.	ID=GCA000144955_00600_gene;locus_tag=GCA000144955_00600;gene=menH
contig_1	Pyrodigal	CDS	653189	653989	.	+	0	ID=GCA000144955_00600;Name=3-oxoadipate enol-lactonase;locus_tag=GCA000144955_00600;product=3-oxoadipate enol-lactonase;gene=menH;Parent=GCA000144955_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000362964.1,SO:0001217,UniParc:UPI0001C0B937,UniRef:UniRef100_A0A8G2MA40,UniRef:UniRef50_A0A0Y9U704,UniRef:UniRef90_A0A0Y9U704
contig_1	Pyrodigal	gene	654125	654631	.	+	.	ID=GCA000144955_00601_gene;locus_tag=GCA000144955_00601
contig_1	Pyrodigal	CDS	654125	654631	.	+	0	ID=GCA000144955_00601;Name=SA0570 family protein;locus_tag=GCA000144955_00601;product=SA0570 family protein;Parent=GCA000144955_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735554.1,SO:0001217,UniParc:UPI00003B1483,UniRef:UniRef100_A0A7Z7W0V6,UniRef:UniRef50_Q49VF9,UniRef:UniRef90_A0A2K4AED1
contig_1	Pyrodigal	gene	654793	655509	.	+	.	ID=GCA000144955_00602_gene;locus_tag=GCA000144955_00602
contig_1	Pyrodigal	CDS	654793	655509	.	+	0	ID=GCA000144955_00602;Name=DUF1129 domain-containing protein;locus_tag=GCA000144955_00602;product=DUF1129 domain-containing protein;Parent=GCA000144955_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001222133.1,SO:0001217,UniParc:UPI00000D76FA,UniRef:UniRef100_Q2G0F1,UniRef:UniRef50_Q5HRC1,UniRef:UniRef90_A0A6H4BUY2
contig_1	Pyrodigal	gene	655678	656466	.	+	.	ID=GCA000144955_00603_gene;locus_tag=GCA000144955_00603;gene=menH
contig_1	Pyrodigal	CDS	655678	656466	.	+	0	ID=GCA000144955_00603;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000144955_00603;product=AB hydrolase-1 domain-containing protein;gene=menH;Parent=GCA000144955_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_001045420.1,SO:0001217,UniParc:UPI0001DD94F4,UniRef:UniRef100_A0A6B1RID8,UniRef:UniRef50_Q2G0F0,UniRef:UniRef90_Q2G0F0
contig_1	Pyrodigal	gene	656719	657093	.	-	.	ID=GCA000144955_00604_gene;locus_tag=GCA000144955_00604;gene=sarA
contig_1	Pyrodigal	CDS	656719	657093	.	-	0	ID=GCA000144955_00604;Name=global transcriptional regulator SarA;locus_tag=GCA000144955_00604;product=global transcriptional regulator SarA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0046872;gene=sarA;Parent=GCA000144955_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_001018677.1,SO:0001217,UniParc:UPI000003718E,UniRef:UniRef100_Q2G2U9,UniRef:UniRef50_Q2G2U9,UniRef:UniRef90_Q2G2U9
contig_1	Infernal	gene	657258	657453	.	-	.	ID=GCA000144955_00605_gene;locus_tag=GCA000144955_00605;gene=Teg49
contig_1	Infernal	ncRNA	657258	657453	3.2e-31	-	.	ID=GCA000144955_00605;Name=Teg49 sRNA;locus_tag=GCA000144955_00605;product=Teg49 sRNA;Dbxref=RFAM:RF02696;Parent=GCA000144955_00605_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02696
contig_1	Pyrodigal	gene	658041	658970	.	-	.	ID=GCA000144955_00606_gene;locus_tag=GCA000144955_00606;gene=ydcZ
contig_1	Pyrodigal	CDS	658041	658970	.	-	0	ID=GCA000144955_00606;Name=DMT family transporter;locus_tag=GCA000144955_00606;product=DMT family transporter;gene=ydcZ;Parent=GCA000144955_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3238,COG:S,KEGG:K09936,RefSeq:WP_044025867.1,SO:0001217,UniParc:UPI0005C4B017,UniRef:UniRef100_UPI0005C4B017,UniRef:UniRef50_Q2G2U7,UniRef:UniRef90_Q2G2U7
contig_1	Pyrodigal	gene	659165	659389	.	-	.	ID=GCA000144955_00607_gene;locus_tag=GCA000144955_00607
contig_1	Pyrodigal	CDS	659165	659389	.	-	0	ID=GCA000144955_00607;Name=DUF2922 domain-containing protein;locus_tag=GCA000144955_00607;product=DUF2922 domain-containing protein;Parent=GCA000144955_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169042.1,SO:0001217,UniParc:UPI00000547E0,UniRef:UniRef100_Q2G2V1,UniRef:UniRef50_Q2G2V1,UniRef:UniRef90_Q2G2V1
contig_1	Pyrodigal	gene	659406	659609	.	-	.	ID=GCA000144955_00608_gene;locus_tag=GCA000144955_00608
contig_1	Pyrodigal	CDS	659406	659609	.	-	0	ID=GCA000144955_00608;Name=DUF1659 domain-containing protein;locus_tag=GCA000144955_00608;product=DUF1659 domain-containing protein;Parent=GCA000144955_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036086.1,SO:0001217,UniParc:UPI00000D7765,UniRef:UniRef100_A0A2P8WWM5,UniRef:UniRef50_G5JM78,UniRef:UniRef90_A0A2P8WWM5
contig_1	Pyrodigal	gene	659768	660328	.	+	.	ID=GCA000144955_00609_gene;locus_tag=GCA000144955_00609;gene=xerD
contig_1	Pyrodigal	CDS	659768	660328	.	+	0	ID=GCA000144955_00609;Name=DNA integration/recombination/invertion protein;locus_tag=GCA000144955_00609;product=DNA integration/recombination/invertion protein;gene=xerD;Parent=GCA000144955_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_001044918.1,SO:0001217,UniParc:UPI0001DD96AA,UniRef:UniRef100_UPI0001DD96AA,UniRef:UniRef50_W8U156,UniRef:UniRef90_W8U156
contig_1	Pyrodigal	gene	660347	662749	.	+	.	ID=GCA000144955_00610_gene;locus_tag=GCA000144955_00610;gene=mnhA2
contig_1	Pyrodigal	CDS	660347	662749	.	+	0	ID=GCA000144955_00610;Name=Na+/H+ antiporter Mnh2 subunit A;locus_tag=GCA000144955_00610;product=Na+/H+ antiporter Mnh2 subunit A;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhA2;Parent=GCA000144955_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000060776,COG:COG2111,COG:P,RefSeq:WP_000060762.1,SO:0001217,UniParc:UPI0001DD96AB,UniRef:UniRef100_UPI0001DD96AB,UniRef:UniRef50_Q2G2U8,UniRef:UniRef90_Q2G2U8
contig_1	Pyrodigal	gene	662736	663161	.	+	.	ID=GCA000144955_00611_gene;locus_tag=GCA000144955_00611;gene=mnhB2
contig_1	Pyrodigal	CDS	662736	663161	.	+	0	ID=GCA000144955_00611;Name=Na+/H+ antiporter Mnh2 subunit B;locus_tag=GCA000144955_00611;product=Na+/H+ antiporter Mnh2 subunit B;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhB2;Parent=GCA000144955_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000661906,COG:COG2111,COG:P,RefSeq:WP_000661906.1,SO:0001217,UniParc:UPI00000547DC,UniRef:UniRef100_Q2G214,UniRef:UniRef50_Q2G214,UniRef:UniRef90_Q2G214
contig_1	Pyrodigal	gene	663158	663502	.	+	.	ID=GCA000144955_00612_gene;locus_tag=GCA000144955_00612;gene=mnhC2
contig_1	Pyrodigal	CDS	663158	663502	.	+	0	ID=GCA000144955_00612;Name=Na+/H+ antiporter Mnh2 subunit C;locus_tag=GCA000144955_00612;product=Na+/H+ antiporter Mnh2 subunit C;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhC2;Parent=GCA000144955_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001048985,COG:COG1006,COG:P,RefSeq:WP_001048985.1,SO:0001217,UniParc:UPI00000547DB,UniRef:UniRef100_Q2G213,UniRef:UniRef50_Q2G213,UniRef:UniRef90_Q2G213
contig_1	Pyrodigal	gene	663492	664988	.	+	.	ID=GCA000144955_00613_gene;locus_tag=GCA000144955_00613;gene=mnhD2
contig_1	Pyrodigal	CDS	663492	664988	.	+	0	ID=GCA000144955_00613;Name=Na+/H+ antiporter Mnh2 subunit D;locus_tag=GCA000144955_00613;product=Na+/H+ antiporter Mnh2 subunit D;Dbxref=GO:0005886,GO:0008137,GO:0015297,GO:0042773;gene=mnhD2;Parent=GCA000144955_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000950548,COG:COG0651,COG:CP,RefSeq:WP_000950560.1,SO:0001217,UniParc:UPI0001DD96AC,UniRef:UniRef100_UPI0001DD96AC,UniRef:UniRef50_Q0Q2J7,UniRef:UniRef90_Q0Q2J7
contig_1	Pyrodigal	gene	664989	665471	.	+	.	ID=GCA000144955_00614_gene;locus_tag=GCA000144955_00614;gene=mnhE2
contig_1	Pyrodigal	CDS	664989	665471	.	+	0	ID=GCA000144955_00614;Name=Na+/H+ antiporter Mnh2 subunit E;locus_tag=GCA000144955_00614;product=Na+/H+ antiporter Mnh2 subunit E;Dbxref=GO:0005886,GO:0008324,GO:0015297;gene=mnhE2;Parent=GCA000144955_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071973,COG:COG1863,COG:P,RefSeq:WP_001071971.1,SO:0001217,UniParc:UPI00000CAC4B,UniRef:UniRef100_Q99VY8,UniRef:UniRef50_Q2G210,UniRef:UniRef90_Q2G210
contig_1	Pyrodigal	gene	665468	665770	.	+	.	ID=GCA000144955_00615_gene;locus_tag=GCA000144955_00615;gene=mnhF2
contig_1	Pyrodigal	CDS	665468	665770	.	+	0	ID=GCA000144955_00615;Name=Na+/H+ antiporter Mnh2 subunit F;locus_tag=GCA000144955_00615;product=Na+/H+ antiporter Mnh2 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF2;Parent=GCA000144955_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000616642,COG:COG2212,COG:P,RefSeq:WP_000616642.1,SO:0001217,UniParc:UPI00000547D5,UniRef:UniRef100_P0C948,UniRef:UniRef50_P0C948,UniRef:UniRef90_P0C948
contig_1	Pyrodigal	gene	665745	666182	.	+	.	ID=GCA000144955_00616_gene;locus_tag=GCA000144955_00616;gene=mnhG2
contig_1	Pyrodigal	CDS	665745	666182	.	+	0	ID=GCA000144955_00616;Name=Na+/H+ antiporter Mnh2 subunit G;locus_tag=GCA000144955_00616;product=Na+/H+ antiporter Mnh2 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG2;Parent=GCA000144955_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566533,COG:COG1320,COG:P,RefSeq:WP_000406614.1,SO:0001217,UniParc:UPI0001DD96AD,UniRef:UniRef100_UPI0001DD96AD,UniRef:UniRef50_Q49VH5,UniRef:UniRef90_P0C947
contig_1	Pyrodigal	gene	666522	668564	.	+	.	ID=GCA000144955_00617_gene;locus_tag=GCA000144955_00617;gene=nhaP
contig_1	Pyrodigal	CDS	666522	668564	.	+	0	ID=GCA000144955_00617;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000144955_00617;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000144955_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,RefSeq:WP_000402172.1,SO:0001217,UniParc:UPI00000D9CD6,UniRef:UniRef100_A0A7Z7W222,UniRef:UniRef50_Q2G2E0,UniRef:UniRef90_Q2G2E0
contig_1	Infernal	gene	668759	669198	.	-	.	ID=GCA000144955_00618_gene;locus_tag=GCA000144955_00618;gene=rsaC
contig_1	Infernal	ncRNA	668759	669198	6.7e-65	-	.	ID=GCA000144955_00618;Name=RNA Staph. aureus C;locus_tag=GCA000144955_00618;gene=rsaC;product=RNA Staph. aureus C;Dbxref=RFAM:RF01818;Parent=GCA000144955_00618_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01818
contig_1	Pyrodigal	gene	669458	670387	.	-	.	ID=GCA000144955_00619_gene;locus_tag=GCA000144955_00619;gene=mntC
contig_1	Pyrodigal	CDS	669458	670387	.	-	0	ID=GCA000144955_00619;Name=manganese ABC transporter substrate-binding lipoprotein MntC;locus_tag=GCA000144955_00619;product=manganese ABC transporter substrate-binding lipoprotein MntC;Dbxref=GO:0015410;gene=mntC;Parent=GCA000144955_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0803,COG:P,RefSeq:WP_000737654.1,SO:0001217,UniParc:UPI000005228B,UniRef:UniRef100_A0A7Z7QX41,UniRef:UniRef50_S2YNP1,UniRef:UniRef90_A0A7U7PYB7;ec_number=7.2.2.5
contig_1	Pyrodigal	gene	670384	671220	.	-	.	ID=GCA000144955_00620_gene;locus_tag=GCA000144955_00620;gene=znuB
contig_1	Pyrodigal	CDS	670384	671220	.	-	0	ID=GCA000144955_00620;Name=Metal ABC transporter permease;locus_tag=GCA000144955_00620;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000144955_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_000889250.1,SO:0001217,UniParc:UPI0001B3B4CC,UniRef:UniRef100_A0A0S2J3X8,UniRef:UniRef50_S2XTU7,UniRef:UniRef90_A0A7U7EXG0
contig_1	Pyrodigal	gene	671214	671957	.	-	.	ID=GCA000144955_00621_gene;locus_tag=GCA000144955_00621;gene=znuC
contig_1	Pyrodigal	CDS	671214	671957	.	-	0	ID=GCA000144955_00621;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_00621;product=ABC transporter domain-containing protein;gene=znuC;Parent=GCA000144955_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_000894466.1,SO:0001217,UniParc:UPI0001DD96AE,UniRef:UniRef100_UPI0001DD96AE,UniRef:UniRef50_A0A240BUN7,UniRef:UniRef90_Q2G2L2
contig_1	Pyrodigal	gene	672079	672723	.	+	.	ID=GCA000144955_00622_gene;locus_tag=GCA000144955_00622;gene=mntR
contig_1	Pyrodigal	CDS	672079	672723	.	+	0	ID=GCA000144955_00622;Name=Manganese transport regulator;locus_tag=GCA000144955_00622;product=Manganese transport regulator;gene=mntR;Parent=GCA000144955_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1321,COG:K,RefSeq:WP_000954654.1,SO:0001217,UniParc:UPI00000547CF,UniRef:UniRef100_Q2G2L0,UniRef:UniRef50_Q5HRA0,UniRef:UniRef90_A0A2K4AED5
contig_1	Pyrodigal	gene	672803	673555	.	-	.	ID=GCA000144955_00623_gene;locus_tag=GCA000144955_00623
contig_1	Pyrodigal	CDS	672803	673555	.	-	0	ID=GCA000144955_00623;Name=M50 family metallopeptidase;locus_tag=GCA000144955_00623;product=M50 family metallopeptidase;Parent=GCA000144955_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001108540.1,SO:0001217,UniParc:UPI0001DD96AF,UniRef:UniRef100_UPI0001DD96AF,UniRef:UniRef50_Q2G2K9,UniRef:UniRef90_Q2G2K9
contig_1	Pyrodigal	gene	673791	674555	.	+	.	ID=GCA000144955_00624_gene;locus_tag=GCA000144955_00624;gene=tarA
contig_1	Pyrodigal	CDS	673791	674555	.	+	0	ID=GCA000144955_00624;Name=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;locus_tag=GCA000144955_00624;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;Dbxref=GO:0019350,GO:0047244,GO:0071555;gene=tarA;Parent=GCA000144955_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1922,COG:M,RefSeq:WP_000215393.1,SO:0001217,UniParc:UPI0001DD96B0,UniRef:UniRef100_UPI0001DD96B0,UniRef:UniRef50_Q2G2L3,UniRef:UniRef90_Q2G2L3;ec_number=2.4.1.187
contig_1	Pyrodigal	gene	674616	675410	.	-	.	ID=GCA000144955_00625_gene;locus_tag=GCA000144955_00625;gene=tagH
contig_1	Pyrodigal	CDS	674616	675410	.	-	0	ID=GCA000144955_00625;Name=teichoic acids export ABC transporter ATP-binding subunit TagH;locus_tag=GCA000144955_00625;product=teichoic acids export ABC transporter ATP-binding subunit TagH;Dbxref=GO:0005524,GO:0005886,GO:0015438,GO:0016020,GO:0016887,GO:0140359;gene=tagH;Parent=GCA000144955_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_001103232.1,SO:0001217,UniParc:UPI00000D9CD8,UniRef:UniRef100_Q2G2L1,UniRef:UniRef50_Q2G2L1,UniRef:UniRef90_Q2G2L1;ec_number=7.5.2.4
contig_1	Pyrodigal	gene	675757	676569	.	+	.	ID=GCA000144955_00626_gene;locus_tag=GCA000144955_00626;gene=tagG
contig_1	Pyrodigal	CDS	675757	676569	.	+	0	ID=GCA000144955_00626;Name=teichoic acids export ABC transporter permease subunit TagG;locus_tag=GCA000144955_00626;product=teichoic acids export ABC transporter permease subunit TagG;gene=tagG;Parent=GCA000144955_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001273058,BlastRules:WP_003227928,COG:COG1682,COG:G,KEGG:K09692,RefSeq:WP_001273059.1,SO:0001217,UniParc:UPI0001DD96B1,UniRef:UniRef100_UPI0001DD96B1,UniRef:UniRef50_A0A7U7EU92,UniRef:UniRef90_A0A7U7EU92
contig_1	Pyrodigal	gene	676668	677771	.	+	.	ID=GCA000144955_00627_gene;locus_tag=GCA000144955_00627;gene=tarB
contig_1	Pyrodigal	CDS	676668	677771	.	+	0	ID=GCA000144955_00627;Name=teichoic acid glycerol-phosphate primase TarB;locus_tag=GCA000144955_00627;product=teichoic acid glycerol-phosphate primase TarB;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarB;Parent=GCA000144955_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_001101611.1,SO:0001217,UniParc:UPI0002F28FEE,UniRef:UniRef100_UPI0002F28FEE,UniRef:UniRef50_Q2G2X4,UniRef:UniRef90_Q2G2X4;ec_number=2.7.8.44
contig_1	Pyrodigal	gene	677768	678829	.	+	.	ID=GCA000144955_00628_gene;locus_tag=GCA000144955_00628;gene=tagX
contig_1	Pyrodigal	CDS	677768	678829	.	+	0	ID=GCA000144955_00628;Name=Putative glycosyltransferase TagX;locus_tag=GCA000144955_00628;product=Putative glycosyltransferase TagX;Dbxref=GO:0008360,GO:0016757,GO:0019350,GO:0071555;gene=tagX;Parent=GCA000144955_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1216,COG:G,RefSeq:WP_001241197.1,SO:0001217,UniParc:UPI0001DD96B3,UniRef:UniRef100_UPI0001DD96B3,UniRef:UniRef50_O05154,UniRef:UniRef90_O05154;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	678892	679290	.	+	.	ID=GCA000144955_00629_gene;locus_tag=GCA000144955_00629;gene=tagD
contig_1	Pyrodigal	CDS	678892	679290	.	+	0	ID=GCA000144955_00629;Name=glycerol-3-phosphate cytidylyltransferase;locus_tag=GCA000144955_00629;product=glycerol-3-phosphate cytidylyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0046872,GO:0047348,GO:0071555;gene=tagD;Parent=GCA000144955_00629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0615,COG:M,RefSeq:WP_000832262.1,SO:0001217,UniParc:UPI0001DD96B4,UniRef:UniRef100_UPI0001DD96B4,UniRef:UniRef50_Q2G2X2,UniRef:UniRef90_Q2G2X2;ec_number=2.7.7.39
contig_1	Pyrodigal	gene	679407	680702	.	-	.	ID=GCA000144955_00630_gene;locus_tag=GCA000144955_00630;gene=pbp4
contig_1	Pyrodigal	CDS	679407	680702	.	-	0	ID=GCA000144955_00630;Name=penicillin-binding protein PBP4;locus_tag=GCA000144955_00630;product=penicillin-binding protein PBP4;gene=pbp4;Parent=GCA000144955_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,RefSeq:WP_000793052.1,SO:0001217,UniParc:UPI0001DD96B5,UniRef:UniRef100_UPI0001DD96B5,UniRef:UniRef50_A0A218M1Q9,UniRef:UniRef90_A0A218M1Q9
contig_1	Pyrodigal	gene	681123	682850	.	+	.	ID=GCA000144955_00631_gene;locus_tag=GCA000144955_00631;gene=mdlB
contig_1	Pyrodigal	CDS	681123	682850	.	+	0	ID=GCA000144955_00631;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_00631;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000144955_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000817954.1,SO:0001217,UniParc:UPI00000547C5,UniRef:UniRef100_Q2G2E5,UniRef:UniRef50_Q2G2E5,UniRef:UniRef90_Q2G2E5
contig_1	Pyrodigal	gene	683209	684438	.	+	.	ID=GCA000144955_00632_gene;locus_tag=GCA000144955_00632;gene=nupC
contig_1	Pyrodigal	CDS	683209	684438	.	+	0	ID=GCA000144955_00632;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000144955_00632;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000144955_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K16323,RefSeq:WP_000479279.1,SO:0001217,UniParc:UPI00000549B9,UniRef:UniRef100_Q2G2E4,UniRef:UniRef50_Q2G2E4,UniRef:UniRef90_Q2G2E4
contig_1	Infernal	gene	684588	684764	.	-	.	ID=GCA000144955_00633_gene;locus_tag=GCA000144955_00633;gene=rsaD
contig_1	Infernal	ncRNA	684588	684764	7.1e-29	-	.	ID=GCA000144955_00633;Name=RNA Staph. aureus D;locus_tag=GCA000144955_00633;gene=rsaD;product=RNA Staph. aureus D;Dbxref=RFAM:RF01819;Parent=GCA000144955_00633_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01819
contig_1	Pyrodigal	gene	684963	685796	.	+	.	ID=GCA000144955_00634_gene;locus_tag=GCA000144955_00634;gene=yitT
contig_1	Pyrodigal	CDS	684963	685796	.	+	0	ID=GCA000144955_00634;Name=DUF2179 domain-containing protein;locus_tag=GCA000144955_00634;product=DUF2179 domain-containing protein;gene=yitT;Parent=GCA000144955_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1284,COG:S,RefSeq:WP_001044662.1,SO:0001217,UniParc:UPI00003B1A72,UniRef:UniRef100_Q2G2E2,UniRef:UniRef50_Q2G2E2,UniRef:UniRef90_Q2G2E2
contig_1	Pyrodigal	gene	686078	686875	.	+	.	ID=GCA000144955_00635_gene;locus_tag=GCA000144955_00635;gene=fepC
contig_1	Pyrodigal	CDS	686078	686875	.	+	0	ID=GCA000144955_00635;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_00635;product=ABC transporter ATP-binding protein;gene=fepC;Parent=GCA000144955_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_001080807.1,SO:0001217,UniParc:UPI0001DD96B6,UniRef:UniRef100_UPI0001DD96B6,UniRef:UniRef50_R2PWZ5,UniRef:UniRef90_A0A2K4AE83
contig_1	Pyrodigal	gene	686911	687915	.	+	.	ID=GCA000144955_00636_gene;locus_tag=GCA000144955_00636;gene=fepD
contig_1	Pyrodigal	CDS	686911	687915	.	+	0	ID=GCA000144955_00636;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000144955_00636;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000144955_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000184743.1,SO:0001217,UniParc:UPI0001DD96B7,UniRef:UniRef100_UPI0001DD96B7,UniRef:UniRef50_B9E9G3,UniRef:UniRef90_A0A7U7JT50
contig_1	Pyrodigal	gene	687912	688928	.	+	.	ID=GCA000144955_00637_gene;locus_tag=GCA000144955_00637;gene=fepD
contig_1	Pyrodigal	CDS	687912	688928	.	+	0	ID=GCA000144955_00637;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000144955_00637;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000144955_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000625891.1,SO:0001217,UniParc:UPI0001DD96B8,UniRef:UniRef100_UPI0001DD96B8,UniRef:UniRef50_B9DKA5,UniRef:UniRef90_A0A0U1MFB2
contig_1	Pyrodigal	gene	689161	690129	.	+	.	ID=GCA000144955_00638_gene;locus_tag=GCA000144955_00638;gene=dhaK
contig_1	Pyrodigal	CDS	689161	690129	.	+	0	ID=GCA000144955_00638;Name=dihydroxyacetone kinase subunit DhaK;locus_tag=GCA000144955_00638;product=dihydroxyacetone kinase subunit DhaK;Dbxref=GO:0004371,GO:0006071;gene=dhaK;Parent=GCA000144955_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000976258.1,SO:0001217,UniParc:UPI000317790A,UniRef:UniRef100_UPI000317790A,UniRef:UniRef50_A0A0D6XPW7,UniRef:UniRef90_A0A380E3E7;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	690171	690755	.	+	.	ID=GCA000144955_00639_gene;locus_tag=GCA000144955_00639;gene=dhaL
contig_1	Pyrodigal	CDS	690171	690755	.	+	0	ID=GCA000144955_00639;Name=dihydroxyacetone kinase subunit DhaL;locus_tag=GCA000144955_00639;product=dihydroxyacetone kinase subunit DhaL;Dbxref=GO:0006071,GO:0047324;gene=dhaL;Parent=GCA000144955_00639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000867196.1,SO:0001217,UniParc:UPI0001DD96BA,UniRef:UniRef100_A0A6B1RPQ7,UniRef:UniRef50_A0A380G5G0,UniRef:UniRef90_A0AAE8PB82;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	690748	691110	.	+	.	ID=GCA000144955_00640_gene;locus_tag=GCA000144955_00640;gene=dhaM
contig_1	Pyrodigal	CDS	690748	691110	.	+	0	ID=GCA000144955_00640;Name=phosphoenolpyruvate--glycerone phosphotransferase;locus_tag=GCA000144955_00640;product=phosphoenolpyruvate--glycerone phosphotransferase;gene=dhaM;Parent=GCA000144955_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3412,COG:T,RefSeq:WP_000161319.1,SO:0001217,UniParc:UPI0001DD96BB,UniRef:UniRef100_A0A6B1RHX1,UniRef:UniRef50_A0A2T4MIK7,UniRef:UniRef90_A0A0U1MGK2
contig_1	Pyrodigal	gene	691226	691723	.	+	.	ID=GCA000144955_00641_gene;locus_tag=GCA000144955_00641
contig_1	Pyrodigal	CDS	691226	691723	.	+	0	ID=GCA000144955_00641;Name=Immunity protein 30 domain-containing protein;locus_tag=GCA000144955_00641;product=Immunity protein 30 domain-containing protein;Parent=GCA000144955_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001164085.1,SO:0001217,UniParc:UPI00000549AF,UniRef:UniRef100_Q2G0E7,UniRef:UniRef50_S2YNQ8,UniRef:UniRef90_A0A9X5XNP2
contig_1	Pyrodigal	gene	692180	693247	.	+	.	ID=GCA000144955_00642_gene;locus_tag=GCA000144955_00642;gene=ykvI
contig_1	Pyrodigal	CDS	692180	693247	.	+	0	ID=GCA000144955_00642;Name=Branched-chain amino acid transport system II carrier protein;locus_tag=GCA000144955_00642;product=Branched-chain amino acid transport system II carrier protein;gene=ykvI;Parent=GCA000144955_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_000980139.1,SO:0001217,UniParc:UPI0001C0B971,UniRef:UniRef100_A0A0D1JQ87,UniRef:UniRef50_K9AMJ6,UniRef:UniRef90_Q2G0E6
contig_1	Pyrodigal	gene	693398	694441	.	+	.	ID=GCA000144955_00643_gene;locus_tag=GCA000144955_00643;gene=aes
contig_1	Pyrodigal	CDS	693398	694441	.	+	0	ID=GCA000144955_00643;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000144955_00643;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000144955_00643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001030773.1,SO:0001217,UniParc:UPI0001DD96BC,UniRef:UniRef100_UPI0001DD96BC,UniRef:UniRef50_A0A240BV45,UniRef:UniRef90_Q2G0E5
contig_1	Pyrodigal	gene	694770	695198	.	+	.	ID=GCA000144955_00644_gene;locus_tag=GCA000144955_00644
contig_1	Pyrodigal	CDS	694770	695198	.	+	0	ID=GCA000144955_00644;Name=Cytosolic protein;locus_tag=GCA000144955_00644;product=Cytosolic protein;Parent=GCA000144955_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000198500.1,SO:0001217,UniParc:UPI0001DD96BD,UniRef:UniRef100_A0AAW9XFH2,UniRef:UniRef50_A0A7U7JT75,UniRef:UniRef90_Q2G0E3
contig_1	Pyrodigal	gene	695405	695911	.	-	.	ID=GCA000144955_00645_gene;locus_tag=GCA000144955_00645;gene=rimL
contig_1	Pyrodigal	CDS	695405	695911	.	-	0	ID=GCA000144955_00645;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00645;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000144955_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000940129.1,SO:0001217,UniParc:UPI00000D7737,UniRef:UniRef100_A0A7Z7W0X0,UniRef:UniRef50_Q2G0E2,UniRef:UniRef90_Q2G0E2
contig_1	Pyrodigal	gene	696024	696947	.	+	.	ID=GCA000144955_00646_gene;locus_tag=GCA000144955_00646;gene=graX
contig_1	Pyrodigal	CDS	696024	696947	.	+	0	ID=GCA000144955_00646;Name=auxiliary protein GraX/ApsX;locus_tag=GCA000144955_00646;product=auxiliary protein GraX/ApsX;gene=graX;Parent=GCA000144955_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000802946,BlastRules:WP_001832033,COG:COG0451,COG:M,RefSeq:WP_000802957.1,SO:0001217,UniParc:UPI00005FE2FE,UniRef:UniRef100_A0A346T8L4,UniRef:UniRef50_Q2G0E1,UniRef:UniRef90_Q2G0E1
contig_1	Pyrodigal	gene	696963	697637	.	+	.	ID=GCA000144955_00647_gene;locus_tag=GCA000144955_00647;gene=graR
contig_1	Pyrodigal	CDS	696963	697637	.	+	0	ID=GCA000144955_00647;Name=response regulator transcription factor GraR/ApsR;locus_tag=GCA000144955_00647;product=response regulator transcription factor GraR/ApsR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993,GO:0046677;gene=graR;Parent=GCA000144955_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001166505,BlastRules:WP_001832046,COG:COG0745,COG:TK,KEGG:K19078,RefSeq:WP_001166496.1,SO:0001217,UniParc:UPI00005FE2FF,UniRef:UniRef100_Q2YSS2,UniRef:UniRef50_Q2G0E0,UniRef:UniRef90_Q2G0E0
contig_1	Pyrodigal	gene	697630	698670	.	+	.	ID=GCA000144955_00648_gene;locus_tag=GCA000144955_00648;gene=graS
contig_1	Pyrodigal	CDS	697630	698670	.	+	0	ID=GCA000144955_00648;Name=histidine kinase GraS/ApsS;locus_tag=GCA000144955_00648;product=histidine kinase GraS/ApsS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036,GO:0046677;gene=graS;Parent=GCA000144955_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001061252,BlastRules:WP_002468453,COG:COG0642,COG:T,RefSeq:WP_001061246.1,SO:0001217,UniParc:UPI0001DD9848,UniRef:UniRef100_UPI0001DD9848,UniRef:UniRef50_Q8NXR5,UniRef:UniRef90_Q8NXR5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	698814	699575	.	+	.	ID=GCA000144955_00649_gene;locus_tag=GCA000144955_00649;gene=vraF
contig_1	Pyrodigal	CDS	698814	699575	.	+	0	ID=GCA000144955_00649;Name=ABC transporter ATP-binding protein VraF;locus_tag=GCA000144955_00649;product=ABC transporter ATP-binding protein VraF;gene=vraF;Parent=GCA000144955_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001637630,BlastRules:WP_020363729,COG:COG1136,COG:M,KEGG:K19079,RefSeq:WP_000985998.1,SO:0001217,UniParc:UPI0001DD9849,UniRef:UniRef100_UPI0001DD9849,UniRef:UniRef50_O34697,UniRef:UniRef90_Q2G0D8
contig_1	Pyrodigal	gene	699565	701454	.	+	.	ID=GCA000144955_00650_gene;locus_tag=GCA000144955_00650;gene=vraG
contig_1	Pyrodigal	CDS	699565	701454	.	+	0	ID=GCA000144955_00650;Name=ABC transporter permease VraG;locus_tag=GCA000144955_00650;product=ABC transporter permease VraG;gene=vraG;Parent=GCA000144955_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143623,BlastRules:WP_002457535,KEGG:K19080,RefSeq:WP_000143605.1,SO:0001217,UniParc:UPI0001DD984A,UniRef:UniRef100_UPI0001DD984A,UniRef:UniRef50_Q4L484,UniRef:UniRef90_A0A0H3JK48
contig_1	Pyrodigal	gene	702179	702796	.	+	.	ID=GCA000144955_00651_gene;locus_tag=GCA000144955_00651;gene=ykaA
contig_1	Pyrodigal	CDS	702179	702796	.	+	0	ID=GCA000144955_00651;Name=DUF47 domain-containing protein;locus_tag=GCA000144955_00651;product=DUF47 domain-containing protein;gene=ykaA;Parent=GCA000144955_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1392,COG:P,RefSeq:WP_000491755.1,SO:0001217,UniParc:UPI00000549A3,UniRef:UniRef100_Q2G0D6,UniRef:UniRef50_A0A919WW74,UniRef:UniRef90_Q2G0D6
contig_1	Pyrodigal	gene	702812	703819	.	+	.	ID=GCA000144955_00652_gene;locus_tag=GCA000144955_00652;gene=pitA
contig_1	Pyrodigal	CDS	702812	703819	.	+	0	ID=GCA000144955_00652;Name=Inorganic phosphate transporter;locus_tag=GCA000144955_00652;product=Inorganic phosphate transporter;gene=pitA;Parent=GCA000144955_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,KEGG:K03306,RefSeq:WP_000120368.1,SO:0001217,UniParc:UPI00000549A2,UniRef:UniRef100_Q2G0D5,UniRef:UniRef50_Q2G0D5,UniRef:UniRef90_Q2G0D5
contig_1	Pyrodigal	gene	704406	705203	.	-	.	ID=GCA000144955_00653_gene;locus_tag=GCA000144955_00653
contig_1	Pyrodigal	CDS	704406	705203	.	-	0	ID=GCA000144955_00653;Name=putative autolysin SsaALP;locus_tag=GCA000144955_00653;product=putative autolysin SsaALP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000144955_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000731644.1,SO:0001217,UniParc:UPI000005226B,UniRef:UniRef100_Q2G0D4,UniRef:UniRef50_Q2G0D4,UniRef:UniRef90_Q2G0D4;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	705564	706208	.	+	.	ID=GCA000144955_00654_gene;locus_tag=GCA000144955_00654;gene=ybhL
contig_1	Pyrodigal	CDS	705564	706208	.	+	0	ID=GCA000144955_00654;Name=Transporter;locus_tag=GCA000144955_00654;product=Transporter;gene=ybhL;Parent=GCA000144955_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_000081602.1,SO:0001217,UniParc:UPI00000D76B5,UniRef:UniRef100_Q2G0D3,UniRef:UniRef50_Q2G0D3,UniRef:UniRef90_Q2G0D3
contig_1	Pyrodigal	gene	706903	709053	.	+	.	ID=GCA000144955_00655_gene;locus_tag=GCA000144955_00655;gene=araC
contig_1	Pyrodigal	CDS	706903	709053	.	+	0	ID=GCA000144955_00655;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000144955_00655;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000144955_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_001129760.1,SO:0001217,UniParc:UPI0001DD984B,UniRef:UniRef100_UPI0001DD984B,UniRef:UniRef50_Q2G0D2,UniRef:UniRef90_Q2G0D2
contig_1	Pyrodigal	gene	709133	709558	.	+	.	ID=GCA000144955_00656_gene;locus_tag=GCA000144955_00656;gene=sarX
contig_1	Pyrodigal	CDS	709133	709558	.	+	0	ID=GCA000144955_00656;Name=HTH-type transcriptional regulator SarX;locus_tag=GCA000144955_00656;product=HTH-type transcriptional regulator SarX;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarX;Parent=GCA000144955_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B14AA,UniRef:UniRef100_A0A0E1X7S0,UniRef:UniRef50_Q2G0D1,UniRef:UniRef90_Q2G0D1
contig_1	Pyrodigal	gene	709748	710464	.	+	.	ID=GCA000144955_00657_gene;locus_tag=GCA000144955_00657;gene=tACO1
contig_1	Pyrodigal	CDS	709748	710464	.	+	0	ID=GCA000144955_00657;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000144955_00657;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA000144955_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_000532966.1,SO:0001217,UniParc:UPI0000054971,UniRef:UniRef100_Q2G0D0,UniRef:UniRef50_P0A8A2,UniRef:UniRef90_Q2G0D0
contig_1	Pyrodigal	gene	710464	710937	.	+	.	ID=GCA000144955_00658_gene;locus_tag=GCA000144955_00658;gene=cFF1
contig_1	Pyrodigal	CDS	710464	710937	.	+	0	ID=GCA000144955_00658;Name=DUF985 domain-containing protein;locus_tag=GCA000144955_00658;product=DUF985 domain-containing protein;gene=cFF1;Parent=GCA000144955_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3542,COG:R,KEGG:K09705,RefSeq:WP_000833486.1,SO:0001217,UniParc:UPI00006E3975,UniRef:UniRef100_A0A0D1HW72,UniRef:UniRef50_Q2G0C9,UniRef:UniRef90_Q2G0C9
contig_1	Pyrodigal	gene	711290	711934	.	+	.	ID=GCA000144955_00659_gene;locus_tag=GCA000144955_00659
contig_1	Pyrodigal	CDS	711290	711934	.	+	0	ID=GCA000144955_00659;Name=DUF402 domain-containing protein;locus_tag=GCA000144955_00659;product=DUF402 domain-containing protein;Parent=GCA000144955_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2306,COG:R,KEGG:K09145,RefSeq:WP_000865622.1,SO:0001217,UniParc:UPI00005FE307,UniRef:UniRef100_A0AA40JLK0,UniRef:UniRef50_Q49VL4,UniRef:UniRef90_A0A7U7JT79
contig_1	Pyrodigal	gene	712050	712916	.	+	.	ID=GCA000144955_00660_gene;locus_tag=GCA000144955_00660;gene=lysR
contig_1	Pyrodigal	CDS	712050	712916	.	+	0	ID=GCA000144955_00660;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000144955_00660;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000144955_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000687412.1,SO:0001217,UniParc:UPI00000D9CE5,UniRef:UniRef100_A0A0D1IHL7,UniRef:UniRef50_Q2G0C6,UniRef:UniRef90_Q2G0C6
contig_1	Pyrodigal	gene	713396	714616	.	+	.	ID=GCA000144955_00661_gene;locus_tag=GCA000144955_00661
contig_1	Pyrodigal	CDS	713396	714616	.	+	0	ID=GCA000144955_00661;Name=Major facilitator superfamily protein superfamily;locus_tag=GCA000144955_00661;product=Major facilitator superfamily protein superfamily;Parent=GCA000144955_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03291,RefSeq:WP_000367068.1,SO:0001217,UniParc:UPI0001DD984D,UniRef:UniRef100_UPI0001DD984D,UniRef:UniRef50_Q2G0C4,UniRef:UniRef90_Q2G0C4
contig_1	Pyrodigal	gene	714613	715101	.	+	.	ID=GCA000144955_00662_gene;locus_tag=GCA000144955_00662
contig_1	Pyrodigal	CDS	714613	715101	.	+	0	ID=GCA000144955_00662;Name=DUF456 domain-containing protein;locus_tag=GCA000144955_00662;product=DUF456 domain-containing protein;Parent=GCA000144955_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09793,RefSeq:WP_000152587.1,SO:0001217,UniParc:UPI0001DD984E,UniRef:UniRef100_UPI0001DD984E,UniRef:UniRef50_Q49VL7,UniRef:UniRef90_A0A380E3B9
contig_1	Pyrodigal	gene	715200	715889	.	-	.	ID=GCA000144955_00663_gene;locus_tag=GCA000144955_00663
contig_1	Pyrodigal	CDS	715200	715889	.	-	0	ID=GCA000144955_00663;Name=DUF1129 domain-containing protein;locus_tag=GCA000144955_00663;product=DUF1129 domain-containing protein;Parent=GCA000144955_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4858,COG:S,RefSeq:WP_000842865.1,SO:0001217,UniParc:UPI00003B14C4,UniRef:UniRef100_A0A7Z7QXB8,UniRef:UniRef50_Q2G0C2,UniRef:UniRef90_Q2G0C2
contig_1	Pyrodigal	gene	716016	716459	.	+	.	ID=GCA000144955_00664_gene;locus_tag=GCA000144955_00664
contig_1	Pyrodigal	CDS	716016	716459	.	+	0	ID=GCA000144955_00664;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00664;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001202306.1,SO:0001217,UniParc:UPI0001DD984F,UniRef:UniRef100_UPI0001DD984F,UniRef:UniRef50_Q2G0C1,UniRef:UniRef90_Q2G0C1
contig_1	Pyrodigal	gene	716527	716928	.	+	.	ID=GCA000144955_00665_gene;locus_tag=GCA000144955_00665
contig_1	Pyrodigal	CDS	716527	716928	.	+	0	ID=GCA000144955_00665;Name=SA0632 family lipoprotein;locus_tag=GCA000144955_00665;product=SA0632 family lipoprotein;Parent=GCA000144955_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733446.1,SO:0001217,UniParc:UPI0001DD9850,UniRef:UniRef100_UPI0001DD9850,UniRef:UniRef50_G5JIS8,UniRef:UniRef90_A0A6A9GRM5
contig_1	Pyrodigal	gene	717066	717365	.	+	.	ID=GCA000144955_00666_gene;locus_tag=GCA000144955_00666
contig_1	Pyrodigal	CDS	717066	717365	.	+	0	ID=GCA000144955_00666;Name=Phage protein;locus_tag=GCA000144955_00666;product=Phage protein;Parent=GCA000144955_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000545116.1,SO:0001217,UniParc:UPI00003B14C7,UniRef:UniRef100_A0A7Z7QXU3,UniRef:UniRef50_A0A240BWH3,UniRef:UniRef90_Q2G0B9
contig_1	Pyrodigal	gene	717445	717987	.	+	.	ID=GCA000144955_00667_gene;locus_tag=GCA000144955_00667;gene=rimL
contig_1	Pyrodigal	CDS	717445	717987	.	+	0	ID=GCA000144955_00667;Name=Acetyltransferase%2C GNAT family;locus_tag=GCA000144955_00667;product=Acetyltransferase%2C GNAT family;gene=rimL;Parent=GCA000144955_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000638613.1,SO:0001217,UniParc:UPI0000054900,UniRef:UniRef100_A0AA43V2W6,UniRef:UniRef50_A0A0U1MFJ7,UniRef:UniRef90_A0A0U1MFJ7
contig_1	Pyrodigal	gene	718083	718649	.	-	.	ID=GCA000144955_00668_gene;locus_tag=GCA000144955_00668;gene=ppnN
contig_1	Pyrodigal	CDS	718083	718649	.	-	0	ID=GCA000144955_00668;Name=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;locus_tag=GCA000144955_00668;product=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;gene=ppnN;Parent=GCA000144955_00668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1611,COG:F,KEGG:K22522,RefSeq:WP_000820892.1,SO:0001217,UniParc:UPI00000548EB,UniRef:UniRef100_Q2G0B7,UniRef:UniRef50_A0A9X5XNB6,UniRef:UniRef90_A0A0U1MFK8;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	718651	719109	.	-	.	ID=GCA000144955_00669_gene;locus_tag=GCA000144955_00669;gene=yaiI
contig_1	Pyrodigal	CDS	718651	719109	.	-	0	ID=GCA000144955_00669;Name=YaiI/YqxD family protein;locus_tag=GCA000144955_00669;product=YaiI/YqxD family protein;gene=yaiI;Parent=GCA000144955_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1671,COG:S,KEGG:K09768,RefSeq:WP_000148822.1,SO:0001217,UniParc:UPI00005FE30C,UniRef:UniRef100_Q2YSQ0,UniRef:UniRef50_Q2G0B6,UniRef:UniRef90_Q2G0B6
contig_1	Pyrodigal	gene	719112	719795	.	-	.	ID=GCA000144955_00670_gene;locus_tag=GCA000144955_00670
contig_1	Pyrodigal	CDS	719112	719795	.	-	0	ID=GCA000144955_00670;Name=hypothetical protein;locus_tag=GCA000144955_00670;product=hypothetical protein;Parent=GCA000144955_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000358507.1,SO:0001217,UniParc:UPI0001DD9851,UniRef:UniRef100_UPI0001DD9851,UniRef:UniRef50_A0A0E1X7T8,UniRef:UniRef90_A0A0E1X7T8
contig_1	Pyrodigal	gene	719967	720842	.	-	.	ID=GCA000144955_00671_gene;locus_tag=GCA000144955_00671;gene=uppP
contig_1	Pyrodigal	CDS	719967	720842	.	-	0	ID=GCA000144955_00671;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000144955_00671;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555;gene=uppP;Parent=GCA000144955_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1968,COG:I,RefSeq:WP_000469894.1,SO:0001217,UniParc:UPI0000137CF2,UniRef:UniRef100_P67390,UniRef:UniRef50_P94507,UniRef:UniRef90_Q9KIN5;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	721061	722692	.	+	.	ID=GCA000144955_00672_gene;locus_tag=GCA000144955_00672;gene=cydD
contig_1	Pyrodigal	CDS	721061	722692	.	+	0	ID=GCA000144955_00672;Name=ABC transporter ATP-binding protein/permease;locus_tag=GCA000144955_00672;product=ABC transporter ATP-binding protein/permease;gene=cydD;Parent=GCA000144955_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_000737152.1,SO:0001217,UniParc:UPI0001DD9852,UniRef:UniRef100_UPI0001DD9852,UniRef:UniRef50_A0A0H2VEV6,UniRef:UniRef90_Q2G0B3
contig_1	Pyrodigal	gene	722689	724362	.	+	.	ID=GCA000144955_00673_gene;locus_tag=GCA000144955_00673;gene=cydC
contig_1	Pyrodigal	CDS	722689	724362	.	+	0	ID=GCA000144955_00673;Name=Amino acid ABC transporter ATP-binding/permease protein;locus_tag=GCA000144955_00673;product=Amino acid ABC transporter ATP-binding/permease protein;gene=cydC;Parent=GCA000144955_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_000857609.1,SO:0001217,UniParc:UPI0001DD9853,UniRef:UniRef100_UPI0001DD9853,UniRef:UniRef50_A0A4U9TIQ0,UniRef:UniRef90_Q2G0B2
contig_1	Pyrodigal	gene	724489	724932	.	-	.	ID=GCA000144955_00674_gene;locus_tag=GCA000144955_00674;gene=mgrA
contig_1	Pyrodigal	CDS	724489	724932	.	-	0	ID=GCA000144955_00674;Name=HTH-type transcriptional regulator MgrA;locus_tag=GCA000144955_00674;product=HTH-type transcriptional regulator MgrA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=mgrA;Parent=GCA000144955_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001283444,COG:COG1846,COG:K,KEGG:K18906,RefSeq:WP_001283444.1,SO:0001217,UniParc:UPI00000548AE,UniRef:UniRef100_Q2G0B1,UniRef:UniRef50_Q2G0B1,UniRef:UniRef90_Q2G0B1
contig_1	Pyrodigal	gene	725159	726085	.	+	.	ID=GCA000144955_00675_gene;locus_tag=GCA000144955_00675;gene=yejR
contig_1	Pyrodigal	CDS	725159	726085	.	+	0	ID=GCA000144955_00675;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000144955_00675;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000144955_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000794416.1,SO:0001217,UniParc:UPI0001DA1FBD,UniRef:UniRef100_A0A346T8P3,UniRef:UniRef50_G5JL55,UniRef:UniRef90_Q2G0B0
contig_1	Pyrodigal	gene	726188	727096	.	+	.	ID=GCA000144955_00676_gene;locus_tag=GCA000144955_00676;gene=ydhF
contig_1	Pyrodigal	CDS	726188	727096	.	+	0	ID=GCA000144955_00676;Name=NADP-dependent oxidoreductase domain-containing protein;locus_tag=GCA000144955_00676;product=NADP-dependent oxidoreductase domain-containing protein;gene=ydhF;Parent=GCA000144955_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4989,COG:R,RefSeq:WP_000435104.1,SO:0001217,UniParc:UPI00019CD7C0,UniRef:UniRef100_A0A7Z7QXV1,UniRef:UniRef50_Q2G0A9,UniRef:UniRef90_Q2G0A9
contig_1	Pyrodigal	gene	727131	727418	.	+	.	ID=GCA000144955_00677_gene;locus_tag=GCA000144955_00677
contig_1	Pyrodigal	CDS	727131	727418	.	+	0	ID=GCA000144955_00677;Name=Membrane protein;locus_tag=GCA000144955_00677;product=Membrane protein;Parent=GCA000144955_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000180420.1,SO:0001217,UniParc:UPI00003B14D0,UniRef:UniRef100_A0A7Z7QX73,UniRef:UniRef50_Q2G0A8,UniRef:UniRef90_Q2G0A8
contig_1	Pyrodigal	gene	727701	729254	.	+	.	ID=GCA000144955_00678_gene;locus_tag=GCA000144955_00678;gene=citT
contig_1	Pyrodigal	CDS	727701	729254	.	+	0	ID=GCA000144955_00678;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000144955_00678;product=Sodium-dependent dicarboxylate transporter SdcS;gene=citT;Parent=GCA000144955_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_001288106.1,SO:0001217,UniParc:UPI0001DD9854,UniRef:UniRef100_UPI0001DD9854,UniRef:UniRef50_M7PBF6,UniRef:UniRef90_A0A9N8IKH9
contig_1	Pyrodigal	gene	729340	730713	.	+	.	ID=GCA000144955_00679_gene;locus_tag=GCA000144955_00679;gene=phrB
contig_1	Pyrodigal	CDS	729340	730713	.	+	0	ID=GCA000144955_00679;Name=Deoxyribodipyrimidine photo-lyase;locus_tag=GCA000144955_00679;product=Deoxyribodipyrimidine photo-lyase;gene=phrB;Parent=GCA000144955_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0415,COG:L,RefSeq:WP_000257453.1,SO:0001217,UniParc:UPI0001DD9855,UniRef:UniRef100_UPI0001DD9855,UniRef:UniRef50_A0A0E7MV68,UniRef:UniRef90_A0A390QMX5
contig_1	Pyrodigal	gene	730868	731152	.	-	.	ID=GCA000144955_00680_gene;locus_tag=GCA000144955_00680
contig_1	Pyrodigal	CDS	730868	731152	.	-	0	ID=GCA000144955_00680;Name=DUF3995 domain-containing protein;locus_tag=GCA000144955_00680;product=DUF3995 domain-containing protein;Parent=GCA000144955_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154461.1,SO:0001217,UniParc:UPI0001DD9856,UniRef:UniRef100_UPI0001DD9856,UniRef:UniRef50_A0A2T4Q280,UniRef:UniRef90_Q2G0A5
contig_1	Pyrodigal	gene	731149	731766	.	-	.	ID=GCA000144955_00681_gene;locus_tag=GCA000144955_00681
contig_1	Pyrodigal	CDS	731149	731766	.	-	0	ID=GCA000144955_00681;Name=DUF1361 domain-containing protein;locus_tag=GCA000144955_00681;product=DUF1361 domain-containing protein;Parent=GCA000144955_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4330,COG:S,RefSeq:WP_001191869.1,SO:0001217,UniParc:UPI0001DD9857,UniRef:UniRef100_UPI0001DD9857,UniRef:UniRef50_Q2G0A4,UniRef:UniRef90_Q2G0A4
contig_1	Pyrodigal	gene	731952	732374	.	-	.	ID=GCA000144955_00682_gene;locus_tag=GCA000144955_00682;gene=aF0104
contig_1	Pyrodigal	CDS	731952	732374	.	-	0	ID=GCA000144955_00682;Name=PPC domain-containing protein;locus_tag=GCA000144955_00682;product=PPC domain-containing protein;gene=aF0104;Parent=GCA000144955_00682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1661,COG:R,RefSeq:WP_000776018.1,SO:0001217,UniParc:UPI000005485D,UniRef:UniRef100_Q2G0A3,UniRef:UniRef50_Q2G0A3,UniRef:UniRef90_Q2G0A3
contig_1	Pyrodigal	gene	732583	733749	.	+	.	ID=GCA000144955_00683_gene;locus_tag=GCA000144955_00683;gene=norA
contig_1	Pyrodigal	CDS	732583	733749	.	+	0	ID=GCA000144955_00683;Name=Quinolone resistance protein NorA;locus_tag=GCA000144955_00683;product=Quinolone resistance protein NorA;Dbxref=GO:0005886,GO:0042910;gene=norA;Parent=GCA000144955_00683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001041275.1,SO:0001217,UniParc:UPI0001DD9858,UniRef:UniRef100_UPI0001DD9858,UniRef:UniRef50_P0A0J4,UniRef:UniRef90_P0A0J4
contig_1	Pyrodigal	gene	734121	734573	.	+	.	ID=GCA000144955_00684_gene;locus_tag=GCA000144955_00684
contig_1	Pyrodigal	CDS	734121	734573	.	+	0	ID=GCA000144955_00684;Name=Lipoprotein;locus_tag=GCA000144955_00684;product=Lipoprotein;Parent=GCA000144955_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000216721.1,SO:0001217,UniParc:UPI0001DD9859,UniRef:UniRef100_UPI0001DD9859,UniRef:UniRef50_Q2G0A1,UniRef:UniRef90_Q2G0A1
contig_1	Pyrodigal	gene	734747	735229	.	+	.	ID=GCA000144955_00685_gene;locus_tag=GCA000144955_00685;gene=ybaK
contig_1	Pyrodigal	CDS	734747	735229	.	+	0	ID=GCA000144955_00685;Name=Cys-tRNA(Pro) deacylase;locus_tag=GCA000144955_00685;product=Cys-tRNA(Pro) deacylase;Dbxref=GO:0002161,GO:0043039;gene=ybaK;Parent=GCA000144955_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,KEGG:K03976,RefSeq:WP_001107241.1,SO:0001217,UniParc:UPI00000547C1,UniRef:UniRef100_Q2G0A0,UniRef:UniRef50_A0A2T4MLR5,UniRef:UniRef90_A0A0U1MHA1;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	735478	736242	.	+	.	ID=GCA000144955_00686_gene;locus_tag=GCA000144955_00686;gene=glpR
contig_1	Pyrodigal	CDS	735478	736242	.	+	0	ID=GCA000144955_00686;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000144955_00686;product=HTH deoR-type domain-containing protein;gene=glpR;Parent=GCA000144955_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_078055755.1,SO:0001217,UniParc:UPI00098F5F90,UniRef:UniRef100_A0A6A8FCD2,UniRef:UniRef50_Q2G240,UniRef:UniRef90_Q2G240
contig_1	Pyrodigal	gene	736239	737159	.	+	.	ID=GCA000144955_00687_gene;locus_tag=GCA000144955_00687;gene=pfkB
contig_1	Pyrodigal	CDS	736239	737159	.	+	0	ID=GCA000144955_00687;Name=1-phosphofructokinase;locus_tag=GCA000144955_00687;product=1-phosphofructokinase;Dbxref=GO:0008662;gene=pfkB;Parent=GCA000144955_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_000640741.1,SO:0001217,UniParc:UPI0001DD985B,UniRef:UniRef100_UPI0001DD985B,UniRef:UniRef50_Q9KWK1,UniRef:UniRef90_Q9KWK1;ec_number=2.7.1.56
contig_1	Pyrodigal	gene	737165	739129	.	+	.	ID=GCA000144955_00688_gene;locus_tag=GCA000144955_00688;gene=ptsN
contig_1	Pyrodigal	CDS	737165	739129	.	+	0	ID=GCA000144955_00688;Name=PTS fructose transporter subunit IIC;locus_tag=GCA000144955_00688;product=PTS fructose transporter subunit IIC;gene=ptsN;Parent=GCA000144955_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_001266559.1,SO:0001217,UniParc:UPI0001DD99EA,UniRef:UniRef100_UPI0001DD99EA,UniRef:UniRef50_B9DK53,UniRef:UniRef90_A0A389U8J0
contig_1	Pyrodigal	gene	739437	740618	.	+	.	ID=GCA000144955_00689_gene;locus_tag=GCA000144955_00689;gene=nagA
contig_1	Pyrodigal	CDS	739437	740618	.	+	0	ID=GCA000144955_00689;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000144955_00689;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA000144955_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1820,COG:G,KEGG:K01443,RefSeq:WP_001292262.1,SO:0001217,UniParc:UPI0001DD99EB,UniRef:UniRef100_UPI0001DD99EB,UniRef:UniRef50_A0A0D6G8V3,UniRef:UniRef90_A0A0D6G8V3;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	740839	742188	.	+	.	ID=GCA000144955_00690_gene;locus_tag=GCA000144955_00690;gene=mpfA
contig_1	Pyrodigal	CDS	740839	742188	.	+	0	ID=GCA000144955_00690;Name=HlyC/CorC family transporter;locus_tag=GCA000144955_00690;product=HlyC/CorC family transporter;gene=mpfA;Parent=GCA000144955_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,KEGG:K03699,RefSeq:WP_000450258.1,SO:0001217,UniParc:UPI00005FE31F,UniRef:UniRef100_A0A2S6D418,UniRef:UniRef50_A0A380G318,UniRef:UniRef90_Q2G2T9
contig_1	Pyrodigal	gene	742398	743237	.	+	.	ID=GCA000144955_00691_gene;locus_tag=GCA000144955_00691;gene=aRA1
contig_1	Pyrodigal	CDS	742398	743237	.	+	0	ID=GCA000144955_00691;Name=Aldo/keto reductase;locus_tag=GCA000144955_00691;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000144955_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000931237.1,SO:0001217,UniParc:UPI00000547BA,UniRef:UniRef100_Q2G2T8,UniRef:UniRef50_A0A7U7PXK1,UniRef:UniRef90_A0A0U1MH70
contig_1	Pyrodigal	gene	743369	744352	.	+	.	ID=GCA000144955_00692_gene;locus_tag=GCA000144955_00692;gene=csbB
contig_1	Pyrodigal	CDS	743369	744352	.	+	0	ID=GCA000144955_00692;Name=lipoteichoic acid-specific glycosylation protein CsbB;locus_tag=GCA000144955_00692;product=lipoteichoic acid-specific glycosylation protein CsbB;gene=csbB;Parent=GCA000144955_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702782,COG:COG0463,COG:M,KEGG:K25617,RefSeq:WP_000702792.1,SO:0001217,UniParc:UPI0001DD99EC,UniRef:UniRef100_UPI0001DD99EC,UniRef:UniRef50_B9DKD4,UniRef:UniRef90_A0AAE8PA40;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	744425	745480	.	-	.	ID=GCA000144955_00693_gene;locus_tag=GCA000144955_00693;gene=saeS
contig_1	Pyrodigal	CDS	744425	745480	.	-	0	ID=GCA000144955_00693;Name=two-component system sensor histidine kinase SaeS;locus_tag=GCA000144955_00693;product=two-component system sensor histidine kinase SaeS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036;gene=saeS;Parent=GCA000144955_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000244412,COG:COG0642,COG:T,KEGG:K10681,RefSeq:WP_000244415.1,SO:0001217,UniParc:UPI00000D7882,UniRef:UniRef100_Q99VR8,UniRef:UniRef50_Q2G2U1,UniRef:UniRef90_Q2G2U1;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	745480	746166	.	-	.	ID=GCA000144955_00694_gene;locus_tag=GCA000144955_00694;gene=saeR
contig_1	Pyrodigal	CDS	745480	746166	.	-	0	ID=GCA000144955_00694;Name=response regulator transcription factor SaeR;locus_tag=GCA000144955_00694;product=response regulator transcription factor SaeR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=saeR;Parent=GCA000144955_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000149344,BlastRules:WP_001830352,COG:COG0745,COG:TK,KEGG:K10682,RefSeq:WP_000149344.1,SO:0001217,UniParc:UPI00000547B6,UniRef:UniRef100_Q2G2G2,UniRef:UniRef50_Q2G2G2,UniRef:UniRef90_Q2G2G2
contig_1	Pyrodigal	gene	746141	746614	.	-	.	ID=GCA000144955_00695_gene;locus_tag=GCA000144955_00695;gene=doxX
contig_1	Pyrodigal	CDS	746141	746614	.	-	0	ID=GCA000144955_00695;Name=DoxX family protein;locus_tag=GCA000144955_00695;product=DoxX family protein;gene=doxX;Parent=GCA000144955_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037807.1,SO:0001217,UniParc:UPI000018DB08,UniRef:UniRef100_Q2G2G1,UniRef:UniRef50_Q2G2G1,UniRef:UniRef90_Q2G2G1
contig_1	Pyrodigal	gene	746956	747396	.	-	.	ID=GCA000144955_00696_gene;locus_tag=GCA000144955_00696
contig_1	Pyrodigal	CDS	746956	747396	.	-	0	ID=GCA000144955_00696;Name=DM13 domain-containing protein;locus_tag=GCA000144955_00696;product=DM13 domain-containing protein;Parent=GCA000144955_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093557.1,SO:0001217,UniParc:UPI00005FE322,UniRef:UniRef100_A0A227LZW5,UniRef:UniRef50_Q2G2G0,UniRef:UniRef90_Q2G2G0
contig_1	Pyrodigal	gene	747676	748260	.	-	.	ID=GCA000144955_00697_gene;locus_tag=GCA000144955_00697
contig_1	Pyrodigal	CDS	747676	748260	.	-	0	ID=GCA000144955_00697;Name=Membrane protein;locus_tag=GCA000144955_00697;product=Membrane protein;Parent=GCA000144955_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000637683.1,SO:0001217,UniParc:UPI00005FE323,UniRef:UniRef100_A0A0U1MG84,UniRef:UniRef50_Q2G2F9,UniRef:UniRef90_Q2G2F9
contig_1	Pyrodigal	gene	748359	749072	.	-	.	ID=GCA000144955_00698_gene;locus_tag=GCA000144955_00698;gene=queE
contig_1	Pyrodigal	CDS	748359	749072	.	-	0	ID=GCA000144955_00698;Name=7-carboxy-7-deazaguanine synthase QueE;locus_tag=GCA000144955_00698;product=7-carboxy-7-deazaguanine synthase QueE;Dbxref=GO:0006400,GO:0051539,GO:1904047;gene=queE;Parent=GCA000144955_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_001062977.1,SO:0001217,UniParc:UPI0001DA1FCC,UniRef:UniRef100_A0AA40MHT9,UniRef:UniRef50_Q81G67,UniRef:UniRef90_A0A7Z7QY94;ec_number=4.3.99.3
contig_1	Pyrodigal	gene	749076	749495	.	-	.	ID=GCA000144955_00699_gene;locus_tag=GCA000144955_00699;gene=queD
contig_1	Pyrodigal	CDS	749076	749495	.	-	0	ID=GCA000144955_00699;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA000144955_00699;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008616;gene=queD;Parent=GCA000144955_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,RefSeq:WP_000941336.1,SO:0001217,UniParc:UPI00000D7847,UniRef:UniRef100_Q2G1X5,UniRef:UniRef50_A0A0D6XSA1,UniRef:UniRef90_A0A2S6D445;ec_number=4.2.3.12
contig_1	Pyrodigal	gene	749497	750165	.	-	.	ID=GCA000144955_00700_gene;locus_tag=GCA000144955_00700;gene=queC
contig_1	Pyrodigal	CDS	749497	750165	.	-	0	ID=GCA000144955_00700;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA000144955_00700;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0005524,GO:0008270,GO:0008616,GO:0016879;gene=queC;Parent=GCA000144955_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,KEGG:K06920,RefSeq:WP_000446719.1,SO:0001217,UniParc:UPI0001DD99ED,UniRef:UniRef100_UPI0001DD99ED,UniRef:UniRef50_O31675,UniRef:UniRef90_Q2G1X6;ec_number=6.3.4.20
contig_1	Pyrodigal	gene	750516	751109	.	+	.	ID=GCA000144955_00701_gene;locus_tag=GCA000144955_00701;gene=pabA
contig_1	Pyrodigal	CDS	750516	751109	.	+	0	ID=GCA000144955_00701;Name=Aminodeoxychorismate/anthranilate synthase component II;locus_tag=GCA000144955_00701;product=Aminodeoxychorismate/anthranilate synthase component II;gene=pabA;Parent=GCA000144955_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000604511.1,SO:0001217,UniParc:UPI0001DD99EE,UniRef:UniRef100_UPI0001DD99EE,UniRef:UniRef50_A0A2T7BWH4,UniRef:UniRef90_A0A2S6D430
contig_1	Pyrodigal	gene	751093	752244	.	+	.	ID=GCA000144955_00702_gene;locus_tag=GCA000144955_00702;gene=trpE
contig_1	Pyrodigal	CDS	751093	752244	.	+	0	ID=GCA000144955_00702;Name=Aminodeoxychorismate synthase component I;locus_tag=GCA000144955_00702;product=Aminodeoxychorismate synthase component I;gene=trpE;Parent=GCA000144955_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_001217807.1,SO:0001217,UniParc:UPI0001DD99EF,UniRef:UniRef100_UPI0001DD99EF,UniRef:UniRef50_A0A418IG77,UniRef:UniRef90_A0AAE2ZQN1
contig_1	Pyrodigal	gene	752244	752852	.	+	.	ID=GCA000144955_00703_gene;locus_tag=GCA000144955_00703;gene=ilvE
contig_1	Pyrodigal	CDS	752244	752852	.	+	0	ID=GCA000144955_00703;Name=Aminodeoxychorismate lyase;locus_tag=GCA000144955_00703;product=Aminodeoxychorismate lyase;gene=ilvE;Parent=GCA000144955_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_001175785.1,SO:0001217,UniParc:UPI0001DD99F0,UniRef:UniRef100_UPI0001DD99F0,UniRef:UniRef50_A0A380H6Y2,UniRef:UniRef90_A0AAE8TJ44
contig_1	Infernal	gene	752984	753063	.	-	.	ID=GCA000144955_00704_gene;locus_tag=GCA000144955_00704;gene=sau-66
contig_1	Infernal	ncRNA	752984	753063	2.2e-19	-	.	ID=GCA000144955_00704;Name=Staphylococcus sRNA sau-66;locus_tag=GCA000144955_00704;product=Staphylococcus sRNA sau-66;Dbxref=RFAM:RF02395;Parent=GCA000144955_00704_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02395
contig_1	Pyrodigal	gene	753222	753932	.	+	.	ID=GCA000144955_00705_gene;locus_tag=GCA000144955_00705;gene=pxpB
contig_1	Pyrodigal	CDS	753222	753932	.	+	0	ID=GCA000144955_00705;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000144955_00705;product=Carboxyltransferase domain-containing protein;gene=pxpB;Parent=GCA000144955_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000708692.1,SO:0001217,UniParc:UPI00000547AA,UniRef:UniRef100_Q2G095,UniRef:UniRef50_A0A143PAI6,UniRef:UniRef90_Q2G095
contig_1	Pyrodigal	gene	753916	754920	.	+	.	ID=GCA000144955_00706_gene;locus_tag=GCA000144955_00706;gene=pxpC
contig_1	Pyrodigal	CDS	753916	754920	.	+	0	ID=GCA000144955_00706;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000144955_00706;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000144955_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000022326.1,SO:0001217,UniParc:UPI0001DD99F1,UniRef:UniRef100_A0A898CPU0,UniRef:UniRef50_Q2G094,UniRef:UniRef90_Q2G094
contig_1	Pyrodigal	gene	755394	757334	.	+	.	ID=GCA000144955_00707_gene;locus_tag=GCA000144955_00707;gene=ltaS
contig_1	Pyrodigal	CDS	755394	757334	.	+	0	ID=GCA000144955_00707;Name=polyglycerol-phosphate lipoteichoic acid synthase LtaS;locus_tag=GCA000144955_00707;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;Dbxref=GO:0005576,GO:0005886,GO:0016740,GO:0046872,GO:0070395,GO:0071555;gene=ltaS;Parent=GCA000144955_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000098285,COG:COG1368,COG:M,KEGG:K19005,RefSeq:WP_000098286.1,SO:0001217,UniParc:UPI00005FE32B,UniRef:UniRef100_Q2YSL2,UniRef:UniRef50_Q797B3,UniRef:UniRef90_Q2G093;ec_number=2.7.8.20
contig_1	Pyrodigal	gene	757611	759488	.	+	.	ID=GCA000144955_00708_gene;locus_tag=GCA000144955_00708;gene=abc-f
contig_1	Pyrodigal	CDS	757611	759488	.	+	0	ID=GCA000144955_00708;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000144955_00708;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000144955_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,SO:0001217,UniRef:UniRef50_S2Y7N2,UniRef:UniRef90_A0A7U7PXX1
contig_1	Pyrodigal	gene	759500	761281	.	+	.	ID=GCA000144955_00709_gene;locus_tag=GCA000144955_00709;gene=recQ
contig_1	Pyrodigal	CDS	759500	761281	.	+	0	ID=GCA000144955_00709;Name=DNA helicase RecQ;locus_tag=GCA000144955_00709;product=DNA helicase RecQ;Dbxref=GO:0003678,GO:0006310,GO:0009432;gene=recQ;Parent=GCA000144955_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000983677.1,SO:0001217,UniParc:UPI00000547A6,UniRef:UniRef100_Q2G090,UniRef:UniRef50_Q2G090,UniRef:UniRef90_Q2G090;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	761503	762480	.	+	.	ID=GCA000144955_00710_gene;locus_tag=GCA000144955_00710;gene=opuBA
contig_1	Pyrodigal	CDS	761503	762480	.	+	0	ID=GCA000144955_00710;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_00710;product=ABC transporter ATP-binding protein;gene=opuBA;Parent=GCA000144955_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000589258.1,SO:0001217,UniParc:UPI0001DD99F3,UniRef:UniRef100_UPI0001DD99F3,UniRef:UniRef50_D7UZC8,UniRef:UniRef90_A0A389QD38
contig_1	Pyrodigal	gene	762473	763987	.	+	.	ID=GCA000144955_00711_gene;locus_tag=GCA000144955_00711;gene=egtUBC
contig_1	Pyrodigal	CDS	762473	763987	.	+	0	ID=GCA000144955_00711;Name=putative ergothioneine transporter EgtUBC;locus_tag=GCA000144955_00711;product=putative ergothioneine transporter EgtUBC;Dbxref=GO:0015675,GO:0016597,GO:0016787,GO:0022857,GO:0031460,GO:0043190;gene=egtUBC;Parent=GCA000144955_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000180999.1,SO:0001217,UniParc:UPI0001DD99F4,UniRef:UniRef100_UPI0001DD99F4,UniRef:UniRef50_A0A0H2XK79,UniRef:UniRef90_A0A0H2XK79
contig_1	Pyrodigal	gene	764227	765285	.	+	.	ID=GCA000144955_00712_gene;locus_tag=GCA000144955_00712;gene=hisC
contig_1	Pyrodigal	CDS	764227	765285	.	+	0	ID=GCA000144955_00712;Name=histidinol-phosphate transaminase;locus_tag=GCA000144955_00712;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000144955_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_000663027.1,SO:0001217,UniParc:UPI0001DD99F5,UniRef:UniRef100_UPI0001DD99F5,UniRef:UniRef50_Q2G087,UniRef:UniRef90_Q2G087;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	765444	765986	.	+	.	ID=GCA000144955_00713_gene;locus_tag=GCA000144955_00713;gene=yorC
contig_1	Pyrodigal	CDS	765444	765986	.	+	0	ID=GCA000144955_00713;Name=Putative 5'(3')-deoxyribonucleotidase;locus_tag=GCA000144955_00713;product=Putative 5'(3')-deoxyribonucleotidase;Dbxref=GO:0008253,GO:0009223,GO:0046872;gene=yorC;Parent=GCA000144955_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4502,COG:F,RefSeq:WP_000197267.1,SO:0001217,UniParc:UPI0001DD99F6,UniRef:UniRef100_UPI0001DD99F6,UniRef:UniRef50_Q5HR07,UniRef:UniRef90_P66840;ec_number=3.1.3.-
contig_1	Infernal	gene	765965	766214	.	-	.	ID=GCA000144955_00714_gene;locus_tag=GCA000144955_00714;gene=S35
contig_1	Infernal	ncRNA	765965	766214	8e-13	-	.	ID=GCA000144955_00714;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00714;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00714_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	766593	767510	.	-	.	ID=GCA000144955_00715_gene;locus_tag=GCA000144955_00715;gene=lCB5
contig_1	Pyrodigal	CDS	766593	767510	.	-	0	ID=GCA000144955_00715;Name=Putative lipid kinase SA0681;locus_tag=GCA000144955_00715;product=Putative lipid kinase SA0681;Dbxref=GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=lCB5;Parent=GCA000144955_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_000429020.1,SO:0001217,UniParc:UPI0001DD99F8,UniRef:UniRef100_UPI0001DD99F8,UniRef:UniRef50_Q6GIR5,UniRef:UniRef90_Q6GIR5;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	767792	769297	.	-	.	ID=GCA000144955_00716_gene;locus_tag=GCA000144955_00716;gene=pTR2
contig_1	Pyrodigal	CDS	767792	769297	.	-	0	ID=GCA000144955_00716;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_00716;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=pTR2;Parent=GCA000144955_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3104,COG:E,RefSeq:WP_000193751.1,SO:0001217,UniParc:UPI000005479E,UniRef:UniRef100_Q2G082,UniRef:UniRef50_Q2G082,UniRef:UniRef90_Q2G082
contig_1	Pyrodigal	gene	769637	770137	.	-	.	ID=GCA000144955_00717_gene;locus_tag=GCA000144955_00717;gene=queF
contig_1	Pyrodigal	CDS	769637	770137	.	-	0	ID=GCA000144955_00717;Name=preQ(1) synthase;locus_tag=GCA000144955_00717;product=preQ(1) synthase;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0046857;gene=queF;Parent=GCA000144955_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0780,COG:J,RefSeq:WP_000930014.1,SO:0001217,UniParc:UPI000005479D,UniRef:UniRef100_Q2G081,UniRef:UniRef50_Q2G081,UniRef:UniRef90_Q2G081;ec_number=1.7.1.13
contig_1	Pyrodigal	gene	770157	771023	.	-	.	ID=GCA000144955_00718_gene;locus_tag=GCA000144955_00718;gene=rhaT
contig_1	Pyrodigal	CDS	770157	771023	.	-	0	ID=GCA000144955_00718;Name=EamA domain-containing protein;locus_tag=GCA000144955_00718;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000144955_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_001068497.1,SO:0001217,UniParc:UPI00000D9CFA,UniRef:UniRef100_Q2G080,UniRef:UniRef50_Q2G080,UniRef:UniRef90_Q2G080
contig_1	Pyrodigal	gene	771824	772222	.	+	.	ID=GCA000144955_00719_gene;locus_tag=GCA000144955_00719;gene=nrdI
contig_1	Pyrodigal	CDS	771824	772222	.	+	0	ID=GCA000144955_00719;Name=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;locus_tag=GCA000144955_00719;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;Dbxref=GO:0009263,GO:0010181,GO:0036211;gene=nrdI;Parent=GCA000144955_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1780,COG:F,KEGG:K03647,RefSeq:WP_000692521.1,SO:0001217,UniParc:UPI00001304E3,UniRef:UniRef100_Q2G079,UniRef:UniRef50_Q2G079,UniRef:UniRef90_Q2G079
contig_1	Pyrodigal	gene	772185	774290	.	+	.	ID=GCA000144955_00720_gene;locus_tag=GCA000144955_00720;gene=nrdE
contig_1	Pyrodigal	CDS	772185	774290	.	+	0	ID=GCA000144955_00720;Name=class 1b ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000144955_00720;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0006260;gene=nrdE;Parent=GCA000144955_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_000855505.1,SO:0001217,UniParc:UPI000005479A,UniRef:UniRef100_Q2G078,UniRef:UniRef50_A0A240A193,UniRef:UniRef90_A0AAE3D4Q3;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	774408	775379	.	+	.	ID=GCA000144955_00721_gene;locus_tag=GCA000144955_00721;gene=nrdF
contig_1	Pyrodigal	CDS	774408	775379	.	+	0	ID=GCA000144955_00721;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000144955_00721;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009263;gene=nrdF;Parent=GCA000144955_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_000562498.1,SO:0001217,UniParc:UPI0000054799,UniRef:UniRef100_Q2G077,UniRef:UniRef50_A0A1L8Y4Q5,UniRef:UniRef90_A0A1L8Y4Q5;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	776133	777104	.	+	.	ID=GCA000144955_00722_gene;locus_tag=GCA000144955_00722;gene=ceuB
contig_1	Pyrodigal	CDS	776133	777104	.	+	0	ID=GCA000144955_00722;Name=FatD;locus_tag=GCA000144955_00722;product=FatD;gene=ceuB;Parent=GCA000144955_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4606,COG:P,RefSeq:WP_014532744.1,SO:0001217,UniParc:UPI0001DD99F9,UniRef:UniRef100_UPI0001DD99F9,UniRef:UniRef50_P94418,UniRef:UniRef90_A0A0D6I039
contig_1	Pyrodigal	gene	777091	778047	.	+	.	ID=GCA000144955_00723_gene;locus_tag=GCA000144955_00723;gene=ceuC
contig_1	Pyrodigal	CDS	777091	778047	.	+	0	ID=GCA000144955_00723;Name=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000144955_00723;product=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ceuC;Parent=GCA000144955_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4605,COG:P,RefSeq:WP_001245583.1,SO:0001217,UniParc:UPI0001DD99FA,UniRef:UniRef100_UPI0001DD99FA,UniRef:UniRef50_W8TNI3,UniRef:UniRef90_W8TNI3
contig_1	Pyrodigal	gene	778044	778805	.	+	.	ID=GCA000144955_00724_gene;locus_tag=GCA000144955_00724;gene=ceuD
contig_1	Pyrodigal	CDS	778044	778805	.	+	0	ID=GCA000144955_00724;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_00724;product=ABC transporter domain-containing protein;gene=ceuD;Parent=GCA000144955_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4604,COG:P,RefSeq:WP_000616867.1,SO:0001217,UniParc:UPI0001DD9B8A,UniRef:UniRef100_UPI0001DD9B8A,UniRef:UniRef50_Q81XB3,UniRef:UniRef90_Q2G072
contig_1	Pyrodigal	gene	778924	779952	.	+	.	ID=GCA000144955_00725_gene;locus_tag=GCA000144955_00725;gene=ceuA
contig_1	Pyrodigal	CDS	778924	779952	.	+	0	ID=GCA000144955_00725;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000144955_00725;product=Fe/B12 periplasmic-binding domain-containing protein;gene=ceuA;Parent=GCA000144955_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4607,COG:P,RefSeq:WP_000754450.1,SO:0001217,UniParc:UPI0001DD9B8B,UniRef:UniRef100_UPI0001DD9B8B,UniRef:UniRef50_A0A239ZZP9,UniRef:UniRef90_Q2G071
contig_1	Pyrodigal	gene	780213	780527	.	-	.	ID=GCA000144955_00726_gene;locus_tag=GCA000144955_00726;gene=hot13
contig_1	Pyrodigal	CDS	780213	780527	.	-	0	ID=GCA000144955_00726;Name=CHY-type domain-containing protein;locus_tag=GCA000144955_00726;product=CHY-type domain-containing protein;gene=hot13;Parent=GCA000144955_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4357,COG:O,RefSeq:WP_001127269.1,SO:0001217,UniParc:UPI00000D78A9,UniRef:UniRef100_Q2G070,UniRef:UniRef50_A0A166MHJ2,UniRef:UniRef90_Q2G070
contig_1	Pyrodigal	gene	780545	781468	.	-	.	ID=GCA000144955_00727_gene;locus_tag=GCA000144955_00727;gene=murB
contig_1	Pyrodigal	CDS	780545	781468	.	-	0	ID=GCA000144955_00727;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000144955_00727;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000144955_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_000608439.1,SO:0001217,UniParc:UPI0001B3AD7C,UniRef:UniRef100_A0A0U1MH54,UniRef:UniRef50_A4ILI2,UniRef:UniRef90_Q2G069;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	781595	782113	.	-	.	ID=GCA000144955_00728_gene;locus_tag=GCA000144955_00728;gene=grpB
contig_1	Pyrodigal	CDS	781595	782113	.	-	0	ID=GCA000144955_00728;Name=GrpB family protein;locus_tag=GCA000144955_00728;product=GrpB family protein;gene=grpB;Parent=GCA000144955_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2320,COG:R,RefSeq:WP_000287202.1,SO:0001217,UniParc:UPI0001DA202F,UniRef:UniRef100_A0A6B0CN10,UniRef:UniRef50_Q5HQZ0,UniRef:UniRef90_Q2G068
contig_1	Pyrodigal	gene	782233	783111	.	+	.	ID=GCA000144955_00729_gene;locus_tag=GCA000144955_00729
contig_1	Pyrodigal	CDS	782233	783111	.	+	0	ID=GCA000144955_00729;Name=EMYY motif lipoprotein;locus_tag=GCA000144955_00729;product=EMYY motif lipoprotein;Parent=GCA000144955_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000724888.1,SO:0001217,UniParc:UPI0001DD9B8C,UniRef:UniRef100_UPI0001DD9B8C,UniRef:UniRef50_A0A653Z4B0,UniRef:UniRef90_Q2G067
contig_1	Pyrodigal	gene	783265	783585	.	+	.	ID=GCA000144955_00730_gene;locus_tag=GCA000144955_00730;gene=ytxJ
contig_1	Pyrodigal	CDS	783265	783585	.	+	0	ID=GCA000144955_00730;Name=Bacillithiol system redox-active protein YtxJ;locus_tag=GCA000144955_00730;product=Bacillithiol system redox-active protein YtxJ;gene=ytxJ;Parent=GCA000144955_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26959,RefSeq:WP_000985617.1,SO:0001217,UniParc:UPI00000D78B4,UniRef:UniRef100_Q2G066,UniRef:UniRef50_Q2G066,UniRef:UniRef90_Q2G066
contig_1	Pyrodigal	gene	784010	785134	.	+	.	ID=GCA000144955_00731_gene;locus_tag=GCA000144955_00731;gene=glxK
contig_1	Pyrodigal	CDS	784010	785134	.	+	0	ID=GCA000144955_00731;Name=Glycerate kinase;locus_tag=GCA000144955_00731;product=Glycerate kinase;gene=glxK;Parent=GCA000144955_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_000866754.1,SO:0001217,UniParc:UPI0001DD9B8D,UniRef:UniRef100_UPI0001DD9B8D,UniRef:UniRef50_A0A6N3ELY9,UniRef:UniRef90_Q2G065;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	785322	786548	.	-	.	ID=GCA000144955_00732_gene;locus_tag=GCA000144955_00732;gene=pepT
contig_1	Pyrodigal	CDS	785322	786548	.	-	0	ID=GCA000144955_00732;Name=peptidase T;locus_tag=GCA000144955_00732;product=peptidase T;Dbxref=GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0043171,GO:0045148;gene=pepT;Parent=GCA000144955_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000795812.1,SO:0001217,UniParc:UPI00019F4D66,UniRef:UniRef100_A0A7Z7W0Z5,UniRef:UniRef50_P55179,UniRef:UniRef90_Q2G064;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	786562	787056	.	-	.	ID=GCA000144955_00733_gene;locus_tag=GCA000144955_00733;gene=yjjB
contig_1	Pyrodigal	CDS	786562	787056	.	-	0	ID=GCA000144955_00733;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000144955_00733;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000144955_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000899890.1,SO:0001217,UniParc:UPI00000522D1,UniRef:UniRef100_Q2G063,UniRef:UniRef50_Q2G063,UniRef:UniRef90_Q2G063
contig_1	Pyrodigal	gene	787074	787835	.	-	.	ID=GCA000144955_00734_gene;locus_tag=GCA000144955_00734;gene=yjjP
contig_1	Pyrodigal	CDS	787074	787835	.	-	0	ID=GCA000144955_00734;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000144955_00734;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000144955_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_001113406.1,SO:0001217,UniParc:UPI000005226C,UniRef:UniRef100_Q2G062,UniRef:UniRef50_A0A853V662,UniRef:UniRef90_Q2G062
contig_1	Pyrodigal	gene	788031	789101	.	-	.	ID=GCA000144955_00735_gene;locus_tag=GCA000144955_00735;gene=gGDEF
contig_1	Pyrodigal	CDS	788031	789101	.	-	0	ID=GCA000144955_00735;Name=putative membrane protein MW0708;locus_tag=GCA000144955_00735;product=putative membrane protein MW0708;Dbxref=GO:0000155,GO:0005886,GO:0043709,GO:0052621,GO:0071555,GO:1902201;gene=gGDEF;Parent=GCA000144955_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2199,COG:T,RefSeq:WP_000460983.1,SO:0001217,UniParc:UPI0000054788,UniRef:UniRef100_Q2G061,UniRef:UniRef50_Q5HQY3,UniRef:UniRef90_Q2G061
contig_1	Pyrodigal	gene	789419	790474	.	+	.	ID=GCA000144955_00736_gene;locus_tag=GCA000144955_00736;gene=rfe
contig_1	Pyrodigal	CDS	789419	790474	.	+	0	ID=GCA000144955_00736;Name=Glycosyl transferase family protein;locus_tag=GCA000144955_00736;product=Glycosyl transferase family protein;gene=rfe;Parent=GCA000144955_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_000258151.1,SO:0001217,UniParc:UPI0000054787,UniRef:UniRef100_Q2G060,UniRef:UniRef50_A0A380GAZ8,UniRef:UniRef90_Q53761;ec_number=2.7.8.35
contig_1	Pyrodigal	gene	790646	791287	.	-	.	ID=GCA000144955_00737_gene;locus_tag=GCA000144955_00737;gene=yIH1
contig_1	Pyrodigal	CDS	790646	791287	.	-	0	ID=GCA000144955_00737;Name=YigZ family protein;locus_tag=GCA000144955_00737;product=YigZ family protein;gene=yIH1;Parent=GCA000144955_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1739,COG:R,RefSeq:WP_000192945.1,SO:0001217,UniParc:UPI0001DD9B8E,UniRef:UniRef100_UPI0001DD9B8E,UniRef:UniRef50_Q2G059,UniRef:UniRef90_Q2G059
contig_1	Pyrodigal	gene	791431	792297	.	+	.	ID=GCA000144955_00738_gene;locus_tag=GCA000144955_00738;gene=fakB1
contig_1	Pyrodigal	CDS	791431	792297	.	+	0	ID=GCA000144955_00738;Name=fatty acid kinase binding subunit FakB1;locus_tag=GCA000144955_00738;product=fatty acid kinase binding subunit FakB1;Dbxref=GO:0008289;gene=fakB1;Parent=GCA000144955_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1307,COG:I,RefSeq:WP_000686342.1,SO:0001217,UniParc:UPI0000139C1F,UniRef:UniRef100_Q8NXM4,UniRef:UniRef50_P0A0N1,UniRef:UniRef90_P0A0N1
contig_1	Pyrodigal	gene	792661	793743	.	+	.	ID=GCA000144955_00739_gene;locus_tag=GCA000144955_00739;gene=comFA
contig_1	Pyrodigal	CDS	792661	793743	.	+	0	ID=GCA000144955_00739;Name=Comf operon protein 1;locus_tag=GCA000144955_00739;product=Comf operon protein 1;gene=comFA;Parent=GCA000144955_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4098,COG:L,RefSeq:WP_044025869.1,SO:0001217,UniParc:UPI0005C57874,UniRef:UniRef100_UPI0005C57874,UniRef:UniRef50_S2XU73,UniRef:UniRef90_X5EK03
contig_1	Pyrodigal	gene	793736	794410	.	+	.	ID=GCA000144955_00740_gene;locus_tag=GCA000144955_00740;gene=comFC
contig_1	Pyrodigal	CDS	793736	794410	.	+	0	ID=GCA000144955_00740;Name=ComF family protein;locus_tag=GCA000144955_00740;product=ComF family protein;gene=comFC;Parent=GCA000144955_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1040,COG:R,KEGG:K02242,RefSeq:WP_001057963.1,SO:0001217,UniParc:UPI0001DD9B90,UniRef:UniRef100_UPI0001DD9B90,UniRef:UniRef50_Q2G056,UniRef:UniRef90_Q2G056
contig_1	Pyrodigal	gene	794471	795043	.	+	.	ID=GCA000144955_00741_gene;locus_tag=GCA000144955_00741;gene=hpf
contig_1	Pyrodigal	CDS	794471	795043	.	+	0	ID=GCA000144955_00741;Name=ribosome hibernation-promoting factor%2C HPF/YfiA family;locus_tag=GCA000144955_00741;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;Dbxref=GO:0005840,GO:0022627,GO:0043024,GO:0045182,GO:0045900;gene=hpf;Parent=GCA000144955_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_000617735.1,SO:0001217,UniParc:UPI0000054781,UniRef:UniRef100_Q2G055,UniRef:UniRef50_P28368,UniRef:UniRef90_Q2G055
contig_1	Pyrodigal	gene	795457	797988	.	+	.	ID=GCA000144955_00742_gene;locus_tag=GCA000144955_00742;gene=secA
contig_1	Pyrodigal	CDS	795457	797988	.	+	0	ID=GCA000144955_00742;Name=preprotein translocase subunit SecA;locus_tag=GCA000144955_00742;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0006886,GO:0008564,GO:0017038,GO:0031522,GO:0043952,GO:0046872,GO:0065002;gene=secA;Parent=GCA000144955_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,KEGG:K03070,RefSeq:WP_000506531.1,SO:0001217,UniParc:UPI000005226D,UniRef:UniRef100_O06446,UniRef:UniRef50_O06446,UniRef:UniRef90_O06446;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	798416	799411	.	+	.	ID=GCA000144955_00743_gene;locus_tag=GCA000144955_00743;gene=prfB
contig_1	Pyrodigal	CDS	798416	799411	.	+	0	ID=GCA000144955_00743;Name=peptide chain release factor 2;locus_tag=GCA000144955_00743;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149,GO:0075523;gene=prfB;Parent=GCA000144955_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1186,COG:J,KEGG:K02836,SO:0001217,UniParc:UPI0000054780,UniRef:UniRef100_Q2G052,UniRef:UniRef50_Q49VV3,UniRef:UniRef90_Q6GIN7
contig_1	Pyrodigal	gene	799820	800659	.	+	.	ID=GCA000144955_00744_gene;locus_tag=GCA000144955_00744
contig_1	Pyrodigal	CDS	799820	800659	.	+	0	ID=GCA000144955_00744;Name=putative autolysin LDP;locus_tag=GCA000144955_00744;product=putative autolysin LDP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000144955_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000749392.1,SO:0001217,UniParc:UPI0001DD9B91,UniRef:UniRef100_UPI0001DD9B91,UniRef:UniRef50_Q2G278,UniRef:UniRef90_Q2G278;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	800833	801483	.	+	.	ID=GCA000144955_00745_gene;locus_tag=GCA000144955_00745;gene=yfbR
contig_1	Pyrodigal	CDS	800833	801483	.	+	0	ID=GCA000144955_00745;Name=HD domain-containing protein;locus_tag=GCA000144955_00745;product=HD domain-containing protein;gene=yfbR;Parent=GCA000144955_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1896,COG:FR,RefSeq:WP_000538141.1,SO:0001217,UniParc:UPI00000D7871,UniRef:UniRef100_Q2G277,UniRef:UniRef50_A0A239ZXJ0,UniRef:UniRef90_A0A2K4AJY4
contig_1	Pyrodigal	gene	801480	801716	.	+	.	ID=GCA000144955_00746_gene;locus_tag=GCA000144955_00746;gene=csbA
contig_1	Pyrodigal	CDS	801480	801716	.	+	0	ID=GCA000144955_00746;Name=DUF2198 domain-containing protein;locus_tag=GCA000144955_00746;product=DUF2198 domain-containing protein;gene=csbA;Parent=GCA000144955_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4897,COG:S,RefSeq:WP_000638419.1,SO:0001217,UniParc:UPI000005477D,UniRef:UniRef100_Q2G051,UniRef:UniRef50_Q2G051,UniRef:UniRef90_Q2G051
contig_1	Pyrodigal	gene	801985	803970	.	+	.	ID=GCA000144955_00747_gene;locus_tag=GCA000144955_00747;gene=uvrB
contig_1	Pyrodigal	CDS	801985	803970	.	+	0	ID=GCA000144955_00747;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000144955_00747;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0005515,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016787,GO:0016887;gene=uvrB;Parent=GCA000144955_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,RefSeq:WP_000229249.1,SO:0001217,UniParc:UPI0001DD9B92,UniRef:UniRef100_UPI0001DD9B92,UniRef:UniRef50_P56981,UniRef:UniRef90_Q4L4I5;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	803978	806824	.	+	.	ID=GCA000144955_00748_gene;locus_tag=GCA000144955_00748;gene=uvrA
contig_1	Pyrodigal	CDS	803978	806824	.	+	0	ID=GCA000144955_00748;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000144955_00748;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0008270,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrA;Parent=GCA000144955_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_000662695.1,SO:0001217,UniParc:UPI0001DD9B93,UniRef:UniRef100_UPI0001DD9B93,UniRef:UniRef50_Q8F435,UniRef:UniRef90_P63382;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	807651	808916	.	+	.	ID=GCA000144955_00749_gene;locus_tag=GCA000144955_00749;gene=ltrA
contig_1	Pyrodigal	CDS	807651	808916	.	+	0	ID=GCA000144955_00749;Name=group II intron reverse transcriptase/maturase;locus_tag=GCA000144955_00749;product=group II intron reverse transcriptase/maturase;Dbxref=GO:0000373,GO:0003964;gene=ltrA;Parent=GCA000144955_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00986,SO:0001217,UniRef:UniRef50_A0A8G2HZ16,UniRef:UniRef90_A0A8G2HZ16;ec_number=2.7.7.49
contig_1	Pyrodigal	gene	809309	810382	.	+	.	ID=GCA000144955_00750_gene;locus_tag=GCA000144955_00750
contig_1	Pyrodigal	CDS	809309	810382	.	+	0	ID=GCA000144955_00750;Name=IS110 family transposase;locus_tag=GCA000144955_00750;product=IS110 family transposase;Dbxref=GO:0004803;Parent=GCA000144955_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_U6C1M0,UniRef:UniRef90_A0A3E0INL7
contig_1	Infernal	gene	810481	810766	.	+	.	ID=GCA000144955_00751_gene;locus_tag=GCA000144955_00751;gene=S35
contig_1	Infernal	ncRNA	810481	810766	4.1e-19	+	.	ID=GCA000144955_00751;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00751;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00751_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	810899	811831	.	+	.	ID=GCA000144955_00752_gene;locus_tag=GCA000144955_00752;gene=hprK
contig_1	Pyrodigal	CDS	810899	811831	.	+	0	ID=GCA000144955_00752;Name=HPr(Ser) kinase/phosphatase;locus_tag=GCA000144955_00752;product=HPr(Ser) kinase/phosphatase;Dbxref=GO:0000155,GO:0000160,GO:0000287,GO:0004674,GO:0004712,GO:0005524,GO:0006109;gene=hprK;Parent=GCA000144955_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1493,COG:T,KEGG:K06023,RefSeq:WP_000958224.1,SO:0001217,UniParc:UPI0000054778,UniRef:UniRef100_Q2G045,UniRef:UniRef50_O34483,UniRef:UniRef90_Q2G045;ec_number=2.7.4.-
contig_1	Pyrodigal	gene	811837	812676	.	+	.	ID=GCA000144955_00753_gene;locus_tag=GCA000144955_00753;gene=lgt
contig_1	Pyrodigal	CDS	811837	812676	.	+	0	ID=GCA000144955_00753;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000144955_00753;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0009249,GO:0016020,GO:0042158;gene=lgt;Parent=GCA000144955_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_000513298.1,SO:0001217,UniParc:UPI0001DD9B96,UniRef:UniRef100_UPI0001DD9B96,UniRef:UniRef50_Q2G044,UniRef:UniRef90_Q2G044;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	812684	813169	.	+	.	ID=GCA000144955_00754_gene;locus_tag=GCA000144955_00754
contig_1	Pyrodigal	CDS	812684	813169	.	+	0	ID=GCA000144955_00754;Name=Putative acetyltransferase SAR0816;locus_tag=GCA000144955_00754;product=Putative acetyltransferase SAR0816;Dbxref=GO:0016746;Parent=GCA000144955_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224798.1,SO:0001217,UniParc:UPI0001DD9B97,UniRef:UniRef100_UPI0001DD9B97,UniRef:UniRef50_Q5HHQ6,UniRef:UniRef90_Q6GIM9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	813177	814616	.	+	.	ID=GCA000144955_00755_gene;locus_tag=GCA000144955_00755
contig_1	Pyrodigal	CDS	813177	814616	.	+	0	ID=GCA000144955_00755;Name=Beta-barrel assembly-enhancing protease;locus_tag=GCA000144955_00755;product=Beta-barrel assembly-enhancing protease;Parent=GCA000144955_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000057562.1,SO:0001217,UniParc:UPI0001C33ADF,UniRef:UniRef100_A0A0U1MHB9,UniRef:UniRef50_A0A2T4LUS3,UniRef:UniRef90_A0A389NUI4
contig_1	Pyrodigal	gene	814683	815618	.	+	.	ID=GCA000144955_00756_gene;locus_tag=GCA000144955_00756;gene=trxB
contig_1	Pyrodigal	CDS	814683	815618	.	+	0	ID=GCA000144955_00756;Name=thioredoxin-disulfide reductase;locus_tag=GCA000144955_00756;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0005737,GO:0019430,GO:0071949;gene=trxB;Parent=GCA000144955_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K00384,RefSeq:WP_000134963.1,SO:0001217,UniParc:UPI0000054774,UniRef:UniRef100_Q5HHQ4,UniRef:UniRef50_P80880,UniRef:UniRef90_Q5HHQ4;ec_number=1.8.1.9
contig_1	Infernal	gene	815893	816124	.	+	.	ID=GCA000144955_00757_gene;locus_tag=GCA000144955_00757;gene=S35
contig_1	Infernal	ncRNA	815893	816124	3.7e-14	+	.	ID=GCA000144955_00757;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00757;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00757_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	816267	817178	.	+	.	ID=GCA000144955_00758_gene;locus_tag=GCA000144955_00758;gene=rapZ
contig_1	Pyrodigal	CDS	816267	817178	.	+	0	ID=GCA000144955_00758;Name=RNase adapter RapZ;locus_tag=GCA000144955_00758;product=RNase adapter RapZ;Dbxref=GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000144955_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_000369722.1,SO:0001217,UniParc:UPI000004740A,UniRef:UniRef100_Q2G039,UniRef:UniRef50_Q2G039,UniRef:UniRef90_Q2G039
contig_1	Pyrodigal	gene	817175	818170	.	+	.	ID=GCA000144955_00759_gene;locus_tag=GCA000144955_00759;gene=cofD
contig_1	Pyrodigal	CDS	817175	818170	.	+	0	ID=GCA000144955_00759;Name=Gluconeogenesis factor;locus_tag=GCA000144955_00759;product=Gluconeogenesis factor;gene=cofD;Parent=GCA000144955_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0391,COG:GH,RefSeq:WP_001248943.1,SO:0001217,UniParc:UPI000175C12D,UniRef:UniRef100_A0A0D1HJ33,UniRef:UniRef50_A0A0U1MHM9,UniRef:UniRef90_A0A0U1MHM9
contig_1	Pyrodigal	gene	818282	819226	.	+	.	ID=GCA000144955_00760_gene;locus_tag=GCA000144955_00760;gene=whiA
contig_1	Pyrodigal	CDS	818282	819226	.	+	0	ID=GCA000144955_00760;Name=DNA-binding protein WhiA;locus_tag=GCA000144955_00760;product=DNA-binding protein WhiA;Dbxref=GO:0003677,GO:0043937,GO:0051301;gene=whiA;Parent=GCA000144955_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1481,COG:K,RefSeq:WP_000006551.1,SO:0001217,UniParc:UPI000005476E,UniRef:UniRef100_Q2G037,UniRef:UniRef50_O06975,UniRef:UniRef90_Q2G037
contig_1	tRNAscan-SE	gene	819537	819608	.	-	.	ID=GCA000144955_00761_gene;locus_tag=GCA000144955_00761;gene=trnR;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	819537	819608	.	-	.	ID=GCA000144955_00761;Name=tRNA-Arg(ccg);locus_tag=GCA000144955_00761;product=tRNA-Arg(ccg);gene=trnR;pseudogene=unknown;anti_codon=ccg;amino_acid=Arg;Parent=GCA000144955_00761_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	819796	820383	.	+	.	ID=GCA000144955_00762_gene;locus_tag=GCA000144955_00762;gene=clpP
contig_1	Pyrodigal	CDS	819796	820383	.	+	0	ID=GCA000144955_00762;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA000144955_00762;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117;gene=clpP;Parent=GCA000144955_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_001049165.1,SO:0001217,UniParc:UPI000005476D,UniRef:UniRef100_Q2G036,UniRef:UniRef50_P80244,UniRef:UniRef90_Q2G036;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	820626	821528	.	-	.	ID=GCA000144955_00763_gene;locus_tag=GCA000144955_00763;gene=yfcH
contig_1	Pyrodigal	CDS	820626	821528	.	-	0	ID=GCA000144955_00763;Name=Epimerase family protein SAUSA300_0753;locus_tag=GCA000144955_00763;product=Epimerase family protein SAUSA300_0753;gene=yfcH;Parent=GCA000144955_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,RefSeq:WP_000816308.1,SO:0001217,UniParc:UPI0001DD9D4E,UniRef:UniRef100_UPI0001DD9D4E,UniRef:UniRef50_Q2G035,UniRef:UniRef90_Q2G035
contig_1	Infernal	gene	821677	821800	.	+	.	ID=GCA000144955_00764_gene;locus_tag=GCA000144955_00764;gene=rsaH
contig_1	Infernal	ncRNA	821677	821800	6.9e-21	+	.	ID=GCA000144955_00764;Name=RNA Staph. aureus H;locus_tag=GCA000144955_00764;gene=rsaH;product=RNA Staph. aureus H;Dbxref=RFAM:RF01821;Parent=GCA000144955_00764_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01821
contig_1	Pyrodigal	gene	822231	822860	.	+	.	ID=GCA000144955_00765_gene;locus_tag=GCA000144955_00765
contig_1	Pyrodigal	CDS	822231	822860	.	+	0	ID=GCA000144955_00765;Name=DUF4887 domain-containing protein;locus_tag=GCA000144955_00765;product=DUF4887 domain-containing protein;Parent=GCA000144955_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070828.1,SO:0001217,UniParc:UPI0001DD9D4F,UniRef:UniRef100_UPI0001DD9D4F,UniRef:UniRef50_Q2G034,UniRef:UniRef90_Q2G034
contig_1	Infernal	gene	823000	823212	.	+	.	ID=GCA000144955_00766_gene;locus_tag=GCA000144955_00766;gene=S35
contig_1	Infernal	ncRNA	823000	823212	7.4e-13	+	.	ID=GCA000144955_00766;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00766;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00766_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	823502	824515	.	+	.	ID=GCA000144955_00767_gene;locus_tag=GCA000144955_00767;gene=deoR
contig_1	Pyrodigal	CDS	823502	824515	.	+	0	ID=GCA000144955_00767;Name=Central glycolytic genes regulator;locus_tag=GCA000144955_00767;product=Central glycolytic genes regulator;gene=deoR;Parent=GCA000144955_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,RefSeq:WP_000654030.1,SO:0001217,UniParc:UPI00000D76A7,UniRef:UniRef100_Q2G033,UniRef:UniRef50_A0A7V7VIG1,UniRef:UniRef90_A0A7Z1N475
contig_1	Pyrodigal	gene	824568	825578	.	+	.	ID=GCA000144955_00768_gene;locus_tag=GCA000144955_00768;gene=gap
contig_1	Pyrodigal	CDS	824568	825578	.	+	0	ID=GCA000144955_00768;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000144955_00768;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000144955_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000279414.1,SO:0001217,UniParc:UPI000005229B,UniRef:UniRef100_Q5HHP5,UniRef:UniRef50_O52631,UniRef:UniRef90_Q5HQV4;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	825717	826907	.	+	.	ID=GCA000144955_00769_gene;locus_tag=GCA000144955_00769;gene=pgk
contig_1	Pyrodigal	CDS	825717	826907	.	+	0	ID=GCA000144955_00769;Name=Phosphoglycerate kinase;locus_tag=GCA000144955_00769;product=Phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA000144955_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_001074745.1,SO:0001217,UniParc:UPI0001DD9D50,UniRef:UniRef100_UPI0001DD9D50,UniRef:UniRef50_Q8Y4I2,UniRef:UniRef90_Q2G031;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	827029	827790	.	+	.	ID=GCA000144955_00770_gene;locus_tag=GCA000144955_00770;gene=tpiA
contig_1	Pyrodigal	CDS	827029	827790	.	+	0	ID=GCA000144955_00770;Name=triose-phosphate isomerase;locus_tag=GCA000144955_00770;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000144955_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,KEGG:K01803,RefSeq:WP_001260093.1,SO:0001217,UniParc:UPI0001DD9D51,UniRef:UniRef100_A0AAW9XGC9,UniRef:UniRef50_Q5XD48,UniRef:UniRef90_Q2G030;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	827793	829310	.	+	.	ID=GCA000144955_00771_gene;locus_tag=GCA000144955_00771;gene=gpmI
contig_1	Pyrodigal	CDS	827793	829310	.	+	0	ID=GCA000144955_00771;Name=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;locus_tag=GCA000144955_00771;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;Dbxref=GO:0005829,GO:0006007,GO:0006096,GO:0030145,GO:0046537;gene=gpmI;Parent=GCA000144955_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0696,COG:G,KEGG:K15633,RefSeq:WP_001085510.1,SO:0001217,UniParc:UPI0001DD9D52,UniRef:UniRef100_UPI0001DD9D52,UniRef:UniRef50_P64269,UniRef:UniRef90_P64269;ec_number=5.4.2.12
contig_1	Pyrodigal	gene	829440	830744	.	+	.	ID=GCA000144955_00772_gene;locus_tag=GCA000144955_00772;gene=eno
contig_1	Pyrodigal	CDS	829440	830744	.	+	0	ID=GCA000144955_00772;Name=phosphopyruvate hydratase;locus_tag=GCA000144955_00772;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000144955_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_001121762.1,SO:0001217,UniParc:UPI0001DD9D53,UniRef:UniRef100_UPI0001DD9D53,UniRef:UniRef50_Q97QS2,UniRef:UniRef90_O69174;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	831083	831541	.	+	.	ID=GCA000144955_00773_gene;locus_tag=GCA000144955_00773
contig_1	Pyrodigal	CDS	831083	831541	.	+	0	ID=GCA000144955_00773;Name=DUF2127 domain-containing protein;locus_tag=GCA000144955_00773;product=DUF2127 domain-containing protein;Parent=GCA000144955_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000785252.1,SO:0001217,UniParc:UPI00000D770D,UniRef:UniRef100_Q2G027,UniRef:UniRef50_Q2G027,UniRef:UniRef90_Q2G027
contig_1	Pyrodigal	gene	831608	831841	.	+	.	ID=GCA000144955_00774_gene;locus_tag=GCA000144955_00774;gene=secG
contig_1	Pyrodigal	CDS	831608	831841	.	+	0	ID=GCA000144955_00774;Name=preprotein translocase subunit SecG;locus_tag=GCA000144955_00774;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0043952,GO:0065002;gene=secG;Parent=GCA000144955_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_000556760.1,SO:0001217,UniParc:UPI00000D77CD,UniRef:UniRef100_Q2G026,UniRef:UniRef50_Q2G026,UniRef:UniRef90_Q2G026
contig_1	Pyrodigal	gene	831970	832710	.	+	.	ID=GCA000144955_00775_gene;locus_tag=GCA000144955_00775;gene=yvaK
contig_1	Pyrodigal	CDS	831970	832710	.	+	0	ID=GCA000144955_00775;Name=Carboxylesterase%2C putative;locus_tag=GCA000144955_00775;product=Carboxylesterase%2C putative;gene=yvaK;Parent=GCA000144955_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001165972.1,SO:0001217,UniParc:UPI0001DD9D54,UniRef:UniRef100_UPI0001DD9D54,UniRef:UniRef50_Q2G025,UniRef:UniRef90_Q2G025
contig_1	Pyrodigal	gene	832744	835116	.	+	.	ID=GCA000144955_00776_gene;locus_tag=GCA000144955_00776;gene=rnr
contig_1	Pyrodigal	CDS	832744	835116	.	+	0	ID=GCA000144955_00776;Name=ribonuclease R;locus_tag=GCA000144955_00776;product=ribonuclease R;Dbxref=GO:0003723,GO:0004518;gene=rnr;Parent=GCA000144955_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_001050024.1,SO:0001217,UniParc:UPI0001DD9D55,UniRef:UniRef100_UPI0001DD9D55,UniRef:UniRef50_O32231,UniRef:UniRef90_A0A7Z7QY34;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	835138	835602	.	+	.	ID=GCA000144955_00777_gene;locus_tag=GCA000144955_00777;gene=smpB
contig_1	Pyrodigal	CDS	835138	835602	.	+	0	ID=GCA000144955_00777;Name=SsrA-binding protein SmpB;locus_tag=GCA000144955_00777;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000144955_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_001085185.1,SO:0001217,UniParc:UPI000005475F,UniRef:UniRef100_Q2G023,UniRef:UniRef50_C4L5G5,UniRef:UniRef90_P66862
contig_1	Aragorn	gene	835693	836051	.	+	.	ID=GCA000144955_00778_gene;locus_tag=GCA000144955_00778;gene=ssrA
contig_1	Aragorn	tmRNA	835693	836051	.	+	.	ID=GCA000144955_00778;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000144955_00778;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=835786..835821;Parent=GCA000144955_00778_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	836566	837180	.	+	.	ID=GCA000144955_00779_gene;locus_tag=GCA000144955_00779
contig_1	Pyrodigal	CDS	836566	837180	.	+	0	ID=GCA000144955_00779;Name=Stage II sporulation protein M;locus_tag=GCA000144955_00779;product=Stage II sporulation protein M;Parent=GCA000144955_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06384,RefSeq:WP_000999095.1,SO:0001217,UniParc:UPI0001DD9D56,UniRef:UniRef100_UPI0001DD9D56,UniRef:UniRef50_A0A6A9GWE6,UniRef:UniRef90_A0A6A9GWE6
contig_1	Pyrodigal	gene	837466	838194	.	-	.	ID=GCA000144955_00780_gene;locus_tag=GCA000144955_00780
contig_1	Pyrodigal	CDS	837466	838194	.	-	0	ID=GCA000144955_00780;Name=DUF5067 domain-containing protein;locus_tag=GCA000144955_00780;product=DUF5067 domain-containing protein;Parent=GCA000144955_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532745.1,SO:0001217,UniParc:UPI0001DD9D57,UniRef:UniRef100_UPI0001DD9D57,UniRef:UniRef50_Q2G019,UniRef:UniRef90_Q2G019
contig_1	Pyrodigal	gene	838801	839322	.	+	.	ID=GCA000144955_00781_gene;locus_tag=GCA000144955_00781
contig_1	Pyrodigal	CDS	838801	839322	.	+	0	ID=GCA000144955_00781;Name=SMODS-associated and fused to various effectors domain-containing protein;locus_tag=GCA000144955_00781;product=SMODS-associated and fused to various effectors domain-containing protein;Parent=GCA000144955_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000608193.1,SO:0001217,UniParc:UPI0001DD9D58,UniRef:UniRef100_UPI0001DD9D58,UniRef:UniRef50_K9AW58,UniRef:UniRef90_Q2G017
contig_1	Pyrodigal	gene	839461	839991	.	+	.	ID=GCA000144955_00782_gene;locus_tag=GCA000144955_00782;gene=yhbS
contig_1	Pyrodigal	CDS	839461	839991	.	+	0	ID=GCA000144955_00782;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00782;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000144955_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001166032.1,SO:0001217,UniParc:UPI0001DD9D59,UniRef:UniRef100_UPI0001DD9D59,UniRef:UniRef50_Q2G016,UniRef:UniRef90_Q2G016
contig_1	Pyrodigal	gene	840254	843178	.	+	.	ID=GCA000144955_00783_gene;locus_tag=GCA000144955_00783;gene=clfA
contig_1	Pyrodigal	CDS	840254	843178	.	+	0	ID=GCA000144955_00783;Name=MSCRAMM family adhesin clumping factor ClfA;locus_tag=GCA000144955_00783;product=MSCRAMM family adhesin clumping factor ClfA;Dbxref=GO:0005576,GO:0007155;gene=clfA;Parent=GCA000144955_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001056328.1,SO:0001217,UniParc:UPI0001DD9D5A,UniRef:UniRef100_UPI0001DD9D5A,UniRef:UniRef50_Q2G015,UniRef:UniRef90_Q6GIK4
contig_1	Pyrodigal	gene	843399	844913	.	+	.	ID=GCA000144955_00784_gene;locus_tag=GCA000144955_00784;gene=vwb
contig_1	Pyrodigal	CDS	843399	844913	.	+	0	ID=GCA000144955_00784;Name=von Willebrand factor binding protein Vwb;locus_tag=GCA000144955_00784;product=von Willebrand factor binding protein Vwb;gene=vwb;Parent=GCA000144955_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791724.1,SO:0001217,UniParc:UPI0001DD9D5B,UniRef:UniRef100_UPI0001DD9D5B,UniRef:UniRef50_E2FZT0,UniRef:UniRef90_UPI000CD0B504
contig_1	Pyrodigal	gene	845264	846286	.	+	.	ID=GCA000144955_00785_gene;locus_tag=GCA000144955_00785;gene=emp
contig_1	Pyrodigal	CDS	845264	846286	.	+	0	ID=GCA000144955_00785;Name=extracellular matrix protein-binding adhesin Emp;locus_tag=GCA000144955_00785;product=extracellular matrix protein-binding adhesin Emp;Dbxref=GO:0009986;gene=emp;Parent=GCA000144955_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000727726,BlastRules:WP_000728056,BlastRules:WP_031788349,BlastRules:WP_047447833,RefSeq:WP_000727720.1,SO:0001217,UniParc:UPI0001DD9D5C,UniRef:UniRef100_UPI0001DD9D5C,UniRef:UniRef50_P0C6P1,UniRef:UniRef90_P0C6P1
contig_1	Pyrodigal	gene	846621	847142	.	+	.	ID=GCA000144955_00786_gene;locus_tag=GCA000144955_00786
contig_1	Pyrodigal	CDS	846621	847142	.	+	0	ID=GCA000144955_00786;Name=Extracellular matrix and plasma binding protein;locus_tag=GCA000144955_00786;product=Extracellular matrix and plasma binding protein;Parent=GCA000144955_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824463.1,SO:0001217,UniParc:UPI0001DD9D5D,UniRef:UniRef100_UPI0001DD9D5D,UniRef:UniRef50_Q2G011,UniRef:UniRef90_A0A7U7EY05
contig_1	Pyrodigal	gene	847483	848169	.	+	.	ID=GCA000144955_00787_gene;locus_tag=GCA000144955_00787;gene=nuc
contig_1	Pyrodigal	CDS	847483	848169	.	+	0	ID=GCA000144955_00787;Name=Thermonuclease;locus_tag=GCA000144955_00787;product=Thermonuclease;Dbxref=GO:0003676,GO:0005576,GO:0016894,GO:0046872;gene=nuc;Parent=GCA000144955_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,SO:0001217,UniRef:UniRef50_P00644,UniRef:UniRef90_P00644;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	848526	848726	.	+	.	ID=GCA000144955_00788_gene;locus_tag=GCA000144955_00788;gene=cspA
contig_1	Pyrodigal	CDS	848526	848726	.	+	0	ID=GCA000144955_00788;Name=Cold shock protein CspA;locus_tag=GCA000144955_00788;product=Cold shock protein CspA;gene=cspA;Parent=GCA000144955_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059082.1,SO:0001217,UniParc:UPI0000054751,UniRef:UniRef100_Q2G009,UniRef:UniRef50_A0A2X3Z2C5,UniRef:UniRef90_Q2G009
contig_1	Pyrodigal	gene	849220	849438	.	-	.	ID=GCA000144955_00789_gene;locus_tag=GCA000144955_00789
contig_1	Pyrodigal	CDS	849220	849438	.	-	0	ID=GCA000144955_00789;Name=hypothetical protein;locus_tag=GCA000144955_00789;product=hypothetical protein;Parent=GCA000144955_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000005876.1,SO:0001217,UniParc:UPI0001DD9D5F,UniRef:UniRef100_A0AAE8PBD0,UniRef:UniRef50_Q2G008,UniRef:UniRef90_Q2G008
contig_1	Pyrodigal	gene	849500	849784	.	-	.	ID=GCA000144955_00790_gene;locus_tag=GCA000144955_00790
contig_1	Pyrodigal	CDS	849500	849784	.	-	0	ID=GCA000144955_00790;Name=Phage protein;locus_tag=GCA000144955_00790;product=Phage protein;Parent=GCA000144955_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001004404.1,SO:0001217,UniParc:UPI0001DD9D60,UniRef:UniRef100_UPI0001DD9D60,UniRef:UniRef50_Q2G007,UniRef:UniRef90_Q2G007
contig_1	Pyrodigal	gene	849871	850440	.	-	.	ID=GCA000144955_00791_gene;locus_tag=GCA000144955_00791;gene=lnsA
contig_1	Pyrodigal	CDS	849871	850440	.	-	0	ID=GCA000144955_00791;Name=lipoprotein N-acylation protein LnsA;locus_tag=GCA000144955_00791;product=lipoprotein N-acylation protein LnsA;gene=lnsA;Parent=GCA000144955_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3863,COG:S,KEGG:K27957,RefSeq:WP_001106649.1,SO:0001217,UniParc:UPI0001C0BA68,UniRef:UniRef100_A0A8G2HYY2,UniRef:UniRef50_A0A1J3ZZ65,UniRef:UniRef90_Q2G006;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	850628	850816	.	-	.	ID=GCA000144955_00792_gene;locus_tag=GCA000144955_00792;gene=tsaT
contig_1	Pyrodigal	CDS	850628	850816	.	-	0	ID=GCA000144955_00792;Name=type II toxin-antitoxin system toxin TsaT;locus_tag=GCA000144955_00792;product=type II toxin-antitoxin system toxin TsaT;Dbxref=GO:0090729,GO:0110001;gene=tsaT;Parent=GCA000144955_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000052076.1,SO:0001217,UniParc:UPI00000D77FC,UniRef:UniRef100_A0A7Z7W171,UniRef:UniRef50_Q2G005,UniRef:UniRef90_Q2G005
contig_1	Pyrodigal	gene	850845	851105	.	-	.	ID=GCA000144955_00793_gene;locus_tag=GCA000144955_00793;gene=tsaA
contig_1	Pyrodigal	CDS	850845	851105	.	-	0	ID=GCA000144955_00793;Name=type II toxin-antitoxin system antitoxin TsaA;locus_tag=GCA000144955_00793;product=type II toxin-antitoxin system antitoxin TsaA;Dbxref=GO:0110001;gene=tsaA;Parent=GCA000144955_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001059691.1,SO:0001217,UniParc:UPI0001DD9D61,UniRef:UniRef100_UPI0001DD9D61,UniRef:UniRef50_Q2G004,UniRef:UniRef90_Q2G004
contig_1	Pyrodigal	gene	851446	851649	.	+	.	ID=GCA000144955_00794_gene;locus_tag=GCA000144955_00794;gene=yozE
contig_1	Pyrodigal	CDS	851446	851649	.	+	0	ID=GCA000144955_00794;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000144955_00794;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000144955_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145162.1,SO:0001217,UniParc:UPI0001DD9D62,UniRef:UniRef100_UPI0001DD9D62,UniRef:UniRef50_Q2G003,UniRef:UniRef90_Q2G003
contig_1	Pyrodigal	gene	851646	851882	.	-	.	ID=GCA000144955_00795_gene;locus_tag=GCA000144955_00795
contig_1	Pyrodigal	CDS	851646	851882	.	-	0	ID=GCA000144955_00795;Name=CobW/HypB/UreG nucleotide-binding domain-containing protein;locus_tag=GCA000144955_00795;product=CobW/HypB/UreG nucleotide-binding domain-containing protein;Parent=GCA000144955_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000368687.1,SO:0001217,UniParc:UPI00000D9D21,UniRef:UniRef100_Q2G1T2,UniRef:UniRef50_A0A9X4L8V2,UniRef:UniRef90_Q2G1T2
contig_1	Pyrodigal	gene	852107	852688	.	+	.	ID=GCA000144955_00796_gene;locus_tag=GCA000144955_00796;gene=phoE
contig_1	Pyrodigal	CDS	852107	852688	.	+	0	ID=GCA000144955_00796;Name=Phosphoglycerate mutase;locus_tag=GCA000144955_00796;product=Phosphoglycerate mutase;gene=phoE;Parent=GCA000144955_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_001140693.1,SO:0001217,UniParc:UPI00000CAA46,UniRef:UniRef100_A0A380E788,UniRef:UniRef50_A0A0E8GAD0,UniRef:UniRef90_A0A0E8GAD0
contig_1	Pyrodigal	gene	852761	853378	.	-	.	ID=GCA000144955_00797_gene;locus_tag=GCA000144955_00797;gene=argO
contig_1	Pyrodigal	CDS	852761	853378	.	-	0	ID=GCA000144955_00797;Name=Amino acid transporter;locus_tag=GCA000144955_00797;product=Amino acid transporter;gene=argO;Parent=GCA000144955_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1279,COG:E,KEGG:K06895,RefSeq:WP_000255556.1,SO:0001217,UniParc:UPI0001DD9D63,UniRef:UniRef100_UPI0001DD9D63,UniRef:UniRef50_Q2G1T0,UniRef:UniRef90_Q2G1T0
contig_1	Pyrodigal	gene	853533	854027	.	-	.	ID=GCA000144955_00798_gene;locus_tag=GCA000144955_00798
contig_1	Pyrodigal	CDS	853533	854027	.	-	0	ID=GCA000144955_00798;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00798;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000569884.1,SO:0001217,UniParc:UPI0000054749,UniRef:UniRef100_Q2G1T4,UniRef:UniRef50_Q2G1T4,UniRef:UniRef90_Q2G1T4
contig_1	Pyrodigal	gene	854426	854848	.	-	.	ID=GCA000144955_00799_gene;locus_tag=GCA000144955_00799;gene=osmC
contig_1	Pyrodigal	CDS	854426	854848	.	-	0	ID=GCA000144955_00799;Name=Organic hydroperoxide resistance protein-like;locus_tag=GCA000144955_00799;product=Organic hydroperoxide resistance protein-like;Dbxref=GO:0006979;gene=osmC;Parent=GCA000144955_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,KEGG:K04063,RefSeq:WP_000974460.1,SO:0001217,UniParc:UPI0000054748,UniRef:UniRef100_Q2G1T3,UniRef:UniRef50_Q49W40,UniRef:UniRef90_Q2G1T3;ec_number=1.11.1.28
contig_1	Pyrodigal	gene	854996	855712	.	+	.	ID=GCA000144955_00800_gene;locus_tag=GCA000144955_00800;gene=aroD
contig_1	Pyrodigal	CDS	854996	855712	.	+	0	ID=GCA000144955_00800;Name=3-dehydroquinate dehydratase;locus_tag=GCA000144955_00800;product=3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0008652,GO:0009073,GO:0009423,GO:0046279;gene=aroD;Parent=GCA000144955_00800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0710,COG:E,RefSeq:WP_000150014.1,SO:0001217,UniParc:UPI0001DD9D64,UniRef:UniRef100_UPI0001DD9D64,UniRef:UniRef50_Q6GII7,UniRef:UniRef90_Q6GII7;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	855795	856334	.	+	.	ID=GCA000144955_00801_gene;locus_tag=GCA000144955_00801;gene=nfnB
contig_1	Pyrodigal	CDS	855795	856334	.	+	0	ID=GCA000144955_00801;Name=Nitroreductase domain-containing protein;locus_tag=GCA000144955_00801;product=Nitroreductase domain-containing protein;gene=nfnB;Parent=GCA000144955_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000422904.1,SO:0001217,UniParc:UPI0001DD9D65,UniRef:UniRef100_UPI0001DD9D65,UniRef:UniRef50_Q2G001,UniRef:UniRef90_Q2G001
contig_1	Pyrodigal	gene	856484	856804	.	-	.	ID=GCA000144955_00802_gene;locus_tag=GCA000144955_00802;gene=trxA
contig_1	Pyrodigal	CDS	856484	856804	.	-	0	ID=GCA000144955_00802;Name=Putative thioredoxin or thiol-disulfide isomerase;locus_tag=GCA000144955_00802;product=Putative thioredoxin or thiol-disulfide isomerase;gene=trxA;Parent=GCA000144955_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_001147955.1,SO:0001217,UniParc:UPI00003B151D,UniRef:UniRef100_A0A7Z7QY14,UniRef:UniRef50_A0A0U1MGB8,UniRef:UniRef90_A0A0U1MGB8
contig_1	Pyrodigal	gene	856948	857304	.	+	.	ID=GCA000144955_00803_gene;locus_tag=GCA000144955_00803;gene=arsC
contig_1	Pyrodigal	CDS	856948	857304	.	+	0	ID=GCA000144955_00803;Name=Arsenate reductase;locus_tag=GCA000144955_00803;product=Arsenate reductase;gene=arsC;Parent=GCA000144955_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_000589549.1,SO:0001217,UniParc:UPI0000054744,UniRef:UniRef100_Q2FZZ9,UniRef:UniRef50_A0A1D4Q7A2,UniRef:UniRef90_A0AAE8TJ65
contig_1	Pyrodigal	gene	857462	857842	.	+	.	ID=GCA000144955_00804_gene;locus_tag=GCA000144955_00804;gene=gcvH
contig_1	Pyrodigal	CDS	857462	857842	.	+	0	ID=GCA000144955_00804;Name=glycine cleavage system protein GcvH;locus_tag=GCA000144955_00804;product=glycine cleavage system protein GcvH;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000144955_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000290491.1,SO:0001217,UniParc:UPI000012B33B,UniRef:UniRef100_P64213,UniRef:UniRef50_P64213,UniRef:UniRef90_P64213
contig_1	Pyrodigal	gene	857906	858019	.	+	.	ID=GCA000144955_00805_gene;locus_tag=GCA000144955_00805
contig_1	Pyrodigal	CDS	857906	858019	.	+	0	ID=GCA000144955_00805;Name=hypothetical protein;locus_tag=GCA000144955_00805;product=hypothetical protein;Parent=GCA000144955_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001528017,UniRef:UniRef100_A0A1D5ABV8,UniRef:UniRef50_A0AA40JLX0,UniRef:UniRef90_A0AA40JLX0
contig_1	Pyrodigal	gene	858021	858899	.	+	.	ID=GCA000144955_00806_gene;locus_tag=GCA000144955_00806
contig_1	Pyrodigal	CDS	858021	858899	.	+	0	ID=GCA000144955_00806;Name=DUF1963 domain-containing protein;locus_tag=GCA000144955_00806;product=DUF1963 domain-containing protein;Parent=GCA000144955_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000932226.1,SO:0001217,UniParc:UPI0001DD9D66,UniRef:UniRef100_UPI0001DD9D66,UniRef:UniRef50_Q2FZZ6,UniRef:UniRef90_Q2FZZ6
contig_1	Infernal	gene	859052	859319	.	+	.	ID=GCA000144955_00807_gene;locus_tag=GCA000144955_00807;gene=S35
contig_1	Infernal	ncRNA	859052	859319	6.2e-15	+	.	ID=GCA000144955_00807;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00807;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00807_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	859483	859872	.	+	.	ID=GCA000144955_00808_gene;locus_tag=GCA000144955_00808;gene=rnmV
contig_1	Pyrodigal	CDS	859483	859872	.	+	0	ID=GCA000144955_00808;Name=Toprim domain-containing protein;locus_tag=GCA000144955_00808;product=Toprim domain-containing protein;gene=rnmV;Parent=GCA000144955_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1658,COG:J,SO:0001217,UniParc:UPI0001C0BA6F,UniRef:UniRef100_A0A380E2K6,UniRef:UniRef50_A0A1E5LDX5,UniRef:UniRef90_Q2FZZ4
contig_1	Pyrodigal	gene	859865	860161	.	+	.	ID=GCA000144955_00809_gene;locus_tag=GCA000144955_00809
contig_1	Pyrodigal	CDS	859865	860161	.	+	0	ID=GCA000144955_00809;Name=Thioredoxin domain-containing protein;locus_tag=GCA000144955_00809;product=Thioredoxin domain-containing protein;Parent=GCA000144955_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065801.1,SO:0001217,UniParc:UPI000005473F,UniRef:UniRef100_Q2FZZ3,UniRef:UniRef50_Q2FZZ3,UniRef:UniRef90_Q2FZZ3
contig_1	Infernal	regulatory_region	860219	860322	3.5e-15	+	.	ID=BPGLLONNDN_166;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	860411	861436	.	+	.	ID=GCA000144955_00810_gene;locus_tag=GCA000144955_00810;gene=metN2
contig_1	Pyrodigal	CDS	860411	861436	.	+	0	ID=GCA000144955_00810;Name=Methionine import ATP-binding protein MetN 2;locus_tag=GCA000144955_00810;product=Methionine import ATP-binding protein MetN 2;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN2;Parent=GCA000144955_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000571213.1,SO:0001217,UniParc:UPI00006E3999,UniRef:UniRef100_A0A0D1JK42,UniRef:UniRef50_Q99VG8,UniRef:UniRef90_Q99VG8;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	861429	862124	.	+	.	ID=GCA000144955_00811_gene;locus_tag=GCA000144955_00811;gene=metP
contig_1	Pyrodigal	CDS	861429	862124	.	+	0	ID=GCA000144955_00811;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000144955_00811;product=ABC transmembrane type-1 domain-containing protein;gene=metP;Parent=GCA000144955_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000520233.1,SO:0001217,UniParc:UPI000005473C,UniRef:UniRef100_Q2FZZ1,UniRef:UniRef50_O32168,UniRef:UniRef90_Q2FZZ1
contig_1	Pyrodigal	gene	862142	862963	.	+	.	ID=GCA000144955_00812_gene;locus_tag=GCA000144955_00812;gene=nlpA
contig_1	Pyrodigal	CDS	862142	862963	.	+	0	ID=GCA000144955_00812;Name=Lipoprotein;locus_tag=GCA000144955_00812;product=Lipoprotein;gene=nlpA;Parent=GCA000144955_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_000732334.1,SO:0001217,UniParc:UPI00005FE370,UniRef:UniRef100_A0A6B5KXH1,UniRef:UniRef50_A0A380G8D6,UniRef:UniRef90_A0A0U1MGY2
contig_1	Pyrodigal	gene	863318	863512	.	+	.	ID=GCA000144955_00813_gene;locus_tag=GCA000144955_00813;gene=yjbJ
contig_1	Pyrodigal	CDS	863318	863512	.	+	0	ID=GCA000144955_00813;Name=UPF0337 protein SAR0874;locus_tag=GCA000144955_00813;product=UPF0337 protein SAR0874;gene=yjbJ;Parent=GCA000144955_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752917.1,SO:0001217,UniParc:UPI000005473A,UniRef:UniRef100_Q2FZY9,UniRef:UniRef50_Q2FZY9,UniRef:UniRef90_Q2FZY9
contig_1	Pyrodigal	gene	863746	864597	.	-	.	ID=GCA000144955_00814_gene;locus_tag=GCA000144955_00814;gene=popT
contig_1	Pyrodigal	CDS	863746	864597	.	-	0	ID=GCA000144955_00814;Name=Polyprenyl-phosphate transporter;locus_tag=GCA000144955_00814;product=Polyprenyl-phosphate transporter;Dbxref=GO:0005886,GO:0071555;gene=popT;Parent=GCA000144955_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2035,COG:M,KEGG:K08974,RefSeq:WP_001183854.1,SO:0001217,UniParc:UPI00000CAC9C,UniRef:UniRef100_A0A0B6XNW1,UniRef:UniRef50_Q2FZY8,UniRef:UniRef90_Q2FZY8
contig_1	Pyrodigal	gene	864925	865686	.	+	.	ID=GCA000144955_00815_gene;locus_tag=GCA000144955_00815;gene=sufC
contig_1	Pyrodigal	CDS	864925	865686	.	+	0	ID=GCA000144955_00815;Name=Fe-S cluster assembly ATPase SufC;locus_tag=GCA000144955_00815;product=Fe-S cluster assembly ATPase SufC;Dbxref=GO:0005524,GO:0016226;gene=sufC;Parent=GCA000144955_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0396,COG:O,RefSeq:WP_000168845.1,SO:0001217,UniParc:UPI0000054738,UniRef:UniRef100_Q2FZY7,UniRef:UniRef50_A0A1G4NXF9,UniRef:UniRef90_Q5HQQ2
contig_1	Pyrodigal	gene	865784	867091	.	+	.	ID=GCA000144955_00816_gene;locus_tag=GCA000144955_00816;gene=sufD
contig_1	Pyrodigal	CDS	865784	867091	.	+	0	ID=GCA000144955_00816;Name=Fe-S cluster assembly protein SufD;locus_tag=GCA000144955_00816;product=Fe-S cluster assembly protein SufD;Dbxref=GO:0016226;gene=sufD;Parent=GCA000144955_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,KEGG:K09015,RefSeq:WP_000205566.1,SO:0001217,UniParc:UPI0001DD9EF5,UniRef:UniRef100_UPI0001DD9EF5,UniRef:UniRef50_O32165,UniRef:UniRef90_Q2FZY6
contig_1	Pyrodigal	gene	867206	868447	.	+	.	ID=GCA000144955_00817_gene;locus_tag=GCA000144955_00817;gene=csd
contig_1	Pyrodigal	CDS	867206	868447	.	+	0	ID=GCA000144955_00817;Name=putative cysteine desulfurase;locus_tag=GCA000144955_00817;product=putative cysteine desulfurase;Dbxref=GO:0006534,GO:0030170,GO:0031071;gene=csd;Parent=GCA000144955_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0520,COG:E,SO:0001217,UniRef:UniRef50_O32164,UniRef:UniRef90_P63518;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	868437	868901	.	+	.	ID=GCA000144955_00818_gene;locus_tag=GCA000144955_00818;gene=sufU
contig_1	Pyrodigal	CDS	868437	868901	.	+	0	ID=GCA000144955_00818;Name=Fe-S cluster assembly sulfur transfer protein SufU;locus_tag=GCA000144955_00818;product=Fe-S cluster assembly sulfur transfer protein SufU;Dbxref=GO:0005198,GO:0016226;gene=sufU;Parent=GCA000144955_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_001010513.1,SO:0001217,UniParc:UPI0001DD9EF7,UniRef:UniRef100_UPI0001DD9EF7,UniRef:UniRef50_O32163,UniRef:UniRef90_Q2FZY4
contig_1	Pyrodigal	gene	869052	870449	.	+	.	ID=GCA000144955_00819_gene;locus_tag=GCA000144955_00819;gene=sufB
contig_1	Pyrodigal	CDS	869052	870449	.	+	0	ID=GCA000144955_00819;Name=Fe-S cluster assembly protein SufB;locus_tag=GCA000144955_00819;product=Fe-S cluster assembly protein SufB;Dbxref=GO:0016226;gene=sufB;Parent=GCA000144955_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,RefSeq:WP_001074405.1,SO:0001217,UniParc:UPI00000D7837,UniRef:UniRef100_Q2FZY3,UniRef:UniRef50_O32162,UniRef:UniRef90_Q2FZY3
contig_1	Pyrodigal	gene	870783	871097	.	-	.	ID=GCA000144955_00820_gene;locus_tag=GCA000144955_00820
contig_1	Pyrodigal	CDS	870783	871097	.	-	0	ID=GCA000144955_00820;Name=hypothetical protein;locus_tag=GCA000144955_00820;product=hypothetical protein;Parent=GCA000144955_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000274034.1,SO:0001217,UniParc:UPI0001DD9EF8,UniRef:UniRef100_UPI0001DD9EF8,UniRef:UniRef50_Q2FZY1,UniRef:UniRef90_Q2FZY1
contig_1	Pyrodigal	gene	871462	872502	.	+	.	ID=GCA000144955_00821_gene;locus_tag=GCA000144955_00821;gene=corB
contig_1	Pyrodigal	CDS	871462	872502	.	+	0	ID=GCA000144955_00821;Name=CNNM transmembrane domain-containing protein;locus_tag=GCA000144955_00821;product=CNNM transmembrane domain-containing protein;gene=corB;Parent=GCA000144955_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,RefSeq:WP_000582320.1,SO:0001217,UniParc:UPI0001DD9EF9,UniRef:UniRef100_UPI0001DD9EF9,UniRef:UniRef50_K0J4R5,UniRef:UniRef90_Q2FZY0
contig_1	Pyrodigal	gene	872516	873583	.	+	.	ID=GCA000144955_00822_gene;locus_tag=GCA000144955_00822;gene=yrpB
contig_1	Pyrodigal	CDS	872516	873583	.	+	0	ID=GCA000144955_00822;Name=putative nitronate monooxygenase;locus_tag=GCA000144955_00822;product=putative nitronate monooxygenase;Dbxref=GO:0000166,GO:0009636,GO:0018580;gene=yrpB;Parent=GCA000144955_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2070,COG:R,RefSeq:WP_000267246.1,SO:0001217,UniParc:UPI0001DD9EFA,UniRef:UniRef100_UPI0001DD9EFA,UniRef:UniRef50_Q2FZX9,UniRef:UniRef90_Q2FZX9;ec_number=1.13.12.-
contig_1	Pyrodigal	gene	874012	874860	.	+	.	ID=GCA000144955_00823_gene;locus_tag=GCA000144955_00823;gene=yecE
contig_1	Pyrodigal	CDS	874012	874860	.	+	0	ID=GCA000144955_00823;Name=Cytosolic protein;locus_tag=GCA000144955_00823;product=Cytosolic protein;gene=yecE;Parent=GCA000144955_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1801,COG:R,RefSeq:WP_000608128.1,SO:0001217,UniParc:UPI0001DD9EFB,UniRef:UniRef100_UPI0001DD9EFB,UniRef:UniRef50_A0A0A8JCS6,UniRef:UniRef90_A0A7U7PXU7
contig_1	Pyrodigal	gene	874873	875700	.	+	.	ID=GCA000144955_00824_gene;locus_tag=GCA000144955_00824;gene=tauE
contig_1	Pyrodigal	CDS	874873	875700	.	+	0	ID=GCA000144955_00824;Name=putative membrane transporter protein;locus_tag=GCA000144955_00824;product=putative membrane transporter protein;gene=tauE;Parent=GCA000144955_00824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000927620.1,SO:0001217,UniParc:UPI0001DD9EFC,UniRef:UniRef100_UPI0001DD9EFC,UniRef:UniRef50_A0A7U7PY32,UniRef:UniRef90_A0A7U7PY32
contig_1	Pyrodigal	gene	875727	877046	.	+	.	ID=GCA000144955_00825_gene;locus_tag=GCA000144955_00825;gene=ushA
contig_1	Pyrodigal	CDS	875727	877046	.	+	0	ID=GCA000144955_00825;Name=UDP-sugar hydrolase 5-nucleotidase;locus_tag=GCA000144955_00825;product=UDP-sugar hydrolase 5-nucleotidase;gene=ushA;Parent=GCA000144955_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_001241212.1,SO:0001217,UniParc:UPI0001DD9EFD,UniRef:UniRef100_UPI0001DD9EFD,UniRef:UniRef50_A0A2I7Y753,UniRef:UniRef90_A0A2I7Y753
contig_1	Pyrodigal	gene	877130	878047	.	+	.	ID=GCA000144955_00826_gene;locus_tag=GCA000144955_00826;gene=lipA
contig_1	Pyrodigal	CDS	877130	878047	.	+	0	ID=GCA000144955_00826;Name=lipoyl synthase;locus_tag=GCA000144955_00826;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000144955_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_000201875.1,SO:0001217,UniParc:UPI000012E6DB,UniRef:UniRef100_Q2FZX4,UniRef:UniRef50_Q2FZX4,UniRef:UniRef90_Q2FZX4;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	878177	878560	.	+	.	ID=GCA000144955_00827_gene;locus_tag=GCA000144955_00827;gene=yutD
contig_1	Pyrodigal	CDS	878177	878560	.	+	0	ID=GCA000144955_00827;Name=DUF1027 domain-containing protein;locus_tag=GCA000144955_00827;product=DUF1027 domain-containing protein;gene=yutD;Parent=GCA000144955_00827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4470,COG:S,RefSeq:WP_000598444.1,SO:0001217,UniParc:UPI00000D76FB,UniRef:UniRef100_Q2FZX3,UniRef:UniRef50_S2XM05,UniRef:UniRef90_Q2FZX3
contig_1	Pyrodigal	gene	878639	878905	.	-	.	ID=GCA000144955_00828_gene;locus_tag=GCA000144955_00828
contig_1	Pyrodigal	CDS	878639	878905	.	-	0	ID=GCA000144955_00828;Name=Cytosolic protein;locus_tag=GCA000144955_00828;product=Cytosolic protein;Parent=GCA000144955_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566646.1,SO:0001217,UniParc:UPI0001DD9EFE,UniRef:UniRef100_UPI0001DD9EFE,UniRef:UniRef50_Q2FZX2,UniRef:UniRef90_Q2FZX2
contig_1	Pyrodigal	gene	879003	879437	.	+	.	ID=GCA000144955_00829_gene;locus_tag=GCA000144955_00829;gene=yutE
contig_1	Pyrodigal	CDS	879003	879437	.	+	0	ID=GCA000144955_00829;Name=DUF86 domain-containing protein;locus_tag=GCA000144955_00829;product=DUF86 domain-containing protein;gene=yutE;Parent=GCA000144955_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2445,COG:R,RefSeq:WP_000273978.1,SO:0001217,UniParc:UPI0001DD9EFF,UniRef:UniRef100_UPI0001DD9EFF,UniRef:UniRef50_A0A077UTM6,UniRef:UniRef90_A0A077UTM6
contig_1	Pyrodigal	gene	879437	880216	.	+	.	ID=GCA000144955_00830_gene;locus_tag=GCA000144955_00830;gene=nagD
contig_1	Pyrodigal	CDS	879437	880216	.	+	0	ID=GCA000144955_00830;Name=Acid sugar phosphatase;locus_tag=GCA000144955_00830;product=Acid sugar phosphatase;Dbxref=GO:0005737,GO:0016791,GO:0046872;gene=nagD;Parent=GCA000144955_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0647,COG:F,RefSeq:WP_000816182.1,SO:0001217,UniParc:UPI00003B152A,UniRef:UniRef100_Q6GIF9,UniRef:UniRef50_Q2FZX0,UniRef:UniRef90_Q2FZX0;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	880249	881208	.	+	.	ID=GCA000144955_00831_gene;locus_tag=GCA000144955_00831;gene=ldhA
contig_1	Pyrodigal	CDS	880249	881208	.	+	0	ID=GCA000144955_00831;Name=Glyoxylate reductase;locus_tag=GCA000144955_00831;product=Glyoxylate reductase;gene=ldhA;Parent=GCA000144955_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000239143.1,SO:0001217,UniParc:UPI0001DD9F00,UniRef:UniRef100_UPI0001DD9F00,UniRef:UniRef50_A0A1W7ABE9,UniRef:UniRef90_A0A0U1MIE0
contig_1	Pyrodigal	gene	881620	881772	.	+	.	ID=GCA000144955_00832_gene;locus_tag=GCA000144955_00832;gene=dltX
contig_1	Pyrodigal	CDS	881620	881772	.	+	0	ID=GCA000144955_00832;Name=Teichoic acid D-Ala incorporation-associated protein DltX;locus_tag=GCA000144955_00832;product=Teichoic acid D-Ala incorporation-associated protein DltX;gene=dltX;Parent=GCA000144955_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000837752.1,SO:0001217,UniParc:UPI00000D78B3,UniRef:UniRef100_Q2FZW7,UniRef:UniRef50_Q2FZW7,UniRef:UniRef90_Q2FZW7
contig_1	Pyrodigal	gene	881788	883245	.	+	.	ID=GCA000144955_00833_gene;locus_tag=GCA000144955_00833;gene=dltA
contig_1	Pyrodigal	CDS	881788	883245	.	+	0	ID=GCA000144955_00833;Name=D-alanine--poly(phosphoribitol) ligase subunit DltA;locus_tag=GCA000144955_00833;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;Dbxref=GO:0005524,GO:0005737,GO:0019350,GO:0047473,GO:0070395;gene=dltA;Parent=GCA000144955_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1020,COG:Q,RefSeq:WP_000129645.1,SO:0001217,UniParc:UPI00003B152C,UniRef:UniRef100_Q6GIF6,UniRef:UniRef50_P68876,UniRef:UniRef90_P68876;ec_number=6.2.1.54
contig_1	Pyrodigal	gene	883242	884456	.	+	.	ID=GCA000144955_00834_gene;locus_tag=GCA000144955_00834;gene=dltB
contig_1	Pyrodigal	CDS	883242	884456	.	+	0	ID=GCA000144955_00834;Name=PG:teichoic acid D-alanyltransferase DltB;locus_tag=GCA000144955_00834;product=PG:teichoic acid D-alanyltransferase DltB;Dbxref=GO:0016746,GO:0070395;gene=dltB;Parent=GCA000144955_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000613541,COG:COG1696,COG:M,KEGG:K03739,RefSeq:WP_000613541.1,SO:0001217,UniParc:UPI000005471F,UniRef:UniRef100_Q2FZW5,UniRef:UniRef50_B9EAK7,UniRef:UniRef90_A0A7U7JTN1
contig_1	Pyrodigal	gene	884474	884710	.	+	.	ID=GCA000144955_00835_gene;locus_tag=GCA000144955_00835;gene=dltC
contig_1	Pyrodigal	CDS	884474	884710	.	+	0	ID=GCA000144955_00835;Name=D-alanine--poly(phosphoribitol) ligase subunit 2;locus_tag=GCA000144955_00835;product=D-alanine--poly(phosphoribitol) ligase subunit 2;Dbxref=GO:0005737,GO:0019350,GO:0036370,GO:0070395,GO:0071555;gene=dltC;Parent=GCA000144955_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000395692.1,SO:0001217,UniParc:UPI000005471E,UniRef:UniRef100_Q2FZW4,UniRef:UniRef50_P39579,UniRef:UniRef90_Q2FZW4;ec_number=6.1.1.13
contig_1	Pyrodigal	gene	884707	885882	.	+	.	ID=GCA000144955_00836_gene;locus_tag=GCA000144955_00836;gene=dltD
contig_1	Pyrodigal	CDS	884707	885882	.	+	0	ID=GCA000144955_00836;Name=D-alanyl-lipoteichoic acid biosynthesis protein DltD;locus_tag=GCA000144955_00836;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;Dbxref=GO:0005886,GO:0070394,GO:0070395;gene=dltD;Parent=GCA000144955_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3966,COG:M,KEGG:K03740,RefSeq:WP_000769416.1,SO:0001217,UniParc:UPI000005471C,UniRef:UniRef100_Q2FZW3,UniRef:UniRef50_Q2FZW3,UniRef:UniRef90_Q2FZW3
contig_1	Pyrodigal	gene	886145	886387	.	-	.	ID=GCA000144955_00837_gene;locus_tag=GCA000144955_00837;gene=nifU
contig_1	Pyrodigal	CDS	886145	886387	.	-	0	ID=GCA000144955_00837;Name=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;locus_tag=GCA000144955_00837;product=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;gene=nifU;Parent=GCA000144955_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0694,COG:O,RefSeq:WP_001141883.1,SO:0001217,UniParc:UPI000005471B,UniRef:UniRef100_Q2FZW2,UniRef:UniRef50_I0JQ31,UniRef:UniRef90_Q2FZW2
contig_1	Pyrodigal	gene	886488	886811	.	+	.	ID=GCA000144955_00838_gene;locus_tag=GCA000144955_00838;gene=yuzD
contig_1	Pyrodigal	CDS	886488	886811	.	+	0	ID=GCA000144955_00838;Name=Disulfide oxidoreductase;locus_tag=GCA000144955_00838;product=Disulfide oxidoreductase;gene=yuzD;Parent=GCA000144955_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4837,COG:O,RefSeq:WP_000401414.1,SO:0001217,UniParc:UPI00000D9D32,UniRef:UniRef100_Q2FZW1,UniRef:UniRef50_A0A0H3JTK4,UniRef:UniRef90_A0A0H3JTK4
contig_1	Pyrodigal	gene	886871	887935	.	-	.	ID=GCA000144955_00839_gene;locus_tag=GCA000144955_00839;gene=ndh
contig_1	Pyrodigal	CDS	886871	887935	.	-	0	ID=GCA000144955_00839;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000144955_00839;product=Type II NADH:quinone oxidoreductase;gene=ndh;Parent=GCA000144955_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000794020.1,SO:0001217,UniParc:UPI0000054719,UniRef:UniRef100_Q2FZW0,UniRef:UniRef50_A0A239ZU84,UniRef:UniRef90_A0A077UJH8
contig_1	Pyrodigal	gene	888252	888488	.	+	.	ID=GCA000144955_00840_gene;locus_tag=GCA000144955_00840;gene=yuzB
contig_1	Pyrodigal	CDS	888252	888488	.	+	0	ID=GCA000144955_00840;Name=UPF0349 protein SACOL0942;locus_tag=GCA000144955_00840;product=UPF0349 protein SACOL0942;gene=yuzB;Parent=GCA000144955_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4844,COG:S,RefSeq:WP_001068337.1,SO:0001217,UniParc:UPI0000054718,UniRef:UniRef100_Q2FZV9,UniRef:UniRef50_A4ISE9,UniRef:UniRef90_Q2FZV9
contig_1	Pyrodigal	gene	888501	888860	.	+	.	ID=GCA000144955_00841_gene;locus_tag=GCA000144955_00841;gene=iscA
contig_1	Pyrodigal	CDS	888501	888860	.	+	0	ID=GCA000144955_00841;Name=FeS cluster biogenesis domain-containing protein;locus_tag=GCA000144955_00841;product=FeS cluster biogenesis domain-containing protein;gene=iscA;Parent=GCA000144955_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_001143497.1,SO:0001217,UniParc:UPI0000054717,UniRef:UniRef100_Q2FZV8,UniRef:UniRef50_A0A810E529,UniRef:UniRef90_G5JHW3
contig_1	Pyrodigal	gene	889314	890522	.	+	.	ID=GCA000144955_00842_gene;locus_tag=GCA000144955_00842;gene=ndh
contig_1	Pyrodigal	CDS	889314	890522	.	+	0	ID=GCA000144955_00842;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000144955_00842;product=Type II NADH:quinone oxidoreductase;Dbxref=GO:0003955,GO:0005886,GO:0019646,GO:0050136;gene=ndh;Parent=GCA000144955_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000046076.1,SO:0001217,UniParc:UPI0000054716,UniRef:UniRef100_Q2FZV7,UniRef:UniRef50_Q2FZV7,UniRef:UniRef90_Q2FZV7;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	890653	892128	.	+	.	ID=GCA000144955_00843_gene;locus_tag=GCA000144955_00843;gene=pepB
contig_1	Pyrodigal	CDS	890653	892128	.	+	0	ID=GCA000144955_00843;Name=Leucyl aminopeptidase family protein;locus_tag=GCA000144955_00843;product=Leucyl aminopeptidase family protein;gene=pepB;Parent=GCA000144955_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_001009696.1,SO:0001217,UniParc:UPI0001DD9F01,UniRef:UniRef100_UPI0001DD9F01,UniRef:UniRef50_B9DIX2,UniRef:UniRef90_A0A0U1MHC9
contig_1	Pyrodigal	gene	892539	893855	.	+	.	ID=GCA000144955_00844_gene;locus_tag=GCA000144955_00844;gene=yuiF
contig_1	Pyrodigal	CDS	892539	893855	.	+	0	ID=GCA000144955_00844;Name=Na+/H+ antiporter family protein;locus_tag=GCA000144955_00844;product=Na+/H+ antiporter family protein;gene=yuiF;Parent=GCA000144955_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2056,COG:E,KEGG:K07084,RefSeq:WP_000606324.1,SO:0001217,UniParc:UPI00000D771F,UniRef:UniRef100_Q2FZV5,UniRef:UniRef50_Q2FZV5,UniRef:UniRef90_Q2FZV5
contig_1	Pyrodigal	gene	893874	894248	.	+	.	ID=GCA000144955_00845_gene;locus_tag=GCA000144955_00845;gene=paaI
contig_1	Pyrodigal	CDS	893874	894248	.	+	0	ID=GCA000144955_00845;Name=ComA operon protein 2;locus_tag=GCA000144955_00845;product=ComA operon protein 2;gene=paaI;Parent=GCA000144955_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000149298.1,SO:0001217,UniParc:UPI0001DD9F02,UniRef:UniRef100_UPI0001DD9F02,UniRef:UniRef50_A0A090LQF4,UniRef:UniRef90_A0A090LQF4
contig_1	Pyrodigal	gene	894304	895458	.	-	.	ID=GCA000144955_00846_gene;locus_tag=GCA000144955_00846;gene=ndh
contig_1	Pyrodigal	CDS	894304	895458	.	-	0	ID=GCA000144955_00846;Name=FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000144955_00846;product=FAD/NAD(P)-binding domain-containing protein;gene=ndh;Parent=GCA000144955_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000558760.1,SO:0001217,UniParc:UPI0001DD9F03,UniRef:UniRef100_UPI0001DD9F03,UniRef:UniRef50_Q2G2I0,UniRef:UniRef90_Q2G2I0
contig_1	Pyrodigal	gene	895722	896078	.	-	.	ID=GCA000144955_00847_gene;locus_tag=GCA000144955_00847;gene=mnhG1
contig_1	Pyrodigal	CDS	895722	896078	.	-	0	ID=GCA000144955_00847;Name=Na+/H+ antiporter Mnh1 subunit G;locus_tag=GCA000144955_00847;product=Na+/H+ antiporter Mnh1 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG1;Parent=GCA000144955_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000590451,COG:COG1320,COG:P,RefSeq:WP_000590451.1,SO:0001217,UniParc:UPI00000D7713,UniRef:UniRef100_Q2G2H9,UniRef:UniRef50_Q2G2H9,UniRef:UniRef90_Q2G2H9
contig_1	Pyrodigal	gene	896056	896349	.	-	.	ID=GCA000144955_00848_gene;locus_tag=GCA000144955_00848;gene=mnhF1
contig_1	Pyrodigal	CDS	896056	896349	.	-	0	ID=GCA000144955_00848;Name=Na+/H+ antiporter Mnh1 subunit F;locus_tag=GCA000144955_00848;product=Na+/H+ antiporter Mnh1 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF1;Parent=GCA000144955_00848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001016306,COG:COG2212,COG:P,RefSeq:WP_001016306.1,SO:0001217,UniParc:UPI00000522D3,UniRef:UniRef100_Q2G2H6,UniRef:UniRef50_Q2G2H6,UniRef:UniRef90_Q2G2H6
contig_1	Pyrodigal	gene	896349	896828	.	-	.	ID=GCA000144955_00849_gene;locus_tag=GCA000144955_00849;gene=mnhE1
contig_1	Pyrodigal	CDS	896349	896828	.	-	0	ID=GCA000144955_00849;Name=Na+/H+ antiporter Mnh1 subunit E;locus_tag=GCA000144955_00849;product=Na+/H+ antiporter Mnh1 subunit E;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhE1;Parent=GCA000144955_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000290674,COG:COG1863,COG:P,RefSeq:WP_000290674.1,SO:0001217,UniParc:UPI0000054228,UniRef:UniRef100_Q2G2H8,UniRef:UniRef50_Q2G2H8,UniRef:UniRef90_Q2G2H8
contig_1	Pyrodigal	gene	896830	898326	.	-	.	ID=GCA000144955_00850_gene;locus_tag=GCA000144955_00850;gene=mnhD1
contig_1	Pyrodigal	CDS	896830	898326	.	-	0	ID=GCA000144955_00850;Name=Na+/H+ antiporter Mnh1 subunit D;locus_tag=GCA000144955_00850;product=Na+/H+ antiporter Mnh1 subunit D;Dbxref=GO:0005886,GO:0006814,GO:0008137,GO:0015297,GO:0015386,GO:0042773;gene=mnhD1;Parent=GCA000144955_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000573077,COG:COG0651,COG:CP,RefSeq:WP_000573092.1,SO:0001217,UniParc:UPI0001DD9F04,UniRef:UniRef100_UPI0001DD9F04,UniRef:UniRef50_Q2G2H7,UniRef:UniRef90_Q2G2H7
contig_1	Pyrodigal	gene	898319	898660	.	-	.	ID=GCA000144955_00851_gene;locus_tag=GCA000144955_00851;gene=mnhC1
contig_1	Pyrodigal	CDS	898319	898660	.	-	0	ID=GCA000144955_00851;Name=Na+/H+ antiporter Mnh1 subunit C;locus_tag=GCA000144955_00851;product=Na+/H+ antiporter Mnh1 subunit C;Dbxref=GO:0005886,GO:0006812,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhC1;Parent=GCA000144955_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000402803,COG:COG1006,COG:P,RefSeq:WP_000402803.1,SO:0001217,UniParc:UPI00000D765F,UniRef:UniRef100_Q2FZV3,UniRef:UniRef50_O05260,UniRef:UniRef90_Q2FZV3
contig_1	Pyrodigal	gene	898660	899088	.	-	.	ID=GCA000144955_00852_gene;locus_tag=GCA000144955_00852;gene=mnhB1
contig_1	Pyrodigal	CDS	898660	899088	.	-	0	ID=GCA000144955_00852;Name=Na+/H+ antiporter Mnh1 subunit B;locus_tag=GCA000144955_00852;product=Na+/H+ antiporter Mnh1 subunit B;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhB1;Parent=GCA000144955_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081626,COG:COG2111,COG:P,RefSeq:WP_001081626.1,SO:0001217,UniParc:UPI0000054246,UniRef:UniRef100_Q2FZV2,UniRef:UniRef50_Q2FZV2,UniRef:UniRef90_Q2FZV2
contig_1	Pyrodigal	gene	899081	901486	.	-	.	ID=GCA000144955_00853_gene;locus_tag=GCA000144955_00853;gene=mnhA1
contig_1	Pyrodigal	CDS	899081	901486	.	-	0	ID=GCA000144955_00853;Name=Na+/H+ antiporter Mnh1 subunit A;locus_tag=GCA000144955_00853;product=Na+/H+ antiporter Mnh1 subunit A;Dbxref=GO:0005886,GO:0006814,GO:0015297,GO:0051139,GO:0098662,GO:1902600;gene=mnhA1;Parent=GCA000144955_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_042727539,COG:COG2111,COG:P,RefSeq:WP_000054607.1,SO:0001217,UniParc:UPI0001DD9F05,UniRef:UniRef100_UPI0001DD9F05,UniRef:UniRef50_Q9K2S2,UniRef:UniRef90_Q9ZNG6
contig_1	Pyrodigal	gene	901617	902000	.	-	.	ID=GCA000144955_00854_gene;locus_tag=GCA000144955_00854
contig_1	Pyrodigal	CDS	901617	902000	.	-	0	ID=GCA000144955_00854;Name=Kinase associated B family protein;locus_tag=GCA000144955_00854;product=Kinase associated B family protein;Parent=GCA000144955_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000781162.1,SO:0001217,UniParc:UPI00000D767F,UniRef:UniRef100_A0A7Z7W299,UniRef:UniRef50_A0A0M2NU22,UniRef:UniRef90_A0A380DMN1
contig_1	Pyrodigal	gene	902064	902657	.	+	.	ID=GCA000144955_00855_gene;locus_tag=GCA000144955_00855;gene=ppiB
contig_1	Pyrodigal	CDS	902064	902657	.	+	0	ID=GCA000144955_00855;Name=Putative peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000144955_00855;product=Putative peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0140839,GO:0140840;gene=ppiB;Parent=GCA000144955_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_000035058.1,SO:0001217,UniParc:UPI000005425D,UniRef:UniRef100_Q2FZU9,UniRef:UniRef50_Q2FZU9,UniRef:UniRef90_Q2FZU9;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	903073	903450	.	+	.	ID=GCA000144955_00856_gene;locus_tag=GCA000144955_00856;gene=ygs
contig_1	Pyrodigal	CDS	903073	903450	.	+	0	ID=GCA000144955_00856;Name=S1 domain-containing post-transcriptional regulator Ygs;locus_tag=GCA000144955_00856;product=S1 domain-containing post-transcriptional regulator Ygs;gene=ygs;Parent=GCA000144955_00856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1098,COG:R,RefSeq:WP_001067294.1,SO:0001217,UniParc:UPI00000D9D39,UniRef:UniRef100_A0A7Z7QY58,UniRef:UniRef50_B9DIU9,UniRef:UniRef90_A0A1L8Y4M2
contig_1	Pyrodigal	gene	903812	904939	.	+	.	ID=GCA000144955_00857_gene;locus_tag=GCA000144955_00857;gene=fadH
contig_1	Pyrodigal	CDS	903812	904939	.	+	0	ID=GCA000144955_00857;Name=Putative NADH-dependent flavin oxidoreductase YqiG;locus_tag=GCA000144955_00857;product=Putative NADH-dependent flavin oxidoreductase YqiG;gene=fadH;Parent=GCA000144955_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000838043.1,SO:0001217,UniParc:UPI0001DDA079,UniRef:UniRef100_UPI0001DDA079,UniRef:UniRef50_S2YL03,UniRef:UniRef90_A0A0U1MHF9
contig_1	Pyrodigal	gene	905247	906437	.	+	.	ID=GCA000144955_00858_gene;locus_tag=GCA000144955_00858;gene=rocD2
contig_1	Pyrodigal	CDS	905247	906437	.	+	0	ID=GCA000144955_00858;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000144955_00858;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0030170,GO:0042802,GO:0055129;gene=rocD2;Parent=GCA000144955_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,KEGG:K00819,RefSeq:WP_000167316.1,SO:0001217,UniParc:UPI0001C0BA9E,UniRef:UniRef100_A0A0D1JK95,UniRef:UniRef50_P38021,UniRef:UniRef90_Q49W96;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	906546	907790	.	+	.	ID=GCA000144955_00859_gene;locus_tag=GCA000144955_00859;gene=gluD
contig_1	Pyrodigal	CDS	906546	907790	.	+	0	ID=GCA000144955_00859;Name=NAD-specific glutamate dehydrogenase;locus_tag=GCA000144955_00859;product=NAD-specific glutamate dehydrogenase;Dbxref=GO:0004352,GO:0006520,GO:0006538;gene=gluD;Parent=GCA000144955_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_000138487.1,SO:0001217,UniParc:UPI00000D78A5,UniRef:UniRef100_Q5HHC7,UniRef:UniRef50_P39633,UniRef:UniRef90_Q5HHC7;ec_number=1.4.1.2
contig_1	Pyrodigal	gene	907931	908860	.	-	.	ID=GCA000144955_00860_gene;locus_tag=GCA000144955_00860;gene=ugpQ
contig_1	Pyrodigal	CDS	907931	908860	.	-	0	ID=GCA000144955_00860;Name=GP-PDE domain-containing protein;locus_tag=GCA000144955_00860;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000144955_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,RefSeq:WP_000185325.1,SO:0001217,UniParc:UPI0001DDA07A,UniRef:UniRef100_UPI0001DDA07A,UniRef:UniRef50_A0A380GA35,UniRef:UniRef90_Q2FZU3
contig_1	Pyrodigal	gene	909102	910481	.	-	.	ID=GCA000144955_00861_gene;locus_tag=GCA000144955_00861;gene=argH
contig_1	Pyrodigal	CDS	909102	910481	.	-	0	ID=GCA000144955_00861;Name=argininosuccinate lyase;locus_tag=GCA000144955_00861;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0042450;gene=argH;Parent=GCA000144955_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_000066053.1,SO:0001217,UniParc:UPI0000125F0D,UniRef:UniRef100_Q2FZU2,UniRef:UniRef50_P73257,UniRef:UniRef90_Q2FZU2;ec_number=4.3.2.1
contig_1	Pyrodigal	gene	910471	911676	.	-	.	ID=GCA000144955_00862_gene;locus_tag=GCA000144955_00862;gene=argG
contig_1	Pyrodigal	CDS	910471	911676	.	-	0	ID=GCA000144955_00862;Name=argininosuccinate synthase;locus_tag=GCA000144955_00862;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526;gene=argG;Parent=GCA000144955_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_000660045.1,SO:0001217,UniParc:UPI000012619A,UniRef:UniRef100_Q2FZU1,UniRef:UniRef50_A0RJM4,UniRef:UniRef90_Q2FZU1;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	912027	913358	.	+	.	ID=GCA000144955_00863_gene;locus_tag=GCA000144955_00863;gene=pgi
contig_1	Pyrodigal	CDS	912027	913358	.	+	0	ID=GCA000144955_00863;Name=glucose-6-phosphate isomerase;locus_tag=GCA000144955_00863;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000144955_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000148855.1,SO:0001217,UniParc:UPI000012AF6E,UniRef:UniRef100_Q2FIB3,UniRef:UniRef50_P13376,UniRef:UniRef90_Q2FIB3;ec_number=5.3.1.9
contig_1	Pyrodigal	gene	913671	914246	.	+	.	ID=GCA000144955_00864_gene;locus_tag=GCA000144955_00864;gene=tVP38
contig_1	Pyrodigal	CDS	913671	914246	.	+	0	ID=GCA000144955_00864;Name=Putative undecaprenyl phosphate transporter SAOUHSC_00901;locus_tag=GCA000144955_00864;product=Putative undecaprenyl phosphate transporter SAOUHSC_00901;Dbxref=GO:0005886;gene=tVP38;Parent=GCA000144955_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0398,COG:S,RefSeq:WP_000007965.1,SO:0001217,UniParc:UPI00005FE398,UniRef:UniRef100_A0A2S6D5L2,UniRef:UniRef50_Q2FZT9,UniRef:UniRef90_Q2FZT9
contig_1	Pyrodigal	gene	914251	914775	.	+	.	ID=GCA000144955_00865_gene;locus_tag=GCA000144955_00865;gene=lepB
contig_1	Pyrodigal	CDS	914251	914775	.	+	0	ID=GCA000144955_00865;Name=signal peptidase I;locus_tag=GCA000144955_00865;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000144955_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000758209.1,SO:0001217,UniParc:UPI000012E499,UniRef:UniRef100_P0A063,UniRef:UniRef50_P0A063,UniRef:UniRef90_P0A063;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	914791	915366	.	+	.	ID=GCA000144955_00866_gene;locus_tag=GCA000144955_00866;gene=lepB
contig_1	Pyrodigal	CDS	914791	915366	.	+	0	ID=GCA000144955_00866;Name=signal peptidase I;locus_tag=GCA000144955_00866;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000144955_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000711897.1,SO:0001217,UniParc:UPI00003B153B,UniRef:UniRef100_Q6GIC3,UniRef:UniRef50_Q5HHB9,UniRef:UniRef90_Q5HHB9;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	915526	919002	.	+	.	ID=GCA000144955_00867_gene;locus_tag=GCA000144955_00867;gene=addB
contig_1	Pyrodigal	CDS	915526	919002	.	+	0	ID=GCA000144955_00867;Name=helicase-exonuclease AddAB subunit AddB;locus_tag=GCA000144955_00867;product=helicase-exonuclease AddAB subunit AddB;Dbxref=GO:0000724,GO:0003690,GO:0004527,GO:0005524,GO:0008409,GO:0009378,GO:0036121,GO:0046872,GO:0051539,GO:0061749,GO:1990518;gene=addB;Parent=GCA000144955_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3857,COG:L,RefSeq:WP_000172357.1,SO:0001217,UniParc:UPI0001DDA07B,UniRef:UniRef100_UPI0001DDA07B,UniRef:UniRef50_Q2FZT6,UniRef:UniRef90_Q2FZT6;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	919003	922656	.	+	.	ID=GCA000144955_00868_gene;locus_tag=GCA000144955_00868;gene=addA
contig_1	Pyrodigal	CDS	919003	922656	.	+	0	ID=GCA000144955_00868;Name=helicase-exonuclease AddAB subunit AddA;locus_tag=GCA000144955_00868;product=helicase-exonuclease AddAB subunit AddA;Dbxref=GO:0000724,GO:0003678,GO:0003689,GO:0003690,GO:0005524,GO:0005829,GO:0006302,GO:0008408,GO:0009378,GO:0016818,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=addA;Parent=GCA000144955_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K16898,RefSeq:WP_000154939.1,SO:0001217,UniParc:UPI0001DDA07C,UniRef:UniRef100_UPI0001DDA07C,UniRef:UniRef50_Q4L4Y3,UniRef:UniRef90_Q2FZT5;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	922822	923724	.	+	.	ID=GCA000144955_00869_gene;locus_tag=GCA000144955_00869;gene=ycgM
contig_1	Pyrodigal	CDS	922822	923724	.	+	0	ID=GCA000144955_00869;Name=putative protein SAS0838;locus_tag=GCA000144955_00869;product=putative protein SAS0838;Dbxref=GO:0018773,GO:0046872;gene=ycgM;Parent=GCA000144955_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0179,COG:Q,RefSeq:WP_000670752.1,SO:0001217,UniParc:UPI0000054B26,UniRef:UniRef100_Q2FZT4,UniRef:UniRef50_Q2FZT4,UniRef:UniRef90_Q2FZT4
contig_1	Pyrodigal	gene	924051	924440	.	+	.	ID=GCA000144955_00870_gene;locus_tag=GCA000144955_00870
contig_1	Pyrodigal	CDS	924051	924440	.	+	0	ID=GCA000144955_00870;Name=UPF0344 protein MW0851;locus_tag=GCA000144955_00870;product=UPF0344 protein MW0851;Dbxref=GO:0005886;Parent=GCA000144955_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902814.1,SO:0001217,UniParc:UPI0001B3B2AF,UniRef:UniRef100_A0A0U1MH85,UniRef:UniRef50_Q2FZT3,UniRef:UniRef90_Q2FZT3
contig_1	Pyrodigal	gene	924556	926202	.	-	.	ID=GCA000144955_00871_gene;locus_tag=GCA000144955_00871;gene=tnp
contig_1	Pyrodigal	CDS	924556	926202	.	-	0	ID=GCA000144955_00871;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_00871;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277745.1,SO:0001217,UniParc:UPI0001DDA07D,UniRef:UniRef100_UPI0001DDA07D,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	926239	926476	.	+	.	ID=GCA000144955_00872_gene;locus_tag=GCA000144955_00872;gene=tsr24
contig_1	Infernal	ncRNA	926239	926476	4.7e-41	+	.	ID=GCA000144955_00872;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_00872;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_00872_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	926590	927906	.	-	.	ID=GCA000144955_00873_gene;locus_tag=GCA000144955_00873;gene=cdr
contig_1	Pyrodigal	CDS	926590	927906	.	-	0	ID=GCA000144955_00873;Name=CoA-disulfide reductase;locus_tag=GCA000144955_00873;product=CoA-disulfide reductase;Dbxref=GO:0003756,GO:0016491,GO:0045454,GO:0050451,GO:0050660,GO:0050661;gene=cdr;Parent=GCA000144955_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,KEGG:K08255,RefSeq:WP_001124498.1,SO:0001217,UniParc:UPI0001DDA07E,UniRef:UniRef100_UPI0001DDA07E,UniRef:UniRef50_O52582,UniRef:UniRef90_O52582;ec_number=1.8.1.14
contig_1	Pyrodigal	gene	927958	928782	.	-	.	ID=GCA000144955_00874_gene;locus_tag=GCA000144955_00874;gene=cof
contig_1	Pyrodigal	CDS	927958	928782	.	-	0	ID=GCA000144955_00874;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000144955_00874;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000144955_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_001182436.1,SO:0001217,UniParc:UPI000005227E,UniRef:UniRef100_Q2FZT1,UniRef:UniRef50_P70947,UniRef:UniRef90_Q2FZT1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	928896	929204	.	+	.	ID=GCA000144955_00875_gene;locus_tag=GCA000144955_00875;gene=sufT
contig_1	Pyrodigal	CDS	928896	929204	.	+	0	ID=GCA000144955_00875;Name=Fe-S protein maturation auxiliary factor SufT;locus_tag=GCA000144955_00875;product=Fe-S protein maturation auxiliary factor SufT;gene=sufT;Parent=GCA000144955_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2151,COG:O,RefSeq:WP_000390575.1,SO:0001217,UniParc:UPI00000D76BA,UniRef:UniRef100_A0A0H2XI17,UniRef:UniRef50_A0A0H2XI17,UniRef:UniRef90_A0A0H2XI17
contig_1	Pyrodigal	gene	929772	931586	.	+	.	ID=GCA000144955_00876_gene;locus_tag=GCA000144955_00876;gene=oafA
contig_1	Pyrodigal	CDS	929772	931586	.	+	0	ID=GCA000144955_00876;Name=Putative O-acetyltransferase MW0856;locus_tag=GCA000144955_00876;product=Putative O-acetyltransferase MW0856;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oafA;Parent=GCA000144955_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_001044236.1,SO:0001217,UniParc:UPI0001DDA07F,UniRef:UniRef100_UPI0001DDA07F,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q99VB6;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	931789	934398	.	+	.	ID=GCA000144955_00877_gene;locus_tag=GCA000144955_00877;gene=clpB
contig_1	Pyrodigal	CDS	931789	934398	.	+	0	ID=GCA000144955_00877;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000144955_00877;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005737,GO:0009408,GO:0042026;gene=clpB;Parent=GCA000144955_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000353949.1,SO:0001217,UniParc:UPI0001DDA080,UniRef:UniRef100_A0A5S9ETM4,UniRef:UniRef50_Q8CPT5,UniRef:UniRef90_G5JMB2
contig_1	Pyrodigal	gene	934457	935326	.	-	.	ID=GCA000144955_00878_gene;locus_tag=GCA000144955_00878;gene=lysR
contig_1	Pyrodigal	CDS	934457	935326	.	-	0	ID=GCA000144955_00878;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000144955_00878;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000144955_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001047073.1,SO:0001217,UniParc:UPI0001DDA081,UniRef:UniRef100_UPI0001DDA081,UniRef:UniRef50_Q2FZS7,UniRef:UniRef90_Q2FZS7
contig_1	Pyrodigal	gene	935457	935972	.	+	.	ID=GCA000144955_00879_gene;locus_tag=GCA000144955_00879;gene=ybhB
contig_1	Pyrodigal	CDS	935457	935972	.	+	0	ID=GCA000144955_00879;Name=YbhB/YbcL family Raf kinase inhibitor-like protein;locus_tag=GCA000144955_00879;product=YbhB/YbcL family Raf kinase inhibitor-like protein;gene=ybhB;Parent=GCA000144955_00879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1881,COG:R,RefSeq:WP_000695352.1,SO:0001217,UniParc:UPI0001DDA082,UniRef:UniRef100_UPI0001DDA082,UniRef:UniRef50_Q2FZS3,UniRef:UniRef90_Q2FZS3
contig_1	Pyrodigal	gene	936283	936717	.	+	.	ID=GCA000144955_00880_gene;locus_tag=GCA000144955_00880
contig_1	Pyrodigal	CDS	936283	936717	.	+	0	ID=GCA000144955_00880;Name=Cell surface like-protein Map-w;locus_tag=GCA000144955_00880;product=Cell surface like-protein Map-w;Parent=GCA000144955_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14204,RefSeq:WP_000769690.1,SO:0001217,UniParc:UPI00003B154A,UniRef:UniRef100_A0A7Z7W2A8,UniRef:UniRef50_A0A224B134,UniRef:UniRef90_A0AAE8P9X9
contig_1	Pyrodigal	gene	936974	937159	.	-	.	ID=GCA000144955_00881_gene;locus_tag=GCA000144955_00881
contig_1	Pyrodigal	CDS	936974	937159	.	-	0	ID=GCA000144955_00881;Name=DUF2929 domain-containing protein;locus_tag=GCA000144955_00881;product=DUF2929 domain-containing protein;Parent=GCA000144955_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000682089.1,SO:0001217,UniParc:UPI0000054B18,UniRef:UniRef100_Q2FZS1,UniRef:UniRef50_Q2FZS1,UniRef:UniRef90_Q2FZS1
contig_1	Pyrodigal	gene	937454	938395	.	+	.	ID=GCA000144955_00882_gene;locus_tag=GCA000144955_00882;gene=fabH
contig_1	Pyrodigal	CDS	937454	938395	.	+	0	ID=GCA000144955_00882;Name=Beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA000144955_00882;product=Beta-ketoacyl-[acyl-carrier-protein] synthase III;Dbxref=GO:0004315,GO:0005737,GO:0006633,GO:0033818;gene=fabH;Parent=GCA000144955_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0332,COG:I,RefSeq:WP_001100526.1,SO:0001217,UniParc:UPI00000CAB7F,UniRef:UniRef100_P68795,UniRef:UniRef50_P68795,UniRef:UniRef90_P68795;ec_number=2.3.1.180
contig_1	Pyrodigal	gene	938407	939651	.	+	.	ID=GCA000144955_00883_gene;locus_tag=GCA000144955_00883;gene=fabF
contig_1	Pyrodigal	CDS	938407	939651	.	+	0	ID=GCA000144955_00883;Name=beta-ketoacyl-ACP synthase II;locus_tag=GCA000144955_00883;product=beta-ketoacyl-ACP synthase II;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabF;Parent=GCA000144955_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_000081240.1,SO:0001217,UniParc:UPI0000054B16,UniRef:UniRef100_Q5HHA1,UniRef:UniRef50_O34340,UniRef:UniRef90_Q5HHA1;ec_number=2.3.1.179
contig_1	Pyrodigal	gene	939680	941326	.	-	.	ID=GCA000144955_00884_gene;locus_tag=GCA000144955_00884;gene=tnp
contig_1	Pyrodigal	CDS	939680	941326	.	-	0	ID=GCA000144955_00884;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_00884;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277713.1,SO:0001217,UniParc:UPI0001DDA083,UniRef:UniRef100_UPI0001DDA083,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	941363	941600	.	+	.	ID=GCA000144955_00885_gene;locus_tag=GCA000144955_00885;gene=tsr24
contig_1	Infernal	ncRNA	941363	941600	4.7e-41	+	.	ID=GCA000144955_00885;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_00885;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_00885_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	941678	942049	.	-	.	ID=GCA000144955_00886_gene;locus_tag=GCA000144955_00886
contig_1	Pyrodigal	CDS	941678	942049	.	-	0	ID=GCA000144955_00886;Name=DUF3899 domain-containing protein;locus_tag=GCA000144955_00886;product=DUF3899 domain-containing protein;Parent=GCA000144955_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000915158.1,SO:0001217,UniParc:UPI0001DDA084,UniRef:UniRef100_UPI0001DDA084,UniRef:UniRef50_Q2FZR8,UniRef:UniRef90_Q2FZR8
contig_1	Pyrodigal	gene	942292	943218	.	+	.	ID=GCA000144955_00887_gene;locus_tag=GCA000144955_00887;gene=opp3b
contig_1	Pyrodigal	CDS	942292	943218	.	+	0	ID=GCA000144955_00887;Name=oligopeptide ABC transporter permease;locus_tag=GCA000144955_00887;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3b;Parent=GCA000144955_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000521533.1,SO:0001217,UniParc:UPI0000054B14,UniRef:UniRef100_Q2FZR7,UniRef:UniRef50_Q2FZR7,UniRef:UniRef90_Q2FZR7
contig_1	Pyrodigal	gene	943218	944288	.	+	.	ID=GCA000144955_00888_gene;locus_tag=GCA000144955_00888;gene=opp3C
contig_1	Pyrodigal	CDS	943218	944288	.	+	0	ID=GCA000144955_00888;Name=oligopeptide ABC transporter permease;locus_tag=GCA000144955_00888;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3C;Parent=GCA000144955_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000829644.1,SO:0001217,UniParc:UPI0001DDA222,UniRef:UniRef100_UPI0001DDA222,UniRef:UniRef50_B9DIT6,UniRef:UniRef90_Q2FZR6
contig_1	Pyrodigal	gene	944304	945386	.	+	.	ID=GCA000144955_00889_gene;locus_tag=GCA000144955_00889;gene=dppD
contig_1	Pyrodigal	CDS	944304	945386	.	+	0	ID=GCA000144955_00889;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_00889;product=ABC transporter domain-containing protein;gene=dppD;Parent=GCA000144955_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000140050.1,SO:0001217,UniParc:UPI0000054B12,UniRef:UniRef100_Q2FZR5,UniRef:UniRef50_A0A1E9VQX6,UniRef:UniRef90_Q2FZR5
contig_1	Pyrodigal	gene	945376	946317	.	+	.	ID=GCA000144955_00890_gene;locus_tag=GCA000144955_00890;gene=oppF
contig_1	Pyrodigal	CDS	945376	946317	.	+	0	ID=GCA000144955_00890;Name=Oligopeptide transport ATP-binding protein oppF;locus_tag=GCA000144955_00890;product=Oligopeptide transport ATP-binding protein oppF;gene=oppF;Parent=GCA000144955_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000786748.1,SO:0001217,UniParc:UPI0001DDA223,UniRef:UniRef100_UPI0001DDA223,UniRef:UniRef50_A0A091C226,UniRef:UniRef90_A0A2X2MUC1
contig_1	Pyrodigal	gene	946336	947991	.	+	.	ID=GCA000144955_00891_gene;locus_tag=GCA000144955_00891;gene=oppA
contig_1	Pyrodigal	CDS	946336	947991	.	+	0	ID=GCA000144955_00891;Name=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;locus_tag=GCA000144955_00891;product=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;gene=oppA;Parent=GCA000144955_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_000197102.1,SO:0001217,UniParc:UPI0001DDA224,UniRef:UniRef100_UPI0001DDA224,UniRef:UniRef50_S2XM61,UniRef:UniRef90_A0A166IYH7
contig_1	Pyrodigal	gene	948193	949095	.	+	.	ID=GCA000144955_00892_gene;locus_tag=GCA000144955_00892;gene=opp3b
contig_1	Pyrodigal	CDS	948193	949095	.	+	0	ID=GCA000144955_00892;Name=oligopeptide ABC transporter permease;locus_tag=GCA000144955_00892;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3b;Parent=GCA000144955_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FZR7,UniRef:UniRef90_A0A7U7JTM3
contig_1	Pyrodigal	gene	949085	950104	.	+	.	ID=GCA000144955_00893_gene;locus_tag=GCA000144955_00893;gene=opp3C
contig_1	Pyrodigal	CDS	949085	950104	.	+	0	ID=GCA000144955_00893;Name=oligopeptide ABC transporter permease;locus_tag=GCA000144955_00893;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3C;Parent=GCA000144955_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000234064.1,SO:0001217,UniParc:UPI0001DDA226,UniRef:UniRef100_UPI0001DDA226,UniRef:UniRef50_B9DIT6,UniRef:UniRef90_A0A7U7JTX2
contig_1	Pyrodigal	gene	950117	951199	.	+	.	ID=GCA000144955_00894_gene;locus_tag=GCA000144955_00894
contig_1	Pyrodigal	CDS	950117	951199	.	+	0	ID=GCA000144955_00894;Name=Oligopeptide transport ATP-binding protein;locus_tag=GCA000144955_00894;product=Oligopeptide transport ATP-binding protein;Parent=GCA000144955_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000976732.1,SO:0001217,UniParc:UPI00031517CD,UniRef:UniRef100_UPI00031517CD,UniRef:UniRef50_A0A1E9VQX6,UniRef:UniRef90_A0A2S6DCY8
contig_1	Pyrodigal	gene	951189	952115	.	+	.	ID=GCA000144955_00895_gene;locus_tag=GCA000144955_00895
contig_1	Pyrodigal	CDS	951189	952115	.	+	0	ID=GCA000144955_00895;Name=Oligopeptide transport system ATP-binding protein;locus_tag=GCA000144955_00895;product=Oligopeptide transport system ATP-binding protein;Parent=GCA000144955_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001064122.1,SO:0001217,UniParc:UPI0001DDA228,UniRef:UniRef100_UPI0001DDA228,UniRef:UniRef50_K1MH09,UniRef:UniRef90_A0A2S6DQF1
contig_1	Pyrodigal	gene	952144	953766	.	+	.	ID=GCA000144955_00896_gene;locus_tag=GCA000144955_00896
contig_1	Pyrodigal	CDS	952144	953766	.	+	0	ID=GCA000144955_00896;Name=Oligopeptide ABC transporter;locus_tag=GCA000144955_00896;product=Oligopeptide ABC transporter;Parent=GCA000144955_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15580,RefSeq:WP_000703299.1,SO:0001217,UniParc:UPI0001DDA229,UniRef:UniRef100_UPI0001DDA229,UniRef:UniRef50_S2XM61,UniRef:UniRef90_A0A077UMS0
contig_1	Pyrodigal	gene	953886	954875	.	-	.	ID=GCA000144955_00897_gene;locus_tag=GCA000144955_00897;gene=trpS
contig_1	Pyrodigal	CDS	953886	954875	.	-	0	ID=GCA000144955_00897;Name=tryptophan--tRNA ligase;locus_tag=GCA000144955_00897;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0006436;gene=trpS;Parent=GCA000144955_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0180,COG:J,RefSeq:WP_000448934.1,SO:0001217,UniParc:UPI000002E8EF,UniRef:UniRef100_Q5HH88,UniRef:UniRef50_P21656,UniRef:UniRef90_Q5HH88;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	955169	955564	.	+	.	ID=GCA000144955_00898_gene;locus_tag=GCA000144955_00898;gene=spxA
contig_1	Pyrodigal	CDS	955169	955564	.	+	0	ID=GCA000144955_00898;Name=transcriptional regulator SpxA;locus_tag=GCA000144955_00898;product=transcriptional regulator SpxA;Dbxref=GO:0005737,GO:0045892;gene=spxA;Parent=GCA000144955_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,KEGG:K16509,RefSeq:WP_000258003.1,SO:0001217,UniParc:UPI00000D77A6,UniRef:UniRef100_Q2G1U6,UniRef:UniRef50_O31602,UniRef:UniRef90_Q2G1U6
contig_1	Pyrodigal	gene	955935	956654	.	+	.	ID=GCA000144955_00899_gene;locus_tag=GCA000144955_00899;gene=mecA
contig_1	Pyrodigal	CDS	955935	956654	.	+	0	ID=GCA000144955_00899;Name=adaptor protein MecA;locus_tag=GCA000144955_00899;product=adaptor protein MecA;Dbxref=GO:0030674;gene=mecA;Parent=GCA000144955_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4862,COG:KTN,RefSeq:WP_001217732.1,SO:0001217,UniParc:UPI0001DDA22A,UniRef:UniRef100_UPI0001DDA22A,UniRef:UniRef50_P60184,UniRef:UniRef90_P60184
contig_1	Pyrodigal	gene	956775	957761	.	+	.	ID=GCA000144955_00900_gene;locus_tag=GCA000144955_00900;gene=coiA
contig_1	Pyrodigal	CDS	956775	957761	.	+	0	ID=GCA000144955_00900;Name=Competence protein CoiA;locus_tag=GCA000144955_00900;product=Competence protein CoiA;gene=coiA;Parent=GCA000144955_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4469,COG:R,RefSeq:WP_000959290.1,SO:0001217,UniParc:UPI0001DDA22B,UniRef:UniRef100_UPI0001DDA22B,UniRef:UniRef50_Q2G1U4,UniRef:UniRef90_Q2G1U4
contig_1	Pyrodigal	gene	957809	959617	.	+	.	ID=GCA000144955_00901_gene;locus_tag=GCA000144955_00901;gene=pepF
contig_1	Pyrodigal	CDS	957809	959617	.	+	0	ID=GCA000144955_00901;Name=oligoendopeptidase F;locus_tag=GCA000144955_00901;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000144955_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000082737.1,SO:0001217,UniParc:UPI0001DDA22C,UniRef:UniRef100_UPI0001DDA22C,UniRef:UniRef50_O31605,UniRef:UniRef90_A0A0D1I4D2;ec_number=3.4.24.-
contig_1	Infernal	gene	959717	959814	.	+	.	ID=GCA000144955_00902_gene;locus_tag=GCA000144955_00902;gene=rsaE
contig_1	Infernal	ncRNA	959717	959814	1.1e-15	+	.	ID=GCA000144955_00902;Name=RNA Staph. aureus E (RoxS);locus_tag=GCA000144955_00902;gene=rsaE;product=RNA Staph. aureus E (RoxS);Dbxref=RFAM:RF01820;Parent=GCA000144955_00902_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01820
contig_1	Pyrodigal	gene	960077	960883	.	-	.	ID=GCA000144955_00903_gene;locus_tag=GCA000144955_00903;gene=yjbH
contig_1	Pyrodigal	CDS	960077	960883	.	-	0	ID=GCA000144955_00903;Name=protease adaptor protein YjbH;locus_tag=GCA000144955_00903;product=protease adaptor protein YjbH;Dbxref=GO:0005737;gene=yjbH;Parent=GCA000144955_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000896697,BlastRules:WP_014614367,COG:COG2761,COG:O,RefSeq:WP_000896698.1,SO:0001217,UniParc:UPI0001DDA22D,UniRef:UniRef100_UPI0001DDA22D,UniRef:UniRef50_Q2G203,UniRef:UniRef90_Q2G203
contig_1	Pyrodigal	gene	960906	961271	.	-	.	ID=GCA000144955_00904_gene;locus_tag=GCA000144955_00904;gene=yjbI
contig_1	Pyrodigal	CDS	960906	961271	.	-	0	ID=GCA000144955_00904;Name=truncated hemoglobin YjbI;locus_tag=GCA000144955_00904;product=truncated hemoglobin YjbI;gene=yjbI;Parent=GCA000144955_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000214067,BlastRules:WP_019167281,COG:COG2346,COG:P,RefSeq:WP_000214067.1,SO:0001217,UniParc:UPI00003B155A,UniRef:UniRef100_A0A7Z7W147,UniRef:UniRef50_Q2G202,UniRef:UniRef90_A0A2P7CBJ7
contig_1	Pyrodigal	gene	961375	961968	.	-	.	ID=GCA000144955_00905_gene;locus_tag=GCA000144955_00905;gene=yjbK
contig_1	Pyrodigal	CDS	961375	961968	.	-	0	ID=GCA000144955_00905;Name=CYTH domain-containing protein;locus_tag=GCA000144955_00905;product=CYTH domain-containing protein;gene=yjbK;Parent=GCA000144955_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4116,COG:R,RefSeq:WP_000224622.1,SO:0001217,UniParc:UPI0000054B02,UniRef:UniRef100_Q2G201,UniRef:UniRef50_Q2G201,UniRef:UniRef90_Q2G201
contig_1	Pyrodigal	gene	962154	962501	.	+	.	ID=GCA000144955_00906_gene;locus_tag=GCA000144955_00906
contig_1	Pyrodigal	CDS	962154	962501	.	+	0	ID=GCA000144955_00906;Name=UPF0738 protein SAS0874;locus_tag=GCA000144955_00906;product=UPF0738 protein SAS0874;Parent=GCA000144955_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001242107.1,SO:0001217,UniParc:UPI0001C0BAEB,UniRef:UniRef100_A0A0S3DZ24,UniRef:UniRef50_Q2G200,UniRef:UniRef90_Q2G200
contig_1	Pyrodigal	gene	962518	963153	.	+	.	ID=GCA000144955_00907_gene;locus_tag=GCA000144955_00907;gene=yjbM
contig_1	Pyrodigal	CDS	962518	963153	.	+	0	ID=GCA000144955_00907;Name=GTP pyrophosphokinase;locus_tag=GCA000144955_00907;product=GTP pyrophosphokinase;gene=yjbM;Parent=GCA000144955_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_001077683.1,SO:0001217,UniParc:UPI0000054B00,UniRef:UniRef100_Q2G204,UniRef:UniRef50_O31611,UniRef:UniRef90_A0A380G3W5
contig_1	Pyrodigal	gene	963170	963979	.	+	.	ID=GCA000144955_00908_gene;locus_tag=GCA000144955_00908;gene=nadK
contig_1	Pyrodigal	CDS	963170	963979	.	+	0	ID=GCA000144955_00908;Name=NAD kinase;locus_tag=GCA000144955_00908;product=NAD kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0019674,GO:0046872,GO:0051287;gene=nadK;Parent=GCA000144955_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_001270833.1,SO:0001217,UniParc:UPI0001DDA22E,UniRef:UniRef100_UPI0001DDA22E,UniRef:UniRef50_Q8Y8D7,UniRef:UniRef90_Q2G1Z9;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	963976	964830	.	+	.	ID=GCA000144955_00909_gene;locus_tag=GCA000144955_00909;gene=rluA
contig_1	Pyrodigal	CDS	963976	964830	.	+	0	ID=GCA000144955_00909;Name=Ribosomal large subunit pseudouridine synthase D;locus_tag=GCA000144955_00909;product=Ribosomal large subunit pseudouridine synthase D;gene=rluA;Parent=GCA000144955_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669930.1,SO:0001217,UniParc:UPI0001DDA22F,UniRef:UniRef100_UPI0001DDA22F,UniRef:UniRef50_A0A380CJ34,UniRef:UniRef90_A0A390AE29
contig_1	Pyrodigal	gene	964851	966236	.	+	.	ID=GCA000144955_00910_gene;locus_tag=GCA000144955_00910;gene=mgtE
contig_1	Pyrodigal	CDS	964851	966236	.	+	0	ID=GCA000144955_00910;Name=magnesium transporter;locus_tag=GCA000144955_00910;product=magnesium transporter;Dbxref=GO:0015095,GO:0015693,GO:0016020;gene=mgtE;Parent=GCA000144955_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2239,COG:P,RefSeq:WP_000062407.1,SO:0001217,UniParc:UPI00000D76B7,UniRef:UniRef100_A0A0D1GXI3,UniRef:UniRef50_A0A2T4SE99,UniRef:UniRef90_A0A0D1GXI3
contig_1	Pyrodigal	gene	966246	968090	.	+	.	ID=GCA000144955_00911_gene;locus_tag=GCA000144955_00911;gene=trkA
contig_1	Pyrodigal	CDS	966246	968090	.	+	0	ID=GCA000144955_00911;Name=Sodium:proton antiporter;locus_tag=GCA000144955_00911;product=Sodium:proton antiporter;gene=trkA;Parent=GCA000144955_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000395160.1,SO:0001217,UniParc:UPI0001DDA230,UniRef:UniRef100_UPI0001DDA230,UniRef:UniRef50_O31615,UniRef:UniRef90_Q2FZQ4
contig_1	Pyrodigal	gene	968368	969138	.	+	.	ID=GCA000144955_00912_gene;locus_tag=GCA000144955_00912;gene=fabI
contig_1	Pyrodigal	CDS	968368	969138	.	+	0	ID=GCA000144955_00912;Name=enoyl-ACP reductase FabI;locus_tag=GCA000144955_00912;product=enoyl-ACP reductase FabI;Dbxref=GO:0004318,GO:0006633,GO:0030497,GO:0042802,GO:0050661,GO:0141148;gene=fabI;Parent=GCA000144955_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_000933195.1,SO:0001217,UniParc:UPI00000D774F,UniRef:UniRef100_Q6GI75,UniRef:UniRef50_Q2FZQ3,UniRef:UniRef90_Q2FZQ3;ec_number=1.3.1.39
contig_1	Pyrodigal	gene	969335	970420	.	-	.	ID=GCA000144955_00913_gene;locus_tag=GCA000144955_00913;gene=perM
contig_1	Pyrodigal	CDS	969335	970420	.	-	0	ID=GCA000144955_00913;Name=AI-2E family transporter;locus_tag=GCA000144955_00913;product=AI-2E family transporter;gene=perM;Parent=GCA000144955_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000933109.1,SO:0001217,UniParc:UPI0001DDA231,UniRef:UniRef100_UPI0001DDA231,UniRef:UniRef50_Q2FZQ2,UniRef:UniRef90_Q2FZQ2
contig_1	Pyrodigal	gene	970762	972330	.	+	.	ID=GCA000144955_00914_gene;locus_tag=GCA000144955_00914;gene=alsT
contig_1	Pyrodigal	CDS	970762	972330	.	+	0	ID=GCA000144955_00914;Name=Alanine:cation symporter family protein;locus_tag=GCA000144955_00914;product=Alanine:cation symporter family protein;gene=alsT;Parent=GCA000144955_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000570695.1,SO:0001217,UniParc:UPI0001DDA232,UniRef:UniRef100_UPI0001DDA232,UniRef:UniRef50_A0A6N3F963,UniRef:UniRef90_Q2FZQ1
contig_1	Pyrodigal	gene	972474	973232	.	+	.	ID=GCA000144955_00915_gene;locus_tag=GCA000144955_00915;gene=fes
contig_1	Pyrodigal	CDS	972474	973232	.	+	0	ID=GCA000144955_00915;Name=Esterase family protein;locus_tag=GCA000144955_00915;product=Esterase family protein;gene=fes;Parent=GCA000144955_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2382,COG:P,RefSeq:WP_000889177.1,SO:0001217,UniParc:UPI0001DDA233,UniRef:UniRef100_A0A6B5HEC0,UniRef:UniRef50_Q2FZQ0,UniRef:UniRef90_Q2FZQ0
contig_1	Pyrodigal	gene	973426	973935	.	+	.	ID=GCA000144955_00916_gene;locus_tag=GCA000144955_00916;gene=thpR
contig_1	Pyrodigal	CDS	973426	973935	.	+	0	ID=GCA000144955_00916;Name=Putative phosphoesterase SA0873;locus_tag=GCA000144955_00916;product=Putative phosphoesterase SA0873;Dbxref=GO:0016788;gene=thpR;Parent=GCA000144955_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1514,COG:J,RefSeq:WP_000600387.1,SO:0001217,UniParc:UPI00000D77FD,UniRef:UniRef100_Q99V77,UniRef:UniRef50_Q2FZP9,UniRef:UniRef90_Q2FZP9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	974048	975238	.	-	.	ID=GCA000144955_00917_gene;locus_tag=GCA000144955_00917;gene=ltaA
contig_1	Pyrodigal	CDS	974048	975238	.	-	0	ID=GCA000144955_00917;Name=lipoteichoic acid biosynthesis MFS flippase LtaA;locus_tag=GCA000144955_00917;product=lipoteichoic acid biosynthesis MFS flippase LtaA;Dbxref=GO:0005886,GO:0006869,GO:0015297,GO:0070395,GO:0140327;gene=ltaA;Parent=GCA000144955_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001154229.1,SO:0001217,UniParc:UPI0001DDA234,UniRef:UniRef100_UPI0001DDA234,UniRef:UniRef50_Q2FZP8,UniRef:UniRef90_Q2FZP8
contig_1	Pyrodigal	gene	975216	976391	.	-	.	ID=GCA000144955_00918_gene;locus_tag=GCA000144955_00918;gene=ugtP
contig_1	Pyrodigal	CDS	975216	976391	.	-	0	ID=GCA000144955_00918;Name=diglucosyl diacylglycerol synthase;locus_tag=GCA000144955_00918;product=diglucosyl diacylglycerol synthase;Dbxref=GO:0005886,GO:0009246,GO:0009247,GO:0047228,GO:0070395;gene=ugtP;Parent=GCA000144955_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,RefSeq:WP_000258650.1,SO:0001217,UniParc:UPI0000054AF4,UniRef:UniRef100_Q2FZP7,UniRef:UniRef50_Q2FZP7,UniRef:UniRef90_Q2FZP7;ec_number=2.4.1.315
contig_1	Pyrodigal	gene	976823	978307	.	+	.	ID=GCA000144955_00919_gene;locus_tag=GCA000144955_00919;gene=murE
contig_1	Pyrodigal	CDS	976823	978307	.	+	0	ID=GCA000144955_00919;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;locus_tag=GCA000144955_00919;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0008360,GO:0009252,GO:0047482,GO:0051301,GO:0071555;gene=murE;Parent=GCA000144955_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_000340127.1,SO:0001217,UniParc:UPI0001C0BAEF,UniRef:UniRef100_A0A6B5EZQ3,UniRef:UniRef50_Q2FZP6,UniRef:UniRef90_Q2FZP6;ec_number=6.3.2.7
contig_1	Pyrodigal	gene	978297	978548	.	+	.	ID=GCA000144955_00920_gene;locus_tag=GCA000144955_00920
contig_1	Pyrodigal	CDS	978297	978548	.	+	0	ID=GCA000144955_00920;Name=YueH-like family protein;locus_tag=GCA000144955_00920;product=YueH-like family protein;Parent=GCA000144955_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000247588.1,SO:0001217,UniParc:UPI00005FE3BC,UniRef:UniRef100_A0A0D1GEN3,UniRef:UniRef50_Q2FZP5,UniRef:UniRef90_Q2FZP5
contig_1	Pyrodigal	gene	978548	980110	.	+	.	ID=GCA000144955_00921_gene;locus_tag=GCA000144955_00921;gene=prfC
contig_1	Pyrodigal	CDS	978548	980110	.	+	0	ID=GCA000144955_00921;Name=peptide chain release factor 3;locus_tag=GCA000144955_00921;product=peptide chain release factor 3;Dbxref=GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150;gene=prfC;Parent=GCA000144955_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_001049955.1,SO:0001217,UniParc:UPI0001DDA235,UniRef:UniRef100_UPI0001DDA235,UniRef:UniRef50_Q8Y8C0,UniRef:UniRef90_Q2FZP4
contig_1	Infernal	regulatory_region	980230	980337	4.3e-10	+	.	ID=BPGLLONNDN_179;Name=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);product=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);Dbxref=RFAM:RF00080;inference=profile:Rfam:RF00080;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	980412	981215	.	+	.	ID=GCA000144955_00922_gene;locus_tag=GCA000144955_00922;gene=terC
contig_1	Pyrodigal	CDS	980412	981215	.	+	0	ID=GCA000144955_00922;Name=TerC family protein;locus_tag=GCA000144955_00922;product=TerC family protein;gene=terC;Parent=GCA000144955_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_000928413.1,SO:0001217,UniParc:UPI00000CABC2,UniRef:UniRef100_Q2FZP3,UniRef:UniRef50_O34997,UniRef:UniRef90_Q2FZP3
contig_1	Pyrodigal	gene	981449	983758	.	+	.	ID=GCA000144955_00923_gene;locus_tag=GCA000144955_00923;gene=degQ
contig_1	Pyrodigal	CDS	981449	983758	.	+	0	ID=GCA000144955_00923;Name=Serine protease HtrA-like;locus_tag=GCA000144955_00923;product=Serine protease HtrA-like;Dbxref=GO:0004252,GO:0005886,GO:0006508;gene=degQ;Parent=GCA000144955_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,SO:0001217,UniRef:UniRef50_Q2FZP2,UniRef:UniRef90_Q2FZP2;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	983775	985133	.	+	.	ID=GCA000144955_00924_gene;locus_tag=GCA000144955_00924;gene=trkG
contig_1	Pyrodigal	CDS	983775	985133	.	+	0	ID=GCA000144955_00924;Name=K+-transporting ATPase;locus_tag=GCA000144955_00924;product=K+-transporting ATPase;gene=trkG;Parent=GCA000144955_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_000021865.1,SO:0001217,UniParc:UPI00000CAD19,UniRef:UniRef100_A0A2W3UG25,UniRef:UniRef50_O31658,UniRef:UniRef90_A0A7U7JTZ2
contig_1	Pyrodigal	gene	985269	986783	.	+	.	ID=GCA000144955_00925_gene;locus_tag=GCA000144955_00925;gene=ushA
contig_1	Pyrodigal	CDS	985269	986783	.	+	0	ID=GCA000144955_00925;Name=5'-Nucleotidase C-terminal domain-containing protein;locus_tag=GCA000144955_00925;product=5'-Nucleotidase C-terminal domain-containing protein;gene=ushA;Parent=GCA000144955_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,SO:0001217,UniParc:UPI0001DA21BD,UniRef:UniRef100_A0AAX2K318,UniRef:UniRef50_A0A380G340,UniRef:UniRef90_Q2FZP0
contig_1	tRNAscan-SE	gene	986967	987055	.	-	.	ID=GCA000144955_00926_gene;locus_tag=GCA000144955_00926;gene=trnS
contig_1	tRNAscan-SE	tRNA	986967	987055	.	-	.	ID=GCA000144955_00926;Name=tRNA-Ser(gct);locus_tag=GCA000144955_00926;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000144955_00926_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	987058	987132	.	-	.	ID=GCA000144955_00927_gene;locus_tag=GCA000144955_00927;gene=trnN
contig_1	tRNAscan-SE	tRNA	987058	987132	.	-	.	ID=GCA000144955_00927;Name=tRNA-Asn(gtt);locus_tag=GCA000144955_00927;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000144955_00927_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	987274	987843	.	-	.	ID=GCA000144955_00928_gene;locus_tag=GCA000144955_00928;gene=comK
contig_1	Pyrodigal	CDS	987274	987843	.	-	0	ID=GCA000144955_00928;Name=Competence protein ComK;locus_tag=GCA000144955_00928;product=Competence protein ComK;gene=comK;Parent=GCA000144955_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4903,COG:K,RefSeq:WP_000287262.1,SO:0001217,UniParc:UPI0001DDA3C3,UniRef:UniRef100_UPI0001DDA3C3,UniRef:UniRef50_Q2FZN9,UniRef:UniRef90_Q2FZN9
contig_1	Pyrodigal	gene	988052	988270	.	+	.	ID=GCA000144955_00929_gene;locus_tag=GCA000144955_00929
contig_1	Pyrodigal	CDS	988052	988270	.	+	0	ID=GCA000144955_00929;Name=IDEAL domain-containing protein;locus_tag=GCA000144955_00929;product=IDEAL domain-containing protein;Parent=GCA000144955_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000876828.1,SO:0001217,UniParc:UPI0001DDA3C4,UniRef:UniRef100_UPI0001DDA3C4,UniRef:UniRef50_Q2FZN8,UniRef:UniRef90_Q2FZN8
contig_1	Pyrodigal	gene	988351	989337	.	-	.	ID=GCA000144955_00930_gene;locus_tag=GCA000144955_00930;gene=lplA
contig_1	Pyrodigal	CDS	988351	989337	.	-	0	ID=GCA000144955_00930;Name=Lipoate--protein ligase 1;locus_tag=GCA000144955_00930;product=Lipoate--protein ligase 1;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000144955_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000668819.1,SO:0001217,UniParc:UPI0001DDA3C5,UniRef:UniRef100_UPI0001DDA3C5,UniRef:UniRef50_O07608,UniRef:UniRef90_A0A0H3JR16;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	989536	989712	.	+	.	ID=GCA000144955_00931_gene;locus_tag=GCA000144955_00931;gene=ykvS
contig_1	Pyrodigal	CDS	989536	989712	.	+	0	ID=GCA000144955_00931;Name=DUF2187 domain-containing protein;locus_tag=GCA000144955_00931;product=DUF2187 domain-containing protein;gene=ykvS;Parent=GCA000144955_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4873,COG:S,RefSeq:WP_000214898.1,SO:0001217,UniParc:UPI0000054AE8,UniRef:UniRef100_Q2FZN6,UniRef:UniRef50_Q2FZN6,UniRef:UniRef90_Q2FZN6
contig_1	Pyrodigal	gene	989727	990329	.	+	.	ID=GCA000144955_00932_gene;locus_tag=GCA000144955_00932
contig_1	Pyrodigal	CDS	989727	990329	.	+	0	ID=GCA000144955_00932;Name=CPBP family intramembrane metalloprotease;locus_tag=GCA000144955_00932;product=CPBP family intramembrane metalloprotease;Parent=GCA000144955_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033863.1,SO:0001217,UniParc:UPI0001DDA3C6,UniRef:UniRef100_UPI0001DDA3C6,UniRef:UniRef50_Q2FZN5,UniRef:UniRef90_Q2FZN5
contig_1	Pyrodigal	gene	991433	993397	.	+	.	ID=GCA000144955_00933_gene;locus_tag=GCA000144955_00933
contig_1	Pyrodigal	CDS	991433	993397	.	+	0	ID=GCA000144955_00933;Name=Bacteriocin-associated integral membrane family protein;locus_tag=GCA000144955_00933;product=Bacteriocin-associated integral membrane family protein;Parent=GCA000144955_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4652,COG:S,RefSeq:WP_000870812.1,SO:0001217,UniParc:UPI0001DDA3C8,UniRef:UniRef100_UPI0001DDA3C8,UniRef:UniRef50_Q2FZN2,UniRef:UniRef90_Q2FZN2
contig_1	Pyrodigal	gene	993400	993720	.	+	.	ID=GCA000144955_00934_gene;locus_tag=GCA000144955_00934;gene=yxeA
contig_1	Pyrodigal	CDS	993400	993720	.	+	0	ID=GCA000144955_00934;Name=YxeA family protein;locus_tag=GCA000144955_00934;product=YxeA family protein;gene=yxeA;Parent=GCA000144955_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000668628.1,SO:0001217,UniParc:UPI0001DA21C0,UniRef:UniRef100_A0A2S6D767,UniRef:UniRef50_G5JID0,UniRef:UniRef90_Q2FZN1
contig_1	Pyrodigal	gene	993717	994358	.	+	.	ID=GCA000144955_00935_gene;locus_tag=GCA000144955_00935;gene=lolD
contig_1	Pyrodigal	CDS	993717	994358	.	+	0	ID=GCA000144955_00935;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_00935;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000144955_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000571188.1,SO:0001217,UniParc:UPI0001DDA3C9,UniRef:UniRef100_UPI0001DDA3C9,UniRef:UniRef50_A0A390FES4,UniRef:UniRef90_A0A390FES4
contig_1	Pyrodigal	gene	994446	994691	.	-	.	ID=GCA000144955_00936_gene;locus_tag=GCA000144955_00936
contig_1	Pyrodigal	CDS	994446	994691	.	-	0	ID=GCA000144955_00936;Name=Membrane protein;locus_tag=GCA000144955_00936;product=Membrane protein;Parent=GCA000144955_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D76BD,UniRef:UniRef100_W8U039,UniRef:UniRef50_Q2FZM9,UniRef:UniRef90_Q2FZM9
contig_1	Pyrodigal	gene	995069	995356	.	+	.	ID=GCA000144955_00937_gene;locus_tag=GCA000144955_00937
contig_1	Pyrodigal	CDS	995069	995356	.	+	0	ID=GCA000144955_00937;Name=Phage protein;locus_tag=GCA000144955_00937;product=Phage protein;Parent=GCA000144955_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000410749.1,SO:0001217,UniParc:UPI00005FE3C4,UniRef:UniRef100_UPI00005FE3C4,UniRef:UniRef50_Q2FZM8,UniRef:UniRef90_A0A2S6D7D0
contig_1	Pyrodigal	gene	995362	996843	.	+	.	ID=GCA000144955_00938_gene;locus_tag=GCA000144955_00938;gene=tarM
contig_1	Pyrodigal	CDS	995362	996843	.	+	0	ID=GCA000144955_00938;Name=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;locus_tag=GCA000144955_00938;product=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0047269,GO:0071555;gene=tarM;Parent=GCA000144955_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000758645.1,SO:0001217,UniParc:UPI0001DDA3CA,UniRef:UniRef100_UPI0001DDA3CA,UniRef:UniRef50_A0A0H2WWV6,UniRef:UniRef90_A0A0H2WWV6;ec_number=2.4.1.70
contig_1	Pyrodigal	gene	996932	997288	.	-	.	ID=GCA000144955_00939_gene;locus_tag=GCA000144955_00939;gene=doxX
contig_1	Pyrodigal	CDS	996932	997288	.	-	0	ID=GCA000144955_00939;Name=DoxX family protein;locus_tag=GCA000144955_00939;product=DoxX family protein;gene=doxX;Parent=GCA000144955_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_000766009.1,SO:0001217,UniParc:UPI00000D77EC,UniRef:UniRef100_Q2FZM5,UniRef:UniRef50_Q2FZM5,UniRef:UniRef90_Q2FZM5
contig_1	Pyrodigal	gene	997776	998735	.	+	.	ID=GCA000144955_00940_gene;locus_tag=GCA000144955_00940;gene=fecB
contig_1	Pyrodigal	CDS	997776	998735	.	+	0	ID=GCA000144955_00940;Name=ABC transporter substrate-binding protein;locus_tag=GCA000144955_00940;product=ABC transporter substrate-binding protein;gene=fecB;Parent=GCA000144955_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,RefSeq:WP_001081339.1,SO:0001217,UniParc:UPI0001DDA3CB,UniRef:UniRef100_UPI0001DDA3CB,UniRef:UniRef50_W8URT6,UniRef:UniRef90_W8URT6
contig_1	Pyrodigal	gene	998780	998896	.	-	.	ID=GCA000144955_00941_gene;locus_tag=GCA000144955_00941
contig_1	Pyrodigal	CDS	998780	998896	.	-	0	ID=GCA000144955_00941;Name=SAR1012 family small protein;locus_tag=GCA000144955_00941;product=SAR1012 family small protein;Parent=GCA000144955_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9D5C,UniRef:UniRef100_A0A641A992,UniRef:UniRef50_Q2FZM3,UniRef:UniRef90_Q2FZM3
contig_1	Pyrodigal	gene	998975	999190	.	-	.	ID=GCA000144955_00942_gene;locus_tag=GCA000144955_00942;gene=tM2
contig_1	Pyrodigal	CDS	998975	999190	.	-	0	ID=GCA000144955_00942;Name=TM2 domain-containing protein;locus_tag=GCA000144955_00942;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000144955_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,RefSeq:WP_000867357.1,SO:0001217,UniParc:UPI00000D783B,UniRef:UniRef100_Q2FZM2,UniRef:UniRef50_Q2FZM2,UniRef:UniRef90_Q2FZM2
contig_1	Pyrodigal	gene	999355	999906	.	+	.	ID=GCA000144955_00943_gene;locus_tag=GCA000144955_00943;gene=rimI
contig_1	Pyrodigal	CDS	999355	999906	.	+	0	ID=GCA000144955_00943;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_00943;product=N-acetyltransferase domain-containing protein;gene=rimI;Parent=GCA000144955_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000620954.1,SO:0001217,UniParc:UPI0001DDA3CC,UniRef:UniRef100_UPI0001DDA3CC,UniRef:UniRef50_Q2FZM1,UniRef:UniRef90_Q2FZM1
contig_1	Pyrodigal	gene	999958	1000896	.	-	.	ID=GCA000144955_00944_gene;locus_tag=GCA000144955_00944;gene=menA
contig_1	Pyrodigal	CDS	999958	1000896	.	-	0	ID=GCA000144955_00944;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA000144955_00944;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;gene=menA;Parent=GCA000144955_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,RefSeq:WP_000070962.1,SO:0001217,UniParc:UPI0001DDA3CD,UniRef:UniRef100_UPI0001DDA3CD,UniRef:UniRef50_Q2FZM0,UniRef:UniRef90_Q2FZM0;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	1001078	1002439	.	+	.	ID=GCA000144955_00945_gene;locus_tag=GCA000144955_00945;gene=menF
contig_1	Pyrodigal	CDS	1001078	1002439	.	+	0	ID=GCA000144955_00945;Name=isochorismate synthase;locus_tag=GCA000144955_00945;product=isochorismate synthase;gene=menF;Parent=GCA000144955_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,SO:0001217,UniRef:UniRef50_A0A6K1LZM7,UniRef:UniRef90_A0A0D1HF04
contig_1	Pyrodigal	gene	1002426	1004099	.	+	.	ID=GCA000144955_00946_gene;locus_tag=GCA000144955_00946;gene=menD
contig_1	Pyrodigal	CDS	1002426	1004099	.	+	0	ID=GCA000144955_00946;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000144955_00946;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000144955_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_000526675.1,SO:0001217,UniParc:UPI0001DDA3CF,UniRef:UniRef100_A0A6B5FEL8,UniRef:UniRef50_Q8CPQ5,UniRef:UniRef90_Q2FZL7;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	1004086	1004889	.	+	.	ID=GCA000144955_00947_gene;locus_tag=GCA000144955_00947;gene=menH
contig_1	Pyrodigal	CDS	1004086	1004889	.	+	0	ID=GCA000144955_00947;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA000144955_00947;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA000144955_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000150218.1,SO:0001217,UniParc:UPI0001DDA3D0,UniRef:UniRef100_UPI0001DDA3D0,UniRef:UniRef50_A0A380H942,UniRef:UniRef90_A0A7Z7QY55;ec_number=4.2.99.20
contig_1	Pyrodigal	gene	1004882	1005703	.	+	.	ID=GCA000144955_00948_gene;locus_tag=GCA000144955_00948;gene=menB
contig_1	Pyrodigal	CDS	1004882	1005703	.	+	0	ID=GCA000144955_00948;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000144955_00948;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234;gene=menB;Parent=GCA000144955_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,KEGG:K01661,RefSeq:WP_000184952.1,SO:0001217,UniParc:UPI0001DDA3D1,UniRef:UniRef100_UPI0001DDA3D1,UniRef:UniRef50_Q5HH38,UniRef:UniRef90_Q5HH38;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	1005942	1006271	.	-	.	ID=GCA000144955_00949_gene;locus_tag=GCA000144955_00949;gene=sspC
contig_1	Pyrodigal	CDS	1005942	1006271	.	-	0	ID=GCA000144955_00949;Name=staphostatin B;locus_tag=GCA000144955_00949;product=staphostatin B;Dbxref=GO:0004869,GO:0005737;gene=sspC;Parent=GCA000144955_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000284457,KEGG:K23597,RefSeq:WP_000284459.1,SO:0001217,UniParc:UPI0001DDA3D2,UniRef:UniRef100_UPI0001DDA3D2,UniRef:UniRef50_Q9EYW6,UniRef:UniRef90_Q9EYW6
contig_1	Pyrodigal	gene	1006309	1007490	.	-	.	ID=GCA000144955_00950_gene;locus_tag=GCA000144955_00950;gene=sspB
contig_1	Pyrodigal	CDS	1006309	1007490	.	-	0	ID=GCA000144955_00950;Name=cysteine protease staphopain B;locus_tag=GCA000144955_00950;product=cysteine protease staphopain B;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=sspB;Parent=GCA000144955_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001088780,RefSeq:WP_001088786.1,SO:0001217,UniParc:UPI0001DDA3D3,UniRef:UniRef100_UPI0001DDA3D3,UniRef:UniRef50_Q2FZL3,UniRef:UniRef90_Q2FZL3;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	1007572	1008600	.	-	.	ID=GCA000144955_00951_gene;locus_tag=GCA000144955_00951;gene=sspA
contig_1	Pyrodigal	CDS	1007572	1008600	.	-	0	ID=GCA000144955_00951;Name=Glutamyl endopeptidase;locus_tag=GCA000144955_00951;product=Glutamyl endopeptidase;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=sspA;Parent=GCA000144955_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3591,COG:O,RefSeq:WP_000676526.1,SO:0001217,UniParc:UPI0001DDA3D4,UniRef:UniRef100_UPI0001DDA3D4,UniRef:UniRef50_Q2FZL2,UniRef:UniRef90_Q2FZL2;ec_number=3.4.21.19
contig_1	Pyrodigal	gene	1009128	1010282	.	-	.	ID=GCA000144955_00952_gene;locus_tag=GCA000144955_00952;gene=aspB
contig_1	Pyrodigal	CDS	1009128	1010282	.	-	0	ID=GCA000144955_00952;Name=Aminotransferase;locus_tag=GCA000144955_00952;product=Aminotransferase;gene=aspB;Parent=GCA000144955_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,KEGG:K00841,RefSeq:WP_000777586.1,SO:0001217,UniParc:UPI0001DDA3D5,UniRef:UniRef100_UPI0001DDA3D5,UniRef:UniRef50_Q4L550,UniRef:UniRef90_A0A0D6HV28;ec_number=2.6.1.-
contig_1	Pyrodigal	gene	1010478	1011488	.	-	.	ID=GCA000144955_00953_gene;locus_tag=GCA000144955_00953;gene=nolL
contig_1	Pyrodigal	CDS	1010478	1011488	.	-	0	ID=GCA000144955_00953;Name=Acyltransferase 3 domain-containing protein;locus_tag=GCA000144955_00953;product=Acyltransferase 3 domain-containing protein;gene=nolL;Parent=GCA000144955_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3594,COG:G,RefSeq:WP_000202435.1,SO:0001217,UniParc:UPI0001DDA3D6,UniRef:UniRef100_UPI0001DDA3D6,UniRef:UniRef50_Q2FZL0,UniRef:UniRef90_Q2FZL0
contig_1	Pyrodigal	gene	1011641	1012060	.	+	.	ID=GCA000144955_00954_gene;locus_tag=GCA000144955_00954;gene=marR
contig_1	Pyrodigal	CDS	1011641	1012060	.	+	0	ID=GCA000144955_00954;Name=Transcriptional regulator%2C MarR family%2C putative;locus_tag=GCA000144955_00954;product=Transcriptional regulator%2C MarR family%2C putative;gene=marR;Parent=GCA000144955_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000278015.1,SO:0001217,UniParc:UPI0000054B7D,UniRef:UniRef100_Q2FZK9,UniRef:UniRef50_Q2FZK9,UniRef:UniRef90_Q2FZK9
contig_1	Pyrodigal	gene	1012267	1016040	.	-	.	ID=GCA000144955_00955_gene;locus_tag=GCA000144955_00955;gene=atl
contig_1	Pyrodigal	CDS	1012267	1016040	.	-	0	ID=GCA000144955_00955;Name=Bifunctional autolysin;locus_tag=GCA000144955_00955;product=Bifunctional autolysin;Dbxref=GO:0004040,GO:0005576,GO:0008745,GO:0009253,GO:0033925,GO:0071555;gene=atl;Parent=GCA000144955_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5632,COG:M,RefSeq:WP_001074530.1,SO:0001217,UniParc:UPI0001DDA3D7,UniRef:UniRef100_UPI0001DDA3D7,UniRef:UniRef50_P0C5Z8,UniRef:UniRef90_P0C5Z8
contig_1	Pyrodigal	gene	1016268	1016702	.	-	.	ID=GCA000144955_00956_gene;locus_tag=GCA000144955_00956;gene=elaA
contig_1	Pyrodigal	CDS	1016268	1016702	.	-	0	ID=GCA000144955_00956;Name=Putative acetyltransferase MW0937;locus_tag=GCA000144955_00956;product=Putative acetyltransferase MW0937;Dbxref=GO:0004343,GO:0016747;gene=elaA;Parent=GCA000144955_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2153,COG:R,KEGG:K02348,RefSeq:WP_000491982.1,SO:0001217,UniParc:UPI0001DDA3D8,UniRef:UniRef100_UPI0001DDA3D8,UniRef:UniRef50_Q5HH30,UniRef:UniRef90_Q5HH30;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1016857	1017327	.	-	.	ID=GCA000144955_00957_gene;locus_tag=GCA000144955_00957
contig_1	Pyrodigal	CDS	1016857	1017327	.	-	0	ID=GCA000144955_00957;Name=osmotic stress response protein;locus_tag=GCA000144955_00957;product=osmotic stress response protein;Parent=GCA000144955_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000088431,RefSeq:WP_000088437.1,SO:0001217,UniParc:UPI00003B1580,UniRef:UniRef100_A0A0E1X6W4,UniRef:UniRef50_P0A0Q4,UniRef:UniRef90_P0A0Q4
contig_1	Pyrodigal	gene	1017375	1018601	.	-	.	ID=GCA000144955_00958_gene;locus_tag=GCA000144955_00958;gene=cps2a
contig_1	Pyrodigal	CDS	1017375	1018601	.	-	0	ID=GCA000144955_00958;Name=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;locus_tag=GCA000144955_00958;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;gene=cps2a;Parent=GCA000144955_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001031978,COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_001031982.1,SO:0001217,UniParc:UPI0001DDA3D9,UniRef:UniRef100_A0A6A9GY18,UniRef:UniRef50_P52078,UniRef:UniRef90_P52078;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1019050	1020243	.	+	.	ID=GCA000144955_00959_gene;locus_tag=GCA000144955_00959;gene=fmtA
contig_1	Pyrodigal	CDS	1019050	1020243	.	+	0	ID=GCA000144955_00959;Name=teichoic acid D-Ala esterase FmtA;locus_tag=GCA000144955_00959;product=teichoic acid D-Ala esterase FmtA;Dbxref=GO:0005886,GO:0016787,GO:0046677,GO:0071555;gene=fmtA;Parent=GCA000144955_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671243,COG:COG1680,COG:V,RefSeq:WP_000671262.1,SO:0001217,UniParc:UPI0001DDA3DA,UniRef:UniRef100_A0A6A9GVI3,UniRef:UniRef50_Q2FZK3,UniRef:UniRef90_Q2FZK3;ec_number=3.1.1.103
contig_1	Pyrodigal	gene	1020780	1021070	.	-	.	ID=GCA000144955_00960_gene;locus_tag=GCA000144955_00960;gene=qoxD
contig_1	Pyrodigal	CDS	1020780	1021070	.	-	0	ID=GCA000144955_00960;Name=cytochrome aa3 quinol oxidase subunit IV;locus_tag=GCA000144955_00960;product=cytochrome aa3 quinol oxidase subunit IV;Dbxref=GO:0005886,GO:0009319,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxD;Parent=GCA000144955_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3125,KEGG:K02829,SO:0001217,UniParc:UPI0000054B76,UniRef:UniRef100_Q2FZK2,UniRef:UniRef50_Q2FZK2,UniRef:UniRef90_Q2FZK2;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1021067	1021672	.	-	.	ID=GCA000144955_00961_gene;locus_tag=GCA000144955_00961;gene=qoxC
contig_1	Pyrodigal	CDS	1021067	1021672	.	-	0	ID=GCA000144955_00961;Name=cytochrome aa3 quinol oxidase subunit III;locus_tag=GCA000144955_00961;product=cytochrome aa3 quinol oxidase subunit III;Dbxref=GO:0004129,GO:0005886,GO:0009055,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxC;Parent=GCA000144955_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1845,RefSeq:WP_000017736.1,SO:0001217,UniParc:UPI0000054B75,UniRef:UniRef100_Q2FZK1,UniRef:UniRef50_P34958,UniRef:UniRef90_Q2FZK1;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1021662	1023650	.	-	.	ID=GCA000144955_00962_gene;locus_tag=GCA000144955_00962;gene=qoxB
contig_1	Pyrodigal	CDS	1021662	1023650	.	-	0	ID=GCA000144955_00962;Name=cytochrome aa3 quinol oxidase subunit I;locus_tag=GCA000144955_00962;product=cytochrome aa3 quinol oxidase subunit I;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0006119,GO:0015990,GO:0016020,GO:0016682,GO:0020037,GO:0022904;gene=qoxB;Parent=GCA000144955_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0843,KEGG:K02827,RefSeq:WP_001010762.1,SO:0001217,UniParc:UPI0000054B74,UniRef:UniRef100_Q2FZK0,UniRef:UniRef50_E0TW66,UniRef:UniRef90_Q2FZK0;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1023650	1024750	.	-	.	ID=GCA000144955_00963_gene;locus_tag=GCA000144955_00963;gene=qoxA
contig_1	Pyrodigal	CDS	1023650	1024750	.	-	0	ID=GCA000144955_00963;Name=cytochrome aa3 quinol oxidase subunit II;locus_tag=GCA000144955_00963;product=cytochrome aa3 quinol oxidase subunit II;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0042773;gene=qoxA;Parent=GCA000144955_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1622,KEGG:K02826,RefSeq:WP_000032836.1,SO:0001217,UniParc:UPI00000D7857,UniRef:UniRef100_Q2FZJ9,UniRef:UniRef50_Q2FZJ9,UniRef:UniRef90_Q2FZJ9;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1025323	1025640	.	-	.	ID=GCA000144955_00964_gene;locus_tag=GCA000144955_00964
contig_1	Pyrodigal	CDS	1025323	1025640	.	-	0	ID=GCA000144955_00964;Name=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;locus_tag=GCA000144955_00964;product=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;Parent=GCA000144955_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037831.1,SO:0001217,UniParc:UPI0000054B71,UniRef:UniRef100_Q2FZJ7,UniRef:UniRef50_Q2FZJ7,UniRef:UniRef90_Q2FZJ7
contig_1	Infernal	gene	1025967	1026237	.	+	.	ID=GCA000144955_00965_gene;locus_tag=GCA000144955_00965;gene=S35
contig_1	Infernal	ncRNA	1025967	1026237	2.3e-15	+	.	ID=GCA000144955_00965;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_00965;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_00965_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1026410	1027270	.	-	.	ID=GCA000144955_00966_gene;locus_tag=GCA000144955_00966;gene=folD
contig_1	Pyrodigal	CDS	1026410	1027270	.	-	0	ID=GCA000144955_00966;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA000144955_00966;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999;gene=folD;Parent=GCA000144955_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000225846.1,SO:0001217,UniParc:UPI00005FE3D9,UniRef:UniRef100_Q2YX11,UniRef:UniRef50_Q2FZJ6,UniRef:UniRef90_Q6GI21
contig_1	Pyrodigal	gene	1027471	1027953	.	+	.	ID=GCA000144955_00967_gene;locus_tag=GCA000144955_00967;gene=purE
contig_1	Pyrodigal	CDS	1027471	1027953	.	+	0	ID=GCA000144955_00967;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000144955_00967;product=N5-carboxyaminoimidazole ribonucleotide mutase;gene=purE;Parent=GCA000144955_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0041,COG:F,RefSeq:WP_044025873.1,SO:0001217,UniParc:UPI0002D5C31A,UniRef:UniRef100_UPI0002D5C31A,UniRef:UniRef50_P43849,UniRef:UniRef90_Q2FZJ5
contig_1	Pyrodigal	gene	1027940	1029064	.	+	.	ID=GCA000144955_00968_gene;locus_tag=GCA000144955_00968;gene=purK
contig_1	Pyrodigal	CDS	1027940	1029064	.	+	0	ID=GCA000144955_00968;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000144955_00968;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000144955_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0026,COG:F,RefSeq:WP_001010398.1,SO:0001217,UniParc:UPI0001DDA580,UniRef:UniRef100_UPI0001DDA580,UniRef:UniRef50_Q49WI9,UniRef:UniRef90_Q99V32;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	1029068	1029772	.	+	.	ID=GCA000144955_00969_gene;locus_tag=GCA000144955_00969;gene=purC
contig_1	Pyrodigal	CDS	1029068	1029772	.	+	0	ID=GCA000144955_00969;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000144955_00969;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0006164,GO:0006189,GO:0009236;gene=purC;Parent=GCA000144955_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0152,COG:F,RefSeq:WP_000174054.1,SO:0001217,UniParc:UPI0001DDA581,UniRef:UniRef100_UPI0001DDA581,UniRef:UniRef50_Q81IQ6,UniRef:UniRef90_Q2FZJ3;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	1029772	1030035	.	+	.	ID=GCA000144955_00970_gene;locus_tag=GCA000144955_00970;gene=purS
contig_1	Pyrodigal	CDS	1029772	1030035	.	+	0	ID=GCA000144955_00970;Name=phosphoribosylformylglycinamidine synthase subunit PurS;locus_tag=GCA000144955_00970;product=phosphoribosylformylglycinamidine synthase subunit PurS;gene=purS;Parent=GCA000144955_00970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1828,COG:F,RefSeq:WP_000848350.1,SO:0001217,UniParc:UPI0000054B6B,UniRef:UniRef100_Q2FZJ2,UniRef:UniRef50_A0A239ZQS9,UniRef:UniRef90_Q2FZJ2;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1030037	1030708	.	+	.	ID=GCA000144955_00971_gene;locus_tag=GCA000144955_00971;gene=purQ
contig_1	Pyrodigal	CDS	1030037	1030708	.	+	0	ID=GCA000144955_00971;Name=phosphoribosylformylglycinamidine synthase I;locus_tag=GCA000144955_00971;product=phosphoribosylformylglycinamidine synthase I;Dbxref=GO:0004359,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purQ;Parent=GCA000144955_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0047,COG:F,RefSeq:WP_000666797.1,SO:0001217,UniParc:UPI0001DDA582,UniRef:UniRef100_A0A0U1MJK0,UniRef:UniRef50_P12041,UniRef:UniRef90_Q2FZJ1;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1030701	1032890	.	+	.	ID=GCA000144955_00972_gene;locus_tag=GCA000144955_00972;gene=purL
contig_1	Pyrodigal	CDS	1030701	1032890	.	+	0	ID=GCA000144955_00972;Name=phosphoribosylformylglycinamidine synthase subunit PurL;locus_tag=GCA000144955_00972;product=phosphoribosylformylglycinamidine synthase subunit PurL;Dbxref=GO:0000287,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purL;Parent=GCA000144955_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0046,COG:F,KEGG:K23269,RefSeq:WP_000032742.1,SO:0001217,UniParc:UPI0001DDA583,UniRef:UniRef100_UPI0001DDA583,UniRef:UniRef50_Q2FZJ0,UniRef:UniRef90_Q2FZJ0;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1032869	1034353	.	+	.	ID=GCA000144955_00973_gene;locus_tag=GCA000144955_00973;gene=purF
contig_1	Pyrodigal	CDS	1032869	1034353	.	+	0	ID=GCA000144955_00973;Name=amidophosphoribosyltransferase;locus_tag=GCA000144955_00973;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0006189,GO:0009113;gene=purF;Parent=GCA000144955_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_000483727.1,SO:0001217,UniParc:UPI00023ED8EB,UniRef:UniRef100_A0A6A9GWK2,UniRef:UniRef50_Q5HQA0,UniRef:UniRef90_Q5HQA0;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	1034346	1035374	.	+	.	ID=GCA000144955_00974_gene;locus_tag=GCA000144955_00974;gene=purM
contig_1	Pyrodigal	CDS	1034346	1035374	.	+	0	ID=GCA000144955_00974;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000144955_00974;product=Phosphoribosylformylglycinamidine cyclo-ligase;Dbxref=GO:0004637,GO:0004641,GO:0005524,GO:0005829,GO:0006189,GO:0046084;gene=purM;Parent=GCA000144955_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_000030820.1,SO:0001217,UniParc:UPI0001DDA585,UniRef:UniRef100_UPI0001DDA585,UniRef:UniRef50_Q2FZI8,UniRef:UniRef90_Q2FZI8;ec_number=6.3.3.1
contig_1	Pyrodigal	gene	1035377	1035943	.	+	.	ID=GCA000144955_00975_gene;locus_tag=GCA000144955_00975;gene=purN
contig_1	Pyrodigal	CDS	1035377	1035943	.	+	0	ID=GCA000144955_00975;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000144955_00975;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0004644,GO:0005829,GO:0006189;gene=purN;Parent=GCA000144955_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0299,COG:F,RefSeq:WP_000238666.1,SO:0001217,UniParc:UPI0001DA221C,UniRef:UniRef100_A0A0D1IAU5,UniRef:UniRef50_Q5HQ98,UniRef:UniRef90_P65897;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	1035958	1037436	.	+	.	ID=GCA000144955_00976_gene;locus_tag=GCA000144955_00976;gene=purH
contig_1	Pyrodigal	CDS	1035958	1037436	.	+	0	ID=GCA000144955_00976;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000144955_00976;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003824,GO:0003937,GO:0004643,GO:0005829,GO:0006164,GO:0006189;gene=purH;Parent=GCA000144955_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0138,COG:F,KEGG:K00602,RefSeq:WP_000709282.1,SO:0001217,UniParc:UPI00005FE3E2,UniRef:UniRef100_Q2YX50,UniRef:UniRef50_P67543,UniRef:UniRef90_P67543;ec_number=3.5.4.10
contig_1	Pyrodigal	gene	1037458	1038705	.	+	.	ID=GCA000144955_00977_gene;locus_tag=GCA000144955_00977;gene=purD
contig_1	Pyrodigal	CDS	1037458	1038705	.	+	0	ID=GCA000144955_00977;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000144955_00977;product=Phosphoribosylamine--glycine ligase;Dbxref=GO:0004637,GO:0005524,GO:0006189,GO:0009113,GO:0046872;gene=purD;Parent=GCA000144955_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0151,COG:F,RefSeq:WP_001101916.1,SO:0001217,UniParc:UPI0001DDA586,UniRef:UniRef100_UPI0001DDA586,UniRef:UniRef50_P65895,UniRef:UniRef90_P65895;ec_number=6.3.4.13
contig_1	Pyrodigal	gene	1038971	1039777	.	-	.	ID=GCA000144955_00978_gene;locus_tag=GCA000144955_00978;gene=ecfT
contig_1	Pyrodigal	CDS	1038971	1039777	.	-	0	ID=GCA000144955_00978;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000144955_00978;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000144955_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000273256.1,SO:0001217,UniParc:UPI0001AE844F,UniRef:UniRef100_A0A7Z8DBG6,UniRef:UniRef50_S2XR66,UniRef:UniRef90_Q2FZI4
contig_1	Pyrodigal	gene	1039770	1041170	.	-	.	ID=GCA000144955_00979_gene;locus_tag=GCA000144955_00979;gene=ccmA
contig_1	Pyrodigal	CDS	1039770	1041170	.	-	0	ID=GCA000144955_00979;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA000144955_00979;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190;gene=ccmA;Parent=GCA000144955_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000921974.1,SO:0001217,UniParc:UPI0001DDA587,UniRef:UniRef100_UPI0001DDA587,UniRef:UniRef50_S2XKC2,UniRef:UniRef90_Q2FZI3;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	1041185	1041760	.	-	.	ID=GCA000144955_00980_gene;locus_tag=GCA000144955_00980;gene=ykoE
contig_1	Pyrodigal	CDS	1041185	1041760	.	-	0	ID=GCA000144955_00980;Name=Thiamine ABC transporter permease;locus_tag=GCA000144955_00980;product=Thiamine ABC transporter permease;gene=ykoE;Parent=GCA000144955_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4721,COG:H,KEGG:K16925,RefSeq:WP_000033477.1,SO:0001217,UniParc:UPI0000054B61,UniRef:UniRef100_Q2FZI2,UniRef:UniRef50_Q2FZI2,UniRef:UniRef90_Q2FZI2
contig_1	Infernal	regulatory_region	1041837	1041937	4.4e-12	-	.	ID=BPGLLONNDN_175;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Infernal	gene	1042310	1042547	.	-	.	ID=GCA000144955_00981_gene;locus_tag=GCA000144955_00981;gene=tsr24
contig_1	Infernal	ncRNA	1042310	1042547	4.7e-41	-	.	ID=GCA000144955_00981;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_00981;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_00981_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1042584	1044197	.	+	.	ID=GCA000144955_00982_gene;locus_tag=GCA000144955_00982;gene=tnp
contig_1	Pyrodigal	CDS	1042584	1044197	.	+	0	ID=GCA000144955_00982;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_00982;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,SO:0001217,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	1044257	1044391	.	-	.	ID=GCA000144955_00983_gene;locus_tag=GCA000144955_00983;gene=graF
contig_1	Pyrodigal	CDS	1044257	1044391	.	-	0	ID=GCA000144955_00983;Name=glycopeptide resistance-associated protein GraF;locus_tag=GCA000144955_00983;product=glycopeptide resistance-associated protein GraF;gene=graF;Parent=GCA000144955_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000064214.1,SO:0001217,UniParc:UPI0000054B60,UniRef:UniRef100_Q2FZI0,UniRef:UniRef50_Q2FZI0,UniRef:UniRef90_Q2FZI0
contig_1	Pyrodigal	gene	1044543	1045838	.	+	.	ID=GCA000144955_00984_gene;locus_tag=GCA000144955_00984;gene=auxA
contig_1	Pyrodigal	CDS	1044543	1045838	.	+	0	ID=GCA000144955_00984;Name=lipoteichoic acid stability factor AuxA;locus_tag=GCA000144955_00984;product=lipoteichoic acid stability factor AuxA;gene=auxA;Parent=GCA000144955_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009069.1,SO:0001217,UniParc:UPI00000D775F,UniRef:UniRef100_Q2FZH9,UniRef:UniRef50_A0A1E9A5G9,UniRef:UniRef90_Q2FZH9
contig_1	Infernal	gene	1045296	1045423	.	-	.	ID=GCA000144955_00985_gene;locus_tag=GCA000144955_00985;gene=sau-59
contig_1	Infernal	ncRNA	1045296	1045423	6.5e-23	-	.	ID=GCA000144955_00985;Name=Staphylococcus sRNA sau-59;locus_tag=GCA000144955_00985;product=Staphylococcus sRNA sau-59;Dbxref=RFAM:RF02393;Parent=GCA000144955_00985_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02393
contig_1	Pyrodigal	gene	1046261	1047433	.	+	.	ID=GCA000144955_00986_gene;locus_tag=GCA000144955_00986;gene=rlmK
contig_1	Pyrodigal	CDS	1046261	1047433	.	+	0	ID=GCA000144955_00986;Name=Class I SAM-dependent rRNA methyltransferase;locus_tag=GCA000144955_00986;product=Class I SAM-dependent rRNA methyltransferase;gene=rlmK;Parent=GCA000144955_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,RefSeq:WP_000685063.1,SO:0001217,UniParc:UPI00000D9D6D,UniRef:UniRef100_A0A6B5H130,UniRef:UniRef50_Q2FZH8,UniRef:UniRef90_Q2FZH8
contig_1	Pyrodigal	gene	1047487	1048029	.	+	.	ID=GCA000144955_00987_gene;locus_tag=GCA000144955_00987
contig_1	Pyrodigal	CDS	1047487	1048029	.	+	0	ID=GCA000144955_00987;Name=DUF697 domain-containing protein;locus_tag=GCA000144955_00987;product=DUF697 domain-containing protein;Parent=GCA000144955_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000505961.1,SO:0001217,UniParc:UPI0001C0B83C,UniRef:UniRef100_A0A8G2M7Q7,UniRef:UniRef50_A0AAE5M2R9,UniRef:UniRef90_Q2FZH7
contig_1	Pyrodigal	gene	1048183	1048449	.	+	.	ID=GCA000144955_00988_gene;locus_tag=GCA000144955_00988;gene=ptsH
contig_1	Pyrodigal	CDS	1048183	1048449	.	+	0	ID=GCA000144955_00988;Name=phosphocarrier protein HPr;locus_tag=GCA000144955_00988;product=phosphocarrier protein HPr;Dbxref=GO:0005737,GO:0009401;gene=ptsH;Parent=GCA000144955_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_000437472.1,SO:0001217,UniParc:UPI00001328F8,UniRef:UniRef100_Q5HH02,UniRef:UniRef50_Q9F166,UniRef:UniRef90_Q5HH02
contig_1	Pyrodigal	gene	1048452	1050170	.	+	.	ID=GCA000144955_00989_gene;locus_tag=GCA000144955_00989;gene=ptsI
contig_1	Pyrodigal	CDS	1048452	1050170	.	+	0	ID=GCA000144955_00989;Name=Phosphoenolpyruvate-protein phosphotransferase;locus_tag=GCA000144955_00989;product=Phosphoenolpyruvate-protein phosphotransferase;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872;gene=ptsI;Parent=GCA000144955_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_000040052.1,SO:0001217,UniParc:UPI00000D9D6E,UniRef:UniRef100_Q8NX83,UniRef:UniRef50_P23533,UniRef:UniRef90_Q99V14;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	1050406	1050639	.	-	.	ID=GCA000144955_00990_gene;locus_tag=GCA000144955_00990;gene=nrdH
contig_1	Pyrodigal	CDS	1050406	1050639	.	-	0	ID=GCA000144955_00990;Name=glutaredoxin-like protein NrdH;locus_tag=GCA000144955_00990;product=glutaredoxin-like protein NrdH;gene=nrdH;Parent=GCA000144955_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001289614,COG:COG0695,COG:O,RefSeq:WP_001289618.1,SO:0001217,UniParc:UPI00000D766A,UniRef:UniRef100_A0A0D1G1N0,UniRef:UniRef50_Q2FZH4,UniRef:UniRef90_Q2FZH4
contig_1	Pyrodigal	gene	1050837	1052198	.	+	.	ID=GCA000144955_00991_gene;locus_tag=GCA000144955_00991;gene=appC
contig_1	Pyrodigal	CDS	1050837	1052198	.	+	0	ID=GCA000144955_00991;Name=Putative cytochrome bd menaquinol oxidase subunit I;locus_tag=GCA000144955_00991;product=Putative cytochrome bd menaquinol oxidase subunit I;gene=appC;Parent=GCA000144955_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_000381849.1,SO:0001217,UniParc:UPI0000054B5A,UniRef:UniRef100_Q2FZH3,UniRef:UniRef50_A0A2S5D5L8,UniRef:UniRef90_A0A7U7PY91;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1052195	1053214	.	+	.	ID=GCA000144955_00992_gene;locus_tag=GCA000144955_00992;gene=appB
contig_1	Pyrodigal	CDS	1052195	1053214	.	+	0	ID=GCA000144955_00992;Name=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;locus_tag=GCA000144955_00992;product=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;gene=appB;Parent=GCA000144955_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_000638457.1,SO:0001217,UniParc:UPI0001DDA589,UniRef:UniRef100_UPI0001DDA589,UniRef:UniRef50_A0AAJ5RM05,UniRef:UniRef90_Q2FZH2;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1053347	1054009	.	+	.	ID=GCA000144955_00993_gene;locus_tag=GCA000144955_00993;gene=trkA
contig_1	Pyrodigal	CDS	1053347	1054009	.	+	0	ID=GCA000144955_00993;Name=TrkA family potassium uptake protein;locus_tag=GCA000144955_00993;product=TrkA family potassium uptake protein;gene=trkA;Parent=GCA000144955_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000514290.1,SO:0001217,UniParc:UPI0000054B56,UniRef:UniRef100_Q2FZH1,UniRef:UniRef50_Q2FZH1,UniRef:UniRef90_Q2FZH1
contig_1	Pyrodigal	gene	1054123	1055820	.	-	.	ID=GCA000144955_00994_gene;locus_tag=GCA000144955_00994;gene=rnjA
contig_1	Pyrodigal	CDS	1054123	1055820	.	-	0	ID=GCA000144955_00994;Name=ribonuclease J1;locus_tag=GCA000144955_00994;product=ribonuclease J1;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnjA;Parent=GCA000144955_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000811375.1,SO:0001217,UniParc:UPI0000054B55,UniRef:UniRef100_Q2FZG9,UniRef:UniRef50_Q2FZG9,UniRef:UniRef90_Q2FZG9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1055820	1056038	.	-	.	ID=GCA000144955_00995_gene;locus_tag=GCA000144955_00995;gene=rpoY
contig_1	Pyrodigal	CDS	1055820	1056038	.	-	0	ID=GCA000144955_00995;Name=DNA-directed RNA polymerase subunit epsilon;locus_tag=GCA000144955_00995;product=DNA-directed RNA polymerase subunit epsilon;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677;gene=rpoY;Parent=GCA000144955_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5503,COG:KV,RefSeq:WP_000257888.1,SO:0001217,UniParc:UPI0000054B54,UniRef:UniRef100_Q2FZG8,UniRef:UniRef50_Q2FZG8,UniRef:UniRef90_Q2FZG8;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1056520	1057071	.	-	.	ID=GCA000144955_00996_gene;locus_tag=GCA000144955_00996;gene=def
contig_1	Pyrodigal	CDS	1056520	1057071	.	-	0	ID=GCA000144955_00996;Name=peptide deformylase;locus_tag=GCA000144955_00996;product=peptide deformylase;Dbxref=GO:0006412,GO:0036211,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000144955_00996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000957036.1,SO:0001217,UniParc:UPI00000D9D72,UniRef:UniRef100_Q5HGZ3,UniRef:UniRef50_Q45495,UniRef:UniRef90_Q5HGZ3;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	1057436	1058062	.	+	.	ID=GCA000144955_00997_gene;locus_tag=GCA000144955_00997
contig_1	Pyrodigal	CDS	1057436	1058062	.	+	0	ID=GCA000144955_00997;Name=Lipoprotein;locus_tag=GCA000144955_00997;product=Lipoprotein;Parent=GCA000144955_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000668337.1,SO:0001217,UniParc:UPI0001DDA58A,UniRef:UniRef100_UPI0001DDA58A,UniRef:UniRef50_Q2FZG5,UniRef:UniRef90_Q2FZG5
contig_1	Pyrodigal	gene	1058233	1059345	.	+	.	ID=GCA000144955_00998_gene;locus_tag=GCA000144955_00998;gene=pdhA
contig_1	Pyrodigal	CDS	1058233	1059345	.	+	0	ID=GCA000144955_00998;Name=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;locus_tag=GCA000144955_00998;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;Dbxref=GO:0004739,GO:0006086,GO:0009083,GO:0045254;gene=pdhA;Parent=GCA000144955_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000035320.1,SO:0001217,UniParc:UPI000000978E,UniRef:UniRef100_Q5HGZ1,UniRef:UniRef50_P21881,UniRef:UniRef90_Q5HGZ1;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	1059349	1060326	.	+	.	ID=GCA000144955_00999_gene;locus_tag=GCA000144955_00999;gene=pdhB
contig_1	Pyrodigal	CDS	1059349	1060326	.	+	0	ID=GCA000144955_00999;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000144955_00999;product=Pyruvate dehydrogenase E1 component subunit beta;Dbxref=GO:0004739;gene=pdhB;Parent=GCA000144955_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_000068176.1,SO:0001217,UniParc:UPI0000054B50,UniRef:UniRef100_P0A0A1,UniRef:UniRef50_Q5HQ75,UniRef:UniRef90_Q5HQ75;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	1060417	1061709	.	+	.	ID=GCA000144955_01000_gene;locus_tag=GCA000144955_01000;gene=pdhC
contig_1	Pyrodigal	CDS	1060417	1061709	.	+	0	ID=GCA000144955_01000;Name=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000144955_01000;product=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;Dbxref=GO:0004742,GO:0005737,GO:0031405;gene=pdhC;Parent=GCA000144955_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000863443.1,SO:0001217,UniParc:UPI0001DDA58B,UniRef:UniRef100_UPI0001DDA58B,UniRef:UniRef50_P21883,UniRef:UniRef90_P65635;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	1061713	1063119	.	+	.	ID=GCA000144955_01001_gene;locus_tag=GCA000144955_01001;gene=lpdA
contig_1	Pyrodigal	CDS	1061713	1063119	.	+	0	ID=GCA000144955_01001;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000144955_01001;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0016020,GO:0050660;gene=lpdA;Parent=GCA000144955_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_000260117.1,SO:0001217,UniParc:UPI0000129471,UniRef:UniRef100_Q5HGY8,UniRef:UniRef50_P11959,UniRef:UniRef90_Q5HGY8;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1063287	1063562	.	+	.	ID=GCA000144955_01002_gene;locus_tag=GCA000144955_01002;gene=yktA
contig_1	Pyrodigal	CDS	1063287	1063562	.	+	0	ID=GCA000144955_01002;Name=UPF0223 protein SaurJH1_1179;locus_tag=GCA000144955_01002;product=UPF0223 protein SaurJH1_1179;gene=yktA;Parent=GCA000144955_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4476,COG:S,RefSeq:WP_000455590.1,SO:0001217,UniParc:UPI0001DDA72F,UniRef:UniRef100_A0A6A9GXA1,UniRef:UniRef50_Q2G2A2,UniRef:UniRef90_Q2G2A2
contig_1	Pyrodigal	gene	1063706	1064245	.	+	.	ID=GCA000144955_01003_gene;locus_tag=GCA000144955_01003;gene=qdoI
contig_1	Pyrodigal	CDS	1063706	1064245	.	+	0	ID=GCA000144955_01003;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_01003;product=HTH cro/C1-type domain-containing protein;gene=qdoI;Parent=GCA000144955_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1917,COG:R,RefSeq:WP_001020625.1,SO:0001217,UniParc:UPI0000054B4B,UniRef:UniRef100_Q2G2A6,UniRef:UniRef50_Q2G2A6,UniRef:UniRef90_Q2G2A6
contig_1	Pyrodigal	gene	1064258	1065352	.	+	.	ID=GCA000144955_01004_gene;locus_tag=GCA000144955_01004;gene=potA
contig_1	Pyrodigal	CDS	1064258	1065352	.	+	0	ID=GCA000144955_01004;Name=Spermidine/putrescine import ATP-binding protein PotA;locus_tag=GCA000144955_01004;product=Spermidine/putrescine import ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015417,GO:0016887,GO:0043190;gene=potA;Parent=GCA000144955_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000433551.1,SO:0001217,UniParc:UPI00000D7714,UniRef:UniRef100_Q2G2A7,UniRef:UniRef50_Q24XJ2,UniRef:UniRef90_Q2G2A7;ec_number=7.6.2.11
contig_1	Pyrodigal	gene	1065345	1066142	.	+	.	ID=GCA000144955_01005_gene;locus_tag=GCA000144955_01005;gene=potB
contig_1	Pyrodigal	CDS	1065345	1066142	.	+	0	ID=GCA000144955_01005;Name=Spermidine/putrescine ABC transporter-like protein;locus_tag=GCA000144955_01005;product=Spermidine/putrescine ABC transporter-like protein;gene=potB;Parent=GCA000144955_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_001246553.1,SO:0001217,UniParc:UPI0001DDA730,UniRef:UniRef100_UPI0001DDA730,UniRef:UniRef50_S2XR89,UniRef:UniRef90_A0A7U7IE88
contig_1	Pyrodigal	gene	1066148	1066957	.	+	.	ID=GCA000144955_01006_gene;locus_tag=GCA000144955_01006;gene=potC
contig_1	Pyrodigal	CDS	1066148	1066957	.	+	0	ID=GCA000144955_01006;Name=ABC transporter permease;locus_tag=GCA000144955_01006;product=ABC transporter permease;gene=potC;Parent=GCA000144955_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_000872390.1,SO:0001217,UniParc:UPI00000D7872,UniRef:UniRef100_Q2G2A9,UniRef:UniRef50_S2XKD8,UniRef:UniRef90_A0A2K4AL30
contig_1	Pyrodigal	gene	1066957	1068030	.	+	.	ID=GCA000144955_01007_gene;locus_tag=GCA000144955_01007;gene=potD
contig_1	Pyrodigal	CDS	1066957	1068030	.	+	0	ID=GCA000144955_01007;Name=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;locus_tag=GCA000144955_01007;product=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;gene=potD;Parent=GCA000144955_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_000819682.1,SO:0001217,UniParc:UPI0001DDA731,UniRef:UniRef100_UPI0001DDA731,UniRef:UniRef50_Q5HQ67,UniRef:UniRef90_A0A390B6L2
contig_1	Pyrodigal	gene	1068104	1069123	.	+	.	ID=GCA000144955_01008_gene;locus_tag=GCA000144955_01008;gene=auxB
contig_1	Pyrodigal	CDS	1068104	1069123	.	+	0	ID=GCA000144955_01008;Name=lipoteichoic acid stability factor AuxB;locus_tag=GCA000144955_01008;product=lipoteichoic acid stability factor AuxB;gene=auxB;Parent=GCA000144955_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145499.1,SO:0001217,UniParc:UPI00000522D5,UniRef:UniRef100_Q2G2G6,UniRef:UniRef50_A0A974KWU6,UniRef:UniRef90_Q2G2G6
contig_1	Pyrodigal	gene	1069406	1069825	.	+	.	ID=GCA000144955_01009_gene;locus_tag=GCA000144955_01009
contig_1	Pyrodigal	CDS	1069406	1069825	.	+	0	ID=GCA000144955_01009;Name=DUF4064 domain-containing protein;locus_tag=GCA000144955_01009;product=DUF4064 domain-containing protein;Parent=GCA000144955_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080456.1,SO:0001217,UniParc:UPI0001DDA732,UniRef:UniRef100_UPI0001DDA732,UniRef:UniRef50_Q2G2G5,UniRef:UniRef90_Q2G2G5
contig_1	Pyrodigal	gene	1069907	1071259	.	-	.	ID=GCA000144955_01010_gene;locus_tag=GCA000144955_01010;gene=mntH
contig_1	Pyrodigal	CDS	1069907	1071259	.	-	0	ID=GCA000144955_01010;Name=Nramp family divalent metal transporter;locus_tag=GCA000144955_01010;product=Nramp family divalent metal transporter;Dbxref=GO:0005384,GO:0005886,GO:0015086,GO:0015293,GO:0016020,GO:0022857,GO:0034755,GO:0046872,GO:0055085;gene=mntH;Parent=GCA000144955_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_001060840.1,SO:0001217,UniParc:UPI0001DDA733,UniRef:UniRef100_UPI0001DDA733,UniRef:UniRef50_Q2G2G3,UniRef:UniRef90_Q2G2G3
contig_1	Pyrodigal	gene	1071442	1072056	.	-	.	ID=GCA000144955_01011_gene;locus_tag=GCA000144955_01011;gene=yktB
contig_1	Pyrodigal	CDS	1071442	1072056	.	-	0	ID=GCA000144955_01011;Name=UPF0637 protein MW0989;locus_tag=GCA000144955_01011;product=UPF0637 protein MW0989;gene=yktB;Parent=GCA000144955_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4493,COG:S,RefSeq:WP_000170598.1,SO:0001217,UniParc:UPI00005FE3F9,UniRef:UniRef100_Q2YX68,UniRef:UniRef50_Q2G2G7,UniRef:UniRef90_Q2G2G7
contig_1	Pyrodigal	gene	1072213	1073040	.	+	.	ID=GCA000144955_01012_gene;locus_tag=GCA000144955_01012;gene=suhB
contig_1	Pyrodigal	CDS	1072213	1073040	.	+	0	ID=GCA000144955_01012;Name=Inositol monophosphatase;locus_tag=GCA000144955_01012;product=Inositol monophosphatase;gene=suhB;Parent=GCA000144955_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_001240325.1,SO:0001217,UniParc:UPI0001DDA734,UniRef:UniRef100_UPI0001DDA734,UniRef:UniRef50_A0A654A156,UniRef:UniRef90_A0A659IB49;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	1073194	1073385	.	-	.	ID=GCA000144955_01013_gene;locus_tag=GCA000144955_01013;gene=ylaF
contig_1	Pyrodigal	CDS	1073194	1073385	.	-	0	ID=GCA000144955_01013;Name=YlaF family protein;locus_tag=GCA000144955_01013;product=YlaF family protein;gene=ylaF;Parent=GCA000144955_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000810619.1,SO:0001217,UniParc:UPI00003B15A3,UniRef:UniRef100_A0A7Z7W1E3,UniRef:UniRef50_Q49WN3,UniRef:UniRef90_A0A2K4ALB3
contig_1	Pyrodigal	gene	1073487	1075334	.	+	.	ID=GCA000144955_01014_gene;locus_tag=GCA000144955_01014;gene=typA
contig_1	Pyrodigal	CDS	1073487	1075334	.	+	0	ID=GCA000144955_01014;Name=translational GTPase TypA;locus_tag=GCA000144955_01014;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA000144955_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_000182650.1,SO:0001217,UniParc:UPI0001DDA735,UniRef:UniRef100_A0A2S6D4S7,UniRef:UniRef50_A0A0R2DHU7,UniRef:UniRef90_A0A2A1K7F6
contig_1	Pyrodigal	gene	1075643	1076125	.	-	.	ID=GCA000144955_01015_gene;locus_tag=GCA000144955_01015
contig_1	Pyrodigal	CDS	1075643	1076125	.	-	0	ID=GCA000144955_01015;Name=Phage protein;locus_tag=GCA000144955_01015;product=Phage protein;Parent=GCA000144955_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000614714.1,SO:0001217,UniParc:UPI0001DDA736,UniRef:UniRef100_UPI0001DDA736,UniRef:UniRef50_B9DPZ4,UniRef:UniRef90_A0A7U7JTX4
contig_1	Pyrodigal	gene	1076266	1076541	.	+	.	ID=GCA000144955_01016_gene;locus_tag=GCA000144955_01016;gene=ylaN
contig_1	Pyrodigal	CDS	1076266	1076541	.	+	0	ID=GCA000144955_01016;Name=UPF0358 protein SaurJH1_1194;locus_tag=GCA000144955_01016;product=UPF0358 protein SaurJH1_1194;gene=ylaN;Parent=GCA000144955_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4838,COG:S,RefSeq:WP_001118970.1,SO:0001217,UniParc:UPI00003B15A5,UniRef:UniRef100_Q6GHX3,UniRef:UniRef50_Q2G2C3,UniRef:UniRef90_Q2G2C3
contig_1	Pyrodigal	gene	1076855	1078081	.	+	.	ID=GCA000144955_01017_gene;locus_tag=GCA000144955_01017;gene=ftsW
contig_1	Pyrodigal	CDS	1076855	1078081	.	+	0	ID=GCA000144955_01017;Name=cell division protein FtsW;locus_tag=GCA000144955_01017;product=cell division protein FtsW;gene=ftsW;Parent=GCA000144955_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000787940,COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_000787940.1,SO:0001217,UniParc:UPI00000D9D78,UniRef:UniRef100_Q2G2C2,UniRef:UniRef50_A0AAE8PBF8,UniRef:UniRef90_A0AAE8PBF8
contig_1	Pyrodigal	gene	1078641	1082093	.	+	.	ID=GCA000144955_01018_gene;locus_tag=GCA000144955_01018;gene=pycA
contig_1	Pyrodigal	CDS	1078641	1082093	.	+	0	ID=GCA000144955_01018;Name=pyruvate carboxylase;locus_tag=GCA000144955_01018;product=pyruvate carboxylase;Dbxref=GO:0004736,GO:0005524,GO:0005737,GO:0006090,GO:0006094,GO:0009374,GO:0042802,GO:0046872;gene=pycA;Parent=GCA000144955_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1038,KEGG:K01958,RefSeq:WP_000809509.1,SO:0001217,UniParc:UPI0001DDA737,UniRef:UniRef100_A0AAW9XGF0,UniRef:UniRef50_A0A0H3JRU9,UniRef:UniRef90_A0A0H3JRU9;ec_number=6.4.1.1
contig_1	Pyrodigal	gene	1082234	1083304	.	-	.	ID=GCA000144955_01019_gene;locus_tag=GCA000144955_01019;gene=ctaA
contig_1	Pyrodigal	CDS	1082234	1083304	.	-	0	ID=GCA000144955_01019;Name=Heme A synthase;locus_tag=GCA000144955_01019;product=Heme A synthase;Dbxref=GO:0005886,GO:0006784,GO:0016653,GO:0046872;gene=ctaA;Parent=GCA000144955_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1612,COG:H,KEGG:K02259,SO:0001217,UniParc:UPI0001527FF3,UniRef:UniRef100_A0A2P8SU63,UniRef:UniRef50_Q2G2C0,UniRef:UniRef90_Q2G2C0;ec_number=1.17.99.9
contig_1	Pyrodigal	gene	1083585	1084496	.	+	.	ID=GCA000144955_01020_gene;locus_tag=GCA000144955_01020;gene=cyoE
contig_1	Pyrodigal	CDS	1083585	1084496	.	+	0	ID=GCA000144955_01020;Name=heme o synthase;locus_tag=GCA000144955_01020;product=heme o synthase;Dbxref=GO:0005886,GO:0006783,GO:0008495,GO:0016020,GO:0048034;gene=cyoE;Parent=GCA000144955_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0109,COG:HI,RefSeq:WP_000031403.1,SO:0001217,UniParc:UPI00000D9D7A,UniRef:UniRef100_Q6GHW9,UniRef:UniRef50_Q8CPM1,UniRef:UniRef90_Q2G2B9;ec_number=2.5.1.141
contig_1	Pyrodigal	gene	1084521	1084982	.	+	.	ID=GCA000144955_01021_gene;locus_tag=GCA000144955_01021;gene=ctaM
contig_1	Pyrodigal	CDS	1084521	1084982	.	+	0	ID=GCA000144955_01021;Name=DUF420 domain-containing protein;locus_tag=GCA000144955_01021;product=DUF420 domain-containing protein;gene=ctaM;Parent=GCA000144955_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2322,COG:O,KEGG:K08976,RefSeq:WP_000538766.1,SO:0001217,UniParc:UPI00000D787A,UniRef:UniRef100_Q2FZG3,UniRef:UniRef50_Q2FZG3,UniRef:UniRef90_Q2FZG3
contig_1	Pyrodigal	gene	1085309	1086346	.	+	.	ID=GCA000144955_01022_gene;locus_tag=GCA000144955_01022
contig_1	Pyrodigal	CDS	1085309	1086346	.	+	0	ID=GCA000144955_01022;Name=Allergen V5/Tpx-1 like protein;locus_tag=GCA000144955_01022;product=Allergen V5/Tpx-1 like protein;Parent=GCA000144955_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733415.1,SO:0001217,UniParc:UPI0001DDA738,UniRef:UniRef100_UPI0001DDA738,UniRef:UniRef50_Q5HQ49,UniRef:UniRef90_A0A229LYA7
contig_1	Pyrodigal	gene	1086362	1086796	.	+	.	ID=GCA000144955_01023_gene;locus_tag=GCA000144955_01023;gene=ylbF
contig_1	Pyrodigal	CDS	1086362	1086796	.	+	0	ID=GCA000144955_01023;Name=YlbF family regulator;locus_tag=GCA000144955_01023;product=YlbF family regulator;gene=ylbF;Parent=GCA000144955_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,RefSeq:WP_000606480.1,SO:0001217,UniParc:UPI0000054B34,UniRef:UniRef100_Q2FZG0,UniRef:UniRef50_Q2FZG0,UniRef:UniRef90_Q2FZG0
contig_1	Pyrodigal	gene	1086859	1087785	.	-	.	ID=GCA000144955_01024_gene;locus_tag=GCA000144955_01024;gene=ugpQ
contig_1	Pyrodigal	CDS	1086859	1087785	.	-	0	ID=GCA000144955_01024;Name=Glycerophosphodiester phosphodiesterase;locus_tag=GCA000144955_01024;product=Glycerophosphodiester phosphodiesterase;gene=ugpQ;Parent=GCA000144955_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000757598.1,SO:0001217,UniParc:UPI0001DDA739,UniRef:UniRef100_UPI0001DDA739,UniRef:UniRef50_A0A3A3AIN7,UniRef:UniRef90_A0A3A3AIN7;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1088023	1088277	.	+	.	ID=GCA000144955_01025_gene;locus_tag=GCA000144955_01025;gene=ylbG
contig_1	Pyrodigal	CDS	1088023	1088277	.	+	0	ID=GCA000144955_01025;Name=UPF0298 protein SACOL1131;locus_tag=GCA000144955_01025;product=UPF0298 protein SACOL1131;Dbxref=GO:0005737;gene=ylbG;Parent=GCA000144955_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4471,COG:S,RefSeq:WP_001049150.1,SO:0001217,UniParc:UPI0000054B32,UniRef:UniRef100_Q2FZF8,UniRef:UniRef50_Q2FZF8,UniRef:UniRef90_Q2FZF8
contig_1	Pyrodigal	gene	1088280	1088669	.	-	.	ID=GCA000144955_01026_gene;locus_tag=GCA000144955_01026
contig_1	Pyrodigal	CDS	1088280	1088669	.	-	0	ID=GCA000144955_01026;Name=Methylthioribose kinase;locus_tag=GCA000144955_01026;product=Methylthioribose kinase;Parent=GCA000144955_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000814565.1,SO:0001217,UniParc:UPI0000054B31,UniRef:UniRef100_Q2FZF7,UniRef:UniRef50_B9DPZ2,UniRef:UniRef90_A0A2K4AL88
contig_1	Pyrodigal	gene	1088739	1089281	.	+	.	ID=GCA000144955_01027_gene;locus_tag=GCA000144955_01027;gene=rsmD
contig_1	Pyrodigal	CDS	1088739	1089281	.	+	0	ID=GCA000144955_01027;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA000144955_01027;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0031167,GO:0052913;gene=rsmD;Parent=GCA000144955_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,RefSeq:WP_001263799.1,SO:0001217,UniParc:UPI0001DDA73A,UniRef:UniRef100_UPI0001DDA73A,UniRef:UniRef50_A0A9N8IIV2,UniRef:UniRef90_A0A9N8IIV2;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	1089283	1089765	.	+	.	ID=GCA000144955_01028_gene;locus_tag=GCA000144955_01028;gene=coaD
contig_1	Pyrodigal	CDS	1089283	1089765	.	+	0	ID=GCA000144955_01028;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000144955_01028;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000144955_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_000401377.1,SO:0001217,UniParc:UPI0000054B2E,UniRef:UniRef100_Q2FZF5,UniRef:UniRef50_Q2FZF5,UniRef:UniRef90_Q2FZF5;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	1089827	1090966	.	-	.	ID=GCA000144955_01029_gene;locus_tag=GCA000144955_01029;gene=tmcAL
contig_1	Pyrodigal	CDS	1089827	1090966	.	-	0	ID=GCA000144955_01029;Name=nucleotidyltransferase;locus_tag=GCA000144955_01029;product=nucleotidyltransferase;Dbxref=GO:0000049,GO:0005524,GO:0005737,GO:0006400,GO:0016879;gene=tmcAL;Parent=GCA000144955_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1323,COG:J,KEGG:K27343,RefSeq:WP_000843623.1,SO:0001217,UniParc:UPI0001DDA73B,UniRef:UniRef100_UPI0001DDA73B,UniRef:UniRef50_Q2FZF4,UniRef:UniRef90_Q2FZF4;ec_number=6.3.4.-
contig_1	Pyrodigal	gene	1091093	1091650	.	+	.	ID=GCA000144955_01030_gene;locus_tag=GCA000144955_01030;gene=yceD
contig_1	Pyrodigal	CDS	1091093	1091650	.	+	0	ID=GCA000144955_01030;Name=DUF177 domain-containing protein;locus_tag=GCA000144955_01030;product=DUF177 domain-containing protein;gene=yceD;Parent=GCA000144955_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_000872155.1,SO:0001217,UniParc:UPI0001DA22B9,UniRef:UniRef100_A0A0D1HMB3,UniRef:UniRef50_Q2FZF3,UniRef:UniRef90_Q2FZF3
contig_1	Pyrodigal	gene	1091730	1091903	.	+	.	ID=GCA000144955_01031_gene;locus_tag=GCA000144955_01031;gene=rpmF
contig_1	Pyrodigal	CDS	1091730	1091903	.	+	0	ID=GCA000144955_01031;Name=50S ribosomal protein L32;locus_tag=GCA000144955_01031;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000144955_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_000290472.1,SO:0001217,UniParc:UPI0000133F6C,UniRef:UniRef100_Q2FHV3,UniRef:UniRef50_B7JC05,UniRef:UniRef90_Q5HQ39
contig_1	Pyrodigal	gene	1092056	1093981	.	-	.	ID=GCA000144955_01032_gene;locus_tag=GCA000144955_01032;gene=isdB
contig_1	Pyrodigal	CDS	1092056	1093981	.	-	0	ID=GCA000144955_01032;Name=iron-regulated surface determinant protein B%2C haemoglobin receptor;locus_tag=GCA000144955_01032;product=iron-regulated surface determinant protein B%2C haemoglobin receptor;Dbxref=GO:0005576,GO:0015232,GO:0015886,GO:0020037,GO:0046872;gene=isdB;Parent=GCA000144955_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_001041596.1,SO:0001217,UniParc:UPI0001DDA73C,UniRef:UniRef100_UPI0001DDA73C,UniRef:UniRef50_Q2FZF0,UniRef:UniRef90_Q2FZF0,VFDB:VFC0272,VFDB:VFG001317
contig_1	Pyrodigal	gene	1094184	1095236	.	-	.	ID=GCA000144955_01033_gene;locus_tag=GCA000144955_01033;gene=isdA
contig_1	Pyrodigal	CDS	1094184	1095236	.	-	0	ID=GCA000144955_01033;Name=iron-regulated surface determinant protein A;locus_tag=GCA000144955_01033;product=iron-regulated surface determinant protein A;Dbxref=GO:0005576,GO:0046872;gene=isdA;Parent=GCA000144955_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000160868.1,SO:0001217,UniParc:UPI0001DDA73D,UniRef:UniRef100_UPI0001DDA73D,UniRef:UniRef50_Q2FZE9,UniRef:UniRef90_Q2FZE9,VFDB:VFC0272,VFDB:VFG001318
contig_1	Pyrodigal	gene	1095445	1096128	.	+	.	ID=GCA000144955_01034_gene;locus_tag=GCA000144955_01034;gene=isdC
contig_1	Pyrodigal	CDS	1095445	1096128	.	+	0	ID=GCA000144955_01034;Name=iron-regulated surface determinant protein C;locus_tag=GCA000144955_01034;product=iron-regulated surface determinant protein C;Dbxref=GO:0005576,GO:0009274,GO:0015886,GO:0030492,GO:0046872;gene=isdC;Parent=GCA000144955_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000789816.1,SO:0001217,UniParc:UPI0001DDA73E,UniRef:UniRef100_A0A380E1J8,UniRef:UniRef50_Q8KQR1,UniRef:UniRef90_Q8KQR1,VFDB:VFC0272,VFDB:VFG001319
contig_1	Pyrodigal	gene	1096128	1097204	.	+	.	ID=GCA000144955_01035_gene;locus_tag=GCA000144955_01035;gene=isdD
contig_1	Pyrodigal	CDS	1096128	1097204	.	+	0	ID=GCA000144955_01035;Name=iron-regulated surface determinant protein D;locus_tag=GCA000144955_01035;product=iron-regulated surface determinant protein D;gene=isdD;Parent=GCA000144955_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K25116,RefSeq:WP_014532750.1,SO:0001217,UniParc:UPI0001DDA73F,UniRef:UniRef100_UPI0001DDA73F,UniRef:UniRef50_Q2FZE7,UniRef:UniRef90_Q2FZE7,VFDB:VFC0272,VFDB:VFG044266
contig_1	Pyrodigal	gene	1097201	1098079	.	+	.	ID=GCA000144955_01036_gene;locus_tag=GCA000144955_01036;gene=isdE
contig_1	Pyrodigal	CDS	1097201	1098079	.	+	0	ID=GCA000144955_01036;Name=iron-regulated surface determinant protein E;locus_tag=GCA000144955_01036;product=iron-regulated surface determinant protein E;Dbxref=GO:0005886,GO:0015886,GO:0016020,GO:0020037,GO:0046872,GO:0071281;gene=isdE;Parent=GCA000144955_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_001220207.1,SO:0001217,UniParc:UPI0001DDA740,UniRef:UniRef100_UPI0001DDA740,UniRef:UniRef50_Q2FZE6,UniRef:UniRef90_Q2FZE6,VFDB:VFC0272,VFDB:VFG001321
contig_1	Pyrodigal	gene	1098089	1099057	.	+	.	ID=GCA000144955_01037_gene;locus_tag=GCA000144955_01037;gene=isdF
contig_1	Pyrodigal	CDS	1098089	1099057	.	+	0	ID=GCA000144955_01037;Name=hemin ABC transporter permease protein IsdF;locus_tag=GCA000144955_01037;product=hemin ABC transporter permease protein IsdF;Dbxref=GO:0005886,GO:0022857,GO:0033214;gene=isdF;Parent=GCA000144955_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594537,COG:COG0609,COG:P,SO:0001217,UniRef:UniRef50_Q2FZE5,UniRef:UniRef90_Q2FZE5
contig_1	Pyrodigal	gene	1099119	1099853	.	+	.	ID=GCA000144955_01038_gene;locus_tag=GCA000144955_01038;gene=srtB
contig_1	Pyrodigal	CDS	1099119	1099853	.	+	0	ID=GCA000144955_01038;Name=NPQTN specific sortase B;locus_tag=GCA000144955_01038;product=NPQTN specific sortase B;Dbxref=GO:0004197,GO:0005886,GO:0016485,GO:0016787,GO:0045184;gene=srtB;Parent=GCA000144955_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4509,COG:S,KEGG:K08600,RefSeq:WP_001242424.1,SO:0001217,UniParc:UPI0001DDA742,UniRef:UniRef100_UPI0001DDA742,UniRef:UniRef50_Q2FZE3,UniRef:UniRef90_Q2FZE3,VFDB:VFC0272,VFDB:VFG044269;ec_number=3.4.22.71
contig_1	Pyrodigal	gene	1099872	1100195	.	+	.	ID=GCA000144955_01039_gene;locus_tag=GCA000144955_01039;gene=isdG
contig_1	Pyrodigal	CDS	1099872	1100195	.	+	0	ID=GCA000144955_01039;Name=staphylobilin-forming heme oxygenase IsdG;locus_tag=GCA000144955_01039;product=staphylobilin-forming heme oxygenase IsdG;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdG;Parent=GCA000144955_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000670950,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000670950.1,SO:0001217,UniParc:UPI0000054403,UniRef:UniRef100_Q2FZE2,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2FZE2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	1100579	1101319	.	+	.	ID=GCA000144955_01040_gene;locus_tag=GCA000144955_01040;gene=spoU
contig_1	Pyrodigal	CDS	1100579	1101319	.	+	0	ID=GCA000144955_01040;Name=RNA methyltransferase;locus_tag=GCA000144955_01040;product=RNA methyltransferase;gene=spoU;Parent=GCA000144955_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000435381.1,SO:0001217,UniParc:UPI0001DDA8EE,UniRef:UniRef100_A0AAW9XH25,UniRef:UniRef50_A0A098H324,UniRef:UniRef90_A0A098H324
contig_1	Pyrodigal	gene	1101700	1102758	.	+	.	ID=GCA000144955_01041_gene;locus_tag=GCA000144955_01041;gene=pheS
contig_1	Pyrodigal	CDS	1101700	1102758	.	+	0	ID=GCA000144955_01041;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000144955_01041;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432,GO:0016740;gene=pheS;Parent=GCA000144955_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0016,COG:J,KEGG:K01889,RefSeq:WP_000003566.1,SO:0001217,UniParc:UPI0000030AD8,UniRef:UniRef100_P68847,UniRef:UniRef50_Q4L5E3,UniRef:UniRef90_Q4L5E3;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1102758	1105160	.	+	.	ID=GCA000144955_01042_gene;locus_tag=GCA000144955_01042;gene=pheT
contig_1	Pyrodigal	CDS	1102758	1105160	.	+	0	ID=GCA000144955_01042;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000144955_01042;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0006432,GO:0009328,GO:0016740;gene=pheT;Parent=GCA000144955_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_000908993.1,SO:0001217,UniParc:UPI0001DDA8EF,UniRef:UniRef100_UPI0001DDA8EF,UniRef:UniRef50_Q4L5E4,UniRef:UniRef90_Q2FHU2;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1105462	1106400	.	-	.	ID=GCA000144955_01043_gene;locus_tag=GCA000144955_01043;gene=rnhC
contig_1	Pyrodigal	CDS	1105462	1106400	.	-	0	ID=GCA000144955_01043;Name=ribonuclease HIII;locus_tag=GCA000144955_01043;product=ribonuclease HIII;Dbxref=GO:0000287,GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0006401,GO:0032299,GO:0043137;gene=rnhC;Parent=GCA000144955_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1039,COG:L,KEGG:K03471,RefSeq:WP_001284265.1,SO:0001217,UniParc:UPI0001DDA8F0,UniRef:UniRef100_UPI0001DDA8F0,UniRef:UniRef50_Q2FZD7,UniRef:UniRef90_Q2FZD7;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1106776	1107042	.	+	.	ID=GCA000144955_01044_gene;locus_tag=GCA000144955_01044;gene=zapA
contig_1	Pyrodigal	CDS	1106776	1107042	.	+	0	ID=GCA000144955_01044;Name=cell division protein ZapA;locus_tag=GCA000144955_01044;product=cell division protein ZapA;Dbxref=GO:0051301;gene=zapA;Parent=GCA000144955_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000046704.1,SO:0001217,UniParc:UPI00000D7660,UniRef:UniRef100_A0A7Z7W1A1,UniRef:UniRef50_A0A085UFE6,UniRef:UniRef90_A0A0D3Q6G5
contig_1	Pyrodigal	gene	1107043	1107564	.	+	.	ID=GCA000144955_01045_gene;locus_tag=GCA000144955_01045;gene=cvpA
contig_1	Pyrodigal	CDS	1107043	1107564	.	+	0	ID=GCA000144955_01045;Name=CvpA family protein;locus_tag=GCA000144955_01045;product=CvpA family protein;gene=cvpA;Parent=GCA000144955_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_000234072.1,SO:0001217,UniParc:UPI0001DDA8F1,UniRef:UniRef100_UPI0001DDA8F1,UniRef:UniRef50_Q2FZD5,UniRef:UniRef90_Q2FZD5
contig_1	Pyrodigal	gene	1107637	1109349	.	+	.	ID=GCA000144955_01046_gene;locus_tag=GCA000144955_01046;gene=polX
contig_1	Pyrodigal	CDS	1107637	1109349	.	+	0	ID=GCA000144955_01046;Name=DNA polymerase/3'-5' exonuclease PolX;locus_tag=GCA000144955_01046;product=DNA polymerase/3'-5' exonuclease PolX;Dbxref=GO:0003677,GO:0003887,GO:0006281;gene=polX;Parent=GCA000144955_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1796,COG:L,RefSeq:WP_000161957.1,SO:0001217,UniParc:UPI0001DDA8F2,UniRef:UniRef100_UPI0001DDA8F2,UniRef:UniRef50_A0A0U1MIQ0,UniRef:UniRef90_A0A0U1MIQ0
contig_1	Pyrodigal	gene	1109359	1111707	.	+	.	ID=GCA000144955_01047_gene;locus_tag=GCA000144955_01047;gene=mutS2
contig_1	Pyrodigal	CDS	1109359	1111707	.	+	0	ID=GCA000144955_01047;Name=endonuclease MutS2;locus_tag=GCA000144955_01047;product=endonuclease MutS2;Dbxref=GO:0004519,GO:0005524,GO:0006259,GO:0006298,GO:0016887,GO:0019843,GO:0030983,GO:0045910,GO:0140664;gene=mutS2;Parent=GCA000144955_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1193,COG:J,KEGG:K07456,RefSeq:WP_001249296.1,SO:0001217,UniParc:UPI0001DDA8F3,UniRef:UniRef100_UPI0001DDA8F3,UniRef:UniRef50_Q2FZD3,UniRef:UniRef90_Q2FZD3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1111880	1112194	.	+	.	ID=GCA000144955_01048_gene;locus_tag=GCA000144955_01048;gene=trxA
contig_1	Pyrodigal	CDS	1111880	1112194	.	+	0	ID=GCA000144955_01048;Name=thioredoxin;locus_tag=GCA000144955_01048;product=thioredoxin;Dbxref=GO:0005829,GO:0015035,GO:0045454;gene=trxA;Parent=GCA000144955_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_001018928.1,SO:0001217,UniParc:UPI00000D78B6,UniRef:UniRef100_Q2FZD2,UniRef:UniRef50_P14949,UniRef:UniRef90_Q2FZD2
contig_1	Pyrodigal	gene	1112518	1114299	.	+	.	ID=GCA000144955_01049_gene;locus_tag=GCA000144955_01049;gene=uvrC
contig_1	Pyrodigal	CDS	1112518	1114299	.	+	0	ID=GCA000144955_01049;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000144955_01049;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432;gene=uvrC;Parent=GCA000144955_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_000390536.1,SO:0001217,UniParc:UPI0001DDA8F4,UniRef:UniRef100_UPI0001DDA8F4,UniRef:UniRef50_Q8DQQ9,UniRef:UniRef90_Q2FZD0
contig_1	Pyrodigal	gene	1114623	1115237	.	+	.	ID=GCA000144955_01050_gene;locus_tag=GCA000144955_01050;gene=sdhC
contig_1	Pyrodigal	CDS	1114623	1115237	.	+	0	ID=GCA000144955_01050;Name=succinate dehydrogenase%2C cytochrome b556 subunit;locus_tag=GCA000144955_01050;product=succinate dehydrogenase%2C cytochrome b556 subunit;Dbxref=GO:0000104,GO:0006099,GO:0009055,GO:0045273;gene=sdhC;Parent=GCA000144955_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2009,RefSeq:WP_000079318.1,SO:0001217,UniParc:UPI0001DDA8F5,UniRef:UniRef100_UPI0001DDA8F5,UniRef:UniRef50_P08064,UniRef:UniRef90_A0A7U7JU09
contig_1	Pyrodigal	gene	1115289	1117055	.	+	.	ID=GCA000144955_01051_gene;locus_tag=GCA000144955_01051;gene=sdhA
contig_1	Pyrodigal	CDS	1115289	1117055	.	+	0	ID=GCA000144955_01051;Name=succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000144955_01051;product=succinate dehydrogenase flavoprotein subunit;gene=sdhA;Parent=GCA000144955_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,RefSeq:WP_000818278.1,SO:0001217,UniParc:UPI00000543F4,UniRef:UniRef100_Q2FZC8,UniRef:UniRef50_P08065,UniRef:UniRef90_A0AAE8PAN5
contig_1	Pyrodigal	gene	1117055	1117870	.	+	.	ID=GCA000144955_01052_gene;locus_tag=GCA000144955_01052;gene=sdhB
contig_1	Pyrodigal	CDS	1117055	1117870	.	+	0	ID=GCA000144955_01052;Name=succinate dehydrogenase iron-sulfur subunit;locus_tag=GCA000144955_01052;product=succinate dehydrogenase iron-sulfur subunit;Dbxref=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gene=sdhB;Parent=GCA000144955_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0479,RefSeq:WP_000139712.1,SO:0001217,UniParc:UPI00000543F3,UniRef:UniRef100_Q2FZC7,UniRef:UniRef50_P08066,UniRef:UniRef90_A0AAE8PBW8
contig_1	Pyrodigal	gene	1118111	1118911	.	+	.	ID=GCA000144955_01053_gene;locus_tag=GCA000144955_01053;gene=racE
contig_1	Pyrodigal	CDS	1118111	1118911	.	+	0	ID=GCA000144955_01053;Name=glutamate racemase;locus_tag=GCA000144955_01053;product=glutamate racemase;Dbxref=GO:0008152,GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=racE;Parent=GCA000144955_01053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_001039659.1,SO:0001217,UniParc:UPI00000543F2,UniRef:UniRef100_Q2FZC6,UniRef:UniRef50_Q6GHT5,UniRef:UniRef90_Q6GHT5;ec_number=5.1.1.3
contig_1	Pyrodigal	gene	1118923	1119510	.	+	.	ID=GCA000144955_01054_gene;locus_tag=GCA000144955_01054;gene=rdgB
contig_1	Pyrodigal	CDS	1118923	1119510	.	+	0	ID=GCA000144955_01054;Name=XTP/dITP diphosphatase;locus_tag=GCA000144955_01054;product=XTP/dITP diphosphatase;Dbxref=GO:0000166,GO:0005829,GO:0009117,GO:0009143,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872,GO:0047429;gene=rdgB;Parent=GCA000144955_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,KEGG:K01519,RefSeq:WP_000659312.1,SO:0001217,UniParc:UPI0001DDA8F6,UniRef:UniRef100_UPI0001DDA8F6,UniRef:UniRef50_Q8CSY5,UniRef:UniRef90_P64309;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	1119503	1120006	.	+	.	ID=GCA000144955_01055_gene;locus_tag=GCA000144955_01055;gene=yfcE
contig_1	Pyrodigal	CDS	1119503	1120006	.	+	0	ID=GCA000144955_01055;Name=YfcE family phosphodiesterase;locus_tag=GCA000144955_01055;product=YfcE family phosphodiesterase;gene=yfcE;Parent=GCA000144955_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07095,RefSeq:WP_000049478.1,SO:0001217,UniParc:UPI0001DDA8F7,UniRef:UniRef100_UPI0001DDA8F7,UniRef:UniRef50_Q2FZC4,UniRef:UniRef90_UPI0001DDA8F7
contig_1	Pyrodigal	gene	1120432	1120761	.	+	.	ID=GCA000144955_01056_gene;locus_tag=GCA000144955_01056;gene=ecb
contig_1	Pyrodigal	CDS	1120432	1120761	.	+	0	ID=GCA000144955_01056;Name=complement convertase inhibitor Ecb;locus_tag=GCA000144955_01056;product=complement convertase inhibitor Ecb;gene=ecb;Parent=GCA000144955_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000739209,RefSeq:WP_000739214.1,SO:0001217,UniParc:UPI0001DDA8F8,UniRef:UniRef100_A0A380DP56,UniRef:UniRef50_A0A3M8VBL4,UniRef:UniRef90_Q2FZC2
contig_1	Pyrodigal	gene	1121130	1121528	.	-	.	ID=GCA000144955_01057_gene;locus_tag=GCA000144955_01057
contig_1	Pyrodigal	CDS	1121130	1121528	.	-	0	ID=GCA000144955_01057;Name=FPRL1 inhibitory protein FLIPr;locus_tag=GCA000144955_01057;product=FPRL1 inhibitory protein FLIPr;Parent=GCA000144955_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14203,RefSeq:WP_000739583.1,SO:0001217,UniParc:UPI0001DDA8F9,UniRef:UniRef100_UPI0001DDA8F9,UniRef:UniRef50_A6QG57,UniRef:UniRef90_UPI0001DDA8F9
contig_1	Pyrodigal	gene	1122199	1122705	.	+	.	ID=GCA000144955_01058_gene;locus_tag=GCA000144955_01058
contig_1	Pyrodigal	CDS	1122199	1122705	.	+	0	ID=GCA000144955_01058;Name=Membrane protein;locus_tag=GCA000144955_01058;product=Membrane protein;Parent=GCA000144955_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000584396.1,SO:0001217,UniParc:UPI0001C0B89E,UniRef:UniRef100_A0A8G2M7V5,UniRef:UniRef50_Q2FZB9,UniRef:UniRef90_Q2FZB9
contig_1	Pyrodigal	gene	1122964	1123461	.	+	.	ID=GCA000144955_01059_gene;locus_tag=GCA000144955_01059;gene=efb
contig_1	Pyrodigal	CDS	1122964	1123461	.	+	0	ID=GCA000144955_01059;Name=complement convertase inhibitor Efb;locus_tag=GCA000144955_01059;product=complement convertase inhibitor Efb;Dbxref=GO:0001848,GO:0005615;gene=efb;Parent=GCA000144955_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000791587,RefSeq:WP_000791576.1,SO:0001217,UniParc:UPI0001DDA8FA,UniRef:UniRef100_UPI0001DDA8FA,UniRef:UniRef50_P68799,UniRef:UniRef90_P68799
contig_1	Pyrodigal	gene	1123613	1123963	.	+	.	ID=GCA000144955_01060_gene;locus_tag=GCA000144955_01060
contig_1	Pyrodigal	CDS	1123613	1123963	.	+	0	ID=GCA000144955_01060;Name=Staphylococcal complement inhibitor;locus_tag=GCA000144955_01060;product=Staphylococcal complement inhibitor;Parent=GCA000144955_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669540.1,SO:0001217,UniParc:UPI0001DDA8FB,UniRef:UniRef100_UPI0001DDA8FB,UniRef:UniRef50_A0A0U1MK84,UniRef:UniRef90_A0A0U1MK84
contig_1	Pyrodigal	gene	1124198	1124383	.	-	.	ID=GCA000144955_01061_gene;locus_tag=GCA000144955_01061
contig_1	Pyrodigal	CDS	1124198	1124383	.	-	0	ID=GCA000144955_01061;Name=DUF4044 domain-containing protein;locus_tag=GCA000144955_01061;product=DUF4044 domain-containing protein;Parent=GCA000144955_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001032819.1,SO:0001217,UniParc:UPI0001DDA8FC,UniRef:UniRef100_UPI0001DDA8FC,UniRef:UniRef50_Q2G1X3,UniRef:UniRef90_Q2G1X3
contig_1	Pyrodigal	gene	1125005	1125238	.	-	.	ID=GCA000144955_01062_gene;locus_tag=GCA000144955_01062
contig_1	Pyrodigal	CDS	1125005	1125238	.	-	0	ID=GCA000144955_01062;Name=Phage protein;locus_tag=GCA000144955_01062;product=Phage protein;Parent=GCA000144955_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000231632.1,SO:0001217,UniParc:UPI00000543E6,UniRef:UniRef100_Q2G1X1,UniRef:UniRef50_Q2G1X1,UniRef:UniRef90_Q2G1X1
contig_1	Pyrodigal	gene	1125715	1126674	.	-	.	ID=GCA000144955_01063_gene;locus_tag=GCA000144955_01063;gene=hly
contig_1	Pyrodigal	CDS	1125715	1126674	.	-	0	ID=GCA000144955_01063;Name=Alpha-Hemolysin precursor;locus_tag=GCA000144955_01063;product=Alpha-Hemolysin precursor;Dbxref=GO:0005576,GO:0042802,GO:0051715,GO:0090729;gene=hly;Parent=GCA000144955_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11032,RefSeq:WP_000857485.1,SO:0001217,UniParc:UPI00000D9D88,UniRef:UniRef100_Q6SV31,UniRef:UniRef50_P09616,UniRef:UniRef90_P09616,VFDB:VFC0235,VFDB:VFG001293
contig_1	Pyrodigal	gene	1127476	1127676	.	+	.	ID=GCA000144955_01064_gene;locus_tag=GCA000144955_01064
contig_1	Pyrodigal	CDS	1127476	1127676	.	+	0	ID=GCA000144955_01064;Name=DNA-binding protein;locus_tag=GCA000144955_01064;product=DNA-binding protein;Parent=GCA000144955_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000137786.1,SO:0001217,UniParc:UPI0001C0B8A4,UniRef:UniRef100_A0A8G2HZ92,UniRef:UniRef50_Q2FZB4,UniRef:UniRef90_A0A0U1MK90
contig_1	Infernal	gene	1127710	1127969	.	-	.	ID=GCA000144955_01065_gene;locus_tag=GCA000144955_01065;gene=S35
contig_1	Infernal	ncRNA	1127710	1127969	1.3e-13	-	.	ID=GCA000144955_01065;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01065;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01065_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1128076	1128792	.	-	.	ID=GCA000144955_01066_gene;locus_tag=GCA000144955_01066
contig_1	Pyrodigal	CDS	1128076	1128792	.	-	0	ID=GCA000144955_01066;Name=superantigen-like protein SSL12;locus_tag=GCA000144955_01066;product=superantigen-like protein SSL12;Parent=GCA000144955_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001232141.1,SO:0001217,UniParc:UPI0001DDA8FD,UniRef:UniRef100_UPI0001DDA8FD,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A5S9EUY3
contig_1	Pyrodigal	gene	1128901	1129578	.	-	.	ID=GCA000144955_01067_gene;locus_tag=GCA000144955_01067
contig_1	Pyrodigal	CDS	1128901	1129578	.	-	0	ID=GCA000144955_01067;Name=superantigen-like protein SSL13;locus_tag=GCA000144955_01067;product=superantigen-like protein SSL13;Parent=GCA000144955_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580471.1,SO:0001217,UniParc:UPI0001DDA8FE,UniRef:UniRef100_UPI0001DDA8FE,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A5S9C3W2
contig_1	Pyrodigal	gene	1129735	1130460	.	-	.	ID=GCA000144955_01068_gene;locus_tag=GCA000144955_01068
contig_1	Pyrodigal	CDS	1129735	1130460	.	-	0	ID=GCA000144955_01068;Name=superantigen-like protein SSL14;locus_tag=GCA000144955_01068;product=superantigen-like protein SSL14;Parent=GCA000144955_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000739536.1,SO:0001217,UniParc:UPI0001DDA8FF,UniRef:UniRef100_UPI0001DDA8FF,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_Q2FZB1
contig_1	Pyrodigal	gene	1130898	1131899	.	+	.	ID=GCA000144955_01069_gene;locus_tag=GCA000144955_01069;gene=argF
contig_1	Pyrodigal	CDS	1130898	1131899	.	+	0	ID=GCA000144955_01069;Name=ornithine carbamoyltransferase;locus_tag=GCA000144955_01069;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000144955_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000793620.1,SO:0001217,UniParc:UPI0001DDA900,UniRef:UniRef100_UPI0001DDA900,UniRef:UniRef50_P08308,UniRef:UniRef90_P0C0N0;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	1131919	1132854	.	+	.	ID=GCA000144955_01070_gene;locus_tag=GCA000144955_01070;gene=arcC
contig_1	Pyrodigal	CDS	1131919	1132854	.	+	0	ID=GCA000144955_01070;Name=carbamate kinase;locus_tag=GCA000144955_01070;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000144955_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,SO:0001217,UniParc:UPI0001C11D77,UniRef:UniRef100_A0A7I8NMZ0,UniRef:UniRef50_Q2FZA9,UniRef:UniRef90_Q2FZA9;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	1133025	1134581	.	+	.	ID=GCA000144955_01071_gene;locus_tag=GCA000144955_01071;gene=yfcC
contig_1	Pyrodigal	CDS	1133025	1134581	.	+	0	ID=GCA000144955_01071;Name=ArcD-like protein;locus_tag=GCA000144955_01071;product=ArcD-like protein;gene=yfcC;Parent=GCA000144955_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,RefSeq:WP_000432266.1,SO:0001217,UniParc:UPI0001DDA902,UniRef:UniRef100_UPI0001DDA902,UniRef:UniRef50_P44023,UniRef:UniRef90_H9BJB2
contig_1	Pyrodigal	gene	1134889	1135116	.	+	.	ID=GCA000144955_01072_gene;locus_tag=GCA000144955_01072;gene=elxI1
contig_1	Pyrodigal	CDS	1134889	1135116	.	+	0	ID=GCA000144955_01072;Name=epilancin biosynthesis-related protein ElxI1;locus_tag=GCA000144955_01072;product=epilancin biosynthesis-related protein ElxI1;gene=elxI1;Parent=GCA000144955_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000149428.1,SO:0001217,UniParc:UPI0001DDA903,UniRef:UniRef100_UPI0001DDA903,UniRef:UniRef50_I6ZHL4,UniRef:UniRef90_Q2FZA7
contig_1	Pyrodigal	gene	1135432	1136379	.	-	.	ID=GCA000144955_01073_gene;locus_tag=GCA000144955_01073;gene=tehA
contig_1	Pyrodigal	CDS	1135432	1136379	.	-	0	ID=GCA000144955_01073;Name=Permease;locus_tag=GCA000144955_01073;product=Permease;gene=tehA;Parent=GCA000144955_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1275,COG:V,KEGG:K11041,RefSeq:WP_001239295.1,SO:0001217,UniParc:UPI0001DDA904,UniRef:UniRef100_UPI0001DDA904,UniRef:UniRef50_Q2FZA6,UniRef:UniRef90_Q2FZA6
contig_1	tRNAscan-SE	gene	1137422	1137495	.	-	.	ID=GCA000144955_01074_gene;locus_tag=GCA000144955_01074;gene=trnR
contig_1	tRNAscan-SE	tRNA	1137422	1137495	.	-	.	ID=GCA000144955_01074;Name=tRNA-Arg(tct);locus_tag=GCA000144955_01074;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000144955_01074_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	1137859	1137993	.	+	.	ID=GCA000144955_01075_gene;locus_tag=GCA000144955_01075
contig_1	Pyrodigal	CDS	1137859	1137993	.	+	0	ID=GCA000144955_01075;Name=Beta-class phenol-soluble modulin;locus_tag=GCA000144955_01075;product=Beta-class phenol-soluble modulin;Parent=GCA000144955_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20337,RefSeq:WP_000398672.1,SO:0001217,UniParc:UPI00000D9D8F,UniRef:UniRef100_Q2FZA4,UniRef:UniRef50_P11697,UniRef:UniRef90_Q2FZA4
contig_1	Pyrodigal	gene	1138050	1138184	.	+	.	ID=GCA000144955_01076_gene;locus_tag=GCA000144955_01076
contig_1	Pyrodigal	CDS	1138050	1138184	.	+	0	ID=GCA000144955_01076;Name=Beta-class phenol-soluble modulin;locus_tag=GCA000144955_01076;product=Beta-class phenol-soluble modulin;Parent=GCA000144955_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20337,RefSeq:WP_000147103.1,SO:0001217,UniParc:UPI00000543D5,UniRef:UniRef100_Q2FZA3,UniRef:UniRef50_P11697,UniRef:UniRef90_Q2FZA3
contig_1	Pyrodigal	gene	1138317	1139003	.	+	.	ID=GCA000144955_01077_gene;locus_tag=GCA000144955_01077;gene=yigB
contig_1	Pyrodigal	CDS	1138317	1139003	.	+	0	ID=GCA000144955_01077;Name=YjjG family noncanonical pyrimidine nucleotidase;locus_tag=GCA000144955_01077;product=YjjG family noncanonical pyrimidine nucleotidase;Dbxref=GO:0008253;gene=yigB;Parent=GCA000144955_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,SO:0001217,UniRef:UniRef50_Q2FZA2,UniRef:UniRef90_Q2FZA2;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	1139111	1139551	.	-	.	ID=GCA000144955_01078_gene;locus_tag=GCA000144955_01078
contig_1	Pyrodigal	CDS	1139111	1139551	.	-	0	ID=GCA000144955_01078;Name=N-acetyltransferase;locus_tag=GCA000144955_01078;product=N-acetyltransferase;Dbxref=GO:0008080,GO:0016747;Parent=GCA000144955_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001289711.1,SO:0001217,UniParc:UPI00000543D3,UniRef:UniRef100_Q99UT4,UniRef:UniRef50_Q8CSY0,UniRef:UniRef90_Q99UT4;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1139746	1141359	.	+	.	ID=GCA000144955_01079_gene;locus_tag=GCA000144955_01079;gene=bshC
contig_1	Pyrodigal	CDS	1139746	1141359	.	+	0	ID=GCA000144955_01079;Name=bacillithiol biosynthesis cysteine-adding enzyme BshC;locus_tag=GCA000144955_01079;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;Dbxref=GO:0003824,GO:0016874,GO:0071793;gene=bshC;Parent=GCA000144955_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4365,COG:Q,KEGG:K22136,RefSeq:WP_000340450.1,SO:0001217,UniParc:UPI0001DDA906,UniRef:UniRef100_UPI0001DDA906,UniRef:UniRef50_Q2FZ98,UniRef:UniRef90_Q2FZ98;ec_number=6.-.-.-
contig_1	Pyrodigal	gene	1141503	1141934	.	+	.	ID=GCA000144955_01080_gene;locus_tag=GCA000144955_01080;gene=mraZ
contig_1	Pyrodigal	CDS	1141503	1141934	.	+	0	ID=GCA000144955_01080;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000144955_01080;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000144955_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_000480800.1,SO:0001217,UniParc:UPI00000543CE,UniRef:UniRef100_Q2FZ97,UniRef:UniRef50_Q8Y5L6,UniRef:UniRef90_Q2FZ97
contig_1	Pyrodigal	gene	1141950	1142885	.	+	.	ID=GCA000144955_01081_gene;locus_tag=GCA000144955_01081;gene=rsmH
contig_1	Pyrodigal	CDS	1141950	1142885	.	+	0	ID=GCA000144955_01081;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000144955_01081;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000144955_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,KEGG:K03438,RefSeq:WP_000468380.1,SO:0001217,UniParc:UPI0001DDA907,UniRef:UniRef100_UPI0001DDA907,UniRef:UniRef50_Q07876,UniRef:UniRef90_P60393;ec_number=2.1.1.199
contig_1	Pyrodigal	gene	1142899	1143300	.	+	.	ID=GCA000144955_01082_gene;locus_tag=GCA000144955_01082;gene=ftsL
contig_1	Pyrodigal	CDS	1142899	1143300	.	+	0	ID=GCA000144955_01082;Name=cell division protein FtsL;locus_tag=GCA000144955_01082;product=cell division protein FtsL;Dbxref=GO:0000910,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=ftsL;Parent=GCA000144955_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4839,COG:D,KEGG:K03586,RefSeq:WP_000257598.1,SO:0001217,UniParc:UPI00000338FA,UniRef:UniRef100_Q2FZ95,UniRef:UniRef50_Q2FZ95,UniRef:UniRef90_Q2FZ95
contig_1	Pyrodigal	gene	1143281	1145515	.	+	.	ID=GCA000144955_01083_gene;locus_tag=GCA000144955_01083;gene=ftsI
contig_1	Pyrodigal	CDS	1143281	1145515	.	+	0	ID=GCA000144955_01083;Name=Cell division protein FtsI (Peptidoglycan synthetase);locus_tag=GCA000144955_01083;product=Cell division protein FtsI (Peptidoglycan synthetase);gene=ftsI;Parent=GCA000144955_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2815,COG:M,KEGG:K12552,RefSeq:WP_001118652.1,SO:0001217,UniParc:UPI00000CA98D,UniRef:UniRef100_A0A7Z7QZ17,UniRef:UniRef50_A0A640MVC3,UniRef:UniRef90_A0A218M1I3;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1145807	1146772	.	+	.	ID=GCA000144955_01084_gene;locus_tag=GCA000144955_01084;gene=mraY
contig_1	Pyrodigal	CDS	1145807	1146772	.	+	0	ID=GCA000144955_01084;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000144955_01084;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000144955_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01000,RefSeq:WP_000578467.1,SO:0001217,UniParc:UPI0001DDAA91,UniRef:UniRef100_UPI0001DDAA91,UniRef:UniRef50_Q2FZ93,UniRef:UniRef90_Q8NX36;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	1146774	1148123	.	+	.	ID=GCA000144955_01085_gene;locus_tag=GCA000144955_01085;gene=murD
contig_1	Pyrodigal	CDS	1146774	1148123	.	+	0	ID=GCA000144955_01085;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000144955_01085;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000144955_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0771,COG:M,RefSeq:WP_000935999.1,SO:0001217,UniParc:UPI0001DDAA92,UniRef:UniRef100_UPI0001DDAA92,UniRef:UniRef50_Q2FZ92,UniRef:UniRef90_Q2FZ92;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	1148139	1149458	.	+	.	ID=GCA000144955_01086_gene;locus_tag=GCA000144955_01086;gene=divIB
contig_1	Pyrodigal	CDS	1148139	1149458	.	+	0	ID=GCA000144955_01086;Name=Cell division protein DivIB;locus_tag=GCA000144955_01086;product=Cell division protein DivIB;Dbxref=GO:0005886,GO:0032153,GO:0043093;gene=divIB;Parent=GCA000144955_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_000342203.1,SO:0001217,UniParc:UPI0001DDAA93,UniRef:UniRef100_UPI0001DDAA93,UniRef:UniRef50_Q2FZ91,UniRef:UniRef90_Q2FZ91
contig_1	Pyrodigal	gene	1149563	1150969	.	+	.	ID=GCA000144955_01087_gene;locus_tag=GCA000144955_01087;gene=ftsA
contig_1	Pyrodigal	CDS	1149563	1150969	.	+	0	ID=GCA000144955_01087;Name=cell division protein FtsA;locus_tag=GCA000144955_01087;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0005524,GO:0009898,GO:0032153,GO:0043093;gene=ftsA;Parent=GCA000144955_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_000391032.1,SO:0001217,UniParc:UPI0001AE84FC,UniRef:UniRef100_A0A2S6DF60,UniRef:UniRef50_O07325,UniRef:UniRef90_O07325
contig_1	Pyrodigal	gene	1151002	1152174	.	+	.	ID=GCA000144955_01088_gene;locus_tag=GCA000144955_01088;gene=ftsZ
contig_1	Pyrodigal	CDS	1151002	1152174	.	+	0	ID=GCA000144955_01088;Name=cell division protein FtsZ;locus_tag=GCA000144955_01088;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258;gene=ftsZ;Parent=GCA000144955_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_000888997.1,SO:0001217,UniParc:UPI00000543C7,UniRef:UniRef100_Q2FZ89,UniRef:UniRef50_Q2FZ89,UniRef:UniRef90_Q2FZ89
contig_1	Pyrodigal	gene	1152434	1153225	.	+	.	ID=GCA000144955_01089_gene;locus_tag=GCA000144955_01089;gene=pgeF
contig_1	Pyrodigal	CDS	1152434	1153225	.	+	0	ID=GCA000144955_01089;Name=peptidoglycan editing factor PgeF;locus_tag=GCA000144955_01089;product=peptidoglycan editing factor PgeF;Dbxref=GO:0004000,GO:0005507,GO:0016491,GO:0017061,GO:0046936;gene=pgeF;Parent=GCA000144955_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_000999339.1,SO:0001217,UniParc:UPI00005FE430,UniRef:UniRef100_UPI00005FE430,UniRef:UniRef50_Q49WW9,UniRef:UniRef90_Q99US8;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	1153249	1153917	.	+	.	ID=GCA000144955_01090_gene;locus_tag=GCA000144955_01090;gene=yggS
contig_1	Pyrodigal	CDS	1153249	1153917	.	+	0	ID=GCA000144955_01090;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA000144955_01090;product=Pyridoxal phosphate homeostasis protein;gene=yggS;Parent=GCA000144955_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0325,COG:H,RefSeq:WP_001548498.1,SO:0001217,UniParc:UPI0000696C16,UniRef:UniRef100_Q2FZ87,UniRef:UniRef50_U2FRM0,UniRef:UniRef90_Q9ZHA3
contig_1	Pyrodigal	gene	1153914	1154477	.	+	.	ID=GCA000144955_01091_gene;locus_tag=GCA000144955_01091;gene=sepF
contig_1	Pyrodigal	CDS	1153914	1154477	.	+	0	ID=GCA000144955_01091;Name=Cell division protein SepF;locus_tag=GCA000144955_01091;product=Cell division protein SepF;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=sepF;Parent=GCA000144955_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1799,COG:D,RefSeq:WP_000018608.1,SO:0001217,UniParc:UPI00000D7683,UniRef:UniRef100_Q2FZ86,UniRef:UniRef50_Q2FZ86,UniRef:UniRef90_Q2FZ86
contig_1	Pyrodigal	gene	1154489	1154779	.	+	.	ID=GCA000144955_01092_gene;locus_tag=GCA000144955_01092;gene=yggT
contig_1	Pyrodigal	CDS	1154489	1154779	.	+	0	ID=GCA000144955_01092;Name=YggT family protein;locus_tag=GCA000144955_01092;product=YggT family protein;gene=yggT;Parent=GCA000144955_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,RefSeq:WP_000354112.1,SO:0001217,UniParc:UPI0001AE8542,UniRef:UniRef100_A0A6M1FB22,UniRef:UniRef50_Q2FZ85,UniRef:UniRef90_Q2FZ85
contig_1	Pyrodigal	gene	1154862	1155668	.	+	.	ID=GCA000144955_01093_gene;locus_tag=GCA000144955_01093;gene=ylmH
contig_1	Pyrodigal	CDS	1154862	1155668	.	+	0	ID=GCA000144955_01093;Name=RNA-binding S4 domain-containing protein;locus_tag=GCA000144955_01093;product=RNA-binding S4 domain-containing protein;gene=ylmH;Parent=GCA000144955_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2302,COG:J,RefSeq:WP_000232497.1,SO:0001217,UniParc:UPI0001C0B8B3,UniRef:UniRef100_A0A0D1I619,UniRef:UniRef50_Q2FZ84,UniRef:UniRef90_Q2FZ84
contig_1	Pyrodigal	gene	1155692	1156321	.	+	.	ID=GCA000144955_01094_gene;locus_tag=GCA000144955_01094;gene=divIVA
contig_1	Pyrodigal	CDS	1155692	1156321	.	+	0	ID=GCA000144955_01094;Name=DivIVA domain-containing protein;locus_tag=GCA000144955_01094;product=DivIVA domain-containing protein;gene=divIVA;Parent=GCA000144955_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001117072.1,SO:0001217,UniParc:UPI0001DDAA94,UniRef:UniRef100_UPI0001DDAA94,UniRef:UniRef50_Q2FZ83,UniRef:UniRef90_Q2FZ83
contig_1	Pyrodigal	gene	1156539	1159292	.	+	.	ID=GCA000144955_01095_gene;locus_tag=GCA000144955_01095;gene=ileS
contig_1	Pyrodigal	CDS	1156539	1159292	.	+	0	ID=GCA000144955_01095;Name=isoleucine--tRNA ligase;locus_tag=GCA000144955_01095;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000144955_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_000384676.1,SO:0001217,UniParc:UPI0001DDAA95,UniRef:UniRef100_UPI0001DDAA95,UniRef:UniRef50_P41972,UniRef:UniRef90_P41972;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	1159583	1160380	.	+	.	ID=GCA000144955_01096_gene;locus_tag=GCA000144955_01096;gene=catE
contig_1	Pyrodigal	CDS	1159583	1160380	.	+	0	ID=GCA000144955_01096;Name=Glyoxalase;locus_tag=GCA000144955_01096;product=Glyoxalase;gene=catE;Parent=GCA000144955_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_000274850.1,SO:0001217,UniParc:UPI00003B15D3,UniRef:UniRef100_A0A0D1JNZ5,UniRef:UniRef50_A0AAP7IFI2,UniRef:UniRef90_A0A0D1JNZ5
contig_1	Pyrodigal	gene	1160441	1160779	.	-	.	ID=GCA000144955_01097_gene;locus_tag=GCA000144955_01097
contig_1	Pyrodigal	CDS	1160441	1160779	.	-	0	ID=GCA000144955_01097;Name=transposase;locus_tag=GCA000144955_01097;product=transposase;Parent=GCA000144955_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5S9C4G0,UniRef:UniRef90_UPI00069EEB7F
contig_1	Pyrodigal	gene	1160917	1161102	.	-	.	ID=GCA000144955_01098_gene;locus_tag=GCA000144955_01098
contig_1	Pyrodigal	CDS	1160917	1161102	.	-	0	ID=GCA000144955_01098;Name=hypothetical protein;locus_tag=GCA000144955_01098;product=hypothetical protein;Parent=GCA000144955_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A6K3TG32,UniRef:UniRef90_UPI000A532B71
contig_1	Pyrodigal	gene	1161232	1161360	.	-	.	ID=GCA000144955_01099_gene;locus_tag=GCA000144955_01099
contig_1	Pyrodigal	CDS	1161232	1161360	.	-	0	ID=GCA000144955_01099;Name=hypothetical protein;locus_tag=GCA000144955_01099;product=hypothetical protein;Parent=GCA000144955_01099_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Infernal	gene	1161382	1161600	.	+	.	ID=GCA000144955_01100_gene;locus_tag=GCA000144955_01100;gene=tsr24
contig_1	Infernal	ncRNA	1161382	1161600	3.7e-26	+	.	ID=GCA000144955_01100;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_01100;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_01100_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1161859	1162350	.	+	.	ID=GCA000144955_01101_gene;locus_tag=GCA000144955_01101;gene=lspA
contig_1	Pyrodigal	CDS	1161859	1162350	.	+	0	ID=GCA000144955_01101;Name=signal peptidase II;locus_tag=GCA000144955_01101;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA000144955_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_000549208.1,SO:0001217,UniParc:UPI00003B15D4,UniRef:UniRef100_Q6GHN9,UniRef:UniRef50_Q8CPK0,UniRef:UniRef90_Q6GHN9;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	1162350	1163267	.	+	.	ID=GCA000144955_01102_gene;locus_tag=GCA000144955_01102;gene=rluA
contig_1	Pyrodigal	CDS	1162350	1163267	.	+	0	ID=GCA000144955_01102;Name=Pseudouridine synthase;locus_tag=GCA000144955_01102;product=Pseudouridine synthase;gene=rluA;Parent=GCA000144955_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_000451303.1,SO:0001217,UniParc:UPI0001C11D85,UniRef:UniRef100_A0A2S6DRV4,UniRef:UniRef50_A5I1V5,UniRef:UniRef90_A0A380EGR6;ec_number=5.4.99.23
contig_1	Pyrodigal	gene	1163668	1164195	.	+	.	ID=GCA000144955_01103_gene;locus_tag=GCA000144955_01103;gene=pyrR
contig_1	Pyrodigal	CDS	1163668	1164195	.	+	0	ID=GCA000144955_01103;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA000144955_01103;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0003723,GO:0004845,GO:0006353;gene=pyrR;Parent=GCA000144955_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2065,COG:F,KEGG:K02825,RefSeq:WP_000003870.1,SO:0001217,UniParc:UPI00000543B9,UniRef:UniRef100_Q2FZ77,UniRef:UniRef50_Q9K9V4,UniRef:UniRef90_Q2FZ77;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	1164413	1165720	.	+	.	ID=GCA000144955_01104_gene;locus_tag=GCA000144955_01104;gene=uraA
contig_1	Pyrodigal	CDS	1164413	1165720	.	+	0	ID=GCA000144955_01104;Name=Uracil permease%2C putative;locus_tag=GCA000144955_01104;product=Uracil permease%2C putative;gene=uraA;Parent=GCA000144955_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_001178613.1,SO:0001217,UniParc:UPI0001B3B28F,UniRef:UniRef100_A0A0U1MIP5,UniRef:UniRef50_P39766,UniRef:UniRef90_Q2FZ76
contig_1	Pyrodigal	gene	1165748	1166629	.	+	.	ID=GCA000144955_01105_gene;locus_tag=GCA000144955_01105;gene=pyrB
contig_1	Pyrodigal	CDS	1165748	1166629	.	+	0	ID=GCA000144955_01105;Name=aspartate carbamoyltransferase catalytic subunit;locus_tag=GCA000144955_01105;product=aspartate carbamoyltransferase catalytic subunit;Dbxref=GO:0004070,GO:0005829,GO:0006207,GO:0006520,GO:0016597,GO:0044205;gene=pyrB;Parent=GCA000144955_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0540,COG:F,RefSeq:WP_001016166.1,SO:0001217,UniParc:UPI00000543B7,UniRef:UniRef100_Q2FZ75,UniRef:UniRef50_P05654,UniRef:UniRef90_Q2FZ75;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	1166644	1167921	.	+	.	ID=GCA000144955_01106_gene;locus_tag=GCA000144955_01106;gene=pyrC
contig_1	Pyrodigal	CDS	1166644	1167921	.	+	0	ID=GCA000144955_01106;Name=dihydroorotase;locus_tag=GCA000144955_01106;product=dihydroorotase;Dbxref=GO:0004038,GO:0004151,GO:0005737,GO:0006145,GO:0006221,GO:0008270,GO:0044205,GO:0046872;gene=pyrC;Parent=GCA000144955_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0044,COG:F,SO:0001217,UniRef:UniRef50_Q81WF0,UniRef:UniRef90_Q5HGN1;ec_number=3.5.2.3
contig_1	Pyrodigal	gene	1167923	1169023	.	+	.	ID=GCA000144955_01107_gene;locus_tag=GCA000144955_01107;gene=carA
contig_1	Pyrodigal	CDS	1167923	1169023	.	+	0	ID=GCA000144955_01107;Name=carbamoyl phosphate synthase small subunit;locus_tag=GCA000144955_01107;product=carbamoyl phosphate synthase small subunit;Dbxref=GO:0004088,GO:0004359,GO:0005524,GO:0006207,GO:0006526,GO:0006541,GO:0044205;gene=carA;Parent=GCA000144955_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0505,COG:EF,RefSeq:WP_001190912.1,SO:0001217,UniParc:UPI0001DDAA97,UniRef:UniRef100_UPI0001DDAA97,UniRef:UniRef50_P25993,UniRef:UniRef90_Q5HGN0;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1169016	1172189	.	+	.	ID=GCA000144955_01108_gene;locus_tag=GCA000144955_01108;gene=carB
contig_1	Pyrodigal	CDS	1169016	1172189	.	+	0	ID=GCA000144955_01108;Name=carbamoyl-phosphate synthase large subunit;locus_tag=GCA000144955_01108;product=carbamoyl-phosphate synthase large subunit;Dbxref=GO:0004087,GO:0004088,GO:0005524,GO:0005737,GO:0006526,GO:0006541,GO:0008152,GO:0044205,GO:0046872;gene=carB;Parent=GCA000144955_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0458,COG:EF,KEGG:K01955,RefSeq:WP_001126270.1,SO:0001217,UniParc:UPI0001DDAA98,UniRef:UniRef100_UPI0001DDAA98,UniRef:UniRef50_P25994,UniRef:UniRef90_P63739;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1172299	1172991	.	+	.	ID=GCA000144955_01109_gene;locus_tag=GCA000144955_01109;gene=pyrF
contig_1	Pyrodigal	CDS	1172299	1172991	.	+	0	ID=GCA000144955_01109;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000144955_01109;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0005829,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA000144955_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,RefSeq:WP_000654069.1,SO:0001217,UniParc:UPI0001DDAA99,UniRef:UniRef100_UPI0001DDAA99,UniRef:UniRef50_P0CB75,UniRef:UniRef90_Q2FZ71;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1172991	1173602	.	+	.	ID=GCA000144955_01110_gene;locus_tag=GCA000144955_01110;gene=pyrE
contig_1	Pyrodigal	CDS	1172991	1173602	.	+	0	ID=GCA000144955_01110;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000144955_01110;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0019856,GO:0044205;gene=pyrE;Parent=GCA000144955_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_001040248.1,SO:0001217,UniParc:UPI0000132CD8,UniRef:UniRef100_P65916,UniRef:UniRef50_P58856,UniRef:UniRef90_P65916;ec_number=2.4.2.10
contig_1	Pyrodigal	gene	1173632	1173844	.	+	.	ID=GCA000144955_01111_gene;locus_tag=GCA000144955_01111
contig_1	Pyrodigal	CDS	1173632	1173844	.	+	0	ID=GCA000144955_01111;Name=hypothetical protein;locus_tag=GCA000144955_01111;product=hypothetical protein;Parent=GCA000144955_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000998554.1,SO:0001217,UniParc:UPI0001DDAA9A,UniRef:UniRef100_UPI0001DDAA9A,UniRef:UniRef50_A0A2K4ADL6,UniRef:UniRef90_Q2FZ69
contig_1	Pyrodigal	gene	1174281	1174682	.	+	.	ID=GCA000144955_01112_gene;locus_tag=GCA000144955_01112
contig_1	Pyrodigal	CDS	1174281	1174682	.	+	0	ID=GCA000144955_01112;Name=PhnB-like domain-containing protein;locus_tag=GCA000144955_01112;product=PhnB-like domain-containing protein;Parent=GCA000144955_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3865,COG:R,RefSeq:WP_000354184.1,SO:0001217,UniParc:UPI00000543B0,UniRef:UniRef100_Q2G1U2,UniRef:UniRef50_Q2G1U2,UniRef:UniRef90_Q2G1U2
contig_1	Infernal	gene	1174817	1174875	.	+	.	ID=GCA000144955_01113_gene;locus_tag=GCA000144955_01113;gene=sau-5949
contig_1	Infernal	ncRNA	1174817	1174875	8.3e-13	+	.	ID=GCA000144955_01113;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000144955_01113;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000144955_01113_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1175145	1176842	.	-	.	ID=GCA000144955_01114_gene;locus_tag=GCA000144955_01114;gene=rqcH
contig_1	Pyrodigal	CDS	1175145	1176842	.	-	0	ID=GCA000144955_01114;Name=Rqc2-like protein RqcH;locus_tag=GCA000144955_01114;product=Rqc2-like protein RqcH;gene=rqcH;Parent=GCA000144955_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1293,COG:JO,RefSeq:WP_000312782.1,SO:0001217,UniParc:UPI0001DDAA9B,UniRef:UniRef100_UPI0001DDAA9B,UniRef:UniRef50_Q5HPY2,UniRef:UniRef90_A0A0U1MIQ6
contig_1	Pyrodigal	gene	1177117	1177740	.	+	.	ID=GCA000144955_01115_gene;locus_tag=GCA000144955_01115;gene=gmk
contig_1	Pyrodigal	CDS	1177117	1177740	.	+	0	ID=GCA000144955_01115;Name=guanylate kinase;locus_tag=GCA000144955_01115;product=guanylate kinase;Dbxref=GO:0004385,GO:0005524,GO:0005829,GO:0006163;gene=gmk;Parent=GCA000144955_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0194,COG:F,RefSeq:WP_000368225.1,SO:0001217,UniParc:UPI00003B15DD,UniRef:UniRef100_Q6GHM6,UniRef:UniRef50_O34328,UniRef:UniRef90_P0C0M9;ec_number=2.7.4.8
contig_1	Pyrodigal	gene	1177740	1177958	.	+	.	ID=GCA000144955_01116_gene;locus_tag=GCA000144955_01116;gene=rpoZ
contig_1	Pyrodigal	CDS	1177740	1177958	.	+	0	ID=GCA000144955_01116;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA000144955_01116;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351;gene=rpoZ;Parent=GCA000144955_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_000933956.1,SO:0001217,UniParc:UPI00000543AD,UniRef:UniRef100_Q2G1T9,UniRef:UniRef50_Q2G1T9,UniRef:UniRef90_Q2G1T9;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1178174	1179373	.	+	.	ID=GCA000144955_01117_gene;locus_tag=GCA000144955_01117;gene=coaBC
contig_1	Pyrodigal	CDS	1178174	1179373	.	+	0	ID=GCA000144955_01117;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000144955_01117;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941;gene=coaBC;Parent=GCA000144955_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_000722165.1,SO:0001217,UniParc:UPI00000D77D5,UniRef:UniRef100_Q2G268,UniRef:UniRef50_W4QPQ9,UniRef:UniRef90_Q2G268;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	1179373	1181781	.	+	.	ID=GCA000144955_01118_gene;locus_tag=GCA000144955_01118;gene=priA
contig_1	Pyrodigal	CDS	1179373	1181781	.	+	0	ID=GCA000144955_01118;Name=primosomal protein N';locus_tag=GCA000144955_01118;product=primosomal protein N';Dbxref=GO:0003678,GO:0006260,GO:0032508;gene=priA;Parent=GCA000144955_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1198,COG:L,RefSeq:WP_000560849.1,SO:0001217,UniParc:UPI0001DDAA9C,UniRef:UniRef100_UPI0001DDAA9C,UniRef:UniRef50_A0A0B8RHA5,UniRef:UniRef90_A0A7Z7W1D5;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1182287	1183258	.	+	.	ID=GCA000144955_01119_gene;locus_tag=GCA000144955_01119
contig_1	Pyrodigal	CDS	1182287	1183258	.	+	0	ID=GCA000144955_01119;Name=Lipoprotein;locus_tag=GCA000144955_01119;product=Lipoprotein;Parent=GCA000144955_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000751714.1,SO:0001217,UniParc:UPI0001DDAA9D,UniRef:UniRef100_UPI0001DDAA9D,UniRef:UniRef50_Q2G264,UniRef:UniRef90_A0A6A9H230
contig_1	Pyrodigal	gene	1183396	1183674	.	-	.	ID=GCA000144955_01120_gene;locus_tag=GCA000144955_01120;gene=tM2
contig_1	Pyrodigal	CDS	1183396	1183674	.	-	0	ID=GCA000144955_01120;Name=TM2 domain-containing protein;locus_tag=GCA000144955_01120;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000144955_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,RefSeq:WP_001548522.1,SO:0001217,UniParc:UPI00000543A8,UniRef:UniRef100_Q2G267,UniRef:UniRef50_Q2G267,UniRef:UniRef90_Q2G267
contig_1	Pyrodigal	gene	1183898	1184386	.	+	.	ID=GCA000144955_01121_gene;locus_tag=GCA000144955_01121;gene=def
contig_1	Pyrodigal	CDS	1183898	1184386	.	+	0	ID=GCA000144955_01121;Name=peptide deformylase;locus_tag=GCA000144955_01121;product=peptide deformylase;Dbxref=GO:0006412,GO:0042586,GO:0043686;gene=def;Parent=GCA000144955_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000985285.1,SO:0001217,UniParc:UPI0001DDAA9E,UniRef:UniRef100_UPI0001DDAA9E,UniRef:UniRef50_Q5HPX6,UniRef:UniRef90_Q5HGL7;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	1184379	1185314	.	+	.	ID=GCA000144955_01122_gene;locus_tag=GCA000144955_01122;gene=fmt
contig_1	Pyrodigal	CDS	1184379	1185314	.	+	0	ID=GCA000144955_01122;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000144955_01122;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000144955_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,RefSeq:WP_000161288.1,SO:0001217,UniParc:UPI0001DD9184,UniRef:UniRef100_UPI0001DD9184,UniRef:UniRef50_P94463,UniRef:UniRef90_Q2FZ68;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	1185311	1186618	.	+	.	ID=GCA000144955_01123_gene;locus_tag=GCA000144955_01123;gene=rsmB
contig_1	Pyrodigal	CDS	1185311	1186618	.	+	0	ID=GCA000144955_01123;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA000144955_01123;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0001510,GO:0003723,GO:0006355,GO:0008168;gene=rsmB;Parent=GCA000144955_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03500,RefSeq:WP_000572233.1,SO:0001217,UniParc:UPI0001DD9185,UniRef:UniRef100_A0AAX2MKU1,UniRef:UniRef50_A0A2T4MK73,UniRef:UniRef90_A0A7U7JU44;ec_number=2.1.1.176
contig_1	Pyrodigal	gene	1186621	1187715	.	+	.	ID=GCA000144955_01124_gene;locus_tag=GCA000144955_01124;gene=rlmN
contig_1	Pyrodigal	CDS	1186621	1187715	.	+	0	ID=GCA000144955_01124;Name=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;locus_tag=GCA000144955_01124;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0008757,GO:0016433,GO:0019843,GO:0030488,GO:0046677,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000144955_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,RefSeq:WP_000626897.1,SO:0001217,UniParc:UPI00000543A4,UniRef:UniRef100_Q2FZ66,UniRef:UniRef50_O34617,UniRef:UniRef90_Q2FZ66;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	1187722	1188465	.	+	.	ID=GCA000144955_01125_gene;locus_tag=GCA000144955_01125;gene=pTC1
contig_1	Pyrodigal	CDS	1187722	1188465	.	+	0	ID=GCA000144955_01125;Name=protein-serine/threonine phosphatase Stp1;locus_tag=GCA000144955_01125;product=protein-serine/threonine phosphatase Stp1;Dbxref=GO:0004722,GO:0006470;gene=pTC1;Parent=GCA000144955_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000888494,COG:COG0631,COG:T,KEGG:K20074,RefSeq:WP_000888486.1,SO:0001217,UniParc:UPI00000CAAD5,UniRef:UniRef100_A0A0D1HW69,UniRef:UniRef50_A0A0D0SSN4,UniRef:UniRef90_A0A7U7PY84;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	1188462	1190456	.	+	.	ID=GCA000144955_01126_gene;locus_tag=GCA000144955_01126;gene=pknB
contig_1	Pyrodigal	CDS	1188462	1190456	.	+	0	ID=GCA000144955_01126;Name=serine/threonine protein kinase Stk1;locus_tag=GCA000144955_01126;product=serine/threonine protein kinase Stk1;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006468,GO:0007165,GO:0009847,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042834,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0071224,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknB;Parent=GCA000144955_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000579564,COG:COG2815,COG:M,RefSeq:WP_000579545.1,SO:0001217,UniParc:UPI0001DD9186,UniRef:UniRef100_UPI0001DD9186,UniRef:UniRef50_A6QGC0,UniRef:UniRef90_A6QGC0;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1190684	1191559	.	+	.	ID=GCA000144955_01127_gene;locus_tag=GCA000144955_01127;gene=rsgA
contig_1	Pyrodigal	CDS	1190684	1191559	.	+	0	ID=GCA000144955_01127;Name=ribosome small subunit-dependent GTPase A;locus_tag=GCA000144955_01127;product=ribosome small subunit-dependent GTPase A;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0006412,GO:0019843,GO:0042274,GO:0043022,GO:0046872;gene=rsgA;Parent=GCA000144955_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,KEGG:K06949,RefSeq:WP_000847929.1,SO:0001217,UniParc:UPI00005FE448,UniRef:UniRef100_A0A8G2HZ53,UniRef:UniRef50_Q8CSV8,UniRef:UniRef90_Q9KX08;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1191560	1192204	.	+	.	ID=GCA000144955_01128_gene;locus_tag=GCA000144955_01128;gene=rpe
contig_1	Pyrodigal	CDS	1191560	1192204	.	+	0	ID=GCA000144955_01128;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA000144955_01128;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0006098;gene=rpe;Parent=GCA000144955_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0036,COG:G,KEGG:K01783,RefSeq:WP_000164332.1,SO:0001217,UniParc:UPI00000543A0,UniRef:UniRef100_Q2FZ62,UniRef:UniRef50_A0A931T8B0,UniRef:UniRef90_Q2FZ62;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	1192211	1192852	.	+	.	ID=GCA000144955_01129_gene;locus_tag=GCA000144955_01129;gene=thiN
contig_1	Pyrodigal	CDS	1192211	1192852	.	+	0	ID=GCA000144955_01129;Name=thiamine diphosphokinase;locus_tag=GCA000144955_01129;product=thiamine diphosphokinase;Dbxref=GO:0004788,GO:0006772;gene=thiN;Parent=GCA000144955_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1564,COG:H,KEGG:K00949,RefSeq:WP_000547907.1,SO:0001217,UniParc:UPI0001DD9187,UniRef:UniRef100_UPI0001DD9187,UniRef:UniRef50_A0A380G740,UniRef:UniRef90_A0A3A5LHB3;ec_number=2.7.6.2
contig_1	Pyrodigal	gene	1193233	1193421	.	-	.	ID=GCA000144955_01130_gene;locus_tag=GCA000144955_01130;gene=rpmB
contig_1	Pyrodigal	CDS	1193233	1193421	.	-	0	ID=GCA000144955_01130;Name=50S ribosomal protein L28;locus_tag=GCA000144955_01130;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000144955_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_000517908.1,SO:0001217,UniParc:UPI000005439D,UniRef:UniRef100_Q2FZ60,UniRef:UniRef50_Q82ZE4,UniRef:UniRef90_Q49X05
contig_1	Pyrodigal	gene	1193864	1194238	.	+	.	ID=GCA000144955_01131_gene;locus_tag=GCA000144955_01131;gene=yloU
contig_1	Pyrodigal	CDS	1193864	1194238	.	+	0	ID=GCA000144955_01131;Name=Alkaline shock protein 23;locus_tag=GCA000144955_01131;product=Alkaline shock protein 23;gene=yloU;Parent=GCA000144955_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000171418.1,SO:0001217,UniParc:UPI00000D7669,UniRef:UniRef100_Q2FZ59,UniRef:UniRef50_O34318,UniRef:UniRef90_A0A7U7JU57
contig_1	Pyrodigal	gene	1194253	1195899	.	+	.	ID=GCA000144955_01132_gene;locus_tag=GCA000144955_01132;gene=fakA
contig_1	Pyrodigal	CDS	1194253	1195899	.	+	0	ID=GCA000144955_01132;Name=fatty acid kinase catalytic subunit FakA;locus_tag=GCA000144955_01132;product=fatty acid kinase catalytic subunit FakA;Dbxref=GO:0004371,GO:0006071;gene=fakA;Parent=GCA000144955_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1461,COG:I,RefSeq:WP_000623912.1,SO:0001217,UniParc:UPI0001DD9188,UniRef:UniRef100_UPI0001DD9188,UniRef:UniRef50_O34751,UniRef:UniRef90_Q2FZ58
contig_1	Pyrodigal	gene	1196089	1198149	.	+	.	ID=GCA000144955_01133_gene;locus_tag=GCA000144955_01133;gene=recG
contig_1	Pyrodigal	CDS	1196089	1198149	.	+	0	ID=GCA000144955_01133;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000144955_01133;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000144955_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,KEGG:K03655,RefSeq:WP_001151489.1,SO:0001217,UniParc:UPI0001DD9189,UniRef:UniRef100_UPI0001DD9189,UniRef:UniRef50_O50581,UniRef:UniRef90_O50581;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1198367	1198924	.	+	.	ID=GCA000144955_01134_gene;locus_tag=GCA000144955_01134;gene=fapR
contig_1	Pyrodigal	CDS	1198367	1198924	.	+	0	ID=GCA000144955_01134;Name=transcription factor FapR;locus_tag=GCA000144955_01134;product=transcription factor FapR;Dbxref=GO:0003677,GO:0003700,GO:0006633,GO:0045717,GO:0045892;gene=fapR;Parent=GCA000144955_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000768423.1,SO:0001217,UniParc:UPI00000D78A4,UniRef:UniRef100_Q5HGK5,UniRef:UniRef50_Q4L5T0,UniRef:UniRef90_Q5HGK5
contig_1	Pyrodigal	gene	1198929	1199915	.	+	.	ID=GCA000144955_01135_gene;locus_tag=GCA000144955_01135;gene=plsX
contig_1	Pyrodigal	CDS	1198929	1199915	.	+	0	ID=GCA000144955_01135;Name=phosphate acyltransferase PlsX;locus_tag=GCA000144955_01135;product=phosphate acyltransferase PlsX;Dbxref=GO:0005737,GO:0006633,GO:0008610,GO:0008654,GO:0043811;gene=plsX;Parent=GCA000144955_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0416,COG:I,KEGG:K03621,RefSeq:WP_000239740.1,SO:0001217,UniParc:UPI0001DD918A,UniRef:UniRef100_UPI0001DD918A,UniRef:UniRef50_P71018,UniRef:UniRef90_Q2FZ55;ec_number=2.3.1.274
contig_1	Pyrodigal	gene	1199908	1200834	.	+	.	ID=GCA000144955_01136_gene;locus_tag=GCA000144955_01136;gene=fabD
contig_1	Pyrodigal	CDS	1199908	1200834	.	+	0	ID=GCA000144955_01136;Name=ACP S-malonyltransferase;locus_tag=GCA000144955_01136;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0005829,GO:0006633;gene=fabD;Parent=GCA000144955_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0331,COG:I,RefSeq:WP_084990187.1,SO:0001217,UniParc:UPI000A115D4E,UniRef:UniRef100_UPI000A115D4E,UniRef:UniRef50_Q99UN8,UniRef:UniRef90_Q99UN8;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	1200827	1201561	.	+	.	ID=GCA000144955_01137_gene;locus_tag=GCA000144955_01137;gene=fabG
contig_1	Pyrodigal	CDS	1200827	1201561	.	+	0	ID=GCA000144955_01137;Name=3-oxoacyl-[acyl-carrier-protein] reductase;locus_tag=GCA000144955_01137;product=3-oxoacyl-[acyl-carrier-protein] reductase;Dbxref=GO:0004316,GO:0006633,GO:0030497,GO:0050661,GO:0051287;gene=fabG;Parent=GCA000144955_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000167269.1,SO:0001217,UniParc:UPI00004B5BBF,UniRef:UniRef100_Q2FZ53,UniRef:UniRef50_Q5HGK2,UniRef:UniRef90_Q5HGK2;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1201995	1202228	.	+	.	ID=GCA000144955_01138_gene;locus_tag=GCA000144955_01138;gene=acpP
contig_1	Pyrodigal	CDS	1201995	1202228	.	+	0	ID=GCA000144955_01138;Name=acyl carrier protein;locus_tag=GCA000144955_01138;product=acyl carrier protein;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020,GO:0046677;gene=acpP;Parent=GCA000144955_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000426914.1,SO:0001217,UniParc:UPI0000125385,UniRef:UniRef100_Q2FZ51,UniRef:UniRef50_Q2FZ51,UniRef:UniRef90_Q2FZ51
contig_1	Pyrodigal	gene	1202344	1203075	.	+	.	ID=GCA000144955_01139_gene;locus_tag=GCA000144955_01139;gene=rnc
contig_1	Pyrodigal	CDS	1202344	1203075	.	+	0	ID=GCA000144955_01139;Name=ribonuclease III;locus_tag=GCA000144955_01139;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005829,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0019843,GO:0046872;gene=rnc;Parent=GCA000144955_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_000043237.1,SO:0001217,UniParc:UPI0000054AFA,UniRef:UniRef100_Q2FZ50,UniRef:UniRef50_Q2FZ50,UniRef:UniRef90_Q2FZ50;ec_number=3.1.26.3
contig_1	Pyrodigal	gene	1203222	1206788	.	+	.	ID=GCA000144955_01140_gene;locus_tag=GCA000144955_01140;gene=smc
contig_1	Pyrodigal	CDS	1203222	1206788	.	+	0	ID=GCA000144955_01140;Name=chromosome segregation protein SMC;locus_tag=GCA000144955_01140;product=chromosome segregation protein SMC;Dbxref=GO:0005524,GO:0007059,GO:0030261;gene=smc;Parent=GCA000144955_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1196,COG:D,KEGG:K03529,RefSeq:WP_000262684.1,SO:0001217,UniParc:UPI0001DD918C,UniRef:UniRef100_UPI0001DD918C,UniRef:UniRef50_A0A380G9C6,UniRef:UniRef90_A0A2I7Y681
contig_1	Pyrodigal	gene	1206788	1208038	.	+	.	ID=GCA000144955_01141_gene;locus_tag=GCA000144955_01141;gene=ftsY
contig_1	Pyrodigal	CDS	1206788	1208038	.	+	0	ID=GCA000144955_01141;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000144955_01141;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0006614,GO:0009306;gene=ftsY;Parent=GCA000144955_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0552,COG:U,KEGG:K03110,RefSeq:WP_000007686.1,SO:0001217,UniParc:UPI00005FE451,UniRef:UniRef100_A0A090LPV1,UniRef:UniRef50_Q2FZ48,UniRef:UniRef90_Q2FZ48
contig_1	Pyrodigal	gene	1208025	1208357	.	+	.	ID=GCA000144955_01142_gene;locus_tag=GCA000144955_01142;gene=ylxM
contig_1	Pyrodigal	CDS	1208025	1208357	.	+	0	ID=GCA000144955_01142;Name=putative DNA-binding protein;locus_tag=GCA000144955_01142;product=putative DNA-binding protein;gene=ylxM;Parent=GCA000144955_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2739,COG:K,RefSeq:WP_000531320.1,SO:0001217,UniParc:UPI0000054ACF,UniRef:UniRef100_Q2FZ47,UniRef:UniRef50_Q2FZ47,UniRef:UniRef90_Q2FZ47
contig_1	Pyrodigal	gene	1208383	1209750	.	+	.	ID=GCA000144955_01143_gene;locus_tag=GCA000144955_01143;gene=ffh
contig_1	Pyrodigal	CDS	1208383	1209750	.	+	0	ID=GCA000144955_01143;Name=signal recognition particle protein;locus_tag=GCA000144955_01143;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501;gene=ffh;Parent=GCA000144955_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0541,COG:U,RefSeq:WP_000863474.1,SO:0001217,UniParc:UPI00003B15E9,UniRef:UniRef100_A0A7Z7QZ67,UniRef:UniRef50_P37105,UniRef:UniRef90_A0A7Z7QZ67
contig_1	Pyrodigal	gene	1210092	1210367	.	+	.	ID=GCA000144955_01144_gene;locus_tag=GCA000144955_01144;gene=rpsP
contig_1	Pyrodigal	CDS	1210092	1210367	.	+	0	ID=GCA000144955_01144;Name=30S ribosomal protein S16;locus_tag=GCA000144955_01144;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA000144955_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_000268754.1,SO:0001217,UniParc:UPI0000134D53,UniRef:UniRef100_Q2FZ45,UniRef:UniRef50_Q2FZ45,UniRef:UniRef90_Q2FZ45
contig_1	Pyrodigal	gene	1210554	1211057	.	+	.	ID=GCA000144955_01145_gene;locus_tag=GCA000144955_01145;gene=rimM
contig_1	Pyrodigal	CDS	1210554	1211057	.	+	0	ID=GCA000144955_01145;Name=ribosome maturation factor RimM;locus_tag=GCA000144955_01145;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000144955_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_001261989.1,SO:0001217,UniParc:UPI0001DD918D,UniRef:UniRef100_UPI0001DD918D,UniRef:UniRef50_Q2FZ44,UniRef:UniRef90_Q2FZ44
contig_1	Pyrodigal	gene	1211057	1211794	.	+	.	ID=GCA000144955_01146_gene;locus_tag=GCA000144955_01146;gene=trmD
contig_1	Pyrodigal	CDS	1211057	1211794	.	+	0	ID=GCA000144955_01146;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000144955_01146;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0008033,GO:0052906;gene=trmD;Parent=GCA000144955_01146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,RefSeq:WP_000687332.1,SO:0001217,UniParc:UPI0001DD918E,UniRef:UniRef100_UPI0001DD918E,UniRef:UniRef50_Q6GHJ5,UniRef:UniRef90_Q6GHJ5;ec_number=2.1.1.228
contig_1	Infernal	regulatory_region	1211835	1211877	9e-09	+	.	ID=BPGLLONNDN_181;Name=Ribosomal protein L19 leader;product=Ribosomal protein L19 leader;Dbxref=RFAM:RF00556;inference=profile:Rfam:RF00556;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1211897	1212247	.	+	.	ID=GCA000144955_01147_gene;locus_tag=GCA000144955_01147;gene=rplS
contig_1	Pyrodigal	CDS	1211897	1212247	.	+	0	ID=GCA000144955_01147;Name=50S ribosomal protein L19;locus_tag=GCA000144955_01147;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000144955_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_000181404.1,SO:0001217,UniParc:UPI0000054AE5,UniRef:UniRef100_Q2FZ42,UniRef:UniRef50_Q8EWU9,UniRef:UniRef90_Q2FZ42
contig_1	Pyrodigal	gene	1212465	1213685	.	-	.	ID=GCA000144955_01148_gene;locus_tag=GCA000144955_01148;gene=tnp
contig_1	Pyrodigal	CDS	1212465	1213685	.	-	0	ID=GCA000144955_01148;Name=ISL3 family IS1181 transposase;locus_tag=GCA000144955_01148;product=ISL3 family IS1181 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3464,COG:X,IS:IS1181,KEGG:K07485,SO:0001217,UniRef:UniRef50_A0A380DS67,UniRef:UniRef90_A0A380DS67
contig_1	Pyrodigal	gene	1213667	1213783	.	-	.	ID=GCA000144955_01149_gene;locus_tag=GCA000144955_01149
contig_1	Pyrodigal	CDS	1213667	1213783	.	-	0	ID=GCA000144955_01149;Name=IS1181 transposase;locus_tag=GCA000144955_01149;product=IS1181 transposase;Parent=GCA000144955_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DD9190,UniRef:UniRef100_A0A380EG40,UniRef:UniRef50_A0A380EG40,UniRef:UniRef90_A0A380EG40
contig_1	Infernal	gene	1213792	1213849	.	+	.	ID=GCA000144955_01150_gene;locus_tag=GCA000144955_01150;gene=sau-5949
contig_1	Infernal	ncRNA	1213792	1213849	3.4e-12	+	.	ID=GCA000144955_01150;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000144955_01150;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000144955_01150_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1214006	1216612	.	-	.	ID=GCA000144955_01151_gene;locus_tag=GCA000144955_01151;gene=yfhO
contig_1	Pyrodigal	CDS	1214006	1216612	.	-	0	ID=GCA000144955_01151;Name=lipoteichoic acid-specific glycosyltransferase YfhO;locus_tag=GCA000144955_01151;product=lipoteichoic acid-specific glycosyltransferase YfhO;gene=yfhO;Parent=GCA000144955_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000915229,COG:COG4485,COG:S,KEGG:K25619,RefSeq:WP_000915252.1,SO:0001217,UniParc:UPI0001DD9191,UniRef:UniRef100_UPI0001DD9191,UniRef:UniRef50_Q2FZ40,UniRef:UniRef90_Q2FZ40
contig_1	Pyrodigal	gene	1217016	1217900	.	+	.	ID=GCA000144955_01152_gene;locus_tag=GCA000144955_01152;gene=ylqF
contig_1	Pyrodigal	CDS	1217016	1217900	.	+	0	ID=GCA000144955_01152;Name=ribosome biogenesis GTPase YlqF;locus_tag=GCA000144955_01152;product=ribosome biogenesis GTPase YlqF;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=ylqF;Parent=GCA000144955_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_000236727.1,SO:0001217,UniParc:UPI0001DD9192,UniRef:UniRef100_UPI0001DD9192,UniRef:UniRef50_A0A3G6UNR5,UniRef:UniRef90_A0A389V7Z2
contig_1	Pyrodigal	gene	1217884	1218651	.	+	.	ID=GCA000144955_01153_gene;locus_tag=GCA000144955_01153;gene=rnhB
contig_1	Pyrodigal	CDS	1217884	1218651	.	+	0	ID=GCA000144955_01153;Name=ribonuclease HII;locus_tag=GCA000144955_01153;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000144955_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,KEGG:K03470,RefSeq:WP_000176398.1,SO:0001217,UniParc:UPI0001DD9193,UniRef:UniRef100_A0AA40JLB7,UniRef:UniRef50_Q6GHJ1,UniRef:UniRef90_Q6GHJ1;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1218760	1219926	.	+	.	ID=GCA000144955_01154_gene;locus_tag=GCA000144955_01154;gene=sucC
contig_1	Pyrodigal	CDS	1218760	1219926	.	+	0	ID=GCA000144955_01154;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000144955_01154;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000144955_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_001020801.1,SO:0001217,UniParc:UPI0000054AE0,UniRef:UniRef100_Q2FZ37,UniRef:UniRef50_Q8UC60,UniRef:UniRef90_Q2FZ37;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1219948	1220856	.	+	.	ID=GCA000144955_01155_gene;locus_tag=GCA000144955_01155;gene=sucD
contig_1	Pyrodigal	CDS	1219948	1220856	.	+	0	ID=GCA000144955_01155;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000144955_01155;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0005829,GO:0006099,GO:0009361;gene=sucD;Parent=GCA000144955_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_000110246.1,SO:0001217,UniParc:UPI0001DD9194,UniRef:UniRef100_UPI0001DD9194,UniRef:UniRef50_P80865,UniRef:UniRef90_Q5HPU4;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1221083	1222201	.	+	.	ID=GCA000144955_01156_gene;locus_tag=GCA000144955_01156;gene=lytN
contig_1	Pyrodigal	CDS	1221083	1222201	.	+	0	ID=GCA000144955_01156;Name=putative cell wall hydrolase LytN;locus_tag=GCA000144955_01156;product=putative cell wall hydrolase LytN;Dbxref=GO:0005576,GO:0008932,GO:0016787,GO:0071555;gene=lytN;Parent=GCA000144955_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1388,COG:M,RefSeq:WP_001041654.1,SO:0001217,UniParc:UPI0001DD9195,UniRef:UniRef100_UPI0001DD9195,UniRef:UniRef50_Q9ZNI1,UniRef:UniRef90_Q9ZNI1;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1222229	1223473	.	+	.	ID=GCA000144955_01157_gene;locus_tag=GCA000144955_01157;gene=fmhC
contig_1	Pyrodigal	CDS	1222229	1223473	.	+	0	ID=GCA000144955_01157;Name=FemA/FemB family glycyltransferase FmhC;locus_tag=GCA000144955_01157;product=FemA/FemB family glycyltransferase FmhC;gene=fmhC;Parent=GCA000144955_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_100495214,COG:COG2348,COG:M,RefSeq:WP_000672855.1,SO:0001217,UniParc:UPI0001DD9196,UniRef:UniRef100_UPI0001DD9196,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_A0A380DRS9
contig_1	Pyrodigal	gene	1223645	1224517	.	+	.	ID=GCA000144955_01158_gene;locus_tag=GCA000144955_01158;gene=dprA
contig_1	Pyrodigal	CDS	1223645	1224517	.	+	0	ID=GCA000144955_01158;Name=DNA-processing protein DprA;locus_tag=GCA000144955_01158;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000144955_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_000620180.1,SO:0001217,UniParc:UPI0001DD933C,UniRef:UniRef100_UPI0001DD933C,UniRef:UniRef50_A0A140HKN1,UniRef:UniRef90_A0A140HKN1
contig_1	Pyrodigal	gene	1224691	1226766	.	+	.	ID=GCA000144955_01159_gene;locus_tag=GCA000144955_01159;gene=topA
contig_1	Pyrodigal	CDS	1224691	1226766	.	+	0	ID=GCA000144955_01159;Name=type I DNA topoisomerase;locus_tag=GCA000144955_01159;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872;gene=topA;Parent=GCA000144955_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,KEGG:K03168,RefSeq:WP_001557331.1,SO:0001217,UniParc:UPI00000D9DAC,UniRef:UniRef100_A0A4T9ZI63,UniRef:UniRef50_Q9CG80,UniRef:UniRef90_Q2FZ32;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1226922	1228229	.	+	.	ID=GCA000144955_01160_gene;locus_tag=GCA000144955_01160;gene=trmFO
contig_1	Pyrodigal	CDS	1226922	1228229	.	+	0	ID=GCA000144955_01160;Name=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;locus_tag=GCA000144955_01160;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0047151,GO:0050660;gene=trmFO;Parent=GCA000144955_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1206,COG:J,KEGG:K04094,RefSeq:WP_000195259.1,SO:0001217,UniParc:UPI0001AE85A2,UniRef:UniRef100_A0AAN1ZND9,UniRef:UniRef50_Q2FZ31,UniRef:UniRef90_Q2FZ31;ec_number=2.1.1.74
contig_1	Pyrodigal	gene	1228646	1229542	.	+	.	ID=GCA000144955_01161_gene;locus_tag=GCA000144955_01161;gene=xerC
contig_1	Pyrodigal	CDS	1228646	1229542	.	+	0	ID=GCA000144955_01161;Name=tyrosine recombinase XerC;locus_tag=GCA000144955_01161;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009037,GO:0015074,GO:0051301;gene=xerC;Parent=GCA000144955_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_001015608.1,SO:0001217,UniParc:UPI0001DD933D,UniRef:UniRef100_UPI0001DD933D,UniRef:UniRef50_Q2FZ30,UniRef:UniRef90_Q2FZ30
contig_1	Pyrodigal	gene	1229539	1230084	.	+	.	ID=GCA000144955_01162_gene;locus_tag=GCA000144955_01162;gene=hslV
contig_1	Pyrodigal	CDS	1229539	1230084	.	+	0	ID=GCA000144955_01162;Name=ATP-dependent protease subunit HslV;locus_tag=GCA000144955_01162;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA000144955_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,KEGG:K01419,RefSeq:WP_000072681.1,SO:0001217,UniParc:UPI0000054AD7,UniRef:UniRef100_Q2FZ29,UniRef:UniRef50_Q2FZ29,UniRef:UniRef90_Q2FZ29;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1230150	1231553	.	+	.	ID=GCA000144955_01163_gene;locus_tag=GCA000144955_01163;gene=hslU
contig_1	Pyrodigal	CDS	1230150	1231553	.	+	0	ID=GCA000144955_01163;Name=ATP-dependent protease ATPase subunit HslU;locus_tag=GCA000144955_01163;product=ATP-dependent protease ATPase subunit HslU;Dbxref=GO:0005524,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603;gene=hslU;Parent=GCA000144955_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_000379054.1,SO:0001217,UniParc:UPI000012CD28,UniRef:UniRef100_Q2FZ28,UniRef:UniRef50_P63796,UniRef:UniRef90_P63796;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1231578	1232351	.	+	.	ID=GCA000144955_01164_gene;locus_tag=GCA000144955_01164;gene=codY
contig_1	Pyrodigal	CDS	1231578	1232351	.	+	0	ID=GCA000144955_01164;Name=GTP-sensing pleiotropic transcriptional regulator CodY;locus_tag=GCA000144955_01164;product=GTP-sensing pleiotropic transcriptional regulator CodY;Dbxref=GO:0003677,GO:0003700,GO:0005525,GO:0005737,GO:0045892;gene=codY;Parent=GCA000144955_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4465,COG:K,KEGG:K03706,RefSeq:WP_000055340.1,SO:0001217,UniParc:UPI0001DD933E,UniRef:UniRef100_UPI0001DD933E,UniRef:UniRef50_P39779,UniRef:UniRef90_Q2FZ27
contig_1	Pyrodigal	gene	1232698	1233465	.	+	.	ID=GCA000144955_01165_gene;locus_tag=GCA000144955_01165;gene=rpsB
contig_1	Pyrodigal	CDS	1232698	1233465	.	+	0	ID=GCA000144955_01165;Name=30S ribosomal protein S2;locus_tag=GCA000144955_01165;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000144955_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_000268484.1,SO:0001217,UniParc:UPI0000134F21,UniRef:UniRef100_Q2FZ25,UniRef:UniRef50_P21464,UniRef:UniRef90_Q2FZ25
contig_1	Pyrodigal	gene	1233647	1234528	.	+	.	ID=GCA000144955_01166_gene;locus_tag=GCA000144955_01166;gene=tsf
contig_1	Pyrodigal	CDS	1233647	1234528	.	+	0	ID=GCA000144955_01166;Name=translation elongation factor Ts;locus_tag=GCA000144955_01166;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0005737,GO:0006414;gene=tsf;Parent=GCA000144955_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_000201387.1,SO:0001217,UniParc:UPI0000054ACE,UniRef:UniRef100_Q2FZ23,UniRef:UniRef50_Q2FZ23,UniRef:UniRef90_Q2FZ23
contig_1	Pyrodigal	gene	1234665	1235387	.	+	.	ID=GCA000144955_01167_gene;locus_tag=GCA000144955_01167;gene=pyrH
contig_1	Pyrodigal	CDS	1234665	1235387	.	+	0	ID=GCA000144955_01167;Name=UMP kinase;locus_tag=GCA000144955_01167;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000144955_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,RefSeq:WP_000057330.1,SO:0001217,UniParc:UPI0000132DC0,UniRef:UniRef100_Q2FZ22,UniRef:UniRef50_O31749,UniRef:UniRef90_Q2FZ22;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	1235406	1235960	.	+	.	ID=GCA000144955_01168_gene;locus_tag=GCA000144955_01168;gene=frr
contig_1	Pyrodigal	CDS	1235406	1235960	.	+	0	ID=GCA000144955_01168;Name=ribosome recycling factor;locus_tag=GCA000144955_01168;product=ribosome recycling factor;Dbxref=GO:0005737,GO:0006412,GO:0006415,GO:0008135,GO:0043023;gene=frr;Parent=GCA000144955_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_001280006.1,SO:0001217,UniParc:UPI0000054ACC,UniRef:UniRef100_Q2FZ21,UniRef:UniRef50_Q2FZ21,UniRef:UniRef90_Q2FZ21
contig_1	Pyrodigal	gene	1236333	1237103	.	+	.	ID=GCA000144955_01169_gene;locus_tag=GCA000144955_01169;gene=uppS
contig_1	Pyrodigal	CDS	1236333	1237103	.	+	0	ID=GCA000144955_01169;Name=isoprenyl transferase;locus_tag=GCA000144955_01169;product=isoprenyl transferase;Dbxref=GO:0000287,GO:0005829,GO:0008834,GO:0016094,GO:0016765,GO:0030145,GO:0045547;gene=uppS;Parent=GCA000144955_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_000473705.1,SO:0001217,UniParc:UPI00000D9DAE,UniRef:UniRef100_Q5HGH1,UniRef:UniRef50_Q8DRB3,UniRef:UniRef90_P60476;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	1237110	1237892	.	+	.	ID=GCA000144955_01170_gene;locus_tag=GCA000144955_01170;gene=cdsA
contig_1	Pyrodigal	CDS	1237110	1237892	.	+	0	ID=GCA000144955_01170;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA000144955_01170;product=Phosphatidate cytidylyltransferase;Dbxref=GO:0004605,GO:0005886,GO:0016024;gene=cdsA;Parent=GCA000144955_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,RefSeq:WP_000868413.1,SO:0001217,UniParc:UPI0000054ACA,UniRef:UniRef100_Q5HGH0,UniRef:UniRef50_Q49X46,UniRef:UniRef90_Q5HGH0;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	1238104	1239390	.	+	.	ID=GCA000144955_01171_gene;locus_tag=GCA000144955_01171;gene=rseP
contig_1	Pyrodigal	CDS	1238104	1239390	.	+	0	ID=GCA000144955_01171;Name=RIP metalloprotease RseP;locus_tag=GCA000144955_01171;product=RIP metalloprotease RseP;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0016020,GO:0046872;gene=rseP;Parent=GCA000144955_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_000121122.1,SO:0001217,UniParc:UPI00000D9DAF,UniRef:UniRef100_Q8NWZ4,UniRef:UniRef50_P63333,UniRef:UniRef90_P63333;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1239410	1241113	.	+	.	ID=GCA000144955_01172_gene;locus_tag=GCA000144955_01172;gene=proS
contig_1	Pyrodigal	CDS	1239410	1241113	.	+	0	ID=GCA000144955_01172;Name=proline--tRNA ligase;locus_tag=GCA000144955_01172;product=proline--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524,GO:0005829,GO:0006418,GO:0006433,GO:0016740;gene=proS;Parent=GCA000144955_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_000814101.1,SO:0001217,UniParc:UPI0001DD933F,UniRef:UniRef100_UPI0001DD933F,UniRef:UniRef50_Q2G1Z4,UniRef:UniRef90_Q2G1Z4;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	1241371	1245687	.	+	.	ID=GCA000144955_01173_gene;locus_tag=GCA000144955_01173;gene=polC
contig_1	Pyrodigal	CDS	1241371	1245687	.	+	0	ID=GCA000144955_01173;Name=PolC-type DNA polymerase III;locus_tag=GCA000144955_01173;product=PolC-type DNA polymerase III;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006261,GO:0008408;gene=polC;Parent=GCA000144955_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03763,SO:0001217,UniRef:UniRef50_Q2G1Z8,UniRef:UniRef90_P0C1P9;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1245977	1246444	.	+	.	ID=GCA000144955_01174_gene;locus_tag=GCA000144955_01174;gene=rimP
contig_1	Pyrodigal	CDS	1245977	1246444	.	+	0	ID=GCA000144955_01174;Name=ribosome maturation factor RimP;locus_tag=GCA000144955_01174;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000144955_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_000036631.1,SO:0001217,UniParc:UPI00000D9DB0,UniRef:UniRef100_Q2G2D3,UniRef:UniRef50_P32726,UniRef:UniRef90_Q2G2D3
contig_1	Pyrodigal	gene	1246465	1247640	.	+	.	ID=GCA000144955_01175_gene;locus_tag=GCA000144955_01175;gene=nusA
contig_1	Pyrodigal	CDS	1246465	1247640	.	+	0	ID=GCA000144955_01175;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA000144955_01175;product=Transcription termination/antitermination protein NusA;gene=nusA;Parent=GCA000144955_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000097463.1,SO:0001217,UniParc:UPI00003B15FA,UniRef:UniRef100_A0A0U1MJR3,UniRef:UniRef50_K9AT72,UniRef:UniRef90_A0A0U1MJR3
contig_1	Pyrodigal	gene	1247661	1247945	.	+	.	ID=GCA000144955_01176_gene;locus_tag=GCA000144955_01176;gene=rnpM
contig_1	Pyrodigal	CDS	1247661	1247945	.	+	0	ID=GCA000144955_01176;Name=RNase P modulator RnpM;locus_tag=GCA000144955_01176;product=RNase P modulator RnpM;gene=rnpM;Parent=GCA000144955_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:AJ,COG:COG2740,KEGG:K07742,RefSeq:WP_000727423.1,SO:0001217,UniParc:UPI0000054AC3,UniRef:UniRef100_Q2G2D1,UniRef:UniRef50_A0A920C274,UniRef:UniRef90_Q2G2D1
contig_1	Pyrodigal	gene	1247942	1248259	.	+	.	ID=GCA000144955_01177_gene;locus_tag=GCA000144955_01177;gene=rpl7Ae
contig_1	Pyrodigal	CDS	1247942	1248259	.	+	0	ID=GCA000144955_01177;Name=YlxQ family RNA-binding protein;locus_tag=GCA000144955_01177;product=YlxQ family RNA-binding protein;Dbxref=GO:0003723,GO:0003735;gene=rpl7Ae;Parent=GCA000144955_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1358,COG:J,RefSeq:WP_000020853.1,SO:0001217,UniParc:UPI0000054AC2,UniRef:UniRef100_Q2G2C9,UniRef:UniRef50_Q2G2C9,UniRef:UniRef90_Q2G2C9
contig_1	Pyrodigal	gene	1248264	1250372	.	+	.	ID=GCA000144955_01178_gene;locus_tag=GCA000144955_01178;gene=infB
contig_1	Pyrodigal	CDS	1248264	1250372	.	+	0	ID=GCA000144955_01178;Name=translation initiation factor IF-2;locus_tag=GCA000144955_01178;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413;gene=infB;Parent=GCA000144955_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0532,COG:J,RefSeq:WP_000043646.1,SO:0001217,UniParc:UPI0001DD9341,UniRef:UniRef100_UPI0001DD9341,UniRef:UniRef50_P17889,UniRef:UniRef90_Q2G2D0
contig_1	Pyrodigal	gene	1250758	1251108	.	+	.	ID=GCA000144955_01179_gene;locus_tag=GCA000144955_01179;gene=rbfA
contig_1	Pyrodigal	CDS	1250758	1251108	.	+	0	ID=GCA000144955_01179;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000144955_01179;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0043024;gene=rbfA;Parent=GCA000144955_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0858,COG:J,RefSeq:WP_000097322.1,SO:0001217,UniParc:UPI00001331BF,UniRef:UniRef100_Q2G2Q4,UniRef:UniRef50_Q2G2Q4,UniRef:UniRef90_Q2G2Q4
contig_1	Pyrodigal	gene	1251278	1252195	.	+	.	ID=GCA000144955_01180_gene;locus_tag=GCA000144955_01180;gene=truB
contig_1	Pyrodigal	CDS	1251278	1252195	.	+	0	ID=GCA000144955_01180;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000144955_01180;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000144955_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,KEGG:K03177,RefSeq:WP_000282295.1,SO:0001217,UniParc:UPI0001DD9342,UniRef:UniRef100_A0A6A9GXZ6,UniRef:UniRef50_Q2G2Q3,UniRef:UniRef90_Q2G2Q3;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	1252210	1253181	.	+	.	ID=GCA000144955_01181_gene;locus_tag=GCA000144955_01181;gene=ribF
contig_1	Pyrodigal	CDS	1252210	1253181	.	+	0	ID=GCA000144955_01181;Name=riboflavin biosynthesis protein RibF;locus_tag=GCA000144955_01181;product=riboflavin biosynthesis protein RibF;Dbxref=GO:0003919,GO:0005737,GO:0006747,GO:0009398;gene=ribF;Parent=GCA000144955_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_000864185.1,SO:0001217,UniParc:UPI0000054ABD,UniRef:UniRef100_Q2G2Q2,UniRef:UniRef50_Q2G2Q2,UniRef:UniRef90_Q2G2Q2;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	1253296	1253565	.	+	.	ID=GCA000144955_01182_gene;locus_tag=GCA000144955_01182;gene=rpsO
contig_1	Pyrodigal	CDS	1253296	1253565	.	+	0	ID=GCA000144955_01182;Name=30S ribosomal protein S15;locus_tag=GCA000144955_01182;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000144955_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_001018328.1,SO:0001217,UniParc:UPI000004801C,UniRef:UniRef100_Q2G2Q1,UniRef:UniRef50_Q2G2Q1,UniRef:UniRef90_Q2G2Q1
contig_1	Pyrodigal	gene	1253935	1256031	.	+	.	ID=GCA000144955_01183_gene;locus_tag=GCA000144955_01183;gene=pnp
contig_1	Pyrodigal	CDS	1253935	1256031	.	+	0	ID=GCA000144955_01183;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000144955_01183;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA000144955_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_000076689.1,SO:0001217,UniParc:UPI0001DD9343,UniRef:UniRef100_UPI0001DD9343,UniRef:UniRef50_Q2FZ20,UniRef:UniRef90_Q2FZ20;ec_number=2.7.7.8
contig_1	Pyrodigal	gene	1256267	1257940	.	+	.	ID=GCA000144955_01184_gene;locus_tag=GCA000144955_01184;gene=rnj2
contig_1	Pyrodigal	CDS	1256267	1257940	.	+	0	ID=GCA000144955_01184;Name=Ribonuclease J 2;locus_tag=GCA000144955_01184;product=Ribonuclease J 2;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnj2;Parent=GCA000144955_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000052590.1,SO:0001217,UniParc:UPI00000D7781,UniRef:UniRef100_Q2FZ19,UniRef:UniRef50_Q2FZ19,UniRef:UniRef90_Q2FZ19;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1258197	1260566	.	+	.	ID=GCA000144955_01185_gene;locus_tag=GCA000144955_01185;gene=ftsK
contig_1	Pyrodigal	CDS	1258197	1260566	.	+	0	ID=GCA000144955_01185;Name=DNA translocase FtsK;locus_tag=GCA000144955_01185;product=DNA translocase FtsK;gene=ftsK;Parent=GCA000144955_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000035764.1,SO:0001217,UniParc:UPI0001DD9344,UniRef:UniRef100_UPI0001DD9344,UniRef:UniRef50_Q5HGF5,UniRef:UniRef90_UPI0001DD9344
contig_1	Pyrodigal	gene	1260571	1261284	.	+	.	ID=GCA000144955_01186_gene;locus_tag=GCA000144955_01186;gene=mngR
contig_1	Pyrodigal	CDS	1260571	1261284	.	+	0	ID=GCA000144955_01186;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000144955_01186;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000144955_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_001293306.1,SO:0001217,UniParc:UPI00003B1ACB,UniRef:UniRef100_A0A181F648,UniRef:UniRef50_Q2FZ17,UniRef:UniRef90_Q2FZ17
contig_1	Pyrodigal	gene	1261315	1262580	.	+	.	ID=GCA000144955_01187_gene;locus_tag=GCA000144955_01187;gene=yfmF
contig_1	Pyrodigal	CDS	1261315	1262580	.	+	0	ID=GCA000144955_01187;Name=EF-P 5-aminopentanol modification-associated protein YfmF;locus_tag=GCA000144955_01187;product=EF-P 5-aminopentanol modification-associated protein YfmF;gene=yfmF;Parent=GCA000144955_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000089945.1,SO:0001217,UniParc:UPI0001DD9345,UniRef:UniRef100_UPI0001DD9345,UniRef:UniRef50_Q2FZ16,UniRef:UniRef90_Q2FZ16
contig_1	Pyrodigal	gene	1262580	1263866	.	+	.	ID=GCA000144955_01188_gene;locus_tag=GCA000144955_01188;gene=yfmH
contig_1	Pyrodigal	CDS	1262580	1263866	.	+	0	ID=GCA000144955_01188;Name=EF-P 5-aminopentanol modification-associated protein YfmH;locus_tag=GCA000144955_01188;product=EF-P 5-aminopentanol modification-associated protein YfmH;gene=yfmH;Parent=GCA000144955_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000664769.1,SO:0001217,UniParc:UPI0001DA247D,UniRef:UniRef100_UPI0001DA247D,UniRef:UniRef50_A0A7U7PY37,UniRef:UniRef90_A0A7U7PY37
contig_1	Pyrodigal	gene	1263866	1264570	.	+	.	ID=GCA000144955_01189_gene;locus_tag=GCA000144955_01189;gene=ymfI
contig_1	Pyrodigal	CDS	1263866	1264570	.	+	0	ID=GCA000144955_01189;Name=elongation factor P 5-aminopentanone reductase;locus_tag=GCA000144955_01189;product=elongation factor P 5-aminopentanone reductase;gene=ymfI;Parent=GCA000144955_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000646230.1,SO:0001217,UniParc:UPI0001DD94F5,UniRef:UniRef100_UPI0001DD94F5,UniRef:UniRef50_A0A380G8X7,UniRef:UniRef90_A0A389U4Z7
contig_1	Pyrodigal	gene	1264675	1265502	.	+	.	ID=GCA000144955_01190_gene;locus_tag=GCA000144955_01190
contig_1	Pyrodigal	CDS	1264675	1265502	.	+	0	ID=GCA000144955_01190;Name=ACT domain-containing protein;locus_tag=GCA000144955_01190;product=ACT domain-containing protein;Parent=GCA000144955_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214890.1,SO:0001217,UniParc:UPI00000D77F9,UniRef:UniRef100_Q2FZ13,UniRef:UniRef50_O31769,UniRef:UniRef90_A0A1J3ZWG3
contig_1	Pyrodigal	gene	1265521	1265913	.	+	.	ID=GCA000144955_01191_gene;locus_tag=GCA000144955_01191;gene=rodZ
contig_1	Pyrodigal	CDS	1265521	1265913	.	+	0	ID=GCA000144955_01191;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_01191;product=HTH cro/C1-type domain-containing protein;gene=rodZ;Parent=GCA000144955_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1426,COG:D,RefSeq:WP_000859443.1,SO:0001217,UniParc:UPI00000D78AE,UniRef:UniRef100_Q2FZ12,UniRef:UniRef50_Q2FZ12,UniRef:UniRef90_Q2FZ12
contig_1	Pyrodigal	gene	1265947	1266525	.	+	.	ID=GCA000144955_01192_gene;locus_tag=GCA000144955_01192;gene=pgsA
contig_1	Pyrodigal	CDS	1265947	1266525	.	+	0	ID=GCA000144955_01192;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;locus_tag=GCA000144955_01192;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;Dbxref=GO:0005886,GO:0006655,GO:0008444,GO:0008654,GO:0016020;gene=pgsA;Parent=GCA000144955_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,KEGG:K00995,RefSeq:WP_001025093.1,SO:0001217,UniParc:UPI0000054AB2,UniRef:UniRef100_Q5HGE8,UniRef:UniRef50_Q5HGE8,UniRef:UniRef90_Q5HGE8;ec_number=2.7.8.5
contig_1	Pyrodigal	gene	1266898	1268049	.	+	.	ID=GCA000144955_01193_gene;locus_tag=GCA000144955_01193;gene=cinA
contig_1	Pyrodigal	CDS	1266898	1268049	.	+	0	ID=GCA000144955_01193;Name=Putative competence-damage inducible protein;locus_tag=GCA000144955_01193;product=Putative competence-damage inducible protein;gene=cinA;Parent=GCA000144955_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1058,COG:L,RefSeq:WP_000020359.1,SO:0001217,UniParc:UPI0001DD94F6,UniRef:UniRef100_UPI0001DD94F6,UniRef:UniRef50_A0A380G809,UniRef:UniRef90_A0A389XUJ1
contig_1	Pyrodigal	gene	1268214	1269257	.	+	.	ID=GCA000144955_01194_gene;locus_tag=GCA000144955_01194;gene=recA
contig_1	Pyrodigal	CDS	1268214	1269257	.	+	0	ID=GCA000144955_01194;Name=recombinase RecA;locus_tag=GCA000144955_01194;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA000144955_01194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_000368164.1,SO:0001217,UniParc:UPI0001DD94F7,UniRef:UniRef100_UPI0001DD94F7,UniRef:UniRef50_P0A452,UniRef:UniRef90_Q5HPQ6
contig_1	Pyrodigal	gene	1269611	1271170	.	+	.	ID=GCA000144955_01195_gene;locus_tag=GCA000144955_01195;gene=rny
contig_1	Pyrodigal	CDS	1269611	1271170	.	+	0	ID=GCA000144955_01195;Name=ribonuclease Y;locus_tag=GCA000144955_01195;product=ribonuclease Y;Dbxref=GO:0003723,GO:0004521,GO:0005886,GO:0006402,GO:0016020;gene=rny;Parent=GCA000144955_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,RefSeq:WP_001050913.1,SO:0001217,UniParc:UPI00000D765A,UniRef:UniRef100_Q2FZ08,UniRef:UniRef50_O31774,UniRef:UniRef90_Q2FZ08;ec_number=3.1.-.-
contig_1	Infernal	gene	1271183	1271274	.	+	.	ID=GCA000144955_01196_gene;locus_tag=GCA000144955_01196;gene=sau-27
contig_1	Infernal	ncRNA	1271183	1271274	1.3e-18	+	.	ID=GCA000144955_01196;Name=Staphylococcus sRNA sau-27;locus_tag=GCA000144955_01196;product=Staphylococcus sRNA sau-27;Dbxref=RFAM:RF02387;Parent=GCA000144955_01196_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02387
contig_1	Pyrodigal	gene	1271468	1271683	.	-	.	ID=GCA000144955_01197_gene;locus_tag=GCA000144955_01197
contig_1	Pyrodigal	CDS	1271468	1271683	.	-	0	ID=GCA000144955_01197;Name=Phage protein;locus_tag=GCA000144955_01197;product=Phage protein;Parent=GCA000144955_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000026308.1,SO:0001217,UniParc:UPI0000054AAD,UniRef:UniRef100_Q2FZ07,UniRef:UniRef50_Q2FZ07,UniRef:UniRef90_Q2FZ07
contig_1	Pyrodigal	gene	1271857	1272654	.	+	.	ID=GCA000144955_01198_gene;locus_tag=GCA000144955_01198;gene=ymdB
contig_1	Pyrodigal	CDS	1271857	1272654	.	+	0	ID=GCA000144955_01198;Name=TIGR00282 family metallophosphoesterase;locus_tag=GCA000144955_01198;product=TIGR00282 family metallophosphoesterase;gene=ymdB;Parent=GCA000144955_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1692,COG:T,RefSeq:WP_001222105.1,SO:0001217,UniParc:UPI0000054AAC,UniRef:UniRef100_Q2FZ06,UniRef:UniRef50_O31775,UniRef:UniRef90_Q2FZ06
contig_1	Pyrodigal	gene	1272794	1274554	.	+	.	ID=GCA000144955_01199_gene;locus_tag=GCA000144955_01199;gene=porG
contig_1	Pyrodigal	CDS	1272794	1274554	.	+	0	ID=GCA000144955_01199;Name=2-oxoacid ferredoxin oxidoreductase subunit alpha;locus_tag=GCA000144955_01199;product=2-oxoacid ferredoxin oxidoreductase subunit alpha;gene=porG;Parent=GCA000144955_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1014,KEGG:K00174,RefSeq:WP_000804323.1,SO:0001217,UniParc:UPI0001DD94F8,UniRef:UniRef100_UPI0001DD94F8,UniRef:UniRef50_A0A840PSQ9,UniRef:UniRef90_A0A380DYA8;ec_number=1.2.7.3
contig_1	Pyrodigal	gene	1274555	1275421	.	+	.	ID=GCA000144955_01200_gene;locus_tag=GCA000144955_01200;gene=porB
contig_1	Pyrodigal	CDS	1274555	1275421	.	+	0	ID=GCA000144955_01200;Name=2-oxoacid ferredoxin oxidoreductase;locus_tag=GCA000144955_01200;product=2-oxoacid ferredoxin oxidoreductase;gene=porB;Parent=GCA000144955_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1013,RefSeq:WP_000190138.1,SO:0001217,UniParc:UPI00000D76D1,UniRef:UniRef100_W8UY88,UniRef:UniRef50_A0A239ZH51,UniRef:UniRef90_W8UY88
contig_1	Pyrodigal	gene	1275516	1275809	.	+	.	ID=GCA000144955_01201_gene;locus_tag=GCA000144955_01201;gene=yqgV
contig_1	Pyrodigal	CDS	1275516	1275809	.	+	0	ID=GCA000144955_01201;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000144955_01201;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000144955_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_000655666.1,SO:0001217,UniParc:UPI0000054AA9,UniRef:UniRef100_Q2FZ03,UniRef:UniRef50_Q49X83,UniRef:UniRef90_A0A7U7JUD0
contig_1	Pyrodigal	gene	1275943	1277487	.	+	.	ID=GCA000144955_01202_gene;locus_tag=GCA000144955_01202;gene=miaB
contig_1	Pyrodigal	CDS	1275943	1277487	.	+	0	ID=GCA000144955_01202;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000144955_01202;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0035600,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000144955_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_001001521.1,SO:0001217,UniParc:UPI00003B160A,UniRef:UniRef100_Q6GHE3,UniRef:UniRef50_O31778,UniRef:UniRef90_Q2FZ02;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	1277488	1277853	.	+	.	ID=GCA000144955_01203_gene;locus_tag=GCA000144955_01203;gene=ymcA
contig_1	Pyrodigal	CDS	1277488	1277853	.	+	0	ID=GCA000144955_01203;Name=YlbF family regulator;locus_tag=GCA000144955_01203;product=YlbF family regulator;gene=ymcA;Parent=GCA000144955_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4550,COG:T,RefSeq:WP_000282386.1,SO:0001217,UniParc:UPI00000D767C,UniRef:UniRef100_A0A7Z7QZ25,UniRef:UniRef50_Q49X86,UniRef:UniRef90_Q2FZ01
contig_1	Pyrodigal	gene	1277880	1278371	.	+	.	ID=GCA000144955_01204_gene;locus_tag=GCA000144955_01204;gene=thiW
contig_1	Pyrodigal	CDS	1277880	1278371	.	+	0	ID=GCA000144955_01204;Name=energy coupling factor transporter S component ThiW;locus_tag=GCA000144955_01204;product=energy coupling factor transporter S component ThiW;Dbxref=GO:0005215,GO:0006810,GO:0009228;gene=thiW;Parent=GCA000144955_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4732,COG:H,RefSeq:WP_000842279.1,SO:0001217,UniParc:UPI0001DD94F9,UniRef:UniRef100_UPI0001DD94F9,UniRef:UniRef50_Q2FZ00,UniRef:UniRef90_Q2FZ00
contig_1	Pyrodigal	gene	1278674	1281292	.	+	.	ID=GCA000144955_01205_gene;locus_tag=GCA000144955_01205;gene=mutS
contig_1	Pyrodigal	CDS	1278674	1281292	.	+	0	ID=GCA000144955_01205;Name=DNA mismatch repair protein MutS;locus_tag=GCA000144955_01205;product=DNA mismatch repair protein MutS;Dbxref=GO:0003684,GO:0005524,GO:0005829,GO:0006298,GO:0030983,GO:0140664;gene=mutS;Parent=GCA000144955_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000073342.1,SO:0001217,UniParc:UPI0001DD94FA,UniRef:UniRef100_UPI0001DD94FA,UniRef:UniRef50_Q2FYZ9,UniRef:UniRef90_Q2FYZ9
contig_1	Pyrodigal	gene	1281305	1283314	.	+	.	ID=GCA000144955_01206_gene;locus_tag=GCA000144955_01206;gene=mutL
contig_1	Pyrodigal	CDS	1281305	1283314	.	+	0	ID=GCA000144955_01206;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA000144955_01206;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300,GO:0140664;gene=mutL;Parent=GCA000144955_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_000516258.1,SO:0001217,UniParc:UPI0001DD94FB,UniRef:UniRef100_UPI0001DD94FB,UniRef:UniRef50_Q93T05,UniRef:UniRef90_Q93T05
contig_1	Pyrodigal	gene	1283329	1283862	.	+	.	ID=GCA000144955_01207_gene;locus_tag=GCA000144955_01207;gene=glpP
contig_1	Pyrodigal	CDS	1283329	1283862	.	+	0	ID=GCA000144955_01207;Name=Glycerol uptake operon antiterminator regulatory protein;locus_tag=GCA000144955_01207;product=Glycerol uptake operon antiterminator regulatory protein;gene=glpP;Parent=GCA000144955_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1954,COG:K,KEGG:K02443,RefSeq:WP_001063535.1,SO:0001217,UniParc:UPI00000D7824,UniRef:UniRef100_A0A7Z7W1G4,UniRef:UniRef50_Q2FYZ7,UniRef:UniRef90_Q2FYZ7
contig_1	Pyrodigal	gene	1284336	1285154	.	+	.	ID=GCA000144955_01208_gene;locus_tag=GCA000144955_01208;gene=glpF
contig_1	Pyrodigal	CDS	1284336	1285154	.	+	0	ID=GCA000144955_01208;Name=Aquaporin family protein;locus_tag=GCA000144955_01208;product=Aquaporin family protein;gene=glpF;Parent=GCA000144955_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0580,COG:G,RefSeq:WP_001103747.1,SO:0001217,UniParc:UPI00003B160F,UniRef:UniRef100_A0A0D1HHN6,UniRef:UniRef50_P18156,UniRef:UniRef90_Q2FYZ6
contig_1	Pyrodigal	gene	1285284	1286780	.	+	.	ID=GCA000144955_01209_gene;locus_tag=GCA000144955_01209;gene=glpK
contig_1	Pyrodigal	CDS	1285284	1286780	.	+	0	ID=GCA000144955_01209;Name=glycerol kinase GlpK;locus_tag=GCA000144955_01209;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563;gene=glpK;Parent=GCA000144955_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,RefSeq:WP_000417380.1,SO:0001217,UniParc:UPI0001DD94FC,UniRef:UniRef100_UPI0001DD94FC,UniRef:UniRef50_O34153,UniRef:UniRef90_Q2FYZ5;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	1286938	1288611	.	+	.	ID=GCA000144955_01210_gene;locus_tag=GCA000144955_01210;gene=glpD
contig_1	Pyrodigal	CDS	1286938	1288611	.	+	0	ID=GCA000144955_01210;Name=Aerobic glycerol-3-phosphate dehydrogenase;locus_tag=GCA000144955_01210;product=Aerobic glycerol-3-phosphate dehydrogenase;Dbxref=GO:0004368,GO:0005737,GO:0019563,GO:0046168;gene=glpD;Parent=GCA000144955_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_001218598.1,SO:0001217,UniParc:UPI0000EADFB8,UniRef:UniRef100_Q2YXR5,UniRef:UniRef50_Q6GHD4,UniRef:UniRef90_Q6GHD4;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	1288758	1289675	.	+	.	ID=GCA000144955_01211_gene;locus_tag=GCA000144955_01211;gene=pldB
contig_1	Pyrodigal	CDS	1288758	1289675	.	+	0	ID=GCA000144955_01211;Name=Hydrolase%2C alpha/beta fold family domain protein;locus_tag=GCA000144955_01211;product=Hydrolase%2C alpha/beta fold family domain protein;gene=pldB;Parent=GCA000144955_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,SO:0001217,UniRef:UniRef50_Q2FYZ3,UniRef:UniRef90_Q2FYZ3
contig_1	Pyrodigal	gene	1289693	1290628	.	+	.	ID=GCA000144955_01212_gene;locus_tag=GCA000144955_01212;gene=miaA
contig_1	Pyrodigal	CDS	1289693	1290628	.	+	0	ID=GCA000144955_01212;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000144955_01212;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000144955_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_014532754.1,SO:0001217,UniParc:UPI0001DD94FE,UniRef:UniRef100_UPI0001DD94FE,UniRef:UniRef50_Q5HPN8,UniRef:UniRef90_Q2YXR3;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	1290643	1290876	.	+	.	ID=GCA000144955_01213_gene;locus_tag=GCA000144955_01213;gene=hfq
contig_1	Pyrodigal	CDS	1290643	1290876	.	+	0	ID=GCA000144955_01213;Name=RNA chaperone Hfq;locus_tag=GCA000144955_01213;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0016070;gene=hfq;Parent=GCA000144955_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000561361.1,SO:0001217,UniParc:UPI0001DD94FF,UniRef:UniRef100_UPI0001DD94FF,UniRef:UniRef50_A0A640MVL3,UniRef:UniRef90_A0A0D1I1E7
contig_1	Pyrodigal	gene	1291098	1291574	.	-	.	ID=GCA000144955_01214_gene;locus_tag=GCA000144955_01214;gene=bsaA
contig_1	Pyrodigal	CDS	1291098	1291574	.	-	0	ID=GCA000144955_01214;Name=Glutathione peroxidase-like protein BsaA;locus_tag=GCA000144955_01214;product=Glutathione peroxidase-like protein BsaA;Dbxref=GO:0004601,GO:0034599;gene=bsaA;Parent=GCA000144955_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_000448078.1,SO:0001217,UniParc:UPI0000054618,UniRef:UniRef100_Q5HGC7,UniRef:UniRef50_Q8CSR9,UniRef:UniRef90_Q5HGC7;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	1291686	1292924	.	+	.	ID=GCA000144955_01215_gene;locus_tag=GCA000144955_01215;gene=hflX
contig_1	Pyrodigal	CDS	1291686	1292924	.	+	0	ID=GCA000144955_01215;Name=GTPase HflX;locus_tag=GCA000144955_01215;product=GTPase HflX;Dbxref=GO:0005525;gene=hflX;Parent=GCA000144955_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2262,COG:J,RefSeq:WP_000068610.1,SO:0001217,UniParc:UPI0001DD9500,UniRef:UniRef100_UPI0001DD9500,UniRef:UniRef50_B9DPA4,UniRef:UniRef90_Q2FYY9
contig_1	Pyrodigal	gene	1292943	1294181	.	+	.	ID=GCA000144955_01216_gene;locus_tag=GCA000144955_01216;gene=ynbB
contig_1	Pyrodigal	CDS	1292943	1294181	.	+	0	ID=GCA000144955_01216;Name=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;locus_tag=GCA000144955_01216;product=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;gene=ynbB;Parent=GCA000144955_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4100,COG:PR,RefSeq:WP_000652042.1,SO:0001217,UniParc:UPI0001DD9501,UniRef:UniRef100_UPI0001DD9501,UniRef:UniRef50_A0A202F6W0,UniRef:UniRef90_Q2FYY8
contig_1	Pyrodigal	gene	1294425	1294793	.	+	.	ID=GCA000144955_01217_gene;locus_tag=GCA000144955_01217;gene=soxR
contig_1	Pyrodigal	CDS	1294425	1294793	.	+	0	ID=GCA000144955_01217;Name=HTH merR-type domain-containing protein;locus_tag=GCA000144955_01217;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000144955_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000624945.1,SO:0001217,UniParc:UPI0000054602,UniRef:UniRef100_Q2FYY7,UniRef:UniRef50_Q2FYY7,UniRef:UniRef90_Q2FYY7
contig_1	Pyrodigal	gene	1294812	1296152	.	+	.	ID=GCA000144955_01218_gene;locus_tag=GCA000144955_01218;gene=glnA
contig_1	Pyrodigal	CDS	1294812	1296152	.	+	0	ID=GCA000144955_01218;Name=type I glutamate--ammonia ligase;locus_tag=GCA000144955_01218;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0006542,GO:0046872;gene=glnA;Parent=GCA000144955_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_001126603.1,SO:0001217,UniParc:UPI000012B701,UniRef:UniRef100_Q5HGC3,UniRef:UniRef50_P12425,UniRef:UniRef90_Q5HGC3;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	1297470	1297682	.	+	.	ID=GCA000144955_01219_gene;locus_tag=GCA000144955_01219
contig_1	Pyrodigal	CDS	1297470	1297682	.	+	0	ID=GCA000144955_01219;Name=helix-turn-helix domain-containing protein;locus_tag=GCA000144955_01219;product=helix-turn-helix domain-containing protein;Parent=GCA000144955_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A3E0IKC6,UniRef:UniRef90_UPI000B9A2E7F
contig_1	Pyrodigal	gene	1297977	1298183	.	+	.	ID=GCA000144955_01220_gene;locus_tag=GCA000144955_01220
contig_1	Pyrodigal	CDS	1297977	1298183	.	+	0	ID=GCA000144955_01220;Name=DNA-binding protein;locus_tag=GCA000144955_01220;product=DNA-binding protein;Parent=GCA000144955_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001002338.1,SO:0001217,UniParc:UPI0001DD9503,UniRef:UniRef100_UPI0001DD9503,UniRef:UniRef50_Q2FYY3,UniRef:UniRef90_Q2FYY3
contig_1	Pyrodigal	gene	1299421	1299606	.	+	.	ID=GCA000144955_01221_gene;locus_tag=GCA000144955_01221
contig_1	Pyrodigal	CDS	1299421	1299606	.	+	0	ID=GCA000144955_01221;Name=DNA-binding protein;locus_tag=GCA000144955_01221;product=DNA-binding protein;Parent=GCA000144955_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000006110.1,SO:0001217,UniParc:UPI00000CAA56,UniRef:UniRef100_Q2FYY1,UniRef:UniRef50_Q2FYY1,UniRef:UniRef90_Q2FYY1
contig_1	Pyrodigal	gene	1300118	1300534	.	+	.	ID=GCA000144955_01222_gene;locus_tag=GCA000144955_01222
contig_1	Pyrodigal	CDS	1300118	1300534	.	+	0	ID=GCA000144955_01222;Name=Phage protein;locus_tag=GCA000144955_01222;product=Phage protein;Parent=GCA000144955_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477481.1,SO:0001217,UniParc:UPI0001DD9504,UniRef:UniRef100_UPI0001DD9504,UniRef:UniRef50_A0A6B5BDK7,UniRef:UniRef90_A0A7U7PZ11
contig_1	Pyrodigal	gene	1300943	1301149	.	-	.	ID=GCA000144955_01223_gene;locus_tag=GCA000144955_01223;gene=istB
contig_1	Pyrodigal	CDS	1300943	1301149	.	-	0	ID=GCA000144955_01223;Name=IstB helper protein;locus_tag=GCA000144955_01223;product=IstB helper protein;gene=istB;Parent=GCA000144955_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_237703658.1,SO:0001217,UniParc:UPI001ED90DD2,UniRef:UniRef100_UPI001ED90DD2,UniRef:UniRef50_A0A8G2M8L5,UniRef:UniRef90_A0A8G2M8L5
contig_1	Pyrodigal	gene	1301149	1301652	.	-	.	ID=GCA000144955_01224_gene;locus_tag=GCA000144955_01224
contig_1	Pyrodigal	CDS	1301149	1301652	.	-	0	ID=GCA000144955_01224;Name=transposase;locus_tag=GCA000144955_01224;product=transposase;Parent=GCA000144955_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532755.1,SO:0001217,UniParc:UPI0001DD9506,UniRef:UniRef100_UPI0001DD9506,UniRef:UniRef50_UPI00202DB7F2,UniRef:UniRef90_UPI0001DD9506
contig_1	Pyrodigal	gene	1301766	1302014	.	+	.	ID=GCA000144955_01225_gene;locus_tag=GCA000144955_01225
contig_1	Pyrodigal	CDS	1301766	1302014	.	+	0	ID=GCA000144955_01225;Name=hypothetical protein;locus_tag=GCA000144955_01225;product=hypothetical protein;Parent=GCA000144955_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001089528.1,SO:0001217,UniParc:UPI0001DD9507,UniRef:UniRef100_UPI0001DD9507,UniRef:UniRef50_A0A2S6DAZ6,UniRef:UniRef90_UPI001249005F
contig_1	Pyrodigal	gene	1302259	1302501	.	+	.	ID=GCA000144955_01226_gene;locus_tag=GCA000144955_01226
contig_1	Pyrodigal	CDS	1302259	1302501	.	+	0	ID=GCA000144955_01226;Name=polymorphic toxin type 50 domain-containing protein;locus_tag=GCA000144955_01226;product=polymorphic toxin type 50 domain-containing protein;Parent=GCA000144955_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532756.1,SO:0001217,UniParc:UPI0001DD9508,UniRef:UniRef100_UPI0001DD9508,UniRef:UniRef50_UPI0001DD9508,UniRef:UniRef90_UPI0001DD9508
contig_1	Pyrodigal	gene	1302501	1302698	.	+	.	ID=GCA000144955_01227_gene;locus_tag=GCA000144955_01227
contig_1	Pyrodigal	CDS	1302501	1302698	.	+	0	ID=GCA000144955_01227;Name=LSM domain protein;locus_tag=GCA000144955_01227;product=LSM domain protein;Parent=GCA000144955_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217012.1,SO:0001217,UniParc:UPI0001DD9509,UniRef:UniRef100_A0A0U1MJY1,UniRef:UniRef50_A0A7U7JUC0,UniRef:UniRef90_A0A7U7JUC0
contig_1	Pyrodigal	gene	1302918	1303208	.	+	.	ID=GCA000144955_01228_gene;locus_tag=GCA000144955_01228;pseudogene=unitary
contig_1	Pyrodigal	CDS	1302918	1303208	.	+	0	ID=GCA000144955_01228;Name=minor capsid protein;locus_tag=GCA000144955_01228;product=minor capsid protein;pseudogene=unitary;Parent=GCA000144955_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI002006A3B0,UniRef:UniRef90_UPI001EDB7181
contig_1	Pyrodigal	gene	1303166	1303558	.	+	.	ID=GCA000144955_01229_gene;locus_tag=GCA000144955_01229
contig_1	Pyrodigal	CDS	1303166	1303558	.	+	0	ID=GCA000144955_01229;Name=Phage protein;locus_tag=GCA000144955_01229;product=Phage protein;Parent=GCA000144955_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_103245998.1,SO:0001217,UniParc:UPI000310F830,UniRef:UniRef100_UPI000310F830,UniRef:UniRef50_A0A0U1MJV5,UniRef:UniRef90_UPI000A599452
contig_1	Pyrodigal	gene	1303610	1303732	.	+	.	ID=GCA000144955_01230_gene;locus_tag=GCA000144955_01230
contig_1	Pyrodigal	CDS	1303610	1303732	.	+	0	ID=GCA000144955_01230;Name=Phage protein;locus_tag=GCA000144955_01230;product=Phage protein;Parent=GCA000144955_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000027069.1,SO:0001217,UniParc:UPI0001DA24FA,UniRef:UniRef100_A0A0U1MJQ1,UniRef:UniRef50_A0A0D6GTA7,UniRef:UniRef90_A0A0U1MJQ1
contig_1	Pyrodigal	gene	1303935	1304243	.	+	.	ID=GCA000144955_01231_gene;locus_tag=GCA000144955_01231;pseudogene=unitary
contig_1	Pyrodigal	CDS	1303935	1304243	.	+	0	ID=GCA000144955_01231;Name=Phage head morphogenesis protein;locus_tag=GCA000144955_01231;product=Phage head morphogenesis protein;pseudogene=unitary;Parent=GCA000144955_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A6P1X309,UniRef:UniRef90_A0AA40JL49
contig_1	Pyrodigal	gene	1304354	1304467	.	+	.	ID=GCA000144955_01232_gene;locus_tag=GCA000144955_01232
contig_1	Pyrodigal	CDS	1304354	1304467	.	+	0	ID=GCA000144955_01232;Name=Phage Mu protein F like protein;locus_tag=GCA000144955_01232;product=Phage Mu protein F like protein;Parent=GCA000144955_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CC7F4F,UniRef:UniRef100_A0A7U7EV89,UniRef:UniRef50_A0A0H2VFZ5,UniRef:UniRef90_A0A7U7EV89
contig_1	Pyrodigal	gene	1304480	1304728	.	+	.	ID=GCA000144955_01233_gene;locus_tag=GCA000144955_01233
contig_1	Pyrodigal	CDS	1304480	1304728	.	+	0	ID=GCA000144955_01233;Name=hypothetical protein;locus_tag=GCA000144955_01233;product=hypothetical protein;Parent=GCA000144955_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000906227.1,SO:0001217,UniParc:UPI0001DD950C,UniRef:UniRef100_UPI0001DD950C,UniRef:UniRef50_Q2FYX6,UniRef:UniRef90_Q2FYX6
contig_1	Pyrodigal	gene	1304991	1305263	.	+	.	ID=GCA000144955_01234_gene;locus_tag=GCA000144955_01234
contig_1	Pyrodigal	CDS	1304991	1305263	.	+	0	ID=GCA000144955_01234;Name=Phage head morphogenesis protein;locus_tag=GCA000144955_01234;product=Phage head morphogenesis protein;Parent=GCA000144955_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1X8B5
contig_1	Pyrodigal	gene	1305332	1305505	.	+	.	ID=GCA000144955_01235_gene;locus_tag=GCA000144955_01235
contig_1	Pyrodigal	CDS	1305332	1305505	.	+	0	ID=GCA000144955_01235;Name=Bacterial toxin 50 domain-containing protein;locus_tag=GCA000144955_01235;product=Bacterial toxin 50 domain-containing protein;Parent=GCA000144955_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2W2R8G4,UniRef:UniRef90_A0A2W2R8G4
contig_1	Pyrodigal	gene	1305516	1305710	.	+	.	ID=GCA000144955_01236_gene;locus_tag=GCA000144955_01236
contig_1	Pyrodigal	CDS	1305516	1305710	.	+	0	ID=GCA000144955_01236;Name=LSM domain protein;locus_tag=GCA000144955_01236;product=LSM domain protein;Parent=GCA000144955_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217297.1,SO:0001217,UniParc:UPI0001DD950F,UniRef:UniRef100_UPI0001DD950F,UniRef:UniRef50_Q2FYW9,UniRef:UniRef90_Q2FYW9
contig_1	Pyrodigal	gene	1306179	1306370	.	+	.	ID=GCA000144955_01237_gene;locus_tag=GCA000144955_01237
contig_1	Pyrodigal	CDS	1306179	1306370	.	+	0	ID=GCA000144955_01237;Name=LSM domain protein;locus_tag=GCA000144955_01237;product=LSM domain protein;Parent=GCA000144955_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001053371.1,SO:0001217,UniParc:UPI0000054528,UniRef:UniRef100_Q2FYW7,UniRef:UniRef50_Q2FYW7,UniRef:UniRef90_Q2FYW7
contig_1	Pyrodigal	gene	1306939	1307964	.	-	.	ID=GCA000144955_01238_gene;locus_tag=GCA000144955_01238;gene=gLY1
contig_1	Pyrodigal	CDS	1306939	1307964	.	-	0	ID=GCA000144955_01238;Name=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;locus_tag=GCA000144955_01238;product=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;gene=gLY1;Parent=GCA000144955_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2008,COG:E,RefSeq:WP_000622715.1,SO:0001217,UniParc:UPI0001DD96BF,UniRef:UniRef100_UPI0001DD96BF,UniRef:UniRef50_Q2FYW6,UniRef:UniRef90_Q2FYW6
contig_1	Pyrodigal	gene	1308234	1308431	.	+	.	ID=GCA000144955_01239_gene;locus_tag=GCA000144955_01239
contig_1	Pyrodigal	CDS	1308234	1308431	.	+	0	ID=GCA000144955_01239;Name=Phage protein;locus_tag=GCA000144955_01239;product=Phage protein;Parent=GCA000144955_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435067.1,SO:0001217,UniParc:UPI0001DD96C0,UniRef:UniRef100_UPI0001DD96C0,UniRef:UniRef50_G5JMD9,UniRef:UniRef90_A0A6A9GYQ0
contig_1	Pyrodigal	gene	1308488	1309969	.	+	.	ID=GCA000144955_01240_gene;locus_tag=GCA000144955_01240;gene=cls
contig_1	Pyrodigal	CDS	1308488	1309969	.	+	0	ID=GCA000144955_01240;Name=cardiolipin synthase;locus_tag=GCA000144955_01240;product=cardiolipin synthase;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000144955_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,RefSeq:WP_001160613.1,SO:0001217,UniParc:UPI0001DD96C1,UniRef:UniRef100_UPI0001DD96C1,UniRef:UniRef50_Q8CPD8,UniRef:UniRef90_Q5HGA3;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1310151	1311050	.	+	.	ID=GCA000144955_01241_gene;locus_tag=GCA000144955_01241;gene=rbbA
contig_1	Pyrodigal	CDS	1310151	1311050	.	+	0	ID=GCA000144955_01241;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_01241;product=ABC transporter ATP-binding protein;gene=rbbA;Parent=GCA000144955_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,SO:0001217,UniRef:UniRef50_A0A0D6HPC7,UniRef:UniRef90_A0A0D6HPC7
contig_1	Pyrodigal	gene	1311019	1311750	.	+	.	ID=GCA000144955_01242_gene;locus_tag=GCA000144955_01242
contig_1	Pyrodigal	CDS	1311019	1311750	.	+	0	ID=GCA000144955_01242;Name=ABC transporter permease protein;locus_tag=GCA000144955_01242;product=ABC transporter permease protein;Parent=GCA000144955_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000603972.1,SO:0001217,UniParc:UPI0001DD96C3,UniRef:UniRef100_UPI0001DD96C3,UniRef:UniRef50_Q2FYW2,UniRef:UniRef90_A0A077UML7
contig_1	Pyrodigal	gene	1311754	1312845	.	+	.	ID=GCA000144955_01243_gene;locus_tag=GCA000144955_01243
contig_1	Pyrodigal	CDS	1311754	1312845	.	+	0	ID=GCA000144955_01243;Name=histidine kinase;locus_tag=GCA000144955_01243;product=histidine kinase;Parent=GCA000144955_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07778,RefSeq:WP_000670345.1,SO:0001217,UniParc:UPI0001DD96C4,UniRef:UniRef100_UPI0001DD96C4,UniRef:UniRef50_A0A4U9TN42,UniRef:UniRef90_A0A077UJS1;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1312842	1313444	.	+	.	ID=GCA000144955_01244_gene;locus_tag=GCA000144955_01244;gene=citB
contig_1	Pyrodigal	CDS	1312842	1313444	.	+	0	ID=GCA000144955_01244;Name=Response regulator transcription factor;locus_tag=GCA000144955_01244;product=Response regulator transcription factor;gene=citB;Parent=GCA000144955_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_000624454.1,SO:0001217,UniParc:UPI0001DD96C5,UniRef:UniRef100_UPI0001DD96C5,UniRef:UniRef50_Q2FYW0,UniRef:UniRef90_Q2FYW0
contig_1	Pyrodigal	gene	1313554	1313742	.	-	.	ID=GCA000144955_01245_gene;locus_tag=GCA000144955_01245;gene=lapA
contig_1	Pyrodigal	CDS	1313554	1313742	.	-	0	ID=GCA000144955_01245;Name=LapA family protein;locus_tag=GCA000144955_01245;product=LapA family protein;gene=lapA;Parent=GCA000144955_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001027146.1,SO:0001217,UniParc:UPI0001DD96C6,UniRef:UniRef100_UPI0001DD96C6,UniRef:UniRef50_Q2FYV9,UniRef:UniRef90_Q2FYV9
contig_1	Pyrodigal	gene	1313881	1314414	.	+	.	ID=GCA000144955_01246_gene;locus_tag=GCA000144955_01246;gene=nucI
contig_1	Pyrodigal	CDS	1313881	1314414	.	+	0	ID=GCA000144955_01246;Name=thermonuclease NucI;locus_tag=GCA000144955_01246;product=thermonuclease NucI;Dbxref=GO:0003676,GO:0016894;gene=nucI;Parent=GCA000144955_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_000841354.1,SO:0001217,UniParc:UPI0001DD96C7,UniRef:UniRef100_UPI0001DD96C7,UniRef:UniRef50_P43270,UniRef:UniRef90_A0A7U7PYI0;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	1314557	1315411	.	-	.	ID=GCA000144955_01247_gene;locus_tag=GCA000144955_01247
contig_1	Pyrodigal	CDS	1314557	1315411	.	-	0	ID=GCA000144955_01247;Name=NERD domain-containing protein;locus_tag=GCA000144955_01247;product=NERD domain-containing protein;Parent=GCA000144955_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011718.1,SO:0001217,UniParc:UPI0001DD96C8,UniRef:UniRef100_UPI0001DD96C8,UniRef:UniRef50_G5JGH5,UniRef:UniRef90_A0A0E1XGC0
contig_1	Pyrodigal	gene	1315732	1316316	.	+	.	ID=GCA000144955_01248_gene;locus_tag=GCA000144955_01248
contig_1	Pyrodigal	CDS	1315732	1316316	.	+	0	ID=GCA000144955_01248;Name=Phage protein;locus_tag=GCA000144955_01248;product=Phage protein;Parent=GCA000144955_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1S1GQT7,UniRef:UniRef90_A0A7Z7W2Q0
contig_1	Pyrodigal	gene	1316370	1317752	.	-	.	ID=GCA000144955_01249_gene;locus_tag=GCA000144955_01249;gene=metL1
contig_1	Pyrodigal	CDS	1316370	1317752	.	-	0	ID=GCA000144955_01249;Name=aspartate kinase;locus_tag=GCA000144955_01249;product=aspartate kinase;Dbxref=GO:0004072,GO:0009089;gene=metL1;Parent=GCA000144955_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000868656.1,SO:0001217,UniParc:UPI0001DD96CA,UniRef:UniRef100_UPI0001DD96CA,UniRef:UniRef50_A0A6V7RA03,UniRef:UniRef90_A0A077UJG8;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1317943	1319223	.	+	.	ID=GCA000144955_01250_gene;locus_tag=GCA000144955_01250;gene=thrA
contig_1	Pyrodigal	CDS	1317943	1319223	.	+	0	ID=GCA000144955_01250;Name=Homoserine dehydrogenase;locus_tag=GCA000144955_01250;product=Homoserine dehydrogenase;gene=thrA;Parent=GCA000144955_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0460,COG:E,RefSeq:WP_000735862.1,SO:0001217,UniParc:UPI0001DD96CB,UniRef:UniRef100_UPI0001DD96CB,UniRef:UniRef50_B9DP89,UniRef:UniRef90_A0A2K4AHW8
contig_1	Pyrodigal	gene	1319229	1320290	.	+	.	ID=GCA000144955_01251_gene;locus_tag=GCA000144955_01251;gene=thrC
contig_1	Pyrodigal	CDS	1319229	1320290	.	+	0	ID=GCA000144955_01251;Name=threonine synthase;locus_tag=GCA000144955_01251;product=threonine synthase;Dbxref=GO:0004795,GO:0009088;gene=thrC;Parent=GCA000144955_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01733,RefSeq:WP_001255453.1,SO:0001217,UniParc:UPI00019F4E79,UniRef:UniRef100_A0A7Z7QYE9,UniRef:UniRef50_Q9K7E3,UniRef:UniRef90_A0A7Z7QYE9;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	1320292	1321206	.	+	.	ID=GCA000144955_01252_gene;locus_tag=GCA000144955_01252;gene=thrB
contig_1	Pyrodigal	CDS	1320292	1321206	.	+	0	ID=GCA000144955_01252;Name=homoserine kinase;locus_tag=GCA000144955_01252;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000144955_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,RefSeq:WP_000073178.1,SO:0001217,UniParc:UPI0001DD96CC,UniRef:UniRef100_UPI0001DD96CC,UniRef:UniRef50_Q2FYV2,UniRef:UniRef90_Q2FYV2;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	1321264	1322067	.	+	.	ID=GCA000144955_01253_gene;locus_tag=GCA000144955_01253;gene=cof
contig_1	Pyrodigal	CDS	1321264	1322067	.	+	0	ID=GCA000144955_01253;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000144955_01253;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000144955_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_000186321.1,SO:0001217,UniParc:UPI0001DD96CD,UniRef:UniRef100_UPI0001DD96CD,UniRef:UniRef50_Q2FYV1,UniRef:UniRef90_Q2FYV1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	1322395	1322709	.	-	.	ID=GCA000144955_01254_gene;locus_tag=GCA000144955_01254
contig_1	Pyrodigal	CDS	1322395	1322709	.	-	0	ID=GCA000144955_01254;Name=Phage protein;locus_tag=GCA000144955_01254;product=Phage protein;Parent=GCA000144955_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580201.1,SO:0001217,UniParc:UPI00000CAA54,UniRef:UniRef100_A0A7Z7QYQ8,UniRef:UniRef50_B9DP93,UniRef:UniRef90_Q2FYV0
contig_1	Pyrodigal	gene	1322927	1324381	.	-	.	ID=GCA000144955_01255_gene;locus_tag=GCA000144955_01255;gene=lysP
contig_1	Pyrodigal	CDS	1322927	1324381	.	-	0	ID=GCA000144955_01255;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000144955_01255;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000144955_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,RefSeq:WP_000389954.1,SO:0001217,UniParc:UPI0001AE867B,UniRef:UniRef100_A0A6B5AYQ3,UniRef:UniRef50_Q2FYU8,UniRef:UniRef90_Q2FYU8
contig_1	Pyrodigal	gene	1324585	1326102	.	+	.	ID=GCA000144955_01256_gene;locus_tag=GCA000144955_01256;gene=katA
contig_1	Pyrodigal	CDS	1324585	1326102	.	+	0	ID=GCA000144955_01256;Name=Catalase;locus_tag=GCA000144955_01256;product=Catalase;Dbxref=GO:0004096,GO:0005737,GO:0020037,GO:0042542,GO:0042744,GO:0046872;gene=katA;Parent=GCA000144955_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0753,COG:P,KEGG:K03781,RefSeq:WP_000082534.1,SO:0001217,UniParc:UPI0001DD96CE,UniRef:UniRef100_UPI0001DD96CE,UniRef:UniRef50_O52762,UniRef:UniRef90_Q2FYU7;ec_number=1.11.1.6
contig_1	Pyrodigal	gene	1326193	1326342	.	+	.	ID=GCA000144955_01257_gene;locus_tag=GCA000144955_01257;gene=rpmG
contig_1	Pyrodigal	CDS	1326193	1326342	.	+	0	ID=GCA000144955_01257;Name=50S ribosomal protein L33;locus_tag=GCA000144955_01257;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000144955_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265708.1,SO:0001217,UniParc:UPI0000132FC6,UniRef:UniRef100_Q2FYU6,UniRef:UniRef50_Q2FYU6,UniRef:UniRef90_Q2FYU6
contig_1	Pyrodigal	gene	1326796	1327065	.	+	.	ID=GCA000144955_01258_gene;locus_tag=GCA000144955_01258;gene=rpsN
contig_1	Pyrodigal	CDS	1326796	1327065	.	+	0	ID=GCA000144955_01258;Name=30S ribosomal protein S14;locus_tag=GCA000144955_01258;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000144955_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,RefSeq:WP_001085655.1,SO:0001217,UniParc:UPI000005442A,UniRef:UniRef100_Q2FYU5,UniRef:UniRef50_Q5HPK6,UniRef:UniRef90_Q5HPK6
contig_1	Pyrodigal	gene	1327222	1328199	.	+	.	ID=GCA000144955_01259_gene;locus_tag=GCA000144955_01259
contig_1	Pyrodigal	CDS	1327222	1328199	.	+	0	ID=GCA000144955_01259;Name=GMP reductase;locus_tag=GCA000144955_01259;product=GMP reductase;Parent=GCA000144955_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000688126.1,SO:0001217,UniParc:UPI00004B5BDA,UniRef:UniRef100_Q2FYU4,UniRef:UniRef90_Q4L646
contig_1	Pyrodigal	gene	1328374	1329237	.	+	.	ID=GCA000144955_01260_gene;locus_tag=GCA000144955_01260
contig_1	Pyrodigal	CDS	1328374	1329237	.	+	0	ID=GCA000144955_01260;Name=CAP domain-containing protein;locus_tag=GCA000144955_01260;product=CAP domain-containing protein;Parent=GCA000144955_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q49XD3,UniRef:UniRef90_Q2FYU2
contig_1	Pyrodigal	gene	1329617	1330240	.	-	.	ID=GCA000144955_01261_gene;locus_tag=GCA000144955_01261;gene=lexA
contig_1	Pyrodigal	CDS	1329617	1330240	.	-	0	ID=GCA000144955_01261;Name=transcriptional repressor LexA;locus_tag=GCA000144955_01261;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0009432,GO:0045892;gene=lexA;Parent=GCA000144955_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_001208755.1,SO:0001217,UniParc:UPI000012E5C6,UniRef:UniRef100_P65819,UniRef:UniRef50_Q81A92,UniRef:UniRef90_Q2FYU1;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	1330380	1330616	.	+	.	ID=GCA000144955_01262_gene;locus_tag=GCA000144955_01262;gene=sosA
contig_1	Pyrodigal	CDS	1330380	1330616	.	+	0	ID=GCA000144955_01262;Name=DNA damage-induced cell division inhibitor SosA;locus_tag=GCA000144955_01262;product=DNA damage-induced cell division inhibitor SosA;gene=sosA;Parent=GCA000144955_01262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A6K8S2R2,UniRef:UniRef90_A0A6K8S2R2
contig_1	Pyrodigal	gene	1330753	1330992	.	+	.	ID=GCA000144955_01263_gene;locus_tag=GCA000144955_01263;gene=ynzC
contig_1	Pyrodigal	CDS	1330753	1330992	.	+	0	ID=GCA000144955_01263;Name=UPF0291 protein SACOL1376;locus_tag=GCA000144955_01263;product=UPF0291 protein SACOL1376;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000144955_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000071351.1,SO:0001217,UniParc:UPI00000D776D,UniRef:UniRef100_P60076,UniRef:UniRef50_P60076,UniRef:UniRef90_P60076
contig_1	Pyrodigal	gene	1331113	1333101	.	+	.	ID=GCA000144955_01264_gene;locus_tag=GCA000144955_01264;gene=tkt
contig_1	Pyrodigal	CDS	1331113	1333101	.	+	0	ID=GCA000144955_01264;Name=transketolase;locus_tag=GCA000144955_01264;product=transketolase;Dbxref=GO:0004802,GO:0005829,GO:0006098,GO:0006310,GO:0019253,GO:0046872;gene=tkt;Parent=GCA000144955_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_000481451.1,SO:0001217,UniParc:UPI000175C3C5,UniRef:UniRef100_A0A6B5T5M0,UniRef:UniRef50_P22976,UniRef:UniRef90_Q5HG77;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	1333334	1333621	.	+	.	ID=GCA000144955_01265_gene;locus_tag=GCA000144955_01265;gene=yneF
contig_1	Pyrodigal	CDS	1333334	1333621	.	+	0	ID=GCA000144955_01265;Name=UPF0154 protein SaurJH1_1431;locus_tag=GCA000144955_01265;product=UPF0154 protein SaurJH1_1431;Dbxref=GO:0005886;gene=yneF;Parent=GCA000144955_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3763,COG:S,KEGG:K09976,RefSeq:WP_001548645.1,SO:0001217,UniParc:UPI0000696C25,UniRef:UniRef100_P67291,UniRef:UniRef50_P67288,UniRef:UniRef90_P67291
contig_1	Pyrodigal	gene	1333800	1334267	.	+	.	ID=GCA000144955_01266_gene;locus_tag=GCA000144955_01266;gene=ccdC
contig_1	Pyrodigal	CDS	1333800	1334267	.	+	0	ID=GCA000144955_01266;Name=DUF1453 domain-containing protein;locus_tag=GCA000144955_01266;product=DUF1453 domain-containing protein;gene=ccdC;Parent=GCA000144955_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4846,COG:T,RefSeq:WP_000966142.1,SO:0001217,UniParc:UPI00000D7753,UniRef:UniRef100_W8UY14,UniRef:UniRef50_Q2FYT5,UniRef:UniRef90_Q2FYT5
contig_1	Pyrodigal	gene	1334391	1335512	.	+	.	ID=GCA000144955_01267_gene;locus_tag=GCA000144955_01267;gene=sbcD
contig_1	Pyrodigal	CDS	1334391	1335512	.	+	0	ID=GCA000144955_01267;Name=exonuclease subunit SbcD;locus_tag=GCA000144955_01267;product=exonuclease subunit SbcD;Dbxref=GO:0004519,GO:0004527,GO:0006260,GO:0006310,GO:0008408;gene=sbcD;Parent=GCA000144955_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000691294.1,SO:0001217,UniParc:UPI0001DD96D1,UniRef:UniRef100_A0A6B5HLF2,UniRef:UniRef50_Q2FYT4,UniRef:UniRef90_Q2FYT4;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1335516	1338545	.	+	.	ID=GCA000144955_01268_gene;locus_tag=GCA000144955_01268;gene=sbcC
contig_1	Pyrodigal	CDS	1335516	1338545	.	+	0	ID=GCA000144955_01268;Name=exonuclease subunit SbcC;locus_tag=GCA000144955_01268;product=exonuclease subunit SbcC;Dbxref=GO:0004519,GO:0004527,GO:0005524,GO:0006260,GO:0006302,GO:0006310,GO:0016887;gene=sbcC;Parent=GCA000144955_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0419,COG:L,RefSeq:WP_000803143.1,SO:0001217,UniParc:UPI0001DD96D2,UniRef:UniRef100_UPI0001DD96D2,UniRef:UniRef50_Q2FYT3,UniRef:UniRef90_Q2FYT3;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1338616	1338978	.	-	.	ID=GCA000144955_01269_gene;locus_tag=GCA000144955_01269;gene=mscL
contig_1	Pyrodigal	CDS	1338616	1338978	.	-	0	ID=GCA000144955_01269;Name=large conductance mechanosensitive channel protein MscL;locus_tag=GCA000144955_01269;product=large conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0008381,GO:0042802;gene=mscL;Parent=GCA000144955_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,KEGG:K03282,RefSeq:WP_000910489.1,SO:0001217,UniParc:UPI000012F5E4,UniRef:UniRef100_P68805,UniRef:UniRef50_P68805,UniRef:UniRef90_P68805
contig_1	Pyrodigal	gene	1339182	1340828	.	+	.	ID=GCA000144955_01270_gene;locus_tag=GCA000144955_01270;gene=betT
contig_1	Pyrodigal	CDS	1339182	1340828	.	+	0	ID=GCA000144955_01270;Name=Glycine betaine transporter;locus_tag=GCA000144955_01270;product=Glycine betaine transporter;gene=betT;Parent=GCA000144955_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_001088978.1,SO:0001217,UniParc:UPI00000549F5,UniRef:UniRef100_Q2FYT0,UniRef:UniRef50_A0A1D4R1U3,UniRef:UniRef90_A0A7U7JUD7
contig_1	Pyrodigal	gene	1341396	1344101	.	+	.	ID=GCA000144955_01271_gene;locus_tag=GCA000144955_01271;gene=acnA
contig_1	Pyrodigal	CDS	1341396	1344101	.	+	0	ID=GCA000144955_01271;Name=aconitate hydratase AcnA;locus_tag=GCA000144955_01271;product=aconitate hydratase AcnA;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0006099,GO:0019679,GO:0046872,GO:0047456,GO:0051539;gene=acnA;Parent=GCA000144955_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1048,KEGG:K27802,RefSeq:WP_000729748.1,SO:0001217,UniParc:UPI0001DD96D3,UniRef:UniRef100_UPI0001DD96D3,UniRef:UniRef50_Q9RTN7,UniRef:UniRef90_Q8CPC2;ec_number=4.2.1.3
contig_1	Pyrodigal	gene	1344280	1344747	.	+	.	ID=GCA000144955_01272_gene;locus_tag=GCA000144955_01272;gene=menI
contig_1	Pyrodigal	CDS	1344280	1344747	.	+	0	ID=GCA000144955_01272;Name=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;locus_tag=GCA000144955_01272;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;Dbxref=GO:0009234;gene=menI;Parent=GCA000144955_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,KEGG:K07107,RefSeq:WP_000640487.1,SO:0001217,UniParc:UPI00000549F3,UniRef:UniRef100_Q2FYS8,UniRef:UniRef50_Q2FYS8,UniRef:UniRef90_Q2FYS8;ec_number=3.1.2.28
contig_1	Pyrodigal	gene	1344954	1345250	.	-	.	ID=GCA000144955_01273_gene;locus_tag=GCA000144955_01273;gene=yneR
contig_1	Pyrodigal	CDS	1344954	1345250	.	-	0	ID=GCA000144955_01273;Name=putative protein SAR1364;locus_tag=GCA000144955_01273;product=putative protein SAR1364;gene=yneR;Parent=GCA000144955_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4841,COG:S,RefSeq:WP_001165377.1,SO:0001217,UniParc:UPI00000549F2,UniRef:UniRef100_Q2FYS7,UniRef:UniRef50_Q2FYS7,UniRef:UniRef90_Q2FYS7
contig_1	Infernal	gene	1345233	1345493	.	+	.	ID=GCA000144955_01274_gene;locus_tag=GCA000144955_01274;gene=S35
contig_1	Infernal	ncRNA	1345233	1345493	2.1e-11	+	.	ID=GCA000144955_01274;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01274;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01274_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1345627	1346235	.	-	.	ID=GCA000144955_01275_gene;locus_tag=GCA000144955_01275;gene=plsY
contig_1	Pyrodigal	CDS	1345627	1346235	.	-	0	ID=GCA000144955_01275;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA000144955_01275;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772;gene=plsY;Parent=GCA000144955_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_000972779.1,SO:0001217,UniParc:UPI000013A85C,UniRef:UniRef100_P67163,UniRef:UniRef50_Q2FYS6,UniRef:UniRef90_Q2FYS6;ec_number=2.3.1.275
contig_1	Pyrodigal	gene	1346441	1348432	.	+	.	ID=GCA000144955_01276_gene;locus_tag=GCA000144955_01276;gene=parE
contig_1	Pyrodigal	CDS	1346441	1348432	.	+	0	ID=GCA000144955_01276;Name=DNA topoisomerase IV subunit B;locus_tag=GCA000144955_01276;product=DNA topoisomerase IV subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872;gene=parE;Parent=GCA000144955_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,RefSeq:WP_001574370.1,SO:0001217,UniParc:UPI000175BBF1,UniRef:UniRef100_A0A0E1X7H6,UniRef:UniRef50_Q59961,UniRef:UniRef90_Q2FYS5;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1348432	1350834	.	+	.	ID=GCA000144955_01277_gene;locus_tag=GCA000144955_01277;gene=parC
contig_1	Pyrodigal	CDS	1348432	1350834	.	+	0	ID=GCA000144955_01277;Name=DNA topoisomerase IV subunit A;locus_tag=GCA000144955_01277;product=DNA topoisomerase IV subunit A;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006265,GO:0007059,GO:0009330,GO:0019897,GO:0034335;gene=parC;Parent=GCA000144955_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_001289567.1,SO:0001217,UniParc:UPI000175C3C4,UniRef:UniRef100_A0A0D1JPD3,UniRef:UniRef50_P72525,UniRef:UniRef90_Q2FYS4;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1351084	1352544	.	+	.	ID=GCA000144955_01278_gene;locus_tag=GCA000144955_01278;gene=alsT
contig_1	Pyrodigal	CDS	1351084	1352544	.	+	0	ID=GCA000144955_01278;Name=Amino acid carrier protein;locus_tag=GCA000144955_01278;product=Amino acid carrier protein;gene=alsT;Parent=GCA000144955_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000651160.1,SO:0001217,UniParc:UPI00000D7777,UniRef:UniRef100_Q2G2N5,UniRef:UniRef50_A0A078M5B3,UniRef:UniRef90_A0A0U1MK54
contig_1	Pyrodigal	gene	1353044	1353895	.	+	.	ID=GCA000144955_01279_gene;locus_tag=GCA000144955_01279;gene=glcT
contig_1	Pyrodigal	CDS	1353044	1353895	.	+	0	ID=GCA000144955_01279;Name=glucose PTS transporter transcription antiterminator GlcT;locus_tag=GCA000144955_01279;product=glucose PTS transporter transcription antiterminator GlcT;Dbxref=GO:0003723,GO:0045893;gene=glcT;Parent=GCA000144955_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03480,RefSeq:WP_000505018.1,SO:0001217,UniParc:UPI0001DD985C,UniRef:UniRef100_UPI0001DD985C,UniRef:UniRef50_O33618,UniRef:UniRef90_Q2G2N4
contig_1	Pyrodigal	gene	1354090	1355238	.	+	.	ID=GCA000144955_01280_gene;locus_tag=GCA000144955_01280;gene=perM
contig_1	Pyrodigal	CDS	1354090	1355238	.	+	0	ID=GCA000144955_01280;Name=AI-2E family transporter;locus_tag=GCA000144955_01280;product=AI-2E family transporter;gene=perM;Parent=GCA000144955_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000673632.1,SO:0001217,UniParc:UPI0001BAF7E0,UniRef:UniRef100_Q2G2N2,UniRef:UniRef50_Q2G2N2,UniRef:UniRef90_Q2G2N2
contig_1	Pyrodigal	gene	1355719	1358241	.	+	.	ID=GCA000144955_01281_gene;locus_tag=GCA000144955_01281;gene=mprF
contig_1	Pyrodigal	CDS	1355719	1358241	.	+	0	ID=GCA000144955_01281;Name=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;locus_tag=GCA000144955_01281;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;Dbxref=GO:0005886,GO:0006629,GO:0046677,GO:0050071,GO:0055091;gene=mprF;Parent=GCA000144955_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2898,COG:I,KEGG:K14205,RefSeq:WP_001071156.1,SO:0001217,UniParc:UPI0001DD985D,UniRef:UniRef100_UPI0001DD985D,UniRef:UniRef50_Q2G2M2,UniRef:UniRef90_Q2G2M2;ec_number=2.3.2.3
contig_1	Pyrodigal	gene	1358444	1358953	.	-	.	ID=GCA000144955_01282_gene;locus_tag=GCA000144955_01282;gene=msrA1
contig_1	Pyrodigal	CDS	1358444	1358953	.	-	0	ID=GCA000144955_01282;Name=Peptide methionine sulfoxide reductase MsrA 1;locus_tag=GCA000144955_01282;product=Peptide methionine sulfoxide reductase MsrA 1;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA1;Parent=GCA000144955_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_001024830.1,SO:0001217,UniParc:UPI000012F5B2,UniRef:UniRef100_P0A084,UniRef:UniRef50_P0A084,UniRef:UniRef90_P0A084;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1359090	1360073	.	+	.	ID=GCA000144955_01283_gene;locus_tag=GCA000144955_01283;gene=msrR
contig_1	Pyrodigal	CDS	1359090	1360073	.	+	0	ID=GCA000144955_01283;Name=Regulatory protein MsrR;locus_tag=GCA000144955_01283;product=Regulatory protein MsrR;Dbxref=GO:0005886;gene=msrR;Parent=GCA000144955_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000356975.1,SO:0001217,UniParc:UPI00000549E5,UniRef:UniRef100_Q7BHL7,UniRef:UniRef50_Q7BHL7,UniRef:UniRef90_Q7BHL7;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1360161	1360349	.	-	.	ID=GCA000144955_01284_gene;locus_tag=GCA000144955_01284;gene=pptA
contig_1	Pyrodigal	CDS	1360161	1360349	.	-	0	ID=GCA000144955_01284;Name=2-hydroxymuconate tautomerase;locus_tag=GCA000144955_01284;product=2-hydroxymuconate tautomerase;Dbxref=GO:0008152,GO:0016853,GO:0016862;gene=pptA;Parent=GCA000144955_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1942,COG:Q,RefSeq:WP_001548680.1,SO:0001217,UniParc:UPI00000549E3,UniRef:UniRef100_P99132,UniRef:UniRef50_Q814P5,UniRef:UniRef90_P99132;ec_number=5.3.2.6
contig_1	Pyrodigal	gene	1360494	1361756	.	+	.	ID=GCA000144955_01285_gene;locus_tag=GCA000144955_01285;gene=dinP
contig_1	Pyrodigal	CDS	1360494	1361756	.	+	0	ID=GCA000144955_01285;Name=UmuC domain-containing protein;locus_tag=GCA000144955_01285;product=UmuC domain-containing protein;gene=dinP;Parent=GCA000144955_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_000283026.1,SO:0001217,UniParc:UPI00019F4E56,UniRef:UniRef100_A0A7Z7QZ32,UniRef:UniRef50_A0A6N3A9E1,UniRef:UniRef90_Q2FYS2
contig_1	Pyrodigal	gene	1361893	1362984	.	-	.	ID=GCA000144955_01286_gene;locus_tag=GCA000144955_01286;gene=tyrA
contig_1	Pyrodigal	CDS	1361893	1362984	.	-	0	ID=GCA000144955_01286;Name=prephenate dehydrogenase;locus_tag=GCA000144955_01286;product=prephenate dehydrogenase;Dbxref=GO:0004665,GO:0006571,GO:0008977,GO:0070403;gene=tyrA;Parent=GCA000144955_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0287,COG:E,RefSeq:WP_000214292.1,SO:0001217,UniParc:UPI0001DD985E,UniRef:UniRef100_UPI0001DD985E,UniRef:UniRef50_Q2FYS1,UniRef:UniRef90_Q2FYS1;ec_number=1.3.1.12
contig_1	Pyrodigal	gene	1363149	1364180	.	+	.	ID=GCA000144955_01287_gene;locus_tag=GCA000144955_01287;gene=frvX
contig_1	Pyrodigal	CDS	1363149	1364180	.	+	0	ID=GCA000144955_01287;Name=Aminopeptidase;locus_tag=GCA000144955_01287;product=Aminopeptidase;gene=frvX;Parent=GCA000144955_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,KEGG:K01269,RefSeq:WP_000433348.1,SO:0001217,UniParc:UPI0001DD985F,UniRef:UniRef100_UPI0001DD985F,UniRef:UniRef50_O07603,UniRef:UniRef90_A0A0E7NTZ3;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	1364673	1366079	.	+	.	ID=GCA000144955_01288_gene;locus_tag=GCA000144955_01288;gene=trpE
contig_1	Pyrodigal	CDS	1364673	1366079	.	+	0	ID=GCA000144955_01288;Name=anthranilate synthase component I;locus_tag=GCA000144955_01288;product=anthranilate synthase component I;gene=trpE;Parent=GCA000144955_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_000382432.1,SO:0001217,UniParc:UPI0001DD9860,UniRef:UniRef100_UPI0001DD9860,UniRef:UniRef50_A0A6N3A4A0,UniRef:UniRef90_A0A7U7EYB1;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1366076	1366642	.	+	.	ID=GCA000144955_01289_gene;locus_tag=GCA000144955_01289;gene=pabA
contig_1	Pyrodigal	CDS	1366076	1366642	.	+	0	ID=GCA000144955_01289;Name=Anthranilate synthase component II;locus_tag=GCA000144955_01289;product=Anthranilate synthase component II;gene=pabA;Parent=GCA000144955_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000604821.1,SO:0001217,UniParc:UPI0001DD9861,UniRef:UniRef100_UPI0001DD9861,UniRef:UniRef50_B9DP49,UniRef:UniRef90_A0A390DEC3
contig_1	Pyrodigal	gene	1366648	1367646	.	+	.	ID=GCA000144955_01290_gene;locus_tag=GCA000144955_01290;gene=trpD
contig_1	Pyrodigal	CDS	1366648	1367646	.	+	0	ID=GCA000144955_01290;Name=Anthranilate phosphoribosyltransferase;locus_tag=GCA000144955_01290;product=Anthranilate phosphoribosyltransferase;Dbxref=GO:0000162,GO:0000287,GO:0004048,GO:0005829;gene=trpD;Parent=GCA000144955_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,KEGG:K00766,RefSeq:WP_000173824.1,SO:0001217,UniParc:UPI0001DD9862,UniRef:UniRef100_UPI0001DD9862,UniRef:UniRef50_Q2FYR7,UniRef:UniRef90_Q2FYR7;ec_number=2.4.2.18
contig_1	Pyrodigal	gene	1367648	1368430	.	+	.	ID=GCA000144955_01291_gene;locus_tag=GCA000144955_01291;gene=trpC
contig_1	Pyrodigal	CDS	1367648	1368430	.	+	0	ID=GCA000144955_01291;Name=indole-3-glycerol phosphate synthase TrpC;locus_tag=GCA000144955_01291;product=indole-3-glycerol phosphate synthase TrpC;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpC;Parent=GCA000144955_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0134,COG:E,RefSeq:WP_000153615.1,SO:0001217,UniParc:UPI0001DD9863,UniRef:UniRef100_UPI0001DD9863,UniRef:UniRef50_Q2FYR6,UniRef:UniRef90_Q2FYR6;ec_number=4.1.1.48
contig_1	Pyrodigal	gene	1368427	1369062	.	+	.	ID=GCA000144955_01292_gene;locus_tag=GCA000144955_01292;gene=trpF
contig_1	Pyrodigal	CDS	1368427	1369062	.	+	0	ID=GCA000144955_01292;Name=phosphoribosylanthranilate isomerase;locus_tag=GCA000144955_01292;product=phosphoribosylanthranilate isomerase;Dbxref=GO:0000162,GO:0004640,GO:0006568;gene=trpF;Parent=GCA000144955_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FYR5,UniRef:UniRef90_Q6GH34;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1369055	1369402	.	+	.	ID=GCA000144955_01293_gene;locus_tag=GCA000144955_01293
contig_1	Pyrodigal	CDS	1369055	1369402	.	+	0	ID=GCA000144955_01293;Name=Tryptophan synthase beta chain;locus_tag=GCA000144955_01293;product=Tryptophan synthase beta chain;Parent=GCA000144955_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380FGT9
contig_1	Pyrodigal	gene	1369377	1370270	.	+	.	ID=GCA000144955_01294_gene;locus_tag=GCA000144955_01294;gene=trpB;pseudogene=unitary
contig_1	Pyrodigal	CDS	1369377	1370270	.	+	0	ID=GCA000144955_01294;Name=tryptophan synthase subunit beta;locus_tag=GCA000144955_01294;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;pseudogene=unitary;gene=trpB;Parent=GCA000144955_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,SO:0001217,UniRef:UniRef50_P07600,UniRef:UniRef90_Q2FYR4;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1370263	1370991	.	+	.	ID=GCA000144955_01295_gene;locus_tag=GCA000144955_01295;gene=trpA
contig_1	Pyrodigal	CDS	1370263	1370991	.	+	0	ID=GCA000144955_01295;Name=tryptophan synthase subunit alpha;locus_tag=GCA000144955_01295;product=tryptophan synthase subunit alpha;Dbxref=GO:0000162,GO:0004834,GO:0005829,GO:0006568;gene=trpA;Parent=GCA000144955_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0159,COG:E,KEGG:K01695,RefSeq:WP_000163622.1,SO:0001217,UniParc:UPI0001DD9865,UniRef:UniRef100_UPI0001DD9865,UniRef:UniRef50_Q2FYR3,UniRef:UniRef90_Q2FYR3;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1371313	1372575	.	+	.	ID=GCA000144955_01296_gene;locus_tag=GCA000144955_01296;gene=femA
contig_1	Pyrodigal	CDS	1371313	1372575	.	+	0	ID=GCA000144955_01296;Name=glycine glycyltransferase FemA;locus_tag=GCA000144955_01296;product=glycine glycyltransferase FemA;Dbxref=GO:0000166,GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femA;Parent=GCA000144955_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673309,COG:COG2348,COG:M,SO:0001217,UniRef:UniRef50_Q2FYR2,UniRef:UniRef90_Q2FYR2;ec_number=2.3.2.17
contig_1	Pyrodigal	gene	1372594	1373853	.	+	.	ID=GCA000144955_01297_gene;locus_tag=GCA000144955_01297;gene=femB
contig_1	Pyrodigal	CDS	1372594	1373853	.	+	0	ID=GCA000144955_01297;Name=glycine glycyltransferase FemB;locus_tag=GCA000144955_01297;product=glycine glycyltransferase FemB;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0071555;gene=femB;Parent=GCA000144955_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673098,COG:COG2348,COG:M,KEGG:K11695,RefSeq:WP_000673111.1,SO:0001217,UniParc:UPI0001DD9867,UniRef:UniRef100_UPI0001DD9867,UniRef:UniRef50_Q2FYR1,UniRef:UniRef90_Q2FYR1;ec_number=2.3.2.18
contig_1	Pyrodigal	gene	1374104	1374850	.	+	.	ID=GCA000144955_01298_gene;locus_tag=GCA000144955_01298;gene=vanZ
contig_1	Pyrodigal	CDS	1374104	1374850	.	+	0	ID=GCA000144955_01298;Name=VanZ family protein;locus_tag=GCA000144955_01298;product=VanZ family protein;gene=vanZ;Parent=GCA000144955_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001079529.1,SO:0001217,UniParc:UPI0001DD9868,UniRef:UniRef100_UPI0001DD9868,UniRef:UniRef50_A0A0H3K2Z0,UniRef:UniRef90_A0A0H3K2Z0
contig_1	Pyrodigal	gene	1375060	1375827	.	+	.	ID=GCA000144955_01299_gene;locus_tag=GCA000144955_01299
contig_1	Pyrodigal	CDS	1375060	1375827	.	+	0	ID=GCA000144955_01299;Name=Cof-like hydrolase;locus_tag=GCA000144955_01299;product=Cof-like hydrolase;Parent=GCA000144955_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673596.1,SO:0001217,UniParc:UPI0001DD9869,UniRef:UniRef100_UPI0001DD9869,UniRef:UniRef50_Q2FYR0,UniRef:UniRef90_A0A0U1MKI6
contig_1	Pyrodigal	gene	1375879	1376358	.	-	.	ID=GCA000144955_01300_gene;locus_tag=GCA000144955_01300
contig_1	Pyrodigal	CDS	1375879	1376358	.	-	0	ID=GCA000144955_01300;Name=SWIM zinc finger family protein;locus_tag=GCA000144955_01300;product=SWIM zinc finger family protein;Parent=GCA000144955_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000523672.1,SO:0001217,UniParc:UPI0001DD986A,UniRef:UniRef100_UPI0001DD986A,UniRef:UniRef50_Q2FYQ9,UniRef:UniRef90_A0A0U1MM71
contig_1	Pyrodigal	gene	1376479	1377180	.	-	.	ID=GCA000144955_01301_gene;locus_tag=GCA000144955_01301
contig_1	Pyrodigal	CDS	1376479	1377180	.	-	0	ID=GCA000144955_01301;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000144955_01301;product=ATP-binding cassette domain-containing protein;Parent=GCA000144955_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000571262.1,SO:0001217,UniParc:UPI0001DD986B,UniRef:UniRef100_UPI0001DD986B,UniRef:UniRef50_Q2FYQ8,UniRef:UniRef90_A0A0U1MKF6
contig_1	Pyrodigal	gene	1377173	1377946	.	-	.	ID=GCA000144955_01302_gene;locus_tag=GCA000144955_01302;gene=oppD2
contig_1	Pyrodigal	CDS	1377173	1377946	.	-	0	ID=GCA000144955_01302;Name=Putative oligopeptide transport ATP-binding protein oppD2;locus_tag=GCA000144955_01302;product=Putative oligopeptide transport ATP-binding protein oppD2;gene=oppD2;Parent=GCA000144955_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000052305.1,SO:0001217,UniParc:UPI0001DD986C,UniRef:UniRef100_UPI0001DD986C,UniRef:UniRef50_Q2FYQ7,UniRef:UniRef90_A0A7U7PY71
contig_1	Pyrodigal	gene	1377933	1378700	.	-	.	ID=GCA000144955_01303_gene;locus_tag=GCA000144955_01303;gene=nikC
contig_1	Pyrodigal	CDS	1377933	1378700	.	-	0	ID=GCA000144955_01303;Name=nickel transporter permease;locus_tag=GCA000144955_01303;product=nickel transporter permease;Dbxref=GO:0043190,GO:0140359;gene=nikC;Parent=GCA000144955_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FYQ6,UniRef:UniRef90_A0A0U1MKI9
contig_1	Pyrodigal	gene	1378756	1379742	.	-	.	ID=GCA000144955_01304_gene;locus_tag=GCA000144955_01304;gene=nikB
contig_1	Pyrodigal	CDS	1378756	1379742	.	-	0	ID=GCA000144955_01304;Name=nickel ABC transporter permease;locus_tag=GCA000144955_01304;product=nickel ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=nikB;Parent=GCA000144955_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000480821.1,SO:0001217,UniParc:UPI0001DD986E,UniRef:UniRef100_UPI0001DD986E,UniRef:UniRef50_Q2FYQ5,UniRef:UniRef90_A0A0U1MM81
contig_1	Pyrodigal	gene	1380073	1380417	.	-	.	ID=GCA000144955_01305_gene;locus_tag=GCA000144955_01305
contig_1	Pyrodigal	CDS	1380073	1380417	.	-	0	ID=GCA000144955_01305;Name=Permease;locus_tag=GCA000144955_01305;product=Permease;Parent=GCA000144955_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171802.1,SO:0001217,UniParc:UPI0001DD986F,UniRef:UniRef100_UPI0001DD986F,UniRef:UniRef50_A0A3A0VJ57,UniRef:UniRef90_Q2FYQ3
contig_1	Pyrodigal	gene	1380624	1382438	.	+	.	ID=GCA000144955_01306_gene;locus_tag=GCA000144955_01306;gene=pepF
contig_1	Pyrodigal	CDS	1380624	1382438	.	+	0	ID=GCA000144955_01306;Name=oligoendopeptidase F;locus_tag=GCA000144955_01306;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000144955_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000077551.1,SO:0001217,UniParc:UPI0001DD9870,UniRef:UniRef100_UPI0001DD9870,UniRef:UniRef50_A0A7X9ZKX9,UniRef:UniRef90_A0A641AAT8;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1382578	1383219	.	-	.	ID=GCA000144955_01307_gene;locus_tag=GCA000144955_01307;gene=phoU
contig_1	Pyrodigal	CDS	1382578	1383219	.	-	0	ID=GCA000144955_01307;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000144955_01307;product=phosphate signaling complex protein PhoU;Dbxref=GO:0006817,GO:0030643,GO:0045936;gene=phoU;Parent=GCA000144955_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0704,COG:P,RefSeq:WP_000974847.1,SO:0001217,UniParc:UPI00000549CE,UniRef:UniRef100_Q2FYQ1,UniRef:UniRef50_A0A4R6BXI3,UniRef:UniRef90_A0A2K4AIT2
contig_1	Pyrodigal	gene	1383226	1384077	.	-	.	ID=GCA000144955_01308_gene;locus_tag=GCA000144955_01308;gene=pstB
contig_1	Pyrodigal	CDS	1383226	1384077	.	-	0	ID=GCA000144955_01308;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000144955_01308;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000144955_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_000079444.1,SO:0001217,UniParc:UPI0001DD9871,UniRef:UniRef100_UPI0001DD9871,UniRef:UniRef50_Q2FYQ0,UniRef:UniRef90_Q2FYQ0;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1384124	1385041	.	-	.	ID=GCA000144955_01309_gene;locus_tag=GCA000144955_01309;gene=pstA
contig_1	Pyrodigal	CDS	1384124	1385041	.	-	0	ID=GCA000144955_01309;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000144955_01309;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstA;Parent=GCA000144955_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0581,COG:P,RefSeq:WP_000450296.1,SO:0001217,UniParc:UPI0001DD9872,UniRef:UniRef100_UPI0001DD9872,UniRef:UniRef50_B9E6T5,UniRef:UniRef90_A0A380EIN5
contig_1	Pyrodigal	gene	1385043	1385969	.	-	.	ID=GCA000144955_01310_gene;locus_tag=GCA000144955_01310;gene=pstC
contig_1	Pyrodigal	CDS	1385043	1385969	.	-	0	ID=GCA000144955_01310;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000144955_01310;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstC;Parent=GCA000144955_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0573,COG:P,RefSeq:WP_000204625.1,SO:0001217,UniParc:UPI00000D9DE2,UniRef:UniRef100_Q2FYP8,UniRef:UniRef50_A0A235FA99,UniRef:UniRef90_A0A380EHK1
contig_1	Pyrodigal	gene	1386160	1387143	.	-	.	ID=GCA000144955_01311_gene;locus_tag=GCA000144955_01311;gene=pstS
contig_1	Pyrodigal	CDS	1386160	1387143	.	-	0	ID=GCA000144955_01311;Name=Phosphate-binding protein PstS;locus_tag=GCA000144955_01311;product=Phosphate-binding protein PstS;Dbxref=GO:0005886,GO:0006817,GO:0042301;gene=pstS;Parent=GCA000144955_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0226,COG:P,RefSeq:WP_000759225.1,SO:0001217,UniParc:UPI0001DD9873,UniRef:UniRef100_UPI0001DD9873,UniRef:UniRef50_Q49XJ1,UniRef:UniRef90_Q2FYP6
contig_1	Pyrodigal	gene	1387608	1388510	.	-	.	ID=GCA000144955_01312_gene;locus_tag=GCA000144955_01312;gene=cvfB
contig_1	Pyrodigal	CDS	1387608	1388510	.	-	0	ID=GCA000144955_01312;Name=RNA-binding virulence regulatory protein CvfB;locus_tag=GCA000144955_01312;product=RNA-binding virulence regulatory protein CvfB;gene=cvfB;Parent=GCA000144955_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001095445,BlastRules:WP_001162352,RefSeq:WP_001162346.1,SO:0001217,UniParc:UPI0001DD9874,UniRef:UniRef100_UPI0001DD9874,UniRef:UniRef50_Q2FYP3,UniRef:UniRef90_Q2FYP3
contig_1	Pyrodigal	gene	1388657	1390258	.	+	.	ID=GCA000144955_01313_gene;locus_tag=GCA000144955_01313;gene=uup
contig_1	Pyrodigal	CDS	1388657	1390258	.	+	0	ID=GCA000144955_01313;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_01313;product=ABC transporter domain-containing protein;gene=uup;Parent=GCA000144955_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000942304.1,SO:0001217,UniParc:UPI0001DD99FB,UniRef:UniRef100_A0A7U7JUP6,UniRef:UniRef50_R5Y8E8,UniRef:UniRef90_S2YJP1
contig_1	Infernal	regulatory_region	1390614	1390789	2.6e-15	+	.	ID=BPGLLONNDN_165;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1390871	1392076	.	+	.	ID=GCA000144955_01314_gene;locus_tag=GCA000144955_01314;gene=metL1
contig_1	Pyrodigal	CDS	1390871	1392076	.	+	0	ID=GCA000144955_01314;Name=aspartate kinase;locus_tag=GCA000144955_01314;product=aspartate kinase;gene=metL1;Parent=GCA000144955_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000258728.1,SO:0001217,UniParc:UPI0001B3B10A,UniRef:UniRef100_A0A2S6D2I9,UniRef:UniRef50_B9EBZ4,UniRef:UniRef90_A0A0H2WZ50;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1392140	1393129	.	+	.	ID=GCA000144955_01315_gene;locus_tag=GCA000144955_01315;gene=asd
contig_1	Pyrodigal	CDS	1392140	1393129	.	+	0	ID=GCA000144955_01315;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000144955_01315;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0008652,GO:0016620,GO:0051287;gene=asd;Parent=GCA000144955_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_000163537.1,SO:0001217,UniParc:UPI0001DD99FC,UniRef:UniRef100_UPI0001DD99FC,UniRef:UniRef50_A0A2T4PUK5,UniRef:UniRef90_A0A7Z7QZD9;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	1393131	1394018	.	+	.	ID=GCA000144955_01316_gene;locus_tag=GCA000144955_01316;gene=dapA
contig_1	Pyrodigal	CDS	1393131	1394018	.	+	0	ID=GCA000144955_01316;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000144955_01316;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000144955_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_000149282.1,SO:0001217,UniParc:UPI0001DD99FD,UniRef:UniRef100_UPI0001DD99FD,UniRef:UniRef50_Q6GH13,UniRef:UniRef90_Q6GH13;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	1394015	1394737	.	+	.	ID=GCA000144955_01317_gene;locus_tag=GCA000144955_01317;gene=dapB
contig_1	Pyrodigal	CDS	1394015	1394737	.	+	0	ID=GCA000144955_01317;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000144955_01317;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0008839,GO:0009089,GO:0016726,GO:0019877,GO:0050661,GO:0051287;gene=dapB;Parent=GCA000144955_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_000698239.1,SO:0001217,UniParc:UPI0001C0B960,UniRef:UniRef100_A0A0D1FNM6,UniRef:UniRef50_Q9EZ11,UniRef:UniRef90_Q9EZ11;ec_number=1.17.1.8
contig_1	Pyrodigal	gene	1394763	1395482	.	+	.	ID=GCA000144955_01318_gene;locus_tag=GCA000144955_01318;gene=dapD
contig_1	Pyrodigal	CDS	1394763	1395482	.	+	0	ID=GCA000144955_01318;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;locus_tag=GCA000144955_01318;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;Dbxref=GO:0009089,GO:0047200;gene=dapD;Parent=GCA000144955_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05822,RefSeq:WP_000249834.1,SO:0001217,UniParc:UPI0001DD99FE,UniRef:UniRef100_UPI0001DD99FE,UniRef:UniRef50_A8F8L8,UniRef:UniRef90_UPI0001DD99FE;ec_number=2.3.1.89
contig_1	Pyrodigal	gene	1395625	1396776	.	+	.	ID=GCA000144955_01319_gene;locus_tag=GCA000144955_01319;gene=abgB
contig_1	Pyrodigal	CDS	1395625	1396776	.	+	0	ID=GCA000144955_01319;Name=putative hydrolase SAS1339;locus_tag=GCA000144955_01319;product=putative hydrolase SAS1339;Dbxref=GO:0016787;gene=abgB;Parent=GCA000144955_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001003797.1,SO:0001217,UniParc:UPI0001DD99FF,UniRef:UniRef100_A0AAW9XG61,UniRef:UniRef50_Q2FYN6,UniRef:UniRef90_Q2FYN6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1396781	1397866	.	+	.	ID=GCA000144955_01320_gene;locus_tag=GCA000144955_01320;gene=alr2
contig_1	Pyrodigal	CDS	1396781	1397866	.	+	0	ID=GCA000144955_01320;Name=Alanine racemase 2;locus_tag=GCA000144955_01320;product=Alanine racemase 2;Dbxref=GO:0005829,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr2;Parent=GCA000144955_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_000127587.1,SO:0001217,UniParc:UPI0001DD9A00,UniRef:UniRef100_UPI0001DD9A00,UniRef:UniRef50_Q9EZ08,UniRef:UniRef90_Q9EZ08;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	1397856	1399121	.	+	.	ID=GCA000144955_01321_gene;locus_tag=GCA000144955_01321;gene=lysA
contig_1	Pyrodigal	CDS	1397856	1399121	.	+	0	ID=GCA000144955_01321;Name=diaminopimelate decarboxylase;locus_tag=GCA000144955_01321;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0030170,GO:0046677;gene=lysA;Parent=GCA000144955_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_000216959.1,SO:0001217,UniParc:UPI0001DD9A01,UniRef:UniRef100_UPI0001DD9A01,UniRef:UniRef50_Q5HG20,UniRef:UniRef90_Q5HG20;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	1399200	1399817	.	-	.	ID=GCA000144955_01322_gene;locus_tag=GCA000144955_01322
contig_1	Pyrodigal	CDS	1399200	1399817	.	-	0	ID=GCA000144955_01322;Name=Protease synthase and sporulation negative regulatory protein PAI 2;locus_tag=GCA000144955_01322;product=Protease synthase and sporulation negative regulatory protein PAI 2;Parent=GCA000144955_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07734,RefSeq:WP_000558416.1,SO:0001217,UniParc:UPI0001DD9A02,UniRef:UniRef100_UPI0001DD9A02,UniRef:UniRef50_A0A511ZMC4,UniRef:UniRef90_A0A380DT15
contig_1	Pyrodigal	gene	1399951	1400352	.	-	.	ID=GCA000144955_01323_gene;locus_tag=GCA000144955_01323;gene=msaC
contig_1	Pyrodigal	CDS	1399951	1400352	.	-	0	ID=GCA000144955_01323;Name=sarA expression modulator MsaC;locus_tag=GCA000144955_01323;product=sarA expression modulator MsaC;gene=msaC;Parent=GCA000144955_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876201,RefSeq:WP_000876216.1,SO:0001217,UniParc:UPI0001DD9A03,UniRef:UniRef100_UPI0001DD9A03,UniRef:UniRef50_Q2FYN3,UniRef:UniRef90_A0A6A9GTT8
contig_1	Pyrodigal	gene	1400549	1400749	.	-	.	ID=GCA000144955_01324_gene;locus_tag=GCA000144955_01324;gene=cspA
contig_1	Pyrodigal	CDS	1400549	1400749	.	-	0	ID=GCA000144955_01324;Name=cold shock protein CspA;locus_tag=GCA000144955_01324;product=cold shock protein CspA;Dbxref=GO:0003676,GO:0005737;gene=cspA;Parent=GCA000144955_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000809131,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_000809131.1,SO:0001217,UniParc:UPI00000D7888,UniRef:UniRef100_Q2FYN2,UniRef:UniRef50_P42016,UniRef:UniRef90_Q2FYN2
contig_1	Pyrodigal	gene	1400920	1401228	.	-	.	ID=GCA000144955_01325_gene;locus_tag=GCA000144955_01325;gene=msaA
contig_1	Pyrodigal	CDS	1400920	1401228	.	-	0	ID=GCA000144955_01325;Name=regulatory protein MsaA;locus_tag=GCA000144955_01325;product=regulatory protein MsaA;gene=msaA;Parent=GCA000144955_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000269923,COG:COG4699,COG:S,RefSeq:WP_000269923.1,SO:0001217,UniParc:UPI0000054A76,UniRef:UniRef100_Q2FYN0,UniRef:UniRef50_Q2FYN0,UniRef:UniRef90_Q2FYN0
contig_1	Pyrodigal	gene	1401391	1401660	.	+	.	ID=GCA000144955_01326_gene;locus_tag=GCA000144955_01326;gene=acyP
contig_1	Pyrodigal	CDS	1401391	1401660	.	+	0	ID=GCA000144955_01326;Name=acylphosphatase;locus_tag=GCA000144955_01326;product=acylphosphatase;Dbxref=GO:0003998,GO:0008270,GO:0016743,GO:0051604;gene=acyP;Parent=GCA000144955_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1254,RefSeq:WP_001215907.1,SO:0001217,UniParc:UPI00000D7703,UniRef:UniRef100_Q2FYM9,UniRef:UniRef50_Q4L6A9,UniRef:UniRef90_Q2FYM9;ec_number=3.6.1.7
contig_1	Pyrodigal	gene	1401685	1402308	.	+	.	ID=GCA000144955_01327_gene;locus_tag=GCA000144955_01327;gene=xpaC
contig_1	Pyrodigal	CDS	1401685	1402308	.	+	0	ID=GCA000144955_01327;Name=5-bromo-4-chloroindolyl phosphate hydrolase;locus_tag=GCA000144955_01327;product=5-bromo-4-chloroindolyl phosphate hydrolase;gene=xpaC;Parent=GCA000144955_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4915,COG:QR,SO:0001217,UniParc:UPI00000D787B,UniRef:UniRef100_A0A7I0YLW0,UniRef:UniRef50_K9AM25,UniRef:UniRef90_Q2FYM8
contig_1	Pyrodigal	gene	1402340	1403476	.	+	.	ID=GCA000144955_01328_gene;locus_tag=GCA000144955_01328;gene=yaaN
contig_1	Pyrodigal	CDS	1402340	1403476	.	+	0	ID=GCA000144955_01328;Name=TelA-like protein MW1294;locus_tag=GCA000144955_01328;product=TelA-like protein MW1294;gene=yaaN;Parent=GCA000144955_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3853,COG:V,RefSeq:WP_000138416.1,SO:0001217,UniParc:UPI0001DD9A04,UniRef:UniRef100_UPI0001DD9A04,UniRef:UniRef50_Q49XK7,UniRef:UniRef90_Q2FYM7
contig_1	Pyrodigal	gene	1403549	1404892	.	-	.	ID=GCA000144955_01329_gene;locus_tag=GCA000144955_01329;gene=brnQ
contig_1	Pyrodigal	CDS	1403549	1404892	.	-	0	ID=GCA000144955_01329;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000144955_01329;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015658,GO:0015803,GO:0015818,GO:0015820,GO:0016020;gene=brnQ;Parent=GCA000144955_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_001039261.1,SO:0001217,UniParc:UPI0001DD9A05,UniRef:UniRef100_UPI0001DD9A05,UniRef:UniRef50_Q2FYM4,UniRef:UniRef90_Q2FYM4
contig_1	Pyrodigal	gene	1405117	1407003	.	-	.	ID=GCA000144955_01330_gene;locus_tag=GCA000144955_01330;gene=norD
contig_1	Pyrodigal	CDS	1405117	1407003	.	-	0	ID=GCA000144955_01330;Name=Nitric oxide reductase activation protein NorD;locus_tag=GCA000144955_01330;product=Nitric oxide reductase activation protein NorD;gene=norD;Parent=GCA000144955_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4548,COG:P,RefSeq:WP_001283671.1,SO:0001217,UniParc:UPI0001DD9A06,UniRef:UniRef100_UPI0001DD9A06,UniRef:UniRef50_A0A380G8L3,UniRef:UniRef90_A0A5N5IGR7
contig_1	Pyrodigal	gene	1407017	1407808	.	-	.	ID=GCA000144955_01331_gene;locus_tag=GCA000144955_01331;gene=mMP0363
contig_1	Pyrodigal	CDS	1407017	1407808	.	-	0	ID=GCA000144955_01331;Name=putative protein SAOUHSC_01413;locus_tag=GCA000144955_01331;product=putative protein SAOUHSC_01413;Dbxref=GO:0005524,GO:0016887;gene=mMP0363;Parent=GCA000144955_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_001185421.1,SO:0001217,UniParc:UPI0000054A6B,UniRef:UniRef100_Q2G2J8,UniRef:UniRef50_Q49XL1,UniRef:UniRef90_Q2G2J8
contig_1	Pyrodigal	gene	1407989	1408192	.	-	.	ID=GCA000144955_01332_gene;locus_tag=GCA000144955_01332
contig_1	Pyrodigal	CDS	1407989	1408192	.	-	0	ID=GCA000144955_01332;Name=Phage protein;locus_tag=GCA000144955_01332;product=Phage protein;Parent=GCA000144955_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902175.1,SO:0001217,UniParc:UPI0000054A6A,UniRef:UniRef100_Q2G2J7,UniRef:UniRef50_Q2G2J7,UniRef:UniRef90_Q2G2J7
contig_1	Pyrodigal	gene	1408221	1409030	.	-	.	ID=GCA000144955_01333_gene;locus_tag=GCA000144955_01333
contig_1	Pyrodigal	CDS	1408221	1409030	.	-	0	ID=GCA000144955_01333;Name=VOC domain-containing protein;locus_tag=GCA000144955_01333;product=VOC domain-containing protein;Parent=GCA000144955_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000334509.1,SO:0001217,UniParc:UPI0001DD9A07,UniRef:UniRef100_A0A6A9GW74,UniRef:UniRef50_A0A6N3AGB1,UniRef:UniRef90_Q2FYM3
contig_1	Pyrodigal	gene	1409610	1410878	.	-	.	ID=GCA000144955_01334_gene;locus_tag=GCA000144955_01334;gene=sucB
contig_1	Pyrodigal	CDS	1409610	1410878	.	-	0	ID=GCA000144955_01334;Name=dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000144955_01334;product=dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0005829,GO:0006099,GO:0033512,GO:0045252;gene=sucB;Parent=GCA000144955_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_001115453.1,SO:0001217,UniParc:UPI0001DD9A08,UniRef:UniRef100_UPI0001DD9A08,UniRef:UniRef50_Q2FYM2,UniRef:UniRef90_Q2FYM2;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	1410892	1413690	.	-	.	ID=GCA000144955_01335_gene;locus_tag=GCA000144955_01335;gene=odhA
contig_1	Pyrodigal	CDS	1410892	1413690	.	-	0	ID=GCA000144955_01335;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000144955_01335;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0005829,GO:0006096,GO:0006099,GO:0030976,GO:0045252;gene=odhA;Parent=GCA000144955_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_000180685.1,SO:0001217,UniParc:UPI0001DD9A09,UniRef:UniRef100_UPI0001DD9A09,UniRef:UniRef50_P0C601,UniRef:UniRef90_P0C601;ec_number=1.2.4.2
contig_1	Pyrodigal	gene	1413974	1415329	.	-	.	ID=GCA000144955_01336_gene;locus_tag=GCA000144955_01336;gene=arlS
contig_1	Pyrodigal	CDS	1413974	1415329	.	-	0	ID=GCA000144955_01336;Name=sensor histidine kinase ArlS;locus_tag=GCA000144955_01336;product=sensor histidine kinase ArlS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=arlS;Parent=GCA000144955_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166801,COG:COG5002,COG:T,KEGG:K18940,RefSeq:WP_000166793.1,SO:0001217,UniParc:UPI00003B1681,UniRef:UniRef100_Q6GGZ4,UniRef:UniRef50_Q9KJN3,UniRef:UniRef90_Q9KJN3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1415326	1415985	.	-	.	ID=GCA000144955_01337_gene;locus_tag=GCA000144955_01337;gene=arlR
contig_1	Pyrodigal	CDS	1415326	1415985	.	-	0	ID=GCA000144955_01337;Name=response regulator transcription factor ArlR;locus_tag=GCA000144955_01337;product=response regulator transcription factor ArlR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=arlR;Parent=GCA000144955_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000192137,KEGG:K18941,RefSeq:WP_000192137.1,SO:0001217,UniParc:UPI000002E8B9,UniRef:UniRef100_Q9KJN4,UniRef:UniRef50_Q9KJN4,UniRef:UniRef90_Q9KJN4
contig_1	Infernal	gene	1416564	1416820	.	+	.	ID=GCA000144955_01338_gene;locus_tag=GCA000144955_01338;gene=S35
contig_1	Infernal	ncRNA	1416564	1416820	1.4e-25	+	.	ID=GCA000144955_01338;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01338;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01338_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1416928	1417128	.	-	.	ID=GCA000144955_01339_gene;locus_tag=GCA000144955_01339
contig_1	Pyrodigal	CDS	1416928	1417128	.	-	0	ID=GCA000144955_01339;Name=Transposase;locus_tag=GCA000144955_01339;product=Transposase;Parent=GCA000144955_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184337.1,SO:0001217,UniParc:UPI00019F4E37,UniRef:UniRef100_A0A7Z7QYW6,UniRef:UniRef50_Q2FYL7,UniRef:UniRef90_Q2FYL7
contig_1	Infernal	gene	1417051	1417231	.	+	.	ID=GCA000144955_01340_gene;locus_tag=GCA000144955_01340;gene=tsr25
contig_1	Infernal	ncRNA	1417051	1417231	3.3e-37	+	.	ID=GCA000144955_01340;Name=S. aureus tsr25 small RNA;locus_tag=GCA000144955_01340;product=S. aureus tsr25 small RNA;Dbxref=RFAM:RF02578;Parent=GCA000144955_01340_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02578
contig_1	Pyrodigal	gene	1417244	1417858	.	-	.	ID=GCA000144955_01341_gene;locus_tag=GCA000144955_01341;gene=pgpB
contig_1	Pyrodigal	CDS	1417244	1417858	.	-	0	ID=GCA000144955_01341;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000144955_01341;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000144955_01341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000084781.1,SO:0001217,UniParc:UPI0001AE870E,UniRef:UniRef100_A0AAN2D5G2,UniRef:UniRef50_Q2FYL6,UniRef:UniRef90_Q2FYL6
contig_1	Pyrodigal	gene	1417875	1418945	.	-	.	ID=GCA000144955_01342_gene;locus_tag=GCA000144955_01342;gene=murG
contig_1	Pyrodigal	CDS	1417875	1418945	.	-	0	ID=GCA000144955_01342;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000144955_01342;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000144955_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_000160911.1,SO:0001217,UniParc:UPI0001DD9A0A,UniRef:UniRef100_UPI0001DD9A0A,UniRef:UniRef50_Q2FYL5,UniRef:UniRef90_Q2FYL5;ec_number=2.4.1.227
contig_1	Infernal	gene	1418243	1418417	.	+	.	ID=GCA000144955_01343_gene;locus_tag=GCA000144955_01343;gene=S414
contig_1	Infernal	ncRNA	1418243	1418417	2.2e-24	+	.	ID=GCA000144955_01343;Name=Staphylococcus sRNA 414;locus_tag=GCA000144955_01343;product=Staphylococcus sRNA 414;Dbxref=RFAM:RF02895;Parent=GCA000144955_01343_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02895
contig_1	Pyrodigal	gene	1418957	1419466	.	-	.	ID=GCA000144955_01344_gene;locus_tag=GCA000144955_01344;gene=rimL
contig_1	Pyrodigal	CDS	1418957	1419466	.	-	0	ID=GCA000144955_01344;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_01344;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000144955_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000620194.1,SO:0001217,UniParc:UPI00000D77C0,UniRef:UniRef100_Q2FYL4,UniRef:UniRef50_Q2FYL4,UniRef:UniRef90_Q2FYL4
contig_1	Pyrodigal	gene	1419867	1421357	.	-	.	ID=GCA000144955_01345_gene;locus_tag=GCA000144955_01345;gene=ctpA
contig_1	Pyrodigal	CDS	1419867	1421357	.	-	0	ID=GCA000144955_01345;Name=putative CtpA-like serine protease;locus_tag=GCA000144955_01345;product=putative CtpA-like serine protease;Dbxref=GO:0004175,GO:0005886,GO:0006508,GO:0007165,GO:0008236,GO:0030288;gene=ctpA;Parent=GCA000144955_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_000342147.1,SO:0001217,UniParc:UPI0001DD9A0B,UniRef:UniRef100_UPI0001DD9A0B,UniRef:UniRef50_Q4L6D0,UniRef:UniRef90_Q99U67;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1421539	1421760	.	-	.	ID=GCA000144955_01346_gene;locus_tag=GCA000144955_01346;gene=yozE
contig_1	Pyrodigal	CDS	1421539	1421760	.	-	0	ID=GCA000144955_01346;Name=UPF0346 protein SaurJH9_1481;locus_tag=GCA000144955_01346;product=UPF0346 protein SaurJH9_1481;gene=yozE;Parent=GCA000144955_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4479,COG:S,RefSeq:WP_000801007.1,SO:0001217,UniParc:UPI0000054A60,UniRef:UniRef100_Q2FYL1,UniRef:UniRef50_Q2FYL1,UniRef:UniRef90_Q2FYL1
contig_1	Pyrodigal	gene	1421760	1422260	.	-	.	ID=GCA000144955_01347_gene;locus_tag=GCA000144955_01347;gene=crr
contig_1	Pyrodigal	CDS	1421760	1422260	.	-	0	ID=GCA000144955_01347;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000144955_01347;product=PTS system glucose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0046872;gene=crr;Parent=GCA000144955_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_000473654.1,SO:0001217,UniParc:UPI00003B1687,UniRef:UniRef100_Q6GGY5,UniRef:UniRef50_Q81JY0,UniRef:UniRef90_P60856
contig_1	Pyrodigal	gene	1422272	1422700	.	-	.	ID=GCA000144955_01348_gene;locus_tag=GCA000144955_01348;gene=msrB
contig_1	Pyrodigal	CDS	1422272	1422700	.	-	0	ID=GCA000144955_01348;Name=Peptide methionine sulfoxide reductase MsrB;locus_tag=GCA000144955_01348;product=Peptide methionine sulfoxide reductase MsrB;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0033743;gene=msrB;Parent=GCA000144955_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,RefSeq:WP_000913315.1,SO:0001217,UniParc:UPI0000054A5E,UniRef:UniRef100_P0A088,UniRef:UniRef50_P0A088,UniRef:UniRef90_P0A088;ec_number=1.8.4.12
contig_1	Pyrodigal	gene	1422693	1423226	.	-	.	ID=GCA000144955_01349_gene;locus_tag=GCA000144955_01349;gene=msrA2
contig_1	Pyrodigal	CDS	1422693	1423226	.	-	0	ID=GCA000144955_01349;Name=Peptide methionine sulfoxide reductase MsrA 2;locus_tag=GCA000144955_01349;product=Peptide methionine sulfoxide reductase MsrA 2;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA2;Parent=GCA000144955_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159902.1,SO:0001217,UniParc:UPI0000054A5D,UniRef:UniRef100_P0A086,UniRef:UniRef50_P0A086,UniRef:UniRef90_P0A086;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1423312	1424151	.	-	.	ID=GCA000144955_01350_gene;locus_tag=GCA000144955_01350;gene=fakB2
contig_1	Pyrodigal	CDS	1423312	1424151	.	-	0	ID=GCA000144955_01350;Name=fatty acid kinase binding subunit FakB2;locus_tag=GCA000144955_01350;product=fatty acid kinase binding subunit FakB2;Dbxref=GO:0008289;gene=fakB2;Parent=GCA000144955_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166059,COG:COG1307,COG:I,RefSeq:WP_000166064.1,SO:0001217,UniParc:UPI0001DD9A0C,UniRef:UniRef100_UPI0001DD9A0C,UniRef:UniRef50_Q8NWR0,UniRef:UniRef90_Q8NWR0
contig_1	Pyrodigal	gene	1424166	1424645	.	-	.	ID=GCA000144955_01351_gene;locus_tag=GCA000144955_01351;gene=folA
contig_1	Pyrodigal	CDS	1424166	1424645	.	-	0	ID=GCA000144955_01351;Name=Dihydrofolate reductase;locus_tag=GCA000144955_01351;product=Dihydrofolate reductase;Dbxref=GO:0004146,GO:0005829,GO:0006730,GO:0046452,GO:0046654,GO:0046655,GO:0050661;gene=folA;Parent=GCA000144955_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,RefSeq:WP_000175746.1,SO:0001217,UniParc:UPI0000054A5B,UniRef:UniRef100_Q5HFZ7,UniRef:UniRef50_Q5HFZ7,UniRef:UniRef90_Q5HFZ7;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	1424834	1425790	.	-	.	ID=GCA000144955_01352_gene;locus_tag=GCA000144955_01352;gene=thyA
contig_1	Pyrodigal	CDS	1424834	1425790	.	-	0	ID=GCA000144955_01352;Name=thymidylate synthase;locus_tag=GCA000144955_01352;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259;gene=thyA;Parent=GCA000144955_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_000934890.1,SO:0001217,UniParc:UPI0001DD9A0D,UniRef:UniRef100_UPI0001DD9A0D,UniRef:UniRef50_P00469,UniRef:UniRef90_P67046;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	1426210	1426647	.	-	.	ID=GCA000144955_01353_gene;locus_tag=GCA000144955_01353
contig_1	Pyrodigal	CDS	1426210	1426647	.	-	0	ID=GCA000144955_01353;Name=Bacilliredoxin SAV1428;locus_tag=GCA000144955_01353;product=Bacilliredoxin SAV1428;Dbxref=GO:0045454;Parent=GCA000144955_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000995280.1,SO:0001217,UniParc:UPI0001DA2095,UniRef:UniRef100_UPI0001DA2095,UniRef:UniRef50_Q2FYK4,UniRef:UniRef90_Q2FYK4
contig_1	Pyrodigal	gene	1426663	1427787	.	-	.	ID=GCA000144955_01354_gene;locus_tag=GCA000144955_01354;gene=cvfC
contig_1	Pyrodigal	CDS	1426663	1427787	.	-	0	ID=GCA000144955_01354;Name=Conserved virulence factor C;locus_tag=GCA000144955_01354;product=Conserved virulence factor C;Dbxref=GO:0016491;gene=cvfC;Parent=GCA000144955_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000404636.1,SO:0001217,UniParc:UPI0001DD9A0E,UniRef:UniRef100_UPI0001DD9A0E,UniRef:UniRef50_Q2FYK3,UniRef:UniRef90_Q2FH09
contig_1	Pyrodigal	gene	1427825	1428076	.	-	.	ID=GCA000144955_01355_gene;locus_tag=GCA000144955_01355
contig_1	Pyrodigal	CDS	1427825	1428076	.	-	0	ID=GCA000144955_01355;Name=PBS lyase HEAT-like repeat protein;locus_tag=GCA000144955_01355;product=PBS lyase HEAT-like repeat protein;Parent=GCA000144955_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165814.1,SO:0001217,UniParc:UPI00003B168D,UniRef:UniRef100_A0A7Z7QZ83,UniRef:UniRef50_A0A0U1E823,UniRef:UniRef90_A0A077UK56
contig_1	Pyrodigal	gene	1428527	1429231	.	+	.	ID=GCA000144955_01356_gene;locus_tag=GCA000144955_01356;gene=yhhQ
contig_1	Pyrodigal	CDS	1428527	1429231	.	+	0	ID=GCA000144955_01356;Name=queuosine precursor transporter;locus_tag=GCA000144955_01356;product=queuosine precursor transporter;Dbxref=GO:1990397;gene=yhhQ;Parent=GCA000144955_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,RefSeq:WP_000282174.1,SO:0001217,UniParc:UPI0001DD9B98,UniRef:UniRef100_UPI0001DD9B98,UniRef:UniRef50_A0A380CFB3,UniRef:UniRef90_A0A0U1MKY9
contig_1	Pyrodigal	gene	1429467	1429868	.	+	.	ID=GCA000144955_01357_gene;locus_tag=GCA000144955_01357;gene=rnhA
contig_1	Pyrodigal	CDS	1429467	1429868	.	+	0	ID=GCA000144955_01357;Name=RNase H type-1 domain-containing protein;locus_tag=GCA000144955_01357;product=RNase H type-1 domain-containing protein;gene=rnhA;Parent=GCA000144955_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,RefSeq:WP_001062942.1,SO:0001217,UniParc:UPI0001DD9B99,UniRef:UniRef100_UPI0001DD9B99,UniRef:UniRef50_Q2FYJ7,UniRef:UniRef90_Q2FYJ7
contig_1	Pyrodigal	gene	1429927	1461804	.	-	.	ID=GCA000144955_01358_gene;locus_tag=GCA000144955_01358
contig_1	Pyrodigal	CDS	1429927	1461804	.	-	0	ID=GCA000144955_01358;Name=Extracellular matrix-binding protein ebh;locus_tag=GCA000144955_01358;product=Extracellular matrix-binding protein ebh;Parent=GCA000144955_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_258091373.1,SO:0001217,UniParc:UPI001B04DD06,UniRef:UniRef100_UPI001B04DD06,UniRef:UniRef50_Q2FYJ6,UniRef:UniRef90_A0A0U1MKX2
contig_1	Pyrodigal	gene	1462202	1463593	.	-	.	ID=GCA000144955_01359_gene;locus_tag=GCA000144955_01359;gene=norB
contig_1	Pyrodigal	CDS	1462202	1463593	.	-	0	ID=GCA000144955_01359;Name=multidrug efflux MFS transporter NorB;locus_tag=GCA000144955_01359;product=multidrug efflux MFS transporter NorB;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=norB;Parent=GCA000144955_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000414682,COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000414692.1,SO:0001217,UniParc:UPI0001DD9B9A,UniRef:UniRef100_UPI0001DD9B9A,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q2FYJ5
contig_1	Pyrodigal	gene	1463749	1465071	.	-	.	ID=GCA000144955_01360_gene;locus_tag=GCA000144955_01360;gene=potE
contig_1	Pyrodigal	CDS	1463749	1465071	.	-	0	ID=GCA000144955_01360;Name=Amino acid permease;locus_tag=GCA000144955_01360;product=Amino acid permease;gene=potE;Parent=GCA000144955_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000064770.1,SO:0001217,UniParc:UPI0001DD9B9B,UniRef:UniRef100_UPI0001DD9B9B,UniRef:UniRef50_Q2FYJ4,UniRef:UniRef90_Q2FYJ4
contig_1	Pyrodigal	gene	1465102	1466142	.	-	.	ID=GCA000144955_01361_gene;locus_tag=GCA000144955_01361;gene=tdcB
contig_1	Pyrodigal	CDS	1465102	1466142	.	-	0	ID=GCA000144955_01361;Name=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;locus_tag=GCA000144955_01361;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;Dbxref=GO:0000166,GO:0003941,GO:0004794,GO:0006565,GO:0006567,GO:0009097,GO:0030170,GO:0070689;gene=tdcB;Parent=GCA000144955_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000210818.1,SO:0001217,UniParc:UPI0001DD9B9C,UniRef:UniRef100_UPI0001DD9B9C,UniRef:UniRef50_P0AGF6,UniRef:UniRef90_Q2FYJ3;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	1466236	1467354	.	-	.	ID=GCA000144955_01362_gene;locus_tag=GCA000144955_01362;gene=ald
contig_1	Pyrodigal	CDS	1466236	1467354	.	-	0	ID=GCA000144955_01362;Name=alanine dehydrogenase;locus_tag=GCA000144955_01362;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000144955_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000959442.1,SO:0001217,UniParc:UPI0001DD9B9D,UniRef:UniRef100_UPI0001DD9B9D,UniRef:UniRef50_Q2FYJ2,UniRef:UniRef90_Q2FYJ2;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1467830	1468708	.	-	.	ID=GCA000144955_01363_gene;locus_tag=GCA000144955_01363;gene=exoIX
contig_1	Pyrodigal	CDS	1467830	1468708	.	-	0	ID=GCA000144955_01363;Name=5'-3' exonuclease;locus_tag=GCA000144955_01363;product=5'-3' exonuclease;gene=exoIX;Parent=GCA000144955_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0258,COG:L,RefSeq:WP_001133021.1,SO:0001217,UniParc:UPI00000CAC0A,UniRef:UniRef100_A0A7Z7QYY6,UniRef:UniRef50_A0A380G7N4,UniRef:UniRef90_A0A641AB36
contig_1	Pyrodigal	gene	1468728	1472168	.	-	.	ID=GCA000144955_01364_gene;locus_tag=GCA000144955_01364;gene=era
contig_1	Pyrodigal	CDS	1468728	1472168	.	-	0	ID=GCA000144955_01364;Name=Dynamin N-terminal domain-containing protein;locus_tag=GCA000144955_01364;product=Dynamin N-terminal domain-containing protein;gene=era;Parent=GCA000144955_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000608485.1,SO:0001217,UniParc:UPI0001DD9B9E,UniRef:UniRef100_UPI0001DD9B9E,UniRef:UniRef50_K9B117,UniRef:UniRef90_Q2FYJ0
contig_1	Pyrodigal	gene	1472472	1473812	.	+	.	ID=GCA000144955_01365_gene;locus_tag=GCA000144955_01365;gene=piuB
contig_1	Pyrodigal	CDS	1472472	1473812	.	+	0	ID=GCA000144955_01365;Name=PepSY domain-containing protein;locus_tag=GCA000144955_01365;product=PepSY domain-containing protein;gene=piuB;Parent=GCA000144955_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3182,COG:P,RefSeq:WP_000798976.1,SO:0001217,UniParc:UPI0001DD9B9F,UniRef:UniRef100_UPI0001DD9B9F,UniRef:UniRef50_Q2FYI9,UniRef:UniRef90_Q2FYI9
contig_1	Pyrodigal	gene	1473971	1474303	.	-	.	ID=GCA000144955_01366_gene;locus_tag=GCA000144955_01366
contig_1	Pyrodigal	CDS	1473971	1474303	.	-	0	ID=GCA000144955_01366;Name=DUF4889 domain-containing protein;locus_tag=GCA000144955_01366;product=DUF4889 domain-containing protein;Parent=GCA000144955_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000516800.1,SO:0001217,UniParc:UPI0000054A43,UniRef:UniRef100_Q2FYI7,UniRef:UniRef50_Q2FYI7,UniRef:UniRef90_Q2FYI7
contig_1	Pyrodigal	gene	1474387	1475532	.	-	.	ID=GCA000144955_01367_gene;locus_tag=GCA000144955_01367;gene=rlmL
contig_1	Pyrodigal	CDS	1474387	1475532	.	-	0	ID=GCA000144955_01367;Name=THUMP domain-containing protein;locus_tag=GCA000144955_01367;product=THUMP domain-containing protein;gene=rlmL;Parent=GCA000144955_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0116,COG:J,RefSeq:WP_000487148.1,SO:0001217,UniParc:UPI0001DD9BA0,UniRef:UniRef100_UPI0001DD9BA0,UniRef:UniRef50_P50840,UniRef:UniRef90_Q2FYI6
contig_1	Infernal	gene	1475741	1476119	.	-	.	ID=GCA000144955_01368_gene;locus_tag=GCA000144955_01368;gene=RNaseP_bact_b
contig_1	Infernal	ncRNA	1475741	1476119	3.2e-35	-	.	ID=GCA000144955_01368;Name=Bacterial RNase P class B;locus_tag=GCA000144955_01368;product=Bacterial RNase P class B;Dbxref=RFAM:RF00011;Parent=GCA000144955_01368_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00011
contig_1	Pyrodigal	gene	1475971	1476081	.	-	.	ID=GCA000144955_01369_gene;locus_tag=GCA000144955_01369
contig_1	Pyrodigal	CDS	1475971	1476081	.	-	0	ID=GCA000144955_01369;Name=hypothetical protein;locus_tag=GCA000144955_01369;product=hypothetical protein;Parent=GCA000144955_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DD9BA1,UniRef:UniRef100_A0A7U7PY85,UniRef:UniRef50_A0A0M5N980,UniRef:UniRef90_A0A7U7PY85
contig_1	Pyrodigal	gene	1476182	1476526	.	-	.	ID=GCA000144955_01370_gene;locus_tag=GCA000144955_01370;gene=gpsB
contig_1	Pyrodigal	CDS	1476182	1476526	.	-	0	ID=GCA000144955_01370;Name=cell division regulator GpsB;locus_tag=GCA000144955_01370;product=cell division regulator GpsB;Dbxref=GO:0005737,GO:0008360,GO:0051301;gene=gpsB;Parent=GCA000144955_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001286318.1,SO:0001217,UniParc:UPI0001DD9BA2,UniRef:UniRef100_A0A7U7PYF6,UniRef:UniRef50_Q2FYI5,UniRef:UniRef90_Q2FYI5
contig_1	Pyrodigal	gene	1476540	1477103	.	-	.	ID=GCA000144955_01371_gene;locus_tag=GCA000144955_01371;gene=yoqJ
contig_1	Pyrodigal	CDS	1476540	1477103	.	-	0	ID=GCA000144955_01371;Name=UPF0398 protein SaurJH1_1535;locus_tag=GCA000144955_01371;product=UPF0398 protein SaurJH1_1535;gene=yoqJ;Parent=GCA000144955_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4474,COG:X,RefSeq:WP_000241304.1,SO:0001217,UniParc:UPI0001DD9BA3,UniRef:UniRef100_UPI0001DD9BA3,UniRef:UniRef50_Q2FYI4,UniRef:UniRef90_Q2FYI4
contig_1	Pyrodigal	gene	1477096	1477497	.	-	.	ID=GCA000144955_01372_gene;locus_tag=GCA000144955_01372
contig_1	Pyrodigal	CDS	1477096	1477497	.	-	0	ID=GCA000144955_01372;Name=DUF1798 domain-containing protein;locus_tag=GCA000144955_01372;product=DUF1798 domain-containing protein;Parent=GCA000144955_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FYI3,UniRef:UniRef90_Q2FYI3
contig_1	Pyrodigal	gene	1477986	1478612	.	+	.	ID=GCA000144955_01373_gene;locus_tag=GCA000144955_01373;gene=recU
contig_1	Pyrodigal	CDS	1477986	1478612	.	+	0	ID=GCA000144955_01373;Name=Holliday junction resolvase RecU;locus_tag=GCA000144955_01373;product=Holliday junction resolvase RecU;Dbxref=GO:0000287,GO:0003676,GO:0004519,GO:0005737,GO:0006281,GO:0006310,GO:0007059;gene=recU;Parent=GCA000144955_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3331,COG:R,RefSeq:WP_001108887.1,SO:0001217,UniParc:UPI0001DD9BA5,UniRef:UniRef100_UPI0001DD9BA5,UniRef:UniRef50_Q8GN53,UniRef:UniRef90_Q8GN53;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1478609	1480792	.	+	.	ID=GCA000144955_01374_gene;locus_tag=GCA000144955_01374;gene=mrcB
contig_1	Pyrodigal	CDS	1478609	1480792	.	+	0	ID=GCA000144955_01374;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000144955_01374;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000144955_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,RefSeq:WP_000138353.1,SO:0001217,UniParc:UPI0001DD9BA6,UniRef:UniRef100_UPI0001DD9BA6,UniRef:UniRef50_F4NA87,UniRef:UniRef90_F4NA87
contig_1	Pyrodigal	gene	1481309	1481650	.	-	.	ID=GCA000144955_01375_gene;locus_tag=GCA000144955_01375
contig_1	Pyrodigal	CDS	1481309	1481650	.	-	0	ID=GCA000144955_01375;Name=YpoC-like domain-containing protein;locus_tag=GCA000144955_01375;product=YpoC-like domain-containing protein;Parent=GCA000144955_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182037.1,SO:0001217,UniParc:UPI0001DD9BA7,UniRef:UniRef100_UPI0001DD9BA7,UniRef:UniRef50_A0A143PAF6,UniRef:UniRef90_Q2FYH9
contig_1	Pyrodigal	gene	1481655	1482314	.	-	.	ID=GCA000144955_01376_gene;locus_tag=GCA000144955_01376;gene=nth
contig_1	Pyrodigal	CDS	1481655	1482314	.	-	0	ID=GCA000144955_01376;Name=endonuclease III;locus_tag=GCA000144955_01376;product=endonuclease III;Dbxref=GO:0006281,GO:0140078;gene=nth;Parent=GCA000144955_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_000253774.1,SO:0001217,UniParc:UPI0001DD9BA8,UniRef:UniRef100_UPI0001DD9BA8,UniRef:UniRef50_A0A024P153,UniRef:UniRef90_A0A7X9ZHC0;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1482304	1482990	.	-	.	ID=GCA000144955_01377_gene;locus_tag=GCA000144955_01377;gene=dnaD
contig_1	Pyrodigal	CDS	1482304	1482990	.	-	0	ID=GCA000144955_01377;Name=Chromosome replication initiation protein dnaD;locus_tag=GCA000144955_01377;product=Chromosome replication initiation protein dnaD;gene=dnaD;Parent=GCA000144955_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3935,COG:L,RefSeq:WP_000362218.1,SO:0001217,UniParc:UPI00000D78A7,UniRef:UniRef100_A0A2W2X8C3,UniRef:UniRef50_A0A2T4RL44,UniRef:UniRef90_A0A2W2X8C3
contig_1	Pyrodigal	gene	1483319	1484611	.	-	.	ID=GCA000144955_01378_gene;locus_tag=GCA000144955_01378;gene=asnS
contig_1	Pyrodigal	CDS	1483319	1484611	.	-	0	ID=GCA000144955_01378;Name=asparagine--tRNA ligase;locus_tag=GCA000144955_01378;product=asparagine--tRNA ligase;Dbxref=GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421,GO:0016740;gene=asnS;Parent=GCA000144955_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_000858789.1,SO:0001217,UniParc:UPI00004B5BF1,UniRef:UniRef100_Q2FYH6,UniRef:UniRef50_P54262,UniRef:UniRef90_Q2FYH6;ec_number=6.1.1.22
contig_1	Pyrodigal	gene	1484932	1487625	.	-	.	ID=GCA000144955_01379_gene;locus_tag=GCA000144955_01379;gene=dinG
contig_1	Pyrodigal	CDS	1484932	1487625	.	-	0	ID=GCA000144955_01379;Name=3'-5' exonuclease DinG;locus_tag=GCA000144955_01379;product=3'-5' exonuclease DinG;Dbxref=GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0005829,GO:0008408,GO:0016818,GO:0045004;gene=dinG;Parent=GCA000144955_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2176,COG:L,KEGG:K03722,RefSeq:WP_000525086.1,SO:0001217,UniParc:UPI0001DD9BA9,UniRef:UniRef100_UPI0001DD9BA9,UniRef:UniRef50_Q6GGV4,UniRef:UniRef90_Q6GGV4;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1487649	1488620	.	-	.	ID=GCA000144955_01380_gene;locus_tag=GCA000144955_01380;gene=birA
contig_1	Pyrodigal	CDS	1487649	1488620	.	-	0	ID=GCA000144955_01380;Name=Bifunctional ligase/repressor BirA;locus_tag=GCA000144955_01380;product=Bifunctional ligase/repressor BirA;gene=birA;Parent=GCA000144955_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1654,COG:K,KEGG:K03524,RefSeq:WP_000049916.1,SO:0001217,UniParc:UPI0001C0B8E5,UniRef:UniRef100_A0A2S6DAL2,UniRef:UniRef50_A0A2K4AIL1,UniRef:UniRef90_A0A2K4AIL1;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	1488607	1489809	.	-	.	ID=GCA000144955_01381_gene;locus_tag=GCA000144955_01381;gene=cca
contig_1	Pyrodigal	CDS	1488607	1489809	.	-	0	ID=GCA000144955_01381;Name=CCA tRNA nucleotidyltransferase;locus_tag=GCA000144955_01381;product=CCA tRNA nucleotidyltransferase;Dbxref=GO:0000049,GO:0000287,GO:0001680,GO:0005524,GO:0016779,GO:0042245,GO:0160016;gene=cca;Parent=GCA000144955_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,RefSeq:WP_000361550.1,SO:0001217,UniParc:UPI0001DD9BAA,UniRef:UniRef100_UPI0001DD9BAA,UniRef:UniRef50_Q49XR3,UniRef:UniRef90_Q99U32;ec_number=2.7.7.72
contig_1	Pyrodigal	gene	1489814	1490956	.	-	.	ID=GCA000144955_01382_gene;locus_tag=GCA000144955_01382;gene=bshA
contig_1	Pyrodigal	CDS	1489814	1490956	.	-	0	ID=GCA000144955_01382;Name=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;locus_tag=GCA000144955_01382;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;Dbxref=GO:0016757,GO:0071793;gene=bshA;Parent=GCA000144955_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000690030.1,SO:0001217,UniParc:UPI0001DD9BAB,UniRef:UniRef100_UPI0001DD9BAB,UniRef:UniRef50_P42982,UniRef:UniRef90_Q2G255
contig_1	Pyrodigal	gene	1491211	1491528	.	-	.	ID=GCA000144955_01383_gene;locus_tag=GCA000144955_01383;gene=mazG
contig_1	Pyrodigal	CDS	1491211	1491528	.	-	0	ID=GCA000144955_01383;Name=NTP pyrophosphohydrolase MazG-like domain-containing protein;locus_tag=GCA000144955_01383;product=NTP pyrophosphohydrolase MazG-like domain-containing protein;gene=mazG;Parent=GCA000144955_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1694,COG:V,RefSeq:WP_000839926.1,SO:0001217,UniParc:UPI0000054C60,UniRef:UniRef100_Q2G254,UniRef:UniRef50_K8ZP05,UniRef:UniRef90_Q2G254
contig_1	Pyrodigal	gene	1491864	1492562	.	-	.	ID=GCA000144955_01384_gene;locus_tag=GCA000144955_01384;gene=yugP
contig_1	Pyrodigal	CDS	1491864	1492562	.	-	0	ID=GCA000144955_01384;Name=Putative membrane protease YugP;locus_tag=GCA000144955_01384;product=Putative membrane protease YugP;gene=yugP;Parent=GCA000144955_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2738,COG:O,KEGG:K06973,SO:0001217,UniParc:UPI00000CAC92,UniRef:UniRef100_A0A7Z7W209,UniRef:UniRef50_A0A7U7PY90,UniRef:UniRef90_A0A7U7PY90
contig_1	Pyrodigal	gene	1492616	1493203	.	-	.	ID=GCA000144955_01385_gene;locus_tag=GCA000144955_01385;gene=ypjA
contig_1	Pyrodigal	CDS	1492616	1493203	.	-	0	ID=GCA000144955_01385;Name=DUF1405 domain-containing protein;locus_tag=GCA000144955_01385;product=DUF1405 domain-containing protein;gene=ypjA;Parent=GCA000144955_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4347,COG:S,RefSeq:WP_000154690.1,SO:0001217,UniParc:UPI0001DD9BAC,UniRef:UniRef100_UPI0001DD9BAC,UniRef:UniRef50_Q2FYH4,UniRef:UniRef90_Q2FYH4
contig_1	Pyrodigal	gene	1493193	1493822	.	-	.	ID=GCA000144955_01386_gene;locus_tag=GCA000144955_01386;gene=ypiB
contig_1	Pyrodigal	CDS	1493193	1493822	.	-	0	ID=GCA000144955_01386;Name=UPF0302 protein SA1295;locus_tag=GCA000144955_01386;product=UPF0302 protein SA1295;gene=ypiB;Parent=GCA000144955_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5582,COG:S,SO:0001217,UniRef:UniRef50_Q2FYH3,UniRef:UniRef90_Q2FYH3
contig_1	Pyrodigal	gene	1493782	1495026	.	-	.	ID=GCA000144955_01387_gene;locus_tag=GCA000144955_01387;gene=tadD
contig_1	Pyrodigal	CDS	1493782	1495026	.	-	0	ID=GCA000144955_01387;Name=Tetratricopeptide repeat protein;locus_tag=GCA000144955_01387;product=Tetratricopeptide repeat protein;gene=tadD;Parent=GCA000144955_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5010,COG:W,RefSeq:WP_000389523.1,SO:0001217,UniParc:UPI0001DD9BAE,UniRef:UniRef100_UPI0001DD9BAE,UniRef:UniRef50_Q49XR9,UniRef:UniRef90_A0AA40JLE9
contig_1	Pyrodigal	gene	1495033	1496331	.	-	.	ID=GCA000144955_01388_gene;locus_tag=GCA000144955_01388;gene=aroA
contig_1	Pyrodigal	CDS	1495033	1496331	.	-	0	ID=GCA000144955_01388;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000144955_01388;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000144955_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_000245905.1,SO:0001217,UniParc:UPI00005FE4EF,UniRef:UniRef100_Q2YY90,UniRef:UniRef50_Q05615,UniRef:UniRef90_Q05615;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	1496341	1497405	.	-	.	ID=GCA000144955_01389_gene;locus_tag=GCA000144955_01389;gene=aroB
contig_1	Pyrodigal	CDS	1496341	1497405	.	-	0	ID=GCA000144955_01389;Name=3-dehydroquinate synthase;locus_tag=GCA000144955_01389;product=3-dehydroquinate synthase;Dbxref=GO:0003856,GO:0005737,GO:0009073,GO:0009423;gene=aroB;Parent=GCA000144955_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01735,RefSeq:WP_000776331.1,SO:0001217,UniParc:UPI0001DD9BAF,UniRef:UniRef100_UPI0001DD9BAF,UniRef:UniRef50_Q6GGU4,UniRef:UniRef90_A0A6B1RPZ4;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	1497431	1498597	.	-	.	ID=GCA000144955_01390_gene;locus_tag=GCA000144955_01390;gene=aroC
contig_1	Pyrodigal	CDS	1497431	1498597	.	-	0	ID=GCA000144955_01390;Name=chorismate synthase;locus_tag=GCA000144955_01390;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA000144955_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_001269924.1,SO:0001217,UniParc:UPI0001DD9BB0,UniRef:UniRef100_UPI0001DD9BB0,UniRef:UniRef50_Q59803,UniRef:UniRef90_Q59803;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	1498987	1499187	.	-	.	ID=GCA000144955_01391_gene;locus_tag=GCA000144955_01391
contig_1	Pyrodigal	CDS	1498987	1499187	.	-	0	ID=GCA000144955_01391;Name=hypothetical protein;locus_tag=GCA000144955_01391;product=hypothetical protein;Parent=GCA000144955_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000789526.1,SO:0001217,UniParc:UPI0001DD9BB1,UniRef:UniRef100_UPI0001DD9BB1,UniRef:UniRef50_Q2FYG8,UniRef:UniRef90_Q2FYG8
contig_1	Pyrodigal	gene	1499394	1499843	.	-	.	ID=GCA000144955_01392_gene;locus_tag=GCA000144955_01392;gene=ndk
contig_1	Pyrodigal	CDS	1499394	1499843	.	-	0	ID=GCA000144955_01392;Name=nucleoside-diphosphate kinase;locus_tag=GCA000144955_01392;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550,GO:0005524,GO:0005737,GO:0006183,GO:0006228,GO:0006241,GO:0046872;gene=ndk;Parent=GCA000144955_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_000442476.1,SO:0001217,UniParc:UPI0001DD9BB2,UniRef:UniRef100_UPI0001DD9BB2,UniRef:UniRef50_Q2FYG7,UniRef:UniRef90_Q2FYG7;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	1499935	1500894	.	-	.	ID=GCA000144955_01393_gene;locus_tag=GCA000144955_01393;gene=ispA
contig_1	Pyrodigal	CDS	1499935	1500894	.	-	0	ID=GCA000144955_01393;Name=Farnesyl pyrophosphate synthetase;locus_tag=GCA000144955_01393;product=Farnesyl pyrophosphate synthetase;gene=ispA;Parent=GCA000144955_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,KEGG:K24873,RefSeq:WP_001096479.1,SO:0001217,UniParc:UPI0001C11E74,UniRef:UniRef100_A0A0D1HIQ5,UniRef:UniRef50_A0A0D6HKK2,UniRef:UniRef90_A0A0D6HKK2;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1500896	1501621	.	-	.	ID=GCA000144955_01394_gene;locus_tag=GCA000144955_01394;gene=menG
contig_1	Pyrodigal	CDS	1500896	1501621	.	-	0	ID=GCA000144955_01394;Name=demethylmenaquinone methyltransferase;locus_tag=GCA000144955_01394;product=demethylmenaquinone methyltransferase;Dbxref=GO:0008168,GO:0009234,GO:0032259,GO:0043770;gene=menG;Parent=GCA000144955_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000774684.1,SO:0001217,UniParc:UPI0000054C6C,UniRef:UniRef100_Q5HFV2,UniRef:UniRef50_P31113,UniRef:UniRef90_Q6GGU0;ec_number=2.1.1.163
contig_1	Pyrodigal	gene	1501624	1502196	.	-	.	ID=GCA000144955_01395_gene;locus_tag=GCA000144955_01395
contig_1	Pyrodigal	CDS	1501624	1502196	.	-	0	ID=GCA000144955_01395;Name=Heptaprenyl pyrophosphate synthase subunit A;locus_tag=GCA000144955_01395;product=Heptaprenyl pyrophosphate synthase subunit A;Parent=GCA000144955_01395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00805,RefSeq:WP_000450561.1,SO:0001217,UniParc:UPI0001DD9D68,UniRef:UniRef100_UPI0001DD9D68,UniRef:UniRef50_Q2FYG4,UniRef:UniRef90_Q2FYG4;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1502627	1502899	.	-	.	ID=GCA000144955_01396_gene;locus_tag=GCA000144955_01396;gene=hup
contig_1	Pyrodigal	CDS	1502627	1502899	.	-	0	ID=GCA000144955_01396;Name=DNA-binding protein HU;locus_tag=GCA000144955_01396;product=DNA-binding protein HU;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hup;Parent=GCA000144955_01396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_001043863.1,SO:0001217,UniParc:UPI0000054C6E,UniRef:UniRef100_Q5HFV0,UniRef:UniRef50_P0A3H3,UniRef:UniRef90_Q5HFV0
contig_1	Pyrodigal	gene	1503070	1504068	.	-	.	ID=GCA000144955_01397_gene;locus_tag=GCA000144955_01397;gene=gpsA
contig_1	Pyrodigal	CDS	1503070	1504068	.	-	0	ID=GCA000144955_01397;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000144955_01397;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006650,GO:0008654,GO:0009331,GO:0046167,GO:0046168,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000144955_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_000161747.1,SO:0001217,UniParc:UPI0001DD9D69,UniRef:UniRef100_UPI0001DD9D69,UniRef:UniRef50_Q5XE03,UniRef:UniRef90_Q2FYG1;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	1504085	1505395	.	-	.	ID=GCA000144955_01398_gene;locus_tag=GCA000144955_01398;gene=der
contig_1	Pyrodigal	CDS	1504085	1505395	.	-	0	ID=GCA000144955_01398;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000144955_01398;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=der;Parent=GCA000144955_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,KEGG:K03977,RefSeq:WP_000165531.1,SO:0001217,UniParc:UPI0001DD9D6A,UniRef:UniRef100_UPI0001DD9D6A,UniRef:UniRef50_P50743,UniRef:UniRef90_Q2FYG0;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1505618	1506793	.	-	.	ID=GCA000144955_01399_gene;locus_tag=GCA000144955_01399;gene=rpsA
contig_1	Pyrodigal	CDS	1505618	1506793	.	-	0	ID=GCA000144955_01399;Name=30S ribosomal protein S1;locus_tag=GCA000144955_01399;product=30S ribosomal protein S1;Dbxref=GO:0003676,GO:0003729,GO:0003735,GO:0006412,GO:0022627;gene=rpsA;Parent=GCA000144955_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_000133955.1,SO:0001217,UniParc:UPI0001C0B8F4,UniRef:UniRef100_A0A0D1H9E6,UniRef:UniRef50_Q49XT0,UniRef:UniRef90_Q6GGT5
contig_1	Pyrodigal	gene	1507504	1508163	.	-	.	ID=GCA000144955_01400_gene;locus_tag=GCA000144955_01400;gene=cmk
contig_1	Pyrodigal	CDS	1507504	1508163	.	-	0	ID=GCA000144955_01400;Name=(d)CMP kinase;locus_tag=GCA000144955_01400;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000144955_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,RefSeq:WP_000991528.1,SO:0001217,UniParc:UPI0001DD9D6B,UniRef:UniRef100_UPI0001DD9D6B,UniRef:UniRef50_B9DNU7,UniRef:UniRef90_Q6GGT4;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	1508240	1509208	.	+	.	ID=GCA000144955_01401_gene;locus_tag=GCA000144955_01401;gene=ansA
contig_1	Pyrodigal	CDS	1508240	1509208	.	+	0	ID=GCA000144955_01401;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000144955_01401;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=ansA;Parent=GCA000144955_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_000681762.1,SO:0001217,UniParc:UPI0001DD9D6C,UniRef:UniRef100_UPI0001DD9D6C,UniRef:UniRef50_K8E262,UniRef:UniRef90_A0A391A6D3
contig_1	Pyrodigal	gene	1509323	1510309	.	-	.	ID=GCA000144955_01402_gene;locus_tag=GCA000144955_01402;gene=trxB
contig_1	Pyrodigal	CDS	1509323	1510309	.	-	0	ID=GCA000144955_01402;Name=FAD-binding protein;locus_tag=GCA000144955_01402;product=FAD-binding protein;gene=trxB;Parent=GCA000144955_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K26960,RefSeq:WP_001174263.1,SO:0001217,UniParc:UPI0001DD9D6D,UniRef:UniRef100_UPI0001DD9D6D,UniRef:UniRef50_A0A380G2E5,UniRef:UniRef90_A0A2K4AII5;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	1510711	1512171	.	-	.	ID=GCA000144955_01403_gene;locus_tag=GCA000144955_01403;gene=ebpS
contig_1	Pyrodigal	CDS	1510711	1512171	.	-	0	ID=GCA000144955_01403;Name=elastin-binding protein EbpS;locus_tag=GCA000144955_01403;product=elastin-binding protein EbpS;Dbxref=GO:0005886;gene=ebpS;Parent=GCA000144955_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000069297.1,SO:0001217,UniParc:UPI0001DD9D6E,UniRef:UniRef100_UPI0001DD9D6E,UniRef:UniRef50_Q2FYF1,UniRef:UniRef90_Q2FYF1
contig_1	Pyrodigal	gene	1512324	1513703	.	-	.	ID=GCA000144955_01404_gene;locus_tag=GCA000144955_01404;gene=recQ
contig_1	Pyrodigal	CDS	1512324	1513703	.	-	0	ID=GCA000144955_01404;Name=ATP-dependent DNA helicase;locus_tag=GCA000144955_01404;product=ATP-dependent DNA helicase;gene=recQ;Parent=GCA000144955_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000902121.1,SO:0001217,UniParc:UPI0001DD9D6F,UniRef:UniRef100_UPI0001DD9D6F,UniRef:UniRef50_A0A380G6G1,UniRef:UniRef90_A0A390B2J9
contig_1	Pyrodigal	gene	1513693	1514646	.	-	.	ID=GCA000144955_01405_gene;locus_tag=GCA000144955_01405;gene=ypbB
contig_1	Pyrodigal	CDS	1513693	1514646	.	-	0	ID=GCA000144955_01405;Name=Helicase Helix-turn-helix domain-containing protein;locus_tag=GCA000144955_01405;product=Helicase Helix-turn-helix domain-containing protein;gene=ypbB;Parent=GCA000144955_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4955,COG:S,RefSeq:WP_001163804.1,SO:0001217,UniParc:UPI0001DD9D70,UniRef:UniRef100_UPI0001DD9D70,UniRef:UniRef50_Q2FYE9,UniRef:UniRef90_Q2FYE9
contig_1	Pyrodigal	gene	1514754	1515002	.	+	.	ID=GCA000144955_01406_gene;locus_tag=GCA000144955_01406;gene=fer
contig_1	Pyrodigal	CDS	1514754	1515002	.	+	0	ID=GCA000144955_01406;Name=Ferredoxin;locus_tag=GCA000144955_01406;product=Ferredoxin;gene=fer;Parent=GCA000144955_01406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1141,RefSeq:WP_001151997.1,SO:0001217,UniParc:UPI00000D7814,UniRef:UniRef100_A0A7Z7QYV2,UniRef:UniRef50_P50727,UniRef:UniRef90_D3G002
contig_1	Pyrodigal	gene	1515108	1515653	.	-	.	ID=GCA000144955_01407_gene;locus_tag=GCA000144955_01407;gene=ribU
contig_1	Pyrodigal	CDS	1515108	1515653	.	-	0	ID=GCA000144955_01407;Name=Riboflavin transporter RibU;locus_tag=GCA000144955_01407;product=Riboflavin transporter RibU;Dbxref=GO:0005886,GO:0032217;gene=ribU;Parent=GCA000144955_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3601,COG:H,KEGG:K23675,RefSeq:WP_001186903.1,SO:0001217,UniParc:UPI0001DD9D71,UniRef:UniRef100_UPI0001DD9D71,UniRef:UniRef50_E5QVT2,UniRef:UniRef90_E5QVT2
contig_1	Infernal	regulatory_region	1515715	1515849	2.1e-20	-	.	ID=BPGLLONNDN_159;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1516260	1517126	.	-	.	ID=GCA000144955_01408_gene;locus_tag=GCA000144955_01408
contig_1	Pyrodigal	CDS	1516260	1517126	.	-	0	ID=GCA000144955_01408;Name=DUF1672 domain-containing protein;locus_tag=GCA000144955_01408;product=DUF1672 domain-containing protein;Parent=GCA000144955_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3JSF1
contig_1	Pyrodigal	gene	1517375	1517581	.	-	.	ID=GCA000144955_01409_gene;locus_tag=GCA000144955_01409
contig_1	Pyrodigal	CDS	1517375	1517581	.	-	0	ID=GCA000144955_01409;Name=Lipoprotein;locus_tag=GCA000144955_01409;product=Lipoprotein;Parent=GCA000144955_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2W3JI51,UniRef:UniRef90_A0A2W3JI51
contig_1	Pyrodigal	gene	1517657	1518553	.	-	.	ID=GCA000144955_01410_gene;locus_tag=GCA000144955_01410
contig_1	Pyrodigal	CDS	1517657	1518553	.	-	0	ID=GCA000144955_01410;Name=Lipoprotein;locus_tag=GCA000144955_01410;product=Lipoprotein;Parent=GCA000144955_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000913242.1,SO:0001217,UniParc:UPI0001DD9D73,UniRef:UniRef100_UPI0001DD9D73,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_A0A7U7PYB6
contig_1	Pyrodigal	gene	1518644	1518829	.	-	.	ID=GCA000144955_01411_gene;locus_tag=GCA000144955_01411
contig_1	Pyrodigal	CDS	1518644	1518829	.	-	0	ID=GCA000144955_01411;Name=Lipoprotein;locus_tag=GCA000144955_01411;product=Lipoprotein;Parent=GCA000144955_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000470336.1,SO:0001217,UniParc:UPI00000D9E0E,UniRef:UniRef100_A0A7Z7QYW5,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0A0E1X540
contig_1	Pyrodigal	gene	1519078	1520055	.	-	.	ID=GCA000144955_01412_gene;locus_tag=GCA000144955_01412;gene=lukF-PV
contig_1	Pyrodigal	CDS	1519078	1520055	.	-	0	ID=GCA000144955_01412;Name=Panton-Valentine bi-component leukocidin subunit F;locus_tag=GCA000144955_01412;product=Panton-Valentine bi-component leukocidin subunit F;gene=lukF-PV;Parent=GCA000144955_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:BAA24008.1,SO:0001217,UniParc:UPI000009C32D,UniRef:UniRef100_A0A9X9K0A9,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q53747,VFDB:VFC0235,VFDB:VFG001276
contig_1	Pyrodigal	gene	1520057	1520995	.	-	.	ID=GCA000144955_01413_gene;locus_tag=GCA000144955_01413;gene=lukS-PV
contig_1	Pyrodigal	CDS	1520057	1520995	.	-	0	ID=GCA000144955_01413;Name=Panton-Valentine bi-component leukocidin subunit S;locus_tag=GCA000144955_01413;product=Panton-Valentine bi-component leukocidin subunit S;gene=lukS-PV;Parent=GCA000144955_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AGW33874.1,RefSeq:WP_000239545.1,SO:0001217,UniParc:UPI00000D9E0F,UniRef:UniRef100_A0A977TES7,UniRef:UniRef50_O54081,UniRef:UniRef90_A0FGS6,VFDB:VFC0235,VFDB:VFG001277
contig_1	Pyrodigal	gene	1521385	1522839	.	-	.	ID=GCA000144955_01414_gene;locus_tag=GCA000144955_01414
contig_1	Pyrodigal	CDS	1521385	1522839	.	-	0	ID=GCA000144955_01414;Name=putative autolysin PH;locus_tag=GCA000144955_01414;product=putative autolysin PH;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0031640,GO:0042742,GO:0043093,GO:0071555;Parent=GCA000144955_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01448,RefSeq:WP_000909220.1,SO:0001217,UniParc:UPI000009B886,UniRef:UniRef100_A0A977TEL1,UniRef:UniRef50_Q2FYD8,UniRef:UniRef90_Q2FYD8;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	1522850	1523152	.	-	.	ID=GCA000144955_01415_gene;locus_tag=GCA000144955_01415
contig_1	Pyrodigal	CDS	1522850	1523152	.	-	0	ID=GCA000144955_01415;Name=phage holin;locus_tag=GCA000144955_01415;product=phage holin;Dbxref=GO:0140911;Parent=GCA000144955_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000339146.1,SO:0001217,UniParc:UPI000009C019,UniRef:UniRef100_A0A977TEN7,UniRef:UniRef50_M1T2Y5,UniRef:UniRef90_M1T2Y5
contig_1	Pyrodigal	gene	1523288	1523587	.	-	.	ID=GCA000144955_01416_gene;locus_tag=GCA000144955_01416
contig_1	Pyrodigal	CDS	1523288	1523587	.	-	0	ID=GCA000144955_01416;Name=DUF2951 domain-containing protein;locus_tag=GCA000144955_01416;product=DUF2951 domain-containing protein;Parent=GCA000144955_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000466784.1,SO:0001217,UniParc:UPI000009BE83,UniRef:UniRef100_Q4ZCR9,UniRef:UniRef50_A0EWN0,UniRef:UniRef90_A0EWN0
contig_1	Pyrodigal	gene	1523633	1523797	.	-	.	ID=GCA000144955_01417_gene;locus_tag=GCA000144955_01417;gene=xkdX
contig_1	Pyrodigal	CDS	1523633	1523797	.	-	0	ID=GCA000144955_01417;Name=XkdX family protein;locus_tag=GCA000144955_01417;product=XkdX family protein;gene=xkdX;Parent=GCA000144955_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000916020.1,SO:0001217,UniParc:UPI00000541EC,UniRef:UniRef100_Q4ZCS0,UniRef:UniRef50_B2ZZ00,UniRef:UniRef90_M9QX31
contig_1	Pyrodigal	gene	1523790	1524179	.	-	.	ID=GCA000144955_01418_gene;locus_tag=GCA000144955_01418
contig_1	Pyrodigal	CDS	1523790	1524179	.	-	0	ID=GCA000144955_01418;Name=DUF2977 domain-containing protein;locus_tag=GCA000144955_01418;product=DUF2977 domain-containing protein;Parent=GCA000144955_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001166599.1,SO:0001217,UniParc:UPI00000541ED,UniRef:UniRef100_Q2FYD4,UniRef:UniRef50_A0A0K1LKC8,UniRef:UniRef90_A0A0K1LKC8
contig_1	Pyrodigal	gene	1524179	1525645	.	-	.	ID=GCA000144955_01419_gene;locus_tag=GCA000144955_01419;gene=bppU
contig_1	Pyrodigal	CDS	1524179	1525645	.	-	0	ID=GCA000144955_01419;Name=BppU N-terminal domain-containing protein;locus_tag=GCA000144955_01419;product=BppU N-terminal domain-containing protein;gene=bppU;Parent=GCA000144955_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000067127.1,SO:0001217,UniParc:UPI0000696C3D,UniRef:UniRef100_A0A977XQ24,UniRef:UniRef50_B5WZQ8,UniRef:UniRef90_B5WZQ8
contig_1	Pyrodigal	gene	1525645	1527555	.	-	.	ID=GCA000144955_01420_gene;locus_tag=GCA000144955_01420
contig_1	Pyrodigal	CDS	1525645	1527555	.	-	0	ID=GCA000144955_01420;Name=P68 RBP/TagC-like beta propeller domain-containing protein;locus_tag=GCA000144955_01420;product=P68 RBP/TagC-like beta propeller domain-containing protein;Parent=GCA000144955_01420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429558.1,SO:0001217,UniParc:UPI0000696C3E,UniRef:UniRef100_A0A977XRN8,UniRef:UniRef50_R4WAL5,UniRef:UniRef90_R4WAL5
contig_1	Pyrodigal	gene	1527571	1527861	.	-	.	ID=GCA000144955_01421_gene;locus_tag=GCA000144955_01421
contig_1	Pyrodigal	CDS	1527571	1527861	.	-	0	ID=GCA000144955_01421;Name=Phage protein;locus_tag=GCA000144955_01421;product=Phage protein;Parent=GCA000144955_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000179865.1,SO:0001217,UniParc:UPI0001DD9D74,UniRef:UniRef100_A0A9X9JV16,UniRef:UniRef50_R4WEC3,UniRef:UniRef90_R4WEC3
contig_1	Pyrodigal	gene	1527861	1529444	.	-	.	ID=GCA000144955_01422_gene;locus_tag=GCA000144955_01422
contig_1	Pyrodigal	CDS	1527861	1529444	.	-	0	ID=GCA000144955_01422;Name=Peptidase;locus_tag=GCA000144955_01422;product=Peptidase;Parent=GCA000144955_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384474.1,SO:0001217,UniParc:UPI00000D9E12,UniRef:UniRef100_M1SNW3,UniRef:UniRef50_M9QX27,UniRef:UniRef90_R4WCV5
contig_1	Pyrodigal	gene	1529453	1530277	.	-	.	ID=GCA000144955_01423_gene;locus_tag=GCA000144955_01423
contig_1	Pyrodigal	CDS	1529453	1530277	.	-	0	ID=GCA000144955_01423;Name=Siphovirus-type tail component RIFT-related domain-containing protein;locus_tag=GCA000144955_01423;product=Siphovirus-type tail component RIFT-related domain-containing protein;Parent=GCA000144955_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001190533.1,SO:0001217,UniParc:UPI00000541F2,UniRef:UniRef100_Q2FYC9,UniRef:UniRef50_R4WAV3,UniRef:UniRef90_R4WAV3
contig_1	Pyrodigal	gene	1530277	1536267	.	-	.	ID=GCA000144955_01424_gene;locus_tag=GCA000144955_01424
contig_1	Pyrodigal	CDS	1530277	1536267	.	-	0	ID=GCA000144955_01424;Name=lysostaphin;locus_tag=GCA000144955_01424;product=lysostaphin;Parent=GCA000144955_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031970E7,UniRef:UniRef100_A0A2I6PER7,UniRef:UniRef50_Q2FYC8,UniRef:UniRef90_Q2FYC8
contig_1	Pyrodigal	gene	1536252	1536476	.	-	.	ID=GCA000144955_01425_gene;locus_tag=GCA000144955_01425
contig_1	Pyrodigal	CDS	1536252	1536476	.	-	0	ID=GCA000144955_01425;Name=Tail tape measure protein;locus_tag=GCA000144955_01425;product=Tail tape measure protein;Parent=GCA000144955_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2I6PEW8,UniRef:UniRef90_A0A2I6PEW8
contig_1	Pyrodigal	gene	1536490	1536648	.	-	.	ID=GCA000144955_01426_gene;locus_tag=GCA000144955_01426
contig_1	Pyrodigal	CDS	1536490	1536648	.	-	0	ID=GCA000144955_01426;Name=Phage protein;locus_tag=GCA000144955_01426;product=Phage protein;Parent=GCA000144955_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000438833.1,SO:0001217,UniParc:UPI00000541F4,UniRef:UniRef100_A0AAE9P536,UniRef:UniRef50_A0AAE9P536,UniRef:UniRef90_A0AAE9P536
contig_1	Pyrodigal	gene	1536690	1537040	.	-	.	ID=GCA000144955_01427_gene;locus_tag=GCA000144955_01427;gene=gpG
contig_1	Pyrodigal	CDS	1536690	1537040	.	-	0	ID=GCA000144955_01427;Name=phage tail assembly chaperone G;locus_tag=GCA000144955_01427;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000144955_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000589167.1,SO:0001217,UniParc:UPI00000541F5,UniRef:UniRef100_A0A2K9VBQ8,UniRef:UniRef50_A0A0K1LKJ0,UniRef:UniRef90_A0A0K1LKJ0
contig_1	Pyrodigal	gene	1537098	1537553	.	-	.	ID=GCA000144955_01428_gene;locus_tag=GCA000144955_01428
contig_1	Pyrodigal	CDS	1537098	1537553	.	-	0	ID=GCA000144955_01428;Name=ORF023;locus_tag=GCA000144955_01428;product=ORF023;Parent=GCA000144955_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169127.1,SO:0001217,UniParc:UPI00003B16B7,UniRef:UniRef100_A0A2K9VBR9,UniRef:UniRef50_Q4ZCT1,UniRef:UniRef90_Q4ZCT1
contig_1	Pyrodigal	gene	1537645	1538286	.	-	.	ID=GCA000144955_01429_gene;locus_tag=GCA000144955_01429
contig_1	Pyrodigal	CDS	1537645	1538286	.	-	0	ID=GCA000144955_01429;Name=Tail protein;locus_tag=GCA000144955_01429;product=Tail protein;Parent=GCA000144955_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000807536.1,SO:0001217,UniParc:UPI00000541F7,UniRef:UniRef100_Q2G2K1,UniRef:UniRef50_A0A2T4PZ36,UniRef:UniRef90_A0A9X9JV04
contig_1	Pyrodigal	gene	1538321	1538716	.	-	.	ID=GCA000144955_01430_gene;locus_tag=GCA000144955_01430
contig_1	Pyrodigal	CDS	1538321	1538716	.	-	0	ID=GCA000144955_01430;Name=DUF3168 domain-containing protein;locus_tag=GCA000144955_01430;product=DUF3168 domain-containing protein;Parent=GCA000144955_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001023806.1,SO:0001217,UniParc:UPI00000541F8,UniRef:UniRef100_A0A2K9VBQ2,UniRef:UniRef50_A0A1L7RV34,UniRef:UniRef90_R4WAV1
contig_1	Pyrodigal	gene	1538717	1539118	.	-	.	ID=GCA000144955_01431_gene;locus_tag=GCA000144955_01431
contig_1	Pyrodigal	CDS	1538717	1539118	.	-	0	ID=GCA000144955_01431;Name=PhiSLT protein;locus_tag=GCA000144955_01431;product=PhiSLT protein;Parent=GCA000144955_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110022.1,SO:0001217,UniParc:UPI0001DD9D75,UniRef:UniRef100_A0A2I6PEQ0,UniRef:UniRef50_A0A1L7RVH1,UniRef:UniRef90_A0A6G4ZMM4
contig_1	Pyrodigal	gene	1539115	1539447	.	-	.	ID=GCA000144955_01432_gene;locus_tag=GCA000144955_01432
contig_1	Pyrodigal	CDS	1539115	1539447	.	-	0	ID=GCA000144955_01432;Name=Phage protein;locus_tag=GCA000144955_01432;product=Phage protein;Parent=GCA000144955_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000395498.1,SO:0001217,UniParc:UPI00000541FA,UniRef:UniRef100_Q2G2S4,UniRef:UniRef50_M9QX19,UniRef:UniRef90_A0A9X9P522
contig_1	Pyrodigal	gene	1539459	1539737	.	-	.	ID=GCA000144955_01433_gene;locus_tag=GCA000144955_01433
contig_1	Pyrodigal	CDS	1539459	1539737	.	-	0	ID=GCA000144955_01433;Name=head-tail connector protein;locus_tag=GCA000144955_01433;product=head-tail connector protein;Dbxref=GO:0016032;Parent=GCA000144955_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000050973.1,SO:0001217,UniParc:UPI00000541FB,UniRef:UniRef100_A0AAE9P379,UniRef:UniRef50_R4WAL3,UniRef:UniRef90_R4WAL3
contig_1	Pyrodigal	gene	1539806	1540969	.	-	.	ID=GCA000144955_01434_gene;locus_tag=GCA000144955_01434
contig_1	Pyrodigal	CDS	1539806	1540969	.	-	0	ID=GCA000144955_01434;Name=phage major capsid protein;locus_tag=GCA000144955_01434;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000144955_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001142734.1,SO:0001217,UniParc:UPI000009B7B2,UniRef:UniRef100_A0A9E7MV44,UniRef:UniRef50_A0A1L7RSR1,UniRef:UniRef90_M1SVC5
contig_1	Pyrodigal	gene	1540981	1541754	.	-	.	ID=GCA000144955_01435_gene;locus_tag=GCA000144955_01435
contig_1	Pyrodigal	CDS	1540981	1541754	.	-	0	ID=GCA000144955_01435;Name=ATP-dependent Clp protease proteolytic subunit;locus_tag=GCA000144955_01435;product=ATP-dependent Clp protease proteolytic subunit;Parent=GCA000144955_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000061866.1,SO:0001217,UniParc:UPI000009C1AD,UniRef:UniRef100_Q2G2S1,UniRef:UniRef50_A0A2T4PZ65,UniRef:UniRef90_A0AAJ4YUJ4
contig_1	Pyrodigal	gene	1541738	1542976	.	-	.	ID=GCA000144955_01436_gene;locus_tag=GCA000144955_01436
contig_1	Pyrodigal	CDS	1541738	1542976	.	-	0	ID=GCA000144955_01436;Name=phage portal protein;locus_tag=GCA000144955_01436;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000144955_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001100664.1,SO:0001217,UniParc:UPI0000696C40,UniRef:UniRef100_A0A977XRN3,UniRef:UniRef50_A0A077RGY7,UniRef:UniRef90_A0A977XRN3
contig_1	Pyrodigal	gene	1542981	1544672	.	-	.	ID=GCA000144955_01437_gene;locus_tag=GCA000144955_01437
contig_1	Pyrodigal	CDS	1542981	1544672	.	-	0	ID=GCA000144955_01437;Name=Terminase large subunit;locus_tag=GCA000144955_01437;product=Terminase large subunit;Parent=GCA000144955_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000153540.1,SO:0001217,UniParc:UPI0000505959,UniRef:UniRef100_A0A8E7KZI2,UniRef:UniRef50_A0A429X5P5,UniRef:UniRef90_B5WZP1
contig_1	Pyrodigal	gene	1544662	1544967	.	-	.	ID=GCA000144955_01438_gene;locus_tag=GCA000144955_01438
contig_1	Pyrodigal	CDS	1544662	1544967	.	-	0	ID=GCA000144955_01438;Name=Terminase small subunit;locus_tag=GCA000144955_01438;product=Terminase small subunit;Parent=GCA000144955_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778933.1,SO:0001217,UniParc:UPI0000054200,UniRef:UniRef100_Q2FYC5,UniRef:UniRef50_A0A073K507,UniRef:UniRef90_A0A2I6PDN6
contig_1	Pyrodigal	gene	1545094	1545408	.	-	.	ID=GCA000144955_01439_gene;locus_tag=GCA000144955_01439
contig_1	Pyrodigal	CDS	1545094	1545408	.	-	0	ID=GCA000144955_01439;Name=HNH endonuclease;locus_tag=GCA000144955_01439;product=HNH endonuclease;Parent=GCA000144955_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000160686.1,SO:0001217,UniParc:UPI0000696C41,UniRef:UniRef100_A0A977XQL3,UniRef:UniRef50_A0A0H3JWK3,UniRef:UniRef90_A0A977XQL3
contig_1	Pyrodigal	gene	1545565	1546002	.	-	.	ID=GCA000144955_01440_gene;locus_tag=GCA000144955_01440
contig_1	Pyrodigal	CDS	1545565	1546002	.	-	0	ID=GCA000144955_01440;Name=Transcriptional regulator;locus_tag=GCA000144955_01440;product=Transcriptional regulator;Parent=GCA000144955_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000528512.1,SO:0001217,UniParc:UPI000009B96E,UniRef:UniRef100_A0A345AQA4,UniRef:UniRef50_R4WCU7,UniRef:UniRef90_R4WCU7
contig_1	Pyrodigal	gene	1546015	1547373	.	-	.	ID=GCA000144955_01441_gene;locus_tag=GCA000144955_01441
contig_1	Pyrodigal	CDS	1546015	1547373	.	-	0	ID=GCA000144955_01441;Name=DNA helicase;locus_tag=GCA000144955_01441;product=DNA helicase;Parent=GCA000144955_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A411BM78,UniRef:UniRef90_A0A411BM78
contig_1	Pyrodigal	gene	1547363	1547653	.	-	.	ID=GCA000144955_01442_gene;locus_tag=GCA000144955_01442
contig_1	Pyrodigal	CDS	1547363	1547653	.	-	0	ID=GCA000144955_01442;Name=VRR-NUC domain-containing protein;locus_tag=GCA000144955_01442;product=VRR-NUC domain-containing protein;Parent=GCA000144955_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000665203.1,SO:0001217,UniParc:UPI0000054204,UniRef:UniRef100_Q2FYC1,UniRef:UniRef50_A7TWI5,UniRef:UniRef90_A7TWI5
contig_1	Pyrodigal	gene	1547994	1550441	.	-	.	ID=GCA000144955_01443_gene;locus_tag=GCA000144955_01443
contig_1	Pyrodigal	CDS	1547994	1550441	.	-	0	ID=GCA000144955_01443;Name=Virulence-associated protein E-like domain-containing protein;locus_tag=GCA000144955_01443;product=Virulence-associated protein E-like domain-containing protein;Parent=GCA000144955_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000884870.1,SO:0001217,UniParc:UPI00000D9E1B,UniRef:UniRef100_U5U4T5,UniRef:UniRef50_A0A419SQH7,UniRef:UniRef90_U5U4T5
contig_1	Pyrodigal	gene	1550496	1550702	.	+	.	ID=GCA000144955_01444_gene;locus_tag=GCA000144955_01444
contig_1	Pyrodigal	CDS	1550496	1550702	.	+	0	ID=GCA000144955_01444;Name=hypothetical protein;locus_tag=GCA000144955_01444;product=hypothetical protein;Parent=GCA000144955_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548893.1,SO:0001217,UniParc:UPI00000D9E1C,UniRef:UniRef100_A0A1X9IGZ9,UniRef:UniRef50_A0A1X9IGZ9,UniRef:UniRef90_A0A1X9IGZ9
contig_1	Pyrodigal	gene	1550729	1550929	.	-	.	ID=GCA000144955_01445_gene;locus_tag=GCA000144955_01445
contig_1	Pyrodigal	CDS	1550729	1550929	.	-	0	ID=GCA000144955_01445;Name=DUF1514 domain-containing protein;locus_tag=GCA000144955_01445;product=DUF1514 domain-containing protein;Parent=GCA000144955_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000265252.1,SO:0001217,UniParc:UPI00000D9E1D,UniRef:UniRef100_A0A977TFN6,UniRef:UniRef50_A0A0K1LL54,UniRef:UniRef90_A0A0K1LL54
contig_1	Bakta	gene	1550932	1551003	.	-	.	ID=GCA000144955_01446_gene;locus_tag=GCA000144955_01446;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1550932	1551003	.	-	0	ID=GCA000144955_01446;Name=Hypothetical phage protein;locus_tag=GCA000144955_01446;product=Hypothetical phage protein;Parent=GCA000144955_01446_gene;Note=SO:0001217,UniParc:UPI00003B16C3,UniRef:UniRef100_A0A7U7EV04,UniRef:UniRef50_A0A7U7EV04,UniRef:UniRef90_A0A7U7EV04
contig_1	Pyrodigal	gene	1550997	1551149	.	-	.	ID=GCA000144955_01447_gene;locus_tag=GCA000144955_01447;gene=rinB
contig_1	Pyrodigal	CDS	1550997	1551149	.	-	0	ID=GCA000144955_01447;Name=transcriptional activator RinB;locus_tag=GCA000144955_01447;product=transcriptional activator RinB;gene=rinB;Parent=GCA000144955_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595263.1,SO:0001217,UniParc:UPI00003B1AA3,UniRef:UniRef100_A0AAE7AJY6,UniRef:UniRef50_A0A2I6PE89,UniRef:UniRef90_A0A9X9K0S8
contig_1	Pyrodigal	gene	1551146	1551535	.	-	.	ID=GCA000144955_01448_gene;locus_tag=GCA000144955_01448
contig_1	Pyrodigal	CDS	1551146	1551535	.	-	0	ID=GCA000144955_01448;Name=secreted protein;locus_tag=GCA000144955_01448;product=secreted protein;Parent=GCA000144955_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH08,UniRef:UniRef90_UPI0013665542
contig_1	Pyrodigal	gene	1551525	1551761	.	-	.	ID=GCA000144955_01449_gene;locus_tag=GCA000144955_01449
contig_1	Pyrodigal	CDS	1551525	1551761	.	-	0	ID=GCA000144955_01449;Name=Phage protein;locus_tag=GCA000144955_01449;product=Phage protein;Parent=GCA000144955_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A9CR94,UniRef:UniRef90_A9CR94
contig_1	Pyrodigal	gene	1551754	1551957	.	-	.	ID=GCA000144955_01450_gene;locus_tag=GCA000144955_01450
contig_1	Pyrodigal	CDS	1551754	1551957	.	-	0	ID=GCA000144955_01450;Name=Phage protein;locus_tag=GCA000144955_01450;product=Phage protein;Parent=GCA000144955_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141180.1,SO:0001217,UniParc:UPI0000696C44,UniRef:UniRef100_A0A977XPX7,UniRef:UniRef50_A0A2K4ANQ7,UniRef:UniRef90_A0A2K4ANQ7
contig_1	Pyrodigal	gene	1551954	1552160	.	-	.	ID=GCA000144955_01451_gene;locus_tag=GCA000144955_01451
contig_1	Pyrodigal	CDS	1551954	1552160	.	-	0	ID=GCA000144955_01451;Name=DUF1381 domain-containing protein;locus_tag=GCA000144955_01451;product=DUF1381 domain-containing protein;Parent=GCA000144955_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000195794.1,SO:0001217,UniParc:UPI0000696C45,UniRef:UniRef100_A0A977XR61,UniRef:UniRef50_A9CR91,UniRef:UniRef90_A0A0C6ELC0
contig_1	Pyrodigal	gene	1552197	1552733	.	-	.	ID=GCA000144955_01452_gene;locus_tag=GCA000144955_01452
contig_1	Pyrodigal	CDS	1552197	1552733	.	-	0	ID=GCA000144955_01452;Name=dUTPase;locus_tag=GCA000144955_01452;product=dUTPase;Parent=GCA000144955_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000185671.1,SO:0001217,UniParc:UPI0000696C46,UniRef:UniRef100_A0A977XQL0,UniRef:UniRef50_A0A7U7JTE6,UniRef:UniRef90_U5U798
contig_1	Pyrodigal	gene	1552726	1552974	.	-	.	ID=GCA000144955_01453_gene;locus_tag=GCA000144955_01453
contig_1	Pyrodigal	CDS	1552726	1552974	.	-	0	ID=GCA000144955_01453;Name=DUF1024 domain-containing protein;locus_tag=GCA000144955_01453;product=DUF1024 domain-containing protein;Parent=GCA000144955_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065039.1,SO:0001217,UniParc:UPI0000696C47,UniRef:UniRef100_A0A977TFE3,UniRef:UniRef50_A9CR86,UniRef:UniRef90_A0A0N9BAY6
contig_1	Pyrodigal	gene	1552989	1553231	.	-	.	ID=GCA000144955_01454_gene;locus_tag=GCA000144955_01454
contig_1	Pyrodigal	CDS	1552989	1553231	.	-	0	ID=GCA000144955_01454;Name=Phage protein;locus_tag=GCA000144955_01454;product=Phage protein;Parent=GCA000144955_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000132194.1,SO:0001217,UniParc:UPI0000696C48,UniRef:UniRef100_A0A977XQ34,UniRef:UniRef50_A9CR79,UniRef:UniRef90_M9NRL7
contig_1	Pyrodigal	gene	1553246	1553446	.	-	.	ID=GCA000144955_01455_gene;locus_tag=GCA000144955_01455
contig_1	Pyrodigal	CDS	1553246	1553446	.	-	0	ID=GCA000144955_01455;Name=Phage protein;locus_tag=GCA000144955_01455;product=Phage protein;Parent=GCA000144955_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000235324.1,SO:0001217,UniParc:UPI00003B16CD,UniRef:UniRef100_A0A977XRQ6,UniRef:UniRef50_C5I650,UniRef:UniRef90_C5I650
contig_1	Pyrodigal	gene	1553449	1553706	.	-	.	ID=GCA000144955_01456_gene;locus_tag=GCA000144955_01456
contig_1	Pyrodigal	CDS	1553449	1553706	.	-	0	ID=GCA000144955_01456;Name=DUF3310 domain-containing protein;locus_tag=GCA000144955_01456;product=DUF3310 domain-containing protein;Parent=GCA000144955_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000022728.1,SO:0001217,UniParc:UPI00000D9E28,UniRef:UniRef100_A0AAE7AJX8,UniRef:UniRef50_B2ZYW4,UniRef:UniRef90_B2ZYW4
contig_1	Pyrodigal	gene	1553706	1554107	.	-	.	ID=GCA000144955_01457_gene;locus_tag=GCA000144955_01457
contig_1	Pyrodigal	CDS	1553706	1554107	.	-	0	ID=GCA000144955_01457;Name=PVL family protein;locus_tag=GCA000144955_01457;product=PVL family protein;Parent=GCA000144955_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000113974.1,SO:0001217,UniParc:UPI00000D9E29,UniRef:UniRef100_A0A2K9VBY6,UniRef:UniRef50_A0A2I6PEE6,UniRef:UniRef90_A0A2D1G5N4
contig_1	Pyrodigal	gene	1554107	1554292	.	-	.	ID=GCA000144955_01458_gene;locus_tag=GCA000144955_01458
contig_1	Pyrodigal	CDS	1554107	1554292	.	-	0	ID=GCA000144955_01458;Name=DUF3113 domain-containing protein;locus_tag=GCA000144955_01458;product=DUF3113 domain-containing protein;Parent=GCA000144955_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001164629.1,SO:0001217,UniParc:UPI0000054219,UniRef:UniRef100_Q2FYA2,UniRef:UniRef50_G5JH61,UniRef:UniRef90_M9QQK5
contig_1	Pyrodigal	gene	1554305	1556266	.	-	.	ID=GCA000144955_01459_gene;locus_tag=GCA000144955_01459
contig_1	Pyrodigal	CDS	1554305	1556266	.	-	0	ID=GCA000144955_01459;Name=DNA polymerase;locus_tag=GCA000144955_01459;product=DNA polymerase;Parent=GCA000144955_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02334,SO:0001217,UniParc:UPI00000D9E2A,UniRef:UniRef100_A0A977TEK8,UniRef:UniRef50_B5WZM5,UniRef:UniRef90_B5WZM5;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1556325	1556882	.	-	.	ID=GCA000144955_01460_gene;locus_tag=GCA000144955_01460
contig_1	Pyrodigal	CDS	1556325	1556882	.	-	0	ID=GCA000144955_01460;Name=DUF2815 domain-containing protein;locus_tag=GCA000144955_01460;product=DUF2815 domain-containing protein;Parent=GCA000144955_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000645048.1,SO:0001217,UniParc:UPI00000D9E2B,UniRef:UniRef100_M1TB24,UniRef:UniRef50_B8I925,UniRef:UniRef90_M1TB24
contig_1	Pyrodigal	gene	1556908	1558074	.	-	.	ID=GCA000144955_01461_gene;locus_tag=GCA000144955_01461
contig_1	Pyrodigal	CDS	1556908	1558074	.	-	0	ID=GCA000144955_01461;Name=DUF2800 domain-containing protein;locus_tag=GCA000144955_01461;product=DUF2800 domain-containing protein;Parent=GCA000144955_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000762552.1,SO:0001217,UniParc:UPI00000D9E2C,UniRef:UniRef100_A0AAE7DT35,UniRef:UniRef50_B5WZM3,UniRef:UniRef90_B5WZM3
contig_1	Pyrodigal	gene	1558071	1558433	.	-	.	ID=GCA000144955_01462_gene;locus_tag=GCA000144955_01462
contig_1	Pyrodigal	CDS	1558071	1558433	.	-	0	ID=GCA000144955_01462;Name=Phage protein;locus_tag=GCA000144955_01462;product=Phage protein;Parent=GCA000144955_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985979.1,SO:0001217,UniParc:UPI00000D9E2D,UniRef:UniRef100_A0AAE7AJY3,UniRef:UniRef50_A0A0K1LKE9,UniRef:UniRef90_A0A0K1LKE9
contig_1	Pyrodigal	gene	1558447	1558707	.	-	.	ID=GCA000144955_01463_gene;locus_tag=GCA000144955_01463
contig_1	Pyrodigal	CDS	1558447	1558707	.	-	0	ID=GCA000144955_01463;Name=DUF1108 domain-containing protein;locus_tag=GCA000144955_01463;product=DUF1108 domain-containing protein;Parent=GCA000144955_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291481.1,SO:0001217,UniParc:UPI0000696C4A,UniRef:UniRef100_A0A977XQ15,UniRef:UniRef50_A0A2I6PDT0,UniRef:UniRef90_A0A977XQ15
contig_1	Pyrodigal	gene	1558712	1559014	.	-	.	ID=GCA000144955_01464_gene;locus_tag=GCA000144955_01464
contig_1	Pyrodigal	CDS	1558712	1559014	.	-	0	ID=GCA000144955_01464;Name=DUF2482 domain-containing protein;locus_tag=GCA000144955_01464;product=DUF2482 domain-containing protein;Parent=GCA000144955_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000163431.1,SO:0001217,UniParc:UPI00015FD725,UniRef:UniRef100_A0A977XRM7,UniRef:UniRef50_A0A2I6PE07,UniRef:UniRef90_A0A2I6PE07
contig_1	Pyrodigal	gene	1559007	1559324	.	-	.	ID=GCA000144955_01465_gene;locus_tag=GCA000144955_01465
contig_1	Pyrodigal	CDS	1559007	1559324	.	-	0	ID=GCA000144955_01465;Name=Phage protein;locus_tag=GCA000144955_01465;product=Phage protein;Parent=GCA000144955_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829612.1,SO:0001217,UniParc:UPI0000696C4B,UniRef:UniRef100_A0A977XPX5,UniRef:UniRef50_M9NUK8,UniRef:UniRef90_M9NUK8
contig_1	Pyrodigal	gene	1559417	1559578	.	-	.	ID=GCA000144955_01466_gene;locus_tag=GCA000144955_01466
contig_1	Pyrodigal	CDS	1559417	1559578	.	-	0	ID=GCA000144955_01466;Name=Phage protein;locus_tag=GCA000144955_01466;product=Phage protein;Parent=GCA000144955_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001285951.1,SO:0001217,UniParc:UPI0001C14B71,UniRef:UniRef100_A0A977TES0,UniRef:UniRef50_B2ZYU9,UniRef:UniRef90_B2ZYU9
contig_1	Pyrodigal	gene	1559590	1559853	.	-	.	ID=GCA000144955_01467_gene;locus_tag=GCA000144955_01467
contig_1	Pyrodigal	CDS	1559590	1559853	.	-	0	ID=GCA000144955_01467;Name=DNA-binding protein;locus_tag=GCA000144955_01467;product=DNA-binding protein;Parent=GCA000144955_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAE8Z0C4,UniRef:UniRef90_A0AAE8Z0C4
contig_1	Pyrodigal	gene	1559878	1560093	.	-	.	ID=GCA000144955_01468_gene;locus_tag=GCA000144955_01468
contig_1	Pyrodigal	CDS	1559878	1560093	.	-	0	ID=GCA000144955_01468;Name=Phage protein;locus_tag=GCA000144955_01468;product=Phage protein;Parent=GCA000144955_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001036299.1,SO:0001217,UniParc:UPI00003B1A93,UniRef:UniRef100_A0A977TFT7,UniRef:UniRef50_A0A898CJM3,UniRef:UniRef90_A0A898CJM3
contig_1	Pyrodigal	gene	1560140	1560379	.	+	.	ID=GCA000144955_01469_gene;locus_tag=GCA000144955_01469
contig_1	Pyrodigal	CDS	1560140	1560379	.	+	0	ID=GCA000144955_01469;Name=hypothetical protein;locus_tag=GCA000144955_01469;product=hypothetical protein;Parent=GCA000144955_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_103146194.1,SO:0001217,UniParc:UPI000CA1AA73,UniRef:UniRef100_A0A9X9P2D6,UniRef:UniRef50_A0A0H3U2T9,UniRef:UniRef90_A0A0H3U2T9
contig_1	Pyrodigal	gene	1560376	1560552	.	-	.	ID=GCA000144955_01470_gene;locus_tag=GCA000144955_01470
contig_1	Pyrodigal	CDS	1560376	1560552	.	-	0	ID=GCA000144955_01470;Name=hypothetical protein;locus_tag=GCA000144955_01470;product=hypothetical protein;Parent=GCA000144955_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001001356.1,SO:0001217,UniParc:UPI00003B1A91,UniRef:UniRef100_A0A2C9TR45,UniRef:UniRef50_A0A2C9TR45,UniRef:UniRef90_A0A2C9TR45
contig_1	Pyrodigal	gene	1560636	1560827	.	-	.	ID=GCA000144955_01471_gene;locus_tag=GCA000144955_01471
contig_1	Pyrodigal	CDS	1560636	1560827	.	-	0	ID=GCA000144955_01471;Name=XRE family transcriptional regulator;locus_tag=GCA000144955_01471;product=XRE family transcriptional regulator;Parent=GCA000144955_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001115060.1,SO:0001217,UniParc:UPI00000CAE86,UniRef:UniRef100_A0A977XRP8,UniRef:UniRef50_A0AAE7P0Q9,UniRef:UniRef90_A0AA40JN51
contig_1	Pyrodigal	gene	1560988	1561317	.	+	.	ID=GCA000144955_01472_gene;locus_tag=GCA000144955_01472
contig_1	Pyrodigal	CDS	1560988	1561317	.	+	0	ID=GCA000144955_01472;Name=DNA-binding helix-turn-helix protein;locus_tag=GCA000144955_01472;product=DNA-binding helix-turn-helix protein;Parent=GCA000144955_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429766.1,SO:0001217,UniParc:UPI00000CAE85,UniRef:UniRef100_A0AAE7ANM5,UniRef:UniRef50_A0A364JKZ8,UniRef:UniRef90_A0A0K1LKK8
contig_1	Pyrodigal	gene	1561321	1561791	.	+	.	ID=GCA000144955_01473_gene;locus_tag=GCA000144955_01473
contig_1	Pyrodigal	CDS	1561321	1561791	.	+	0	ID=GCA000144955_01473;Name=Toxin;locus_tag=GCA000144955_01473;product=Toxin;Parent=GCA000144955_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001566046.1,SO:0001217,UniParc:UPI0002550C55,UniRef:UniRef100_A0A977XQM7,UniRef:UniRef50_M9NUH9,UniRef:UniRef90_A0A0H3JQL7
contig_1	Pyrodigal	gene	1561809	1562243	.	+	.	ID=GCA000144955_01474_gene;locus_tag=GCA000144955_01474
contig_1	Pyrodigal	CDS	1561809	1562243	.	+	0	ID=GCA000144955_01474;Name=Lipoprotein;locus_tag=GCA000144955_01474;product=Lipoprotein;Parent=GCA000144955_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755718.1,SO:0001217,UniParc:UPI000009B60A,UniRef:UniRef100_A0AAE7ANX8,UniRef:UniRef50_A0A641ACN8,UniRef:UniRef90_A0A641ACN8
contig_1	Pyrodigal	gene	1562272	1562667	.	+	.	ID=GCA000144955_01475_gene;locus_tag=GCA000144955_01475
contig_1	Pyrodigal	CDS	1562272	1562667	.	+	0	ID=GCA000144955_01475;Name=Phage protein;locus_tag=GCA000144955_01475;product=Phage protein;Parent=GCA000144955_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449655.1,SO:0001217,UniParc:UPI000009B36B,UniRef:UniRef100_A0A2K9VBV5,UniRef:UniRef50_A0ZS06,UniRef:UniRef90_A0A0H3JWE4
contig_1	Pyrodigal	gene	1562778	1562903	.	+	.	ID=GCA000144955_01476_gene;locus_tag=GCA000144955_01476
contig_1	Pyrodigal	CDS	1562778	1562903	.	+	0	ID=GCA000144955_01476;Name=Staphylokinase;locus_tag=GCA000144955_01476;product=Staphylokinase;Parent=GCA000144955_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000227849.1,SO:0001217,UniParc:UPI00016991FC,UniRef:UniRef100_A0A9X9JWJ2,UniRef:UniRef50_A0A9X9JZX3,UniRef:UniRef90_A0A9X9JWJ2
contig_1	Pyrodigal	gene	1562900	1563514	.	-	.	ID=GCA000144955_01477_gene;locus_tag=GCA000144955_01477
contig_1	Pyrodigal	CDS	1562900	1563514	.	-	0	ID=GCA000144955_01477;Name=ATPase;locus_tag=GCA000144955_01477;product=ATPase;Parent=GCA000144955_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000191466.1,SO:0001217,UniParc:UPI000009BB14,UniRef:UniRef100_Q4ZCR5,UniRef:UniRef50_O80069,UniRef:UniRef90_O80069
contig_1	Pyrodigal	gene	1563640	1564845	.	+	.	ID=GCA000144955_01478_gene;locus_tag=GCA000144955_01478
contig_1	Pyrodigal	CDS	1563640	1564845	.	+	0	ID=GCA000144955_01478;Name=Integrase;locus_tag=GCA000144955_01478;product=Integrase;Parent=GCA000144955_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000264751.1,SO:0001217,UniParc:UPI000009C32E,UniRef:UniRef100_A0A345AQ68,UniRef:UniRef50_P20709,UniRef:UniRef90_A0A977TEW5
contig_1	Pyrodigal	gene	1564888	1566915	.	-	.	ID=GCA000144955_01479_gene;locus_tag=GCA000144955_01479
contig_1	Pyrodigal	CDS	1564888	1566915	.	-	0	ID=GCA000144955_01479;Name=Lipoprotein;locus_tag=GCA000144955_01479;product=Lipoprotein;Parent=GCA000144955_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532762.1,SO:0001217,UniParc:UPI0001DD9F08,UniRef:UniRef100_UPI0001DD9F08,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0A7U7JUS1
contig_1	Pyrodigal	gene	1566908	1567837	.	-	.	ID=GCA000144955_01480_gene;locus_tag=GCA000144955_01480
contig_1	Pyrodigal	CDS	1566908	1567837	.	-	0	ID=GCA000144955_01480;Name=Lipoprotein;locus_tag=GCA000144955_01480;product=Lipoprotein;Parent=GCA000144955_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044025897.1,SO:0001217,UniParc:UPI0005C53C28,UniRef:UniRef100_UPI0012446E6B,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_A0A7U7PYB6
contig_1	Pyrodigal	gene	1568081	1569832	.	-	.	ID=GCA000144955_01481_gene;locus_tag=GCA000144955_01481;gene=srrB
contig_1	Pyrodigal	CDS	1568081	1569832	.	-	0	ID=GCA000144955_01481;Name=two-component system sensor histidine kinase SrrB;locus_tag=GCA000144955_01481;product=two-component system sensor histidine kinase SrrB;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0007234,GO:0030295;gene=srrB;Parent=GCA000144955_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000987769,COG:COG5002,COG:T,KEGG:K07651,RefSeq:WP_000987778.1,SO:0001217,UniParc:UPI0001DD9F0A,UniRef:UniRef100_UPI0001DD9F0A,UniRef:UniRef50_Q9L523,UniRef:UniRef90_Q9L523;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1569813	1570538	.	-	.	ID=GCA000144955_01482_gene;locus_tag=GCA000144955_01482;gene=srrA
contig_1	Pyrodigal	CDS	1569813	1570538	.	-	0	ID=GCA000144955_01482;Name=two-component system response regulator SrrA;locus_tag=GCA000144955_01482;product=two-component system response regulator SrrA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=srrA;Parent=GCA000144955_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000064078,COG:COG0745,COG:TK,RefSeq:WP_000064078.1,SO:0001217,UniParc:UPI00000D76FC,UniRef:UniRef100_Q2FY79,UniRef:UniRef50_P35163,UniRef:UniRef90_Q2FY79
contig_1	Pyrodigal	gene	1570671	1571408	.	-	.	ID=GCA000144955_01483_gene;locus_tag=GCA000144955_01483;gene=rsuA
contig_1	Pyrodigal	CDS	1570671	1571408	.	-	0	ID=GCA000144955_01483;Name=Pseudouridine synthase;locus_tag=GCA000144955_01483;product=Pseudouridine synthase;gene=rsuA;Parent=GCA000144955_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_000159573.1,SO:0001217,UniParc:UPI0001DD9F0B,UniRef:UniRef100_UPI0001DD9F0B,UniRef:UniRef50_A0A090YKY4,UniRef:UniRef90_A0A7U7IEK5
contig_1	Pyrodigal	gene	1571401	1571943	.	-	.	ID=GCA000144955_01484_gene;locus_tag=GCA000144955_01484;gene=scpB
contig_1	Pyrodigal	CDS	1571401	1571943	.	-	0	ID=GCA000144955_01484;Name=SMC-Scp complex subunit ScpB;locus_tag=GCA000144955_01484;product=SMC-Scp complex subunit ScpB;Dbxref=GO:0005515,GO:0005737,GO:0006260,GO:0007059,GO:0051301,GO:0051304;gene=scpB;Parent=GCA000144955_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1386,COG:K,KEGG:K06024,RefSeq:WP_000368649.1,SO:0001217,UniParc:UPI0001DD9F0C,UniRef:UniRef100_A0A5S9C6A9,UniRef:UniRef50_Q2FY77,UniRef:UniRef90_Q2FY77
contig_1	Pyrodigal	gene	1571936	1572691	.	-	.	ID=GCA000144955_01485_gene;locus_tag=GCA000144955_01485;gene=scpA
contig_1	Pyrodigal	CDS	1571936	1572691	.	-	0	ID=GCA000144955_01485;Name=Segregation and condensation protein A;locus_tag=GCA000144955_01485;product=Segregation and condensation protein A;Dbxref=GO:0005737,GO:0006260,GO:0007059,GO:0051301;gene=scpA;Parent=GCA000144955_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1354,COG:L,KEGG:K05896,SO:0001217,UniRef:UniRef50_Q6GGK3,UniRef:UniRef90_Q6GGK3
contig_1	Pyrodigal	gene	1572759	1573265	.	+	.	ID=GCA000144955_01486_gene;locus_tag=GCA000144955_01486;gene=ypuF
contig_1	Pyrodigal	CDS	1572759	1573265	.	+	0	ID=GCA000144955_01486;Name=Cytosolic protein;locus_tag=GCA000144955_01486;product=Cytosolic protein;gene=ypuF;Parent=GCA000144955_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1547,COG:S,KEGG:K09763,RefSeq:WP_001183441.1,SO:0001217,UniParc:UPI0001DD9F0E,UniRef:UniRef100_UPI0001DD9F0E,UniRef:UniRef50_Q2FY75,UniRef:UniRef90_Q2FY75
contig_1	Pyrodigal	gene	1573343	1574230	.	-	.	ID=GCA000144955_01487_gene;locus_tag=GCA000144955_01487;gene=xerD
contig_1	Pyrodigal	CDS	1573343	1574230	.	-	0	ID=GCA000144955_01487;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000144955_01487;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000144955_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_000447728.1,SO:0001217,UniParc:UPI0001C0BDD0,UniRef:UniRef100_A0A8G2HWQ4,UniRef:UniRef50_Q5HFS5,UniRef:UniRef90_Q5HFS5
contig_1	Pyrodigal	gene	1574279	1574728	.	-	.	ID=GCA000144955_01488_gene;locus_tag=GCA000144955_01488;gene=fur
contig_1	Pyrodigal	CDS	1574279	1574728	.	-	0	ID=GCA000144955_01488;Name=Transcriptional regulator%2C Fur%2C putative;locus_tag=GCA000144955_01488;product=Transcriptional regulator%2C Fur%2C putative;gene=fur;Parent=GCA000144955_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_000392691.1,SO:0001217,UniParc:UPI00000D782F,UniRef:UniRef100_Q2FY73,UniRef:UniRef50_Q2FY73,UniRef:UniRef90_Q2FY73
contig_1	Pyrodigal	gene	1574833	1575375	.	-	.	ID=GCA000144955_01489_gene;locus_tag=GCA000144955_01489;gene=mutT
contig_1	Pyrodigal	CDS	1574833	1575375	.	-	0	ID=GCA000144955_01489;Name=GDP-mannose pyrophosphatase;locus_tag=GCA000144955_01489;product=GDP-mannose pyrophosphatase;gene=mutT;Parent=GCA000144955_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000365247.1,SO:0001217,UniParc:UPI0001DD9F0F,UniRef:UniRef100_UPI0001DD9F0F,UniRef:UniRef50_A0A8I0L781,UniRef:UniRef90_A0A8I0L781
contig_1	Pyrodigal	gene	1575457	1576365	.	+	.	ID=GCA000144955_01490_gene;locus_tag=GCA000144955_01490;gene=pdxI
contig_1	Pyrodigal	CDS	1575457	1576365	.	+	0	ID=GCA000144955_01490;Name=NADPH-dependent aldo-keto reductase;locus_tag=GCA000144955_01490;product=NADPH-dependent aldo-keto reductase;gene=pdxI;Parent=GCA000144955_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_001171331.1,SO:0001217,UniParc:UPI0001DD9F10,UniRef:UniRef100_UPI0001DD9F10,UniRef:UniRef50_A0A380G9Q4,UniRef:UniRef90_A0A7U7JUR9
contig_1	Pyrodigal	gene	1576581	1576829	.	-	.	ID=GCA000144955_01491_gene;locus_tag=GCA000144955_01491
contig_1	Pyrodigal	CDS	1576581	1576829	.	-	0	ID=GCA000144955_01491;Name=Phage protein;locus_tag=GCA000144955_01491;product=Phage protein;Parent=GCA000144955_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000995805.1,SO:0001217,UniParc:UPI0001DD9F11,UniRef:UniRef100_UPI0001DD9F11,UniRef:UniRef50_A0A2K4AGQ5,UniRef:UniRef90_A0A6A9GX39
contig_1	Pyrodigal	gene	1576845	1577600	.	-	.	ID=GCA000144955_01492_gene;locus_tag=GCA000144955_01492;gene=hetN
contig_1	Pyrodigal	CDS	1576845	1577600	.	-	0	ID=GCA000144955_01492;Name=HetN;locus_tag=GCA000144955_01492;product=HetN;gene=hetN;Parent=GCA000144955_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678223.1,SO:0001217,UniParc:UPI0001DD9F12,UniRef:UniRef100_UPI0001DD9F12,UniRef:UniRef50_A0A7I8NJV3,UniRef:UniRef90_A0A0D1HST1
contig_1	Pyrodigal	gene	1577742	1578557	.	+	.	ID=GCA000144955_01493_gene;locus_tag=GCA000144955_01493;gene=proC
contig_1	Pyrodigal	CDS	1577742	1578557	.	+	0	ID=GCA000144955_01493;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000144955_01493;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0004735,GO:0005737,GO:0006561,GO:0055129;gene=proC;Parent=GCA000144955_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0345,COG:E,RefSeq:WP_000779748.1,SO:0001217,UniParc:UPI00003B16E7,UniRef:UniRef100_Q5HFR9,UniRef:UniRef50_Q49XV0,UniRef:UniRef90_Q99TZ0;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	1578660	1579580	.	-	.	ID=GCA000144955_01494_gene;locus_tag=GCA000144955_01494;gene=rnz
contig_1	Pyrodigal	CDS	1578660	1579580	.	-	0	ID=GCA000144955_01494;Name=ribonuclease Z;locus_tag=GCA000144955_01494;product=ribonuclease Z;Dbxref=GO:0008270,GO:0016891,GO:0042780,GO:0042781;gene=rnz;Parent=GCA000144955_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1234,COG:J,RefSeq:WP_000454064.1,SO:0001217,UniParc:UPI0000054300,UniRef:UniRef100_Q2FY67,UniRef:UniRef50_Q2FY67,UniRef:UniRef90_Q2FY67;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	1579895	1581379	.	+	.	ID=GCA000144955_01495_gene;locus_tag=GCA000144955_01495;gene=zwf
contig_1	Pyrodigal	CDS	1579895	1581379	.	+	0	ID=GCA000144955_01495;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000144955_01495;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0006006,GO:0006098,GO:0016614,GO:0050661;gene=zwf;Parent=GCA000144955_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,RefSeq:WP_000105077.1,SO:0001217,UniParc:UPI0001DDA085,UniRef:UniRef100_UPI0001DDA085,UniRef:UniRef50_Q5HP46,UniRef:UniRef90_Q5HP46;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1581609	1582475	.	+	.	ID=GCA000144955_01496_gene;locus_tag=GCA000144955_01496;gene=araC
contig_1	Pyrodigal	CDS	1581609	1582475	.	+	0	ID=GCA000144955_01496;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000144955_01496;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000144955_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000382585.1,SO:0001217,UniParc:UPI00000CAA4E,UniRef:UniRef100_A0A7Z7QZU6,UniRef:UniRef50_Q2FY65,UniRef:UniRef90_Q2FY65
contig_1	Pyrodigal	gene	1582558	1584207	.	-	.	ID=GCA000144955_01497_gene;locus_tag=GCA000144955_01497;gene=amyA
contig_1	Pyrodigal	CDS	1582558	1584207	.	-	0	ID=GCA000144955_01497;Name=Alpha-amylase;locus_tag=GCA000144955_01497;product=Alpha-amylase;gene=amyA;Parent=GCA000144955_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_001041934.1,SO:0001217,UniParc:UPI0001DDA086,UniRef:UniRef100_UPI0001DDA086,UniRef:UniRef50_O05242,UniRef:UniRef90_A0A7Z7QZR5
contig_1	Pyrodigal	gene	1584223	1585242	.	-	.	ID=GCA000144955_01498_gene;locus_tag=GCA000144955_01498;gene=purR
contig_1	Pyrodigal	CDS	1584223	1585242	.	-	0	ID=GCA000144955_01498;Name=Transcriptional regulator%2C putative;locus_tag=GCA000144955_01498;product=Transcriptional regulator%2C putative;gene=purR;Parent=GCA000144955_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000256324.1,SO:0001217,UniParc:UPI0001DDA087,UniRef:UniRef100_UPI0001DDA087,UniRef:UniRef50_Q2FY63,UniRef:UniRef90_Q2FY63
contig_1	Pyrodigal	gene	1585436	1585807	.	-	.	ID=GCA000144955_01499_gene;locus_tag=GCA000144955_01499;gene=gloA
contig_1	Pyrodigal	CDS	1585436	1585807	.	-	0	ID=GCA000144955_01499;Name=Glyoxalase;locus_tag=GCA000144955_01499;product=Glyoxalase;gene=gloA;Parent=GCA000144955_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_000413427.1,SO:0001217,UniParc:UPI00000D9E47,UniRef:UniRef100_A0A6B5EDA8,UniRef:UniRef50_A0A090M013,UniRef:UniRef90_A0A090M013
contig_1	Pyrodigal	gene	1585929	1586543	.	-	.	ID=GCA000144955_01500_gene;locus_tag=GCA000144955_01500
contig_1	Pyrodigal	CDS	1585929	1586543	.	-	0	ID=GCA000144955_01500;Name=CPBP family intramembrane metalloprotease;locus_tag=GCA000144955_01500;product=CPBP family intramembrane metalloprotease;Parent=GCA000144955_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_078055778.1,SO:0001217,UniParc:UPI0002F44ACA,UniRef:UniRef100_UPI0002F44ACA,UniRef:UniRef50_A0A2K4AGJ5,UniRef:UniRef90_A0A2K4AGJ5
contig_1	Pyrodigal	gene	1586518	1587843	.	-	.	ID=GCA000144955_01501_gene;locus_tag=GCA000144955_01501;gene=sagD
contig_1	Pyrodigal	CDS	1586518	1587843	.	-	0	ID=GCA000144955_01501;Name=Streptolysin associated protein SagD;locus_tag=GCA000144955_01501;product=Streptolysin associated protein SagD;gene=sagD;Parent=GCA000144955_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09136,RefSeq:WP_000627617.1,SO:0001217,UniParc:UPI0002F606DA,UniRef:UniRef100_UPI0002F606DA,UniRef:UniRef50_A0A853V6L5,UniRef:UniRef90_A0A853V6L5
contig_1	Pyrodigal	gene	1587830	1588759	.	-	.	ID=GCA000144955_01502_gene;locus_tag=GCA000144955_01502;gene=sagC
contig_1	Pyrodigal	CDS	1587830	1588759	.	-	0	ID=GCA000144955_01502;Name=Bacteriocin biosynthesis cyclodehydratase%2C SagC family;locus_tag=GCA000144955_01502;product=Bacteriocin biosynthesis cyclodehydratase%2C SagC family;gene=sagC;Parent=GCA000144955_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846702.1,SO:0001217,UniParc:UPI0001DDA089,UniRef:UniRef100_UPI001243BBE7,UniRef:UniRef50_A0AB33WCF3,UniRef:UniRef90_A0AB33WCF3
contig_1	Pyrodigal	gene	1588767	1589645	.	-	.	ID=GCA000144955_01503_gene;locus_tag=GCA000144955_01503
contig_1	Pyrodigal	CDS	1588767	1589645	.	-	0	ID=GCA000144955_01503;Name=Nitroreductase;locus_tag=GCA000144955_01503;product=Nitroreductase;Parent=GCA000144955_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000611635.1,SO:0001217,UniParc:UPI0001AE82F4,UniRef:UniRef100_A0AAN1ZMY1,UniRef:UniRef50_A0AAN1ZMY1,UniRef:UniRef90_A0AAN1ZMY1
contig_1	Pyrodigal	gene	1589642	1589935	.	-	.	ID=GCA000144955_01504_gene;locus_tag=GCA000144955_01504
contig_1	Pyrodigal	CDS	1589642	1589935	.	-	0	ID=GCA000144955_01504;Name=Membrane protein;locus_tag=GCA000144955_01504;product=Membrane protein;Parent=GCA000144955_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000919986.1,SO:0001217,UniParc:UPI0001DDA08A,UniRef:UniRef100_A0AAN1ZMW2,UniRef:UniRef50_A0A853V3D0,UniRef:UniRef90_A0AAN1ZMW2
contig_1	Pyrodigal	gene	1589947	1590681	.	-	.	ID=GCA000144955_01505_gene;locus_tag=GCA000144955_01505
contig_1	Pyrodigal	CDS	1589947	1590681	.	-	0	ID=GCA000144955_01505;Name=ABC transporter permease;locus_tag=GCA000144955_01505;product=ABC transporter permease;Parent=GCA000144955_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000608683.1,SO:0001217,UniParc:UPI0001DDA08B,UniRef:UniRef100_UPI0001DDA08B,UniRef:UniRef50_A0A853V518,UniRef:UniRef90_A0A853V518
contig_1	Pyrodigal	gene	1590678	1591541	.	-	.	ID=GCA000144955_01506_gene;locus_tag=GCA000144955_01506
contig_1	Pyrodigal	CDS	1590678	1591541	.	-	0	ID=GCA000144955_01506;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_01506;product=ABC transporter ATP-binding protein;Parent=GCA000144955_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000444788.1,SO:0001217,UniParc:UPI0001DDA08C,UniRef:UniRef100_UPI0001DDA08C,UniRef:UniRef50_A0AAN1ZMW6,UniRef:UniRef90_A0AAN1ZMW6
contig_1	Pyrodigal	gene	1592406	1593812	.	-	.	ID=GCA000144955_01507_gene;locus_tag=GCA000144955_01507;gene=gndA
contig_1	Pyrodigal	CDS	1592406	1593812	.	-	0	ID=GCA000144955_01507;Name=NADP-dependent phosphogluconate dehydrogenase;locus_tag=GCA000144955_01507;product=NADP-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0006098,GO:0016054,GO:0019521,GO:0050661;gene=gndA;Parent=GCA000144955_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0362,COG:G,KEGG:K00033,RefSeq:WP_000193707.1,SO:0001217,UniParc:UPI00000542F9,UniRef:UniRef100_Q5HFR2,UniRef:UniRef50_P00350,UniRef:UniRef90_Q931R3;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	1593880	1595013	.	-	.	ID=GCA000144955_01508_gene;locus_tag=GCA000144955_01508;gene=pepD2
contig_1	Pyrodigal	CDS	1593880	1595013	.	-	0	ID=GCA000144955_01508;Name=M20/M25/M40 family metallo-hydrolase;locus_tag=GCA000144955_01508;product=M20/M25/M40 family metallo-hydrolase;gene=pepD2;Parent=GCA000144955_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000606686.1,SO:0001217,UniParc:UPI0001DDA08D,UniRef:UniRef100_UPI0001DDA08D,UniRef:UniRef50_A0A380G6E1,UniRef:UniRef90_A0A0D6HL17;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	1595363	1595455	.	+	.	ID=GCA000144955_01509_gene;locus_tag=GCA000144955_01509;gene=prli42
contig_1	Pyrodigal	CDS	1595363	1595455	.	+	0	ID=GCA000144955_01509;Name=stressosome-associated protein Prli42;locus_tag=GCA000144955_01509;product=stressosome-associated protein Prli42;gene=prli42;Parent=GCA000144955_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001180311.1,SO:0001217,UniParc:UPI0001573141,UniRef:UniRef100_Q2FY58,UniRef:UniRef50_Q2FY58,UniRef:UniRef90_Q2FY58
contig_1	Pyrodigal	gene	1595582	1596562	.	-	.	ID=GCA000144955_01510_gene;locus_tag=GCA000144955_01510;gene=ygaE
contig_1	Pyrodigal	CDS	1595582	1596562	.	-	0	ID=GCA000144955_01510;Name=Putative membrane protein;locus_tag=GCA000144955_01510;product=Putative membrane protein;gene=ygaE;Parent=GCA000144955_01510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_000916190.1,SO:0001217,UniParc:UPI0001DDA08E,UniRef:UniRef100_UPI0001DDA08E,UniRef:UniRef50_Q49XV8,UniRef:UniRef90_A0A7U7JUT7
contig_1	Pyrodigal	gene	1596576	1597013	.	-	.	ID=GCA000144955_01511_gene;locus_tag=GCA000144955_01511
contig_1	Pyrodigal	CDS	1596576	1597013	.	-	0	ID=GCA000144955_01511;Name=Bacilliredoxin SAR1592;locus_tag=GCA000144955_01511;product=Bacilliredoxin SAR1592;Dbxref=GO:0045454;Parent=GCA000144955_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000367419.1,SO:0001217,UniParc:UPI00000D76F9,UniRef:UniRef100_Q2FY55,UniRef:UniRef50_Q2FY55,UniRef:UniRef90_Q2FY55
contig_1	Pyrodigal	gene	1597365	1598639	.	-	.	ID=GCA000144955_01512_gene;locus_tag=GCA000144955_01512;gene=aceF
contig_1	Pyrodigal	CDS	1597365	1598639	.	-	0	ID=GCA000144955_01512;Name=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000144955_01512;product=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;gene=aceF;Parent=GCA000144955_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000406834.1,SO:0001217,UniParc:UPI0001DDA08F,UniRef:UniRef100_UPI0001DDA08F,UniRef:UniRef50_P37942,UniRef:UniRef90_A0A0U1MLL2
contig_1	Pyrodigal	gene	1598652	1599635	.	-	.	ID=GCA000144955_01513_gene;locus_tag=GCA000144955_01513;gene=acoB
contig_1	Pyrodigal	CDS	1598652	1599635	.	-	0	ID=GCA000144955_01513;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000144955_01513;product=Pyruvate dehydrogenase E1 component subunit beta;gene=acoB;Parent=GCA000144955_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_001096637.1,SO:0001217,UniParc:UPI000175BEEF,UniRef:UniRef100_A0A0D1FJU3,UniRef:UniRef50_P37941,UniRef:UniRef90_Q2FY53
contig_1	Pyrodigal	gene	1599635	1600627	.	-	.	ID=GCA000144955_01514_gene;locus_tag=GCA000144955_01514;gene=acoA
contig_1	Pyrodigal	CDS	1599635	1600627	.	-	0	ID=GCA000144955_01514;Name=2-oxoisovalerate dehydrogenase subunit alpha;locus_tag=GCA000144955_01514;product=2-oxoisovalerate dehydrogenase subunit alpha;gene=acoA;Parent=GCA000144955_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000568355.1,SO:0001217,UniParc:UPI0001C0BE04,UniRef:UniRef100_A0A2S6D5D8,UniRef:UniRef50_A0A085UCJ1,UniRef:UniRef90_A0A2Y2J981
contig_1	Pyrodigal	gene	1600643	1602064	.	-	.	ID=GCA000144955_01515_gene;locus_tag=GCA000144955_01515;gene=lpdA
contig_1	Pyrodigal	CDS	1600643	1602064	.	-	0	ID=GCA000144955_01515;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000144955_01515;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0050660;gene=lpdA;Parent=GCA000144955_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_001291531.1,SO:0001217,UniParc:UPI0001DDA090,UniRef:UniRef100_UPI0001DDA090,UniRef:UniRef50_A0A0U1MLM9,UniRef:UniRef90_A0A0U1MLM9;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1602215	1603894	.	-	.	ID=GCA000144955_01516_gene;locus_tag=GCA000144955_01516;gene=recN
contig_1	Pyrodigal	CDS	1602215	1603894	.	-	0	ID=GCA000144955_01516;Name=DNA repair protein RecN;locus_tag=GCA000144955_01516;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006310;gene=recN;Parent=GCA000144955_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_000942203.1,SO:0001217,UniParc:UPI0001DDA091,UniRef:UniRef100_A0A6B5CDQ2,UniRef:UniRef50_B9E6Q3,UniRef:UniRef90_A0A0D3Q7N8
contig_1	Pyrodigal	gene	1603910	1604362	.	-	.	ID=GCA000144955_01517_gene;locus_tag=GCA000144955_01517;gene=ahrC
contig_1	Pyrodigal	CDS	1603910	1604362	.	-	0	ID=GCA000144955_01517;Name=transcriptional regulator AhrC/ArgR;locus_tag=GCA000144955_01517;product=transcriptional regulator AhrC/ArgR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=ahrC;Parent=GCA000144955_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_001124985.1,SO:0001217,UniParc:UPI00000D783E,UniRef:UniRef100_Q2FY49,UniRef:UniRef50_P17893,UniRef:UniRef90_Q2FY49
contig_1	Pyrodigal	gene	1604793	1605674	.	-	.	ID=GCA000144955_01518_gene;locus_tag=GCA000144955_01518;gene=ispA
contig_1	Pyrodigal	CDS	1604793	1605674	.	-	0	ID=GCA000144955_01518;Name=Geranyltranstransferase%2C putative;locus_tag=GCA000144955_01518;product=Geranyltranstransferase%2C putative;gene=ispA;Parent=GCA000144955_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_000183370.1,SO:0001217,UniParc:UPI0002D5B218,UniRef:UniRef100_UPI0002D5B218,UniRef:UniRef50_A0A4U9TB05,UniRef:UniRef90_Q2FY48
contig_1	Pyrodigal	gene	1605652	1605882	.	-	.	ID=GCA000144955_01519_gene;locus_tag=GCA000144955_01519;gene=xseB
contig_1	Pyrodigal	CDS	1605652	1605882	.	-	0	ID=GCA000144955_01519;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000144955_01519;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000144955_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_000159865.1,SO:0001217,UniParc:UPI00000542EA,UniRef:UniRef100_Q2FY47,UniRef:UniRef50_Q2FY47,UniRef:UniRef90_Q2FY47;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1605875	1607212	.	-	.	ID=GCA000144955_01520_gene;locus_tag=GCA000144955_01520;gene=xseA
contig_1	Pyrodigal	CDS	1605875	1607212	.	-	0	ID=GCA000144955_01520;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000144955_01520;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA000144955_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_001286926.1,SO:0001217,UniParc:UPI0001DDA093,UniRef:UniRef100_UPI0001DDA093,UniRef:UniRef50_Q2FY46,UniRef:UniRef90_Q2FY46;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1607229	1607618	.	-	.	ID=GCA000144955_01521_gene;locus_tag=GCA000144955_01521;gene=nusB
contig_1	Pyrodigal	CDS	1607229	1607618	.	-	0	ID=GCA000144955_01521;Name=transcription antitermination factor NusB;locus_tag=GCA000144955_01521;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000144955_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_000087385.1,SO:0001217,UniParc:UPI0000130A67,UniRef:UniRef100_Q2FY45,UniRef:UniRef50_Q2FY45,UniRef:UniRef90_Q2FY45
contig_1	Pyrodigal	gene	1607678	1608040	.	-	.	ID=GCA000144955_01522_gene;locus_tag=GCA000144955_01522;gene=yloU
contig_1	Pyrodigal	CDS	1607678	1608040	.	-	0	ID=GCA000144955_01522;Name=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;locus_tag=GCA000144955_01522;product=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;gene=yloU;Parent=GCA000144955_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000241588.1,SO:0001217,UniParc:UPI00000542E7,UniRef:UniRef100_Q2FY44,UniRef:UniRef50_A0A853V4U3,UniRef:UniRef90_Q2FY44
contig_1	Pyrodigal	gene	1608055	1609410	.	-	.	ID=GCA000144955_01523_gene;locus_tag=GCA000144955_01523;gene=accC
contig_1	Pyrodigal	CDS	1608055	1609410	.	-	0	ID=GCA000144955_01523;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000144955_01523;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0004075,GO:0009317,GO:0016874;gene=accC;Parent=GCA000144955_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4770,COG:I,RefSeq:WP_000756617.1,SO:0001217,UniParc:UPI0001DDA094,UniRef:UniRef100_UPI0001DDA094,UniRef:UniRef50_A0A0U1E6Z3,UniRef:UniRef90_A0A0Y9APZ0;ec_number=6.3.4.14
contig_1	Pyrodigal	gene	1609410	1609874	.	-	.	ID=GCA000144955_01524_gene;locus_tag=GCA000144955_01524;gene=accB
contig_1	Pyrodigal	CDS	1609410	1609874	.	-	0	ID=GCA000144955_01524;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA000144955_01524;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA000144955_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001009514.1,SO:0001217,UniParc:UPI0001DDA095,UniRef:UniRef100_UPI0001DDA095,UniRef:UniRef50_A0A090LU16,UniRef:UniRef90_A0A090LU16;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1610348	1610905	.	-	.	ID=GCA000144955_01525_gene;locus_tag=GCA000144955_01525;gene=efp
contig_1	Pyrodigal	CDS	1610348	1610905	.	-	0	ID=GCA000144955_01525;Name=elongation factor P;locus_tag=GCA000144955_01525;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA000144955_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_000626504.1,SO:0001217,UniParc:UPI00000542E4,UniRef:UniRef100_Q2FY41,UniRef:UniRef50_Q2FY41,UniRef:UniRef90_Q2FY41
contig_1	Pyrodigal	gene	1610931	1611992	.	-	.	ID=GCA000144955_01526_gene;locus_tag=GCA000144955_01526;gene=pepP
contig_1	Pyrodigal	CDS	1610931	1611992	.	-	0	ID=GCA000144955_01526;Name=Aminopeptidase P family protein;locus_tag=GCA000144955_01526;product=Aminopeptidase P family protein;gene=pepP;Parent=GCA000144955_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_000087113.1,SO:0001217,UniParc:UPI0001DDA096,UniRef:UniRef100_UPI0001DDA096,UniRef:UniRef50_A0A0D6XTL2,UniRef:UniRef90_A0A2K4AGC7;ec_number=3.4.11.9
contig_1	Pyrodigal	gene	1612097	1612678	.	+	.	ID=GCA000144955_01527_gene;locus_tag=GCA000144955_01527
contig_1	Pyrodigal	CDS	1612097	1612678	.	+	0	ID=GCA000144955_01527;Name=Lipoprotein;locus_tag=GCA000144955_01527;product=Lipoprotein;Parent=GCA000144955_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000737686.1,SO:0001217,UniParc:UPI00000542E2,UniRef:UniRef100_Q2FY39,UniRef:UniRef50_A0A1J3ZXK3,UniRef:UniRef90_Q2FY39
contig_1	Pyrodigal	gene	1612692	1612910	.	+	.	ID=GCA000144955_01528_gene;locus_tag=GCA000144955_01528
contig_1	Pyrodigal	CDS	1612692	1612910	.	+	0	ID=GCA000144955_01528;Name=hypothetical protein;locus_tag=GCA000144955_01528;product=hypothetical protein;Parent=GCA000144955_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001244301.1,SO:0001217,UniParc:UPI00000D9E4F,UniRef:UniRef100_A0A0E1XFI2,UniRef:UniRef50_Q2FY38,UniRef:UniRef90_Q2FY38
contig_1	Pyrodigal	gene	1612974	1613804	.	-	.	ID=GCA000144955_01529_gene;locus_tag=GCA000144955_01529;gene=lipM
contig_1	Pyrodigal	CDS	1612974	1613804	.	-	0	ID=GCA000144955_01529;Name=Octanoyltransferase LipM;locus_tag=GCA000144955_01529;product=Octanoyltransferase LipM;Dbxref=GO:0009107,GO:0033819;gene=lipM;Parent=GCA000144955_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,RefSeq:WP_000141109.1,SO:0001217,UniParc:UPI00000CAB02,UniRef:UniRef100_Q2FY37,UniRef:UniRef50_P54511,UniRef:UniRef90_Q2FY37;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	1613962	1614348	.	+	.	ID=GCA000144955_01530_gene;locus_tag=GCA000144955_01530;gene=pspE
contig_1	Pyrodigal	CDS	1613962	1614348	.	+	0	ID=GCA000144955_01530;Name=Rhodanese domain-containing protein;locus_tag=GCA000144955_01530;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000144955_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_001276571.1,SO:0001217,UniParc:UPI00000542DF,UniRef:UniRef100_Q2FY36,UniRef:UniRef50_Q2FY36,UniRef:UniRef90_Q2FY36
contig_1	Pyrodigal	gene	1614711	1616183	.	-	.	ID=GCA000144955_01531_gene;locus_tag=GCA000144955_01531;gene=gcvPB
contig_1	Pyrodigal	CDS	1614711	1616183	.	-	0	ID=GCA000144955_01531;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;locus_tag=GCA000144955_01531;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;Dbxref=GO:0004375,GO:0005829,GO:0005960,GO:0006546,GO:0016594,GO:0019464,GO:0030170;gene=gcvPB;Parent=GCA000144955_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1003,COG:E,RefSeq:WP_000202177.1,SO:0001217,UniParc:UPI0001C0BE09,UniRef:UniRef100_A0A2S6D0Z6,UniRef:UniRef50_P54377,UniRef:UniRef90_Q2FY35;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1616176	1617522	.	-	.	ID=GCA000144955_01532_gene;locus_tag=GCA000144955_01532;gene=gcvPA
contig_1	Pyrodigal	CDS	1616176	1617522	.	-	0	ID=GCA000144955_01532;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;locus_tag=GCA000144955_01532;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;Dbxref=GO:0004375,GO:0006546,GO:0009116,GO:0019464;gene=gcvPA;Parent=GCA000144955_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0403,COG:E,RefSeq:WP_000019682.1,SO:0001217,UniParc:UPI0001DDA097,UniRef:UniRef100_UPI0001DDA097,UniRef:UniRef50_Q81M07,UniRef:UniRef90_Q2FY34;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1617542	1618633	.	-	.	ID=GCA000144955_01533_gene;locus_tag=GCA000144955_01533;gene=gcvT
contig_1	Pyrodigal	CDS	1617542	1618633	.	-	0	ID=GCA000144955_01533;Name=glycine cleavage system aminomethyltransferase GcvT;locus_tag=GCA000144955_01533;product=glycine cleavage system aminomethyltransferase GcvT;Dbxref=GO:0004047,GO:0005737,GO:0005829,GO:0005960,GO:0008483,GO:0019464;gene=gcvT;Parent=GCA000144955_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0404,COG:E,RefSeq:WP_000093352.1,SO:0001217,UniParc:UPI0001DDA098,UniRef:UniRef100_UPI0001DDA098,UniRef:UniRef50_Q2FY33,UniRef:UniRef90_Q2FY33;ec_number=2.1.2.10
contig_1	Infernal	regulatory_region	1618708	1618805	7.2e-12	-	.	ID=BPGLLONNDN_176;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1618792	1619316	.	-	.	ID=GCA000144955_01534_gene;locus_tag=GCA000144955_01534;gene=aroK
contig_1	Pyrodigal	CDS	1618792	1619316	.	-	0	ID=GCA000144955_01534;Name=Shikimate kinase;locus_tag=GCA000144955_01534;product=Shikimate kinase;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroK;Parent=GCA000144955_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_001015120.1,SO:0001217,UniParc:UPI00000CA986,UniRef:UniRef100_P63605,UniRef:UniRef50_Q2FY32,UniRef:UniRef90_Q2FY32;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	1619549	1619923	.	-	.	ID=GCA000144955_01535_gene;locus_tag=GCA000144955_01535
contig_1	Pyrodigal	CDS	1619549	1619923	.	-	0	ID=GCA000144955_01535;Name=competence type IV pilus minor pilin ComGF;locus_tag=GCA000144955_01535;product=competence type IV pilus minor pilin ComGF;Parent=GCA000144955_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0009926C89,UniRef:UniRef90_UPI00301BAC20
contig_1	Pyrodigal	gene	1619964	1620263	.	-	.	ID=GCA000144955_01536_gene;locus_tag=GCA000144955_01536
contig_1	Pyrodigal	CDS	1619964	1620263	.	-	0	ID=GCA000144955_01536;Name=Competence protein ComGE;locus_tag=GCA000144955_01536;product=Competence protein ComGE;Parent=GCA000144955_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000844413.1,SO:0001217,UniParc:UPI00000542D8,UniRef:UniRef100_Q2G2I8,UniRef:UniRef50_A0A2K4AGD7,UniRef:UniRef90_Q2G2I8
contig_1	Pyrodigal	gene	1620250	1620684	.	-	.	ID=GCA000144955_01537_gene;locus_tag=GCA000144955_01537;gene=comGD
contig_1	Pyrodigal	CDS	1620250	1620684	.	-	0	ID=GCA000144955_01537;Name=competence type IV pilus minor pilin ComGD;locus_tag=GCA000144955_01537;product=competence type IV pilus minor pilin ComGD;gene=comGD;Parent=GCA000144955_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,SO:0001217,UniRef:UniRef50_Q2G2I7,UniRef:UniRef90_Q2G2I7
contig_1	Pyrodigal	gene	1620674	1620985	.	-	.	ID=GCA000144955_01538_gene;locus_tag=GCA000144955_01538;gene=comGC
contig_1	Pyrodigal	CDS	1620674	1620985	.	-	0	ID=GCA000144955_01538;Name=competence type IV pilus major pilin ComGC;locus_tag=GCA000144955_01538;product=competence type IV pilus major pilin ComGC;Dbxref=GO:0030420;gene=comGC;Parent=GCA000144955_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4537,COG:X,RefSeq:WP_000472256.1,SO:0001217,UniParc:UPI00000542D4,UniRef:UniRef100_Q2G2J0,UniRef:UniRef50_A0A380G8S0,UniRef:UniRef90_A0A0U1MLR1
contig_1	Pyrodigal	gene	1620999	1622069	.	-	.	ID=GCA000144955_01539_gene;locus_tag=GCA000144955_01539;gene=comGB
contig_1	Pyrodigal	CDS	1620999	1622069	.	-	0	ID=GCA000144955_01539;Name=competence type IV pilus assembly protein ComGB;locus_tag=GCA000144955_01539;product=competence type IV pilus assembly protein ComGB;gene=comGB;Parent=GCA000144955_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1459,COG:NU,RefSeq:WP_000776405.1,SO:0001217,UniParc:UPI0001DDA238,UniRef:UniRef100_A0AAW9XD41,UniRef:UniRef50_Q2G2I6,UniRef:UniRef90_Q2G2I6
contig_1	Pyrodigal	gene	1622041	1623015	.	-	.	ID=GCA000144955_01540_gene;locus_tag=GCA000144955_01540;gene=comGA
contig_1	Pyrodigal	CDS	1622041	1623015	.	-	0	ID=GCA000144955_01540;Name=competence type IV pilus ATPase ComGA;locus_tag=GCA000144955_01540;product=competence type IV pilus ATPase ComGA;gene=comGA;Parent=GCA000144955_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2804,COG:NU,RefSeq:WP_000697229.1,SO:0001217,UniParc:UPI00005FE52C,UniRef:UniRef100_UPI00005FE52C,UniRef:UniRef50_Q2FY30,UniRef:UniRef90_Q2FY30
contig_1	Pyrodigal	gene	1623067	1623690	.	-	.	ID=GCA000144955_01541_gene;locus_tag=GCA000144955_01541;gene=gloB
contig_1	Pyrodigal	CDS	1623067	1623690	.	-	0	ID=GCA000144955_01541;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000144955_01541;product=Metallo-beta-lactamase domain-containing protein;gene=gloB;Parent=GCA000144955_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_001223005.1,SO:0001217,UniParc:UPI0001DDA239,UniRef:UniRef100_UPI0001DDA239,UniRef:UniRef50_Q2FY29,UniRef:UniRef90_Q2FY29
contig_1	Pyrodigal	gene	1623687	1624016	.	-	.	ID=GCA000144955_01542_gene;locus_tag=GCA000144955_01542;gene=yqgV
contig_1	Pyrodigal	CDS	1623687	1624016	.	-	0	ID=GCA000144955_01542;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000144955_01542;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000144955_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_001018871.1,SO:0001217,UniParc:UPI00000542D0,UniRef:UniRef100_Q2FY28,UniRef:UniRef50_Q56200,UniRef:UniRef90_A0A7U7JUV1
contig_1	Pyrodigal	gene	1624016	1625002	.	-	.	ID=GCA000144955_01543_gene;locus_tag=GCA000144955_01543;gene=nagC
contig_1	Pyrodigal	CDS	1624016	1625002	.	-	0	ID=GCA000144955_01543;Name=Glucokinase;locus_tag=GCA000144955_01543;product=Glucokinase;gene=nagC;Parent=GCA000144955_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000161306.1,SO:0001217,UniParc:UPI0001DDA23A,UniRef:UniRef100_UPI0001DDA23A,UniRef:UniRef50_Q56198,UniRef:UniRef90_A0A7U7JUV0
contig_1	Pyrodigal	gene	1625183	1626646	.	-	.	ID=GCA000144955_01544_gene;locus_tag=GCA000144955_01544;gene=glpG
contig_1	Pyrodigal	CDS	1625183	1626646	.	-	0	ID=GCA000144955_01544;Name=Membrane peptidase%2C contains TPR repeat domain;locus_tag=GCA000144955_01544;product=Membrane peptidase%2C contains TPR repeat domain;gene=glpG;Parent=GCA000144955_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,KEGG:K19225,RefSeq:WP_001017875.1,SO:0001217,UniParc:UPI0001DDA23B,UniRef:UniRef100_UPI0001DDA23B,UniRef:UniRef50_A0A4U9T9N5,UniRef:UniRef90_A0A6B5H1W4;ec_number=3.4.21.105
contig_1	Pyrodigal	gene	1626658	1627251	.	-	.	ID=GCA000144955_01545_gene;locus_tag=GCA000144955_01545;gene=fAU1
contig_1	Pyrodigal	CDS	1626658	1627251	.	-	0	ID=GCA000144955_01545;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000144955_01545;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0006730,GO:0030272;gene=fAU1;Parent=GCA000144955_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,SO:0001217,UniRef:UniRef50_Q2FY23,UniRef:UniRef90_Q2FY23;ec_number=6.3.3.2
contig_1	Pyrodigal	gene	1627406	1627555	.	-	.	ID=GCA000144955_01546_gene;locus_tag=GCA000144955_01546;gene=rpmG
contig_1	Pyrodigal	CDS	1627406	1627555	.	-	0	ID=GCA000144955_01546;Name=50S ribosomal protein L33;locus_tag=GCA000144955_01546;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000144955_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265709.1,SO:0001217,UniParc:UPI00000542C9,UniRef:UniRef100_Q2FY22,UniRef:UniRef50_Q5HNZ8,UniRef:UniRef90_Q5HNZ8
contig_1	Pyrodigal	gene	1627668	1629743	.	-	.	ID=GCA000144955_01547_gene;locus_tag=GCA000144955_01547;gene=ftsI
contig_1	Pyrodigal	CDS	1627668	1629743	.	-	0	ID=GCA000144955_01547;Name=Putative penicillin-binding protein;locus_tag=GCA000144955_01547;product=Putative penicillin-binding protein;gene=ftsI;Parent=GCA000144955_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K12553,RefSeq:WP_000919769.1,SO:0001217,UniParc:UPI00000CAAD1,UniRef:UniRef100_A0A0D1I954,UniRef:UniRef50_P83331,UniRef:UniRef90_P83331;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1629862	1630461	.	-	.	ID=GCA000144955_01548_gene;locus_tag=GCA000144955_01548;gene=sodA
contig_1	Pyrodigal	CDS	1629862	1630461	.	-	0	ID=GCA000144955_01548;Name=Superoxide dismutase [Mn/Fe] 1;locus_tag=GCA000144955_01548;product=Superoxide dismutase [Mn/Fe] 1;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodA;Parent=GCA000144955_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000863556.1,SO:0001217,UniParc:UPI00000542C7,UniRef:UniRef100_P0A0J3,UniRef:UniRef50_Q9K4V3,UniRef:UniRef90_P0A0J3;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1630737	1631147	.	-	.	ID=GCA000144955_01549_gene;locus_tag=GCA000144955_01549;gene=fur
contig_1	Pyrodigal	CDS	1630737	1631147	.	-	0	ID=GCA000144955_01549;Name=Ferric uptake regulation protein;locus_tag=GCA000144955_01549;product=Ferric uptake regulation protein;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=fur;Parent=GCA000144955_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,KEGG:K02076,RefSeq:WP_001095260.1,SO:0001217,UniParc:UPI00000542C6,UniRef:UniRef100_Q2FY19,UniRef:UniRef50_Q2FY19,UniRef:UniRef90_Q2FY19
contig_1	Pyrodigal	gene	1631134	1632006	.	-	.	ID=GCA000144955_01550_gene;locus_tag=GCA000144955_01550;gene=znuB
contig_1	Pyrodigal	CDS	1631134	1632006	.	-	0	ID=GCA000144955_01550;Name=Metal ABC transporter permease;locus_tag=GCA000144955_01550;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000144955_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,SO:0001217,UniRef:UniRef50_Q2FY18,UniRef:UniRef90_Q2FY18
contig_1	Pyrodigal	gene	1632039	1632824	.	-	.	ID=GCA000144955_01551_gene;locus_tag=GCA000144955_01551;gene=znuC
contig_1	Pyrodigal	CDS	1632039	1632824	.	-	0	ID=GCA000144955_01551;Name=ABC transporter%2C putative;locus_tag=GCA000144955_01551;product=ABC transporter%2C putative;gene=znuC;Parent=GCA000144955_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_001213908.1,SO:0001217,UniParc:UPI00000542C4,UniRef:UniRef100_Q2FY17,UniRef:UniRef50_A0A1W7AC50,UniRef:UniRef90_Q2FY17
contig_1	Pyrodigal	gene	1632950	1633840	.	-	.	ID=GCA000144955_01552_gene;locus_tag=GCA000144955_01552;gene=nfo
contig_1	Pyrodigal	CDS	1632950	1633840	.	-	0	ID=GCA000144955_01552;Name=deoxyribonuclease IV;locus_tag=GCA000144955_01552;product=deoxyribonuclease IV;Dbxref=GO:0003677,GO:0003906,GO:0006281,GO:0006284,GO:0008081,GO:0008270,GO:0008833;gene=nfo;Parent=GCA000144955_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0648,COG:L,RefSeq:WP_000924214.1,SO:0001217,UniParc:UPI00004B5C13,UniRef:UniRef100_Q2FY16,UniRef:UniRef50_Q2FY16,UniRef:UniRef90_Q2FY16;ec_number=3.1.21.2
contig_1	Pyrodigal	gene	1633850	1635196	.	-	.	ID=GCA000144955_01553_gene;locus_tag=GCA000144955_01553;gene=cshB
contig_1	Pyrodigal	CDS	1633850	1635196	.	-	0	ID=GCA000144955_01553;Name=DEAD-box ATP-dependent RNA helicase CshB;locus_tag=GCA000144955_01553;product=DEAD-box ATP-dependent RNA helicase CshB;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0009409,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshB;Parent=GCA000144955_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001062177.1,SO:0001217,UniParc:UPI00000D9E59,UniRef:UniRef100_A0A0D1HKC3,UniRef:UniRef50_Q2FY15,UniRef:UniRef90_Q2FY15;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1635310	1636410	.	-	.	ID=GCA000144955_01554_gene;locus_tag=GCA000144955_01554;gene=nIF3
contig_1	Pyrodigal	CDS	1635310	1636410	.	-	0	ID=GCA000144955_01554;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA000144955_01554;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0046872,GO:0051540;gene=nIF3;Parent=GCA000144955_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0327,COG:H,KEGG:K22391,RefSeq:WP_000683911.1,SO:0001217,UniParc:UPI0001DDA23E,UniRef:UniRef100_UPI0001DDA23E,UniRef:UniRef50_P67272,UniRef:UniRef90_P67272;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	1636413	1637090	.	-	.	ID=GCA000144955_01555_gene;locus_tag=GCA000144955_01555;gene=trmK
contig_1	Pyrodigal	CDS	1636413	1637090	.	-	0	ID=GCA000144955_01555;Name=tRNA-m1A22 methylase;locus_tag=GCA000144955_01555;product=tRNA-m1A22 methylase;gene=trmK;Parent=GCA000144955_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2384,COG:J,KEGG:K06967,RefSeq:WP_000624566.1,SO:0001217,UniParc:UPI0001DDA23F,UniRef:UniRef100_UPI0001DDA23F,UniRef:UniRef50_A0A239Z5U5,UniRef:UniRef90_A0A2X2M890;ec_number=2.1.1.217
contig_1	Pyrodigal	gene	1637221	1638327	.	-	.	ID=GCA000144955_01556_gene;locus_tag=GCA000144955_01556;gene=rpoD
contig_1	Pyrodigal	CDS	1637221	1638327	.	-	0	ID=GCA000144955_01556;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA000144955_01556;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0003677,GO:0005737,GO:0006352,GO:0006355,GO:0016987;gene=rpoD;Parent=GCA000144955_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03086,RefSeq:WP_001283055.1,SO:0001217,UniParc:UPI00000542BF,UniRef:UniRef100_P0A0J0,UniRef:UniRef50_P0A0J0,UniRef:UniRef90_P0A0J0
contig_1	Pyrodigal	gene	1638551	1640350	.	-	.	ID=GCA000144955_01557_gene;locus_tag=GCA000144955_01557;gene=dnaG
contig_1	Pyrodigal	CDS	1638551	1640350	.	-	0	ID=GCA000144955_01557;Name=DNA primase;locus_tag=GCA000144955_01557;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003678,GO:0003896,GO:0005524,GO:0005737,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000144955_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_001217259.1,SO:0001217,UniParc:UPI0001DDA240,UniRef:UniRef100_UPI0001DDA240,UniRef:UniRef50_O05338,UniRef:UniRef90_O05338;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	1640411	1641229	.	-	.	ID=GCA000144955_01558_gene;locus_tag=GCA000144955_01558;gene=ppsR
contig_1	Pyrodigal	CDS	1640411	1641229	.	-	0	ID=GCA000144955_01558;Name=Putative pyruvate%2C phosphate dikinase regulatory protein;locus_tag=GCA000144955_01558;product=Putative pyruvate%2C phosphate dikinase regulatory protein;Dbxref=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gene=ppsR;Parent=GCA000144955_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1806,COG:T,RefSeq:WP_000411298.1,SO:0001217,UniParc:UPI00000D786D,UniRef:UniRef100_P67199,UniRef:UniRef50_Q2FY10,UniRef:UniRef90_Q2FY10;ec_number=2.7.4.27
contig_1	Pyrodigal	gene	1641240	1641779	.	-	.	ID=GCA000144955_01559_gene;locus_tag=GCA000144955_01559;gene=glpR
contig_1	Pyrodigal	CDS	1641240	1641779	.	-	0	ID=GCA000144955_01559;Name=CBS domain-containing protein;locus_tag=GCA000144955_01559;product=CBS domain-containing protein;gene=glpR;Parent=GCA000144955_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,SO:0001217,UniRef:UniRef50_O34994,UniRef:UniRef90_A0A7U7JV00
contig_1	Pyrodigal	gene	1642198	1643589	.	+	.	ID=GCA000144955_01560_gene;locus_tag=GCA000144955_01560;gene=glyQS
contig_1	Pyrodigal	CDS	1642198	1643589	.	+	0	ID=GCA000144955_01560;Name=glycine--tRNA ligase;locus_tag=GCA000144955_01560;product=glycine--tRNA ligase;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005737,GO:0006426,GO:0016740,GO:0046983;gene=glyQS;Parent=GCA000144955_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0423,COG:J,KEGG:K01880,RefSeq:WP_001030080.1,SO:0001217,UniParc:UPI000002E8EC,UniRef:UniRef100_Q2FY08,UniRef:UniRef50_Q2FY08,UniRef:UniRef90_Q2FY08;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	1643740	1644486	.	-	.	ID=GCA000144955_01561_gene;locus_tag=GCA000144955_01561;gene=recO
contig_1	Pyrodigal	CDS	1643740	1644486	.	-	0	ID=GCA000144955_01561;Name=DNA repair protein RecO;locus_tag=GCA000144955_01561;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000144955_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,RefSeq:WP_078055833.1,SO:0001217,UniParc:UPI0002DC14C8,UniRef:UniRef100_UPI0002DC14C8,UniRef:UniRef50_Q49Y09,UniRef:UniRef90_Q2FGF7
contig_1	Pyrodigal	gene	1644514	1645413	.	-	.	ID=GCA000144955_01562_gene;locus_tag=GCA000144955_01562;gene=era
contig_1	Pyrodigal	CDS	1644514	1645413	.	-	0	ID=GCA000144955_01562;Name=GTPase Era;locus_tag=GCA000144955_01562;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181;gene=era;Parent=GCA000144955_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000134765.1,SO:0001217,UniParc:UPI000012A100,UniRef:UniRef100_Q2FGF6,UniRef:UniRef50_P42182,UniRef:UniRef90_Q2FY06
contig_1	Pyrodigal	gene	1645414	1645818	.	-	.	ID=GCA000144955_01563_gene;locus_tag=GCA000144955_01563;gene=cdd
contig_1	Pyrodigal	CDS	1645414	1645818	.	-	0	ID=GCA000144955_01563;Name=cytidine deaminase;locus_tag=GCA000144955_01563;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005737,GO:0008270,GO:0008655,GO:0009972;gene=cdd;Parent=GCA000144955_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,KEGG:K01489,RefSeq:WP_000121871.1,SO:0001217,UniParc:UPI00003B170C,UniRef:UniRef100_A0A7Z7W1X2,UniRef:UniRef50_A0A1W7AC49,UniRef:UniRef90_A0A2K4AGX2;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	1645829	1646173	.	-	.	ID=GCA000144955_01564_gene;locus_tag=GCA000144955_01564;gene=ybeY
contig_1	Pyrodigal	CDS	1645829	1646173	.	-	0	ID=GCA000144955_01564;Name=rRNA maturation RNase YbeY;locus_tag=GCA000144955_01564;product=rRNA maturation RNase YbeY;Dbxref=GO:0004540,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000144955_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0818,COG:I,RefSeq:WP_000819532.1,SO:0001217,UniParc:UPI00000542B7,UniRef:UniRef100_Q2FY03,UniRef:UniRef50_Q2FY03,UniRef:UniRef90_Q2FY03
contig_1	Pyrodigal	gene	1646176	1646643	.	-	.	ID=GCA000144955_01565_gene;locus_tag=GCA000144955_01565;gene=ybeY
contig_1	Pyrodigal	CDS	1646176	1646643	.	-	0	ID=GCA000144955_01565;Name=rRNA maturation RNase YbeY;locus_tag=GCA000144955_01565;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000144955_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_000494139.1,SO:0001217,UniParc:UPI0001DDA243,UniRef:UniRef100_UPI0001DDA243,UniRef:UniRef50_Q2FY02,UniRef:UniRef90_Q2FY02;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1646644	1647591	.	-	.	ID=GCA000144955_01566_gene;locus_tag=GCA000144955_01566;gene=phoH
contig_1	Pyrodigal	CDS	1646644	1647591	.	-	0	ID=GCA000144955_01566;Name=PhoH-like protein;locus_tag=GCA000144955_01566;product=PhoH-like protein;gene=phoH;Parent=GCA000144955_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1702,COG:T,KEGG:K06217,RefSeq:WP_001117764.1,SO:0001217,UniParc:UPI0001DDA244,UniRef:UniRef100_UPI0001DDA244,UniRef:UniRef50_A0A174T1P7,UniRef:UniRef90_A0A115CVC0
contig_1	Pyrodigal	gene	1647895	1648593	.	-	.	ID=GCA000144955_01567_gene;locus_tag=GCA000144955_01567
contig_1	Pyrodigal	CDS	1647895	1648593	.	-	0	ID=GCA000144955_01567;Name=Iron transporter;locus_tag=GCA000144955_01567;product=Iron transporter;Parent=GCA000144955_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110603.1,SO:0001217,UniParc:UPI00000542B4,UniRef:UniRef100_Q2FY00,UniRef:UniRef50_Q2FY00,UniRef:UniRef90_Q2FY00
contig_1	Pyrodigal	gene	1648610	1649599	.	-	.	ID=GCA000144955_01568_gene;locus_tag=GCA000144955_01568;gene=floA
contig_1	Pyrodigal	CDS	1648610	1649599	.	-	0	ID=GCA000144955_01568;Name=flotillin-like protein FloA;locus_tag=GCA000144955_01568;product=flotillin-like protein FloA;Dbxref=GO:0005886,GO:0045121;gene=floA;Parent=GCA000144955_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4864,COG:M,RefSeq:WP_000492113.1,SO:0001217,UniParc:UPI0001DDA245,UniRef:UniRef100_UPI0001DDA245,UniRef:UniRef50_P54466,UniRef:UniRef90_Q49Y16
contig_1	Pyrodigal	gene	1649617	1650324	.	-	.	ID=GCA000144955_01569_gene;locus_tag=GCA000144955_01569;gene=nfeD
contig_1	Pyrodigal	CDS	1649617	1650324	.	-	0	ID=GCA000144955_01569;Name=NfeD-like C-terminal domain-containing protein;locus_tag=GCA000144955_01569;product=NfeD-like C-terminal domain-containing protein;gene=nfeD;Parent=GCA000144955_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1030,COG:O,SO:0001217,UniRef:UniRef50_Q2FXZ8,UniRef:UniRef90_Q2FXZ8
contig_1	Pyrodigal	gene	1650544	1650720	.	-	.	ID=GCA000144955_01570_gene;locus_tag=GCA000144955_01570;gene=rpsU
contig_1	Pyrodigal	CDS	1650544	1650720	.	-	0	ID=GCA000144955_01570;Name=30S ribosomal protein S21;locus_tag=GCA000144955_01570;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA000144955_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_000048060.1,SO:0001217,UniParc:UPI000004802C,UniRef:UniRef100_Q2FXZ7,UniRef:UniRef50_Q5M3E1,UniRef:UniRef90_Q2FXZ7
contig_1	Pyrodigal	gene	1651013	1652359	.	-	.	ID=GCA000144955_01571_gene;locus_tag=GCA000144955_01571;gene=mtaB
contig_1	Pyrodigal	CDS	1651013	1652359	.	-	0	ID=GCA000144955_01571;Name=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;locus_tag=GCA000144955_01571;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;Dbxref=GO:0006400,GO:0051539,GO:0061712,GO:1904047;gene=mtaB;Parent=GCA000144955_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K18707,RefSeq:WP_000108669.1,SO:0001217,UniParc:UPI0001DDA247,UniRef:UniRef100_UPI0001DDA247,UniRef:UniRef50_P54462,UniRef:UniRef90_A0A077URN1;ec_number=2.8.4.5
contig_1	Pyrodigal	gene	1652366	1653118	.	-	.	ID=GCA000144955_01572_gene;locus_tag=GCA000144955_01572;gene=rsmE
contig_1	Pyrodigal	CDS	1652366	1653118	.	-	0	ID=GCA000144955_01572;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000144955_01572;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0006364,GO:0008168;gene=rsmE;Parent=GCA000144955_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_001190132.1,SO:0001217,UniParc:UPI0001DDA248,UniRef:UniRef100_UPI0001DDA248,UniRef:UniRef50_A0A122ER25,UniRef:UniRef90_A0A122ER25;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	1653120	1654058	.	-	.	ID=GCA000144955_01573_gene;locus_tag=GCA000144955_01573;gene=prmA
contig_1	Pyrodigal	CDS	1653120	1654058	.	-	0	ID=GCA000144955_01573;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA000144955_01573;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0005737,GO:0008757,GO:0032259,GO:0036211,GO:0042054;gene=prmA;Parent=GCA000144955_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2264,COG:J,RefSeq:WP_001104614.1,SO:0001217,UniParc:UPI0001B3AD8F,UniRef:UniRef100_A0A0U1MM03,UniRef:UniRef50_Q2FXZ4,UniRef:UniRef90_Q2FXZ4;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1654062	1655201	.	-	.	ID=GCA000144955_01574_gene;locus_tag=GCA000144955_01574;gene=dnaJ
contig_1	Pyrodigal	CDS	1654062	1655201	.	-	0	ID=GCA000144955_01574;Name=molecular chaperone DnaJ;locus_tag=GCA000144955_01574;product=molecular chaperone DnaJ;Dbxref=GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000144955_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_001119021.1,SO:0001217,UniParc:UPI00000D7685,UniRef:UniRef100_Q2FXZ3,UniRef:UniRef50_P95830,UniRef:UniRef90_Q2FXZ3
contig_1	Pyrodigal	gene	1655337	1657169	.	-	.	ID=GCA000144955_01575_gene;locus_tag=GCA000144955_01575;gene=dnaK
contig_1	Pyrodigal	CDS	1655337	1657169	.	-	0	ID=GCA000144955_01575;Name=molecular chaperone DnaK;locus_tag=GCA000144955_01575;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=dnaK;Parent=GCA000144955_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_000034716.1,SO:0001217,UniParc:UPI0000129601,UniRef:UniRef100_Q2FXZ2,UniRef:UniRef50_P17820,UniRef:UniRef90_Q2FXZ2
contig_1	Pyrodigal	gene	1657238	1657864	.	-	.	ID=GCA000144955_01576_gene;locus_tag=GCA000144955_01576;gene=grpE
contig_1	Pyrodigal	CDS	1657238	1657864	.	-	0	ID=GCA000144955_01576;Name=nucleotide exchange factor GrpE;locus_tag=GCA000144955_01576;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005737,GO:0006457,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000144955_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,RefSeq:WP_000182220.1,SO:0001217,UniParc:UPI0001DDA3DB,UniRef:UniRef100_UPI0001DDA3DB,UniRef:UniRef50_Q2FXZ1,UniRef:UniRef90_Q2FXZ1
contig_1	Pyrodigal	gene	1657896	1658873	.	-	.	ID=GCA000144955_01577_gene;locus_tag=GCA000144955_01577;gene=hrcA
contig_1	Pyrodigal	CDS	1657896	1658873	.	-	0	ID=GCA000144955_01577;Name=heat-inducible transcriptional repressor HrcA;locus_tag=GCA000144955_01577;product=heat-inducible transcriptional repressor HrcA;Dbxref=GO:0003677,GO:0006355,GO:0045892;gene=hrcA;Parent=GCA000144955_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1420,COG:K,KEGG:K03705,RefSeq:WP_000627147.1,SO:0001217,UniParc:UPI00003B1713,UniRef:UniRef100_Q6GGB8,UniRef:UniRef50_P68792,UniRef:UniRef90_P68792
contig_1	Pyrodigal	gene	1658973	1660130	.	-	.	ID=GCA000144955_01578_gene;locus_tag=GCA000144955_01578;gene=hemW
contig_1	Pyrodigal	CDS	1658973	1660130	.	-	0	ID=GCA000144955_01578;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000144955_01578;product=radical SAM family heme chaperone HemW;Dbxref=GO:0005737,GO:0006779,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000144955_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,SO:0001217,UniRef:UniRef50_A0A0D6HI97,UniRef:UniRef90_A0A0D6HI97
contig_1	Infernal	gene	1660343	1660649	.	+	.	ID=GCA000144955_01579_gene;locus_tag=GCA000144955_01579;gene=S35
contig_1	Infernal	ncRNA	1660343	1660649	5.5e-19	+	.	ID=GCA000144955_01579;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01579;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01579_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1660716	1662539	.	-	.	ID=GCA000144955_01580_gene;locus_tag=GCA000144955_01580;gene=lepA
contig_1	Pyrodigal	CDS	1660716	1662539	.	-	0	ID=GCA000144955_01580;Name=translation elongation factor 4;locus_tag=GCA000144955_01580;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:1990606;gene=lepA;Parent=GCA000144955_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_000368338.1,SO:0001217,UniParc:UPI000012E48A,UniRef:UniRef100_P65271,UniRef:UniRef50_Q2FXY7,UniRef:UniRef90_Q2FXY7;ec_number=3.6.5.n1
contig_1	Pyrodigal	gene	1662885	1663136	.	+	.	ID=GCA000144955_01581_gene;locus_tag=GCA000144955_01581;gene=rpsT
contig_1	Pyrodigal	CDS	1662885	1663136	.	+	0	ID=GCA000144955_01581;Name=30S ribosomal protein S20;locus_tag=GCA000144955_01581;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000144955_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_001274017.1,SO:0001217,UniParc:UPI0000048018,UniRef:UniRef100_Q2FXY6,UniRef:UniRef50_Q5HNW1,UniRef:UniRef90_Q2FXY6
contig_1	Pyrodigal	gene	1663181	1664155	.	-	.	ID=GCA000144955_01582_gene;locus_tag=GCA000144955_01582;gene=holA
contig_1	Pyrodigal	CDS	1663181	1664155	.	-	0	ID=GCA000144955_01582;Name=DNA polymerase III subunit delta;locus_tag=GCA000144955_01582;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=holA;Parent=GCA000144955_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_001282574.1,SO:0001217,UniParc:UPI0001DDA3DE,UniRef:UniRef100_UPI0001DDA3DE,UniRef:UniRef50_K9AV25,UniRef:UniRef90_A0A3A5LSD9;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1664212	1666413	.	-	.	ID=GCA000144955_01583_gene;locus_tag=GCA000144955_01583;gene=comEC
contig_1	Pyrodigal	CDS	1664212	1666413	.	-	0	ID=GCA000144955_01583;Name=DNA internalization-related competence protein ComEC/Rec2;locus_tag=GCA000144955_01583;product=DNA internalization-related competence protein ComEC/Rec2;Dbxref=GO:0005215,GO:0009290,GO:0016020;gene=comEC;Parent=GCA000144955_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2333,COG:U,KEGG:K02238,RefSeq:WP_044025908.1,SO:0001217,UniParc:UPI0005C64A9E,UniRef:UniRef100_UPI0005C64A9E,UniRef:UniRef50_A0A6K1MRM3,UniRef:UniRef90_A0A6K1MRM3
contig_1	Pyrodigal	gene	1666418	1666849	.	-	.	ID=GCA000144955_01584_gene;locus_tag=GCA000144955_01584;gene=comEB
contig_1	Pyrodigal	CDS	1666418	1666849	.	-	0	ID=GCA000144955_01584;Name=ComE operon protein 2;locus_tag=GCA000144955_01584;product=ComE operon protein 2;gene=comEB;Parent=GCA000144955_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2131,COG:FJ,RefSeq:WP_001548979.1,SO:0001217,UniParc:UPI00004B5C1B,UniRef:UniRef100_Q2G2A1,UniRef:UniRef50_A0A1E7X972,UniRef:UniRef90_A0A380G1G9
contig_1	Pyrodigal	gene	1666971	1667648	.	-	.	ID=GCA000144955_01585_gene;locus_tag=GCA000144955_01585;gene=comEA
contig_1	Pyrodigal	CDS	1666971	1667648	.	-	0	ID=GCA000144955_01585;Name=ComE operon protein 1;locus_tag=GCA000144955_01585;product=ComE operon protein 1;gene=comEA;Parent=GCA000144955_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,SO:0001217,UniParc:UPI0001DDA3E0,UniRef:UniRef100_A0A6K2QPC8,UniRef:UniRef50_A0A9P2YX25,UniRef:UniRef90_A0A9P2YX25
contig_1	Pyrodigal	gene	1667697	1668413	.	-	.	ID=GCA000144955_01586_gene;locus_tag=GCA000144955_01586
contig_1	Pyrodigal	CDS	1667697	1668413	.	-	0	ID=GCA000144955_01586;Name=Methyltransferase;locus_tag=GCA000144955_01586;product=Methyltransferase;Parent=GCA000144955_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4976,COG:R,RefSeq:WP_000084826.1,SO:0001217,UniParc:UPI0001DDA3E1,UniRef:UniRef100_UPI0001DDA3E1,UniRef:UniRef50_A0A2S6DNM9,UniRef:UniRef90_A0A2S6DNM9
contig_1	Pyrodigal	gene	1668416	1668769	.	-	.	ID=GCA000144955_01587_gene;locus_tag=GCA000144955_01587;gene=rsfS
contig_1	Pyrodigal	CDS	1668416	1668769	.	-	0	ID=GCA000144955_01587;Name=ribosome silencing factor;locus_tag=GCA000144955_01587;product=ribosome silencing factor;Dbxref=GO:0017148,GO:0043022;gene=rsfS;Parent=GCA000144955_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_001088020.1,SO:0001217,UniParc:UPI00000CA96B,UniRef:UniRef100_A0A7Z7QZN3,UniRef:UniRef50_Q2G298,UniRef:UniRef90_Q2G298
contig_1	Pyrodigal	gene	1668770	1669354	.	-	.	ID=GCA000144955_01588_gene;locus_tag=GCA000144955_01588;gene=nadD
contig_1	Pyrodigal	CDS	1668770	1669354	.	-	0	ID=GCA000144955_01588;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000144955_01588;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000166,GO:0000309,GO:0004515,GO:0005737,GO:0009435,GO:0016787,GO:0046872;gene=nadD;Parent=GCA000144955_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1713,COG:TR,RefSeq:WP_001019324.1,SO:0001217,UniParc:UPI00000D767A,UniRef:UniRef100_Q2G297,UniRef:UniRef50_Q2G297,UniRef:UniRef90_Q2G297;ec_number=3.6.1.41
contig_1	Pyrodigal	gene	1669344	1669913	.	-	.	ID=GCA000144955_01589_gene;locus_tag=GCA000144955_01589;gene=nadD
contig_1	Pyrodigal	CDS	1669344	1669913	.	-	0	ID=GCA000144955_01589;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000144955_01589;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000309,GO:0004515,GO:0005524,GO:0005737,GO:0009435;gene=nadD;Parent=GCA000144955_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1057,COG:H,RefSeq:WP_000725159.1,SO:0001217,UniParc:UPI0001DDA3E2,UniRef:UniRef100_UPI0001DDA3E2,UniRef:UniRef50_Q2FXY3,UniRef:UniRef90_Q2FXY3;ec_number=2.7.7.18
contig_1	Pyrodigal	gene	1669916	1670206	.	-	.	ID=GCA000144955_01590_gene;locus_tag=GCA000144955_01590;gene=yhbY
contig_1	Pyrodigal	CDS	1669916	1670206	.	-	0	ID=GCA000144955_01590;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA000144955_01590;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA000144955_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_000955235.1,SO:0001217,UniParc:UPI00000D7880,UniRef:UniRef100_A0A2P8X140,UniRef:UniRef50_C0ZB08,UniRef:UniRef90_Q2FXY2
contig_1	Pyrodigal	gene	1670210	1671016	.	-	.	ID=GCA000144955_01591_gene;locus_tag=GCA000144955_01591;gene=aroE
contig_1	Pyrodigal	CDS	1670210	1671016	.	-	0	ID=GCA000144955_01591;Name=Shikimate dehydrogenase (NADP(+));locus_tag=GCA000144955_01591;product=Shikimate dehydrogenase (NADP(+));Dbxref=GO:0004764,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0050661;gene=aroE;Parent=GCA000144955_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_000666756.1,SO:0001217,UniParc:UPI0001DDA3E3,UniRef:UniRef100_UPI0001DDA3E3,UniRef:UniRef50_Q5HNV1,UniRef:UniRef90_Q2FXY1;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	1671030	1672130	.	-	.	ID=GCA000144955_01592_gene;locus_tag=GCA000144955_01592;gene=yqeH
contig_1	Pyrodigal	CDS	1671030	1672130	.	-	0	ID=GCA000144955_01592;Name=ribosome biogenesis GTPase YqeH;locus_tag=GCA000144955_01592;product=ribosome biogenesis GTPase YqeH;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=yqeH;Parent=GCA000144955_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_001280149.1,SO:0001217,UniParc:UPI0001DDA3E4,UniRef:UniRef100_UPI0001DDA3E4,UniRef:UniRef50_P54453,UniRef:UniRef90_Q2FXY0
contig_1	Pyrodigal	gene	1672131	1672658	.	-	.	ID=GCA000144955_01593_gene;locus_tag=GCA000144955_01593;gene=yqeG
contig_1	Pyrodigal	CDS	1672131	1672658	.	-	0	ID=GCA000144955_01593;Name=YqeG family HAD IIIA-type phosphatase;locus_tag=GCA000144955_01593;product=YqeG family HAD IIIA-type phosphatase;gene=yqeG;Parent=GCA000144955_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2179,COG:R,RefSeq:WP_000524902.1,SO:0001217,UniParc:UPI0000054297,UniRef:UniRef100_Q2FXX9,UniRef:UniRef50_Q2FXX9,UniRef:UniRef90_Q2FXX9
contig_1	Pyrodigal	gene	1672678	1673364	.	-	.	ID=GCA000144955_01594_gene;locus_tag=GCA000144955_01594;gene=mtnN
contig_1	Pyrodigal	CDS	1672678	1673364	.	-	0	ID=GCA000144955_01594;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA000144955_01594;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019284,GO:0019509;gene=mtnN;Parent=GCA000144955_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01243,RefSeq:WP_000579267.1,SO:0001217,UniParc:UPI0001DDA3E5,UniRef:UniRef100_A0A380E287,UniRef:UniRef50_Q4L6V0,UniRef:UniRef90_Q2FXX8;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	1673677	1673946	.	+	.	ID=GCA000144955_01595_gene;locus_tag=GCA000144955_01595
contig_1	Pyrodigal	CDS	1673677	1673946	.	+	0	ID=GCA000144955_01595;Name=hypothetical protein;locus_tag=GCA000144955_01595;product=hypothetical protein;Parent=GCA000144955_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829750.1,SO:0001217,UniParc:UPI0000054295,UniRef:UniRef100_Q2FXX6,UniRef:UniRef50_Q2FXX6,UniRef:UniRef90_Q2FXX6
contig_1	Pyrodigal	gene	1674324	1674899	.	-	.	ID=GCA000144955_01596_gene;locus_tag=GCA000144955_01596
contig_1	Pyrodigal	CDS	1674324	1674899	.	-	0	ID=GCA000144955_01596;Name=Enterotoxin family protein;locus_tag=GCA000144955_01596;product=Enterotoxin family protein;Parent=GCA000144955_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380DV49
contig_1	Pyrodigal	gene	1675347	1676576	.	-	.	ID=GCA000144955_01597_gene;locus_tag=GCA000144955_01597;gene=mntH
contig_1	Pyrodigal	CDS	1675347	1676576	.	-	0	ID=GCA000144955_01597;Name=Divalent metal cation transporter;locus_tag=GCA000144955_01597;product=Divalent metal cation transporter;gene=mntH;Parent=GCA000144955_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_000533238.1,SO:0001217,UniParc:UPI0000054292,UniRef:UniRef100_Q2FXX3,UniRef:UniRef50_Q5HNU7,UniRef:UniRef90_Q2FXX3
contig_1	Pyrodigal	gene	1676588	1677340	.	-	.	ID=GCA000144955_01598_gene;locus_tag=GCA000144955_01598;gene=pxpA
contig_1	Pyrodigal	CDS	1676588	1677340	.	-	0	ID=GCA000144955_01598;Name=5-oxoprolinase subunit PxpA;locus_tag=GCA000144955_01598;product=5-oxoprolinase subunit PxpA;Dbxref=GO:0003824,GO:0005524,GO:0005975,GO:0017168;gene=pxpA;Parent=GCA000144955_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1540,COG:E,RefSeq:WP_001261802.1,SO:0001217,UniParc:UPI0001DDA3E7,UniRef:UniRef100_UPI0001DDA3E7,UniRef:UniRef50_Q57RM2,UniRef:UniRef90_Q2FXX2;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1677340	1678701	.	-	.	ID=GCA000144955_01599_gene;locus_tag=GCA000144955_01599;gene=accC
contig_1	Pyrodigal	CDS	1677340	1678701	.	-	0	ID=GCA000144955_01599;Name=Acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000144955_01599;product=Acetyl-CoA carboxylase biotin carboxylase subunit;gene=accC;Parent=GCA000144955_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_000881977.1,SO:0001217,UniParc:UPI0001DDA3E8,UniRef:UniRef100_UPI0001DDA3E8,UniRef:UniRef50_A0A2T4PV93,UniRef:UniRef90_A0AAE8P885
contig_1	Pyrodigal	gene	1678715	1679164	.	-	.	ID=GCA000144955_01600_gene;locus_tag=GCA000144955_01600;gene=accB
contig_1	Pyrodigal	CDS	1678715	1679164	.	-	0	ID=GCA000144955_01600;Name=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;locus_tag=GCA000144955_01600;product=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;gene=accB;Parent=GCA000144955_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001019339.1,SO:0001217,UniParc:UPI0001C0BE82,UniRef:UniRef100_A0A0D1HK82,UniRef:UniRef50_A0A380FYW2,UniRef:UniRef90_A0A2W2SQL9
contig_1	Pyrodigal	gene	1679166	1680176	.	-	.	ID=GCA000144955_01601_gene;locus_tag=GCA000144955_01601;gene=pxpC
contig_1	Pyrodigal	CDS	1679166	1680176	.	-	0	ID=GCA000144955_01601;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000144955_01601;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000144955_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000023328.1,SO:0001217,UniParc:UPI0001DDA3E9,UniRef:UniRef100_UPI0001DDA3E9,UniRef:UniRef50_Q2FXW9,UniRef:UniRef90_Q2FXW9
contig_1	Pyrodigal	gene	1680166	1680900	.	-	.	ID=GCA000144955_01602_gene;locus_tag=GCA000144955_01602;gene=pxpB
contig_1	Pyrodigal	CDS	1680166	1680900	.	-	0	ID=GCA000144955_01602;Name=5-oxoprolinase subunit PxpB;locus_tag=GCA000144955_01602;product=5-oxoprolinase subunit PxpB;Dbxref=GO:0005975,GO:0008152,GO:0017168;gene=pxpB;Parent=GCA000144955_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000383171.1,SO:0001217,UniParc:UPI0001DDA3EA,UniRef:UniRef100_UPI0001DDA3EA,UniRef:UniRef50_A0A9X0PF13,UniRef:UniRef90_W8U5F9;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1681226	1681702	.	-	.	ID=GCA000144955_01603_gene;locus_tag=GCA000144955_01603;gene=greA
contig_1	Pyrodigal	CDS	1681226	1681702	.	-	0	ID=GCA000144955_01603;Name=transcription elongation factor GreA;locus_tag=GCA000144955_01603;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greA;Parent=GCA000144955_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_000431312.1,SO:0001217,UniParc:UPI000005428C,UniRef:UniRef100_Q2FXW7,UniRef:UniRef50_Q2FXW7,UniRef:UniRef90_Q2FXW7
contig_1	Pyrodigal	gene	1681730	1682353	.	-	.	ID=GCA000144955_01604_gene;locus_tag=GCA000144955_01604;gene=udk
contig_1	Pyrodigal	CDS	1681730	1682353	.	-	0	ID=GCA000144955_01604;Name=uridine kinase;locus_tag=GCA000144955_01604;product=uridine kinase;Dbxref=GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211;gene=udk;Parent=GCA000144955_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,RefSeq:WP_000648617.1,SO:0001217,UniParc:UPI000005428B,UniRef:UniRef100_Q2FXW6,UniRef:UniRef50_Q9KDD8,UniRef:UniRef90_Q2FXW6;ec_number=2.7.1.48
contig_1	Pyrodigal	gene	1682353	1683621	.	-	.	ID=GCA000144955_01605_gene;locus_tag=GCA000144955_01605;gene=rlhA
contig_1	Pyrodigal	CDS	1682353	1683621	.	-	0	ID=GCA000144955_01605;Name=Peptidase family U32 C-terminal domain-containing protein;locus_tag=GCA000144955_01605;product=Peptidase family U32 C-terminal domain-containing protein;gene=rlhA;Parent=GCA000144955_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_000848307.1,SO:0001217,UniParc:UPI0001DDA3EB,UniRef:UniRef100_UPI0001DDA3EB,UniRef:UniRef50_O32034,UniRef:UniRef90_Q2FXW5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1683633	1684556	.	-	.	ID=GCA000144955_01606_gene;locus_tag=GCA000144955_01606;gene=rlhA
contig_1	Pyrodigal	CDS	1683633	1684556	.	-	0	ID=GCA000144955_01606;Name=Peptidase U32 family protein;locus_tag=GCA000144955_01606;product=Peptidase U32 family protein;gene=rlhA;Parent=GCA000144955_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,RefSeq:WP_000137775.1,SO:0001217,UniParc:UPI00000D9E6B,UniRef:UniRef100_Q2FXW4,UniRef:UniRef50_O32035,UniRef:UniRef90_A0A389PYG2
contig_1	Pyrodigal	gene	1684559	1685197	.	-	.	ID=GCA000144955_01607_gene;locus_tag=GCA000144955_01607;gene=trmR
contig_1	Pyrodigal	CDS	1684559	1685197	.	-	0	ID=GCA000144955_01607;Name=tRNA 5-hydroxyuridine methyltransferase;locus_tag=GCA000144955_01607;product=tRNA 5-hydroxyuridine methyltransferase;gene=trmR;Parent=GCA000144955_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4122,COG:J,RefSeq:WP_000342264.1,SO:0001217,UniParc:UPI0001DDA3EC,UniRef:UniRef100_UPI0001DDA3EC,UniRef:UniRef50_A0A2A1K8K5,UniRef:UniRef90_A0A6B1RN35
contig_1	Pyrodigal	gene	1685482	1685790	.	-	.	ID=GCA000144955_01608_gene;locus_tag=GCA000144955_01608;gene=yrzB
contig_1	Pyrodigal	CDS	1685482	1685790	.	-	0	ID=GCA000144955_01608;Name=UPF0473 protein SAOUHSC_01719;locus_tag=GCA000144955_01608;product=UPF0473 protein SAOUHSC_01719;gene=yrzB;Parent=GCA000144955_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3906,COG:S,RefSeq:WP_000134779.1,SO:0001217,UniParc:UPI0000054287,UniRef:UniRef100_Q2FXW2,UniRef:UniRef50_Q2FXW2,UniRef:UniRef90_Q2FXW2
contig_1	Pyrodigal	gene	1685805	1686233	.	-	.	ID=GCA000144955_01609_gene;locus_tag=GCA000144955_01609;gene=ruvX
contig_1	Pyrodigal	CDS	1685805	1686233	.	-	0	ID=GCA000144955_01609;Name=Holliday junction resolvase RuvX;locus_tag=GCA000144955_01609;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005829,GO:0006364;gene=ruvX;Parent=GCA000144955_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_000939059.1,SO:0001217,UniParc:UPI0000054286,UniRef:UniRef100_Q2FXW1,UniRef:UniRef50_Q2FXW1,UniRef:UniRef90_Q2FXW1;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1686237	1686497	.	-	.	ID=GCA000144955_01610_gene;locus_tag=GCA000144955_01610;gene=ireB
contig_1	Pyrodigal	CDS	1686237	1686497	.	-	0	ID=GCA000144955_01610;Name=IreB family regulatory phosphoprotein;locus_tag=GCA000144955_01610;product=IreB family regulatory phosphoprotein;gene=ireB;Parent=GCA000144955_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4472,COG:S,RefSeq:WP_000426912.1,SO:0001217,UniParc:UPI00000D778B,UniRef:UniRef100_Q2FXW0,UniRef:UniRef50_Q7WY61,UniRef:UniRef90_Q2FXW0
contig_1	Pyrodigal	gene	1686560	1689193	.	-	.	ID=GCA000144955_01611_gene;locus_tag=GCA000144955_01611;gene=alaS
contig_1	Pyrodigal	CDS	1686560	1689193	.	-	0	ID=GCA000144955_01611;Name=alanine--tRNA ligase;locus_tag=GCA000144955_01611;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0016740;gene=alaS;Parent=GCA000144955_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,SO:0001217,UniRef:UniRef50_Q03ER8,UniRef:UniRef90_Q2FXV9;ec_number=6.1.1.7
contig_1	Infernal	regulatory_region	1689327	1689503	5.9e-13	-	.	ID=BPGLLONNDN_173;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1689537	1692014	.	-	.	ID=GCA000144955_01612_gene;locus_tag=GCA000144955_01612;gene=recD
contig_1	Pyrodigal	CDS	1689537	1692014	.	-	0	ID=GCA000144955_01612;Name=ATP-dependent RecD2 DNA helicase;locus_tag=GCA000144955_01612;product=ATP-dependent RecD2 DNA helicase;gene=recD;Parent=GCA000144955_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_001283313.1,SO:0001217,UniParc:UPI0001DDA3EE,UniRef:UniRef100_UPI0001DDA3EE,UniRef:UniRef50_A0A654AZ37,UniRef:UniRef90_Q2FXV8
contig_1	Pyrodigal	gene	1692016	1692684	.	-	.	ID=GCA000144955_01613_gene;locus_tag=GCA000144955_01613;gene=tPR
contig_1	Pyrodigal	CDS	1692016	1692684	.	-	0	ID=GCA000144955_01613;Name=Tetratricopeptide repeat protein;locus_tag=GCA000144955_01613;product=Tetratricopeptide repeat protein;gene=tPR;Parent=GCA000144955_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0457,COG:R,RefSeq:WP_000567014.1,SO:0001217,UniParc:UPI0001DDA3EF,UniRef:UniRef100_UPI0001DDA3EF,UniRef:UniRef50_A0A2A1KA84,UniRef:UniRef90_A0A7Z1N2M0
contig_1	Infernal	gene	1692897	1693159	.	+	.	ID=GCA000144955_01614_gene;locus_tag=GCA000144955_01614;gene=S35
contig_1	Infernal	ncRNA	1692897	1693159	2.5e-18	+	.	ID=GCA000144955_01614;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01614;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01614_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1693256	1694374	.	-	.	ID=GCA000144955_01615_gene;locus_tag=GCA000144955_01615;gene=mnmA
contig_1	Pyrodigal	CDS	1693256	1694374	.	-	0	ID=GCA000144955_01615;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000144955_01615;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0005524,GO:0005737,GO:0008033,GO:0016740,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000144955_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_000066097.1,SO:0001217,UniParc:UPI000013748D,UniRef:UniRef100_Q2FXV6,UniRef:UniRef50_Q97T38,UniRef:UniRef90_Q2FXV6;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	1694375	1695517	.	-	.	ID=GCA000144955_01616_gene;locus_tag=GCA000144955_01616;gene=nifS
contig_1	Pyrodigal	CDS	1694375	1695517	.	-	0	ID=GCA000144955_01616;Name=cysteine desulfurase;locus_tag=GCA000144955_01616;product=cysteine desulfurase;gene=nifS;Parent=GCA000144955_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_000409167.1,SO:0001217,UniParc:UPI000005427F,UniRef:UniRef100_Q2FXV4,UniRef:UniRef50_A0A391MGC8,UniRef:UniRef90_A0A391MGC8;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1695829	1696842	.	+	.	ID=GCA000144955_01617_gene;locus_tag=GCA000144955_01617;gene=ssuD
contig_1	Pyrodigal	CDS	1695829	1696842	.	+	0	ID=GCA000144955_01617;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000144955_01617;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000144955_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000985897.1,SO:0001217,UniParc:UPI0001DDA58C,UniRef:UniRef100_UPI0001DDA58C,UniRef:UniRef50_A0A0D6HHK7,UniRef:UniRef90_A0A0D6HHK7
contig_1	Pyrodigal	gene	1697079	1697225	.	-	.	ID=GCA000144955_01618_gene;locus_tag=GCA000144955_01618
contig_1	Pyrodigal	CDS	1697079	1697225	.	-	0	ID=GCA000144955_01618;Name=SAS049 family protein;locus_tag=GCA000144955_01618;product=SAS049 family protein;Parent=GCA000144955_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009238.1,SO:0001217,UniParc:UPI000005427D,UniRef:UniRef100_Q2FXV2,UniRef:UniRef50_A0A7Z0RRV6,UniRef:UniRef90_Q2FXV2
contig_1	Pyrodigal	gene	1697265	1697447	.	-	.	ID=GCA000144955_01619_gene;locus_tag=GCA000144955_01619;gene=yjbJ
contig_1	Pyrodigal	CDS	1697265	1697447	.	-	0	ID=GCA000144955_01619;Name=UPF0337 protein SAS1561;locus_tag=GCA000144955_01619;product=UPF0337 protein SAS1561;gene=yjbJ;Parent=GCA000144955_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752909.1,SO:0001217,UniParc:UPI000005427C,UniRef:UniRef100_Q2FXV1,UniRef:UniRef50_Q2FXV1,UniRef:UniRef90_Q2FXV1
contig_1	Pyrodigal	gene	1697547	1697969	.	-	.	ID=GCA000144955_01620_gene;locus_tag=GCA000144955_01620;gene=cymR
contig_1	Pyrodigal	CDS	1697547	1697969	.	-	0	ID=GCA000144955_01620;Name=cysteine metabolism transcriptional regulator CymR;locus_tag=GCA000144955_01620;product=cysteine metabolism transcriptional regulator CymR;gene=cymR;Parent=GCA000144955_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,KEGG:K17472,RefSeq:WP_000704122.1,SO:0001217,UniParc:UPI00000D7899,UniRef:UniRef100_A0A7Z7W340,UniRef:UniRef50_B9E703,UniRef:UniRef90_A0A2X2K6J6
contig_1	Pyrodigal	gene	1698054	1699328	.	+	.	ID=GCA000144955_01621_gene;locus_tag=GCA000144955_01621;gene=rarA
contig_1	Pyrodigal	CDS	1698054	1699328	.	+	0	ID=GCA000144955_01621;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000144955_01621;product=AAA+ ATPase domain-containing protein;gene=rarA;Parent=GCA000144955_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2256,COG:L,KEGG:K07478,RefSeq:WP_000102737.1,SO:0001217,UniParc:UPI0001DDA58D,UniRef:UniRef100_UPI0001DDA58D,UniRef:UniRef50_O34528,UniRef:UniRef90_Q2FXU8
contig_1	Pyrodigal	gene	1699489	1700262	.	-	.	ID=GCA000144955_01622_gene;locus_tag=GCA000144955_01622;gene=tcdA
contig_1	Pyrodigal	CDS	1699489	1700262	.	-	0	ID=GCA000144955_01622;Name=HesA/moeB/thiF family protein;locus_tag=GCA000144955_01622;product=HesA/moeB/thiF family protein;gene=tcdA;Parent=GCA000144955_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_000682646.1,SO:0001217,UniParc:UPI0000054276,UniRef:UniRef100_Q2FXU7,UniRef:UniRef50_A0A2S5CXU7,UniRef:UniRef90_A0A077UH91
contig_1	Infernal	gene	1700454	1700644	.	-	.	ID=GCA000144955_01623_gene;locus_tag=GCA000144955_01623;gene=6S
contig_1	Infernal	ncRNA	1700454	1700644	1.7e-16	-	.	ID=GCA000144955_01623;Name=6S / SsrS RNA;locus_tag=GCA000144955_01623;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA000144955_01623_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013
contig_1	Pyrodigal	gene	1700722	1702488	.	-	.	ID=GCA000144955_01624_gene;locus_tag=GCA000144955_01624;gene=aspS
contig_1	Pyrodigal	CDS	1700722	1702488	.	-	0	ID=GCA000144955_01624;Name=aspartate--tRNA ligase;locus_tag=GCA000144955_01624;product=aspartate--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006418,GO:0006422,GO:0016740,GO:0016874;gene=aspS;Parent=GCA000144955_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,RefSeq:WP_000044799.1,SO:0001217,UniParc:UPI0000030ADD,UniRef:UniRef100_Q2FG97,UniRef:UniRef50_A9KIA6,UniRef:UniRef90_Q2FXU5;ec_number=6.1.1.12
contig_1	Pyrodigal	gene	1702504	1703766	.	-	.	ID=GCA000144955_01625_gene;locus_tag=GCA000144955_01625;gene=hisS
contig_1	Pyrodigal	CDS	1702504	1703766	.	-	0	ID=GCA000144955_01625;Name=histidine--tRNA ligase;locus_tag=GCA000144955_01625;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427,GO:0016740;gene=hisS;Parent=GCA000144955_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_000590825.1,SO:0001217,UniParc:UPI0001DDA58E,UniRef:UniRef100_UPI0001DDA58E,UniRef:UniRef50_O32039,UniRef:UniRef90_Q2FXU4;ec_number=6.1.1.21
contig_1	Pyrodigal	gene	1704227	1705102	.	-	.	ID=GCA000144955_01626_gene;locus_tag=GCA000144955_01626;gene=lytH
contig_1	Pyrodigal	CDS	1704227	1705102	.	-	0	ID=GCA000144955_01626;Name=putative cell wall amidase LytH;locus_tag=GCA000144955_01626;product=putative cell wall amidase LytH;Dbxref=GO:0005576,GO:0008745,GO:0009253,GO:0030288,GO:0071555;gene=lytH;Parent=GCA000144955_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0860,COG:M,KEGG:K01448,RefSeq:WP_000717800.1,SO:0001217,UniParc:UPI0000054273,UniRef:UniRef100_Q2FXU3,UniRef:UniRef50_Q2FXU3,UniRef:UniRef90_Q2FXU3;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	1705099	1705551	.	-	.	ID=GCA000144955_01627_gene;locus_tag=GCA000144955_01627;gene=dtd
contig_1	Pyrodigal	CDS	1705099	1705551	.	-	0	ID=GCA000144955_01627;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000144955_01627;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000144955_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_000869979.1,SO:0001217,UniParc:UPI00003B1730,UniRef:UniRef100_Q6GG71,UniRef:UniRef50_Q2FXU2,UniRef:UniRef90_Q2FXU2;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	1705563	1707773	.	-	.	ID=GCA000144955_01628_gene;locus_tag=GCA000144955_01628;gene=relA
contig_1	Pyrodigal	CDS	1705563	1707773	.	-	0	ID=GCA000144955_01628;Name=GTP pyrophosphokinase;locus_tag=GCA000144955_01628;product=GTP pyrophosphokinase;Dbxref=GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0015970,GO:0016301;gene=relA;Parent=GCA000144955_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,SO:0001217,UniParc:UPI0000054270,UniRef:UniRef100_Q6GG70,UniRef:UniRef50_Q931Q4,UniRef:UniRef90_Q6GG70;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	1708180	1708698	.	-	.	ID=GCA000144955_01629_gene;locus_tag=GCA000144955_01629;gene=apt
contig_1	Pyrodigal	CDS	1708180	1708698	.	-	0	ID=GCA000144955_01629;Name=adenine phosphoribosyltransferase;locus_tag=GCA000144955_01629;product=adenine phosphoribosyltransferase;Dbxref=GO:0002055,GO:0003999,GO:0005737,GO:0006166,GO:0006168,GO:0009116,GO:0016208,GO:0044209;gene=apt;Parent=GCA000144955_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,RefSeq:WP_000364542.1,SO:0001217,UniParc:UPI000005426F,UniRef:UniRef100_Q2FXU0,UniRef:UniRef50_Q1G9R7,UniRef:UniRef90_Q2FXU0;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	1708720	1710993	.	-	.	ID=GCA000144955_01630_gene;locus_tag=GCA000144955_01630;gene=recJ
contig_1	Pyrodigal	CDS	1708720	1710993	.	-	0	ID=GCA000144955_01630;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA000144955_01630;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA000144955_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4199,COG:L,KEGG:K07462,RefSeq:WP_000595000.1,SO:0001217,UniParc:UPI0001DDA58F,UniRef:UniRef100_UPI0001DDA58F,UniRef:UniRef50_A0AAP8TSV1,UniRef:UniRef90_A0A390R1U9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1711196	1713475	.	-	.	ID=GCA000144955_01631_gene;locus_tag=GCA000144955_01631;gene=secDF
contig_1	Pyrodigal	CDS	1711196	1713475	.	-	0	ID=GCA000144955_01631;Name=protein translocase subunit SecDF;locus_tag=GCA000144955_01631;product=protein translocase subunit SecDF;gene=secDF;Parent=GCA000144955_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,RefSeq:WP_000749796.1,SO:0001217,UniParc:UPI0001C0BB1E,UniRef:UniRef100_A0A0U1MMC4,UniRef:UniRef50_B9E715,UniRef:UniRef90_W8UA89
contig_1	Pyrodigal	gene	1713750	1714010	.	-	.	ID=GCA000144955_01632_gene;locus_tag=GCA000144955_01632;gene=yajC
contig_1	Pyrodigal	CDS	1713750	1714010	.	-	0	ID=GCA000144955_01632;Name=preprotein translocase subunit YajC;locus_tag=GCA000144955_01632;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015450;gene=yajC;Parent=GCA000144955_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_001160682.1,SO:0001217,UniParc:UPI000005426C,UniRef:UniRef100_Q2FXT7,UniRef:UniRef50_B9DNG6,UniRef:UniRef90_A0A2K4AGL2
contig_1	Pyrodigal	gene	1714029	1715168	.	-	.	ID=GCA000144955_01633_gene;locus_tag=GCA000144955_01633;gene=tgt
contig_1	Pyrodigal	CDS	1714029	1715168	.	-	0	ID=GCA000144955_01633;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA000144955_01633;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA000144955_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_001112047.1,SO:0001217,UniParc:UPI0001DDA590,UniRef:UniRef100_UPI0001DDA590,UniRef:UniRef50_O32053,UniRef:UniRef90_Q2FXT6;ec_number=2.4.2.29
contig_1	Pyrodigal	gene	1715191	1716216	.	-	.	ID=GCA000144955_01634_gene;locus_tag=GCA000144955_01634;gene=queA
contig_1	Pyrodigal	CDS	1715191	1716216	.	-	0	ID=GCA000144955_01634;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA000144955_01634;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0002099,GO:0005737,GO:0008616,GO:0016740,GO:0016853,GO:0051075;gene=queA;Parent=GCA000144955_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_001019178.1,SO:0001217,UniParc:UPI0000132E92,UniRef:UniRef100_P65950,UniRef:UniRef50_A8AYK5,UniRef:UniRef90_Q2FXT5;ec_number=2.4.99.17
contig_1	Pyrodigal	gene	1716218	1717222	.	-	.	ID=GCA000144955_01635_gene;locus_tag=GCA000144955_01635;gene=ruvB
contig_1	Pyrodigal	CDS	1716218	1717222	.	-	0	ID=GCA000144955_01635;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000144955_01635;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000144955_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_001005764.1,SO:0001217,UniParc:UPI0001B3AEA0,UniRef:UniRef100_A0A0U1MMF4,UniRef:UniRef50_O32055,UniRef:UniRef90_Q2FXT4;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1717254	1717856	.	-	.	ID=GCA000144955_01636_gene;locus_tag=GCA000144955_01636;gene=ruvA
contig_1	Pyrodigal	CDS	1717254	1717856	.	-	0	ID=GCA000144955_01636;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000144955_01636;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000144955_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_000271547.1,SO:0001217,UniParc:UPI00004B5C27,UniRef:UniRef100_Q2FXT3,UniRef:UniRef50_Q2FXT3,UniRef:UniRef90_Q2FXT3;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1717870	1718325	.	-	.	ID=GCA000144955_01637_gene;locus_tag=GCA000144955_01637;gene=pheB
contig_1	Pyrodigal	CDS	1717870	1718325	.	-	0	ID=GCA000144955_01637;Name=ACT domain-containing protein;locus_tag=GCA000144955_01637;product=ACT domain-containing protein;gene=pheB;Parent=GCA000144955_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4492,COG:R,KEGG:K06209,RefSeq:WP_000368897.1,SO:0001217,UniParc:UPI0001DDA591,UniRef:UniRef100_UPI0001DDA591,UniRef:UniRef50_Q2FXT2,UniRef:UniRef90_Q2FXT2;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1718338	1719630	.	-	.	ID=GCA000144955_01638_gene;locus_tag=GCA000144955_01638;gene=obgE
contig_1	Pyrodigal	CDS	1718338	1719630	.	-	0	ID=GCA000144955_01638;Name=GTPase ObgE;locus_tag=GCA000144955_01638;product=GTPase ObgE;Dbxref=GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=obgE;Parent=GCA000144955_01638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0536,COG:DL,RefSeq:WP_000496107.1,SO:0001217,UniParc:UPI0001DDA592,UniRef:UniRef100_UPI0001DDA592,UniRef:UniRef50_P20964,UniRef:UniRef90_Q2FXT1;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1720121	1720405	.	-	.	ID=GCA000144955_01639_gene;locus_tag=GCA000144955_01639;gene=rpmA
contig_1	Pyrodigal	CDS	1720121	1720405	.	-	0	ID=GCA000144955_01639;Name=50S ribosomal protein L27;locus_tag=GCA000144955_01639;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000144955_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_000916187.1,SO:0001217,UniParc:UPI0000133E1A,UniRef:UniRef100_Q2FXT0,UniRef:UniRef50_Q2FXT0,UniRef:UniRef90_Q2FXT0
contig_1	Pyrodigal	gene	1720417	1720737	.	-	.	ID=GCA000144955_01640_gene;locus_tag=GCA000144955_01640;gene=prp
contig_1	Pyrodigal	CDS	1720417	1720737	.	-	0	ID=GCA000144955_01640;Name=Ribosomal processing cysteine protease Prp;locus_tag=GCA000144955_01640;product=Ribosomal processing cysteine protease Prp;Dbxref=GO:0006508,GO:0008234,GO:0042254;gene=prp;Parent=GCA000144955_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2868,COG:S,KEGG:K07584,RefSeq:WP_000633692.1,SO:0001217,UniParc:UPI0000054263,UniRef:UniRef100_Q2FXS9,UniRef:UniRef50_Q2FXS9,UniRef:UniRef90_Q2FXS9;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	1720743	1721051	.	-	.	ID=GCA000144955_01641_gene;locus_tag=GCA000144955_01641;gene=rplU
contig_1	Pyrodigal	CDS	1720743	1721051	.	-	0	ID=GCA000144955_01641;Name=50S ribosomal protein L21;locus_tag=GCA000144955_01641;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA000144955_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,RefSeq:WP_000457386.1,SO:0001217,UniParc:UPI00000D766C,UniRef:UniRef100_Q2FXS8,UniRef:UniRef50_Q2FXS8,UniRef:UniRef90_Q2FXS8
contig_1	Pyrodigal	gene	1721413	1721943	.	-	.	ID=GCA000144955_01642_gene;locus_tag=GCA000144955_01642;gene=mreD
contig_1	Pyrodigal	CDS	1721413	1721943	.	-	0	ID=GCA000144955_01642;Name=rod shape-determining protein MreD;locus_tag=GCA000144955_01642;product=rod shape-determining protein MreD;Dbxref=GO:0008360,GO:0016020;gene=mreD;Parent=GCA000144955_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_001259925.1,SO:0001217,UniParc:UPI00000D7842,UniRef:UniRef100_Q2FXS7,UniRef:UniRef50_A0A0D0RNW4,UniRef:UniRef90_A0A0U1MP65
contig_1	Pyrodigal	gene	1721943	1722785	.	-	.	ID=GCA000144955_01643_gene;locus_tag=GCA000144955_01643;gene=mreC
contig_1	Pyrodigal	CDS	1721943	1722785	.	-	0	ID=GCA000144955_01643;Name=rod shape-determining protein MreC;locus_tag=GCA000144955_01643;product=rod shape-determining protein MreC;Dbxref=GO:0008360;gene=mreC;Parent=GCA000144955_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_000911041.1,SO:0001217,UniParc:UPI00000D78B1,UniRef:UniRef100_Q2FXS6,UniRef:UniRef50_A0A0H2VGM0,UniRef:UniRef90_D7URR5
contig_1	Pyrodigal	gene	1723176	1723649	.	-	.	ID=GCA000144955_01644_gene;locus_tag=GCA000144955_01644
contig_1	Pyrodigal	CDS	1723176	1723649	.	-	0	ID=GCA000144955_01644;Name=DUF4930 domain-containing protein;locus_tag=GCA000144955_01644;product=DUF4930 domain-containing protein;Parent=GCA000144955_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001236737.1,SO:0001217,UniParc:UPI0001DA222B,UniRef:UniRef100_A0A2P7CLT0,UniRef:UniRef50_A0A1J3ZXU8,UniRef:UniRef90_Q2FXS4
contig_1	Pyrodigal	gene	1724123	1724407	.	-	.	ID=GCA000144955_01645_gene;locus_tag=GCA000144955_01645
contig_1	Pyrodigal	CDS	1724123	1724407	.	-	0	ID=GCA000144955_01645;Name=MW1603 protein;locus_tag=GCA000144955_01645;product=MW1603 protein;Parent=GCA000144955_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171863.1,SO:0001217,UniParc:UPI00005FE56B,UniRef:UniRef100_A0A0U1MMH1,UniRef:UniRef50_Q2FXS3,UniRef:UniRef90_Q2FXS3
contig_1	Pyrodigal	gene	1724475	1725161	.	-	.	ID=GCA000144955_01646_gene;locus_tag=GCA000144955_01646;gene=radC
contig_1	Pyrodigal	CDS	1724475	1725161	.	-	0	ID=GCA000144955_01646;Name=DNA repair protein RadC;locus_tag=GCA000144955_01646;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281,GO:0006508,GO:0008237,GO:0046872;gene=radC;Parent=GCA000144955_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_000692877.1,SO:0001217,UniParc:UPI0001DDA594,UniRef:UniRef100_UPI0001DDA594,UniRef:UniRef50_P31337,UniRef:UniRef90_P31337
contig_1	Pyrodigal	gene	1725158	1725865	.	-	.	ID=GCA000144955_01647_gene;locus_tag=GCA000144955_01647;gene=gspO
contig_1	Pyrodigal	CDS	1725158	1725865	.	-	0	ID=GCA000144955_01647;Name=Prepilin peptidase A24 N-terminal domain-containing protein;locus_tag=GCA000144955_01647;product=Prepilin peptidase A24 N-terminal domain-containing protein;gene=gspO;Parent=GCA000144955_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1989,COG:NU,RefSeq:WP_000261111.1,SO:0001217,UniParc:UPI0001DDA595,UniRef:UniRef100_A0A0D1JKS9,UniRef:UniRef50_A0A077UH67,UniRef:UniRef90_Q2FXS1
contig_1	Pyrodigal	gene	1726127	1727398	.	-	.	ID=GCA000144955_01648_gene;locus_tag=GCA000144955_01648;gene=folC
contig_1	Pyrodigal	CDS	1726127	1727398	.	-	0	ID=GCA000144955_01648;Name=tetrahydrofolate synthase;locus_tag=GCA000144955_01648;product=tetrahydrofolate synthase;gene=folC;Parent=GCA000144955_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_001108334.1,SO:0001217,UniParc:UPI0001DDA596,UniRef:UniRef100_A0A380DU07,UniRef:UniRef50_Q2FXR9,UniRef:UniRef90_Q2FXR9
contig_1	Pyrodigal	gene	1727411	1730041	.	-	.	ID=GCA000144955_01649_gene;locus_tag=GCA000144955_01649;gene=valS
contig_1	Pyrodigal	CDS	1727411	1730041	.	-	0	ID=GCA000144955_01649;Name=valine--tRNA ligase;locus_tag=GCA000144955_01649;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004832,GO:0005524,GO:0005829,GO:0006438;gene=valS;Parent=GCA000144955_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,RefSeq:WP_000425366.1,SO:0001217,UniParc:UPI0001DDA597,UniRef:UniRef100_UPI0001DDA597,UniRef:UniRef50_P11931,UniRef:UniRef90_Q2FXR8;ec_number=6.1.1.9
contig_1	Infernal	regulatory_region	1730086	1730387	5.3e-14	-	.	ID=BPGLLONNDN_168;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1730445	1731005	.	+	.	ID=GCA000144955_01650_gene;locus_tag=GCA000144955_01650;gene=tag
contig_1	Pyrodigal	CDS	1730445	1731005	.	+	0	ID=GCA000144955_01650;Name=DNA-3-methyladenine glycosylase I;locus_tag=GCA000144955_01650;product=DNA-3-methyladenine glycosylase I;gene=tag;Parent=GCA000144955_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2818,COG:L,KEGG:K01246,RefSeq:WP_001001217.1,SO:0001217,UniParc:UPI0001DDA598,UniRef:UniRef100_UPI0001DDA598,UniRef:UniRef50_Q2FXR7,UniRef:UniRef90_Q2FXR7;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	1731228	1732295	.	-	.	ID=GCA000144955_01651_gene;locus_tag=GCA000144955_01651;gene=abrB
contig_1	Pyrodigal	CDS	1731228	1732295	.	-	0	ID=GCA000144955_01651;Name=AbrB family transcriptional regulator;locus_tag=GCA000144955_01651;product=AbrB family transcriptional regulator;gene=abrB;Parent=GCA000144955_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3180,COG:R,KEGG:K07120,SO:0001217,UniRef:UniRef50_Q2FXR6,UniRef:UniRef90_Q2FXR6
contig_1	Pyrodigal	gene	1732498	1733784	.	-	.	ID=GCA000144955_01652_gene;locus_tag=GCA000144955_01652;gene=hemL
contig_1	Pyrodigal	CDS	1732498	1733784	.	-	0	ID=GCA000144955_01652;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000144955_01652;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL;Parent=GCA000144955_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_001270862.1,SO:0001217,UniParc:UPI0001DDA743,UniRef:UniRef100_UPI0001DDA743,UniRef:UniRef50_Q2S1S3,UniRef:UniRef90_Q2FXR4;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	1733832	1734806	.	-	.	ID=GCA000144955_01653_gene;locus_tag=GCA000144955_01653;gene=hemB
contig_1	Pyrodigal	CDS	1733832	1734806	.	-	0	ID=GCA000144955_01653;Name=porphobilinogen synthase;locus_tag=GCA000144955_01653;product=porphobilinogen synthase;Dbxref=GO:0003824,GO:0004655,GO:0005829,GO:0006782,GO:0008270,GO:0033014,GO:0046872;gene=hemB;Parent=GCA000144955_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0113,COG:H,KEGG:K01698,RefSeq:WP_000667126.1,SO:0001217,UniParc:UPI0000054C1A,UniRef:UniRef100_Q2FXR3,UniRef:UniRef50_Q2FXR3,UniRef:UniRef90_Q2FXR3;ec_number=4.2.1.24
contig_1	Pyrodigal	gene	1734809	1735477	.	-	.	ID=GCA000144955_01654_gene;locus_tag=GCA000144955_01654;gene=hemD
contig_1	Pyrodigal	CDS	1734809	1735477	.	-	0	ID=GCA000144955_01654;Name=Uroporphyrinogen-III synthase;locus_tag=GCA000144955_01654;product=Uroporphyrinogen-III synthase;gene=hemD;Parent=GCA000144955_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1587,COG:H,RefSeq:WP_000805950.1,SO:0001217,UniParc:UPI0000054C1B,UniRef:UniRef100_Q2FXR2,UniRef:UniRef50_Q5HNN4,UniRef:UniRef90_A0A390VSB3
contig_1	Pyrodigal	gene	1735499	1736425	.	-	.	ID=GCA000144955_01655_gene;locus_tag=GCA000144955_01655;gene=hemC
contig_1	Pyrodigal	CDS	1735499	1736425	.	-	0	ID=GCA000144955_01655;Name=hydroxymethylbilane synthase;locus_tag=GCA000144955_01655;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0005737,GO:0006782,GO:0033014;gene=hemC;Parent=GCA000144955_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,RefSeq:WP_001230222.1,SO:0001217,UniParc:UPI0001DDA744,UniRef:UniRef100_UPI0001DDA744,UniRef:UniRef50_O34090,UniRef:UniRef90_O34090;ec_number=2.5.1.61
contig_1	Pyrodigal	gene	1736467	1737282	.	-	.	ID=GCA000144955_01656_gene;locus_tag=GCA000144955_01656;gene=ccmC
contig_1	Pyrodigal	CDS	1736467	1737282	.	-	0	ID=GCA000144955_01656;Name=Cytochrome c assembly protein domain-containing protein;locus_tag=GCA000144955_01656;product=Cytochrome c assembly protein domain-containing protein;gene=ccmC;Parent=GCA000144955_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0755,COG:O,KEGG:K02497,RefSeq:WP_001157329.1,SO:0001217,UniParc:UPI0000054C1D,UniRef:UniRef100_Q2FXR0,UniRef:UniRef50_Q2FXR0,UniRef:UniRef90_Q2FXR0
contig_1	Pyrodigal	gene	1737304	1738650	.	-	.	ID=GCA000144955_01657_gene;locus_tag=GCA000144955_01657;gene=hemA
contig_1	Pyrodigal	CDS	1737304	1738650	.	-	0	ID=GCA000144955_01657;Name=glutamyl-tRNA reductase;locus_tag=GCA000144955_01657;product=glutamyl-tRNA reductase;Dbxref=GO:0006782,GO:0008883,GO:0050661;gene=hemA;Parent=GCA000144955_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0373,COG:H,KEGG:K02492,RefSeq:WP_000545451.1,SO:0001217,UniParc:UPI000012C435,UniRef:UniRef100_Q2FG64,UniRef:UniRef50_Q65GJ9,UniRef:UniRef90_Q2FXQ9;ec_number=1.2.1.70
contig_1	Pyrodigal	gene	1738867	1739457	.	-	.	ID=GCA000144955_01658_gene;locus_tag=GCA000144955_01658;gene=yihA
contig_1	Pyrodigal	CDS	1738867	1739457	.	-	0	ID=GCA000144955_01658;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA000144955_01658;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0042254,GO:0043022,GO:0046872;gene=yihA;Parent=GCA000144955_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_000867698.1,SO:0001217,UniParc:UPI0001DDA745,UniRef:UniRef100_UPI0001DDA745,UniRef:UniRef50_Q2FXQ8,UniRef:UniRef90_Q2FXQ8
contig_1	Pyrodigal	gene	1739611	1740873	.	-	.	ID=GCA000144955_01659_gene;locus_tag=GCA000144955_01659;gene=clpX
contig_1	Pyrodigal	CDS	1739611	1740873	.	-	0	ID=GCA000144955_01659;Name=ATP-dependent Clp protease ATP-binding subunit ClpX;locus_tag=GCA000144955_01659;product=ATP-dependent Clp protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000144955_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_000472294.1,SO:0001217,UniParc:UPI0001DDA746,UniRef:UniRef100_UPI0001DDA746,UniRef:UniRef50_Q2FXQ7,UniRef:UniRef90_Q2FXQ7
contig_1	Pyrodigal	gene	1741024	1742325	.	-	.	ID=GCA000144955_01660_gene;locus_tag=GCA000144955_01660;gene=tig
contig_1	Pyrodigal	CDS	1741024	1742325	.	-	0	ID=GCA000144955_01660;Name=trigger factor;locus_tag=GCA000144955_01660;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000144955_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_000127572.1,SO:0001217,UniParc:UPI00003B1746,UniRef:UniRef100_Q6GG30,UniRef:UniRef50_P80698,UniRef:UniRef90_Q2FXQ6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1742488	1743417	.	-	.	ID=GCA000144955_01661_gene;locus_tag=GCA000144955_01661
contig_1	Pyrodigal	CDS	1742488	1743417	.	-	0	ID=GCA000144955_01661;Name=TPR domain protein;locus_tag=GCA000144955_01661;product=TPR domain protein;Parent=GCA000144955_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001280017.1,SO:0001217,UniParc:UPI0001DDA747,UniRef:UniRef100_UPI0001DDA747,UniRef:UniRef50_Q5HNM7,UniRef:UniRef90_A0A380E4T8
contig_1	Pyrodigal	gene	1743436	1744044	.	-	.	ID=GCA000144955_01662_gene;locus_tag=GCA000144955_01662;gene=ymaB
contig_1	Pyrodigal	CDS	1743436	1744044	.	-	0	ID=GCA000144955_01662;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000144955_01662;product=Nudix hydrolase domain-containing protein;gene=ymaB;Parent=GCA000144955_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4112,COG:R,RefSeq:WP_000032649.1,SO:0001217,UniParc:UPI0001DDA748,UniRef:UniRef100_UPI0001DDA748,UniRef:UniRef50_Q2FXQ3,UniRef:UniRef90_Q2FXQ3
contig_1	Pyrodigal	gene	1744186	1744542	.	-	.	ID=GCA000144955_01663_gene;locus_tag=GCA000144955_01663;gene=rplT
contig_1	Pyrodigal	CDS	1744186	1744542	.	-	0	ID=GCA000144955_01663;Name=50S ribosomal protein L20;locus_tag=GCA000144955_01663;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA000144955_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_001138360.1,SO:0001217,UniParc:UPI0000054C25,UniRef:UniRef100_Q2FXQ1,UniRef:UniRef50_P13070,UniRef:UniRef90_Q49YB0
contig_1	Pyrodigal	gene	1744589	1744789	.	-	.	ID=GCA000144955_01664_gene;locus_tag=GCA000144955_01664;gene=rpmI
contig_1	Pyrodigal	CDS	1744589	1744789	.	-	0	ID=GCA000144955_01664;Name=50S ribosomal protein L35;locus_tag=GCA000144955_01664;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA000144955_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0291,COG:J,KEGG:K02916,RefSeq:WP_001125540.1,SO:0001217,UniParc:UPI0000054C26,UniRef:UniRef100_Q2FXQ0,UniRef:UniRef50_P55874,UniRef:UniRef90_Q2FXQ0
contig_1	Pyrodigal	gene	1744818	1745378	.	-	.	ID=GCA000144955_01665_gene;locus_tag=GCA000144955_01665;gene=infC
contig_1	Pyrodigal	CDS	1744818	1745378	.	-	0	ID=GCA000144955_01665;Name=translation initiation factor IF-3;locus_tag=GCA000144955_01665;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0016020,GO:0032790,GO:0043022;gene=infC;Parent=GCA000144955_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0290,COG:J,SO:0001217,UniParc:UPI0001AB195A,UniRef:UniRef100_A0A0G2LSY7,UniRef:UniRef50_B9DNC6,UniRef:UniRef90_B9DNC6
contig_1	Infernal	regulatory_region	1745374	1745499	3e-12	-	.	ID=BPGLLONNDN_174;Name=Ribosomal protein L20 leader;product=Ribosomal protein L20 leader;Dbxref=RFAM:RF00558;inference=profile:Rfam:RF00558;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1745574	1747067	.	-	.	ID=GCA000144955_01666_gene;locus_tag=GCA000144955_01666;gene=lysP
contig_1	Pyrodigal	CDS	1745574	1747067	.	-	0	ID=GCA000144955_01666;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000144955_01666;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000144955_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,KEGG:K11733,RefSeq:WP_000049146.1,SO:0001217,UniParc:UPI0001DDA749,UniRef:UniRef100_UPI0001DDA749,UniRef:UniRef50_P25737,UniRef:UniRef90_Q2FXP8
contig_1	Infernal	regulatory_region	1747213	1747388	1.6e-17	-	.	ID=BPGLLONNDN_161;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1747494	1749431	.	-	.	ID=GCA000144955_01667_gene;locus_tag=GCA000144955_01667;gene=thrS
contig_1	Pyrodigal	CDS	1747494	1749431	.	-	0	ID=GCA000144955_01667;Name=threonine--tRNA ligase;locus_tag=GCA000144955_01667;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0006435,GO:0016740,GO:0046872;gene=thrS;Parent=GCA000144955_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_000435132.1,SO:0001217,UniParc:UPI0000030ADF,UniRef:UniRef100_Q2FG54,UniRef:UniRef50_P18255,UniRef:UniRef90_B9DNC9;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1749844	1750764	.	-	.	ID=GCA000144955_01668_gene;locus_tag=GCA000144955_01668;gene=dnaI
contig_1	Pyrodigal	CDS	1749844	1750764	.	-	0	ID=GCA000144955_01668;Name=primosomal protein DnaI;locus_tag=GCA000144955_01668;product=primosomal protein DnaI;gene=dnaI;Parent=GCA000144955_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1484,COG:L,RefSeq:WP_000808621.1,SO:0001217,UniParc:UPI00000CABBE,UniRef:UniRef100_Q2FXP5,UniRef:UniRef50_Q2FXP5,UniRef:UniRef90_Q2FXP5
contig_1	Pyrodigal	gene	1750764	1752164	.	-	.	ID=GCA000144955_01669_gene;locus_tag=GCA000144955_01669;gene=dnaB2
contig_1	Pyrodigal	CDS	1750764	1752164	.	-	0	ID=GCA000144955_01669;Name=DnaD domain-containing protein;locus_tag=GCA000144955_01669;product=DnaD domain-containing protein;gene=dnaB2;Parent=GCA000144955_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3611,COG:L,KEGG:K03346,RefSeq:WP_000533473.1,SO:0001217,UniParc:UPI0001DDA74A,UniRef:UniRef100_UPI0001DDA74A,UniRef:UniRef50_Q2FXP4,UniRef:UniRef90_Q2FXP4
contig_1	Pyrodigal	gene	1752165	1752635	.	-	.	ID=GCA000144955_01670_gene;locus_tag=GCA000144955_01670;gene=nrdR
contig_1	Pyrodigal	CDS	1752165	1752635	.	-	0	ID=GCA000144955_01670;Name=transcriptional regulator NrdR;locus_tag=GCA000144955_01670;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000144955_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_000650082.1,SO:0001217,UniParc:UPI0000054C2E,UniRef:UniRef100_Q2FXP3,UniRef:UniRef50_Q5M5X8,UniRef:UniRef90_Q2FXP3
contig_1	Pyrodigal	gene	1752844	1753869	.	-	.	ID=GCA000144955_01671_gene;locus_tag=GCA000144955_01671;gene=gap
contig_1	Pyrodigal	CDS	1752844	1753869	.	-	0	ID=GCA000144955_01671;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000144955_01671;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000144955_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000106134.1,SO:0001217,UniParc:UPI00003B174C,UniRef:UniRef100_Q6GG19,UniRef:UniRef50_Q6GG19,UniRef:UniRef90_Q5HF86;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1754039	1754662	.	-	.	ID=GCA000144955_01672_gene;locus_tag=GCA000144955_01672;gene=coaE
contig_1	Pyrodigal	CDS	1754039	1754662	.	-	0	ID=GCA000144955_01672;Name=dephospho-CoA kinase;locus_tag=GCA000144955_01672;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA000144955_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_001127171.1,SO:0001217,UniParc:UPI0001DDA74B,UniRef:UniRef100_A0A2S6D6X7,UniRef:UniRef50_Q49YB9,UniRef:UniRef90_Q2FG49;ec_number=2.7.1.24
contig_1	Pyrodigal	gene	1754678	1755550	.	-	.	ID=GCA000144955_01673_gene;locus_tag=GCA000144955_01673;gene=mutM
contig_1	Pyrodigal	CDS	1754678	1755550	.	-	0	ID=GCA000144955_01673;Name=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;locus_tag=GCA000144955_01673;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;Dbxref=GO:0003676,GO:0003684,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gene=mutM;Parent=GCA000144955_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K10563,RefSeq:WP_001114463.1,SO:0001217,UniParc:UPI0001DDA74C,UniRef:UniRef100_UPI0001DDA74C,UniRef:UniRef50_A0A7T1B1X4,UniRef:UniRef90_A0A811I2Z9;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1755566	1758196	.	-	.	ID=GCA000144955_01674_gene;locus_tag=GCA000144955_01674;gene=polA
contig_1	Pyrodigal	CDS	1755566	1758196	.	-	0	ID=GCA000144955_01674;Name=DNA polymerase I;locus_tag=GCA000144955_01674;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0008408;gene=polA;Parent=GCA000144955_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_001038309.1,SO:0001217,UniParc:UPI0001DDA74D,UniRef:UniRef100_UPI0001DDA74D,UniRef:UniRef50_K9B5S8,UniRef:UniRef90_A0AAJ4YWX0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1758489	1759976	.	-	.	ID=GCA000144955_01675_gene;locus_tag=GCA000144955_01675
contig_1	Pyrodigal	CDS	1758489	1759976	.	-	0	ID=GCA000144955_01675;Name=Glucosyltransferase;locus_tag=GCA000144955_01675;product=Glucosyltransferase;Parent=GCA000144955_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849432.1,SO:0001217,UniParc:UPI0001DDA74E,UniRef:UniRef100_UPI0001DDA74E,UniRef:UniRef50_Q2FXN8,UniRef:UniRef90_Q2FXN8
contig_1	Pyrodigal	gene	1760476	1762140	.	-	.	ID=GCA000144955_01676_gene;locus_tag=GCA000144955_01676;gene=pnpS
contig_1	Pyrodigal	CDS	1760476	1762140	.	-	0	ID=GCA000144955_01676;Name=two-component system histidine kinase PnpS;locus_tag=GCA000144955_01676;product=two-component system histidine kinase PnpS;Dbxref=GO:0000155,GO:0016310;gene=pnpS;Parent=GCA000144955_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,SO:0001217,UniRef:UniRef50_A0A380G833,UniRef:UniRef90_A0A7H9C746
contig_1	Pyrodigal	gene	1762137	1762841	.	-	.	ID=GCA000144955_01677_gene;locus_tag=GCA000144955_01677;gene=ompR
contig_1	Pyrodigal	CDS	1762137	1762841	.	-	0	ID=GCA000144955_01677;Name=Alkaline phosphatase synthesis transcriptional regulatory protein;locus_tag=GCA000144955_01677;product=Alkaline phosphatase synthesis transcriptional regulatory protein;gene=ompR;Parent=GCA000144955_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000080026.1,SO:0001217,UniParc:UPI00005FE584,UniRef:UniRef100_A0A0S3E1C9,UniRef:UniRef50_A0A9D3AXH1,UniRef:UniRef90_A0A0S3E1C9
contig_1	Pyrodigal	gene	1763230	1764498	.	-	.	ID=GCA000144955_01678_gene;locus_tag=GCA000144955_01678;gene=icd
contig_1	Pyrodigal	CDS	1763230	1764498	.	-	0	ID=GCA000144955_01678;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000144955_01678;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0006097,GO:0006099,GO:0051287;gene=icd;Parent=GCA000144955_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,RefSeq:WP_000123175.1,SO:0001217,UniParc:UPI000175C2E1,UniRef:UniRef100_A0A2S6D6W6,UniRef:UniRef50_Q5HNL1,UniRef:UniRef90_Q8NW61;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	1764547	1765668	.	-	.	ID=GCA000144955_01679_gene;locus_tag=GCA000144955_01679;gene=gltA
contig_1	Pyrodigal	CDS	1764547	1765668	.	-	0	ID=GCA000144955_01679;Name=citrate synthase;locus_tag=GCA000144955_01679;product=citrate synthase;gene=gltA;Parent=GCA000144955_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,RefSeq:WP_000829167.1,SO:0001217,UniParc:UPI00000D76BC,UniRef:UniRef100_W8U5A3,UniRef:UniRef50_P39120,UniRef:UniRef90_W8U5A3
contig_1	Pyrodigal	gene	1766016	1767377	.	+	.	ID=GCA000144955_01680_gene;locus_tag=GCA000144955_01680;gene=ansP
contig_1	Pyrodigal	CDS	1766016	1767377	.	+	0	ID=GCA000144955_01680;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000144955_01680;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000144955_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000818530.1,SO:0001217,UniParc:UPI0001DDA751,UniRef:UniRef100_UPI0001DDA751,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_Q2FXN2
contig_1	Pyrodigal	gene	1767724	1769481	.	-	.	ID=GCA000144955_01681_gene;locus_tag=GCA000144955_01681;gene=pyk
contig_1	Pyrodigal	CDS	1767724	1769481	.	-	0	ID=GCA000144955_01681;Name=pyruvate kinase;locus_tag=GCA000144955_01681;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000144955_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3848,COG:T,KEGG:K00873,RefSeq:WP_001232650.1,SO:0001217,UniParc:UPI00005FE587,UniRef:UniRef100_Q2YTE3,UniRef:UniRef50_Q02499,UniRef:UniRef90_Q2FXM9;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1769503	1770471	.	-	.	ID=GCA000144955_01682_gene;locus_tag=GCA000144955_01682;gene=pfkA
contig_1	Pyrodigal	CDS	1769503	1770471	.	-	0	ID=GCA000144955_01682;Name=6-phosphofructokinase;locus_tag=GCA000144955_01682;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0016208,GO:0030388,GO:0042802,GO:0046872,GO:0048029,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000144955_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,KEGG:K00850,RefSeq:WP_000717561.1,SO:0001217,UniParc:UPI0000054C39,UniRef:UniRef100_Q2FXM8,UniRef:UniRef50_Q2FXM8,UniRef:UniRef90_Q2FXM8;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	1770740	1771684	.	-	.	ID=GCA000144955_01683_gene;locus_tag=GCA000144955_01683;gene=accA
contig_1	Pyrodigal	CDS	1770740	1771684	.	-	0	ID=GCA000144955_01683;Name=acetyl-CoA carboxylase carboxyltransferase subunit alpha;locus_tag=GCA000144955_01683;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0009317,GO:0016743,GO:2001295;gene=accA;Parent=GCA000144955_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_000883646.1,SO:0001217,UniParc:UPI00003B1757,UniRef:UniRef100_Q6GG07,UniRef:UniRef50_Q9HXZ2,UniRef:UniRef90_Q2FXM7;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1771684	1772541	.	-	.	ID=GCA000144955_01684_gene;locus_tag=GCA000144955_01684;gene=accD
contig_1	Pyrodigal	CDS	1771684	1772541	.	-	0	ID=GCA000144955_01684;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA000144955_01684;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0008270,GO:0009317,GO:0016743,GO:2001295;gene=accD;Parent=GCA000144955_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_000471571.1,SO:0001217,UniParc:UPI0000054C3B,UniRef:UniRef100_Q2FXM6,UniRef:UniRef50_C0SP93,UniRef:UniRef90_Q2FXM6;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1772736	1773965	.	-	.	ID=GCA000144955_01685_gene;locus_tag=GCA000144955_01685;gene=sfcA
contig_1	Pyrodigal	CDS	1772736	1773965	.	-	0	ID=GCA000144955_01685;Name=NADP-dependent malic enzyme (Conversion of malate into pyruvate);locus_tag=GCA000144955_01685;product=NADP-dependent malic enzyme (Conversion of malate into pyruvate);gene=sfcA;Parent=GCA000144955_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_000058389.1,SO:0001217,UniParc:UPI00000D7686,UniRef:UniRef100_A0A7Z7QZK8,UniRef:UniRef50_A0A2U3KL65,UniRef:UniRef90_A0A7U7PYW9
contig_1	Pyrodigal	gene	1774415	1777612	.	-	.	ID=GCA000144955_01686_gene;locus_tag=GCA000144955_01686;gene=dnaE
contig_1	Pyrodigal	CDS	1774415	1777612	.	-	0	ID=GCA000144955_01686;Name=DNA polymerase III subunit alpha;locus_tag=GCA000144955_01686;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA000144955_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,RefSeq:WP_000226940.1,SO:0001217,UniParc:UPI0001DDA908,UniRef:UniRef100_UPI0001DDA908,UniRef:UniRef50_Q9F1K0,UniRef:UniRef90_Q9F1K0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1777633	1778574	.	-	.	ID=GCA000144955_01687_gene;locus_tag=GCA000144955_01687;gene=pde2
contig_1	Pyrodigal	CDS	1777633	1778574	.	-	0	ID=GCA000144955_01687;Name=pApA hydrolase Pde2;locus_tag=GCA000144955_01687;product=pApA hydrolase Pde2;gene=pde2;Parent=GCA000144955_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000626074,COG:COG0618,COG:FT,KEGG:K06881,RefSeq:WP_000626084.1,SO:0001217,UniParc:UPI0001DDA909,UniRef:UniRef100_UPI0001DDA909,UniRef:UniRef50_A0A7U7JV59,UniRef:UniRef90_A0A0U1MNX7;ec_number=3.1.3.7
contig_1	Infernal	gene	1778723	1778992	.	-	.	ID=GCA000144955_01688_gene;locus_tag=GCA000144955_01688;gene=S35
contig_1	Infernal	ncRNA	1778723	1778992	4.4e-12	-	.	ID=GCA000144955_01688;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01688;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01688_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1779027	1780325	.	-	.	ID=GCA000144955_01689_gene;locus_tag=GCA000144955_01689;gene=ytoI
contig_1	Pyrodigal	CDS	1779027	1780325	.	-	0	ID=GCA000144955_01689;Name=CBS domain-containing protein;locus_tag=GCA000144955_01689;product=CBS domain-containing protein;gene=ytoI;Parent=GCA000144955_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4109,COG:K,RefSeq:WP_000160435.1,SO:0001217,UniParc:UPI0000054C3F,UniRef:UniRef100_Q2FXM2,UniRef:UniRef50_A0A7U7JV62,UniRef:UniRef90_A0A7U7JV62
contig_1	Pyrodigal	gene	1780530	1780943	.	+	.	ID=GCA000144955_01690_gene;locus_tag=GCA000144955_01690;gene=uspA
contig_1	Pyrodigal	CDS	1780530	1780943	.	+	0	ID=GCA000144955_01690;Name=UspA domain-containing protein;locus_tag=GCA000144955_01690;product=UspA domain-containing protein;gene=uspA;Parent=GCA000144955_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000277602.1,SO:0001217,UniParc:UPI00000D7756,UniRef:UniRef100_Q2FXM1,UniRef:UniRef50_Q2FXM1,UniRef:UniRef90_Q2FXM1
contig_1	Pyrodigal	gene	1781448	1782137	.	-	.	ID=GCA000144955_01691_gene;locus_tag=GCA000144955_01691;gene=ulaG
contig_1	Pyrodigal	CDS	1781448	1782137	.	-	0	ID=GCA000144955_01691;Name=metal-dependent hydrolase;locus_tag=GCA000144955_01691;product=metal-dependent hydrolase;Dbxref=GO:0016787;gene=ulaG;Parent=GCA000144955_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,RefSeq:WP_000777188.1,SO:0001217,UniParc:UPI000013B147,UniRef:UniRef100_Q2FXM0,UniRef:UniRef50_Q2FXM0,UniRef:UniRef90_Q2FXM0
contig_1	Pyrodigal	gene	1782312	1783367	.	+	.	ID=GCA000144955_01692_gene;locus_tag=GCA000144955_01692;gene=pepP
contig_1	Pyrodigal	CDS	1782312	1783367	.	+	0	ID=GCA000144955_01692;Name=putative peptidase SAUSA300_1654;locus_tag=GCA000144955_01692;product=putative peptidase SAUSA300_1654;Dbxref=GO:0016787,GO:0046872;gene=pepP;Parent=GCA000144955_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,RefSeq:WP_000161655.1,SO:0001217,UniParc:UPI0001DDA90B,UniRef:UniRef100_UPI0001DDA90B,UniRef:UniRef50_Q7A552,UniRef:UniRef90_Q7A552;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1783683	1784801	.	-	.	ID=GCA000144955_01693_gene;locus_tag=GCA000144955_01693;gene=ald
contig_1	Pyrodigal	CDS	1783683	1784801	.	-	0	ID=GCA000144955_01693;Name=alanine dehydrogenase;locus_tag=GCA000144955_01693;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000144955_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000689998.1,SO:0001217,UniParc:UPI00000D9E81,UniRef:UniRef100_Q2FXL7,UniRef:UniRef50_P17556,UniRef:UniRef90_Q2FXL7;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1784942	1785442	.	+	.	ID=GCA000144955_01694_gene;locus_tag=GCA000144955_01694;gene=uspA
contig_1	Pyrodigal	CDS	1784942	1785442	.	+	0	ID=GCA000144955_01694;Name=Putative universal stress protein MW1653;locus_tag=GCA000144955_01694;product=Putative universal stress protein MW1653;Dbxref=GO:0005737;gene=uspA;Parent=GCA000144955_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000634175.1,SO:0001217,UniParc:UPI0000054C46,UniRef:UniRef100_Q2FXL6,UniRef:UniRef50_Q2FXL6,UniRef:UniRef90_Q2FXL6
contig_1	Pyrodigal	gene	1785688	1786890	.	-	.	ID=GCA000144955_01695_gene;locus_tag=GCA000144955_01695;gene=ackA
contig_1	Pyrodigal	CDS	1785688	1786890	.	-	0	ID=GCA000144955_01695;Name=Acetate kinase;locus_tag=GCA000144955_01695;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA000144955_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_000040069.1,SO:0001217,UniParc:UPI000012529B,UniRef:UniRef100_Q2FXL5,UniRef:UniRef50_O52594,UniRef:UniRef90_Q2FXL5;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	1786978	1787925	.	-	.	ID=GCA000144955_01696_gene;locus_tag=GCA000144955_01696;gene=ytxK
contig_1	Pyrodigal	CDS	1786978	1787925	.	-	0	ID=GCA000144955_01696;Name=Adenine-specific methyltransferase;locus_tag=GCA000144955_01696;product=Adenine-specific methyltransferase;gene=ytxK;Parent=GCA000144955_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0827,COG:L,RefSeq:WP_000840576.1,SO:0001217,UniParc:UPI00000CAC45,UniRef:UniRef100_A0A7U7IFQ3,UniRef:UniRef50_B9DN82,UniRef:UniRef90_A0A077UL38
contig_1	Pyrodigal	gene	1788048	1788542	.	-	.	ID=GCA000144955_01697_gene;locus_tag=GCA000144955_01697;gene=tpx
contig_1	Pyrodigal	CDS	1788048	1788542	.	-	0	ID=GCA000144955_01697;Name=thiol peroxidase;locus_tag=GCA000144955_01697;product=thiol peroxidase;Dbxref=GO:0008379,GO:0016684;gene=tpx;Parent=GCA000144955_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_000136258.1,SO:0001217,UniParc:UPI0001DDA90C,UniRef:UniRef100_UPI0001DDA90C,UniRef:UniRef50_P80864,UniRef:UniRef90_P66954;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1788640	1789410	.	-	.	ID=GCA000144955_01698_gene;locus_tag=GCA000144955_01698;gene=tauE
contig_1	Pyrodigal	CDS	1788640	1789410	.	-	0	ID=GCA000144955_01698;Name=putative membrane transporter protein;locus_tag=GCA000144955_01698;product=putative membrane transporter protein;gene=tauE;Parent=GCA000144955_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000365324.1,SO:0001217,UniParc:UPI00000D9E83,UniRef:UniRef100_A0A6B2ILW0,UniRef:UniRef50_A0A239TZL2,UniRef:UniRef90_A0A391DGZ3
contig_1	Pyrodigal	gene	1789454	1790677	.	-	.	ID=GCA000144955_01699_gene;locus_tag=GCA000144955_01699;gene=thiI
contig_1	Pyrodigal	CDS	1789454	1790677	.	-	0	ID=GCA000144955_01699;Name=putative tRNA sulfurtransferase;locus_tag=GCA000144955_01699;product=putative tRNA sulfurtransferase;Dbxref=GO:0000049,GO:0002937,GO:0004810,GO:0005524,GO:0005829,GO:0009228,GO:0009229,GO:0052837,GO:0140741;gene=thiI;Parent=GCA000144955_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0301,COG:HJ,KEGG:K03151,RefSeq:WP_000872665.1,SO:0001217,UniParc:UPI00005FE592,UniRef:UniRef100_Q2YTF0,UniRef:UniRef50_Q2FXL1,UniRef:UniRef90_Q2FXL1;ec_number=2.8.1.4
contig_1	Pyrodigal	gene	1790677	1791843	.	-	.	ID=GCA000144955_01700_gene;locus_tag=GCA000144955_01700;gene=nifS
contig_1	Pyrodigal	CDS	1790677	1791843	.	-	0	ID=GCA000144955_01700;Name=Aminotransferase;locus_tag=GCA000144955_01700;product=Aminotransferase;gene=nifS;Parent=GCA000144955_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,SO:0001217,UniRef:UniRef50_A0A0D6HH30,UniRef:UniRef90_A0A0D6HH30
contig_1	Pyrodigal	gene	1792155	1793849	.	-	.	ID=GCA000144955_01701_gene;locus_tag=GCA000144955_01701;gene=ezrA
contig_1	Pyrodigal	CDS	1792155	1793849	.	-	0	ID=GCA000144955_01701;Name=septation ring formation regulator EzrA;locus_tag=GCA000144955_01701;product=septation ring formation regulator EzrA;Dbxref=GO:0000917,GO:0000921,GO:0005886,GO:0005940;gene=ezrA;Parent=GCA000144955_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4477,COG:D,KEGG:K06286,RefSeq:WP_000244865.1,SO:0001217,UniParc:UPI0000054C4F,UniRef:UniRef100_Q2FG20,UniRef:UniRef50_Q5HNI8,UniRef:UniRef90_P64002
contig_1	Pyrodigal	gene	1793986	1794450	.	+	.	ID=GCA000144955_01702_gene;locus_tag=GCA000144955_01702;gene=msrC
contig_1	Pyrodigal	CDS	1793986	1794450	.	+	0	ID=GCA000144955_01702;Name=GAF domain-containing protein;locus_tag=GCA000144955_01702;product=GAF domain-containing protein;gene=msrC;Parent=GCA000144955_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1956,COG:VT,RefSeq:WP_000207850.1,SO:0001217,UniParc:UPI0001DDA90E,UniRef:UniRef100_UPI0001DDA90E,UniRef:UniRef50_A0A0A5FWD3,UniRef:UniRef90_A0A0U1MMX1
contig_1	Pyrodigal	gene	1794694	1795296	.	+	.	ID=GCA000144955_01703_gene;locus_tag=GCA000144955_01703;gene=rpsD
contig_1	Pyrodigal	CDS	1794694	1795296	.	+	0	ID=GCA000144955_01703;Name=30S ribosomal protein S4;locus_tag=GCA000144955_01703;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000144955_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_000090512.1,SO:0001217,UniParc:UPI0000135022,UniRef:UniRef100_Q2FXK6,UniRef:UniRef50_P21466,UniRef:UniRef90_Q2FXK6
contig_1	Pyrodigal	gene	1795512	1796255	.	-	.	ID=GCA000144955_01704_gene;locus_tag=GCA000144955_01704;gene=ugpQ
contig_1	Pyrodigal	CDS	1795512	1796255	.	-	0	ID=GCA000144955_01704;Name=GP-PDE domain-containing protein;locus_tag=GCA000144955_01704;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000144955_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000174271.1,SO:0001217,UniParc:UPI0001DDA90F,UniRef:UniRef100_UPI0001DDA90F,UniRef:UniRef50_Q2FXK4,UniRef:UniRef90_Q2FXK4;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1796335	1796781	.	+	.	ID=GCA000144955_01705_gene;locus_tag=GCA000144955_01705;gene=osmC
contig_1	Pyrodigal	CDS	1796335	1796781	.	+	0	ID=GCA000144955_01705;Name=Organic hydroperoxide resistance protein;locus_tag=GCA000144955_01705;product=Organic hydroperoxide resistance protein;gene=osmC;Parent=GCA000144955_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,RefSeq:WP_000553924.1,SO:0001217,UniParc:UPI00000CAB05,UniRef:UniRef100_A0A0D1JRC2,UniRef:UniRef50_B9DN81,UniRef:UniRef90_A0A0D1JRC2
contig_1	Pyrodigal	gene	1796896	1798056	.	+	.	ID=GCA000144955_01706_gene;locus_tag=GCA000144955_01706;gene=pucG
contig_1	Pyrodigal	CDS	1796896	1798056	.	+	0	ID=GCA000144955_01706;Name=Aminotransferase class V domain-containing protein;locus_tag=GCA000144955_01706;product=Aminotransferase class V domain-containing protein;gene=pucG;Parent=GCA000144955_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0075,COG:EF,RefSeq:WP_000291426.1,SO:0001217,UniParc:UPI00003B1769,UniRef:UniRef100_A0A7Z7W2C5,UniRef:UniRef50_Q2FXK2,UniRef:UniRef90_Q2FXK2
contig_1	Pyrodigal	gene	1798043	1799647	.	+	.	ID=GCA000144955_01707_gene;locus_tag=GCA000144955_01707;gene=serA
contig_1	Pyrodigal	CDS	1798043	1799647	.	+	0	ID=GCA000144955_01707;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000144955_01707;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0006564;gene=serA;Parent=GCA000144955_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,RefSeq:WP_000808837.1,SO:0001217,UniParc:UPI00003B176A,UniRef:UniRef100_A0A7Z7W1Y4,UniRef:UniRef50_B9DN70,UniRef:UniRef90_A0A3A5LA45;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	1799797	1800927	.	-	.	ID=GCA000144955_01708_gene;locus_tag=GCA000144955_01708;gene=gph
contig_1	Pyrodigal	CDS	1799797	1800927	.	-	0	ID=GCA000144955_01708;Name=HAD family hydrolase;locus_tag=GCA000144955_01708;product=HAD family hydrolase;gene=gph;Parent=GCA000144955_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000721715.1,SO:0001217,UniParc:UPI0001DDA910,UniRef:UniRef100_UPI0001DDA910,UniRef:UniRef50_A0A6N3EB75,UniRef:UniRef90_A0A389U3P7
contig_1	Pyrodigal	gene	1801034	1802500	.	-	.	ID=GCA000144955_01709_gene;locus_tag=GCA000144955_01709;gene=ptsG2
contig_1	Pyrodigal	CDS	1801034	1802500	.	-	0	ID=GCA000144955_01709;Name=N-acetylglucosamine-specific PTS transporter subunit IIBC;locus_tag=GCA000144955_01709;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000144955_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000276352.1,SO:0001217,UniParc:UPI0001DDA911,UniRef:UniRef100_UPI0001DDA911,UniRef:UniRef50_A0A2Y2SMF5,UniRef:UniRef90_A0A2Y2SMF5
contig_1	Pyrodigal	gene	1802628	1803245	.	-	.	ID=GCA000144955_01710_gene;locus_tag=GCA000144955_01710;gene=plsC
contig_1	Pyrodigal	CDS	1802628	1803245	.	-	0	ID=GCA000144955_01710;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA000144955_01710;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;gene=plsC;Parent=GCA000144955_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_000287588.1,SO:0001217,UniParc:UPI0000054395,UniRef:UniRef100_Q2FXJ7,UniRef:UniRef50_A0A1D4JQG0,UniRef:UniRef90_A0A2K4AFG9
contig_1	Pyrodigal	gene	1803417	1804691	.	+	.	ID=GCA000144955_01711_gene;locus_tag=GCA000144955_01711;gene=degQ
contig_1	Pyrodigal	CDS	1803417	1804691	.	+	0	ID=GCA000144955_01711;Name=Serine protease HtrA-like;locus_tag=GCA000144955_01711;product=Serine protease HtrA-like;gene=degQ;Parent=GCA000144955_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_001279338.1,SO:0001217,UniParc:UPI000005224B,UniRef:UniRef100_Q2FXJ6,UniRef:UniRef50_A0A380HKD8,UniRef:UniRef90_A0A2K4AFG2
contig_1	Pyrodigal	gene	1804785	1806047	.	-	.	ID=GCA000144955_01712_gene;locus_tag=GCA000144955_01712;gene=tyrS
contig_1	Pyrodigal	CDS	1804785	1806047	.	-	0	ID=GCA000144955_01712;Name=tyrosine--tRNA ligase;locus_tag=GCA000144955_01712;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437;gene=tyrS;Parent=GCA000144955_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_000186029.1,SO:0001217,UniParc:UPI000002E8ED,UniRef:UniRef100_Q2FXJ5,UniRef:UniRef50_Q2FXJ5,UniRef:UniRef90_Q2FXJ5;ec_number=6.1.1.1
contig_1	Pyrodigal	gene	1806428	1807333	.	+	.	ID=GCA000144955_01713_gene;locus_tag=GCA000144955_01713;gene=mrcB
contig_1	Pyrodigal	CDS	1806428	1807333	.	+	0	ID=GCA000144955_01713;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000144955_01713;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000144955_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K12551,RefSeq:WP_000184370.1,SO:0001217,UniParc:UPI0000054394,UniRef:UniRef100_Q2FXJ4,UniRef:UniRef50_G5JFR8,UniRef:UniRef90_A0A6B0D5L6;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1807539	1810220	.	-	.	ID=GCA000144955_01714_gene;locus_tag=GCA000144955_01714;gene=harA
contig_1	Pyrodigal	CDS	1807539	1810220	.	-	0	ID=GCA000144955_01714;Name=haptoglobin-binding heme uptake protein HarA;locus_tag=GCA000144955_01714;product=haptoglobin-binding heme uptake protein HarA;gene=harA;Parent=GCA000144955_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FXJ2,VFDB:VFC0272,VFDB:VFG044443
contig_1	Infernal	gene	1810274	1810334	.	+	.	ID=GCA000144955_01715_gene;locus_tag=GCA000144955_01715;gene=rsaB
contig_1	Infernal	ncRNA	1810274	1810334	1.7e-13	+	.	ID=GCA000144955_01715;Name=RNA Staph. aureus A;locus_tag=GCA000144955_01715;gene=rsaB;product=RNA Staph. aureus A;Dbxref=RFAM:RF01817;Parent=GCA000144955_01715_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01817
contig_1	Pyrodigal	gene	1810553	1812298	.	-	.	ID=GCA000144955_01716_gene;locus_tag=GCA000144955_01716;gene=fhs
contig_1	Pyrodigal	CDS	1810553	1812298	.	-	0	ID=GCA000144955_01716;Name=formate--tetrahydrofolate ligase;locus_tag=GCA000144955_01716;product=formate--tetrahydrofolate ligase;Dbxref=GO:0004329,GO:0005524,GO:0035999;gene=fhs;Parent=GCA000144955_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2759,COG:F,SO:0001217,UniRef:UniRef50_Q5HF42,UniRef:UniRef90_Q5HF42;ec_number=6.3.4.3
contig_1	Pyrodigal	gene	1812660	1814366	.	-	.	ID=GCA000144955_01717_gene;locus_tag=GCA000144955_01717;gene=acsA
contig_1	Pyrodigal	CDS	1812660	1814366	.	-	0	ID=GCA000144955_01717;Name=acetate--CoA ligase;locus_tag=GCA000144955_01717;product=acetate--CoA ligase;gene=acsA;Parent=GCA000144955_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000862108.1,SO:0001217,UniParc:UPI0001DDA914,UniRef:UniRef100_UPI0001DDA914,UniRef:UniRef50_P39062,UniRef:UniRef90_A0AAE2ZVA8;ec_number=6.2.1.1
contig_1	Pyrodigal	gene	1814535	1815167	.	+	.	ID=GCA000144955_01718_gene;locus_tag=GCA000144955_01718
contig_1	Pyrodigal	CDS	1814535	1815167	.	+	0	ID=GCA000144955_01718;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_01718;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04766,RefSeq:WP_001015989.1,SO:0001217,UniParc:UPI0001DDAA9F,UniRef:UniRef100_A0A380E488,UniRef:UniRef50_P39065,UniRef:UniRef90_Q2G293;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1815192	1816361	.	+	.	ID=GCA000144955_01719_gene;locus_tag=GCA000144955_01719;gene=acuC
contig_1	Pyrodigal	CDS	1815192	1816361	.	+	0	ID=GCA000144955_01719;Name=Acetoin utilization protein AcuC;locus_tag=GCA000144955_01719;product=Acetoin utilization protein AcuC;Dbxref=GO:0004407,GO:0040029,GO:0045150;gene=acuC;Parent=GCA000144955_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0123,COG:Q,RefSeq:WP_001184008.1,SO:0001217,UniParc:UPI0001AE84FF,UniRef:UniRef100_A0A7Z8DCS5,UniRef:UniRef50_P64375,UniRef:UniRef90_P64375
contig_1	Pyrodigal	gene	1816459	1817448	.	-	.	ID=GCA000144955_01720_gene;locus_tag=GCA000144955_01720;gene=ccpA
contig_1	Pyrodigal	CDS	1816459	1817448	.	-	0	ID=GCA000144955_01720;Name=catabolite control protein A;locus_tag=GCA000144955_01720;product=catabolite control protein A;Dbxref=GO:0000976,GO:0001228,GO:0003677,GO:0003700,GO:0005975,GO:0006355;gene=ccpA;Parent=GCA000144955_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000219064.1,SO:0001217,UniParc:UPI00005FE5A4,UniRef:UniRef100_A0A2S6D6Y1,UniRef:UniRef50_Q5HNH3,UniRef:UniRef90_Q5HF38
contig_1	Pyrodigal	gene	1817988	1819079	.	-	.	ID=GCA000144955_01721_gene;locus_tag=GCA000144955_01721;gene=aroGA
contig_1	Pyrodigal	CDS	1817988	1819079	.	-	0	ID=GCA000144955_01721;Name=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;locus_tag=GCA000144955_01721;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;Dbxref=GO:0003824,GO:0009073,GO:0046417;gene=aroGA;Parent=GCA000144955_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2876,COG:E,KEGG:K13853,SO:0001217,UniRef:UniRef50_P39912,UniRef:UniRef90_A0A7U7JV80;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1819775	1821139	.	-	.	ID=GCA000144955_01722_gene;locus_tag=GCA000144955_01722
contig_1	Pyrodigal	CDS	1819775	1821139	.	-	0	ID=GCA000144955_01722;Name=Maebl;locus_tag=GCA000144955_01722;product=Maebl;Parent=GCA000144955_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_103246005.1,SO:0001217,UniParc:UPI000CD31A76,UniRef:UniRef100_UPI000CD31A76,UniRef:UniRef50_A0A0H2XJG9,UniRef:UniRef90_UPI000CD31A76
contig_1	Pyrodigal	gene	1821213	1821704	.	-	.	ID=GCA000144955_01723_gene;locus_tag=GCA000144955_01723
contig_1	Pyrodigal	CDS	1821213	1821704	.	-	0	ID=GCA000144955_01723;Name=UPF0478 protein MW1682;locus_tag=GCA000144955_01723;product=UPF0478 protein MW1682;Dbxref=GO:0005886;Parent=GCA000144955_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4768,COG:S,RefSeq:WP_000383814.1,SO:0001217,UniParc:UPI0000054388,UniRef:UniRef100_Q2G247,UniRef:UniRef50_Q49YH0,UniRef:UniRef90_Q2G247
contig_1	Pyrodigal	gene	1821778	1823091	.	-	.	ID=GCA000144955_01724_gene;locus_tag=GCA000144955_01724;gene=murC
contig_1	Pyrodigal	CDS	1821778	1823091	.	-	0	ID=GCA000144955_01724;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000144955_01724;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000144955_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_000150169.1,SO:0001217,UniParc:UPI000012F972,UniRef:UniRef100_P65474,UniRef:UniRef50_Q2FXJ0,UniRef:UniRef90_Q2FXJ0;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	1823115	1826939	.	-	.	ID=GCA000144955_01725_gene;locus_tag=GCA000144955_01725;gene=ftsK
contig_1	Pyrodigal	CDS	1823115	1826939	.	-	0	ID=GCA000144955_01725;Name=FtsK domain-containing protein;locus_tag=GCA000144955_01725;product=FtsK domain-containing protein;gene=ftsK;Parent=GCA000144955_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_000118298.1,SO:0001217,UniParc:UPI0001DDAAA2,UniRef:UniRef100_UPI0001DDAAA2,UniRef:UniRef50_A0A151A4B2,UniRef:UniRef90_Q2FXI9
contig_1	Pyrodigal	gene	1826960	1827556	.	-	.	ID=GCA000144955_01726_gene;locus_tag=GCA000144955_01726;gene=ytpR
contig_1	Pyrodigal	CDS	1826960	1827556	.	-	0	ID=GCA000144955_01726;Name=YtpR family tRNA-binding protein;locus_tag=GCA000144955_01726;product=YtpR family tRNA-binding protein;gene=ytpR;Parent=GCA000144955_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,RefSeq:WP_001048371.1,SO:0001217,UniParc:UPI0001B700A3,UniRef:UniRef100_A0A2S6DGF7,UniRef:UniRef50_O34943,UniRef:UniRef90_A0A2S6DGF7
contig_1	Pyrodigal	gene	1827585	1828442	.	-	.	ID=GCA000144955_01727_gene;locus_tag=GCA000144955_01727;gene=ytpQ
contig_1	Pyrodigal	CDS	1827585	1828442	.	-	0	ID=GCA000144955_01727;Name=UPF0354 protein SA1564;locus_tag=GCA000144955_01727;product=UPF0354 protein SA1564;gene=ytpQ;Parent=GCA000144955_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4848,COG:R,RefSeq:WP_001091387.1,SO:0001217,UniParc:UPI00000CAE0C,UniRef:UniRef100_Q2FXI7,UniRef:UniRef50_Q2FXI7,UniRef:UniRef90_Q2FXI7
contig_1	Pyrodigal	gene	1828542	1828853	.	-	.	ID=GCA000144955_01728_gene;locus_tag=GCA000144955_01728;gene=cnoX
contig_1	Pyrodigal	CDS	1828542	1828853	.	-	0	ID=GCA000144955_01728;Name=Thioredoxin domain-containing protein;locus_tag=GCA000144955_01728;product=Thioredoxin domain-containing protein;gene=cnoX;Parent=GCA000144955_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_000811163.1,SO:0001217,UniParc:UPI0000054384,UniRef:UniRef100_Q2FXI6,UniRef:UniRef50_A0A380G846,UniRef:UniRef90_Q2FXI6
contig_1	Pyrodigal	gene	1828918	1829994	.	-	.	ID=GCA000144955_01729_gene;locus_tag=GCA000144955_01729;gene=frvX
contig_1	Pyrodigal	CDS	1828918	1829994	.	-	0	ID=GCA000144955_01729;Name=Glutamyl aminopeptidase Deblocking aminopeptidase;locus_tag=GCA000144955_01729;product=Glutamyl aminopeptidase Deblocking aminopeptidase;gene=frvX;Parent=GCA000144955_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001024579.1,SO:0001217,UniParc:UPI0001DDAAA3,UniRef:UniRef100_UPI0001DDAAA3,UniRef:UniRef50_A0A0D1GA35,UniRef:UniRef90_A0A0D1GA35
contig_1	Pyrodigal	gene	1830078	1830392	.	+	.	ID=GCA000144955_01730_gene;locus_tag=GCA000144955_01730
contig_1	Pyrodigal	CDS	1830078	1830392	.	+	0	ID=GCA000144955_01730;Name=PepSY domain-containing protein;locus_tag=GCA000144955_01730;product=PepSY domain-containing protein;Parent=GCA000144955_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5584,COG:S,SO:0001217,UniParc:UPI00006E3DDC,UniRef:UniRef100_Q2FXI4,UniRef:UniRef50_Q2FXI4,UniRef:UniRef90_Q2FXI4
contig_1	Pyrodigal	gene	1830517	1831359	.	-	.	ID=GCA000144955_01731_gene;locus_tag=GCA000144955_01731;gene=gloB
contig_1	Pyrodigal	CDS	1830517	1831359	.	-	0	ID=GCA000144955_01731;Name=Metal-dependent hydrolase;locus_tag=GCA000144955_01731;product=Metal-dependent hydrolase;gene=gloB;Parent=GCA000144955_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_000689582.1,SO:0001217,UniParc:UPI00000CAAF8,UniRef:UniRef100_A0A7U7EYX5,UniRef:UniRef50_A0A077US04,UniRef:UniRef90_A0A077US04
contig_1	Infernal	gene	1831626	1831684	.	+	.	ID=GCA000144955_01732_gene;locus_tag=GCA000144955_01732;gene=sau-5949
contig_1	Infernal	ncRNA	1831626	1831684	2.1e-12	+	.	ID=GCA000144955_01732;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000144955_01732;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000144955_01732_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1831831	1832475	.	-	.	ID=GCA000144955_01733_gene;locus_tag=GCA000144955_01733;gene=trmB
contig_1	Pyrodigal	CDS	1831831	1832475	.	-	0	ID=GCA000144955_01733;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000144955_01733;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176,GO:0043527;gene=trmB;Parent=GCA000144955_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0220,COG:J,RefSeq:WP_001266156.1,SO:0001217,UniParc:UPI0001DDAAA4,UniRef:UniRef100_UPI0001DDAAA4,UniRef:UniRef50_Q2FXI2,UniRef:UniRef90_Q2FXI2;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	1832490	1833281	.	-	.	ID=GCA000144955_01734_gene;locus_tag=GCA000144955_01734;gene=cotS
contig_1	Pyrodigal	CDS	1832490	1833281	.	-	0	ID=GCA000144955_01734;Name=Aminoglycoside phosphotransferase domain-containing protein;locus_tag=GCA000144955_01734;product=Aminoglycoside phosphotransferase domain-containing protein;gene=cotS;Parent=GCA000144955_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0510,COG:H,RefSeq:WP_000434769.1,SO:0001217,UniParc:UPI0001C0BBA3,UniRef:UniRef100_A0A0D1IEK1,UniRef:UniRef50_I3ECD2,UniRef:UniRef90_Q2FXI1
contig_1	Pyrodigal	gene	1833832	1834680	.	-	.	ID=GCA000144955_01735_gene;locus_tag=GCA000144955_01735;gene=dat
contig_1	Pyrodigal	CDS	1833832	1834680	.	-	0	ID=GCA000144955_01735;Name=D-amino-acid transaminase;locus_tag=GCA000144955_01735;product=D-amino-acid transaminase;Dbxref=GO:0005829,GO:0019478,GO:0019480,GO:0030170,GO:0046416,GO:0046437,GO:0047810;gene=dat;Parent=GCA000144955_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00824,RefSeq:WP_000411088.1,SO:0001217,UniParc:UPI0001DDAAA5,UniRef:UniRef100_A0A380E342,UniRef:UniRef50_Q5HNG0,UniRef:UniRef90_P63511;ec_number=2.6.1.21
contig_1	Pyrodigal	gene	1834684	1836093	.	-	.	ID=GCA000144955_01736_gene;locus_tag=GCA000144955_01736;gene=sapep
contig_1	Pyrodigal	CDS	1834684	1836093	.	-	0	ID=GCA000144955_01736;Name=Mn(2+)-dependent dipeptidase Sapep;locus_tag=GCA000144955_01736;product=Mn(2+)-dependent dipeptidase Sapep;Dbxref=GO:0006508,GO:0006526,GO:0008237,GO:0008270,GO:0008777,GO:0016805;gene=sapep;Parent=GCA000144955_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000265417,COG:COG0624,COG:E,RefSeq:WP_000265417.1,SO:0001217,UniParc:UPI000005437B,UniRef:UniRef100_Q2FXH9,UniRef:UniRef50_Q2FXH9,UniRef:UniRef90_Q2FXH9;ec_number=3.4.13.-
contig_1	Pyrodigal	gene	1836641	1837063	.	-	.	ID=GCA000144955_01737_gene;locus_tag=GCA000144955_01737;gene=ytxH
contig_1	Pyrodigal	CDS	1836641	1837063	.	-	0	ID=GCA000144955_01737;Name=YtxH domain-containing protein;locus_tag=GCA000144955_01737;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000144955_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001051864.1,SO:0001217,UniParc:UPI0001DDAAA6,UniRef:UniRef100_UPI0001DDAAA6,UniRef:UniRef50_A0A1J3ZYN5,UniRef:UniRef90_Q2FXH8
contig_1	Pyrodigal	gene	1837080	1837775	.	-	.	ID=GCA000144955_01738_gene;locus_tag=GCA000144955_01738;gene=rsuA
contig_1	Pyrodigal	CDS	1837080	1837775	.	-	0	ID=GCA000144955_01738;Name=Pseudouridine synthase;locus_tag=GCA000144955_01738;product=Pseudouridine synthase;gene=rsuA;Parent=GCA000144955_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_001217117.1,SO:0001217,UniParc:UPI000175C125,UniRef:UniRef100_A0A2S6D0E1,UniRef:UniRef50_A0A2S6D0E1,UniRef:UniRef90_A0A2S6D0E1
contig_1	Pyrodigal	gene	1837772	1839433	.	-	.	ID=GCA000144955_01739_gene;locus_tag=GCA000144955_01739;gene=spoVB
contig_1	Pyrodigal	CDS	1837772	1839433	.	-	0	ID=GCA000144955_01739;Name=Polysaccharide biosynthesis protein;locus_tag=GCA000144955_01739;product=Polysaccharide biosynthesis protein;gene=spoVB;Parent=GCA000144955_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5841,COG:D,RefSeq:WP_000004344.1,SO:0001217,UniParc:UPI00005FE5B3,UniRef:UniRef100_A0A2S6D0G5,UniRef:UniRef50_B9E7H2,UniRef:UniRef90_A0A2K4AFH1
contig_1	Pyrodigal	gene	1839839	1841107	.	+	.	ID=GCA000144955_01740_gene;locus_tag=GCA000144955_01740;gene=yhiN
contig_1	Pyrodigal	CDS	1839839	1841107	.	+	0	ID=GCA000144955_01740;Name=Aminoacetone oxidase family FAD-binding enzyme;locus_tag=GCA000144955_01740;product=Aminoacetone oxidase family FAD-binding enzyme;gene=yhiN;Parent=GCA000144955_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,RefSeq:WP_000284999.1,SO:0001217,UniParc:UPI0001DDAAA7,UniRef:UniRef100_UPI0001DDAAA7,UniRef:UniRef50_A0A0U1MPZ9,UniRef:UniRef90_A0A0U1MPZ9
contig_1	Pyrodigal	gene	1841224	1847784	.	-	.	ID=GCA000144955_01741_gene;locus_tag=GCA000144955_01741;gene=sasC
contig_1	Pyrodigal	CDS	1841224	1847784	.	-	0	ID=GCA000144955_01741;Name=LPXTG-anchored repetitive surface protein SasC;locus_tag=GCA000144955_01741;product=LPXTG-anchored repetitive surface protein SasC;gene=sasC;Parent=GCA000144955_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001050546,RefSeq:WP_001050557.1,SO:0001217,UniParc:UPI0001DDAAA8,UniRef:UniRef100_UPI0001DDAAA8,UniRef:UniRef50_C7BUR8,UniRef:UniRef90_UPI001C1F2984
contig_1	Pyrodigal	gene	1848110	1848421	.	-	.	ID=GCA000144955_01742_gene;locus_tag=GCA000144955_01742;gene=pspE
contig_1	Pyrodigal	CDS	1848110	1848421	.	-	0	ID=GCA000144955_01742;Name=Rhodanese domain-containing protein;locus_tag=GCA000144955_01742;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000144955_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_000836465.1,SO:0001217,UniParc:UPI0000054374,UniRef:UniRef100_Q2FXH3,UniRef:UniRef50_A0A654B5B2,UniRef:UniRef90_Q2FXH3
contig_1	Pyrodigal	gene	1848443	1850860	.	-	.	ID=GCA000144955_01743_gene;locus_tag=GCA000144955_01743;gene=leuS
contig_1	Pyrodigal	CDS	1848443	1850860	.	-	0	ID=GCA000144955_01743;Name=leucine--tRNA ligase;locus_tag=GCA000144955_01743;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000144955_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_103246006.1,SO:0001217,UniParc:UPI0002FB4CD9,UniRef:UniRef100_UPI0002FB4CD9,UniRef:UniRef50_A8FGG0,UniRef:UniRef90_Q2FXH2;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	1851149	1852330	.	-	.	ID=GCA000144955_01744_gene;locus_tag=GCA000144955_01744;gene=araJ
contig_1	Pyrodigal	CDS	1851149	1852330	.	-	0	ID=GCA000144955_01744;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_01744;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000144955_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001025061.1,SO:0001217,UniParc:UPI0000054372,UniRef:UniRef100_Q2FXH1,UniRef:UniRef50_Q2FXH1,UniRef:UniRef90_Q2FXH1
contig_1	Pyrodigal	gene	1852440	1853393	.	+	.	ID=GCA000144955_01745_gene;locus_tag=GCA000144955_01745;gene=yhcC
contig_1	Pyrodigal	CDS	1852440	1853393	.	+	0	ID=GCA000144955_01745;Name=TIGR01212 family radical SAM protein;locus_tag=GCA000144955_01745;product=TIGR01212 family radical SAM protein;Dbxref=GO:0051536,GO:1904047;gene=yhcC;Parent=GCA000144955_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1242,COG:R,KEGG:K07139,RefSeq:WP_000526545.1,SO:0001217,UniParc:UPI0001DDAAAA,UniRef:UniRef100_UPI0001DDAAAA,UniRef:UniRef50_U1LL80,UniRef:UniRef90_Q2FXH0
contig_1	Pyrodigal	gene	1853390	1853953	.	+	.	ID=GCA000144955_01746_gene;locus_tag=GCA000144955_01746;gene=mnmM
contig_1	Pyrodigal	CDS	1853390	1853953	.	+	0	ID=GCA000144955_01746;Name=tRNA (mnm(5)s(2)U34)-methyltransferase;locus_tag=GCA000144955_01746;product=tRNA (mnm(5)s(2)U34)-methyltransferase;Dbxref=GO:0008033,GO:0008168,GO:0032259;gene=mnmM;Parent=GCA000144955_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,RefSeq:WP_000764419.1,SO:0001217,UniParc:UPI0000054370,UniRef:UniRef100_Q2FXG9,UniRef:UniRef50_Q2FXG9,UniRef:UniRef90_Q2FXG9;ec_number=2.1.1.61
contig_1	Pyrodigal	gene	1854073	1854474	.	-	.	ID=GCA000144955_01747_gene;locus_tag=GCA000144955_01747;gene=rot
contig_1	Pyrodigal	CDS	1854073	1854474	.	-	0	ID=GCA000144955_01747;Name=HTH-type transcriptional regulator rot;locus_tag=GCA000144955_01747;product=HTH-type transcriptional regulator rot;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=rot;Parent=GCA000144955_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K20338,RefSeq:WP_000757543.1,SO:0001217,UniParc:UPI000069AAE8,UniRef:UniRef100_Q9RFJ6,UniRef:UniRef50_Q9RFJ6,UniRef:UniRef90_Q9RFJ6
contig_1	Pyrodigal	gene	1855046	1855873	.	-	.	ID=GCA000144955_01748_gene;locus_tag=GCA000144955_01748;gene=pldB
contig_1	Pyrodigal	CDS	1855046	1855873	.	-	0	ID=GCA000144955_01748;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000144955_01748;product=Serine aminopeptidase S33 domain-containing protein;gene=pldB;Parent=GCA000144955_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_000266093.1,SO:0001217,UniParc:UPI0001DDAAAB,UniRef:UniRef100_UPI0001DDAAAB,UniRef:UniRef50_Q2FXG5,UniRef:UniRef90_Q2FXG5
contig_1	Pyrodigal	gene	1856107	1857108	.	+	.	ID=GCA000144955_01749_gene;locus_tag=GCA000144955_01749;gene=putA
contig_1	Pyrodigal	CDS	1856107	1857108	.	+	0	ID=GCA000144955_01749;Name=proline dehydrogenase;locus_tag=GCA000144955_01749;product=proline dehydrogenase;gene=putA;Parent=GCA000144955_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0506,COG:E,RefSeq:WP_001196364.1,SO:0001217,UniParc:UPI0001DD9197,UniRef:UniRef100_UPI0001DD9197,UniRef:UniRef50_A0A390ZXL9,UniRef:UniRef90_A0A390ZXL9
contig_1	Pyrodigal	gene	1857230	1857694	.	-	.	ID=GCA000144955_01750_gene;locus_tag=GCA000144955_01750;gene=ribE
contig_1	Pyrodigal	CDS	1857230	1857694	.	-	0	ID=GCA000144955_01750;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000144955_01750;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005829,GO:0009231,GO:0009349;gene=ribE;Parent=GCA000144955_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_001008548.1,SO:0001217,UniParc:UPI0001DD9198,UniRef:UniRef100_UPI0001DD9198,UniRef:UniRef50_O66529,UniRef:UniRef90_Q2FXG2;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	1857707	1858888	.	-	.	ID=GCA000144955_01751_gene;locus_tag=GCA000144955_01751;gene=ribBA
contig_1	Pyrodigal	CDS	1857707	1858888	.	-	0	ID=GCA000144955_01751;Name=Riboflavin biosynthesis protein RibBA;locus_tag=GCA000144955_01751;product=Riboflavin biosynthesis protein RibBA;Dbxref=GO:0000287,GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0008686,GO:0009231,GO:0030145;gene=ribBA;Parent=GCA000144955_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,KEGG:K14652,RefSeq:WP_001159039.1,SO:0001217,UniParc:UPI0001DD9199,UniRef:UniRef100_UPI0001DD9199,UniRef:UniRef50_Q4L7B1,UniRef:UniRef90_Q99TA0;ec_number=4.1.99.12
contig_1	Pyrodigal	gene	1858899	1859531	.	-	.	ID=GCA000144955_01752_gene;locus_tag=GCA000144955_01752;gene=ribC
contig_1	Pyrodigal	CDS	1858899	1859531	.	-	0	ID=GCA000144955_01752;Name=riboflavin synthase;locus_tag=GCA000144955_01752;product=riboflavin synthase;gene=ribC;Parent=GCA000144955_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_000493885.1,SO:0001217,UniParc:UPI0001DD919A,UniRef:UniRef100_UPI0001DD919A,UniRef:UniRef50_B9DN31,UniRef:UniRef90_A0A0U1MNE7;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1859538	1860581	.	-	.	ID=GCA000144955_01753_gene;locus_tag=GCA000144955_01753;gene=ribD
contig_1	Pyrodigal	CDS	1859538	1860581	.	-	0	ID=GCA000144955_01753;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000144955_01753;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008703,GO:0008835;gene=ribD;Parent=GCA000144955_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,RefSeq:WP_000077355.1,SO:0001217,UniParc:UPI0002E35053,UniRef:UniRef100_UPI0002E35053,UniRef:UniRef50_A0A2G4VG13,UniRef:UniRef90_A0A2G4VG13;ec_number=3.5.4.26
contig_1	Infernal	regulatory_region	1860708	1860843	1.5e-20	-	.	ID=BPGLLONNDN_158;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1861062	1862564	.	-	.	ID=GCA000144955_01754_gene;locus_tag=GCA000144955_01754;gene=ydhS
contig_1	Pyrodigal	CDS	1861062	1862564	.	-	0	ID=GCA000144955_01754;Name=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000144955_01754;product=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;gene=ydhS;Parent=GCA000144955_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4529,COG:R,RefSeq:WP_001261685.1,SO:0001217,UniParc:UPI0001DD919C,UniRef:UniRef100_UPI0001DD919C,UniRef:UniRef50_S2XMM3,UniRef:UniRef90_Q2FXF8
contig_1	Pyrodigal	gene	1863086	1863400	.	+	.	ID=GCA000144955_01755_gene;locus_tag=GCA000144955_01755;gene=arsR
contig_1	Pyrodigal	CDS	1863086	1863400	.	+	0	ID=GCA000144955_01755;Name=ArsR;locus_tag=GCA000144955_01755;product=ArsR;gene=arsR;Parent=GCA000144955_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0640,COG:K,RefSeq:WP_000221320.1,SO:0001217,UniParc:UPI0001DD919D,UniRef:UniRef100_UPI0001DD919D,UniRef:UniRef50_P30338,UniRef:UniRef90_Q6Y0Q0
contig_1	Pyrodigal	gene	1863400	1864692	.	+	.	ID=GCA000144955_01756_gene;locus_tag=GCA000144955_01756;gene=arsB
contig_1	Pyrodigal	CDS	1863400	1864692	.	+	0	ID=GCA000144955_01756;Name=arsenite efflux transporter membrane subunit ArsB;locus_tag=GCA000144955_01756;product=arsenite efflux transporter membrane subunit ArsB;Dbxref=GO:0005886,GO:0015105,GO:0015700,GO:0016020,GO:0046685;gene=arsB;Parent=GCA000144955_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1055,COG:P,KEGG:K03893,NCBIFam:NF033877.0,RefSeq:WP_000989118.1,SO:0001217,UniParc:UPI0001DD919E,UniRef:UniRef100_UPI0001DD919E,UniRef:UniRef50_Q5HF02,UniRef:UniRef90_Q5HF02
contig_1	Pyrodigal	gene	1864723	1866369	.	-	.	ID=GCA000144955_01757_gene;locus_tag=GCA000144955_01757;gene=tnp
contig_1	Pyrodigal	CDS	1864723	1866369	.	-	0	ID=GCA000144955_01757;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_01757;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_258091374.1,SO:0001217,UniParc:UPI002156FE5F,UniRef:UniRef100_UPI002156FE5F,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	1866359	1866584	.	+	.	ID=GCA000144955_01758_gene;locus_tag=GCA000144955_01758;gene=tsr24
contig_1	Infernal	ncRNA	1866359	1866584	1.1e-28	+	.	ID=GCA000144955_01758;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_01758;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_01758_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1866693	1867547	.	-	.	ID=GCA000144955_01759_gene;locus_tag=GCA000144955_01759;gene=lytD
contig_1	Pyrodigal	CDS	1866693	1867547	.	-	0	ID=GCA000144955_01759;Name=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;locus_tag=GCA000144955_01759;product=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;gene=lytD;Parent=GCA000144955_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_001032833.1,SO:0001217,UniParc:UPI00000BF2A9,UniRef:UniRef100_Q2FXF4,UniRef:UniRef50_Q2FXF4,UniRef:UniRef90_Q2FXF4
contig_1	Pyrodigal	gene	1867823	1868047	.	-	.	ID=GCA000144955_01760_gene;locus_tag=GCA000144955_01760
contig_1	Pyrodigal	CDS	1867823	1868047	.	-	0	ID=GCA000144955_01760;Name=Staphylococcal protein;locus_tag=GCA000144955_01760;product=Staphylococcal protein;Parent=GCA000144955_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384171.1,SO:0001217,UniParc:UPI000005435F,UniRef:UniRef100_Q2FXF3,UniRef:UniRef50_Q2FXF3,UniRef:UniRef90_Q2FXF3
contig_1	Pyrodigal	gene	1868246	1868716	.	+	.	ID=GCA000144955_01761_gene;locus_tag=GCA000144955_01761;gene=sigS
contig_1	Pyrodigal	CDS	1868246	1868716	.	+	0	ID=GCA000144955_01761;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000144955_01761;product=RNA polymerase sigma factor SigS;Dbxref=GO:0003677,GO:0006352,GO:0016987;gene=sigS;Parent=GCA000144955_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671063,COG:COG1595,COG:K,RefSeq:WP_000671051.1,SO:0001217,UniParc:UPI0001DD91A0,UniRef:UniRef100_UPI0001DD91A0,UniRef:UniRef50_Q2FXF2,UniRef:UniRef90_Q2FXF2
contig_1	Pyrodigal	gene	1868829	1869272	.	+	.	ID=GCA000144955_01762_gene;locus_tag=GCA000144955_01762;gene=comK
contig_1	Pyrodigal	CDS	1868829	1869272	.	+	0	ID=GCA000144955_01762;Name=Competence protein ComK;locus_tag=GCA000144955_01762;product=Competence protein ComK;gene=comK;Parent=GCA000144955_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001153738.1,SO:0001217,UniParc:UPI0001DD91A1,UniRef:UniRef100_UPI0001DD91A1,UniRef:UniRef50_Q2FXF1,UniRef:UniRef90_Q2FXF1
contig_1	Pyrodigal	gene	1869259	1869702	.	-	.	ID=GCA000144955_01763_gene;locus_tag=GCA000144955_01763
contig_1	Pyrodigal	CDS	1869259	1869702	.	-	0	ID=GCA000144955_01763;Name=Staphylococcal protein;locus_tag=GCA000144955_01763;product=Staphylococcal protein;Parent=GCA000144955_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030462.1,SO:0001217,UniParc:UPI0001DD91A2,UniRef:UniRef100_UPI0001DD91A2,UniRef:UniRef50_Q2FXF0,UniRef:UniRef90_Q2FXF0
contig_1	Pyrodigal	gene	1870000	1870635	.	+	.	ID=GCA000144955_01764_gene;locus_tag=GCA000144955_01764;gene=sdpA
contig_1	Pyrodigal	CDS	1870000	1870635	.	+	0	ID=GCA000144955_01764;Name=CPBP family intramembrane metalloprotease SdpA;locus_tag=GCA000144955_01764;product=CPBP family intramembrane metalloprotease SdpA;gene=sdpA;Parent=GCA000144955_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001168904,COG:COG1266,COG:O,RefSeq:WP_014532770.1,SO:0001217,UniParc:UPI0001DD91A3,UniRef:UniRef100_UPI0001DD91A3,UniRef:UniRef50_Q2FXE9,UniRef:UniRef90_Q2FXE9
contig_1	Pyrodigal	gene	1871076	1871789	.	-	.	ID=GCA000144955_01765_gene;locus_tag=GCA000144955_01765;gene=talA
contig_1	Pyrodigal	CDS	1871076	1871789	.	-	0	ID=GCA000144955_01765;Name=transaldolase;locus_tag=GCA000144955_01765;product=transaldolase;Dbxref=GO:0004801,GO:0006098;gene=talA;Parent=GCA000144955_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,RefSeq:WP_001096494.1,SO:0001217,UniParc:UPI000005435A,UniRef:UniRef100_Q2FXE8,UniRef:UniRef50_A0A0D0SMT5,UniRef:UniRef90_A0A0D0SMT5;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	1872046	1872348	.	+	.	ID=GCA000144955_01766_gene;locus_tag=GCA000144955_01766
contig_1	Pyrodigal	CDS	1872046	1872348	.	+	0	ID=GCA000144955_01766;Name=Membrane protein;locus_tag=GCA000144955_01766;product=Membrane protein;Parent=GCA000144955_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091445.1,SO:0001217,UniParc:UPI0000054357,UniRef:UniRef100_A0AA43V2N0,UniRef:UniRef50_Q5HND2,UniRef:UniRef90_A0A389U3H2
contig_1	Pyrodigal	gene	1872604	1872969	.	+	.	ID=GCA000144955_01767_gene;locus_tag=GCA000144955_01767;gene=crcB
contig_1	Pyrodigal	CDS	1872604	1872969	.	+	0	ID=GCA000144955_01767;Name=fluoride efflux transporter CrcB;locus_tag=GCA000144955_01767;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=crcB;Parent=GCA000144955_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_001200550.1,SO:0001217,UniParc:UPI0001DD91A4,UniRef:UniRef100_A0A6A9GTR4,UniRef:UniRef50_Q2FXE6,UniRef:UniRef90_Q2FXE6
contig_1	Pyrodigal	gene	1872966	1873319	.	+	.	ID=GCA000144955_01768_gene;locus_tag=GCA000144955_01768;gene=fluC
contig_1	Pyrodigal	CDS	1872966	1873319	.	+	0	ID=GCA000144955_01768;Name=Fluoride-specific ion channel FluC;locus_tag=GCA000144955_01768;product=Fluoride-specific ion channel FluC;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=fluC;Parent=GCA000144955_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_000623475.1,SO:0001217,UniParc:UPI0001DD91A5,UniRef:UniRef100_UPI0001DD91A5,UniRef:UniRef50_Q2FXE5,UniRef:UniRef90_Q2FXE5
contig_1	Pyrodigal	gene	1873568	1874401	.	-	.	ID=GCA000144955_01769_gene;locus_tag=GCA000144955_01769;gene=aRA1
contig_1	Pyrodigal	CDS	1873568	1874401	.	-	0	ID=GCA000144955_01769;Name=Aldo/keto reductase family protein;locus_tag=GCA000144955_01769;product=Aldo/keto reductase family protein;gene=aRA1;Parent=GCA000144955_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000453308.1,SO:0001217,UniParc:UPI0001DD91A6,UniRef:UniRef100_UPI0001DD91A6,UniRef:UniRef50_B9DN15,UniRef:UniRef90_A0A0H2J452
contig_1	Pyrodigal	gene	1874613	1875521	.	-	.	ID=GCA000144955_01770_gene;locus_tag=GCA000144955_01770
contig_1	Pyrodigal	CDS	1874613	1875521	.	-	0	ID=GCA000144955_01770;Name=NERD domain-containing protein;locus_tag=GCA000144955_01770;product=NERD domain-containing protein;Parent=GCA000144955_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366165.1,SO:0001217,UniParc:UPI00019CD6B8,UniRef:UniRef100_A0A7U7ID56,UniRef:UniRef50_Q2G1W5,UniRef:UniRef90_Q2G1W5
contig_1	Pyrodigal	gene	1875646	1876839	.	-	.	ID=GCA000144955_01771_gene;locus_tag=GCA000144955_01771;gene=metK
contig_1	Pyrodigal	CDS	1875646	1876839	.	-	0	ID=GCA000144955_01771;Name=methionine adenosyltransferase;locus_tag=GCA000144955_01771;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000144955_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_000933822.1,SO:0001217,UniParc:UPI0000054350,UniRef:UniRef100_Q2G1W4,UniRef:UniRef50_P72871,UniRef:UniRef90_Q2G1W4;ec_number=2.5.1.6
contig_1	Infernal	regulatory_region	1876945	1877055	1.8e-13	-	.	ID=BPGLLONNDN_171;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1877210	1878802	.	+	.	ID=GCA000144955_01772_gene;locus_tag=GCA000144955_01772;gene=pckA
contig_1	Pyrodigal	CDS	1877210	1878802	.	+	0	ID=GCA000144955_01772;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA000144955_01772;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA000144955_01772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,KEGG:K01610,RefSeq:WP_000109904.1,SO:0001217,UniParc:UPI0001DD91A7,UniRef:UniRef100_UPI0001DD91A7,UniRef:UniRef50_Q2G1W2,UniRef:UniRef90_Q2G1W2;ec_number=4.1.1.49
contig_1	Pyrodigal	gene	1879052	1879822	.	-	.	ID=GCA000144955_01773_gene;locus_tag=GCA000144955_01773;gene=dAP2
contig_1	Pyrodigal	CDS	1879052	1879822	.	-	0	ID=GCA000144955_01773;Name=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;locus_tag=GCA000144955_01773;product=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;gene=dAP2;Parent=GCA000144955_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1506,COG:E,SO:0001217,UniRef:UniRef50_Q2G2V6,UniRef:UniRef90_Q2G2V6
contig_1	Pyrodigal	gene	1879803	1880282	.	-	.	ID=GCA000144955_01774_gene;locus_tag=GCA000144955_01774;gene=ytkD
contig_1	Pyrodigal	CDS	1879803	1880282	.	-	0	ID=GCA000144955_01774;Name=RNA deprotection pyrophosphohydrolase;locus_tag=GCA000144955_01774;product=RNA deprotection pyrophosphohydrolase;Dbxref=GO:0006139,GO:0017111;gene=ytkD;Parent=GCA000144955_01774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,SO:0001217,UniRef:UniRef50_A0A0D6XNS6,UniRef:UniRef90_Q2G2V5
contig_1	Pyrodigal	gene	1880342	1880599	.	+	.	ID=GCA000144955_01775_gene;locus_tag=GCA000144955_01775;gene=yidD
contig_1	Pyrodigal	CDS	1880342	1880599	.	+	0	ID=GCA000144955_01775;Name=membrane protein insertion efficiency factor YidD;locus_tag=GCA000144955_01775;product=membrane protein insertion efficiency factor YidD;Dbxref=GO:0005886;gene=yidD;Parent=GCA000144955_01775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0759,COG:M,KEGG:K08998,RefSeq:WP_000718107.1,SO:0001217,UniParc:UPI000013B193,UniRef:UniRef100_Q2G2V4,UniRef:UniRef50_Q2G2V4,UniRef:UniRef90_Q2G2V4
contig_1	Pyrodigal	gene	1880596	1881597	.	-	.	ID=GCA000144955_01776_gene;locus_tag=GCA000144955_01776;gene=menC
contig_1	Pyrodigal	CDS	1880596	1881597	.	-	0	ID=GCA000144955_01776;Name=o-succinylbenzoate synthase;locus_tag=GCA000144955_01776;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016829,GO:0043748;gene=menC;Parent=GCA000144955_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,RefSeq:WP_000778542.1,SO:0001217,UniParc:UPI0001DD91AA,UniRef:UniRef100_UPI0001DD91AA,UniRef:UniRef50_A0A0H2WWB5,UniRef:UniRef90_A0A0H2WWB5;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	1881602	1883080	.	-	.	ID=GCA000144955_01777_gene;locus_tag=GCA000144955_01777;gene=menE
contig_1	Pyrodigal	CDS	1881602	1883080	.	-	0	ID=GCA000144955_01777;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000144955_01777;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA000144955_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000348352.1,SO:0001217,UniParc:UPI0001DD91AB,UniRef:UniRef100_UPI0001DD91AB,UniRef:UniRef50_Q2G2V3,UniRef:UniRef90_Q2G2V3;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	1883240	1883722	.	-	.	ID=GCA000144955_01778_gene;locus_tag=GCA000144955_01778
contig_1	Pyrodigal	CDS	1883240	1883722	.	-	0	ID=GCA000144955_01778;Name=DUF4909 domain-containing protein;locus_tag=GCA000144955_01778;product=DUF4909 domain-containing protein;Parent=GCA000144955_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G2Y6,UniRef:UniRef90_Q2G2Y6
contig_1	Pyrodigal	gene	1884034	1884648	.	+	.	ID=GCA000144955_01779_gene;locus_tag=GCA000144955_01779
contig_1	Pyrodigal	CDS	1884034	1884648	.	+	0	ID=GCA000144955_01779;Name=Endonuclease;locus_tag=GCA000144955_01779;product=Endonuclease;Parent=GCA000144955_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380E5B9
contig_1	Pyrodigal	gene	1884729	1885724	.	+	.	ID=GCA000144955_01780_gene;locus_tag=GCA000144955_01780
contig_1	Pyrodigal	CDS	1884729	1885724	.	+	0	ID=GCA000144955_01780;Name=DUF4352 domain-containing protein;locus_tag=GCA000144955_01780;product=DUF4352 domain-containing protein;Parent=GCA000144955_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070637.1,SO:0001217,UniParc:UPI0001DD91AE,UniRef:UniRef100_UPI0001DD91AE,UniRef:UniRef50_Q2G2Y3,UniRef:UniRef90_Q2G2Y3
contig_1	Pyrodigal	gene	1885800	1886426	.	+	.	ID=GCA000144955_01781_gene;locus_tag=GCA000144955_01781
contig_1	Pyrodigal	CDS	1885800	1886426	.	+	0	ID=GCA000144955_01781;Name=Lipoprotein;locus_tag=GCA000144955_01781;product=Lipoprotein;Parent=GCA000144955_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669040.1,SO:0001217,UniParc:UPI0001DD91AF,UniRef:UniRef100_UPI0001DD91AF,UniRef:UniRef50_Q2G2Y5,UniRef:UniRef90_Q2G2Y5
contig_1	Pyrodigal	gene	1886467	1886808	.	+	.	ID=GCA000144955_01782_gene;locus_tag=GCA000144955_01782
contig_1	Pyrodigal	CDS	1886467	1886808	.	+	0	ID=GCA000144955_01782;Name=DUF3969 domain-containing protein;locus_tag=GCA000144955_01782;product=DUF3969 domain-containing protein;Parent=GCA000144955_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000627543.1,SO:0001217,UniParc:UPI0001DD91B0,UniRef:UniRef100_UPI0001DD91B0,UniRef:UniRef50_Q2G2Y2,UniRef:UniRef90_Q2G2Y2
contig_1	Pyrodigal	gene	1886909	1887481	.	+	.	ID=GCA000144955_01783_gene;locus_tag=GCA000144955_01783
contig_1	Pyrodigal	CDS	1886909	1887481	.	+	0	ID=GCA000144955_01783;Name=Phage protein;locus_tag=GCA000144955_01783;product=Phage protein;Parent=GCA000144955_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414213.1,SO:0001217,UniParc:UPI0001DD91B1,UniRef:UniRef100_UPI0001DD91B1,UniRef:UniRef50_Q2FXE1,UniRef:UniRef90_Q2FXE1
contig_1	Pyrodigal	gene	1887679	1888236	.	-	.	ID=GCA000144955_01784_gene;locus_tag=GCA000144955_01784;gene=irrE
contig_1	Pyrodigal	CDS	1887679	1888236	.	-	0	ID=GCA000144955_01784;Name=IrrE N-terminal-like domain-containing protein;locus_tag=GCA000144955_01784;product=IrrE N-terminal-like domain-containing protein;gene=irrE;Parent=GCA000144955_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FXE0,UniRef:UniRef90_A0A7U7JVE6
contig_1	Pyrodigal	gene	1888609	1888785	.	-	.	ID=GCA000144955_01785_gene;locus_tag=GCA000144955_01785
contig_1	Pyrodigal	CDS	1888609	1888785	.	-	0	ID=GCA000144955_01785;Name=Mobilization protein;locus_tag=GCA000144955_01785;product=Mobilization protein;Parent=GCA000144955_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000375476.1,SO:0001217,UniParc:UPI000005433E,UniRef:UniRef100_Q2FXD8,UniRef:UniRef50_A0AAC9RPI6,UniRef:UniRef90_Q2FXD8
contig_1	Pyrodigal	gene	1888796	1889179	.	-	.	ID=GCA000144955_01786_gene;locus_tag=GCA000144955_01786
contig_1	Pyrodigal	CDS	1888796	1889179	.	-	0	ID=GCA000144955_01786;Name=Phage protein;locus_tag=GCA000144955_01786;product=Phage protein;Parent=GCA000144955_01786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000610001.1,SO:0001217,UniParc:UPI0001DD91B4,UniRef:UniRef100_UPI0001DD91B4,UniRef:UniRef50_A0A077UIW9,UniRef:UniRef90_A0A077UIW9
contig_1	Pyrodigal	gene	1889627	1889863	.	-	.	ID=GCA000144955_01787_gene;locus_tag=GCA000144955_01787
contig_1	Pyrodigal	CDS	1889627	1889863	.	-	0	ID=GCA000144955_01787;Name=Transposase;locus_tag=GCA000144955_01787;product=Transposase;Parent=GCA000144955_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000251966.1,SO:0001217,UniParc:UPI0002DD83BC,UniRef:UniRef100_UPI0002DD83BC,UniRef:UniRef50_A0A1Q5NZ33,UniRef:UniRef90_A0AAE8PE17
contig_1	Infernal	gene	1890051	1890145	.	-	.	ID=GCA000144955_01788_gene;locus_tag=GCA000144955_01788;gene=fstAT
contig_1	Infernal	ncRNA	1890051	1890145	1.6e-14	-	.	ID=GCA000144955_01788;Name=Fst antitoxin sRNA;locus_tag=GCA000144955_01788;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000144955_01788_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	1890320	1890475	.	+	.	ID=GCA000144955_01789_gene;locus_tag=GCA000144955_01789
contig_1	Pyrodigal	CDS	1890320	1890475	.	+	0	ID=GCA000144955_01789;Name=Phage protein;locus_tag=GCA000144955_01789;product=Phage protein;Parent=GCA000144955_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001215821.1,SO:0001217,UniParc:UPI0001DD91B5,UniRef:UniRef100_UPI0001DD91B5,UniRef:UniRef50_A0A380DUU7,UniRef:UniRef90_A0A077UMA2
contig_1	Pyrodigal	gene	1891031	1891474	.	-	.	ID=GCA000144955_01790_gene;locus_tag=GCA000144955_01790
contig_1	Pyrodigal	CDS	1891031	1891474	.	-	0	ID=GCA000144955_01790;Name=Exported protein;locus_tag=GCA000144955_01790;product=Exported protein;Parent=GCA000144955_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000731415.1,SO:0001217,UniParc:UPI0001DD91B6,UniRef:UniRef100_UPI0001DD91B6,UniRef:UniRef50_A0A1J3ZY30,UniRef:UniRef90_A0A7U7EVP4
contig_1	Pyrodigal	gene	1891474	1891758	.	-	.	ID=GCA000144955_01791_gene;locus_tag=GCA000144955_01791
contig_1	Pyrodigal	CDS	1891474	1891758	.	-	0	ID=GCA000144955_01791;Name=DUF1433 domain-containing protein;locus_tag=GCA000144955_01791;product=DUF1433 domain-containing protein;Parent=GCA000144955_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI000C056CAA,UniRef:UniRef90_UPI00315D4BA7
contig_1	Pyrodigal	gene	1891797	1891916	.	-	.	ID=GCA000144955_01792_gene;locus_tag=GCA000144955_01792
contig_1	Pyrodigal	CDS	1891797	1891916	.	-	0	ID=GCA000144955_01792;Name=hypothetical protein;locus_tag=GCA000144955_01792;product=hypothetical protein;Parent=GCA000144955_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1X650
contig_1	Pyrodigal	gene	1891916	1892359	.	-	.	ID=GCA000144955_01793_gene;locus_tag=GCA000144955_01793
contig_1	Pyrodigal	CDS	1891916	1892359	.	-	0	ID=GCA000144955_01793;Name=DUF1433 domain-containing protein;locus_tag=GCA000144955_01793;product=DUF1433 domain-containing protein;Parent=GCA000144955_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000747793.1,SO:0001217,UniParc:UPI0001DD91B9,UniRef:UniRef100_UPI0001DD91B9,UniRef:UniRef50_A0A1J3ZY30,UniRef:UniRef90_A0A380E5J6
contig_1	Pyrodigal	gene	1892889	1895312	.	+	.	ID=GCA000144955_01794_gene;locus_tag=GCA000144955_01794
contig_1	Pyrodigal	CDS	1892889	1895312	.	+	0	ID=GCA000144955_01794;Name=Hyaluronate lyase;locus_tag=GCA000144955_01794;product=Hyaluronate lyase;Parent=GCA000144955_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01727,RefSeq:WP_000221415.1,SO:0001217,UniParc:UPI0001DD91BA,UniRef:UniRef100_UPI0001DD91BA,UniRef:UniRef50_Q59801,UniRef:UniRef90_A0A2S6DIG0;ec_number=4.2.2.1
contig_1	Pyrodigal	gene	1895436	1895744	.	-	.	ID=GCA000144955_01795_gene;locus_tag=GCA000144955_01795
contig_1	Pyrodigal	CDS	1895436	1895744	.	-	0	ID=GCA000144955_01795;Name=DUF1433 domain-containing protein;locus_tag=GCA000144955_01795;product=DUF1433 domain-containing protein;Parent=GCA000144955_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_150862263.1,SO:0001217,UniParc:UPI0001DD91BB,UniRef:UniRef100_UPI001785F2C2,UniRef:UniRef50_A0A853V5U6,UniRef:UniRef90_A0A2S1FUK1
contig_1	Pyrodigal	gene	1896026	1896469	.	-	.	ID=GCA000144955_01796_gene;locus_tag=GCA000144955_01796
contig_1	Pyrodigal	CDS	1896026	1896469	.	-	0	ID=GCA000144955_01796;Name=Exported protein;locus_tag=GCA000144955_01796;product=Exported protein;Parent=GCA000144955_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000439998.1,SO:0001217,UniParc:UPI0001DD91BC,UniRef:UniRef100_UPI0001DD91BC,UniRef:UniRef50_A0AAN2D538,UniRef:UniRef90_A0A6N3YS52
contig_1	Pyrodigal	gene	1896512	1898119	.	+	.	ID=GCA000144955_01797_gene;locus_tag=GCA000144955_01797
contig_1	Pyrodigal	CDS	1896512	1898119	.	+	0	ID=GCA000144955_01797;Name=Pathogenicity island protein;locus_tag=GCA000144955_01797;product=Pathogenicity island protein;Parent=GCA000144955_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000877849.1,SO:0001217,UniParc:UPI0001DD9346,UniRef:UniRef100_UPI0012491BA3,UniRef:UniRef50_A0A2S1FUK0,UniRef:UniRef90_A0A077UMA5
contig_1	Pyrodigal	gene	1898134	1898433	.	+	.	ID=GCA000144955_01798_gene;locus_tag=GCA000144955_01798
contig_1	Pyrodigal	CDS	1898134	1898433	.	+	0	ID=GCA000144955_01798;Name=ESAT-6 family protein;locus_tag=GCA000144955_01798;product=ESAT-6 family protein;Parent=GCA000144955_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000095386.1,SO:0001217,UniParc:UPI0001DD9347,UniRef:UniRef100_UPI0001DD9347,UniRef:UniRef50_A0A0U1MW30,UniRef:UniRef90_A0AAE8PDM6
contig_1	Pyrodigal	gene	1898686	1900512	.	-	.	ID=GCA000144955_01799_gene;locus_tag=GCA000144955_01799
contig_1	Pyrodigal	CDS	1898686	1900512	.	-	0	ID=GCA000144955_01799;Name=KAP family P-loop domain;locus_tag=GCA000144955_01799;product=KAP family P-loop domain;Parent=GCA000144955_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000413392.1,SO:0001217,UniParc:UPI0001DD9348,UniRef:UniRef100_UPI0001DD9348,UniRef:UniRef50_A0A7Z7QZM1,UniRef:UniRef90_A0A7Z7QZM1
contig_1	Pyrodigal	gene	1900549	1901787	.	-	.	ID=GCA000144955_01800_gene;locus_tag=GCA000144955_01800
contig_1	Pyrodigal	CDS	1900549	1901787	.	-	0	ID=GCA000144955_01800;Name=restriction endonuclease subunit S;locus_tag=GCA000144955_01800;product=restriction endonuclease subunit S;Parent=GCA000144955_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000072554.1,SO:0001217,UniParc:UPI0001DD9349,UniRef:UniRef100_UPI0001DD9349,UniRef:UniRef50_A0A2S1FUJ4,UniRef:UniRef90_UPI0001DD9349;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	1901780	1903336	.	-	.	ID=GCA000144955_01801_gene;locus_tag=GCA000144955_01801
contig_1	Pyrodigal	CDS	1901780	1903336	.	-	0	ID=GCA000144955_01801;Name=type I restriction-modification system subunit M;locus_tag=GCA000144955_01801;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;Parent=GCA000144955_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_000028608.1,SO:0001217,UniParc:UPI0001DD934A,UniRef:UniRef100_UPI0001DD934A,UniRef:UniRef50_B1BVR9,UniRef:UniRef90_A0A077UIY0;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	1903691	1904407	.	-	.	ID=GCA000144955_01802_gene;locus_tag=GCA000144955_01802;gene=splE
contig_1	Pyrodigal	CDS	1903691	1904407	.	-	0	ID=GCA000144955_01802;Name=serine protease SplE;locus_tag=GCA000144955_01802;product=serine protease SplE;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splE;Parent=GCA000144955_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038759,NCBIProtein:ABD30999.1,RefSeq:WP_001038720.1,SO:0001217,UniParc:UPI0001DD934B,UniRef:UniRef100_UPI0001DD934B,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC7;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1904572	1905288	.	-	.	ID=GCA000144955_01803_gene;locus_tag=GCA000144955_01803
contig_1	Pyrodigal	CDS	1904572	1905288	.	-	0	ID=GCA000144955_01803;Name=Serine protease;locus_tag=GCA000144955_01803;product=Serine protease;Parent=GCA000144955_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001038767.1,SO:0001217,UniParc:UPI0001DD934C,UniRef:UniRef100_UPI0001DD934C,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_A0AAN1ZME0
contig_1	Pyrodigal	gene	1905411	1906130	.	-	.	ID=GCA000144955_01804_gene;locus_tag=GCA000144955_01804
contig_1	Pyrodigal	CDS	1905411	1906130	.	-	0	ID=GCA000144955_01804;Name=serine protease;locus_tag=GCA000144955_01804;product=serine protease;Parent=GCA000144955_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001039018.1,SO:0001217,UniParc:UPI0001DD934D,UniRef:UniRef100_UPI0001DD934D,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_UPI000DAA5C94
contig_1	Pyrodigal	gene	1906188	1906910	.	-	.	ID=GCA000144955_01805_gene;locus_tag=GCA000144955_01805
contig_1	Pyrodigal	CDS	1906188	1906910	.	-	0	ID=GCA000144955_01805;Name=serine protease;locus_tag=GCA000144955_01805;product=serine protease;Parent=GCA000144955_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001039439.1,SO:0001217,UniParc:UPI0001DD934E,UniRef:UniRef100_UPI0001DD934E,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_UPI0020BF88E9
contig_1	Pyrodigal	gene	1907035	1907364	.	-	.	ID=GCA000144955_01806_gene;locus_tag=GCA000144955_01806
contig_1	Pyrodigal	CDS	1907035	1907364	.	-	0	ID=GCA000144955_01806;Name=Serine protease;locus_tag=GCA000144955_01806;product=Serine protease;Parent=GCA000144955_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_S2XXR9
contig_1	Pyrodigal	gene	1908692	1909255	.	+	.	ID=GCA000144955_01807_gene;locus_tag=GCA000144955_01807
contig_1	Pyrodigal	CDS	1908692	1909255	.	+	0	ID=GCA000144955_01807;Name=DUF4888 domain-containing protein;locus_tag=GCA000144955_01807;product=DUF4888 domain-containing protein;Parent=GCA000144955_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093224.1,SO:0001217,UniParc:UPI0001DD9350,UniRef:UniRef100_UPI0001DD9350,UniRef:UniRef50_Q2FXC0,UniRef:UniRef90_UPI00215BBCB8
contig_1	Pyrodigal	gene	1909648	1909920	.	-	.	ID=GCA000144955_01808_gene;locus_tag=GCA000144955_01808
contig_1	Pyrodigal	CDS	1909648	1909920	.	-	0	ID=GCA000144955_01808;Name=hypothetical protein;locus_tag=GCA000144955_01808;product=hypothetical protein;Parent=GCA000144955_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3JVY3
contig_1	Pyrodigal	gene	1910122	1910595	.	+	.	ID=GCA000144955_01809_gene;locus_tag=GCA000144955_01809
contig_1	Pyrodigal	CDS	1910122	1910595	.	+	0	ID=GCA000144955_01809;Name=Phage protein;locus_tag=GCA000144955_01809;product=Phage protein;Parent=GCA000144955_01809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000550248.1,SO:0001217,UniParc:UPI0001DD9352,UniRef:UniRef100_UPI0001DD9352,UniRef:UniRef50_A0A0U1MQN1,UniRef:UniRef90_A0A0U1MQN1
contig_1	Pyrodigal	gene	1910600	1911391	.	+	.	ID=GCA000144955_01810_gene;locus_tag=GCA000144955_01810
contig_1	Pyrodigal	CDS	1910600	1911391	.	+	0	ID=GCA000144955_01810;Name=DUF1828 domain-containing protein;locus_tag=GCA000144955_01810;product=DUF1828 domain-containing protein;Parent=GCA000144955_01810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000543858.1,SO:0001217,UniParc:UPI0001DD9353,UniRef:UniRef100_UPI0001DD9353,UniRef:UniRef50_A0A1M7FXN5,UniRef:UniRef90_A0A0U1MNS9
contig_1	Pyrodigal	gene	1911761	1912744	.	-	.	ID=GCA000144955_01811_gene;locus_tag=GCA000144955_01811;gene=lukD
contig_1	Pyrodigal	CDS	1911761	1912744	.	-	0	ID=GCA000144955_01811;Name=Leucotoxin LukD;locus_tag=GCA000144955_01811;product=Leucotoxin LukD;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=lukD;Parent=GCA000144955_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000782474.1,SO:0001217,UniParc:UPI0001DD9355,UniRef:UniRef100_UPI0001DD9355,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_O54082
contig_1	Pyrodigal	gene	1912746	1913681	.	-	.	ID=GCA000144955_01812_gene;locus_tag=GCA000144955_01812;gene=lukE
contig_1	Pyrodigal	CDS	1912746	1913681	.	-	0	ID=GCA000144955_01812;Name=bi-component leukocidin LukED subunit E;locus_tag=GCA000144955_01812;product=bi-component leukocidin LukED subunit E;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=lukE;Parent=GCA000144955_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_088621909,BlastRules:WP_114304764,NCBIProtein:RCV70079.1,RefSeq:WP_000473587.1,SO:0001217,UniParc:UPI0001DD9356,UniRef:UniRef100_UPI0001DD9356,UniRef:UniRef50_O54081,UniRef:UniRef90_O54081
contig_1	Infernal	gene	1914211	1914360	.	-	.	ID=GCA000144955_01813_gene;locus_tag=GCA000144955_01813;gene=sprC
contig_1	Infernal	ncRNA	1914211	1914360	3.3e-26	-	.	ID=GCA000144955_01813;Name=Small pathogenicity island RNA C (srn_3610);locus_tag=GCA000144955_01813;gene=sprC;product=Small pathogenicity island RNA C (srn_3610);Dbxref=RFAM:RF02890;Parent=GCA000144955_01813_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02890
contig_1	Pyrodigal	gene	1915309	1915905	.	+	.	ID=GCA000144955_01814_gene;locus_tag=GCA000144955_01814
contig_1	Pyrodigal	CDS	1915309	1915905	.	+	0	ID=GCA000144955_01814;Name=hypothetical protein;locus_tag=GCA000144955_01814;product=hypothetical protein;Parent=GCA000144955_01814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595638.1,SO:0001217,UniParc:UPI0001DD9358,UniRef:UniRef100_UPI0001DD9358,UniRef:UniRef50_A0A8G2M7F6,UniRef:UniRef90_A0A8G2M7F6
contig_1	Pyrodigal	gene	1916073	1917419	.	+	.	ID=GCA000144955_01815_gene;locus_tag=GCA000144955_01815
contig_1	Pyrodigal	CDS	1916073	1917419	.	+	0	ID=GCA000144955_01815;Name=DUF4041 domain-containing protein;locus_tag=GCA000144955_01815;product=DUF4041 domain-containing protein;Parent=GCA000144955_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000711490.1,SO:0001217,UniParc:UPI0001DD9359,UniRef:UniRef100_UPI0001DD9359,UniRef:UniRef50_A0A2W3AI05,UniRef:UniRef90_UPI0001DD9359
contig_1	Pyrodigal	gene	1917941	1918240	.	+	.	ID=GCA000144955_01816_gene;locus_tag=GCA000144955_01816
contig_1	Pyrodigal	CDS	1917941	1918240	.	+	0	ID=GCA000144955_01816;Name=DUF4160 domain-containing protein;locus_tag=GCA000144955_01816;product=DUF4160 domain-containing protein;Parent=GCA000144955_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7Z7W267
contig_1	Pyrodigal	gene	1918261	1919037	.	+	.	ID=GCA000144955_01817_gene;locus_tag=GCA000144955_01817
contig_1	Pyrodigal	CDS	1918261	1919037	.	+	0	ID=GCA000144955_01817;Name=DUF1828 domain-containing protein;locus_tag=GCA000144955_01817;product=DUF1828 domain-containing protein;Parent=GCA000144955_01817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848319.1,SO:0001217,UniParc:UPI0001DD935A,UniRef:UniRef100_UPI0001DD935A,UniRef:UniRef50_A0A6N2YQA1,UniRef:UniRef90_A0AA40JP27
contig_1	Pyrodigal	gene	1919435	1919542	.	+	.	ID=GCA000144955_01818_gene;locus_tag=GCA000144955_01818
contig_1	Pyrodigal	CDS	1919435	1919542	.	+	0	ID=GCA000144955_01818;Name=hypothetical protein;locus_tag=GCA000144955_01818;product=hypothetical protein;Parent=GCA000144955_01818_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1920145	1920522	.	+	.	ID=GCA000144955_01819_gene;locus_tag=GCA000144955_01819
contig_1	Pyrodigal	CDS	1920145	1920522	.	+	0	ID=GCA000144955_01819;Name=hypothetical protein;locus_tag=GCA000144955_01819;product=hypothetical protein;Parent=GCA000144955_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF13102.12
contig_1	Pyrodigal	gene	1920634	1920984	.	+	.	ID=GCA000144955_01820_gene;locus_tag=GCA000144955_01820
contig_1	Pyrodigal	CDS	1920634	1920984	.	+	0	ID=GCA000144955_01820;Name=tyrosine-type recombinase/integrase;locus_tag=GCA000144955_01820;product=tyrosine-type recombinase/integrase;Parent=GCA000144955_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F4D7E5A
contig_1	tRNAscan-SE	gene	1921110	1921198	.	-	.	ID=GCA000144955_01821_gene;locus_tag=GCA000144955_01821;gene=trnS
contig_1	tRNAscan-SE	tRNA	1921110	1921198	.	-	.	ID=GCA000144955_01821;Name=tRNA-Ser(gga);locus_tag=GCA000144955_01821;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000144955_01821_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1921253	1921324	.	-	.	ID=GCA000144955_01822_gene;locus_tag=GCA000144955_01822;gene=trnE
contig_1	tRNAscan-SE	tRNA	1921253	1921324	.	-	.	ID=GCA000144955_01822;Name=tRNA-Glu(ttc);locus_tag=GCA000144955_01822;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000144955_01822_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	1921326	1921400	.	-	.	ID=GCA000144955_01823_gene;locus_tag=GCA000144955_01823;gene=trnN
contig_1	tRNAscan-SE	tRNA	1921326	1921400	.	-	.	ID=GCA000144955_01823;Name=tRNA-Asn(gtt);locus_tag=GCA000144955_01823;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000144955_01823_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	tRNAscan-SE	gene	1921418	1921491	.	-	.	ID=GCA000144955_01824_gene;locus_tag=GCA000144955_01824;gene=trnG
contig_1	tRNAscan-SE	tRNA	1921418	1921491	.	-	.	ID=GCA000144955_01824;Name=tRNA-Gly(tcc);locus_tag=GCA000144955_01824;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000144955_01824_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1921507	1921582	.	-	.	ID=GCA000144955_01825_gene;locus_tag=GCA000144955_01825;gene=trnH
contig_1	tRNAscan-SE	tRNA	1921507	1921582	.	-	.	ID=GCA000144955_01825;Name=tRNA-His(gtg);locus_tag=GCA000144955_01825;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000144955_01825_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	1921596	1921668	.	-	.	ID=GCA000144955_01826_gene;locus_tag=GCA000144955_01826;gene=trnF
contig_1	tRNAscan-SE	tRNA	1921596	1921668	.	-	.	ID=GCA000144955_01826;Name=tRNA-Phe(gaa);locus_tag=GCA000144955_01826;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000144955_01826_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	1921685	1921760	.	-	.	ID=GCA000144955_01827_gene;locus_tag=GCA000144955_01827;gene=trnD
contig_1	tRNAscan-SE	tRNA	1921685	1921760	.	-	.	ID=GCA000144955_01827;Name=tRNA-Asp(gtc);locus_tag=GCA000144955_01827;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000144955_01827_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1921781	1921854	.	-	.	ID=GCA000144955_01828_gene;locus_tag=GCA000144955_01828;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1921781	1921854	.	-	.	ID=GCA000144955_01828;Name=tRNA-fMet(cat);locus_tag=GCA000144955_01828;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000144955_01828_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Infernal	gene	1921835	1921929	.	-	.	ID=GCA000144955_01829_gene;locus_tag=GCA000144955_01829;gene=S774
contig_1	Infernal	ncRNA	1921835	1921929	4.3e-15	-	.	ID=GCA000144955_01829;Name=Staphylococcus sRNA 774;locus_tag=GCA000144955_01829;product=Staphylococcus sRNA 774;Dbxref=RFAM:RF02896;Parent=GCA000144955_01829_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02896
contig_1	Pyrodigal	gene	1922351	1922905	.	-	.	ID=GCA000144955_01830_gene;locus_tag=GCA000144955_01830;gene=ydeN
contig_1	Pyrodigal	CDS	1922351	1922905	.	-	0	ID=GCA000144955_01830;Name=Serine hydrolase family protein;locus_tag=GCA000144955_01830;product=Serine hydrolase family protein;gene=ydeN;Parent=GCA000144955_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3545,COG:R,RefSeq:WP_000132890.1,SO:0001217,UniParc:UPI00000D7833,UniRef:UniRef100_A0A0H3KHA1,UniRef:UniRef50_Q2FXA7,UniRef:UniRef90_Q2FXA7
contig_1	Pyrodigal	gene	1923226	1924626	.	-	.	ID=GCA000144955_01831_gene;locus_tag=GCA000144955_01831;gene=hemY
contig_1	Pyrodigal	CDS	1923226	1924626	.	-	0	ID=GCA000144955_01831;Name=protoporphyrinogen oxidase;locus_tag=GCA000144955_01831;product=protoporphyrinogen oxidase;Dbxref=GO:0004729,GO:0005737,GO:0006779,GO:0006783,GO:0016491;gene=hemY;Parent=GCA000144955_01831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1232,COG:H,RefSeq:WP_000167548.1,SO:0001217,UniParc:UPI0001DD935B,UniRef:UniRef100_UPI0001DD935B,UniRef:UniRef50_Q2FXA5,UniRef:UniRef90_Q2FXA5;ec_number=1.3.3.4
contig_1	Pyrodigal	gene	1924650	1925573	.	-	.	ID=GCA000144955_01832_gene;locus_tag=GCA000144955_01832;gene=hemH
contig_1	Pyrodigal	CDS	1924650	1925573	.	-	0	ID=GCA000144955_01832;Name=ferrochelatase;locus_tag=GCA000144955_01832;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0006779,GO:0006783,GO:0046872;gene=hemH;Parent=GCA000144955_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_000162883.1,SO:0001217,UniParc:UPI0001DD935C,UniRef:UniRef100_UPI0001DD935C,UniRef:UniRef50_P32396,UniRef:UniRef90_Q2FXA4;ec_number=4.99.1.9
contig_1	Pyrodigal	gene	1925631	1926668	.	-	.	ID=GCA000144955_01833_gene;locus_tag=GCA000144955_01833;gene=hemE
contig_1	Pyrodigal	CDS	1925631	1926668	.	-	0	ID=GCA000144955_01833;Name=uroporphyrinogen decarboxylase;locus_tag=GCA000144955_01833;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0005829,GO:0006779,GO:0006782;gene=hemE;Parent=GCA000144955_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0407,COG:H,KEGG:K01599,RefSeq:WP_000233534.1,SO:0001217,UniParc:UPI0001DD935D,UniRef:UniRef100_UPI0001DD935D,UniRef:UniRef50_P32395,UniRef:UniRef90_Q2FXA3;ec_number=4.1.1.37
contig_1	Pyrodigal	gene	1926929	1927432	.	+	.	ID=GCA000144955_01834_gene;locus_tag=GCA000144955_01834;gene=traP
contig_1	Pyrodigal	CDS	1926929	1927432	.	+	0	ID=GCA000144955_01834;Name=signal transduction protein TRAP;locus_tag=GCA000144955_01834;product=signal transduction protein TRAP;Dbxref=GO:0016020;gene=traP;Parent=GCA000144955_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000737976,BlastRules:WP_001829811,RefSeq:WP_000737983.1,SO:0001217,UniParc:UPI00000B2072,UniRef:UniRef100_Q6GFM2,UniRef:UniRef50_Q2G2F3,UniRef:UniRef90_Q6GFM2
contig_1	Pyrodigal	gene	1927556	1928779	.	-	.	ID=GCA000144955_01835_gene;locus_tag=GCA000144955_01835;gene=ecsB
contig_1	Pyrodigal	CDS	1927556	1928779	.	-	0	ID=GCA000144955_01835;Name=ABC transporter permease EcsB;locus_tag=GCA000144955_01835;product=ABC transporter permease EcsB;gene=ecsB;Parent=GCA000144955_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4473,COG:U,KEGG:K25157,RefSeq:WP_001245756.1,SO:0001217,UniParc:UPI0001DD935E,UniRef:UniRef100_UPI0001DD935E,UniRef:UniRef50_Q2G2F2,UniRef:UniRef90_Q2G2F2
contig_1	Pyrodigal	gene	1928772	1929512	.	-	.	ID=GCA000144955_01836_gene;locus_tag=GCA000144955_01836;gene=rbbA
contig_1	Pyrodigal	CDS	1928772	1929512	.	-	0	ID=GCA000144955_01836;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_01836;product=ABC transporter ATP-binding protein;gene=rbbA;Parent=GCA000144955_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000216874.1,SO:0001217,UniParc:UPI00000CABDD,UniRef:UniRef100_A0A7Z7W2G2,UniRef:UniRef50_A0A0M9FN87,UniRef:UniRef90_A0A8G2HXZ9
contig_1	Pyrodigal	gene	1929646	1930068	.	+	.	ID=GCA000144955_01837_gene;locus_tag=GCA000144955_01837;gene=hinT
contig_1	Pyrodigal	CDS	1929646	1930068	.	+	0	ID=GCA000144955_01837;Name=HIT domain-containing protein;locus_tag=GCA000144955_01837;product=HIT domain-containing protein;gene=hinT;Parent=GCA000144955_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_000004981.1,SO:0001217,UniParc:UPI00000D76E8,UniRef:UniRef100_Q2G2F0,UniRef:UniRef50_A0A1D2KB85,UniRef:UniRef90_Q2G2F0
contig_1	Pyrodigal	gene	1930210	1930575	.	+	.	ID=GCA000144955_01838_gene;locus_tag=GCA000144955_01838;gene=gvpP
contig_1	Pyrodigal	CDS	1930210	1930575	.	+	0	ID=GCA000144955_01838;Name=YtxH domain-containing protein;locus_tag=GCA000144955_01838;product=YtxH domain-containing protein;gene=gvpP;Parent=GCA000144955_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4980,COG:R,RefSeq:WP_000648118.1,SO:0001217,UniParc:UPI000005431B,UniRef:UniRef100_Q2G2T0,UniRef:UniRef50_A0A1S2MI30,UniRef:UniRef90_Q2G2T0
contig_1	Pyrodigal	gene	1931308	1931865	.	+	.	ID=GCA000144955_01839_gene;locus_tag=GCA000144955_01839
contig_1	Pyrodigal	CDS	1931308	1931865	.	+	0	ID=GCA000144955_01839;Name=DUF3267 domain-containing protein;locus_tag=GCA000144955_01839;product=DUF3267 domain-containing protein;Parent=GCA000144955_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477958.1,SO:0001217,UniParc:UPI0001DD935F,UniRef:UniRef100_UPI0001DD935F,UniRef:UniRef50_Q2G2S9,UniRef:UniRef90_Q2G2S9
contig_1	Pyrodigal	gene	1932070	1933032	.	+	.	ID=GCA000144955_01840_gene;locus_tag=GCA000144955_01840;gene=prsA
contig_1	Pyrodigal	CDS	1932070	1933032	.	+	0	ID=GCA000144955_01840;Name=Foldase protein PrsA;locus_tag=GCA000144955_01840;product=Foldase protein PrsA;Dbxref=GO:0005886,GO:0006457,GO:0140839,GO:0140840;gene=prsA;Parent=GCA000144955_01840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_000782129.1,SO:0001217,UniParc:UPI0001DD9360,UniRef:UniRef100_UPI0001DD9360,UniRef:UniRef50_Q2G2S6,UniRef:UniRef90_Q2G2S6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1933152	1934093	.	-	.	ID=GCA000144955_01841_gene;locus_tag=GCA000144955_01841;gene=yhaM
contig_1	Pyrodigal	CDS	1933152	1934093	.	-	0	ID=GCA000144955_01841;Name=3'-5' exoribonuclease YhaM;locus_tag=GCA000144955_01841;product=3'-5' exoribonuclease YhaM;gene=yhaM;Parent=GCA000144955_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3481,COG:J,KEGG:K03698,RefSeq:WP_001244175.1,SO:0001217,UniParc:UPI0000052249,UniRef:UniRef100_Q2G2T1,UniRef:UniRef50_Q9KDN6,UniRef:UniRef90_Q2G2T1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1934090	1937026	.	-	.	ID=GCA000144955_01842_gene;locus_tag=GCA000144955_01842;gene=yhaN
contig_1	Pyrodigal	CDS	1934090	1937026	.	-	0	ID=GCA000144955_01842;Name=putative protein YhaN AAA domain-containing protein;locus_tag=GCA000144955_01842;product=putative protein YhaN AAA domain-containing protein;gene=yhaN;Parent=GCA000144955_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4717,COG:S,RefSeq:WP_000584635.1,SO:0001217,UniParc:UPI0001DD9361,UniRef:UniRef100_UPI0001DD9361,UniRef:UniRef50_B9DMY3,UniRef:UniRef90_Q2G2S8
contig_1	Pyrodigal	gene	1937016	1938212	.	-	.	ID=GCA000144955_01843_gene;locus_tag=GCA000144955_01843;gene=sbcD
contig_1	Pyrodigal	CDS	1937016	1938212	.	-	0	ID=GCA000144955_01843;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000144955_01843;product=Calcineurin-like phosphoesterase domain-containing protein;gene=sbcD;Parent=GCA000144955_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000238227.1,SO:0001217,UniParc:UPI0000054317,UniRef:UniRef100_Q2G2S7,UniRef:UniRef50_Q2G2S7,UniRef:UniRef90_Q2G2S7
contig_1	Pyrodigal	gene	1938984	1939328	.	-	.	ID=GCA000144955_01844_gene;locus_tag=GCA000144955_01844;gene=ylbF
contig_1	Pyrodigal	CDS	1938984	1939328	.	-	0	ID=GCA000144955_01844;Name=YlbF/YmcA family competence regulator;locus_tag=GCA000144955_01844;product=YlbF/YmcA family competence regulator;gene=ylbF;Parent=GCA000144955_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,RefSeq:WP_000290301.1,SO:0001217,UniParc:UPI0000054315,UniRef:UniRef100_Q2FXA0,UniRef:UniRef50_Q2FXA0,UniRef:UniRef90_Q2FXA0
contig_1	Pyrodigal	gene	1939397	1940521	.	-	.	ID=GCA000144955_01845_gene;locus_tag=GCA000144955_01845;gene=yheB
contig_1	Pyrodigal	CDS	1939397	1940521	.	-	0	ID=GCA000144955_01845;Name=UPF0754 membrane protein SAOUHSC_01978;locus_tag=GCA000144955_01845;product=UPF0754 membrane protein SAOUHSC_01978;Dbxref=GO:0005886;gene=yheB;Parent=GCA000144955_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4399,COG:S,RefSeq:WP_000992528.1,SO:0001217,UniParc:UPI0001DD9362,UniRef:UniRef100_UPI0001DD9362,UniRef:UniRef50_Q2FX99,UniRef:UniRef90_Q2FX99
contig_1	Pyrodigal	gene	1940700	1941164	.	-	.	ID=GCA000144955_01846_gene;locus_tag=GCA000144955_01846;gene=xRE
contig_1	Pyrodigal	CDS	1940700	1941164	.	-	0	ID=GCA000144955_01846;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_01846;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000144955_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_000375864.1,SO:0001217,UniParc:UPI00000D780E,UniRef:UniRef100_Q2FX98,UniRef:UniRef50_Q2FX98,UniRef:UniRef90_Q2FX98
contig_1	Pyrodigal	gene	1941519	1942142	.	-	.	ID=GCA000144955_01847_gene;locus_tag=GCA000144955_01847;gene=citB
contig_1	Pyrodigal	CDS	1941519	1942142	.	-	0	ID=GCA000144955_01847;Name=DNA-binding response regulator;locus_tag=GCA000144955_01847;product=DNA-binding response regulator;gene=citB;Parent=GCA000144955_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_001045133.1,SO:0001217,UniParc:UPI0000054A4B,UniRef:UniRef100_Q2FX97,UniRef:UniRef50_S2XG46,UniRef:UniRef90_A0A2W2R098
contig_1	Pyrodigal	gene	1942164	1943276	.	-	.	ID=GCA000144955_01848_gene;locus_tag=GCA000144955_01848;gene=comP
contig_1	Pyrodigal	CDS	1942164	1943276	.	-	0	ID=GCA000144955_01848;Name=histidine kinase;locus_tag=GCA000144955_01848;product=histidine kinase;gene=comP;Parent=GCA000144955_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,RefSeq:WP_000437967.1,SO:0001217,UniParc:UPI00003B17C9,UniRef:UniRef100_Q2FX96,UniRef:UniRef50_A0A380G577,UniRef:UniRef90_A0A077UMX2
contig_1	Pyrodigal	gene	1943439	1944260	.	+	.	ID=GCA000144955_01849_gene;locus_tag=GCA000144955_01849;gene=rluA
contig_1	Pyrodigal	CDS	1943439	1944260	.	+	0	ID=GCA000144955_01849;Name=Pseudouridine synthase;locus_tag=GCA000144955_01849;product=Pseudouridine synthase;gene=rluA;Parent=GCA000144955_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669379.1,SO:0001217,UniParc:UPI0001DD9510,UniRef:UniRef100_UPI0001DD9510,UniRef:UniRef50_A0A239YUZ3,UniRef:UniRef90_A0A7U7PYN7
contig_1	Pyrodigal	gene	1944724	1946109	.	-	.	ID=GCA000144955_01850_gene;locus_tag=GCA000144955_01850;gene=fumC
contig_1	Pyrodigal	CDS	1944724	1946109	.	-	0	ID=GCA000144955_01850;Name=class II fumarate hydratase;locus_tag=GCA000144955_01850;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA000144955_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_000116242.1,SO:0001217,UniParc:UPI0001DD9511,UniRef:UniRef100_UPI0001DD9511,UniRef:UniRef50_P64172,UniRef:UniRef90_P64172;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1946305	1946700	.	-	.	ID=GCA000144955_01851_gene;locus_tag=GCA000144955_01851
contig_1	Pyrodigal	CDS	1946305	1946700	.	-	0	ID=GCA000144955_01851;Name=DUF2975 domain-containing protein;locus_tag=GCA000144955_01851;product=DUF2975 domain-containing protein;Parent=GCA000144955_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000901024.1,SO:0001217,UniParc:UPI0001DD9512,UniRef:UniRef100_UPI0001DD9512,UniRef:UniRef50_Q2FX93,UniRef:UniRef90_Q2FX93
contig_1	Pyrodigal	gene	1947477	1947629	.	-	.	ID=GCA000144955_01852_gene;locus_tag=GCA000144955_01852
contig_1	Pyrodigal	CDS	1947477	1947629	.	-	0	ID=GCA000144955_01852;Name=SAS053 family DNA gyrase inhibitor;locus_tag=GCA000144955_01852;product=SAS053 family DNA gyrase inhibitor;Dbxref=GO:0090729;Parent=GCA000144955_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000031108.1,SO:0001217,UniParc:UPI00000D7729,UniRef:UniRef100_Q2FX91,UniRef:UniRef50_Q2FX91,UniRef:UniRef90_Q2FX91
contig_1	Pyrodigal	gene	1947654	1948253	.	-	.	ID=GCA000144955_01853_gene;locus_tag=GCA000144955_01853;gene=nagB
contig_1	Pyrodigal	CDS	1947654	1948253	.	-	0	ID=GCA000144955_01853;Name=Glucosamine-6-phosphate isomerase;locus_tag=GCA000144955_01853;product=Glucosamine-6-phosphate isomerase;gene=nagB;Parent=GCA000144955_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_001251216.1,SO:0001217,UniParc:UPI0001DD9514,UniRef:UniRef100_UPI0001DD9514,UniRef:UniRef50_Q2FX90,UniRef:UniRef90_Q2FX90
contig_1	Pyrodigal	gene	1948412	1948882	.	-	.	ID=GCA000144955_01854_gene;locus_tag=GCA000144955_01854;gene=trmL
contig_1	Pyrodigal	CDS	1948412	1948882	.	-	0	ID=GCA000144955_01854;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA000144955_01854;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0006400,GO:0008175;gene=trmL;Parent=GCA000144955_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_000181397.1,SO:0001217,UniParc:UPI0001DD9515,UniRef:UniRef100_UPI0001DD9515,UniRef:UniRef50_A2RKW7,UniRef:UniRef90_Q2FX89;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	1948887	1950014	.	-	.	ID=GCA000144955_01855_gene;locus_tag=GCA000144955_01855;gene=queG
contig_1	Pyrodigal	CDS	1948887	1950014	.	-	0	ID=GCA000144955_01855;Name=tRNA epoxyqueuosine(34) reductase QueG;locus_tag=GCA000144955_01855;product=tRNA epoxyqueuosine(34) reductase QueG;Dbxref=GO:0005737,GO:0006400,GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queG;Parent=GCA000144955_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1600,COG:J,KEGG:K18979,RefSeq:WP_000379992.1,SO:0001217,UniParc:UPI0001DD9516,UniRef:UniRef100_UPI0001DD9516,UniRef:UniRef50_P97030,UniRef:UniRef90_Q2FX88;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	1950165	1950893	.	-	.	ID=GCA000144955_01856_gene;locus_tag=GCA000144955_01856;gene=glnQ
contig_1	Pyrodigal	CDS	1950165	1950893	.	-	0	ID=GCA000144955_01856;Name=Glutamine transport ATP-binding protein glnQ;locus_tag=GCA000144955_01856;product=Glutamine transport ATP-binding protein glnQ;gene=glnQ;Parent=GCA000144955_01856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_001144055.1,SO:0001217,UniParc:UPI0000054AAF,UniRef:UniRef100_Q2FX87,UniRef:UniRef50_W0QFA6,UniRef:UniRef90_A0A2S6DLA3
contig_1	Pyrodigal	gene	1950880	1952337	.	-	.	ID=GCA000144955_01857_gene;locus_tag=GCA000144955_01857;gene=hisJ
contig_1	Pyrodigal	CDS	1950880	1952337	.	-	0	ID=GCA000144955_01857;Name=ABC transporter%2C permease protein%2C putative;locus_tag=GCA000144955_01857;product=ABC transporter%2C permease protein%2C putative;gene=hisJ;Parent=GCA000144955_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000649909.1,SO:0001217,UniParc:UPI0001DD9517,UniRef:UniRef100_UPI0001DD9517,UniRef:UniRef50_A0A239YWZ0,UniRef:UniRef90_Q2FX86
contig_1	Pyrodigal	gene	1952596	1953657	.	-	.	ID=GCA000144955_01858_gene;locus_tag=GCA000144955_01858;gene=pfoR
contig_1	Pyrodigal	CDS	1952596	1953657	.	-	0	ID=GCA000144955_01858;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000144955_01858;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000144955_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000063550.1,SO:0001217,UniParc:UPI0001DD9518,UniRef:UniRef100_UPI0001DD9518,UniRef:UniRef50_B9DMY0,UniRef:UniRef90_A0A6B0D056
contig_1	tRNAscan-SE	gene	1954206	1954289	.	-	.	ID=GCA000144955_01859_gene;locus_tag=GCA000144955_01859;gene=trnL
contig_1	tRNAscan-SE	tRNA	1954206	1954289	.	-	.	ID=GCA000144955_01859;Name=tRNA-Leu(caa);locus_tag=GCA000144955_01859;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000144955_01859_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1954328	1954402	.	-	.	ID=GCA000144955_01860_gene;locus_tag=GCA000144955_01860;gene=trnG
contig_1	tRNAscan-SE	tRNA	1954328	1954402	.	-	.	ID=GCA000144955_01860;Name=tRNA-Gly(tcc);locus_tag=GCA000144955_01860;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000144955_01860_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1954416	1954490	.	-	.	ID=GCA000144955_01861_gene;locus_tag=GCA000144955_01861;gene=trnG;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	1954416	1954490	.	-	.	ID=GCA000144955_01861;Name=tRNA-Gly(tcc);locus_tag=GCA000144955_01861;product=tRNA-Gly(tcc);gene=trnG;pseudogene=unknown;anti_codon=tcc;amino_acid=Gly;Parent=GCA000144955_01861_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1954506	1954580	.	-	.	ID=GCA000144955_01862_gene;locus_tag=GCA000144955_01862;gene=trnG
contig_1	tRNAscan-SE	tRNA	1954506	1954580	.	-	.	ID=GCA000144955_01862;Name=tRNA-Gly(tcc);locus_tag=GCA000144955_01862;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000144955_01862_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1954588	1954661	.	-	.	ID=GCA000144955_01863_gene;locus_tag=GCA000144955_01863;gene=trnC
contig_1	tRNAscan-SE	tRNA	1954588	1954661	.	-	.	ID=GCA000144955_01863;Name=tRNA-Cys(gca);locus_tag=GCA000144955_01863;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000144955_01863_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	1954667	1954738	.	-	.	ID=GCA000144955_01864_gene;locus_tag=GCA000144955_01864;gene=trnQ
contig_1	tRNAscan-SE	tRNA	1954667	1954738	.	-	.	ID=GCA000144955_01864;Name=tRNA-Gln(ttg);locus_tag=GCA000144955_01864;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000144955_01864_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	1954750	1954822	.	-	.	ID=GCA000144955_01865_gene;locus_tag=GCA000144955_01865;gene=trnH
contig_1	tRNAscan-SE	tRNA	1954750	1954822	.	-	.	ID=GCA000144955_01865;Name=tRNA-His(gtg);locus_tag=GCA000144955_01865;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000144955_01865_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	1954825	1954898	.	-	.	ID=GCA000144955_01866_gene;locus_tag=GCA000144955_01866;gene=trnW
contig_1	tRNAscan-SE	tRNA	1954825	1954898	.	-	.	ID=GCA000144955_01866;Name=tRNA-Trp(cca);locus_tag=GCA000144955_01866;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000144955_01866_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	tRNAscan-SE	gene	1954914	1954994	.	-	.	ID=GCA000144955_01867_gene;locus_tag=GCA000144955_01867;gene=trnY
contig_1	tRNAscan-SE	tRNA	1954914	1954994	.	-	.	ID=GCA000144955_01867;Name=tRNA-Tyr(gta);locus_tag=GCA000144955_01867;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000144955_01867_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	1955000	1955075	.	-	.	ID=GCA000144955_01868_gene;locus_tag=GCA000144955_01868;gene=trnT
contig_1	tRNAscan-SE	tRNA	1955000	1955075	.	-	.	ID=GCA000144955_01868;Name=tRNA-Thr(tgt);locus_tag=GCA000144955_01868;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000144955_01868_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	1955083	1955155	.	-	.	ID=GCA000144955_01869_gene;locus_tag=GCA000144955_01869;gene=trnF
contig_1	tRNAscan-SE	tRNA	1955083	1955155	.	-	.	ID=GCA000144955_01869;Name=tRNA-Phe(gaa);locus_tag=GCA000144955_01869;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000144955_01869_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	1955174	1955249	.	-	.	ID=GCA000144955_01870_gene;locus_tag=GCA000144955_01870;gene=trnD
contig_1	tRNAscan-SE	tRNA	1955174	1955249	.	-	.	ID=GCA000144955_01870;Name=tRNA-Asp(gtc);locus_tag=GCA000144955_01870;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000144955_01870_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1955259	1955332	.	-	.	ID=GCA000144955_01871_gene;locus_tag=GCA000144955_01871;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1955259	1955332	.	-	.	ID=GCA000144955_01871;Name=tRNA-fMet(cat);locus_tag=GCA000144955_01871;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000144955_01871_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	1955347	1955439	.	-	.	ID=GCA000144955_01872_gene;locus_tag=GCA000144955_01872;gene=trnS
contig_1	tRNAscan-SE	tRNA	1955347	1955439	.	-	.	ID=GCA000144955_01872;Name=tRNA-Ser(tga);locus_tag=GCA000144955_01872;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000144955_01872_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1955478	1955553	.	-	.	ID=GCA000144955_01873_gene;locus_tag=GCA000144955_01873;gene=trnD
contig_1	tRNAscan-SE	tRNA	1955478	1955553	.	-	.	ID=GCA000144955_01873;Name=tRNA-Asp(gtc);locus_tag=GCA000144955_01873;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000144955_01873_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1955564	1955653	.	-	.	ID=GCA000144955_01874_gene;locus_tag=GCA000144955_01874;gene=trnS
contig_1	tRNAscan-SE	tRNA	1955564	1955653	.	-	.	ID=GCA000144955_01874;Name=tRNA-Ser(tga);locus_tag=GCA000144955_01874;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000144955_01874_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1955663	1955736	.	-	.	ID=GCA000144955_01875_gene;locus_tag=GCA000144955_01875;gene=trnI
contig_1	tRNAscan-SE	tRNA	1955663	1955736	.	-	.	ID=GCA000144955_01875;Name=tRNA-Ile2(cat);locus_tag=GCA000144955_01875;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000144955_01875_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	1955765	1955838	.	-	.	ID=GCA000144955_01876_gene;locus_tag=GCA000144955_01876;gene=trnM
contig_1	tRNAscan-SE	tRNA	1955765	1955838	.	-	.	ID=GCA000144955_01876;Name=tRNA-Met(cat);locus_tag=GCA000144955_01876;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000144955_01876_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	1955860	1955935	.	-	.	ID=GCA000144955_01877_gene;locus_tag=GCA000144955_01877;gene=trnA
contig_1	tRNAscan-SE	tRNA	1955860	1955935	.	-	.	ID=GCA000144955_01877;Name=tRNA-Ala(tgc);locus_tag=GCA000144955_01877;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000144955_01877_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	1955953	1956026	.	-	.	ID=GCA000144955_01878_gene;locus_tag=GCA000144955_01878;gene=trnP
contig_1	tRNAscan-SE	tRNA	1955953	1956026	.	-	.	ID=GCA000144955_01878;Name=tRNA-Pro(tgg);locus_tag=GCA000144955_01878;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000144955_01878_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	1956036	1956109	.	-	.	ID=GCA000144955_01879_gene;locus_tag=GCA000144955_01879;gene=trnR
contig_1	tRNAscan-SE	tRNA	1956036	1956109	.	-	.	ID=GCA000144955_01879;Name=tRNA-Arg(acg);locus_tag=GCA000144955_01879;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000144955_01879_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	1956128	1956216	.	-	.	ID=GCA000144955_01880_gene;locus_tag=GCA000144955_01880;gene=trnL
contig_1	tRNAscan-SE	tRNA	1956128	1956216	.	-	.	ID=GCA000144955_01880;Name=tRNA-Leu(taa);locus_tag=GCA000144955_01880;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000144955_01880_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1956227	1956301	.	-	.	ID=GCA000144955_01881_gene;locus_tag=GCA000144955_01881;gene=trnG
contig_1	tRNAscan-SE	tRNA	1956227	1956301	.	-	.	ID=GCA000144955_01881;Name=tRNA-Gly(gcc);locus_tag=GCA000144955_01881;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000144955_01881_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1956305	1956386	.	-	.	ID=GCA000144955_01882_gene;locus_tag=GCA000144955_01882;gene=trnL
contig_1	tRNAscan-SE	tRNA	1956305	1956386	.	-	.	ID=GCA000144955_01882;Name=tRNA-Leu(tag);locus_tag=GCA000144955_01882;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000144955_01882_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1956390	1956465	.	-	.	ID=GCA000144955_01883_gene;locus_tag=GCA000144955_01883;gene=trnK
contig_1	tRNAscan-SE	tRNA	1956390	1956465	.	-	.	ID=GCA000144955_01883;Name=tRNA-Lys(ttt);locus_tag=GCA000144955_01883;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000144955_01883_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	1956471	1956546	.	-	.	ID=GCA000144955_01884_gene;locus_tag=GCA000144955_01884;gene=trnT
contig_1	tRNAscan-SE	tRNA	1956471	1956546	.	-	.	ID=GCA000144955_01884;Name=tRNA-Thr(tgt);locus_tag=GCA000144955_01884;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000144955_01884_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	1956563	1956638	.	-	.	ID=GCA000144955_01885_gene;locus_tag=GCA000144955_01885;gene=trnV
contig_1	tRNAscan-SE	tRNA	1956563	1956638	.	-	.	ID=GCA000144955_01885;Name=tRNA-Val(tac);locus_tag=GCA000144955_01885;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000144955_01885_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Infernal	gene	1956650	1956764	.	-	.	ID=GCA000144955_01886_gene;locus_tag=GCA000144955_01886;gene=rrf
contig_1	Infernal	rRNA	1956650	1956764	1.1e-14	-	.	ID=GCA000144955_01886;Name=5S ribosomal RNA;locus_tag=GCA000144955_01886;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_01886_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	1956837	1959759	.	-	.	ID=GCA000144955_01887_gene;locus_tag=GCA000144955_01887;gene=rrl
contig_1	Infernal	rRNA	1956837	1959759	1.4e-06	-	.	ID=GCA000144955_01887;Name=23S ribosomal RNA;locus_tag=GCA000144955_01887;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_01887_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	1960050	1960125	.	-	.	ID=GCA000144955_01888_gene;locus_tag=GCA000144955_01888;gene=trnA
contig_1	tRNAscan-SE	tRNA	1960050	1960125	.	-	.	ID=GCA000144955_01888;Name=tRNA-Ala(tgc);locus_tag=GCA000144955_01888;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000144955_01888_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	1960144	1960220	.	-	.	ID=GCA000144955_01889_gene;locus_tag=GCA000144955_01889;gene=trnI
contig_1	tRNAscan-SE	tRNA	1960144	1960220	.	-	.	ID=GCA000144955_01889;Name=tRNA-Ile(gat);locus_tag=GCA000144955_01889;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000144955_01889_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	1960312	1961863	.	-	.	ID=GCA000144955_01890_gene;locus_tag=GCA000144955_01890;gene=rrs
contig_1	Infernal	rRNA	1960312	1961863	1.5e-49	-	.	ID=GCA000144955_01890;Name=16S ribosomal RNA;locus_tag=GCA000144955_01890;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_01890_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	1962606	1963052	.	-	.	ID=GCA000144955_01891_gene;locus_tag=GCA000144955_01891;gene=perR
contig_1	Pyrodigal	CDS	1962606	1963052	.	-	0	ID=GCA000144955_01891;Name=peroxide-responsive transcriptional repressor PerR;locus_tag=GCA000144955_01891;product=peroxide-responsive transcriptional repressor PerR;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=perR;Parent=GCA000144955_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000110011,BlastRules:WP_002858684,BlastRules:WP_002987920,BlastRules:WP_003223285,COG:COG0735,COG:P,RefSeq:WP_000110011.1,SO:0001217,UniParc:UPI00000522DC,UniRef:UniRef100_Q2G282,UniRef:UniRef50_Q2G282,UniRef:UniRef90_Q2G282
contig_1	Pyrodigal	gene	1963149	1964108	.	-	.	ID=GCA000144955_01892_gene;locus_tag=GCA000144955_01892;gene=serA
contig_1	Pyrodigal	CDS	1963149	1964108	.	-	0	ID=GCA000144955_01892;Name=Hydroxyacid dehydrogenase;locus_tag=GCA000144955_01892;product=Hydroxyacid dehydrogenase;gene=serA;Parent=GCA000144955_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,SO:0001217,UniRef:UniRef50_Q2G281,UniRef:UniRef90_Q2G281
contig_1	Pyrodigal	gene	1964105	1964560	.	-	.	ID=GCA000144955_01893_gene;locus_tag=GCA000144955_01893;gene=bcp
contig_1	Pyrodigal	CDS	1964105	1964560	.	-	0	ID=GCA000144955_01893;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000144955_01893;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0016209,GO:0016491;gene=bcp;Parent=GCA000144955_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,RefSeq:WP_000939521.1,SO:0001217,UniParc:UPI00000544FC,UniRef:UniRef100_Q2G280,UniRef:UniRef50_Q5HN72,UniRef:UniRef90_A0A2K4AJG8;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1964641	1965930	.	+	.	ID=GCA000144955_01894_gene;locus_tag=GCA000144955_01894;gene=hemL2
contig_1	Pyrodigal	CDS	1964641	1965930	.	+	0	ID=GCA000144955_01894;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000144955_01894;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL2;Parent=GCA000144955_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_001011606.1,SO:0001217,UniParc:UPI0001DD951A,UniRef:UniRef100_UPI0001DD951A,UniRef:UniRef50_Q2G283,UniRef:UniRef90_Q2G283;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	1966172	1967317	.	+	.	ID=GCA000144955_01895_gene;locus_tag=GCA000144955_01895;gene=ygaE
contig_1	Pyrodigal	CDS	1966172	1967317	.	+	0	ID=GCA000144955_01895;Name=Aromatic acid exporter family protein;locus_tag=GCA000144955_01895;product=Aromatic acid exporter family protein;gene=ygaE;Parent=GCA000144955_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,SO:0001217,UniParc:UPI00015FD73E,UniRef:UniRef100_Q2G2N1,UniRef:UniRef50_Q2G2N1,UniRef:UniRef90_Q2G2N1
contig_1	Pyrodigal	gene	1967508	1969244	.	-	.	ID=GCA000144955_01896_gene;locus_tag=GCA000144955_01896;gene=mdlB
contig_1	Pyrodigal	CDS	1967508	1969244	.	-	0	ID=GCA000144955_01896;Name=SAV1866 family putative multidrug efflux ABC transporter;locus_tag=GCA000144955_01896;product=SAV1866 family putative multidrug efflux ABC transporter;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016887;gene=mdlB;Parent=GCA000144955_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000597238,COG:COG1132,COG:V,RefSeq:WP_000597245.1,SO:0001217,UniParc:UPI0001DD951B,UniRef:UniRef100_UPI0001DD951B,UniRef:UniRef50_P71082,UniRef:UniRef90_Q2G2M9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1969535	1970077	.	-	.	ID=GCA000144955_01897_gene;locus_tag=GCA000144955_01897;gene=ygaC
contig_1	Pyrodigal	CDS	1969535	1970077	.	-	0	ID=GCA000144955_01897;Name=Nucleoside triphosphate/diphosphate phosphatase;locus_tag=GCA000144955_01897;product=Nucleoside triphosphate/diphosphate phosphatase;Dbxref=GO:0000287,GO:0017110,GO:0017111;gene=ygaC;Parent=GCA000144955_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3557,COG:S,KEGG:K07586,RefSeq:WP_000251253.1,SO:0001217,UniParc:UPI00000D7652,UniRef:UniRef100_Q2G2M8,UniRef:UniRef50_Q2G2M8,UniRef:UniRef90_Q2G2M8;ec_number=3.6.1.6
contig_1	Pyrodigal	gene	1970380	1971417	.	-	.	ID=GCA000144955_01898_gene;locus_tag=GCA000144955_01898;gene=mutY
contig_1	Pyrodigal	CDS	1970380	1971417	.	-	0	ID=GCA000144955_01898;Name=A/G-specific adenine glycosylase;locus_tag=GCA000144955_01898;product=A/G-specific adenine glycosylase;Dbxref=GO:0006284,GO:0019104;gene=mutY;Parent=GCA000144955_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,RefSeq:WP_000284748.1,SO:0001217,UniParc:UPI0001DD951C,UniRef:UniRef100_UPI0001DD951C,UniRef:UniRef50_A0A7U7JQ99,UniRef:UniRef90_A0A0U1MPG3;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	1971569	1972546	.	+	.	ID=GCA000144955_01899_gene;locus_tag=GCA000144955_01899;gene=ybcI
contig_1	Pyrodigal	CDS	1971569	1972546	.	+	0	ID=GCA000144955_01899;Name=Metal-dependent hydrolase;locus_tag=GCA000144955_01899;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000144955_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000379099.1,SO:0001217,UniParc:UPI0001DD951D,UniRef:UniRef100_UPI0001DD951D,UniRef:UniRef50_Q2G2V9,UniRef:UniRef90_Q2G2V9
contig_1	Pyrodigal	gene	1972807	1973643	.	-	.	ID=GCA000144955_01900_gene;locus_tag=GCA000144955_01900;gene=tagG
contig_1	Pyrodigal	CDS	1972807	1973643	.	-	0	ID=GCA000144955_01900;Name=Teichoic acid translocation permease protein TagG;locus_tag=GCA000144955_01900;product=Teichoic acid translocation permease protein TagG;gene=tagG;Parent=GCA000144955_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G2V7,UniRef:UniRef90_Q2G2V7
contig_1	Pyrodigal	gene	1973652	1975169	.	-	.	ID=GCA000144955_01901_gene;locus_tag=GCA000144955_01901;gene=tagH
contig_1	Pyrodigal	CDS	1973652	1975169	.	-	0	ID=GCA000144955_01901;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_01901;product=ABC transporter domain-containing protein;gene=tagH;Parent=GCA000144955_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_000535833.1,SO:0001217,UniParc:UPI0001DD951F,UniRef:UniRef100_UPI0001DD951F,UniRef:UniRef50_Q2G2H3,UniRef:UniRef90_Q2G2H3
contig_1	Pyrodigal	gene	1975184	1975498	.	-	.	ID=GCA000144955_01902_gene;locus_tag=GCA000144955_01902
contig_1	Pyrodigal	CDS	1975184	1975498	.	-	0	ID=GCA000144955_01902;Name=Transcriptional regulator;locus_tag=GCA000144955_01902;product=Transcriptional regulator;Parent=GCA000144955_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435806.1,SO:0001217,UniParc:UPI00000D778E,UniRef:UniRef100_Q2G2H0,UniRef:UniRef50_G5JJ30,UniRef:UniRef90_G5JJ30
contig_1	Pyrodigal	gene	1975476	1976294	.	-	.	ID=GCA000144955_01903_gene;locus_tag=GCA000144955_01903;gene=recX
contig_1	Pyrodigal	CDS	1975476	1976294	.	-	0	ID=GCA000144955_01903;Name=recombination regulator RecX;locus_tag=GCA000144955_01903;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0006282;gene=recX;Parent=GCA000144955_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_001124422.1,SO:0001217,UniParc:UPI000013360F,UniRef:UniRef100_P66002,UniRef:UniRef50_Q2G2G9,UniRef:UniRef90_Q2G2G9
contig_1	Pyrodigal	gene	1976555	1977364	.	-	.	ID=GCA000144955_01904_gene;locus_tag=GCA000144955_01904;gene=sgtB
contig_1	Pyrodigal	CDS	1976555	1977364	.	-	0	ID=GCA000144955_01904;Name=monofunctional peptidoglycan glycosyltransferase SgtB;locus_tag=GCA000144955_01904;product=monofunctional peptidoglycan glycosyltransferase SgtB;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0030288,GO:0071555;gene=sgtB;Parent=GCA000144955_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000830377,COG:COG0744,COG:M,RefSeq:WP_000830380.1,SO:0001217,UniParc:UPI00000D7827,UniRef:UniRef100_Q93Q23,UniRef:UniRef50_Q93Q23,UniRef:UniRef90_Q93Q23;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1977704	1978219	.	-	.	ID=GCA000144955_01905_gene;locus_tag=GCA000144955_01905;gene=yajL
contig_1	Pyrodigal	CDS	1977704	1978219	.	-	0	ID=GCA000144955_01905;Name=putative protein SACOL1933;locus_tag=GCA000144955_01905;product=putative protein SACOL1933;gene=yajL;Parent=GCA000144955_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,RefSeq:WP_000163279.1,SO:0001217,UniParc:UPI0001DD9520,UniRef:UniRef100_UPI0001DD9520,UniRef:UniRef50_P0A0K3,UniRef:UniRef90_P0A0K3
contig_1	Pyrodigal	gene	1978349	1978510	.	-	.	ID=GCA000144955_01906_gene;locus_tag=GCA000144955_01906
contig_1	Pyrodigal	CDS	1978349	1978510	.	-	0	ID=GCA000144955_01906;Name=Cytosolic protein;locus_tag=GCA000144955_01906;product=Cytosolic protein;Parent=GCA000144955_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001005407.1,SO:0001217,UniParc:UPI00000544EF,UniRef:UniRef100_Q2G2H1,UniRef:UniRef50_A0A654BB04,UniRef:UniRef90_A0A654BB04
contig_1	Pyrodigal	gene	1978734	1979885	.	+	.	ID=GCA000144955_01907_gene;locus_tag=GCA000144955_01907;gene=yfkAB
contig_1	Pyrodigal	CDS	1978734	1979885	.	+	0	ID=GCA000144955_01907;Name=radical SAM/CxCxxxxC motif protein YfkAB;locus_tag=GCA000144955_01907;product=radical SAM/CxCxxxxC motif protein YfkAB;Dbxref=GO:0008152,GO:0051539,GO:1904047;gene=yfkAB;Parent=GCA000144955_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0535,COG:DH,RefSeq:WP_001089617.1,SO:0001217,UniParc:UPI0001DD9521,UniRef:UniRef100_UPI0001DD9521,UniRef:UniRef50_B9E7Z7,UniRef:UniRef90_A0AA40JNB2
contig_1	Pyrodigal	gene	1980145	1980675	.	-	.	ID=GCA000144955_01908_gene;locus_tag=GCA000144955_01908;gene=yciA
contig_1	Pyrodigal	CDS	1980145	1980675	.	-	0	ID=GCA000144955_01908;Name=HotDog ACOT-type domain-containing protein;locus_tag=GCA000144955_01908;product=HotDog ACOT-type domain-containing protein;gene=yciA;Parent=GCA000144955_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_000184381.1,SO:0001217,UniParc:UPI0001C0BCCC,UniRef:UniRef100_A0A0D1HN17,UniRef:UniRef50_A0A654BBY2,UniRef:UniRef90_Q2FX15
contig_1	Pyrodigal	gene	1980765	1982012	.	-	.	ID=GCA000144955_01909_gene;locus_tag=GCA000144955_01909;gene=ampS
contig_1	Pyrodigal	CDS	1980765	1982012	.	-	0	ID=GCA000144955_01909;Name=Aminopeptidase PepS;locus_tag=GCA000144955_01909;product=Aminopeptidase PepS;gene=ampS;Parent=GCA000144955_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2309,COG:E,SO:0001217,UniRef:UniRef50_A0A9N8IJS9,UniRef:UniRef90_A0A9N8IJS9
contig_1	Pyrodigal	gene	1982024	1982230	.	-	.	ID=GCA000144955_01910_gene;locus_tag=GCA000144955_01910;gene=yfkK
contig_1	Pyrodigal	CDS	1982024	1982230	.	-	0	ID=GCA000144955_01910;Name=UPF0435 protein SAHV_1865;locus_tag=GCA000144955_01910;product=UPF0435 protein SAHV_1865;gene=yfkK;Parent=GCA000144955_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4840,COG:S,SO:0001217,UniParc:UPI00000D766E,UniRef:UniRef100_Q7A4S2,UniRef:UniRef50_Q2FX13,UniRef:UniRef90_Q2FX13
contig_1	Pyrodigal	gene	1982371	1982835	.	+	.	ID=GCA000144955_01911_gene;locus_tag=GCA000144955_01911;gene=ptpA
contig_1	Pyrodigal	CDS	1982371	1982835	.	+	0	ID=GCA000144955_01911;Name=Low molecular weight protein-tyrosine-phosphatase PtpA;locus_tag=GCA000144955_01911;product=Low molecular weight protein-tyrosine-phosphatase PtpA;Dbxref=GO:0004726,GO:0005576,GO:0030946,GO:0140793;gene=ptpA;Parent=GCA000144955_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000228666.1,SO:0001217,UniParc:UPI000005449F,UniRef:UniRef100_Q2FX12,UniRef:UniRef50_Q2FX12,UniRef:UniRef90_Q2FX12;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	1982842	1983117	.	+	.	ID=GCA000144955_01912_gene;locus_tag=GCA000144955_01912;gene=ytxH
contig_1	Pyrodigal	CDS	1982842	1983117	.	+	0	ID=GCA000144955_01912;Name=YtxH domain-containing protein;locus_tag=GCA000144955_01912;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000144955_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000428173.1,SO:0001217,UniParc:UPI0001DD9523,UniRef:UniRef100_UPI0001DD9523,UniRef:UniRef50_A0A2K3ZIL3,UniRef:UniRef90_Q2FX11
contig_1	Pyrodigal	gene	1983395	1984612	.	+	.	ID=GCA000144955_01913_gene;locus_tag=GCA000144955_01913;gene=brkB
contig_1	Pyrodigal	CDS	1983395	1984612	.	+	0	ID=GCA000144955_01913;Name=Ribonuclease BN;locus_tag=GCA000144955_01913;product=Ribonuclease BN;gene=brkB;Parent=GCA000144955_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_045158466.1,SO:0001217,UniParc:UPI0005EAF747,UniRef:UniRef100_UPI0005EAF747,UniRef:UniRef50_A0A077UL04,UniRef:UniRef90_A0A077UL04
contig_1	Pyrodigal	gene	1984726	1985355	.	-	.	ID=GCA000144955_01914_gene;locus_tag=GCA000144955_01914;gene=vraR
contig_1	Pyrodigal	CDS	1984726	1985355	.	-	0	ID=GCA000144955_01914;Name=two-component system response regulator VraR;locus_tag=GCA000144955_01914;product=two-component system response regulator VraR;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=vraR;Parent=GCA000144955_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000153530,COG:COG2197,COG:TK,KEGG:K07694,RefSeq:WP_000153535.1,SO:0001217,UniParc:UPI000002E89F,UniRef:UniRef100_Q7A2Q1,UniRef:UniRef50_Q7A2Q1,UniRef:UniRef90_Q7A2Q1
contig_1	Pyrodigal	gene	1985345	1986388	.	-	.	ID=GCA000144955_01915_gene;locus_tag=GCA000144955_01915;gene=vraS
contig_1	Pyrodigal	CDS	1985345	1986388	.	-	0	ID=GCA000144955_01915;Name=Sensor protein VraS;locus_tag=GCA000144955_01915;product=Sensor protein VraS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0046983;gene=vraS;Parent=GCA000144955_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,KEGG:K07681,RefSeq:WP_001017131.1,SO:0001217,UniParc:UPI000005449B,UniRef:UniRef100_Q5HEN9,UniRef:UniRef50_Q7A2Q0,UniRef:UniRef90_Q7A2Q0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1986385	1987086	.	-	.	ID=GCA000144955_01916_gene;locus_tag=GCA000144955_01916;gene=liaF
contig_1	Pyrodigal	CDS	1986385	1987086	.	-	0	ID=GCA000144955_01916;Name=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;locus_tag=GCA000144955_01916;product=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;gene=liaF;Parent=GCA000144955_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4758,COG:T,KEGG:K11622,RefSeq:WP_000149064.1,SO:0001217,UniParc:UPI000005449A,UniRef:UniRef100_Q2FX07,UniRef:UniRef50_Q2FX07,UniRef:UniRef90_Q2FX07
contig_1	Pyrodigal	gene	1987101	1987487	.	-	.	ID=GCA000144955_01917_gene;locus_tag=GCA000144955_01917
contig_1	Pyrodigal	CDS	1987101	1987487	.	-	0	ID=GCA000144955_01917;Name=Staphylococcal protein;locus_tag=GCA000144955_01917;product=Staphylococcal protein;Parent=GCA000144955_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001110179.1,SO:0001217,UniParc:UPI00000D76F0,UniRef:UniRef100_Q2FX06,UniRef:UniRef50_G5JJT9,UniRef:UniRef90_Q2FX06
contig_1	Pyrodigal	gene	1987704	1988462	.	-	.	ID=GCA000144955_01918_gene;locus_tag=GCA000144955_01918;gene=map
contig_1	Pyrodigal	CDS	1987704	1988462	.	-	0	ID=GCA000144955_01918;Name=type I methionyl aminopeptidase;locus_tag=GCA000144955_01918;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0006508,GO:0046872,GO:0070006;gene=map;Parent=GCA000144955_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,RefSeq:WP_000636142.1,SO:0001217,UniParc:UPI0000054498,UniRef:UniRef100_Q5HEN6,UniRef:UniRef50_Q8CRU9,UniRef:UniRef90_Q5HEN6;ec_number=3.4.11.18
contig_1	Infernal	gene	1988615	1988860	.	+	.	ID=GCA000144955_01919_gene;locus_tag=GCA000144955_01919;gene=S35
contig_1	Infernal	ncRNA	1988615	1988860	2.9e-16	+	.	ID=GCA000144955_01919;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01919;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01919_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1988990	1989976	.	+	.	ID=GCA000144955_01920_gene;locus_tag=GCA000144955_01920;gene=ygaE
contig_1	Pyrodigal	CDS	1988990	1989976	.	+	0	ID=GCA000144955_01920;Name=UPF0421 protein SACOL1947;locus_tag=GCA000144955_01920;product=UPF0421 protein SACOL1947;Dbxref=GO:0005886;gene=ygaE;Parent=GCA000144955_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_000999713.1,SO:0001217,UniParc:UPI0000054495,UniRef:UniRef100_Q2FX03,UniRef:UniRef50_Q2FX03,UniRef:UniRef90_Q2FX03
contig_1	Pyrodigal	gene	1990165	1990578	.	-	.	ID=GCA000144955_01921_gene;locus_tag=GCA000144955_01921
contig_1	Pyrodigal	CDS	1990165	1990578	.	-	0	ID=GCA000144955_01921;Name=Cytosolic protein;locus_tag=GCA000144955_01921;product=Cytosolic protein;Parent=GCA000144955_01921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000805176.1,SO:0001217,UniParc:UPI00098F0887,UniRef:UniRef100_UPI00098F0887,UniRef:UniRef50_Q2FX02,UniRef:UniRef90_Q2FX02
contig_1	Pyrodigal	gene	1990803	1991534	.	-	.	ID=GCA000144955_01922_gene;locus_tag=GCA000144955_01922;gene=gatD
contig_1	Pyrodigal	CDS	1990803	1991534	.	-	0	ID=GCA000144955_01922;Name=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;locus_tag=GCA000144955_01922;product=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;Dbxref=GO:0004359,GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0140282;gene=gatD;Parent=GCA000144955_01922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3442,COG:R,KEGG:K07009,RefSeq:WP_000544973.1,SO:0001217,UniParc:UPI00003B17E1,UniRef:UniRef100_A0A7Z7R0J4,UniRef:UniRef50_A0A0H2WZ38,UniRef:UniRef90_A0A0H2WZ38;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	1991536	1992849	.	-	.	ID=GCA000144955_01923_gene;locus_tag=GCA000144955_01923;gene=murT
contig_1	Pyrodigal	CDS	1991536	1992849	.	-	0	ID=GCA000144955_01923;Name=lipid II isoglutaminyl synthase subunit MurT;locus_tag=GCA000144955_01923;product=lipid II isoglutaminyl synthase subunit MurT;Dbxref=GO:0005524,GO:0008270,GO:0008360,GO:0009252,GO:0016881,GO:0071555,GO:0140282;gene=murT;Parent=GCA000144955_01923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001250336,COG:COG0769,COG:M,KEGG:K23393,RefSeq:WP_001250323.1,SO:0001217,UniParc:UPI0001DD96D4,UniRef:UniRef100_UPI0001DD96D4,UniRef:UniRef50_A0A0H3JUU7,UniRef:UniRef90_A0A0H3JUU7;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	1993141	1993641	.	+	.	ID=GCA000144955_01924_gene;locus_tag=GCA000144955_01924;gene=ftnA
contig_1	Pyrodigal	CDS	1993141	1993641	.	+	0	ID=GCA000144955_01924;Name=H-type ferritin FtnA;locus_tag=GCA000144955_01924;product=H-type ferritin FtnA;Dbxref=GO:0004322,GO:0005829,GO:0006826,GO:0006880,GO:0008198,GO:0008199;gene=ftnA;Parent=GCA000144955_01924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000949467,COG:COG1528,COG:P,RefSeq:WP_000949467.1,SO:0001217,UniParc:UPI0000054490,UniRef:UniRef100_Q2FWZ8,UniRef:UniRef50_Q2FWZ8,UniRef:UniRef90_Q2FWZ8;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	1994032	1994586	.	+	.	ID=GCA000144955_01925_gene;locus_tag=GCA000144955_01925;gene=dnaQ
contig_1	Pyrodigal	CDS	1994032	1994586	.	+	0	ID=GCA000144955_01925;Name=DNA polymerase III polC-type;locus_tag=GCA000144955_01925;product=DNA polymerase III polC-type;gene=dnaQ;Parent=GCA000144955_01925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_000613737.1,SO:0001217,UniParc:UPI0001DD96D5,UniRef:UniRef100_UPI0001DD96D5,UniRef:UniRef50_Q4L7K7,UniRef:UniRef90_A0A2I7Y430
contig_1	Pyrodigal	gene	1994649	1995719	.	-	.	ID=GCA000144955_01926_gene;locus_tag=GCA000144955_01926;gene=dinB
contig_1	Pyrodigal	CDS	1994649	1995719	.	-	0	ID=GCA000144955_01926;Name=DNA polymerase IV;locus_tag=GCA000144955_01926;product=DNA polymerase IV;Dbxref=GO:0000287,GO:0003684,GO:0003887,GO:0005829,GO:0006261,GO:0006281,GO:0009432,GO:0042276;gene=dinB;Parent=GCA000144955_01926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_000140168.1,SO:0001217,UniParc:UPI0001DD96D6,UniRef:UniRef100_UPI0001DD96D6,UniRef:UniRef50_Q49YT9,UniRef:UniRef90_P63991;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1995966	1996496	.	-	.	ID=GCA000144955_01927_gene;locus_tag=GCA000144955_01927
contig_1	Pyrodigal	CDS	1995966	1996496	.	-	0	ID=GCA000144955_01927;Name=Permease;locus_tag=GCA000144955_01927;product=Permease;Parent=GCA000144955_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000548782.1,SO:0001217,UniParc:UPI0001DD96D7,UniRef:UniRef100_A0A380E5X3,UniRef:UniRef50_Q2FWZ4,UniRef:UniRef90_Q2FWZ4
contig_1	Pyrodigal	gene	1996666	1998027	.	-	.	ID=GCA000144955_01928_gene;locus_tag=GCA000144955_01928;gene=rlmD
contig_1	Pyrodigal	CDS	1996666	1998027	.	-	0	ID=GCA000144955_01928;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA000144955_01928;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0008649,GO:0046872,GO:0051539,GO:0070041,GO:0070475;gene=rlmD;Parent=GCA000144955_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03215,RefSeq:WP_001147876.1,SO:0001217,UniParc:UPI0001DD96D8,UniRef:UniRef100_UPI0001DD96D8,UniRef:UniRef50_Q8CRU6,UniRef:UniRef90_Q7A4Q9;ec_number=2.1.1.190
contig_1	Pyrodigal	gene	1998108	1999055	.	-	.	ID=GCA000144955_01929_gene;locus_tag=GCA000144955_01929;gene=dagK
contig_1	Pyrodigal	CDS	1998108	1999055	.	-	0	ID=GCA000144955_01929;Name=diacylglycerol kinase;locus_tag=GCA000144955_01929;product=diacylglycerol kinase;Dbxref=GO:0003951,GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=dagK;Parent=GCA000144955_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_001231458.1,SO:0001217,UniParc:UPI00003B17E7,UniRef:UniRef100_Q6GFF9,UniRef:UniRef50_Q6GFF9,UniRef:UniRef90_Q6GFF9;ec_number=2.7.1.107
contig_1	Infernal	gene	1999279	1999531	.	+	.	ID=GCA000144955_01930_gene;locus_tag=GCA000144955_01930;gene=S35
contig_1	Infernal	ncRNA	1999279	1999531	1.1e-16	+	.	ID=GCA000144955_01930;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_01930;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_01930_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1999934	2001361	.	-	.	ID=GCA000144955_01931_gene;locus_tag=GCA000144955_01931;gene=gatB
contig_1	Pyrodigal	CDS	1999934	2001361	.	-	0	ID=GCA000144955_01931;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;locus_tag=GCA000144955_01931;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;Dbxref=GO:0005524,GO:0006412,GO:0016884,GO:0050566,GO:0050567,GO:0070681;gene=gatB;Parent=GCA000144955_01931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0064,COG:J,KEGG:K02434,RefSeq:WP_000545370.1,SO:0001217,UniParc:UPI000012B162,UniRef:UniRef100_Q2FWZ0,UniRef:UniRef50_Q45486,UniRef:UniRef90_Q45486;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	2001374	2002831	.	-	.	ID=GCA000144955_01932_gene;locus_tag=GCA000144955_01932;gene=gatA
contig_1	Pyrodigal	CDS	2001374	2002831	.	-	0	ID=GCA000144955_01932;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;locus_tag=GCA000144955_01932;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0030956,GO:0050567;gene=gatA;Parent=GCA000144955_01932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0154,COG:J,KEGG:K02433,RefSeq:WP_000027928.1,SO:0001217,UniParc:UPI00003D0D85,UniRef:UniRef100_Q2FWY9,UniRef:UniRef50_O06491,UniRef:UniRef90_P63488;ec_number=6.3.5.7
contig_1	Pyrodigal	gene	2002833	2003135	.	-	.	ID=GCA000144955_01933_gene;locus_tag=GCA000144955_01933;gene=gatC
contig_1	Pyrodigal	CDS	2002833	2003135	.	-	0	ID=GCA000144955_01933;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;locus_tag=GCA000144955_01933;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0006450,GO:0030956,GO:0050566,GO:0050567,GO:0070681;gene=gatC;Parent=GCA000144955_01933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0721,COG:J,RefSeq:WP_000170162.1,SO:0001217,UniParc:UPI0000054485,UniRef:UniRef100_Q2FWY8,UniRef:UniRef50_Q2FWY8,UniRef:UniRef90_Q2FWY8;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	2003501	2005039	.	+	.	ID=GCA000144955_01934_gene;locus_tag=GCA000144955_01934;gene=putP
contig_1	Pyrodigal	CDS	2003501	2005039	.	+	0	ID=GCA000144955_01934;Name=sodium/proline symporter PutP;locus_tag=GCA000144955_01934;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0005886,GO:0006814,GO:0015193,GO:0015824,GO:0016020,GO:0031402;gene=putP;Parent=GCA000144955_01934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000957020.1,SO:0001217,UniParc:UPI00000D7825,UniRef:UniRef100_Q2FWY7,UniRef:UniRef50_Q2FWY7,UniRef:UniRef90_Q2FWY7
contig_1	Pyrodigal	gene	2005128	2006327	.	-	.	ID=GCA000144955_01935_gene;locus_tag=GCA000144955_01935;gene=camS
contig_1	Pyrodigal	CDS	2005128	2006327	.	-	0	ID=GCA000144955_01935;Name=CamS family sex pheromone protein;locus_tag=GCA000144955_01935;product=CamS family sex pheromone protein;gene=camS;Parent=GCA000144955_01935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4851,COG:R,RefSeq:WP_000831695.1,SO:0001217,UniParc:UPI00019CD78A,UniRef:UniRef100_A0A7Z7QZT6,UniRef:UniRef50_Q2FWY6,UniRef:UniRef90_Q2FWY6
contig_1	Pyrodigal	gene	2006340	2008343	.	-	.	ID=GCA000144955_01936_gene;locus_tag=GCA000144955_01936;gene=ligA
contig_1	Pyrodigal	CDS	2006340	2008343	.	-	0	ID=GCA000144955_01936;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000144955_01936;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000144955_01936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_000774566.1,SO:0001217,UniParc:UPI0001DD96D9,UniRef:UniRef100_UPI0001DD96D9,UniRef:UniRef50_Q837V6,UniRef:UniRef90_Q99SY3;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	2008347	2010539	.	-	.	ID=GCA000144955_01937_gene;locus_tag=GCA000144955_01937;gene=pcrA
contig_1	Pyrodigal	CDS	2008347	2010539	.	-	0	ID=GCA000144955_01937;Name=DNA helicase PcrA;locus_tag=GCA000144955_01937;product=DNA helicase PcrA;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005737,GO:0005829,GO:0006268,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=pcrA;Parent=GCA000144955_01937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,RefSeq:WP_000992924.1,SO:0001217,UniParc:UPI00000CAA08,UniRef:UniRef100_P64318,UniRef:UniRef50_Q53727,UniRef:UniRef90_Q53727;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	2010536	2011228	.	-	.	ID=GCA000144955_01938_gene;locus_tag=GCA000144955_01938;gene=pcrB
contig_1	Pyrodigal	CDS	2010536	2011228	.	-	0	ID=GCA000144955_01938;Name=heptaprenylglyceryl phosphate synthase;locus_tag=GCA000144955_01938;product=heptaprenylglyceryl phosphate synthase;Dbxref=GO:0000287,GO:0002094,GO:0046474;gene=pcrB;Parent=GCA000144955_01938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1646,COG:I,RefSeq:WP_000272067.1,SO:0001217,UniParc:UPI0001DD96DA,UniRef:UniRef100_UPI0001DD96DA,UniRef:UniRef50_Q53726,UniRef:UniRef90_Q53726;ec_number=2.5.1.n9
contig_1	Pyrodigal	gene	2011400	2011702	.	-	.	ID=GCA000144955_01939_gene;locus_tag=GCA000144955_01939;gene=yerC
contig_1	Pyrodigal	CDS	2011400	2011702	.	-	0	ID=GCA000144955_01939;Name=His repressor;locus_tag=GCA000144955_01939;product=His repressor;gene=yerC;Parent=GCA000144955_01939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4496,COG:R,RefSeq:WP_001165363.1,SO:0001217,UniParc:UPI000005447E,UniRef:UniRef100_Q2G1Y1,UniRef:UniRef50_Q7BVT7,UniRef:UniRef90_Q2G1Y1
contig_1	Pyrodigal	gene	2011811	2013106	.	-	.	ID=GCA000144955_01940_gene;locus_tag=GCA000144955_01940;gene=purB
contig_1	Pyrodigal	CDS	2011811	2013106	.	-	0	ID=GCA000144955_01940;Name=adenylosuccinate lyase;locus_tag=GCA000144955_01940;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0005829,GO:0006189,GO:0009152,GO:0044208,GO:0070626;gene=purB;Parent=GCA000144955_01940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_000572883.1,SO:0001217,UniParc:UPI0001DD96DB,UniRef:UniRef100_UPI0001DD96DB,UniRef:UniRef50_Q2G2S0,UniRef:UniRef90_Q2G2S0;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	2013966	2015132	.	+	.	ID=GCA000144955_01941_gene;locus_tag=GCA000144955_01941;gene=scpA
contig_1	Pyrodigal	CDS	2013966	2015132	.	+	0	ID=GCA000144955_01941;Name=cysteine protease staphopain A;locus_tag=GCA000144955_01941;product=cysteine protease staphopain A;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=scpA;Parent=GCA000144955_01941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000827761,RefSeq:WP_000827766.1,SO:0001217,UniParc:UPI0001DD96DC,UniRef:UniRef100_UPI0001DD96DC,UniRef:UniRef50_P81297,UniRef:UniRef90_P81297;ec_number=3.4.22.48
contig_1	Pyrodigal	gene	2015163	2015489	.	+	.	ID=GCA000144955_01942_gene;locus_tag=GCA000144955_01942
contig_1	Pyrodigal	CDS	2015163	2015489	.	+	0	ID=GCA000144955_01942;Name=Staphostatin A domain-containing protein;locus_tag=GCA000144955_01942;product=Staphostatin A domain-containing protein;Parent=GCA000144955_01942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000434533.1,SO:0001217,UniParc:UPI0001C0BCF6,UniRef:UniRef100_A0A0D1IAA3,UniRef:UniRef50_Q2G2R7,UniRef:UniRef90_Q2G2R7
contig_1	Pyrodigal	gene	2015783	2015956	.	-	.	ID=GCA000144955_01943_gene;locus_tag=GCA000144955_01943
contig_1	Pyrodigal	CDS	2015783	2015956	.	-	0	ID=GCA000144955_01943;Name=NETI motif-containing protein;locus_tag=GCA000144955_01943;product=NETI motif-containing protein;Parent=GCA000144955_01943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669863.1,SO:0001217,UniParc:UPI0001DD96DD,UniRef:UniRef100_A0AAE8PD35,UniRef:UniRef50_A0A0B5APK8,UniRef:UniRef90_Q2G2R6
contig_1	Pyrodigal	gene	2015937	2016539	.	-	.	ID=GCA000144955_01944_gene;locus_tag=GCA000144955_01944;gene=yebE
contig_1	Pyrodigal	CDS	2015937	2016539	.	-	0	ID=GCA000144955_01944;Name=UPF0316 protein SA1727;locus_tag=GCA000144955_01944;product=UPF0316 protein SA1727;Dbxref=GO:0005886;gene=yebE;Parent=GCA000144955_01944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4843,COG:S,RefSeq:WP_000011542.1,SO:0001217,UniParc:UPI00000D7723,UniRef:UniRef100_Q2G2R9,UniRef:UniRef50_Q2G2R9,UniRef:UniRef90_Q2G2R9
contig_1	Pyrodigal	gene	2016809	2017630	.	-	.	ID=GCA000144955_01945_gene;locus_tag=GCA000144955_01945;gene=nadE
contig_1	Pyrodigal	CDS	2016809	2017630	.	-	0	ID=GCA000144955_01945;Name=ammonia-dependent NAD(+) synthetase;locus_tag=GCA000144955_01945;product=ammonia-dependent NAD(+) synthetase;Dbxref=GO:0003952,GO:0004359,GO:0005524,GO:0005737,GO:0008795,GO:0009435,GO:0046872;gene=nadE;Parent=GCA000144955_01945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0171,COG:H,RefSeq:WP_000040872.1,SO:0001217,UniParc:UPI00005FE668,UniRef:UniRef100_Q2YU60,UniRef:UniRef50_Q88Z14,UniRef:UniRef90_P65506;ec_number=6.3.1.5
contig_1	Pyrodigal	gene	2017623	2019092	.	-	.	ID=GCA000144955_01946_gene;locus_tag=GCA000144955_01946;gene=pncB
contig_1	Pyrodigal	CDS	2017623	2019092	.	-	0	ID=GCA000144955_01946;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000144955_01946;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004516,GO:0009435;gene=pncB;Parent=GCA000144955_01946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1488,COG:H,KEGG:K00763,RefSeq:WP_000284430.1,SO:0001217,UniParc:UPI0001DD96DE,UniRef:UniRef100_UPI0001DD96DE,UniRef:UniRef50_O32090,UniRef:UniRef90_A0A3A5LU92;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	2019276	2020352	.	+	.	ID=GCA000144955_01947_gene;locus_tag=GCA000144955_01947;gene=nos
contig_1	Pyrodigal	CDS	2019276	2020352	.	+	0	ID=GCA000144955_01947;Name=Nitric oxide synthase oxygenase;locus_tag=GCA000144955_01947;product=Nitric oxide synthase oxygenase;Dbxref=GO:0004517,GO:0006809,GO:0020037,GO:0046872;gene=nos;Parent=GCA000144955_01947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4362,COG:P,RefSeq:WP_000897644.1,SO:0001217,UniParc:UPI0001DD96DF,UniRef:UniRef100_UPI0001DD96DF,UniRef:UniRef50_Q6GFE2,UniRef:UniRef90_Q6GFE2;ec_number=1.14.14.47
contig_1	Pyrodigal	gene	2020372	2021166	.	+	.	ID=GCA000144955_01948_gene;locus_tag=GCA000144955_01948;gene=pheA2
contig_1	Pyrodigal	CDS	2020372	2021166	.	+	0	ID=GCA000144955_01948;Name=prephenate dehydratase;locus_tag=GCA000144955_01948;product=prephenate dehydratase;gene=pheA2;Parent=GCA000144955_01948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0077,COG:E,RefSeq:WP_001177825.1,SO:0001217,UniParc:UPI0001DD96E0,UniRef:UniRef100_UPI0001DD96E0,UniRef:UniRef50_A0A0E7Y8C1,UniRef:UniRef90_A0A0E7Y8C1
contig_1	Pyrodigal	gene	2021346	2022908	.	-	.	ID=GCA000144955_01949_gene;locus_tag=GCA000144955_01949;gene=sdcS
contig_1	Pyrodigal	CDS	2021346	2022908	.	-	0	ID=GCA000144955_01949;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000144955_01949;product=Sodium-dependent dicarboxylate transporter SdcS;Dbxref=GO:0005886,GO:0006814,GO:0015293;gene=sdcS;Parent=GCA000144955_01949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_000262457.1,SO:0001217,UniParc:UPI0001DD96E1,UniRef:UniRef100_UPI0001DD96E1,UniRef:UniRef50_Q2FWY4,UniRef:UniRef90_Q2FWY4
contig_1	Pyrodigal	gene	2023114	2024211	.	-	.	ID=GCA000144955_01950_gene;locus_tag=GCA000144955_01950
contig_1	Pyrodigal	CDS	2023114	2024211	.	-	0	ID=GCA000144955_01950;Name=Cell wall surface anchor family protein;locus_tag=GCA000144955_01950;product=Cell wall surface anchor family protein;Parent=GCA000144955_01950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000275715.1,SO:0001217,UniParc:UPI0001DD96E2,UniRef:UniRef100_UPI0001DD96E2,UniRef:UniRef50_A0A2U0IGB7,UniRef:UniRef90_A0A2U0IGB7
contig_1	Pyrodigal	gene	2024583	2025143	.	+	.	ID=GCA000144955_01951_gene;locus_tag=GCA000144955_01951;gene=pncA
contig_1	Pyrodigal	CDS	2024583	2025143	.	+	0	ID=GCA000144955_01951;Name=Nicotinamidase;locus_tag=GCA000144955_01951;product=Nicotinamidase;gene=pncA;Parent=GCA000144955_01951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000149686.1,SO:0001217,UniParc:UPI0000054471,UniRef:UniRef100_Q2FWY2,UniRef:UniRef50_B9E842,UniRef:UniRef90_A0A077UMZ6
contig_1	Pyrodigal	gene	2025196	2026125	.	+	.	ID=GCA000144955_01952_gene;locus_tag=GCA000144955_01952;gene=ppaC
contig_1	Pyrodigal	CDS	2025196	2026125	.	+	0	ID=GCA000144955_01952;Name=manganese-dependent inorganic pyrophosphatase;locus_tag=GCA000144955_01952;product=manganese-dependent inorganic pyrophosphatase;Dbxref=GO:0004427,GO:0005737,GO:0030145;gene=ppaC;Parent=GCA000144955_01952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1227,KEGG:K15986,RefSeq:WP_001140868.1,SO:0001217,UniParc:UPI0001DD96E3,UniRef:UniRef100_UPI0001DD96E3,UniRef:UniRef50_P37487,UniRef:UniRef90_Q2FWY1;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	2026622	2028001	.	+	.	ID=GCA000144955_01953_gene;locus_tag=GCA000144955_01953;gene=aldH1
contig_1	Pyrodigal	CDS	2026622	2028001	.	+	0	ID=GCA000144955_01953;Name=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;locus_tag=GCA000144955_01953;product=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0005737,GO:0006081,GO:0016117,GO:0016620;gene=aldH1;Parent=GCA000144955_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001021221.1,SO:0001217,UniParc:UPI0001DD96E4,UniRef:UniRef100_UPI0001DD96E4,UniRef:UniRef50_Q2FWX9,UniRef:UniRef90_Q2FWX9;ec_number=1.2.1.-
contig_1	Pyrodigal	gene	2028121	2029149	.	-	.	ID=GCA000144955_01954_gene;locus_tag=GCA000144955_01954;gene=pgl
contig_1	Pyrodigal	CDS	2028121	2029149	.	-	0	ID=GCA000144955_01954;Name=putative protein SAOUHSC_02143;locus_tag=GCA000144955_01954;product=putative protein SAOUHSC_02143;Dbxref=GO:0005829,GO:0017057;gene=pgl;Parent=GCA000144955_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2706,COG:G,RefSeq:WP_000181330.1,SO:0001217,UniParc:UPI0001DD96E5,UniRef:UniRef100_UPI0001DD96E5,UniRef:UniRef50_Q2FWX8,UniRef:UniRef90_Q2FWX8
contig_1	Pyrodigal	gene	2029419	2029820	.	+	.	ID=GCA000144955_01955_gene;locus_tag=GCA000144955_01955
contig_1	Pyrodigal	CDS	2029419	2029820	.	+	0	ID=GCA000144955_01955;Name=YolD-like family protein;locus_tag=GCA000144955_01955;product=YolD-like family protein;Parent=GCA000144955_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205106.1,SO:0001217,UniParc:UPI000005446C,UniRef:UniRef100_Q2FWX7,UniRef:UniRef50_Q2FWX7,UniRef:UniRef90_Q2FWX7
contig_1	Pyrodigal	gene	2029877	2030050	.	-	.	ID=GCA000144955_01956_gene;locus_tag=GCA000144955_01956
contig_1	Pyrodigal	CDS	2029877	2030050	.	-	0	ID=GCA000144955_01956;Name=Phage protein;locus_tag=GCA000144955_01956;product=Phage protein;Parent=GCA000144955_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000267034.1,SO:0001217,UniParc:UPI000005446B,UniRef:UniRef100_Q2FWX6,UniRef:UniRef50_Q2FWX6,UniRef:UniRef90_Q2FWX6
contig_1	Pyrodigal	gene	2030429	2031541	.	+	.	ID=GCA000144955_01957_gene;locus_tag=GCA000144955_01957
contig_1	Pyrodigal	CDS	2030429	2031541	.	+	0	ID=GCA000144955_01957;Name=Peptidase C45 hydrolase domain-containing protein;locus_tag=GCA000144955_01957;product=Peptidase C45 hydrolase domain-containing protein;Parent=GCA000144955_01957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4927,COG:R,SO:0001217,UniRef:UniRef50_A0A380GLM7,UniRef:UniRef90_Q2FWX5
contig_1	Pyrodigal	gene	2031598	2032440	.	-	.	ID=GCA000144955_01958_gene;locus_tag=GCA000144955_01958
contig_1	Pyrodigal	CDS	2031598	2032440	.	-	0	ID=GCA000144955_01958;Name=DUF4097 domain-containing protein;locus_tag=GCA000144955_01958;product=DUF4097 domain-containing protein;Parent=GCA000144955_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000713067.1,SO:0001217,UniParc:UPI0001DD96E7,UniRef:UniRef100_UPI0001DD96E7,UniRef:UniRef50_Q2FWX4,UniRef:UniRef90_Q2FWX4
contig_1	Pyrodigal	gene	2032437	2032994	.	-	.	ID=GCA000144955_01959_gene;locus_tag=GCA000144955_01959
contig_1	Pyrodigal	CDS	2032437	2032994	.	-	0	ID=GCA000144955_01959;Name=DUF1700 domain-containing protein;locus_tag=GCA000144955_01959;product=DUF1700 domain-containing protein;Parent=GCA000144955_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4709,COG:S,RefSeq:WP_001033968.1,SO:0001217,UniParc:UPI00003B17FB,UniRef:UniRef100_A0A7Z7QZN4,UniRef:UniRef50_Q2FWX3,UniRef:UniRef90_Q2FWX3
contig_1	Pyrodigal	gene	2033054	2033578	.	-	.	ID=GCA000144955_01960_gene;locus_tag=GCA000144955_01960
contig_1	Pyrodigal	CDS	2033054	2033578	.	-	0	ID=GCA000144955_01960;Name=Lipoprotein;locus_tag=GCA000144955_01960;product=Lipoprotein;Parent=GCA000144955_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000966288.1,SO:0001217,UniParc:UPI0000054467,UniRef:UniRef100_Q2FWX2,UniRef:UniRef50_G5JI25,UniRef:UniRef90_Q2FWX2
contig_1	Pyrodigal	gene	2033699	2034262	.	+	.	ID=GCA000144955_01961_gene;locus_tag=GCA000144955_01961
contig_1	Pyrodigal	CDS	2033699	2034262	.	+	0	ID=GCA000144955_01961;Name=Thioredoxin family protein;locus_tag=GCA000144955_01961;product=Thioredoxin family protein;Parent=GCA000144955_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182842.1,SO:0001217,UniParc:UPI00000D769F,UniRef:UniRef100_Q2FWX1,UniRef:UniRef50_Q2FWX1,UniRef:UniRef90_Q2FWX1
contig_1	Pyrodigal	gene	2034328	2035068	.	-	.	ID=GCA000144955_01962_gene;locus_tag=GCA000144955_01962;gene=pmtD
contig_1	Pyrodigal	CDS	2034328	2035068	.	-	0	ID=GCA000144955_01962;Name=phenol-soluble modulin export ABC transporter permease subunit PmtD;locus_tag=GCA000144955_01962;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;gene=pmtD;Parent=GCA000144955_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221651,BlastRules:WP_001830379,RefSeq:WP_001221656.1,SO:0001217,UniParc:UPI00005FE675,UniRef:UniRef100_A0A2S6D5G9,UniRef:UniRef50_Q2FWX0,UniRef:UniRef90_Q2FWX0
contig_1	Pyrodigal	gene	2035068	2035940	.	-	.	ID=GCA000144955_01963_gene;locus_tag=GCA000144955_01963;gene=pmtC
contig_1	Pyrodigal	CDS	2035068	2035940	.	-	0	ID=GCA000144955_01963;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;locus_tag=GCA000144955_01963;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;gene=pmtC;Parent=GCA000144955_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000763048,BlastRules:WP_001830444,COG:COG1131,COG:JV,RefSeq:WP_000763048.1,SO:0001217,UniParc:UPI0000054464,UniRef:UniRef100_Q2FWW9,UniRef:UniRef50_S2XE79,UniRef:UniRef90_A0A390VQC9
contig_1	Pyrodigal	gene	2035937	2036617	.	-	.	ID=GCA000144955_01964_gene;locus_tag=GCA000144955_01964;gene=pmtB
contig_1	Pyrodigal	CDS	2035937	2036617	.	-	0	ID=GCA000144955_01964;Name=phenol-soluble modulin export ABC transporter permease subunit PmtB;locus_tag=GCA000144955_01964;product=phenol-soluble modulin export ABC transporter permease subunit PmtB;gene=pmtB;Parent=GCA000144955_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000645727,BlastRules:WP_002494112,RefSeq:WP_000645727.1,SO:0001217,UniParc:UPI0000054463,UniRef:UniRef100_Q2FWW8,UniRef:UniRef50_Q2FWW8,UniRef:UniRef90_Q2FWW8
contig_1	Pyrodigal	gene	2036618	2037514	.	-	.	ID=GCA000144955_01965_gene;locus_tag=GCA000144955_01965;gene=pmtA
contig_1	Pyrodigal	CDS	2036618	2037514	.	-	0	ID=GCA000144955_01965;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;locus_tag=GCA000144955_01965;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;gene=pmtA;Parent=GCA000144955_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000991302,BlastRules:WP_001830432,COG:COG1131,COG:JV,RefSeq:WP_000991298.1,SO:0001217,UniParc:UPI0001C0BD2D,UniRef:UniRef100_A0A380DUR2,UniRef:UniRef50_A0A380DUR2,UniRef:UniRef90_A0A380DUR2
contig_1	Pyrodigal	gene	2037511	2037891	.	-	.	ID=GCA000144955_01966_gene;locus_tag=GCA000144955_01966;gene=pmtR
contig_1	Pyrodigal	CDS	2037511	2037891	.	-	0	ID=GCA000144955_01966;Name=PSM export ABC transporter transcriptional regulator PmtR;locus_tag=GCA000144955_01966;product=PSM export ABC transporter transcriptional regulator PmtR;gene=pmtR;Parent=GCA000144955_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1725,COG:K,KEGG:K07979,RefSeq:WP_000691584.1,SO:0001217,UniParc:UPI00000D785D,UniRef:UniRef100_Q2FWW6,UniRef:UniRef50_Q2FWW6,UniRef:UniRef90_Q2FWW6
contig_1	Pyrodigal	gene	2038150	2038326	.	-	.	ID=GCA000144955_01967_gene;locus_tag=GCA000144955_01967
contig_1	Pyrodigal	CDS	2038150	2038326	.	-	0	ID=GCA000144955_01967;Name=SE1626 family protein;locus_tag=GCA000144955_01967;product=SE1626 family protein;Parent=GCA000144955_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000681975.1,SO:0001217,UniParc:UPI00005FE678,UniRef:UniRef100_UPI00005FE678,UniRef:UniRef50_A0A151A0Y9,UniRef:UniRef90_Q2FWW5
contig_1	Pyrodigal	gene	2038867	2040153	.	+	.	ID=GCA000144955_01968_gene;locus_tag=GCA000144955_01968;gene=aspB
contig_1	Pyrodigal	CDS	2038867	2040153	.	+	0	ID=GCA000144955_01968;Name=Aminotransferase class I/classII large domain-containing protein;locus_tag=GCA000144955_01968;product=Aminotransferase class I/classII large domain-containing protein;gene=aspB;Parent=GCA000144955_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_001068526.1,SO:0001217,UniParc:UPI0001DD9875,UniRef:UniRef100_UPI0001DD9875,UniRef:UniRef50_A0A380FXV6,UniRef:UniRef90_Q2FWW3
contig_1	Pyrodigal	gene	2040432	2040722	.	-	.	ID=GCA000144955_01969_gene;locus_tag=GCA000144955_01969
contig_1	Pyrodigal	CDS	2040432	2040722	.	-	0	ID=GCA000144955_01969;Name=MAP domain-containing protein;locus_tag=GCA000144955_01969;product=MAP domain-containing protein;Parent=GCA000144955_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014532780.1,SO:0001217,UniParc:UPI0001DD9876,UniRef:UniRef100_UPI0001DD9876,UniRef:UniRef50_Q2FWW2,UniRef:UniRef90_Q2FWW2
contig_1	Pyrodigal	gene	2040733	2042172	.	-	.	ID=GCA000144955_01970_gene;locus_tag=GCA000144955_01970;gene=eap
contig_1	Pyrodigal	CDS	2040733	2042172	.	-	0	ID=GCA000144955_01970;Name=extracellular adherence protein Eap/Map;locus_tag=GCA000144955_01970;product=extracellular adherence protein Eap/Map;gene=eap;Parent=GCA000144955_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000669709,BlastRules:WP_001623710,KEGG:K14204,RefSeq:WP_014532781.1,SO:0001217,UniParc:UPI0001DD9877,UniRef:UniRef100_UPI0001DD9877,UniRef:UniRef50_Q99QS1,UniRef:UniRef90_A0A7Z1N414
contig_1	Pyrodigal	gene	2042558	2042758	.	+	.	ID=GCA000144955_01971_gene;locus_tag=GCA000144955_01971
contig_1	Pyrodigal	CDS	2042558	2042758	.	+	0	ID=GCA000144955_01971;Name=Beta-hemolysin;locus_tag=GCA000144955_01971;product=Beta-hemolysin;Parent=GCA000144955_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D77C2,UniRef:UniRef100_A0A0H3K9G7,UniRef:UniRef50_A0A7U6XWR1,UniRef:UniRef90_A0A7U6XWR1
contig_1	Bakta	gene	2043235	2043309	.	+	.	ID=GCA000144955_01972_gene;locus_tag=GCA000144955_01972;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2043235	2043309	.	+	0	ID=GCA000144955_01972;Name=Phage protein;locus_tag=GCA000144955_01972;product=Phage protein;Parent=GCA000144955_01972_gene;Note=SO:0001217,UniParc:UPI000865C40E,UniRef:UniRef100_A0A1C9ZYE6,UniRef:UniRef50_A0A0H5BLP8,UniRef:UniRef90_A0A0H5BLP8
contig_1	Pyrodigal	gene	2043933	2044283	.	-	.	ID=GCA000144955_01973_gene;locus_tag=GCA000144955_01973;gene=scn
contig_1	Pyrodigal	CDS	2043933	2044283	.	-	0	ID=GCA000144955_01973;Name=complement inhibitor SCIN-A;locus_tag=GCA000144955_01973;product=complement inhibitor SCIN-A;Dbxref=GO:0005576;gene=scn;Parent=GCA000144955_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702263,KEGG:K14199,NCBIProtein:ADL23798.1,RefSeq:WP_000702263.1,SO:0001217,UniParc:UPI00000D7752,UniRef:UniRef100_Q2FFF8,UniRef:UniRef50_Q2FWV6,UniRef:UniRef90_Q2FWV6
contig_1	Infernal	gene	2044442	2044583	.	-	.	ID=GCA000144955_01974_gene;locus_tag=GCA000144955_01974;gene=sprD
contig_1	Infernal	ncRNA	2044442	2044583	8.1e-26	-	.	ID=GCA000144955_01974;Name=Small pathogenicity island RNA D;locus_tag=GCA000144955_01974;gene=sprD;product=Small pathogenicity island RNA D;Dbxref=RFAM:RF01828;Parent=GCA000144955_01974_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01828
contig_1	Pyrodigal	gene	2044968	2045417	.	+	.	ID=GCA000144955_01975_gene;locus_tag=GCA000144955_01975;gene=chp
contig_1	Pyrodigal	CDS	2044968	2045417	.	+	0	ID=GCA000144955_01975;Name=chemotaxis-inhibiting protein CHIPS;locus_tag=GCA000144955_01975;product=chemotaxis-inhibiting protein CHIPS;Dbxref=GO:0005576;gene=chp;Parent=GCA000144955_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727649.1,SO:0001217,UniParc:UPI00001B580C,UniRef:UniRef100_Q2FFF7,UniRef:UniRef50_Q2FWV5,UniRef:UniRef90_Q2FWV5,VFDB:VFC0258,VFDB:VFG002422
contig_1	Pyrodigal	gene	2045512	2045808	.	-	.	ID=GCA000144955_01976_gene;locus_tag=GCA000144955_01976
contig_1	Pyrodigal	CDS	2045512	2045808	.	-	0	ID=GCA000144955_01976;Name=Peptidoglycan hydrolase%2C putative;locus_tag=GCA000144955_01976;product=Peptidoglycan hydrolase%2C putative;Parent=GCA000144955_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001110822.1,SO:0001217,UniParc:UPI0000696C86,UniRef:UniRef100_Q2FWV4,UniRef:UniRef50_A0A345AR31,UniRef:UniRef90_Q2FWV4
contig_1	Infernal	gene	2046050	2046200	.	-	.	ID=GCA000144955_01977_gene;locus_tag=GCA000144955_01977;gene=sprX
contig_1	Infernal	ncRNA	2046050	2046200	1.6e-32	-	.	ID=GCA000144955_01977;Name=Small pathogenicity island RNA X;locus_tag=GCA000144955_01977;gene=sprX;product=Small pathogenicity island RNA X;Dbxref=RFAM:RF02672;Parent=GCA000144955_01977_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02672
contig_1	Pyrodigal	gene	2046497	2046988	.	-	.	ID=GCA000144955_01978_gene;locus_tag=GCA000144955_01978;gene=sak
contig_1	Pyrodigal	CDS	2046497	2046988	.	-	0	ID=GCA000144955_01978;Name=staphylokinase;locus_tag=GCA000144955_01978;product=staphylokinase;Dbxref=GO:0005576;gene=sak;Parent=GCA000144955_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000920038,NCBIProtein:CAA24957.1,RefSeq:WP_000919350.1,SO:0001217,UniParc:UPI00000B6E0F,UniRef:UniRef100_Q6GFB2,UniRef:UniRef50_P15240,UniRef:UniRef90_P15240
contig_1	Pyrodigal	gene	2047179	2047934	.	-	.	ID=GCA000144955_01979_gene;locus_tag=GCA000144955_01979
contig_1	Pyrodigal	CDS	2047179	2047934	.	-	0	ID=GCA000144955_01979;Name=Autolysin;locus_tag=GCA000144955_01979;product=Autolysin;Parent=GCA000144955_01979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000861038.1,SO:0001217,UniParc:UPI0000054453,UniRef:UniRef100_Q2FWV2,UniRef:UniRef50_A0A1W7ACD2,UniRef:UniRef90_A0A380E267
contig_1	Pyrodigal	gene	2047946	2048200	.	-	.	ID=GCA000144955_01980_gene;locus_tag=GCA000144955_01980
contig_1	Pyrodigal	CDS	2047946	2048200	.	-	0	ID=GCA000144955_01980;Name=phage holin;locus_tag=GCA000144955_01980;product=phage holin;Dbxref=GO:0140911;Parent=GCA000144955_01980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5546,COG:S,RefSeq:WP_000611512.1,SO:0001217,UniParc:UPI0000054452,UniRef:UniRef100_Q2FWV1,UniRef:UniRef50_A0A3D8ZD14,UniRef:UniRef90_A0A2X2MCQ2
contig_1	Infernal	gene	2048440	2048619	.	-	.	ID=GCA000144955_01981_gene;locus_tag=GCA000144955_01981;gene=rli28
contig_1	Infernal	ncRNA	2048440	2048619	9.1e-12	-	.	ID=GCA000144955_01981;Name=Listeria sRNA rli28;locus_tag=GCA000144955_01981;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000144955_01981_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	2048738	2048968	.	-	.	ID=GCA000144955_01982_gene;locus_tag=GCA000144955_01982
contig_1	Pyrodigal	CDS	2048738	2048968	.	-	0	ID=GCA000144955_01982;Name=DUF2951 domain-containing protein;locus_tag=GCA000144955_01982;product=DUF2951 domain-containing protein;Parent=GCA000144955_01982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7U0G7S2,UniRef:UniRef90_UPI00352AF0CC
contig_1	Pyrodigal	gene	2049092	2049379	.	-	.	ID=GCA000144955_01983_gene;locus_tag=GCA000144955_01983
contig_1	Pyrodigal	CDS	2049092	2049379	.	-	0	ID=GCA000144955_01983;Name=Phage protein;locus_tag=GCA000144955_01983;product=Phage protein;Parent=GCA000144955_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001040261.1,SO:0001217,UniParc:UPI000005444F,UniRef:UniRef100_Q2FWU7,UniRef:UniRef50_A0A0H3JMR5,UniRef:UniRef90_W5R962
contig_1	Pyrodigal	gene	2049426	2049578	.	-	.	ID=GCA000144955_01984_gene;locus_tag=GCA000144955_01984
contig_1	Pyrodigal	CDS	2049426	2049578	.	-	0	ID=GCA000144955_01984;Name=Phage protein;locus_tag=GCA000144955_01984;product=Phage protein;Parent=GCA000144955_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A345AQI6,UniRef:UniRef90_W5RAM1
contig_1	Pyrodigal	gene	2049568	2053353	.	-	.	ID=GCA000144955_01985_gene;locus_tag=GCA000144955_01985
contig_1	Pyrodigal	CDS	2049568	2053353	.	-	0	ID=GCA000144955_01985;Name=Peptidase S74 domain-containing protein;locus_tag=GCA000144955_01985;product=Peptidase S74 domain-containing protein;Parent=GCA000144955_01985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000582165.1,SO:0001217,UniParc:UPI0000696C87,UniRef:UniRef100_A0A9X9P4I3,UniRef:UniRef50_A0A2I6PDL0,UniRef:UniRef90_A0A9X9JUS9
contig_1	Pyrodigal	gene	2053369	2054853	.	-	.	ID=GCA000144955_01986_gene;locus_tag=GCA000144955_01986
contig_1	Pyrodigal	CDS	2053369	2054853	.	-	0	ID=GCA000144955_01986;Name=Phage tail protein;locus_tag=GCA000144955_01986;product=Phage tail protein;Parent=GCA000144955_01986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000567408.1,SO:0001217,UniParc:UPI00000CAF03,UniRef:UniRef100_A0A9X9JUP3,UniRef:UniRef50_C5I676,UniRef:UniRef90_C8CH31
contig_1	Pyrodigal	gene	2054850	2059361	.	-	.	ID=GCA000144955_01987_gene;locus_tag=GCA000144955_01987
contig_1	Pyrodigal	CDS	2054850	2059361	.	-	0	ID=GCA000144955_01987;Name=Phage tail tape measure protein;locus_tag=GCA000144955_01987;product=Phage tail tape measure protein;Parent=GCA000144955_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000504560.1,SO:0001217,UniParc:UPI0001DD9878,UniRef:UniRef100_UPI0001DD9878,UniRef:UniRef50_A0A0U1MQ46,UniRef:UniRef90_A0A6B0CY49
contig_1	Pyrodigal	gene	2059418	2059555	.	-	.	ID=GCA000144955_01988_gene;locus_tag=GCA000144955_01988
contig_1	Pyrodigal	CDS	2059418	2059555	.	-	0	ID=GCA000144955_01988;Name=Phage protein;locus_tag=GCA000144955_01988;product=Phage protein;Parent=GCA000144955_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH29,UniRef:UniRef90_A0A898CKY1
contig_1	Pyrodigal	gene	2059606	2059956	.	-	.	ID=GCA000144955_01989_gene;locus_tag=GCA000144955_01989;gene=gpG
contig_1	Pyrodigal	CDS	2059606	2059956	.	-	0	ID=GCA000144955_01989;Name=phage tail assembly chaperone G;locus_tag=GCA000144955_01989;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000144955_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3U503,UniRef:UniRef90_A0A0H3U503
contig_1	Pyrodigal	gene	2060272	2060916	.	-	.	ID=GCA000144955_01990_gene;locus_tag=GCA000144955_01990
contig_1	Pyrodigal	CDS	2060272	2060916	.	-	0	ID=GCA000144955_01990;Name=Phage tail protein;locus_tag=GCA000144955_01990;product=Phage tail protein;Parent=GCA000144955_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000268733.1,SO:0001217,UniParc:UPI00019F4D3C,UniRef:UniRef100_A0A1X9H0J2,UniRef:UniRef50_Q4L5J9,UniRef:UniRef90_A0A7U7JQL9
contig_1	Pyrodigal	gene	2060917	2061324	.	-	.	ID=GCA000144955_01991_gene;locus_tag=GCA000144955_01991
contig_1	Pyrodigal	CDS	2060917	2061324	.	-	0	ID=GCA000144955_01991;Name=Bacteriophage protein;locus_tag=GCA000144955_01991;product=Bacteriophage protein;Parent=GCA000144955_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4L5J8,UniRef:UniRef90_A0A2K4ANR9
contig_1	Pyrodigal	gene	2061321	2061725	.	-	.	ID=GCA000144955_01992_gene;locus_tag=GCA000144955_01992
contig_1	Pyrodigal	CDS	2061321	2061725	.	-	0	ID=GCA000144955_01992;Name=Phage protein;locus_tag=GCA000144955_01992;product=Phage protein;Parent=GCA000144955_01992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000114227.1,SO:0001217,UniParc:UPI00000CAF06,UniRef:UniRef100_A0A9X9JXL8,UniRef:UniRef50_A0A9P3ZD13,UniRef:UniRef90_A0A9P3ZD13
contig_1	Pyrodigal	gene	2061722	2062084	.	-	.	ID=GCA000144955_01993_gene;locus_tag=GCA000144955_01993
contig_1	Pyrodigal	CDS	2061722	2062084	.	-	0	ID=GCA000144955_01993;Name=Phage protein;locus_tag=GCA000144955_01993;product=Phage protein;Parent=GCA000144955_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755150.1,SO:0001217,UniParc:UPI00000CAC93,UniRef:UniRef100_A0AA44A5F5,UniRef:UniRef50_Q4L5J6,UniRef:UniRef90_A0A7U7PW63
contig_1	Pyrodigal	gene	2062068	2062352	.	-	.	ID=GCA000144955_01994_gene;locus_tag=GCA000144955_01994
contig_1	Pyrodigal	CDS	2062068	2062352	.	-	0	ID=GCA000144955_01994;Name=Phage head-tail adapter protein;locus_tag=GCA000144955_01994;product=Phage head-tail adapter protein;Parent=GCA000144955_01994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000150936.1,SO:0001217,UniParc:UPI00000CACBA,UniRef:UniRef100_A0AA43V301,UniRef:UniRef50_A0A7U7PWE4,UniRef:UniRef90_A0AA43V301
contig_1	Pyrodigal	gene	2062342	2062626	.	-	.	ID=GCA000144955_01995_gene;locus_tag=GCA000144955_01995
contig_1	Pyrodigal	CDS	2062342	2062626	.	-	0	ID=GCA000144955_01995;Name=Phage protein;locus_tag=GCA000144955_01995;product=Phage protein;Parent=GCA000144955_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000238236.1,SO:0001217,UniParc:UPI00000CAD90,UniRef:UniRef100_A0A9X9P1T4,UniRef:UniRef50_A0A0H3U504,UniRef:UniRef90_A0A6B0BAF2
contig_1	Pyrodigal	gene	2062646	2063791	.	-	.	ID=GCA000144955_01996_gene;locus_tag=GCA000144955_01996
contig_1	Pyrodigal	CDS	2062646	2063791	.	-	0	ID=GCA000144955_01996;Name=phage major capsid protein;locus_tag=GCA000144955_01996;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000144955_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154561.1,SO:0001217,UniParc:UPI0001DD9879,UniRef:UniRef100_UPI0001DD9879,UniRef:UniRef50_B9DJD8,UniRef:UniRef90_A0A5S9C4Q8
contig_1	Pyrodigal	gene	2063815	2064552	.	-	.	ID=GCA000144955_01997_gene;locus_tag=GCA000144955_01997
contig_1	Pyrodigal	CDS	2063815	2064552	.	-	0	ID=GCA000144955_01997;Name=phage major capsid protein;locus_tag=GCA000144955_01997;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000144955_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01358,RefSeq:WP_000861914.1,SO:0001217,UniParc:UPI000197AA9D,UniRef:UniRef100_A0A2X2M3D4,UniRef:UniRef50_A0A2X2M3D4,UniRef:UniRef90_A0A2X2M3D4;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	2064536	2065723	.	-	.	ID=GCA000144955_01998_gene;locus_tag=GCA000144955_01998
contig_1	Pyrodigal	CDS	2064536	2065723	.	-	0	ID=GCA000144955_01998;Name=phage portal protein;locus_tag=GCA000144955_01998;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000144955_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A9X9JZ49,UniRef:UniRef90_A0A9X9JZ49
contig_1	Pyrodigal	gene	2065739	2067400	.	-	.	ID=GCA000144955_01999_gene;locus_tag=GCA000144955_01999;gene=ymfN
contig_1	Pyrodigal	CDS	2065739	2067400	.	-	0	ID=GCA000144955_01999;Name=Terminase large subunit;locus_tag=GCA000144955_01999;product=Terminase large subunit;gene=ymfN;Parent=GCA000144955_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4626,COG:X,RefSeq:WP_000625088.1,SO:0001217,UniParc:UPI00000CADB1,UniRef:UniRef100_A0A9X9JWR2,UniRef:UniRef50_Q4L5J1,UniRef:UniRef90_A0A7U7JQH6
contig_1	Pyrodigal	gene	2067397	2067741	.	-	.	ID=GCA000144955_02000_gene;locus_tag=GCA000144955_02000
contig_1	Pyrodigal	CDS	2067397	2067741	.	-	0	ID=GCA000144955_02000;Name=Phage protein;locus_tag=GCA000144955_02000;product=Phage protein;Parent=GCA000144955_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAP7IF51,UniRef:UniRef90_UPI00090F1C5D
contig_1	Pyrodigal	gene	2067872	2068171	.	-	.	ID=GCA000144955_02001_gene;locus_tag=GCA000144955_02001
contig_1	Pyrodigal	CDS	2067872	2068171	.	-	0	ID=GCA000144955_02001;Name=HNH endonuclease;locus_tag=GCA000144955_02001;product=HNH endonuclease;Parent=GCA000144955_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAQ0S836,UniRef:UniRef90_UPI00237AD22B
contig_1	Pyrodigal	gene	2068403	2068819	.	-	.	ID=GCA000144955_02002_gene;locus_tag=GCA000144955_02002
contig_1	Pyrodigal	CDS	2068403	2068819	.	-	0	ID=GCA000144955_02002;Name=Transcriptional regulator;locus_tag=GCA000144955_02002;product=Transcriptional regulator;Parent=GCA000144955_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000590122.1,SO:0001217,UniParc:UPI00000CACDE,UniRef:UniRef100_A0AA43V3D4,UniRef:UniRef50_Q4L3V7,UniRef:UniRef90_A0A345AR05
contig_1	Pyrodigal	gene	2068847	2069050	.	-	.	ID=GCA000144955_02003_gene;locus_tag=GCA000144955_02003
contig_1	Pyrodigal	CDS	2068847	2069050	.	-	0	ID=GCA000144955_02003;Name=Phage protein;locus_tag=GCA000144955_02003;product=Phage protein;Parent=GCA000144955_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3JV18,UniRef:UniRef90_A0A0H3JV18
contig_1	Pyrodigal	gene	2069047	2069697	.	-	.	ID=GCA000144955_02004_gene;locus_tag=GCA000144955_02004
contig_1	Pyrodigal	CDS	2069047	2069697	.	-	0	ID=GCA000144955_02004;Name=Phage protein;locus_tag=GCA000144955_02004;product=Phage protein;Parent=GCA000144955_02004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A811I5S7,UniRef:UniRef90_A0A811I5S7
contig_1	Pyrodigal	gene	2069704	2069856	.	-	.	ID=GCA000144955_02005_gene;locus_tag=GCA000144955_02005
contig_1	Pyrodigal	CDS	2069704	2069856	.	-	0	ID=GCA000144955_02005;Name=hypothetical protein;locus_tag=GCA000144955_02005;product=hypothetical protein;Parent=GCA000144955_02005_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	2069856	2070005	.	-	.	ID=GCA000144955_02006_gene;locus_tag=GCA000144955_02006;gene=rinB
contig_1	Pyrodigal	CDS	2069856	2070005	.	-	0	ID=GCA000144955_02006;Name=transcriptional activator RinB;locus_tag=GCA000144955_02006;product=transcriptional activator RinB;gene=rinB;Parent=GCA000144955_02006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A653ZBR0,UniRef:UniRef90_A0AA47KWC5
contig_1	Pyrodigal	gene	2070002	2070208	.	-	.	ID=GCA000144955_02007_gene;locus_tag=GCA000144955_02007
contig_1	Pyrodigal	CDS	2070002	2070208	.	-	0	ID=GCA000144955_02007;Name=DUF1381 domain-containing protein;locus_tag=GCA000144955_02007;product=DUF1381 domain-containing protein;Parent=GCA000144955_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000195810.1,SO:0001217,UniParc:UPI0001C0BF30,UniRef:UniRef100_S4V684,UniRef:UniRef50_A9CR91,UniRef:UniRef90_S4V684
contig_1	Pyrodigal	gene	2070245	2070778	.	-	.	ID=GCA000144955_02008_gene;locus_tag=GCA000144955_02008
contig_1	Pyrodigal	CDS	2070245	2070778	.	-	0	ID=GCA000144955_02008;Name=dUTPase;locus_tag=GCA000144955_02008;product=dUTPase;Parent=GCA000144955_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001061836.1,SO:0001217,UniParc:UPI0001DD9A0F,UniRef:UniRef100_UPI0001DD9A0F,UniRef:UniRef50_A0A7U7JTE6,UniRef:UniRef90_U5U798
contig_1	Pyrodigal	gene	2070793	2070954	.	-	.	ID=GCA000144955_02009_gene;locus_tag=GCA000144955_02009
contig_1	Pyrodigal	CDS	2070793	2070954	.	-	0	ID=GCA000144955_02009;Name=Phage protein;locus_tag=GCA000144955_02009;product=Phage protein;Parent=GCA000144955_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000889683.1,SO:0001217,UniParc:UPI0001DD9A10,UniRef:UniRef100_A0A9E7MVL4,UniRef:UniRef50_M9NSV7,UniRef:UniRef90_M9NSV7
contig_1	Pyrodigal	gene	2070955	2071236	.	-	.	ID=GCA000144955_02010_gene;locus_tag=GCA000144955_02010
contig_1	Pyrodigal	CDS	2070955	2071236	.	-	0	ID=GCA000144955_02010;Name=hypothetical protein;locus_tag=GCA000144955_02010;product=hypothetical protein;Parent=GCA000144955_02010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000454994.1,SO:0001217,UniParc:UPI0000505A45,UniRef:UniRef100_A0A9E7MVP0,UniRef:UniRef50_A0A2I6PCT3,UniRef:UniRef90_A0A2I6PCT3
contig_1	Pyrodigal	gene	2071237	2071410	.	-	.	ID=GCA000144955_02011_gene;locus_tag=GCA000144955_02011
contig_1	Pyrodigal	CDS	2071237	2071410	.	-	0	ID=GCA000144955_02011;Name=Phage protein;locus_tag=GCA000144955_02011;product=Phage protein;Parent=GCA000144955_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000028424.1,SO:0001217,UniParc:UPI00000D9E24,UniRef:UniRef100_A0A977R881,UniRef:UniRef50_A0A380G7F7,UniRef:UniRef90_A0A977R881
contig_1	Pyrodigal	gene	2071400	2071651	.	-	.	ID=GCA000144955_02012_gene;locus_tag=GCA000144955_02012
contig_1	Pyrodigal	CDS	2071400	2071651	.	-	0	ID=GCA000144955_02012;Name=DUF1024 domain-containing protein;locus_tag=GCA000144955_02012;product=DUF1024 domain-containing protein;Parent=GCA000144955_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065123.1,SO:0001217,UniParc:UPI0001DD9A11,UniRef:UniRef100_UPI0001DD9A11,UniRef:UniRef50_A9CR86,UniRef:UniRef90_A9CR86
contig_1	Pyrodigal	gene	2071644	2072015	.	-	.	ID=GCA000144955_02013_gene;locus_tag=GCA000144955_02013
contig_1	Pyrodigal	CDS	2071644	2072015	.	-	0	ID=GCA000144955_02013;Name=Acetyltransferase;locus_tag=GCA000144955_02013;product=Acetyltransferase;Parent=GCA000144955_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH13,UniRef:UniRef90_A0ZS31
contig_1	Pyrodigal	gene	2072024	2072266	.	-	.	ID=GCA000144955_02014_gene;locus_tag=GCA000144955_02014
contig_1	Pyrodigal	CDS	2072024	2072266	.	-	0	ID=GCA000144955_02014;Name=Phage family protein;locus_tag=GCA000144955_02014;product=Phage family protein;Parent=GCA000144955_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000131379.1,SO:0001217,UniParc:UPI0001DD9A13,UniRef:UniRef100_A0A6B5F833,UniRef:UniRef50_M9NTB1,UniRef:UniRef90_A0A0H3U4B0
contig_1	Pyrodigal	gene	2072270	2072638	.	-	.	ID=GCA000144955_02015_gene;locus_tag=GCA000144955_02015
contig_1	Pyrodigal	CDS	2072270	2072638	.	-	0	ID=GCA000144955_02015;Name=Phage protein;locus_tag=GCA000144955_02015;product=Phage protein;Parent=GCA000144955_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000101275.1,SO:0001217,UniParc:UPI0001DD9A14,UniRef:UniRef100_A0A075M052,UniRef:UniRef50_A0A075M052,UniRef:UniRef90_A0A075M052
contig_1	Pyrodigal	gene	2072651	2073055	.	-	.	ID=GCA000144955_02016_gene;locus_tag=GCA000144955_02016;gene=rusA
contig_1	Pyrodigal	CDS	2072651	2073055	.	-	0	ID=GCA000144955_02016;Name=RusA family crossover junction endodeoxyribonuclease;locus_tag=GCA000144955_02016;product=RusA family crossover junction endodeoxyribonuclease;gene=rusA;Parent=GCA000144955_02016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000401978.1,SO:0001217,UniParc:UPI00000D9EFF,UniRef:UniRef100_A0A513ZY04,UniRef:UniRef50_A9CR74,UniRef:UniRef90_A0A513ZY04
contig_1	Pyrodigal	gene	2073064	2073282	.	-	.	ID=GCA000144955_02017_gene;locus_tag=GCA000144955_02017
contig_1	Pyrodigal	CDS	2073064	2073282	.	-	0	ID=GCA000144955_02017;Name=Phage protein;locus_tag=GCA000144955_02017;product=Phage protein;Parent=GCA000144955_02017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000338527.1,SO:0001217,UniParc:UPI00000D9F00,UniRef:UniRef100_A0A0H3K3X1,UniRef:UniRef50_A0A0H3K3X1,UniRef:UniRef90_A0A0H3K3X1
contig_1	Pyrodigal	gene	2073289	2074182	.	-	.	ID=GCA000144955_02018_gene;locus_tag=GCA000144955_02018;gene=dnaD
contig_1	Pyrodigal	CDS	2073289	2074182	.	-	0	ID=GCA000144955_02018;Name=DnaD domain-containing protein;locus_tag=GCA000144955_02018;product=DnaD domain-containing protein;gene=dnaD;Parent=GCA000144955_02018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3935,COG:L,RefSeq:WP_000148328.1,SO:0001217,UniParc:UPI00000D9F01,UniRef:UniRef100_A0A6B3J2Z1,UniRef:UniRef50_A0EWX4,UniRef:UniRef90_A0A2I6PDG7
contig_1	Pyrodigal	gene	2074212	2074682	.	-	.	ID=GCA000144955_02019_gene;locus_tag=GCA000144955_02019;gene=ssb
contig_1	Pyrodigal	CDS	2074212	2074682	.	-	0	ID=GCA000144955_02019;Name=Single-stranded DNA-binding protein;locus_tag=GCA000144955_02019;product=Single-stranded DNA-binding protein;Dbxref=GO:0003697,GO:0006260,GO:0009295;gene=ssb;Parent=GCA000144955_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000934762.1,SO:0001217,UniParc:UPI0001DD9A15,UniRef:UniRef100_UPI0001DD9A15,UniRef:UniRef50_P37455,UniRef:UniRef90_Q931K4
contig_1	Pyrodigal	gene	2074683	2075168	.	-	.	ID=GCA000144955_02020_gene;locus_tag=GCA000144955_02020;gene=phnP
contig_1	Pyrodigal	CDS	2074683	2075168	.	-	0	ID=GCA000144955_02020;Name=Metallo-beta-lactamase superfamily domain protein;locus_tag=GCA000144955_02020;product=Metallo-beta-lactamase superfamily domain protein;gene=phnP;Parent=GCA000144955_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1235,COG:P,RefSeq:WP_000123900.1,SO:0001217,UniParc:UPI00000D9F03,UniRef:UniRef100_A0A6B0AFR3,UniRef:UniRef50_A0A499SQV4,UniRef:UniRef90_S4V971
contig_1	Pyrodigal	gene	2075381	2076301	.	-	.	ID=GCA000144955_02021_gene;locus_tag=GCA000144955_02021
contig_1	Pyrodigal	CDS	2075381	2076301	.	-	0	ID=GCA000144955_02021;Name=DNA single-strand annealing proteins;locus_tag=GCA000144955_02021;product=DNA single-strand annealing proteins;Parent=GCA000144955_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07455,RefSeq:WP_000138475.1,SO:0001217,UniParc:UPI000009BBBB,UniRef:UniRef100_A0A9X9P1Q5,UniRef:UniRef50_A0A2H4JDY2,UniRef:UniRef90_A0A7U7JQQ2
contig_1	Pyrodigal	gene	2076303	2078252	.	-	.	ID=GCA000144955_02022_gene;locus_tag=GCA000144955_02022
contig_1	Pyrodigal	CDS	2076303	2078252	.	-	0	ID=GCA000144955_02022;Name=Nuclease SbcCD subunit C;locus_tag=GCA000144955_02022;product=Nuclease SbcCD subunit C;Parent=GCA000144955_02022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0U1MQA4,UniRef:UniRef90_A0A0U1MQA4
contig_1	Pyrodigal	gene	2078255	2078518	.	-	.	ID=GCA000144955_02023_gene;locus_tag=GCA000144955_02023
contig_1	Pyrodigal	CDS	2078255	2078518	.	-	0	ID=GCA000144955_02023;Name=Phage protein;locus_tag=GCA000144955_02023;product=Phage protein;Parent=GCA000144955_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001205732.1,SO:0001217,UniParc:UPI00000D7769,UniRef:UniRef100_A0A0E3TAG5,UniRef:UniRef50_O80079,UniRef:UniRef90_O80079
contig_1	Pyrodigal	gene	2078527	2078787	.	-	.	ID=GCA000144955_02024_gene;locus_tag=GCA000144955_02024
contig_1	Pyrodigal	CDS	2078527	2078787	.	-	0	ID=GCA000144955_02024;Name=DUF1108 domain-containing protein;locus_tag=GCA000144955_02024;product=DUF1108 domain-containing protein;Parent=GCA000144955_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291489.1,SO:0001217,UniParc:UPI0001C37012,UniRef:UniRef100_A0A1W6JQ03,UniRef:UniRef50_B2ZYV1,UniRef:UniRef90_B2ZYV1
contig_1	Pyrodigal	gene	2078880	2079041	.	-	.	ID=GCA000144955_02025_gene;locus_tag=GCA000144955_02025
contig_1	Pyrodigal	CDS	2078880	2079041	.	-	0	ID=GCA000144955_02025;Name=Phage protein;locus_tag=GCA000144955_02025;product=Phage protein;Parent=GCA000144955_02025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000066020.1,SO:0001217,UniParc:UPI00000544B1,UniRef:UniRef100_Q2FX29,UniRef:UniRef50_B2ZYU9,UniRef:UniRef90_B2ZYU9
contig_1	Pyrodigal	gene	2079038	2079358	.	-	.	ID=GCA000144955_02026_gene;locus_tag=GCA000144955_02026
contig_1	Pyrodigal	CDS	2079038	2079358	.	-	0	ID=GCA000144955_02026;Name=DUF771 domain-containing protein;locus_tag=GCA000144955_02026;product=DUF771 domain-containing protein;Parent=GCA000144955_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4707,COG:X,RefSeq:WP_001120197.1,SO:0001217,UniParc:UPI000005441B,UniRef:UniRef100_A0A1W6JPZ0,UniRef:UniRef50_Q4L5G9,UniRef:UniRef90_A0A075LYF5
contig_1	Pyrodigal	gene	2079417	2080049	.	+	.	ID=GCA000144955_02027_gene;locus_tag=GCA000144955_02027
contig_1	Pyrodigal	CDS	2079417	2080049	.	+	0	ID=GCA000144955_02027;Name=Phage protein;locus_tag=GCA000144955_02027;product=Phage protein;Parent=GCA000144955_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000275058.1,SO:0001217,UniParc:UPI000069AB15,UniRef:UniRef100_A0A1W6JPT7,UniRef:UniRef50_A0A2K4ANQ9,UniRef:UniRef90_W5R935
contig_1	Pyrodigal	gene	2080064	2080204	.	-	.	ID=GCA000144955_02028_gene;locus_tag=GCA000144955_02028
contig_1	Pyrodigal	CDS	2080064	2080204	.	-	0	ID=GCA000144955_02028;Name=Phage protein;locus_tag=GCA000144955_02028;product=Phage protein;Parent=GCA000144955_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000939496.1,SO:0001217,UniParc:UPI0000054419,UniRef:UniRef100_A0AA43V2U0,UniRef:UniRef50_Q4L3S9,UniRef:UniRef90_A0AA43V2U0
contig_1	Pyrodigal	gene	2080235	2080429	.	-	.	ID=GCA000144955_02029_gene;locus_tag=GCA000144955_02029
contig_1	Pyrodigal	CDS	2080235	2080429	.	-	0	ID=GCA000144955_02029;Name=Phage protein;locus_tag=GCA000144955_02029;product=Phage protein;Parent=GCA000144955_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000388066.1,SO:0001217,UniParc:UPI000197AA06,UniRef:UniRef100_A0A1X9H0A2,UniRef:UniRef50_A4ZF75,UniRef:UniRef90_A0A1X9H0A2
contig_1	Pyrodigal	gene	2080446	2081198	.	-	.	ID=GCA000144955_02030_gene;locus_tag=GCA000144955_02030;gene=kilAC
contig_1	Pyrodigal	CDS	2080446	2081198	.	-	0	ID=GCA000144955_02030;Name=Anti-repressor;locus_tag=GCA000144955_02030;product=Anti-repressor;gene=kilAC;Parent=GCA000144955_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3645,COG:X,KEGG:K07741,RefSeq:WP_001148618.1,SO:0001217,UniParc:UPI0001C37131,UniRef:UniRef100_A0A9X9P4G6,UniRef:UniRef50_A0A0C6ELE4,UniRef:UniRef90_C5I631
contig_1	Pyrodigal	gene	2081255	2081794	.	+	.	ID=GCA000144955_02031_gene;locus_tag=GCA000144955_02031
contig_1	Pyrodigal	CDS	2081255	2081794	.	+	0	ID=GCA000144955_02031;Name=Phi PVL-like protein;locus_tag=GCA000144955_02031;product=Phi PVL-like protein;Parent=GCA000144955_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000351243.1,SO:0001217,UniParc:UPI00000D76B0,UniRef:UniRef100_A0A9X9JV73,UniRef:UniRef50_A0A9X9JV73,UniRef:UniRef90_A0A9X9JV73
contig_1	Pyrodigal	gene	2081818	2082078	.	-	.	ID=GCA000144955_02032_gene;locus_tag=GCA000144955_02032
contig_1	Pyrodigal	CDS	2081818	2082078	.	-	0	ID=GCA000144955_02032;Name=Phi PVL-like protein;locus_tag=GCA000144955_02032;product=Phi PVL-like protein;Parent=GCA000144955_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435341.1,SO:0001217,UniParc:UPI00000D767D,UniRef:UniRef100_Q2FWP8,UniRef:UniRef50_O80072,UniRef:UniRef90_O80072
contig_1	Pyrodigal	gene	2082091	2082330	.	-	.	ID=GCA000144955_02033_gene;locus_tag=GCA000144955_02033
contig_1	Pyrodigal	CDS	2082091	2082330	.	-	0	ID=GCA000144955_02033;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_02033;product=HTH cro/C1-type domain-containing protein;Parent=GCA000144955_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000548578.1,SO:0001217,UniParc:UPI000197AAD6,UniRef:UniRef100_G4KNS1,UniRef:UniRef50_G4KNS1,UniRef:UniRef90_G4KNS1
contig_1	Pyrodigal	gene	2082501	2083208	.	+	.	ID=GCA000144955_02034_gene;locus_tag=GCA000144955_02034
contig_1	Pyrodigal	CDS	2082501	2083208	.	+	0	ID=GCA000144955_02034;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_02034;product=HTH cro/C1-type domain-containing protein;Parent=GCA000144955_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000094093.1,SO:0001217,UniParc:UPI000197AAD5,UniRef:UniRef100_A0A2I6PDU5,UniRef:UniRef50_A0A2I6PDU5,UniRef:UniRef90_A0A2I6PDU5
contig_1	Pyrodigal	gene	2083220	2083375	.	+	.	ID=GCA000144955_02035_gene;locus_tag=GCA000144955_02035
contig_1	Pyrodigal	CDS	2083220	2083375	.	+	0	ID=GCA000144955_02035;Name=Phage protein;locus_tag=GCA000144955_02035;product=Phage protein;Parent=GCA000144955_02035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001049399.1,SO:0001217,UniParc:UPI000197AAD4,UniRef:UniRef100_A0A2I6PDR9,UniRef:UniRef90_Q9G040
contig_1	Pyrodigal	gene	2083362	2083547	.	+	.	ID=GCA000144955_02036_gene;locus_tag=GCA000144955_02036
contig_1	Pyrodigal	CDS	2083362	2083547	.	+	0	ID=GCA000144955_02036;Name=Phage protein;locus_tag=GCA000144955_02036;product=Phage protein;Parent=GCA000144955_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001089804.1,SO:0001217,UniParc:UPI000197AAD3,UniRef:UniRef100_A0A2I6PDS4,UniRef:UniRef90_Q9G041
contig_1	Pyrodigal	gene	2083747	2083914	.	+	.	ID=GCA000144955_02037_gene;locus_tag=GCA000144955_02037
contig_1	Pyrodigal	CDS	2083747	2083914	.	+	0	ID=GCA000144955_02037;Name=Cytosolic protein;locus_tag=GCA000144955_02037;product=Cytosolic protein;Parent=GCA000144955_02037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705238.1,SO:0001217,UniParc:UPI00000544A7,UniRef:UniRef100_A4ZF71,UniRef:UniRef50_A4ZF71,UniRef:UniRef90_A4ZF71
contig_1	Pyrodigal	gene	2084054	2084284	.	+	.	ID=GCA000144955_02038_gene;locus_tag=GCA000144955_02038;gene=mazF
contig_1	Pyrodigal	CDS	2084054	2084284	.	+	0	ID=GCA000144955_02038;Name=Endoribonuclease MazF;locus_tag=GCA000144955_02038;product=Endoribonuclease MazF;gene=mazF;Parent=GCA000144955_02038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000391617.1,SO:0001217,UniParc:UPI0001DD9A17,UniRef:UniRef100_A0A1C9ZYL8,UniRef:UniRef50_A0A1C9ZYL8,UniRef:UniRef90_A0A1C9ZYL8
contig_1	Pyrodigal	gene	2084766	2085803	.	+	.	ID=GCA000144955_02039_gene;locus_tag=GCA000144955_02039
contig_1	Pyrodigal	CDS	2084766	2085803	.	+	0	ID=GCA000144955_02039;Name=Integrase;locus_tag=GCA000144955_02039;product=Integrase;Parent=GCA000144955_02039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000857198.1,SO:0001217,UniParc:UPI0001699204,UniRef:UniRef100_A0A1X9H022,UniRef:UniRef90_Q38460
contig_1	Pyrodigal	gene	2085860	2086684	.	+	.	ID=GCA000144955_02040_gene;locus_tag=GCA000144955_02040;gene=sph
contig_1	Pyrodigal	CDS	2085860	2086684	.	+	0	ID=GCA000144955_02040;Name=sphingomyelin phosphodiesterase;locus_tag=GCA000144955_02040;product=sphingomyelin phosphodiesterase;Dbxref=GO:0004767;gene=sph;Parent=GCA000144955_02040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000283440.1,SO:0001217,UniParc:UPI00000D9F09,UniRef:UniRef100_A0A1P8L6H7,UniRef:UniRef50_Q2FWP1,UniRef:UniRef90_A0A0Q0XKP0;ec_number=3.1.4.12
contig_1	Pyrodigal	gene	2086957	2087973	.	-	.	ID=GCA000144955_02041_gene;locus_tag=GCA000144955_02041;gene=lukG
contig_1	Pyrodigal	CDS	2086957	2087973	.	-	0	ID=GCA000144955_02041;Name=bi-component leukocidin LukGH subunit G;locus_tag=GCA000144955_02041;product=bi-component leukocidin LukGH subunit G;Dbxref=GO:0005576,GO:0051715;gene=lukG;Parent=GCA000144955_02041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000595324,RefSeq:WP_000595021.1,SO:0001217,UniParc:UPI0001DD9A18,UniRef:UniRef100_UPI0001DD9A18,UniRef:UniRef50_Q2FWP0,UniRef:UniRef90_Q2FWP0
contig_1	Pyrodigal	gene	2087995	2089050	.	-	.	ID=GCA000144955_02042_gene;locus_tag=GCA000144955_02042;gene=lukH
contig_1	Pyrodigal	CDS	2087995	2089050	.	-	0	ID=GCA000144955_02042;Name=bi-component leukocidin LukGH subunit H;locus_tag=GCA000144955_02042;product=bi-component leukocidin LukGH subunit H;Dbxref=GO:0005576,GO:0051715;gene=lukH;Parent=GCA000144955_02042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000791407,RefSeq:WP_000791414.1,SO:0001217,UniParc:UPI0001DD9A19,UniRef:UniRef100_UPI0001DD9A19,UniRef:UniRef50_Q2FWN9,UniRef:UniRef90_Q2FWN9
contig_1	Pyrodigal	gene	2089479	2090702	.	+	.	ID=GCA000144955_02043_gene;locus_tag=GCA000144955_02043;gene=dapE
contig_1	Pyrodigal	CDS	2089479	2090702	.	+	0	ID=GCA000144955_02043;Name=putative succinyl-diaminopimelate desuccinylase;locus_tag=GCA000144955_02043;product=putative succinyl-diaminopimelate desuccinylase;Dbxref=GO:0009014,GO:0009089,GO:0019877,GO:0046872;gene=dapE;Parent=GCA000144955_02043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_000206646.1,SO:0001217,UniParc:UPI0001DD9A1A,UniRef:UniRef100_UPI0001DD9A1A,UniRef:UniRef50_Q5HKI1,UniRef:UniRef90_Q99SN6;ec_number=3.5.1.18
contig_1	Infernal	gene	2090877	2091122	.	+	.	ID=GCA000144955_02044_gene;locus_tag=GCA000144955_02044;gene=S35
contig_1	Infernal	ncRNA	2090877	2091122	2.5e-12	+	.	ID=GCA000144955_02044;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02044;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02044_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2091144	2092451	.	+	.	ID=GCA000144955_02045_gene;locus_tag=GCA000144955_02045
contig_1	Pyrodigal	CDS	2091144	2092451	.	+	0	ID=GCA000144955_02045;Name=Na+-transporting ATP synthase;locus_tag=GCA000144955_02045;product=Na+-transporting ATP synthase;Parent=GCA000144955_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001045067.1,SO:0001217,UniParc:UPI0001DD9A1B,UniRef:UniRef100_UPI0001DD9A1B,UniRef:UniRef50_Q4L3A1,UniRef:UniRef90_A0A8G2I1H9
contig_1	Pyrodigal	gene	2092987	2094603	.	-	.	ID=GCA000144955_02046_gene;locus_tag=GCA000144955_02046;gene=groL
contig_1	Pyrodigal	CDS	2092987	2094603	.	-	0	ID=GCA000144955_02046;Name=chaperonin GroEL;locus_tag=GCA000144955_02046;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA000144955_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_000240650.1,SO:0001217,UniParc:UPI0001DD9A1C,UniRef:UniRef100_A0A2K4AJ54,UniRef:UniRef50_Q9KKF0,UniRef:UniRef90_Q08854;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	2094678	2094962	.	-	.	ID=GCA000144955_02047_gene;locus_tag=GCA000144955_02047;gene=groES
contig_1	Pyrodigal	CDS	2094678	2094962	.	-	0	ID=GCA000144955_02047;Name=co-chaperone GroES;locus_tag=GCA000144955_02047;product=co-chaperone GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000144955_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_000917290.1,SO:0001217,UniParc:UPI0001DD9A1D,UniRef:UniRef100_UPI0001DD9A1D,UniRef:UniRef50_Q2FWN3,UniRef:UniRef90_Q2FWN3
contig_1	Pyrodigal	gene	2095137	2095880	.	+	.	ID=GCA000144955_02048_gene;locus_tag=GCA000144955_02048;gene=mroQ
contig_1	Pyrodigal	CDS	2095137	2095880	.	+	0	ID=GCA000144955_02048;Name=intramembrane glutamic endopeptidase MroQ;locus_tag=GCA000144955_02048;product=intramembrane glutamic endopeptidase MroQ;Dbxref=GO:0004222,GO:0016020,GO:0071586;gene=mroQ;Parent=GCA000144955_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1266,COG:O,RefSeq:WP_000197640.1,SO:0001217,UniParc:UPI0001DD9A1E,UniRef:UniRef100_UPI0001DD9A1E,UniRef:UniRef50_A0A0H2XEK8,UniRef:UniRef90_A0A0H2XEK8;ec_number=3.4.26.-
contig_1	Pyrodigal	gene	2095905	2097092	.	-	.	ID=GCA000144955_02049_gene;locus_tag=GCA000144955_02049;gene=sdrH
contig_1	Pyrodigal	CDS	2095905	2097092	.	-	0	ID=GCA000144955_02049;Name=SdrH family protein;locus_tag=GCA000144955_02049;product=SdrH family protein;gene=sdrH;Parent=GCA000144955_02049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120322.1,SO:0001217,UniParc:UPI0001DD9A1F,UniRef:UniRef100_UPI0001DD9A1F,UniRef:UniRef50_A0A0U1MQP7,UniRef:UniRef90_A0AAW4Y4X4
contig_1	Pyrodigal	gene	2097289	2097915	.	+	.	ID=GCA000144955_02050_gene;locus_tag=GCA000144955_02050;gene=fMR2
contig_1	Pyrodigal	CDS	2097289	2097915	.	+	0	ID=GCA000144955_02050;Name=Nitroreductase domain-containing protein;locus_tag=GCA000144955_02050;product=Nitroreductase domain-containing protein;gene=fMR2;Parent=GCA000144955_02050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3560,COG:R,KEGG:K07078,RefSeq:WP_000522384.1,SO:0001217,UniParc:UPI000005423C,UniRef:UniRef100_Q2FWN0,UniRef:UniRef50_Q2FWN0,UniRef:UniRef90_Q2FWN0
contig_1	Bakta	gene	2098086	2098154	.	-	.	ID=GCA000144955_02051_gene;locus_tag=GCA000144955_02051;inference=ab initio prediction:Bakta;gene=nifR
contig_1	Bakta	CDS	2098086	2098154	.	-	0	ID=GCA000144955_02051;Name=Nitrogen fixation protein NifR;locus_tag=GCA000144955_02051;product=Nitrogen fixation protein NifR;gene=nifR;Parent=GCA000144955_02051_gene;Note=SO:0001217,UniParc:UPI0004F35BC7,UniRef:UniRef100_A0A7Z1SA60,UniRef:UniRef50_A0A7Z1SA60,UniRef:UniRef90_A0A7Z1SA60
contig_1	Pyrodigal	gene	2098278	2099063	.	+	.	ID=GCA000144955_02052_gene;locus_tag=GCA000144955_02052;gene=yafV
contig_1	Pyrodigal	CDS	2098278	2099063	.	+	0	ID=GCA000144955_02052;Name=Hydrolase in agr operon;locus_tag=GCA000144955_02052;product=Hydrolase in agr operon;Dbxref=GO:0016787;gene=yafV;Parent=GCA000144955_02052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0388,COG:V,SO:0001217,UniRef:UniRef50_P0DP65,UniRef:UniRef90_P0DP65;ec_number=3.5.-.-
contig_1	Infernal	gene	2099314	2099827	.	-	.	ID=GCA000144955_02053_gene;locus_tag=GCA000144955_02053;gene=RNAIII
contig_1	Infernal	ncRNA	2099314	2099827	8.3e-57	-	.	ID=GCA000144955_02053;Name=RNAIII;locus_tag=GCA000144955_02053;product=RNAIII;Dbxref=RFAM:RF00503;Parent=GCA000144955_02053_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00503
contig_1	Pyrodigal	gene	2099663	2099797	.	-	.	ID=GCA000144955_02054_gene;locus_tag=GCA000144955_02054;gene=hld
contig_1	Pyrodigal	CDS	2099663	2099797	.	-	0	ID=GCA000144955_02054;Name=delta-hemolysin;locus_tag=GCA000144955_02054;product=delta-hemolysin;Dbxref=GO:0005576,GO:0016020,GO:0019836,GO:0020002,GO:0090729;gene=hld;Parent=GCA000144955_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11039,NCBIProtein:AGU62139.1,RefSeq:WP_001549197.1,SO:0001217,UniParc:UPI0000000A3A,UniRef:UniRef100_Q2FWM8,UniRef:UniRef50_Q2FWM8,UniRef:UniRef90_Q2FWM8,VFDB:VFC0235,VFDB:VFG001292
contig_1	Pyrodigal	gene	2099979	2100596	.	+	.	ID=GCA000144955_02055_gene;locus_tag=GCA000144955_02055;gene=agrB
contig_1	Pyrodigal	CDS	2099979	2100596	.	+	0	ID=GCA000144955_02055;Name=Accessory gene regulator protein B;locus_tag=GCA000144955_02055;product=Accessory gene regulator protein B;Dbxref=GO:0005886,GO:0006508,GO:0008233,GO:0009372;gene=agrB;Parent=GCA000144955_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07813,SO:0001217,UniRef:UniRef50_Q8NVK5,UniRef:UniRef90_Q8NVK5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	2100600	2100740	.	+	.	ID=GCA000144955_02056_gene;locus_tag=GCA000144955_02056;gene=agrD
contig_1	Pyrodigal	CDS	2100600	2100740	.	+	0	ID=GCA000144955_02056;Name=AgrD protein;locus_tag=GCA000144955_02056;product=AgrD protein;gene=agrD;Parent=GCA000144955_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735197.1,SO:0001217,UniParc:UPI00000D7832,UniRef:UniRef100_A0A7Z7R0F5,UniRef:UniRef50_A0A7H9SJ06,UniRef:UniRef90_A0A7Z7R0F5
contig_1	Pyrodigal	gene	2100765	2102057	.	+	.	ID=GCA000144955_02057_gene;locus_tag=GCA000144955_02057;gene=agrC
contig_1	Pyrodigal	CDS	2100765	2102057	.	+	0	ID=GCA000144955_02057;Name=quorum-sensing sensor histidine kinase AgrC;locus_tag=GCA000144955_02057;product=quorum-sensing sensor histidine kinase AgrC;gene=agrC;Parent=GCA000144955_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000387806.1,SO:0001217,UniParc:UPI0000662BF5,UniRef:UniRef100_Q2VFU2,UniRef:UniRef50_Q2FWM5,UniRef:UniRef90_A0A0E1X8R2;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2102076	2102792	.	+	.	ID=GCA000144955_02058_gene;locus_tag=GCA000144955_02058;gene=agrA
contig_1	Pyrodigal	CDS	2102076	2102792	.	+	0	ID=GCA000144955_02058;Name=quorum-sensing response regulator AgrA;locus_tag=GCA000144955_02058;product=quorum-sensing response regulator AgrA;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=agrA;Parent=GCA000144955_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,KEGG:K07707,RefSeq:WP_000688492.1,SO:0001217,UniParc:UPI0000054244,UniRef:UniRef100_Q5HEG2,UniRef:UniRef50_Q5HMY2,UniRef:UniRef90_Q5HEG2
contig_1	Pyrodigal	gene	2103158	2104117	.	-	.	ID=GCA000144955_02059_gene;locus_tag=GCA000144955_02059;gene=rbsK
contig_1	Pyrodigal	CDS	2103158	2104117	.	-	0	ID=GCA000144955_02059;Name=Carbohydrate kinase;locus_tag=GCA000144955_02059;product=Carbohydrate kinase;gene=rbsK;Parent=GCA000144955_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,SO:0001217,UniRef:UniRef50_A0A0Y9VKF8,UniRef:UniRef90_A0A0Y9VKF8
contig_1	Pyrodigal	gene	2104114	2105598	.	-	.	ID=GCA000144955_02060_gene;locus_tag=GCA000144955_02060;gene=sacC
contig_1	Pyrodigal	CDS	2104114	2105598	.	-	0	ID=GCA000144955_02060;Name=Sucrose-6-phosphate hydrolase;locus_tag=GCA000144955_02060;product=Sucrose-6-phosphate hydrolase;gene=sacC;Parent=GCA000144955_02060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1621,COG:G,RefSeq:WP_000141420.1,SO:0001217,UniParc:UPI0001DD9A22,UniRef:UniRef100_A0AA40JNI4,UniRef:UniRef50_Q05936,UniRef:UniRef90_A0A0H2WWU4
contig_1	Pyrodigal	gene	2105748	2106698	.	-	.	ID=GCA000144955_02061_gene;locus_tag=GCA000144955_02061;gene=purR
contig_1	Pyrodigal	CDS	2105748	2106698	.	-	0	ID=GCA000144955_02061;Name=Sucrose operon repressor%2C putative;locus_tag=GCA000144955_02061;product=Sucrose operon repressor%2C putative;gene=purR;Parent=GCA000144955_02061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000790328.1,SO:0001217,UniParc:UPI0001DD9A23,UniRef:UniRef100_UPI0001DD9A23,UniRef:UniRef50_P74892,UniRef:UniRef90_Q2FWM0
contig_1	Pyrodigal	gene	2106881	2108131	.	-	.	ID=GCA000144955_02062_gene;locus_tag=GCA000144955_02062;gene=amtB
contig_1	Pyrodigal	CDS	2106881	2108131	.	-	0	ID=GCA000144955_02062;Name=Ammonium transporter;locus_tag=GCA000144955_02062;product=Ammonium transporter;gene=amtB;Parent=GCA000144955_02062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0004,COG:P,KEGG:K03320,RefSeq:WP_001052266.1,SO:0001217,UniParc:UPI0001DD9BB3,UniRef:UniRef100_UPI0001DD9BB3,UniRef:UniRef50_A0A0D0SEH5,UniRef:UniRef90_A0A113YTI9
contig_1	Pyrodigal	gene	2108339	2108563	.	-	.	ID=GCA000144955_02063_gene;locus_tag=GCA000144955_02063;gene=tusA
contig_1	Pyrodigal	CDS	2108339	2108563	.	-	0	ID=GCA000144955_02063;Name=UPF0033 domain-containing protein;locus_tag=GCA000144955_02063;product=UPF0033 domain-containing protein;gene=tusA;Parent=GCA000144955_02063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_000581074.1,SO:0001217,UniParc:UPI0001DD9BB4,UniRef:UniRef100_A0A0D1JSK5,UniRef:UniRef50_A0A7U7JQM0,UniRef:UniRef90_A0A7U7JQM0
contig_1	Pyrodigal	gene	2108623	2109702	.	-	.	ID=GCA000144955_02064_gene;locus_tag=GCA000144955_02064;gene=yedE
contig_1	Pyrodigal	CDS	2108623	2109702	.	-	0	ID=GCA000144955_02064;Name=YeeE/YedE family protein;locus_tag=GCA000144955_02064;product=YeeE/YedE family protein;gene=yedE;Parent=GCA000144955_02064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2391,COG:R,KEGG:K07112,RefSeq:WP_000266894.1,SO:0001217,UniParc:UPI0001DD9BB5,UniRef:UniRef100_UPI0001DD9BB5,UniRef:UniRef50_A0A7U7JQE1,UniRef:UniRef90_A0A9P2Z014
contig_1	Pyrodigal	gene	2110007	2110642	.	-	.	ID=GCA000144955_02065_gene;locus_tag=GCA000144955_02065;gene=rex
contig_1	Pyrodigal	CDS	2110007	2110642	.	-	0	ID=GCA000144955_02065;Name=redox-sensing transcriptional repressor Rex;locus_tag=GCA000144955_02065;product=redox-sensing transcriptional repressor Rex;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0045892,GO:0051775;gene=rex;Parent=GCA000144955_02065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2344,COG:K,KEGG:K01926,RefSeq:WP_001283612.1,SO:0001217,UniParc:UPI000005424D,UniRef:UniRef100_Q2FWL6,UniRef:UniRef50_Q2FWL6,UniRef:UniRef90_Q2FWL6
contig_1	Pyrodigal	gene	2110895	2112823	.	+	.	ID=GCA000144955_02066_gene;locus_tag=GCA000144955_02066;gene=abc-f
contig_1	Pyrodigal	CDS	2110895	2112823	.	+	0	ID=GCA000144955_02066;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000144955_02066;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000144955_02066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000602078.1,SO:0001217,UniParc:UPI0001DD9BB6,UniRef:UniRef100_UPI0001DD9BB6,UniRef:UniRef50_A0A131I335,UniRef:UniRef90_A0A131I335
contig_1	Pyrodigal	gene	2113185	2114795	.	+	.	ID=GCA000144955_02067_gene;locus_tag=GCA000144955_02067;gene=mutS
contig_1	Pyrodigal	CDS	2113185	2114795	.	+	0	ID=GCA000144955_02067;Name=MutS domain V protein;locus_tag=GCA000144955_02067;product=MutS domain V protein;gene=mutS;Parent=GCA000144955_02067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000106326.1,SO:0001217,UniParc:UPI0001DD9BB7,UniRef:UniRef100_UPI0001DD9BB7,UniRef:UniRef50_G5JKS6,UniRef:UniRef90_Q2FWL3
contig_1	Infernal	gene	2114814	2115080	.	-	.	ID=GCA000144955_02068_gene;locus_tag=GCA000144955_02068;gene=S35
contig_1	Infernal	ncRNA	2114814	2115080	3.1e-26	-	.	ID=GCA000144955_02068;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02068;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02068_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2115162	2116187	.	-	.	ID=GCA000144955_02069_gene;locus_tag=GCA000144955_02069;gene=tsaD
contig_1	Pyrodigal	CDS	2115162	2116187	.	-	0	ID=GCA000144955_02069;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000144955_02069;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000144955_02069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_000159048.1,SO:0001217,UniParc:UPI0001DD9BB8,UniRef:UniRef100_A0A380DVI1,UniRef:UniRef50_Q2FWL2,UniRef:UniRef90_Q2FWL2;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2116180	2116644	.	-	.	ID=GCA000144955_02070_gene;locus_tag=GCA000144955_02070;gene=rimI
contig_1	Pyrodigal	CDS	2116180	2116644	.	-	0	ID=GCA000144955_02070;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000144955_02070;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0008999,GO:0036211,GO:0042254;gene=rimI;Parent=GCA000144955_02070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000372757.1,SO:0001217,UniParc:UPI0001DD9BB9,UniRef:UniRef100_UPI0001DD9BB9,UniRef:UniRef50_A0A855GHV1,UniRef:UniRef90_A0A7U7PW89;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	2116617	2117279	.	-	.	ID=GCA000144955_02071_gene;locus_tag=GCA000144955_02071;gene=tsaB
contig_1	Pyrodigal	CDS	2116617	2117279	.	-	0	ID=GCA000144955_02071;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000144955_02071;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949;gene=tsaB;Parent=GCA000144955_02071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_001086748.1,SO:0001217,UniParc:UPI0001DD9BBA,UniRef:UniRef100_UPI0001DD9BBA,UniRef:UniRef50_A0AAE2ZX37,UniRef:UniRef90_A0AAE2ZX37;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2117260	2117754	.	-	.	ID=GCA000144955_02072_gene;locus_tag=GCA000144955_02072;gene=tsaE
contig_1	Pyrodigal	CDS	2117260	2117754	.	-	0	ID=GCA000144955_02072;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000144955_02072;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949;gene=tsaE;Parent=GCA000144955_02072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,SO:0001217,UniParc:UPI00006E3004,UniRef:UniRef100_A0A0D1JSJ2,UniRef:UniRef50_A0A0D1JSJ2,UniRef:UniRef90_A0A0D1JSJ2
contig_1	Infernal	gene	2117923	2118127	.	+	.	ID=GCA000144955_02073_gene;locus_tag=GCA000144955_02073;gene=rli60
contig_1	Infernal	ncRNA	2117923	2118127	1.3e-17	+	.	ID=GCA000144955_02073;Name=Listeria sRNA rli60;locus_tag=GCA000144955_02073;product=Listeria sRNA rli60;Dbxref=RFAM:RF02414;Parent=GCA000144955_02073_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02414
contig_1	Pyrodigal	gene	2118232	2119920	.	+	.	ID=GCA000144955_02074_gene;locus_tag=GCA000144955_02074;gene=ilvD
contig_1	Pyrodigal	CDS	2118232	2119920	.	+	0	ID=GCA000144955_02074;Name=dihydroxy-acid dehydratase;locus_tag=GCA000144955_02074;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0051536,GO:0051537;gene=ilvD;Parent=GCA000144955_02074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_001255780.1,SO:0001217,UniParc:UPI0000054255,UniRef:UniRef100_Q2FWK7,UniRef:UniRef50_Q2FWK7,UniRef:UniRef90_Q2FWK7;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	2119948	2121717	.	+	.	ID=GCA000144955_02075_gene;locus_tag=GCA000144955_02075;gene=ilvB
contig_1	Pyrodigal	CDS	2119948	2121717	.	+	0	ID=GCA000144955_02075;Name=biosynthetic-type acetolactate synthase large subunit;locus_tag=GCA000144955_02075;product=biosynthetic-type acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003984,GO:0009082,GO:0030976,GO:0050660;gene=ilvB;Parent=GCA000144955_02075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_000047824.1,SO:0001217,UniParc:UPI0001DD9BBB,UniRef:UniRef100_UPI0001DD9BBB,UniRef:UniRef50_Q02137,UniRef:UniRef90_A0A0E1XAU7;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2121717	2121971	.	+	.	ID=GCA000144955_02076_gene;locus_tag=GCA000144955_02076;gene=ilvH
contig_1	Pyrodigal	CDS	2121717	2121971	.	+	0	ID=GCA000144955_02076;Name=ACT domain-containing protein;locus_tag=GCA000144955_02076;product=ACT domain-containing protein;gene=ilvH;Parent=GCA000144955_02076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0440,COG:E,KEGG:K01653,RefSeq:WP_000196910.1,SO:0001217,UniParc:UPI0001DD9BBC,UniRef:UniRef100_A0A0D1HLF8,UniRef:UniRef50_A0A7Z8E1T8,UniRef:UniRef90_Q2FWK5;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2122108	2123112	.	+	.	ID=GCA000144955_02077_gene;locus_tag=GCA000144955_02077;gene=ilvC
contig_1	Pyrodigal	CDS	2122108	2123112	.	+	0	ID=GCA000144955_02077;Name=ketol-acid reductoisomerase;locus_tag=GCA000144955_02077;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009097,GO:0009099,GO:0050661;gene=ilvC;Parent=GCA000144955_02077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0059,COG:EH,KEGG:K00053,RefSeq:WP_000214552.1,SO:0001217,UniParc:UPI00000D7826,UniRef:UniRef100_P65151,UniRef:UniRef50_Q58938,UniRef:UniRef90_Q2FWK4;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	2123142	2124671	.	+	.	ID=GCA000144955_02078_gene;locus_tag=GCA000144955_02078
contig_1	Pyrodigal	CDS	2123142	2124671	.	+	0	ID=GCA000144955_02078;Name=2-isopropylmalate synthase;locus_tag=GCA000144955_02078;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0009098;Parent=GCA000144955_02078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01649,RefSeq:WP_000094571.1,SO:0001217,UniParc:UPI0001DD9BBD,UniRef:UniRef100_UPI0001DD9BBD,UniRef:UniRef50_P94565,UniRef:UniRef90_UPI0001DD9BBD;ec_number=2.3.3.13
contig_1	Pyrodigal	gene	2124674	2125720	.	+	.	ID=GCA000144955_02079_gene;locus_tag=GCA000144955_02079;gene=leuB
contig_1	Pyrodigal	CDS	2124674	2125720	.	+	0	ID=GCA000144955_02079;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000144955_02079;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0000287,GO:0003862,GO:0005829,GO:0009098,GO:0051287;gene=leuB;Parent=GCA000144955_02079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG0473,KEGG:K00052,RefSeq:WP_000221933.1,SO:0001217,UniParc:UPI0001DD9BBE,UniRef:UniRef100_UPI0001DD9BBE,UniRef:UniRef50_P12010,UniRef:UniRef90_Q2FWK2;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	2125734	2127104	.	+	.	ID=GCA000144955_02080_gene;locus_tag=GCA000144955_02080;gene=leuC
contig_1	Pyrodigal	CDS	2125734	2127104	.	+	0	ID=GCA000144955_02080;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000144955_02080;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000144955_02080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0065,COG:E,KEGG:K01703,RefSeq:WP_000531823.1,SO:0001217,UniParc:UPI000005425B,UniRef:UniRef100_Q2FWK1,UniRef:UniRef50_P80858,UniRef:UniRef90_Q2FWK1;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2127105	2127677	.	+	.	ID=GCA000144955_02081_gene;locus_tag=GCA000144955_02081;gene=leuD
contig_1	Pyrodigal	CDS	2127105	2127677	.	+	0	ID=GCA000144955_02081;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000144955_02081;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000144955_02081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0066,COG:E,RefSeq:WP_000718948.1,SO:0001217,UniParc:UPI000012E59D,UniRef:UniRef100_Q8NVI9,UniRef:UniRef50_Q8Y5R6,UniRef:UniRef90_Q2FWK0;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2127692	2128960	.	+	.	ID=GCA000144955_02082_gene;locus_tag=GCA000144955_02082;gene=ilvA
contig_1	Pyrodigal	CDS	2127692	2128960	.	+	0	ID=GCA000144955_02082;Name=threonine ammonia-lyase IlvA;locus_tag=GCA000144955_02082;product=threonine ammonia-lyase IlvA;Dbxref=GO:0003941,GO:0004794,GO:0006520,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000144955_02082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000216848.1,SO:0001217,UniParc:UPI0001DD9BBF,UniRef:UniRef100_UPI0001DD9BBF,UniRef:UniRef50_P37946,UniRef:UniRef90_Q2FWJ9;ec_number=4.3.1.19
contig_1	Infernal	gene	2129691	2129805	.	-	.	ID=GCA000144955_02083_gene;locus_tag=GCA000144955_02083;gene=rrf
contig_1	Infernal	rRNA	2129691	2129805	1.1e-14	-	.	ID=GCA000144955_02083;Name=5S ribosomal RNA;locus_tag=GCA000144955_02083;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_02083_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2129879	2132801	.	-	.	ID=GCA000144955_02084_gene;locus_tag=GCA000144955_02084;gene=rrl
contig_1	Infernal	rRNA	2129879	2132801	1.4e-06	-	.	ID=GCA000144955_02084;Name=23S ribosomal RNA;locus_tag=GCA000144955_02084;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_02084_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2133350	2134901	.	-	.	ID=GCA000144955_02085_gene;locus_tag=GCA000144955_02085;gene=rrs
contig_1	Infernal	rRNA	2133350	2134901	1.5e-49	-	.	ID=GCA000144955_02085;Name=16S ribosomal RNA;locus_tag=GCA000144955_02085;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_02085_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	2135020	2135093	.	-	.	ID=GCA000144955_02086_gene;locus_tag=GCA000144955_02086;gene=trnG
contig_1	tRNAscan-SE	tRNA	2135020	2135093	.	-	.	ID=GCA000144955_02086;Name=tRNA-Gly(tcc);locus_tag=GCA000144955_02086;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000144955_02086_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2135115	2135197	.	-	.	ID=GCA000144955_02087_gene;locus_tag=GCA000144955_02087;gene=trnL
contig_1	tRNAscan-SE	tRNA	2135115	2135197	.	-	.	ID=GCA000144955_02087;Name=tRNA-Leu(gag);locus_tag=GCA000144955_02087;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000144955_02087_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	2135843	2136298	.	-	.	ID=GCA000144955_02088_gene;locus_tag=GCA000144955_02088;gene=sprT
contig_1	Pyrodigal	CDS	2135843	2136298	.	-	0	ID=GCA000144955_02088;Name=SprT family protein;locus_tag=GCA000144955_02088;product=SprT family protein;Dbxref=GO:0005737,GO:0008270,GO:0033554;gene=sprT;Parent=GCA000144955_02088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,RefSeq:WP_001058112.1,SO:0001217,UniParc:UPI0001DD9BC0,UniRef:UniRef100_UPI0001DD9BC0,UniRef:UniRef50_Q8Y8K2,UniRef:UniRef90_Q2FWJ6
contig_1	Pyrodigal	gene	2136291	2138429	.	-	.	ID=GCA000144955_02089_gene;locus_tag=GCA000144955_02089;gene=tex
contig_1	Pyrodigal	CDS	2136291	2138429	.	-	0	ID=GCA000144955_02089;Name=S1 motif domain-containing protein;locus_tag=GCA000144955_02089;product=S1 motif domain-containing protein;gene=tex;Parent=GCA000144955_02089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,SO:0001217,UniRef:UniRef50_A0A1M6SVE8,UniRef:UniRef90_A0A0H3JYF6
contig_1	Pyrodigal	gene	2138875	2139645	.	-	.	ID=GCA000144955_02090_gene;locus_tag=GCA000144955_02090;gene=sigB
contig_1	Pyrodigal	CDS	2138875	2139645	.	-	0	ID=GCA000144955_02090;Name=RNA polymerase sigma factor SigB;locus_tag=GCA000144955_02090;product=RNA polymerase sigma factor SigB;Dbxref=GO:0003700,GO:0006352,GO:0016987;gene=sigB;Parent=GCA000144955_02090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1191,COG:K,KEGG:K03090,RefSeq:WP_001041107.1,SO:0001217,UniParc:UPI00003B1844,UniRef:UniRef100_A0A7Z7R074,UniRef:UniRef50_P06574,UniRef:UniRef90_A0A390QYZ6
contig_1	Pyrodigal	gene	2139620	2140099	.	-	.	ID=GCA000144955_02091_gene;locus_tag=GCA000144955_02091;gene=rsbW
contig_1	Pyrodigal	CDS	2139620	2140099	.	-	0	ID=GCA000144955_02091;Name=anti-sigma B factor RsbW;locus_tag=GCA000144955_02091;product=anti-sigma B factor RsbW;Dbxref=GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0006468,GO:0016989,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045892,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=rsbW;Parent=GCA000144955_02091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2172,COG:T,RefSeq:WP_001190825.1,SO:0001217,UniParc:UPI00003B1845,UniRef:UniRef100_Q6GF08,UniRef:UniRef50_P17904,UniRef:UniRef90_Q2FWJ3;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	2140101	2140427	.	-	.	ID=GCA000144955_02092_gene;locus_tag=GCA000144955_02092;gene=rsbV
contig_1	Pyrodigal	CDS	2140101	2140427	.	-	0	ID=GCA000144955_02092;Name=Anti-sigma-B factor antagonist;locus_tag=GCA000144955_02092;product=Anti-sigma-B factor antagonist;Dbxref=GO:0043856;gene=rsbV;Parent=GCA000144955_02092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5815,COG:DT,RefSeq:WP_001052491.1,SO:0001217,UniParc:UPI00000545BE,UniRef:UniRef100_P60070,UniRef:UniRef50_P60070,UniRef:UniRef90_P60070
contig_1	Pyrodigal	gene	2140546	2141547	.	-	.	ID=GCA000144955_02093_gene;locus_tag=GCA000144955_02093;gene=rsbU
contig_1	Pyrodigal	CDS	2140546	2141547	.	-	0	ID=GCA000144955_02093;Name=RsbU;locus_tag=GCA000144955_02093;product=RsbU;gene=rsbU;Parent=GCA000144955_02093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2208,COG:TK,RefSeq:WP_000390829.1,SO:0001217,UniParc:UPI00000D76B3,UniRef:UniRef100_A0A7Z7R0V7,UniRef:UniRef50_S2XRQ7,UniRef:UniRef90_A0A2K4AFK3
contig_1	Pyrodigal	gene	2141897	2142259	.	-	.	ID=GCA000144955_02094_gene;locus_tag=GCA000144955_02094;gene=mazF
contig_1	Pyrodigal	CDS	2141897	2142259	.	-	0	ID=GCA000144955_02094;Name=Endoribonuclease MazF;locus_tag=GCA000144955_02094;product=Endoribonuclease MazF;Dbxref=GO:0003677,GO:0003723,GO:0004521,GO:0006402,GO:0016075;gene=mazF;Parent=GCA000144955_02094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2337,COG:V,RefSeq:WP_000621175.1,SO:0001217,UniParc:UPI00000545C1,UniRef:UniRef100_Q2FWI8,UniRef:UniRef50_Q2FWI8,UniRef:UniRef90_Q2FWI8;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2142256	2142426	.	-	.	ID=GCA000144955_02095_gene;locus_tag=GCA000144955_02095;gene=mazE
contig_1	Pyrodigal	CDS	2142256	2142426	.	-	0	ID=GCA000144955_02095;Name=type II toxin-antitoxin system antitoxin MazE;locus_tag=GCA000144955_02095;product=type II toxin-antitoxin system antitoxin MazE;Dbxref=GO:0006355;gene=mazE;Parent=GCA000144955_02095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000948331,BlastRules:WP_001829931,BlastRules:WP_011275271,BlastRules:WP_011302702,RefSeq:WP_000948331.1,SO:0001217,UniParc:UPI00000D780C,UniRef:UniRef100_Q2FWI7,UniRef:UniRef50_Q2FWI7,UniRef:UniRef90_Q2FWI7
contig_1	Pyrodigal	gene	2142511	2143659	.	-	.	ID=GCA000144955_02096_gene;locus_tag=GCA000144955_02096;gene=alr
contig_1	Pyrodigal	CDS	2142511	2143659	.	-	0	ID=GCA000144955_02096;Name=alanine racemase;locus_tag=GCA000144955_02096;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000144955_02096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_001281148.1,SO:0001217,UniParc:UPI0001DD9BC2,UniRef:UniRef100_UPI0001DD9BC2,UniRef:UniRef50_P63479,UniRef:UniRef90_P63479;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	2143725	2144084	.	-	.	ID=GCA000144955_02097_gene;locus_tag=GCA000144955_02097;gene=acpS
contig_1	Pyrodigal	CDS	2143725	2144084	.	-	0	ID=GCA000144955_02097;Name=Holo-[acyl-carrier-protein] synthase;locus_tag=GCA000144955_02097;product=Holo-[acyl-carrier-protein] synthase;Dbxref=GO:0000287,GO:0005737,GO:0006633,GO:0008897;gene=acpS;Parent=GCA000144955_02097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0736,COG:I,RefSeq:WP_000581196.1,SO:0001217,UniParc:UPI0001DD9BC3,UniRef:UniRef100_UPI0001DD9BC3,UniRef:UniRef50_Q9ZAH6,UniRef:UniRef90_Q9ZAH6;ec_number=2.7.8.7
contig_1	Pyrodigal	gene	2144088	2144582	.	-	.	ID=GCA000144955_02098_gene;locus_tag=GCA000144955_02098;gene=ydbS
contig_1	Pyrodigal	CDS	2144088	2144582	.	-	0	ID=GCA000144955_02098;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000144955_02098;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000144955_02098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,SO:0001217,UniRef:UniRef50_Q2FWI4,UniRef:UniRef90_Q2FWI4
contig_1	Pyrodigal	gene	2144566	2146149	.	-	.	ID=GCA000144955_02099_gene;locus_tag=GCA000144955_02099;gene=ydbT
contig_1	Pyrodigal	CDS	2144566	2146149	.	-	0	ID=GCA000144955_02099;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000144955_02099;product=YdbS-like PH domain-containing protein;gene=ydbT;Parent=GCA000144955_02099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3428,COG:S,KEGG:K08981,RefSeq:WP_001294649.1,SO:0001217,UniParc:UPI0001DD9BC5,UniRef:UniRef100_UPI0001DD9BC5,UniRef:UniRef50_A0A2K4AEP0,UniRef:UniRef90_Q2FWI3
contig_1	Pyrodigal	gene	2146142	2146621	.	-	.	ID=GCA000144955_02100_gene;locus_tag=GCA000144955_02100;gene=ydbS
contig_1	Pyrodigal	CDS	2146142	2146621	.	-	0	ID=GCA000144955_02100;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000144955_02100;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000144955_02100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,RefSeq:WP_000118169.1,SO:0001217,UniParc:UPI0001DD9BC6,UniRef:UniRef100_UPI0001DD9BC6,UniRef:UniRef50_Q2FWI2,UniRef:UniRef90_Q2FWI2
contig_1	Pyrodigal	gene	2146830	2147390	.	-	.	ID=GCA000144955_02101_gene;locus_tag=GCA000144955_02101;gene=kdpC
contig_1	Pyrodigal	CDS	2146830	2147390	.	-	0	ID=GCA000144955_02101;Name=K(+)-transporting ATPase subunit C;locus_tag=GCA000144955_02101;product=K(+)-transporting ATPase subunit C;Dbxref=GO:0005524,GO:0005886,GO:0008556,GO:0071805;gene=kdpC;Parent=GCA000144955_02101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2156,COG:P,RefSeq:WP_001092416.1,SO:0001217,UniParc:UPI0001DD9BC7,UniRef:UniRef100_A0AAN2D7A3,UniRef:UniRef50_Q2FWI1,UniRef:UniRef90_Q2FWI1
contig_1	Pyrodigal	gene	2147410	2149437	.	-	.	ID=GCA000144955_02102_gene;locus_tag=GCA000144955_02102;gene=kdpB
contig_1	Pyrodigal	CDS	2147410	2149437	.	-	0	ID=GCA000144955_02102;Name=potassium-transporting ATPase subunit KdpB;locus_tag=GCA000144955_02102;product=potassium-transporting ATPase subunit KdpB;Dbxref=GO:0000287,GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0016020,GO:0016887,GO:0031004;gene=kdpB;Parent=GCA000144955_02102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2216,COG:P,RefSeq:WP_000546616.1,SO:0001217,UniParc:UPI0001DD9BC8,UniRef:UniRef100_UPI0001DD9BC8,UniRef:UniRef50_P63683,UniRef:UniRef90_P63683;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2149456	2151132	.	-	.	ID=GCA000144955_02103_gene;locus_tag=GCA000144955_02103;gene=kdpA
contig_1	Pyrodigal	CDS	2149456	2151132	.	-	0	ID=GCA000144955_02103;Name=potassium-transporting ATPase subunit KdpA;locus_tag=GCA000144955_02103;product=potassium-transporting ATPase subunit KdpA;Dbxref=GO:0005886,GO:0006813,GO:0008556,GO:0030955,GO:0031004;gene=kdpA;Parent=GCA000144955_02103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2060,COG:P,KEGG:K01546,RefSeq:WP_000402632.1,SO:0001217,UniParc:UPI0001DD9BC9,UniRef:UniRef100_UPI0001DD9BC9,UniRef:UniRef50_Q2FWH9,UniRef:UniRef90_Q2FWH9;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2151404	2153926	.	+	.	ID=GCA000144955_02104_gene;locus_tag=GCA000144955_02104;gene=kdpD
contig_1	Pyrodigal	CDS	2151404	2153926	.	+	0	ID=GCA000144955_02104;Name=Sensor histidine kinase KdpD;locus_tag=GCA000144955_02104;product=Sensor histidine kinase KdpD;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=kdpD;Parent=GCA000144955_02104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2205,COG:T,SO:0001217,UniRef:UniRef50_Q2FWH7,UniRef:UniRef90_Q2FWH7;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2154051	2154746	.	+	.	ID=GCA000144955_02105_gene;locus_tag=GCA000144955_02105;gene=kdpE
contig_1	Pyrodigal	CDS	2154051	2154746	.	+	0	ID=GCA000144955_02105;Name=Transcriptional regulatory protein KdpE;locus_tag=GCA000144955_02105;product=Transcriptional regulatory protein KdpE;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=kdpE;Parent=GCA000144955_02105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001190845.1,SO:0001217,UniParc:UPI00003B184F,UniRef:UniRef100_A0A0H2JZU7,UniRef:UniRef50_Q2FWH6,UniRef:UniRef90_Q2FWH6
contig_1	Pyrodigal	gene	2155098	2156618	.	-	.	ID=GCA000144955_02106_gene;locus_tag=GCA000144955_02106;gene=cshA
contig_1	Pyrodigal	CDS	2155098	2156618	.	-	0	ID=GCA000144955_02106;Name=DEAD-box ATP-dependent RNA helicase CshA;locus_tag=GCA000144955_02106;product=DEAD-box ATP-dependent RNA helicase CshA;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0005840,GO:0006401,GO:0009409,GO:0010501,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshA;Parent=GCA000144955_02106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001178941.1,SO:0001217,UniParc:UPI0001DD9D77,UniRef:UniRef100_UPI0001DD9D77,UniRef:UniRef50_Q2FWH5,UniRef:UniRef90_Q2FWH5;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	2157135	2158493	.	-	.	ID=GCA000144955_02107_gene;locus_tag=GCA000144955_02107;gene=murF
contig_1	Pyrodigal	CDS	2157135	2158493	.	-	0	ID=GCA000144955_02107;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000144955_02107;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008766,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000144955_02107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,RefSeq:WP_000611476.1,SO:0001217,UniParc:UPI0001DD9D78,UniRef:UniRef100_UPI0001DD9D78,UniRef:UniRef50_Q2FWH4,UniRef:UniRef90_Q2FWH4;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	2158508	2159578	.	-	.	ID=GCA000144955_02108_gene;locus_tag=GCA000144955_02108;gene=ddl
contig_1	Pyrodigal	CDS	2158508	2159578	.	-	0	ID=GCA000144955_02108;Name=D-alanine--D-alanine ligase;locus_tag=GCA000144955_02108;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddl;Parent=GCA000144955_02108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_000159631.1,SO:0001217,UniParc:UPI00001290BE,UniRef:UniRef100_Q2FWH3,UniRef:UniRef50_Q8NVH8,UniRef:UniRef90_Q8NVH8;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	2159896	2161098	.	+	.	ID=GCA000144955_02109_gene;locus_tag=GCA000144955_02109;gene=ftsW
contig_1	Pyrodigal	CDS	2159896	2161098	.	+	0	ID=GCA000144955_02109;Name=Rod shape-determining protein RodA;locus_tag=GCA000144955_02109;product=Rod shape-determining protein RodA;gene=ftsW;Parent=GCA000144955_02109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_001109939.1,SO:0001217,UniParc:UPI00000545D2,UniRef:UniRef100_Q2FWH2,UniRef:UniRef50_Q2FWH2,UniRef:UniRef90_Q2FWH2
contig_1	Pyrodigal	gene	2161362	2161499	.	-	.	ID=GCA000144955_02110_gene;locus_tag=GCA000144955_02110
contig_1	Pyrodigal	CDS	2161362	2161499	.	-	0	ID=GCA000144955_02110;Name=Lmo0850 family protein;locus_tag=GCA000144955_02110;product=Lmo0850 family protein;Parent=GCA000144955_02110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000828354.1,SO:0001217,UniParc:UPI00000D7764,UniRef:UniRef100_Q2FWH1,UniRef:UniRef50_A0A0H2VHK0,UniRef:UniRef90_Q2FWH1
contig_1	Pyrodigal	gene	2161627	2161836	.	-	.	ID=GCA000144955_02111_gene;locus_tag=GCA000144955_02111;gene=csoZ
contig_1	Pyrodigal	CDS	2161627	2161836	.	-	0	ID=GCA000144955_02111;Name=putative copper chaperone CsoZ;locus_tag=GCA000144955_02111;product=putative copper chaperone CsoZ;gene=csoZ;Parent=GCA000144955_02111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000581792.1,SO:0001217,UniParc:UPI00000545D4,UniRef:UniRef100_Q2FWH0,UniRef:UniRef50_Q2FWH0,UniRef:UniRef90_Q2FWH0
contig_1	Pyrodigal	gene	2161848	2162141	.	-	.	ID=GCA000144955_02112_gene;locus_tag=GCA000144955_02112;gene=csoR
contig_1	Pyrodigal	CDS	2161848	2162141	.	-	0	ID=GCA000144955_02112;Name=copper-sensing transcriptional repressor CsoR;locus_tag=GCA000144955_02112;product=copper-sensing transcriptional repressor CsoR;gene=csoR;Parent=GCA000144955_02112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000138932,COG:COG1937,COG:K,KEGG:K21600,RefSeq:WP_000138934.1,SO:0001217,UniParc:UPI0001B70141,UniRef:UniRef100_A0A0E1X8G5,UniRef:UniRef50_K9AII0,UniRef:UniRef90_Q2FWG9
contig_1	Pyrodigal	gene	2162307	2163791	.	+	.	ID=GCA000144955_02113_gene;locus_tag=GCA000144955_02113;gene=cls
contig_1	Pyrodigal	CDS	2162307	2163791	.	+	0	ID=GCA000144955_02113;Name=cardiolipin synthase;locus_tag=GCA000144955_02113;product=cardiolipin synthase;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000144955_02113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_000571545.1,SO:0001217,UniParc:UPI0001DD9D79,UniRef:UniRef100_UPI0001DD9D79,UniRef:UniRef50_Q8Y4E3,UniRef:UniRef90_Q5HEB2;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2163819	2164466	.	+	.	ID=GCA000144955_02114_gene;locus_tag=GCA000144955_02114;gene=rnaY
contig_1	Pyrodigal	CDS	2163819	2164466	.	+	0	ID=GCA000144955_02114;Name=HD domain-containing protein;locus_tag=GCA000144955_02114;product=HD domain-containing protein;gene=rnaY;Parent=GCA000144955_02114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,KEGG:K06950,RefSeq:WP_001187622.1,SO:0001217,UniParc:UPI0001DD9D7A,UniRef:UniRef100_UPI0001DD9D7A,UniRef:UniRef50_Q2FWG7,UniRef:UniRef90_Q2FWG7
contig_1	Pyrodigal	gene	2165215	2166087	.	-	.	ID=GCA000144955_02115_gene;locus_tag=GCA000144955_02115;gene=yidC
contig_1	Pyrodigal	CDS	2165215	2166087	.	-	0	ID=GCA000144955_02115;Name=Membrane protein insertase YidC;locus_tag=GCA000144955_02115;product=Membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000144955_02115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_000725802.1,SO:0001217,UniParc:UPI00000522A6,UniRef:UniRef100_Q2FWG4,UniRef:UniRef50_Q8CMK8,UniRef:UniRef90_Q2FWG4
contig_1	Pyrodigal	gene	2166173	2166814	.	-	.	ID=GCA000144955_02116_gene;locus_tag=GCA000144955_02116;gene=thiE
contig_1	Pyrodigal	CDS	2166173	2166814	.	-	0	ID=GCA000144955_02116;Name=Thiamine-phosphate synthase;locus_tag=GCA000144955_02116;product=Thiamine-phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000144955_02116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0352,COG:H,RefSeq:WP_000483146.1,SO:0001217,UniParc:UPI0001DD9D7B,UniRef:UniRef100_UPI0001DD9D7B,UniRef:UniRef50_Q5HMD0,UniRef:UniRef90_Q2FWG3;ec_number=2.5.1.3
contig_1	Pyrodigal	gene	2166816	2167607	.	-	.	ID=GCA000144955_02117_gene;locus_tag=GCA000144955_02117;gene=thiM
contig_1	Pyrodigal	CDS	2166816	2167607	.	-	0	ID=GCA000144955_02117;Name=hydroxyethylthiazole kinase;locus_tag=GCA000144955_02117;product=hydroxyethylthiazole kinase;Dbxref=GO:0000287,GO:0004417,GO:0005524,GO:0009228,GO:0009229;gene=thiM;Parent=GCA000144955_02117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2145,COG:H,RefSeq:WP_001108486.1,SO:0001217,UniParc:UPI0001C0BDF3,UniRef:UniRef100_A0A454GZU7,UniRef:UniRef50_Q6GEY3,UniRef:UniRef90_Q6GEY3;ec_number=2.7.1.50
contig_1	Pyrodigal	gene	2167591	2168421	.	-	.	ID=GCA000144955_02118_gene;locus_tag=GCA000144955_02118;gene=thiD
contig_1	Pyrodigal	CDS	2167591	2168421	.	-	0	ID=GCA000144955_02118;Name=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;locus_tag=GCA000144955_02118;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229;gene=thiD;Parent=GCA000144955_02118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_000594969.1,SO:0001217,UniParc:UPI0001DD9D7C,UniRef:UniRef100_UPI0001DD9D7C,UniRef:UniRef50_P66915,UniRef:UniRef90_P66915;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	2168414	2169103	.	-	.	ID=GCA000144955_02119_gene;locus_tag=GCA000144955_02119;gene=tenA
contig_1	Pyrodigal	CDS	2168414	2169103	.	-	0	ID=GCA000144955_02119;Name=thiaminase II;locus_tag=GCA000144955_02119;product=thiaminase II;Dbxref=GO:0005829,GO:0006772,GO:0009228,GO:0009229,GO:0050334;gene=tenA;Parent=GCA000144955_02119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0819,COG:H,RefSeq:WP_000396065.1,SO:0001217,UniParc:UPI0001DD9D7D,UniRef:UniRef100_UPI0001DD9D7D,UniRef:UniRef50_Q6GEY1,UniRef:UniRef90_Q6GEY1;ec_number=3.5.99.2
contig_1	Infernal	regulatory_region	2169183	2169285	3e-13	-	.	ID=BPGLLONNDN_172;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	2169628	2170323	.	-	.	ID=GCA000144955_02120_gene;locus_tag=GCA000144955_02120;gene=sceD
contig_1	Pyrodigal	CDS	2169628	2170323	.	-	0	ID=GCA000144955_02120;Name=lytic transglycosylase SceD;locus_tag=GCA000144955_02120;product=lytic transglycosylase SceD;Dbxref=GO:0005576,GO:0016798;gene=sceD;Parent=GCA000144955_02120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000752009,RefSeq:WP_000752003.1,SO:0001217,UniParc:UPI0001DD9D7E,UniRef:UniRef100_UPI0001DD9D7E,UniRef:UniRef50_Q2FWF8,UniRef:UniRef90_Q2FWF8;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2170711	2171106	.	-	.	ID=GCA000144955_02121_gene;locus_tag=GCA000144955_02121;gene=ssb
contig_1	Pyrodigal	CDS	2170711	2171106	.	-	0	ID=GCA000144955_02121;Name=Single-stranded DNA-binding protein;locus_tag=GCA000144955_02121;product=Single-stranded DNA-binding protein;gene=ssb;Parent=GCA000144955_02121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000932694.1,SO:0001217,UniParc:UPI00000545E3,UniRef:UniRef100_Q2FWF7,UniRef:UniRef50_K9AX51,UniRef:UniRef90_A0A7U7PX14
contig_1	Pyrodigal	gene	2171300	2171740	.	+	.	ID=GCA000144955_02122_gene;locus_tag=GCA000144955_02122;gene=ywpF
contig_1	Pyrodigal	CDS	2171300	2171740	.	+	0	ID=GCA000144955_02122;Name=YwpF protein;locus_tag=GCA000144955_02122;product=YwpF protein;gene=ywpF;Parent=GCA000144955_02122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846750.1,SO:0001217,UniParc:UPI0001DD9D7F,UniRef:UniRef100_A0AAE6KBU8,UniRef:UniRef50_Q2FWF6,UniRef:UniRef90_Q2FWF6
contig_1	Pyrodigal	gene	2171797	2172237	.	-	.	ID=GCA000144955_02123_gene;locus_tag=GCA000144955_02123;gene=fabZ
contig_1	Pyrodigal	CDS	2171797	2172237	.	-	0	ID=GCA000144955_02123;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA000144955_02123;product=3-hydroxyacyl-ACP dehydratase FabZ;Dbxref=GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171;gene=fabZ;Parent=GCA000144955_02123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,RefSeq:WP_000447678.1,SO:0001217,UniParc:UPI00000545E6,UniRef:UniRef100_Q2FWF5,UniRef:UniRef50_Q2FWF5,UniRef:UniRef90_Q2FWF5;ec_number=4.2.1.59
contig_1	Pyrodigal	gene	2172271	2173536	.	-	.	ID=GCA000144955_02124_gene;locus_tag=GCA000144955_02124;gene=murA
contig_1	Pyrodigal	CDS	2172271	2173536	.	-	0	ID=GCA000144955_02124;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000144955_02124;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA;Parent=GCA000144955_02124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00790,RefSeq:WP_000358002.1,SO:0001217,UniParc:UPI000175BB74,UniRef:UniRef100_A0A0U1MRU2,UniRef:UniRef50_P33986,UniRef:UniRef90_Q6GEX5;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2173647	2173880	.	-	.	ID=GCA000144955_02125_gene;locus_tag=GCA000144955_02125;gene=ywzB
contig_1	Pyrodigal	CDS	2173647	2173880	.	-	0	ID=GCA000144955_02125;Name=DUF1146 domain-containing protein;locus_tag=GCA000144955_02125;product=DUF1146 domain-containing protein;gene=ywzB;Parent=GCA000144955_02125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4836,COG:S,RefSeq:WP_000384523.1,SO:0001217,UniParc:UPI00000545E8,UniRef:UniRef100_Q2FWF3,UniRef:UniRef50_Q2FWF3,UniRef:UniRef90_Q2FWF3
contig_1	Infernal	gene	2174315	2174537	.	-	.	ID=GCA000144955_02126_gene;locus_tag=GCA000144955_02126;gene=S35
contig_1	Infernal	ncRNA	2174315	2174537	6.3e-17	-	.	ID=GCA000144955_02126;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02126;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02126_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2174694	2175098	.	-	.	ID=GCA000144955_02127_gene;locus_tag=GCA000144955_02127;gene=atpC
contig_1	Pyrodigal	CDS	2174694	2175098	.	-	0	ID=GCA000144955_02127;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000144955_02127;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000144955_02127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_001094394.1,SO:0001217,UniParc:UPI00000545E9,UniRef:UniRef100_Q2FWF1,UniRef:UniRef50_Q8CNJ8,UniRef:UniRef90_Q2FWF1;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2175118	2176530	.	-	.	ID=GCA000144955_02128_gene;locus_tag=GCA000144955_02128;gene=atpD
contig_1	Pyrodigal	CDS	2175118	2176530	.	-	0	ID=GCA000144955_02128;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000144955_02128;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000144955_02128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_000511135.1,SO:0001217,UniParc:UPI00000545EA,UniRef:UniRef100_Q2FWF0,UniRef:UniRef50_P50002,UniRef:UniRef90_Q2FWF0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2176552	2177418	.	-	.	ID=GCA000144955_02129_gene;locus_tag=GCA000144955_02129;gene=atpG
contig_1	Pyrodigal	CDS	2176552	2177418	.	-	0	ID=GCA000144955_02129;Name=ATP synthase F1 subunit gamma;locus_tag=GCA000144955_02129;product=ATP synthase F1 subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000144955_02129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,RefSeq:WP_000157600.1,SO:0001217,UniParc:UPI0001DD9D81,UniRef:UniRef100_UPI0001DD9D81,UniRef:UniRef50_Q49Z51,UniRef:UniRef90_Q5HE96;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2177449	2178957	.	-	.	ID=GCA000144955_02130_gene;locus_tag=GCA000144955_02130;gene=atpA
contig_1	Pyrodigal	CDS	2177449	2178957	.	-	0	ID=GCA000144955_02130;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000144955_02130;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000144955_02130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_000974881.1,SO:0001217,UniParc:UPI00000545EC,UniRef:UniRef100_Q2FWE8,UniRef:UniRef50_P26679,UniRef:UniRef90_Q2FWE8;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2178979	2179518	.	-	.	ID=GCA000144955_02131_gene;locus_tag=GCA000144955_02131;gene=atpH
contig_1	Pyrodigal	CDS	2178979	2179518	.	-	0	ID=GCA000144955_02131;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA000144955_02131;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0005886,GO:0045261,GO:0046933;gene=atpH;Parent=GCA000144955_02131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_000241344.1,SO:0001217,UniParc:UPI00000D770A,UniRef:UniRef100_P63658,UniRef:UniRef50_Q2FWE7,UniRef:UniRef90_Q2FWE7;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2179518	2180039	.	-	.	ID=GCA000144955_02132_gene;locus_tag=GCA000144955_02132;gene=atpF
contig_1	Pyrodigal	CDS	2179518	2180039	.	-	0	ID=GCA000144955_02132;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000144955_02132;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0045263,GO:0046933,GO:0046961;gene=atpF;Parent=GCA000144955_02132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_000140679.1,SO:0001217,UniParc:UPI00000D78AB,UniRef:UniRef100_Q2G2F8,UniRef:UniRef50_Q49Z54,UniRef:UniRef90_Q6GEW8
contig_1	Pyrodigal	gene	2180237	2180449	.	-	.	ID=GCA000144955_02133_gene;locus_tag=GCA000144955_02133;gene=atpE
contig_1	Pyrodigal	CDS	2180237	2180449	.	-	0	ID=GCA000144955_02133;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000144955_02133;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000144955_02133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_001048816.1,SO:0001217,UniParc:UPI00000545F0,UniRef:UniRef100_Q2G2F6,UniRef:UniRef50_P37815,UniRef:UniRef90_Q2G2F6;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2180492	2181220	.	-	.	ID=GCA000144955_02134_gene;locus_tag=GCA000144955_02134;gene=atpB
contig_1	Pyrodigal	CDS	2180492	2181220	.	-	0	ID=GCA000144955_02134;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000144955_02134;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000144955_02134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_000349657.1,SO:0001217,UniParc:UPI0001DD9D82,UniRef:UniRef100_UPI0001DD9D82,UniRef:UniRef50_Q2G2F4,UniRef:UniRef90_Q2G2F4;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2181241	2181594	.	-	.	ID=GCA000144955_02135_gene;locus_tag=GCA000144955_02135
contig_1	Pyrodigal	CDS	2181241	2181594	.	-	0	ID=GCA000144955_02135;Name=ATP synthase F0%2C I subunit;locus_tag=GCA000144955_02135;product=ATP synthase F0%2C I subunit;Parent=GCA000144955_02135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005FE6D4,UniRef:UniRef100_A0A8G2M9R2,UniRef:UniRef50_A0A0U1MR76,UniRef:UniRef90_A0A0U1MR76
contig_1	Pyrodigal	gene	2181761	2182888	.	-	.	ID=GCA000144955_02136_gene;locus_tag=GCA000144955_02136;gene=wecB
contig_1	Pyrodigal	CDS	2181761	2182888	.	-	0	ID=GCA000144955_02136;Name=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;locus_tag=GCA000144955_02136;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;Dbxref=GO:0008761;gene=wecB;Parent=GCA000144955_02136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0381,COG:M,KEGG:K01791,RefSeq:WP_000723412.1,SO:0001217,UniParc:UPI0001DD9D83,UniRef:UniRef100_UPI0001DD9D83,UniRef:UniRef50_A0A2Y8PHC9,UniRef:UniRef90_A0A2Y8PHC9;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	2182912	2183541	.	-	.	ID=GCA000144955_02137_gene;locus_tag=GCA000144955_02137;gene=upp
contig_1	Pyrodigal	CDS	2182912	2183541	.	-	0	ID=GCA000144955_02137;Name=uracil phosphoribosyltransferase;locus_tag=GCA000144955_02137;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000144955_02137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_000048712.1,SO:0001217,UniParc:UPI00000545F4,UniRef:UniRef100_Q2FWE6,UniRef:UniRef50_Q9RU32,UniRef:UniRef90_Q2FWE6;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	2183569	2184807	.	-	.	ID=GCA000144955_02138_gene;locus_tag=GCA000144955_02138;gene=glyA
contig_1	Pyrodigal	CDS	2183569	2184807	.	-	0	ID=GCA000144955_02138;Name=Serine hydroxymethyltransferase;locus_tag=GCA000144955_02138;product=Serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005829,GO:0019264,GO:0030170,GO:0035999;gene=glyA;Parent=GCA000144955_02138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_000120494.1,SO:0001217,UniParc:UPI00000545F5,UniRef:UniRef100_Q2FWE5,UniRef:UniRef50_Q2FWE5,UniRef:UniRef90_Q2FWE5;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	2184834	2185358	.	-	.	ID=GCA000144955_02139_gene;locus_tag=GCA000144955_02139;gene=ywlG
contig_1	Pyrodigal	CDS	2184834	2185358	.	-	0	ID=GCA000144955_02139;Name=UPF0340 protein SAR2202;locus_tag=GCA000144955_02139;product=UPF0340 protein SAR2202;gene=ywlG;Parent=GCA000144955_02139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4475,COG:S,RefSeq:WP_000654181.1,SO:0001217,UniParc:UPI00005FE6D7,UniRef:UniRef100_Q2YUJ0,UniRef:UniRef50_Q2FWE4,UniRef:UniRef90_Q2FWE4
contig_1	Pyrodigal	gene	2185465	2185884	.	-	.	ID=GCA000144955_02140_gene;locus_tag=GCA000144955_02140;gene=ptpB
contig_1	Pyrodigal	CDS	2185465	2185884	.	-	0	ID=GCA000144955_02140;Name=Low molecular weight protein-tyrosine-phosphatase PtpB;locus_tag=GCA000144955_02140;product=Low molecular weight protein-tyrosine-phosphatase PtpB;Dbxref=GO:0004726,GO:0030946,GO:0140793;gene=ptpB;Parent=GCA000144955_02140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000697334.1,SO:0001217,UniParc:UPI000004740C,UniRef:UniRef100_Q2FWE3,UniRef:UniRef50_Q2FWE3,UniRef:UniRef90_Q2FWE3;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2185881	2186927	.	-	.	ID=GCA000144955_02141_gene;locus_tag=GCA000144955_02141;gene=tsaC
contig_1	Pyrodigal	CDS	2185881	2186927	.	-	0	ID=GCA000144955_02141;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000144955_02141;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000144955_02141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_000379890.1,SO:0001217,UniParc:UPI0001DD9D84,UniRef:UniRef100_UPI0001DD9D84,UniRef:UniRef50_A0A6K1LH12,UniRef:UniRef90_A0A6K1LH12;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	2187011	2187847	.	-	.	ID=GCA000144955_02142_gene;locus_tag=GCA000144955_02142;gene=prmC
contig_1	Pyrodigal	CDS	2187011	2187847	.	-	0	ID=GCA000144955_02142;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000144955_02142;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000144955_02142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,RefSeq:WP_000248727.1,SO:0001217,UniParc:UPI0001DD9D85,UniRef:UniRef100_UPI0001DD9D85,UniRef:UniRef50_Q2FWE1,UniRef:UniRef90_Q2FWE1;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	2187834	2188910	.	-	.	ID=GCA000144955_02143_gene;locus_tag=GCA000144955_02143;gene=prfA
contig_1	Pyrodigal	CDS	2187834	2188910	.	-	0	ID=GCA000144955_02143;Name=peptide chain release factor 1;locus_tag=GCA000144955_02143;product=peptide chain release factor 1;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000144955_02143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,RefSeq:WP_000460244.1,SO:0001217,UniParc:UPI00003B1866,UniRef:UniRef100_Q6GEV7,UniRef:UniRef50_B9DS45,UniRef:UniRef90_Q2FWE0
contig_1	Pyrodigal	gene	2188911	2189510	.	-	.	ID=GCA000144955_02144_gene;locus_tag=GCA000144955_02144;gene=tdk
contig_1	Pyrodigal	CDS	2188911	2189510	.	-	0	ID=GCA000144955_02144;Name=thymidine kinase;locus_tag=GCA000144955_02144;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897;gene=tdk;Parent=GCA000144955_02144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,RefSeq:WP_000273356.1,SO:0001217,UniParc:UPI00000D9F35,UniRef:UniRef100_Q2FF09,UniRef:UniRef50_Q5KUH1,UniRef:UniRef90_Q2FF09;ec_number=2.7.1.21
contig_1	Pyrodigal	gene	2189856	2190110	.	-	.	ID=GCA000144955_02145_gene;locus_tag=GCA000144955_02145;gene=rpmE2
contig_1	Pyrodigal	CDS	2189856	2190110	.	-	0	ID=GCA000144955_02145;Name=type B 50S ribosomal protein L31;locus_tag=GCA000144955_02145;product=type B 50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmE2;Parent=GCA000144955_02145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_000808968.1,SO:0001217,UniParc:UPI00000545FB,UniRef:UniRef100_Q2FWD8,UniRef:UniRef50_Q5HMA2,UniRef:UniRef90_Q5HMA2
contig_1	Pyrodigal	gene	2190228	2191544	.	-	.	ID=GCA000144955_02146_gene;locus_tag=GCA000144955_02146;gene=rho
contig_1	Pyrodigal	CDS	2190228	2191544	.	-	0	ID=GCA000144955_02146;Name=transcription termination factor Rho;locus_tag=GCA000144955_02146;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0005524,GO:0006353,GO:0008186;gene=rho;Parent=GCA000144955_02146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,KEGG:K03628,RefSeq:WP_001115101.1,SO:0001217,UniParc:UPI00000D7733,UniRef:UniRef100_A0A133PU93,UniRef:UniRef50_A0A2D6ZY33,UniRef:UniRef90_A0A133PU93;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	2191791	2193218	.	-	.	ID=GCA000144955_02147_gene;locus_tag=GCA000144955_02147;gene=adhE
contig_1	Pyrodigal	CDS	2191791	2193218	.	-	0	ID=GCA000144955_02147;Name=Putative aldehyde dehydrogenase;locus_tag=GCA000144955_02147;product=Putative aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0006081;gene=adhE;Parent=GCA000144955_02147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001206107.1,SO:0001217,UniParc:UPI00003B1867,UniRef:UniRef100_Q6GEV3,UniRef:UniRef50_Q4L803,UniRef:UniRef90_Q2FWD6;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	2193457	2193792	.	-	.	ID=GCA000144955_02148_gene;locus_tag=GCA000144955_02148;gene=hxlR
contig_1	Pyrodigal	CDS	2193457	2193792	.	-	0	ID=GCA000144955_02148;Name=HTH hxlR-type domain-containing protein;locus_tag=GCA000144955_02148;product=HTH hxlR-type domain-containing protein;gene=hxlR;Parent=GCA000144955_02148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1733,COG:K,RefSeq:WP_000451438.1,SO:0001217,UniParc:UPI00004B5C7F,UniRef:UniRef100_A0AA43V3D6,UniRef:UniRef50_B9DMD6,UniRef:UniRef90_A0A7U7PWB3
contig_1	Pyrodigal	gene	2193881	2195140	.	-	.	ID=GCA000144955_02149_gene;locus_tag=GCA000144955_02149;gene=murA2
contig_1	Pyrodigal	CDS	2193881	2195140	.	-	0	ID=GCA000144955_02149;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000144955_02149;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA2;Parent=GCA000144955_02149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_000046602.1,SO:0001217,UniParc:UPI00000545FF,UniRef:UniRef100_Q5HE76,UniRef:UniRef50_P19670,UniRef:UniRef90_Q6GEV1;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2195606	2196466	.	-	.	ID=GCA000144955_02150_gene;locus_tag=GCA000144955_02150;gene=fba
contig_1	Pyrodigal	CDS	2195606	2196466	.	-	0	ID=GCA000144955_02150;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000144955_02150;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096,GO:0008270,GO:0030388;gene=fba;Parent=GCA000144955_02150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_001131843.1,SO:0001217,UniParc:UPI0001DD9F13,UniRef:UniRef100_UPI0001DD9F13,UniRef:UniRef50_P94453,UniRef:UniRef90_Q5HM97;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2196684	2197205	.	+	.	ID=GCA000144955_02151_gene;locus_tag=GCA000144955_02151
contig_1	Pyrodigal	CDS	2196684	2197205	.	+	0	ID=GCA000144955_02151;Name=DUF2529 domain-containing protein;locus_tag=GCA000144955_02151;product=DUF2529 domain-containing protein;Parent=GCA000144955_02151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036009.1,SO:0001217,UniParc:UPI0001DD9F14,UniRef:UniRef100_UPI0001DD9F14,UniRef:UniRef50_Q2FWD2,UniRef:UniRef90_Q2FWD2
contig_1	Pyrodigal	gene	2197314	2198924	.	-	.	ID=GCA000144955_02152_gene;locus_tag=GCA000144955_02152;gene=pyrG
contig_1	Pyrodigal	CDS	2197314	2198924	.	-	0	ID=GCA000144955_02152;Name=CTP synthase;locus_tag=GCA000144955_02152;product=CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0006241,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000144955_02152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,RefSeq:WP_000159960.1,SO:0001217,UniParc:UPI0000132D80,UniRef:UniRef100_Q2FF01,UniRef:UniRef50_Q8Y495,UniRef:UniRef90_Q2FWD1;ec_number=6.3.4.2
contig_1	Infernal	gene	2199143	2199212	.	-	.	ID=GCA000144955_02153_gene;locus_tag=GCA000144955_02153;gene=tsr31
contig_1	Infernal	ncRNA	2199143	2199212	6.5e-16	-	.	ID=GCA000144955_02153;Name=S. aureus tsr31 small RNA;locus_tag=GCA000144955_02153;product=S. aureus tsr31 small RNA;Dbxref=RFAM:RF02580;Parent=GCA000144955_02153_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02580
contig_1	Pyrodigal	gene	2199260	2199790	.	-	.	ID=GCA000144955_02154_gene;locus_tag=GCA000144955_02154;gene=rpoE
contig_1	Pyrodigal	CDS	2199260	2199790	.	-	0	ID=GCA000144955_02154;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000144955_02154;product=DNA-directed RNA polymerase subunit delta;Dbxref=GO:0000428,GO:0003899,GO:0006351,GO:0006355;gene=rpoE;Parent=GCA000144955_02154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3343,COG:K,KEGG:K03048,RefSeq:WP_000701488.1,SO:0001217,UniParc:UPI0001B3AFE4,UniRef:UniRef100_A0A0S3E242,UniRef:UniRef50_Q2FWD0,UniRef:UniRef90_Q2FWD0;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2199902	2200762	.	-	.	ID=GCA000144955_02155_gene;locus_tag=GCA000144955_02155;gene=rimL
contig_1	Pyrodigal	CDS	2199902	2200762	.	-	0	ID=GCA000144955_02155;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02155;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000144955_02155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_001040745.1,SO:0001217,UniParc:UPI0001DD9F15,UniRef:UniRef100_UPI0001DD9F15,UniRef:UniRef50_Q2FWC9,UniRef:UniRef90_Q2FWC9
contig_1	Pyrodigal	gene	2201186	2201989	.	+	.	ID=GCA000144955_02156_gene;locus_tag=GCA000144955_02156;gene=coaW
contig_1	Pyrodigal	CDS	2201186	2201989	.	+	0	ID=GCA000144955_02156;Name=type II pantothenate kinase;locus_tag=GCA000144955_02156;product=type II pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005829,GO:0015937;gene=coaW;Parent=GCA000144955_02156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5146,COG:H,RefSeq:WP_000862728.1,SO:0001217,UniParc:UPI00000CAA65,UniRef:UniRef100_Q99SC8,UniRef:UniRef50_Q2FWC7,UniRef:UniRef90_Q2FWC7;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	2202119	2202790	.	-	.	ID=GCA000144955_02157_gene;locus_tag=GCA000144955_02157
contig_1	Pyrodigal	CDS	2202119	2202790	.	-	0	ID=GCA000144955_02157;Name=DUF2750 domain-containing protein;locus_tag=GCA000144955_02157;product=DUF2750 domain-containing protein;Parent=GCA000144955_02157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120549.1,SO:0001217,UniParc:UPI0000054607,UniRef:UniRef100_Q2FWC6,UniRef:UniRef50_Q2FWC6,UniRef:UniRef90_Q2FWC6
contig_1	Pyrodigal	gene	2203189	2204382	.	-	.	ID=GCA000144955_02158_gene;locus_tag=GCA000144955_02158;gene=accC
contig_1	Pyrodigal	CDS	2203189	2204382	.	-	0	ID=GCA000144955_02158;Name=L-aspartate--L-methionine ligase;locus_tag=GCA000144955_02158;product=L-aspartate--L-methionine ligase;Dbxref=GO:0000096,GO:0000287,GO:0005524,GO:0006555,GO:0016881,GO:0034026,GO:0042802,GO:0042803,GO:1901605;gene=accC;Parent=GCA000144955_02158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,KEGG:K27344,RefSeq:WP_000183721.1,SO:0001217,UniParc:UPI0001DD9F16,UniRef:UniRef100_UPI0001DD9F16,UniRef:UniRef50_Q2FWC5,UniRef:UniRef90_Q2FWC5;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	2204382	2205566	.	-	.	ID=GCA000144955_02159_gene;locus_tag=GCA000144955_02159;gene=abgB
contig_1	Pyrodigal	CDS	2204382	2205566	.	-	0	ID=GCA000144955_02159;Name=Peptidase M20 domain-containing protein 2;locus_tag=GCA000144955_02159;product=Peptidase M20 domain-containing protein 2;gene=abgB;Parent=GCA000144955_02159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001291502.1,SO:0001217,UniParc:UPI000175C2DB,UniRef:UniRef100_A0A6A9GYY3,UniRef:UniRef50_Q79EU8,UniRef:UniRef90_Q79EU8
contig_1	Pyrodigal	gene	2205877	2206347	.	+	.	ID=GCA000144955_02160_gene;locus_tag=GCA000144955_02160;gene=luxS
contig_1	Pyrodigal	CDS	2205877	2206347	.	+	0	ID=GCA000144955_02160;Name=S-ribosylhomocysteine lyase;locus_tag=GCA000144955_02160;product=S-ribosylhomocysteine lyase;Dbxref=GO:0005506,GO:0009372,GO:0043768;gene=luxS;Parent=GCA000144955_02160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,KEGG:K07173,RefSeq:WP_000164421.1,SO:0001217,UniParc:UPI0000054609,UniRef:UniRef100_Q2FWC3,UniRef:UniRef50_Q9ZMW8,UniRef:UniRef90_Q2FWC3;ec_number=4.4.1.21
contig_1	Pyrodigal	gene	2206499	2206849	.	-	.	ID=GCA000144955_02161_gene;locus_tag=GCA000144955_02161;gene=doxX
contig_1	Pyrodigal	CDS	2206499	2206849	.	-	0	ID=GCA000144955_02161;Name=DoxX family membrane protein;locus_tag=GCA000144955_02161;product=DoxX family membrane protein;gene=doxX;Parent=GCA000144955_02161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4270,COG:R,RefSeq:WP_001024034.1,SO:0001217,UniParc:UPI00005FE6E2,UniRef:UniRef100_A0A2S6D4F6,UniRef:UniRef50_B9DJX6,UniRef:UniRef90_Q2FWC2
contig_1	Pyrodigal	gene	2206863	2208164	.	-	.	ID=GCA000144955_02162_gene;locus_tag=GCA000144955_02162;gene=pdp
contig_1	Pyrodigal	CDS	2206863	2208164	.	-	0	ID=GCA000144955_02162;Name=pyrimidine-nucleoside phosphorylase;locus_tag=GCA000144955_02162;product=pyrimidine-nucleoside phosphorylase;Dbxref=GO:0004645,GO:0004850,GO:0005829,GO:0006206,GO:0006213,GO:0009032,GO:0016154,GO:0046872,GO:0047847;gene=pdp;Parent=GCA000144955_02162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0213,COG:F,KEGG:K04047,RefSeq:WP_001242302.1,SO:0001217,UniParc:UPI0001DD9F17,UniRef:UniRef100_UPI0001DD9F17,UniRef:UniRef50_Q99SC3,UniRef:UniRef90_Q99SC3;ec_number=2.4.2.2
contig_1	Pyrodigal	gene	2208444	2209106	.	-	.	ID=GCA000144955_02163_gene;locus_tag=GCA000144955_02163;gene=deoC
contig_1	Pyrodigal	CDS	2208444	2209106	.	-	0	ID=GCA000144955_02163;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000144955_02163;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000144955_02163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,KEGG:K01619,RefSeq:WP_001083322.1,SO:0001217,UniParc:UPI0001DD9F18,UniRef:UniRef100_UPI0001DD9F18,UniRef:UniRef50_Q6GKG7,UniRef:UniRef90_Q6GKG7;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	2209420	2210130	.	+	.	ID=GCA000144955_02164_gene;locus_tag=GCA000144955_02164;gene=deoD
contig_1	Pyrodigal	CDS	2209420	2210130	.	+	0	ID=GCA000144955_02164;Name=purine-nucleoside phosphorylase;locus_tag=GCA000144955_02164;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000144955_02164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000160304.1,SO:0001217,UniParc:UPI000005460E,UniRef:UniRef100_Q2FWB8,UniRef:UniRef50_A0A1C5V1M1,UniRef:UniRef90_A0A2K4AEZ2;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2210251	2210694	.	-	.	ID=GCA000144955_02165_gene;locus_tag=GCA000144955_02165;gene=dps
contig_1	Pyrodigal	CDS	2210251	2210694	.	-	0	ID=GCA000144955_02165;Name=DNA starvation/stationary phase protection protein;locus_tag=GCA000144955_02165;product=DNA starvation/stationary phase protection protein;gene=dps;Parent=GCA000144955_02165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_000070865.1,SO:0001217,UniParc:UPI0001B3AF7A,UniRef:UniRef100_A0AA44A5S3,UniRef:UniRef50_A0A9Q9F1A2,UniRef:UniRef90_A0A2K4AF10
contig_1	Pyrodigal	gene	2210894	2211307	.	-	.	ID=GCA000144955_02166_gene;locus_tag=GCA000144955_02166;gene=yuxK
contig_1	Pyrodigal	CDS	2210894	2211307	.	-	0	ID=GCA000144955_02166;Name=DUF393 domain-containing protein;locus_tag=GCA000144955_02166;product=DUF393 domain-containing protein;gene=yuxK;Parent=GCA000144955_02166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3011,COG:R,RefSeq:WP_001123298.1,SO:0001217,UniParc:UPI0001DD9F19,UniRef:UniRef100_A0A6B1RNN6,UniRef:UniRef50_Q2FWB6,UniRef:UniRef90_Q2FWB6
contig_1	Pyrodigal	gene	2211773	2213146	.	-	.	ID=GCA000144955_02167_gene;locus_tag=GCA000144955_02167;gene=eVE
contig_1	Pyrodigal	CDS	2211773	2213146	.	-	0	ID=GCA000144955_02167;Name=EVE domain-containing protein;locus_tag=GCA000144955_02167;product=EVE domain-containing protein;gene=eVE;Parent=GCA000144955_02167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2947,COG:R,RefSeq:WP_000123403.1,SO:0001217,UniParc:UPI0001DD9F1A,UniRef:UniRef100_UPI0001DD9F1A,UniRef:UniRef50_Q49Z89,UniRef:UniRef90_Q2FWB5
contig_1	Pyrodigal	gene	2213820	2214050	.	-	.	ID=GCA000144955_02168_gene;locus_tag=GCA000144955_02168
contig_1	Pyrodigal	CDS	2213820	2214050	.	-	0	ID=GCA000144955_02168;Name=Integral membrane protein;locus_tag=GCA000144955_02168;product=Integral membrane protein;Parent=GCA000144955_02168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000808817.1,SO:0001217,UniParc:UPI00000D76A1,UniRef:UniRef100_Q2FWB4,UniRef:UniRef50_Q2FWB4,UniRef:UniRef90_Q2FWB4
contig_1	Pyrodigal	gene	2214081	2215019	.	-	.	ID=GCA000144955_02169_gene;locus_tag=GCA000144955_02169;gene=manA
contig_1	Pyrodigal	CDS	2214081	2215019	.	-	0	ID=GCA000144955_02169;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000144955_02169;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000144955_02169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001127960.1,SO:0001217,UniParc:UPI00000D7844,UniRef:UniRef100_A0A7U7EZF3,UniRef:UniRef50_A0A0A8HNJ1,UniRef:UniRef90_A0A0E1XIN3;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2215456	2216121	.	-	.	ID=GCA000144955_02170_gene;locus_tag=GCA000144955_02170;gene=ybjT
contig_1	Pyrodigal	CDS	2215456	2216121	.	-	0	ID=GCA000144955_02170;Name=putative sugar epimerase YhfK;locus_tag=GCA000144955_02170;product=putative sugar epimerase YhfK;gene=ybjT;Parent=GCA000144955_02170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024084.1,SO:0001217,UniParc:UPI0001DD9F1B,UniRef:UniRef100_UPI0001DD9F1B,UniRef:UniRef50_A0A1W7A9I9,UniRef:UniRef90_A0A7U7JQM2
contig_1	Pyrodigal	gene	2216273	2216593	.	+	.	ID=GCA000144955_02171_gene;locus_tag=GCA000144955_02171;gene=czrA
contig_1	Pyrodigal	CDS	2216273	2216593	.	+	0	ID=GCA000144955_02171;Name=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;locus_tag=GCA000144955_02171;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;gene=czrA;Parent=GCA000144955_02171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000003759,BlastRules:WP_002499956,BlastRules:WP_003231284,COG:COG0640,COG:K,RefSeq:WP_000003759.1,SO:0001217,UniParc:UPI0000054616,UniRef:UniRef100_Q2FWB0,UniRef:UniRef50_Q2FWB0,UniRef:UniRef90_Q2FWB0
contig_1	Pyrodigal	gene	2216595	2217575	.	+	.	ID=GCA000144955_02172_gene;locus_tag=GCA000144955_02172;gene=czrB
contig_1	Pyrodigal	CDS	2216595	2217575	.	+	0	ID=GCA000144955_02172;Name=CDF family zinc efflux transporter CzrB;locus_tag=GCA000144955_02172;product=CDF family zinc efflux transporter CzrB;gene=czrB;Parent=GCA000144955_02172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_128146008,COG:COG1230,COG:P,RefSeq:WP_000019744.1,SO:0001217,UniParc:UPI00004B5C82,UniRef:UniRef100_Q2FWA9,UniRef:UniRef50_A0A7U7JQM3,UniRef:UniRef90_A0A7U7JQM3
contig_1	Pyrodigal	gene	2217841	2218932	.	+	.	ID=GCA000144955_02173_gene;locus_tag=GCA000144955_02173
contig_1	Pyrodigal	CDS	2217841	2218932	.	+	0	ID=GCA000144955_02173;Name=Transcriptional regulator;locus_tag=GCA000144955_02173;product=Transcriptional regulator;Parent=GCA000144955_02173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495696.1,SO:0001217,UniParc:UPI0001DD9F1C,UniRef:UniRef100_UPI0012478617,UniRef:UniRef50_A0A0E1X8C7,UniRef:UniRef90_A0A0E1X8C7
contig_1	Infernal	gene	2219784	2219964	.	-	.	ID=GCA000144955_02174_gene;locus_tag=GCA000144955_02174;gene=rli28
contig_1	Infernal	ncRNA	2219784	2219964	8.6e-16	-	.	ID=GCA000144955_02174;Name=Listeria sRNA rli28;locus_tag=GCA000144955_02174;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000144955_02174_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	2220725	2220817	.	+	.	ID=GCA000144955_02175_gene;locus_tag=GCA000144955_02175
contig_1	Pyrodigal	CDS	2220725	2220817	.	+	0	ID=GCA000144955_02175;Name=Erm Leader peptide;locus_tag=GCA000144955_02175;product=Erm Leader peptide;Parent=GCA000144955_02175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A418IIG6,UniRef:UniRef90_A0A659I790
contig_1	Pyrodigal	gene	2220946	2221803	.	-	.	ID=GCA000144955_02176_gene;locus_tag=GCA000144955_02176;gene=cof
contig_1	Pyrodigal	CDS	2220946	2221803	.	-	0	ID=GCA000144955_02176;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000144955_02176;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000144955_02176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000370915.1,SO:0001217,UniParc:UPI0001DD9F1D,UniRef:UniRef100_UPI0001DD9F1D,UniRef:UniRef50_Q2FWA2,UniRef:UniRef90_Q2FWA2
contig_1	Pyrodigal	gene	2221870	2222652	.	-	.	ID=GCA000144955_02177_gene;locus_tag=GCA000144955_02177
contig_1	Pyrodigal	CDS	2221870	2222652	.	-	0	ID=GCA000144955_02177;Name=ATP-binding ATP transporter protein;locus_tag=GCA000144955_02177;product=ATP-binding ATP transporter protein;Parent=GCA000144955_02177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000909234.1,SO:0001217,UniParc:UPI0001DD9F1E,UniRef:UniRef100_UPI0001DD9F1E,UniRef:UniRef50_Q4L835,UniRef:UniRef90_A0A077UUX7
contig_1	Pyrodigal	gene	2222879	2224684	.	-	.	ID=GCA000144955_02178_gene;locus_tag=GCA000144955_02178;gene=glmS
contig_1	Pyrodigal	CDS	2222879	2224684	.	-	0	ID=GCA000144955_02178;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000144955_02178;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000144955_02178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0449,COG:M,KEGG:K00820,RefSeq:WP_000334463.1,SO:0001217,UniParc:UPI0000165A31,UniRef:UniRef100_P64227,UniRef:UniRef50_Q88YE7,UniRef:UniRef90_Q6GES3;ec_number=2.6.1.16
contig_1	Infernal	regulatory_region	2224886	2225102	1.3e-18	-	.	ID=BPGLLONNDN_160;Name=glmS glucosamine-6-phosphate activated ribozyme aptamer;product=glmS glucosamine-6-phosphate activated ribozyme aptamer;Dbxref=RFAM:RF00234;inference=profile:Rfam:RF00234;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2225365	2226903	.	+	.	ID=GCA000144955_02179_gene;locus_tag=GCA000144955_02179;gene=mtlA
contig_1	Pyrodigal	CDS	2225365	2226903	.	+	0	ID=GCA000144955_02179;Name=PTS system mannitol-specific EIICB component;locus_tag=GCA000144955_02179;product=PTS system mannitol-specific EIICB component;Dbxref=GO:0005886,GO:0009401,GO:0016301,GO:0022872,GO:0090563;gene=mtlA;Parent=GCA000144955_02179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2213,COG:G,KEGG:K02800,RefSeq:WP_000083790.1,SO:0001217,UniParc:UPI0001DD9F1F,UniRef:UniRef100_UPI0001DD9F1F,UniRef:UniRef50_P28008,UniRef:UniRef90_Q99SA3;ec_number=2.7.1.197
contig_1	Pyrodigal	gene	2226938	2229070	.	+	.	ID=GCA000144955_02180_gene;locus_tag=GCA000144955_02180;gene=bglG
contig_1	Pyrodigal	CDS	2226938	2229070	.	+	0	ID=GCA000144955_02180;Name=BglG family transcription antiterminator;locus_tag=GCA000144955_02180;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000144955_02180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03483,RefSeq:WP_000927344.1,SO:0001217,UniParc:UPI0001DD9F20,UniRef:UniRef100_UPI0001DD9F20,UniRef:UniRef50_A0A0D6H7E9,UniRef:UniRef90_A0A0D6H7E9
contig_1	Pyrodigal	gene	2229082	2229516	.	+	.	ID=GCA000144955_02181_gene;locus_tag=GCA000144955_02181;gene=mtlF
contig_1	Pyrodigal	CDS	2229082	2229516	.	+	0	ID=GCA000144955_02181;Name=Mannitol-specific phosphotransferase enzyme IIA component;locus_tag=GCA000144955_02181;product=Mannitol-specific phosphotransferase enzyme IIA component;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0090563;gene=mtlF;Parent=GCA000144955_02181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,RefSeq:WP_000015645.1,SO:0001217,UniParc:UPI0001DD9F21,UniRef:UniRef100_UPI0001DD9F21,UniRef:UniRef50_P17876,UniRef:UniRef90_Q5HE46
contig_1	Pyrodigal	gene	2229516	2230622	.	+	.	ID=GCA000144955_02182_gene;locus_tag=GCA000144955_02182;gene=mtlD
contig_1	Pyrodigal	CDS	2229516	2230622	.	+	0	ID=GCA000144955_02182;Name=mannitol-1-phosphate 5-dehydrogenase;locus_tag=GCA000144955_02182;product=mannitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0005829,GO:0008926,GO:0019592;gene=mtlD;Parent=GCA000144955_02182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0246,COG:G,KEGG:K00009,RefSeq:WP_000648739.1,SO:0001217,UniParc:UPI0001DD9F22,UniRef:UniRef100_UPI0001DD9F22,UniRef:UniRef50_Q2FW96,UniRef:UniRef90_Q2FW96;ec_number=1.1.1.17
contig_1	Pyrodigal	gene	2230941	2238377	.	-	.	ID=GCA000144955_02183_gene;locus_tag=GCA000144955_02183
contig_1	Pyrodigal	CDS	2230941	2238377	.	-	0	ID=GCA000144955_02183;Name=DUF1542 domain-containing protein;locus_tag=GCA000144955_02183;product=DUF1542 domain-containing protein;Parent=GCA000144955_02183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001048250.1,SO:0001217,UniParc:UPI0001DDA099,UniRef:UniRef100_UPI0001DDA099,UniRef:UniRef50_Q2FW95,UniRef:UniRef90_Q2FW95
contig_1	Pyrodigal	gene	2238655	2240010	.	-	.	ID=GCA000144955_02184_gene;locus_tag=GCA000144955_02184;gene=glmM
contig_1	Pyrodigal	CDS	2238655	2240010	.	-	0	ID=GCA000144955_02184;Name=phosphoglucosamine mutase;locus_tag=GCA000144955_02184;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252;gene=glmM;Parent=GCA000144955_02184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_000521495.1,SO:0001217,UniParc:UPI00000D77E8,UniRef:UniRef100_P65704,UniRef:UniRef50_P0C0V7,UniRef:UniRef90_P0C0V7;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	2240037	2240969	.	-	.	ID=GCA000144955_02185_gene;locus_tag=GCA000144955_02185;gene=ybbR
contig_1	Pyrodigal	CDS	2240037	2240969	.	-	0	ID=GCA000144955_02185;Name=YbbR-like domain-containing protein;locus_tag=GCA000144955_02185;product=YbbR-like domain-containing protein;gene=ybbR;Parent=GCA000144955_02185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4856,COG:T,RefSeq:WP_000894032.1,SO:0001217,UniParc:UPI0000054628,UniRef:UniRef100_Q2FW93,UniRef:UniRef50_A0A2T4S925,UniRef:UniRef90_Q2FW93
contig_1	Pyrodigal	gene	2240971	2241780	.	-	.	ID=GCA000144955_02186_gene;locus_tag=GCA000144955_02186;gene=cdaA
contig_1	Pyrodigal	CDS	2240971	2241780	.	-	0	ID=GCA000144955_02186;Name=diadenylate cyclase CdaA;locus_tag=GCA000144955_02186;product=diadenylate cyclase CdaA;Dbxref=GO:0004016,GO:0006171;gene=cdaA;Parent=GCA000144955_02186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1642,COG:T,KEGG:K18672,RefSeq:WP_000347896.1,SO:0001217,UniParc:UPI0000054629,UniRef:UniRef100_Q2FW92,UniRef:UniRef50_A0A223KXB4,UniRef:UniRef90_A0A898CM21;ec_number=2.7.7.85
contig_1	Pyrodigal	gene	2241969	2242877	.	-	.	ID=GCA000144955_02187_gene;locus_tag=GCA000144955_02187;gene=rocF
contig_1	Pyrodigal	CDS	2241969	2242877	.	-	0	ID=GCA000144955_02187;Name=arginase;locus_tag=GCA000144955_02187;product=arginase;Dbxref=GO:0000050,GO:0004053,GO:0005737,GO:0019547,GO:0030145,GO:0046872;gene=rocF;Parent=GCA000144955_02187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01476,RefSeq:WP_000167870.1,SO:0001217,UniParc:UPI0001DDA09A,UniRef:UniRef100_UPI0001DDA09A,UniRef:UniRef50_P60086,UniRef:UniRef90_P60086;ec_number=3.5.3.1
contig_1	tRNAscan-SE	gene	2243009	2243081	.	-	.	ID=GCA000144955_02188_gene;locus_tag=GCA000144955_02188;gene=trnK
contig_1	tRNAscan-SE	tRNA	2243009	2243081	.	-	.	ID=GCA000144955_02188;Name=tRNA-Lys(ttt);locus_tag=GCA000144955_02188;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000144955_02188_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	2243085	2243159	.	-	.	ID=GCA000144955_02189_gene;locus_tag=GCA000144955_02189;gene=trnQ
contig_1	tRNAscan-SE	tRNA	2243085	2243159	.	-	.	ID=GCA000144955_02189;Name=tRNA-Gln(ttg);locus_tag=GCA000144955_02189;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000144955_02189_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	2243169	2243252	.	-	.	ID=GCA000144955_02190_gene;locus_tag=GCA000144955_02190;gene=trnY
contig_1	tRNAscan-SE	tRNA	2243169	2243252	.	-	.	ID=GCA000144955_02190;Name=tRNA-Tyr(gta);locus_tag=GCA000144955_02190;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000144955_02190_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	2243282	2243357	.	-	.	ID=GCA000144955_02191_gene;locus_tag=GCA000144955_02191;gene=trnV
contig_1	tRNAscan-SE	tRNA	2243282	2243357	.	-	.	ID=GCA000144955_02191;Name=tRNA-Val(tac);locus_tag=GCA000144955_02191;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000144955_02191_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2243365	2243436	.	-	.	ID=GCA000144955_02192_gene;locus_tag=GCA000144955_02192;gene=trnE
contig_1	tRNAscan-SE	tRNA	2243365	2243436	.	-	.	ID=GCA000144955_02192;Name=tRNA-Glu(ttc);locus_tag=GCA000144955_02192;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000144955_02192_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	2243438	2243512	.	-	.	ID=GCA000144955_02193_gene;locus_tag=GCA000144955_02193;gene=trnN
contig_1	tRNAscan-SE	tRNA	2243438	2243512	.	-	.	ID=GCA000144955_02193;Name=tRNA-Asn(gtt);locus_tag=GCA000144955_02193;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000144955_02193_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Infernal	gene	2243524	2243638	.	-	.	ID=GCA000144955_02194_gene;locus_tag=GCA000144955_02194;gene=rrf
contig_1	Infernal	rRNA	2243524	2243638	1.1e-14	-	.	ID=GCA000144955_02194;Name=5S ribosomal RNA;locus_tag=GCA000144955_02194;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000144955_02194_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2243711	2246633	.	-	.	ID=GCA000144955_02195_gene;locus_tag=GCA000144955_02195;gene=rrl
contig_1	Infernal	rRNA	2243711	2246633	1.4e-06	-	.	ID=GCA000144955_02195;Name=23S ribosomal RNA;locus_tag=GCA000144955_02195;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000144955_02195_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2247182	2248733	.	-	.	ID=GCA000144955_02196_gene;locus_tag=GCA000144955_02196;gene=rrs
contig_1	Infernal	rRNA	2247182	2248733	1.3e-49	-	.	ID=GCA000144955_02196;Name=16S ribosomal RNA;locus_tag=GCA000144955_02196;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000144955_02196_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	2249191	2250255	.	-	.	ID=GCA000144955_02197_gene;locus_tag=GCA000144955_02197;gene=mrp
contig_1	Pyrodigal	CDS	2249191	2250255	.	-	0	ID=GCA000144955_02197;Name=Iron-sulfur cluster carrier protein;locus_tag=GCA000144955_02197;product=Iron-sulfur cluster carrier protein;gene=mrp;Parent=GCA000144955_02197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000958532.1,SO:0001217,UniParc:UPI0001DDA09B,UniRef:UniRef100_UPI0001DDA09B,UniRef:UniRef50_P50863,UniRef:UniRef90_A0A7U7JQN2
contig_1	Pyrodigal	gene	2250403	2251845	.	-	.	ID=GCA000144955_02198_gene;locus_tag=GCA000144955_02198;gene=lmrS
contig_1	Pyrodigal	CDS	2250403	2251845	.	-	0	ID=GCA000144955_02198;Name=multidrug efflux MFS transporter LmrS;locus_tag=GCA000144955_02198;product=multidrug efflux MFS transporter LmrS;gene=lmrS;Parent=GCA000144955_02198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001140999,COG:COG2814,COG:G,KEGG:K18934,NCBIProtein:AAW38464.1,RefSeq:WP_001141012.1,SO:0001217,UniParc:UPI0001DDA09C,UniRef:UniRef100_A0A6B5DJ54,UniRef:UniRef50_Q2FW85,UniRef:UniRef90_Q2FW85
contig_1	Pyrodigal	gene	2252307	2252774	.	-	.	ID=GCA000144955_02199_gene;locus_tag=GCA000144955_02199;gene=sepA
contig_1	Pyrodigal	CDS	2252307	2252774	.	-	0	ID=GCA000144955_02199;Name=multidrug efflux transporter SepA;locus_tag=GCA000144955_02199;product=multidrug efflux transporter SepA;Dbxref=GO:0005886;gene=sepA;Parent=GCA000144955_02199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_011382353,SO:0001217,UniRef:UniRef50_Q5HM62,UniRef:UniRef90_Q2FW84
contig_1	Pyrodigal	gene	2252879	2254222	.	-	.	ID=GCA000144955_02200_gene;locus_tag=GCA000144955_02200;gene=sdrM
contig_1	Pyrodigal	CDS	2252879	2254222	.	-	0	ID=GCA000144955_02200;Name=multidrug efflux MFS transporter SdrM;locus_tag=GCA000144955_02200;product=multidrug efflux MFS transporter SdrM;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=sdrM;Parent=GCA000144955_02200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K18935,RefSeq:WP_001237501.1,SO:0001217,UniParc:UPI0001DDA09E,UniRef:UniRef100_UPI0001DDA09E,UniRef:UniRef50_Q99S97,UniRef:UniRef90_Q99S97
contig_1	Pyrodigal	gene	2254395	2255081	.	-	.	ID=GCA000144955_02201_gene;locus_tag=GCA000144955_02201;gene=yqfA
contig_1	Pyrodigal	CDS	2254395	2255081	.	-	0	ID=GCA000144955_02201;Name=Hemolysin III;locus_tag=GCA000144955_02201;product=Hemolysin III;gene=yqfA;Parent=GCA000144955_02201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1272,COG:U,SO:0001217,UniRef:UniRef50_Q2FW82,UniRef:UniRef90_Q2FW82
contig_1	Pyrodigal	gene	2255097	2256284	.	-	.	ID=GCA000144955_02202_gene;locus_tag=GCA000144955_02202;gene=qRI1
contig_1	Pyrodigal	CDS	2255097	2256284	.	-	0	ID=GCA000144955_02202;Name=putative uridylyltransferase MW2097;locus_tag=GCA000144955_02202;product=putative uridylyltransferase MW2097;Dbxref=GO:0070569;gene=qRI1;Parent=GCA000144955_02202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4284,COG:G,KEGG:K11442,RefSeq:WP_000884735.1,SO:0001217,UniParc:UPI00000D78B0,UniRef:UniRef100_Q99S95,UniRef:UniRef50_Q2FW81,UniRef:UniRef90_Q2FW81;ec_number=2.7.7.-
contig_1	Pyrodigal	gene	2256328	2256843	.	-	.	ID=GCA000144955_02203_gene;locus_tag=GCA000144955_02203;gene=ybcI
contig_1	Pyrodigal	CDS	2256328	2256843	.	-	0	ID=GCA000144955_02203;Name=Metal-dependent hydrolase;locus_tag=GCA000144955_02203;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000144955_02203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000147094.1,SO:0001217,UniParc:UPI0000054BDC,UniRef:UniRef100_Q2FW80,UniRef:UniRef50_Q2FW80,UniRef:UniRef90_Q2FW80
contig_1	Pyrodigal	gene	2257020	2257280	.	+	.	ID=GCA000144955_02204_gene;locus_tag=GCA000144955_02204
contig_1	Pyrodigal	CDS	2257020	2257280	.	+	0	ID=GCA000144955_02204;Name=UPF0457 protein SAR2264;locus_tag=GCA000144955_02204;product=UPF0457 protein SAR2264;Parent=GCA000144955_02204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251935.1,SO:0001217,UniParc:UPI0000054BDD,UniRef:UniRef100_Q2FW79,UniRef:UniRef50_Q2FW79,UniRef:UniRef90_Q2FW79
contig_1	Pyrodigal	gene	2257412	2258782	.	-	.	ID=GCA000144955_02205_gene;locus_tag=GCA000144955_02205;gene=spoVV
contig_1	Pyrodigal	CDS	2257412	2258782	.	-	0	ID=GCA000144955_02205;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000144955_02205;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000144955_02205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,RefSeq:WP_014532784.1,SO:0001217,UniParc:UPI0001DDA0A0,UniRef:UniRef100_UPI0001DDA0A0,UniRef:UniRef50_B9DM72,UniRef:UniRef90_A0A7U7PWQ6
contig_1	Pyrodigal	gene	2259017	2259985	.	-	.	ID=GCA000144955_02206_gene;locus_tag=GCA000144955_02206;gene=fepD
contig_1	Pyrodigal	CDS	2259017	2259985	.	-	0	ID=GCA000144955_02206;Name=Heme ABC type transporter HtsABC%2C permease protein HtsC;locus_tag=GCA000144955_02206;product=Heme ABC type transporter HtsABC%2C permease protein HtsC;gene=fepD;Parent=GCA000144955_02206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000988000.1,SO:0001217,UniParc:UPI0001DDA0A1,UniRef:UniRef100_UPI0001DDA0A1,UniRef:UniRef50_A0A2K4AJP4,UniRef:UniRef90_A0A2K4AJP4
contig_1	Pyrodigal	gene	2259982	2261013	.	-	.	ID=GCA000144955_02207_gene;locus_tag=GCA000144955_02207;gene=fepD
contig_1	Pyrodigal	CDS	2259982	2261013	.	-	0	ID=GCA000144955_02207;Name=Iron-dicitrate ABC transporter (Permease);locus_tag=GCA000144955_02207;product=Iron-dicitrate ABC transporter (Permease);gene=fepD;Parent=GCA000144955_02207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000985689.1,SO:0001217,UniParc:UPI0001DDA0A2,UniRef:UniRef100_UPI0001DDA0A2,UniRef:UniRef50_A0A380G4K5,UniRef:UniRef90_A0A0U1MRT1
contig_1	Pyrodigal	gene	2261025	2262008	.	-	.	ID=GCA000144955_02208_gene;locus_tag=GCA000144955_02208;gene=fecB
contig_1	Pyrodigal	CDS	2261025	2262008	.	-	0	ID=GCA000144955_02208;Name=Iron-dicitrate ABC transporter (Binding lipoprotein);locus_tag=GCA000144955_02208;product=Iron-dicitrate ABC transporter (Binding lipoprotein);gene=fecB;Parent=GCA000144955_02208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,KEGG:K23181,RefSeq:WP_001214648.1,SO:0001217,UniParc:UPI0001DDA0A3,UniRef:UniRef100_UPI0001DDA0A3,UniRef:UniRef50_S2Y8V6,UniRef:UniRef90_A0A0U1MR80
contig_1	Pyrodigal	gene	2262401	2263471	.	-	.	ID=GCA000144955_02209_gene;locus_tag=GCA000144955_02209;gene=sfaC
contig_1	Pyrodigal	CDS	2262401	2263471	.	-	0	ID=GCA000144955_02209;Name=staphyloferrin A biosynthesis protein SfaC;locus_tag=GCA000144955_02209;product=staphyloferrin A biosynthesis protein SfaC;gene=sfaC;Parent=GCA000144955_02209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000951636,COG:COG3457,COG:E,KEGG:K21898,RefSeq:WP_000951641.1,SO:0001217,UniParc:UPI0001DDA0A4,UniRef:UniRef100_UPI0001DDA0A4,UniRef:UniRef50_Q2FW73,UniRef:UniRef90_Q2FW73;ec_number=5.1.1.12
contig_1	Pyrodigal	gene	2263478	2265235	.	-	.	ID=GCA000144955_02210_gene;locus_tag=GCA000144955_02210;gene=sfaB
contig_1	Pyrodigal	CDS	2263478	2265235	.	-	0	ID=GCA000144955_02210;Name=staphyloferrin A synthetase SfaB;locus_tag=GCA000144955_02210;product=staphyloferrin A synthetase SfaB;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaB;Parent=GCA000144955_02210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000262640,COG:COG4264,COG:P,KEGG:K23447,RefSeq:WP_000262643.1,SO:0001217,UniParc:UPI0001DDA0A5,UniRef:UniRef100_UPI0001DDA0A5,UniRef:UniRef50_Q2FW72,UniRef:UniRef90_Q2FW72;ec_number=6.3.2.57
contig_1	Pyrodigal	gene	2265222	2266415	.	-	.	ID=GCA000144955_02211_gene;locus_tag=GCA000144955_02211;gene=sfaA
contig_1	Pyrodigal	CDS	2265222	2266415	.	-	0	ID=GCA000144955_02211;Name=staphyloferrin A export MFS transporter;locus_tag=GCA000144955_02211;product=staphyloferrin A export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sfaA;Parent=GCA000144955_02211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000170403,KEGG:K23448,RefSeq:WP_000170406.1,SO:0001217,UniParc:UPI0001DDA0A6,UniRef:UniRef100_UPI0001DDA0A6,UniRef:UniRef50_Q2FW71,UniRef:UniRef90_Q2FW71
contig_1	Pyrodigal	gene	2266517	2268493	.	+	.	ID=GCA000144955_02212_gene;locus_tag=GCA000144955_02212;gene=sfaD
contig_1	Pyrodigal	CDS	2266517	2268493	.	+	0	ID=GCA000144955_02212;Name=D-ornithine--citrate ligase SfaD;locus_tag=GCA000144955_02212;product=D-ornithine--citrate ligase SfaD;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaD;Parent=GCA000144955_02212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001052566,COG:COG4264,COG:P,KEGG:K23446,RefSeq:WP_001052550.1,SO:0001217,UniParc:UPI0002D2BC51,UniRef:UniRef100_UPI0002D2BC51,UniRef:UniRef50_Q2FW70,UniRef:UniRef90_Q2FW70;ec_number=6.3.2.58
contig_1	Pyrodigal	gene	2268653	2269162	.	-	.	ID=GCA000144955_02213_gene;locus_tag=GCA000144955_02213;gene=asp23
contig_1	Pyrodigal	CDS	2268653	2269162	.	-	0	ID=GCA000144955_02213;Name=Alkaline shock protein 23;locus_tag=GCA000144955_02213;product=Alkaline shock protein 23;gene=asp23;Parent=GCA000144955_02213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000215236.1,SO:0001217,UniParc:UPI0000054BEA,UniRef:UniRef100_Q2FW66,UniRef:UniRef50_Q2FW66,UniRef:UniRef90_Q2FW66
contig_1	Pyrodigal	gene	2269226	2269465	.	-	.	ID=GCA000144955_02214_gene;locus_tag=GCA000144955_02214
contig_1	Pyrodigal	CDS	2269226	2269465	.	-	0	ID=GCA000144955_02214;Name=DUF2273 domain-containing protein;locus_tag=GCA000144955_02214;product=DUF2273 domain-containing protein;Parent=GCA000144955_02214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5547,COG:S,RefSeq:WP_000002683.1,SO:0001217,UniParc:UPI0000054BEB,UniRef:UniRef100_Q2FW65,UniRef:UniRef50_Q2FW65,UniRef:UniRef90_Q2FW65
contig_1	Pyrodigal	gene	2269478	2270014	.	-	.	ID=GCA000144955_02215_gene;locus_tag=GCA000144955_02215;gene=amaP
contig_1	Pyrodigal	CDS	2269478	2270014	.	-	0	ID=GCA000144955_02215;Name=alkaline shock response membrane anchor protein AmaP;locus_tag=GCA000144955_02215;product=alkaline shock response membrane anchor protein AmaP;gene=amaP;Parent=GCA000144955_02215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825819.1,SO:0001217,UniParc:UPI00000D7671,UniRef:UniRef100_Q2FW64,UniRef:UniRef50_Q2FW64,UniRef:UniRef90_Q2FW64
contig_1	Pyrodigal	gene	2270189	2271751	.	-	.	ID=GCA000144955_02216_gene;locus_tag=GCA000144955_02216;gene=betT
contig_1	Pyrodigal	CDS	2270189	2271751	.	-	0	ID=GCA000144955_02216;Name=BCCT family transporter;locus_tag=GCA000144955_02216;product=BCCT family transporter;gene=betT;Parent=GCA000144955_02216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000792335.1,SO:0001217,UniParc:UPI0001DDA0A8,UniRef:UniRef100_UPI0001DDA0A8,UniRef:UniRef50_A0A9X4QYP5,UniRef:UniRef90_Q7BJZ6
contig_1	Pyrodigal	gene	2272059	2273066	.	-	.	ID=GCA000144955_02217_gene;locus_tag=GCA000144955_02217;gene=qor
contig_1	Pyrodigal	CDS	2272059	2273066	.	-	0	ID=GCA000144955_02217;Name=Zinc-type alcohol dehydrogenase-like protein MW2112;locus_tag=GCA000144955_02217;product=Zinc-type alcohol dehydrogenase-like protein MW2112;Dbxref=GO:0008270,GO:0016491;gene=qor;Parent=GCA000144955_02217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000781944.1,SO:0001217,UniParc:UPI0001DDA0A9,UniRef:UniRef100_UPI0001DDA0A9,UniRef:UniRef50_Q5HM44,UniRef:UniRef90_P63475
contig_1	Pyrodigal	gene	2273300	2274304	.	-	.	ID=GCA000144955_02218_gene;locus_tag=GCA000144955_02218;gene=curA
contig_1	Pyrodigal	CDS	2273300	2274304	.	-	0	ID=GCA000144955_02218;Name=Quinone oxidoreductase;locus_tag=GCA000144955_02218;product=Quinone oxidoreductase;gene=curA;Parent=GCA000144955_02218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2130,COG:QR,SO:0001217,UniRef:UniRef50_A0A1H5ZK44,UniRef:UniRef90_A0A7I8NIX0
contig_1	Pyrodigal	gene	2274580	2275449	.	-	.	ID=GCA000144955_02219_gene;locus_tag=GCA000144955_02219
contig_1	Pyrodigal	CDS	2274580	2275449	.	-	0	ID=GCA000144955_02219;Name=Alpha/beta hydrolase;locus_tag=GCA000144955_02219;product=Alpha/beta hydrolase;Parent=GCA000144955_02219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4814,COG:S,RefSeq:WP_000719329.1,SO:0001217,UniParc:UPI00000D7704,UniRef:UniRef100_A0A2Y1M5T3,UniRef:UniRef50_Q2G2D6,UniRef:UniRef90_Q2G2D6
contig_1	Pyrodigal	gene	2275711	2277123	.	-	.	ID=GCA000144955_02220_gene;locus_tag=GCA000144955_02220;gene=lacG
contig_1	Pyrodigal	CDS	2275711	2277123	.	-	0	ID=GCA000144955_02220;Name=6-phospho-beta-galactosidase;locus_tag=GCA000144955_02220;product=6-phospho-beta-galactosidase;Dbxref=GO:0005829,GO:0008422,GO:0019512,GO:0033920;gene=lacG;Parent=GCA000144955_02220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000169211.1,SO:0001217,UniParc:UPI0001DDA0AB,UniRef:UniRef100_UPI0001DDA0AB,UniRef:UniRef50_C7N8L9,UniRef:UniRef90_Q2G2D5;ec_number=3.2.1.85
contig_1	Pyrodigal	gene	2277141	2278853	.	-	.	ID=GCA000144955_02221_gene;locus_tag=GCA000144955_02221;gene=lacE
contig_1	Pyrodigal	CDS	2277141	2278853	.	-	0	ID=GCA000144955_02221;Name=lactose-specific PTS transporter subunit EIIC;locus_tag=GCA000144955_02221;product=lactose-specific PTS transporter subunit EIIC;Dbxref=GO:0005886,GO:0009401,GO:0015155,GO:0016020,GO:0016301,GO:0019197,GO:0022869,GO:1901264;gene=lacE;Parent=GCA000144955_02221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1455,COG:G,KEGG:K02788,RefSeq:WP_000983330.1,SO:0001217,UniParc:UPI00000D772D,UniRef:UniRef100_Q5HE15,UniRef:UniRef50_P11162,UniRef:UniRef90_P11162;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2278859	2279170	.	-	.	ID=GCA000144955_02222_gene;locus_tag=GCA000144955_02222;gene=lacF
contig_1	Pyrodigal	CDS	2278859	2279170	.	-	0	ID=GCA000144955_02222;Name=PTS system lactose-specific EIIA component;locus_tag=GCA000144955_02222;product=PTS system lactose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016740,GO:0046872;gene=lacF;Parent=GCA000144955_02222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1447,COG:G,KEGG:K02786,RefSeq:WP_001078309.1,SO:0001217,UniParc:UPI0000054BF4,UniRef:UniRef100_Q5HE14,UniRef:UniRef50_P23532,UniRef:UniRef90_Q5HE14;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2279192	2280172	.	-	.	ID=GCA000144955_02223_gene;locus_tag=GCA000144955_02223;gene=lacD
contig_1	Pyrodigal	CDS	2279192	2280172	.	-	0	ID=GCA000144955_02223;Name=tagatose-bisphosphate aldolase;locus_tag=GCA000144955_02223;product=tagatose-bisphosphate aldolase;Dbxref=GO:0009024,GO:0009025,GO:0019512,GO:0061595,GO:1902777,GO:2001059;gene=lacD;Parent=GCA000144955_02223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3684,COG:GP,KEGG:K01635,RefSeq:WP_000047009.1,SO:0001217,UniParc:UPI0000054BF5,UniRef:UniRef100_P0A011,UniRef:UniRef50_P26593,UniRef:UniRef90_P0A011;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	2280176	2281108	.	-	.	ID=GCA000144955_02224_gene;locus_tag=GCA000144955_02224;gene=lacC
contig_1	Pyrodigal	CDS	2280176	2281108	.	-	0	ID=GCA000144955_02224;Name=tagatose-6-phosphate kinase;locus_tag=GCA000144955_02224;product=tagatose-6-phosphate kinase;Dbxref=GO:0005524,GO:0005829,GO:0008443,GO:0009024,GO:0019512,GO:2001059;gene=lacC;Parent=GCA000144955_02224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00917,RefSeq:WP_000604139.1,SO:0001217,UniParc:UPI0001DDA249,UniRef:UniRef100_UPI0001DDA249,UniRef:UniRef50_P0A0B9,UniRef:UniRef90_P0A0B9;ec_number=2.7.1.144
contig_1	Pyrodigal	gene	2281121	2281636	.	-	.	ID=GCA000144955_02225_gene;locus_tag=GCA000144955_02225;gene=lacB
contig_1	Pyrodigal	CDS	2281121	2281636	.	-	0	ID=GCA000144955_02225;Name=galactose-6-phosphate isomerase subunit LacB;locus_tag=GCA000144955_02225;product=galactose-6-phosphate isomerase subunit LacB;Dbxref=GO:0004751,GO:0009052,GO:0016861,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacB;Parent=GCA000144955_02225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,RefSeq:WP_000684746.1,SO:0001217,UniParc:UPI0000054BF7,UniRef:UniRef100_Q2G2R0,UniRef:UniRef50_P23495,UniRef:UniRef90_Q2G2R0;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2281652	2282080	.	-	.	ID=GCA000144955_02226_gene;locus_tag=GCA000144955_02226;gene=lacA
contig_1	Pyrodigal	CDS	2281652	2282080	.	-	0	ID=GCA000144955_02226;Name=galactose-6-phosphate isomerase subunit LacA;locus_tag=GCA000144955_02226;product=galactose-6-phosphate isomerase subunit LacA;Dbxref=GO:0004751,GO:0009052,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacA;Parent=GCA000144955_02226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,KEGG:K01819,RefSeq:WP_000974609.1,SO:0001217,UniParc:UPI0001DDA24A,UniRef:UniRef100_UPI0001DDA24A,UniRef:UniRef50_Q2G2R4,UniRef:UniRef90_Q2G2R4;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2282448	2283203	.	-	.	ID=GCA000144955_02227_gene;locus_tag=GCA000144955_02227;gene=lacR
contig_1	Pyrodigal	CDS	2282448	2283203	.	-	0	ID=GCA000144955_02227;Name=Lactose phosphotransferase system repressor;locus_tag=GCA000144955_02227;product=Lactose phosphotransferase system repressor;Dbxref=GO:0003677,GO:0003700,GO:0005988;gene=lacR;Parent=GCA000144955_02227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02530,RefSeq:WP_001032743.1,SO:0001217,UniParc:UPI00003B1895,UniRef:UniRef100_Q6GEN3,UniRef:UniRef50_P0A0Q0,UniRef:UniRef90_P0A0Q0
contig_1	Pyrodigal	gene	2283470	2284186	.	+	.	ID=GCA000144955_02228_gene;locus_tag=GCA000144955_02228;gene=cobB
contig_1	Pyrodigal	CDS	2283470	2284186	.	+	0	ID=GCA000144955_02228;Name=NAD-dependent protein deacylase;locus_tag=GCA000144955_02228;product=NAD-dependent protein deacylase;Dbxref=GO:0005737,GO:0008270,GO:0032041,GO:0034979,GO:0046969,GO:0046970,GO:0051287,GO:0070403,GO:0097372,GO:0140765,GO:0141222;gene=cobB;Parent=GCA000144955_02228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,SO:0001217,UniRef:UniRef50_P66815,UniRef:UniRef90_P66815;ec_number=2.3.1.286
contig_1	Pyrodigal	gene	2284658	2285353	.	-	.	ID=GCA000144955_02229_gene;locus_tag=GCA000144955_02229
contig_1	Pyrodigal	CDS	2284658	2285353	.	-	0	ID=GCA000144955_02229;Name=Subtilase family protease;locus_tag=GCA000144955_02229;product=Subtilase family protease;Parent=GCA000144955_02229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000703668.1,SO:0001217,UniParc:UPI0001DDA24C,UniRef:UniRef100_A0A7U7JQY2,UniRef:UniRef50_A0A7U7JQY2,UniRef:UniRef90_A0A7U7JQY2
contig_1	Pyrodigal	gene	2285340	2285948	.	-	.	ID=GCA000144955_02230_gene;locus_tag=GCA000144955_02230
contig_1	Pyrodigal	CDS	2285340	2285948	.	-	0	ID=GCA000144955_02230;Name=DUF3885 domain-containing protein;locus_tag=GCA000144955_02230;product=DUF3885 domain-containing protein;Parent=GCA000144955_02230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000006843.1,SO:0001217,UniParc:UPI0001DDA24D,UniRef:UniRef100_UPI0001DDA24D,UniRef:UniRef50_Q2FW59,UniRef:UniRef90_Q2FW59
contig_1	Pyrodigal	gene	2285962	2286711	.	-	.	ID=GCA000144955_02231_gene;locus_tag=GCA000144955_02231
contig_1	Pyrodigal	CDS	2285962	2286711	.	-	0	ID=GCA000144955_02231;Name=SAR2788 family putative toxin;locus_tag=GCA000144955_02231;product=SAR2788 family putative toxin;Parent=GCA000144955_02231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669339.1,SO:0001217,UniParc:UPI0001DDA24E,UniRef:UniRef100_UPI0001DDA24E,UniRef:UniRef50_A0A9X1EFU1,UniRef:UniRef90_A0A7U7PWL7
contig_1	Pyrodigal	gene	2286797	2286928	.	-	.	ID=GCA000144955_02232_gene;locus_tag=GCA000144955_02232
contig_1	Pyrodigal	CDS	2286797	2286928	.	-	0	ID=GCA000144955_02232;Name=Doubtful CDS No database matches;locus_tag=GCA000144955_02232;product=Doubtful CDS No database matches;Parent=GCA000144955_02232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031787975.1,SO:0001217,UniParc:UPI000319E230,UniRef:UniRef100_A0A7U7PWI6,UniRef:UniRef50_Q2FW58,UniRef:UniRef90_A0A7U7PWI6
contig_1	Pyrodigal	gene	2287148	2287996	.	-	.	ID=GCA000144955_02233_gene;locus_tag=GCA000144955_02233;gene=aRA1
contig_1	Pyrodigal	CDS	2287148	2287996	.	-	0	ID=GCA000144955_02233;Name=Aldo/keto reductase;locus_tag=GCA000144955_02233;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000144955_02233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_001015511.1,SO:0001217,UniParc:UPI0001DDA24F,UniRef:UniRef100_UPI0001DDA24F,UniRef:UniRef50_A0A0U1MRZ3,UniRef:UniRef90_A0A0U1MRZ3
contig_1	Pyrodigal	gene	2288066	2288482	.	-	.	ID=GCA000144955_02234_gene;locus_tag=GCA000144955_02234;gene=soxR
contig_1	Pyrodigal	CDS	2288066	2288482	.	-	0	ID=GCA000144955_02234;Name=MerR family transcriptional regulator;locus_tag=GCA000144955_02234;product=MerR family transcriptional regulator;gene=soxR;Parent=GCA000144955_02234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000850007.1,SO:0001217,UniParc:UPI0001DDA250,UniRef:UniRef100_A0AAE8P8G5,UniRef:UniRef50_R2R848,UniRef:UniRef90_A0A390R2I5
contig_1	Pyrodigal	gene	2288891	2291308	.	+	.	ID=GCA000144955_02235_gene;locus_tag=GCA000144955_02235
contig_1	Pyrodigal	CDS	2288891	2291308	.	+	0	ID=GCA000144955_02235;Name=polysaccharide lyase 8 family protein;locus_tag=GCA000144955_02235;product=polysaccharide lyase 8 family protein;Parent=GCA000144955_02235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01727,RefSeq:WP_000222263.1,SO:0001217,UniParc:UPI0001DDA251,UniRef:UniRef100_UPI0001DDA251,UniRef:UniRef50_Q59801,UniRef:UniRef90_UPI0001DDA251;ec_number=4.2.2.1
contig_1	Pyrodigal	gene	2291482	2292411	.	-	.	ID=GCA000144955_02236_gene;locus_tag=GCA000144955_02236
contig_1	Pyrodigal	CDS	2291482	2292411	.	-	0	ID=GCA000144955_02236;Name=WYL domain-containing protein;locus_tag=GCA000144955_02236;product=WYL domain-containing protein;Parent=GCA000144955_02236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000703973.1,SO:0001217,UniParc:UPI0001DDA252,UniRef:UniRef100_UPI0001DDA252,UniRef:UniRef50_A0A7U7JQW8,UniRef:UniRef90_A0A6B1RQU8
contig_1	Pyrodigal	gene	2292503	2293138	.	+	.	ID=GCA000144955_02237_gene;locus_tag=GCA000144955_02237;gene=yoaZ
contig_1	Pyrodigal	CDS	2292503	2293138	.	+	0	ID=GCA000144955_02237;Name=putative protease YoaZ;locus_tag=GCA000144955_02237;product=putative protease YoaZ;gene=yoaZ;Parent=GCA000144955_02237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000800348.1,SO:0001217,UniParc:UPI0001DDA253,UniRef:UniRef100_UPI0001DDA253,UniRef:UniRef50_A0A136WCL7,UniRef:UniRef90_A0A7U7JQR2
contig_1	Pyrodigal	gene	2293327	2293752	.	+	.	ID=GCA000144955_02238_gene;locus_tag=GCA000144955_02238
contig_1	Pyrodigal	CDS	2293327	2293752	.	+	0	ID=GCA000144955_02238;Name=MAP domain-containing protein;locus_tag=GCA000144955_02238;product=MAP domain-containing protein;Parent=GCA000144955_02238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044026013.1,SO:0001217,UniParc:UPI0001DDA254,UniRef:UniRef100_UPI0001DDA254,UniRef:UniRef50_A0A7U7JQY5,UniRef:UniRef90_A0A7U7JQY5
contig_1	Pyrodigal	gene	2294121	2294825	.	-	.	ID=GCA000144955_02239_gene;locus_tag=GCA000144955_02239;gene=budA
contig_1	Pyrodigal	CDS	2294121	2294825	.	-	0	ID=GCA000144955_02239;Name=acetolactate decarboxylase;locus_tag=GCA000144955_02239;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000144955_02239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,RefSeq:WP_000024500.1,SO:0001217,UniParc:UPI0001DDA255,UniRef:UniRef100_UPI0001DDA255,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MRE6;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2294862	2296526	.	-	.	ID=GCA000144955_02240_gene;locus_tag=GCA000144955_02240;gene=alsS
contig_1	Pyrodigal	CDS	2294862	2296526	.	-	0	ID=GCA000144955_02240;Name=acetolactate synthase AlsS;locus_tag=GCA000144955_02240;product=acetolactate synthase AlsS;Dbxref=GO:0000287,GO:0003984,GO:0030976,GO:0034077;gene=alsS;Parent=GCA000144955_02240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,RefSeq:WP_000130135.1,SO:0001217,UniParc:UPI0001DDA256,UniRef:UniRef100_UPI0001DDA256,UniRef:UniRef50_A0A0U1MRE5,UniRef:UniRef90_A0A0D6WCP3;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2297484	2298749	.	-	.	ID=GCA000144955_02241_gene;locus_tag=GCA000144955_02241;gene=ltrA
contig_1	Pyrodigal	CDS	2297484	2298749	.	-	0	ID=GCA000144955_02241;Name=group II intron reverse transcriptase/maturase;locus_tag=GCA000144955_02241;product=group II intron reverse transcriptase/maturase;Dbxref=GO:0000373,GO:0003964;gene=ltrA;Parent=GCA000144955_02241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00986,SO:0001217,UniRef:UniRef50_A0A8G2HZ16,UniRef:UniRef90_A0A8G2HZ16;ec_number=2.7.7.49
contig_1	Pyrodigal	gene	2299567	2301861	.	-	.	ID=GCA000144955_02242_gene;locus_tag=GCA000144955_02242
contig_1	Pyrodigal	CDS	2299567	2301861	.	-	0	ID=GCA000144955_02242;Name=AAA family ATPase;locus_tag=GCA000144955_02242;product=AAA family ATPase;Parent=GCA000144955_02242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000176941.1,SO:0001217,UniParc:UPI0001DDA259,UniRef:UniRef100_UPI0001DDA259,UniRef:UniRef50_UPI002DBBD03F,UniRef:UniRef90_UPI002DBBD03F
contig_1	Pyrodigal	gene	2302240	2302407	.	+	.	ID=GCA000144955_02243_gene;locus_tag=GCA000144955_02243
contig_1	Pyrodigal	CDS	2302240	2302407	.	+	0	ID=GCA000144955_02243;Name=hypothetical protein;locus_tag=GCA000144955_02243;product=hypothetical protein;Parent=GCA000144955_02243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001149890.1,SO:0001217,UniParc:UPI0001DDA25A,UniRef:UniRef100_UPI0001DDA25A,UniRef:UniRef50_A0A380DSC4,UniRef:UniRef90_A0A380DSC4
contig_1	Pyrodigal	gene	2302476	2302874	.	-	.	ID=GCA000144955_02244_gene;locus_tag=GCA000144955_02244;gene=rpsI
contig_1	Pyrodigal	CDS	2302476	2302874	.	-	0	ID=GCA000144955_02244;Name=30S ribosomal protein S9;locus_tag=GCA000144955_02244;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA000144955_02244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_000170975.1,SO:0001217,UniParc:UPI0000048023,UniRef:UniRef100_Q2FW39,UniRef:UniRef50_Q2FW39,UniRef:UniRef90_Q2FW39
contig_1	Pyrodigal	gene	2302888	2303325	.	-	.	ID=GCA000144955_02245_gene;locus_tag=GCA000144955_02245;gene=rplM
contig_1	Pyrodigal	CDS	2302888	2303325	.	-	0	ID=GCA000144955_02245;Name=50S ribosomal protein L13;locus_tag=GCA000144955_02245;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA000144955_02245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,KEGG:K02871,RefSeq:WP_001250038.1,SO:0001217,UniParc:UPI0000054B7F,UniRef:UniRef100_Q2FW38,UniRef:UniRef50_Q2FW38,UniRef:UniRef90_Q2FW38
contig_1	Infernal	regulatory_region	2303453	2303522	3.1e-09	-	.	ID=BPGLLONNDN_180;Name=Ribosomal protein L13 leader;product=Ribosomal protein L13 leader;Dbxref=RFAM:RF00555;inference=profile:Rfam:RF00555;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2303565	2304368	.	-	.	ID=GCA000144955_02246_gene;locus_tag=GCA000144955_02246;gene=truA
contig_1	Pyrodigal	CDS	2303565	2304368	.	-	0	ID=GCA000144955_02246;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000144955_02246;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000144955_02246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0101,COG:J,KEGG:K06173,RefSeq:WP_001221858.1,SO:0001217,UniParc:UPI0001DDA25B,UniRef:UniRef100_UPI0001DDA25B,UniRef:UniRef50_Q2FW37,UniRef:UniRef90_Q2FW37;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	2304373	2305179	.	-	.	ID=GCA000144955_02247_gene;locus_tag=GCA000144955_02247;gene=ecfT
contig_1	Pyrodigal	CDS	2304373	2305179	.	-	0	ID=GCA000144955_02247;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000144955_02247;product=Energy-coupling factor transporter transmembrane protein EcfT;Dbxref=GO:0005886,GO:0022857;gene=ecfT;Parent=GCA000144955_02247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000791617.1,SO:0001217,UniParc:UPI00005FE71E,UniRef:UniRef100_A0A0D1FU36,UniRef:UniRef50_D3ERJ1,UniRef:UniRef90_D3ERJ1
contig_1	Pyrodigal	gene	2305169	2306029	.	-	.	ID=GCA000144955_02248_gene;locus_tag=GCA000144955_02248;gene=ecfA2
contig_1	Pyrodigal	CDS	2305169	2306029	.	-	0	ID=GCA000144955_02248;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000144955_02248;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000144955_02248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000155455.1,SO:0001217,UniParc:UPI0001DDA25C,UniRef:UniRef100_UPI0001DDA25C,UniRef:UniRef50_Q2FW35,UniRef:UniRef90_Q2FW35;ec_number=3.6.3.-
contig_1	Pyrodigal	gene	2306026	2306835	.	-	.	ID=GCA000144955_02249_gene;locus_tag=GCA000144955_02249;gene=ecfA1
contig_1	Pyrodigal	CDS	2306026	2306835	.	-	0	ID=GCA000144955_02249;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000144955_02249;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA1;Parent=GCA000144955_02249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000389666.1,SO:0001217,UniParc:UPI0001DDA25D,UniRef:UniRef100_UPI0001DDA25D,UniRef:UniRef50_Q2YYM4,UniRef:UniRef90_Q2YYM4;ec_number=7.-.-.-
contig_1	Infernal	gene	2307184	2307247	.	-	.	ID=GCA000144955_02250_gene;locus_tag=GCA000144955_02250;gene=sau-30
contig_1	Infernal	ncRNA	2307184	2307247	6.3e-16	-	.	ID=GCA000144955_02250;Name=Staphylococcus sRNA sau-30;locus_tag=GCA000144955_02250;product=Staphylococcus sRNA sau-30;Dbxref=RFAM:RF02388;Parent=GCA000144955_02250_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02388
contig_1	Pyrodigal	gene	2307373	2307741	.	-	.	ID=GCA000144955_02251_gene;locus_tag=GCA000144955_02251;gene=rplQ
contig_1	Pyrodigal	CDS	2307373	2307741	.	-	0	ID=GCA000144955_02251;Name=50S ribosomal protein L17;locus_tag=GCA000144955_02251;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA000144955_02251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,RefSeq:WP_000542274.1,SO:0001217,UniParc:UPI0000054BB3,UniRef:UniRef100_Q2FW33,UniRef:UniRef50_P20277,UniRef:UniRef90_Q2FW33
contig_1	Pyrodigal	gene	2307758	2308702	.	-	.	ID=GCA000144955_02252_gene;locus_tag=GCA000144955_02252;gene=rpoA
contig_1	Pyrodigal	CDS	2307758	2308702	.	-	0	ID=GCA000144955_02252;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000144955_02252;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA000144955_02252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_000569649.1,SO:0001217,UniParc:UPI0000054BBD,UniRef:UniRef100_Q2FW32,UniRef:UniRef50_Q2FW32,UniRef:UniRef90_Q2FW32;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2308777	2309166	.	-	.	ID=GCA000144955_02253_gene;locus_tag=GCA000144955_02253;gene=rpsK
contig_1	Pyrodigal	CDS	2308777	2309166	.	-	0	ID=GCA000144955_02253;Name=30S ribosomal protein S11;locus_tag=GCA000144955_02253;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000144955_02253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_000101625.1,SO:0001217,UniParc:UPI0000048025,UniRef:UniRef100_Q2FW31,UniRef:UniRef50_Q6N4V6,UniRef:UniRef90_B9E9L6
contig_1	Pyrodigal	gene	2309190	2309555	.	-	.	ID=GCA000144955_02254_gene;locus_tag=GCA000144955_02254;gene=rpsM
contig_1	Pyrodigal	CDS	2309190	2309555	.	-	0	ID=GCA000144955_02254;Name=30S ribosomal protein S13;locus_tag=GCA000144955_02254;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000144955_02254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_000090796.1,SO:0001217,UniParc:UPI0000048027,UniRef:UniRef100_Q2FW30,UniRef:UniRef50_P20282,UniRef:UniRef90_Q2FW30
contig_1	Pyrodigal	gene	2309578	2309691	.	-	.	ID=GCA000144955_02255_gene;locus_tag=GCA000144955_02255;gene=rpmJ
contig_1	Pyrodigal	CDS	2309578	2309691	.	-	0	ID=GCA000144955_02255;Name=50S ribosomal protein L36;locus_tag=GCA000144955_02255;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA000144955_02255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_000868342.1,SO:0001217,UniParc:UPI0000054BDA,UniRef:UniRef100_Q2FW29,UniRef:UniRef50_P07841,UniRef:UniRef90_P07841
contig_1	Pyrodigal	gene	2309723	2309941	.	-	.	ID=GCA000144955_02256_gene;locus_tag=GCA000144955_02256;gene=infA
contig_1	Pyrodigal	CDS	2309723	2309941	.	-	0	ID=GCA000144955_02256;Name=translation initiation factor IF-1;locus_tag=GCA000144955_02256;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000144955_02256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_001118443.1,SO:0001217,UniParc:UPI0000054BE5,UniRef:UniRef100_Q2FW28,UniRef:UniRef50_P0A3K4,UniRef:UniRef90_Q2FW28
contig_1	Pyrodigal	gene	2310134	2310781	.	-	.	ID=GCA000144955_02257_gene;locus_tag=GCA000144955_02257;gene=adk
contig_1	Pyrodigal	CDS	2310134	2310781	.	-	0	ID=GCA000144955_02257;Name=adenylate kinase;locus_tag=GCA000144955_02257;product=adenylate kinase;Dbxref=GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0008270,GO:0016776,GO:0019205,GO:0044209;gene=adk;Parent=GCA000144955_02257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0563,COG:F,RefSeq:WP_001021468.1,SO:0001217,UniParc:UPI000012DBE8,UniRef:UniRef100_Q5HDX9,UniRef:UniRef50_B2A4G2,UniRef:UniRef90_Q5HM20;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	2310798	2312090	.	-	.	ID=GCA000144955_02258_gene;locus_tag=GCA000144955_02258;gene=secY
contig_1	Pyrodigal	CDS	2310798	2312090	.	-	0	ID=GCA000144955_02258;Name=preprotein translocase subunit SecY;locus_tag=GCA000144955_02258;product=preprotein translocase subunit SecY;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0016020,GO:0043952,GO:0065002;gene=secY;Parent=GCA000144955_02258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000616784.1,SO:0001217,UniParc:UPI0000054BFA,UniRef:UniRef100_O08387,UniRef:UniRef50_O08387,UniRef:UniRef90_O08387
contig_1	Pyrodigal	gene	2312090	2312530	.	-	.	ID=GCA000144955_02259_gene;locus_tag=GCA000144955_02259;gene=rplO
contig_1	Pyrodigal	CDS	2312090	2312530	.	-	0	ID=GCA000144955_02259;Name=50S ribosomal protein L15;locus_tag=GCA000144955_02259;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000144955_02259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,KEGG:K02876,RefSeq:WP_000766074.1,SO:0001217,UniParc:UPI0000054C04,UniRef:UniRef100_P0A0F8,UniRef:UniRef50_Q5M2D2,UniRef:UniRef90_P0A0F8
contig_1	Pyrodigal	gene	2312547	2312726	.	-	.	ID=GCA000144955_02260_gene;locus_tag=GCA000144955_02260;gene=rpmD
contig_1	Pyrodigal	CDS	2312547	2312726	.	-	0	ID=GCA000144955_02260;Name=50S ribosomal protein L30;locus_tag=GCA000144955_02260;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000144955_02260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1841,COG:J,RefSeq:WP_001096577.1,SO:0001217,UniParc:UPI0000054C0F,UniRef:UniRef100_P0A0G2,UniRef:UniRef50_P0A0G2,UniRef:UniRef90_P0A0G2
contig_1	Pyrodigal	gene	2312743	2313243	.	-	.	ID=GCA000144955_02261_gene;locus_tag=GCA000144955_02261;gene=rpsE
contig_1	Pyrodigal	CDS	2312743	2313243	.	-	0	ID=GCA000144955_02261;Name=30S ribosomal protein S5;locus_tag=GCA000144955_02261;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000144955_02261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_000113851.1,SO:0001217,UniParc:UPI0000048021,UniRef:UniRef100_Q2FW23,UniRef:UniRef50_P21467,UniRef:UniRef90_B9DM30
contig_1	Pyrodigal	gene	2313264	2313623	.	-	.	ID=GCA000144955_02262_gene;locus_tag=GCA000144955_02262;gene=rplR
contig_1	Pyrodigal	CDS	2313264	2313623	.	-	0	ID=GCA000144955_02262;Name=50S ribosomal protein L18;locus_tag=GCA000144955_02262;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000144955_02262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_000623881.1,SO:0001217,UniParc:UPI0000054C23,UniRef:UniRef100_Q2FW22,UniRef:UniRef50_Q2FW22,UniRef:UniRef90_Q2FW22
contig_1	Pyrodigal	gene	2313654	2314190	.	-	.	ID=GCA000144955_02263_gene;locus_tag=GCA000144955_02263;gene=rplF
contig_1	Pyrodigal	CDS	2313654	2314190	.	-	0	ID=GCA000144955_02263;Name=50S ribosomal protein L6;locus_tag=GCA000144955_02263;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000144955_02263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_000091975.1,SO:0001217,UniParc:UPI0000054C2C,UniRef:UniRef100_Q2FW21,UniRef:UniRef50_B1XJJ3,UniRef:UniRef90_Q2FW21
contig_1	Pyrodigal	gene	2314215	2314613	.	-	.	ID=GCA000144955_02264_gene;locus_tag=GCA000144955_02264;gene=rpsH
contig_1	Pyrodigal	CDS	2314215	2314613	.	-	0	ID=GCA000144955_02264;Name=30S ribosomal protein S8;locus_tag=GCA000144955_02264;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA000144955_02264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_000178881.1,SO:0001217,UniParc:UPI000004801B,UniRef:UniRef100_Q2FW20,UniRef:UniRef50_P12879,UniRef:UniRef90_B9DM33
contig_1	Pyrodigal	gene	2314645	2314830	.	-	.	ID=GCA000144955_02265_gene;locus_tag=GCA000144955_02265;gene=rpsZ
contig_1	Pyrodigal	CDS	2314645	2314830	.	-	0	ID=GCA000144955_02265;Name=type Z 30S ribosomal protein S14;locus_tag=GCA000144955_02265;product=type Z 30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008270,GO:0015935,GO:0019843;gene=rpsZ;Parent=GCA000144955_02265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_001140799.1,SO:0001217,UniParc:UPI0000048028,UniRef:UniRef100_Q2FW19,UniRef:UniRef50_P12878,UniRef:UniRef90_Q2FW19
contig_1	Pyrodigal	gene	2314853	2315392	.	-	.	ID=GCA000144955_02266_gene;locus_tag=GCA000144955_02266;gene=rplE
contig_1	Pyrodigal	CDS	2314853	2315392	.	-	0	ID=GCA000144955_02266;Name=50S ribosomal protein L5;locus_tag=GCA000144955_02266;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000144955_02266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_001080824.1,SO:0001217,UniParc:UPI00000D76D0,UniRef:UniRef100_Q2FW18,UniRef:UniRef50_Q6N4U5,UniRef:UniRef90_Q2FW18
contig_1	Pyrodigal	gene	2315419	2315736	.	-	.	ID=GCA000144955_02267_gene;locus_tag=GCA000144955_02267;gene=rplX
contig_1	Pyrodigal	CDS	2315419	2315736	.	-	0	ID=GCA000144955_02267;Name=50S ribosomal protein L24;locus_tag=GCA000144955_02267;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplX;Parent=GCA000144955_02267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_000547687.1,SO:0001217,UniParc:UPI0000054C5E,UniRef:UniRef100_Q2FW17,UniRef:UniRef50_P0CI78,UniRef:UniRef90_Q49ZF7
contig_1	Pyrodigal	gene	2315772	2316140	.	-	.	ID=GCA000144955_02268_gene;locus_tag=GCA000144955_02268;gene=rplN
contig_1	Pyrodigal	CDS	2315772	2316140	.	-	0	ID=GCA000144955_02268;Name=50S ribosomal protein L14;locus_tag=GCA000144955_02268;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000144955_02268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,RefSeq:WP_000615921.1,SO:0001217,UniParc:UPI0000054C69,UniRef:UniRef100_Q2FW16,UniRef:UniRef50_B2LMN0,UniRef:UniRef90_Q927L7
contig_1	Pyrodigal	gene	2316172	2316435	.	-	.	ID=GCA000144955_02269_gene;locus_tag=GCA000144955_02269;gene=rpsQ
contig_1	Pyrodigal	CDS	2316172	2316435	.	-	0	ID=GCA000144955_02269;Name=30S ribosomal protein S17;locus_tag=GCA000144955_02269;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000144955_02269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_000004086.1,SO:0001217,UniParc:UPI000004801D,UniRef:UniRef100_Q2FW15,UniRef:UniRef50_P12874,UniRef:UniRef90_Q2FW15
contig_1	Pyrodigal	gene	2316459	2316668	.	-	.	ID=GCA000144955_02270_gene;locus_tag=GCA000144955_02270;gene=rpmC
contig_1	Pyrodigal	CDS	2316459	2316668	.	-	0	ID=GCA000144955_02270;Name=50S ribosomal protein L29;locus_tag=GCA000144955_02270;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000144955_02270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0255,COG:J,RefSeq:WP_000644737.1,SO:0001217,UniParc:UPI0000133E90,UniRef:UniRef100_Q2FW14,UniRef:UniRef50_Q2FW14,UniRef:UniRef90_Q2FW14
contig_1	Pyrodigal	gene	2316658	2317092	.	-	.	ID=GCA000144955_02271_gene;locus_tag=GCA000144955_02271;gene=rplP
contig_1	Pyrodigal	CDS	2316658	2317092	.	-	0	ID=GCA000144955_02271;Name=50S ribosomal protein L16;locus_tag=GCA000144955_02271;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000144955_02271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,RefSeq:WP_000926310.1,SO:0001217,UniParc:UPI00000D76A9,UniRef:UniRef100_Q2FW13,UniRef:UniRef50_Q2FW13,UniRef:UniRef90_Q2FW13
contig_1	Pyrodigal	gene	2317095	2317748	.	-	.	ID=GCA000144955_02272_gene;locus_tag=GCA000144955_02272;gene=rpsC
contig_1	Pyrodigal	CDS	2317095	2317748	.	-	0	ID=GCA000144955_02272;Name=30S ribosomal protein S3;locus_tag=GCA000144955_02272;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000144955_02272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_000529877.1,SO:0001217,UniParc:UPI0000134FAF,UniRef:UniRef100_Q2FW12,UniRef:UniRef50_P23309,UniRef:UniRef90_Q2FW12
contig_1	Pyrodigal	gene	2317772	2318125	.	-	.	ID=GCA000144955_02273_gene;locus_tag=GCA000144955_02273;gene=rplV
contig_1	Pyrodigal	CDS	2317772	2318125	.	-	0	ID=GCA000144955_02273;Name=50S ribosomal protein L22;locus_tag=GCA000144955_02273;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000144955_02273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_000387527.1,SO:0001217,UniParc:UPI0000054ADA,UniRef:UniRef100_Q2FW11,UniRef:UniRef50_Q2FW11,UniRef:UniRef90_Q2FW11
contig_1	Pyrodigal	gene	2318154	2318432	.	-	.	ID=GCA000144955_02274_gene;locus_tag=GCA000144955_02274;gene=rpsS
contig_1	Pyrodigal	CDS	2318154	2318432	.	-	0	ID=GCA000144955_02274;Name=30S ribosomal protein S19;locus_tag=GCA000144955_02274;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000144955_02274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_000124353.1,SO:0001217,UniParc:UPI000004802B,UniRef:UniRef100_Q2FW10,UniRef:UniRef50_Q49ZG4,UniRef:UniRef90_Q49ZG4
contig_1	Pyrodigal	gene	2318499	2319332	.	-	.	ID=GCA000144955_02275_gene;locus_tag=GCA000144955_02275;gene=rplB
contig_1	Pyrodigal	CDS	2318499	2319332	.	-	0	ID=GCA000144955_02275;Name=50S ribosomal protein L2;locus_tag=GCA000144955_02275;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000144955_02275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,KEGG:K02886,RefSeq:WP_000985472.1,SO:0001217,UniParc:UPI00000522A9,UniRef:UniRef100_P60430,UniRef:UniRef50_A1BJ31,UniRef:UniRef90_P60430
contig_1	Pyrodigal	gene	2319365	2319640	.	-	.	ID=GCA000144955_02276_gene;locus_tag=GCA000144955_02276;gene=rplW
contig_1	Pyrodigal	CDS	2319365	2319640	.	-	0	ID=GCA000144955_02276;Name=50S ribosomal protein L23;locus_tag=GCA000144955_02276;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA000144955_02276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_000388082.1,SO:0001217,UniParc:UPI00000549A8,UniRef:UniRef100_Q2FW08,UniRef:UniRef50_A0QSD3,UniRef:UniRef90_B9DM17
contig_1	Pyrodigal	gene	2319640	2320263	.	-	.	ID=GCA000144955_02277_gene;locus_tag=GCA000144955_02277;gene=rplD
contig_1	Pyrodigal	CDS	2319640	2320263	.	-	0	ID=GCA000144955_02277;Name=50S ribosomal protein L4;locus_tag=GCA000144955_02277;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000144955_02277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_000024827.1,SO:0001217,UniParc:UPI00000545D9,UniRef:UniRef100_Q2FW07,UniRef:UniRef50_P42921,UniRef:UniRef90_Q49ZG7
contig_1	Pyrodigal	gene	2320290	2320952	.	-	.	ID=GCA000144955_02278_gene;locus_tag=GCA000144955_02278;gene=rplC
contig_1	Pyrodigal	CDS	2320290	2320952	.	-	0	ID=GCA000144955_02278;Name=50S ribosomal protein L3 RplC;locus_tag=GCA000144955_02278;product=50S ribosomal protein L3 RplC;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000144955_02278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,KEGG:K02906,RefSeq:WP_000160212.1,SO:0001217,UniParc:UPI00000D76AA,UniRef:UniRef100_Q2FW06,UniRef:UniRef50_Q2FW06,UniRef:UniRef90_Q2FW06
contig_1	Pyrodigal	gene	2320980	2321288	.	-	.	ID=GCA000144955_02279_gene;locus_tag=GCA000144955_02279;gene=rpsJ_Y58D
contig_1	Pyrodigal	CDS	2320980	2321288	.	-	0	ID=GCA000144955_02279;Name=30S ribosomal protein S10;locus_tag=GCA000144955_02279;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ_Y58D;Parent=GCA000144955_02279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001118667.1,SO:0001217,UniParc:UPI0000048024,UniRef:UniRef100_Q5HLZ8,UniRef:UniRef50_P0A7R5,UniRef:UniRef90_B9E9J0
contig_1	Pyrodigal	gene	2321645	2322034	.	+	.	ID=GCA000144955_02280_gene;locus_tag=GCA000144955_02280
contig_1	Pyrodigal	CDS	2321645	2322034	.	+	0	ID=GCA000144955_02280;Name=Integral membrane protein;locus_tag=GCA000144955_02280;product=Integral membrane protein;Parent=GCA000144955_02280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000788443.1,SO:0001217,UniParc:UPI00000CAA87,UniRef:UniRef100_Q2FW05,UniRef:UniRef50_Q2FW05,UniRef:UniRef90_Q2FW05
contig_1	Pyrodigal	gene	2322226	2323560	.	-	.	ID=GCA000144955_02281_gene;locus_tag=GCA000144955_02281;gene=nCS2
contig_1	Pyrodigal	CDS	2322226	2323560	.	-	0	ID=GCA000144955_02281;Name=NCS2 family permease;locus_tag=GCA000144955_02281;product=NCS2 family permease;gene=nCS2;Parent=GCA000144955_02281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_000800700.1,SO:0001217,UniParc:UPI00000D7655,UniRef:UniRef100_Q2FW04,UniRef:UniRef50_O34987,UniRef:UniRef90_Q2FW04
contig_1	Pyrodigal	gene	2323673	2325808	.	-	.	ID=GCA000144955_02282_gene;locus_tag=GCA000144955_02282;gene=topB
contig_1	Pyrodigal	CDS	2323673	2325808	.	-	0	ID=GCA000144955_02282;Name=DNA topoisomerase 3;locus_tag=GCA000144955_02282;product=DNA topoisomerase 3;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0006265,GO:0006281,GO:0006310,GO:0043597;gene=topB;Parent=GCA000144955_02282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_000838475.1,SO:0001217,UniParc:UPI0001DDA3F0,UniRef:UniRef100_UPI0001DDA3F0,UniRef:UniRef50_P0C2W6,UniRef:UniRef90_P0C2W6;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	2325995	2326882	.	+	.	ID=GCA000144955_02283_gene;locus_tag=GCA000144955_02283
contig_1	Pyrodigal	CDS	2325995	2326882	.	+	0	ID=GCA000144955_02283;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02283;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_02283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000029540.1,SO:0001217,UniParc:UPI0001DDA3F1,UniRef:UniRef100_UPI0001DDA3F1,UniRef:UniRef50_Q2FW01,UniRef:UniRef90_Q2FW01
contig_1	Pyrodigal	gene	2327063	2327926	.	+	.	ID=GCA000144955_02284_gene;locus_tag=GCA000144955_02284;gene=glcU
contig_1	Pyrodigal	CDS	2327063	2327926	.	+	0	ID=GCA000144955_02284;Name=putative glucose uptake protein GlcU;locus_tag=GCA000144955_02284;product=putative glucose uptake protein GlcU;Dbxref=GO:0005886,GO:0015144;gene=glcU;Parent=GCA000144955_02284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4975,COG:G,KEGG:K05340,RefSeq:WP_001159898.1,SO:0001217,UniParc:UPI00000D76E6,UniRef:UniRef100_Q5HDV2,UniRef:UniRef50_O07881,UniRef:UniRef90_Q6GEH7
contig_1	Pyrodigal	gene	2328345	2329253	.	-	.	ID=GCA000144955_02285_gene;locus_tag=GCA000144955_02285;gene=yfdV
contig_1	Pyrodigal	CDS	2328345	2329253	.	-	0	ID=GCA000144955_02285;Name=AEC family transporter;locus_tag=GCA000144955_02285;product=AEC family transporter;gene=yfdV;Parent=GCA000144955_02285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0679,COG:R,RefSeq:WP_000139197.1,SO:0001217,UniParc:UPI0001DDA3F2,UniRef:UniRef100_A0A0S2J8I2,UniRef:UniRef50_Q2FVZ8,UniRef:UniRef90_Q2FVZ8
contig_1	Pyrodigal	gene	2329386	2329550	.	+	.	ID=GCA000144955_02286_gene;locus_tag=GCA000144955_02286
contig_1	Pyrodigal	CDS	2329386	2329550	.	+	0	ID=GCA000144955_02286;Name=SE1832 family protein;locus_tag=GCA000144955_02286;product=SE1832 family protein;Parent=GCA000144955_02286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000051208.1,SO:0001217,UniParc:UPI0001DDA3F3,UniRef:UniRef100_UPI0001DDA3F3,UniRef:UniRef50_Q2FVZ7,UniRef:UniRef90_Q2FVZ7
contig_1	Pyrodigal	gene	2329795	2330112	.	+	.	ID=GCA000144955_02287_gene;locus_tag=GCA000144955_02287;gene=mspA
contig_1	Pyrodigal	CDS	2329795	2330112	.	+	0	ID=GCA000144955_02287;Name=membrane stabilizing protein MspA;locus_tag=GCA000144955_02287;product=membrane stabilizing protein MspA;Dbxref=GO:0016020;gene=mspA;Parent=GCA000144955_02287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001161084.1,SO:0001217,UniParc:UPI0001DDA3F4,UniRef:UniRef100_UPI0001DDA3F4,UniRef:UniRef50_Q2FVZ6,UniRef:UniRef90_Q2FVZ6
contig_1	Pyrodigal	gene	2330299	2333463	.	-	.	ID=GCA000144955_02288_gene;locus_tag=GCA000144955_02288;gene=acrB
contig_1	Pyrodigal	CDS	2330299	2333463	.	-	0	ID=GCA000144955_02288;Name=Efflux RND transporter permease subunit;locus_tag=GCA000144955_02288;product=Efflux RND transporter permease subunit;gene=acrB;Parent=GCA000144955_02288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_000592299.1,SO:0001217,UniParc:UPI0001DDA3F5,UniRef:UniRef100_UPI0001DDA3F5,UniRef:UniRef50_Q2FVZ5,UniRef:UniRef90_Q2FVZ5
contig_1	Pyrodigal	gene	2333580	2334845	.	-	.	ID=GCA000144955_02289_gene;locus_tag=GCA000144955_02289;gene=femX
contig_1	Pyrodigal	CDS	2333580	2334845	.	-	0	ID=GCA000144955_02289;Name=lipid II:glycine glycyltransferase;locus_tag=GCA000144955_02289;product=lipid II:glycine glycyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femX;Parent=GCA000144955_02289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413865,COG:COG2348,COG:M,KEGG:K11693,RefSeq:WP_000413859.1,SO:0001217,UniParc:UPI0001DDA3F6,UniRef:UniRef100_UPI0001DDA3F6,UniRef:UniRef50_Q2FVZ4,UniRef:UniRef90_Q2FVZ4;ec_number=2.3.2.16
contig_1	Pyrodigal	gene	2335234	2335485	.	+	.	ID=GCA000144955_02290_gene;locus_tag=GCA000144955_02290
contig_1	Pyrodigal	CDS	2335234	2335485	.	+	0	ID=GCA000144955_02290;Name=Membrane protein;locus_tag=GCA000144955_02290;product=Membrane protein;Parent=GCA000144955_02290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001566779.1,SO:0001217,UniParc:UPI00000D9F63,UniRef:UniRef100_A0A2P7CQ36,UniRef:UniRef50_Q2FVZ3,UniRef:UniRef90_Q2FVZ3
contig_1	Pyrodigal	gene	2335477	2336247	.	-	.	ID=GCA000144955_02291_gene;locus_tag=GCA000144955_02291
contig_1	Pyrodigal	CDS	2335477	2336247	.	-	0	ID=GCA000144955_02291;Name=Glyoxalase-like domain-containing protein;locus_tag=GCA000144955_02291;product=Glyoxalase-like domain-containing protein;Parent=GCA000144955_02291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000600963.1,SO:0001217,UniParc:UPI0001DDA3F7,UniRef:UniRef100_UPI0001DDA3F7,UniRef:UniRef50_Q2FVZ2,UniRef:UniRef90_Q2FVZ2
contig_1	Pyrodigal	gene	2336410	2336850	.	+	.	ID=GCA000144955_02292_gene;locus_tag=GCA000144955_02292;gene=marR
contig_1	Pyrodigal	CDS	2336410	2336850	.	+	0	ID=GCA000144955_02292;Name=putative HTH-type transcriptional regulator SA2060;locus_tag=GCA000144955_02292;product=putative HTH-type transcriptional regulator SA2060;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=marR;Parent=GCA000144955_02292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000951068.1,SO:0001217,UniParc:UPI0001DDA3F8,UniRef:UniRef100_UPI0001DDA3F8,UniRef:UniRef50_Q6GEG9,UniRef:UniRef90_Q6GEG9
contig_1	Pyrodigal	gene	2336843	2338054	.	+	.	ID=GCA000144955_02293_gene;locus_tag=GCA000144955_02293;gene=araJ
contig_1	Pyrodigal	CDS	2336843	2338054	.	+	0	ID=GCA000144955_02293;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_02293;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000144955_02293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000609829.1,SO:0001217,UniParc:UPI0001DDA3F9,UniRef:UniRef100_UPI0001DDA3F9,UniRef:UniRef50_Q2FVZ0,UniRef:UniRef90_Q2FVZ0
contig_1	Pyrodigal	gene	2338156	2338506	.	-	.	ID=GCA000144955_02294_gene;locus_tag=GCA000144955_02294;gene=sarV
contig_1	Pyrodigal	CDS	2338156	2338506	.	-	0	ID=GCA000144955_02294;Name=HTH-type transcriptional regulator SarV;locus_tag=GCA000144955_02294;product=HTH-type transcriptional regulator SarV;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarV;Parent=GCA000144955_02294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066900,COG:COG1846,COG:K,RefSeq:WP_000066900.1,SO:0001217,UniParc:UPI0000054708,UniRef:UniRef100_Q2FVY9,UniRef:UniRef50_Q2FVY9,UniRef:UniRef90_Q2FVY9
contig_1	Infernal	gene	2338759	2339033	.	+	.	ID=GCA000144955_02295_gene;locus_tag=GCA000144955_02295;gene=S35
contig_1	Infernal	ncRNA	2338759	2339033	1.3e-19	+	.	ID=GCA000144955_02295;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02295;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02295_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2339255	2340277	.	-	.	ID=GCA000144955_02296_gene;locus_tag=GCA000144955_02296;gene=moaA
contig_1	Pyrodigal	CDS	2339255	2340277	.	-	0	ID=GCA000144955_02296;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000144955_02296;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000144955_02296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044026022.1,SO:0001217,UniParc:UPI000314C3B4,UniRef:UniRef100_UPI000314C3B4,UniRef:UniRef50_Q49ZI6,UniRef:UniRef90_Q931G4;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	2340297	2340896	.	-	.	ID=GCA000144955_02297_gene;locus_tag=GCA000144955_02297;gene=mobA
contig_1	Pyrodigal	CDS	2340297	2340896	.	-	0	ID=GCA000144955_02297;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA000144955_02297;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0005525,GO:0005737,GO:0006777,GO:0046872,GO:0061603;gene=mobA;Parent=GCA000144955_02297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_000643988.1,SO:0001217,UniParc:UPI0000054733,UniRef:UniRef100_Q2FVY4,UniRef:UniRef50_Q5HLY0,UniRef:UniRef90_Q2FVY4;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	2340903	2341136	.	-	.	ID=GCA000144955_02298_gene;locus_tag=GCA000144955_02298;gene=moaD
contig_1	Pyrodigal	CDS	2340903	2341136	.	-	0	ID=GCA000144955_02298;Name=molybdopterin converting factor subunit 1;locus_tag=GCA000144955_02298;product=molybdopterin converting factor subunit 1;Dbxref=GO:0000166,GO:0003824,GO:0006777,GO:1990133;gene=moaD;Parent=GCA000144955_02298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_000866967.1,SO:0001217,UniParc:UPI0001DA21E2,UniRef:UniRef100_A0A2S6D0C1,UniRef:UniRef50_Q7A441,UniRef:UniRef90_Q7A441
contig_1	Pyrodigal	gene	2341142	2341588	.	-	.	ID=GCA000144955_02299_gene;locus_tag=GCA000144955_02299;gene=moaE
contig_1	Pyrodigal	CDS	2341142	2341588	.	-	0	ID=GCA000144955_02299;Name=Molybdopterin synthase catalytic subunit;locus_tag=GCA000144955_02299;product=Molybdopterin synthase catalytic subunit;Dbxref=GO:0006777,GO:0030366;gene=moaE;Parent=GCA000144955_02299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,KEGG:K03635,RefSeq:WP_000808502.1,SO:0001217,UniParc:UPI0001DDA3FB,UniRef:UniRef100_UPI0001DDA3FB,UniRef:UniRef50_Q9K8I7,UniRef:UniRef90_P65400;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	2341602	2342087	.	-	.	ID=GCA000144955_02300_gene;locus_tag=GCA000144955_02300;gene=mobB
contig_1	Pyrodigal	CDS	2341602	2342087	.	-	0	ID=GCA000144955_02300;Name=molybdopterin-guanine dinucleotide biosynthesis protein B;locus_tag=GCA000144955_02300;product=molybdopterin-guanine dinucleotide biosynthesis protein B;Dbxref=GO:0003824,GO:0005525,GO:0006777;gene=mobB;Parent=GCA000144955_02300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_000602939.1,SO:0001217,UniParc:UPI0001DDA3FC,UniRef:UniRef100_UPI0001DDA3FC,UniRef:UniRef50_A0A380H3I1,UniRef:UniRef90_A0A0U1MRQ4
contig_1	Pyrodigal	gene	2342084	2343343	.	-	.	ID=GCA000144955_02301_gene;locus_tag=GCA000144955_02301;gene=glp
contig_1	Pyrodigal	CDS	2342084	2343343	.	-	0	ID=GCA000144955_02301;Name=gephyrin-like molybdotransferase Glp;locus_tag=GCA000144955_02301;product=gephyrin-like molybdotransferase Glp;Dbxref=GO:0005829,GO:0006777,GO:0046872,GO:0061599,GO:1990586;gene=glp;Parent=GCA000144955_02301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0303,COG:H,RefSeq:WP_000259726.1,SO:0001217,UniParc:UPI0001DA21E5,UniRef:UniRef100_A0A2S6D078,UniRef:UniRef50_P65407,UniRef:UniRef90_P65407;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	2343406	2343900	.	+	.	ID=GCA000144955_02302_gene;locus_tag=GCA000144955_02302;gene=moaC
contig_1	Pyrodigal	CDS	2343406	2343900	.	+	0	ID=GCA000144955_02302;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000144955_02302;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000144955_02302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,RefSeq:WP_000134534.1,SO:0001217,UniParc:UPI00005FE735,UniRef:UniRef100_Q2YYS2,UniRef:UniRef50_Q2FVX9,UniRef:UniRef90_Q2FVX9;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	2343902	2344408	.	-	.	ID=GCA000144955_02303_gene;locus_tag=GCA000144955_02303;gene=moaB
contig_1	Pyrodigal	CDS	2343902	2344408	.	-	0	ID=GCA000144955_02303;Name=Molybdenum cofactor biosynthesis protein B;locus_tag=GCA000144955_02303;product=Molybdenum cofactor biosynthesis protein B;Dbxref=GO:0005829,GO:0006777;gene=moaB;Parent=GCA000144955_02303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_000503818.1,SO:0001217,UniParc:UPI0001DDA3FD,UniRef:UniRef100_UPI0001DDA3FD,UniRef:UniRef50_Q9ZIN3,UniRef:UniRef90_P65406
contig_1	Pyrodigal	gene	2344440	2345444	.	-	.	ID=GCA000144955_02304_gene;locus_tag=GCA000144955_02304;gene=thiF
contig_1	Pyrodigal	CDS	2344440	2345444	.	-	0	ID=GCA000144955_02304;Name=THIF-type NAD/FAD binding fold domain-containing protein;locus_tag=GCA000144955_02304;product=THIF-type NAD/FAD binding fold domain-containing protein;gene=thiF;Parent=GCA000144955_02304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_000076925.1,SO:0001217,UniParc:UPI0001DDA3FE,UniRef:UniRef100_UPI0001DDA3FE,UniRef:UniRef50_A0A380C5E9,UniRef:UniRef90_Q2FVX7
contig_1	Pyrodigal	gene	2345613	2346218	.	-	.	ID=GCA000144955_02305_gene;locus_tag=GCA000144955_02305;gene=modC
contig_1	Pyrodigal	CDS	2345613	2346218	.	-	0	ID=GCA000144955_02305;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000144955_02305;product=ATP-binding cassette domain-containing protein;gene=modC;Parent=GCA000144955_02305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_000913011.1,SO:0001217,UniParc:UPI0001DDA3FF,UniRef:UniRef100_UPI0001DDA3FF,UniRef:UniRef50_A0A380G6T3,UniRef:UniRef90_A0A390QQI7
contig_1	Pyrodigal	gene	2346219	2346890	.	-	.	ID=GCA000144955_02306_gene;locus_tag=GCA000144955_02306;gene=modB
contig_1	Pyrodigal	CDS	2346219	2346890	.	-	0	ID=GCA000144955_02306;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000144955_02306;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015412,GO:0015689,GO:0055052;gene=modB;Parent=GCA000144955_02306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_001113093.1,SO:0001217,UniParc:UPI0000054798,UniRef:UniRef100_Q2FVX5,UniRef:UniRef50_A0AAJ4SFQ7,UniRef:UniRef90_A0A0E8HNL7
contig_1	Pyrodigal	gene	2346904	2347686	.	-	.	ID=GCA000144955_02307_gene;locus_tag=GCA000144955_02307;gene=modA
contig_1	Pyrodigal	CDS	2346904	2347686	.	-	0	ID=GCA000144955_02307;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000144955_02307;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015412,GO:0015689,GO:0030288,GO:0030973,GO:0055052;gene=modA;Parent=GCA000144955_02307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_000782743.1,SO:0001217,UniParc:UPI0001DDA400,UniRef:UniRef100_UPI0001DDA400,UniRef:UniRef50_Q4L8E3,UniRef:UniRef90_A0A0U1MSA4
contig_1	Pyrodigal	gene	2347976	2348773	.	+	.	ID=GCA000144955_02308_gene;locus_tag=GCA000144955_02308;gene=fdhD
contig_1	Pyrodigal	CDS	2347976	2348773	.	+	0	ID=GCA000144955_02308;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000144955_02308;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0009061,GO:0009326,GO:0015942,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000144955_02308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_001030823.1,SO:0001217,UniParc:UPI00000CABD0,UniRef:UniRef100_P64120,UniRef:UniRef50_P64120,UniRef:UniRef90_P64120
contig_1	Pyrodigal	gene	2348945	2349715	.	-	.	ID=GCA000144955_02309_gene;locus_tag=GCA000144955_02309
contig_1	Pyrodigal	CDS	2348945	2349715	.	-	0	ID=GCA000144955_02309;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02309;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_02309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000146742.1,SO:0001217,UniParc:UPI00005FE73C,UniRef:UniRef100_A0A6A9GS24,UniRef:UniRef50_Q2FVX2,UniRef:UniRef90_Q2FVX2
contig_1	Pyrodigal	gene	2349787	2350341	.	-	.	ID=GCA000144955_02310_gene;locus_tag=GCA000144955_02310;gene=bioY
contig_1	Pyrodigal	CDS	2349787	2350341	.	-	0	ID=GCA000144955_02310;Name=Biotin transporter;locus_tag=GCA000144955_02310;product=Biotin transporter;gene=bioY;Parent=GCA000144955_02310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1268,COG:H,KEGG:K03523,RefSeq:WP_000208737.1,SO:0001217,UniParc:UPI00000D9F6B,UniRef:UniRef100_A0AAE8PAL9,UniRef:UniRef50_A0A0E7RMI7,UniRef:UniRef90_A0A0E7RMI7
contig_1	Pyrodigal	gene	2350462	2351403	.	-	.	ID=GCA000144955_02311_gene;locus_tag=GCA000144955_02311;gene=uRH1
contig_1	Pyrodigal	CDS	2350462	2351403	.	-	0	ID=GCA000144955_02311;Name=Purine nucleosidase;locus_tag=GCA000144955_02311;product=Purine nucleosidase;gene=uRH1;Parent=GCA000144955_02311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000592958.1,SO:0001217,UniParc:UPI0001DDA401,UniRef:UniRef100_UPI0001DDA401,UniRef:UniRef50_A0A2S6DCG5,UniRef:UniRef90_A0A2S6DCG5
contig_1	Pyrodigal	gene	2351804	2352712	.	-	.	ID=GCA000144955_02312_gene;locus_tag=GCA000144955_02312;gene=fepB
contig_1	Pyrodigal	CDS	2351804	2352712	.	-	0	ID=GCA000144955_02312;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000144955_02312;product=Fe/B12 periplasmic-binding domain-containing protein;gene=fepB;Parent=GCA000144955_02312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000735038.1,SO:0001217,UniParc:UPI00000547D7,UniRef:UniRef100_Q2FVW9,UniRef:UniRef50_A0A0S4MA85,UniRef:UniRef90_Q2FVW9
contig_1	Pyrodigal	gene	2352927	2354081	.	-	.	ID=GCA000144955_02313_gene;locus_tag=GCA000144955_02313;gene=caiA
contig_1	Pyrodigal	CDS	2352927	2354081	.	-	0	ID=GCA000144955_02313;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000144955_02313;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000144955_02313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000999185.1,SO:0001217,UniParc:UPI0001DDA402,UniRef:UniRef100_UPI0001DDA402,UniRef:UniRef50_A0A380FY69,UniRef:UniRef90_A0A380DW78
contig_1	Pyrodigal	gene	2354298	2355203	.	-	.	ID=GCA000144955_02314_gene;locus_tag=GCA000144955_02314;gene=yut
contig_1	Pyrodigal	CDS	2354298	2355203	.	-	0	ID=GCA000144955_02314;Name=urea transporter;locus_tag=GCA000144955_02314;product=urea transporter;Dbxref=GO:0015204,GO:0015840,GO:0016020;gene=yut;Parent=GCA000144955_02314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4413,COG:E,RefSeq:WP_014532786.1,SO:0001217,UniParc:UPI0001DDA59A,UniRef:UniRef100_UPI0001DDA59A,UniRef:UniRef50_A0A0H3KEG3,UniRef:UniRef90_A0A0H3KEG3
contig_1	Pyrodigal	gene	2355463	2355765	.	+	.	ID=GCA000144955_02315_gene;locus_tag=GCA000144955_02315;gene=ureA
contig_1	Pyrodigal	CDS	2355463	2355765	.	+	0	ID=GCA000144955_02315;Name=urease subunit gamma;locus_tag=GCA000144955_02315;product=urease subunit gamma;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0043419;gene=ureA;Parent=GCA000144955_02315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0831,COG:E,RefSeq:WP_000545928.1,SO:0001217,UniParc:UPI00000D77A0,UniRef:UniRef100_Q2FVW5,UniRef:UniRef50_Q89UG3,UniRef:UniRef90_Q2FVW5;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2355779	2356189	.	+	.	ID=GCA000144955_02316_gene;locus_tag=GCA000144955_02316;gene=ureB
contig_1	Pyrodigal	CDS	2355779	2356189	.	+	0	ID=GCA000144955_02316;Name=urease subunit beta;locus_tag=GCA000144955_02316;product=urease subunit beta;Dbxref=GO:0009039,GO:0035550,GO:0043419;gene=ureB;Parent=GCA000144955_02316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0832,COG:E,RefSeq:WP_000612135.1,SO:0001217,UniParc:UPI0001DDA59B,UniRef:UniRef100_A0A5S9C4Y2,UniRef:UniRef50_Q4A0J4,UniRef:UniRef90_Q2YYQ7;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2356186	2357901	.	+	.	ID=GCA000144955_02317_gene;locus_tag=GCA000144955_02317;gene=ureC
contig_1	Pyrodigal	CDS	2356186	2357901	.	+	0	ID=GCA000144955_02317;Name=urease subunit alpha;locus_tag=GCA000144955_02317;product=urease subunit alpha;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0019627,GO:0043419;gene=ureC;Parent=GCA000144955_02317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0804,COG:E,RefSeq:WP_000008683.1,SO:0001217,UniParc:UPI0001DDA59C,UniRef:UniRef100_UPI0001DDA59C,UniRef:UniRef50_P17086,UniRef:UniRef90_Q2G2K5;ec_number=3.5.1.5
contig_1	Infernal	gene	2356341	2356627	.	-	.	ID=GCA000144955_02318_gene;locus_tag=GCA000144955_02318;gene=5_ureB_sRNA
contig_1	Infernal	ncRNA	2356341	2356627	2.1e-10	-	.	ID=GCA000144955_02318;Name=5' ureB small RNA;locus_tag=GCA000144955_02318;product=5' ureB small RNA;Dbxref=RFAM:RF02514;Parent=GCA000144955_02318_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02514
contig_1	Pyrodigal	gene	2357914	2358366	.	+	.	ID=GCA000144955_02319_gene;locus_tag=GCA000144955_02319;gene=ureE
contig_1	Pyrodigal	CDS	2357914	2358366	.	+	0	ID=GCA000144955_02319;Name=urease accessory protein UreE;locus_tag=GCA000144955_02319;product=urease accessory protein UreE;Dbxref=GO:0005737,GO:0006457,GO:0016151,GO:0019627,GO:0051082,GO:0065003;gene=ureE;Parent=GCA000144955_02319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2371,COG:O,RefSeq:WP_000582695.1,SO:0001217,UniParc:UPI0001DDA59D,UniRef:UniRef100_A0A7U7JR86,UniRef:UniRef50_Q2G2K8,UniRef:UniRef90_Q2G2K8
contig_1	Pyrodigal	gene	2358359	2359048	.	+	.	ID=GCA000144955_02320_gene;locus_tag=GCA000144955_02320;gene=ureF
contig_1	Pyrodigal	CDS	2358359	2359048	.	+	0	ID=GCA000144955_02320;Name=Urease accessory protein UreF;locus_tag=GCA000144955_02320;product=Urease accessory protein UreF;Dbxref=GO:0005737,GO:0016151;gene=ureF;Parent=GCA000144955_02320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0830,COG:O,RefSeq:WP_000565243.1,SO:0001217,UniParc:UPI0001DDA59E,UniRef:UniRef100_UPI0001DDA59E,UniRef:UniRef50_Q2G2K7,UniRef:UniRef90_Q2G2K7
contig_1	Pyrodigal	gene	2359061	2359675	.	+	.	ID=GCA000144955_02321_gene;locus_tag=GCA000144955_02321;gene=ureG
contig_1	Pyrodigal	CDS	2359061	2359675	.	+	0	ID=GCA000144955_02321;Name=urease accessory protein UreG;locus_tag=GCA000144955_02321;product=urease accessory protein UreG;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872;gene=ureG;Parent=GCA000144955_02321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K03189,RefSeq:WP_000002967.1,SO:0001217,UniParc:UPI0001DDA59F,UniRef:UniRef100_UPI0001DDA59F,UniRef:UniRef50_P18319,UniRef:UniRef90_Q2G273
contig_1	Pyrodigal	gene	2359675	2360511	.	+	.	ID=GCA000144955_02322_gene;locus_tag=GCA000144955_02322;gene=ureD
contig_1	Pyrodigal	CDS	2359675	2360511	.	+	0	ID=GCA000144955_02322;Name=Urease accessory protein UreD;locus_tag=GCA000144955_02322;product=Urease accessory protein UreD;Dbxref=GO:0005737,GO:0016151;gene=ureD;Parent=GCA000144955_02322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0829,COG:O,RefSeq:WP_000344352.1,SO:0001217,UniParc:UPI0000054834,UniRef:UniRef100_Q2G272,UniRef:UniRef50_Q2G272,UniRef:UniRef90_Q2G272
contig_1	Infernal	gene	2360564	2360648	.	-	.	ID=GCA000144955_02323_gene;locus_tag=GCA000144955_02323;gene=tsr33
contig_1	Infernal	ncRNA	2360564	2360648	2.9e-17	-	.	ID=GCA000144955_02323;Name=S. aureus tsr33 small RNA;locus_tag=GCA000144955_02323;product=S. aureus tsr33 small RNA;Dbxref=RFAM:RF02582;Parent=GCA000144955_02323_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02582
contig_1	Pyrodigal	gene	2360700	2361047	.	-	.	ID=GCA000144955_02324_gene;locus_tag=GCA000144955_02324;gene=sarR
contig_1	Pyrodigal	CDS	2360700	2361047	.	-	0	ID=GCA000144955_02324;Name=HTH-type transcriptional regulator SarR;locus_tag=GCA000144955_02324;product=HTH-type transcriptional regulator SarR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0008643,GO:0015144,GO:0055085;gene=sarR;Parent=GCA000144955_02324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000036076,RefSeq:WP_000036076.1,SO:0001217,UniParc:UPI00000D7855,UniRef:UniRef100_Q9F0R1,UniRef:UniRef50_P0AEX9,UniRef:UniRef90_Q9F0R1;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	2361475	2361801	.	-	.	ID=GCA000144955_02325_gene;locus_tag=GCA000144955_02325
contig_1	Pyrodigal	CDS	2361475	2361801	.	-	0	ID=GCA000144955_02325;Name=YokE-like PH domain-containing protein;locus_tag=GCA000144955_02325;product=YokE-like PH domain-containing protein;Parent=GCA000144955_02325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000599589.1,SO:0001217,UniParc:UPI00000CA96E,UniRef:UniRef100_A0A0D1K1X3,UniRef:UniRef50_Q2G270,UniRef:UniRef90_Q2G270
contig_1	Pyrodigal	gene	2361984	2362607	.	-	.	ID=GCA000144955_02326_gene;locus_tag=GCA000144955_02326;gene=sarA
contig_1	Pyrodigal	CDS	2361984	2362607	.	-	0	ID=GCA000144955_02326;Name=SarA family transcriptional regulator;locus_tag=GCA000144955_02326;product=SarA family transcriptional regulator;gene=sarA;Parent=GCA000144955_02326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G2J5,UniRef:UniRef90_UPI001EFFB9AE
contig_1	Pyrodigal	gene	2362633	2364588	.	-	.	ID=GCA000144955_02327_gene;locus_tag=GCA000144955_02327;gene=araC
contig_1	Pyrodigal	CDS	2362633	2364588	.	-	0	ID=GCA000144955_02327;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000144955_02327;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000144955_02327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000131833.1,SO:0001217,UniParc:UPI0001DDA5A1,UniRef:UniRef100_UPI0001DDA5A1,UniRef:UniRef50_Q2G2J4,UniRef:UniRef90_Q2G2J4
contig_1	Pyrodigal	gene	2365197	2366006	.	+	.	ID=GCA000144955_02328_gene;locus_tag=GCA000144955_02328;gene=ssaA2
contig_1	Pyrodigal	CDS	2365197	2366006	.	+	0	ID=GCA000144955_02328;Name=Staphylococcal secretory antigen ssaA2;locus_tag=GCA000144955_02328;product=Staphylococcal secretory antigen ssaA2;Dbxref=GO:0005576;gene=ssaA2;Parent=GCA000144955_02328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000717389.1,SO:0001217,UniParc:UPI0001C0BB67,UniRef:UniRef100_A0A2S6D3A1,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2G2J2
contig_1	Pyrodigal	gene	2366452	2367831	.	-	.	ID=GCA000144955_02329_gene;locus_tag=GCA000144955_02329;gene=nhaC
contig_1	Pyrodigal	CDS	2366452	2367831	.	-	0	ID=GCA000144955_02329;Name=Na+/H+ antiporter NhaC;locus_tag=GCA000144955_02329;product=Na+/H+ antiporter NhaC;Dbxref=GO:0006814,GO:0015297,GO:0015385,GO:0016020,GO:1902600;gene=nhaC;Parent=GCA000144955_02329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K03315,SO:0001217,UniRef:UniRef50_A0A291JHU7,UniRef:UniRef90_A0A0E1XBW8
contig_1	Pyrodigal	gene	2367930	2369012	.	-	.	ID=GCA000144955_02330_gene;locus_tag=GCA000144955_02330;gene=gpsA
contig_1	Pyrodigal	CDS	2367930	2369012	.	-	0	ID=GCA000144955_02330;Name=6-phosphogluconate dehydrogenase%2C decarboxylating;locus_tag=GCA000144955_02330;product=6-phosphogluconate dehydrogenase%2C decarboxylating;gene=gpsA;Parent=GCA000144955_02330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,KEGG:K04940,RefSeq:WP_000684563.1,SO:0001217,UniParc:UPI0001DDA5A3,UniRef:UniRef100_UPI0001DDA5A3,UniRef:UniRef50_A0A7Z7QNB8,UniRef:UniRef90_A0A077UKH6;ec_number=1.5.1.28
contig_1	Pyrodigal	gene	2369263	2369685	.	+	.	ID=GCA000144955_02331_gene;locus_tag=GCA000144955_02331;gene=tic20a
contig_1	Pyrodigal	CDS	2369263	2369685	.	+	0	ID=GCA000144955_02331;Name=DUF4870 domain-containing protein;locus_tag=GCA000144955_02331;product=DUF4870 domain-containing protein;gene=tic20a;Parent=GCA000144955_02331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3296,COG:R,KEGG:K09940,RefSeq:WP_000206116.1,SO:0001217,UniParc:UPI0001DDA5A4,UniRef:UniRef100_UPI0001DDA5A4,UniRef:UniRef50_Q2G1V8,UniRef:UniRef90_Q2G1V8
contig_1	Pyrodigal	gene	2369921	2370421	.	+	.	ID=GCA000144955_02332_gene;locus_tag=GCA000144955_02332;gene=ssaA
contig_1	Pyrodigal	CDS	2369921	2370421	.	+	0	ID=GCA000144955_02332;Name=Secretory antigen SsaA;locus_tag=GCA000144955_02332;product=Secretory antigen SsaA;gene=ssaA;Parent=GCA000144955_02332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000737705.1,SO:0001217,UniParc:UPI000005434E,UniRef:UniRef100_Q2G1W1,UniRef:UniRef50_A0A2I7YA24,UniRef:UniRef90_A0A2I7YA24
contig_1	Pyrodigal	gene	2370781	2371734	.	+	.	ID=GCA000144955_02333_gene;locus_tag=GCA000144955_02333;gene=ldhA
contig_1	Pyrodigal	CDS	2370781	2371734	.	+	0	ID=GCA000144955_02333;Name=Putative 2-hydroxyacid dehydrogenase MW2224;locus_tag=GCA000144955_02333;product=Putative 2-hydroxyacid dehydrogenase MW2224;Dbxref=GO:0016616,GO:0051287;gene=ldhA;Parent=GCA000144955_02333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000417009.1,SO:0001217,UniParc:UPI0001DDA5A5,UniRef:UniRef100_UPI0001DDA5A5,UniRef:UniRef50_Q2FVW4,UniRef:UniRef90_Q2FVW4;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2371826	2372950	.	-	.	ID=GCA000144955_02334_gene;locus_tag=GCA000144955_02334;gene=ubiH
contig_1	Pyrodigal	CDS	2371826	2372950	.	-	0	ID=GCA000144955_02334;Name=Salicylate hydroxylase;locus_tag=GCA000144955_02334;product=Salicylate hydroxylase;gene=ubiH;Parent=GCA000144955_02334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_000684151.1,SO:0001217,UniParc:UPI0001DDA5A6,UniRef:UniRef100_UPI0001DDA5A6,UniRef:UniRef50_A0A380C5V0,UniRef:UniRef90_A0A2K4AFY1
contig_1	Pyrodigal	gene	2373261	2374037	.	-	.	ID=GCA000144955_02335_gene;locus_tag=GCA000144955_02335;gene=lytD
contig_1	Pyrodigal	CDS	2373261	2374037	.	-	0	ID=GCA000144955_02335;Name=Autolysin;locus_tag=GCA000144955_02335;product=Autolysin;gene=lytD;Parent=GCA000144955_02335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_000726235.1,SO:0001217,UniParc:UPI0001DDA5A7,UniRef:UniRef100_UPI0001DDA5A7,UniRef:UniRef50_A0A170I2K6,UniRef:UniRef90_A0A170I2K6
contig_1	Pyrodigal	gene	2374058	2374291	.	-	.	ID=GCA000144955_02336_gene;locus_tag=GCA000144955_02336
contig_1	Pyrodigal	CDS	2374058	2374291	.	-	0	ID=GCA000144955_02336;Name=Group-Specific protein;locus_tag=GCA000144955_02336;product=Group-Specific protein;Parent=GCA000144955_02336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000921246.1,SO:0001217,UniParc:UPI000069AB4E,UniRef:UniRef100_Q2FVW1,UniRef:UniRef50_A0A640MZA9,UniRef:UniRef90_Q2FVW1
contig_1	Pyrodigal	gene	2374586	2375059	.	-	.	ID=GCA000144955_02337_gene;locus_tag=GCA000144955_02337;gene=forE
contig_1	Pyrodigal	CDS	2374586	2375059	.	-	0	ID=GCA000144955_02337;Name=DUF1641 domain-containing protein;locus_tag=GCA000144955_02337;product=DUF1641 domain-containing protein;gene=forE;Parent=GCA000144955_02337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2427,RefSeq:WP_000840816.1,SO:0001217,UniParc:UPI0001DDA5A8,UniRef:UniRef100_UPI0001DDA5A8,UniRef:UniRef50_Q2FVW0,UniRef:UniRef90_Q2FVW0
contig_1	Pyrodigal	gene	2375059	2378013	.	-	.	ID=GCA000144955_02338_gene;locus_tag=GCA000144955_02338;gene=fdhF
contig_1	Pyrodigal	CDS	2375059	2378013	.	-	0	ID=GCA000144955_02338;Name=formate dehydrogenase subunit alpha;locus_tag=GCA000144955_02338;product=formate dehydrogenase subunit alpha;Dbxref=GO:0003954,GO:0008863,GO:0009326,GO:0015942,GO:0016020,GO:0022904,GO:0043546,GO:0046872,GO:0051537,GO:0051539;gene=fdhF;Parent=GCA000144955_02338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3383,RefSeq:WP_001155283.1,SO:0001217,UniParc:UPI0001DDA5A9,UniRef:UniRef100_A0AA40MJX3,UniRef:UniRef50_Q49ZN0,UniRef:UniRef90_Q99RW4;ec_number=1.17.1.9
contig_1	Pyrodigal	gene	2378616	2379563	.	-	.	ID=GCA000144955_02339_gene;locus_tag=GCA000144955_02339;gene=cps2a
contig_1	Pyrodigal	CDS	2378616	2379563	.	-	0	ID=GCA000144955_02339;Name=LytR family transcriptional regulator;locus_tag=GCA000144955_02339;product=LytR family transcriptional regulator;gene=cps2a;Parent=GCA000144955_02339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000831049.1,SO:0001217,UniParc:UPI0001DDA5AA,UniRef:UniRef100_UPI0001DDA5AA,UniRef:UniRef50_A0A640MZN0,UniRef:UniRef90_A0A077UH28;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2379696	2380493	.	-	.	ID=GCA000144955_02340_gene;locus_tag=GCA000144955_02340;gene=suhB
contig_1	Pyrodigal	CDS	2379696	2380493	.	-	0	ID=GCA000144955_02340;Name=Inositol monophosphatase family protein;locus_tag=GCA000144955_02340;product=Inositol monophosphatase family protein;gene=suhB;Parent=GCA000144955_02340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,RefSeq:WP_000130471.1,SO:0001217,UniParc:UPI0001DDA5AB,UniRef:UniRef100_UPI0001DDA5AB,UniRef:UniRef50_Q2FVV7,UniRef:UniRef90_Q2FVV7
contig_1	Infernal	gene	2380587	2380730	.	-	.	ID=GCA000144955_02341_gene;locus_tag=GCA000144955_02341;gene=RsaOG
contig_1	Infernal	ncRNA	2380587	2380730	7e-23	-	.	ID=GCA000144955_02341;Name=RNA S.aureus Orsay G;locus_tag=GCA000144955_02341;product=RNA S.aureus Orsay G;Dbxref=RFAM:RF01775;Parent=GCA000144955_02341_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01775
contig_1	Pyrodigal	gene	2380878	2381570	.	+	.	ID=GCA000144955_02342_gene;locus_tag=GCA000144955_02342;gene=yobV
contig_1	Pyrodigal	CDS	2380878	2381570	.	+	0	ID=GCA000144955_02342;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000144955_02342;product=HTH deoR-type domain-containing protein;gene=yobV;Parent=GCA000144955_02342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2378,COG:K,RefSeq:WP_001030125.1,SO:0001217,UniParc:UPI00000D7807,UniRef:UniRef100_Q2FVV6,UniRef:UniRef50_Q2FVV6,UniRef:UniRef90_Q2FVV6
contig_1	Infernal	gene	2381611	2381831	.	-	.	ID=GCA000144955_02343_gene;locus_tag=GCA000144955_02343;gene=tsr24
contig_1	Infernal	ncRNA	2381611	2381831	7.2e-27	-	.	ID=GCA000144955_02343;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_02343;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_02343_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2382217	2382954	.	-	.	ID=GCA000144955_02344_gene;locus_tag=GCA000144955_02344;gene=sdpB
contig_1	Pyrodigal	CDS	2382217	2382954	.	-	0	ID=GCA000144955_02344;Name=CPBP family intramembrane metalloprotease SdpB;locus_tag=GCA000144955_02344;product=CPBP family intramembrane metalloprotease SdpB;gene=sdpB;Parent=GCA000144955_02344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000426696,COG:COG1266,COG:O,RefSeq:WP_000426693.1,SO:0001217,UniParc:UPI0001DDA5AC,UniRef:UniRef100_UPI0001DDA5AC,UniRef:UniRef50_Q2FVV4,UniRef:UniRef90_Q2FVV4
contig_1	Pyrodigal	gene	2383003	2383332	.	+	.	ID=GCA000144955_02345_gene;locus_tag=GCA000144955_02345
contig_1	Pyrodigal	CDS	2383003	2383332	.	+	0	ID=GCA000144955_02345;Name=hypothetical protein;locus_tag=GCA000144955_02345;product=hypothetical protein;Parent=GCA000144955_02345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000606730.1,SO:0001217,UniParc:UPI0001DDA5AD,UniRef:UniRef100_UPI0001DDA5AD,UniRef:UniRef50_A0A6B1RKM0,UniRef:UniRef90_A0A6B1RKM0
contig_1	Pyrodigal	gene	2383777	2384649	.	+	.	ID=GCA000144955_02346_gene;locus_tag=GCA000144955_02346;gene=rpiR
contig_1	Pyrodigal	CDS	2383777	2384649	.	+	0	ID=GCA000144955_02346;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000144955_02346;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000144955_02346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000073195.1,SO:0001217,UniParc:UPI00000D7730,UniRef:UniRef100_Q2FVV2,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2FVV2
contig_1	Pyrodigal	gene	2385038	2386417	.	-	.	ID=GCA000144955_02347_gene;locus_tag=GCA000144955_02347;gene=ansP
contig_1	Pyrodigal	CDS	2385038	2386417	.	-	0	ID=GCA000144955_02347;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000144955_02347;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000144955_02347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000429669.1,SO:0001217,UniParc:UPI0001B3B191,UniRef:UniRef100_A0A0U1MSF2,UniRef:UniRef50_P27837,UniRef:UniRef90_Q2FVV1
contig_1	Pyrodigal	gene	2386697	2387053	.	+	.	ID=GCA000144955_02348_gene;locus_tag=GCA000144955_02348
contig_1	Pyrodigal	CDS	2386697	2387053	.	+	0	ID=GCA000144955_02348;Name=Group-Specific protein;locus_tag=GCA000144955_02348;product=Group-Specific protein;Parent=GCA000144955_02348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000917676.1,SO:0001217,UniParc:UPI0001DDA5AE,UniRef:UniRef100_UPI0001DDA5AE,UniRef:UniRef50_A0A640MZ73,UniRef:UniRef90_Q2FVV0
contig_1	Pyrodigal	gene	2387050	2387235	.	+	.	ID=GCA000144955_02349_gene;locus_tag=GCA000144955_02349
contig_1	Pyrodigal	CDS	2387050	2387235	.	+	0	ID=GCA000144955_02349;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000144955_02349;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000144955_02349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205307.1,SO:0001217,UniParc:UPI00000549F6,UniRef:UniRef100_Q2FVU9,UniRef:UniRef50_Q2FVU9,UniRef:UniRef90_Q2FVU9
contig_1	Pyrodigal	gene	2387331	2387519	.	-	.	ID=GCA000144955_02350_gene;locus_tag=GCA000144955_02350
contig_1	Pyrodigal	CDS	2387331	2387519	.	-	0	ID=GCA000144955_02350;Name=Haloacid dehalogenase-like hydrolase;locus_tag=GCA000144955_02350;product=Haloacid dehalogenase-like hydrolase;Parent=GCA000144955_02350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001BE5C4B,UniRef:UniRef100_Q2FVU8,UniRef:UniRef50_Q2FVU7,UniRef:UniRef90_Q2FVU8
contig_1	Pyrodigal	gene	2387533	2388168	.	-	.	ID=GCA000144955_02351_gene;locus_tag=GCA000144955_02351;gene=ycjU
contig_1	Pyrodigal	CDS	2387533	2388168	.	-	0	ID=GCA000144955_02351;Name=HAD family hydrolase;locus_tag=GCA000144955_02351;product=HAD family hydrolase;gene=ycjU;Parent=GCA000144955_02351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000285450.1,SO:0001217,UniParc:UPI00000549F8,UniRef:UniRef100_Q2FVU7,UniRef:UniRef50_Q2FVU7,UniRef:UniRef90_Q2FVU7
contig_1	Pyrodigal	gene	2388243	2389160	.	-	.	ID=GCA000144955_02352_gene;locus_tag=GCA000144955_02352;gene=yfeH
contig_1	Pyrodigal	CDS	2388243	2389160	.	-	0	ID=GCA000144955_02352;Name=Bile acid:sodium symporter family protein;locus_tag=GCA000144955_02352;product=Bile acid:sodium symporter family protein;gene=yfeH;Parent=GCA000144955_02352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0385,COG:R,KEGG:K03453,RefSeq:WP_000486808.1,SO:0001217,UniParc:UPI0001DDA5AF,UniRef:UniRef100_UPI0001DDA5AF,UniRef:UniRef50_Q2FVU6,UniRef:UniRef90_Q2FVU6
contig_1	Pyrodigal	gene	2389428	2389958	.	+	.	ID=GCA000144955_02353_gene;locus_tag=GCA000144955_02353
contig_1	Pyrodigal	CDS	2389428	2389958	.	+	0	ID=GCA000144955_02353;Name=Homing endonuclease LAGLIDADG domain-containing protein;locus_tag=GCA000144955_02353;product=Homing endonuclease LAGLIDADG domain-containing protein;Parent=GCA000144955_02353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000904065.1,SO:0001217,UniParc:UPI00000D765D,UniRef:UniRef100_Q2FVU5,UniRef:UniRef50_A0A974KZR7,UniRef:UniRef90_Q2FVU5
contig_1	Pyrodigal	gene	2390024	2391628	.	-	.	ID=GCA000144955_02354_gene;locus_tag=GCA000144955_02354;gene=ptsG2
contig_1	Pyrodigal	CDS	2390024	2391628	.	-	0	ID=GCA000144955_02354;Name=Alpha-glucoside-specific PTS transporter subunit IIBC;locus_tag=GCA000144955_02354;product=Alpha-glucoside-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000144955_02354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02750,RefSeq:WP_000991506.1,SO:0001217,UniParc:UPI0001DDA5B0,UniRef:UniRef100_A0A6B1RRF2,UniRef:UniRef50_P31452,UniRef:UniRef90_A0A2W3AI92;ec_number=2.7.1.208
contig_1	Pyrodigal	gene	2391958	2392722	.	+	.	ID=GCA000144955_02355_gene;locus_tag=GCA000144955_02355;gene=rpiR
contig_1	Pyrodigal	CDS	2391958	2392722	.	+	0	ID=GCA000144955_02355;Name=RpiR family transcriptional regulator;locus_tag=GCA000144955_02355;product=RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000144955_02355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000477991.1,SO:0001217,UniParc:UPI0001DDA5B1,UniRef:UniRef100_UPI0001DDA5B1,UniRef:UniRef50_A0A0D1GF60,UniRef:UniRef90_A0A0D1GF60
contig_1	Pyrodigal	gene	2392780	2393286	.	-	.	ID=GCA000144955_02356_gene;locus_tag=GCA000144955_02356;gene=yndB
contig_1	Pyrodigal	CDS	2392780	2393286	.	-	0	ID=GCA000144955_02356;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000144955_02356;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000144955_02356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_001051559.1,SO:0001217,UniParc:UPI0001DDA5B2,UniRef:UniRef100_UPI0001DDA5B2,UniRef:UniRef50_Q2FVU2,UniRef:UniRef90_Q2FVU2
contig_1	Pyrodigal	gene	2393453	2394766	.	-	.	ID=GCA000144955_02357_gene;locus_tag=GCA000144955_02357;gene=nhaC
contig_1	Pyrodigal	CDS	2393453	2394766	.	-	0	ID=GCA000144955_02357;Name=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;locus_tag=GCA000144955_02357;product=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;gene=nhaC;Parent=GCA000144955_02357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,RefSeq:WP_000451828.1,SO:0001217,UniParc:UPI0001BAF74C,UniRef:UniRef100_A0A0H3JVQ0,UniRef:UniRef50_G5JKB9,UniRef:UniRef90_G5JKB9
contig_1	Infernal	regulatory_region	2394843	2394938	2.5e-14	-	.	ID=BPGLLONNDN_167;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2395417	2395560	.	-	.	ID=GCA000144955_02358_gene;locus_tag=GCA000144955_02358;pseudogene=unitary
contig_1	Pyrodigal	CDS	2395417	2395560	.	-	0	ID=GCA000144955_02358;Name=Membrane spanning protein;locus_tag=GCA000144955_02358;product=Membrane spanning protein;pseudogene=unitary;Parent=GCA000144955_02358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X2JRW7,UniRef:UniRef90_A0A2X2JRW7
contig_1	Pyrodigal	gene	2396047	2396928	.	-	.	ID=GCA000144955_02359_gene;locus_tag=GCA000144955_02359;gene=fabG
contig_1	Pyrodigal	CDS	2396047	2396928	.	-	0	ID=GCA000144955_02359;Name=SDR family oxidoreductase;locus_tag=GCA000144955_02359;product=SDR family oxidoreductase;gene=fabG;Parent=GCA000144955_02359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000235287.1,SO:0001217,UniParc:UPI0001DDA5B4,UniRef:UniRef100_UPI0001DDA5B4,UniRef:UniRef50_D5DPI1,UniRef:UniRef90_Q2FVT8
contig_1	Pyrodigal	gene	2397039	2398160	.	-	.	ID=GCA000144955_02360_gene;locus_tag=GCA000144955_02360;gene=abgB
contig_1	Pyrodigal	CDS	2397039	2398160	.	-	0	ID=GCA000144955_02360;Name=Amidohydrolase;locus_tag=GCA000144955_02360;product=Amidohydrolase;gene=abgB;Parent=GCA000144955_02360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_000523134.1,SO:0001217,UniParc:UPI0001DDA752,UniRef:UniRef100_UPI0001DDA752,UniRef:UniRef50_A0A0E7Q410,UniRef:UniRef90_A0A0E7Q410
contig_1	Infernal	gene	2398455	2398680	.	-	.	ID=GCA000144955_02361_gene;locus_tag=GCA000144955_02361;gene=tsr24
contig_1	Infernal	ncRNA	2398455	2398680	8.1e-28	-	.	ID=GCA000144955_02361;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_02361;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_02361_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2398670	2400316	.	+	.	ID=GCA000144955_02362_gene;locus_tag=GCA000144955_02362;gene=tnp
contig_1	Pyrodigal	CDS	2398670	2400316	.	+	0	ID=GCA000144955_02362;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_02362;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_02362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277736.1,SO:0001217,UniParc:UPI0001DDA753,UniRef:UniRef100_UPI0001DDA753,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	2400349	2401587	.	-	.	ID=GCA000144955_02363_gene;locus_tag=GCA000144955_02363;gene=hutI
contig_1	Pyrodigal	CDS	2400349	2401587	.	-	0	ID=GCA000144955_02363;Name=imidazolonepropionase;locus_tag=GCA000144955_02363;product=imidazolonepropionase;Dbxref=GO:0005506,GO:0005737,GO:0008270,GO:0016812,GO:0019556,GO:0019557,GO:0050480;gene=hutI;Parent=GCA000144955_02363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1228,COG:Q,KEGG:K01468,RefSeq:WP_000998761.1,SO:0001217,UniParc:UPI0001C11F6C,UniRef:UniRef100_A0A2S6DDP5,UniRef:UniRef50_Q2FVT6,UniRef:UniRef90_Q2FVT6;ec_number=3.5.2.7
contig_1	Pyrodigal	gene	2401587	2403248	.	-	.	ID=GCA000144955_02364_gene;locus_tag=GCA000144955_02364;gene=hutU
contig_1	Pyrodigal	CDS	2401587	2403248	.	-	0	ID=GCA000144955_02364;Name=urocanate hydratase;locus_tag=GCA000144955_02364;product=urocanate hydratase;Dbxref=GO:0005737,GO:0006548,GO:0016153,GO:0019556,GO:0019557;gene=hutU;Parent=GCA000144955_02364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2987,COG:E,KEGG:K01712,RefSeq:WP_001226823.1,SO:0001217,UniParc:UPI0000054A05,UniRef:UniRef100_Q5HDM6,UniRef:UniRef50_Q8XW28,UniRef:UniRef90_Q931G1;ec_number=4.2.1.49
contig_1	Pyrodigal	gene	2403408	2404292	.	+	.	ID=GCA000144955_02365_gene;locus_tag=GCA000144955_02365;gene=lysR
contig_1	Pyrodigal	CDS	2403408	2404292	.	+	0	ID=GCA000144955_02365;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000144955_02365;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000144955_02365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000691839.1,SO:0001217,UniParc:UPI0000054A06,UniRef:UniRef100_Q2FVT4,UniRef:UniRef50_Q2FVT4,UniRef:UniRef90_Q2FVT4
contig_1	Pyrodigal	gene	2405026	2405961	.	-	.	ID=GCA000144955_02366_gene;locus_tag=GCA000144955_02366;gene=hutG
contig_1	Pyrodigal	CDS	2405026	2405961	.	-	0	ID=GCA000144955_02366;Name=formimidoylglutamase;locus_tag=GCA000144955_02366;product=formimidoylglutamase;Dbxref=GO:0008783,GO:0019556,GO:0019557,GO:0030145,GO:0033389,GO:0050415;gene=hutG;Parent=GCA000144955_02366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01479,RefSeq:WP_000277976.1,SO:0001217,UniParc:UPI0001DDA754,UniRef:UniRef100_UPI0001DDA754,UniRef:UniRef50_Q2FVT2,UniRef:UniRef90_Q2FVT2;ec_number=3.5.3.8
contig_1	Pyrodigal	gene	2406251	2407507	.	+	.	ID=GCA000144955_02367_gene;locus_tag=GCA000144955_02367;gene=sdpC
contig_1	Pyrodigal	CDS	2406251	2407507	.	+	0	ID=GCA000144955_02367;Name=CPBP family intramembrane metalloprotease SdpC;locus_tag=GCA000144955_02367;product=CPBP family intramembrane metalloprotease SdpC;Dbxref=GO:0004222,GO:0005886,GO:0071586;gene=sdpC;Parent=GCA000144955_02367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000794443,COG:COG1266,COG:O,RefSeq:WP_000794438.1,SO:0001217,UniParc:UPI0001DDA755,UniRef:UniRef100_UPI0001DDA755,UniRef:UniRef50_Q2FVT1,UniRef:UniRef90_Q2FVT1
contig_1	Pyrodigal	gene	2407572	2408258	.	-	.	ID=GCA000144955_02368_gene;locus_tag=GCA000144955_02368;gene=rpiA
contig_1	Pyrodigal	CDS	2407572	2408258	.	-	0	ID=GCA000144955_02368;Name=ribose 5-phosphate isomerase A;locus_tag=GCA000144955_02368;product=ribose 5-phosphate isomerase A;Dbxref=GO:0004751,GO:0005829,GO:0006014,GO:0009052;gene=rpiA;Parent=GCA000144955_02368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,RefSeq:WP_000655862.1,SO:0001217,UniParc:UPI0001DDA756,UniRef:UniRef100_UPI0001DDA756,UniRef:UniRef50_Q5HLQ9,UniRef:UniRef90_P66694;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	2408429	2409082	.	+	.	ID=GCA000144955_02369_gene;locus_tag=GCA000144955_02369;gene=yiiM
contig_1	Pyrodigal	CDS	2408429	2409082	.	+	0	ID=GCA000144955_02369;Name=MOSC domain-containing protein;locus_tag=GCA000144955_02369;product=MOSC domain-containing protein;gene=yiiM;Parent=GCA000144955_02369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2258,COG:FV,RefSeq:WP_000623453.1,SO:0001217,UniParc:UPI0001DDA757,UniRef:UniRef100_UPI0001DDA757,UniRef:UniRef50_Q5HLQ8,UniRef:UniRef90_Q2FVS9
contig_1	Pyrodigal	gene	2409318	2410337	.	-	.	ID=GCA000144955_02370_gene;locus_tag=GCA000144955_02370;gene=galM
contig_1	Pyrodigal	CDS	2409318	2410337	.	-	0	ID=GCA000144955_02370;Name=Aldose 1-epimerase;locus_tag=GCA000144955_02370;product=Aldose 1-epimerase;gene=galM;Parent=GCA000144955_02370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_000634688.1,SO:0001217,UniParc:UPI0001DDA758,UniRef:UniRef100_UPI0001DDA758,UniRef:UniRef50_A0A0D6XRD3,UniRef:UniRef90_A0A2S6DDQ6
contig_1	Pyrodigal	gene	2410367	2410693	.	-	.	ID=GCA000144955_02371_gene;locus_tag=GCA000144955_02371;gene=ynfA
contig_1	Pyrodigal	CDS	2410367	2410693	.	-	0	ID=GCA000144955_02371;Name=YnfA family protein;locus_tag=GCA000144955_02371;product=YnfA family protein;Dbxref=GO:0005886,GO:0016020;gene=ynfA;Parent=GCA000144955_02371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1742,COG:R,RefSeq:WP_000966697.1,SO:0001217,UniParc:UPI00003B18ED,UniRef:UniRef100_Q6GE96,UniRef:UniRef50_O31553,UniRef:UniRef90_Q2FVS6
contig_1	Pyrodigal	gene	2410911	2412143	.	-	.	ID=GCA000144955_02372_gene;locus_tag=GCA000144955_02372;gene=natB
contig_1	Pyrodigal	CDS	2410911	2412143	.	-	0	ID=GCA000144955_02372;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000144955_02372;product=ABC-2 type transporter transmembrane domain-containing protein;gene=natB;Parent=GCA000144955_02372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1668,COG:CP,RefSeq:WP_000548710.1,SO:0001217,UniParc:UPI0001DDA759,UniRef:UniRef100_UPI0001DDA759,UniRef:UniRef50_Q2FVS4,UniRef:UniRef90_Q2FVS4
contig_1	Pyrodigal	gene	2412136	2413035	.	-	.	ID=GCA000144955_02373_gene;locus_tag=GCA000144955_02373;gene=yhaQ
contig_1	Pyrodigal	CDS	2412136	2413035	.	-	0	ID=GCA000144955_02373;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_02373;product=ABC transporter domain-containing protein;gene=yhaQ;Parent=GCA000144955_02373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4152,COG:R,RefSeq:WP_000524839.1,SO:0001217,UniParc:UPI0001DDA75A,UniRef:UniRef100_UPI0001DDA75A,UniRef:UniRef50_Q2FVS3,UniRef:UniRef90_Q2FVS3
contig_1	Pyrodigal	gene	2413266	2413913	.	-	.	ID=GCA000144955_02374_gene;locus_tag=GCA000144955_02374;gene=yhaH
contig_1	Pyrodigal	CDS	2413266	2413913	.	-	0	ID=GCA000144955_02374;Name=DUF805 domain-containing protein;locus_tag=GCA000144955_02374;product=DUF805 domain-containing protein;gene=yhaH;Parent=GCA000144955_02374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_000436653.1,SO:0001217,UniParc:UPI0001DDA75B,UniRef:UniRef100_UPI0001DDA75B,UniRef:UniRef50_Q2FVS2,UniRef:UniRef90_Q2FVS2
contig_1	Pyrodigal	gene	2414312	2414920	.	+	.	ID=GCA000144955_02375_gene;locus_tag=GCA000144955_02375;gene=mpg
contig_1	Pyrodigal	CDS	2414312	2414920	.	+	0	ID=GCA000144955_02375;Name=Putative 3-methyladenine DNA glycosylase;locus_tag=GCA000144955_02375;product=Putative 3-methyladenine DNA glycosylase;Dbxref=GO:0003677,GO:0003905,GO:0006284;gene=mpg;Parent=GCA000144955_02375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2094,COG:L,RefSeq:WP_000348297.1,SO:0001217,UniParc:UPI00005FE770,UniRef:UniRef100_Q2YYZ2,UniRef:UniRef50_Q2FVS1,UniRef:UniRef90_Q2FVS1;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	2415256	2416464	.	+	.	ID=GCA000144955_02376_gene;locus_tag=GCA000144955_02376;gene=gltS
contig_1	Pyrodigal	CDS	2415256	2416464	.	+	0	ID=GCA000144955_02376;Name=sodium/glutamate symporter;locus_tag=GCA000144955_02376;product=sodium/glutamate symporter;Dbxref=GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA000144955_02376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,KEGG:K03312,RefSeq:WP_000571584.1,SO:0001217,UniParc:UPI00003B18F4,UniRef:UniRef100_Q2FVS0,UniRef:UniRef50_A0A380G4D5,UniRef:UniRef90_A0A390UCJ6
contig_1	Infernal	gene	2416542	2416767	.	-	.	ID=GCA000144955_02377_gene;locus_tag=GCA000144955_02377;gene=tsr24
contig_1	Infernal	ncRNA	2416542	2416767	2.2e-28	-	.	ID=GCA000144955_02377;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_02377;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_02377_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2416757	2418403	.	+	.	ID=GCA000144955_02378_gene;locus_tag=GCA000144955_02378;gene=tnp
contig_1	Pyrodigal	CDS	2416757	2418403	.	+	0	ID=GCA000144955_02378;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000144955_02378;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000144955_02378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_014532790.1,SO:0001217,UniParc:UPI0001DDA75C,UniRef:UniRef100_UPI0001DDA75C,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	2418427	2419476	.	-	.	ID=GCA000144955_02379_gene;locus_tag=GCA000144955_02379;gene=fni
contig_1	Pyrodigal	CDS	2418427	2419476	.	-	0	ID=GCA000144955_02379;Name=type 2 isopentenyl-diphosphate Delta-isomerase;locus_tag=GCA000144955_02379;product=type 2 isopentenyl-diphosphate Delta-isomerase;Dbxref=GO:0000287,GO:0004452,GO:0005737,GO:0008299,GO:0010181,GO:0016491,GO:0070402;gene=fni;Parent=GCA000144955_02379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_001279382.1,SO:0001217,UniParc:UPI000175C51B,UniRef:UniRef100_A0A0D1JLA5,UniRef:UniRef50_Q2FVR9,UniRef:UniRef90_Q2FVR9;ec_number=5.3.3.2
contig_1	Pyrodigal	gene	2419507	2420454	.	-	.	ID=GCA000144955_02380_gene;locus_tag=GCA000144955_02380;gene=corA
contig_1	Pyrodigal	CDS	2419507	2420454	.	-	0	ID=GCA000144955_02380;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000144955_02380;product=magnesium/cobalt transporter CorA;Dbxref=GO:0006824,GO:0015087,GO:0015095,GO:0015693,GO:0016020;gene=corA;Parent=GCA000144955_02380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_001229249.1,SO:0001217,UniParc:UPI0001DDA75D,UniRef:UniRef100_UPI0001DDA75D,UniRef:UniRef50_A0A2I7YA74,UniRef:UniRef90_A0A2I7YA74
contig_1	Pyrodigal	gene	2420551	2421042	.	+	.	ID=GCA000144955_02381_gene;locus_tag=GCA000144955_02381;gene=fadM
contig_1	Pyrodigal	CDS	2420551	2421042	.	+	0	ID=GCA000144955_02381;Name=Thioesterase;locus_tag=GCA000144955_02381;product=Thioesterase;gene=fadM;Parent=GCA000144955_02381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000234729.1,SO:0001217,UniParc:UPI0001DDA75E,UniRef:UniRef100_UPI0001DDA75E,UniRef:UniRef50_Q2FVR7,UniRef:UniRef90_Q2FVR7
contig_1	Pyrodigal	gene	2421039	2421458	.	+	.	ID=GCA000144955_02382_gene;locus_tag=GCA000144955_02382
contig_1	Pyrodigal	CDS	2421039	2421458	.	+	0	ID=GCA000144955_02382;Name=Phage protein;locus_tag=GCA000144955_02382;product=Phage protein;Parent=GCA000144955_02382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000128658.1,SO:0001217,UniParc:UPI0001DDA75F,UniRef:UniRef100_UPI0001DDA75F,UniRef:UniRef50_A0A7X9WGR3,UniRef:UniRef90_Q2G2W6
contig_1	Pyrodigal	gene	2421566	2422486	.	-	.	ID=GCA000144955_02383_gene;locus_tag=GCA000144955_02383;gene=aes
contig_1	Pyrodigal	CDS	2421566	2422486	.	-	0	ID=GCA000144955_02383;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000144955_02383;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000144955_02383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000620863.1,SO:0001217,UniParc:UPI0001DDA760,UniRef:UniRef100_UPI0001DDA760,UniRef:UniRef50_Q2G2W3,UniRef:UniRef90_Q2G2W3
contig_1	Pyrodigal	gene	2422694	2423332	.	+	.	ID=GCA000144955_02384_gene;locus_tag=GCA000144955_02384
contig_1	Pyrodigal	CDS	2422694	2423332	.	+	0	ID=GCA000144955_02384;Name=ABC transporter permease;locus_tag=GCA000144955_02384;product=ABC transporter permease;Parent=GCA000144955_02384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184223.1,SO:0001217,UniParc:UPI0001DDA761,UniRef:UniRef100_UPI0001DDA761,UniRef:UniRef50_A0A1S2MLM7,UniRef:UniRef90_Q2G2W2
contig_1	Pyrodigal	gene	2423579	2425510	.	-	.	ID=GCA000144955_02385_gene;locus_tag=GCA000144955_02385;gene=araJ
contig_1	Pyrodigal	CDS	2423579	2425510	.	-	0	ID=GCA000144955_02385;Name=Quinolone resistance protein NorB;locus_tag=GCA000144955_02385;product=Quinolone resistance protein NorB;gene=araJ;Parent=GCA000144955_02385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_000213900.1,SO:0001217,UniParc:UPI0001DDA762,UniRef:UniRef100_UPI0001DDA762,UniRef:UniRef50_Q9F0Z1,UniRef:UniRef90_Q9F0Z1
contig_1	Pyrodigal	gene	2425523	2426170	.	-	.	ID=GCA000144955_02386_gene;locus_tag=GCA000144955_02386;gene=emrA
contig_1	Pyrodigal	CDS	2425523	2426170	.	-	0	ID=GCA000144955_02386;Name=Membrane fusion protein biotin-lipoyl like domain-containing protein;locus_tag=GCA000144955_02386;product=Membrane fusion protein biotin-lipoyl like domain-containing protein;gene=emrA;Parent=GCA000144955_02386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_000738244.1,SO:0001217,UniParc:UPI00003B18FA,UniRef:UniRef100_A0A7Z7R103,UniRef:UniRef50_Q2G2W5,UniRef:UniRef90_Q2G2W5
contig_1	Pyrodigal	gene	2426291	2426845	.	+	.	ID=GCA000144955_02387_gene;locus_tag=GCA000144955_02387;gene=acrR
contig_1	Pyrodigal	CDS	2426291	2426845	.	+	0	ID=GCA000144955_02387;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000144955_02387;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000144955_02387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000828571.1,SO:0001217,UniParc:UPI0001DA228B,UniRef:UniRef100_Q2G2W4,UniRef:UniRef50_Q2G2W4,UniRef:UniRef90_Q2G2W4
contig_1	Pyrodigal	gene	2427072	2428280	.	-	.	ID=GCA000144955_02388_gene;locus_tag=GCA000144955_02388;gene=araJ
contig_1	Pyrodigal	CDS	2427072	2428280	.	-	0	ID=GCA000144955_02388;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000144955_02388;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000144955_02388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_000999124.1,SO:0001217,UniParc:UPI0001DDA763,UniRef:UniRef100_UPI0001DDA763,UniRef:UniRef50_Q9F4G1,UniRef:UniRef90_Q9F4G1
contig_1	Pyrodigal	gene	2428549	2429931	.	-	.	ID=GCA000144955_02389_gene;locus_tag=GCA000144955_02389;gene=tcaA
contig_1	Pyrodigal	CDS	2428549	2429931	.	-	0	ID=GCA000144955_02389;Name=Membrane-associated protein TcaA;locus_tag=GCA000144955_02389;product=Membrane-associated protein TcaA;Dbxref=GO:0005886,GO:0046677,GO:0046872;gene=tcaA;Parent=GCA000144955_02389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4640,COG:S,KEGG:K21463,RefSeq:WP_000833788.1,SO:0001217,UniParc:UPI0001DDA764,UniRef:UniRef100_UPI0001DDA764,UniRef:UniRef50_Q5HDJ9,UniRef:UniRef90_Q5HDJ9
contig_1	Pyrodigal	gene	2430171	2430626	.	-	.	ID=GCA000144955_02390_gene;locus_tag=GCA000144955_02390;gene=tcaR
contig_1	Pyrodigal	CDS	2430171	2430626	.	-	0	ID=GCA000144955_02390;Name=HTH-type transcriptional regulator TcaR;locus_tag=GCA000144955_02390;product=HTH-type transcriptional regulator TcaR;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=tcaR;Parent=GCA000144955_02390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K21454,RefSeq:WP_000238542.1,SO:0001217,UniParc:UPI00000D778A,UniRef:UniRef100_Q9F4G3,UniRef:UniRef50_Q9F4G3,UniRef:UniRef90_Q9F4G3
contig_1	Pyrodigal	gene	2430821	2431789	.	+	.	ID=GCA000144955_02391_gene;locus_tag=GCA000144955_02391;gene=elyC
contig_1	Pyrodigal	CDS	2430821	2431789	.	+	0	ID=GCA000144955_02391;Name=DUF218 domain-containing protein;locus_tag=GCA000144955_02391;product=DUF218 domain-containing protein;gene=elyC;Parent=GCA000144955_02391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_044026046.1,SO:0001217,UniParc:UPI00030B3A7B,UniRef:UniRef100_UPI00030B3A7B,UniRef:UniRef50_Q2FVR4,UniRef:UniRef90_Q2FVR4
contig_1	Pyrodigal	gene	2432020	2432685	.	-	.	ID=GCA000144955_02392_gene;locus_tag=GCA000144955_02392;gene=hrtA
contig_1	Pyrodigal	CDS	2432020	2432685	.	-	0	ID=GCA000144955_02392;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000144955_02392;product=Putative hemin import ATP-binding protein HrtA;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857;gene=hrtA;Parent=GCA000144955_02392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_001229908.1,SO:0001217,UniParc:UPI0001DDA766,UniRef:UniRef100_UPI0001DDA766,UniRef:UniRef50_Q99RR8,UniRef:UniRef90_Q99RR8;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2432685	2433740	.	-	.	ID=GCA000144955_02393_gene;locus_tag=GCA000144955_02393;gene=hrtB
contig_1	Pyrodigal	CDS	2432685	2433740	.	-	0	ID=GCA000144955_02393;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000144955_02393;product=Putative hemin transport system permease protein HrtB;Dbxref=GO:0005886;gene=hrtB;Parent=GCA000144955_02393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09813,RefSeq:WP_000761402.1,SO:0001217,UniParc:UPI0001DDA767,UniRef:UniRef100_UPI0001DDA767,UniRef:UniRef50_Q2FVR0,UniRef:UniRef90_Q2FVR0
contig_1	Pyrodigal	gene	2433876	2434550	.	+	.	ID=GCA000144955_02394_gene;locus_tag=GCA000144955_02394;gene=hssR
contig_1	Pyrodigal	CDS	2433876	2434550	.	+	0	ID=GCA000144955_02394;Name=DNA-binding heme response regulator HssR;locus_tag=GCA000144955_02394;product=DNA-binding heme response regulator HssR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=hssR;Parent=GCA000144955_02394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000249498,COG:COG0745,COG:TK,RefSeq:WP_000249495.1,SO:0001217,UniParc:UPI0001DDA768,UniRef:UniRef100_UPI0001DDA768,UniRef:UniRef50_Q2FVQ9,UniRef:UniRef90_Q2FVQ9
contig_1	Pyrodigal	gene	2434543	2435916	.	+	.	ID=GCA000144955_02395_gene;locus_tag=GCA000144955_02395;gene=hssS
contig_1	Pyrodigal	CDS	2434543	2435916	.	+	0	ID=GCA000144955_02395;Name=heme sensor histidine kinase HssS;locus_tag=GCA000144955_02395;product=heme sensor histidine kinase HssS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hssS;Parent=GCA000144955_02395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000477337,COG:COG0642,COG:T,RefSeq:WP_000477327.1,SO:0001217,UniParc:UPI0001DDA769,UniRef:UniRef100_UPI0001DDA769,UniRef:UniRef50_Q2FVQ8,UniRef:UniRef90_Q2FVQ8;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2436078	2436521	.	+	.	ID=GCA000144955_02396_gene;locus_tag=GCA000144955_02396;gene=lytTR
contig_1	Pyrodigal	CDS	2436078	2436521	.	+	0	ID=GCA000144955_02396;Name=putative HTH-type transcriptional regulator MW2284;locus_tag=GCA000144955_02396;product=putative HTH-type transcriptional regulator MW2284;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytTR;Parent=GCA000144955_02396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3289,COG:K,RefSeq:WP_000977025.1,SO:0001217,UniParc:UPI0001DDA76A,UniRef:UniRef100_A0A6A9GVS8,UniRef:UniRef50_Q2FVQ7,UniRef:UniRef90_Q2FVQ7
contig_1	Pyrodigal	gene	2436518	2436973	.	+	.	ID=GCA000144955_02397_gene;locus_tag=GCA000144955_02397
contig_1	Pyrodigal	CDS	2436518	2436973	.	+	0	ID=GCA000144955_02397;Name=DUF3021 domain-containing protein;locus_tag=GCA000144955_02397;product=DUF3021 domain-containing protein;Parent=GCA000144955_02397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000793173.1,SO:0001217,UniParc:UPI0001DDA76B,UniRef:UniRef100_UPI0001DDA76B,UniRef:UniRef50_Q2FVQ6,UniRef:UniRef90_Q2FVQ6
contig_1	Pyrodigal	gene	2437038	2438516	.	-	.	ID=GCA000144955_02398_gene;locus_tag=GCA000144955_02398;gene=mqo
contig_1	Pyrodigal	CDS	2437038	2438516	.	-	0	ID=GCA000144955_02398;Name=malate dehydrogenase (quinone);locus_tag=GCA000144955_02398;product=malate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=mqo;Parent=GCA000144955_02398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,RefSeq:WP_000211370.1,SO:0001217,UniParc:UPI0001DDA76C,UniRef:UniRef100_UPI0001DDA76C,UniRef:UniRef50_C5DAE0,UniRef:UniRef90_P65421;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2438896	2440494	.	-	.	ID=GCA000144955_02399_gene;locus_tag=GCA000144955_02399;gene=lldP
contig_1	Pyrodigal	CDS	2438896	2440494	.	-	0	ID=GCA000144955_02399;Name=L-lactate permease;locus_tag=GCA000144955_02399;product=L-lactate permease;gene=lldP;Parent=GCA000144955_02399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,RefSeq:WP_000960862.1,SO:0001217,UniParc:UPI00003B1909,UniRef:UniRef100_A0A7Z7R0D1,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2X2JS03
contig_1	Pyrodigal	gene	2440811	2442484	.	+	.	ID=GCA000144955_02400_gene;locus_tag=GCA000144955_02400;gene=tagB
contig_1	Pyrodigal	CDS	2440811	2442484	.	+	0	ID=GCA000144955_02400;Name=CDP-glycerol glycerophosphotransferase family protein;locus_tag=GCA000144955_02400;product=CDP-glycerol glycerophosphotransferase family protein;gene=tagB;Parent=GCA000144955_02400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_044026103.1,SO:0001217,UniParc:UPI0005C61F3B,UniRef:UniRef100_UPI0005C61F3B,UniRef:UniRef50_Q2FVQ3,UniRef:UniRef90_Q2FVQ3
contig_1	Pyrodigal	gene	2442637	2443266	.	-	.	ID=GCA000144955_02401_gene;locus_tag=GCA000144955_02401
contig_1	Pyrodigal	CDS	2442637	2443266	.	-	0	ID=GCA000144955_02401;Name=putative lipoprotein SAV2368;locus_tag=GCA000144955_02401;product=putative lipoprotein SAV2368;Dbxref=GO:0005886;Parent=GCA000144955_02401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000827006.1,SO:0001217,UniParc:UPI0001DA22F4,UniRef:UniRef100_A0A380DRF9,UniRef:UniRef50_Q2FVQ2,UniRef:UniRef90_Q2FVQ2
contig_1	Pyrodigal	gene	2443580	2444095	.	-	.	ID=GCA000144955_02402_gene;locus_tag=GCA000144955_02402;gene=rimI
contig_1	Pyrodigal	CDS	2443580	2444095	.	-	0	ID=GCA000144955_02402;Name=Protease synthase and sporulation negative regulatory protein PAI 1;locus_tag=GCA000144955_02402;product=Protease synthase and sporulation negative regulatory protein PAI 1;gene=rimI;Parent=GCA000144955_02402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000907318.1,SO:0001217,UniParc:UPI0001DDA916,UniRef:UniRef100_UPI0001DDA916,UniRef:UniRef50_A0A0U1MSC1,UniRef:UniRef90_A0A0U1MSC1
contig_1	Pyrodigal	gene	2444282	2445286	.	+	.	ID=GCA000144955_02403_gene;locus_tag=GCA000144955_02403;gene=qor
contig_1	Pyrodigal	CDS	2444282	2445286	.	+	0	ID=GCA000144955_02403;Name=Acryloyl-CoA reductase;locus_tag=GCA000144955_02403;product=Acryloyl-CoA reductase;gene=qor;Parent=GCA000144955_02403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000573251.1,SO:0001217,UniParc:UPI00005FE787,UniRef:UniRef100_UPI00005FE787,UniRef:UniRef50_A0A2Y1TSU4,UniRef:UniRef90_A0A2Y1TSU4
contig_1	Pyrodigal	gene	2445332	2445733	.	-	.	ID=GCA000144955_02404_gene;locus_tag=GCA000144955_02404
contig_1	Pyrodigal	CDS	2445332	2445733	.	-	0	ID=GCA000144955_02404;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02404;product=N-acetyltransferase domain-containing protein;Parent=GCA000144955_02404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000241597.1,SO:0001217,UniParc:UPI0001DDA917,UniRef:UniRef100_UPI0001DDA917,UniRef:UniRef50_Q2FVP9,UniRef:UniRef90_Q2FVP9
contig_1	Pyrodigal	gene	2445769	2446803	.	-	.	ID=GCA000144955_02405_gene;locus_tag=GCA000144955_02405
contig_1	Pyrodigal	CDS	2445769	2446803	.	-	0	ID=GCA000144955_02405;Name=Ferredoxin--NADP reductase;locus_tag=GCA000144955_02405;product=Ferredoxin--NADP reductase;Dbxref=GO:0004324,GO:0050660,GO:0050661;Parent=GCA000144955_02405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21567,RefSeq:WP_000655974.1,SO:0001217,UniParc:UPI0001DDA918,UniRef:UniRef100_UPI0001DDA918,UniRef:UniRef50_Q2FVP8,UniRef:UniRef90_Q2FVP8;ec_number=1.18.1.2
contig_1	Pyrodigal	gene	2447034	2447465	.	-	.	ID=GCA000144955_02406_gene;locus_tag=GCA000144955_02406
contig_1	Pyrodigal	CDS	2447034	2447465	.	-	0	ID=GCA000144955_02406;Name=DUF2871 domain-containing protein;locus_tag=GCA000144955_02406;product=DUF2871 domain-containing protein;Parent=GCA000144955_02406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001253469.1,SO:0001217,UniParc:UPI00005FE78A,UniRef:UniRef100_UPI00005FE78A,UniRef:UniRef50_Q2FVP6,UniRef:UniRef90_Q2FVP6
contig_1	Pyrodigal	gene	2447671	2448948	.	-	.	ID=GCA000144955_02407_gene;locus_tag=GCA000144955_02407;gene=yhgE
contig_1	Pyrodigal	CDS	2447671	2448948	.	-	0	ID=GCA000144955_02407;Name=Membrane protein%2C putative;locus_tag=GCA000144955_02407;product=Membrane protein%2C putative;gene=yhgE;Parent=GCA000144955_02407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_001020017.1,SO:0001217,UniParc:UPI0001C0BBCC,UniRef:UniRef100_A0A6B1RKN2,UniRef:UniRef50_B9DJT1,UniRef:UniRef90_Q2FVP4
contig_1	Pyrodigal	gene	2449109	2449732	.	+	.	ID=GCA000144955_02408_gene;locus_tag=GCA000144955_02408;gene=acrR
contig_1	Pyrodigal	CDS	2449109	2449732	.	+	0	ID=GCA000144955_02408;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000144955_02408;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000144955_02408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000656768.1,SO:0001217,UniParc:UPI00019CD664,UniRef:UniRef100_A0A7Z7W2H5,UniRef:UniRef50_Q2FVP3,UniRef:UniRef90_Q2FVP3
contig_1	Pyrodigal	gene	2449778	2450722	.	+	.	ID=GCA000144955_02409_gene;locus_tag=GCA000144955_02409;gene=corA
contig_1	Pyrodigal	CDS	2449778	2450722	.	+	0	ID=GCA000144955_02409;Name=Magnesium transporter CorA family protein;locus_tag=GCA000144955_02409;product=Magnesium transporter CorA family protein;gene=corA;Parent=GCA000144955_02409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_000633068.1,SO:0001217,UniParc:UPI0000054A3C,UniRef:UniRef100_Q2FVP2,UniRef:UniRef50_Q2FVP2,UniRef:UniRef90_Q2FVP2
contig_1	Pyrodigal	gene	2450807	2452249	.	-	.	ID=GCA000144955_02410_gene;locus_tag=GCA000144955_02410;gene=ptsG2
contig_1	Pyrodigal	CDS	2450807	2452249	.	-	0	ID=GCA000144955_02410;Name=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;locus_tag=GCA000144955_02410;product=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;gene=ptsG2;Parent=GCA000144955_02410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_001108131.1,SO:0001217,UniParc:UPI0001DDA919,UniRef:UniRef100_UPI0001DDA919,UniRef:UniRef50_P51184,UniRef:UniRef90_A0A7U7JRC9
contig_1	Pyrodigal	gene	2452432	2452815	.	+	.	ID=GCA000144955_02411_gene;locus_tag=GCA000144955_02411
contig_1	Pyrodigal	CDS	2452432	2452815	.	+	0	ID=GCA000144955_02411;Name=DUF1722 domain-containing protein;locus_tag=GCA000144955_02411;product=DUF1722 domain-containing protein;Parent=GCA000144955_02411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000664362.1,SO:0001217,UniParc:UPI0001DDA91A,UniRef:UniRef100_A0AAE3D4W9,UniRef:UniRef50_A0A0H3JX25,UniRef:UniRef90_A0A0H3JX25
contig_1	Pyrodigal	gene	2454303	2456408	.	+	.	ID=GCA000144955_02412_gene;locus_tag=GCA000144955_02412;gene=rsp
contig_1	Pyrodigal	CDS	2454303	2456408	.	+	0	ID=GCA000144955_02412;Name=AraC family transcriptional regulator Rsp;locus_tag=GCA000144955_02412;product=AraC family transcriptional regulator Rsp;Dbxref=GO:0003700,GO:0006355,GO:0043565;gene=rsp;Parent=GCA000144955_02412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000128367.1,SO:0001217,UniParc:UPI00003B1914,UniRef:UniRef100_A0A0U1MT29,UniRef:UniRef50_A0A0U1MT29,UniRef:UniRef90_A0A0U1MT29
contig_1	Pyrodigal	gene	2456479	2456901	.	+	.	ID=GCA000144955_02413_gene;locus_tag=GCA000144955_02413;gene=yzzA
contig_1	Pyrodigal	CDS	2456479	2456901	.	+	0	ID=GCA000144955_02413;Name=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;locus_tag=GCA000144955_02413;product=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;gene=yzzA;Parent=GCA000144955_02413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3871,COG:S,RefSeq:WP_000071902.1,SO:0001217,UniParc:UPI00005FE791,UniRef:UniRef100_A0A0D1JS50,UniRef:UniRef50_Q2FVN7,UniRef:UniRef90_Q2FVN7
contig_1	Pyrodigal	gene	2457181	2457537	.	+	.	ID=GCA000144955_02414_gene;locus_tag=GCA000144955_02414
contig_1	Pyrodigal	CDS	2457181	2457537	.	+	0	ID=GCA000144955_02414;Name=DUF4889 domain-containing protein;locus_tag=GCA000144955_02414;product=DUF4889 domain-containing protein;Parent=GCA000144955_02414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791210.1,SO:0001217,UniParc:UPI0001C0BBCF,UniRef:UniRef100_A0A2S6D3P4,UniRef:UniRef50_Q2FVN6,UniRef:UniRef90_Q2FVN6
contig_1	Pyrodigal	gene	2457638	2457976	.	-	.	ID=GCA000144955_02415_gene;locus_tag=GCA000144955_02415
contig_1	Pyrodigal	CDS	2457638	2457976	.	-	0	ID=GCA000144955_02415;Name=hypothetical protein;locus_tag=GCA000144955_02415;product=hypothetical protein;Parent=GCA000144955_02415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF10399.14
contig_1	Pyrodigal	gene	2458032	2459309	.	-	.	ID=GCA000144955_02416_gene;locus_tag=GCA000144955_02416;gene=gltP
contig_1	Pyrodigal	CDS	2458032	2459309	.	-	0	ID=GCA000144955_02416;Name=Cation:dicarboxylase symporter family transporter;locus_tag=GCA000144955_02416;product=Cation:dicarboxylase symporter family transporter;gene=gltP;Parent=GCA000144955_02416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1301,KEGG:K11102,RefSeq:WP_001173165.1,SO:0001217,UniParc:UPI00000D7873,UniRef:UniRef100_Q2FVN5,UniRef:UniRef50_Q2FVN5,UniRef:UniRef90_Q2FVN5
contig_1	Pyrodigal	gene	2459491	2459856	.	-	.	ID=GCA000144955_02417_gene;locus_tag=GCA000144955_02417
contig_1	Pyrodigal	CDS	2459491	2459856	.	-	0	ID=GCA000144955_02417;Name=DUF3139 domain-containing protein;locus_tag=GCA000144955_02417;product=DUF3139 domain-containing protein;Parent=GCA000144955_02417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727537.1,SO:0001217,UniParc:UPI0000054770,UniRef:UniRef100_Q2FVN4,UniRef:UniRef50_Q2FVN4,UniRef:UniRef90_Q2FVN4
contig_1	Pyrodigal	gene	2460254	2460700	.	+	.	ID=GCA000144955_02418_gene;locus_tag=GCA000144955_02418;gene=sarZ
contig_1	Pyrodigal	CDS	2460254	2460700	.	+	0	ID=GCA000144955_02418;Name=HTH-type transcriptional regulator SarZ;locus_tag=GCA000144955_02418;product=HTH-type transcriptional regulator SarZ;Dbxref=GO:0003677,GO:0003700,GO:0005737;gene=sarZ;Parent=GCA000144955_02418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000289215.1,SO:0001217,UniParc:UPI00000CAC1E,UniRef:UniRef100_Q99RP3,UniRef:UniRef50_Q2FVN3,UniRef:UniRef90_Q2FVN3
contig_1	Pyrodigal	gene	2460922	2461344	.	+	.	ID=GCA000144955_02419_gene;locus_tag=GCA000144955_02419
contig_1	Pyrodigal	CDS	2460922	2461344	.	+	0	ID=GCA000144955_02419;Name=Crystallin;locus_tag=GCA000144955_02419;product=Crystallin;Parent=GCA000144955_02419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FVN2,UniRef:UniRef90_A0A0D1IXM8
contig_1	Pyrodigal	gene	2461451	2462620	.	-	.	ID=GCA000144955_02420_gene;locus_tag=GCA000144955_02420;gene=narT
contig_1	Pyrodigal	CDS	2461451	2462620	.	-	0	ID=GCA000144955_02420;Name=putative nitrate transporter NarT;locus_tag=GCA000144955_02420;product=putative nitrate transporter NarT;Dbxref=GO:0005886,GO:0015112,GO:0042128;gene=narT;Parent=GCA000144955_02420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2223,COG:P,KEGG:K10850,RefSeq:WP_000278564.1,SO:0001217,UniParc:UPI0001DDA91C,UniRef:UniRef100_UPI0001DDA91C,UniRef:UniRef50_Q2FVN1,UniRef:UniRef90_Q2FVN1
contig_1	Pyrodigal	gene	2463047	2463700	.	-	.	ID=GCA000144955_02421_gene;locus_tag=GCA000144955_02421;gene=nreC
contig_1	Pyrodigal	CDS	2463047	2463700	.	-	0	ID=GCA000144955_02421;Name=nitrate respiration regulation response regulator NreC;locus_tag=GCA000144955_02421;product=nitrate respiration regulation response regulator NreC;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=nreC;Parent=GCA000144955_02421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_015901130,BlastRules:WP_016911488,RefSeq:WP_000706314.1,SO:0001217,UniParc:UPI00003B191C,UniRef:UniRef100_Q6GE42,UniRef:UniRef50_Q7WZY4,UniRef:UniRef90_Q6GE42
contig_1	Pyrodigal	gene	2463723	2464757	.	-	.	ID=GCA000144955_02422_gene;locus_tag=GCA000144955_02422;gene=nreB
contig_1	Pyrodigal	CDS	2463723	2464757	.	-	0	ID=GCA000144955_02422;Name=nitrate respiration regulation sensor histidine kinase NreB;locus_tag=GCA000144955_02422;product=nitrate respiration regulation sensor histidine kinase NreB;Dbxref=GO:0000155,GO:0005506,GO:0005524,GO:0005737,GO:0016020,GO:0046983,GO:0051539;gene=nreB;Parent=GCA000144955_02422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000606551,BlastRules:WP_011274984,BlastRules:WP_015901131,COG:COG4585,COG:T,KEGG:K07683,RefSeq:WP_000606546.1,SO:0001217,UniParc:UPI0000054B87,UniRef:UniRef100_Q2FVM6,UniRef:UniRef50_Q7WZY5,UniRef:UniRef90_Q2FVM6;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2464781	2465233	.	-	.	ID=GCA000144955_02423_gene;locus_tag=GCA000144955_02423;gene=nreA
contig_1	Pyrodigal	CDS	2464781	2465233	.	-	0	ID=GCA000144955_02423;Name=nitrate respiration regulation accessory nitrate sensor NreA;locus_tag=GCA000144955_02423;product=nitrate respiration regulation accessory nitrate sensor NreA;gene=nreA;Parent=GCA000144955_02423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2203,COG:T,KEGG:K10851,RefSeq:WP_000186934.1,SO:0001217,UniParc:UPI0001DDA91D,UniRef:UniRef100_UPI0001DDA91D,UniRef:UniRef50_Q2FVM5,UniRef:UniRef90_Q2FVM5
contig_1	Pyrodigal	gene	2465253	2465930	.	-	.	ID=GCA000144955_02424_gene;locus_tag=GCA000144955_02424;gene=narI
contig_1	Pyrodigal	CDS	2465253	2465930	.	-	0	ID=GCA000144955_02424;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000144955_02424;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0008940,GO:0009325,GO:0019645;gene=narI;Parent=GCA000144955_02424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2181,COG:CP,RefSeq:WP_000934156.1,SO:0001217,UniParc:UPI00005FE798,UniRef:UniRef100_A0A0D1K073,UniRef:UniRef50_A0A7U7PWT4,UniRef:UniRef90_A0A7U7PWT4;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2465923	2466498	.	-	.	ID=GCA000144955_02425_gene;locus_tag=GCA000144955_02425;gene=narJ
contig_1	Pyrodigal	CDS	2465923	2466498	.	-	0	ID=GCA000144955_02425;Name=nitrate reductase molybdenum cofactor assembly chaperone;locus_tag=GCA000144955_02425;product=nitrate reductase molybdenum cofactor assembly chaperone;Dbxref=GO:0051082,GO:0051131;gene=narJ;Parent=GCA000144955_02425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2180,COG:CPO,KEGG:K00373,RefSeq:WP_000606768.1,SO:0001217,UniParc:UPI00000CA9C7,UniRef:UniRef100_W8TTV0,UniRef:UniRef50_A0A0D0RML2,UniRef:UniRef90_W8TTV0
contig_1	Pyrodigal	gene	2466491	2468050	.	-	.	ID=GCA000144955_02426_gene;locus_tag=GCA000144955_02426;gene=narH
contig_1	Pyrodigal	CDS	2466491	2468050	.	-	0	ID=GCA000144955_02426;Name=nitrate reductase subunit beta;locus_tag=GCA000144955_02426;product=nitrate reductase subunit beta;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narH;Parent=GCA000144955_02426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1140,COG:CP,KEGG:K00371,RefSeq:WP_000692645.1,SO:0001217,UniParc:UPI00000D9FA4,UniRef:UniRef100_Q2FVM2,UniRef:UniRef50_P11349,UniRef:UniRef90_A0A0U1MSV9;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2468040	2471729	.	-	.	ID=GCA000144955_02427_gene;locus_tag=GCA000144955_02427;gene=narG
contig_1	Pyrodigal	CDS	2468040	2471729	.	-	0	ID=GCA000144955_02427;Name=nitrate reductase subunit alpha;locus_tag=GCA000144955_02427;product=nitrate reductase subunit alpha;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narG;Parent=GCA000144955_02427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5013,COG:CP,KEGG:K00370,RefSeq:WP_000514383.1,SO:0001217,UniParc:UPI0001DDA91E,UniRef:UniRef100_UPI0001DDA91E,UniRef:UniRef50_A0A127FDB7,UniRef:UniRef90_A0A2S6DTK4;ec_number=1.7.99.4
contig_1	Infernal	gene	2471893	2472115	.	+	.	ID=GCA000144955_02428_gene;locus_tag=GCA000144955_02428;gene=S35
contig_1	Infernal	ncRNA	2471893	2472115	3.4e-18	+	.	ID=GCA000144955_02428;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02428;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02428_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2472238	2473215	.	-	.	ID=GCA000144955_02429_gene;locus_tag=GCA000144955_02429;gene=cysG
contig_1	Pyrodigal	CDS	2472238	2473215	.	-	0	ID=GCA000144955_02429;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000144955_02429;product=uroporphyrinogen-III C-methyltransferase;gene=cysG;Parent=GCA000144955_02429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0007,COG:H,RefSeq:WP_000109713.1,SO:0001217,UniParc:UPI0001DDA91F,UniRef:UniRef100_UPI0001DDA91F,UniRef:UniRef50_A0A3A5LVF3,UniRef:UniRef90_A0A3A5LVF3
contig_1	Pyrodigal	gene	2473206	2473520	.	-	.	ID=GCA000144955_02430_gene;locus_tag=GCA000144955_02430;gene=nirD
contig_1	Pyrodigal	CDS	2473206	2473520	.	-	0	ID=GCA000144955_02430;Name=Nitrite reductase (NAD(P)H) small subunit;locus_tag=GCA000144955_02430;product=Nitrite reductase (NAD(P)H) small subunit;gene=nirD;Parent=GCA000144955_02430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2146,COG:PQ,KEGG:K26138,RefSeq:WP_000448226.1,SO:0001217,UniParc:UPI0001DDA920,UniRef:UniRef100_UPI0001DDA920,UniRef:UniRef50_A0A3A3AHT4,UniRef:UniRef90_A0A3A3AHT4;ec_number=1.7.1.4
contig_1	Pyrodigal	gene	2473524	2475929	.	-	.	ID=GCA000144955_02431_gene;locus_tag=GCA000144955_02431;gene=nirB
contig_1	Pyrodigal	CDS	2473524	2475929	.	-	0	ID=GCA000144955_02431;Name=NAD(P)/FAD-dependent oxidoreductase;locus_tag=GCA000144955_02431;product=NAD(P)/FAD-dependent oxidoreductase;gene=nirB;Parent=GCA000144955_02431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1251,RefSeq:WP_001118715.1,SO:0001217,UniParc:UPI0001DDA921,UniRef:UniRef100_UPI0001DDA921,UniRef:UniRef50_A0A380G539,UniRef:UniRef90_A0A3M9GSL0
contig_1	Pyrodigal	gene	2475957	2476724	.	-	.	ID=GCA000144955_02432_gene;locus_tag=GCA000144955_02432;gene=sirB
contig_1	Pyrodigal	CDS	2475957	2476724	.	-	0	ID=GCA000144955_02432;Name=Sirohydrochlorin chelatase;locus_tag=GCA000144955_02432;product=Sirohydrochlorin chelatase;gene=sirB;Parent=GCA000144955_02432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2138,COG:H,SO:0001217,UniRef:UniRef50_Q2G1V2,UniRef:UniRef90_Q2G1V2
contig_1	Pyrodigal	gene	2476954	2477490	.	-	.	ID=GCA000144955_02433_gene;locus_tag=GCA000144955_02433;gene=yhbS
contig_1	Pyrodigal	CDS	2476954	2477490	.	-	0	ID=GCA000144955_02433;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02433;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000144955_02433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,KEGG:K00680,RefSeq:WP_000185900.1,SO:0001217,UniParc:UPI0001DDA923,UniRef:UniRef100_UPI0001DDA923,UniRef:UniRef50_Q2G1V1,UniRef:UniRef90_Q2G1V1;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2477903	2478727	.	-	.	ID=GCA000144955_02434_gene;locus_tag=GCA000144955_02434;gene=focA
contig_1	Pyrodigal	CDS	2477903	2478727	.	-	0	ID=GCA000144955_02434;Name=Formate/nitrite transporter%2C putative;locus_tag=GCA000144955_02434;product=Formate/nitrite transporter%2C putative;gene=focA;Parent=GCA000144955_02434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000594633.1,SO:0001217,UniParc:UPI0001DDA924,UniRef:UniRef100_A0A0D1HWZ6,UniRef:UniRef50_Q2G1V0,UniRef:UniRef90_Q2G1V0
contig_1	Pyrodigal	gene	2478930	2479112	.	-	.	ID=GCA000144955_02435_gene;locus_tag=GCA000144955_02435
contig_1	Pyrodigal	CDS	2478930	2479112	.	-	0	ID=GCA000144955_02435;Name=Membrane protein;locus_tag=GCA000144955_02435;product=Membrane protein;Parent=GCA000144955_02435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000079140.1,SO:0001217,UniParc:UPI00003B1929,UniRef:UniRef100_A0A7Z7W2N9,UniRef:UniRef50_Q2G1U7,UniRef:UniRef90_A0AAE2ZSI2
contig_1	Pyrodigal	gene	2479199	2479666	.	-	.	ID=GCA000144955_02436_gene;locus_tag=GCA000144955_02436;gene=yndB
contig_1	Pyrodigal	CDS	2479199	2479666	.	-	0	ID=GCA000144955_02436;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000144955_02436;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000144955_02436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_000153340.1,SO:0001217,UniParc:UPI00003B192A,UniRef:UniRef100_A0A7Z7W2X6,UniRef:UniRef50_Q5HLI9,UniRef:UniRef90_Q2G1U9
contig_1	Pyrodigal	gene	2479852	2481399	.	-	.	ID=GCA000144955_02437_gene;locus_tag=GCA000144955_02437;gene=adcA
contig_1	Pyrodigal	CDS	2479852	2481399	.	-	0	ID=GCA000144955_02437;Name=zinc ABC transporter substrate-binding lipoprotein AdcA;locus_tag=GCA000144955_02437;product=zinc ABC transporter substrate-binding lipoprotein AdcA;gene=adcA;Parent=GCA000144955_02437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3443,COG:P,RefSeq:WP_000727756.1,SO:0001217,UniParc:UPI00000D9FAC,UniRef:UniRef100_A0A1K8I4B4,UniRef:UniRef50_A0A391LQP8,UniRef:UniRef90_A0A391LQP8
contig_1	Pyrodigal	gene	2481693	2481959	.	-	.	ID=GCA000144955_02438_gene;locus_tag=GCA000144955_02438
contig_1	Pyrodigal	CDS	2481693	2481959	.	-	0	ID=GCA000144955_02438;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000144955_02438;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000144955_02438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000113263.1,SO:0001217,UniParc:UPI00005FE7A4,UniRef:UniRef100_A0A2S6D1N9,UniRef:UniRef50_A0A3A3ATA4,UniRef:UniRef90_A0A3A3ATA4
contig_1	Pyrodigal	gene	2481959	2482210	.	-	.	ID=GCA000144955_02439_gene;locus_tag=GCA000144955_02439;gene=stbD
contig_1	Pyrodigal	CDS	2481959	2482210	.	-	0	ID=GCA000144955_02439;Name=Antitoxin;locus_tag=GCA000144955_02439;product=Antitoxin;gene=stbD;Parent=GCA000144955_02439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000584499.1,SO:0001217,UniParc:UPI0000054B99,UniRef:UniRef100_Q2G285,UniRef:UniRef50_Q5DWE0,UniRef:UniRef90_A0A077UKZ8
contig_1	Pyrodigal	gene	2482482	2483081	.	-	.	ID=GCA000144955_02440_gene;locus_tag=GCA000144955_02440;gene=dsbG
contig_1	Pyrodigal	CDS	2482482	2483081	.	-	0	ID=GCA000144955_02440;Name=Thioredoxin-like fold domain-containing protein;locus_tag=GCA000144955_02440;product=Thioredoxin-like fold domain-containing protein;gene=dsbG;Parent=GCA000144955_02440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_000162814.1,SO:0001217,UniParc:UPI0001DDAAAC,UniRef:UniRef100_UPI0001DDAAAC,UniRef:UniRef50_A0AAP8PPS4,UniRef:UniRef90_Q2FVL7
contig_1	Pyrodigal	gene	2483100	2483462	.	-	.	ID=GCA000144955_02441_gene;locus_tag=GCA000144955_02441
contig_1	Pyrodigal	CDS	2483100	2483462	.	-	0	ID=GCA000144955_02441;Name=DUF4467 domain-containing protein;locus_tag=GCA000144955_02441;product=DUF4467 domain-containing protein;Parent=GCA000144955_02441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000819843.1,SO:0001217,UniParc:UPI00000DA0F2,UniRef:UniRef100_A0A7Z7R0G7,UniRef:UniRef50_A0A640MXZ4,UniRef:UniRef90_Q2FVL6
contig_1	Pyrodigal	gene	2483717	2484967	.	+	.	ID=GCA000144955_02442_gene;locus_tag=GCA000144955_02442;gene=fmhA
contig_1	Pyrodigal	CDS	2483717	2484967	.	+	0	ID=GCA000144955_02442;Name=FemA/FemB family glycyltransferase FmhA;locus_tag=GCA000144955_02442;product=FemA/FemB family glycyltransferase FmhA;gene=fmhA;Parent=GCA000144955_02442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001012222,COG:COG2348,COG:M,RefSeq:WP_001012217.1,SO:0001217,UniParc:UPI0001DDAAAD,UniRef:UniRef100_UPI0001DDAAAD,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_Q9X4D6
contig_1	Pyrodigal	gene	2485064	2485795	.	-	.	ID=GCA000144955_02443_gene;locus_tag=GCA000144955_02443;gene=glnQ
contig_1	Pyrodigal	CDS	2485064	2485795	.	-	0	ID=GCA000144955_02443;Name=Amino acid ABC transporter%2C ATP-binding protein;locus_tag=GCA000144955_02443;product=Amino acid ABC transporter%2C ATP-binding protein;gene=glnQ;Parent=GCA000144955_02443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_000615462.1,SO:0001217,UniParc:UPI0001DDAAAE,UniRef:UniRef100_A0AAW9XDI8,UniRef:UniRef50_A0A564T2N1,UniRef:UniRef90_A0A0Z1CVJ0
contig_1	Pyrodigal	gene	2485792	2486520	.	-	.	ID=GCA000144955_02444_gene;locus_tag=GCA000144955_02444;gene=hisM
contig_1	Pyrodigal	CDS	2485792	2486520	.	-	0	ID=GCA000144955_02444;Name=Amino acid ABC transproter%2C permease protein%2C putative;locus_tag=GCA000144955_02444;product=Amino acid ABC transproter%2C permease protein%2C putative;gene=hisM;Parent=GCA000144955_02444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,SO:0001217,UniParc:UPI00004B5CC3,UniRef:UniRef100_Q2FVL3,UniRef:UniRef50_B9DL82,UniRef:UniRef90_Q2FVL3
contig_1	Pyrodigal	gene	2486492	2487271	.	-	.	ID=GCA000144955_02445_gene;locus_tag=GCA000144955_02445;gene=hisJ
contig_1	Pyrodigal	CDS	2486492	2487271	.	-	0	ID=GCA000144955_02445;Name=Amino acid ABC transporter substrate-binding protein;locus_tag=GCA000144955_02445;product=Amino acid ABC transporter substrate-binding protein;gene=hisJ;Parent=GCA000144955_02445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000825929.1,SO:0001217,UniParc:UPI0000054BA0,UniRef:UniRef100_Q2FVL2,UniRef:UniRef50_B9DL83,UniRef:UniRef90_Q2FVL2
contig_1	Pyrodigal	gene	2487392	2488831	.	-	.	ID=GCA000144955_02446_gene;locus_tag=GCA000144955_02446;gene=mdeA
contig_1	Pyrodigal	CDS	2487392	2488831	.	-	0	ID=GCA000144955_02446;Name=multidrug efflux MFS transporter MdeA;locus_tag=GCA000144955_02446;product=multidrug efflux MFS transporter MdeA;gene=mdeA;Parent=GCA000144955_02446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000038968,COG:COG2814,COG:G,RefSeq:WP_000038962.1,SO:0001217,UniParc:UPI0001DDAAAF,UniRef:UniRef100_UPI0001DDAAAF,UniRef:UniRef50_A0A660A2M0,UniRef:UniRef90_A0A660A2M0
contig_1	Pyrodigal	gene	2489005	2489109	.	+	.	ID=GCA000144955_02447_gene;locus_tag=GCA000144955_02447
contig_1	Pyrodigal	CDS	2489005	2489109	.	+	0	ID=GCA000144955_02447;Name=Metal homeostasis protein;locus_tag=GCA000144955_02447;product=Metal homeostasis protein;Parent=GCA000144955_02447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000762708.1,SO:0001217,UniParc:UPI0000054BA3,UniRef:UniRef100_Q2FVK9,UniRef:UniRef50_Q49ZZ1,UniRef:UniRef90_G5JKK3
contig_1	Pyrodigal	gene	2489263	2489949	.	-	.	ID=GCA000144955_02448_gene;locus_tag=GCA000144955_02448;gene=gpmA
contig_1	Pyrodigal	CDS	2489263	2489949	.	-	0	ID=GCA000144955_02448;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA000144955_02448;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;Dbxref=GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000144955_02448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_001125208.1,SO:0001217,UniParc:UPI0000054BA4,UniRef:UniRef100_Q2FVK8,UniRef:UniRef50_Q9CIM0,UniRef:UniRef90_Q2FVK8;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	2490277	2491143	.	-	.	ID=GCA000144955_02449_gene;locus_tag=GCA000144955_02449;gene=fieF
contig_1	Pyrodigal	CDS	2490277	2491143	.	-	0	ID=GCA000144955_02449;Name=Cation efflux protein cytoplasmic domain-containing protein;locus_tag=GCA000144955_02449;product=Cation efflux protein cytoplasmic domain-containing protein;gene=fieF;Parent=GCA000144955_02449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0053,COG:P,KEGG:K13283,RefSeq:WP_000019121.1,SO:0001217,UniParc:UPI0001DDAAB0,UniRef:UniRef100_UPI0001DDAAB0,UniRef:UniRef50_Q2FVK7,UniRef:UniRef90_Q2FVK7
contig_1	Pyrodigal	gene	2491841	2493154	.	+	.	ID=GCA000144955_02450_gene;locus_tag=GCA000144955_02450;gene=sbi
contig_1	Pyrodigal	CDS	2491841	2493154	.	+	0	ID=GCA000144955_02450;Name=IgG-binding protein SBI;locus_tag=GCA000144955_02450;product=IgG-binding protein SBI;Dbxref=GO:0005576,GO:0005886,GO:0019864;gene=sbi;Parent=GCA000144955_02450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14197,RefSeq:WP_000792582.1,SO:0001217,UniParc:UPI0001DDAAB1,UniRef:UniRef100_UPI0001DDAAB1,UniRef:UniRef50_Q931F4,UniRef:UniRef90_Q931F4,VFDB:VFC0258,VFDB:VFG002421
contig_1	Pyrodigal	gene	2493655	2494620	.	+	.	ID=GCA000144955_02451_gene;locus_tag=GCA000144955_02451;gene=hlgA
contig_1	Pyrodigal	CDS	2493655	2494620	.	+	0	ID=GCA000144955_02451;Name=bi-component gamma-hemolysin HlgAB subunit A;locus_tag=GCA000144955_02451;product=bi-component gamma-hemolysin HlgAB subunit A;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgA;Parent=GCA000144955_02451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594519,NCBIProtein:AUU54669.1,SO:0001217,UniRef:UniRef50_O54081,UniRef:UniRef90_Q5HDD6
contig_1	Pyrodigal	gene	2495187	2496134	.	+	.	ID=GCA000144955_02452_gene;locus_tag=GCA000144955_02452;gene=hlgC
contig_1	Pyrodigal	CDS	2495187	2496134	.	+	0	ID=GCA000144955_02452;Name=bi-component gamma-hemolysin HlgCB subunit C;locus_tag=GCA000144955_02452;product=bi-component gamma-hemolysin HlgCB subunit C;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgC;Parent=GCA000144955_02452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:CAA57277.1,RefSeq:WP_000916718.1,SO:0001217,UniParc:UPI0001DDAAB3,UniRef:UniRef100_UPI0001DDAAB3,UniRef:UniRef50_O54081,UniRef:UniRef90_P31716,VFDB:VFC0235,VFDB:VFG001274
contig_1	Pyrodigal	gene	2496136	2497113	.	+	.	ID=GCA000144955_02453_gene;locus_tag=GCA000144955_02453;gene=hlgB
contig_1	Pyrodigal	CDS	2496136	2497113	.	+	0	ID=GCA000144955_02453;Name=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;locus_tag=GCA000144955_02453;product=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgB;Parent=GCA000144955_02453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001056917,NCBIProtein:CAA57278.1,RefSeq:WP_000783432.1,SO:0001217,UniParc:UPI0001DDAAB4,UniRef:UniRef100_UPI0001DDAAB4,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q2FVK1
contig_1	Pyrodigal	gene	2497164	2497631	.	-	.	ID=GCA000144955_02454_gene;locus_tag=GCA000144955_02454
contig_1	Pyrodigal	CDS	2497164	2497631	.	-	0	ID=GCA000144955_02454;Name=Putative membrane protein;locus_tag=GCA000144955_02454;product=Putative membrane protein;Parent=GCA000144955_02454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000200959.1,SO:0001217,UniParc:UPI0001DDAAB5,UniRef:UniRef100_UPI0001DDAAB5,UniRef:UniRef50_Q2FVK0,UniRef:UniRef90_A0A7U7PWU5
contig_1	Pyrodigal	gene	2497642	2498334	.	-	.	ID=GCA000144955_02455_gene;locus_tag=GCA000144955_02455;gene=bioW
contig_1	Pyrodigal	CDS	2497642	2498334	.	-	0	ID=GCA000144955_02455;Name=6-carboxyhexanoate--CoA ligase;locus_tag=GCA000144955_02455;product=6-carboxyhexanoate--CoA ligase;Dbxref=GO:0000287,GO:0005524,GO:0009102,GO:0042410;gene=bioW;Parent=GCA000144955_02455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1424,COG:H,KEGG:K01906,RefSeq:WP_000286870.1,SO:0001217,UniParc:UPI0001DDAAB6,UniRef:UniRef100_UPI0001DDAAB6,UniRef:UniRef50_Q2FVJ9,UniRef:UniRef90_Q2FVJ9;ec_number=6.2.1.14
contig_1	Pyrodigal	gene	2498345	2499460	.	-	.	ID=GCA000144955_02456_gene;locus_tag=GCA000144955_02456;gene=bioF
contig_1	Pyrodigal	CDS	2498345	2499460	.	-	0	ID=GCA000144955_02456;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000144955_02456;product=8-amino-7-oxononanoate synthase;gene=bioF;Parent=GCA000144955_02456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000971536.1,SO:0001217,UniParc:UPI0005C700E4,UniRef:UniRef100_UPI0005C700E4,UniRef:UniRef50_A0A2I7YAG2,UniRef:UniRef90_A0A2I7YAG2
contig_1	Pyrodigal	gene	2499438	2500445	.	-	.	ID=GCA000144955_02457_gene;locus_tag=GCA000144955_02457;gene=bioB
contig_1	Pyrodigal	CDS	2499438	2500445	.	-	0	ID=GCA000144955_02457;Name=biotin synthase BioB;locus_tag=GCA000144955_02457;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000144955_02457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_001046645.1,SO:0001217,UniParc:UPI00000D7667,UniRef:UniRef100_Q99RK7,UniRef:UniRef50_Q81MB3,UniRef:UniRef90_Q2FVJ7;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	2500447	2501805	.	-	.	ID=GCA000144955_02458_gene;locus_tag=GCA000144955_02458;gene=bioA
contig_1	Pyrodigal	CDS	2500447	2501805	.	-	0	ID=GCA000144955_02458;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000144955_02458;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170;gene=bioA;Parent=GCA000144955_02458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,KEGG:K00833,RefSeq:WP_001110075.1,SO:0001217,UniParc:UPI0001DDAAB8,UniRef:UniRef100_UPI0001DDAAB8,UniRef:UniRef50_Q2FVJ6,UniRef:UniRef90_Q2FVJ6;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	2501783	2502469	.	-	.	ID=GCA000144955_02459_gene;locus_tag=GCA000144955_02459;gene=bioD
contig_1	Pyrodigal	CDS	2501783	2502469	.	-	0	ID=GCA000144955_02459;Name=dethiobiotin synthase;locus_tag=GCA000144955_02459;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0009102;gene=bioD;Parent=GCA000144955_02459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_001217930.1,SO:0001217,UniParc:UPI0001DDAAB9,UniRef:UniRef100_UPI0001DDAAB9,UniRef:UniRef50_Q5HKF0,UniRef:UniRef90_A0A3A5LQG2;ec_number=6.3.3.3
contig_1	Infernal	gene	2502846	2502942	.	+	.	ID=GCA000144955_02460_gene;locus_tag=GCA000144955_02460;gene=fstAT
contig_1	Infernal	ncRNA	2502846	2502942	2.2e-10	+	.	ID=GCA000144955_02460;Name=Fst antitoxin sRNA;locus_tag=GCA000144955_02460;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000144955_02460_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	2503119	2503505	.	-	.	ID=GCA000144955_02461_gene;locus_tag=GCA000144955_02461;gene=gtxA
contig_1	Pyrodigal	CDS	2503119	2503505	.	-	0	ID=GCA000144955_02461;Name=flippase GtxA;locus_tag=GCA000144955_02461;product=flippase GtxA;gene=gtxA;Parent=GCA000144955_02461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779358,COG:COG2246,COG:I,RefSeq:WP_000779361.1,SO:0001217,UniParc:UPI0001DDAABA,UniRef:UniRef100_UPI0001DDAABA,UniRef:UniRef50_Q2FVI8,UniRef:UniRef90_Q2FVI8
contig_1	Pyrodigal	gene	2503773	2504915	.	+	.	ID=GCA000144955_02462_gene;locus_tag=GCA000144955_02462;gene=glxK
contig_1	Pyrodigal	CDS	2503773	2504915	.	+	0	ID=GCA000144955_02462;Name=Glycerate kinase;locus_tag=GCA000144955_02462;product=Glycerate kinase;gene=glxK;Parent=GCA000144955_02462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_001176854.1,SO:0001217,UniParc:UPI0001DDAABB,UniRef:UniRef100_UPI0001DDAABB,UniRef:UniRef50_A0A0U1MSN1,UniRef:UniRef90_A0A0U1MSN1;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	2504975	2505634	.	+	.	ID=GCA000144955_02463_gene;locus_tag=GCA000144955_02463
contig_1	Pyrodigal	CDS	2504975	2505634	.	+	0	ID=GCA000144955_02463;Name=hypothetical protein;locus_tag=GCA000144955_02463;product=hypothetical protein;Parent=GCA000144955_02463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000831296.1,SO:0001217,UniParc:UPI0001DDAABC,UniRef:UniRef100_UPI0001DDAABC,UniRef:UniRef50_Q2FVI6,UniRef:UniRef90_Q2FVI6
contig_1	Pyrodigal	gene	2505817	2507028	.	+	.	ID=GCA000144955_02464_gene;locus_tag=GCA000144955_02464;gene=araJ
contig_1	Pyrodigal	CDS	2505817	2507028	.	+	0	ID=GCA000144955_02464;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000144955_02464;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000144955_02464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_001191924.1,SO:0001217,UniParc:UPI0001DDAABD,UniRef:UniRef100_A0A380DRH4,UniRef:UniRef50_Q2FVI5,UniRef:UniRef90_Q2FVI5
contig_1	Pyrodigal	gene	2507151	2507624	.	-	.	ID=GCA000144955_02465_gene;locus_tag=GCA000144955_02465;gene=ydeE
contig_1	Pyrodigal	CDS	2507151	2507624	.	-	0	ID=GCA000144955_02465;Name=Bacterial transcription activator effector binding domain-containing protein;locus_tag=GCA000144955_02465;product=Bacterial transcription activator effector binding domain-containing protein;gene=ydeE;Parent=GCA000144955_02465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3708,COG:K,RefSeq:WP_000456494.1,SO:0001217,UniParc:UPI0001DDAABE,UniRef:UniRef100_UPI0001DDAABE,UniRef:UniRef50_A0A7U7IFB2,UniRef:UniRef90_A0A7U7IFB2
contig_1	Pyrodigal	gene	2507737	2508393	.	+	.	ID=GCA000144955_02466_gene;locus_tag=GCA000144955_02466;gene=yvpB
contig_1	Pyrodigal	CDS	2507737	2508393	.	+	0	ID=GCA000144955_02466;Name=Peptidase C39-like domain-containing protein;locus_tag=GCA000144955_02466;product=Peptidase C39-like domain-containing protein;gene=yvpB;Parent=GCA000144955_02466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4990,COG:R,RefSeq:WP_001080281.1,SO:0001217,UniParc:UPI00000D7887,UniRef:UniRef100_Q2FVI3,UniRef:UniRef50_Q2FVI3,UniRef:UniRef90_Q2FVI3
contig_1	Pyrodigal	gene	2508456	2509262	.	-	.	ID=GCA000144955_02467_gene;locus_tag=GCA000144955_02467;gene=cpdA
contig_1	Pyrodigal	CDS	2508456	2509262	.	-	0	ID=GCA000144955_02467;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000144955_02467;product=Calcineurin-like phosphoesterase domain-containing protein;gene=cpdA;Parent=GCA000144955_02467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_000690206.1,SO:0001217,UniParc:UPI0001DDAABF,UniRef:UniRef100_UPI0001DDAABF,UniRef:UniRef50_Q2FVI2,UniRef:UniRef90_Q2FVI2
contig_1	Pyrodigal	gene	2509548	2510957	.	+	.	ID=GCA000144955_02468_gene;locus_tag=GCA000144955_02468
contig_1	Pyrodigal	CDS	2509548	2510957	.	+	0	ID=GCA000144955_02468;Name=D-serine/D-alanine/glycine transporter;locus_tag=GCA000144955_02468;product=D-serine/D-alanine/glycine transporter;Parent=GCA000144955_02468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000101538.1,SO:0001217,UniParc:UPI0000054BBC,UniRef:UniRef100_Q2FVI1,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_A0A077UKT4
contig_1	Pyrodigal	gene	2511096	2513174	.	+	.	ID=GCA000144955_02469_gene;locus_tag=GCA000144955_02469;gene=nhaP
contig_1	Pyrodigal	CDS	2511096	2513174	.	+	0	ID=GCA000144955_02469;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000144955_02469;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000144955_02469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,KEGG:K24163,RefSeq:WP_001185691.1,SO:0001217,UniParc:UPI0001DDAAC0,UniRef:UniRef100_UPI0001DDAAC0,UniRef:UniRef50_Q2FVI0,UniRef:UniRef90_Q2FVI0
contig_1	Pyrodigal	gene	2513313	2515142	.	-	.	ID=GCA000144955_02470_gene;locus_tag=GCA000144955_02470
contig_1	Pyrodigal	CDS	2513313	2515142	.	-	0	ID=GCA000144955_02470;Name=APC family permease;locus_tag=GCA000144955_02470;product=APC family permease;Parent=GCA000144955_02470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000483054.1,SO:0001217,UniParc:UPI0001DDAAC1,UniRef:UniRef100_UPI0001DDAAC1,UniRef:UniRef50_P96589,UniRef:UniRef90_UPI0001DDAAC1
contig_1	Pyrodigal	gene	2515374	2516870	.	+	.	ID=GCA000144955_02471_gene;locus_tag=GCA000144955_02471;gene=flp
contig_1	Pyrodigal	CDS	2515374	2516870	.	+	0	ID=GCA000144955_02471;Name=Protein flp;locus_tag=GCA000144955_02471;product=Protein flp;Dbxref=GO:0005886;gene=flp;Parent=GCA000144955_02471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1680,COG:V,RefSeq:WP_000208578.1,SO:0001217,UniParc:UPI0001DDAAC2,UniRef:UniRef100_UPI0001DDAAC2,UniRef:UniRef50_Q2FVH6,UniRef:UniRef90_Q2FVH6
contig_1	Pyrodigal	gene	2516961	2517812	.	-	.	ID=GCA000144955_02472_gene;locus_tag=GCA000144955_02472;gene=wcaG
contig_1	Pyrodigal	CDS	2516961	2517812	.	-	0	ID=GCA000144955_02472;Name=MW2366 protein;locus_tag=GCA000144955_02472;product=MW2366 protein;gene=wcaG;Parent=GCA000144955_02472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000034511.1,SO:0001217,UniParc:UPI0001DDAAC3,UniRef:UniRef100_UPI0001DDAAC3,UniRef:UniRef50_B9DIE7,UniRef:UniRef90_A0A0H3K1K1
contig_1	Pyrodigal	gene	2518135	2519070	.	-	.	ID=GCA000144955_02473_gene;locus_tag=GCA000144955_02473;gene=panE
contig_1	Pyrodigal	CDS	2518135	2519070	.	-	0	ID=GCA000144955_02473;Name=2-dehydropantoate 2-reductase;locus_tag=GCA000144955_02473;product=2-dehydropantoate 2-reductase;gene=panE;Parent=GCA000144955_02473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000684062.1,SO:0001217,UniParc:UPI0001DDAAC4,UniRef:UniRef100_UPI0001DDAAC4,UniRef:UniRef50_A0A0U1EBN6,UniRef:UniRef90_A0A2S6D1V7
contig_1	Pyrodigal	gene	2519298	2520698	.	-	.	ID=GCA000144955_02474_gene;locus_tag=GCA000144955_02474;gene=proP
contig_1	Pyrodigal	CDS	2519298	2520698	.	-	0	ID=GCA000144955_02474;Name=Quinolone resistance protein NorB;locus_tag=GCA000144955_02474;product=Quinolone resistance protein NorB;gene=proP;Parent=GCA000144955_02474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000381264.1,SO:0001217,UniParc:UPI0001DDAAC5,UniRef:UniRef100_UPI0001DDAAC5,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_A0AAJ4YV50
contig_1	Pyrodigal	gene	2520992	2521687	.	-	.	ID=GCA000144955_02475_gene;locus_tag=GCA000144955_02475;gene=opuBB
contig_1	Pyrodigal	CDS	2520992	2521687	.	-	0	ID=GCA000144955_02475;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000144955_02475;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000144955_02475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000398941.1,SO:0001217,UniParc:UPI0000054BC8,UniRef:UniRef100_Q2FVH1,UniRef:UniRef50_P39775,UniRef:UniRef90_A0A0U1MTP7
contig_1	Pyrodigal	gene	2521687	2522628	.	-	.	ID=GCA000144955_02476_gene;locus_tag=GCA000144955_02476;gene=osmF
contig_1	Pyrodigal	CDS	2521687	2522628	.	-	0	ID=GCA000144955_02476;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);locus_tag=GCA000144955_02476;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);gene=osmF;Parent=GCA000144955_02476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000721556.1,SO:0001217,UniParc:UPI0001DD91BD,UniRef:UniRef100_A0A2S6D1X8,UniRef:UniRef50_Q45462,UniRef:UniRef90_A0A7U7JR79
contig_1	Pyrodigal	gene	2522645	2523280	.	-	.	ID=GCA000144955_02477_gene;locus_tag=GCA000144955_02477;gene=opuBB
contig_1	Pyrodigal	CDS	2522645	2523280	.	-	0	ID=GCA000144955_02477;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000144955_02477;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000144955_02477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000569115.1,SO:0001217,UniParc:UPI0001DD91BE,UniRef:UniRef100_UPI0001DD91BE,UniRef:UniRef50_O34878,UniRef:UniRef90_A0A0U1MSP2
contig_1	Pyrodigal	gene	2523277	2524503	.	-	.	ID=GCA000144955_02478_gene;locus_tag=GCA000144955_02478;gene=opuBA
contig_1	Pyrodigal	CDS	2523277	2524503	.	-	0	ID=GCA000144955_02478;Name=Quaternary amine transport ATP-binding protein;locus_tag=GCA000144955_02478;product=Quaternary amine transport ATP-binding protein;gene=opuBA;Parent=GCA000144955_02478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000948968.1,SO:0001217,UniParc:UPI0001DD91BF,UniRef:UniRef100_UPI0001DD91BF,UniRef:UniRef50_Q45460,UniRef:UniRef90_A0A7U7JRH5
contig_1	Pyrodigal	gene	2525173	2525772	.	-	.	ID=GCA000144955_02479_gene;locus_tag=GCA000144955_02479;gene=ydeI
contig_1	Pyrodigal	CDS	2525173	2525772	.	-	0	ID=GCA000144955_02479;Name=YdhG-like domain-containing protein;locus_tag=GCA000144955_02479;product=YdhG-like domain-containing protein;gene=ydeI;Parent=GCA000144955_02479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4430,COG:S,RefSeq:WP_001291522.1,SO:0001217,UniParc:UPI0001DD91C0,UniRef:UniRef100_UPI0001DD91C0,UniRef:UniRef50_A0A1E9A998,UniRef:UniRef90_A0A7U7JR81
contig_1	Pyrodigal	gene	2525952	2527589	.	+	.	ID=GCA000144955_02480_gene;locus_tag=GCA000144955_02480;gene=potE
contig_1	Pyrodigal	CDS	2525952	2527589	.	+	0	ID=GCA000144955_02480;Name=APC family permease;locus_tag=GCA000144955_02480;product=APC family permease;gene=potE;Parent=GCA000144955_02480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_001030699.1,SO:0001217,UniParc:UPI0001DD91C1,UniRef:UniRef100_UPI0001DD91C1,UniRef:UniRef50_A0A4U9TDF7,UniRef:UniRef90_Q2FVG4
contig_1	Infernal	gene	2527727	2527936	.	-	.	ID=GCA000144955_02481_gene;locus_tag=GCA000144955_02481;gene=S35
contig_1	Infernal	ncRNA	2527727	2527936	1.4e-21	-	.	ID=GCA000144955_02481;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000144955_02481;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000144955_02481_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2528079	2529431	.	+	.	ID=GCA000144955_02482_gene;locus_tag=GCA000144955_02482;gene=pnbA
contig_1	Pyrodigal	CDS	2528079	2529431	.	+	0	ID=GCA000144955_02482;Name=Carboxylic ester hydrolase;locus_tag=GCA000144955_02482;product=Carboxylic ester hydrolase;gene=pnbA;Parent=GCA000144955_02482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2272,COG:I,RefSeq:WP_000700913.1,SO:0001217,UniParc:UPI0001DD91C2,UniRef:UniRef100_UPI0001DD91C2,UniRef:UniRef50_A0A0H2WZR3,UniRef:UniRef90_A0A0H2WZR3
contig_1	Pyrodigal	gene	2529493	2530680	.	-	.	ID=GCA000144955_02483_gene;locus_tag=GCA000144955_02483;gene=araJ
contig_1	Pyrodigal	CDS	2529493	2530680	.	-	0	ID=GCA000144955_02483;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_02483;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000144955_02483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000026189.1,SO:0001217,UniParc:UPI00000CA9C5,UniRef:UniRef100_Q9F0Z3,UniRef:UniRef50_Q2FVG2,UniRef:UniRef90_Q2FVG2
contig_1	Pyrodigal	gene	2531074	2531850	.	-	.	ID=GCA000144955_02484_gene;locus_tag=GCA000144955_02484;gene=fetB
contig_1	Pyrodigal	CDS	2531074	2531850	.	-	0	ID=GCA000144955_02484;Name=ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000144955_02484;product=ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=fetB;Parent=GCA000144955_02484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0390,COG:P,KEGG:K02069,RefSeq:WP_000072151.1,SO:0001217,UniParc:UPI0001C0BC67,UniRef:UniRef100_A0A1D4QUU7,UniRef:UniRef50_A0A0D0SFV4,UniRef:UniRef90_A0A3A3AVI9
contig_1	Pyrodigal	gene	2531843	2532505	.	-	.	ID=GCA000144955_02485_gene;locus_tag=GCA000144955_02485
contig_1	Pyrodigal	CDS	2531843	2532505	.	-	0	ID=GCA000144955_02485;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000144955_02485;product=ATP-binding cassette domain-containing protein;Parent=GCA000144955_02485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000923521.1,SO:0001217,UniParc:UPI0001DD91C3,UniRef:UniRef100_UPI0001DD91C3,UniRef:UniRef50_A0A0D0SPN6,UniRef:UniRef90_A0A6B1RL06
contig_1	Pyrodigal	gene	2532753	2533829	.	-	.	ID=GCA000144955_02486_gene;locus_tag=GCA000144955_02486;gene=frvX
contig_1	Pyrodigal	CDS	2532753	2533829	.	-	0	ID=GCA000144955_02486;Name=Endoglucanase M;locus_tag=GCA000144955_02486;product=Endoglucanase M;gene=frvX;Parent=GCA000144955_02486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001076671.1,SO:0001217,UniParc:UPI00000D9FC8,UniRef:UniRef100_Q2FVF9,UniRef:UniRef50_A0A390YIZ1,UniRef:UniRef90_A0A390YIZ1
contig_1	Pyrodigal	gene	2534184	2534450	.	-	.	ID=GCA000144955_02487_gene;locus_tag=GCA000144955_02487
contig_1	Pyrodigal	CDS	2534184	2534450	.	-	0	ID=GCA000144955_02487;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000144955_02487;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000144955_02487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000074048.1,SO:0001217,UniParc:UPI00000D9FC9,UniRef:UniRef100_Q2FVF8,UniRef:UniRef50_Q2FVF8,UniRef:UniRef90_Q2FVF8
contig_1	Pyrodigal	gene	2534450	2534707	.	-	.	ID=GCA000144955_02488_gene;locus_tag=GCA000144955_02488;gene=stbD
contig_1	Pyrodigal	CDS	2534450	2534707	.	-	0	ID=GCA000144955_02488;Name=Antitoxin;locus_tag=GCA000144955_02488;product=Antitoxin;gene=stbD;Parent=GCA000144955_02488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000587616.1,SO:0001217,UniParc:UPI0000054859,UniRef:UniRef100_Q2FVF7,UniRef:UniRef50_A0A8G2HZW6,UniRef:UniRef90_A0A8G2HZW6
contig_1	Pyrodigal	gene	2535066	2535521	.	+	.	ID=GCA000144955_02489_gene;locus_tag=GCA000144955_02489;gene=yehR
contig_1	Pyrodigal	CDS	2535066	2535521	.	+	0	ID=GCA000144955_02489;Name=DUF1307 domain-containing protein;locus_tag=GCA000144955_02489;product=DUF1307 domain-containing protein;gene=yehR;Parent=GCA000144955_02489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4808,COG:S,RefSeq:WP_000732087.1,SO:0001217,UniParc:UPI0001DD91C4,UniRef:UniRef100_UPI0001DD91C4,UniRef:UniRef50_A0A2T4PYL1,UniRef:UniRef90_Q2FVF5
contig_1	Pyrodigal	gene	2535689	2537266	.	-	.	ID=GCA000144955_02490_gene;locus_tag=GCA000144955_02490;gene=gltB2
contig_1	Pyrodigal	CDS	2535689	2537266	.	-	0	ID=GCA000144955_02490;Name=FMN-binding glutamate synthase family protein;locus_tag=GCA000144955_02490;product=FMN-binding glutamate synthase family protein;gene=gltB2;Parent=GCA000144955_02490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0069,COG:E,RefSeq:WP_000143503.1,SO:0001217,UniParc:UPI00004B5CD7,UniRef:UniRef100_Q2FVF4,UniRef:UniRef50_A0A2S6D1V6,UniRef:UniRef90_A0A2S6D1V6
contig_1	Pyrodigal	gene	2537461	2538210	.	+	.	ID=GCA000144955_02491_gene;locus_tag=GCA000144955_02491;gene=lnsB
contig_1	Pyrodigal	CDS	2537461	2538210	.	+	0	ID=GCA000144955_02491;Name=CPBP family lipoprotein N-acylation protein LnsB;locus_tag=GCA000144955_02491;product=CPBP family lipoprotein N-acylation protein LnsB;gene=lnsB;Parent=GCA000144955_02491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27958,RefSeq:WP_000072467.1,SO:0001217,UniParc:UPI0001DD91C5,UniRef:UniRef100_UPI0001DD91C5,UniRef:UniRef50_Q2FVF3,UniRef:UniRef90_Q2FVF3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2538432	2539625	.	-	.	ID=GCA000144955_02492_gene;locus_tag=GCA000144955_02492;gene=cntE
contig_1	Pyrodigal	CDS	2538432	2539625	.	-	0	ID=GCA000144955_02492;Name=staphylopine family metallophore export MFS transporter CntE;locus_tag=GCA000144955_02492;product=staphylopine family metallophore export MFS transporter CntE;Dbxref=GO:0005886,GO:0022857;gene=cntE;Parent=GCA000144955_02492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000675410.1,SO:0001217,UniParc:UPI0001DD91C6,UniRef:UniRef100_UPI0001DD91C6,UniRef:UniRef50_A0A0H3JTK0,UniRef:UniRef90_A0A0H3JTK0
contig_1	Pyrodigal	gene	2539637	2540386	.	-	.	ID=GCA000144955_02493_gene;locus_tag=GCA000144955_02493;gene=cntF
contig_1	Pyrodigal	CDS	2539637	2540386	.	-	0	ID=GCA000144955_02493;Name=Metal-staphylopine import system ATP-binding protein CntF;locus_tag=GCA000144955_02493;product=Metal-staphylopine import system ATP-binding protein CntF;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006829,GO:0015675,GO:0016887;gene=cntF;Parent=GCA000144955_02493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000590515.1,SO:0001217,UniParc:UPI00000D9FCF,UniRef:UniRef100_A0A7Z7W2K3,UniRef:UniRef50_Q2FVF1,UniRef:UniRef90_Q2FVF1;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2540379	2541194	.	-	.	ID=GCA000144955_02494_gene;locus_tag=GCA000144955_02494;gene=cntD
contig_1	Pyrodigal	CDS	2540379	2541194	.	-	0	ID=GCA000144955_02494;Name=staphylopine uptake ABC transporter ATP-binding protein CntD;locus_tag=GCA000144955_02494;product=staphylopine uptake ABC transporter ATP-binding protein CntD;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0016887;gene=cntD;Parent=GCA000144955_02494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000173859.1,SO:0001217,UniParc:UPI0001DD91C7,UniRef:UniRef100_UPI0001DD91C7,UniRef:UniRef50_Q2FVF0,UniRef:UniRef90_Q2FVF0;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2541194	2542060	.	-	.	ID=GCA000144955_02495_gene;locus_tag=GCA000144955_02495;gene=cntC
contig_1	Pyrodigal	CDS	2541194	2542060	.	-	0	ID=GCA000144955_02495;Name=staphylopine uptake ABC transporter permease subunit CntC;locus_tag=GCA000144955_02495;product=staphylopine uptake ABC transporter permease subunit CntC;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675;gene=cntC;Parent=GCA000144955_02495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000584769.1,SO:0001217,UniParc:UPI0001DD91C8,UniRef:UniRef100_UPI0001DD91C8,UniRef:UniRef50_Q2FVE9,UniRef:UniRef90_Q2FVE9
contig_1	Pyrodigal	gene	2542057	2542992	.	-	.	ID=GCA000144955_02496_gene;locus_tag=GCA000144955_02496;gene=opp1B
contig_1	Pyrodigal	CDS	2542057	2542992	.	-	0	ID=GCA000144955_02496;Name=nickel/cobalt ABC transporter permease;locus_tag=GCA000144955_02496;product=nickel/cobalt ABC transporter permease;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0043190,GO:0140359;gene=opp1B;Parent=GCA000144955_02496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000472246.1,SO:0001217,UniParc:UPI00000D9FD1,UniRef:UniRef100_A0A641A701,UniRef:UniRef50_Q2FVE8,UniRef:UniRef90_Q2FVE8
contig_1	Pyrodigal	gene	2543005	2544603	.	-	.	ID=GCA000144955_02497_gene;locus_tag=GCA000144955_02497;gene=cntA
contig_1	Pyrodigal	CDS	2543005	2544603	.	-	0	ID=GCA000144955_02497;Name=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;locus_tag=GCA000144955_02497;product=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;Dbxref=GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0015833,GO:0016151,GO:0020037,GO:0030288,GO:0043190,GO:1904680;gene=cntA;Parent=GCA000144955_02497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001229077,BlastRules:WP_002496571,COG:COG0747,COG:E,RefSeq:WP_001229069.1,SO:0001217,UniParc:UPI0001DD91C9,UniRef:UniRef100_UPI0001DD91C9,UniRef:UniRef50_Q2FVE7,UniRef:UniRef90_Q2FVE7
contig_1	Pyrodigal	gene	2544743	2546047	.	-	.	ID=GCA000144955_02498_gene;locus_tag=GCA000144955_02498;gene=cntM
contig_1	Pyrodigal	CDS	2544743	2546047	.	-	0	ID=GCA000144955_02498;Name=staphylopine dehydrogenase CntM;locus_tag=GCA000144955_02498;product=staphylopine dehydrogenase CntM;Dbxref=GO:0016491;gene=cntM;Parent=GCA000144955_02498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_096659686,COG:COG4408,COG:S,KEGG:K23122,RefSeq:WP_000040605.1,SO:0001217,UniParc:UPI0001DD91CA,UniRef:UniRef100_UPI0001DD91CA,UniRef:UniRef50_A0A0H3JT80,UniRef:UniRef90_A0A0H3JT80;ec_number=1.5.1.52
contig_1	Pyrodigal	gene	2546040	2546858	.	-	.	ID=GCA000144955_02499_gene;locus_tag=GCA000144955_02499;gene=cntL
contig_1	Pyrodigal	CDS	2546040	2546858	.	-	0	ID=GCA000144955_02499;Name=D-histidine (S)-2-aminobutanoyltransferase CntL;locus_tag=GCA000144955_02499;product=D-histidine (S)-2-aminobutanoyltransferase CntL;Dbxref=GO:0030410,GO:0030418;gene=cntL;Parent=GCA000144955_02499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058843,RefSeq:WP_001058841.1,SO:0001217,UniParc:UPI0001DD91CB,UniRef:UniRef100_UPI0001DD91CB,UniRef:UniRef50_A0A0H3JXA8,UniRef:UniRef90_A0A0H3JXA8;ec_number=2.5.1.152
contig_1	Pyrodigal	gene	2546869	2547690	.	-	.	ID=GCA000144955_02500_gene;locus_tag=GCA000144955_02500;gene=cntK
contig_1	Pyrodigal	CDS	2546869	2547690	.	-	0	ID=GCA000144955_02500;Name=histidine racemase CntK;locus_tag=GCA000144955_02500;product=histidine racemase CntK;Dbxref=GO:0016853;gene=cntK;Parent=GCA000144955_02500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01780,RefSeq:WP_001081695.1,SO:0001217,UniParc:UPI0001DD91CC,UniRef:UniRef100_UPI0001DD91CC,UniRef:UniRef50_A0A0H3JU78,UniRef:UniRef90_A0A0H3JU78;ec_number=5.1.1.24
contig_1	Pyrodigal	gene	2548490	2548855	.	-	.	ID=GCA000144955_02501_gene;locus_tag=GCA000144955_02501
contig_1	Pyrodigal	CDS	2548490	2548855	.	-	0	ID=GCA000144955_02501;Name=Genomic island nu Sa alpha2;locus_tag=GCA000144955_02501;product=Genomic island nu Sa alpha2;Parent=GCA000144955_02501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000931252.1,SO:0001217,UniParc:UPI0001DD91CD,UniRef:UniRef100_UPI0012B00701,UniRef:UniRef50_Q2FVE3,UniRef:UniRef90_Q2FVE3
contig_1	Pyrodigal	gene	2549119	2549937	.	-	.	ID=GCA000144955_02502_gene;locus_tag=GCA000144955_02502
contig_1	Pyrodigal	CDS	2549119	2549937	.	-	0	ID=GCA000144955_02502;Name=SDR family oxidoreductase;locus_tag=GCA000144955_02502;product=SDR family oxidoreductase;Parent=GCA000144955_02502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824956.1,SO:0001217,UniParc:UPI0001DD91CE,UniRef:UniRef100_UPI0001DD91CE,UniRef:UniRef50_P46331,UniRef:UniRef90_A0A6B5BBF4
contig_1	Pyrodigal	gene	2550173	2551711	.	+	.	ID=GCA000144955_02503_gene;locus_tag=GCA000144955_02503;gene=abgT
contig_1	Pyrodigal	CDS	2550173	2551711	.	+	0	ID=GCA000144955_02503;Name=Transporter%2C putative;locus_tag=GCA000144955_02503;product=Transporter%2C putative;gene=abgT;Parent=GCA000144955_02503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2978,COG:H,KEGG:K12942,RefSeq:WP_000200987.1,SO:0001217,UniParc:UPI0001DD91CF,UniRef:UniRef100_UPI0001DD91CF,UniRef:UniRef50_Q4L8X7,UniRef:UniRef90_Q2FVE1
contig_1	Pyrodigal	gene	2551823	2552245	.	-	.	ID=GCA000144955_02504_gene;locus_tag=GCA000144955_02504;gene=yciW
contig_1	Pyrodigal	CDS	2551823	2552245	.	-	0	ID=GCA000144955_02504;Name=Carboxymuconolactone decarboxylase-like domain-containing protein;locus_tag=GCA000144955_02504;product=Carboxymuconolactone decarboxylase-like domain-containing protein;gene=yciW;Parent=GCA000144955_02504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2128,COG:P,RefSeq:WP_001146762.1,SO:0001217,UniParc:UPI00000D9FD7,UniRef:UniRef100_A0A7Z7R1J0,UniRef:UniRef50_Q2FVE0,UniRef:UniRef90_Q2FVE0
contig_1	Pyrodigal	gene	2552697	2553116	.	-	.	ID=GCA000144955_02505_gene;locus_tag=GCA000144955_02505
contig_1	Pyrodigal	CDS	2552697	2553116	.	-	0	ID=GCA000144955_02505;Name=DUF1433 domain-containing protein;locus_tag=GCA000144955_02505;product=DUF1433 domain-containing protein;Parent=GCA000144955_02505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038224.1,SO:0001217,UniParc:UPI0001DD91D0,UniRef:UniRef100_UPI0001DD91D0,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_A0AA40JKI8
contig_1	Pyrodigal	gene	2553588	2554010	.	-	.	ID=GCA000144955_02506_gene;locus_tag=GCA000144955_02506
contig_1	Pyrodigal	CDS	2553588	2554010	.	-	0	ID=GCA000144955_02506;Name=DUF1433 domain-containing protein;locus_tag=GCA000144955_02506;product=DUF1433 domain-containing protein;Parent=GCA000144955_02506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000162195.1,SO:0001217,UniParc:UPI0001DD91D1,UniRef:UniRef100_UPI0001DD91D1,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_Q2FVD6
contig_1	Pyrodigal	gene	2554262	2554957	.	-	.	ID=GCA000144955_02507_gene;locus_tag=GCA000144955_02507;gene=ydfG
contig_1	Pyrodigal	CDS	2554262	2554957	.	-	0	ID=GCA000144955_02507;Name=putative oxidoreductase SAOUHSC_02778;locus_tag=GCA000144955_02507;product=putative oxidoreductase SAOUHSC_02778;Dbxref=GO:0016491;gene=ydfG;Parent=GCA000144955_02507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_000217470.1,SO:0001217,UniParc:UPI0001DD91D2,UniRef:UniRef100_UPI0001DD91D2,UniRef:UniRef50_Q2FVD5,UniRef:UniRef90_Q2FVD5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2555257	2555538	.	+	.	ID=GCA000144955_02508_gene;locus_tag=GCA000144955_02508
contig_1	Pyrodigal	CDS	2555257	2555538	.	+	0	ID=GCA000144955_02508;Name=DUF1413 domain-containing protein;locus_tag=GCA000144955_02508;product=DUF1413 domain-containing protein;Parent=GCA000144955_02508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220932.1,SO:0001217,UniParc:UPI00003B1969,UniRef:UniRef100_A0A7Z7R0K8,UniRef:UniRef50_Q2FVD4,UniRef:UniRef90_Q2FVD4
contig_1	Pyrodigal	gene	2555798	2555989	.	-	.	ID=GCA000144955_02509_gene;locus_tag=GCA000144955_02509
contig_1	Pyrodigal	CDS	2555798	2555989	.	-	0	ID=GCA000144955_02509;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_02509;product=HTH cro/C1-type domain-containing protein;Parent=GCA000144955_02509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224379.1,SO:0001217,UniParc:UPI00000D788C,UniRef:UniRef100_Q2FVD2,UniRef:UniRef50_S2YA76,UniRef:UniRef90_Q2FVD2
contig_1	Infernal	gene	2556200	2556274	.	+	.	ID=GCA000144955_02510_gene;locus_tag=GCA000144955_02510;gene=sau-19
contig_1	Infernal	ncRNA	2556200	2556274	9.8e-20	+	.	ID=GCA000144955_02510;Name=Staphylococcus sRNA sau-19;locus_tag=GCA000144955_02510;product=Staphylococcus sRNA sau-19;Dbxref=RFAM:RF02386;Parent=GCA000144955_02510_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02386
contig_1	Pyrodigal	gene	2556550	2557344	.	-	.	ID=GCA000144955_02511_gene;locus_tag=GCA000144955_02511
contig_1	Pyrodigal	CDS	2556550	2557344	.	-	0	ID=GCA000144955_02511;Name=Tandem-type lipoprotein;locus_tag=GCA000144955_02511;product=Tandem-type lipoprotein;Parent=GCA000144955_02511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_044026055.1,SO:0001217,UniParc:UPI0005C78747,UniRef:UniRef100_UPI0005C78747,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_A0AA40JKW1
contig_1	Pyrodigal	gene	2557880	2558167	.	-	.	ID=GCA000144955_02512_gene;locus_tag=GCA000144955_02512
contig_1	Pyrodigal	CDS	2557880	2558167	.	-	0	ID=GCA000144955_02512;Name=hypothetical protein;locus_tag=GCA000144955_02512;product=hypothetical protein;Parent=GCA000144955_02512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000521958.1,SO:0001217,UniParc:UPI00004B5CE3,UniRef:UniRef100_Q2FVC9,UniRef:UniRef50_Q2FVC9,UniRef:UniRef90_Q2FVC9
contig_1	Pyrodigal	gene	2558170	2558496	.	-	.	ID=GCA000144955_02513_gene;locus_tag=GCA000144955_02513
contig_1	Pyrodigal	CDS	2558170	2558496	.	-	0	ID=GCA000144955_02513;Name=Cytosolic protein;locus_tag=GCA000144955_02513;product=Cytosolic protein;Parent=GCA000144955_02513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495501.1,SO:0001217,UniParc:UPI0001DD91D4,UniRef:UniRef100_A0A0U1MT40,UniRef:UniRef50_Q2FVC8,UniRef:UniRef90_Q2FVC8
contig_1	Pyrodigal	gene	2558496	2559821	.	-	.	ID=GCA000144955_02514_gene;locus_tag=GCA000144955_02514
contig_1	Pyrodigal	CDS	2558496	2559821	.	-	0	ID=GCA000144955_02514;Name=Cytosolic protein;locus_tag=GCA000144955_02514;product=Cytosolic protein;Parent=GCA000144955_02514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000056386.1,SO:0001217,UniParc:UPI0001DD91D5,UniRef:UniRef100_UPI0001DD91D5,UniRef:UniRef50_A0A1S1GXE0,UniRef:UniRef90_A0A6G4JDZ3
contig_1	Pyrodigal	gene	2559818	2560603	.	-	.	ID=GCA000144955_02515_gene;locus_tag=GCA000144955_02515
contig_1	Pyrodigal	CDS	2559818	2560603	.	-	0	ID=GCA000144955_02515;Name=Tandem-type lipoprotein;locus_tag=GCA000144955_02515;product=Tandem-type lipoprotein;Parent=GCA000144955_02515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000581882.1,SO:0001217,UniParc:UPI0001DD91D6,UniRef:UniRef100_UPI0001DD91D6,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_A0A6B5DM14
contig_1	Pyrodigal	gene	2560847	2561623	.	-	.	ID=GCA000144955_02516_gene;locus_tag=GCA000144955_02516
contig_1	Pyrodigal	CDS	2560847	2561623	.	-	0	ID=GCA000144955_02516;Name=putative lipoprotein SAUSA300_2430;locus_tag=GCA000144955_02516;product=putative lipoprotein SAUSA300_2430;Dbxref=GO:0005886;Parent=GCA000144955_02516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000972658.1,SO:0001217,UniParc:UPI0002E61282,UniRef:UniRef100_UPI0002E61282,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_Q2FVC4
contig_1	Pyrodigal	gene	2561926	2564787	.	-	.	ID=GCA000144955_02517_gene;locus_tag=GCA000144955_02517
contig_1	Pyrodigal	CDS	2561926	2564787	.	-	0	ID=GCA000144955_02517;Name=DUF3427 domain-containing protein;locus_tag=GCA000144955_02517;product=DUF3427 domain-containing protein;Parent=GCA000144955_02517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088727.1,SO:0001217,UniParc:UPI0001DD9363,UniRef:UniRef100_UPI0001DD9363,UniRef:UniRef50_A0A380HJB7,UniRef:UniRef90_Q2FVC3
contig_1	Pyrodigal	gene	2564789	2565181	.	-	.	ID=GCA000144955_02518_gene;locus_tag=GCA000144955_02518;gene=mutT
contig_1	Pyrodigal	CDS	2564789	2565181	.	-	0	ID=GCA000144955_02518;Name=8-oxo-dGTP diphosphatase;locus_tag=GCA000144955_02518;product=8-oxo-dGTP diphosphatase;gene=mutT;Parent=GCA000144955_02518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000755948.1,SO:0001217,UniParc:UPI0001DD9364,UniRef:UniRef100_UPI0001DD9364,UniRef:UniRef50_A0A3A5KZ23,UniRef:UniRef90_A0A3A5KZ23
contig_1	Pyrodigal	gene	2565484	2567121	.	+	.	ID=GCA000144955_02519_gene;locus_tag=GCA000144955_02519;gene=pgcA
contig_1	Pyrodigal	CDS	2565484	2567121	.	+	0	ID=GCA000144955_02519;Name=Phosphoglucomutase;locus_tag=GCA000144955_02519;product=Phosphoglucomutase;Dbxref=GO:0000287,GO:0004614,GO:0006006,GO:0006166,GO:0008973,GO:0009246;gene=pgcA;Parent=GCA000144955_02519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,SO:0001217,UniRef:UniRef50_Q2FVC1,UniRef:UniRef90_Q2FVC1;ec_number=5.4.2.2
contig_1	Pyrodigal	gene	2567405	2567671	.	+	.	ID=GCA000144955_02520_gene;locus_tag=GCA000144955_02520
contig_1	Pyrodigal	CDS	2567405	2567671	.	+	0	ID=GCA000144955_02520;Name=Secreted protein;locus_tag=GCA000144955_02520;product=Secreted protein;Parent=GCA000144955_02520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678764.1,SO:0001217,UniParc:UPI000005487E,UniRef:UniRef100_Q2FVC0,UniRef:UniRef50_A0A2K4AFJ0,UniRef:UniRef90_A0A2K4AFJ0
contig_1	Pyrodigal	gene	2567815	2568123	.	+	.	ID=GCA000144955_02521_gene;locus_tag=GCA000144955_02521
contig_1	Pyrodigal	CDS	2567815	2568123	.	+	0	ID=GCA000144955_02521;Name=DUF3784 domain-containing protein;locus_tag=GCA000144955_02521;product=DUF3784 domain-containing protein;Parent=GCA000144955_02521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000217724.1,SO:0001217,UniParc:UPI0001DA23FA,UniRef:UniRef100_A0A6B5HD34,UniRef:UniRef50_Q2G2B5,UniRef:UniRef90_Q2G2B5
contig_1	Pyrodigal	gene	2568237	2569850	.	-	.	ID=GCA000144955_02522_gene;locus_tag=GCA000144955_02522
contig_1	Pyrodigal	CDS	2568237	2569850	.	-	0	ID=GCA000144955_02522;Name=Poly (Glycerol-phosphate) alpha-glucosyltransferase;locus_tag=GCA000144955_02522;product=Poly (Glycerol-phosphate) alpha-glucosyltransferase;Parent=GCA000144955_02522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000136920.1,SO:0001217,UniParc:UPI0001DD9366,UniRef:UniRef100_UPI0012450E5D,UniRef:UniRef50_Q4L3P3,UniRef:UniRef90_A0AAN1ZQT3
contig_1	Pyrodigal	gene	2569946	2573188	.	-	.	ID=GCA000144955_02523_gene;locus_tag=GCA000144955_02523
contig_1	Pyrodigal	CDS	2569946	2573188	.	-	0	ID=GCA000144955_02523;Name=YPDG domain-containing protein;locus_tag=GCA000144955_02523;product=YPDG domain-containing protein;Parent=GCA000144955_02523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_258091375.1,SO:0001217,UniParc:UPI0021584608,UniRef:UniRef100_UPI0021584608,UniRef:UniRef50_UPI0023639239,UniRef:UniRef90_UPI0022F3B307
contig_1	Pyrodigal	gene	2573227	2573889	.	-	.	ID=GCA000144955_02524_gene;locus_tag=GCA000144955_02524
contig_1	Pyrodigal	CDS	2573227	2573889	.	-	0	ID=GCA000144955_02524;Name=YSIRK-type signal peptide-containing protein;locus_tag=GCA000144955_02524;product=YSIRK-type signal peptide-containing protein;Parent=GCA000144955_02524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI000DAABB2E,UniRef:UniRef90_UPI000DAABB2E
contig_1	Pyrodigal	gene	2574147	2574497	.	-	.	ID=GCA000144955_02525_gene;locus_tag=GCA000144955_02525;gene=sarT
contig_1	Pyrodigal	CDS	2574147	2574497	.	-	0	ID=GCA000144955_02525;Name=Staphylococcal accessory regulator T%2C SarT;locus_tag=GCA000144955_02525;product=Staphylococcal accessory regulator T%2C SarT;gene=sarT;Parent=GCA000144955_02525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000359186.1,SO:0001217,UniParc:UPI0001DD9369,UniRef:UniRef100_UPI0001DD9369,UniRef:UniRef50_Q2G2B1,UniRef:UniRef90_A0AAN1ZQT6
contig_1	Pyrodigal	gene	2574847	2575593	.	+	.	ID=GCA000144955_02526_gene;locus_tag=GCA000144955_02526;gene=sarH1
contig_1	Pyrodigal	CDS	2574847	2575593	.	+	0	ID=GCA000144955_02526;Name=Staphylococcal accessory regulator A%2C SarH1;locus_tag=GCA000144955_02526;product=Staphylococcal accessory regulator A%2C SarH1;gene=sarH1;Parent=GCA000144955_02526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G1T7,UniRef:UniRef90_A0AAN1ZQR9
contig_1	Pyrodigal	gene	2575841	2576707	.	-	.	ID=GCA000144955_02527_gene;locus_tag=GCA000144955_02527;gene=galU
contig_1	Pyrodigal	CDS	2575841	2576707	.	-	0	ID=GCA000144955_02527;Name=UTP--glucose-1-phosphate uridylyltransferase GalU;locus_tag=GCA000144955_02527;product=UTP--glucose-1-phosphate uridylyltransferase GalU;Dbxref=GO:0003983,GO:0006011,GO:0009246;gene=galU;Parent=GCA000144955_02527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,RefSeq:WP_000721338.1,SO:0001217,UniParc:UPI0001DD936B,UniRef:UniRef100_UPI0001DD936B,UniRef:UniRef50_Q2G1T6,UniRef:UniRef90_Q2G1T6;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	2576887	2579706	.	-	.	ID=GCA000144955_02528_gene;locus_tag=GCA000144955_02528;gene=fnbB
contig_1	Pyrodigal	CDS	2576887	2579706	.	-	0	ID=GCA000144955_02528;Name=fibronectin-binding protein FnbB;locus_tag=GCA000144955_02528;product=fibronectin-binding protein FnbB;gene=fnbB;Parent=GCA000144955_02528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566815,RefSeq:WP_103262259.1,SO:0001217,UniParc:UPI000CD091E1,UniRef:UniRef100_UPI000CD091E1,UniRef:UniRef50_A0A390ZLD1,UniRef:UniRef90_UPI000DAA8CCB
contig_1	Pyrodigal	gene	2580388	2583471	.	-	.	ID=GCA000144955_02529_gene;locus_tag=GCA000144955_02529
contig_1	Pyrodigal	CDS	2580388	2583471	.	-	0	ID=GCA000144955_02529;Name=Fibronectin-binding protein A;locus_tag=GCA000144955_02529;product=Fibronectin-binding protein A;Parent=GCA000144955_02529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000794625.1,SO:0001217,UniParc:UPI0001DD936C,UniRef:UniRef100_UPI0001DD936C,UniRef:UniRef50_Q99RD2,UniRef:UniRef90_A0A224B4K8
contig_1	Pyrodigal	gene	2583940	2585298	.	-	.	ID=GCA000144955_02530_gene;locus_tag=GCA000144955_02530
contig_1	Pyrodigal	CDS	2583940	2585298	.	-	0	ID=GCA000144955_02530;Name=Gluconate permease;locus_tag=GCA000144955_02530;product=Gluconate permease;Parent=GCA000144955_02530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000481407.1,SO:0001217,UniParc:UPI0001DD936D,UniRef:UniRef100_UPI0001DD936D,UniRef:UniRef50_O31862,UniRef:UniRef90_A0A0U1MU69
contig_1	Pyrodigal	gene	2585415	2586968	.	-	.	ID=GCA000144955_02531_gene;locus_tag=GCA000144955_02531;gene=gntK
contig_1	Pyrodigal	CDS	2585415	2586968	.	-	0	ID=GCA000144955_02531;Name=gluconokinase;locus_tag=GCA000144955_02531;product=gluconokinase;Dbxref=GO:0009255,GO:0019521,GO:0046316;gene=gntK;Parent=GCA000144955_02531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K25031,RefSeq:WP_000876652.1,SO:0001217,UniParc:UPI0001DD936E,UniRef:UniRef100_UPI0001DD936E,UniRef:UniRef50_A0A1X1FDN6,UniRef:UniRef90_A0A077UL99;ec_number=2.7.1.12
contig_1	Pyrodigal	gene	2586992	2587672	.	-	.	ID=GCA000144955_02532_gene;locus_tag=GCA000144955_02532;gene=gntR
contig_1	Pyrodigal	CDS	2586992	2587672	.	-	0	ID=GCA000144955_02532;Name=FCD domain-containing protein;locus_tag=GCA000144955_02532;product=FCD domain-containing protein;gene=gntR;Parent=GCA000144955_02532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1802,COG:K,KEGG:K11476,RefSeq:WP_000990137.1,SO:0001217,UniParc:UPI0001DD936F,UniRef:UniRef100_A0AAW9XJL2,UniRef:UniRef50_A0A239YRW4,UniRef:UniRef90_A0A0U1MT80
contig_1	Pyrodigal	gene	2587826	2588590	.	-	.	ID=GCA000144955_02533_gene;locus_tag=GCA000144955_02533;gene=soxR
contig_1	Pyrodigal	CDS	2587826	2588590	.	-	0	ID=GCA000144955_02533;Name=HTH merR-type domain-containing protein;locus_tag=GCA000144955_02533;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000144955_02533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000074013.1,SO:0001217,UniParc:UPI0001DD9370,UniRef:UniRef100_UPI0001DD9370,UniRef:UniRef50_Q2G2L8,UniRef:UniRef90_Q2G2L8
contig_1	Pyrodigal	gene	2588755	2589447	.	-	.	ID=GCA000144955_02534_gene;locus_tag=GCA000144955_02534;gene=yjbM
contig_1	Pyrodigal	CDS	2588755	2589447	.	-	0	ID=GCA000144955_02534;Name=GTP pyrophosphokinase YwaC;locus_tag=GCA000144955_02534;product=GTP pyrophosphokinase YwaC;gene=yjbM;Parent=GCA000144955_02534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_000289136.1,SO:0001217,UniParc:UPI000005488E,UniRef:UniRef100_Q2G2L7,UniRef:UniRef50_A0A240A5W9,UniRef:UniRef90_A0A7U7JRL0
contig_1	Pyrodigal	gene	2589678	2590094	.	-	.	ID=GCA000144955_02535_gene;locus_tag=GCA000144955_02535;gene=ydaT
contig_1	Pyrodigal	CDS	2589678	2590094	.	-	0	ID=GCA000144955_02535;Name=DUF2188 domain-containing protein;locus_tag=GCA000144955_02535;product=DUF2188 domain-containing protein;gene=ydaT;Parent=GCA000144955_02535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4876,COG:S,RefSeq:WP_001117055.1,SO:0001217,UniParc:UPI0001DD9371,UniRef:UniRef100_UPI0001DD9371,UniRef:UniRef50_Q2G2L6,UniRef:UniRef90_Q2G2L6
contig_1	Pyrodigal	gene	2590233	2592056	.	-	.	ID=GCA000144955_02536_gene;locus_tag=GCA000144955_02536;gene=yccC
contig_1	Pyrodigal	CDS	2590233	2592056	.	-	0	ID=GCA000144955_02536;Name=Integral membrane bound transporter domain-containing protein;locus_tag=GCA000144955_02536;product=Integral membrane bound transporter domain-containing protein;gene=yccC;Parent=GCA000144955_02536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_000586379.1,SO:0001217,UniParc:UPI0001DD9372,UniRef:UniRef100_UPI0001DD9372,UniRef:UniRef50_A0A853V3T2,UniRef:UniRef90_A0A0H3JXE4
contig_1	Pyrodigal	gene	2592568	2592771	.	-	.	ID=GCA000144955_02537_gene;locus_tag=GCA000144955_02537
contig_1	Pyrodigal	CDS	2592568	2592771	.	-	0	ID=GCA000144955_02537;Name=Doubtful CDS;locus_tag=GCA000144955_02537;product=Doubtful CDS;Parent=GCA000144955_02537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011382393.1,SO:0001217,UniParc:UPI00005FE7F4,UniRef:UniRef100_A0A2S6D252,UniRef:UniRef50_A0A853V0K0,UniRef:UniRef90_A0A2S6D252
contig_1	Pyrodigal	gene	2592967	2594244	.	-	.	ID=GCA000144955_02538_gene;locus_tag=GCA000144955_02538;gene=uhpC
contig_1	Pyrodigal	CDS	2592967	2594244	.	-	0	ID=GCA000144955_02538;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_02538;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=uhpC;Parent=GCA000144955_02538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_000660709.1,SO:0001217,UniParc:UPI0000054892,UniRef:UniRef100_Q2FVB9,UniRef:UniRef50_Q2FVB9,UniRef:UniRef90_Q2FVB9
contig_1	Pyrodigal	gene	2594791	2595402	.	+	.	ID=GCA000144955_02539_gene;locus_tag=GCA000144955_02539;gene=uptA
contig_1	Pyrodigal	CDS	2594791	2595402	.	+	0	ID=GCA000144955_02539;Name=Undecaprenyl phosphate transporter A;locus_tag=GCA000144955_02539;product=Undecaprenyl phosphate transporter A;Dbxref=GO:0005886,GO:0071555;gene=uptA;Parent=GCA000144955_02539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000435044.1,SO:0001217,UniParc:UPI0000054893,UniRef:UniRef100_Q2FVB8,UniRef:UniRef50_Q2FVB8,UniRef:UniRef90_Q2FVB8
contig_1	Pyrodigal	gene	2595499	2596662	.	-	.	ID=GCA000144955_02540_gene;locus_tag=GCA000144955_02540
contig_1	Pyrodigal	CDS	2595499	2596662	.	-	0	ID=GCA000144955_02540;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000144955_02540;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000144955_02540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000185197.1,SO:0001217,UniParc:UPI0001DD9374,UniRef:UniRef100_UPI0001DD9374,UniRef:UniRef50_Q2FVB6,UniRef:UniRef90_Q2FVB6
contig_1	Pyrodigal	gene	2596655	2597119	.	-	.	ID=GCA000144955_02541_gene;locus_tag=GCA000144955_02541;gene=marR
contig_1	Pyrodigal	CDS	2596655	2597119	.	-	0	ID=GCA000144955_02541;Name=MarR family winged helix-turn-helix transcriptional regulator;locus_tag=GCA000144955_02541;product=MarR family winged helix-turn-helix transcriptional regulator;gene=marR;Parent=GCA000144955_02541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FVB5,UniRef:UniRef90_UPI000BB38C67
contig_1	Pyrodigal	gene	2597485	2598180	.	+	.	ID=GCA000144955_02542_gene;locus_tag=GCA000144955_02542;gene=rbbA
contig_1	Pyrodigal	CDS	2597485	2598180	.	+	0	ID=GCA000144955_02542;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_02542;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000144955_02542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000383665.1,SO:0001217,UniParc:UPI0001DD9376,UniRef:UniRef100_UPI0001DD9376,UniRef:UniRef50_Q2FVB4,UniRef:UniRef90_Q2FVB4
contig_1	Pyrodigal	gene	2598182	2598946	.	+	.	ID=GCA000144955_02543_gene;locus_tag=GCA000144955_02543
contig_1	Pyrodigal	CDS	2598182	2598946	.	+	0	ID=GCA000144955_02543;Name=putative membrane spanning protein;locus_tag=GCA000144955_02543;product=putative membrane spanning protein;Parent=GCA000144955_02543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000536970.1,SO:0001217,UniParc:UPI0001DD9377,UniRef:UniRef100_UPI0022FD7390,UniRef:UniRef50_K9AVH9,UniRef:UniRef90_Q53764
contig_1	Pyrodigal	gene	2599327	2601291	.	+	.	ID=GCA000144955_02544_gene;locus_tag=GCA000144955_02544;gene=fbp
contig_1	Pyrodigal	CDS	2599327	2601291	.	+	0	ID=GCA000144955_02544;Name=Fructose-1%2C6-bisphosphatase class 3;locus_tag=GCA000144955_02544;product=Fructose-1%2C6-bisphosphatase class 3;Dbxref=GO:0006094,GO:0042132;gene=fbp;Parent=GCA000144955_02544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3855,COG:G,KEGG:K04041,RefSeq:WP_000192173.1,SO:0001217,UniParc:UPI00000D9FF1,UniRef:UniRef100_Q8NUT7,UniRef:UniRef50_Q2FVB2,UniRef:UniRef90_Q2FVB2;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	2601640	2602719	.	+	.	ID=GCA000144955_02545_gene;locus_tag=GCA000144955_02545;gene=ykvI
contig_1	Pyrodigal	CDS	2601640	2602719	.	+	0	ID=GCA000144955_02545;Name=Branched-chain amino acid transport system carrier protein;locus_tag=GCA000144955_02545;product=Branched-chain amino acid transport system carrier protein;gene=ykvI;Parent=GCA000144955_02545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_044026059.1,SO:0001217,UniParc:UPI000307E3A6,UniRef:UniRef100_UPI000307E3A6,UniRef:UniRef50_Q2FVB0,UniRef:UniRef90_Q2FVB0
contig_1	Pyrodigal	gene	2602824	2603417	.	-	.	ID=GCA000144955_02546_gene;locus_tag=GCA000144955_02546;gene=mhqD
contig_1	Pyrodigal	CDS	2602824	2603417	.	-	0	ID=GCA000144955_02546;Name=methylhydroquinone degradation carboxylesterase MhqD;locus_tag=GCA000144955_02546;product=methylhydroquinone degradation carboxylesterase MhqD;gene=mhqD;Parent=GCA000144955_02546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0400,COG:R,RefSeq:WP_000400022.1,SO:0001217,UniParc:UPI0001DD9379,UniRef:UniRef100_UPI0001DD9379,UniRef:UniRef50_Q2FVA9,UniRef:UniRef90_Q2FVA9
contig_1	Pyrodigal	gene	2603448	2604407	.	-	.	ID=GCA000144955_02547_gene;locus_tag=GCA000144955_02547;gene=gloA
contig_1	Pyrodigal	CDS	2603448	2604407	.	-	0	ID=GCA000144955_02547;Name=Dioxygenase;locus_tag=GCA000144955_02547;product=Dioxygenase;gene=gloA;Parent=GCA000144955_02547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,KEGG:K15975,RefSeq:WP_000183745.1,SO:0001217,UniParc:UPI0001DD937A,UniRef:UniRef100_UPI0001DD937A,UniRef:UniRef50_F4BQ31,UniRef:UniRef90_A0A3A5LQ32
contig_1	Pyrodigal	gene	2604485	2604919	.	-	.	ID=GCA000144955_02548_gene;locus_tag=GCA000144955_02548;gene=marR
contig_1	Pyrodigal	CDS	2604485	2604919	.	-	0	ID=GCA000144955_02548;Name=HTH marR-type domain-containing protein;locus_tag=GCA000144955_02548;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000144955_02548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000376239.1,SO:0001217,UniParc:UPI0001DD937B,UniRef:UniRef100_UPI0001DD937B,UniRef:UniRef50_Q2FVA7,UniRef:UniRef90_Q2FVA7
contig_1	Pyrodigal	gene	2605147	2605431	.	+	.	ID=GCA000144955_02549_gene;locus_tag=GCA000144955_02549;gene=yidJ
contig_1	Pyrodigal	CDS	2605147	2605431	.	+	0	ID=GCA000144955_02549;Name=Acetyltransferase;locus_tag=GCA000144955_02549;product=Acetyltransferase;gene=yidJ;Parent=GCA000144955_02549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_000067117.1,SO:0001217,UniParc:UPI0001DD937C,UniRef:UniRef100_UPI0001DD937C,UniRef:UniRef50_A0A1E9A8Y1,UniRef:UniRef90_A0A7U7JRC7
contig_1	Pyrodigal	gene	2605605	2606411	.	+	.	ID=GCA000144955_02550_gene;locus_tag=GCA000144955_02550;gene=catE
contig_1	Pyrodigal	CDS	2605605	2606411	.	+	0	ID=GCA000144955_02550;Name=Glyoxalase;locus_tag=GCA000144955_02550;product=Glyoxalase;gene=catE;Parent=GCA000144955_02550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_000863978.1,SO:0001217,UniParc:UPI0001DD937D,UniRef:UniRef100_UPI0001DD937D,UniRef:UniRef50_A0A6L9GI04,UniRef:UniRef90_A0A0S2JAB5
contig_1	Pyrodigal	gene	2606532	2607203	.	-	.	ID=GCA000144955_02551_gene;locus_tag=GCA000144955_02551;gene=nfnB
contig_1	Pyrodigal	CDS	2606532	2607203	.	-	0	ID=GCA000144955_02551;Name=Putative NAD(P)H nitroreductase SAB2397c;locus_tag=GCA000144955_02551;product=Putative NAD(P)H nitroreductase SAB2397c;Dbxref=GO:0005829,GO:0046256,GO:0046857;gene=nfnB;Parent=GCA000144955_02551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000069091.1,SO:0001217,UniParc:UPI0001DD937E,UniRef:UniRef100_UPI0001DD937E,UniRef:UniRef50_Q4A087,UniRef:UniRef90_Q2FVA4;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2607473	2608465	.	+	.	ID=GCA000144955_02552_gene;locus_tag=GCA000144955_02552;gene=ldhD
contig_1	Pyrodigal	CDS	2607473	2608465	.	+	0	ID=GCA000144955_02552;Name=D-lactate dehydrogenase;locus_tag=GCA000144955_02552;product=D-lactate dehydrogenase;Dbxref=GO:0008720,GO:0051287;gene=ldhD;Parent=GCA000144955_02552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000161536.1,SO:0001217,UniParc:UPI00000BC046,UniRef:UniRef100_Q5HD29,UniRef:UniRef50_P63940,UniRef:UniRef90_P63940;ec_number=1.1.1.28
contig_1	Pyrodigal	gene	2608710	2609510	.	-	.	ID=GCA000144955_02553_gene;locus_tag=GCA000144955_02553;gene=cof
contig_1	Pyrodigal	CDS	2608710	2609510	.	-	0	ID=GCA000144955_02553;Name=HAD family hydrolase;locus_tag=GCA000144955_02553;product=HAD family hydrolase;gene=cof;Parent=GCA000144955_02553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000237529.1,SO:0001217,UniParc:UPI0001DD9526,UniRef:UniRef100_UPI0001DD9526,UniRef:UniRef50_Q2FVA2,UniRef:UniRef90_Q2FVA2
contig_1	Pyrodigal	gene	2609831	2610466	.	+	.	ID=GCA000144955_02554_gene;locus_tag=GCA000144955_02554;gene=rbbA
contig_1	Pyrodigal	CDS	2609831	2610466	.	+	0	ID=GCA000144955_02554;Name=ABC transporter domain-containing protein;locus_tag=GCA000144955_02554;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000144955_02554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,KEGG:K16917,RefSeq:WP_000773925.1,SO:0001217,UniParc:UPI0001DD9527,UniRef:UniRef100_UPI0001DD9527,UniRef:UniRef50_Q2FVA1,UniRef:UniRef90_Q2FVA1
contig_1	Pyrodigal	gene	2610481	2611203	.	+	.	ID=GCA000144955_02555_gene;locus_tag=GCA000144955_02555
contig_1	Pyrodigal	CDS	2610481	2611203	.	+	0	ID=GCA000144955_02555;Name=Peptide ABC transporter permease;locus_tag=GCA000144955_02555;product=Peptide ABC transporter permease;Parent=GCA000144955_02555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q45592,UniRef:UniRef90_Q2FVA0
contig_1	Pyrodigal	gene	2611365	2611985	.	-	.	ID=GCA000144955_02556_gene;locus_tag=GCA000144955_02556;gene=srtA
contig_1	Pyrodigal	CDS	2611365	2611985	.	-	0	ID=GCA000144955_02556;Name=class A sortase SrtA;locus_tag=GCA000144955_02556;product=class A sortase SrtA;Dbxref=GO:0005886,GO:0006508,GO:0008234,GO:0046872;gene=srtA;Parent=GCA000144955_02556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000759361,COG:COG3764,COG:M,RefSeq:WP_000759359.1,SO:0001217,UniParc:UPI00000D9FF9,UniRef:UniRef100_A0A0M0Z384,UniRef:UniRef50_Q2FV99,UniRef:UniRef90_Q2FV99;ec_number=3.4.22.70
contig_1	Pyrodigal	gene	2612179	2612670	.	+	.	ID=GCA000144955_02557_gene;locus_tag=GCA000144955_02557;gene=mnaT
contig_1	Pyrodigal	CDS	2612179	2612670	.	+	0	ID=GCA000144955_02557;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02557;product=N-acetyltransferase domain-containing protein;gene=mnaT;Parent=GCA000144955_02557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1247,COG:E,KEGG:K24217,RefSeq:WP_000617342.1,SO:0001217,UniParc:UPI0001DD9529,UniRef:UniRef100_UPI0001DD9529,UniRef:UniRef50_Q2FV98,UniRef:UniRef90_Q2FV98;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2612819	2612989	.	-	.	ID=GCA000144955_02558_gene;locus_tag=GCA000144955_02558
contig_1	Pyrodigal	CDS	2612819	2612989	.	-	0	ID=GCA000144955_02558;Name=Mobilization protein;locus_tag=GCA000144955_02558;product=Mobilization protein;Parent=GCA000144955_02558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549802.1,SO:0001217,UniParc:UPI00000D9FFB,UniRef:UniRef100_Q2FV97,UniRef:UniRef50_A0A1D4MSI6,UniRef:UniRef90_Q2FV97
contig_1	Pyrodigal	gene	2613167	2614066	.	-	.	ID=GCA000144955_02559_gene;locus_tag=GCA000144955_02559;gene=sdaAA
contig_1	Pyrodigal	CDS	2613167	2614066	.	-	0	ID=GCA000144955_02559;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;locus_tag=GCA000144955_02559;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAA;Parent=GCA000144955_02559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000460421.1,SO:0001217,UniParc:UPI0000052255,UniRef:UniRef100_Q2FV95,UniRef:UniRef50_A0AAN1D8A6,UniRef:UniRef90_A0A2K4ALL6;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2614080	2614760	.	-	.	ID=GCA000144955_02560_gene;locus_tag=GCA000144955_02560;gene=sdaAB
contig_1	Pyrodigal	CDS	2614080	2614760	.	-	0	ID=GCA000144955_02560;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;locus_tag=GCA000144955_02560;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAB;Parent=GCA000144955_02560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_001140236.1,SO:0001217,UniParc:UPI0001DD952A,UniRef:UniRef100_UPI0001DD952A,UniRef:UniRef50_A0A0U1E0K5,UniRef:UniRef90_A0A2K4ALQ3;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2614763	2615806	.	-	.	ID=GCA000144955_02561_gene;locus_tag=GCA000144955_02561;gene=frwC
contig_1	Pyrodigal	CDS	2614763	2615806	.	-	0	ID=GCA000144955_02561;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000144955_02561;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000144955_02561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,RefSeq:WP_000353634.1,SO:0001217,UniParc:UPI00000548AA,UniRef:UniRef100_Q2FV93,UniRef:UniRef50_Q2FV93,UniRef:UniRef90_Q2FV93
contig_1	Pyrodigal	gene	2616355	2616558	.	+	.	ID=GCA000144955_02562_gene;locus_tag=GCA000144955_02562
contig_1	Pyrodigal	CDS	2616355	2616558	.	+	0	ID=GCA000144955_02562;Name=hypothetical protein;locus_tag=GCA000144955_02562;product=hypothetical protein;Parent=GCA000144955_02562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001177186.1,SO:0001217,UniParc:UPI00000D76CD,UniRef:UniRef100_Q2FV92,UniRef:UniRef50_Q2FV92,UniRef:UniRef90_Q2FV92
contig_1	Pyrodigal	gene	2616753	2617676	.	+	.	ID=GCA000144955_02563_gene;locus_tag=GCA000144955_02563;gene=rhaT
contig_1	Pyrodigal	CDS	2616753	2617676	.	+	0	ID=GCA000144955_02563;Name=EamA domain-containing protein;locus_tag=GCA000144955_02563;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000144955_02563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,SO:0001217,UniRef:UniRef50_Q2FV91,UniRef:UniRef90_Q2FV91
contig_1	Pyrodigal	gene	2617758	2618726	.	-	.	ID=GCA000144955_02564_gene;locus_tag=GCA000144955_02564;gene=aes
contig_1	Pyrodigal	CDS	2617758	2618726	.	-	0	ID=GCA000144955_02564;Name=Alpha/beta hydrolase;locus_tag=GCA000144955_02564;product=Alpha/beta hydrolase;gene=aes;Parent=GCA000144955_02564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001228172.1,SO:0001217,UniParc:UPI0001DD952C,UniRef:UniRef100_UPI0001DD952C,UniRef:UniRef50_A0A3A3AIJ1,UniRef:UniRef90_A0A3A3AIJ1
contig_1	Pyrodigal	gene	2618859	2619203	.	-	.	ID=GCA000144955_02565_gene;locus_tag=GCA000144955_02565
contig_1	Pyrodigal	CDS	2618859	2619203	.	-	0	ID=GCA000144955_02565;Name=Thioredoxin domain-containing protein;locus_tag=GCA000144955_02565;product=Thioredoxin domain-containing protein;Parent=GCA000144955_02565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000240660.1,SO:0001217,UniParc:UPI0001DD952D,UniRef:UniRef100_UPI0001DD952D,UniRef:UniRef50_Q2FV89,UniRef:UniRef90_Q2FV89
contig_1	Pyrodigal	gene	2619244	2619654	.	-	.	ID=GCA000144955_02566_gene;locus_tag=GCA000144955_02566;gene=fadM
contig_1	Pyrodigal	CDS	2619244	2619654	.	-	0	ID=GCA000144955_02566;Name=Acyl-CoA thioesterase;locus_tag=GCA000144955_02566;product=Acyl-CoA thioesterase;gene=fadM;Parent=GCA000144955_02566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000206037.1,SO:0001217,UniParc:UPI0001DD952E,UniRef:UniRef100_UPI0001DD952E,UniRef:UniRef50_Q2FV88,UniRef:UniRef90_Q2FV88
contig_1	Pyrodigal	gene	2620034	2622157	.	-	.	ID=GCA000144955_02567_gene;locus_tag=GCA000144955_02567;gene=glcB
contig_1	Pyrodigal	CDS	2620034	2622157	.	-	0	ID=GCA000144955_02567;Name=PTS system glucoside-specific EIICBA component;locus_tag=GCA000144955_02567;product=PTS system glucoside-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=glcB;Parent=GCA000144955_02567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,SO:0001217,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2FV87
contig_1	Pyrodigal	gene	2622397	2624136	.	-	.	ID=GCA000144955_02568_gene;locus_tag=GCA000144955_02568;gene=ilvB
contig_1	Pyrodigal	CDS	2622397	2624136	.	-	0	ID=GCA000144955_02568;Name=pyruvate oxidase;locus_tag=GCA000144955_02568;product=pyruvate oxidase;Dbxref=GO:0000287,GO:0030976;gene=ilvB;Parent=GCA000144955_02568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K00158,RefSeq:WP_001062656.1,SO:0001217,UniParc:UPI0001DD9530,UniRef:UniRef100_UPI0001DD9530,UniRef:UniRef50_A0A0D0QSZ0,UniRef:UniRef90_A0A142G9E0;ec_number=1.2.3.3
contig_1	Pyrodigal	gene	2624183	2624872	.	-	.	ID=GCA000144955_02569_gene;locus_tag=GCA000144955_02569;gene=cidB
contig_1	Pyrodigal	CDS	2624183	2624872	.	-	0	ID=GCA000144955_02569;Name=Holin-like protein CidB;locus_tag=GCA000144955_02569;product=Holin-like protein CidB;Dbxref=GO:0005886,GO:0031640;gene=cidB;Parent=GCA000144955_02569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_001001019.1,SO:0001217,UniParc:UPI00000548B3,UniRef:UniRef100_P60639,UniRef:UniRef50_P60639,UniRef:UniRef90_P60639
contig_1	Pyrodigal	gene	2624865	2625260	.	-	.	ID=GCA000144955_02570_gene;locus_tag=GCA000144955_02570;gene=cidA
contig_1	Pyrodigal	CDS	2624865	2625260	.	-	0	ID=GCA000144955_02570;Name=holin-like murein hydrolase modulator CidA;locus_tag=GCA000144955_02570;product=holin-like murein hydrolase modulator CidA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=cidA;Parent=GCA000144955_02570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000549734,COG:COG1380,COG:R,RefSeq:WP_000549734.1,SO:0001217,UniParc:UPI00000548B4,UniRef:UniRef100_P60647,UniRef:UniRef50_P60647,UniRef:UniRef90_P60647
contig_1	Pyrodigal	gene	2625475	2626338	.	-	.	ID=GCA000144955_02571_gene;locus_tag=GCA000144955_02571;gene=cidR
contig_1	Pyrodigal	CDS	2625475	2626338	.	-	0	ID=GCA000144955_02571;Name=cidABC operon transcriptional activator CidR;locus_tag=GCA000144955_02571;product=cidABC operon transcriptional activator CidR;gene=cidR;Parent=GCA000144955_02571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,SO:0001217,UniParc:UPI0001E0716E,UniRef:UniRef100_Q2FV83,UniRef:UniRef50_Q2FV83,UniRef:UniRef90_Q2FV83
contig_1	Pyrodigal	gene	2626520	2626738	.	+	.	ID=GCA000144955_02572_gene;locus_tag=GCA000144955_02572;gene=yozE
contig_1	Pyrodigal	CDS	2626520	2626738	.	+	0	ID=GCA000144955_02572;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000144955_02572;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000144955_02572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011686.1,SO:0001217,UniParc:UPI00021AD78B,UniRef:UniRef100_A0A380DZD6,UniRef:UniRef50_Q2FV82,UniRef:UniRef90_Q2FV82
contig_1	Infernal	gene	2626748	2626800	.	+	.	ID=GCA000144955_02573_gene;locus_tag=GCA000144955_02573;gene=sau-6072
contig_1	Infernal	ncRNA	2626748	2626800	1.4e-16	+	.	ID=GCA000144955_02573;Name=Staphylococcus sRNA sau-6072;locus_tag=GCA000144955_02573;product=Staphylococcus sRNA sau-6072;Dbxref=RFAM:RF02398;Parent=GCA000144955_02573_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02398
contig_1	Pyrodigal	gene	2627128	2627559	.	+	.	ID=GCA000144955_02574_gene;locus_tag=GCA000144955_02574;gene=lysM
contig_1	Pyrodigal	CDS	2627128	2627559	.	+	0	ID=GCA000144955_02574;Name=LysM domain protein;locus_tag=GCA000144955_02574;product=LysM domain protein;gene=lysM;Parent=GCA000144955_02574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000455861.1,SO:0001217,UniParc:UPI00000548B8,UniRef:UniRef100_Q2FV81,UniRef:UniRef50_Q2FV81,UniRef:UniRef90_Q2FV81
contig_1	Pyrodigal	gene	2627699	2628979	.	-	.	ID=GCA000144955_02575_gene;locus_tag=GCA000144955_02575;gene=hMG1
contig_1	Pyrodigal	CDS	2627699	2628979	.	-	0	ID=GCA000144955_02575;Name=hydroxymethylglutaryl-CoA reductase%2C degradative;locus_tag=GCA000144955_02575;product=hydroxymethylglutaryl-CoA reductase%2C degradative;Dbxref=GO:0004420,GO:0015936,GO:0016616;gene=hMG1;Parent=GCA000144955_02575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1257,COG:I,KEGG:K00054,RefSeq:WP_001180322.1,SO:0001217,UniParc:UPI0001DD9531,UniRef:UniRef100_UPI0001DD9531,UniRef:UniRef50_B9DLB2,UniRef:UniRef90_A0A641A7V3;ec_number=1.1.1.88
contig_1	Pyrodigal	gene	2629233	2630399	.	+	.	ID=GCA000144955_02576_gene;locus_tag=GCA000144955_02576;gene=pksG
contig_1	Pyrodigal	CDS	2629233	2630399	.	+	0	ID=GCA000144955_02576;Name=hydroxymethylglutaryl-CoA synthase;locus_tag=GCA000144955_02576;product=hydroxymethylglutaryl-CoA synthase;Dbxref=GO:0004421;gene=pksG;Parent=GCA000144955_02576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3425,COG:I,KEGG:K01641,RefSeq:WP_000151987.1,SO:0001217,UniParc:UPI0001DD9532,UniRef:UniRef100_UPI0001DD9532,UniRef:UniRef50_R3WMN8,UniRef:UniRef90_A0A2S6D8I9;ec_number=2.3.3.10
contig_1	Pyrodigal	gene	2630570	2631091	.	-	.	ID=GCA000144955_02577_gene;locus_tag=GCA000144955_02577;gene=adaB
contig_1	Pyrodigal	CDS	2630570	2631091	.	-	0	ID=GCA000144955_02577;Name=Methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA000144955_02577;product=Methylated-DNA--protein-cysteine methyltransferase;gene=adaB;Parent=GCA000144955_02577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0350,COG:L,RefSeq:WP_000262595.1,SO:0001217,UniParc:UPI0001DD9533,UniRef:UniRef100_UPI0001DD9533,UniRef:UniRef50_A0A3A5LJI7,UniRef:UniRef90_A0A3A5LJI7
contig_1	Pyrodigal	gene	2631454	2633562	.	+	.	ID=GCA000144955_02578_gene;locus_tag=GCA000144955_02578;gene=clpL
contig_1	Pyrodigal	CDS	2631454	2633562	.	+	0	ID=GCA000144955_02578;Name=ATP-dependent Clp protease ATP-binding subunit ClpL;locus_tag=GCA000144955_02578;product=ATP-dependent Clp protease ATP-binding subunit ClpL;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpL;Parent=GCA000144955_02578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058981,COG:COG0542,COG:O,KEGG:K04086,RefSeq:WP_001063335.1,SO:0001217,UniParc:UPI0001DD9534,UniRef:UniRef100_UPI0001DD9534,UniRef:UniRef50_Q2FV74,UniRef:UniRef90_Q2FV74
contig_1	Pyrodigal	gene	2633629	2633799	.	-	.	ID=GCA000144955_02579_gene;locus_tag=GCA000144955_02579
contig_1	Pyrodigal	CDS	2633629	2633799	.	-	0	ID=GCA000144955_02579;Name=FeoB-associated Cys-rich membrane protein;locus_tag=GCA000144955_02579;product=FeoB-associated Cys-rich membrane protein;Parent=GCA000144955_02579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000111367.1,SO:0001217,UniParc:UPI0001DD9535,UniRef:UniRef100_UPI0001DD9535,UniRef:UniRef50_Q2FV73,UniRef:UniRef90_A0A0U1MVH8
contig_1	Pyrodigal	gene	2633812	2635806	.	-	.	ID=GCA000144955_02580_gene;locus_tag=GCA000144955_02580;gene=feoB
contig_1	Pyrodigal	CDS	2633812	2635806	.	-	0	ID=GCA000144955_02580;Name=ferrous iron transport protein B;locus_tag=GCA000144955_02580;product=ferrous iron transport protein B;Dbxref=GO:0005525,GO:0005886,GO:0006826,GO:0015093,GO:0016020;gene=feoB;Parent=GCA000144955_02580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0370,COG:P,RefSeq:WP_000432890.1,SO:0001217,UniParc:UPI0001DD9536,UniRef:UniRef100_UPI0001DD9536,UniRef:UniRef50_Q99R86,UniRef:UniRef90_Q99R86
contig_1	Pyrodigal	gene	2635818	2636045	.	-	.	ID=GCA000144955_02581_gene;locus_tag=GCA000144955_02581;gene=feoA
contig_1	Pyrodigal	CDS	2635818	2636045	.	-	0	ID=GCA000144955_02581;Name=Ferrous iron transporter FeoA-like domain-containing protein;locus_tag=GCA000144955_02581;product=Ferrous iron transporter FeoA-like domain-containing protein;gene=feoA;Parent=GCA000144955_02581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1918,COG:P,RefSeq:WP_000932073.1,SO:0001217,UniParc:UPI00000548C1,UniRef:UniRef100_Q2FV71,UniRef:UniRef50_Q2FV71,UniRef:UniRef90_Q2FV71
contig_1	Pyrodigal	gene	2636261	2638750	.	-	.	ID=GCA000144955_02582_gene;locus_tag=GCA000144955_02582;gene=farE
contig_1	Pyrodigal	CDS	2636261	2638750	.	-	0	ID=GCA000144955_02582;Name=fatty acid efflux MMPL transporter FarE;locus_tag=GCA000144955_02582;product=fatty acid efflux MMPL transporter FarE;gene=farE;Parent=GCA000144955_02582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001051413,COG:COG2409,COG:R,RefSeq:WP_001051408.1,SO:0001217,UniParc:UPI0001DD9537,UniRef:UniRef100_UPI0001DD9537,UniRef:UniRef50_A0A2A4GX54,UniRef:UniRef90_A0A122EMC8
contig_1	Pyrodigal	gene	2638893	2639441	.	+	.	ID=GCA000144955_02583_gene;locus_tag=GCA000144955_02583;gene=farR
contig_1	Pyrodigal	CDS	2638893	2639441	.	+	0	ID=GCA000144955_02583;Name=fatty acid efflux pump transcriptional regulator FarR;locus_tag=GCA000144955_02583;product=fatty acid efflux pump transcriptional regulator FarR;gene=farR;Parent=GCA000144955_02583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000665241,COG:COG1309,COG:K,RefSeq:WP_000665235.1,SO:0001217,UniParc:UPI0001DD9538,UniRef:UniRef100_UPI00177E49BB,UniRef:UniRef50_Q2FV69,UniRef:UniRef90_Q2FV69
contig_1	Pyrodigal	gene	2639793	2641337	.	-	.	ID=GCA000144955_02584_gene;locus_tag=GCA000144955_02584;gene=pruA
contig_1	Pyrodigal	CDS	2639793	2641337	.	-	0	ID=GCA000144955_02584;Name=L-glutamate gamma-semialdehyde dehydrogenase;locus_tag=GCA000144955_02584;product=L-glutamate gamma-semialdehyde dehydrogenase;Dbxref=GO:0003842,GO:0006537,GO:0006562,GO:0009898,GO:0010133;gene=pruA;Parent=GCA000144955_02584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,KEGG:K00294,RefSeq:WP_000259683.1,SO:0001217,UniParc:UPI0001DD9539,UniRef:UniRef100_UPI0001DD9539,UniRef:UniRef50_P94391,UniRef:UniRef90_Q2FV67;ec_number=1.2.1.88
contig_1	Pyrodigal	gene	2641535	2642128	.	-	.	ID=GCA000144955_02585_gene;locus_tag=GCA000144955_02585
contig_1	Pyrodigal	CDS	2641535	2642128	.	-	0	ID=GCA000144955_02585;Name=Acetyltransferase;locus_tag=GCA000144955_02585;product=Acetyltransferase;Parent=GCA000144955_02585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00661,RefSeq:WP_000136490.1,SO:0001217,UniParc:UPI0001DD953A,UniRef:UniRef100_UPI0001DD953A,UniRef:UniRef50_Q4L967,UniRef:UniRef90_A0A2K4ALP0;ec_number=2.3.1.79
contig_1	Pyrodigal	gene	2642367	2642558	.	+	.	ID=GCA000144955_02586_gene;locus_tag=GCA000144955_02586;gene=cwrA
contig_1	Pyrodigal	CDS	2642367	2642558	.	+	0	ID=GCA000144955_02586;Name=cell wall inhibition responsive protein CwrA;locus_tag=GCA000144955_02586;product=cell wall inhibition responsive protein CwrA;gene=cwrA;Parent=GCA000144955_02586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221404,RefSeq:WP_001221404.1,SO:0001217,UniParc:UPI00000CAA05,UniRef:UniRef100_Q2FV65,UniRef:UniRef50_A0AAE3D5F7,UniRef:UniRef90_A0AAE3D5F7
contig_1	Pyrodigal	gene	2642798	2645206	.	+	.	ID=GCA000144955_02587_gene;locus_tag=GCA000144955_02587;gene=copZ
contig_1	Pyrodigal	CDS	2642798	2645206	.	+	0	ID=GCA000144955_02587;Name=copper chaperone CopZ;locus_tag=GCA000144955_02587;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0016887,GO:0043682,GO:0046872,GO:0055070,GO:0140581;gene=copZ;Parent=GCA000144955_02587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_000024135.1,SO:0001217,UniParc:UPI0001DD953B,UniRef:UniRef100_UPI0001DD953B,UniRef:UniRef50_Q2FV64,UniRef:UniRef90_Q2FV64;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	2645566	2645772	.	+	.	ID=GCA000144955_02588_gene;locus_tag=GCA000144955_02588;gene=copZ
contig_1	Pyrodigal	CDS	2645566	2645772	.	+	0	ID=GCA000144955_02588;Name=copper chaperone CopZ;locus_tag=GCA000144955_02588;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005737;gene=copZ;Parent=GCA000144955_02588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_000076662.1,SO:0001217,UniParc:UPI00003B1998,UniRef:UniRef100_Q6GDP0,UniRef:UniRef50_Q2FV63,UniRef:UniRef90_Q2FV63
contig_1	Pyrodigal	gene	2645862	2646860	.	-	.	ID=GCA000144955_02589_gene;locus_tag=GCA000144955_02589;gene=ldhA
contig_1	Pyrodigal	CDS	2645862	2646860	.	-	0	ID=GCA000144955_02589;Name=D-lactate dehydrogenase;locus_tag=GCA000144955_02589;product=D-lactate dehydrogenase;gene=ldhA;Parent=GCA000144955_02589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000161360.1,SO:0001217,UniParc:UPI0002DDE365,UniRef:UniRef100_UPI0002DDE365,UniRef:UniRef50_A0A658WNB1,UniRef:UniRef90_A0A658WNB1
contig_1	Pyrodigal	gene	2646883	2648037	.	-	.	ID=GCA000144955_02590_gene;locus_tag=GCA000144955_02590;gene=aspB
contig_1	Pyrodigal	CDS	2646883	2648037	.	-	0	ID=GCA000144955_02590;Name=Aminotransferase;locus_tag=GCA000144955_02590;product=Aminotransferase;gene=aspB;Parent=GCA000144955_02590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_000625076.1,SO:0001217,UniParc:UPI0001DD953D,UniRef:UniRef100_UPI0001DD953D,UniRef:UniRef50_A0A2I7YAX0,UniRef:UniRef90_A0A2I7YAX0
contig_1	Pyrodigal	gene	2648464	2649972	.	-	.	ID=GCA000144955_02591_gene;locus_tag=GCA000144955_02591;gene=crtN
contig_1	Pyrodigal	CDS	2648464	2649972	.	-	0	ID=GCA000144955_02591;Name=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);locus_tag=GCA000144955_02591;product=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);Dbxref=GO:0016117,GO:0102223;gene=crtN;Parent=GCA000144955_02591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,RefSeq:WP_000686182.1,SO:0001217,UniParc:UPI0001DD953E,UniRef:UniRef100_UPI0001DD953E,UniRef:UniRef50_Q2FV60,UniRef:UniRef90_Q2FV60;ec_number=1.3.8.-
contig_1	Pyrodigal	gene	2649984	2650847	.	-	.	ID=GCA000144955_02592_gene;locus_tag=GCA000144955_02592
contig_1	Pyrodigal	CDS	2649984	2650847	.	-	0	ID=GCA000144955_02592;Name=phytoene/squalene synthase family protein;locus_tag=GCA000144955_02592;product=phytoene/squalene synthase family protein;Parent=GCA000144955_02592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000178321.1,SO:0001217,UniParc:UPI0001DD96E8,UniRef:UniRef100_UPI0001DD96E8,UniRef:UniRef50_Q2FV59,UniRef:UniRef90_UPI0001DD96E8
contig_1	Pyrodigal	gene	2650884	2652011	.	-	.	ID=GCA000144955_02593_gene;locus_tag=GCA000144955_02593;gene=crtQ
contig_1	Pyrodigal	CDS	2650884	2652011	.	-	0	ID=GCA000144955_02593;Name=4%2C4'-diaponeurosporenoate glycosyltransferase;locus_tag=GCA000144955_02593;product=4%2C4'-diaponeurosporenoate glycosyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016757;gene=crtQ;Parent=GCA000144955_02593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000871731,COG:COG0463,COG:M,KEGG:K10211,RefSeq:WP_000871745.1,SO:0001217,UniParc:UPI0001DD96E9,UniRef:UniRef100_UPI0001DD96E9,UniRef:UniRef50_Q2FV58,UniRef:UniRef90_Q2FV58;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2652017	2653510	.	-	.	ID=GCA000144955_02594_gene;locus_tag=GCA000144955_02594;gene=crtP
contig_1	Pyrodigal	CDS	2652017	2653510	.	-	0	ID=GCA000144955_02594;Name=4%2C4'-diaponeurosporene oxygenase;locus_tag=GCA000144955_02594;product=4%2C4'-diaponeurosporene oxygenase;Dbxref=GO:0016117,GO:0016491;gene=crtP;Parent=GCA000144955_02594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,KEGG:K10210,RefSeq:WP_000160469.1,SO:0001217,UniParc:UPI0001DD96EA,UniRef:UniRef100_UPI0001DD96EA,UniRef:UniRef50_Q4VKU9,UniRef:UniRef90_Q2FV57;ec_number=1.14.99.-
contig_1	Pyrodigal	gene	2653503	2654000	.	-	.	ID=GCA000144955_02595_gene;locus_tag=GCA000144955_02595;gene=crtO
contig_1	Pyrodigal	CDS	2653503	2654000	.	-	0	ID=GCA000144955_02595;Name=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;locus_tag=GCA000144955_02595;product=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016746;gene=crtO;Parent=GCA000144955_02595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000855549,KEGG:K10212,SO:0001217,UniRef:UniRef50_Q53588,UniRef:UniRef90_Q53588;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2654166	2654945	.	-	.	ID=GCA000144955_02596_gene;locus_tag=GCA000144955_02596;gene=ssaA
contig_1	Pyrodigal	CDS	2654166	2654945	.	-	0	ID=GCA000144955_02596;Name=Staphylococcal secretory antigen SsaA;locus_tag=GCA000144955_02596;product=Staphylococcal secretory antigen SsaA;Dbxref=GO:0005576;gene=ssaA;Parent=GCA000144955_02596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000725215.1,SO:0001217,UniParc:UPI0001DD96EC,UniRef:UniRef100_UPI0001DD96EC,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2FV55
contig_1	Pyrodigal	gene	2655306	2657117	.	-	.	ID=GCA000144955_02597_gene;locus_tag=GCA000144955_02597;gene=oatA
contig_1	Pyrodigal	CDS	2655306	2657117	.	-	0	ID=GCA000144955_02597;Name=O-acetyltransferase OatA;locus_tag=GCA000144955_02597;product=O-acetyltransferase OatA;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oatA;Parent=GCA000144955_02597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_000379820.1,SO:0001217,UniParc:UPI0001DD96ED,UniRef:UniRef100_UPI0001DD96ED,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q2FV54;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2657792	2658493	.	-	.	ID=GCA000144955_02598_gene;locus_tag=GCA000144955_02598;gene=isaA
contig_1	Pyrodigal	CDS	2657792	2658493	.	-	0	ID=GCA000144955_02598;Name=lytic transglycosylase IsaA;locus_tag=GCA000144955_02598;product=lytic transglycosylase IsaA;Dbxref=GO:0005576,GO:0016798;gene=isaA;Parent=GCA000144955_02598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000751267,RefSeq:WP_000751275.1,SO:0001217,UniParc:UPI0001C0BD12,UniRef:UniRef100_A0A8G2MAE5,UniRef:UniRef50_Q2FV52,UniRef:UniRef90_Q2FV52;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2659101	2660156	.	-	.	ID=GCA000144955_02599_gene;locus_tag=GCA000144955_02599;gene=pfoR
contig_1	Pyrodigal	CDS	2659101	2660156	.	-	0	ID=GCA000144955_02599;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000144955_02599;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000144955_02599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000200684.1,SO:0001217,UniParc:UPI00000CAA88,UniRef:UniRef100_Q2FV51,UniRef:UniRef50_Q2FV51,UniRef:UniRef90_Q2FV51
contig_1	Pyrodigal	gene	2660566	2661135	.	+	.	ID=GCA000144955_02600_gene;locus_tag=GCA000144955_02600;gene=acrR
contig_1	Pyrodigal	CDS	2660566	2661135	.	+	0	ID=GCA000144955_02600;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000144955_02600;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000144955_02600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_001789900.1,SO:0001217,UniParc:UPI00000D777C,UniRef:UniRef100_A0A0H2WZJ2,UniRef:UniRef50_Q2FV48,UniRef:UniRef90_Q2FV48
contig_1	Pyrodigal	gene	2661326	2662519	.	-	.	ID=GCA000144955_02601_gene;locus_tag=GCA000144955_02601
contig_1	Pyrodigal	CDS	2661326	2662519	.	-	0	ID=GCA000144955_02601;Name=Transposase;locus_tag=GCA000144955_02601;product=Transposase;Parent=GCA000144955_02601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAP7YWJ8
contig_1	Pyrodigal	gene	2662616	2662972	.	-	.	ID=GCA000144955_02602_gene;locus_tag=GCA000144955_02602
contig_1	Pyrodigal	CDS	2662616	2662972	.	-	0	ID=GCA000144955_02602;Name=Transposase for IS1272;locus_tag=GCA000144955_02602;product=Transposase for IS1272;Parent=GCA000144955_02602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G1A0,UniRef:UniRef90_A0A380DP10
contig_1	Infernal	gene	2663009	2663246	.	+	.	ID=GCA000144955_02603_gene;locus_tag=GCA000144955_02603;gene=tsr24
contig_1	Infernal	ncRNA	2663009	2663246	4.7e-41	+	.	ID=GCA000144955_02603;Name=S. aureus tsr24 small RNA;locus_tag=GCA000144955_02603;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000144955_02603_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2663482	2663802	.	+	.	ID=GCA000144955_02604_gene;locus_tag=GCA000144955_02604
contig_1	Pyrodigal	CDS	2663482	2663802	.	+	0	ID=GCA000144955_02604;Name=hypothetical protein;locus_tag=GCA000144955_02604;product=hypothetical protein;Parent=GCA000144955_02604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3K4R4,UniRef:UniRef90_A0A0U1MU54
contig_1	Pyrodigal	gene	2664022	2664252	.	+	.	ID=GCA000144955_02605_gene;locus_tag=GCA000144955_02605;gene=ynzC
contig_1	Pyrodigal	CDS	2664022	2664252	.	+	0	ID=GCA000144955_02605;Name=UPF0291 protein SAR2654;locus_tag=GCA000144955_02605;product=UPF0291 protein SAR2654;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000144955_02605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000697134.1,SO:0001217,UniParc:UPI00000548DD,UniRef:UniRef100_P60077,UniRef:UniRef50_P60077,UniRef:UniRef90_P60077
contig_1	Pyrodigal	gene	2664383	2664760	.	-	.	ID=GCA000144955_02606_gene;locus_tag=GCA000144955_02606
contig_1	Pyrodigal	CDS	2664383	2664760	.	-	0	ID=GCA000144955_02606;Name=Glyoxalase;locus_tag=GCA000144955_02606;product=Glyoxalase;Parent=GCA000144955_02606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3607,COG:R,RefSeq:WP_000616231.1,SO:0001217,UniParc:UPI0001DD96F0,UniRef:UniRef100_UPI0001DD96F0,UniRef:UniRef50_A0A654C7N0,UniRef:UniRef90_A0A389VAD6
contig_1	Pyrodigal	gene	2664777	2665598	.	-	.	ID=GCA000144955_02607_gene;locus_tag=GCA000144955_02607;gene=ybjT
contig_1	Pyrodigal	CDS	2664777	2665598	.	-	0	ID=GCA000144955_02607;Name=NAD dependent epimerase/dehydratase family protein;locus_tag=GCA000144955_02607;product=NAD dependent epimerase/dehydratase family protein;gene=ybjT;Parent=GCA000144955_02607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_000651841.1,SO:0001217,UniParc:UPI0001DD96F1,UniRef:UniRef100_UPI0001DD96F1,UniRef:UniRef50_A0A380FXE5,UniRef:UniRef90_A0A2S6D292
contig_1	Pyrodigal	gene	2665617	2665916	.	-	.	ID=GCA000144955_02608_gene;locus_tag=GCA000144955_02608
contig_1	Pyrodigal	CDS	2665617	2665916	.	-	0	ID=GCA000144955_02608;Name=DUF2316 domain-containing protein;locus_tag=GCA000144955_02608;product=DUF2316 domain-containing protein;Parent=GCA000144955_02608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4367,COG:S,RefSeq:WP_000055852.1,SO:0001217,UniParc:UPI0001DD96F2,UniRef:UniRef100_UPI0001DD96F2,UniRef:UniRef50_Q2FV43,UniRef:UniRef90_Q2FV43
contig_1	Pyrodigal	gene	2666047	2666604	.	+	.	ID=GCA000144955_02609_gene;locus_tag=GCA000144955_02609;gene=acrR
contig_1	Pyrodigal	CDS	2666047	2666604	.	+	0	ID=GCA000144955_02609;Name=HTH-type transcriptional regulator SACOL2593;locus_tag=GCA000144955_02609;product=HTH-type transcriptional regulator SACOL2593;Dbxref=GO:0003677;gene=acrR;Parent=GCA000144955_02609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_001224180.1,SO:0001217,UniParc:UPI0001DD96F3,UniRef:UniRef100_UPI0001DD96F3,UniRef:UniRef50_Q2FV42,UniRef:UniRef90_Q2FV42
contig_1	Pyrodigal	gene	2666597	2667301	.	+	.	ID=GCA000144955_02610_gene;locus_tag=GCA000144955_02610;gene=fabG
contig_1	Pyrodigal	CDS	2666597	2667301	.	+	0	ID=GCA000144955_02610;Name=KR domain-containing protein;locus_tag=GCA000144955_02610;product=KR domain-containing protein;gene=fabG;Parent=GCA000144955_02610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000161833.1,SO:0001217,UniParc:UPI0001DD96F4,UniRef:UniRef100_UPI0001DD96F4,UniRef:UniRef50_A0A2K4AHE4,UniRef:UniRef90_A0A2K4AHE4
contig_1	Pyrodigal	gene	2667399	2668409	.	+	.	ID=GCA000144955_02611_gene;locus_tag=GCA000144955_02611;gene=ligW
contig_1	Pyrodigal	CDS	2667399	2668409	.	+	0	ID=GCA000144955_02611;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000144955_02611;product=Amidohydrolase-related domain-containing protein;gene=ligW;Parent=GCA000144955_02611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2159,COG:G,RefSeq:WP_000836409.1,SO:0001217,UniParc:UPI0001DD96F5,UniRef:UniRef100_UPI0001DD96F5,UniRef:UniRef50_Q2FV40,UniRef:UniRef90_Q2FV40
contig_1	Pyrodigal	gene	2668550	2669257	.	+	.	ID=GCA000144955_02612_gene;locus_tag=GCA000144955_02612;gene=menH
contig_1	Pyrodigal	CDS	2668550	2669257	.	+	0	ID=GCA000144955_02612;Name=putative hydrolase SA2367;locus_tag=GCA000144955_02612;product=putative hydrolase SA2367;Dbxref=GO:0016020,GO:0016787;gene=menH;Parent=GCA000144955_02612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,SO:0001217,UniRef:UniRef50_Q2FDS6,UniRef:UniRef90_Q2FDS6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2669405	2670295	.	-	.	ID=GCA000144955_02613_gene;locus_tag=GCA000144955_02613;gene=yejR
contig_1	Pyrodigal	CDS	2669405	2670295	.	-	0	ID=GCA000144955_02613;Name=GTP-binding protein;locus_tag=GCA000144955_02613;product=GTP-binding protein;gene=yejR;Parent=GCA000144955_02613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000706525.1,SO:0001217,UniParc:UPI0001DD96F6,UniRef:UniRef100_UPI0001DD96F6,UniRef:UniRef50_L7STG1,UniRef:UniRef90_Q2FV38
contig_1	Pyrodigal	gene	2670396	2671742	.	-	.	ID=GCA000144955_02614_gene;locus_tag=GCA000144955_02614;gene=feoB
contig_1	Pyrodigal	CDS	2670396	2671742	.	-	0	ID=GCA000144955_02614;Name=Ferrous iron transport protein B;locus_tag=GCA000144955_02614;product=Ferrous iron transport protein B;gene=feoB;Parent=GCA000144955_02614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0370,COG:P,SO:0001217,UniRef:UniRef50_B9DL78,UniRef:UniRef90_A0A077UMB4
contig_1	Pyrodigal	gene	2671730	2672836	.	-	.	ID=GCA000144955_02615_gene;locus_tag=GCA000144955_02615;gene=trxB
contig_1	Pyrodigal	CDS	2671730	2672836	.	-	0	ID=GCA000144955_02615;Name=Putative flavoprotein monooxygenase;locus_tag=GCA000144955_02615;product=Putative flavoprotein monooxygenase;Dbxref=GO:0004497,GO:0050660;gene=trxB;Parent=GCA000144955_02615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,RefSeq:WP_001163732.1,SO:0001217,UniParc:UPI0001DD96F8,UniRef:UniRef100_UPI0001DD96F8,UniRef:UniRef50_Q99R54,UniRef:UniRef90_Q99R54;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2673172	2673468	.	-	.	ID=GCA000144955_02616_gene;locus_tag=GCA000144955_02616
contig_1	Pyrodigal	CDS	2673172	2673468	.	-	0	ID=GCA000144955_02616;Name=DUF4176 domain-containing protein;locus_tag=GCA000144955_02616;product=DUF4176 domain-containing protein;Parent=GCA000144955_02616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4495,COG:S,RefSeq:WP_000447707.1,SO:0001217,UniParc:UPI0001C11F03,UniRef:UniRef100_A0A2S6DFQ4,UniRef:UniRef50_Q2FV34,UniRef:UniRef90_Q2FV34
contig_1	Pyrodigal	gene	2673456	2673794	.	-	.	ID=GCA000144955_02617_gene;locus_tag=GCA000144955_02617
contig_1	Pyrodigal	CDS	2673456	2673794	.	-	0	ID=GCA000144955_02617;Name=hypothetical protein;locus_tag=GCA000144955_02617;product=hypothetical protein;Parent=GCA000144955_02617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A6A9GUL6,UniRef:UniRef90_A0A6A9GUL6
contig_1	Pyrodigal	gene	2673839	2674117	.	-	.	ID=GCA000144955_02618_gene;locus_tag=GCA000144955_02618
contig_1	Pyrodigal	CDS	2673839	2674117	.	-	0	ID=GCA000144955_02618;Name=TIGR04197 family type VII secretion effector;locus_tag=GCA000144955_02618;product=TIGR04197 family type VII secretion effector;Parent=GCA000144955_02618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000987947.1,SO:0001217,UniParc:UPI00003B19AF,UniRef:UniRef100_A0A7Z7W2Q5,UniRef:UniRef50_Q2FV32,UniRef:UniRef90_Q2FV32
contig_1	Pyrodigal	gene	2674454	2675320	.	-	.	ID=GCA000144955_02619_gene;locus_tag=GCA000144955_02619;gene=fN3K
contig_1	Pyrodigal	CDS	2674454	2675320	.	-	0	ID=GCA000144955_02619;Name=putative ketoamine kinase SAOUHSC_02908;locus_tag=GCA000144955_02619;product=putative ketoamine kinase SAOUHSC_02908;Dbxref=GO:0005524,GO:0016301,GO:0016773,GO:0102193;gene=fN3K;Parent=GCA000144955_02619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3001,COG:G,RefSeq:WP_001005528.1,SO:0001217,UniParc:UPI0001DD96FA,UniRef:UniRef100_UPI0001DD96FA,UniRef:UniRef50_Q2FV31,UniRef:UniRef90_Q2FV31;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2675538	2676602	.	+	.	ID=GCA000144955_02620_gene;locus_tag=GCA000144955_02620;gene=pyrD
contig_1	Pyrodigal	CDS	2675538	2676602	.	+	0	ID=GCA000144955_02620;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000144955_02620;product=quinone-dependent dihydroorotate dehydrogenase;gene=pyrD;Parent=GCA000144955_02620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_000277418.1,SO:0001217,UniParc:UPI0001DD96FB,UniRef:UniRef100_UPI0001DD96FB,UniRef:UniRef50_Q2FV30,UniRef:UniRef90_Q2FV30;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	2676757	2677032	.	+	.	ID=GCA000144955_02621_gene;locus_tag=GCA000144955_02621
contig_1	Pyrodigal	CDS	2676757	2677032	.	+	0	ID=GCA000144955_02621;Name=Transmembrane protein;locus_tag=GCA000144955_02621;product=Transmembrane protein;Parent=GCA000144955_02621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159833.1,SO:0001217,UniParc:UPI0001DD96FC,UniRef:UniRef100_UPI0001DD96FC,UniRef:UniRef50_A0A654C2I8,UniRef:UniRef90_Q2FV29
contig_1	Pyrodigal	gene	2677218	2677940	.	-	.	ID=GCA000144955_02622_gene;locus_tag=GCA000144955_02622;gene=queH
contig_1	Pyrodigal	CDS	2677218	2677940	.	-	0	ID=GCA000144955_02622;Name=Epoxyqueuosine reductase QueH;locus_tag=GCA000144955_02622;product=Epoxyqueuosine reductase QueH;Dbxref=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queH;Parent=GCA000144955_02622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1636,COG:J,KEGG:K09765,RefSeq:WP_000606205.1,SO:0001217,UniParc:UPI00005FE832,UniRef:UniRef100_UPI00005FE832,UniRef:UniRef50_Q9A1K3,UniRef:UniRef90_A0A0H3JUG6;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	2678291	2678740	.	+	.	ID=GCA000144955_02623_gene;locus_tag=GCA000144955_02623;gene=phnB
contig_1	Pyrodigal	CDS	2678291	2678740	.	+	0	ID=GCA000144955_02623;Name=PhnB-like domain-containing protein;locus_tag=GCA000144955_02623;product=PhnB-like domain-containing protein;gene=phnB;Parent=GCA000144955_02623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2764,RefSeq:WP_000125707.1,SO:0001217,UniParc:UPI0001B3B1B2,UniRef:UniRef100_A0A0S2J9G7,UniRef:UniRef50_Q2FV27,UniRef:UniRef90_Q2FV27
contig_1	Pyrodigal	gene	2678827	2679414	.	-	.	ID=GCA000144955_02624_gene;locus_tag=GCA000144955_02624;gene=acrR
contig_1	Pyrodigal	CDS	2678827	2679414	.	-	0	ID=GCA000144955_02624;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000144955_02624;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000144955_02624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000151123.1,SO:0001217,UniParc:UPI0001DD96FD,UniRef:UniRef100_UPI0001DD96FD,UniRef:UniRef50_Q2FV26,UniRef:UniRef90_Q2FV26
contig_1	Pyrodigal	gene	2679557	2681239	.	+	.	ID=GCA000144955_02625_gene;locus_tag=GCA000144955_02625
contig_1	Pyrodigal	CDS	2679557	2681239	.	+	0	ID=GCA000144955_02625;Name=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;locus_tag=GCA000144955_02625;product=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;Parent=GCA000144955_02625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2936,COG:R,KEGG:K06978,RefSeq:WP_001071593.1,SO:0001217,UniParc:UPI0001DD96FE,UniRef:UniRef100_UPI0001DD96FE,UniRef:UniRef50_A0A380G5J2,UniRef:UniRef90_Q2FV24
contig_1	Pyrodigal	gene	2681349	2681987	.	-	.	ID=GCA000144955_02626_gene;locus_tag=GCA000144955_02626
contig_1	Pyrodigal	CDS	2681349	2681987	.	-	0	ID=GCA000144955_02626;Name=Gram-positive cocci surface proteins LPxTG domain-containing protein;locus_tag=GCA000144955_02626;product=Gram-positive cocci surface proteins LPxTG domain-containing protein;Parent=GCA000144955_02626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3JS08
contig_1	Pyrodigal	gene	2682311	2682694	.	-	.	ID=GCA000144955_02627_gene;locus_tag=GCA000144955_02627;gene=panD
contig_1	Pyrodigal	CDS	2682311	2682694	.	-	0	ID=GCA000144955_02627;Name=aspartate 1-decarboxylase;locus_tag=GCA000144955_02627;product=aspartate 1-decarboxylase;Dbxref=GO:0004068,GO:0005829,GO:0006523,GO:0015940;gene=panD;Parent=GCA000144955_02627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0853,COG:H,KEGG:K01579,RefSeq:WP_000621535.1,SO:0001217,UniParc:UPI0001DD9700,UniRef:UniRef100_UPI0001DD9700,UniRef:UniRef50_Q2FV23,UniRef:UniRef90_Q2FV23;ec_number=4.1.1.11
contig_1	Pyrodigal	gene	2682696	2683547	.	-	.	ID=GCA000144955_02628_gene;locus_tag=GCA000144955_02628;gene=panC
contig_1	Pyrodigal	CDS	2682696	2683547	.	-	0	ID=GCA000144955_02628;Name=pantoate--beta-alanine ligase;locus_tag=GCA000144955_02628;product=pantoate--beta-alanine ligase;Dbxref=GO:0004592,GO:0005524,GO:0005829,GO:0015940;gene=panC;Parent=GCA000144955_02628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0414,COG:H,KEGG:K01918,RefSeq:WP_000163740.1,SO:0001217,UniParc:UPI0001DD9701,UniRef:UniRef100_UPI0001DD9701,UniRef:UniRef50_Q2FV22,UniRef:UniRef90_Q2FV22;ec_number=6.3.2.1
contig_1	Pyrodigal	gene	2683540	2684358	.	-	.	ID=GCA000144955_02629_gene;locus_tag=GCA000144955_02629;gene=panB
contig_1	Pyrodigal	CDS	2683540	2684358	.	-	0	ID=GCA000144955_02629;Name=3-methyl-2-oxobutanoate hydroxymethyltransferase;locus_tag=GCA000144955_02629;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;Dbxref=GO:0000287,GO:0003864,GO:0005737,GO:0015940;gene=panB;Parent=GCA000144955_02629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0413,COG:H,KEGG:K00606,RefSeq:WP_000860047.1,SO:0001217,UniParc:UPI0000131282,UniRef:UniRef100_Q2FV21,UniRef:UniRef50_Q2FV21,UniRef:UniRef90_Q2FV21;ec_number=2.1.2.11
contig_1	Pyrodigal	gene	2684431	2685291	.	+	.	ID=GCA000144955_02630_gene;locus_tag=GCA000144955_02630;gene=panE
contig_1	Pyrodigal	CDS	2684431	2685291	.	+	0	ID=GCA000144955_02630;Name=oxidoreductase;locus_tag=GCA000144955_02630;product=oxidoreductase;gene=panE;Parent=GCA000144955_02630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000953559.1,SO:0001217,UniParc:UPI0001DD9702,UniRef:UniRef100_UPI0001DD9702,UniRef:UniRef50_A0A0J9X283,UniRef:UniRef90_A0A0J9X283
contig_1	Pyrodigal	gene	2685377	2686081	.	-	.	ID=GCA000144955_02631_gene;locus_tag=GCA000144955_02631;gene=budA
contig_1	Pyrodigal	CDS	2685377	2686081	.	-	0	ID=GCA000144955_02631;Name=acetolactate decarboxylase;locus_tag=GCA000144955_02631;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000144955_02631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,KEGG:K01575,RefSeq:WP_000186117.1,SO:0001217,UniParc:UPI00000548FA,UniRef:UniRef100_Q2FV19,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MVR1;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2686359	2687318	.	-	.	ID=GCA000144955_02632_gene;locus_tag=GCA000144955_02632;gene=ldh2
contig_1	Pyrodigal	CDS	2686359	2687318	.	-	0	ID=GCA000144955_02632;Name=L-lactate dehydrogenase;locus_tag=GCA000144955_02632;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh2;Parent=GCA000144955_02632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,KEGG:K00016,RefSeq:WP_000846637.1,SO:0001217,UniParc:UPI00000548FB,UniRef:UniRef100_Q2G1Y5,UniRef:UniRef50_P00344,UniRef:UniRef90_Q2G1Y5;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	2688004	2689452	.	+	.	ID=GCA000144955_02633_gene;locus_tag=GCA000144955_02633;gene=potE
contig_1	Pyrodigal	CDS	2688004	2689452	.	+	0	ID=GCA000144955_02633;Name=Amino acid permease;locus_tag=GCA000144955_02633;product=Amino acid permease;gene=potE;Parent=GCA000144955_02633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000534419.1,SO:0001217,UniParc:UPI00003B19B9,UniRef:UniRef100_A0A7Z7R1R1,UniRef:UniRef50_A2RHI9,UniRef:UniRef90_Q2G1Y2
contig_1	Pyrodigal	gene	2689532	2690869	.	-	.	ID=GCA000144955_02634_gene;locus_tag=GCA000144955_02634;gene=argD
contig_1	Pyrodigal	CDS	2689532	2690869	.	-	0	ID=GCA000144955_02634;Name=aspartate aminotransferase family protein;locus_tag=GCA000144955_02634;product=aspartate aminotransferase family protein;Dbxref=GO:0008483;gene=argD;Parent=GCA000144955_02634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0160,COG:E,RefSeq:WP_000030058.1,SO:0001217,UniParc:UPI0001DD9703,UniRef:UniRef100_UPI0001DD9703,UniRef:UniRef50_Q2G1Y4,UniRef:UniRef90_Q2G1Y4
contig_1	Pyrodigal	gene	2691123	2691539	.	+	.	ID=GCA000144955_02635_gene;locus_tag=GCA000144955_02635
contig_1	Pyrodigal	CDS	2691123	2691539	.	+	0	ID=GCA000144955_02635;Name=hypothetical protein;locus_tag=GCA000144955_02635;product=hypothetical protein;Parent=GCA000144955_02635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001237625.1,SO:0001217,UniParc:UPI00003B19BB,UniRef:UniRef100_A0A7Z7W2V1,UniRef:UniRef50_Q2FV18,UniRef:UniRef90_Q2FV18
contig_1	Pyrodigal	gene	2691662	2692552	.	+	.	ID=GCA000144955_02636_gene;locus_tag=GCA000144955_02636;gene=fda
contig_1	Pyrodigal	CDS	2691662	2692552	.	+	0	ID=GCA000144955_02636;Name=fructose bisphosphate aldolase;locus_tag=GCA000144955_02636;product=fructose bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096;gene=fda;Parent=GCA000144955_02636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01623,RefSeq:WP_001031403.1,SO:0001217,UniParc:UPI0001DD9704,UniRef:UniRef100_UPI0001DD9704,UniRef:UniRef50_Q8CMY5,UniRef:UniRef90_Q6GDJ7;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2692745	2694241	.	-	.	ID=GCA000144955_02637_gene;locus_tag=GCA000144955_02637;gene=lqo
contig_1	Pyrodigal	CDS	2692745	2694241	.	-	0	ID=GCA000144955_02637;Name=L-lactate dehydrogenase (quinone);locus_tag=GCA000144955_02637;product=L-lactate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=lqo;Parent=GCA000144955_02637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,KEGG:K00116,RefSeq:WP_001130051.1,SO:0001217,UniParc:UPI000012F4C1,UniRef:UniRef100_Q5HCU5,UniRef:UniRef50_O69282,UniRef:UniRef90_Q5HCU5;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2694618	2694866	.	+	.	ID=GCA000144955_02638_gene;locus_tag=GCA000144955_02638
contig_1	Pyrodigal	CDS	2694618	2694866	.	+	0	ID=GCA000144955_02638;Name=Membrane protein;locus_tag=GCA000144955_02638;product=Membrane protein;Parent=GCA000144955_02638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7U7JRK4,UniRef:UniRef90_A0A269LGV0
contig_1	Pyrodigal	gene	2694926	2696545	.	-	.	ID=GCA000144955_02639_gene;locus_tag=GCA000144955_02639;gene=mbcS
contig_1	Pyrodigal	CDS	2694926	2696545	.	-	0	ID=GCA000144955_02639;Name=acyl-CoA synthetase MbcS;locus_tag=GCA000144955_02639;product=acyl-CoA synthetase MbcS;gene=mbcS;Parent=GCA000144955_02639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0365,COG:I,SO:0001217,UniParc:UPI0000054904,UniRef:UniRef100_A0A380EMG2,UniRef:UniRef50_C0SPB0,UniRef:UniRef90_A0A2K4AH92
contig_1	Pyrodigal	gene	2696718	2697161	.	-	.	ID=GCA000144955_02640_gene;locus_tag=GCA000144955_02640
contig_1	Pyrodigal	CDS	2696718	2697161	.	-	0	ID=GCA000144955_02640;Name=Signal transduction protein TRAP;locus_tag=GCA000144955_02640;product=Signal transduction protein TRAP;Parent=GCA000144955_02640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001028778.1,SO:0001217,UniParc:UPI0001DD987C,UniRef:UniRef100_UPI0001DD987C,UniRef:UniRef50_A0A2T4SS92,UniRef:UniRef90_A0A0U1MTU5
contig_1	Pyrodigal	gene	2697441	2697653	.	-	.	ID=GCA000144955_02641_gene;locus_tag=GCA000144955_02641;gene=yozE
contig_1	Pyrodigal	CDS	2697441	2697653	.	-	0	ID=GCA000144955_02641;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000144955_02641;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000144955_02641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011688.1,SO:0001217,UniParc:UPI0000054906,UniRef:UniRef100_Q2FV12,UniRef:UniRef50_Q2FV12,UniRef:UniRef90_Q2FV12
contig_1	Pyrodigal	gene	2697931	2699640	.	-	.	ID=GCA000144955_02642_gene;locus_tag=GCA000144955_02642;gene=betA
contig_1	Pyrodigal	CDS	2697931	2699640	.	-	0	ID=GCA000144955_02642;Name=choline dehydrogenase;locus_tag=GCA000144955_02642;product=choline dehydrogenase;Dbxref=GO:0008802,GO:0008812,GO:0016020,GO:0019285,GO:0050660;gene=betA;Parent=GCA000144955_02642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2303,COG:IR,KEGG:K00108,RefSeq:WP_000066528.1,SO:0001217,UniParc:UPI0001DD987D,UniRef:UniRef100_UPI0001DD987D,UniRef:UniRef50_Q9X2M2,UniRef:UniRef90_Q8NUM0;ec_number=1.1.99.1
contig_1	Pyrodigal	gene	2699901	2701391	.	-	.	ID=GCA000144955_02643_gene;locus_tag=GCA000144955_02643;gene=betB
contig_1	Pyrodigal	CDS	2699901	2701391	.	-	0	ID=GCA000144955_02643;Name=betaine-aldehyde dehydrogenase;locus_tag=GCA000144955_02643;product=betaine-aldehyde dehydrogenase;Dbxref=GO:0008802,GO:0019285,GO:0046872;gene=betB;Parent=GCA000144955_02643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000421711.1,SO:0001217,UniParc:UPI0001DD987E,UniRef:UniRef100_UPI0001DD987E,UniRef:UniRef50_P71016,UniRef:UniRef90_A0A114JEL6;ec_number=1.2.1.8
contig_1	Pyrodigal	gene	2701644	2702207	.	+	.	ID=GCA000144955_02644_gene;locus_tag=GCA000144955_02644;gene=cudC
contig_1	Pyrodigal	CDS	2701644	2702207	.	+	0	ID=GCA000144955_02644;Name=choline uptake/conversion transcriptional regulator CudC;locus_tag=GCA000144955_02644;product=choline uptake/conversion transcriptional regulator CudC;gene=cudC;Parent=GCA000144955_02644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1510,COG:K,RefSeq:WP_000198603.1,SO:0001217,UniParc:UPI0001DD987F,UniRef:UniRef100_UPI0001DD987F,UniRef:UniRef50_A0A653VN80,UniRef:UniRef90_A0A7U7PWT0
contig_1	Pyrodigal	gene	2702377	2703999	.	-	.	ID=GCA000144955_02645_gene;locus_tag=GCA000144955_02645;gene=betT
contig_1	Pyrodigal	CDS	2702377	2703999	.	-	0	ID=GCA000144955_02645;Name=BCCT family transporter;locus_tag=GCA000144955_02645;product=BCCT family transporter;gene=betT;Parent=GCA000144955_02645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000711870.1,SO:0001217,UniParc:UPI00000D7878,UniRef:UniRef100_Q2FV06,UniRef:UniRef50_B9DJU7,UniRef:UniRef90_A0A2K4AH89
contig_1	Pyrodigal	gene	2704516	2705052	.	-	.	ID=GCA000144955_02646_gene;locus_tag=GCA000144955_02646;gene=nrdG
contig_1	Pyrodigal	CDS	2704516	2705052	.	-	0	ID=GCA000144955_02646;Name=anaerobic ribonucleoside-triphosphate reductase activating protein;locus_tag=GCA000144955_02646;product=anaerobic ribonucleoside-triphosphate reductase activating protein;Dbxref=GO:0043365,GO:0051539;gene=nrdG;Parent=GCA000144955_02646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,RefSeq:WP_000173331.1,SO:0001217,UniParc:UPI00000CA9ED,UniRef:UniRef100_W8TQE8,UniRef:UniRef50_Q5HL05,UniRef:UniRef90_W8TQE8
contig_1	Pyrodigal	gene	2705049	2706899	.	-	.	ID=GCA000144955_02647_gene;locus_tag=GCA000144955_02647;gene=nrdD
contig_1	Pyrodigal	CDS	2705049	2706899	.	-	0	ID=GCA000144955_02647;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA000144955_02647;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0006260,GO:0008998;gene=nrdD;Parent=GCA000144955_02647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,KEGG:K21636,RefSeq:WP_001071717.1,SO:0001217,UniParc:UPI0000054912,UniRef:UniRef100_Q2FV02,UniRef:UniRef50_A0A3M8TCM7,UniRef:UniRef90_A0A6B1RSJ5;ec_number=1.17.4.2
contig_1	Pyrodigal	gene	2707146	2708516	.	-	.	ID=GCA000144955_02648_gene;locus_tag=GCA000144955_02648;gene=citM
contig_1	Pyrodigal	CDS	2707146	2708516	.	-	0	ID=GCA000144955_02648;Name=Citrate transporter;locus_tag=GCA000144955_02648;product=Citrate transporter;gene=citM;Parent=GCA000144955_02648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2851,RefSeq:WP_001083498.1,SO:0001217,UniParc:UPI0001DD9880,UniRef:UniRef100_UPI0001DD9880,UniRef:UniRef50_U7MQB7,UniRef:UniRef90_A0A2K4AHA3
contig_1	Pyrodigal	gene	2709009	2709614	.	-	.	ID=GCA000144955_02649_gene;locus_tag=GCA000144955_02649;gene=cysG2
contig_1	Pyrodigal	CDS	2709009	2709614	.	-	0	ID=GCA000144955_02649;Name=NAD(P)-binding protein;locus_tag=GCA000144955_02649;product=NAD(P)-binding protein;gene=cysG2;Parent=GCA000144955_02649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1648,COG:H,RefSeq:WP_001057057.1,SO:0001217,UniParc:UPI0001DD9881,UniRef:UniRef100_UPI0001DD9881,UniRef:UniRef50_A0A380FX36,UniRef:UniRef90_A0A2S6D249
contig_1	Pyrodigal	gene	2709677	2711557	.	-	.	ID=GCA000144955_02650_gene;locus_tag=GCA000144955_02650;gene=cysJ
contig_1	Pyrodigal	CDS	2709677	2711557	.	-	0	ID=GCA000144955_02650;Name=assimilatory sulfite reductase (NADPH) flavoprotein subunit;locus_tag=GCA000144955_02650;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;Dbxref=GO:0004783,GO:0006790,GO:0009337,GO:0010181,GO:0019344,GO:0050660;gene=cysJ;Parent=GCA000144955_02650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0369,COG:FP,RefSeq:WP_000775167.1,SO:0001217,UniParc:UPI0001DD9882,UniRef:UniRef100_UPI0001DD9882,UniRef:UniRef50_A0A380BWQ0,UniRef:UniRef90_Q2FUZ8;ec_number=1.8.1.2
contig_1	Pyrodigal	gene	2711952	2712449	.	-	.	ID=GCA000144955_02651_gene;locus_tag=GCA000144955_02651;gene=btuE
contig_1	Pyrodigal	CDS	2711952	2712449	.	-	0	ID=GCA000144955_02651;Name=Glutathione peroxidase;locus_tag=GCA000144955_02651;product=Glutathione peroxidase;gene=btuE;Parent=GCA000144955_02651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_001065272.1,SO:0001217,UniParc:UPI0001DD9883,UniRef:UniRef100_UPI0001DD9883,UniRef:UniRef50_Q5HKZ3,UniRef:UniRef90_A0A7U7JRL2;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	2712459	2712710	.	-	.	ID=GCA000144955_02652_gene;locus_tag=GCA000144955_02652
contig_1	Pyrodigal	CDS	2712459	2712710	.	-	0	ID=GCA000144955_02652;Name=Transposase;locus_tag=GCA000144955_02652;product=Transposase;Parent=GCA000144955_02652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1XD68,UniRef:UniRef90_A0A6G4IRM3
contig_1	Pyrodigal	gene	2713873	2715873	.	-	.	ID=GCA000144955_02653_gene;locus_tag=GCA000144955_02653
contig_1	Pyrodigal	CDS	2713873	2715873	.	-	0	ID=GCA000144955_02653;Name=Similar to ABC transporter (ATP-binding protein);locus_tag=GCA000144955_02653;product=Similar to ABC transporter (ATP-binding protein);Parent=GCA000144955_02653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19084,RefSeq:WP_000776731.1,SO:0001217,UniParc:UPI0001DD9884,UniRef:UniRef100_UPI0001DD9884,UniRef:UniRef50_A0A7U7F0H2,UniRef:UniRef90_A0A7U7F0H2
contig_1	Pyrodigal	gene	2715870	2716625	.	-	.	ID=GCA000144955_02654_gene;locus_tag=GCA000144955_02654;gene=lolD
contig_1	Pyrodigal	CDS	2715870	2716625	.	-	0	ID=GCA000144955_02654;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_02654;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000144955_02654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000923768.1,SO:0001217,UniParc:UPI0001C11FDF,UniRef:UniRef100_A0A2S6D259,UniRef:UniRef50_A0A2S6D259,UniRef:UniRef90_A0A2S6D259
contig_1	Pyrodigal	gene	2716733	2717620	.	-	.	ID=GCA000144955_02655_gene;locus_tag=GCA000144955_02655;gene=nsaS
contig_1	Pyrodigal	CDS	2716733	2717620	.	-	0	ID=GCA000144955_02655;Name=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;locus_tag=GCA000144955_02655;product=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;gene=nsaS;Parent=GCA000144955_02655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143419,COG:COG0642,COG:T,KEGG:K19081,RefSeq:WP_000143420.1,SO:0001217,UniParc:UPI0001C11FE0,UniRef:UniRef100_A0A2S6DP21,UniRef:UniRef50_A0A389PV50,UniRef:UniRef90_A0A389PV50;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2717631	2718296	.	-	.	ID=GCA000144955_02656_gene;locus_tag=GCA000144955_02656;gene=nsaR
contig_1	Pyrodigal	CDS	2717631	2718296	.	-	0	ID=GCA000144955_02656;Name=nisin susceptibility-associated two-component system response regulator NsaR;locus_tag=GCA000144955_02656;product=nisin susceptibility-associated two-component system response regulator NsaR;gene=nsaR;Parent=GCA000144955_02656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000697886,COG:COG0745,COG:TK,RefSeq:WP_000697884.1,SO:0001217,UniParc:UPI0001DD9885,UniRef:UniRef100_A0A6B1RSX8,UniRef:UniRef50_A0A371ILZ4,UniRef:UniRef90_A0A5F0HLH2
contig_1	Pyrodigal	gene	2718322	2718522	.	-	.	ID=GCA000144955_02657_gene;locus_tag=GCA000144955_02657
contig_1	Pyrodigal	CDS	2718322	2718522	.	-	0	ID=GCA000144955_02657;Name=hypothetical protein;locus_tag=GCA000144955_02657;product=hypothetical protein;Parent=GCA000144955_02657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000604726.1,SO:0001217,UniParc:UPI0002E2AC6B,UniRef:UniRef100_UPI0002E2AC6B,UniRef:UniRef50_Q2FUY8,UniRef:UniRef90_Q2FUY8
contig_1	Pyrodigal	gene	2718720	2720144	.	+	.	ID=GCA000144955_02658_gene;locus_tag=GCA000144955_02658;gene=phoA
contig_1	Pyrodigal	CDS	2718720	2720144	.	+	0	ID=GCA000144955_02658;Name=Alkaline phosphatase 3;locus_tag=GCA000144955_02658;product=Alkaline phosphatase 3;gene=phoA;Parent=GCA000144955_02658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1785,COG:PR,KEGG:K01077,RefSeq:WP_000953737.1,SO:0001217,UniParc:UPI0001DD9887,UniRef:UniRef100_UPI0001DD9887,UniRef:UniRef50_A0A0U1MVV2,UniRef:UniRef90_A0A0U1MVV2;ec_number=3.1.3.1
contig_1	Infernal	gene	2719503	2719606	.	-	.	ID=GCA000144955_02659_gene;locus_tag=GCA000144955_02659;gene=sau-13
contig_1	Infernal	ncRNA	2719503	2719606	1.1e-18	-	.	ID=GCA000144955_02659;Name=Staphylococcus sRNA sau-13;locus_tag=GCA000144955_02659;product=Staphylococcus sRNA sau-13;Dbxref=RFAM:RF02385;Parent=GCA000144955_02659_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02385
contig_1	Pyrodigal	gene	2720204	2720308	.	-	.	ID=GCA000144955_02660_gene;locus_tag=GCA000144955_02660
contig_1	Pyrodigal	CDS	2720204	2720308	.	-	0	ID=GCA000144955_02660;Name=SE2200 family small protein;locus_tag=GCA000144955_02660;product=SE2200 family small protein;Parent=GCA000144955_02660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00006E454A,UniRef:UniRef100_P60876,UniRef:UniRef50_P60876,UniRef:UniRef90_P60876
contig_1	Pyrodigal	gene	2720427	2720882	.	-	.	ID=GCA000144955_02661_gene;locus_tag=GCA000144955_02661;gene=marR
contig_1	Pyrodigal	CDS	2720427	2720882	.	-	0	ID=GCA000144955_02661;Name=HTH marR-type domain-containing protein;locus_tag=GCA000144955_02661;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000144955_02661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000106185.1,SO:0001217,UniParc:UPI0000054925,UniRef:UniRef100_Q2FUY4,UniRef:UniRef50_Q2FUY4,UniRef:UniRef90_Q2FUY4
contig_1	Pyrodigal	gene	2721127	2721888	.	-	.	ID=GCA000144955_02662_gene;locus_tag=GCA000144955_02662;gene=frmB
contig_1	Pyrodigal	CDS	2721127	2721888	.	-	0	ID=GCA000144955_02662;Name=S-formylglutathione hydrolase;locus_tag=GCA000144955_02662;product=S-formylglutathione hydrolase;gene=frmB;Parent=GCA000144955_02662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0627,COG:V,RefSeq:WP_000323443.1,SO:0001217,UniParc:UPI0001DD9888,UniRef:UniRef100_A0AA40MGD9,UniRef:UniRef50_Q2FUY3,UniRef:UniRef90_Q2FUY3
contig_1	Pyrodigal	gene	2722004	2724781	.	-	.	ID=GCA000144955_02663_gene;locus_tag=GCA000144955_02663;gene=clfB
contig_1	Pyrodigal	CDS	2722004	2724781	.	-	0	ID=GCA000144955_02663;Name=Clumping factor B%2C adhesin;locus_tag=GCA000144955_02663;product=Clumping factor B%2C adhesin;Dbxref=GO:0005576,GO:0007155;gene=clfB;Parent=GCA000144955_02663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_103245977.1,SO:0001217,UniParc:UPI000CD06FE6,UniRef:UniRef100_UPI000CD06FE6,UniRef:UniRef50_Q5HCR7,UniRef:UniRef90_Q5HCR7,VFDB:VFC0001,VFDB:VFG001290
contig_1	Pyrodigal	gene	2725131	2725835	.	-	.	ID=GCA000144955_02664_gene;locus_tag=GCA000144955_02664;gene=arcR
contig_1	Pyrodigal	CDS	2725131	2725835	.	-	0	ID=GCA000144955_02664;Name=HTH-type transcriptional regulator ArcR;locus_tag=GCA000144955_02664;product=HTH-type transcriptional regulator ArcR;Dbxref=GO:0003677,GO:0005737,GO:0030552;gene=arcR;Parent=GCA000144955_02664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,KEGG:K21828,RefSeq:WP_000138218.1,SO:0001217,UniParc:UPI00000CAC67,UniRef:UniRef100_Q99R06,UniRef:UniRef50_Q2FUY1,UniRef:UniRef90_Q2FUY1
contig_1	Pyrodigal	gene	2725934	2726875	.	-	.	ID=GCA000144955_02665_gene;locus_tag=GCA000144955_02665;gene=arcC
contig_1	Pyrodigal	CDS	2725934	2726875	.	-	0	ID=GCA000144955_02665;Name=carbamate kinase;locus_tag=GCA000144955_02665;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000144955_02665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000660032.1,SO:0001217,UniParc:UPI0001DD988A,UniRef:UniRef100_A0A2S6D250,UniRef:UniRef50_P0A2X7,UniRef:UniRef90_P63555;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	2726892	2728322	.	-	.	ID=GCA000144955_02666_gene;locus_tag=GCA000144955_02666;gene=arcD
contig_1	Pyrodigal	CDS	2726892	2728322	.	-	0	ID=GCA000144955_02666;Name=arginine-ornithine antiporter;locus_tag=GCA000144955_02666;product=arginine-ornithine antiporter;Dbxref=GO:0005886,GO:0006527,GO:0043858,GO:1903826;gene=arcD;Parent=GCA000144955_02666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,KEGG:K03758,RefSeq:WP_001005837.1,SO:0001217,UniParc:UPI0001DD988B,UniRef:UniRef100_UPI0001DD988B,UniRef:UniRef50_A0A0Y9RFY3,UniRef:UniRef90_A0A0Y9RFY3
contig_1	Pyrodigal	gene	2728413	2729423	.	-	.	ID=GCA000144955_02667_gene;locus_tag=GCA000144955_02667;gene=argF
contig_1	Pyrodigal	CDS	2728413	2729423	.	-	0	ID=GCA000144955_02667;Name=ornithine carbamoyltransferase;locus_tag=GCA000144955_02667;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0019547,GO:0042450;gene=argF;Parent=GCA000144955_02667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000136160.1,SO:0001217,UniParc:UPI0001DD988C,UniRef:UniRef100_UPI0001DD988C,UniRef:UniRef50_P08308,UniRef:UniRef90_P65601;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	2729456	2730691	.	-	.	ID=GCA000144955_02668_gene;locus_tag=GCA000144955_02668;gene=arcA
contig_1	Pyrodigal	CDS	2729456	2730691	.	-	0	ID=GCA000144955_02668;Name=arginine deiminase;locus_tag=GCA000144955_02668;product=arginine deiminase;Dbxref=GO:0005737,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000144955_02668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2235,COG:E,RefSeq:WP_000129407.1,SO:0001217,UniParc:UPI0001DD988D,UniRef:UniRef100_UPI0001DD988D,UniRef:UniRef50_O86131,UniRef:UniRef90_Q2FUX7;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	2731038	2731487	.	-	.	ID=GCA000144955_02669_gene;locus_tag=GCA000144955_02669;gene=argR
contig_1	Pyrodigal	CDS	2731038	2731487	.	-	0	ID=GCA000144955_02669;Name=Arginine repressor;locus_tag=GCA000144955_02669;product=Arginine repressor;gene=argR;Parent=GCA000144955_02669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,RefSeq:WP_000748760.1,SO:0001217,UniParc:UPI00000D7654,UniRef:UniRef100_Q2FUX5,UniRef:UniRef50_A0A2K4AHB6,UniRef:UniRef90_A0A2K4AHB6
contig_1	Pyrodigal	gene	2731854	2733383	.	-	.	ID=GCA000144955_02670_gene;locus_tag=GCA000144955_02670;gene=aur
contig_1	Pyrodigal	CDS	2731854	2733383	.	-	0	ID=GCA000144955_02670;Name=zinc metalloproteinase aureolysin;locus_tag=GCA000144955_02670;product=zinc metalloproteinase aureolysin;Dbxref=GO:0004222,GO:0006508,GO:0046872;gene=aur;Parent=GCA000144955_02670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001225028,COG:COG3227,COG:O,KEGG:K01401,NCBIProtein:EHO93748.1,RefSeq:WP_001225027.1,SO:0001217,UniParc:UPI00015E3694,UniRef:UniRef100_A8QKD5,UniRef:UniRef50_P81177,UniRef:UniRef90_P81177;ec_number=3.4.24.29
contig_1	Pyrodigal	gene	2733807	2734334	.	-	.	ID=GCA000144955_02671_gene;locus_tag=GCA000144955_02671;gene=isaB
contig_1	Pyrodigal	CDS	2733807	2734334	.	-	0	ID=GCA000144955_02671;Name=immunodominant staphylococcal antigen IsaB;locus_tag=GCA000144955_02671;product=immunodominant staphylococcal antigen IsaB;Dbxref=GO:0005576;gene=isaB;Parent=GCA000144955_02671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001044560,BlastRules:WP_001077096,RefSeq:WP_001044558.1,SO:0001217,UniParc:UPI0001DD988E,UniRef:UniRef100_UPI0001DD988E,UniRef:UniRef50_Q2FUX3,UniRef:UniRef90_Q2FUX3
contig_1	Pyrodigal	gene	2734592	2735050	.	+	.	ID=GCA000144955_02672_gene;locus_tag=GCA000144955_02672
contig_1	Pyrodigal	CDS	2734592	2735050	.	+	0	ID=GCA000144955_02672;Name=Low-complexity protein;locus_tag=GCA000144955_02672;product=Low-complexity protein;Parent=GCA000144955_02672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000734796.1,SO:0001217,UniParc:UPI0001DD988F,UniRef:UniRef100_UPI0001DD988F,UniRef:UniRef50_Q2FUX2,UniRef:UniRef90_Q2FUX2
contig_1	Pyrodigal	gene	2735290	2737164	.	+	.	ID=GCA000144955_02673_gene;locus_tag=GCA000144955_02673;gene=bglG
contig_1	Pyrodigal	CDS	2735290	2737164	.	+	0	ID=GCA000144955_02673;Name=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;locus_tag=GCA000144955_02673;product=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;gene=bglG;Parent=GCA000144955_02673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K02538,RefSeq:WP_000887024.1,SO:0001217,UniParc:UPI0001DD9A24,UniRef:UniRef100_UPI0001DD9A24,UniRef:UniRef50_A0A2I7YB65,UniRef:UniRef90_A0A2I7YB65
contig_1	Pyrodigal	gene	2737241	2739193	.	+	.	ID=GCA000144955_02674_gene;locus_tag=GCA000144955_02674;gene=ptsN
contig_1	Pyrodigal	CDS	2737241	2739193	.	+	0	ID=GCA000144955_02674;Name=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;locus_tag=GCA000144955_02674;product=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;gene=ptsN;Parent=GCA000144955_02674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000706106.1,SO:0001217,UniParc:UPI0001DD9A25,UniRef:UniRef100_UPI0001DD9A25,UniRef:UniRef50_O31645,UniRef:UniRef90_A0A0U1MW07
contig_1	Pyrodigal	gene	2739207	2740145	.	+	.	ID=GCA000144955_02675_gene;locus_tag=GCA000144955_02675;gene=manA
contig_1	Pyrodigal	CDS	2739207	2740145	.	+	0	ID=GCA000144955_02675;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000144955_02675;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000144955_02675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001173209.1,SO:0001217,UniParc:UPI0001DD9A26,UniRef:UniRef100_UPI0001DD9A26,UniRef:UniRef50_Q59935,UniRef:UniRef90_A0A0D1I542;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2740257	2743238	.	-	.	ID=GCA000144955_02676_gene;locus_tag=GCA000144955_02676;gene=yhgE
contig_1	Pyrodigal	CDS	2740257	2743238	.	-	0	ID=GCA000144955_02676;Name=Phage infection protein%2C putative;locus_tag=GCA000144955_02676;product=Phage infection protein%2C putative;gene=yhgE;Parent=GCA000144955_02676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000786118.1,SO:0001217,UniParc:UPI0001DD9A27,UniRef:UniRef100_UPI0001DD9A27,UniRef:UniRef50_Q49UI0,UniRef:UniRef90_Q2G221
contig_1	Pyrodigal	gene	2743449	2745308	.	+	.	ID=GCA000144955_02677_gene;locus_tag=GCA000144955_02677
contig_1	Pyrodigal	CDS	2743449	2745308	.	+	0	ID=GCA000144955_02677;Name=amidase domain-containing protein;locus_tag=GCA000144955_02677;product=amidase domain-containing protein;Dbxref=GO:0004040,GO:0005576;Parent=GCA000144955_02677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_001125627.1,SO:0001217,UniParc:UPI0001DD9A28,UniRef:UniRef100_UPI0001DD9A28,UniRef:UniRef50_Q2G222,UniRef:UniRef90_Q2G222
contig_1	Pyrodigal	gene	2745575	2746135	.	-	.	ID=GCA000144955_02678_gene;locus_tag=GCA000144955_02678;gene=pncA
contig_1	Pyrodigal	CDS	2745575	2746135	.	-	0	ID=GCA000144955_02678;Name=Isochorismatase-like domain-containing protein;locus_tag=GCA000144955_02678;product=Isochorismatase-like domain-containing protein;gene=pncA;Parent=GCA000144955_02678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000088195.1,SO:0001217,UniParc:UPI00000D7800,UniRef:UniRef100_Q2G220,UniRef:UniRef50_Q2G220,UniRef:UniRef90_Q2G220
contig_1	Pyrodigal	gene	2746305	2748212	.	-	.	ID=GCA000144955_02679_gene;locus_tag=GCA000144955_02679;gene=sasF
contig_1	Pyrodigal	CDS	2746305	2748212	.	-	0	ID=GCA000144955_02679;Name=Surface protein F;locus_tag=GCA000144955_02679;product=Surface protein F;Dbxref=GO:0005576;gene=sasF;Parent=GCA000144955_02679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001151910.1,SO:0001217,UniParc:UPI0001DD9A29,UniRef:UniRef100_UPI0001DD9A29,UniRef:UniRef50_Q2FUW9,UniRef:UniRef90_Q2FUW9
contig_1	Pyrodigal	gene	2748453	2749811	.	-	.	ID=GCA000144955_02680_gene;locus_tag=GCA000144955_02680;gene=gtfB
contig_1	Pyrodigal	CDS	2748453	2749811	.	-	0	ID=GCA000144955_02680;Name=accessory Sec system glycosylation chaperone GtfB;locus_tag=GCA000144955_02680;product=accessory Sec system glycosylation chaperone GtfB;Dbxref=GO:0031647;gene=gtfB;Parent=GCA000144955_02680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000593656.1,SO:0001217,UniParc:UPI0001DD9A2A,UniRef:UniRef100_UPI0001DD9A2A,UniRef:UniRef50_A0A7U7PX78,UniRef:UniRef90_A0A5S9I5Q0
contig_1	Pyrodigal	gene	2749804	2751312	.	-	.	ID=GCA000144955_02681_gene;locus_tag=GCA000144955_02681;gene=gtfA
contig_1	Pyrodigal	CDS	2749804	2751312	.	-	0	ID=GCA000144955_02681;Name=accessory Sec system glycosyltransferase GtfA;locus_tag=GCA000144955_02681;product=accessory Sec system glycosyltransferase GtfA;Dbxref=GO:0016757;gene=gtfA;Parent=GCA000144955_02681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000158413.1,SO:0001217,UniParc:UPI0001DD9A2B,UniRef:UniRef100_UPI0001DD9A2B,UniRef:UniRef50_A0A077UJB5,UniRef:UniRef90_A0A390ZTZ9
contig_1	Pyrodigal	gene	2751330	2753720	.	-	.	ID=GCA000144955_02682_gene;locus_tag=GCA000144955_02682;gene=secA2
contig_1	Pyrodigal	CDS	2751330	2753720	.	-	0	ID=GCA000144955_02682;Name=accessory Sec system translocase SecA2;locus_tag=GCA000144955_02682;product=accessory Sec system translocase SecA2;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0008564,GO:0015031,GO:0015450,GO:0017038,GO:0031522,GO:0043952,GO:0065002;gene=secA2;Parent=GCA000144955_02682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,RefSeq:WP_000680939.1,SO:0001217,UniParc:UPI0001DD9A2C,UniRef:UniRef100_UPI0001DD9A2C,UniRef:UniRef50_Q2FUW6,UniRef:UniRef90_Q2FUW6;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	2753710	2754669	.	-	.	ID=GCA000144955_02683_gene;locus_tag=GCA000144955_02683;gene=asp3
contig_1	Pyrodigal	CDS	2753710	2754669	.	-	0	ID=GCA000144955_02683;Name=accessory Sec system protein Asp3;locus_tag=GCA000144955_02683;product=accessory Sec system protein Asp3;Dbxref=GO:0006886,GO:0015031;gene=asp3;Parent=GCA000144955_02683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12270,RefSeq:WP_000916726.1,SO:0001217,UniParc:UPI0001DD9A2D,UniRef:UniRef100_UPI0001DD9A2D,UniRef:UniRef50_Q2FUW5,UniRef:UniRef90_Q2FUW5
contig_1	Pyrodigal	gene	2754647	2756218	.	-	.	ID=GCA000144955_02684_gene;locus_tag=GCA000144955_02684;gene=asp2
contig_1	Pyrodigal	CDS	2754647	2756218	.	-	0	ID=GCA000144955_02684;Name=accessory Sec system protein Asp2;locus_tag=GCA000144955_02684;product=accessory Sec system protein Asp2;Dbxref=GO:0006886,GO:0015031;gene=asp2;Parent=GCA000144955_02684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12269,SO:0001217,UniRef:UniRef50_Q2FUW4,UniRef:UniRef90_Q2FUW4
contig_1	Pyrodigal	gene	2756205	2757758	.	-	.	ID=GCA000144955_02685_gene;locus_tag=GCA000144955_02685;gene=asp1
contig_1	Pyrodigal	CDS	2756205	2757758	.	-	0	ID=GCA000144955_02685;Name=accessory Sec system protein Asp1;locus_tag=GCA000144955_02685;product=accessory Sec system protein Asp1;Dbxref=GO:0006886,GO:0015031;gene=asp1;Parent=GCA000144955_02685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000873222.1,SO:0001217,UniParc:UPI0001DD9A2F,UniRef:UniRef100_UPI0001DD9A2F,UniRef:UniRef50_Q2FUW3,UniRef:UniRef90_Q2FUW3
contig_1	Pyrodigal	gene	2757769	2758980	.	-	.	ID=GCA000144955_02686_gene;locus_tag=GCA000144955_02686;gene=secY2
contig_1	Pyrodigal	CDS	2757769	2758980	.	-	0	ID=GCA000144955_02686;Name=accessory Sec system protein translocase subunit SecY2;locus_tag=GCA000144955_02686;product=accessory Sec system protein translocase subunit SecY2;Dbxref=GO:0005886,GO:0006605,GO:0065002;gene=secY2;Parent=GCA000144955_02686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000916114.1,SO:0001217,UniParc:UPI0001DD9A30,UniRef:UniRef100_UPI0001DD9A30,UniRef:UniRef50_Q2FUW2,UniRef:UniRef90_Q2FUW2
contig_1	Pyrodigal	gene	2759109	2765561	.	-	.	ID=GCA000144955_02687_gene;locus_tag=GCA000144955_02687;gene=sraP
contig_1	Pyrodigal	CDS	2759109	2765561	.	-	0	ID=GCA000144955_02687;Name=Serine-rich adhesin for platelets;locus_tag=GCA000144955_02687;product=Serine-rich adhesin for platelets;Dbxref=GO:0005509,GO:0005576,GO:0007155,GO:0016020;gene=sraP;Parent=GCA000144955_02687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000044568.1,SO:0001217,UniParc:UPI0001DD9A31,UniRef:UniRef100_UPI0001DD9A31,UniRef:UniRef50_Q2FUW1,UniRef:UniRef90_Q2FUW1
contig_1	Pyrodigal	gene	2766107	2766799	.	-	.	ID=GCA000144955_02688_gene;locus_tag=GCA000144955_02688;gene=rutF
contig_1	Pyrodigal	CDS	2766107	2766799	.	-	0	ID=GCA000144955_02688;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000144955_02688;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000144955_02688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_001109880.1,SO:0001217,UniParc:UPI0001DD9A32,UniRef:UniRef100_UPI0001DD9A32,UniRef:UniRef50_K8DVZ2,UniRef:UniRef90_K8DWD5
contig_1	Pyrodigal	gene	2767122	2767886	.	+	.	ID=GCA000144955_02689_gene;locus_tag=GCA000144955_02689
contig_1	Pyrodigal	CDS	2767122	2767886	.	+	0	ID=GCA000144955_02689;Name=Lipoprotein;locus_tag=GCA000144955_02689;product=Lipoprotein;Parent=GCA000144955_02689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A853UZX6
contig_1	Pyrodigal	gene	2768041	2768343	.	+	.	ID=GCA000144955_02690_gene;locus_tag=GCA000144955_02690
contig_1	Pyrodigal	CDS	2768041	2768343	.	+	0	ID=GCA000144955_02690;Name=Phage protein;locus_tag=GCA000144955_02690;product=Phage protein;Parent=GCA000144955_02690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001260048.1,SO:0001217,UniParc:UPI0001DD9A34,UniRef:UniRef100_UPI0001DD9A34,UniRef:UniRef50_A0A7U7PXN0,UniRef:UniRef90_Q2FUV8
contig_1	Pyrodigal	gene	2768497	2768856	.	+	.	ID=GCA000144955_02691_gene;locus_tag=GCA000144955_02691;gene=doxX
contig_1	Pyrodigal	CDS	2768497	2768856	.	+	0	ID=GCA000144955_02691;Name=DoxX family protein;locus_tag=GCA000144955_02691;product=DoxX family protein;gene=doxX;Parent=GCA000144955_02691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000603483.1,SO:0001217,UniParc:UPI0001DD9A35,UniRef:UniRef100_UPI0001DD9A35,UniRef:UniRef50_A0A1E9AB62,UniRef:UniRef90_Q2FUV7
contig_1	Pyrodigal	gene	2768941	2769552	.	-	.	ID=GCA000144955_02692_gene;locus_tag=GCA000144955_02692;gene=rutF
contig_1	Pyrodigal	CDS	2768941	2769552	.	-	0	ID=GCA000144955_02692;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000144955_02692;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000144955_02692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_000287920.1,SO:0001217,UniParc:UPI0001DD9A36,UniRef:UniRef100_UPI0001DD9A36,UniRef:UniRef50_F4BMC7,UniRef:UniRef90_A0A7U7JRS4
contig_1	Pyrodigal	gene	2769631	2770107	.	-	.	ID=GCA000144955_02693_gene;locus_tag=GCA000144955_02693;gene=msrA
contig_1	Pyrodigal	CDS	2769631	2770107	.	-	0	ID=GCA000144955_02693;Name=peptide-methionine (S)-S-oxide reductase;locus_tag=GCA000144955_02693;product=peptide-methionine (S)-S-oxide reductase;Dbxref=GO:0008113;gene=msrA;Parent=GCA000144955_02693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_000301931.1,SO:0001217,UniParc:UPI0001DD9A37,UniRef:UniRef100_UPI0001DD9A37,UniRef:UniRef50_M7NDY9,UniRef:UniRef90_A0A131HWZ4;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	2770110	2770610	.	-	.	ID=GCA000144955_02694_gene;locus_tag=GCA000144955_02694;gene=yhbS
contig_1	Pyrodigal	CDS	2770110	2770610	.	-	0	ID=GCA000144955_02694;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02694;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000144955_02694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_000244265.1,SO:0001217,UniParc:UPI0001DD9A38,UniRef:UniRef100_UPI0001DD9A38,UniRef:UniRef50_Q2FUV4,UniRef:UniRef90_Q2FUV4
contig_1	Pyrodigal	gene	2770845	2771612	.	-	.	ID=GCA000144955_02695_gene;locus_tag=GCA000144955_02695;gene=ywqE
contig_1	Pyrodigal	CDS	2770845	2771612	.	-	0	ID=GCA000144955_02695;Name=Tyrosine-protein phosphatase;locus_tag=GCA000144955_02695;product=Tyrosine-protein phosphatase;gene=ywqE;Parent=GCA000144955_02695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4464,COG:T,RefSeq:WP_000565312.1,SO:0001217,UniParc:UPI00003B19E7,UniRef:UniRef100_A0A7Z7W355,UniRef:UniRef50_P39852,UniRef:UniRef90_A0A0U1MU51
contig_1	Pyrodigal	gene	2771609	2772301	.	-	.	ID=GCA000144955_02696_gene;locus_tag=GCA000144955_02696;gene=mrp
contig_1	Pyrodigal	CDS	2771609	2772301	.	-	0	ID=GCA000144955_02696;Name=non-specific protein-tyrosine kinase;locus_tag=GCA000144955_02696;product=non-specific protein-tyrosine kinase;gene=mrp;Parent=GCA000144955_02696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000185861.1,SO:0001217,UniParc:UPI00015E18DA,UniRef:UniRef100_A8YPQ5,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ5
contig_1	Pyrodigal	gene	2772318	2772980	.	-	.	ID=GCA000144955_02697_gene;locus_tag=GCA000144955_02697;gene=capA
contig_1	Pyrodigal	CDS	2772318	2772980	.	-	0	ID=GCA000144955_02697;Name=Capsular polysaccharide biosynthesis protein CapA;locus_tag=GCA000144955_02697;product=Capsular polysaccharide biosynthesis protein CapA;Dbxref=GO:0004713,GO:0005886,GO:0045227;gene=capA;Parent=GCA000144955_02697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3944,COG:M,RefSeq:WP_000659677.1,SO:0001217,UniParc:UPI00003B19E9,UniRef:UniRef100_Q6GDE0,UniRef:UniRef50_Q5HCN3,UniRef:UniRef90_Q5HCN3
contig_1	Pyrodigal	gene	2773830	2774390	.	-	.	ID=GCA000144955_02698_gene;locus_tag=GCA000144955_02698;gene=icaR
contig_1	Pyrodigal	CDS	2773830	2774390	.	-	0	ID=GCA000144955_02698;Name=ica operon transcriptional regulator IcaR;locus_tag=GCA000144955_02698;product=ica operon transcriptional regulator IcaR;Dbxref=GO:0003677;gene=icaR;Parent=GCA000144955_02698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000653261,COG:COG1309,COG:K,RefSeq:WP_000653257.1,SO:0001217,UniParc:UPI0001DD9A39,UniRef:UniRef100_A0A0D1JN17,UniRef:UniRef50_Q5HKQ1,UniRef:UniRef90_Q9RQQ0
contig_1	Infernal	regulatory_region	2774388	2774462	2e-17	-	.	ID=BPGLLONNDN_162;Name=icaR 5' UTR;product=icaR 5' UTR;Dbxref=RFAM:RF02661;inference=profile:Rfam:RF02661;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2774554	2775792	.	+	.	ID=GCA000144955_02699_gene;locus_tag=GCA000144955_02699;gene=icaA
contig_1	Pyrodigal	CDS	2774554	2775792	.	+	0	ID=GCA000144955_02699;Name=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000144955_02699;product=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0005886,GO:0008375,GO:0042710,GO:0043708;gene=icaA;Parent=GCA000144955_02699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,RefSeq:WP_001159430.1,SO:0001217,UniParc:UPI00000CAC33,UniRef:UniRef100_Q9RQP9,UniRef:UniRef50_Q5HKQ0,UniRef:UniRef90_Q9RQP9,VFDB:VFC0271,VFDB:VFG001285;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2775756	2776061	.	+	.	ID=GCA000144955_02700_gene;locus_tag=GCA000144955_02700;gene=icaD
contig_1	Pyrodigal	CDS	2775756	2776061	.	+	0	ID=GCA000144955_02700;Name=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000144955_02700;product=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005886,GO:0008375;gene=icaD;Parent=GCA000144955_02700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21461,RefSeq:WP_000240581.1,SO:0001217,UniParc:UPI0001DD9A3A,UniRef:UniRef100_UPI0001DD9A3A,UniRef:UniRef50_Q5HKP9,UniRef:UniRef90_Q9RQP8,VFDB:VFC0271,VFDB:VFG001286
contig_1	Pyrodigal	gene	2776058	2776930	.	+	.	ID=GCA000144955_02701_gene;locus_tag=GCA000144955_02701;gene=icaB
contig_1	Pyrodigal	CDS	2776058	2776930	.	+	0	ID=GCA000144955_02701;Name=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000144955_02701;product=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005576,GO:0005975,GO:0016811,GO:0019213;gene=icaB;Parent=GCA000144955_02701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0726,COG:GM,KEGG:K21478,RefSeq:WP_000877362.1,SO:0001217,UniParc:UPI0001B3B02E,UniRef:UniRef100_A0A5D3UEU8,UniRef:UniRef50_Q9RQP7,UniRef:UniRef90_Q9RQP7,VFDB:VFC0271,VFDB:VFG001287;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	2776917	2777969	.	+	.	ID=GCA000144955_02702_gene;locus_tag=GCA000144955_02702;gene=icaC
contig_1	Pyrodigal	CDS	2776917	2777969	.	+	0	ID=GCA000144955_02702;Name=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;locus_tag=GCA000144955_02702;product=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;Dbxref=GO:0005886,GO:0009246,GO:0016413;gene=icaC;Parent=GCA000144955_02702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723836,BlastRules:WP_002470903,COG:COG3936,COG:G,KEGG:K21462,NCBIProtein:AUU58561.1,RefSeq:WP_000723828.1,SO:0001217,UniParc:UPI0001DD9BCA,UniRef:UniRef100_UPI0001DD9BCA,UniRef:UniRef50_Q5HKP7,UniRef:UniRef90_Q9RQP6
contig_1	Pyrodigal	gene	2778275	2780320	.	-	.	ID=GCA000144955_02703_gene;locus_tag=GCA000144955_02703;gene=lip1
contig_1	Pyrodigal	CDS	2778275	2780320	.	-	0	ID=GCA000144955_02703;Name=YSIRK domain-containing triacylglycerol lipase Lip1;locus_tag=GCA000144955_02703;product=YSIRK domain-containing triacylglycerol lipase Lip1;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=lip1;Parent=GCA000144955_02703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000842036,COG:COG1075,COG:I,KEGG:K01046,SO:0001217,UniRef:UniRef50_Q6GDD3,UniRef:UniRef90_P65288;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	2781038	2781301	.	-	.	ID=GCA000144955_02704_gene;locus_tag=GCA000144955_02704
contig_1	Pyrodigal	CDS	2781038	2781301	.	-	0	ID=GCA000144955_02704;Name=DUF5079 domain-containing protein;locus_tag=GCA000144955_02704;product=DUF5079 domain-containing protein;Parent=GCA000144955_02704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2K4FBG0,UniRef:UniRef90_A0A2S6D477
contig_1	Pyrodigal	gene	2781311	2781829	.	-	.	ID=GCA000144955_02705_gene;locus_tag=GCA000144955_02705
contig_1	Pyrodigal	CDS	2781311	2781829	.	-	0	ID=GCA000144955_02705;Name=hypothetical protein;locus_tag=GCA000144955_02705;product=hypothetical protein;Parent=GCA000144955_02705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000226606.1,SO:0001217,UniParc:UPI0001DD9BCD,UniRef:UniRef100_UPI0001DD9BCD,UniRef:UniRef50_UPI001F054270,UniRef:UniRef90_UPI0001DD9BCD
contig_1	Pyrodigal	gene	2782145	2782777	.	-	.	ID=GCA000144955_02706_gene;locus_tag=GCA000144955_02706;gene=hisIE
contig_1	Pyrodigal	CDS	2782145	2782777	.	-	0	ID=GCA000144955_02706;Name=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;locus_tag=GCA000144955_02706;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;Dbxref=GO:0000105,GO:0004635,GO:0004636,GO:0005524,GO:0005737;gene=hisIE;Parent=GCA000144955_02706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q8CQ91,UniRef:UniRef90_Q5HCM5;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	2782774	2783532	.	-	.	ID=GCA000144955_02707_gene;locus_tag=GCA000144955_02707;gene=hisF
contig_1	Pyrodigal	CDS	2782774	2783532	.	-	0	ID=GCA000144955_02707;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000144955_02707;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000144955_02707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q9X0C6,UniRef:UniRef90_P64361;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2783529	2784233	.	-	.	ID=GCA000144955_02708_gene;locus_tag=GCA000144955_02708;gene=hisA
contig_1	Pyrodigal	CDS	2783529	2784233	.	-	0	ID=GCA000144955_02708;Name=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;locus_tag=GCA000144955_02708;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0005737;gene=hisA;Parent=GCA000144955_02708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,RefSeq:WP_000571734.1,SO:0001217,UniParc:UPI0001DD9BD0,UniRef:UniRef100_UPI0001DD9BD0,UniRef:UniRef50_Q2FUU2,UniRef:UniRef90_Q2FUU2;ec_number=5.3.1.16
contig_1	Pyrodigal	gene	2784226	2784804	.	-	.	ID=GCA000144955_02709_gene;locus_tag=GCA000144955_02709;gene=hisH
contig_1	Pyrodigal	CDS	2784226	2784804	.	-	0	ID=GCA000144955_02709;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000144955_02709;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0016829;gene=hisH;Parent=GCA000144955_02709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0118,COG:E,RefSeq:WP_000635618.1,SO:0001217,UniParc:UPI0001DD9BD1,UniRef:UniRef100_UPI0001DD9BD1,UniRef:UniRef50_Q4A047,UniRef:UniRef90_Q5HCM2;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2784801	2785379	.	-	.	ID=GCA000144955_02710_gene;locus_tag=GCA000144955_02710;gene=hisB
contig_1	Pyrodigal	CDS	2784801	2785379	.	-	0	ID=GCA000144955_02710;Name=imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000144955_02710;product=imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004424,GO:0005737;gene=hisB;Parent=GCA000144955_02710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0131,COG:E,RefSeq:WP_000640270.1,SO:0001217,UniParc:UPI00005FE875,UniRef:UniRef100_Q2YZ91,UniRef:UniRef50_Q2FUU0,UniRef:UniRef90_Q2FUU0;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	2785348	2786361	.	-	.	ID=GCA000144955_02711_gene;locus_tag=GCA000144955_02711;gene=hisC
contig_1	Pyrodigal	CDS	2785348	2786361	.	-	0	ID=GCA000144955_02711;Name=Putative pyridoxal phosphate-dependent acyltransferase;locus_tag=GCA000144955_02711;product=Putative pyridoxal phosphate-dependent acyltransferase;gene=hisC;Parent=GCA000144955_02711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,RefSeq:WP_000639178.1,SO:0001217,UniParc:UPI0001DD9BD2,UniRef:UniRef100_UPI0001DD9BD2,UniRef:UniRef50_A0A389Q8Y1,UniRef:UniRef90_A0A389Q8Y1
contig_1	Pyrodigal	gene	2786377	2787627	.	-	.	ID=GCA000144955_02712_gene;locus_tag=GCA000144955_02712;gene=hisD
contig_1	Pyrodigal	CDS	2786377	2787627	.	-	0	ID=GCA000144955_02712;Name=histidinol dehydrogenase;locus_tag=GCA000144955_02712;product=histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005829,GO:0008270,GO:0051287;gene=hisD;Parent=GCA000144955_02712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0141,COG:E,KEGG:K00013,RefSeq:WP_000930657.1,SO:0001217,UniParc:UPI0001DD9BD3,UniRef:UniRef100_UPI0001DD9BD3,UniRef:UniRef50_Q8CQ95,UniRef:UniRef90_P63952;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	2787620	2788234	.	-	.	ID=GCA000144955_02713_gene;locus_tag=GCA000144955_02713;gene=hisG
contig_1	Pyrodigal	CDS	2787620	2788234	.	-	0	ID=GCA000144955_02713;Name=ATP phosphoribosyltransferase;locus_tag=GCA000144955_02713;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0003879,GO:0005524,GO:0005737;gene=hisG;Parent=GCA000144955_02713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0040,COG:E,KEGG:K00765,RefSeq:WP_000944130.1,SO:0001217,UniParc:UPI0001DD9BD4,UniRef:UniRef100_UPI0001DD9BD4,UniRef:UniRef50_Q2FUT7,UniRef:UniRef90_Q2FUT7;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	2788252	2789070	.	-	.	ID=GCA000144955_02714_gene;locus_tag=GCA000144955_02714;gene=hisZ
contig_1	Pyrodigal	CDS	2788252	2789070	.	-	0	ID=GCA000144955_02714;Name=ATP phosphoribosyltransferase regulatory subunit;locus_tag=GCA000144955_02714;product=ATP phosphoribosyltransferase regulatory subunit;Dbxref=GO:0000105,GO:0005737,GO:0016740;gene=hisZ;Parent=GCA000144955_02714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3705,COG:E,RefSeq:WP_001065594.1,SO:0001217,UniParc:UPI0001DD9BD5,UniRef:UniRef100_UPI0001DD9BD5,UniRef:UniRef50_Q2FUT6,UniRef:UniRef90_Q2FUT6
contig_1	Pyrodigal	gene	2789374	2790498	.	-	.	ID=GCA000144955_02715_gene;locus_tag=GCA000144955_02715
contig_1	Pyrodigal	CDS	2789374	2790498	.	-	0	ID=GCA000144955_02715;Name=NodB-like y domain-containing protein;locus_tag=GCA000144955_02715;product=NodB-like y domain-containing protein;Parent=GCA000144955_02715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549218.1,SO:0001217,UniParc:UPI0001DD9BD6,UniRef:UniRef100_UPI0001DD9BD6,UniRef:UniRef50_Q2FUT5,UniRef:UniRef90_Q2FUT5
contig_1	Pyrodigal	gene	2790616	2791086	.	-	.	ID=GCA000144955_02716_gene;locus_tag=GCA000144955_02716;gene=rimL
contig_1	Pyrodigal	CDS	2790616	2791086	.	-	0	ID=GCA000144955_02716;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000144955_02716;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000144955_02716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000613128.1,SO:0001217,UniParc:UPI0001DD9BD7,UniRef:UniRef100_UPI000A104083,UniRef:UniRef50_Q2FUT4,UniRef:UniRef90_Q2FUT4
contig_1	Pyrodigal	gene	2791133	2791966	.	-	.	ID=GCA000144955_02717_gene;locus_tag=GCA000144955_02717;gene=ecfT
contig_1	Pyrodigal	CDS	2791133	2791966	.	-	0	ID=GCA000144955_02717;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000144955_02717;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000144955_02717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_001077817.1,SO:0001217,UniParc:UPI0001DD9BD8,UniRef:UniRef100_UPI0001DD9BD8,UniRef:UniRef50_A0A3A1YCN1,UniRef:UniRef90_Q2FUT3
contig_1	Pyrodigal	gene	2791963	2793675	.	-	.	ID=GCA000144955_02718_gene;locus_tag=GCA000144955_02718;gene=ecfA2
contig_1	Pyrodigal	CDS	2791963	2793675	.	-	0	ID=GCA000144955_02718;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000144955_02718;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000144955_02718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000138665.1,SO:0001217,UniParc:UPI0001DD9BD9,UniRef:UniRef100_UPI0001DD9BD9,UniRef:UniRef50_Q7A342,UniRef:UniRef90_Q7A342;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	2793728	2794282	.	-	.	ID=GCA000144955_02719_gene;locus_tag=GCA000144955_02719;gene=eCF-S
contig_1	Pyrodigal	CDS	2793728	2794282	.	-	0	ID=GCA000144955_02719;Name=ECF-type riboflavin transporter substrate-binding protein;locus_tag=GCA000144955_02719;product=ECF-type riboflavin transporter substrate-binding protein;Dbxref=GO:0005886,GO:0016020;gene=eCF-S;Parent=GCA000144955_02719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4720,COG:H,KEGG:K16924,RefSeq:WP_000743714.1,SO:0001217,UniParc:UPI00000DA04F,UniRef:UniRef100_Q8NUH7,UniRef:UniRef50_Q2FUT1,UniRef:UniRef90_Q2FUT1
contig_1	Pyrodigal	gene	2794311	2795159	.	-	.	ID=GCA000144955_02720_gene;locus_tag=GCA000144955_02720
contig_1	Pyrodigal	CDS	2794311	2795159	.	-	0	ID=GCA000144955_02720;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000144955_02720;product=DNA-directed RNA polymerase subunit delta;Parent=GCA000144955_02720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1912,COG:HV,RefSeq:WP_000528922.1,SO:0001217,UniParc:UPI00000D7673,UniRef:UniRef100_A0A2W3APS3,UniRef:UniRef50_A0A2L0D2I0,UniRef:UniRef90_Q2FUT0
contig_1	Pyrodigal	gene	2795543	2796058	.	+	.	ID=GCA000144955_02721_gene;locus_tag=GCA000144955_02721;gene=yceI
contig_1	Pyrodigal	CDS	2795543	2796058	.	+	0	ID=GCA000144955_02721;Name=UPF0312 protein SAOUHSC_03022;locus_tag=GCA000144955_02721;product=UPF0312 protein SAOUHSC_03022;gene=yceI;Parent=GCA000144955_02721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2353,COG:R,RefSeq:WP_000181130.1,SO:0001217,UniParc:UPI0001DD9BDA,UniRef:UniRef100_UPI0001DD9BDA,UniRef:UniRef50_Q2FUS9,UniRef:UniRef90_Q2FUS9
contig_1	Pyrodigal	gene	2796204	2797178	.	-	.	ID=GCA000144955_02722_gene;locus_tag=GCA000144955_02722;gene=drp35
contig_1	Pyrodigal	CDS	2796204	2797178	.	-	0	ID=GCA000144955_02722;Name=Lactonase drp35;locus_tag=GCA000144955_02722;product=Lactonase drp35;Dbxref=GO:0005737,GO:0016787,GO:0046872;gene=drp35;Parent=GCA000144955_02722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3386,COG:G,KEGG:K02352,SO:0001217,UniRef:UniRef50_Q9S0S3,UniRef:UniRef90_Q9S0S3;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2797419	2798375	.	+	.	ID=GCA000144955_02723_gene;locus_tag=GCA000144955_02723;gene=trhO
contig_1	Pyrodigal	CDS	2797419	2798375	.	+	0	ID=GCA000144955_02723;Name=rhodanese-related sulfurtransferase;locus_tag=GCA000144955_02723;product=rhodanese-related sulfurtransferase;Dbxref=GO:0006400,GO:0016705;gene=trhO;Parent=GCA000144955_02723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1054,COG:J,KEGG:K07146,RefSeq:WP_001109289.1,SO:0001217,UniParc:UPI0001DD9BDC,UniRef:UniRef100_UPI0001DD9BDC,UniRef:UniRef50_Q2NIJ6,UniRef:UniRef90_Q2FUS7;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2798525	2799163	.	+	.	ID=GCA000144955_02724_gene;locus_tag=GCA000144955_02724;gene=pcp
contig_1	Pyrodigal	CDS	2798525	2799163	.	+	0	ID=GCA000144955_02724;Name=pyroglutamyl-peptidase I;locus_tag=GCA000144955_02724;product=pyroglutamyl-peptidase I;Dbxref=GO:0005829,GO:0006508,GO:0008234,GO:0016920;gene=pcp;Parent=GCA000144955_02724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2039,COG:O,KEGG:K01304,RefSeq:WP_000547839.1,SO:0001217,UniParc:UPI0001DD9BDD,UniRef:UniRef100_UPI0001DD9BDD,UniRef:UniRef50_Q53596,UniRef:UniRef90_Q53596;ec_number=3.4.19.3
contig_1	Pyrodigal	gene	2799266	2799730	.	+	.	ID=GCA000144955_02725_gene;locus_tag=GCA000144955_02725;gene=bstA
contig_1	Pyrodigal	CDS	2799266	2799730	.	+	0	ID=GCA000144955_02725;Name=bacillithiol transferase BstA;locus_tag=GCA000144955_02725;product=bacillithiol transferase BstA;gene=bstA;Parent=GCA000144955_02725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000208915,BlastRules:WP_003243944,RefSeq:WP_000208916.1,SO:0001217,UniParc:UPI0001DD9BDE,UniRef:UniRef100_UPI0001DD9BDE,UniRef:UniRef50_Q2FUS3,UniRef:UniRef90_Q2FUS3
contig_1	Pyrodigal	gene	2799968	2801386	.	+	.	ID=GCA000144955_02726_gene;locus_tag=GCA000144955_02726;gene=citT
contig_1	Pyrodigal	CDS	2799968	2801386	.	+	0	ID=GCA000144955_02726;Name=2-oxoglutarate/malate translocator-like proteinue;locus_tag=GCA000144955_02726;product=2-oxoglutarate/malate translocator-like proteinue;gene=citT;Parent=GCA000144955_02726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,KEGG:K03319,RefSeq:WP_000432359.1,SO:0001217,UniParc:UPI0001DD9BDF,UniRef:UniRef100_UPI0001DD9BDF,UniRef:UniRef50_Q7WS08,UniRef:UniRef90_Q7WS08
contig_1	Pyrodigal	gene	2801804	2802721	.	-	.	ID=GCA000144955_02727_gene;locus_tag=GCA000144955_02727;gene=rarD
contig_1	Pyrodigal	CDS	2801804	2802721	.	-	0	ID=GCA000144955_02727;Name=EamA family transporter RarD;locus_tag=GCA000144955_02727;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA000144955_02727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_001091179.1,SO:0001217,UniParc:UPI0001DD9BE0,UniRef:UniRef100_UPI0001DD9BE0,UniRef:UniRef50_Q2FUS1,UniRef:UniRef90_Q2FUS1
contig_1	Pyrodigal	gene	2802943	2803518	.	+	.	ID=GCA000144955_02728_gene;locus_tag=GCA000144955_02728
contig_1	Pyrodigal	CDS	2802943	2803518	.	+	0	ID=GCA000144955_02728;Name=Putative DNA-binding protein;locus_tag=GCA000144955_02728;product=Putative DNA-binding protein;Parent=GCA000144955_02728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052924.1,SO:0001217,UniParc:UPI0001DD9BE1,UniRef:UniRef100_UPI0001DD9BE1,UniRef:UniRef50_Q2FUS0,UniRef:UniRef90_A0A7U7PWV8
contig_1	Pyrodigal	gene	2803651	2804703	.	+	.	ID=GCA000144955_02729_gene;locus_tag=GCA000144955_02729;gene=nixA
contig_1	Pyrodigal	CDS	2803651	2804703	.	+	0	ID=GCA000144955_02729;Name=Nickel transporter NixA;locus_tag=GCA000144955_02729;product=Nickel transporter NixA;Dbxref=GO:0005886,GO:0015099;gene=nixA;Parent=GCA000144955_02729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3376,COG:P,KEGG:K07241,SO:0001217,UniRef:UniRef50_Q2FUR9,UniRef:UniRef90_Q2FUR9
contig_1	Pyrodigal	gene	2804946	2805752	.	+	.	ID=GCA000144955_02730_gene;locus_tag=GCA000144955_02730
contig_1	Pyrodigal	CDS	2804946	2805752	.	+	0	ID=GCA000144955_02730;Name=N-hydroxyarylamine O-acetyltransferase;locus_tag=GCA000144955_02730;product=N-hydroxyarylamine O-acetyltransferase;Parent=GCA000144955_02730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001017419.1,SO:0001217,UniParc:UPI0001DD9BE3,UniRef:UniRef100_UPI0001DD9BE3,UniRef:UniRef50_Q2FUR8,UniRef:UniRef90_A0A077VMC4
contig_1	Pyrodigal	gene	2805874	2806386	.	-	.	ID=GCA000144955_02731_gene;locus_tag=GCA000144955_02731;gene=hdeD
contig_1	Pyrodigal	CDS	2805874	2806386	.	-	0	ID=GCA000144955_02731;Name=HdeD family acid-resistance protein;locus_tag=GCA000144955_02731;product=HdeD family acid-resistance protein;gene=hdeD;Parent=GCA000144955_02731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3247,COG:R,RefSeq:WP_001029677.1,SO:0001217,UniParc:UPI0001DD9BE4,UniRef:UniRef100_UPI0001DD9BE4,UniRef:UniRef50_Q2FUR7,UniRef:UniRef90_Q2FUR7
contig_1	Pyrodigal	gene	2806668	2807426	.	+	.	ID=GCA000144955_02732_gene;locus_tag=GCA000144955_02732;gene=vraD
contig_1	Pyrodigal	CDS	2806668	2807426	.	+	0	ID=GCA000144955_02732;Name=peptide resistance ABC transporter ATP-binding subunit VraD;locus_tag=GCA000144955_02732;product=peptide resistance ABC transporter ATP-binding subunit VraD;gene=vraD;Parent=GCA000144955_02732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000154162,COG:COG1136,COG:M,RefSeq:WP_000154162.1,SO:0001217,UniParc:UPI0000054977,UniRef:UniRef100_Q2FUR6,UniRef:UniRef50_O34697,UniRef:UniRef90_A0A0Z4JTA0
contig_1	Pyrodigal	gene	2807416	2809296	.	+	.	ID=GCA000144955_02733_gene;locus_tag=GCA000144955_02733;gene=vraE
contig_1	Pyrodigal	CDS	2807416	2809296	.	+	0	ID=GCA000144955_02733;Name=peptide resistance ABC transporter permease subunit VraE;locus_tag=GCA000144955_02733;product=peptide resistance ABC transporter permease subunit VraE;gene=vraE;Parent=GCA000144955_02733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143649,KEGG:K11632,RefSeq:WP_000143640.1,SO:0001217,UniParc:UPI0001DD9BE5,UniRef:UniRef100_UPI0001DD9BE5,UniRef:UniRef50_Q9KWJ6,UniRef:UniRef90_Q9KWJ6
contig_1	Pyrodigal	gene	2809390	2809581	.	+	.	ID=GCA000144955_02734_gene;locus_tag=GCA000144955_02734;gene=vraH
contig_1	Pyrodigal	CDS	2809390	2809581	.	+	0	ID=GCA000144955_02734;Name=peptide resistance ABC transporter activity modulator VraH;locus_tag=GCA000144955_02734;product=peptide resistance ABC transporter activity modulator VraH;gene=vraH;Parent=GCA000144955_02734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000672038,RefSeq:WP_000672030.1,SO:0001217,UniParc:UPI0001DD9BE6,UniRef:UniRef100_A0A5S9I5S8,UniRef:UniRef50_Q5HS20,UniRef:UniRef90_A0A3M9F5K0
contig_1	Pyrodigal	gene	2809973	2810173	.	+	.	ID=GCA000144955_02735_gene;locus_tag=GCA000144955_02735;gene=cspA
contig_1	Pyrodigal	CDS	2809973	2810173	.	+	0	ID=GCA000144955_02735;Name=Cold shock protein CspA;locus_tag=GCA000144955_02735;product=Cold shock protein CspA;gene=cspA;Parent=GCA000144955_02735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059079.1,SO:0001217,UniParc:UPI00000D77A7,UniRef:UniRef100_Q2FUQ9,UniRef:UniRef50_P0C0F1,UniRef:UniRef90_Q2FUQ9
contig_1	Pyrodigal	gene	2810300	2810869	.	-	.	ID=GCA000144955_02736_gene;locus_tag=GCA000144955_02736;gene=xRE
contig_1	Pyrodigal	CDS	2810300	2810869	.	-	0	ID=GCA000144955_02736;Name=Transcriptional regulator;locus_tag=GCA000144955_02736;product=Transcriptional regulator;gene=xRE;Parent=GCA000144955_02736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001054115.1,SO:0001217,UniParc:UPI0001DD9BE7,UniRef:UniRef100_UPI0001DD9BE7,UniRef:UniRef50_A0A0H2VIN2,UniRef:UniRef90_A0A391EYF8
contig_1	Pyrodigal	gene	2811129	2811524	.	-	.	ID=GCA000144955_02737_gene;locus_tag=GCA000144955_02737
contig_1	Pyrodigal	CDS	2811129	2811524	.	-	0	ID=GCA000144955_02737;Name=DUF3147 domain-containing protein;locus_tag=GCA000144955_02737;product=DUF3147 domain-containing protein;Parent=GCA000144955_02737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000779138.1,SO:0001217,UniParc:UPI0001DD9BE8,UniRef:UniRef100_A0A0U1MUX7,UniRef:UniRef50_Q2FUQ7,UniRef:UniRef90_Q2FUQ7
contig_1	Pyrodigal	gene	2811592	2811945	.	-	.	ID=GCA000144955_02738_gene;locus_tag=GCA000144955_02738
contig_1	Pyrodigal	CDS	2811592	2811945	.	-	0	ID=GCA000144955_02738;Name=Permease;locus_tag=GCA000144955_02738;product=Permease;Parent=GCA000144955_02738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000491385.1,SO:0001217,UniParc:UPI0001DD9BE9,UniRef:UniRef100_UPI0001DD9BE9,UniRef:UniRef50_Q2FUQ6,UniRef:UniRef90_Q2FUQ6
contig_1	Pyrodigal	gene	2812262	2813101	.	-	.	ID=GCA000144955_02739_gene;locus_tag=GCA000144955_02739;gene=noc
contig_1	Pyrodigal	CDS	2812262	2813101	.	-	0	ID=GCA000144955_02739;Name=nucleoid occlusion protein;locus_tag=GCA000144955_02739;product=nucleoid occlusion protein;Dbxref=GO:0032466,GO:0043565;gene=noc;Parent=GCA000144955_02739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_000742837.1,SO:0001217,UniParc:UPI0000054984,UniRef:UniRef100_Q2FUQ5,UniRef:UniRef50_A0A6N3FL57,UniRef:UniRef90_Q2FUQ5
contig_1	Pyrodigal	gene	2813144	2813863	.	-	.	ID=GCA000144955_02740_gene;locus_tag=GCA000144955_02740;gene=rsmG
contig_1	Pyrodigal	CDS	2813144	2813863	.	-	0	ID=GCA000144955_02740;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000144955_02740;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000144955_02740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03501,RefSeq:WP_000215588.1,SO:0001217,UniParc:UPI0001B3B443,UniRef:UniRef100_A0AAW9XHT7,UniRef:UniRef50_P25813,UniRef:UniRef90_Q6GD94;ec_number=2.1.1.170
contig_1	Pyrodigal	gene	2813863	2815740	.	-	.	ID=GCA000144955_02741_gene;locus_tag=GCA000144955_02741;gene=mnmG
contig_1	Pyrodigal	CDS	2813863	2815740	.	-	0	ID=GCA000144955_02741;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA000144955_02741;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA000144955_02741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0445,COG:J,KEGG:K03495,RefSeq:WP_000046620.1,SO:0001217,UniParc:UPI0001DD9BEA,UniRef:UniRef100_UPI0001DD9BEA,UniRef:UniRef50_Q2FUQ3,UniRef:UniRef90_Q2FUQ3
contig_1	Pyrodigal	gene	2815807	2817186	.	-	.	ID=GCA000144955_02742_gene;locus_tag=GCA000144955_02742;gene=mnmE
contig_1	Pyrodigal	CDS	2815807	2817186	.	-	0	ID=GCA000144955_02742;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA000144955_02742;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0002098,GO:0003924,GO:0005525,GO:0005829,GO:0006400,GO:0030488,GO:0046872;gene=mnmE;Parent=GCA000144955_02742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0486,COG:J,RefSeq:WP_000362509.1,SO:0001217,UniParc:UPI000013745C,UniRef:UniRef100_Q2FUQ2,UniRef:UniRef50_Q8DPZ8,UniRef:UniRef90_Q2FUQ2;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	2817329	2817676	.	-	.	ID=GCA000144955_02743_gene;locus_tag=GCA000144955_02743;gene=rnpA
contig_1	Pyrodigal	CDS	2817329	2817676	.	-	0	ID=GCA000144955_02743;Name=ribonuclease P protein component;locus_tag=GCA000144955_02743;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0001682,GO:0004526,GO:0008033,GO:0030677,GO:0042781;gene=rnpA;Parent=GCA000144955_02743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0594,COG:J,SO:0001217,UniParc:UPI0000134441,UniRef:UniRef100_Q5HCI2,UniRef:UniRef50_Q2FUQ1,UniRef:UniRef90_Q2FUQ1;ec_number=3.1.26.5
contig_1	Pyrodigal	gene	2817803	2817940	.	-	.	ID=GCA000144955_02744_gene;locus_tag=GCA000144955_02744;gene=rpmH
contig_1	Pyrodigal	CDS	2817803	2817940	.	-	0	ID=GCA000144955_02744;Name=50S ribosomal protein L34;locus_tag=GCA000144955_02744;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA000144955_02744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_000240855.1,SO:0001217,UniParc:UPI0000133FD1,UniRef:UniRef100_Q2FUQ0,UniRef:UniRef50_A5VMV2,UniRef:UniRef90_Q2FUQ0
##sequence-region contig_2 1 20730
contig_2	Bakta	region	1	20730	.	+	.	ID=contig_2;Name=contig_2;Is_circular=true
contig_2	Pyrodigal	gene	1	381	.	+	.	ID=GCA000144955_02745_gene;locus_tag=GCA000144955_02745
contig_2	Pyrodigal	CDS	1	381	.	+	0	ID=GCA000144955_02745;Name=Replication initiator protein;locus_tag=GCA000144955_02745;product=Replication initiator protein;pseudo=True;Parent=GCA000144955_02745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_D2JDV7,UniRef:UniRef90_D2JDV7
contig_2	Pyrodigal	gene	684	782	.	+	.	ID=GCA000144955_02746_gene;locus_tag=GCA000144955_02746
contig_2	Pyrodigal	CDS	684	782	.	+	0	ID=GCA000144955_02746;Name=Replication initiator protein;locus_tag=GCA000144955_02746;product=Replication initiator protein;Parent=GCA000144955_02746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002B238FB,UniRef:UniRef100_D2J7P8,UniRef:UniRef50_D2J7P8,UniRef:UniRef90_D2J7P8
contig_2	BLAST+	oriT	1132	1280	.	?	.	ID=BPGLLONNDN_2797;Name=origin of transfer;Note=origin of transfer
contig_2	Infernal	gene	1584	1807	.	-	.	ID=GCA000144955_02747_gene;locus_tag=GCA000144955_02747;gene=refA1
contig_2	Infernal	ncRNA	1584	1807	3e-31	-	.	ID=GCA000144955_02747;Name=Enterococcus sRNA A1;locus_tag=GCA000144955_02747;gene=refA1;product=Enterococcus sRNA A1;Dbxref=RFAM:RF02842;Parent=GCA000144955_02747_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02842
contig_2	Pyrodigal	gene	2286	2903	.	+	.	ID=GCA000144955_02748_gene;locus_tag=GCA000144955_02748;gene=cadD
contig_2	Pyrodigal	CDS	2286	2903	.	+	0	ID=GCA000144955_02748;Name=cadmium resistance transporter CadD;locus_tag=GCA000144955_02748;product=cadmium resistance transporter CadD;gene=cadD;Parent=GCA000144955_02748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_032489479,COG:COG4300,COG:P,NCBIProtein:BAB43874.1,RefSeq:WP_000616820.1,SO:0001217,UniParc:UPI00000DA060,UniRef:UniRef100_E4PYI3,UniRef:UniRef50_A0A345VN62,UniRef:UniRef90_Q938S1
contig_2	Pyrodigal	gene	2922	3269	.	+	.	ID=GCA000144955_02749_gene;locus_tag=GCA000144955_02749;gene=arsR
contig_2	Pyrodigal	CDS	2922	3269	.	+	0	ID=GCA000144955_02749;Name=Cadmium efflux system accessory protein;locus_tag=GCA000144955_02749;product=Cadmium efflux system accessory protein;gene=arsR;Parent=GCA000144955_02749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0640,COG:K,RefSeq:WP_000119691.1,SO:0001217,UniParc:UPI00000DA061,UniRef:UniRef100_Q2TF02,UniRef:UniRef50_D2J743,UniRef:UniRef90_D2J743
contig_2	Infernal	gene	3481	3581	.	-	.	ID=GCA000144955_02750_gene;locus_tag=GCA000144955_02750;gene=fstAT
contig_2	Infernal	ncRNA	3481	3581	1.1e-12	-	.	ID=GCA000144955_02750;Name=Fst antitoxin sRNA;locus_tag=GCA000144955_02750;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000144955_02750_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_2	Pyrodigal	gene	3742	4716	.	+	.	ID=GCA000144955_02751_gene;locus_tag=GCA000144955_02751
contig_2	Pyrodigal	CDS	3742	4716	.	+	0	ID=GCA000144955_02751;Name=DUF4062 domain-containing protein;locus_tag=GCA000144955_02751;product=DUF4062 domain-containing protein;Parent=GCA000144955_02751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000072391.1,SO:0001217,UniParc:UPI0001AE8357,UniRef:UniRef100_D2J7Y2,UniRef:UniRef50_D2J9E0,UniRef:UniRef90_D2J9E0
contig_2	Pyrodigal	gene	4836	5651	.	-	.	ID=GCA000144955_02752_gene;locus_tag=GCA000144955_02752
contig_2	Pyrodigal	CDS	4836	5651	.	-	0	ID=GCA000144955_02752;Name=putative ATP-binding protein;locus_tag=GCA000144955_02752;product=putative ATP-binding protein;Dbxref=GO:0005524,GO:0016887;Parent=GCA000144955_02752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2842,COG:X,RefSeq:WP_000164958.1,SO:0001217,UniParc:UPI00000DA063,UniRef:UniRef100_D2J7Y1,UniRef:UniRef50_P18179,UniRef:UniRef90_P18179
contig_2	Pyrodigal	gene	5644	6474	.	-	.	ID=GCA000144955_02753_gene;locus_tag=GCA000144955_02753
contig_2	Pyrodigal	CDS	5644	6474	.	-	0	ID=GCA000144955_02753;Name=Integrase core domain-containing protein;locus_tag=GCA000144955_02753;product=Integrase core domain-containing protein;Parent=GCA000144955_02753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_078071099.1,SO:0001217,UniParc:UPI0003170AFF,UniRef:UniRef100_UPI0003170AFF,UniRef:UniRef50_A0A499S482,UniRef:UniRef90_A0A499S482
contig_2	Pyrodigal	gene	6419	7087	.	-	.	ID=GCA000144955_02754_gene;locus_tag=GCA000144955_02754
contig_2	Pyrodigal	CDS	6419	7087	.	-	0	ID=GCA000144955_02754;Name=Transposase;locus_tag=GCA000144955_02754;product=Transposase;Parent=GCA000144955_02754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001566954.1,SO:0001217,UniParc:UPI00000DA065,UniRef:UniRef100_A0A499S3B2,UniRef:UniRef50_A0A499S3B2,UniRef:UniRef90_A0A499S3B2
contig_2	Pyrodigal	gene	7059	7652	.	-	.	ID=GCA000144955_02755_gene;locus_tag=GCA000144955_02755;gene=resR
contig_2	Pyrodigal	CDS	7059	7652	.	-	0	ID=GCA000144955_02755;Name=Transposon Tn552 DNA-invertase BinR;locus_tag=GCA000144955_02755;product=Transposon Tn552 DNA-invertase BinR;Dbxref=GO:0000150,GO:0003677,GO:0015074;gene=resR;Parent=GCA000144955_02755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K14060,RefSeq:WP_000690638.1,SO:0001217,UniParc:UPI00000D7864,UniRef:UniRef100_Q7WU27,UniRef:UniRef50_P19241,UniRef:UniRef90_P19241
contig_2	Pyrodigal	gene	7916	8296	.	-	.	ID=GCA000144955_02756_gene;locus_tag=GCA000144955_02756;gene=blaI
contig_2	Pyrodigal	CDS	7916	8296	.	-	0	ID=GCA000144955_02756;Name=penicillinase repressor BlaI;locus_tag=GCA000144955_02756;product=penicillinase repressor BlaI;Dbxref=GO:0003677,GO:0005737,GO:0045892,GO:0046677;gene=blaI;Parent=GCA000144955_02756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3682,COG:K,KEGG:K02171,NCBIProtein:WP_001284656.1,RefSeq:WP_001284653.1,SO:0001217,UniParc:UPI00000D7834,UniRef:UniRef100_Q5HS64,UniRef:UniRef50_P0A042,UniRef:UniRef90_P0A042
contig_2	Pyrodigal	gene	8286	10043	.	-	.	ID=GCA000144955_02757_gene;locus_tag=GCA000144955_02757;gene=blaR1
contig_2	Pyrodigal	CDS	8286	10043	.	-	0	ID=GCA000144955_02757;Name=beta-lactam sensor/signal transducer BlaR1;locus_tag=GCA000144955_02757;product=beta-lactam sensor/signal transducer BlaR1;Dbxref=GO:0005886,GO:0008658;gene=blaR1;Parent=GCA000144955_02757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4219,COG:T,NCBIProtein:WP_001096386.1,RefSeq:WP_001096385.1,SO:0001217,UniParc:UPI00000DA066,UniRef:UniRef100_E4PYK1,UniRef:UniRef50_P18357,UniRef:UniRef90_P18357
contig_2	Pyrodigal	gene	10150	10995	.	+	.	ID=GCA000144955_02758_gene;locus_tag=GCA000144955_02758;gene=blaZ
contig_2	Pyrodigal	CDS	10150	10995	.	+	0	ID=GCA000144955_02758;Name=penicillin-hydrolyzing class A beta-lactamase BlaZ;locus_tag=GCA000144955_02758;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;Dbxref=GO:0008800,GO:0030655,GO:0046677;gene=blaZ;Parent=GCA000144955_02758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2367,COG:V,NCBIProtein:WP_000733289.1,RefSeq:WP_000733289.1,SO:0001217,UniParc:UPI00000DA067,UniRef:UniRef100_Q2FC27,UniRef:UniRef50_P00807,UniRef:UniRef90_P00807;ec_number=3.5.2.6
contig_2	Pyrodigal	gene	11364	11972	.	+	.	ID=GCA000144955_02759_gene;locus_tag=GCA000144955_02759;gene=bin3
contig_2	Pyrodigal	CDS	11364	11972	.	+	0	ID=GCA000144955_02759;Name=Putative transposon Tn552 DNA-invertase bin3;locus_tag=GCA000144955_02759;product=Putative transposon Tn552 DNA-invertase bin3;Dbxref=GO:0000150,GO:0003677,GO:0015074,GO:0032196;gene=bin3;Parent=GCA000144955_02759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001566953.1,SO:0001217,UniParc:UPI0002C9D5CD,UniRef:UniRef100_D2J7Z9,UniRef:UniRef50_P20384,UniRef:UniRef90_P20384
contig_2	Pyrodigal	gene	12386	12679	.	+	.	ID=GCA000144955_02760_gene;locus_tag=GCA000144955_02760
contig_2	Pyrodigal	CDS	12386	12679	.	+	0	ID=GCA000144955_02760;Name=Lactococcin 972 family bacteriocin;locus_tag=GCA000144955_02760;product=Lactococcin 972 family bacteriocin;Parent=GCA000144955_02760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000726502.1,SO:0001217,UniParc:UPI00000C6ED2,UniRef:UniRef100_A0A917FB04,UniRef:UniRef50_A0A917FB04,UniRef:UniRef90_A0A917FB04
contig_2	Pyrodigal	gene	12754	14688	.	+	.	ID=GCA000144955_02761_gene;locus_tag=GCA000144955_02761
contig_2	Pyrodigal	CDS	12754	14688	.	+	0	ID=GCA000144955_02761;Name=Bacteriocin-associated integral membrane family protein;locus_tag=GCA000144955_02761;product=Bacteriocin-associated integral membrane family protein;Parent=GCA000144955_02761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4652,COG:S,RefSeq:WP_000713729.1,SO:0001217,UniParc:UPI00003B1B64,UniRef:UniRef100_D2J7Q9,UniRef:UniRef50_D2JDC8,UniRef:UniRef90_D2JDC8
contig_2	Pyrodigal	gene	14692	15003	.	+	.	ID=GCA000144955_02762_gene;locus_tag=GCA000144955_02762;gene=yxeA
contig_2	Pyrodigal	CDS	14692	15003	.	+	0	ID=GCA000144955_02762;Name=YxeA family protein;locus_tag=GCA000144955_02762;product=YxeA family protein;gene=yxeA;Parent=GCA000144955_02762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000831610.1,SO:0001217,UniParc:UPI00000D7822,UniRef:UniRef100_B0I1W0,UniRef:UniRef50_D2J8T3,UniRef:UniRef90_D2J8T3
contig_2	Pyrodigal	gene	15015	15641	.	+	.	ID=GCA000144955_02763_gene;locus_tag=GCA000144955_02763;gene=lolD
contig_2	Pyrodigal	CDS	15015	15641	.	+	0	ID=GCA000144955_02763;Name=ABC transporter ATP-binding protein;locus_tag=GCA000144955_02763;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000144955_02763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000593103.1,SO:0001217,UniParc:UPI00000D7787,UniRef:UniRef100_B0I1W1,UniRef:UniRef50_B0I1W1,UniRef:UniRef90_B0I1W1
contig_2	Pyrodigal	gene	15879	16184	.	+	.	ID=GCA000144955_02764_gene;locus_tag=GCA000144955_02764;gene=mobV
contig_2	Pyrodigal	CDS	15879	16184	.	+	0	ID=GCA000144955_02764;Name=MobV family relaxase;locus_tag=GCA000144955_02764;product=MobV family relaxase;Dbxref=GO:0003677,GO:0006310;gene=mobV;Parent=GCA000144955_02764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000122363.1,SO:0001217,UniParc:UPI00000DA06B,UniRef:UniRef100_D2J8P9,UniRef:UniRef50_A0A0G2T6B4,UniRef:UniRef90_D2J8P9
contig_2	Pyrodigal	gene	16209	16508	.	+	.	ID=GCA000144955_02765_gene;locus_tag=GCA000144955_02765
contig_2	Pyrodigal	CDS	16209	16508	.	+	0	ID=GCA000144955_02765;Name=Mobilization protein;locus_tag=GCA000144955_02765;product=Mobilization protein;Parent=GCA000144955_02765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000390798.1,SO:0001217,UniParc:UPI00000DA06C,UniRef:UniRef100_D2J7Q5,UniRef:UniRef50_D2J7Q5,UniRef:UniRef90_D2J7Q5
contig_2	Pyrodigal	gene	16602	17147	.	+	.	ID=GCA000144955_02766_gene;locus_tag=GCA000144955_02766
contig_2	Pyrodigal	CDS	16602	17147	.	+	0	ID=GCA000144955_02766;Name=Truncated Pre protein;locus_tag=GCA000144955_02766;product=Truncated Pre protein;Parent=GCA000144955_02766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000273005.1,SO:0001217,UniParc:UPI0001AB1811,UniRef:UniRef100_E4PYL2,UniRef:UniRef50_B1B3K0,UniRef:UniRef90_B1B3K0
contig_2	Pyrodigal	gene	17531	18391	.	+	.	ID=GCA000144955_02767_gene;locus_tag=GCA000144955_02767
contig_2	Pyrodigal	CDS	17531	18391	.	+	0	ID=GCA000144955_02767;Name=Initiator Replication family protein;locus_tag=GCA000144955_02767;product=Initiator Replication family protein;Parent=GCA000144955_02767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5527,COG:X,RefSeq:WP_000145511.1,SO:0001217,UniParc:UPI00000D76A2,UniRef:UniRef100_B1B3J8,UniRef:UniRef50_B1B3J8,UniRef:UniRef90_B1B3J8
contig_2	Pyrodigal	gene	18478	18819	.	+	.	ID=GCA000144955_02768_gene;locus_tag=GCA000144955_02768;gene=xRE
contig_2	Pyrodigal	CDS	18478	18819	.	+	0	ID=GCA000144955_02768;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000144955_02768;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000144955_02768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_000761341.1,SO:0001217,UniParc:UPI00000DA06F,UniRef:UniRef100_D2J7Q2,UniRef:UniRef50_D2J8Q2,UniRef:UniRef90_D2J8Q2
contig_2	Bakta	gene	19058	19129	.	-	.	ID=GCA000144955_02769_gene;locus_tag=GCA000144955_02769;inference=ab initio prediction:Bakta;gene=dnaI
contig_2	Bakta	CDS	19058	19129	.	-	0	ID=GCA000144955_02769;Name=primosomal protein DnaI;locus_tag=GCA000144955_02769;product=primosomal protein DnaI;gene=dnaI;Parent=GCA000144955_02769_gene;Note=RefSeq:WP_106873653.1,SO:0001217,UniParc:UPI00078D8DF6,UniRef:UniRef100_A0A6L5Z6L4,UniRef:UniRef50_Q2FXP5,UniRef:UniRef90_A0A6L5Z6L4
contig_2	Pyrodigal	gene	19278	19463	.	+	.	ID=GCA000144955_02770_gene;locus_tag=GCA000144955_02770
contig_2	Pyrodigal	CDS	19278	19463	.	+	0	ID=GCA000144955_02770;Name=Phage protein;locus_tag=GCA000144955_02770;product=Phage protein;Parent=GCA000144955_02770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000466619.1,SO:0001217,UniParc:UPI00000BF3F5,UniRef:UniRef100_E4PYH8,UniRef:UniRef50_E4PYH8,UniRef:UniRef90_E4PYH8
contig_2	Pyrodigal	gene	19682	20425	.	-	.	ID=GCA000144955_02771_gene;locus_tag=GCA000144955_02771
contig_2	Pyrodigal	CDS	19682	20425	.	-	0	ID=GCA000144955_02771;Name=Regulator of chromosome segregation-like C-terminal domain-containing protein;locus_tag=GCA000144955_02771;product=Regulator of chromosome segregation-like C-terminal domain-containing protein;Parent=GCA000144955_02771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000843758.1,SO:0001217,UniParc:UPI0001AE835A,UniRef:UniRef100_D2J7Y8,UniRef:UniRef50_D2J7Y8,UniRef:UniRef90_D2J7Y8