##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Mycobacterium tuberculosis Haarlem
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 4408224
contig_1	Bakta	region	1	4408224	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
contig_1	Pyrodigal	gene	102	1625	.	+	.	ID=GCA000153685_00001_gene;locus_tag=GCA000153685_00001;gene=dnaA
contig_1	Pyrodigal	CDS	102	1625	.	+	0	ID=GCA000153685_00001;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000153685_00001;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887,GO:0043565;gene=dnaA;Parent=GCA000153685_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02313,RefSeq:WP_003400253.1,SO:0001217,UniParc:UPI0000129532,UniRef:UniRef100_P9WNW3,UniRef:UniRef50_P9WNW3,UniRef:UniRef90_P9WNW3;ec_number=3.6.4.-
contig_1	BLAST+	rep_origin	1626	2152	.	?	.	ID=FNJOPAJJMO_4149;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	2153	3361	.	+	.	ID=GCA000153685_00002_gene;locus_tag=GCA000153685_00002;gene=dnaN
contig_1	Pyrodigal	CDS	2153	3361	.	+	0	ID=GCA000153685_00002;Name=DNA polymerase III subunit beta;locus_tag=GCA000153685_00002;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005576,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009274,GO:0009360,GO:0042802,GO:0046677;gene=dnaN;Parent=GCA000153685_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02338,RefSeq:WP_003400271.1,SO:0001217,UniParc:UPI0000129704,UniRef:UniRef100_P9WNU1,UniRef:UniRef50_P9WNU1,UniRef:UniRef90_P9WNU1;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3381	4538	.	+	.	ID=GCA000153685_00003_gene;locus_tag=GCA000153685_00003;gene=recF
contig_1	Pyrodigal	CDS	3381	4538	.	+	0	ID=GCA000153685_00003;Name=DNA replication/repair protein RecF;locus_tag=GCA000153685_00003;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000153685_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899768.1,SO:0001217,UniParc:UPI0000164F19,UniRef:UniRef100_P9WHI8,UniRef:UniRef50_P9WHI9,UniRef:UniRef90_P9WHI9
contig_1	Pyrodigal	gene	4583	5098	.	+	.	ID=GCA000153685_00004_gene;locus_tag=GCA000153685_00004;gene=dciA
contig_1	Pyrodigal	CDS	4583	5098	.	+	0	ID=GCA000153685_00004;Name=DNA replication protein DciA;locus_tag=GCA000153685_00004;product=DNA replication protein DciA;gene=dciA;Parent=GCA000153685_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899769,BlastRules:WP_011726604,SO:0001217,UniParc:UPI0001E61F48,UniRef:UniRef100_Q7U313,UniRef:UniRef50_Q9L7L4,UniRef:UniRef90_P9WFL1
contig_1	Pyrodigal	gene	5224	7368	.	+	.	ID=GCA000153685_00005_gene;locus_tag=GCA000153685_00005;gene=gyrB
contig_1	Pyrodigal	CDS	5224	7368	.	+	0	ID=GCA000153685_00005;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000153685_00005;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0000287,GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0005886,GO:0006261,GO:0006265,GO:0009274,GO:0034335,GO:0046677;gene=gyrB;Parent=GCA000153685_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02470,SO:0001217,UniParc:UPI0000165204,UniRef:UniRef100_H9MZS7,UniRef:UniRef50_P9WG45,UniRef:UniRef90_P9WG45;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	7403	9919	.	+	.	ID=GCA000153685_00006_gene;locus_tag=GCA000153685_00006;gene=gyrA
contig_1	Pyrodigal	CDS	7403	9919	.	+	0	ID=GCA000153685_00006;Name=intein-containing DNA gyrase subunit A;locus_tag=GCA000153685_00006;product=intein-containing DNA gyrase subunit A;Dbxref=GO:0000287,GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0005886,GO:0006261,GO:0006265,GO:0009274,GO:0009330,GO:0016887,GO:0034335,GO:0046677;gene=gyrA;Parent=GCA000153685_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02469,RefSeq:WP_003400286.1,SO:0001217,UniParc:UPI0000164F1A,UniRef:UniRef100_A0A0G2Q9F8,UniRef:UniRef50_P9WG47,UniRef:UniRef90_P9WG47;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	10064	10261	.	+	.	ID=GCA000153685_00007_gene;locus_tag=GCA000153685_00007
contig_1	Pyrodigal	CDS	10064	10261	.	+	0	ID=GCA000153685_00007;Name=hypothetical protein;locus_tag=GCA000153685_00007;product=hypothetical protein;Parent=GCA000153685_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE33B,UniRef:UniRef100_A0A0H3L4K8,UniRef:UniRef50_A0A0H3L4K8,UniRef:UniRef90_A0A0H3L4K8
contig_1	Pyrodigal	gene	10624	10929	.	+	.	ID=GCA000153685_00008_gene;locus_tag=GCA000153685_00008
contig_1	Pyrodigal	CDS	10624	10929	.	+	0	ID=GCA000153685_00008;Name=putative conserved membrane protein;locus_tag=GCA000153685_00008;product=putative conserved membrane protein;Parent=GCA000153685_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00041FC5F8,UniRef:UniRef100_A0A5P3LRM3,UniRef:UniRef50_A0A5P3LRM3,UniRef:UniRef90_A0A5P3LRM3
contig_1	tRNAscan-SE	gene	10988	11061	.	+	.	ID=GCA000153685_00009_gene;locus_tag=GCA000153685_00009;gene=trnI
contig_1	tRNAscan-SE	tRNA	10988	11061	.	+	.	ID=GCA000153685_00009;Name=tRNA-Ile(gat);locus_tag=GCA000153685_00009;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000153685_00009_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	11213	11285	.	+	.	ID=GCA000153685_00010_gene;locus_tag=GCA000153685_00010;gene=trnA
contig_1	tRNAscan-SE	tRNA	11213	11285	.	+	.	ID=GCA000153685_00010;Name=tRNA-Ala(tgc);locus_tag=GCA000153685_00010;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000153685_00010_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Pyrodigal	gene	11522	11629	.	-	.	ID=GCA000153685_00011_gene;locus_tag=GCA000153685_00011
contig_1	Pyrodigal	CDS	11522	11629	.	-	0	ID=GCA000153685_00011;Name=DUF3800 domain-containing protein;locus_tag=GCA000153685_00011;product=DUF3800 domain-containing protein;Parent=GCA000153685_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A49C,UniRef:UniRef100_A0A0E8NPY8,UniRef:UniRef50_R4LXW3,UniRef:UniRef90_A0A0E8NPY8
contig_1	Pyrodigal	gene	11656	11793	.	-	.	ID=GCA000153685_00012_gene;locus_tag=GCA000153685_00012
contig_1	Pyrodigal	CDS	11656	11793	.	-	0	ID=GCA000153685_00012;Name=DUF3800 domain-containing protein;locus_tag=GCA000153685_00012;product=DUF3800 domain-containing protein;Parent=GCA000153685_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400297.1,SO:0001217,UniParc:UPI00000D2B1C,UniRef:UniRef100_A0A0H3L4B5,UniRef:UniRef50_R4M1G8,UniRef:UniRef90_R4M1G8
contig_1	Pyrodigal	gene	11975	12412	.	-	.	ID=GCA000153685_00013_gene;locus_tag=GCA000153685_00013;gene=cwsA
contig_1	Pyrodigal	CDS	11975	12412	.	-	0	ID=GCA000153685_00013;Name=Cell wall synthesis protein CwsA;locus_tag=GCA000153685_00013;product=Cell wall synthesis protein CwsA;Dbxref=GO:0005886,GO:0008360,GO:0042546,GO:0051301;gene=cwsA;Parent=GCA000153685_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900784.1,SO:0001217,UniParc:UPI000127807B,UniRef:UniRef100_UPI000127807B,UniRef:UniRef50_P9WJF3,UniRef:UniRef90_P9WJF3
contig_1	Pyrodigal	gene	12569	13117	.	+	.	ID=GCA000153685_00014_gene;locus_tag=GCA000153685_00014;gene=ppiA
contig_1	Pyrodigal	CDS	12569	13117	.	+	0	ID=GCA000153685_00014;Name=peptidylprolyl isomerase PpiA;locus_tag=GCA000153685_00014;product=peptidylprolyl isomerase PpiA;Dbxref=GO:0003755,GO:0005576,GO:0005829,GO:0005886,GO:0006457,GO:0009274,GO:0010039,GO:0140839,GO:0140840;gene=ppiA;Parent=GCA000153685_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400321,RefSeq:WP_003400321.1,SO:0001217,UniParc:UPI000013206D,UniRef:UniRef100_P9WHW3,UniRef:UniRef50_P9WHW3,UniRef:UniRef90_P9WHW3;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	13125	13277	.	-	.	ID=GCA000153685_00015_gene;locus_tag=GCA000153685_00015
contig_1	Pyrodigal	CDS	13125	13277	.	-	0	ID=GCA000153685_00015;Name=hypothetical protein;locus_tag=GCA000153685_00015;product=hypothetical protein;Parent=GCA000153685_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907166.1,SO:0001217,UniParc:UPI00000D2B1D,UniRef:UniRef100_A0A0H3L4L4,UniRef:UniRef50_A0A0H3L4L4,UniRef:UniRef90_A0A0H3L4L4
contig_1	Pyrodigal	gene	13234	13593	.	-	.	ID=GCA000153685_00016_gene;locus_tag=GCA000153685_00016
contig_1	Pyrodigal	CDS	13234	13593	.	-	0	ID=GCA000153685_00016;Name=putative protein Rv0010c;locus_tag=GCA000153685_00016;product=putative protein Rv0010c;Dbxref=GO:0005886;Parent=GCA000153685_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D8DB87,UniRef:UniRef100_P9WMA3,UniRef:UniRef50_P9WMA3,UniRef:UniRef90_P9WMA3
contig_1	Pyrodigal	gene	13815	14096	.	-	.	ID=GCA000153685_00017_gene;locus_tag=GCA000153685_00017;gene=crgA
contig_1	Pyrodigal	CDS	13815	14096	.	-	0	ID=GCA000153685_00017;Name=cell division protein CrgA;locus_tag=GCA000153685_00017;product=cell division protein CrgA;Dbxref=GO:0005886,GO:0051301;gene=crgA;Parent=GCA000153685_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400344.1,SO:0001217,UniParc:UPI00001390E6,UniRef:UniRef100_P9WP57,UniRef:UniRef50_P9WP57,UniRef:UniRef90_P9WP57
contig_1	Pyrodigal	gene	14235	14978	.	+	.	ID=GCA000153685_00018_gene;locus_tag=GCA000153685_00018
contig_1	Pyrodigal	CDS	14235	14978	.	+	0	ID=GCA000153685_00018;Name=DUF881 domain-containing protein;locus_tag=GCA000153685_00018;product=DUF881 domain-containing protein;Parent=GCA000153685_00018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917864.1,SO:0001217,UniParc:UPI000169A49E,UniRef:UniRef100_A5TY82,UniRef:UniRef50_G7CIQ6,UniRef:UniRef90_A0A829C8C8
contig_1	Pyrodigal	gene	15015	15713	.	+	.	ID=GCA000153685_00019_gene;locus_tag=GCA000153685_00019;gene=trpG
contig_1	Pyrodigal	CDS	15015	15713	.	+	0	ID=GCA000153685_00019;Name=aminodeoxychorismate/anthranilate synthase component II;locus_tag=GCA000153685_00019;product=aminodeoxychorismate/anthranilate synthase component II;Dbxref=GO:0000162,GO:0004049,GO:0005886;gene=trpG;Parent=GCA000153685_00019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899773.1,SO:0001217,UniParc:UPI00000D122C,UniRef:UniRef100_P9WN35,UniRef:UniRef50_P9WN35,UniRef:UniRef90_P9WN35;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	15691	17571	.	-	.	ID=GCA000153685_00020_gene;locus_tag=GCA000153685_00020;gene=pknB
contig_1	Pyrodigal	CDS	15691	17571	.	-	0	ID=GCA000153685_00020;Name=serine/threonine protein kinase PknB;locus_tag=GCA000153685_00020;product=serine/threonine protein kinase PknB;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006355,GO:0006468,GO:0008360,GO:0009252,GO:0009274,GO:0010698,GO:0030145,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042802,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045717,GO:0045967,GO:0052572,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknB;Parent=GCA000153685_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400356,RefSeq:WP_003400356.1,SO:0001217,UniParc:UPI0000131B78,UniRef:UniRef100_P9WI81,UniRef:UniRef50_P9WI81,UniRef:UniRef90_P9WI81;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	17568	18863	.	-	.	ID=GCA000153685_00021_gene;locus_tag=GCA000153685_00021;gene=pknA
contig_1	Pyrodigal	CDS	17568	18863	.	-	0	ID=GCA000153685_00021;Name=serine/threonine protein kinase PknA;locus_tag=GCA000153685_00021;product=serine/threonine protein kinase PknA;Dbxref=GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006355,GO:0008360,GO:0019217,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045717,GO:0051055,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244,GO:1990443;gene=pknA;Parent=GCA000153685_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400358,RefSeq:WP_003400358.1,SO:0001217,UniParc:UPI0000131B76,UniRef:UniRef100_P9WI83,UniRef:UniRef50_P9WI83,UniRef:UniRef90_P9WI83;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	18860	20335	.	-	.	ID=GCA000153685_00022_gene;locus_tag=GCA000153685_00022;gene=pbpA
contig_1	Pyrodigal	CDS	18860	20335	.	-	0	ID=GCA000153685_00022;Name=D%2CD-transpeptidase PbpA;locus_tag=GCA000153685_00022;product=D%2CD-transpeptidase PbpA;Dbxref=GO:0005829,GO:0005886,GO:0008360,GO:0008658,GO:0009002,GO:0009252,GO:0071555,GO:0071972;gene=pbpA;Parent=GCA000153685_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899775,COG:COG0768,COG:DM,RefSeq:WP_003899775.1,SO:0001217,UniParc:UPI00000D1222,UniRef:UniRef100_P9WKD1,UniRef:UniRef50_P9WKD1,UniRef:UniRef90_P9WKD1;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	20332	21741	.	-	.	ID=GCA000153685_00023_gene;locus_tag=GCA000153685_00023;gene=rodA
contig_1	Pyrodigal	CDS	20332	21741	.	-	0	ID=GCA000153685_00023;Name=cell shape-determining peptidoglycan glycosyltransferase RodA;locus_tag=GCA000153685_00023;product=cell shape-determining peptidoglycan glycosyltransferase RodA;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0015648,GO:0016757,GO:0032153,GO:0051301,GO:0052167,GO:0071555;gene=rodA;Parent=GCA000153685_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003227413,BlastRules:WP_003400364,RefSeq:WP_003400364.1,SO:0001217,UniParc:UPI000012ACFC,UniRef:UniRef100_P9WN99,UniRef:UniRef50_P9WN99,UniRef:UniRef90_P9WN99;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	21738	23273	.	-	.	ID=GCA000153685_00024_gene;locus_tag=GCA000153685_00024;gene=pstP
contig_1	Pyrodigal	CDS	21738	23273	.	-	0	ID=GCA000153685_00024;Name=serine/threonine phosphatase PstP;locus_tag=GCA000153685_00024;product=serine/threonine phosphatase PstP;Dbxref=GO:0000287,GO:0004721,GO:0004722,GO:0005886,GO:0006355,GO:0007165,GO:0009274,GO:0016020,GO:0017018,GO:0030145,GO:0033192,GO:0140791,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990439;gene=pstP;Parent=GCA000153685_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_015385224,RefSeq:WP_031728792.1,SO:0001217,UniParc:UPI0004BA22F5,UniRef:UniRef100_UPI0004BA22F5,UniRef:UniRef50_P9WHW5,UniRef:UniRef90_P9WHW5;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	23371	23838	.	-	.	ID=GCA000153685_00025_gene;locus_tag=GCA000153685_00025;gene=fhaB
contig_1	Pyrodigal	CDS	23371	23838	.	-	0	ID=GCA000153685_00025;Name=growth/cell division-associated protein FhaB;locus_tag=GCA000153685_00025;product=growth/cell division-associated protein FhaB;Dbxref=GO:0003729,GO:0005576,GO:0005886,GO:0006979,GO:0051301,GO:0051701;gene=fhaB;Parent=GCA000153685_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400373,COG:COG1716,COG:T,RefSeq:WP_003400373.1,SO:0001217,UniParc:UPI00000D1214,UniRef:UniRef100_P9WJB5,UniRef:UniRef50_P9WJB5,UniRef:UniRef90_P9WJB5
contig_1	Pyrodigal	gene	23962	25527	.	-	.	ID=GCA000153685_00026_gene;locus_tag=GCA000153685_00026;gene=fhaA
contig_1	Pyrodigal	CDS	23962	25527	.	-	0	ID=GCA000153685_00026;Name=cell division-associated protein FhaA;locus_tag=GCA000153685_00026;product=cell division-associated protein FhaA;gene=fhaA;Parent=GCA000153685_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912368,RefSeq:WP_003899777.1,SO:0001217,UniParc:UPI00000D2B1F,UniRef:UniRef100_A0A0H3LB36,UniRef:UniRef50_P71590,UniRef:UniRef90_A0A0H3LB36
contig_1	tRNAscan-SE	gene	25727	25809	.	+	.	ID=GCA000153685_00027_gene;locus_tag=GCA000153685_00027;gene=trnL
contig_1	tRNAscan-SE	tRNA	25727	25809	.	+	.	ID=GCA000153685_00027;Name=tRNA-Leu(cag);locus_tag=GCA000153685_00027;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA000153685_00027_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	25996	26964	.	-	.	ID=GCA000153685_00028_gene;locus_tag=GCA000153685_00028
contig_1	Pyrodigal	CDS	25996	26964	.	-	0	ID=GCA000153685_00028;Name=Nitronate monooxygenase domain-containing protein;locus_tag=GCA000153685_00028;product=Nitronate monooxygenase domain-containing protein;Parent=GCA000153685_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899778.1,SO:0001217,UniParc:UPI00000D1243,UniRef:UniRef100_P71591,UniRef:UniRef50_P71591,UniRef:UniRef90_P71591
contig_1	Pyrodigal	gene	27106	27525	.	-	.	ID=GCA000153685_00029_gene;locus_tag=GCA000153685_00029;gene=whiB5
contig_1	Pyrodigal	CDS	27106	27525	.	-	0	ID=GCA000153685_00029;Name=transcriptional regulator WhiB5;locus_tag=GCA000153685_00029;product=transcriptional regulator WhiB5;Dbxref=GO:0003677,GO:0005737,GO:0006355,GO:0035731,GO:0046872,GO:0051539;gene=whiB5;Parent=GCA000153685_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400388,KEGG:K18956,RefSeq:WP_003400388.1,SO:0001217,UniParc:UPI00000CA921,UniRef:UniRef100_P71592,UniRef:UniRef50_P71592,UniRef:UniRef90_P71592
contig_1	Pyrodigal	gene	27678	28448	.	+	.	ID=GCA000153685_00030_gene;locus_tag=GCA000153685_00030
contig_1	Pyrodigal	CDS	27678	28448	.	+	0	ID=GCA000153685_00030;Name=putative HTH-type transcriptional regulator Rv0023;locus_tag=GCA000153685_00030;product=putative HTH-type transcriptional regulator Rv0023;Dbxref=GO:0003677;Parent=GCA000153685_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400391.1,SO:0001217,UniParc:UPI000013911A,UniRef:UniRef100_P9WMI3,UniRef:UniRef50_P9WMI3,UniRef:UniRef90_P9WMI3
contig_1	Pyrodigal	gene	28445	29290	.	+	.	ID=GCA000153685_00031_gene;locus_tag=GCA000153685_00031
contig_1	Pyrodigal	CDS	28445	29290	.	+	0	ID=GCA000153685_00031;Name=NlpC/P60 domain-containing protein;locus_tag=GCA000153685_00031;product=NlpC/P60 domain-containing protein;Parent=GCA000153685_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400393.1,SO:0001217,UniParc:UPI00000D121B,UniRef:UniRef100_P71594,UniRef:UniRef50_R4LXY6,UniRef:UniRef90_R4LXY6
contig_1	Pyrodigal	gene	29328	29600	.	+	.	ID=GCA000153685_00032_gene;locus_tag=GCA000153685_00032
contig_1	Pyrodigal	CDS	29328	29600	.	+	0	ID=GCA000153685_00032;Name=hypothetical protein;locus_tag=GCA000153685_00032;product=hypothetical protein;Parent=GCA000153685_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000164F1D,UniRef:UniRef100_A0A0H3L4D4,UniRef:UniRef50_A0A0H3L4D4,UniRef:UniRef90_A0A0H3L4D4,PFAM:PF10774.15
contig_1	Pyrodigal	gene	29804	31150	.	+	.	ID=GCA000153685_00033_gene;locus_tag=GCA000153685_00033
contig_1	Pyrodigal	CDS	29804	31150	.	+	0	ID=GCA000153685_00033;Name=putative protein Rv0026;locus_tag=GCA000153685_00033;product=putative protein Rv0026;Parent=GCA000153685_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012780B0,UniRef:UniRef100_A0A0H3L489,UniRef:UniRef50_P9WMB1,UniRef:UniRef90_P9WMB1
contig_1	Pyrodigal	gene	31271	31588	.	+	.	ID=GCA000153685_00034_gene;locus_tag=GCA000153685_00034
contig_1	Pyrodigal	CDS	31271	31588	.	+	0	ID=GCA000153685_00034;Name=putative protein Rv0027;locus_tag=GCA000153685_00034;product=putative protein Rv0027;Dbxref=GO:0009306;Parent=GCA000153685_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400401.1,SO:0001217,UniParc:UPI000013912B,UniRef:UniRef100_P9WM99,UniRef:UniRef50_P9WM99,UniRef:UniRef90_P9WM99
contig_1	Pyrodigal	gene	31596	31901	.	+	.	ID=GCA000153685_00035_gene;locus_tag=GCA000153685_00035
contig_1	Pyrodigal	CDS	31596	31901	.	+	0	ID=GCA000153685_00035;Name=putative protein Mb0029;locus_tag=GCA000153685_00035;product=putative protein Mb0029;Parent=GCA000153685_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400405.1,SO:0001217,UniParc:UPI0000139130,UniRef:UniRef100_P9WM97,UniRef:UniRef50_P9WM97,UniRef:UniRef90_P9WM97
contig_1	Pyrodigal	gene	31906	32049	.	-	.	ID=GCA000153685_00036_gene;locus_tag=GCA000153685_00036
contig_1	Pyrodigal	CDS	31906	32049	.	-	0	ID=GCA000153685_00036;Name=putative protein Rv0028A;locus_tag=GCA000153685_00036;product=putative protein Rv0028A;Parent=GCA000153685_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400408.1,SO:0001217,UniParc:UPI00000D2B21,UniRef:UniRef100_P0DMM2,UniRef:UniRef50_P0DMM2,UniRef:UniRef90_P0DMM2
contig_1	Pyrodigal	gene	32361	33236	.	+	.	ID=GCA000153685_00037_gene;locus_tag=GCA000153685_00037
contig_1	Pyrodigal	CDS	32361	33236	.	+	0	ID=GCA000153685_00037;Name=Transmembrane protein;locus_tag=GCA000153685_00037;product=Transmembrane protein;Parent=GCA000153685_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62800,UniRef:UniRef100_P71599,UniRef:UniRef50_P71599,UniRef:UniRef90_P71599
contig_1	Pyrodigal	gene	33306	33635	.	+	.	ID=GCA000153685_00038_gene;locus_tag=GCA000153685_00038
contig_1	Pyrodigal	CDS	33306	33635	.	+	0	ID=GCA000153685_00038;Name=putative protein Rv0030;locus_tag=GCA000153685_00038;product=putative protein Rv0030;Parent=GCA000153685_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400413.1,SO:0001217,UniParc:UPI0000139138,UniRef:UniRef100_P9WM95,UniRef:UniRef50_P9WM95,UniRef:UniRef90_P9WM95
contig_1	Pyrodigal	gene	34377	36602	.	+	.	ID=GCA000153685_00039_gene;locus_tag=GCA000153685_00039;gene=bioF2
contig_1	Pyrodigal	CDS	34377	36602	.	+	0	ID=GCA000153685_00039;Name=Putative 8-amino-7-oxononanoate synthase 2;locus_tag=GCA000153685_00039;product=Putative 8-amino-7-oxononanoate synthase 2;Dbxref=GO:0008710,GO:0009058,GO:0009274,GO:0030170;gene=bioF2;Parent=GCA000153685_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012780B1,UniRef:UniRef100_A0A0E8TUP6,UniRef:UniRef50_P9WQ85,UniRef:UniRef90_P9WQ85;ec_number=2.3.1.47
contig_1	Pyrodigal	gene	36688	36951	.	+	.	ID=GCA000153685_00040_gene;locus_tag=GCA000153685_00040;gene=acpA
contig_1	Pyrodigal	CDS	36688	36951	.	+	0	ID=GCA000153685_00040;Name=Acyl carrier protein AcpA;locus_tag=GCA000153685_00040;product=Acyl carrier protein AcpA;gene=acpA;Parent=GCA000153685_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400418.1,SO:0001217,UniParc:UPI00000D1219,UniRef:UniRef100_A5TYA4,UniRef:UniRef50_A5TYA4,UniRef:UniRef90_A5TYA4
contig_1	Pyrodigal	gene	36948	37343	.	+	.	ID=GCA000153685_00041_gene;locus_tag=GCA000153685_00041
contig_1	Pyrodigal	CDS	36948	37343	.	+	0	ID=GCA000153685_00041;Name=putative protein Mb0035;locus_tag=GCA000153685_00041;product=putative protein Mb0035;Parent=GCA000153685_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400421.1,SO:0001217,UniParc:UPI0000139145,UniRef:UniRef100_P9WM93,UniRef:UniRef50_P9WM93,UniRef:UniRef90_P9WM93
contig_1	Pyrodigal	gene	37340	39028	.	+	.	ID=GCA000153685_00042_gene;locus_tag=GCA000153685_00042
contig_1	Pyrodigal	CDS	37340	39028	.	+	0	ID=GCA000153685_00042;Name=Fatty-acid-CoA ligase;locus_tag=GCA000153685_00042;product=Fatty-acid-CoA ligase;Parent=GCA000153685_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400425.1,SO:0001217,UniParc:UPI00000D1206,UniRef:UniRef100_A5TYA6,UniRef:UniRef50_A0A5R1Z6E4,UniRef:UniRef90_A0A5R1Z6E4
contig_1	Pyrodigal	gene	39137	39910	.	-	.	ID=GCA000153685_00043_gene;locus_tag=GCA000153685_00043
contig_1	Pyrodigal	CDS	39137	39910	.	-	0	ID=GCA000153685_00043;Name=putative protein Mb0037c;locus_tag=GCA000153685_00043;product=putative protein Mb0037c;Dbxref=GO:0046872;Parent=GCA000153685_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400427.1,SO:0001217,UniParc:UPI0000139155,UniRef:UniRef100_P9WM91,UniRef:UniRef50_P9WM91,UniRef:UniRef90_P9WM91
contig_1	Pyrodigal	gene	39958	41268	.	-	.	ID=GCA000153685_00044_gene;locus_tag=GCA000153685_00044
contig_1	Pyrodigal	CDS	39958	41268	.	-	0	ID=GCA000153685_00044;Name=putative MFS-type transporter Mb0038c;locus_tag=GCA000153685_00044;product=putative MFS-type transporter Mb0038c;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A3F21E,UniRef:UniRef100_A0A0E9AN17,UniRef:UniRef50_P9WJY0,UniRef:UniRef90_P9WJY0
contig_1	Pyrodigal	gene	41361	41993	.	+	.	ID=GCA000153685_00045_gene;locus_tag=GCA000153685_00045
contig_1	Pyrodigal	CDS	41361	41993	.	+	0	ID=GCA000153685_00045;Name=YqgE/AlgH family protein;locus_tag=GCA000153685_00045;product=YqgE/AlgH family protein;Parent=GCA000153685_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003586257,UniRef:UniRef100_A0A0E8V8D8,UniRef:UniRef50_A1TI09,UniRef:UniRef90_A0A1X0DG97
contig_1	Pyrodigal	gene	42085	42432	.	-	.	ID=GCA000153685_00046_gene;locus_tag=GCA000153685_00046
contig_1	Pyrodigal	CDS	42085	42432	.	-	0	ID=GCA000153685_00046;Name=putative protein Rv0039c;locus_tag=GCA000153685_00046;product=putative protein Rv0039c;Dbxref=GO:0005886;Parent=GCA000153685_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907179.1,SO:0001217,UniParc:UPI0000139166,UniRef:UniRef100_P9WM89,UniRef:UniRef50_P9WM89,UniRef:UniRef90_P9WM89
contig_1	Pyrodigal	gene	42514	43446	.	-	.	ID=GCA000153685_00047_gene;locus_tag=GCA000153685_00047;gene=mtc28
contig_1	Pyrodigal	CDS	42514	43446	.	-	0	ID=GCA000153685_00047;Name=Proline-rich antigen;locus_tag=GCA000153685_00047;product=Proline-rich antigen;Dbxref=GO:0005576;gene=mtc28;Parent=GCA000153685_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900793.1,SO:0001217,UniParc:UPI0000132151,UniRef:UniRef100_P9WIM9,UniRef:UniRef50_P9WIM9,UniRef:UniRef90_P9WIM9
contig_1	Pyrodigal	gene	43676	46552	.	+	.	ID=GCA000153685_00048_gene;locus_tag=GCA000153685_00048;gene=leuS
contig_1	Pyrodigal	CDS	43676	46552	.	+	0	ID=GCA000153685_00048;Name=leucine--tRNA ligase;locus_tag=GCA000153685_00048;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000153685_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01869,SO:0001217,UniParc:UPI00005EE34A,UniRef:UniRef100_A0A0E8B8U0,UniRef:UniRef50_P9WFV1,UniRef:UniRef90_P9WFV1;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	46662	47288	.	-	.	ID=GCA000153685_00049_gene;locus_tag=GCA000153685_00049
contig_1	Pyrodigal	CDS	46662	47288	.	-	0	ID=GCA000153685_00049;Name=putative transcriptional regulatory protein (Probably MarR-family);locus_tag=GCA000153685_00049;product=putative transcriptional regulatory protein (Probably MarR-family);Parent=GCA000153685_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400476.1,SO:0001217,UniParc:UPI00000D11F5,UniRef:UniRef100_P71699,UniRef:UniRef50_P71699,UniRef:UniRef90_P71699
contig_1	Pyrodigal	gene	47447	48181	.	-	.	ID=GCA000153685_00050_gene;locus_tag=GCA000153685_00050
contig_1	Pyrodigal	CDS	47447	48181	.	-	0	ID=GCA000153685_00050;Name=putative HTH-type transcriptional regulator Mb0044c;locus_tag=GCA000153685_00050;product=putative HTH-type transcriptional regulator Mb0044c;Dbxref=GO:0003677,GO:0003700;Parent=GCA000153685_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899786.1,SO:0001217,UniParc:UPI0000139179,UniRef:UniRef100_P9WMG9,UniRef:UniRef50_P9WMG9,UniRef:UniRef90_P9WMG9
contig_1	Pyrodigal	gene	48314	49108	.	-	.	ID=GCA000153685_00051_gene;locus_tag=GCA000153685_00051
contig_1	Pyrodigal	CDS	48314	49108	.	-	0	ID=GCA000153685_00051;Name=putative oxidoreductase;locus_tag=GCA000153685_00051;product=putative oxidoreductase;Parent=GCA000153685_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400486.1,SO:0001217,UniParc:UPI00000D123F,UniRef:UniRef100_P71701,UniRef:UniRef50_A0A6N7CJE0,UniRef:UniRef90_P71701
contig_1	Pyrodigal	gene	49124	50020	.	-	.	ID=GCA000153685_00052_gene;locus_tag=GCA000153685_00052
contig_1	Pyrodigal	CDS	49124	50020	.	-	0	ID=GCA000153685_00052;Name=Esterase Rv0045c;locus_tag=GCA000153685_00052;product=Esterase Rv0045c;Dbxref=GO:0016787,GO:0106435;Parent=GCA000153685_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400489.1,SO:0001217,UniParc:UPI00000D121D,UniRef:UniRef100_I6XU97,UniRef:UniRef50_I6XU97,UniRef:UniRef90_I6XU97;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	50102	51205	.	-	.	ID=GCA000153685_00053_gene;locus_tag=GCA000153685_00053;gene=ino1
contig_1	Pyrodigal	CDS	50102	51205	.	-	0	ID=GCA000153685_00053;Name=inositol-3-phosphate synthase;locus_tag=GCA000153685_00053;product=inositol-3-phosphate synthase;Dbxref=GO:0004512,GO:0006021,GO:0008654;gene=ino1;Parent=GCA000153685_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1260,COG:I,KEGG:K01858,RefSeq:WP_003400492.1,SO:0001217,UniParc:UPI0000164F21,UniRef:UniRef100_P9WKI0,UniRef:UniRef50_P9WKI0,UniRef:UniRef90_P9WKI0;ec_number=5.5.1.4
contig_1	Pyrodigal	gene	51266	51808	.	-	.	ID=GCA000153685_00054_gene;locus_tag=GCA000153685_00054;gene=padR
contig_1	Pyrodigal	CDS	51266	51808	.	-	0	ID=GCA000153685_00054;Name=Transcription regulator PadR N-terminal domain-containing protein;locus_tag=GCA000153685_00054;product=Transcription regulator PadR N-terminal domain-containing protein;gene=padR;Parent=GCA000153685_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899787.1,SO:0001217,UniParc:UPI00000CCC19,UniRef:UniRef100_P71704,UniRef:UniRef50_Q9CCY3,UniRef:UniRef90_Q7DAJ4
contig_1	Pyrodigal	gene	51909	52778	.	-	.	ID=GCA000153685_00055_gene;locus_tag=GCA000153685_00055
contig_1	Pyrodigal	CDS	51909	52778	.	-	0	ID=GCA000153685_00055;Name=putative protein Rv0048c;locus_tag=GCA000153685_00055;product=putative protein Rv0048c;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900795.1,SO:0001217,UniParc:UPI0000164F23,UniRef:UniRef100_P9WM86,UniRef:UniRef50_P9WM87,UniRef:UniRef90_P9WM87
contig_1	Pyrodigal	gene	52912	53325	.	+	.	ID=GCA000153685_00056_gene;locus_tag=GCA000153685_00056
contig_1	Pyrodigal	CDS	52912	53325	.	+	0	ID=GCA000153685_00056;Name=putative protein Mb0050;locus_tag=GCA000153685_00056;product=putative protein Mb0050;Parent=GCA000153685_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400504.1,SO:0001217,UniParc:UPI000013918F,UniRef:UniRef100_P9WM85,UniRef:UniRef50_P9WM85,UniRef:UniRef90_P9WM85
contig_1	Pyrodigal	gene	53318	55780	.	+	.	ID=GCA000153685_00057_gene;locus_tag=GCA000153685_00057;gene=ponA1
contig_1	Pyrodigal	CDS	53318	55780	.	+	0	ID=GCA000153685_00057;Name=transglycosylase/D%2CD-transpeptidase PonA1;locus_tag=GCA000153685_00057;product=transglycosylase/D%2CD-transpeptidase PonA1;gene=ponA1;Parent=GCA000153685_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899790,RefSeq:WP_003900796.1,SO:0001217,UniParc:UPI00012780DD,UniRef:UniRef100_A0A0H3L8C5,UniRef:UniRef50_Q744V9,UniRef:UniRef90_A0A0H3L8C5
contig_1	Pyrodigal	gene	55777	57459	.	+	.	ID=GCA000153685_00058_gene;locus_tag=GCA000153685_00058
contig_1	Pyrodigal	CDS	55777	57459	.	+	0	ID=GCA000153685_00058;Name=Transmembrane protein;locus_tag=GCA000153685_00058;product=Transmembrane protein;Parent=GCA000153685_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400514.1,SO:0001217,UniParc:UPI00000CCC1A,UniRef:UniRef100_A5TYC2,UniRef:UniRef50_A0A0N9YJ61,UniRef:UniRef90_Q7DAJ3
contig_1	Pyrodigal	gene	57416	58054	.	+	.	ID=GCA000153685_00059_gene;locus_tag=GCA000153685_00059
contig_1	Pyrodigal	CDS	57416	58054	.	+	0	ID=GCA000153685_00059;Name=DJ-1/PfpI domain-containing protein;locus_tag=GCA000153685_00059;product=DJ-1/PfpI domain-containing protein;Parent=GCA000153685_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899791.1,SO:0001217,UniParc:UPI0000164F25,UniRef:UniRef100_A0A0H3LB58,UniRef:UniRef50_A0AA37PMX0,UniRef:UniRef90_A0A0H3LB58
contig_1	Pyrodigal	gene	58273	58563	.	+	.	ID=GCA000153685_00060_gene;locus_tag=GCA000153685_00060;gene=rpsF
contig_1	Pyrodigal	CDS	58273	58563	.	+	0	ID=GCA000153685_00060;Name=30S ribosomal protein S6;locus_tag=GCA000153685_00060;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0005840,GO:0005886,GO:0006412,GO:0009274,GO:0022627,GO:0070181,GO:1990904;gene=rpsF;Parent=GCA000153685_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,RefSeq:WP_003400520.1,SO:0001217,UniParc:UPI00001350BC,UniRef:UniRef100_P9WH31,UniRef:UniRef50_A0R7F9,UniRef:UniRef90_A0R7F9
contig_1	Pyrodigal	gene	58667	59161	.	+	.	ID=GCA000153685_00061_gene;locus_tag=GCA000153685_00061;gene=ssb
contig_1	Pyrodigal	CDS	58667	59161	.	+	0	ID=GCA000153685_00061;Name=Single-stranded DNA-binding protein;locus_tag=GCA000153685_00061;product=Single-stranded DNA-binding protein;Dbxref=GO:0003697,GO:0005576,GO:0005886,GO:0006260,GO:0006974,GO:0009295,GO:0046677;gene=ssb;Parent=GCA000153685_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400534.1,SO:0001217,UniParc:UPI0000135FAE,UniRef:UniRef100_P9WGD5,UniRef:UniRef50_P9WGD5,UniRef:UniRef90_P9WGD5
contig_1	Pyrodigal	gene	59203	59457	.	+	.	ID=GCA000153685_00062_gene;locus_tag=GCA000153685_00062;gene=rpsR
contig_1	Pyrodigal	CDS	59203	59457	.	+	0	ID=GCA000153685_00062;Name=30S ribosomal protein S18;locus_tag=GCA000153685_00062;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000153685_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_003400540.1,SO:0001217,UniParc:UPI0000132F34,UniRef:UniRef100_P9WH49,UniRef:UniRef50_P9WH49,UniRef:UniRef90_P9WH49
contig_1	Pyrodigal	gene	59490	59948	.	+	.	ID=GCA000153685_00063_gene;locus_tag=GCA000153685_00063;gene=rplI
contig_1	Pyrodigal	CDS	59490	59948	.	+	0	ID=GCA000153685_00063;Name=50S ribosomal protein L9;locus_tag=GCA000153685_00063;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplI;Parent=GCA000153685_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02939,RefSeq:WP_003400543.1,SO:0001217,UniParc:UPI00001341F5,UniRef:UniRef100_P9WH79,UniRef:UniRef50_P9WH79,UniRef:UniRef90_P9WH79
contig_1	Pyrodigal	gene	59977	60498	.	+	.	ID=GCA000153685_00064_gene;locus_tag=GCA000153685_00064
contig_1	Pyrodigal	CDS	59977	60498	.	+	0	ID=GCA000153685_00064;Name=putative protein Rv0057;locus_tag=GCA000153685_00064;product=putative protein Rv0057;Parent=GCA000153685_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900797.1,SO:0001217,UniParc:UPI00001391B8,UniRef:UniRef100_P9WM77,UniRef:UniRef50_P9WM77,UniRef:UniRef90_P9WM77
contig_1	Pyrodigal	gene	60477	63101	.	+	.	ID=GCA000153685_00065_gene;locus_tag=GCA000153685_00065;gene=dnaB
contig_1	Pyrodigal	CDS	60477	63101	.	+	0	ID=GCA000153685_00065;Name=replicative DNA helicase;locus_tag=GCA000153685_00065;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003689,GO:0004519,GO:0005524,GO:0005829,GO:0006268,GO:0006269,GO:0006314,GO:0009378,GO:0016539,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990077,GO:1990518;gene=dnaB;Parent=GCA000153685_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02314,RefSeq:WP_003400547.1,SO:0001217,UniParc:UPI0000164F26,UniRef:UniRef100_P59966,UniRef:UniRef50_P9WMR3,UniRef:UniRef90_P9WMR3;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	63281	63973	.	+	.	ID=GCA000153685_00066_gene;locus_tag=GCA000153685_00066;gene=darT
contig_1	Pyrodigal	CDS	63281	63973	.	+	0	ID=GCA000153685_00066;Name=toxin-antitoxin system toxin DarT;locus_tag=GCA000153685_00066;product=toxin-antitoxin system toxin DarT;Dbxref=GO:0003677,GO:0016757,GO:0016779;gene=darT;Parent=GCA000153685_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400548,RefSeq:WP_003400548.1,SO:0001217,UniParc:UPI00000D0F66,UniRef:UniRef100_O53604,UniRef:UniRef50_O53604,UniRef:UniRef90_O53604;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	63990	65048	.	+	.	ID=GCA000153685_00067_gene;locus_tag=GCA000153685_00067;gene=darG
contig_1	Pyrodigal	CDS	63990	65048	.	+	0	ID=GCA000153685_00067;Name=DNA ADP-ribosyl glycohydrolase;locus_tag=GCA000153685_00067;product=DNA ADP-ribosyl glycohydrolase;Dbxref=GO:0005829,GO:0006974,GO:0042278,GO:0047407;gene=darG;Parent=GCA000153685_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400551.1,SO:0001217,UniParc:UPI00000D115A,UniRef:UniRef100_O53605,UniRef:UniRef50_O53605,UniRef:UniRef90_O53605;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	65093	65746	.	-	.	ID=GCA000153685_00068_gene;locus_tag=GCA000153685_00068
contig_1	Pyrodigal	CDS	65093	65746	.	-	0	ID=GCA000153685_00068;Name=Secreted protein;locus_tag=GCA000153685_00068;product=Secreted protein;Parent=GCA000153685_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E36789,UniRef:UniRef100_I6X8E6,UniRef:UniRef50_I6X8E6,UniRef:UniRef90_I6X8E6
contig_1	Pyrodigal	gene	65852	66775	.	+	.	ID=GCA000153685_00069_gene;locus_tag=GCA000153685_00069
contig_1	Pyrodigal	CDS	65852	66775	.	+	0	ID=GCA000153685_00069;Name=Glucanase;locus_tag=GCA000153685_00069;product=Glucanase;Parent=GCA000153685_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE34F,UniRef:UniRef100_A0A655BAE5,UniRef:UniRef50_Q79G13,UniRef:UniRef90_Q79G13
contig_1	Pyrodigal	gene	67004	68443	.	+	.	ID=GCA000153685_00070_gene;locus_tag=GCA000153685_00070
contig_1	Pyrodigal	CDS	67004	68443	.	+	0	ID=GCA000153685_00070;Name=Oxidoreductase;locus_tag=GCA000153685_00070;product=Oxidoreductase;Parent=GCA000153685_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901784.1,SO:0001217,UniParc:UPI00000D5E6E,UniRef:UniRef100_O53608,UniRef:UniRef50_A0A498PTX9,UniRef:UniRef90_A0A0T9MN63
contig_1	Pyrodigal	gene	68505	68660	.	+	.	ID=GCA000153685_00071_gene;locus_tag=GCA000153685_00071
contig_1	Pyrodigal	CDS	68505	68660	.	+	0	ID=GCA000153685_00071;Name=Transmembrane protein;locus_tag=GCA000153685_00071;product=Transmembrane protein;Parent=GCA000153685_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D6F9,UniRef:UniRef100_A0A0H3L8D9,UniRef:UniRef50_R4LR07,UniRef:UniRef90_R4LR07
contig_1	Pyrodigal	gene	68701	71640	.	+	.	ID=GCA000153685_00072_gene;locus_tag=GCA000153685_00072
contig_1	Pyrodigal	CDS	68701	71640	.	+	0	ID=GCA000153685_00072;Name=UPF0182 protein Mb0065;locus_tag=GCA000153685_00072;product=UPF0182 protein Mb0065;Dbxref=GO:0005576,GO:0005886;Parent=GCA000153685_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09118,RefSeq:WP_015345008.1,SO:0001217,UniParc:UPI0002A7EA5C,UniRef:UniRef100_A0A1K3PWT8,UniRef:UniRef50_P9WFL5,UniRef:UniRef90_P9WFL5
contig_1	Pyrodigal	gene	71707	71946	.	+	.	ID=GCA000153685_00073_gene;locus_tag=GCA000153685_00073;gene=vapB1
contig_1	Pyrodigal	CDS	71707	71946	.	+	0	ID=GCA000153685_00073;Name=Putative antitoxin VapB1;locus_tag=GCA000153685_00073;product=Putative antitoxin VapB1;Dbxref=GO:0006355;gene=vapB1;Parent=GCA000153685_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400577.1,SO:0001217,UniParc:UPI00005EE352,UniRef:UniRef100_P0CW29,UniRef:UniRef50_P0CW29,UniRef:UniRef90_P0CW29
contig_1	Pyrodigal	gene	71939	72340	.	+	.	ID=GCA000153685_00074_gene;locus_tag=GCA000153685_00074;gene=vapC1
contig_1	Pyrodigal	CDS	71939	72340	.	+	0	ID=GCA000153685_00074;Name=type II toxin-antitoxin system ribonuclease VapC1;locus_tag=GCA000153685_00074;product=type II toxin-antitoxin system ribonuclease VapC1;Dbxref=GO:0000287,GO:0004540;gene=vapC1;Parent=GCA000153685_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400580,RefSeq:WP_003400580.1,SO:0001217,UniParc:UPI00000D10C5,UniRef:UniRef100_P9WFC1,UniRef:UniRef50_P9WFC1,UniRef:UniRef90_P9WFC1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	72392	74629	.	-	.	ID=GCA000153685_00075_gene;locus_tag=GCA000153685_00075;gene=icd-2
contig_1	Pyrodigal	CDS	72392	74629	.	-	0	ID=GCA000153685_00075;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000153685_00075;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0005576,GO:0005829,GO:0005886,GO:0006097,GO:0006099,GO:0006102,GO:0009274,GO:0042803;gene=icd-2;Parent=GCA000153685_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00031,RefSeq:WP_003899797.1,SO:0001217,UniParc:UPI00000D5F8F,UniRef:UniRef100_O53611,UniRef:UniRef50_O53611,UniRef:UniRef90_O53611;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	74747	75316	.	-	.	ID=GCA000153685_00076_gene;locus_tag=GCA000153685_00076
contig_1	Pyrodigal	CDS	74747	75316	.	-	0	ID=GCA000153685_00076;Name=putative transcriptional regulatory protein (Possibly TetR-family);locus_tag=GCA000153685_00076;product=putative transcriptional regulatory protein (Possibly TetR-family);Parent=GCA000153685_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400591.1,SO:0001217,UniParc:UPI00000D5F22,UniRef:UniRef100_O53612,UniRef:UniRef50_A0A1X2CD97,UniRef:UniRef90_O53612
contig_1	Pyrodigal	gene	75419	76330	.	+	.	ID=GCA000153685_00077_gene;locus_tag=GCA000153685_00077
contig_1	Pyrodigal	CDS	75419	76330	.	+	0	ID=GCA000153685_00077;Name=Oxidoreductase;locus_tag=GCA000153685_00077;product=Oxidoreductase;Parent=GCA000153685_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899798.1,SO:0001217,UniParc:UPI0000164F29,UniRef:UniRef100_A0A0H3LB78,UniRef:UniRef50_G8RW98,UniRef:UniRef90_A0A655I8C3
contig_1	Pyrodigal	gene	76355	77740	.	-	.	ID=GCA000153685_00078_gene;locus_tag=GCA000153685_00078;gene=sdaA
contig_1	Pyrodigal	CDS	76355	77740	.	-	0	ID=GCA000153685_00078;Name=L-serine ammonia-lyase;locus_tag=GCA000153685_00078;product=L-serine ammonia-lyase;Dbxref=GO:0003941,GO:0005886,GO:0006094,GO:0046872,GO:0051539;gene=sdaA;Parent=GCA000153685_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01752,RefSeq:WP_003400600.1,SO:0001217,UniParc:UPI0000135734,UniRef:UniRef100_P9WGT5,UniRef:UniRef50_P9WGT5,UniRef:UniRef90_P9WGT5;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	77737	79014	.	-	.	ID=GCA000153685_00079_gene;locus_tag=GCA000153685_00079;gene=glyA2
contig_1	Pyrodigal	CDS	77737	79014	.	-	0	ID=GCA000153685_00079;Name=Serine hydroxymethyltransferase 2;locus_tag=GCA000153685_00079;product=Serine hydroxymethyltransferase 2;Dbxref=GO:0004372,GO:0005737,GO:0005829,GO:0005886,GO:0006544,GO:0006563,GO:0019264,GO:0030170,GO:0035999,GO:0042803,GO:0046653;gene=glyA2;Parent=GCA000153685_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00600,RefSeq:WP_003899799.1,SO:0001217,UniParc:UPI000012B4E6,UniRef:UniRef100_P9WGI7,UniRef:UniRef50_P9WGI7,UniRef:UniRef90_P9WGI7;ec_number=2.1.2.1
contig_1	Infernal	regulatory_region	79322	79412	2.1e-09	-	.	ID=FNJOPAJJMO_82;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	79604	80329	.	+	.	ID=GCA000153685_00080_gene;locus_tag=GCA000153685_00080
contig_1	Pyrodigal	CDS	79604	80329	.	+	0	ID=GCA000153685_00080;Name=Reverse transcriptase domain-containing protein;locus_tag=GCA000153685_00080;product=Reverse transcriptase domain-containing protein;Parent=GCA000153685_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00986,RefSeq:WP_003899800.1,SO:0001217,UniParc:UPI00005F63DD,UniRef:UniRef100_A0A0H3L4U2,UniRef:UniRef50_A0A0H3L4U2,UniRef:UniRef90_A0A0H3L4U2;ec_number=2.7.7.49
contig_1	Pyrodigal	gene	80760	81809	.	+	.	ID=GCA000153685_00081_gene;locus_tag=GCA000153685_00081
contig_1	Pyrodigal	CDS	80760	81809	.	+	0	ID=GCA000153685_00081;Name=putative ABC transporter permease Rv0072;locus_tag=GCA000153685_00081;product=putative ABC transporter permease Rv0072;Dbxref=GO:0005576,GO:0005886;Parent=GCA000153685_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400616.1,SO:0001217,UniParc:UPI00000D5FC5,UniRef:UniRef100_P9WG17,UniRef:UniRef50_P9WG17,UniRef:UniRef90_P9WG17
contig_1	Pyrodigal	gene	81812	82804	.	+	.	ID=GCA000153685_00082_gene;locus_tag=GCA000153685_00082
contig_1	Pyrodigal	CDS	81812	82804	.	+	0	ID=GCA000153685_00082;Name=putative ABC transporter ATP-binding protein Rv0073;locus_tag=GCA000153685_00082;product=putative ABC transporter ATP-binding protein Rv0073;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0055085;Parent=GCA000153685_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899801.1,SO:0001217,UniParc:UPI00000D5E82,UniRef:UniRef100_P9WQK5,UniRef:UniRef50_P9WQK5,UniRef:UniRef90_P9WQK5
contig_1	Pyrodigal	gene	82884	84119	.	+	.	ID=GCA000153685_00083_gene;locus_tag=GCA000153685_00083
contig_1	Pyrodigal	CDS	82884	84119	.	+	0	ID=GCA000153685_00083;Name=Conserved protein;locus_tag=GCA000153685_00083;product=Conserved protein;Parent=GCA000153685_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400620.1,SO:0001217,UniParc:UPI00000D105B,UniRef:UniRef100_O53619,UniRef:UniRef50_A0A1X2LQV9,UniRef:UniRef90_O53619
contig_1	Pyrodigal	gene	84132	85304	.	+	.	ID=GCA000153685_00084_gene;locus_tag=GCA000153685_00084
contig_1	Pyrodigal	CDS	84132	85304	.	+	0	ID=GCA000153685_00084;Name=cysteine-S-conjugate beta-lyase;locus_tag=GCA000153685_00084;product=cysteine-S-conjugate beta-lyase;Parent=GCA000153685_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400622.1,SO:0001217,UniParc:UPI00000D5F7E,UniRef:UniRef100_O53620,UniRef:UniRef50_O53620,UniRef:UniRef90_O53620
contig_1	Pyrodigal	gene	85319	85708	.	-	.	ID=GCA000153685_00085_gene;locus_tag=GCA000153685_00085
contig_1	Pyrodigal	CDS	85319	85708	.	-	0	ID=GCA000153685_00085;Name=Transmembrane protein;locus_tag=GCA000153685_00085;product=Transmembrane protein;Parent=GCA000153685_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400629.1,SO:0001217,UniParc:UPI00000D1122,UniRef:UniRef100_A5TYE7,UniRef:UniRef50_A0A0H3LB89,UniRef:UniRef90_A0A0H3LB89
contig_1	Pyrodigal	gene	85772	86602	.	-	.	ID=GCA000153685_00086_gene;locus_tag=GCA000153685_00086
contig_1	Pyrodigal	CDS	85772	86602	.	-	0	ID=GCA000153685_00086;Name=Alpha/beta fold family hydrolase;locus_tag=GCA000153685_00086;product=Alpha/beta fold family hydrolase;Parent=GCA000153685_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900801.1,SO:0001217,UniParc:UPI0000165207,UniRef:UniRef100_A0A0H3L4J2,UniRef:UniRef50_A0A654TPX0,UniRef:UniRef90_A0A654TPX0
contig_1	Pyrodigal	gene	86664	87269	.	+	.	ID=GCA000153685_00087_gene;locus_tag=GCA000153685_00087;gene=acrR
contig_1	Pyrodigal	CDS	86664	87269	.	+	0	ID=GCA000153685_00087;Name=putative acrAB operon repressor;locus_tag=GCA000153685_00087;product=putative acrAB operon repressor;gene=acrR;Parent=GCA000153685_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_003899803.1,SO:0001217,UniParc:UPI00000D5ED8,UniRef:UniRef100_A5TYE9,UniRef:UniRef50_Q7APS2,UniRef:UniRef90_A0A3S4FJJ5
contig_1	Pyrodigal	gene	87344	87937	.	-	.	ID=GCA000153685_00088_gene;locus_tag=GCA000153685_00088
contig_1	Pyrodigal	CDS	87344	87937	.	-	0	ID=GCA000153685_00088;Name=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;locus_tag=GCA000153685_00088;product=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;Parent=GCA000153685_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400645.1,SO:0001217,UniParc:UPI00000D2B2A,UniRef:UniRef100_L7N686,UniRef:UniRef50_L7N686,UniRef:UniRef90_L7N686
contig_1	Pyrodigal	gene	87934	88140	.	-	.	ID=GCA000153685_00089_gene;locus_tag=GCA000153685_00089
contig_1	Pyrodigal	CDS	87934	88140	.	-	0	ID=GCA000153685_00089;Name=Conserved protein;locus_tag=GCA000153685_00089;product=Conserved protein;Parent=GCA000153685_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400649.1,SO:0001217,UniParc:UPI000153404F,UniRef:UniRef100_I6X8G2,UniRef:UniRef50_I6X8G2,UniRef:UniRef90_I6X8G2
contig_1	Pyrodigal	gene	88340	89161	.	+	.	ID=GCA000153685_00090_gene;locus_tag=GCA000153685_00090
contig_1	Pyrodigal	CDS	88340	89161	.	+	0	ID=GCA000153685_00090;Name=dormancy-associated translation inhibitor;locus_tag=GCA000153685_00090;product=dormancy-associated translation inhibitor;Dbxref=GO:0005886,GO:0009274,GO:0022627,GO:0043024,GO:0045900;Parent=GCA000153685_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400655,RefSeq:WP_003400655.1,SO:0001217,UniParc:UPI00000D0F34,UniRef:UniRef100_P9WMA9,UniRef:UniRef50_P9WMA9,UniRef:UniRef90_P9WMA9
contig_1	Pyrodigal	gene	89158	89616	.	+	.	ID=GCA000153685_00091_gene;locus_tag=GCA000153685_00091
contig_1	Pyrodigal	CDS	89158	89616	.	+	0	ID=GCA000153685_00091;Name=putative protein Rv0080;locus_tag=GCA000153685_00091;product=putative protein Rv0080;Parent=GCA000153685_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899804.1,SO:0001217,UniParc:UPI00000CCB85,UniRef:UniRef100_P9WMA5,UniRef:UniRef50_P9WMA5,UniRef:UniRef90_P9WMA5
contig_1	Pyrodigal	gene	89711	90055	.	+	.	ID=GCA000153685_00092_gene;locus_tag=GCA000153685_00092
contig_1	Pyrodigal	CDS	89711	90055	.	+	0	ID=GCA000153685_00092;Name=putative HTH-type transcriptional regulator Rv0081;locus_tag=GCA000153685_00092;product=putative HTH-type transcriptional regulator Rv0081;Dbxref=GO:0003677,GO:0003700,GO:0005886;Parent=GCA000153685_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400657.1,SO:0001217,UniParc:UPI00000D5F9D,UniRef:UniRef100_P9WMI7,UniRef:UniRef50_P9WMI7,UniRef:UniRef90_P9WMI7
contig_1	Pyrodigal	gene	90060	90539	.	+	.	ID=GCA000153685_00093_gene;locus_tag=GCA000153685_00093
contig_1	Pyrodigal	CDS	90060	90539	.	+	0	ID=GCA000153685_00093;Name=Formate hydrogenlyase subunit 7;locus_tag=GCA000153685_00093;product=Formate hydrogenlyase subunit 7;Parent=GCA000153685_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400658.1,SO:0001217,UniParc:UPI0000164F2B,UniRef:UniRef100_A5TYF5,UniRef:UniRef50_A0A3A9ZWH7,UniRef:UniRef90_A0A7Z7INH0
contig_1	Pyrodigal	gene	90536	92458	.	+	.	ID=GCA000153685_00094_gene;locus_tag=GCA000153685_00094
contig_1	Pyrodigal	CDS	90536	92458	.	+	0	ID=GCA000153685_00094;Name=putative protein Rv0083;locus_tag=GCA000153685_00094;product=putative protein Rv0083;Dbxref=GO:0005886,GO:0008137,GO:0042773;Parent=GCA000153685_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907280.1,SO:0001217,UniParc:UPI0000139199,UniRef:UniRef100_P9WIW3,UniRef:UniRef50_P9WIW3,UniRef:UniRef90_P9WIW3
contig_1	Pyrodigal	gene	92464	93414	.	+	.	ID=GCA000153685_00095_gene;locus_tag=GCA000153685_00095;gene=hycD
contig_1	Pyrodigal	CDS	92464	93414	.	+	0	ID=GCA000153685_00095;Name=putative formate hydrogenlyase HycD (FHL);locus_tag=GCA000153685_00095;product=putative formate hydrogenlyase HycD (FHL);gene=hycD;Parent=GCA000153685_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900802.1,SO:0001217,UniParc:UPI00000D11F9,UniRef:UniRef100_Q10881,UniRef:UniRef50_L7V9U5,UniRef:UniRef90_Q10881
contig_1	Pyrodigal	gene	93425	94087	.	+	.	ID=GCA000153685_00096_gene;locus_tag=GCA000153685_00096
contig_1	Pyrodigal	CDS	93425	94087	.	+	0	ID=GCA000153685_00096;Name=putative protein Mb0088;locus_tag=GCA000153685_00096;product=putative protein Mb0088;Dbxref=GO:0005886;Parent=GCA000153685_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12140,RefSeq:WP_003400661.1,SO:0001217,UniParc:UPI0000139225,UniRef:UniRef100_P9WM75,UniRef:UniRef50_P9WM75,UniRef:UniRef90_P9WM75;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	94087	95553	.	+	.	ID=GCA000153685_00097_gene;locus_tag=GCA000153685_00097
contig_1	Pyrodigal	CDS	94087	95553	.	+	0	ID=GCA000153685_00097;Name=Putative hydrogenase HYCQ;locus_tag=GCA000153685_00097;product=Putative hydrogenase HYCQ;Parent=GCA000153685_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900803.1,SO:0001217,UniParc:UPI0001278142,UniRef:UniRef100_A0A0H3L4K1,UniRef:UniRef50_L7V5Z8,UniRef:UniRef90_A0A654T4B5
contig_1	Pyrodigal	gene	95553	97028	.	+	.	ID=GCA000153685_00098_gene;locus_tag=GCA000153685_00098;gene=hycE
contig_1	Pyrodigal	CDS	95553	97028	.	+	0	ID=GCA000153685_00098;Name=putative formate hydrogenase HycE (FHL);locus_tag=GCA000153685_00098;product=putative formate hydrogenase HycE (FHL);gene=hycE;Parent=GCA000153685_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE35A,UniRef:UniRef100_Q10884,UniRef:UniRef50_F8AZS3,UniRef:UniRef90_Q10884
contig_1	Pyrodigal	gene	97258	97737	.	+	.	ID=GCA000153685_00099_gene;locus_tag=GCA000153685_00099
contig_1	Pyrodigal	CDS	97258	97737	.	+	0	ID=GCA000153685_00099;Name=putative protein Rv0088;locus_tag=GCA000153685_00099;product=putative protein Rv0088;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899806.1,SO:0001217,UniParc:UPI0000EF3297,UniRef:UniRef100_A0A0U0R1C9,UniRef:UniRef50_P9WM73,UniRef:UniRef90_P9WM73
contig_1	Pyrodigal	gene	97894	98487	.	+	.	ID=GCA000153685_00100_gene;locus_tag=GCA000153685_00100
contig_1	Pyrodigal	CDS	97894	98487	.	+	0	ID=GCA000153685_00100;Name=putative methyltransferase Rv0089;locus_tag=GCA000153685_00100;product=putative methyltransferase Rv0089;Dbxref=GO:0008168,GO:0008757,GO:0009274,GO:0032259;Parent=GCA000153685_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400665.1,SO:0001217,UniParc:UPI0000139233,UniRef:UniRef100_P9WK03,UniRef:UniRef50_P9WK03,UniRef:UniRef90_P9WK03;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	98616	99386	.	+	.	ID=GCA000153685_00101_gene;locus_tag=GCA000153685_00101
contig_1	Pyrodigal	CDS	98616	99386	.	+	0	ID=GCA000153685_00101;Name=putative protein Rv0090;locus_tag=GCA000153685_00101;product=putative protein Rv0090;Dbxref=GO:0005886;Parent=GCA000153685_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899807.1,SO:0001217,UniParc:UPI0000139236,UniRef:UniRef100_P9WM71,UniRef:UniRef50_P9WM71,UniRef:UniRef90_P9WM71
contig_1	Pyrodigal	gene	99820	100587	.	+	.	ID=GCA000153685_00102_gene;locus_tag=GCA000153685_00102;gene=mtnN
contig_1	Pyrodigal	CDS	99820	100587	.	+	0	ID=GCA000153685_00102;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA000153685_00102;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019284,GO:0019509;gene=mtnN;Parent=GCA000153685_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01243,RefSeq:WP_003400678.1,SO:0001217,UniParc:UPI000012F813,UniRef:UniRef100_P9WJM3,UniRef:UniRef50_P9WJM3,UniRef:UniRef90_P9WJM3;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	100719	103004	.	+	.	ID=GCA000153685_00103_gene;locus_tag=GCA000153685_00103;gene=ctpA
contig_1	Pyrodigal	CDS	100719	103004	.	+	0	ID=GCA000153685_00103;Name=Copper-exporting P-type ATPase;locus_tag=GCA000153685_00103;product=Copper-exporting P-type ATPase;Dbxref=GO:0005507,GO:0005524,GO:0005576,GO:0005886,GO:0009274,GO:0016020,GO:0016887,GO:0043682,GO:0055070,GO:0140581;gene=ctpA;Parent=GCA000153685_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K17686,RefSeq:WP_003899808.1,SO:0001217,UniParc:UPI000012863C,UniRef:UniRef100_P9WPU1,UniRef:UniRef50_P9WPU1,UniRef:UniRef90_P9WPU1;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	102951	103661	.	-	.	ID=GCA000153685_00104_gene;locus_tag=GCA000153685_00104
contig_1	Pyrodigal	CDS	102951	103661	.	-	0	ID=GCA000153685_00104;Name=putative protein Rv0093c;locus_tag=GCA000153685_00104;product=putative protein Rv0093c;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912510.1,SO:0001217,UniParc:UPI00005EE35D,UniRef:UniRef100_P9WM69,UniRef:UniRef50_P9WM69,UniRef:UniRef90_P9WM69
contig_1	Pyrodigal	gene	103846	104805	.	-	.	ID=GCA000153685_00105_gene;locus_tag=GCA000153685_00105
contig_1	Pyrodigal	CDS	103846	104805	.	-	0	ID=GCA000153685_00105;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_00105;product=HNH nuclease domain-containing protein;Parent=GCA000153685_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q50655,UniRef:UniRef90_Q50655
contig_1	Pyrodigal	gene	104941	105306	.	-	.	ID=GCA000153685_00106_gene;locus_tag=GCA000153685_00106
contig_1	Pyrodigal	CDS	104941	105306	.	-	0	ID=GCA000153685_00106;Name=Putative putative protein Rv0095c;locus_tag=GCA000153685_00106;product=Putative putative protein Rv0095c;Parent=GCA000153685_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B3A,UniRef:UniRef100_A0A0E9AND5,UniRef:UniRef50_Q10891,UniRef:UniRef90_Q10891
contig_1	Pyrodigal	gene	105460	106851	.	+	.	ID=GCA000153685_00107_gene;locus_tag=GCA000153685_00107;gene=pPE1
contig_1	Pyrodigal	CDS	105460	106851	.	+	0	ID=GCA000153685_00107;Name=putative PPE family protein PPE1;locus_tag=GCA000153685_00107;product=putative PPE family protein PPE1;Dbxref=GO:0005886,GO:0052572;gene=pPE1;Parent=GCA000153685_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900806.1,SO:0001217,UniParc:UPI0001278176,UniRef:UniRef100_A0A0H3L4H7,UniRef:UniRef50_P9WI49,UniRef:UniRef90_P9WI49
contig_1	Pyrodigal	gene	106870	107739	.	+	.	ID=GCA000153685_00108_gene;locus_tag=GCA000153685_00108
contig_1	Pyrodigal	CDS	106870	107739	.	+	0	ID=GCA000153685_00108;Name=Oxidoreductase;locus_tag=GCA000153685_00108;product=Oxidoreductase;Parent=GCA000153685_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K25987,RefSeq:WP_003900807.1,SO:0001217,UniParc:UPI0001278177,UniRef:UniRef100_A0A0H3L8I1,UniRef:UniRef50_B2HKM3,UniRef:UniRef90_A0A0H3L8I1;ec_number=1.14.11.78
contig_1	Pyrodigal	gene	107736	108287	.	+	.	ID=GCA000153685_00109_gene;locus_tag=GCA000153685_00109;gene=fcoT
contig_1	Pyrodigal	CDS	107736	108287	.	+	0	ID=GCA000153685_00109;Name=fatty acyl CoA thioesterase FcoT;locus_tag=GCA000153685_00109;product=fatty acyl CoA thioesterase FcoT;Dbxref=GO:0005886,GO:0006633,GO:0016829,GO:0047617;gene=fcoT;Parent=GCA000153685_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899810,KEGG:K26055,RefSeq:WP_003899810.1,SO:0001217,UniParc:UPI0000139256,UniRef:UniRef100_P9WM67,UniRef:UniRef50_P9WM67,UniRef:UniRef90_P9WM67;ec_number=4.3.2.11
contig_1	Pyrodigal	gene	108316	109914	.	+	.	ID=GCA000153685_00110_gene;locus_tag=GCA000153685_00110;gene=fadD10
contig_1	Pyrodigal	CDS	108316	109914	.	+	0	ID=GCA000153685_00110;Name=fatty acid--CoA ligase FadD10;locus_tag=GCA000153685_00110;product=fatty acid--CoA ligase FadD10;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0006631,GO:0008922,GO:0031956,GO:0046872;gene=fadD10;Parent=GCA000153685_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12422,RefSeq:WP_003916215.1,SO:0001217,UniParc:UPI000169A5EB,UniRef:UniRef100_P9WQ55,UniRef:UniRef50_P9WQ55,UniRef:UniRef90_P9WQ55;ec_number=6.2.1.47
contig_1	Pyrodigal	gene	109907	110155	.	+	.	ID=GCA000153685_00111_gene;locus_tag=GCA000153685_00111
contig_1	Pyrodigal	CDS	109907	110155	.	+	0	ID=GCA000153685_00111;Name=Acyl carrier protein Rv0100;locus_tag=GCA000153685_00111;product=Acyl carrier protein Rv0100;Dbxref=GO:0006631;Parent=GCA000153685_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE360,UniRef:UniRef100_A0A0E8VPN7,UniRef:UniRef50_B2HKM0,UniRef:UniRef90_P9WM65
contig_1	Pyrodigal	gene	110137	117675	.	+	.	ID=GCA000153685_00112_gene;locus_tag=GCA000153685_00112;gene=nrp
contig_1	Pyrodigal	CDS	110137	117675	.	+	0	ID=GCA000153685_00112;Name=non-ribosomal peptide synthetase Nrp;locus_tag=GCA000153685_00112;product=non-ribosomal peptide synthetase Nrp;Dbxref=GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0008610,GO:0009274,GO:0016740,GO:0016874,GO:0031177,GO:0043041,GO:0044281,GO:0044550;gene=nrp;Parent=GCA000153685_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400794,RefSeq:WP_003400794.1,SO:0001217,UniParc:UPI00000D5046,UniRef:UniRef100_Q10896,UniRef:UniRef50_Q10896,UniRef:UniRef90_Q10896;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	117913	119835	.	+	.	ID=GCA000153685_00113_gene;locus_tag=GCA000153685_00113
contig_1	Pyrodigal	CDS	117913	119835	.	+	0	ID=GCA000153685_00113;Name=putative protein Mb0105;locus_tag=GCA000153685_00113;product=putative protein Mb0105;Dbxref=GO:0005886;Parent=GCA000153685_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02351,SO:0001217,UniParc:UPI00005EE362,UniRef:UniRef100_P9WM63,UniRef:UniRef50_P9WM63,UniRef:UniRef90_P9WM63
contig_1	Pyrodigal	gene	120051	122309	.	-	.	ID=GCA000153685_00114_gene;locus_tag=GCA000153685_00114;gene=ctpB
contig_1	Pyrodigal	CDS	120051	122309	.	-	0	ID=GCA000153685_00114;Name=Cation-transporting P-type ATPase B;locus_tag=GCA000153685_00114;product=Cation-transporting P-type ATPase B;Dbxref=GO:0003689,GO:0005507,GO:0005524,GO:0005829,GO:0005886,GO:0016020,GO:0016887,GO:0043682,GO:0055070,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ctpB;Parent=GCA000153685_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12949,RefSeq:WP_003400797.1,SO:0001217,UniParc:UPI0000164F2E,UniRef:UniRef100_P59947,UniRef:UniRef50_P9WPT9,UniRef:UniRef90_P9WPT9;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	122453	123967	.	+	.	ID=GCA000153685_00115_gene;locus_tag=GCA000153685_00115
contig_1	Pyrodigal	CDS	122453	123967	.	+	0	ID=GCA000153685_00115;Name=putative protein Rv0104;locus_tag=GCA000153685_00115;product=putative protein Rv0104;Dbxref=GO:0003700,GO:0005829,GO:0005886;Parent=GCA000153685_00115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899813.1,SO:0001217,UniParc:UPI0000139286,UniRef:UniRef100_P9WM61,UniRef:UniRef50_P9WM61,UniRef:UniRef90_P9WM61
contig_1	Pyrodigal	gene	124116	124400	.	-	.	ID=GCA000153685_00116_gene;locus_tag=GCA000153685_00116;gene=rpmB
contig_1	Pyrodigal	CDS	124116	124400	.	-	0	ID=GCA000153685_00116;Name=50S ribosomal protein L28;locus_tag=GCA000153685_00116;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000153685_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400802.1,SO:0001217,UniParc:UPI0000132F93,UniRef:UniRef100_P9WHB1,UniRef:UniRef50_P9WHB1,UniRef:UniRef90_P9WHB1
contig_1	Pyrodigal	gene	124510	125706	.	+	.	ID=GCA000153685_00117_gene;locus_tag=GCA000153685_00117;gene=mrf
contig_1	Pyrodigal	CDS	124510	125706	.	+	0	ID=GCA000153685_00117;Name=ribosome hibernation factor-recruiting GTPase MRF;locus_tag=GCA000153685_00117;product=ribosome hibernation factor-recruiting GTPase MRF;Dbxref=GO:0005525,GO:0016787;gene=mrf;Parent=GCA000153685_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400804.1,SO:0001217,UniParc:UPI000013928E,UniRef:UniRef100_P9WPI5,UniRef:UniRef50_P9WPI5,UniRef:UniRef90_P9WPI5;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	125801	130678	.	-	.	ID=GCA000153685_00118_gene;locus_tag=GCA000153685_00118;gene=ctpI
contig_1	Pyrodigal	CDS	125801	130678	.	-	0	ID=GCA000153685_00118;Name=putative cation-transporting ATPase I;locus_tag=GCA000153685_00118;product=putative cation-transporting ATPase I;Dbxref=GO:0003689,GO:0005388,GO:0005524,GO:0005886,GO:0016887,GO:0043231,GO:0046872,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ctpI;Parent=GCA000153685_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12955,RefSeq:WP_003899815.1,SO:0001217,UniParc:UPI0000128647,UniRef:UniRef100_P9WPS4,UniRef:UniRef50_P9WPS5,UniRef:UniRef90_P9WPS4;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	131032	131274	.	-	.	ID=GCA000153685_00119_gene;locus_tag=GCA000153685_00119
contig_1	Pyrodigal	CDS	131032	131274	.	-	0	ID=GCA000153685_00119;Name=Oxidoreductase;locus_tag=GCA000153685_00119;product=Oxidoreductase;Parent=GCA000153685_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62420,UniRef:UniRef100_A0A0E8W2U8,UniRef:UniRef50_A0A101AH54,UniRef:UniRef90_O53630
contig_1	Pyrodigal	gene	131520	133010	.	+	.	ID=GCA000153685_00120_gene;locus_tag=GCA000153685_00120
contig_1	Pyrodigal	CDS	131520	133010	.	+	0	ID=GCA000153685_00120;Name=PE-PGRS family protein PE_PGRS1;locus_tag=GCA000153685_00120;product=PE-PGRS family protein PE_PGRS1;Parent=GCA000153685_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003909149.1,SO:0001217,UniParc:UPI00001A8E7A,UniRef:UniRef100_Q8VKR5,UniRef:UniRef50_L0T2H7,UniRef:UniRef90_L0T2H7
contig_1	Pyrodigal	gene	133158	133907	.	+	.	ID=GCA000153685_00121_gene;locus_tag=GCA000153685_00121
contig_1	Pyrodigal	CDS	133158	133907	.	+	0	ID=GCA000153685_00121;Name=Rhomboid protease 1;locus_tag=GCA000153685_00121;product=Rhomboid protease 1;Parent=GCA000153685_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400822.1,SO:0001217,UniParc:UPI000016520A,UniRef:UniRef100_E2IBS3,UniRef:UniRef50_A0A448J124,UniRef:UniRef90_E2IBS3
contig_1	Pyrodigal	gene	134088	136145	.	+	.	ID=GCA000153685_00122_gene;locus_tag=GCA000153685_00122
contig_1	Pyrodigal	CDS	134088	136145	.	+	0	ID=GCA000153685_00122;Name=putative transmembrane acyltransferase;locus_tag=GCA000153685_00122;product=putative transmembrane acyltransferase;Parent=GCA000153685_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900811.1,SO:0001217,UniParc:UPI00000D4FB5,UniRef:UniRef100_O53633,UniRef:UniRef50_O53633,UniRef:UniRef90_O53633
contig_1	Pyrodigal	gene	136427	137383	.	+	.	ID=GCA000153685_00123_gene;locus_tag=GCA000153685_00123
contig_1	Pyrodigal	CDS	136427	137383	.	+	0	ID=GCA000153685_00123;Name=putative GDP-mannose 4%2C6-dehydratase Gca (GDP-D-mannose dehydratase);locus_tag=GCA000153685_00123;product=putative GDP-mannose 4%2C6-dehydratase Gca (GDP-D-mannose dehydratase);Parent=GCA000153685_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400829.1,SO:0001217,UniParc:UPI00000D5FE2,UniRef:UniRef100_O53634,UniRef:UniRef50_O53634,UniRef:UniRef90_O53634
contig_1	Pyrodigal	gene	137424	138047	.	+	.	ID=GCA000153685_00124_gene;locus_tag=GCA000153685_00124;gene=gmhA
contig_1	Pyrodigal	CDS	137424	138047	.	+	0	ID=GCA000153685_00124;Name=D-sedoheptulose 7-phosphate isomerase;locus_tag=GCA000153685_00124;product=D-sedoheptulose 7-phosphate isomerase;Dbxref=GO:0005737,GO:0005975,GO:0008270,GO:0008968,GO:0097367,GO:2001061;gene=gmhA;Parent=GCA000153685_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03271,SO:0001217,UniParc:UPI0002A5705F,UniRef:UniRef100_A0A0E7ZI65,UniRef:UniRef50_P9WGG1,UniRef:UniRef90_P9WGG1;ec_number=5.3.1.28
contig_1	Pyrodigal	gene	138079	138651	.	+	.	ID=GCA000153685_00125_gene;locus_tag=GCA000153685_00125;gene=gmhB
contig_1	Pyrodigal	CDS	138079	138651	.	+	0	ID=GCA000153685_00125;Name=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;locus_tag=GCA000153685_00125;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;Dbxref=GO:0000287,GO:0005737,GO:0005975,GO:0008270,GO:0034200;gene=gmhB;Parent=GCA000153685_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400840,RefSeq:WP_003400840.1,SO:0001217,UniParc:UPI00000D3AEF,UniRef:UniRef100_P9WMV3,UniRef:UniRef50_P9WMV3,UniRef:UniRef90_P9WMV3;ec_number=5.3.1.28
contig_1	Pyrodigal	gene	138651	139811	.	+	.	ID=GCA000153685_00126_gene;locus_tag=GCA000153685_00126;gene=hddA
contig_1	Pyrodigal	CDS	138651	139811	.	+	0	ID=GCA000153685_00126;Name=D-glycero-alpha-D-manno-heptose 7-phosphate kinase;locus_tag=GCA000153685_00126;product=D-glycero-alpha-D-manno-heptose 7-phosphate kinase;Dbxref=GO:0004335,GO:0005524,GO:0005829,GO:0006012,GO:0009103,GO:0046872;gene=hddA;Parent=GCA000153685_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07031,RefSeq:WP_003899819.1,SO:0001217,UniParc:UPI00000D5E33,UniRef:UniRef100_O53637,UniRef:UniRef50_O53637,UniRef:UniRef90_O53637;ec_number=2.7.1.168
contig_1	Pyrodigal	gene	140094	140282	.	+	.	ID=GCA000153685_00127_gene;locus_tag=GCA000153685_00127
contig_1	Pyrodigal	CDS	140094	140282	.	+	0	ID=GCA000153685_00127;Name=Transposase;locus_tag=GCA000153685_00127;product=Transposase;Parent=GCA000153685_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400850.1,SO:0001217,UniParc:UPI00000D2B30,UniRef:UniRef100_A0A0H3L8K2,UniRef:UniRef50_A0A8I0JWB0,UniRef:UniRef90_A0A8I0JWB0
contig_1	Pyrodigal	gene	140405	141160	.	-	.	ID=GCA000153685_00128_gene;locus_tag=GCA000153685_00128;gene=ldtMt1
contig_1	Pyrodigal	CDS	140405	141160	.	-	0	ID=GCA000153685_00128;Name=L%2CD-transpeptidase LdtMt1;locus_tag=GCA000153685_00128;product=L%2CD-transpeptidase LdtMt1;Dbxref=GO:0005576,GO:0008360,GO:0016746,GO:0018104,GO:0042597,GO:0071555,GO:0071972;gene=ldtMt1;Parent=GCA000153685_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400856,RefSeq:WP_003400856.1,SO:0001217,UniParc:UPI00000CCB87,UniRef:UniRef100_O53638,UniRef:UniRef50_O53638,UniRef:UniRef90_O53638;ec_number=2.3.2.-
contig_1	Pyrodigal	gene	141338	142282	.	+	.	ID=GCA000153685_00129_gene;locus_tag=GCA000153685_00129;gene=oxyS
contig_1	Pyrodigal	CDS	141338	142282	.	+	0	ID=GCA000153685_00129;Name=LysR family transcriptional regulator OxyS;locus_tag=GCA000153685_00129;product=LysR family transcriptional regulator OxyS;gene=oxyS;Parent=GCA000153685_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400857,RefSeq:WP_003400857.1,SO:0001217,UniParc:UPI00000D3B16,UniRef:UniRef100_L7N677,UniRef:UniRef50_L7N677,UniRef:UniRef90_L7N677
contig_1	Pyrodigal	gene	142266	144014	.	-	.	ID=GCA000153685_00130_gene;locus_tag=GCA000153685_00130;gene=oxc
contig_1	Pyrodigal	CDS	142266	144014	.	-	0	ID=GCA000153685_00130;Name=oxalyl-CoA decarboxylase;locus_tag=GCA000153685_00130;product=oxalyl-CoA decarboxylase;Dbxref=GO:0000287,GO:0008949,GO:0030976,GO:0033611;gene=oxc;Parent=GCA000153685_00130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01577,RefSeq:WP_003900812.1,SO:0001217,UniParc:UPI00000D11B7,UniRef:UniRef100_A0A0H3L4N0,UniRef:UniRef50_P40149,UniRef:UniRef90_A0A0H3L4N0;ec_number=4.1.1.8
contig_1	Pyrodigal	gene	144136	145764	.	+	.	ID=GCA000153685_00131_gene;locus_tag=GCA000153685_00131;gene=fadD7
contig_1	Pyrodigal	CDS	144136	145764	.	+	0	ID=GCA000153685_00131;Name=FadD7 family fatty acid--CoA ligase;locus_tag=GCA000153685_00131;product=FadD7 family fatty acid--CoA ligase;gene=fadD7;Parent=GCA000153685_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F4A,UniRef:UniRef100_A0A0H3L4K5,UniRef:UniRef50_A0A0H3L4K5,UniRef:UniRef90_A0A0H3L4K5
contig_1	Pyrodigal	gene	145765	147909	.	-	.	ID=GCA000153685_00132_gene;locus_tag=GCA000153685_00132
contig_1	Pyrodigal	CDS	145765	147909	.	-	0	ID=GCA000153685_00132;Name=elongation factor G-like protein EF-G2;locus_tag=GCA000153685_00132;product=elongation factor G-like protein EF-G2;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0009274,GO:0032790;Parent=GCA000153685_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02355,RefSeq:WP_003400860.1,SO:0001217,UniParc:UPI0000164F33,UniRef:UniRef100_P9WNM8,UniRef:UniRef50_P9WNM9,UniRef:UniRef90_P9WNM9
contig_1	Pyrodigal	gene	148046	148480	.	-	.	ID=GCA000153685_00133_gene;locus_tag=GCA000153685_00133
contig_1	Pyrodigal	CDS	148046	148480	.	-	0	ID=GCA000153685_00133;Name=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;locus_tag=GCA000153685_00133;product=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;Parent=GCA000153685_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400864.1,SO:0001217,UniParc:UPI00000CCB28,UniRef:UniRef100_O07171,UniRef:UniRef50_Q7DAG0,UniRef:UniRef90_Q7DAG0
contig_1	Pyrodigal	gene	148815	148997	.	+	.	ID=GCA000153685_00134_gene;locus_tag=GCA000153685_00134
contig_1	Pyrodigal	CDS	148815	148997	.	+	0	ID=GCA000153685_00134;Name=DUF4258 domain-containing protein;locus_tag=GCA000153685_00134;product=DUF4258 domain-containing protein;Parent=GCA000153685_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE36C,UniRef:UniRef100_A0A0H3LBE5,UniRef:UniRef50_A0A076ACX0,UniRef:UniRef90_A0A076ACX0
contig_1	Pyrodigal	gene	148994	149362	.	+	.	ID=GCA000153685_00135_gene;locus_tag=GCA000153685_00135
contig_1	Pyrodigal	CDS	148994	149362	.	+	0	ID=GCA000153685_00135;Name=DNA-binding protein;locus_tag=GCA000153685_00135;product=DNA-binding protein;Parent=GCA000153685_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400878.1,SO:0001217,UniParc:UPI00000D5FDF,UniRef:UniRef100_O07173,UniRef:UniRef50_O07173,UniRef:UniRef90_O07173
contig_1	Pyrodigal	gene	149671	151314	.	+	.	ID=GCA000153685_00136_gene;locus_tag=GCA000153685_00136
contig_1	Pyrodigal	CDS	149671	151314	.	+	0	ID=GCA000153685_00136;Name=PE-PGRS family protein;locus_tag=GCA000153685_00136;product=PE-PGRS family protein;Parent=GCA000153685_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009937218.1,SO:0001217,UniParc:UPI00005EE36D,UniRef:UniRef100_A0A0H3L8L2,UniRef:UniRef50_A0A1X2DKF8,UniRef:UniRef90_A0A0H3L8L2
contig_1	Pyrodigal	gene	151466	152533	.	+	.	ID=GCA000153685_00137_gene;locus_tag=GCA000153685_00137
contig_1	Pyrodigal	CDS	151466	152533	.	+	0	ID=GCA000153685_00137;Name=Serine protease;locus_tag=GCA000153685_00137;product=Serine protease;Parent=GCA000153685_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400885.1,SO:0001217,UniParc:UPI00000319A5,UniRef:UniRef100_A5TYK0,UniRef:UniRef50_B2HLP2,UniRef:UniRef90_A5TYK0
contig_1	Pyrodigal	gene	152642	154447	.	+	.	ID=GCA000153685_00138_gene;locus_tag=GCA000153685_00138;gene=treS
contig_1	Pyrodigal	CDS	152642	154447	.	+	0	ID=GCA000153685_00138;Name=Trehalose synthase/amylase TreS;locus_tag=GCA000153685_00138;product=Trehalose synthase/amylase TreS;Dbxref=GO:0000023,GO:0000272,GO:0004556,GO:0005509,GO:0005829,GO:0005886,GO:0005977,GO:0005978,GO:0005991,GO:0005992,GO:0016161,GO:0045227,GO:0047471;gene=treS;Parent=GCA000153685_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400893.1,SO:0001217,UniParc:UPI00000D6059,UniRef:UniRef100_P9WQ19,UniRef:UniRef50_P9WQ19,UniRef:UniRef90_P9WQ19;ec_number=5.4.99.16
contig_1	Pyrodigal	gene	154550	155917	.	+	.	ID=GCA000153685_00139_gene;locus_tag=GCA000153685_00139;gene=mak
contig_1	Pyrodigal	CDS	154550	155917	.	+	0	ID=GCA000153685_00139;Name=maltokinase;locus_tag=GCA000153685_00139;product=maltokinase;Dbxref=GO:0005524,GO:0005978,GO:0005992,GO:0016301,GO:0046835;gene=mak;Parent=GCA000153685_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003916610,RefSeq:WP_003899824.1,SO:0001217,UniParc:UPI0000164F35,UniRef:UniRef100_Q7DAF6,UniRef:UniRef50_O07177,UniRef:UniRef90_O07177;ec_number=2.7.1.175
contig_1	Pyrodigal	gene	155985	156764	.	+	.	ID=GCA000153685_00140_gene;locus_tag=GCA000153685_00140
contig_1	Pyrodigal	CDS	155985	156764	.	+	0	ID=GCA000153685_00140;Name=Conserved transmembrane protein;locus_tag=GCA000153685_00140;product=Conserved transmembrane protein;Parent=GCA000153685_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899825.1,SO:0001217,UniParc:UPI00000D0F5E,UniRef:UniRef100_A5TYK3,UniRef:UniRef50_A0AAJ3NRU1,UniRef:UniRef90_A5TYK3
contig_1	Pyrodigal	gene	156896	157918	.	-	.	ID=GCA000153685_00141_gene;locus_tag=GCA000153685_00141;gene=ag85C
contig_1	Pyrodigal	CDS	156896	157918	.	-	0	ID=GCA000153685_00141;Name=diacylglycerol acyltransferase/mycolyltransferase Ag85C;locus_tag=GCA000153685_00141;product=diacylglycerol acyltransferase/mycolyltransferase Ag85C;Dbxref=GO:0004144,GO:0005576,GO:0006869,GO:0009247,GO:0009274,GO:0016020,GO:0016747,GO:0035375,GO:0046677,GO:0050348,GO:0071769;gene=ag85C;Parent=GCA000153685_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400908,RefSeq:WP_003400908.1,SO:0001217,UniParc:UPI0000042501,UniRef:UniRef100_P9WQN9,UniRef:UniRef50_P9WQN9,UniRef:UniRef90_P9WQN9;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	158165	158620	.	+	.	ID=GCA000153685_00142_gene;locus_tag=GCA000153685_00142;gene=htdZ
contig_1	Pyrodigal	CDS	158165	158620	.	+	0	ID=GCA000153685_00142;Name=3-hydroxyacyl-thioester dehydratase HtdZ;locus_tag=GCA000153685_00142;product=3-hydroxyacyl-thioester dehydratase HtdZ;Dbxref=GO:0004300,GO:0006633,GO:0018812;gene=htdZ;Parent=GCA000153685_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400912,RefSeq:WP_003400912.1,SO:0001217,UniParc:UPI00000D5F2A,UniRef:UniRef100_P9WNP3,UniRef:UniRef50_P9WNP3,UniRef:UniRef90_P9WNP3;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	158633	159976	.	-	.	ID=GCA000153685_00143_gene;locus_tag=GCA000153685_00143;gene=fadE1
contig_1	Pyrodigal	CDS	158633	159976	.	-	0	ID=GCA000153685_00143;Name=Acyl-CoA dehydrogenase FadE1;locus_tag=GCA000153685_00143;product=Acyl-CoA dehydrogenase FadE1;gene=fadE1;Parent=GCA000153685_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400917.1,SO:0001217,UniParc:UPI00000D6030,UniRef:UniRef100_A5TYK6,UniRef:UniRef50_A0A1B2AFW1,UniRef:UniRef90_A0A654ZUX5
contig_1	Pyrodigal	gene	160018	161100	.	-	.	ID=GCA000153685_00144_gene;locus_tag=GCA000153685_00144;gene=fgd2
contig_1	Pyrodigal	CDS	160018	161100	.	-	0	ID=GCA000153685_00144;Name=F420-dependent hydroxymycolic acid dehydrogenase;locus_tag=GCA000153685_00144;product=F420-dependent hydroxymycolic acid dehydrogenase;Dbxref=GO:0005886,GO:0006629,GO:0016705,GO:0030313;gene=fgd2;Parent=GCA000153685_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00120,RefSeq:WP_003899826.1,SO:0001217,UniParc:UPI00000D5037,UniRef:UniRef100_P96809,UniRef:UniRef50_P96809,UniRef:UniRef90_P96809;ec_number=1.1.98.-
contig_1	Pyrodigal	gene	161187	161792	.	+	.	ID=GCA000153685_00145_gene;locus_tag=GCA000153685_00145
contig_1	Pyrodigal	CDS	161187	161792	.	+	0	ID=GCA000153685_00145;Name=GCN5-related N-acetyltransferase;locus_tag=GCA000153685_00145;product=GCN5-related N-acetyltransferase;Parent=GCA000153685_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400924.1,SO:0001217,UniParc:UPI00000D6047,UniRef:UniRef100_P96810,UniRef:UniRef50_A0A0I9VFZ1,UniRef:UniRef90_P96810
contig_1	Pyrodigal	gene	162089	162991	.	+	.	ID=GCA000153685_00146_gene;locus_tag=GCA000153685_00146
contig_1	Pyrodigal	CDS	162089	162991	.	+	0	ID=GCA000153685_00146;Name=Alpha/beta hydrolase;locus_tag=GCA000153685_00146;product=Alpha/beta hydrolase;Parent=GCA000153685_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899827.1,SO:0001217,UniParc:UPI00000D5F76,UniRef:UniRef100_P96811,UniRef:UniRef50_A0A0T9MJX3,UniRef:UniRef90_A0A0T9MJX3
contig_1	Pyrodigal	gene	162962	163567	.	-	.	ID=GCA000153685_00147_gene;locus_tag=GCA000153685_00147
contig_1	Pyrodigal	CDS	162962	163567	.	-	0	ID=GCA000153685_00147;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_00147;product=putative transcriptional regulatory protein;Parent=GCA000153685_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400935.1,SO:0001217,UniParc:UPI00000D6056,UniRef:UniRef100_P96812,UniRef:UniRef50_P96812,UniRef:UniRef90_P96812
contig_1	Pyrodigal	gene	163684	165009	.	+	.	ID=GCA000153685_00148_gene;locus_tag=GCA000153685_00148;gene=cyp138
contig_1	Pyrodigal	CDS	163684	165009	.	+	0	ID=GCA000153685_00148;Name=Putative cytochrome P450 138;locus_tag=GCA000153685_00148;product=Putative cytochrome P450 138;Dbxref=GO:0004497,GO:0005506,GO:0016491,GO:0016705,GO:0020037;gene=cyp138;Parent=GCA000153685_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24192,RefSeq:WP_003400938.1,SO:0001217,UniParc:UPI0000126BB6,UniRef:UniRef100_P9WPM3,UniRef:UniRef50_P9WPM3,UniRef:UniRef90_P9WPM3;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	165030	165578	.	-	.	ID=GCA000153685_00149_gene;locus_tag=GCA000153685_00149;gene=msrA
contig_1	Pyrodigal	CDS	165030	165578	.	-	0	ID=GCA000153685_00149;Name=Peptide methionine sulfoxide reductase MsrA;locus_tag=GCA000153685_00149;product=Peptide methionine sulfoxide reductase MsrA;Dbxref=GO:0005737,GO:0005829,GO:0006979,GO:0008113,GO:0033744,GO:0034599,GO:0036211,GO:0036456,GO:0051409,GO:0141082;gene=msrA;Parent=GCA000153685_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400942.1,SO:0001217,UniParc:UPI000012F659,UniRef:UniRef100_P9WJM5,UniRef:UniRef50_P9WJM5,UniRef:UniRef90_P9WJM5;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	165641	166144	.	+	.	ID=GCA000153685_00150_gene;locus_tag=GCA000153685_00150
contig_1	Pyrodigal	CDS	165641	166144	.	+	0	ID=GCA000153685_00150;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_00150;product=SnoaL-like domain-containing protein;Parent=GCA000153685_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400945.1,SO:0001217,UniParc:UPI00000D1131,UniRef:UniRef100_P96815,UniRef:UniRef50_P96815,UniRef:UniRef90_P96815
contig_1	Pyrodigal	gene	166145	167167	.	+	.	ID=GCA000153685_00151_gene;locus_tag=GCA000153685_00151
contig_1	Pyrodigal	CDS	166145	167167	.	+	0	ID=GCA000153685_00151;Name=Oxidoreductase;locus_tag=GCA000153685_00151;product=Oxidoreductase;Parent=GCA000153685_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400947.1,SO:0001217,UniParc:UPI00000D5FB1,UniRef:UniRef100_P96816,UniRef:UniRef50_A0A3S4VTU1,UniRef:UniRef90_A0A5R1ZF86
contig_1	Pyrodigal	gene	167228	167608	.	+	.	ID=GCA000153685_00152_gene;locus_tag=GCA000153685_00152
contig_1	Pyrodigal	CDS	167228	167608	.	+	0	ID=GCA000153685_00152;Name=Conserved protein;locus_tag=GCA000153685_00152;product=Conserved protein;Parent=GCA000153685_00152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400949.1,SO:0001217,UniParc:UPI00000D1019,UniRef:UniRef100_P96817,UniRef:UniRef50_A0A1A9GRJ5,UniRef:UniRef90_P96817
contig_1	Pyrodigal	gene	167589	167999	.	-	.	ID=GCA000153685_00153_gene;locus_tag=GCA000153685_00153
contig_1	Pyrodigal	CDS	167589	167999	.	-	0	ID=GCA000153685_00153;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_00153;product=SnoaL-like domain-containing protein;Parent=GCA000153685_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400951.1,SO:0001217,UniParc:UPI00000D0F73,UniRef:UniRef100_P96818,UniRef:UniRef50_A0A1A3D3Q3,UniRef:UniRef90_P96818
contig_1	Pyrodigal	gene	168029	168955	.	+	.	ID=GCA000153685_00154_gene;locus_tag=GCA000153685_00154
contig_1	Pyrodigal	CDS	168029	168955	.	+	0	ID=GCA000153685_00154;Name=DNA-3-methyladenine glycosylase II;locus_tag=GCA000153685_00154;product=DNA-3-methyladenine glycosylase II;Parent=GCA000153685_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400956.1,SO:0001217,UniParc:UPI00000D1039,UniRef:UniRef100_P96819,UniRef:UniRef50_A0A143QJ67,UniRef:UniRef90_P96819
contig_1	Pyrodigal	gene	169022	170500	.	-	.	ID=GCA000153685_00155_gene;locus_tag=GCA000153685_00155
contig_1	Pyrodigal	CDS	169022	170500	.	-	0	ID=GCA000153685_00155;Name=Transmembrane protein;locus_tag=GCA000153685_00155;product=Transmembrane protein;Parent=GCA000153685_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900813.1,SO:0001217,UniParc:UPI00012781E3,UniRef:UniRef100_UPI00012781E3,UniRef:UniRef50_A0A7I7LZ53,UniRef:UniRef90_A0A654ZVM0
contig_1	Pyrodigal	gene	170602	171444	.	+	.	ID=GCA000153685_00156_gene;locus_tag=GCA000153685_00156;gene=tetR
contig_1	Pyrodigal	CDS	170602	171444	.	+	0	ID=GCA000153685_00156;Name=TetR family transcriptional regulator;locus_tag=GCA000153685_00156;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000153685_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400961.1,SO:0001217,UniParc:UPI00000D5FF9,UniRef:UniRef100_A5TYL9,UniRef:UniRef50_A0A051TXG7,UniRef:UniRef90_A0A0T9E5M2
contig_1	Pyrodigal	gene	171533	172486	.	+	.	ID=GCA000153685_00157_gene;locus_tag=GCA000153685_00157
contig_1	Pyrodigal	CDS	171533	172486	.	+	0	ID=GCA000153685_00157;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_0152;locus_tag=GCA000153685_00157;product=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_0152;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899829.1,SO:0001217,UniParc:UPI00000D0F6B,UniRef:UniRef100_A0A679LAF3,UniRef:UniRef50_P9WFJ1,UniRef:UniRef90_P9WFJ1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	172529	173461	.	+	.	ID=GCA000153685_00158_gene;locus_tag=GCA000153685_00158
contig_1	Pyrodigal	CDS	172529	173461	.	+	0	ID=GCA000153685_00158;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_0182;locus_tag=GCA000153685_00158;product=Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_0182;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900814.1,SO:0001217,UniParc:UPI000016520C,UniRef:UniRef100_P9WFJ3,UniRef:UniRef50_P9WFJ3,UniRef:UniRef90_P9WFJ3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	173604	175076	.	+	.	ID=GCA000153685_00159_gene;locus_tag=GCA000153685_00159
contig_1	Pyrodigal	CDS	173604	175076	.	+	0	ID=GCA000153685_00159;Name=Aldehyde dehydrogenase;locus_tag=GCA000153685_00159;product=Aldehyde dehydrogenase;Parent=GCA000153685_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003217C29,UniRef:UniRef100_P96824,UniRef:UniRef50_P96824,UniRef:UniRef90_P96824
contig_1	Pyrodigal	gene	175151	176011	.	+	.	ID=GCA000153685_00160_gene;locus_tag=GCA000153685_00160;gene=fabG
contig_1	Pyrodigal	CDS	175151	176011	.	+	0	ID=GCA000153685_00160;Name=Putative short-chain type dehydrogenase/reductase Rv0148;locus_tag=GCA000153685_00160;product=Putative short-chain type dehydrogenase/reductase Rv0148;Dbxref=GO:0003857,GO:0004300,GO:0005886,GO:0006635,GO:0009274,GO:0070490;gene=fabG;Parent=GCA000153685_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_003400979.1,SO:0001217,UniParc:UPI000016520D,UniRef:UniRef100_P96825,UniRef:UniRef50_P96825,UniRef:UniRef90_P96825;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	176018	176986	.	+	.	ID=GCA000153685_00161_gene;locus_tag=GCA000153685_00161
contig_1	Pyrodigal	CDS	176018	176986	.	+	0	ID=GCA000153685_00161;Name=putative quinone oxidoreductase (NADPH:quinone oxidoreductase) (Zeta-crystallin);locus_tag=GCA000153685_00161;product=putative quinone oxidoreductase (NADPH:quinone oxidoreductase) (Zeta-crystallin);Parent=GCA000153685_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400985.1,SO:0001217,UniParc:UPI00000D5F1C,UniRef:UniRef100_P96826,UniRef:UniRef50_A0A0J6VEG5,UniRef:UniRef90_P96826
contig_1	Pyrodigal	gene	176983	177270	.	-	.	ID=GCA000153685_00162_gene;locus_tag=GCA000153685_00162
contig_1	Pyrodigal	CDS	176983	177270	.	-	0	ID=GCA000153685_00162;Name=PE family protein;locus_tag=GCA000153685_00162;product=PE family protein;Parent=GCA000153685_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400989.1,SO:0001217,UniParc:UPI00000D11AA,UniRef:UniRef100_P96827,UniRef:UniRef50_P96827,UniRef:UniRef90_P96827
contig_1	Pyrodigal	gene	177861	179627	.	-	.	ID=GCA000153685_00163_gene;locus_tag=GCA000153685_00163
contig_1	Pyrodigal	CDS	177861	179627	.	-	0	ID=GCA000153685_00163;Name=PE family protein PE1;locus_tag=GCA000153685_00163;product=PE family protein PE1;Parent=GCA000153685_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B35,UniRef:UniRef100_Q8VKQ9,UniRef:UniRef50_Q79G06,UniRef:UniRef90_Q79G06
contig_1	Pyrodigal	gene	179637	181109	.	-	.	ID=GCA000153685_00164_gene;locus_tag=GCA000153685_00164
contig_1	Pyrodigal	CDS	179637	181109	.	-	0	ID=GCA000153685_00164;Name=PE family protein PE2;locus_tag=GCA000153685_00164;product=PE family protein PE2;Parent=GCA000153685_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911093.1,SO:0001217,UniParc:UPI00005F63EF,UniRef:UniRef100_A0A0H3L529,UniRef:UniRef50_Q79G05,UniRef:UniRef90_Q79G05
contig_1	Pyrodigal	gene	181123	181347	.	-	.	ID=GCA000153685_00165_gene;locus_tag=GCA000153685_00165
contig_1	Pyrodigal	CDS	181123	181347	.	-	0	ID=GCA000153685_00165;Name=PE-PGRS family protein;locus_tag=GCA000153685_00165;product=PE-PGRS family protein;Parent=GCA000153685_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401006.1,SO:0001217,UniParc:UPI00005EE377,UniRef:UniRef100_A0A0H3LBI5,UniRef:UniRef50_A0A0H3LBI5,UniRef:UniRef90_A0A0H3LBI5
contig_1	Pyrodigal	gene	181473	182303	.	-	.	ID=GCA000153685_00166_gene;locus_tag=GCA000153685_00166;gene=ptbB
contig_1	Pyrodigal	CDS	181473	182303	.	-	0	ID=GCA000153685_00166;Name=tyrosine-protein phosphatase PtbB;locus_tag=GCA000153685_00166;product=tyrosine-protein phosphatase PtbB;Dbxref=GO:0004726,GO:0005576,GO:0016020,GO:0016791,GO:0017018,GO:0020002,GO:0030430,GO:0030946,GO:0033192,GO:0034054,GO:0043130,GO:0043812,GO:0052036,GO:0106019,GO:0140791,GO:0140793,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990439;gene=ptbB;Parent=GCA000153685_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401010,RefSeq:WP_003401010.1,SO:0001217,UniParc:UPI000004422E,UniRef:UniRef100_I6WXK4,UniRef:UniRef50_I6WXK4,UniRef:UniRef90_I6WXK4;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	182305	183516	.	-	.	ID=GCA000153685_00167_gene;locus_tag=GCA000153685_00167;gene=fadE2
contig_1	Pyrodigal	CDS	182305	183516	.	-	0	ID=GCA000153685_00167;Name=putative acyl-CoA dehydrogenase FadE2;locus_tag=GCA000153685_00167;product=putative acyl-CoA dehydrogenase FadE2;Dbxref=GO:0003995,GO:0005737,GO:0005886,GO:0033539,GO:0050660;gene=fadE2;Parent=GCA000153685_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401015.1,SO:0001217,UniParc:UPI000016520F,UniRef:UniRef100_P96831,UniRef:UniRef50_P96831,UniRef:UniRef90_P96831;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	183940	185040	.	+	.	ID=GCA000153685_00168_gene;locus_tag=GCA000153685_00168;gene=pntA
contig_1	Pyrodigal	CDS	183940	185040	.	+	0	ID=GCA000153685_00168;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;locus_tag=GCA000153685_00168;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;Dbxref=GO:1902600;gene=pntA;Parent=GCA000153685_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3288,RefSeq:WP_003401026.1,SO:0001217,UniParc:UPI00000C1579,UniRef:UniRef100_P96832,UniRef:UniRef50_A0A3M1GXF0,UniRef:UniRef90_D5PAJ4;ec_number=7.1.1.1
contig_1	Pyrodigal	gene	185041	185373	.	+	.	ID=GCA000153685_00169_gene;locus_tag=GCA000153685_00169
contig_1	Pyrodigal	CDS	185041	185373	.	+	0	ID=GCA000153685_00169;Name=proton-translocating NAD(P)(+) transhydrogenase;locus_tag=GCA000153685_00169;product=proton-translocating NAD(P)(+) transhydrogenase;Parent=GCA000153685_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401030.1,SO:0001217,UniParc:UPI00000C14BF,UniRef:UniRef100_P96833,UniRef:UniRef50_A0A6N7CUF6,UniRef:UniRef90_A0A679LB38
contig_1	Pyrodigal	gene	185370	186797	.	+	.	ID=GCA000153685_00170_gene;locus_tag=GCA000153685_00170
contig_1	Pyrodigal	CDS	185370	186797	.	+	0	ID=GCA000153685_00170;Name=NAD(P) transhydrogenase subunit beta;locus_tag=GCA000153685_00170;product=NAD(P) transhydrogenase subunit beta;Parent=GCA000153685_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899835.1,SO:0001217,UniParc:UPI00000D102F,UniRef:UniRef100_P96834,UniRef:UniRef50_A0A2C9DBW3,UniRef:UniRef90_P96834
contig_1	Pyrodigal	gene	186813	186938	.	-	.	ID=GCA000153685_00171_gene;locus_tag=GCA000153685_00171;gene=tetR
contig_1	Pyrodigal	CDS	186813	186938	.	-	0	ID=GCA000153685_00171;Name=TetR family transcriptional regulator;locus_tag=GCA000153685_00171;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000153685_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A2E1,UniRef:UniRef100_I6WXK8,UniRef:UniRef50_R4LYC1,UniRef:UniRef90_R4LYC1
contig_1	Pyrodigal	gene	187103	187747	.	+	.	ID=GCA000153685_00172_gene;locus_tag=GCA000153685_00172
contig_1	Pyrodigal	CDS	187103	187747	.	+	0	ID=GCA000153685_00172;Name=TetR/AcrR family transcriptional regulator;locus_tag=GCA000153685_00172;product=TetR/AcrR family transcriptional regulator;Parent=GCA000153685_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900816.1,SO:0001217,UniParc:UPI00012781E4,UniRef:UniRef100_UPI00012781E4,UniRef:UniRef50_A0A4R8RYU5,UniRef:UniRef90_UPI0010087760
contig_1	Pyrodigal	gene	187751	189157	.	-	.	ID=GCA000153685_00173_gene;locus_tag=GCA000153685_00173;gene=pE3
contig_1	Pyrodigal	CDS	187751	189157	.	-	0	ID=GCA000153685_00173;Name=PE family protein PE3;locus_tag=GCA000153685_00173;product=PE family protein PE3;Dbxref=GO:0005576;gene=pE3;Parent=GCA000153685_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401047.1,SO:0001217,UniParc:UPI00005EE378,UniRef:UniRef100_A0A0H3L8Q0,UniRef:UniRef50_Q79G04,UniRef:UniRef90_Q79G04
contig_1	Pyrodigal	gene	189249	190757	.	-	.	ID=GCA000153685_00174_gene;locus_tag=GCA000153685_00174
contig_1	Pyrodigal	CDS	189249	190757	.	-	0	ID=GCA000153685_00174;Name=PE family protein PE4;locus_tag=GCA000153685_00174;product=PE family protein PE4;Parent=GCA000153685_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900817.1,SO:0001217,UniParc:UPI00000D110C,UniRef:UniRef100_L7N661,UniRef:UniRef50_Q79G04,UniRef:UniRef90_L7N661
contig_1	Pyrodigal	gene	190901	192274	.	+	.	ID=GCA000153685_00175_gene;locus_tag=GCA000153685_00175
contig_1	Pyrodigal	CDS	190901	192274	.	+	0	ID=GCA000153685_00175;Name=putative oxidoreductase;locus_tag=GCA000153685_00175;product=putative oxidoreductase;Parent=GCA000153685_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A498QLJ7,UniRef:UniRef90_O07406
contig_1	Pyrodigal	gene	192302	193420	.	-	.	ID=GCA000153685_00176_gene;locus_tag=GCA000153685_00176
contig_1	Pyrodigal	CDS	192302	193420	.	-	0	ID=GCA000153685_00176;Name=Zinc-type alcohol dehydrogenase subunit E;locus_tag=GCA000153685_00176;product=Zinc-type alcohol dehydrogenase subunit E;Parent=GCA000153685_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901814.1,SO:0001217,UniParc:UPI00005EE379,UniRef:UniRef100_A5TYN7,UniRef:UniRef50_A0A376CUD8,UniRef:UniRef90_A0A655A1Y9
contig_1	Pyrodigal	gene	193435	193890	.	+	.	ID=GCA000153685_00177_gene;locus_tag=GCA000153685_00177
contig_1	Pyrodigal	CDS	193435	193890	.	+	0	ID=GCA000153685_00177;Name=Conserved protein;locus_tag=GCA000153685_00177;product=Conserved protein;Parent=GCA000153685_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07107,RefSeq:WP_003401060.1,SO:0001217,UniParc:UPI00000CCB31,UniRef:UniRef100_O07408,UniRef:UniRef50_B2HLX4,UniRef:UniRef90_O07408;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	193989	194429	.	+	.	ID=GCA000153685_00178_gene;locus_tag=GCA000153685_00178
contig_1	Pyrodigal	CDS	193989	194429	.	+	0	ID=GCA000153685_00178;Name=Coenzyme Q-binding protein COQ10 START domain-containing protein;locus_tag=GCA000153685_00178;product=Coenzyme Q-binding protein COQ10 START domain-containing protein;Parent=GCA000153685_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917895.1,SO:0001217,UniParc:UPI000003326B,UniRef:UniRef100_L7N657,UniRef:UniRef50_Q7APS8,UniRef:UniRef90_R4LTZ3
contig_1	Pyrodigal	gene	194462	195256	.	-	.	ID=GCA000153685_00179_gene;locus_tag=GCA000153685_00179
contig_1	Pyrodigal	CDS	194462	195256	.	-	0	ID=GCA000153685_00179;Name=Transcriptional regulator Mce1R;locus_tag=GCA000153685_00179;product=Transcriptional regulator Mce1R;Parent=GCA000153685_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D3ACE,UniRef:UniRef100_A5TYP0,UniRef:UniRef50_A0A2I7W2N7,UniRef:UniRef90_A0A2I7W2N7
contig_1	Pyrodigal	gene	195311	196975	.	+	.	ID=GCA000153685_00180_gene;locus_tag=GCA000153685_00180;gene=fadD5
contig_1	Pyrodigal	CDS	195311	196975	.	+	0	ID=GCA000153685_00180;Name=fatty-acid--CoA ligase FadD5;locus_tag=GCA000153685_00180;product=fatty-acid--CoA ligase FadD5;gene=fadD5;Parent=GCA000153685_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899837,RefSeq:WP_003899837.1,SO:0001217,UniParc:UPI00000D4F4F,UniRef:UniRef100_A5TYP1,UniRef:UniRef50_A0A3S4RI76,UniRef:UniRef90_A0A655D8S5
contig_1	Pyrodigal	gene	197179	197976	.	+	.	ID=GCA000153685_00181_gene;locus_tag=GCA000153685_00181;gene=mlaE
contig_1	Pyrodigal	CDS	197179	197976	.	+	0	ID=GCA000153685_00181;Name=Conserved integral membrane protein YrbE1A;locus_tag=GCA000153685_00181;product=Conserved integral membrane protein YrbE1A;gene=mlaE;Parent=GCA000153685_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_003401074.1,SO:0001217,UniParc:UPI00000D10B7,UniRef:UniRef100_O07412,UniRef:UniRef50_O07412,UniRef:UniRef90_O07412
contig_1	Pyrodigal	gene	197978	198847	.	+	.	ID=GCA000153685_00182_gene;locus_tag=GCA000153685_00182
contig_1	Pyrodigal	CDS	197978	198847	.	+	0	ID=GCA000153685_00182;Name=Conserved integral membrane protein YrbE1B;locus_tag=GCA000153685_00182;product=Conserved integral membrane protein YrbE1B;Parent=GCA000153685_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02066,RefSeq:WP_003401077.1,SO:0001217,UniParc:UPI000004B706,UniRef:UniRef100_L0T2Q9,UniRef:UniRef50_L0T2Q9,UniRef:UniRef90_L0T2Q9
contig_1	Pyrodigal	gene	198852	200216	.	+	.	ID=GCA000153685_00183_gene;locus_tag=GCA000153685_00183
contig_1	Pyrodigal	CDS	198852	200216	.	+	0	ID=GCA000153685_00183;Name=Mce-family protein Mce1A;locus_tag=GCA000153685_00183;product=Mce-family protein Mce1A;Parent=GCA000153685_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899838.1,SO:0001217,UniParc:UPI000004B707,UniRef:UniRef100_Q79FZ9,UniRef:UniRef50_Q79FZ9,UniRef:UniRef90_Q79FZ9
contig_1	Pyrodigal	gene	200213	201253	.	+	.	ID=GCA000153685_00184_gene;locus_tag=GCA000153685_00184
contig_1	Pyrodigal	CDS	200213	201253	.	+	0	ID=GCA000153685_00184;Name=Mce-family protein Mce1B;locus_tag=GCA000153685_00184;product=Mce-family protein Mce1B;Parent=GCA000153685_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899839.1,SO:0001217,UniParc:UPI000004B708,UniRef:UniRef100_O07414,UniRef:UniRef50_O07414,UniRef:UniRef90_O07414
contig_1	Pyrodigal	gene	201250	202797	.	+	.	ID=GCA000153685_00185_gene;locus_tag=GCA000153685_00185
contig_1	Pyrodigal	CDS	201250	202797	.	+	0	ID=GCA000153685_00185;Name=Mce-family protein Mce1C;locus_tag=GCA000153685_00185;product=Mce-family protein Mce1C;Parent=GCA000153685_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901818.1,SO:0001217,UniParc:UPI000004B709,UniRef:UniRef100_O07415,UniRef:UniRef50_O07415,UniRef:UniRef90_O07415
contig_1	Pyrodigal	gene	202794	204386	.	+	.	ID=GCA000153685_00186_gene;locus_tag=GCA000153685_00186
contig_1	Pyrodigal	CDS	202794	204386	.	+	0	ID=GCA000153685_00186;Name=Mce-family protein Mce1D;locus_tag=GCA000153685_00186;product=Mce-family protein Mce1D;Parent=GCA000153685_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401084.1,SO:0001217,UniParc:UPI00000D5F8D,UniRef:UniRef100_O07416,UniRef:UniRef50_O07416,UniRef:UniRef90_O07416
contig_1	Pyrodigal	gene	204383	205555	.	+	.	ID=GCA000153685_00187_gene;locus_tag=GCA000153685_00187;gene=lprK
contig_1	Pyrodigal	CDS	204383	205555	.	+	0	ID=GCA000153685_00187;Name=putative Mce-family lipoprotein LprK (Mce-family lipoprotein Mce1E);locus_tag=GCA000153685_00187;product=putative Mce-family lipoprotein LprK (Mce-family lipoprotein Mce1E);gene=lprK;Parent=GCA000153685_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899841.1,SO:0001217,UniParc:UPI000004B70B,UniRef:UniRef100_O07417,UniRef:UniRef50_O07417,UniRef:UniRef90_O07417
contig_1	Pyrodigal	gene	205549	207096	.	+	.	ID=GCA000153685_00188_gene;locus_tag=GCA000153685_00188
contig_1	Pyrodigal	CDS	205549	207096	.	+	0	ID=GCA000153685_00188;Name=Mce-family protein Mce1F;locus_tag=GCA000153685_00188;product=Mce-family protein Mce1F;Parent=GCA000153685_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401091.1,SO:0001217,UniParc:UPI00000D2B3A,UniRef:UniRef100_A0A679LAG8,UniRef:UniRef50_L0T2W6,UniRef:UniRef90_L0T2W6
contig_1	Pyrodigal	gene	207066	207773	.	+	.	ID=GCA000153685_00189_gene;locus_tag=GCA000153685_00189
contig_1	Pyrodigal	CDS	207066	207773	.	+	0	ID=GCA000153685_00189;Name=Mce associated membrane protein;locus_tag=GCA000153685_00189;product=Mce associated membrane protein;Parent=GCA000153685_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,SO:0001217,UniParc:UPI00005F63F3,UniRef:UniRef100_A0A0E8UHZ5,UniRef:UniRef50_Q8VKQ3,UniRef:UniRef90_Q8VKQ3
contig_1	Pyrodigal	gene	207770	208738	.	+	.	ID=GCA000153685_00190_gene;locus_tag=GCA000153685_00190
contig_1	Pyrodigal	CDS	207770	208738	.	+	0	ID=GCA000153685_00190;Name=Mce associated transmembrane protein;locus_tag=GCA000153685_00190;product=Mce associated transmembrane protein;Parent=GCA000153685_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899843.1,SO:0001217,UniParc:UPI00000CCB32,UniRef:UniRef100_A0A0H3LBK7,UniRef:UniRef50_A0A960CGY6,UniRef:UniRef90_A0A0H3LBK7
contig_1	Pyrodigal	gene	208735	209289	.	+	.	ID=GCA000153685_00191_gene;locus_tag=GCA000153685_00191
contig_1	Pyrodigal	CDS	208735	209289	.	+	0	ID=GCA000153685_00191;Name=mce1 operon protein;locus_tag=GCA000153685_00191;product=mce1 operon protein;Parent=GCA000153685_00191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401099,KEGG:K18481,RefSeq:WP_003401099.1,SO:0001217,UniParc:UPI00000D10F4,UniRef:UniRef100_A5TYQ2,UniRef:UniRef50_A0QNS0,UniRef:UniRef90_A5TYQ2
contig_1	Pyrodigal	gene	209256	209990	.	+	.	ID=GCA000153685_00192_gene;locus_tag=GCA000153685_00192
contig_1	Pyrodigal	CDS	209256	209990	.	+	0	ID=GCA000153685_00192;Name=Conserved Mce associated membrane protein;locus_tag=GCA000153685_00192;product=Conserved Mce associated membrane protein;Parent=GCA000153685_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003899844.1,SO:0001217,UniParc:UPI00000D10B1,UniRef:UniRef100_A5TYQ3,UniRef:UniRef50_D5PAP0,UniRef:UniRef90_A5TYQ3
contig_1	Pyrodigal	gene	210021	211130	.	-	.	ID=GCA000153685_00193_gene;locus_tag=GCA000153685_00193
contig_1	Pyrodigal	CDS	210021	211130	.	-	0	ID=GCA000153685_00193;Name=Phosphodiester glycosidase domain-containing protein;locus_tag=GCA000153685_00193;product=Phosphodiester glycosidase domain-containing protein;Parent=GCA000153685_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899845.1,SO:0001217,UniParc:UPI00000D0FE3,UniRef:UniRef100_O07423,UniRef:UniRef50_A0A7I7QAL5,UniRef:UniRef90_R4LRF1
contig_1	Pyrodigal	gene	211210	212568	.	-	.	ID=GCA000153685_00194_gene;locus_tag=GCA000153685_00194
contig_1	Pyrodigal	CDS	211210	212568	.	-	0	ID=GCA000153685_00194;Name=Conserved transmembrane protein;locus_tag=GCA000153685_00194;product=Conserved transmembrane protein;Parent=GCA000153685_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899846.1,SO:0001217,UniParc:UPI00000D10E5,UniRef:UniRef100_A5TYQ5,UniRef:UniRef50_A0A375YUQ8,UniRef:UniRef90_A5TYQ5
contig_1	Pyrodigal	gene	212595	213329	.	-	.	ID=GCA000153685_00195_gene;locus_tag=GCA000153685_00195
contig_1	Pyrodigal	CDS	212595	213329	.	-	0	ID=GCA000153685_00195;Name=Putative quercetin 2%2C3-dioxygenase Mb0187c;locus_tag=GCA000153685_00195;product=Putative quercetin 2%2C3-dioxygenase Mb0187c;Dbxref=GO:0008127,GO:0046872;Parent=GCA000153685_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401107.1,SO:0001217,UniParc:UPI00001393FD,UniRef:UniRef100_P9WI85,UniRef:UniRef50_P9WI85,UniRef:UniRef90_P9WI85;ec_number=1.13.11.24
contig_1	Pyrodigal	gene	213346	214344	.	-	.	ID=GCA000153685_00196_gene;locus_tag=GCA000153685_00196;gene=sigG
contig_1	Pyrodigal	CDS	213346	214344	.	-	0	ID=GCA000153685_00196;Name=ECF RNA polymerase sigma factor SigG;locus_tag=GCA000153685_00196;product=ECF RNA polymerase sigma factor SigG;Dbxref=GO:0001666,GO:0003677,GO:0005886,GO:0006352,GO:0006355,GO:0009415,GO:0016987;gene=sigG;Parent=GCA000153685_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE37F,UniRef:UniRef100_A0A0H3L4U3,UniRef:UniRef50_P9WGG5,UniRef:UniRef90_P9WGG5
contig_1	Pyrodigal	gene	214349	215245	.	+	.	ID=GCA000153685_00197_gene;locus_tag=GCA000153685_00197
contig_1	Pyrodigal	CDS	214349	215245	.	+	0	ID=GCA000153685_00197;Name=monoacylglycerol lipase;locus_tag=GCA000153685_00197;product=monoacylglycerol lipase;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0016020,GO:0016298,GO:0046503,GO:0047372,GO:0052151;Parent=GCA000153685_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401112,BlastRules:WP_011726751,SO:0001217,UniParc:UPI0004E42418,UniRef:UniRef100_O07427,UniRef:UniRef50_O07427,UniRef:UniRef90_O07427;ec_number=3.1.1.23
contig_1	Pyrodigal	gene	215287	216036	.	+	.	ID=GCA000153685_00198_gene;locus_tag=GCA000153685_00198
contig_1	Pyrodigal	CDS	215287	216036	.	+	0	ID=GCA000153685_00198;Name=DUF2786 domain-containing protein;locus_tag=GCA000153685_00198;product=DUF2786 domain-containing protein;Parent=GCA000153685_00198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401116.1,SO:0001217,UniParc:UPI00000D1073,UniRef:UniRef100_O07428,UniRef:UniRef50_G8RIZ0,UniRef:UniRef90_O07428
contig_1	Pyrodigal	gene	216033	216542	.	+	.	ID=GCA000153685_00199_gene;locus_tag=GCA000153685_00199
contig_1	Pyrodigal	CDS	216033	216542	.	+	0	ID=GCA000153685_00199;Name=TIGR04338 family metallohydrolase;locus_tag=GCA000153685_00199;product=TIGR04338 family metallohydrolase;Parent=GCA000153685_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401120.1,SO:0001217,UniParc:UPI00000D10B3,UniRef:UniRef100_O07429,UniRef:UniRef50_O07429,UniRef:UniRef90_O07429
contig_1	Pyrodigal	gene	216587	218662	.	+	.	ID=GCA000153685_00200_gene;locus_tag=GCA000153685_00200;gene=bglS
contig_1	Pyrodigal	CDS	216587	218662	.	+	0	ID=GCA000153685_00200;Name=putative beta-glucosidase bglS;locus_tag=GCA000153685_00200;product=putative beta-glucosidase bglS;gene=bglS;Parent=GCA000153685_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05349,RefSeq:WP_003401122.1,SO:0001217,UniParc:UPI00000D5FAC,UniRef:UniRef100_A5TYR1,UniRef:UniRef50_A0A6J5DWE6,UniRef:UniRef90_A0A0H3M9Z7;ec_number=3.2.1.21
contig_1	Pyrodigal	gene	218708	218854	.	-	.	ID=GCA000153685_00201_gene;locus_tag=GCA000153685_00201;gene=mymT
contig_1	Pyrodigal	CDS	218708	218854	.	-	0	ID=GCA000153685_00201;Name=metallothionein MymT;locus_tag=GCA000153685_00201;product=metallothionein MymT;Dbxref=GO:0005507,GO:0008270,GO:0010043,GO:0010045,GO:0032025,GO:0046686,GO:0046688,GO:0097578;gene=mymT;Parent=GCA000153685_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886068,BlastRules:WP_019737964,KEGG:K21609,SO:0001217,UniParc:UPI000169A31A,UniRef:UniRef100_P9WK09,UniRef:UniRef50_P9WK09,UniRef:UniRef90_P9WK09
contig_1	Pyrodigal	gene	219029	219685	.	+	.	ID=GCA000153685_00202_gene;locus_tag=GCA000153685_00202
contig_1	Pyrodigal	CDS	219029	219685	.	+	0	ID=GCA000153685_00202;Name=Catechol O-methyltransferase;locus_tag=GCA000153685_00202;product=Catechol O-methyltransferase;Dbxref=GO:0005886,GO:0008757,GO:0016206,GO:0032259,GO:0046872;Parent=GCA000153685_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000164F3F,UniRef:UniRef100_A0A0H3L4U8,UniRef:UniRef50_O07431,UniRef:UniRef90_O07431;ec_number=2.1.1.6
contig_1	Pyrodigal	gene	219804	220235	.	+	.	ID=GCA000153685_00203_gene;locus_tag=GCA000153685_00203
contig_1	Pyrodigal	CDS	219804	220235	.	+	0	ID=GCA000153685_00203;Name=Transmembrane protein;locus_tag=GCA000153685_00203;product=Transmembrane protein;Parent=GCA000153685_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401141.1,SO:0001217,UniParc:UPI00000D0F70,UniRef:UniRef100_A5TYR3,UniRef:UniRef50_A0A1E3TLX8,UniRef:UniRef90_A0A1X2LXR8
contig_1	Pyrodigal	gene	220314	222041	.	-	.	ID=GCA000153685_00204_gene;locus_tag=GCA000153685_00204;gene=ilvD
contig_1	Pyrodigal	CDS	220314	222041	.	-	0	ID=GCA000153685_00204;Name=dihydroxy-acid dehydratase;locus_tag=GCA000153685_00204;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0009082,GO:0009097,GO:0009099,GO:0051536,GO:0051537;gene=ilvD;Parent=GCA000153685_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_003900824.1,SO:0001217,UniParc:UPI000012D582,UniRef:UniRef100_P9WKJ5,UniRef:UniRef50_P9WKJ5,UniRef:UniRef90_P9WKJ5;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	222189	222479	.	+	.	ID=GCA000153685_00205_gene;locus_tag=GCA000153685_00205;gene=ricR
contig_1	Pyrodigal	CDS	222189	222479	.	+	0	ID=GCA000153685_00205;Name=Copper-sensing transcriptional repressor RicR;locus_tag=GCA000153685_00205;product=Copper-sensing transcriptional repressor RicR;Dbxref=GO:0000976,GO:0001217,GO:0005737,GO:0032993,GO:0045892,GO:0046688,GO:0046872;gene=ricR;Parent=GCA000153685_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21600,RefSeq:WP_003401147.1,SO:0001217,UniParc:UPI00000D114C,UniRef:UniRef100_O07434,UniRef:UniRef50_O07434,UniRef:UniRef90_O07434
contig_1	Pyrodigal	gene	222607	223848	.	+	.	ID=GCA000153685_00206_gene;locus_tag=GCA000153685_00206
contig_1	Pyrodigal	CDS	222607	223848	.	+	0	ID=GCA000153685_00206;Name=Rv0191 family MFS efflux transporter;locus_tag=GCA000153685_00206;product=Rv0191 family MFS efflux transporter;Dbxref=GO:0005886,GO:0022857,GO:0046677,GO:0055085;Parent=GCA000153685_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401149,RefSeq:WP_003401149.1,SO:0001217,UniParc:UPI00000D4F51,UniRef:UniRef100_P9WJX7,UniRef:UniRef50_P9WJX7,UniRef:UniRef90_P9WJX7
contig_1	Pyrodigal	gene	223925	224227	.	+	.	ID=GCA000153685_00207_gene;locus_tag=GCA000153685_00207
contig_1	Pyrodigal	CDS	223925	224227	.	+	0	ID=GCA000153685_00207;Name=Conserved secreted protein;locus_tag=GCA000153685_00207;product=Conserved secreted protein;Parent=GCA000153685_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000022005D,UniRef:UniRef100_Q79FZ8,UniRef:UniRef50_Q79FZ8,UniRef:UniRef90_Q79FZ8
contig_1	Pyrodigal	gene	224218	224982	.	+	.	ID=GCA000153685_00208_gene;locus_tag=GCA000153685_00208
contig_1	Pyrodigal	CDS	224218	224982	.	+	0	ID=GCA000153685_00208;Name=L%2CD-TPase catalytic domain-containing protein;locus_tag=GCA000153685_00208;product=L%2CD-TPase catalytic domain-containing protein;Parent=GCA000153685_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE382,UniRef:UniRef100_A0A0E7TH76,UniRef:UniRef50_A0A101AP30,UniRef:UniRef90_A0A0H3L4V2
contig_1	Pyrodigal	gene	225042	226889	.	-	.	ID=GCA000153685_00209_gene;locus_tag=GCA000153685_00209
contig_1	Pyrodigal	CDS	225042	226889	.	-	0	ID=GCA000153685_00209;Name=hypothetical protein;locus_tag=GCA000153685_00209;product=hypothetical protein;Parent=GCA000153685_00209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899850.1,SO:0001217,UniParc:UPI0000EF47EE,UniRef:UniRef100_A0A0H3L4U5,UniRef:UniRef50_A0A1X2LY58,UniRef:UniRef90_O07437
contig_1	Pyrodigal	gene	227018	227137	.	+	.	ID=GCA000153685_00210_gene;locus_tag=GCA000153685_00210
contig_1	Pyrodigal	CDS	227018	227137	.	+	0	ID=GCA000153685_00210;Name=hypothetical protein;locus_tag=GCA000153685_00210;product=hypothetical protein;Parent=GCA000153685_00210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DD02A3,UniRef:UniRef100_A0A0H3L8S9,UniRef:UniRef50_A0A0H3L8S9,UniRef:UniRef90_A0A0H3L8S9
contig_1	Pyrodigal	gene	227196	230780	.	+	.	ID=GCA000153685_00211_gene;locus_tag=GCA000153685_00211;gene=msbA
contig_1	Pyrodigal	CDS	227196	230780	.	+	0	ID=GCA000153685_00211;Name=lipid A export permease/ATP-binding protein MsbA;locus_tag=GCA000153685_00211;product=lipid A export permease/ATP-binding protein MsbA;Dbxref=GO:0005319,GO:0005524,GO:0005886,GO:0006869,GO:0009274,GO:0015562,GO:0016020,GO:0016887,GO:0034040,GO:0046677,GO:0055085,GO:0140359,GO:1990961;gene=msbA;Parent=GCA000153685_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18894,RefSeq:WP_003899851.1,SO:0001217,UniParc:UPI0000EF47EF,UniRef:UniRef100_Q8VKP9,UniRef:UniRef50_O53645,UniRef:UniRef90_O53645;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	231085	231852	.	+	.	ID=GCA000153685_00212_gene;locus_tag=GCA000153685_00212;gene=luxR
contig_1	Pyrodigal	CDS	231085	231852	.	+	0	ID=GCA000153685_00212;Name=LuxR family transcriptional regulator;locus_tag=GCA000153685_00212;product=LuxR family transcriptional regulator;gene=luxR;Parent=GCA000153685_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A8E33E,UniRef:UniRef100_A0A0E8NKQ6,UniRef:UniRef50_A0A0E8NKQ6,UniRef:UniRef90_A0A0E8NKQ6
contig_1	Pyrodigal	gene	231965	232549	.	+	.	ID=GCA000153685_00213_gene;locus_tag=GCA000153685_00213
contig_1	Pyrodigal	CDS	231965	232549	.	+	0	ID=GCA000153685_00213;Name=putative HTH-type transcriptional regulator Rv0196;locus_tag=GCA000153685_00213;product=putative HTH-type transcriptional regulator Rv0196;Dbxref=GO:0003677,GO:0006355;Parent=GCA000153685_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401168.1,SO:0001217,UniParc:UPI00000D5FE7,UniRef:UniRef100_P9WME1,UniRef:UniRef50_P9WME1,UniRef:UniRef90_P9WME1
contig_1	Pyrodigal	gene	232549	234795	.	+	.	ID=GCA000153685_00214_gene;locus_tag=GCA000153685_00214
contig_1	Pyrodigal	CDS	232549	234795	.	+	0	ID=GCA000153685_00214;Name=putative oxidoreductase;locus_tag=GCA000153685_00214;product=putative oxidoreductase;Parent=GCA000153685_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913548.1,SO:0001217,UniParc:UPI0000F517C4,UniRef:UniRef100_A5TYS2,UniRef:UniRef50_A0A257H5E3,UniRef:UniRef90_L0T2Z1
contig_1	Pyrodigal	gene	234836	236827	.	-	.	ID=GCA000153685_00215_gene;locus_tag=GCA000153685_00215;gene=zmp1
contig_1	Pyrodigal	CDS	234836	236827	.	-	0	ID=GCA000153685_00215;Name=zinc metalloprotease Zmp1;locus_tag=GCA000153685_00215;product=zinc metalloprotease Zmp1;gene=zmp1;Parent=GCA000153685_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401172,RefSeq:WP_003401172.1,SO:0001217,UniParc:UPI00000D5F40,UniRef:UniRef100_A5TYS3,UniRef:UniRef50_A0A142YKT9,UniRef:UniRef90_A0A655AAF2
contig_1	Pyrodigal	gene	236870	237529	.	+	.	ID=GCA000153685_00216_gene;locus_tag=GCA000153685_00216
contig_1	Pyrodigal	CDS	236870	237529	.	+	0	ID=GCA000153685_00216;Name=Conserved membrane protein;locus_tag=GCA000153685_00216;product=Conserved membrane protein;Parent=GCA000153685_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003401181.1,SO:0001217,UniParc:UPI000003186D,UniRef:UniRef100_A5TYS4,UniRef:UniRef50_A5TYS4,UniRef:UniRef90_A5TYS4
contig_1	Pyrodigal	gene	237526	238215	.	+	.	ID=GCA000153685_00217_gene;locus_tag=GCA000153685_00217
contig_1	Pyrodigal	CDS	237526	238215	.	+	0	ID=GCA000153685_00217;Name=putative conserved transmembrane protein;locus_tag=GCA000153685_00217;product=putative conserved transmembrane protein;Parent=GCA000153685_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003401184.1,SO:0001217,UniParc:UPI00000D117C,UniRef:UniRef100_O53651,UniRef:UniRef50_A0A1A0MEQ2,UniRef:UniRef90_O53651
contig_1	Pyrodigal	gene	238212	238715	.	-	.	ID=GCA000153685_00218_gene;locus_tag=GCA000153685_00218
contig_1	Pyrodigal	CDS	238212	238715	.	-	0	ID=GCA000153685_00218;Name=Conserved protein;locus_tag=GCA000153685_00218;product=Conserved protein;Parent=GCA000153685_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401187.1,SO:0001217,UniParc:UPI00000CCB88,UniRef:UniRef100_O53652,UniRef:UniRef50_B2HMW9,UniRef:UniRef90_O53652
contig_1	Pyrodigal	gene	238712	241609	.	-	.	ID=GCA000153685_00219_gene;locus_tag=GCA000153685_00219;gene=mmpL11
contig_1	Pyrodigal	CDS	238712	241609	.	-	0	ID=GCA000153685_00219;Name=RND transporter MmpL11;locus_tag=GCA000153685_00219;product=RND transporter MmpL11;Dbxref=GO:0005829,GO:0005886,GO:0009274;gene=mmpL11;Parent=GCA000153685_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401190,SO:0001217,UniParc:UPI0001C54D70,UniRef:UniRef100_P9WJT9,UniRef:UniRef50_P9WJT9,UniRef:UniRef90_P9WJT9
contig_1	Pyrodigal	gene	241834	242244	.	+	.	ID=GCA000153685_00220_gene;locus_tag=GCA000153685_00220
contig_1	Pyrodigal	CDS	241834	242244	.	+	0	ID=GCA000153685_00220;Name=hemophore;locus_tag=GCA000153685_00220;product=hemophore;Dbxref=GO:0005576,GO:0015886,GO:0020037,GO:0046872;Parent=GCA000153685_00220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401194.1,SO:0001217,UniParc:UPI0000031791,UniRef:UniRef100_I6X8R5,UniRef:UniRef50_I6X8R5,UniRef:UniRef90_I6X8R5
contig_1	Pyrodigal	gene	242296	243579	.	-	.	ID=GCA000153685_00221_gene;locus_tag=GCA000153685_00221
contig_1	Pyrodigal	CDS	242296	243579	.	-	0	ID=GCA000153685_00221;Name=Transmembrane protein;locus_tag=GCA000153685_00221;product=Transmembrane protein;Parent=GCA000153685_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20468,SO:0001217,UniParc:UPI00001A8E97,UniRef:UniRef100_A5TYS9,UniRef:UniRef50_Q7DAA0,UniRef:UniRef90_Q7DAA0
contig_1	Pyrodigal	gene	243704	244807	.	+	.	ID=GCA000153685_00222_gene;locus_tag=GCA000153685_00222
contig_1	Pyrodigal	CDS	243704	244807	.	+	0	ID=GCA000153685_00222;Name=Putative transport protein Rv0205;locus_tag=GCA000153685_00222;product=Putative transport protein Rv0205;Dbxref=GO:0005886,GO:0055085;Parent=GCA000153685_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20469,RefSeq:WP_003899854.1,SO:0001217,UniParc:UPI0000139468,UniRef:UniRef100_P9WFM5,UniRef:UniRef50_P9WFM5,UniRef:UniRef90_P9WFM5
contig_1	Pyrodigal	gene	244804	247638	.	-	.	ID=GCA000153685_00223_gene;locus_tag=GCA000153685_00223;gene=mmpL3
contig_1	Pyrodigal	CDS	244804	247638	.	-	0	ID=GCA000153685_00223;Name=trehalose monomycolate RND transporter MmpL3;locus_tag=GCA000153685_00223;product=trehalose monomycolate RND transporter MmpL3;Dbxref=GO:0005886,GO:0006869,GO:0008429,GO:0019992,GO:0030428,GO:0035091,GO:0042391,GO:0042546,GO:0046677,GO:0051286,GO:0071555,GO:0071768,GO:1901611,GO:1901612;gene=mmpL3;Parent=GCA000153685_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899855,KEGG:K20470,RefSeq:WP_003899855.1,SO:0001217,UniParc:UPI000012F270,UniRef:UniRef100_P9WJV5,UniRef:UniRef50_A0QP27,UniRef:UniRef90_P9WJV5
contig_1	Pyrodigal	gene	247704	248438	.	-	.	ID=GCA000153685_00224_gene;locus_tag=GCA000153685_00224
contig_1	Pyrodigal	CDS	247704	248438	.	-	0	ID=GCA000153685_00224;Name=NYN domain-containing protein;locus_tag=GCA000153685_00224;product=NYN domain-containing protein;Parent=GCA000153685_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06860,SO:0001217,UniParc:UPI00000CCC08,UniRef:UniRef100_P96389,UniRef:UniRef50_G8RHZ9,UniRef:UniRef90_P96389
contig_1	Pyrodigal	gene	248435	249028	.	-	.	ID=GCA000153685_00225_gene;locus_tag=GCA000153685_00225;gene=trmB
contig_1	Pyrodigal	CDS	248435	249028	.	-	0	ID=GCA000153685_00225;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000153685_00225;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176;gene=trmB;Parent=GCA000153685_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE38A,UniRef:UniRef100_A0A0H3L591,UniRef:UniRef50_A0A1A3SVM6,UniRef:UniRef90_A0A0H3L591;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	249358	250443	.	+	.	ID=GCA000153685_00226_gene;locus_tag=GCA000153685_00226
contig_1	Pyrodigal	CDS	249358	250443	.	+	0	ID=GCA000153685_00226;Name=G domain-containing protein;locus_tag=GCA000153685_00226;product=G domain-containing protein;Parent=GCA000153685_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907228.1,SO:0001217,UniParc:UPI00000D0F8C,UniRef:UniRef100_P96391,UniRef:UniRef50_A0A1E3SZ88,UniRef:UniRef90_P96391
contig_1	Pyrodigal	gene	250440	251918	.	+	.	ID=GCA000153685_00227_gene;locus_tag=GCA000153685_00227
contig_1	Pyrodigal	CDS	250440	251918	.	+	0	ID=GCA000153685_00227;Name=Transmembrane protein;locus_tag=GCA000153685_00227;product=Transmembrane protein;Parent=GCA000153685_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899858.1,SO:0001217,UniParc:UPI00000C14F5,UniRef:UniRef100_P96392,UniRef:UniRef50_P96392,UniRef:UniRef90_P96392
contig_1	Pyrodigal	gene	252102	253922	.	+	.	ID=GCA000153685_00228_gene;locus_tag=GCA000153685_00228;gene=pckG
contig_1	Pyrodigal	CDS	252102	253922	.	+	0	ID=GCA000153685_00228;Name=phosphoenolpyruvate carboxykinase (GTP);locus_tag=GCA000153685_00228;product=phosphoenolpyruvate carboxykinase (GTP);Dbxref=GO:0004611,GO:0004613,GO:0005525,GO:0005576,GO:0005829,GO:0005886,GO:0006094,GO:0006107,GO:0009274,GO:0010106,GO:0017076,GO:0019543,GO:0030145,GO:0033993,GO:0042594,GO:0046327,GO:0052572,GO:0071333;gene=pckG;Parent=GCA000153685_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01596,RefSeq:WP_003401212.1,SO:0001217,UniParc:UPI000013202C,UniRef:UniRef100_P9WIH3,UniRef:UniRef50_P9WIH3,UniRef:UniRef90_P9WIH3;ec_number=4.1.1.32
contig_1	Pyrodigal	gene	253989	254960	.	-	.	ID=GCA000153685_00229_gene;locus_tag=GCA000153685_00229;gene=nadR
contig_1	Pyrodigal	CDS	253989	254960	.	-	0	ID=GCA000153685_00229;Name=putative transcriptional regulatory protein NadR (Probably AsnC-family);locus_tag=GCA000153685_00229;product=putative transcriptional regulatory protein NadR (Probably AsnC-family);gene=nadR;Parent=GCA000153685_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401213.1,SO:0001217,UniParc:UPI00000D5032,UniRef:UniRef100_P96394,UniRef:UniRef50_P96394,UniRef:UniRef90_P96394
contig_1	Pyrodigal	gene	254957	256273	.	-	.	ID=GCA000153685_00230_gene;locus_tag=GCA000153685_00230
contig_1	Pyrodigal	CDS	254957	256273	.	-	0	ID=GCA000153685_00230;Name=putative methyltransferase (Methylase);locus_tag=GCA000153685_00230;product=putative methyltransferase (Methylase);Parent=GCA000153685_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A392,UniRef:UniRef100_P96395,UniRef:UniRef50_A0A7Z7INH9,UniRef:UniRef90_P96395
contig_1	Pyrodigal	gene	256480	257997	.	+	.	ID=GCA000153685_00231_gene;locus_tag=GCA000153685_00231;gene=fadD4
contig_1	Pyrodigal	CDS	256480	257997	.	+	0	ID=GCA000153685_00231;Name=fatty-acid--CoA ligase FadD4;locus_tag=GCA000153685_00231;product=fatty-acid--CoA ligase FadD4;gene=fadD4;Parent=GCA000153685_00231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911098.1,SO:0001217,UniParc:UPI00005EE38D,UniRef:UniRef100_A5TYT9,UniRef:UniRef50_A0A655ELV2,UniRef:UniRef90_A0A655ELV2
contig_1	Pyrodigal	gene	258103	259176	.	-	.	ID=GCA000153685_00232_gene;locus_tag=GCA000153685_00232;gene=fadE3
contig_1	Pyrodigal	CDS	258103	259176	.	-	0	ID=GCA000153685_00232;Name=putative acyl-CoA dehydrogenase fadE3;locus_tag=GCA000153685_00232;product=putative acyl-CoA dehydrogenase fadE3;gene=fadE3;Parent=GCA000153685_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165212,UniRef:UniRef100_A5TYU0,UniRef:UniRef50_A0A2X4UAY4,UniRef:UniRef90_A0A0H3M1M6
contig_1	Pyrodigal	gene	259233	260246	.	+	.	ID=GCA000153685_00233_gene;locus_tag=GCA000153685_00233
contig_1	Pyrodigal	CDS	259233	260246	.	+	0	ID=GCA000153685_00233;Name=Double hotdog hydratase;locus_tag=GCA000153685_00233;product=Double hotdog hydratase;Parent=GCA000153685_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401224.1,SO:0001217,UniParc:UPI00000D108A,UniRef:UniRef100_I6Y340,UniRef:UniRef50_A0A2S8BMU5,UniRef:UniRef90_I6Y340
contig_1	Pyrodigal	gene	260243	261151	.	-	.	ID=GCA000153685_00234_gene;locus_tag=GCA000153685_00234
contig_1	Pyrodigal	CDS	260243	261151	.	-	0	ID=GCA000153685_00234;Name=Esterase;locus_tag=GCA000153685_00234;product=Esterase;Parent=GCA000153685_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900831.1,SO:0001217,UniParc:UPI00000D5034,UniRef:UniRef100_P96399,UniRef:UniRef50_A0A498PP13,UniRef:UniRef90_A0A655A370
contig_1	Pyrodigal	gene	261244	262572	.	+	.	ID=GCA000153685_00235_gene;locus_tag=GCA000153685_00235
contig_1	Pyrodigal	CDS	261244	262572	.	+	0	ID=GCA000153685_00235;Name=Oxidoreductase molybdopterin-binding domain-containing protein;locus_tag=GCA000153685_00235;product=Oxidoreductase molybdopterin-binding domain-containing protein;Parent=GCA000153685_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901829.1,SO:0001217,UniParc:UPI0000164F47,UniRef:UniRef100_A0A0H3L5A5,UniRef:UniRef50_R4M395,UniRef:UniRef90_R4M395
contig_1	Pyrodigal	gene	262574	263122	.	+	.	ID=GCA000153685_00236_gene;locus_tag=GCA000153685_00236
contig_1	Pyrodigal	CDS	262574	263122	.	+	0	ID=GCA000153685_00236;Name=Transmembrane protein;locus_tag=GCA000153685_00236;product=Transmembrane protein;Parent=GCA000153685_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401230.1,SO:0001217,UniParc:UPI00000D0F22,UniRef:UniRef100_A5TYU4,UniRef:UniRef50_G8RU32,UniRef:UniRef90_A0A8I0JXV6
contig_1	Pyrodigal	gene	263132	264343	.	+	.	ID=GCA000153685_00237_gene;locus_tag=GCA000153685_00237;gene=lipC
contig_1	Pyrodigal	CDS	263132	264343	.	+	0	ID=GCA000153685_00237;Name=esterase LipC;locus_tag=GCA000153685_00237;product=esterase LipC;Dbxref=GO:0004806,GO:0005576,GO:0008126,GO:0009986,GO:0042603,GO:0046503;gene=lipC;Parent=GCA000153685_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899863,RefSeq:WP_003899863.1,SO:0001217,UniParc:UPI00000D5ED1,UniRef:UniRef100_P96402,UniRef:UniRef50_P96402,UniRef:UniRef90_P96402;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	264387	265796	.	+	.	ID=GCA000153685_00238_gene;locus_tag=GCA000153685_00238
contig_1	Pyrodigal	CDS	264387	265796	.	+	0	ID=GCA000153685_00238;Name=Putative diacyglycerol O-acyltransferase Rv0221;locus_tag=GCA000153685_00238;product=Putative diacyglycerol O-acyltransferase Rv0221;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0051701,GO:0071731;Parent=GCA000153685_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900834.1,SO:0001217,UniParc:UPI00001394A0,UniRef:UniRef100_P9WKB7,UniRef:UniRef50_P9WKB7,UniRef:UniRef90_P9WKB7;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	265827	266615	.	+	.	ID=GCA000153685_00239_gene;locus_tag=GCA000153685_00239;gene=echA1
contig_1	Pyrodigal	CDS	265827	266615	.	+	0	ID=GCA000153685_00239;Name=Enoyl-CoA hydratase EchA1;locus_tag=GCA000153685_00239;product=Enoyl-CoA hydratase EchA1;gene=echA1;Parent=GCA000153685_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899864.1,SO:0001217,UniParc:UPI00000D6000,UniRef:UniRef100_A5TYU7,UniRef:UniRef50_A0A0U1A0Z3,UniRef:UniRef90_A5TYU7
contig_1	Pyrodigal	gene	266621	268084	.	-	.	ID=GCA000153685_00240_gene;locus_tag=GCA000153685_00240
contig_1	Pyrodigal	CDS	266621	268084	.	-	0	ID=GCA000153685_00240;Name=Putative aldehyde dehydrogenase;locus_tag=GCA000153685_00240;product=Putative aldehyde dehydrogenase;Parent=GCA000153685_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899865.1,SO:0001217,UniParc:UPI00000D5EB7,UniRef:UniRef100_A5TYU8,UniRef:UniRef50_A0A0J6YD10,UniRef:UniRef90_A0A654T844
contig_1	Pyrodigal	gene	268183	268947	.	-	.	ID=GCA000153685_00241_gene;locus_tag=GCA000153685_00241
contig_1	Pyrodigal	CDS	268183	268947	.	-	0	ID=GCA000153685_00241;Name=putative methyltransferase Mb0229c;locus_tag=GCA000153685_00241;product=putative methyltransferase Mb0229c;Dbxref=GO:0008757,GO:0032259;Parent=GCA000153685_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401240.1,SO:0001217,UniParc:UPI00000D11A1,UniRef:UniRef100_P9WJZ9,UniRef:UniRef50_Q7U2J0,UniRef:UniRef90_Q7U2J0;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	268983	270137	.	+	.	ID=GCA000153685_00242_gene;locus_tag=GCA000153685_00242
contig_1	Pyrodigal	CDS	268983	270137	.	+	0	ID=GCA000153685_00242;Name=putative conserved protein;locus_tag=GCA000153685_00242;product=putative conserved protein;Parent=GCA000153685_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401246.1,SO:0001217,UniParc:UPI00000D5F0B,UniRef:UniRef100_P96407,UniRef:UniRef50_A0A1A2ILI5,UniRef:UniRef90_P96407
contig_1	Pyrodigal	gene	270154	271884	.	-	.	ID=GCA000153685_00243_gene;locus_tag=GCA000153685_00243
contig_1	Pyrodigal	CDS	270154	271884	.	-	0	ID=GCA000153685_00243;Name=Transmembrane protein;locus_tag=GCA000153685_00243;product=Transmembrane protein;Parent=GCA000153685_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401250.1,SO:0001217,UniParc:UPI00000D1175,UniRef:UniRef100_A5TYV1,UniRef:UniRef50_A0A1X1ZVV6,UniRef:UniRef90_A0A8I0EJU6
contig_1	Pyrodigal	gene	271894	273174	.	-	.	ID=GCA000153685_00244_gene;locus_tag=GCA000153685_00244
contig_1	Pyrodigal	CDS	271894	273174	.	-	0	ID=GCA000153685_00244;Name=Conserved membrane protein;locus_tag=GCA000153685_00244;product=Conserved membrane protein;Parent=GCA000153685_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_016719572.1,SO:0001217,UniParc:UPI00019017CB,UniRef:UniRef100_A5TYV2,UniRef:UniRef50_A0A163X2F4,UniRef:UniRef90_A5TYV2
contig_1	Pyrodigal	gene	273300	274598	.	+	.	ID=GCA000153685_00245_gene;locus_tag=GCA000153685_00245
contig_1	Pyrodigal	CDS	273300	274598	.	+	0	ID=GCA000153685_00245;Name=Integral membrane acyl transferase;locus_tag=GCA000153685_00245;product=Integral membrane acyl transferase;Parent=GCA000153685_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27307,SO:0001217,UniParc:UPI0003645940,UniRef:UniRef100_A5TYV3,UniRef:UniRef50_D5PAV4,UniRef:UniRef90_A0A654ZR35;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	274626	275039	.	-	.	ID=GCA000153685_00246_gene;locus_tag=GCA000153685_00246;gene=vapC51
contig_1	Pyrodigal	CDS	274626	275039	.	-	0	ID=GCA000153685_00246;Name=Ribonuclease VapC51;locus_tag=GCA000153685_00246;product=Ribonuclease VapC51;Dbxref=GO:0000287,GO:0004540;gene=vapC51;Parent=GCA000153685_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911071.1,SO:0001217,UniParc:UPI00005EE391,UniRef:UniRef100_L0T5V6,UniRef:UniRef50_L0T5V6,UniRef:UniRef90_L0T5V6;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	275030	275224	.	-	.	ID=GCA000153685_00247_gene;locus_tag=GCA000153685_00247;gene=vapB51
contig_1	Pyrodigal	CDS	275030	275224	.	-	0	ID=GCA000153685_00247;Name=Putative antitoxin VapB51;locus_tag=GCA000153685_00247;product=Putative antitoxin VapB51;gene=vapB51;Parent=GCA000153685_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911072.1,SO:0001217,UniParc:UPI00005EE392,UniRef:UniRef100_I6WXS6,UniRef:UniRef50_I6WXS6,UniRef:UniRef90_I6WXS6
contig_1	Pyrodigal	gene	275303	276283	.	-	.	ID=GCA000153685_00248_gene;locus_tag=GCA000153685_00248;gene=php
contig_1	Pyrodigal	CDS	275303	276283	.	-	0	ID=GCA000153685_00248;Name=Phosphotriesterase-like y protein;locus_tag=GCA000153685_00248;product=Phosphotriesterase-like y protein;Dbxref=GO:0008270,GO:0009056,GO:0016788;gene=php;Parent=GCA000153685_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07048,RefSeq:WP_003900835.1,SO:0001217,UniParc:UPI00001319E9,UniRef:UniRef100_P9WHN9,UniRef:UniRef50_P9WHN9,UniRef:UniRef90_P9WHN9
contig_1	Pyrodigal	gene	276378	278084	.	+	.	ID=GCA000153685_00249_gene;locus_tag=GCA000153685_00249
contig_1	Pyrodigal	CDS	276378	278084	.	+	0	ID=GCA000153685_00249;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_00249;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401265.1,SO:0001217,UniParc:UPI00000D6054,UniRef:UniRef100_A5TYV6,UniRef:UniRef50_A0A0T9AU78,UniRef:UniRef90_A0A0T9AU78
contig_1	Pyrodigal	gene	278219	278908	.	+	.	ID=GCA000153685_00250_gene;locus_tag=GCA000153685_00250
contig_1	Pyrodigal	CDS	278219	278908	.	+	0	ID=GCA000153685_00250;Name=TetR/AcrR-family transcriptional regulator;locus_tag=GCA000153685_00250;product=TetR/AcrR-family transcriptional regulator;Parent=GCA000153685_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401268.1,SO:0001217,UniParc:UPI00000D142F,UniRef:UniRef100_A5TYV7,UniRef:UniRef50_A0A0N7H7R6,UniRef:UniRef90_A5TYV7
contig_1	Pyrodigal	gene	278905	279849	.	+	.	ID=GCA000153685_00251_gene;locus_tag=GCA000153685_00251;gene=nrdB
contig_1	Pyrodigal	CDS	278905	279849	.	+	0	ID=GCA000153685_00251;Name=R2-like ligand-binding oxidase;locus_tag=GCA000153685_00251;product=R2-like ligand-binding oxidase;Dbxref=GO:0009263,GO:0016491,GO:0046872;gene=nrdB;Parent=GCA000153685_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401270.1,SO:0001217,UniParc:UPI0000164F4B,UniRef:UniRef100_Q7U2I1,UniRef:UniRef50_P9WH69,UniRef:UniRef90_P9WH69;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	279925	281298	.	-	.	ID=GCA000153685_00252_gene;locus_tag=GCA000153685_00252;gene=gabD1
contig_1	Pyrodigal	CDS	279925	281298	.	-	0	ID=GCA000153685_00252;Name=NADP-dependent succinic semialdehyde dehydrogenase;locus_tag=GCA000153685_00252;product=NADP-dependent succinic semialdehyde dehydrogenase;Dbxref=GO:0004030,GO:0004777,GO:0005886,GO:0006099,GO:0009013,GO:0036243;gene=gabD1;Parent=GCA000153685_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912534.1,SO:0001217,UniParc:UPI00005EE393,UniRef:UniRef100_P9WNX9,UniRef:UniRef50_P9WNX9,UniRef:UniRef90_P9WNX9;ec_number=1.2.1.79
contig_1	Pyrodigal	gene	281486	282934	.	-	.	ID=GCA000153685_00253_gene;locus_tag=GCA000153685_00253
contig_1	Pyrodigal	CDS	281486	282934	.	-	0	ID=GCA000153685_00253;Name=Conserved transmembrane protein;locus_tag=GCA000153685_00253;product=Conserved transmembrane protein;Parent=GCA000153685_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23555,RefSeq:WP_003401279.1,SO:0001217,UniParc:UPI00000D0F56,UniRef:UniRef100_A5TYW0,UniRef:UniRef50_R4YYE2,UniRef:UniRef90_A5TYW0
contig_1	Pyrodigal	gene	282969	287171	.	-	.	ID=GCA000153685_00254_gene;locus_tag=GCA000153685_00254;gene=aftD
contig_1	Pyrodigal	CDS	282969	287171	.	-	0	ID=GCA000153685_00254;Name=alpha-(1->3)-arabinofuranosyltransferase;locus_tag=GCA000153685_00254;product=alpha-(1->3)-arabinofuranosyltransferase;Dbxref=GO:0005886,GO:0016740,GO:0045227;gene=aftD;Parent=GCA000153685_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16648,RefSeq:WP_003902628.1,SO:0001217,UniParc:UPI0000164F4D,UniRef:UniRef100_Q7DA75,UniRef:UniRef50_A0QPD4,UniRef:UniRef90_P96419,VFDB:VFC0258,VFDB:VFG052256;ec_number=2.4.2.47
contig_1	Pyrodigal	gene	287218	287391	.	-	.	ID=GCA000153685_00255_gene;locus_tag=GCA000153685_00255
contig_1	Pyrodigal	CDS	287218	287391	.	-	0	ID=GCA000153685_00255;Name=Putative secreted protein Rv0236A;locus_tag=GCA000153685_00255;product=Putative secreted protein Rv0236A;Parent=GCA000153685_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401289.1,SO:0001217,UniParc:UPI00001394D9,UniRef:UniRef100_P9WLB1,UniRef:UniRef50_P9WLB1,UniRef:UniRef90_P9WLB1
contig_1	Pyrodigal	gene	287506	288672	.	+	.	ID=GCA000153685_00256_gene;locus_tag=GCA000153685_00256;gene=lpqI
contig_1	Pyrodigal	CDS	287506	288672	.	+	0	ID=GCA000153685_00256;Name=beta-N-acetylhexosaminidase;locus_tag=GCA000153685_00256;product=beta-N-acetylhexosaminidase;Dbxref=GO:0005886,GO:0005975,GO:0009254,GO:0016231,GO:0071555;gene=lpqI;Parent=GCA000153685_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401295,RefSeq:WP_003401295.1,SO:0001217,UniParc:UPI00000D5EF7,UniRef:UniRef100_L7N6B0,UniRef:UniRef50_L7N6B0,UniRef:UniRef90_L7N6B0;ec_number=3.2.1.52
contig_1	Pyrodigal	gene	288796	289362	.	+	.	ID=GCA000153685_00257_gene;locus_tag=GCA000153685_00257
contig_1	Pyrodigal	CDS	288796	289362	.	+	0	ID=GCA000153685_00257;Name=putative transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_00257;product=putative transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE396,UniRef:UniRef100_O53661,UniRef:UniRef50_O53661,UniRef:UniRef90_O53661
contig_1	Pyrodigal	gene	289424	289657	.	+	.	ID=GCA000153685_00258_gene;locus_tag=GCA000153685_00258;gene=vapB24
contig_1	Pyrodigal	CDS	289424	289657	.	+	0	ID=GCA000153685_00258;Name=Putative antitoxin VapB24;locus_tag=GCA000153685_00258;product=Putative antitoxin VapB24;gene=vapB24;Parent=GCA000153685_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401300.1,SO:0001217,UniParc:UPI00000D1129,UniRef:UniRef100_P9WJ41,UniRef:UniRef50_P9WJ41,UniRef:UniRef90_P9WJ41
contig_1	Pyrodigal	gene	289665	290102	.	+	.	ID=GCA000153685_00259_gene;locus_tag=GCA000153685_00259;gene=vapC24
contig_1	Pyrodigal	CDS	289665	290102	.	+	0	ID=GCA000153685_00259;Name=Ribonuclease VapC24;locus_tag=GCA000153685_00259;product=Ribonuclease VapC24;Dbxref=GO:0000287,GO:0004540,GO:0005886,GO:0045926;gene=vapC24;Parent=GCA000153685_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900837.1,SO:0001217,UniParc:UPI00000D113E,UniRef:UniRef100_P9WF87,UniRef:UniRef50_P9WF87,UniRef:UniRef90_P9WF87;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	290132	290974	.	-	.	ID=GCA000153685_00260_gene;locus_tag=GCA000153685_00260;gene=htdX
contig_1	Pyrodigal	CDS	290132	290974	.	-	0	ID=GCA000153685_00260;Name=3-hydroxyacyl-thioester dehydratase HtdX;locus_tag=GCA000153685_00260;product=3-hydroxyacyl-thioester dehydratase HtdX;Dbxref=GO:0004312,GO:0005835,GO:0005886,GO:0006631,GO:0006633,GO:0018812,GO:0019171;gene=htdX;Parent=GCA000153685_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401305,RefSeq:WP_003401305.1,SO:0001217,UniParc:UPI00000D5F9A,UniRef:UniRef100_O53664,UniRef:UniRef50_O53664,UniRef:UniRef90_O53664;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	290985	292349	.	-	.	ID=GCA000153685_00261_gene;locus_tag=GCA000153685_00261;gene=fabG4
contig_1	Pyrodigal	CDS	290985	292349	.	-	0	ID=GCA000153685_00261;Name=3-oxoacyl-ACP reductase;locus_tag=GCA000153685_00261;product=3-oxoacyl-ACP reductase;Dbxref=GO:0006631,GO:0016491,GO:0016616,GO:0047025;gene=fabG4;Parent=GCA000153685_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899869.1,SO:0001217,UniParc:UPI00000D5FD7,UniRef:UniRef100_I6Y778,UniRef:UniRef50_I6Y778,UniRef:UniRef90_I6Y778;ec_number=1.1.1.212
contig_1	Pyrodigal	gene	292491	293813	.	+	.	ID=GCA000153685_00262_gene;locus_tag=GCA000153685_00262
contig_1	Pyrodigal	CDS	292491	293813	.	+	0	ID=GCA000153685_00262;Name=acetyl-CoA C-acetyltransferase;locus_tag=GCA000153685_00262;product=acetyl-CoA C-acetyltransferase;Dbxref=GO:0016746;Parent=GCA000153685_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401309.1,SO:0001217,UniParc:UPI00000D110E,UniRef:UniRef100_A5TYW9,UniRef:UniRef50_A0A0D8I0M8,UniRef:UniRef90_A0A3E2N021;ec_number=2.3.1.9
contig_1	Infernal	gene	293924	293982	.	+	.	ID=GCA000153685_00263_gene;locus_tag=GCA000153685_00263;gene=F6
contig_1	Infernal	ncRNA	293924	293982	2.7e-09	+	.	ID=GCA000153685_00263;Name=F6 TB sRNA;locus_tag=GCA000153685_00263;product=F6 TB sRNA;Dbxref=RFAM:RF01791;Parent=GCA000153685_00263_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01791
contig_1	Pyrodigal	gene	294119	295954	.	-	.	ID=GCA000153685_00264_gene;locus_tag=GCA000153685_00264;gene=fadE5
contig_1	Pyrodigal	CDS	294119	295954	.	-	0	ID=GCA000153685_00264;Name=Broad-specificity linear acyl-CoA dehydrogenase FadE5;locus_tag=GCA000153685_00264;product=Broad-specificity linear acyl-CoA dehydrogenase FadE5;Dbxref=GO:0004466,GO:0005576,GO:0005886,GO:0006631,GO:0016937,GO:0052572,GO:0070991;gene=fadE5;Parent=GCA000153685_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_003401312.1,SO:0001217,UniParc:UPI00000D5F23,UniRef:UniRef100_O53666,UniRef:UniRef50_O53666,UniRef:UniRef90_O53666
contig_1	Pyrodigal	gene	296326	296814	.	+	.	ID=GCA000153685_00265_gene;locus_tag=GCA000153685_00265
contig_1	Pyrodigal	CDS	296326	296814	.	+	0	ID=GCA000153685_00265;Name=putative oxidoreductase;locus_tag=GCA000153685_00265;product=putative oxidoreductase;Parent=GCA000153685_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401313.1,SO:0001217,UniParc:UPI00000D5FF1,UniRef:UniRef100_O53667,UniRef:UniRef50_A0A0J6WGH7,UniRef:UniRef90_O53667
contig_1	Pyrodigal	gene	297130	298440	.	+	.	ID=GCA000153685_00266_gene;locus_tag=GCA000153685_00266
contig_1	Pyrodigal	CDS	297130	298440	.	+	0	ID=GCA000153685_00266;Name=Integral membrane protein;locus_tag=GCA000153685_00266;product=Integral membrane protein;Parent=GCA000153685_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401317.1,SO:0001217,UniParc:UPI0000165213,UniRef:UniRef100_A5TYX2,UniRef:UniRef50_Q7DA65,UniRef:UniRef90_Q7DA65
contig_1	Pyrodigal	gene	298437	299183	.	-	.	ID=GCA000153685_00267_gene;locus_tag=GCA000153685_00267;gene=sdhB
contig_1	Pyrodigal	CDS	298437	299183	.	-	0	ID=GCA000153685_00267;Name=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;locus_tag=GCA000153685_00267;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;gene=sdhB;Parent=GCA000153685_00267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0479,RefSeq:WP_003401319.1,SO:0001217,UniParc:UPI00000D5E73,UniRef:UniRef100_A5TYX3,UniRef:UniRef50_A0A2E7UCR5,UniRef:UniRef90_Q73TM1
contig_1	Pyrodigal	gene	299184	301124	.	-	.	ID=GCA000153685_00268_gene;locus_tag=GCA000153685_00268
contig_1	Pyrodigal	CDS	299184	301124	.	-	0	ID=GCA000153685_00268;Name=fumarate reductase/succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000153685_00268;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;Dbxref=GO:0016491;Parent=GCA000153685_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401322.1,SO:0001217,UniParc:UPI00000D5F66,UniRef:UniRef100_A5TYX4,UniRef:UniRef50_A0A7Y9KBL0,UniRef:UniRef90_R4LRK6
contig_1	Pyrodigal	gene	301155	301976	.	-	.	ID=GCA000153685_00269_gene;locus_tag=GCA000153685_00269
contig_1	Pyrodigal	CDS	301155	301976	.	-	0	ID=GCA000153685_00269;Name=Succinate dehydrogenase membrane anchor subunit;locus_tag=GCA000153685_00269;product=Succinate dehydrogenase membrane anchor subunit;Parent=GCA000153685_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401324.1,SO:0001217,UniParc:UPI00000D11D5,UniRef:UniRef100_A5TYX5,UniRef:UniRef50_A0A1Q4WHV3,UniRef:UniRef90_A0A1X2LQM2
contig_1	Pyrodigal	gene	302056	302349	.	-	.	ID=GCA000153685_00270_gene;locus_tag=GCA000153685_00270
contig_1	Pyrodigal	CDS	302056	302349	.	-	0	ID=GCA000153685_00270;Name=putative protein Rv0250c;locus_tag=GCA000153685_00270;product=putative protein Rv0250c;Parent=GCA000153685_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401329.1,SO:0001217,UniParc:UPI00000CCB89,UniRef:UniRef100_O53672,UniRef:UniRef50_O53672,UniRef:UniRef90_O53672
contig_1	Pyrodigal	gene	302494	302973	.	-	.	ID=GCA000153685_00271_gene;locus_tag=GCA000153685_00271;gene=acr2
contig_1	Pyrodigal	CDS	302494	302973	.	-	0	ID=GCA000153685_00271;Name=stress-responsive chaperone Acr2;locus_tag=GCA000153685_00271;product=stress-responsive chaperone Acr2;gene=acr2;Parent=GCA000153685_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900838,RefSeq:WP_003900838.1,SO:0001217,UniParc:UPI00000D5F0F,UniRef:UniRef100_O53673,UniRef:UniRef50_O53673,UniRef:UniRef90_O53673
contig_1	Pyrodigal	gene	303238	305748	.	+	.	ID=GCA000153685_00272_gene;locus_tag=GCA000153685_00272
contig_1	Pyrodigal	CDS	303238	305748	.	+	0	ID=GCA000153685_00272;Name=assimilatory sulfite reductase (ferredoxin);locus_tag=GCA000153685_00272;product=assimilatory sulfite reductase (ferredoxin);Parent=GCA000153685_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE398,UniRef:UniRef100_A0A0H3LBT3,UniRef:UniRef50_O53674,UniRef:UniRef90_O53674
contig_1	Pyrodigal	gene	305774	306130	.	+	.	ID=GCA000153685_00273_gene;locus_tag=GCA000153685_00273
contig_1	Pyrodigal	CDS	305774	306130	.	+	0	ID=GCA000153685_00273;Name=Nitrite reductase [NAD(P)H]%2C small subunit;locus_tag=GCA000153685_00273;product=Nitrite reductase [NAD(P)H]%2C small subunit;Parent=GCA000153685_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401341.1,SO:0001217,UniParc:UPI00000D3AF2,UniRef:UniRef100_A5TYX9,UniRef:UniRef50_W5TB56,UniRef:UniRef90_A0A1V3WR15
contig_1	Pyrodigal	gene	306146	306670	.	-	.	ID=GCA000153685_00274_gene;locus_tag=GCA000153685_00274
contig_1	Pyrodigal	CDS	306146	306670	.	-	0	ID=GCA000153685_00274;Name=Adenosylcobinamide kinase;locus_tag=GCA000153685_00274;product=Adenosylcobinamide kinase;Parent=GCA000153685_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02231,RefSeq:WP_003900839.1,SO:0001217,UniParc:UPI000127801C,UniRef:UniRef100_UPI000127801C,UniRef:UniRef50_F5XIZ6,UniRef:UniRef90_O53676;ec_number=2.7.7.62
contig_1	Pyrodigal	gene	306695	308179	.	-	.	ID=GCA000153685_00275_gene;locus_tag=GCA000153685_00275;gene=cobQ
contig_1	Pyrodigal	CDS	306695	308179	.	-	0	ID=GCA000153685_00275;Name=cobyric acid synthase;locus_tag=GCA000153685_00275;product=cobyric acid synthase;Dbxref=GO:0003824,GO:0009236,GO:0015420;gene=cobQ;Parent=GCA000153685_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899877.1,SO:0001217,UniParc:UPI0000127DF9,UniRef:UniRef100_P9WP95,UniRef:UniRef50_P9WP95,UniRef:UniRef90_P9WP95
contig_1	Pyrodigal	gene	308198	309868	.	-	.	ID=GCA000153685_00276_gene;locus_tag=GCA000153685_00276;gene=pPE2
contig_1	Pyrodigal	CDS	308198	309868	.	-	0	ID=GCA000153685_00276;Name=PPE family protein PPE2;locus_tag=GCA000153685_00276;product=PPE family protein PPE2;Dbxref=GO:0005576,GO:0005829,GO:0005886,GO:0030430,GO:0042025,GO:0052572;gene=pPE2;Parent=GCA000153685_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401347.1,SO:0001217,UniParc:UPI00000D4FB9,UniRef:UniRef100_P9WI47,UniRef:UniRef50_P9WI47,UniRef:UniRef90_P9WI47
contig_1	Infernal	regulatory_region	310007	310188	6.3e-16	-	.	ID=FNJOPAJJMO_76;Name=Cobalamin riboswitch aptamer;product=Cobalamin riboswitch aptamer;Dbxref=RFAM:RF00174;inference=profile:Rfam:RF00174;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	310615	311070	.	-	.	ID=GCA000153685_00277_gene;locus_tag=GCA000153685_00277
contig_1	Pyrodigal	CDS	310615	311070	.	-	0	ID=GCA000153685_00277;Name=Tetracyclin repressor-like C-terminal domain-containing protein;locus_tag=GCA000153685_00277;product=Tetracyclin repressor-like C-terminal domain-containing protein;Parent=GCA000153685_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401352.1,SO:0001217,UniParc:UPI00000D10E9,UniRef:UniRef100_P95215,UniRef:UniRef50_A0A1A3EG85,UniRef:UniRef90_P95215
contig_1	Pyrodigal	gene	311095	311838	.	-	.	ID=GCA000153685_00278_gene;locus_tag=GCA000153685_00278
contig_1	Pyrodigal	CDS	311095	311838	.	-	0	ID=GCA000153685_00278;Name=Sirohydrochlorin chelatase;locus_tag=GCA000153685_00278;product=Sirohydrochlorin chelatase;Parent=GCA000153685_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401354.1,SO:0001217,UniParc:UPI0000164F51,UniRef:UniRef100_A0A679LAL8,UniRef:UniRef50_Q73TL3,UniRef:UniRef90_P95216
contig_1	Pyrodigal	gene	311835	312980	.	-	.	ID=GCA000153685_00279_gene;locus_tag=GCA000153685_00279
contig_1	Pyrodigal	CDS	311835	312980	.	-	0	ID=GCA000153685_00279;Name=uroporphyrinogen-III synthase;locus_tag=GCA000153685_00279;product=uroporphyrinogen-III synthase;Dbxref=GO:0004852,GO:0006780;Parent=GCA000153685_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401357.1,SO:0001217,UniParc:UPI00000D5EA0,UniRef:UniRef100_P95217,UniRef:UniRef50_J1ZUI3,UniRef:UniRef90_P95217;ec_number=4.2.1.75
contig_1	Pyrodigal	gene	313080	314489	.	-	.	ID=GCA000153685_00280_gene;locus_tag=GCA000153685_00280;gene=narK3
contig_1	Pyrodigal	CDS	313080	314489	.	-	0	ID=GCA000153685_00280;Name=Integral membrane nitrite extrusion protein NarK3;locus_tag=GCA000153685_00280;product=Integral membrane nitrite extrusion protein NarK3;gene=narK3;Parent=GCA000153685_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401360.1,SO:0001217,UniParc:UPI00000D5F59,UniRef:UniRef100_A5TYY7,UniRef:UniRef50_A0A5N8XEK5,UniRef:UniRef90_A5TYY7
contig_1	Pyrodigal	gene	314630	315175	.	-	.	ID=GCA000153685_00281_gene;locus_tag=GCA000153685_00281;gene=aac(2')-Ic
contig_1	Pyrodigal	CDS	314630	315175	.	-	0	ID=GCA000153685_00281;Name=aminoglycoside N-acetyltransferase AAC(2')-Ic;locus_tag=GCA000153685_00281;product=aminoglycoside N-acetyltransferase AAC(2')-Ic;Dbxref=GO:0005886,GO:0030649,GO:0034069,GO:0046677,GO:0047921;gene=aac(2')-Ic;Parent=GCA000153685_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:WP_003899880.1,RefSeq:WP_003899880.1,SO:0001217,UniParc:UPI0000113376,UniRef:UniRef100_P9WQG9,UniRef:UniRef50_P9WQG9,UniRef:UniRef90_P9WQG9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	315185	316087	.	-	.	ID=GCA000153685_00282_gene;locus_tag=GCA000153685_00282
contig_1	Pyrodigal	CDS	315185	316087	.	-	0	ID=GCA000153685_00282;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000153685_00282;product=Carboxyltransferase domain-containing protein;Parent=GCA000153685_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401367.1,SO:0001217,UniParc:UPI00000D5023,UniRef:UniRef100_P95220,UniRef:UniRef50_A0A5S9PJ17,UniRef:UniRef90_P95220
contig_1	Pyrodigal	gene	316104	316757	.	-	.	ID=GCA000153685_00283_gene;locus_tag=GCA000153685_00283
contig_1	Pyrodigal	CDS	316104	316757	.	-	0	ID=GCA000153685_00283;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000153685_00283;product=Carboxyltransferase domain-containing protein;Parent=GCA000153685_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6411,UniRef:UniRef100_P95221,UniRef:UniRef50_P95221,UniRef:UniRef90_P95221
contig_1	Pyrodigal	gene	316832	317824	.	-	.	ID=GCA000153685_00284_gene;locus_tag=GCA000153685_00284
contig_1	Pyrodigal	CDS	316832	317824	.	-	0	ID=GCA000153685_00284;Name=ABC transporter substrate-binding protein;locus_tag=GCA000153685_00284;product=ABC transporter substrate-binding protein;Parent=GCA000153685_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401373.1,SO:0001217,UniParc:UPI00000D5F06,UniRef:UniRef100_A5TYZ1,UniRef:UniRef50_Q73TK8,UniRef:UniRef90_A0A8I0EKI0
contig_1	Pyrodigal	gene	317846	321475	.	-	.	ID=GCA000153685_00285_gene;locus_tag=GCA000153685_00285;gene=oplA
contig_1	Pyrodigal	CDS	317846	321475	.	-	0	ID=GCA000153685_00285;Name=5-oxoprolinase OplA;locus_tag=GCA000153685_00285;product=5-oxoprolinase OplA;gene=oplA;Parent=GCA000153685_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899883.1,SO:0001217,UniParc:UPI00000C14F1,UniRef:UniRef100_A5TYZ2,UniRef:UniRef50_A0A177HIL1,UniRef:UniRef90_A5TYZ2
contig_1	Pyrodigal	gene	321652	323043	.	+	.	ID=GCA000153685_00286_gene;locus_tag=GCA000153685_00286
contig_1	Pyrodigal	CDS	321652	323043	.	+	0	ID=GCA000153685_00286;Name=Nitrate/nitrite transporter;locus_tag=GCA000153685_00286;product=Nitrate/nitrite transporter;Parent=GCA000153685_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02575,RefSeq:WP_003401380.1,SO:0001217,UniParc:UPI00000D5F9F,UniRef:UniRef100_P95224,UniRef:UniRef50_A0A7R7N0V2,UniRef:UniRef90_P95224
contig_1	Pyrodigal	gene	323085	323342	.	-	.	ID=GCA000153685_00287_gene;locus_tag=GCA000153685_00287
contig_1	Pyrodigal	CDS	323085	323342	.	-	0	ID=GCA000153685_00287;Name=Putative antitoxin Rv0268c;locus_tag=GCA000153685_00287;product=Putative antitoxin Rv0268c;Parent=GCA000153685_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911137.1,SO:0001217,UniParc:UPI0001E61FC6,UniRef:UniRef100_P95225,UniRef:UniRef50_P95225,UniRef:UniRef90_P95225
contig_1	Pyrodigal	gene	323659	324852	.	-	.	ID=GCA000153685_00288_gene;locus_tag=GCA000153685_00288
contig_1	Pyrodigal	CDS	323659	324852	.	-	0	ID=GCA000153685_00288;Name=DNA ligase D polymerase domain-containing protein;locus_tag=GCA000153685_00288;product=DNA ligase D polymerase domain-containing protein;Parent=GCA000153685_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01971,RefSeq:WP_003401386.1,SO:0001217,UniParc:UPI00000CCBF5,UniRef:UniRef100_P95226,UniRef:UniRef50_A0A927IBZ5,UniRef:UniRef90_P95226;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	324888	326570	.	+	.	ID=GCA000153685_00289_gene;locus_tag=GCA000153685_00289;gene=fadD2
contig_1	Pyrodigal	CDS	324888	326570	.	+	0	ID=GCA000153685_00289;Name=long-chain-fatty-acid--CoA ligase FadD2;locus_tag=GCA000153685_00289;product=long-chain-fatty-acid--CoA ligase FadD2;gene=fadD2;Parent=GCA000153685_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899884.1,SO:0001217,UniParc:UPI00000D5F6F,UniRef:UniRef100_A5TYZ6,UniRef:UniRef50_A0A448IFL2,UniRef:UniRef90_A0A0H3L911;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	326587	328782	.	-	.	ID=GCA000153685_00290_gene;locus_tag=GCA000153685_00290
contig_1	Pyrodigal	CDS	326587	328782	.	-	0	ID=GCA000153685_00290;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_00290;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401392.1,SO:0001217,UniParc:UPI00000D5FD2,UniRef:UniRef100_A5TYZ7,UniRef:UniRef50_A0A654ZU85,UniRef:UniRef90_A0A654ZU85
contig_1	Pyrodigal	gene	328896	330029	.	-	.	ID=GCA000153685_00291_gene;locus_tag=GCA000153685_00291
contig_1	Pyrodigal	CDS	328896	330029	.	-	0	ID=GCA000153685_00291;Name=Alpha/beta hydrolase;locus_tag=GCA000153685_00291;product=Alpha/beta hydrolase;Parent=GCA000153685_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401394.1,SO:0001217,UniParc:UPI00000CCBF6,UniRef:UniRef100_P95229,UniRef:UniRef50_L0IPP7,UniRef:UniRef90_P95229
contig_1	Pyrodigal	gene	330026	330646	.	-	.	ID=GCA000153685_00292_gene;locus_tag=GCA000153685_00292
contig_1	Pyrodigal	CDS	330026	330646	.	-	0	ID=GCA000153685_00292;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_00292;product=putative transcriptional regulatory protein;Parent=GCA000153685_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401397.1,SO:0001217,UniParc:UPI00000D0FE2,UniRef:UniRef100_O86342,UniRef:UniRef50_Q73TK0,UniRef:UniRef90_O86342
contig_1	Pyrodigal	gene	330743	331324	.	+	.	ID=GCA000153685_00293_gene;locus_tag=GCA000153685_00293
contig_1	Pyrodigal	CDS	330743	331324	.	+	0	ID=GCA000153685_00293;Name=Conserved protein;locus_tag=GCA000153685_00293;product=Conserved protein;Parent=GCA000153685_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401399.1,SO:0001217,UniParc:UPI0000165215,UniRef:UniRef100_O53680,UniRef:UniRef50_I2AKD3,UniRef:UniRef90_O53680
contig_1	Pyrodigal	gene	331254	331988	.	-	.	ID=GCA000153685_00294_gene;locus_tag=GCA000153685_00294
contig_1	Pyrodigal	CDS	331254	331988	.	-	0	ID=GCA000153685_00294;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_00294;product=HTH tetR-type domain-containing protein;Parent=GCA000153685_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000324BE6E,UniRef:UniRef100_L7N6A2,UniRef:UniRef50_A0A829CGW5,UniRef:UniRef90_A0A829CGW5
contig_1	Pyrodigal	gene	332069	332989	.	+	.	ID=GCA000153685_00295_gene;locus_tag=GCA000153685_00295
contig_1	Pyrodigal	CDS	332069	332989	.	+	0	ID=GCA000153685_00295;Name=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;locus_tag=GCA000153685_00295;product=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;Parent=GCA000153685_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401404.1,SO:0001217,UniParc:UPI00000D1154,UniRef:UniRef100_O53682,UniRef:UniRef50_O53682,UniRef:UniRef90_O53682
contig_1	Pyrodigal	gene	333029	333457	.	-	.	ID=GCA000153685_00296_gene;locus_tag=GCA000153685_00296;gene=vapC31
contig_1	Pyrodigal	CDS	333029	333457	.	-	0	ID=GCA000153685_00296;Name=Ribonuclease VapC31;locus_tag=GCA000153685_00296;product=Ribonuclease VapC31;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC31;Parent=GCA000153685_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401406.1,SO:0001217,UniParc:UPI00000D0F3A,UniRef:UniRef100_P9WF85,UniRef:UniRef50_P9WF75,UniRef:UniRef90_P9WF75;ec_number=3.1.-.-
contig_1	PILER-CR	repeat_region	335149	335270	.	?	.	ID=FNJOPAJJMO_87;Name=CRISPR array with 3 repeats of length 26%2C consensus sequence CCGCCGTTGCCGCCGTTGCCGATCA and spacer length 19;product=CRISPR array with 3 repeats of length 26%2C consensus sequence CCGCCGTTGCCGCCGTTGCCGATCA and spacer length 19;inference=COORDINATES:alignment:pilercr:1.02;Note=SO:0001459;rpt_family=CRISPR;rpt_type=direct;rpt_unit_seq=CCGCCGTTGCCGCCGTTGCCGATCA
contig_1	Pyrodigal	gene	336829	339480	.	-	.	ID=GCA000153685_00297_gene;locus_tag=GCA000153685_00297
contig_1	Pyrodigal	CDS	336829	339480	.	-	0	ID=GCA000153685_00297;Name=PE-PGRS family protein;locus_tag=GCA000153685_00297;product=PE-PGRS family protein;Parent=GCA000153685_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036361.1,SO:0001217,UniParc:UPI0003AB4A86,UniRef:UniRef100_A0AA44LJR3,UniRef:UniRef50_P9WIG3,UniRef:UniRef90_A0A0H3M7N8
contig_1	Pyrodigal	gene	339730	342234	.	-	.	ID=GCA000153685_00298_gene;locus_tag=GCA000153685_00298
contig_1	Pyrodigal	CDS	339730	342234	.	-	0	ID=GCA000153685_00298;Name=PE family protein;locus_tag=GCA000153685_00298;product=PE family protein;Parent=GCA000153685_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031649587.1,SO:0001217,UniParc:UPI000459C23E,UniRef:UniRef100_A0AA44LJV1,UniRef:UniRef50_L0T4W6,UniRef:UniRef90_A0AA44LJV1
contig_1	Pyrodigal	gene	342268	342528	.	+	.	ID=GCA000153685_00299_gene;locus_tag=GCA000153685_00299;pseudogene=unitary
contig_1	Pyrodigal	CDS	342268	342528	.	+	0	ID=GCA000153685_00299;Name=hypothetical protein;locus_tag=GCA000153685_00299;product=hypothetical protein;pseudogene=unitary;Parent=GCA000153685_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904373.1,SO:0001217,UniParc:UPI0001C595DF,UniRef:UniRef100_A0A0E8W2P1,UniRef:UniRef50_A0A0E8W2P1,UniRef:UniRef90_A0A0E8W2P1
contig_1	Pyrodigal	gene	342525	344135	.	+	.	ID=GCA000153685_00300_gene;locus_tag=GCA000153685_00300;gene=pPE3
contig_1	Pyrodigal	CDS	342525	344135	.	+	0	ID=GCA000153685_00300;Name=putative PPE family protein PPE3;locus_tag=GCA000153685_00300;product=putative PPE family protein PPE3;Dbxref=GO:0052572;gene=pPE3;Parent=GCA000153685_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010950374.1,SO:0001217,UniParc:UPI00001A8EB0,UniRef:UniRef100_P9WI44,UniRef:UniRef50_P9WI44,UniRef:UniRef90_P9WI44
contig_1	Pyrodigal	gene	344159	345067	.	+	.	ID=GCA000153685_00301_gene;locus_tag=GCA000153685_00301
contig_1	Pyrodigal	CDS	344159	345067	.	+	0	ID=GCA000153685_00301;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_0290;locus_tag=GCA000153685_00301;product=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_0290;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401448.1,SO:0001217,UniParc:UPI00000D11AC,UniRef:UniRef100_P9WFI9,UniRef:UniRef50_P9WFI9,UniRef:UniRef90_P9WFI9;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	345291	347186	.	+	.	ID=GCA000153685_00302_gene;locus_tag=GCA000153685_00302;gene=eccA3
contig_1	Pyrodigal	CDS	345291	347186	.	+	0	ID=GCA000153685_00302;Name=Type VII secretion system protein EccA3;locus_tag=GCA000153685_00302;product=Type VII secretion system protein EccA3;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006879,GO:0006882,GO:0009274,GO:0009306,GO:0010106,GO:0016887,GO:0033214;gene=eccA3;Parent=GCA000153685_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27084,RefSeq:WP_003898392.1,SO:0001217,UniParc:UPI0000139580,UniRef:UniRef100_P9WPI3,UniRef:UniRef50_P9WPI3,UniRef:UniRef90_P9WPI3,VFDB:VFC0086,VFDB:VFG022019
contig_1	Pyrodigal	gene	347183	348799	.	+	.	ID=GCA000153685_00303_gene;locus_tag=GCA000153685_00303;gene=eccB3
contig_1	Pyrodigal	CDS	347183	348799	.	+	0	ID=GCA000153685_00303;Name=type VII secretion system ESX-3 subunit EccB3;locus_tag=GCA000153685_00303;product=type VII secretion system ESX-3 subunit EccB3;Dbxref=GO:0005524,GO:0005576,GO:0005886,GO:0009274,GO:0009306,GO:0016787;gene=eccB3;Parent=GCA000153685_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401472,KEGG:K27085,RefSeq:WP_003401472.1,SO:0001217,UniParc:UPI00000D118F,UniRef:UniRef100_P9WNR3,UniRef:UniRef50_P9WNR3,UniRef:UniRef90_P9WNR3;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	348796	352788	.	+	.	ID=GCA000153685_00304_gene;locus_tag=GCA000153685_00304;gene=eccC3
contig_1	Pyrodigal	CDS	348796	352788	.	+	0	ID=GCA000153685_00304;Name=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;locus_tag=GCA000153685_00304;product=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009274,GO:0016887;gene=eccC3;Parent=GCA000153685_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003916637,RefSeq:WP_003401478.1,SO:0001217,UniParc:UPI0000164F57,UniRef:UniRef100_P9WNA8,UniRef:UniRef50_P9WNA9,UniRef:UniRef90_P9WNA9
contig_1	Pyrodigal	gene	352785	353093	.	+	.	ID=GCA000153685_00305_gene;locus_tag=GCA000153685_00305;gene=pE5
contig_1	Pyrodigal	CDS	352785	353093	.	+	0	ID=GCA000153685_00305;Name=type VII secretion system ESX-3 target PE5;locus_tag=GCA000153685_00305;product=type VII secretion system ESX-3 target PE5;Dbxref=GO:0005576,GO:0009986,GO:0030313;gene=pE5;Parent=GCA000153685_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401485,RefSeq:WP_003401485.1,SO:0001217,UniParc:UPI0000043EB2,UniRef:UniRef100_L7N695,UniRef:UniRef50_L7N695,UniRef:UniRef90_L7N695
contig_1	Pyrodigal	gene	353096	354637	.	+	.	ID=GCA000153685_00306_gene;locus_tag=GCA000153685_00306;gene=pPE4
contig_1	Pyrodigal	CDS	353096	354637	.	+	0	ID=GCA000153685_00306;Name=type VII secretion system ESX-3 target PPE4;locus_tag=GCA000153685_00306;product=type VII secretion system ESX-3 target PPE4;Dbxref=GO:0005886,GO:0052572;gene=pPE4;Parent=GCA000153685_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401488,RefSeq:WP_003401488.1,SO:0001217,UniParc:UPI00000D6035,UniRef:UniRef100_P9WI43,UniRef:UniRef50_P9WI43,UniRef:UniRef90_P9WI43
contig_1	Pyrodigal	gene	354686	354979	.	+	.	ID=GCA000153685_00307_gene;locus_tag=GCA000153685_00307;gene=esxG
contig_1	Pyrodigal	CDS	354686	354979	.	+	0	ID=GCA000153685_00307;Name=type VII secretion system protein EsxG;locus_tag=GCA000153685_00307;product=type VII secretion system protein EsxG;Dbxref=GO:0005576,GO:0005829,GO:0097013;gene=esxG;Parent=GCA000153685_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401503,BlastRules:WP_011727071,RefSeq:WP_003401503.1,SO:0001217,UniParc:UPI0000036DD5,UniRef:UniRef100_O53692,UniRef:UniRef50_O53692,UniRef:UniRef90_O53692
contig_1	Pyrodigal	gene	355009	355299	.	+	.	ID=GCA000153685_00308_gene;locus_tag=GCA000153685_00308;gene=esxH
contig_1	Pyrodigal	CDS	355009	355299	.	+	0	ID=GCA000153685_00308;Name=type VII secretion system effector EsxH;locus_tag=GCA000153685_00308;product=type VII secretion system effector EsxH;Dbxref=GO:0005576,GO:0005829,GO:0046872,GO:0097013;gene=esxH;Parent=GCA000153685_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401514,RefSeq:WP_003401514.1,SO:0001217,UniParc:UPI0000036DD4,UniRef:UniRef100_P9WNK3,UniRef:UniRef50_P9WNK3,UniRef:UniRef90_P9WNK3
contig_1	Pyrodigal	gene	355310	356197	.	+	.	ID=GCA000153685_00309_gene;locus_tag=GCA000153685_00309;gene=espG3
contig_1	Pyrodigal	CDS	355310	356197	.	+	0	ID=GCA000153685_00309;Name=type VII secretion system ESX-3 associated protein EspG3;locus_tag=GCA000153685_00309;product=type VII secretion system ESX-3 associated protein EspG3;Dbxref=GO:0005737;gene=espG3;Parent=GCA000153685_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401521,KEGG:K27091,RefSeq:WP_003401521.1,SO:0001217,UniParc:UPI00000D1116,UniRef:UniRef100_P9WJC7,UniRef:UniRef50_A0QQ45,UniRef:UniRef90_P9WJC7
contig_1	Pyrodigal	gene	356244	357662	.	+	.	ID=GCA000153685_00310_gene;locus_tag=GCA000153685_00310;gene=eccD3
contig_1	Pyrodigal	CDS	356244	357662	.	+	0	ID=GCA000153685_00310;Name=type VII secretion system ESX-3 subunit EccD3;locus_tag=GCA000153685_00310;product=type VII secretion system ESX-3 subunit EccD3;Dbxref=GO:0005886,GO:0009274,GO:0009306;gene=eccD3;Parent=GCA000153685_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401524,KEGG:K27087,RefSeq:WP_003401524.1,SO:0001217,UniParc:UPI00000D0F99,UniRef:UniRef100_P9WNQ3,UniRef:UniRef50_P9WNQ3,UniRef:UniRef90_P9WNQ3
contig_1	Pyrodigal	gene	357659	359044	.	+	.	ID=GCA000153685_00311_gene;locus_tag=GCA000153685_00311;gene=mycP3
contig_1	Pyrodigal	CDS	357659	359044	.	+	0	ID=GCA000153685_00311;Name=type VII secretion system ESX-3 serine protease mycosin MycP3;locus_tag=GCA000153685_00311;product=type VII secretion system ESX-3 serine protease mycosin MycP3;Dbxref=GO:0004252,GO:0005576,GO:0005886,GO:0008236,GO:0009274,GO:0009306,GO:0016485;gene=mycP3;Parent=GCA000153685_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401528,BlastRules:WP_003879189,BlastRules:WP_011727074,BlastRules:WP_012392515,RefSeq:WP_003401528.1,SO:0001217,UniParc:UPI00000D4FBB,UniRef:UniRef100_O53695,UniRef:UniRef50_O53695,UniRef:UniRef90_O53695;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	359041	360036	.	+	.	ID=GCA000153685_00312_gene;locus_tag=GCA000153685_00312;gene=eccE3
contig_1	Pyrodigal	CDS	359041	360036	.	+	0	ID=GCA000153685_00312;Name=type VII secretion system ESX-3 subunit EccE3;locus_tag=GCA000153685_00312;product=type VII secretion system ESX-3 subunit EccE3;Dbxref=GO:0005886,GO:0009274;gene=eccE3;Parent=GCA000153685_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003916638,RefSeq:WP_003401533.1,SO:0001217,UniParc:UPI0000164F59,UniRef:UniRef100_P9WJE4,UniRef:UniRef50_P9WJE5,UniRef:UniRef90_P9WJE5
contig_1	Pyrodigal	gene	360023	361234	.	-	.	ID=GCA000153685_00313_gene;locus_tag=GCA000153685_00313
contig_1	Pyrodigal	CDS	360023	361234	.	-	0	ID=GCA000153685_00313;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000153685_00313;product=AB hydrolase-1 domain-containing protein;Parent=GCA000153685_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3A4,UniRef:UniRef100_O53697,UniRef:UniRef50_A0A375YF14,UniRef:UniRef90_A0A9P2H559
contig_1	Pyrodigal	gene	361332	362117	.	+	.	ID=GCA000153685_00314_gene;locus_tag=GCA000153685_00314;gene=tam
contig_1	Pyrodigal	CDS	361332	362117	.	+	0	ID=GCA000153685_00314;Name=trans-aconitate 2-methyltransferase;locus_tag=GCA000153685_00314;product=trans-aconitate 2-methyltransferase;Dbxref=GO:0005737,GO:0030798,GO:0032259,GO:0051701;gene=tam;Parent=GCA000153685_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401538.1,SO:0001217,UniParc:UPI00001368CB,UniRef:UniRef100_A5TZ21,UniRef:UniRef50_A5TZ21,UniRef:UniRef90_A5TZ21;ec_number=2.1.1.144
contig_1	Pyrodigal	gene	362106	362909	.	-	.	ID=GCA000153685_00315_gene;locus_tag=GCA000153685_00315;gene=stf0
contig_1	Pyrodigal	CDS	362106	362909	.	-	0	ID=GCA000153685_00315;Name=trehalose 2-sulfotransferase;locus_tag=GCA000153685_00315;product=trehalose 2-sulfotransferase;Dbxref=GO:0005886,GO:0005991,GO:0008146,GO:0009274,GO:0016740,GO:0042803,GO:0046506,GO:0050427,GO:0050656;gene=stf0;Parent=GCA000153685_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21014,RefSeq:WP_003401540.1,SO:0001217,UniParc:UPI00000D11AB,UniRef:UniRef100_O53699,UniRef:UniRef50_O53699,UniRef:UniRef90_O53699;ec_number=2.8.2.37
contig_1	Pyrodigal	gene	362919	364316	.	-	.	ID=GCA000153685_00316_gene;locus_tag=GCA000153685_00316
contig_1	Pyrodigal	CDS	362919	364316	.	-	0	ID=GCA000153685_00316;Name=Sulfatase;locus_tag=GCA000153685_00316;product=Sulfatase;Parent=GCA000153685_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401544.1,SO:0001217,UniParc:UPI00000D4FBC,UniRef:UniRef100_A5TZ23,UniRef:UniRef50_L7V5E1,UniRef:UniRef90_A5TZ23
contig_1	Pyrodigal	gene	364495	366270	.	+	.	ID=GCA000153685_00317_gene;locus_tag=GCA000153685_00317;gene=pE_PGRS5
contig_1	Pyrodigal	CDS	364495	366270	.	+	0	ID=GCA000153685_00317;Name=PE-PGRS family protein PE_PGRS5;locus_tag=GCA000153685_00317;product=PE-PGRS family protein PE_PGRS5;Dbxref=GO:0044165;gene=pE_PGRS5;Parent=GCA000153685_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886074.1,SO:0001217,UniParc:UPI00000C1583,UniRef:UniRef100_Q6MX50,UniRef:UniRef50_Q6MX50,UniRef:UniRef90_Q6MX50
contig_1	Pyrodigal	gene	366413	366640	.	+	.	ID=GCA000153685_00318_gene;locus_tag=GCA000153685_00318
contig_1	Pyrodigal	CDS	366413	366640	.	+	0	ID=GCA000153685_00318;Name=Antitoxin Rv0298;locus_tag=GCA000153685_00318;product=Antitoxin Rv0298;Dbxref=GO:0006355,GO:0045927;Parent=GCA000153685_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401555.1,SO:0001217,UniParc:UPI00000D5F3A,UniRef:UniRef100_P9WJ09,UniRef:UniRef50_P9WJ09,UniRef:UniRef90_P9WJ09
contig_1	Pyrodigal	gene	366637	366939	.	+	.	ID=GCA000153685_00319_gene;locus_tag=GCA000153685_00319
contig_1	Pyrodigal	CDS	366637	366939	.	+	0	ID=GCA000153685_00319;Name=Toxin Rv0299;locus_tag=GCA000153685_00319;product=Toxin Rv0299;Dbxref=GO:0045926;Parent=GCA000153685_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401560.1,SO:0001217,UniParc:UPI00000CCB2D,UniRef:UniRef100_O07226,UniRef:UniRef50_O07226,UniRef:UniRef90_O07226
contig_1	Pyrodigal	gene	366987	367208	.	+	.	ID=GCA000153685_00320_gene;locus_tag=GCA000153685_00320;gene=vapB2
contig_1	Pyrodigal	CDS	366987	367208	.	+	0	ID=GCA000153685_00320;Name=type II toxin-antitoxin system antitoxin VapB2;locus_tag=GCA000153685_00320;product=type II toxin-antitoxin system antitoxin VapB2;Dbxref=GO:0006355,GO:0097351,GO:1990748;gene=vapB2;Parent=GCA000153685_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401563,RefSeq:WP_003401563.1,SO:0001217,UniParc:UPI00000CCB2E,UniRef:UniRef100_O07227,UniRef:UniRef50_O07227,UniRef:UniRef90_O07227
contig_1	Pyrodigal	gene	367205	367630	.	+	.	ID=GCA000153685_00321_gene;locus_tag=GCA000153685_00321;gene=vapC2
contig_1	Pyrodigal	CDS	367205	367630	.	+	0	ID=GCA000153685_00321;Name=Ribonuclease VapC2;locus_tag=GCA000153685_00321;product=Ribonuclease VapC2;Dbxref=GO:0000287,GO:0004540,GO:0017148;gene=vapC2;Parent=GCA000153685_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401566.1,SO:0001217,UniParc:UPI00000D11D0,UniRef:UniRef100_P9WFB9,UniRef:UniRef50_P9WFB9,UniRef:UniRef90_P9WFB9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	367766	368398	.	+	.	ID=GCA000153685_00322_gene;locus_tag=GCA000153685_00322;gene=tetR
contig_1	Pyrodigal	CDS	367766	368398	.	+	0	ID=GCA000153685_00322;Name=TetR family transcriptional regulator;locus_tag=GCA000153685_00322;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000153685_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401571.1,SO:0001217,UniParc:UPI00000D5EC2,UniRef:UniRef100_A0A0H3L567,UniRef:UniRef50_A0AAI8TWE2,UniRef:UniRef90_A0A655IZZ1
contig_1	Pyrodigal	gene	368395	369303	.	+	.	ID=GCA000153685_00323_gene;locus_tag=GCA000153685_00323
contig_1	Pyrodigal	CDS	368395	369303	.	+	0	ID=GCA000153685_00323;Name=Short-chain type dehydrogenase/reductase;locus_tag=GCA000153685_00323;product=Short-chain type dehydrogenase/reductase;Parent=GCA000153685_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900117.1,SO:0001217,UniParc:UPI00000D5F3E,UniRef:UniRef100_A5TZ30,UniRef:UniRef50_L0IYX5,UniRef:UniRef90_A5TZ30
contig_1	Pyrodigal	gene	369311	378871	.	-	.	ID=GCA000153685_00324_gene;locus_tag=GCA000153685_00324
contig_1	Pyrodigal	CDS	369311	378871	.	-	0	ID=GCA000153685_00324;Name=PPE family protein;locus_tag=GCA000153685_00324;product=PPE family protein;Parent=GCA000153685_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900118.1,SO:0001217,UniParc:UPI00000D2B50,UniRef:UniRef100_A0A0H3L962,UniRef:UniRef50_A0A655ARH4,UniRef:UniRef90_A0A0H3L962
contig_1	Pyrodigal	gene	379074	379745	.	+	.	ID=GCA000153685_00325_gene;locus_tag=GCA000153685_00325;gene=bluB
contig_1	Pyrodigal	CDS	379074	379745	.	+	0	ID=GCA000153685_00325;Name=5%2C6-dimethylbenzimidazole synthase;locus_tag=GCA000153685_00325;product=5%2C6-dimethylbenzimidazole synthase;Dbxref=GO:0009236,GO:0016722,GO:0032363;gene=bluB;Parent=GCA000153685_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04719,RefSeq:WP_003401584.1,SO:0001217,UniParc:UPI00000D5F4C,UniRef:UniRef100_O07233,UniRef:UniRef50_A0A5S9N5S2,UniRef:UniRef90_O07233;ec_number=1.13.11.79
contig_1	Pyrodigal	gene	379733	380215	.	-	.	ID=GCA000153685_00326_gene;locus_tag=GCA000153685_00326
contig_1	Pyrodigal	CDS	379733	380215	.	-	0	ID=GCA000153685_00326;Name=Acetoacetate decarboxylase;locus_tag=GCA000153685_00326;product=Acetoacetate decarboxylase;Parent=GCA000153685_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401589.1,SO:0001217,UniParc:UPI00000D11D9,UniRef:UniRef100_O07234,UniRef:UniRef50_O07234,UniRef:UniRef90_O07234
contig_1	Pyrodigal	gene	380273	380989	.	+	.	ID=GCA000153685_00327_gene;locus_tag=GCA000153685_00327
contig_1	Pyrodigal	CDS	380273	380989	.	+	0	ID=GCA000153685_00327;Name=Conserved integral membrane protein;locus_tag=GCA000153685_00327;product=Conserved integral membrane protein;Parent=GCA000153685_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401594.1,SO:0001217,UniParc:UPI00000D5E21,UniRef:UniRef100_A5TZ35,UniRef:UniRef50_A0A1A3KW58,UniRef:UniRef90_A5TZ35
contig_1	Pyrodigal	gene	381091	381747	.	+	.	ID=GCA000153685_00328_gene;locus_tag=GCA000153685_00328
contig_1	Pyrodigal	CDS	381091	381747	.	+	0	ID=GCA000153685_00328;Name=putative conserved exported protein;locus_tag=GCA000153685_00328;product=putative conserved exported protein;Parent=GCA000153685_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401597.1,SO:0001217,UniParc:UPI0000031943,UniRef:UniRef100_O07236,UniRef:UniRef50_O07236,UniRef:UniRef90_O07236
contig_1	Pyrodigal	gene	381817	382308	.	-	.	ID=GCA000153685_00329_gene;locus_tag=GCA000153685_00329
contig_1	Pyrodigal	CDS	381817	382308	.	-	0	ID=GCA000153685_00329;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_00329;product=SnoaL-like domain-containing protein;Parent=GCA000153685_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401601.1,SO:0001217,UniParc:UPI00000D5E12,UniRef:UniRef100_O07237,UniRef:UniRef50_A0A448IFS4,UniRef:UniRef90_A0A0H3L966
contig_1	Pyrodigal	gene	382332	383561	.	+	.	ID=GCA000153685_00330_gene;locus_tag=GCA000153685_00330
contig_1	Pyrodigal	CDS	382332	383561	.	+	0	ID=GCA000153685_00330;Name=DUF222 domain-containing protein;locus_tag=GCA000153685_00330;product=DUF222 domain-containing protein;Parent=GCA000153685_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898398.1,SO:0001217,UniParc:UPI00000D116B,UniRef:UniRef100_O07238,UniRef:UniRef50_A0A417XVN4,UniRef:UniRef90_O07238
contig_1	Pyrodigal	gene	383716	385578	.	+	.	ID=GCA000153685_00331_gene;locus_tag=GCA000153685_00331
contig_1	Pyrodigal	CDS	383716	385578	.	+	0	ID=GCA000153685_00331;Name=Hsp70 family protein;locus_tag=GCA000153685_00331;product=Hsp70 family protein;Parent=GCA000153685_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900119.1,SO:0001217,UniParc:UPI00000D10D7,UniRef:UniRef100_A0A0H3LBZ9,UniRef:UniRef50_A0A0H3LBZ9,UniRef:UniRef90_A0A0H3LBZ9
contig_1	Pyrodigal	gene	385650	386036	.	+	.	ID=GCA000153685_00332_gene;locus_tag=GCA000153685_00332
contig_1	Pyrodigal	CDS	385650	386036	.	+	0	ID=GCA000153685_00332;Name=putative protein Rv0313;locus_tag=GCA000153685_00332;product=putative protein Rv0313;Parent=GCA000153685_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401613.1,SO:0001217,UniParc:UPI00000D10EF,UniRef:UniRef100_P9WL03,UniRef:UniRef50_P9WL03,UniRef:UniRef90_P9WL03
contig_1	Pyrodigal	gene	386039	386701	.	-	.	ID=GCA000153685_00333_gene;locus_tag=GCA000153685_00333
contig_1	Pyrodigal	CDS	386039	386701	.	-	0	ID=GCA000153685_00333;Name=DUF3060 domain-containing protein;locus_tag=GCA000153685_00333;product=DUF3060 domain-containing protein;Parent=GCA000153685_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401619.1,SO:0001217,UniParc:UPI00000C14DD,UniRef:UniRef100_O07241,UniRef:UniRef50_Q73TB6,UniRef:UniRef90_R4LRQ7
contig_1	Pyrodigal	gene	386792	387646	.	+	.	ID=GCA000153685_00334_gene;locus_tag=GCA000153685_00334
contig_1	Pyrodigal	CDS	386792	387646	.	+	0	ID=GCA000153685_00334;Name=putative beta-1%2C3-glucanase;locus_tag=GCA000153685_00334;product=putative beta-1%2C3-glucanase;Parent=GCA000153685_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3AD,UniRef:UniRef100_A0A679LB10,UniRef:UniRef50_A0A3S4BBU9,UniRef:UniRef90_O07242
contig_1	Pyrodigal	gene	387695	388309	.	+	.	ID=GCA000153685_00335_gene;locus_tag=GCA000153685_00335
contig_1	Pyrodigal	CDS	387695	388309	.	+	0	ID=GCA000153685_00335;Name=putative muconolactone isomerase;locus_tag=GCA000153685_00335;product=putative muconolactone isomerase;Parent=GCA000153685_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03464,RefSeq:WP_003401623.1,SO:0001217,UniParc:UPI00000D5F7D,UniRef:UniRef100_O07243,UniRef:UniRef50_A0A498QJH9,UniRef:UniRef90_O07243;ec_number=5.3.3.4
contig_1	Pyrodigal	gene	388333	389070	.	-	.	ID=GCA000153685_00336_gene;locus_tag=GCA000153685_00336;gene=glpQ2
contig_1	Pyrodigal	CDS	388333	389070	.	-	0	ID=GCA000153685_00336;Name=putative glycerophosphodiester phosphodiesterase 2;locus_tag=GCA000153685_00336;product=putative glycerophosphodiester phosphodiesterase 2;Dbxref=GO:0006629,GO:0008081,GO:0046872;gene=glpQ2;Parent=GCA000153685_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01126,SO:0001217,UniParc:UPI0000164F5D,UniRef:UniRef100_O07244,UniRef:UniRef50_O07244,UniRef:UniRef90_O07244;ec_number=3.1.4.46
contig_1	tRNAscan-SE	gene	389364	389434	.	-	.	ID=GCA000153685_00337_gene;locus_tag=GCA000153685_00337;gene=trnG
contig_1	tRNAscan-SE	tRNA	389364	389434	.	-	.	ID=GCA000153685_00337;Name=tRNA-Gly(ccc);locus_tag=GCA000153685_00337;product=tRNA-Gly(ccc);gene=trnG;anti_codon=ccc;amino_acid=Gly;Parent=GCA000153685_00337_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	389465	390241	.	-	.	ID=GCA000153685_00338_gene;locus_tag=GCA000153685_00338
contig_1	Pyrodigal	CDS	389465	390241	.	-	0	ID=GCA000153685_00338;Name=Integral membrane protein;locus_tag=GCA000153685_00338;product=Integral membrane protein;Parent=GCA000153685_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B55,UniRef:UniRef100_A0A0H3L581,UniRef:UniRef50_A5TZ45,UniRef:UniRef90_A5TZ45
contig_1	Pyrodigal	gene	390308	390976	.	+	.	ID=GCA000153685_00339_gene;locus_tag=GCA000153685_00339;gene=pcp
contig_1	Pyrodigal	CDS	390308	390976	.	+	0	ID=GCA000153685_00339;Name=pyroglutamyl-peptidase I;locus_tag=GCA000153685_00339;product=pyroglutamyl-peptidase I;Dbxref=GO:0005829,GO:0006508,GO:0008234,GO:0016920;gene=pcp;Parent=GCA000153685_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01304,RefSeq:WP_003401632.1,SO:0001217,UniParc:UPI0000131444,UniRef:UniRef100_P9WIJ5,UniRef:UniRef50_P9WIJ5,UniRef:UniRef90_P9WIJ5;ec_number=3.4.19.3
contig_1	Pyrodigal	gene	391048	391710	.	+	.	ID=GCA000153685_00340_gene;locus_tag=GCA000153685_00340
contig_1	Pyrodigal	CDS	391048	391710	.	+	0	ID=GCA000153685_00340;Name=Glycoside hydrolase;locus_tag=GCA000153685_00340;product=Glycoside hydrolase;Parent=GCA000153685_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401636.1,SO:0001217,UniParc:UPI00000D1074,UniRef:UniRef100_O07246,UniRef:UniRef50_A0A447G8Z1,UniRef:UniRef90_A0A0H3L975
contig_1	Pyrodigal	gene	391742	392314	.	+	.	ID=GCA000153685_00341_gene;locus_tag=GCA000153685_00341;gene=dcd
contig_1	Pyrodigal	CDS	391742	392314	.	+	0	ID=GCA000153685_00341;Name=dCTP deaminase;locus_tag=GCA000153685_00341;product=dCTP deaminase;Dbxref=GO:0000166,GO:0004170,GO:0006226,GO:0006229,GO:0008829,GO:0015949,GO:0033973;gene=dcd;Parent=GCA000153685_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01494,RefSeq:WP_003898399.1,SO:0001217,UniParc:UPI0000128F8E,UniRef:UniRef100_P9WP17,UniRef:UniRef50_P9WP17,UniRef:UniRef90_P9WP17;ec_number=3.5.4.30
contig_1	Pyrodigal	gene	392420	393751	.	+	.	ID=GCA000153685_00342_gene;locus_tag=GCA000153685_00342;gene=ugd
contig_1	Pyrodigal	CDS	392420	393751	.	+	0	ID=GCA000153685_00342;Name=UDP-glucose 6-dehydrogenase;locus_tag=GCA000153685_00342;product=UDP-glucose 6-dehydrogenase;gene=ugd;Parent=GCA000153685_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1004,COG:M,RefSeq:WP_003898400.1,SO:0001217,UniParc:UPI00000D112D,UniRef:UniRef100_O07248,UniRef:UniRef50_O07248,UniRef:UniRef90_O07248
contig_1	Pyrodigal	gene	393740	394411	.	-	.	ID=GCA000153685_00343_gene;locus_tag=GCA000153685_00343
contig_1	Pyrodigal	CDS	393740	394411	.	-	0	ID=GCA000153685_00343;Name=GlcNAc-PI de-N-acetylase;locus_tag=GCA000153685_00343;product=GlcNAc-PI de-N-acetylase;Parent=GCA000153685_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401643.1,SO:0001217,UniParc:UPI0000164F5E,UniRef:UniRef100_A0A679LBI9,UniRef:UniRef50_K6W9A9,UniRef:UniRef90_A0A0H3L585
contig_1	Pyrodigal	gene	394512	395192	.	+	.	ID=GCA000153685_00344_gene;locus_tag=GCA000153685_00344
contig_1	Pyrodigal	CDS	394512	395192	.	+	0	ID=GCA000153685_00344;Name=HTH-type transcriptional regulator Rv0324;locus_tag=GCA000153685_00344;product=HTH-type transcriptional regulator Rv0324;Dbxref=GO:0003677,GO:0003700,GO:0004792,GO:0006355,GO:0046677;Parent=GCA000153685_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401648.1,SO:0001217,UniParc:UPI0000164F5F,UniRef:UniRef100_A0A679LBE7,UniRef:UniRef50_O08446,UniRef:UniRef90_O08446
contig_1	Pyrodigal	gene	395199	395423	.	+	.	ID=GCA000153685_00345_gene;locus_tag=GCA000153685_00345
contig_1	Pyrodigal	CDS	395199	395423	.	+	0	ID=GCA000153685_00345;Name=SAM-dependent methyltransferase;locus_tag=GCA000153685_00345;product=SAM-dependent methyltransferase;Parent=GCA000153685_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898401.1,SO:0001217,UniParc:UPI00000D10DF,UniRef:UniRef100_O07250,UniRef:UniRef50_O07250,UniRef:UniRef90_O07250
contig_1	Pyrodigal	gene	395433	395888	.	+	.	ID=GCA000153685_00346_gene;locus_tag=GCA000153685_00346
contig_1	Pyrodigal	CDS	395433	395888	.	+	0	ID=GCA000153685_00346;Name=Methyltransferase domain-containing protein;locus_tag=GCA000153685_00346;product=Methyltransferase domain-containing protein;Parent=GCA000153685_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898402.1,SO:0001217,UniParc:UPI00000D0FF3,UniRef:UniRef100_O07251,UniRef:UniRef50_O07251,UniRef:UniRef90_O07251
contig_1	Pyrodigal	gene	395856	397205	.	-	.	ID=GCA000153685_00347_gene;locus_tag=GCA000153685_00347;gene=cyp135A1
contig_1	Pyrodigal	CDS	395856	397205	.	-	0	ID=GCA000153685_00347;Name=Putative cytochrome P450 135A1;locus_tag=GCA000153685_00347;product=Putative cytochrome P450 135A1;Dbxref=GO:0004497,GO:0005506,GO:0009274,GO:0016491,GO:0016705,GO:0020037;gene=cyp135A1;Parent=GCA000153685_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401650.1,SO:0001217,UniParc:UPI0000126BB8,UniRef:UniRef100_P9WPN1,UniRef:UniRef50_P9WPN1,UniRef:UniRef90_P9WPN1;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	397271	397873	.	+	.	ID=GCA000153685_00348_gene;locus_tag=GCA000153685_00348
contig_1	Pyrodigal	CDS	397271	397873	.	+	0	ID=GCA000153685_00348;Name=putative transcriptional regulatory protein (Possibly TetR/AcrR-family);locus_tag=GCA000153685_00348;product=putative transcriptional regulatory protein (Possibly TetR/AcrR-family);Parent=GCA000153685_00348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401651.1,SO:0001217,UniParc:UPI00000D5F41,UniRef:UniRef100_O07252,UniRef:UniRef50_A0A498QQ12,UniRef:UniRef90_O07252
contig_1	Pyrodigal	gene	397854	398480	.	-	.	ID=GCA000153685_00349_gene;locus_tag=GCA000153685_00349
contig_1	Pyrodigal	CDS	397854	398480	.	-	0	ID=GCA000153685_00349;Name=Methyltransferase type 11 domain-containing protein;locus_tag=GCA000153685_00349;product=Methyltransferase type 11 domain-containing protein;Parent=GCA000153685_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401654.1,SO:0001217,UniParc:UPI00000D5F98,UniRef:UniRef100_O07253,UniRef:UniRef50_A0A498QK30,UniRef:UniRef90_O07253
contig_1	Pyrodigal	gene	398507	399247	.	-	.	ID=GCA000153685_00350_gene;locus_tag=GCA000153685_00350
contig_1	Pyrodigal	CDS	398507	399247	.	-	0	ID=GCA000153685_00350;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_00350;product=HTH tetR-type domain-containing protein;Parent=GCA000153685_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401656.1,SO:0001217,UniParc:UPI00000D5EEA,UniRef:UniRef100_O07254,UniRef:UniRef50_O07254,UniRef:UniRef90_O07254
contig_1	Pyrodigal	gene	399361	400527	.	+	.	ID=GCA000153685_00351_gene;locus_tag=GCA000153685_00351
contig_1	Pyrodigal	CDS	399361	400527	.	+	0	ID=GCA000153685_00351;Name=Dehydrogenase/reductase;locus_tag=GCA000153685_00351;product=Dehydrogenase/reductase;Parent=GCA000153685_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900121.1,SO:0001217,UniParc:UPI0000164F60,UniRef:UniRef100_A0A0H3L5R6,UniRef:UniRef50_A0A1S6J2J2,UniRef:UniRef90_A0A0T7LCN0
contig_1	Pyrodigal	gene	400602	401387	.	+	.	ID=GCA000153685_00352_gene;locus_tag=GCA000153685_00352
contig_1	Pyrodigal	CDS	400602	401387	.	+	0	ID=GCA000153685_00352;Name=Maleylpyruvate isomerase family mycothiol-dependent enzyme;locus_tag=GCA000153685_00352;product=Maleylpyruvate isomerase family mycothiol-dependent enzyme;Parent=GCA000153685_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401662.1,SO:0001217,UniParc:UPI00000C14DF,UniRef:UniRef100_O07256,UniRef:UniRef50_A0A2A7MNW5,UniRef:UniRef90_A0A0H3LC13
contig_1	Pyrodigal	gene	401354	401788	.	+	.	ID=GCA000153685_00353_gene;locus_tag=GCA000153685_00353
contig_1	Pyrodigal	CDS	401354	401788	.	+	0	ID=GCA000153685_00353;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_00353;product=SnoaL-like domain-containing protein;Parent=GCA000153685_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF4851,UniRef:UniRef100_O33273,UniRef:UniRef50_O33273,UniRef:UniRef90_O33273
contig_1	Pyrodigal	gene	401818	402684	.	+	.	ID=GCA000153685_00354_gene;locus_tag=GCA000153685_00354;gene=rfbA
contig_1	Pyrodigal	CDS	401818	402684	.	+	0	ID=GCA000153685_00354;Name=glucose-1-phosphate thymidylyltransferase RfbA;locus_tag=GCA000153685_00354;product=glucose-1-phosphate thymidylyltransferase RfbA;Dbxref=GO:0000271,GO:0000287,GO:0005886,GO:0006006,GO:0008879,GO:0009274,GO:0019305,GO:0045226,GO:0046075;gene=rfbA;Parent=GCA000153685_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1209,COG:M,KEGG:K00973,RefSeq:WP_003401670.1,SO:0001217,UniParc:UPI00000D5F62,UniRef:UniRef100_P9WH13,UniRef:UniRef50_P9WH13,UniRef:UniRef90_P9WH13;ec_number=2.7.7.24
contig_1	Pyrodigal	gene	402647	403258	.	+	.	ID=GCA000153685_00355_gene;locus_tag=GCA000153685_00355
contig_1	Pyrodigal	CDS	402647	403258	.	+	0	ID=GCA000153685_00355;Name=PE family protein PE6;locus_tag=GCA000153685_00355;product=PE family protein PE6;Parent=GCA000153685_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045B9893,UniRef:UniRef100_A0A0E8NSN6,UniRef:UniRef50_A0A0E8NSN6,UniRef:UniRef90_A0A0E8NSN6
contig_1	Pyrodigal	gene	403421	404863	.	+	.	ID=GCA000153685_00356_gene;locus_tag=GCA000153685_00356
contig_1	Pyrodigal	CDS	403421	404863	.	+	0	ID=GCA000153685_00356;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_00356;product=HNH nuclease domain-containing protein;Parent=GCA000153685_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3B6,UniRef:UniRef100_A0AA44LK59,UniRef:UniRef50_A0A051UIA2,UniRef:UniRef90_Q7D9Q7
contig_1	Pyrodigal	gene	405033	406322	.	-	.	ID=GCA000153685_00357_gene;locus_tag=GCA000153685_00357;gene=aspC
contig_1	Pyrodigal	CDS	405033	406322	.	-	0	ID=GCA000153685_00357;Name=Alanine aminotransferase;locus_tag=GCA000153685_00357;product=Alanine aminotransferase;Dbxref=GO:0004021,GO:0005737,GO:0005886,GO:0009058,GO:0030170;gene=aspC;Parent=GCA000153685_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_003401733.1,SO:0001217,UniParc:UPI00001250E9,UniRef:UniRef100_P9WQ91,UniRef:UniRef50_P9WQ91,UniRef:UniRef90_P9WQ91;ec_number=2.6.1.2
contig_1	Pyrodigal	gene	406353	409001	.	-	.	ID=GCA000153685_00358_gene;locus_tag=GCA000153685_00358
contig_1	Pyrodigal	CDS	406353	409001	.	-	0	ID=GCA000153685_00358;Name=Iron-sulfur-binding reductase;locus_tag=GCA000153685_00358;product=Iron-sulfur-binding reductase;Parent=GCA000153685_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08264,RefSeq:WP_003401734.1,SO:0001217,UniParc:UPI00001A8EC0,UniRef:UniRef100_A0A1K3S8I3,UniRef:UniRef50_A0A0H3L5B4,UniRef:UniRef90_A0A0H3L5B4;ec_number=1.8.98.1
contig_1	Pyrodigal	gene	409110	411560	.	-	.	ID=GCA000153685_00359_gene;locus_tag=GCA000153685_00359;gene=iniR
contig_1	Pyrodigal	CDS	409110	411560	.	-	0	ID=GCA000153685_00359;Name=isoniazid response ATPase/transcriptional regulator IniR;locus_tag=GCA000153685_00359;product=isoniazid response ATPase/transcriptional regulator IniR;gene=iniR;Parent=GCA000153685_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912578.1,SO:0001217,UniParc:UPI00005EE3B8,UniRef:UniRef100_A0A0H3L988,UniRef:UniRef50_A0A1X0CYX1,UniRef:UniRef90_O33269
contig_1	Pyrodigal	gene	411794	412333	.	+	.	ID=GCA000153685_00360_gene;locus_tag=GCA000153685_00360
contig_1	Pyrodigal	CDS	411794	412333	.	+	0	ID=GCA000153685_00360;Name=Rv0340 family IniB-related protein;locus_tag=GCA000153685_00360;product=Rv0340 family IniB-related protein;Parent=GCA000153685_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401737.1,SO:0001217,UniParc:UPI00000D0FC2,UniRef:UniRef100_O33270,UniRef:UniRef50_A0A1A6BE01,UniRef:UniRef90_R4LUE0
contig_1	Pyrodigal	gene	412522	413961	.	+	.	ID=GCA000153685_00361_gene;locus_tag=GCA000153685_00361;gene=iniB
contig_1	Pyrodigal	CDS	412522	413961	.	+	0	ID=GCA000153685_00361;Name=isoniazid-induced protein IniB;locus_tag=GCA000153685_00361;product=isoniazid-induced protein IniB;gene=iniB;Parent=GCA000153685_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031726227,RefSeq:WP_003901837.1,SO:0001217,UniParc:UPI00000C1510,UniRef:UniRef100_P9WJ97,UniRef:UniRef50_P9WJ97,UniRef:UniRef90_P9WJ97
contig_1	Pyrodigal	gene	413998	415920	.	+	.	ID=GCA000153685_00362_gene;locus_tag=GCA000153685_00362;gene=iniA
contig_1	Pyrodigal	CDS	413998	415920	.	+	0	ID=GCA000153685_00362;Name=isoniazid-induced protein IniA;locus_tag=GCA000153685_00362;product=isoniazid-induced protein IniA;Dbxref=GO:0005886,GO:0009274,GO:0015562,GO:0046677;gene=iniA;Parent=GCA000153685_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_014876844,BlastRules:WP_015292084,RefSeq:WP_003900124.1,SO:0001217,UniParc:UPI00000D0FB8,UniRef:UniRef100_P9WJ99,UniRef:UniRef50_P9WJ99,UniRef:UniRef90_P9WJ99
contig_1	Pyrodigal	gene	415917	417398	.	+	.	ID=GCA000153685_00363_gene;locus_tag=GCA000153685_00363;gene=iniC
contig_1	Pyrodigal	CDS	415917	417398	.	+	0	ID=GCA000153685_00363;Name=isoniazid-induced protein IniC;locus_tag=GCA000153685_00363;product=isoniazid-induced protein IniC;Dbxref=GO:0005829,GO:0005886;gene=iniC;Parent=GCA000153685_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401747,RefSeq:WP_003401747.1,SO:0001217,UniParc:UPI00000D110F,UniRef:UniRef100_P9WJ95,UniRef:UniRef50_P9WJ95,UniRef:UniRef90_P9WJ95
contig_1	Pyrodigal	gene	417541	418101	.	-	.	ID=GCA000153685_00364_gene;locus_tag=GCA000153685_00364
contig_1	Pyrodigal	CDS	417541	418101	.	-	0	ID=GCA000153685_00364;Name=Lipoprotein LPQJ;locus_tag=GCA000153685_00364;product=Lipoprotein LPQJ;Parent=GCA000153685_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401751.1,SO:0001217,UniParc:UPI00000D6058,UniRef:UniRef100_A5TZ71,UniRef:UniRef50_A0A7I7MTQ5,UniRef:UniRef90_A0A8I0EKH8
contig_1	Pyrodigal	gene	418204	418620	.	+	.	ID=GCA000153685_00365_gene;locus_tag=GCA000153685_00365
contig_1	Pyrodigal	CDS	418204	418620	.	+	0	ID=GCA000153685_00365;Name=MobA-like NTP transferase domain-containing protein;locus_tag=GCA000153685_00365;product=MobA-like NTP transferase domain-containing protein;Parent=GCA000153685_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCAFC,UniRef:UniRef100_A0A0H3LC26,UniRef:UniRef50_O06296,UniRef:UniRef90_O06296
contig_1	Pyrodigal	gene	418662	420125	.	-	.	ID=GCA000153685_00366_gene;locus_tag=GCA000153685_00366;gene=ansP2
contig_1	Pyrodigal	CDS	418662	420125	.	-	0	ID=GCA000153685_00366;Name=L-asparagine permease 2;locus_tag=GCA000153685_00366;product=L-asparagine permease 2;Dbxref=GO:0005576,GO:0005886,GO:0006865,GO:0055085;gene=ansP2;Parent=GCA000153685_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11738,RefSeq:WP_003898409.1,SO:0001217,UniParc:UPI0000139669,UniRef:UniRef100_P9WQM7,UniRef:UniRef50_P9WQM7,UniRef:UniRef90_P9WQM7
contig_1	Pyrodigal	gene	420638	421450	.	+	.	ID=GCA000153685_00367_gene;locus_tag=GCA000153685_00367
contig_1	Pyrodigal	CDS	420638	421450	.	+	0	ID=GCA000153685_00367;Name=TIGR04255 family protein;locus_tag=GCA000153685_00367;product=TIGR04255 family protein;Parent=GCA000153685_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911187.1,SO:0001217,UniParc:UPI00005EE3BC,UniRef:UniRef100_A0A0H3L997,UniRef:UniRef50_R4M3K5,UniRef:UniRef90_R4M3K5
contig_1	Pyrodigal	gene	421453	422106	.	+	.	ID=GCA000153685_00368_gene;locus_tag=GCA000153685_00368;gene=mosR
contig_1	Pyrodigal	CDS	421453	422106	.	+	0	ID=GCA000153685_00368;Name=hypoxia/intracellular survival transcriptional regulator MosR;locus_tag=GCA000153685_00368;product=hypoxia/intracellular survival transcriptional regulator MosR;gene=mosR;Parent=GCA000153685_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401756,RefSeq:WP_003401756.1,SO:0001217,UniParc:UPI00000D0F6F,UniRef:UniRef100_O06299,UniRef:UniRef50_R4LYS9,UniRef:UniRef90_R4LYS9
contig_1	Pyrodigal	gene	422109	422768	.	+	.	ID=GCA000153685_00369_gene;locus_tag=GCA000153685_00369
contig_1	Pyrodigal	CDS	422109	422768	.	+	0	ID=GCA000153685_00369;Name=hypothetical protein;locus_tag=GCA000153685_00369;product=hypothetical protein;Parent=GCA000153685_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900125.1,SO:0001217,UniParc:UPI00000CCAFD,UniRef:UniRef100_O06300,UniRef:UniRef50_O06300,UniRef:UniRef90_O06300
contig_1	Pyrodigal	gene	422995	424872	.	+	.	ID=GCA000153685_00370_gene;locus_tag=GCA000153685_00370;gene=dnaK
contig_1	Pyrodigal	CDS	422995	424872	.	+	0	ID=GCA000153685_00370;Name=molecular chaperone DnaK;locus_tag=GCA000153685_00370;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=dnaK;Parent=GCA000153685_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_003401814.1,SO:0001217,UniParc:UPI000004A4BA,UniRef:UniRef100_P9WMJ9,UniRef:UniRef50_P9WMJ9,UniRef:UniRef90_P9WMJ9
contig_1	Pyrodigal	gene	424869	425576	.	+	.	ID=GCA000153685_00371_gene;locus_tag=GCA000153685_00371;gene=grpE
contig_1	Pyrodigal	CDS	424869	425576	.	+	0	ID=GCA000153685_00371;Name=nucleotide exchange factor GrpE;locus_tag=GCA000153685_00371;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005737,GO:0006457,GO:0009267,GO:0009274,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000153685_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03687,RefSeq:WP_003401817.1,SO:0001217,UniParc:UPI000012BB33,UniRef:UniRef100_P9WMT5,UniRef:UniRef50_P9WMT5,UniRef:UniRef90_P9WMT5
contig_1	Pyrodigal	gene	425612	426799	.	+	.	ID=GCA000153685_00372_gene;locus_tag=GCA000153685_00372;gene=dnaJ
contig_1	Pyrodigal	CDS	425612	426799	.	+	0	ID=GCA000153685_00372;Name=molecular chaperone DnaJ;locus_tag=GCA000153685_00372;product=molecular chaperone DnaJ;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0006260,GO:0008270,GO:0009274,GO:0009408,GO:0010468,GO:0031072,GO:0042026,GO:0051082,GO:0051085,GO:0061077;gene=dnaJ;Parent=GCA000153685_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401821.1,SO:0001217,UniParc:UPI000012958C,UniRef:UniRef100_P9WNV9,UniRef:UniRef50_P9WNV9,UniRef:UniRef90_P9WNV9
contig_1	Pyrodigal	gene	426799	427179	.	+	.	ID=GCA000153685_00373_gene;locus_tag=GCA000153685_00373;gene=hspR
contig_1	Pyrodigal	CDS	426799	427179	.	+	0	ID=GCA000153685_00373;Name=heat shock transcriptional regulator HspR;locus_tag=GCA000153685_00373;product=heat shock transcriptional regulator HspR;Dbxref=GO:0003700,GO:0006355;gene=hspR;Parent=GCA000153685_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002853230,BlastRules:WP_003401823,KEGG:K13640,RefSeq:WP_003401823.1,SO:0001217,UniParc:UPI00000D0FD9,UniRef:UniRef100_A5TZ80,UniRef:UniRef50_G7GUG0,UniRef:UniRef90_A5TZ80
contig_1	Pyrodigal	gene	427304	427855	.	-	.	ID=GCA000153685_00374_gene;locus_tag=GCA000153685_00374
contig_1	Pyrodigal	CDS	427304	427855	.	-	0	ID=GCA000153685_00374;Name=PPE family protein;locus_tag=GCA000153685_00374;product=PPE family protein;Parent=GCA000153685_00374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898412.1,SO:0001217,UniParc:UPI00005EE3BE,UniRef:UniRef100_A0A0E8U6V6,UniRef:UniRef50_A0A9N7LNN3,UniRef:UniRef90_A0A0E8U6V6
contig_1	Pyrodigal	gene	427938	437825	.	-	.	ID=GCA000153685_00375_gene;locus_tag=GCA000153685_00375
contig_1	Pyrodigal	CDS	427938	437825	.	-	0	ID=GCA000153685_00375;Name=PPE family protein;locus_tag=GCA000153685_00375;product=PPE family protein;Parent=GCA000153685_00375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900127.1,SO:0001217,UniParc:UPI0001277F9A,UniRef:UniRef100_A0A0H3L5D2,UniRef:UniRef50_A0A1X0FNQ8,UniRef:UniRef90_A0A829C8L2
contig_1	Pyrodigal	gene	437976	438620	.	-	.	ID=GCA000153685_00376_gene;locus_tag=GCA000153685_00376
contig_1	Pyrodigal	CDS	437976	438620	.	-	0	ID=GCA000153685_00376;Name=Acyl-coenzyme A thioesterase THEM4;locus_tag=GCA000153685_00376;product=Acyl-coenzyme A thioesterase THEM4;Parent=GCA000153685_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401827.1,SO:0001217,UniParc:UPI00000CCAFE,UniRef:UniRef100_O06307,UniRef:UniRef50_O06307,UniRef:UniRef90_O06307
contig_1	Pyrodigal	gene	438617	439915	.	-	.	ID=GCA000153685_00377_gene;locus_tag=GCA000153685_00377;gene=purA
contig_1	Pyrodigal	CDS	438617	439915	.	-	0	ID=GCA000153685_00377;Name=adenylosuccinate synthase;locus_tag=GCA000153685_00377;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040;gene=purA;Parent=GCA000153685_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_003401829.1,SO:0001217,UniParc:UPI0000132AFD,UniRef:UniRef100_P9WHN3,UniRef:UniRef50_A0QQH7,UniRef:UniRef90_P9WHN3;ec_number=6.3.4.4
contig_1	Pyrodigal	gene	440006	440653	.	+	.	ID=GCA000153685_00378_gene;locus_tag=GCA000153685_00378
contig_1	Pyrodigal	CDS	440006	440653	.	+	0	ID=GCA000153685_00378;Name=Peptidase M50;locus_tag=GCA000153685_00378;product=Peptidase M50;Parent=GCA000153685_00378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401831.1,SO:0001217,UniParc:UPI00000D1134,UniRef:UniRef100_O06308,UniRef:UniRef50_A0A7I9XPJ3,UniRef:UniRef90_R4M4X3
contig_1	Pyrodigal	gene	440664	441443	.	+	.	ID=GCA000153685_00379_gene;locus_tag=GCA000153685_00379;gene=rip2
contig_1	Pyrodigal	CDS	440664	441443	.	+	0	ID=GCA000153685_00379;Name=Putative zinc metalloprotease Rip2;locus_tag=GCA000153685_00379;product=Putative zinc metalloprotease Rip2;Dbxref=GO:0005886,GO:0006508,GO:0008237,GO:0046872;gene=rip2;Parent=GCA000153685_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900129.1,SO:0001217,UniParc:UPI0001277F9C,UniRef:UniRef100_H8EVJ1,UniRef:UniRef50_A0QQH5,UniRef:UniRef90_H8EVJ1
contig_1	Pyrodigal	gene	441448	441852	.	-	.	ID=GCA000153685_00380_gene;locus_tag=GCA000153685_00380
contig_1	Pyrodigal	CDS	441448	441852	.	-	0	ID=GCA000153685_00380;Name=DUF3151 domain-containing protein;locus_tag=GCA000153685_00380;product=DUF3151 domain-containing protein;Parent=GCA000153685_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3C0,UniRef:UniRef100_O06310,UniRef:UniRef50_D6Z7Z8,UniRef:UniRef90_R4MEA4
contig_1	Pyrodigal	gene	441968	442795	.	+	.	ID=GCA000153685_00381_gene;locus_tag=GCA000153685_00381
contig_1	Pyrodigal	CDS	441968	442795	.	+	0	ID=GCA000153685_00381;Name=DUF4878 domain-containing protein;locus_tag=GCA000153685_00381;product=DUF4878 domain-containing protein;Parent=GCA000153685_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401853.1,SO:0001217,UniParc:UPI00000D0F97,UniRef:UniRef100_A5TZ88,UniRef:UniRef50_A5TZ88,UniRef:UniRef90_A5TZ88
contig_1	Pyrodigal	gene	443017	444399	.	+	.	ID=GCA000153685_00382_gene;locus_tag=GCA000153685_00382;gene=mgtE
contig_1	Pyrodigal	CDS	443017	444399	.	+	0	ID=GCA000153685_00382;Name=magnesium transporter;locus_tag=GCA000153685_00382;product=magnesium transporter;Dbxref=GO:0015095,GO:0015693,GO:0016020;gene=mgtE;Parent=GCA000153685_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898415.1,SO:0001217,UniParc:UPI00000D5ECA,UniRef:UniRef100_O06312,UniRef:UniRef50_A0A2I7W3F4,UniRef:UniRef90_A0A2I7W3F4
contig_1	Pyrodigal	gene	444411	445445	.	-	.	ID=GCA000153685_00383_gene;locus_tag=GCA000153685_00383;gene=fbaA
contig_1	Pyrodigal	CDS	444411	445445	.	-	0	ID=GCA000153685_00383;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000153685_00383;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0005576,GO:0005829,GO:0005886,GO:0006096,GO:0008270,GO:0009274,GO:0035375;gene=fbaA;Parent=GCA000153685_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01624,RefSeq:WP_003401856.1,SO:0001217,UniParc:UPI0000125821,UniRef:UniRef100_P9WQA3,UniRef:UniRef50_P9WQA3,UniRef:UniRef90_P9WQA3;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	445541	446224	.	+	.	ID=GCA000153685_00384_gene;locus_tag=GCA000153685_00384
contig_1	Pyrodigal	CDS	445541	446224	.	+	0	ID=GCA000153685_00384;Name=putative membrane protein Rv0364;locus_tag=GCA000153685_00384;product=putative membrane protein Rv0364;Dbxref=GO:0005886;Parent=GCA000153685_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03975,RefSeq:WP_003401857.1,SO:0001217,UniParc:UPI00001396BF,UniRef:UniRef100_P9WP09,UniRef:UniRef50_P9WP09,UniRef:UniRef90_P9WP09
contig_1	Pyrodigal	gene	446213	447343	.	-	.	ID=GCA000153685_00385_gene;locus_tag=GCA000153685_00385
contig_1	Pyrodigal	CDS	446213	447343	.	-	0	ID=GCA000153685_00385;Name=Conserved protein;locus_tag=GCA000153685_00385;product=Conserved protein;Parent=GCA000153685_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900130.1,SO:0001217,UniParc:UPI0001277F9D,UniRef:UniRef100_A0A0H3L5E2,UniRef:UniRef50_O06315,UniRef:UniRef90_O06315
contig_1	Pyrodigal	gene	447368	447961	.	-	.	ID=GCA000153685_00386_gene;locus_tag=GCA000153685_00386
contig_1	Pyrodigal	CDS	447368	447961	.	-	0	ID=GCA000153685_00386;Name=Zeta toxin domain-containing protein;locus_tag=GCA000153685_00386;product=Zeta toxin domain-containing protein;Parent=GCA000153685_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401859.1,SO:0001217,UniParc:UPI00000D115B,UniRef:UniRef100_O53701,UniRef:UniRef50_O53701,UniRef:UniRef90_O53701
contig_1	Pyrodigal	gene	447990	448379	.	-	.	ID=GCA000153685_00387_gene;locus_tag=GCA000153685_00387
contig_1	Pyrodigal	CDS	447990	448379	.	-	0	ID=GCA000153685_00387;Name=ParD-like antitoxin of type II toxin-antitoxin system;locus_tag=GCA000153685_00387;product=ParD-like antitoxin of type II toxin-antitoxin system;Parent=GCA000153685_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401860.1,SO:0001217,UniParc:UPI00000C1549,UniRef:UniRef100_O53702,UniRef:UniRef50_A0A7I7L3A2,UniRef:UniRef90_O53702
contig_1	Pyrodigal	gene	448460	449680	.	-	.	ID=GCA000153685_00388_gene;locus_tag=GCA000153685_00388
contig_1	Pyrodigal	CDS	448460	449680	.	-	0	ID=GCA000153685_00388;Name=VWFA domain-containing protein;locus_tag=GCA000153685_00388;product=VWFA domain-containing protein;Parent=GCA000153685_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07161,SO:0001217,UniParc:UPI0005E4B7EE,UniRef:UniRef100_A0A0H3LC51,UniRef:UniRef50_O53703,UniRef:UniRef90_O53703
contig_1	Pyrodigal	gene	449677	450279	.	-	.	ID=GCA000153685_00389_gene;locus_tag=GCA000153685_00389
contig_1	Pyrodigal	CDS	449677	450279	.	-	0	ID=GCA000153685_00389;Name=putative membrane oxidoreductase;locus_tag=GCA000153685_00389;product=putative membrane oxidoreductase;Parent=GCA000153685_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898417.1,SO:0001217,UniParc:UPI00000CCB8C,UniRef:UniRef100_O53704,UniRef:UniRef50_X0PSQ5,UniRef:UniRef90_O53704
contig_1	Pyrodigal	gene	450293	451189	.	-	.	ID=GCA000153685_00390_gene;locus_tag=GCA000153685_00390
contig_1	Pyrodigal	CDS	450293	451189	.	-	0	ID=GCA000153685_00390;Name=putative oxidoreductase;locus_tag=GCA000153685_00390;product=putative oxidoreductase;Parent=GCA000153685_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898418.1,SO:0001217,UniParc:UPI00000D1003,UniRef:UniRef100_O53705,UniRef:UniRef50_A0A378TIL3,UniRef:UniRef90_O53705
contig_1	Pyrodigal	gene	451186	451779	.	-	.	ID=GCA000153685_00391_gene;locus_tag=GCA000153685_00391
contig_1	Pyrodigal	CDS	451186	451779	.	-	0	ID=GCA000153685_00391;Name=MobA-like NTP transferase domain-containing protein;locus_tag=GCA000153685_00391;product=MobA-like NTP transferase domain-containing protein;Parent=GCA000153685_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07141,RefSeq:WP_003900132.1,SO:0001217,UniParc:UPI0001277FAF,UniRef:UniRef100_UPI0001277FAF,UniRef:UniRef50_A0A7G1IL22,UniRef:UniRef90_I6WY86;ec_number=2.7.7.76
contig_1	Pyrodigal	gene	451776	452531	.	-	.	ID=GCA000153685_00392_gene;locus_tag=GCA000153685_00392
contig_1	Pyrodigal	CDS	451776	452531	.	-	0	ID=GCA000153685_00392;Name=Carbon monoxide dehydrogenase;locus_tag=GCA000153685_00392;product=Carbon monoxide dehydrogenase;Parent=GCA000153685_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07402,RefSeq:WP_003401865.1,SO:0001217,UniParc:UPI00000D103D,UniRef:UniRef100_O53707,UniRef:UniRef50_A0A100XFY6,UniRef:UniRef90_O53707
contig_1	Pyrodigal	gene	452550	454949	.	-	.	ID=GCA000153685_00393_gene;locus_tag=GCA000153685_00393;gene=coxL
contig_1	Pyrodigal	CDS	452550	454949	.	-	0	ID=GCA000153685_00393;Name=aerobic carbon-monoxide dehydrogenase large subunit;locus_tag=GCA000153685_00393;product=aerobic carbon-monoxide dehydrogenase large subunit;Dbxref=GO:0005507,GO:0030151,GO:0043885;gene=coxL;Parent=GCA000153685_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1529,KEGG:K03520,RefSeq:WP_003900133.1,SO:0001217,UniParc:UPI00000D5EFB,UniRef:UniRef100_A5TZA0,UniRef:UniRef50_A0A498QML3,UniRef:UniRef90_A0A498QML3;ec_number=1.2.5.3
contig_1	Pyrodigal	gene	454946	455425	.	-	.	ID=GCA000153685_00394_gene;locus_tag=GCA000153685_00394
contig_1	Pyrodigal	CDS	454946	455425	.	-	0	ID=GCA000153685_00394;Name=Carbon monoxide dehydrogenase small chain;locus_tag=GCA000153685_00394;product=Carbon monoxide dehydrogenase small chain;Parent=GCA000153685_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401867.1,SO:0001217,UniParc:UPI00000D5F67,UniRef:UniRef100_A5TZA1,UniRef:UniRef50_P19921,UniRef:UniRef90_A0A7Z7IGH0
contig_1	Pyrodigal	gene	455440	456342	.	-	.	ID=GCA000153685_00395_gene;locus_tag=GCA000153685_00395
contig_1	Pyrodigal	CDS	455440	456342	.	-	0	ID=GCA000153685_00395;Name=Carbon monoxide dehydrogenase medium subunit;locus_tag=GCA000153685_00395;product=Carbon monoxide dehydrogenase medium subunit;Parent=GCA000153685_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898419.1,SO:0001217,UniParc:UPI00000D4FBD,UniRef:UniRef100_A0A0H3L5F2,UniRef:UniRef50_A0A358SQN6,UniRef:UniRef90_R4MD16
contig_1	Pyrodigal	gene	456376	457518	.	-	.	ID=GCA000153685_00396_gene;locus_tag=GCA000153685_00396
contig_1	Pyrodigal	CDS	456376	457518	.	-	0	ID=GCA000153685_00396;Name=XshC-Cox1 family protein;locus_tag=GCA000153685_00396;product=XshC-Cox1 family protein;Parent=GCA000153685_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07402,SO:0001217,UniParc:UPI0002A81F34,UniRef:UniRef100_A0A0H3L9C4,UniRef:UniRef50_L8DGP1,UniRef:UniRef90_O53711
contig_1	Pyrodigal	gene	457567	458532	.	+	.	ID=GCA000153685_00397_gene;locus_tag=GCA000153685_00397;gene=lysR
contig_1	Pyrodigal	CDS	457567	458532	.	+	0	ID=GCA000153685_00397;Name=putative HTH-type transcriptional regulator Rv0377;locus_tag=GCA000153685_00397;product=putative HTH-type transcriptional regulator Rv0377;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=lysR;Parent=GCA000153685_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_003898421.1,SO:0001217,UniParc:UPI00001396F2,UniRef:UniRef100_P9WMF7,UniRef:UniRef50_P9WMF7,UniRef:UniRef90_P9WMF7
contig_1	Pyrodigal	gene	458780	459004	.	+	.	ID=GCA000153685_00398_gene;locus_tag=GCA000153685_00398
contig_1	Pyrodigal	CDS	458780	459004	.	+	0	ID=GCA000153685_00398;Name=PE-PGRS family protein;locus_tag=GCA000153685_00398;product=PE-PGRS family protein;Parent=GCA000153685_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61E56,UniRef:UniRef100_A0A0U0R0K9,UniRef:UniRef50_A5TZA5,UniRef:UniRef90_A5TZA5
contig_1	Pyrodigal	gene	459123	459338	.	+	.	ID=GCA000153685_00399_gene;locus_tag=GCA000153685_00399;gene=secE2
contig_1	Pyrodigal	CDS	459123	459338	.	+	0	ID=GCA000153685_00399;Name=calcium dodecin;locus_tag=GCA000153685_00399;product=calcium dodecin;Dbxref=GO:0005886,GO:0009274,GO:0046872;gene=secE2;Parent=GCA000153685_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401885,COG:COG3360,COG:R,RefSeq:WP_003401885.1,SO:0001217,UniParc:UPI00000D3AF5,UniRef:UniRef100_Q6MX43,UniRef:UniRef50_Q6MX43,UniRef:UniRef90_Q6MX43
contig_1	Pyrodigal	gene	459414	460064	.	-	.	ID=GCA000153685_00400_gene;locus_tag=GCA000153685_00400
contig_1	Pyrodigal	CDS	459414	460064	.	-	0	ID=GCA000153685_00400;Name=RNA methyltransferase;locus_tag=GCA000153685_00400;product=RNA methyltransferase;Parent=GCA000153685_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031655464.1,SO:0001217,UniParc:UPI0004F34226,UniRef:UniRef100_A0A0E9ATE0,UniRef:UniRef50_J0D520,UniRef:UniRef90_A0A655JKJ7
contig_1	Pyrodigal	gene	460061	460969	.	-	.	ID=GCA000153685_00401_gene;locus_tag=GCA000153685_00401
contig_1	Pyrodigal	CDS	460061	460969	.	-	0	ID=GCA000153685_00401;Name=Lipoprotein;locus_tag=GCA000153685_00401;product=Lipoprotein;Parent=GCA000153685_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401890.1,SO:0001217,UniParc:UPI00000C154C,UniRef:UniRef100_O53716,UniRef:UniRef50_A0A1A2J1H2,UniRef:UniRef90_O53716
contig_1	Pyrodigal	gene	460987	461526	.	-	.	ID=GCA000153685_00402_gene;locus_tag=GCA000153685_00402;gene=pyrE
contig_1	Pyrodigal	CDS	460987	461526	.	-	0	ID=GCA000153685_00402;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000153685_00402;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0006222,GO:0019856,GO:0044205;gene=pyrE;Parent=GCA000153685_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401894.1,SO:0001217,UniParc:UPI0000132CC9,UniRef:UniRef100_P9WHK9,UniRef:UniRef50_P9WHK9,UniRef:UniRef90_P9WHK9;ec_number=2.4.2.10
contig_1	Pyrodigal	gene	461607	462461	.	-	.	ID=GCA000153685_00403_gene;locus_tag=GCA000153685_00403;gene=ttfA
contig_1	Pyrodigal	CDS	461607	462461	.	-	0	ID=GCA000153685_00403;Name=trehalose monomycolate transport factor TtfA;locus_tag=GCA000153685_00403;product=trehalose monomycolate transport factor TtfA;Dbxref=GO:0071555;gene=ttfA;Parent=GCA000153685_00403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401897.1,SO:0001217,UniParc:UPI00000D0F7E,UniRef:UniRef100_O53718,UniRef:UniRef50_A0QQF4,UniRef:UniRef90_O53718
contig_1	Pyrodigal	gene	462602	465148	.	-	.	ID=GCA000153685_00404_gene;locus_tag=GCA000153685_00404;gene=clpB
contig_1	Pyrodigal	CDS	462602	465148	.	-	0	ID=GCA000153685_00404;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000153685_00404;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026;gene=clpB;Parent=GCA000153685_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_003401905.1,SO:0001217,UniParc:UPI0000127B15,UniRef:UniRef100_P9WPD1,UniRef:UniRef50_P9WPD1,UniRef:UniRef90_P9WPD1
contig_1	Pyrodigal	gene	465176	466453	.	+	.	ID=GCA000153685_00405_gene;locus_tag=GCA000153685_00405
contig_1	Pyrodigal	CDS	465176	466453	.	+	0	ID=GCA000153685_00405;Name=nitric oxide dioxygenase;locus_tag=GCA000153685_00405;product=nitric oxide dioxygenase;Parent=GCA000153685_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D5DE9,UniRef:UniRef100_Q7D9X0,UniRef:UniRef50_Q7ARS9,UniRef:UniRef90_Q7ARS9
contig_1	Pyrodigal	gene	466557	469814	.	+	.	ID=GCA000153685_00406_gene;locus_tag=GCA000153685_00406;gene=luxR
contig_1	Pyrodigal	CDS	466557	469814	.	+	0	ID=GCA000153685_00406;Name=Transcriptional regulator%2C LuxR family;locus_tag=GCA000153685_00406;product=Transcriptional regulator%2C LuxR family;gene=luxR;Parent=GCA000153685_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401912.1,SO:0001217,UniParc:UPI000016521A,UniRef:UniRef100_Q7D9W9,UniRef:UniRef50_A0A653EU29,UniRef:UniRef90_Q7D9W9
contig_1	Pyrodigal	gene	469818	471149	.	-	.	ID=GCA000153685_00407_gene;locus_tag=GCA000153685_00407
contig_1	Pyrodigal	CDS	469818	471149	.	-	0	ID=GCA000153685_00407;Name=PPE family protein;locus_tag=GCA000153685_00407;product=PPE family protein;Parent=GCA000153685_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401914.1,SO:0001217,UniParc:UPI00000D2B5D,UniRef:UniRef100_A5TZB4,UniRef:UniRef50_A0A1A3BY18,UniRef:UniRef90_A0A679LB70
contig_1	Pyrodigal	gene	471483	472742	.	+	.	ID=GCA000153685_00408_gene;locus_tag=GCA000153685_00408;gene=purT
contig_1	Pyrodigal	CDS	471483	472742	.	+	0	ID=GCA000153685_00408;Name=phosphoribosylglycinamide formyltransferase 2;locus_tag=GCA000153685_00408;product=phosphoribosylglycinamide formyltransferase 2;Dbxref=GO:0000287,GO:0004644,GO:0005524,GO:0009152,GO:0016742;gene=purT;Parent=GCA000153685_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08289,RefSeq:WP_003898427.1,SO:0001217,UniParc:UPI00000D11BE,UniRef:UniRef100_P95197,UniRef:UniRef50_P95197,UniRef:UniRef90_P95197;ec_number=6.3.1.21
contig_1	Pyrodigal	gene	472781	473161	.	+	.	ID=GCA000153685_00409_gene;locus_tag=GCA000153685_00409
contig_1	Pyrodigal	CDS	472781	473161	.	+	0	ID=GCA000153685_00409;Name=Rhodanese domain-containing protein;locus_tag=GCA000153685_00409;product=Rhodanese domain-containing protein;Parent=GCA000153685_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08289,SO:0001217,UniParc:UPI00004028DE,UniRef:UniRef100_Q6ASF0,UniRef:UniRef50_Q6ASF0,UniRef:UniRef90_Q6ASF0;ec_number=6.3.1.21
contig_1	Pyrodigal	gene	473158	474378	.	+	.	ID=GCA000153685_00410_gene;locus_tag=GCA000153685_00410;gene=metZ
contig_1	Pyrodigal	CDS	473158	474378	.	+	0	ID=GCA000153685_00410;Name=O-succinylhomoserine sulfhydrylase;locus_tag=GCA000153685_00410;product=O-succinylhomoserine sulfhydrylase;Dbxref=GO:0005737,GO:0016765,GO:0016846,GO:0019346,GO:0030170,GO:0071266,GO:0071268;gene=metZ;Parent=GCA000153685_00410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10764,RefSeq:WP_003401927.1,SO:0001217,UniParc:UPI00000D11A9,UniRef:UniRef100_P9WGB5,UniRef:UniRef50_P9WGB5,UniRef:UniRef90_P9WGB5;ec_number=4.2.99.-
contig_1	Pyrodigal	gene	474375	475787	.	-	.	ID=GCA000153685_00411_gene;locus_tag=GCA000153685_00411;gene=ndhA
contig_1	Pyrodigal	CDS	474375	475787	.	-	0	ID=GCA000153685_00411;Name=Type II NADH:quinone oxidoreductase NdhA;locus_tag=GCA000153685_00411;product=Type II NADH:quinone oxidoreductase NdhA;Dbxref=GO:0003955,GO:0005829,GO:0005886,GO:0006116,GO:0016491,GO:0050136,GO:0051701;gene=ndhA;Parent=GCA000153685_00411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898428.1,SO:0001217,UniParc:UPI00000D5EE8,UniRef:UniRef100_P95200,UniRef:UniRef50_P95200,UniRef:UniRef90_P95200;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	476062	476253	.	+	.	ID=GCA000153685_00412_gene;locus_tag=GCA000153685_00412
contig_1	Pyrodigal	CDS	476062	476253	.	+	0	ID=GCA000153685_00412;Name=13E12 repeat family protein;locus_tag=GCA000153685_00412;product=13E12 repeat family protein;Parent=GCA000153685_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3C9,UniRef:UniRef100_A0A0H3LC72,UniRef:UniRef50_A0A0H3LC72,UniRef:UniRef90_A0A0H3LC72
contig_1	Pyrodigal	gene	476268	477254	.	+	.	ID=GCA000153685_00413_gene;locus_tag=GCA000153685_00413
contig_1	Pyrodigal	CDS	476268	477254	.	+	0	ID=GCA000153685_00413;Name=13E12 repeat family protein;locus_tag=GCA000153685_00413;product=13E12 repeat family protein;Parent=GCA000153685_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D28D,UniRef:UniRef100_A0A0H3L5F9,UniRef:UniRef50_A0A1X1VWK1,UniRef:UniRef90_A0A0H3L5F9
contig_1	Pyrodigal	gene	477270	477989	.	-	.	ID=GCA000153685_00414_gene;locus_tag=GCA000153685_00414
contig_1	Pyrodigal	CDS	477270	477989	.	-	0	ID=GCA000153685_00414;Name=hyaluronidase/chondrosulfatase;locus_tag=GCA000153685_00414;product=hyaluronidase/chondrosulfatase;Parent=GCA000153685_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003401942,RefSeq:WP_003401942.1,SO:0001217,UniParc:UPI00000D0F32,UniRef:UniRef100_P95202,UniRef:UniRef50_R4M3P8,UniRef:UniRef90_R4M3P8
contig_1	Pyrodigal	gene	478088	478492	.	+	.	ID=GCA000153685_00415_gene;locus_tag=GCA000153685_00415
contig_1	Pyrodigal	CDS	478088	478492	.	+	0	ID=GCA000153685_00415;Name=hypothetical protein;locus_tag=GCA000153685_00415;product=hypothetical protein;Parent=GCA000153685_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401944.1,SO:0001217,UniParc:UPI0000164F69,UniRef:UniRef100_A0A679LAW0,UniRef:UniRef50_P95203,UniRef:UniRef90_P95203
contig_1	Pyrodigal	gene	478474	478890	.	+	.	ID=GCA000153685_00416_gene;locus_tag=GCA000153685_00416
contig_1	Pyrodigal	CDS	478474	478890	.	+	0	ID=GCA000153685_00416;Name=Phospholipase D-like domain-containing protein;locus_tag=GCA000153685_00416;product=Phospholipase D-like domain-containing protein;Parent=GCA000153685_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBF3,UniRef:UniRef100_A0A0H3L5Y8,UniRef:UniRef50_P95204,UniRef:UniRef90_P95204
contig_1	Pyrodigal	gene	478964	479332	.	+	.	ID=GCA000153685_00417_gene;locus_tag=GCA000153685_00417
contig_1	Pyrodigal	CDS	478964	479332	.	+	0	ID=GCA000153685_00417;Name=Conserved 13E12 repeat family protein;locus_tag=GCA000153685_00417;product=Conserved 13E12 repeat family protein;Parent=GCA000153685_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401960.1,SO:0001217,UniParc:UPI00000C14B9,UniRef:UniRef100_P95205,UniRef:UniRef50_A0A1X1UR85,UniRef:UniRef90_P95205
contig_1	Pyrodigal	gene	479827	480468	.	-	.	ID=GCA000153685_00418_gene;locus_tag=GCA000153685_00418
contig_1	Pyrodigal	CDS	479827	480468	.	-	0	ID=GCA000153685_00418;Name=putative secreted protein;locus_tag=GCA000153685_00418;product=putative secreted protein;Parent=GCA000153685_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401963.1,SO:0001217,UniParc:UPI00000D10C6,UniRef:UniRef100_P95206,UniRef:UniRef50_A0A0I9UNU9,UniRef:UniRef90_P95206
contig_1	Pyrodigal	gene	480475	481704	.	-	.	ID=GCA000153685_00419_gene;locus_tag=GCA000153685_00419;gene=lpqK
contig_1	Pyrodigal	CDS	480475	481704	.	-	0	ID=GCA000153685_00419;Name=putative conserved lipoprotein LpqK;locus_tag=GCA000153685_00419;product=putative conserved lipoprotein LpqK;gene=lpqK;Parent=GCA000153685_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898432.1,SO:0001217,UniParc:UPI00000D5EEC,UniRef:UniRef100_P95207,UniRef:UniRef50_U5E3U1,UniRef:UniRef90_P95207
contig_1	Pyrodigal	gene	481714	482901	.	-	.	ID=GCA000153685_00420_gene;locus_tag=GCA000153685_00420
contig_1	Pyrodigal	CDS	481714	482901	.	-	0	ID=GCA000153685_00420;Name=Glutaryl-CoA dehydrogenase;locus_tag=GCA000153685_00420;product=Glutaryl-CoA dehydrogenase;Parent=GCA000153685_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00252,RefSeq:WP_003401972.1,SO:0001217,UniParc:UPI000016521C,UniRef:UniRef100_P95208,UniRef:UniRef50_A0A918X6E2,UniRef:UniRef90_A0A655A210;ec_number=1.3.8.6
contig_1	Pyrodigal	gene	482937	483308	.	+	.	ID=GCA000153685_00421_gene;locus_tag=GCA000153685_00421
contig_1	Pyrodigal	CDS	482937	483308	.	+	0	ID=GCA000153685_00421;Name=Transmembrane protein;locus_tag=GCA000153685_00421;product=Transmembrane protein;Parent=GCA000153685_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003401978.1,SO:0001217,UniParc:UPI00000D0FCE,UniRef:UniRef100_A5TZC7,UniRef:UniRef50_I4BCK0,UniRef:UniRef90_R4LRY2
contig_1	Pyrodigal	gene	483503	486379	.	-	.	ID=GCA000153685_00422_gene;locus_tag=GCA000153685_00422;gene=mmpL1
contig_1	Pyrodigal	CDS	483503	486379	.	-	0	ID=GCA000153685_00422;Name=RND transporter MmpL1;locus_tag=GCA000153685_00422;product=RND transporter MmpL1;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=mmpL1;Parent=GCA000153685_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898435,RefSeq:WP_003898435.1,SO:0001217,UniParc:UPI000012F26E,UniRef:UniRef100_P9WJV9,UniRef:UniRef50_P9WJV1,UniRef:UniRef90_P9WJV9
contig_1	Pyrodigal	gene	486489	487373	.	-	.	ID=GCA000153685_00423_gene;locus_tag=GCA000153685_00423;gene=tnp
contig_1	Pyrodigal	CDS	486489	487373	.	-	0	ID=GCA000153685_00423;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_00423;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	487424	487750	.	-	.	ID=GCA000153685_00424_gene;locus_tag=GCA000153685_00424;gene=tnp
contig_1	Pyrodigal	CDS	487424	487750	.	-	0	ID=GCA000153685_00424;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_00424;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	487707	488162	.	-	.	ID=GCA000153685_00425_gene;locus_tag=GCA000153685_00425;gene=mmpS1
contig_1	Pyrodigal	CDS	487707	488162	.	-	0	ID=GCA000153685_00425;Name=putative transport accessory protein MmpS1;locus_tag=GCA000153685_00425;product=putative transport accessory protein MmpS1;Dbxref=GO:0005886;gene=mmpS1;Parent=GCA000153685_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900138.1,SO:0001217,UniParc:UPI0000164F6C,UniRef:UniRef100_P9WJT4,UniRef:UniRef50_P9WJT5,UniRef:UniRef90_P9WJT4
contig_1	Pyrodigal	gene	489035	490240	.	+	.	ID=GCA000153685_00426_gene;locus_tag=GCA000153685_00426;gene=fadD30
contig_1	Pyrodigal	CDS	489035	490240	.	+	0	ID=GCA000153685_00426;Name=putative long-chain-fatty-acid--AMP ligase FadD30;locus_tag=GCA000153685_00426;product=putative long-chain-fatty-acid--AMP ligase FadD30;Dbxref=GO:0005524,GO:0006633,GO:0008610,GO:0016874,GO:0052167,GO:0070566,GO:0071766;gene=fadD30;Parent=GCA000153685_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045A08D8,UniRef:UniRef100_Q7U226,UniRef:UniRef50_P9WQ57,UniRef:UniRef90_P9WQ57;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	490237	494445	.	+	.	ID=GCA000153685_00427_gene;locus_tag=GCA000153685_00427
contig_1	Pyrodigal	CDS	490237	494445	.	+	0	ID=GCA000153685_00427;Name=Polyketide synthase;locus_tag=GCA000153685_00427;product=Polyketide synthase;Parent=GCA000153685_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900140.1,SO:0001217,UniParc:UPI0001277FD6,UniRef:UniRef100_A0A0H3LC87,UniRef:UniRef50_A0A655IB62,UniRef:UniRef90_Q7D9V6
contig_1	Pyrodigal	gene	494393	495211	.	-	.	ID=GCA000153685_00428_gene;locus_tag=GCA000153685_00428
contig_1	Pyrodigal	CDS	494393	495211	.	-	0	ID=GCA000153685_00428;Name=Beta lactamase like protein;locus_tag=GCA000153685_00428;product=Beta lactamase like protein;Parent=GCA000153685_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898437.1,SO:0001217,UniParc:UPI00000D4FFA,UniRef:UniRef100_O86336,UniRef:UniRef50_O86336,UniRef:UniRef90_O86336
contig_1	Pyrodigal	gene	495289	496299	.	+	.	ID=GCA000153685_00429_gene;locus_tag=GCA000153685_00429;gene=fgd
contig_1	Pyrodigal	CDS	495289	496299	.	+	0	ID=GCA000153685_00429;Name=glucose-6-phosphate dehydrogenase (coenzyme-F420);locus_tag=GCA000153685_00429;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);Dbxref=GO:0005829,GO:0005886,GO:0005975,GO:0006007,GO:0009274,GO:0016614,GO:0016705,GO:0045454,GO:0052749,GO:0070967;gene=fgd;Parent=GCA000153685_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900141.1,SO:0001217,UniParc:UPI0001277FF4,UniRef:UniRef100_A0A0H3L5H2,UniRef:UniRef50_P9WNE1,UniRef:UniRef90_P9WNE1;ec_number=1.1.98.2
contig_1	Pyrodigal	gene	496292	498364	.	+	.	ID=GCA000153685_00430_gene;locus_tag=GCA000153685_00430;gene=pta
contig_1	Pyrodigal	CDS	496292	498364	.	+	0	ID=GCA000153685_00430;Name=phosphate acetyltransferase;locus_tag=GCA000153685_00430;product=phosphate acetyltransferase;Dbxref=GO:0005576,GO:0005737,GO:0006085,GO:0008959,GO:0016407;gene=pta;Parent=GCA000153685_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13788,RefSeq:WP_003898439.1,SO:0001217,UniParc:UPI00001328A2,UniRef:UniRef100_P9WHP1,UniRef:UniRef50_P9WHP1,UniRef:UniRef90_P9WHP1;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	498357	499514	.	+	.	ID=GCA000153685_00431_gene;locus_tag=GCA000153685_00431;gene=ackA
contig_1	Pyrodigal	CDS	498357	499514	.	+	0	ID=GCA000153685_00431;Name=Acetate kinase;locus_tag=GCA000153685_00431;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA000153685_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402097.1,SO:0001217,UniParc:UPI0000125297,UniRef:UniRef100_P9WQH1,UniRef:UniRef50_P77845,UniRef:UniRef90_P9WQH1;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	499568	501820	.	-	.	ID=GCA000153685_00432_gene;locus_tag=GCA000153685_00432;gene=pknG
contig_1	Pyrodigal	CDS	499568	501820	.	-	0	ID=GCA000153685_00432;Name=serine/threonine protein kinase PknG;locus_tag=GCA000153685_00432;product=serine/threonine protein kinase PknG;Dbxref=GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005737,GO:0005886,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0046677,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknG;Parent=GCA000153685_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402100,RefSeq:WP_003402100.1,SO:0001217,UniParc:UPI0000131B7D,UniRef:UniRef100_P9WI73,UniRef:UniRef50_P9WI73,UniRef:UniRef90_P9WI73;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	501820	502806	.	-	.	ID=GCA000153685_00433_gene;locus_tag=GCA000153685_00433
contig_1	Pyrodigal	CDS	501820	502806	.	-	0	ID=GCA000153685_00433;Name=Glutamine-binding lipoprotein;locus_tag=GCA000153685_00433;product=Glutamine-binding lipoprotein;Parent=GCA000153685_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900142.1,SO:0001217,UniParc:UPI00000D6057,UniRef:UniRef100_A0A0H3LCA5,UniRef:UniRef50_J2JCE6,UniRef:UniRef90_A0A0H3LCA5
contig_1	Pyrodigal	gene	502806	504125	.	-	.	ID=GCA000153685_00434_gene;locus_tag=GCA000153685_00434;gene=glnX
contig_1	Pyrodigal	CDS	502806	504125	.	-	0	ID=GCA000153685_00434;Name=protein kinase G-activating protein GlnX;locus_tag=GCA000153685_00434;product=protein kinase G-activating protein GlnX;gene=glnX;Parent=GCA000153685_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911172,RefSeq:WP_003402108.1,SO:0001217,UniParc:UPI0000164F70,UniRef:UniRef100_A0A679LAX7,UniRef:UniRef50_G7CHT2,UniRef:UniRef90_A0A1A3UF36
contig_1	Pyrodigal	gene	504279	504872	.	+	.	ID=GCA000153685_00435_gene;locus_tag=GCA000153685_00435;gene=mutT3
contig_1	Pyrodigal	CDS	504279	504872	.	+	0	ID=GCA000153685_00435;Name=Putative 8-oxo-dGTP diphosphatase 3;locus_tag=GCA000153685_00435;product=Putative 8-oxo-dGTP diphosphatase 3;Dbxref=GO:0006260,GO:0006281,GO:0035539,GO:0046872;gene=mutT3;Parent=GCA000153685_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002F42B5D,UniRef:UniRef100_A0A0E7XJ10,UniRef:UniRef50_P9WIX9,UniRef:UniRef90_P9WIX9;ec_number=3.6.1.55
contig_1	Pyrodigal	gene	504856	505524	.	-	.	ID=GCA000153685_00436_gene;locus_tag=GCA000153685_00436;gene=thiE
contig_1	Pyrodigal	CDS	504856	505524	.	-	0	ID=GCA000153685_00436;Name=Thiamine-phosphate synthase;locus_tag=GCA000153685_00436;product=Thiamine-phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000153685_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402115.1,SO:0001217,UniParc:UPI0000136DD9,UniRef:UniRef100_P9WG75,UniRef:UniRef50_P9WG75,UniRef:UniRef90_P9WG75;ec_number=2.5.1.3
contig_1	Infernal	regulatory_region	505553	505663	6.8e-09	+	.	ID=FNJOPAJJMO_83;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	505654	506676	.	+	.	ID=GCA000153685_00437_gene;locus_tag=GCA000153685_00437;gene=thiO
contig_1	Pyrodigal	CDS	505654	506676	.	+	0	ID=GCA000153685_00437;Name=glycine oxidase ThiO;locus_tag=GCA000153685_00437;product=glycine oxidase ThiO;Dbxref=GO:0016647,GO:0050660;gene=thiO;Parent=GCA000153685_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402118.1,SO:0001217,UniParc:UPI00000D5E4C,UniRef:UniRef100_P96261,UniRef:UniRef50_Q73T22,UniRef:UniRef90_A0A655IGF7;ec_number=1.4.3.19
contig_1	Pyrodigal	gene	506673	506879	.	+	.	ID=GCA000153685_00438_gene;locus_tag=GCA000153685_00438;gene=thiS
contig_1	Pyrodigal	CDS	506673	506879	.	+	0	ID=GCA000153685_00438;Name=sulfur carrier protein ThiS;locus_tag=GCA000153685_00438;product=sulfur carrier protein ThiS;Dbxref=GO:0003824,GO:0009228;gene=thiS;Parent=GCA000153685_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402121.1,SO:0001217,UniParc:UPI00000D0F4E,UniRef:UniRef100_P96262,UniRef:UniRef50_Q7AQK0,UniRef:UniRef90_P96262
contig_1	Pyrodigal	gene	506872	507630	.	+	.	ID=GCA000153685_00439_gene;locus_tag=GCA000153685_00439;gene=thiG
contig_1	Pyrodigal	CDS	506872	507630	.	+	0	ID=GCA000153685_00439;Name=thiazole synthase;locus_tag=GCA000153685_00439;product=thiazole synthase;Dbxref=GO:0005737,GO:0009229,GO:1990107;gene=thiG;Parent=GCA000153685_00439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000931993,BlastRules:WP_003916659,BlastRules:WP_010886483,COG:COG2022,COG:H,KEGG:K03149,RefSeq:WP_003402126.1,SO:0001217,UniParc:UPI0000164F71,UniRef:UniRef100_P59948,UniRef:UniRef50_Q82AG5,UniRef:UniRef90_P9WG73;ec_number=2.8.1.10
contig_1	Pyrodigal	gene	508002	509504	.	+	.	ID=GCA000153685_00440_gene;locus_tag=GCA000153685_00440;gene=lpqL
contig_1	Pyrodigal	CDS	508002	509504	.	+	0	ID=GCA000153685_00440;Name=putative lipoprotein aminopeptidase LpqL;locus_tag=GCA000153685_00440;product=putative lipoprotein aminopeptidase LpqL;Dbxref=GO:0004177,GO:0005576,GO:0005886,GO:0006508,GO:0008235,GO:0046872;gene=lpqL;Parent=GCA000153685_00440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402133.1,SO:0001217,UniParc:UPI0000031879,UniRef:UniRef100_P96264,UniRef:UniRef50_P96264,UniRef:UniRef90_P96264;ec_number=3.4.11.1
contig_1	Pyrodigal	gene	509592	511088	.	+	.	ID=GCA000153685_00441_gene;locus_tag=GCA000153685_00441;gene=lpqM
contig_1	Pyrodigal	CDS	509592	511088	.	+	0	ID=GCA000153685_00441;Name=putative lipoprotein peptidase lpqM;locus_tag=GCA000153685_00441;product=putative lipoprotein peptidase lpqM;gene=lpqM;Parent=GCA000153685_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898442.1,SO:0001217,UniParc:UPI00000D110B,UniRef:UniRef100_P96265,UniRef:UniRef50_A0A498PSS1,UniRef:UniRef90_A0A0H3M1I0
contig_1	Pyrodigal	gene	511067	511408	.	-	.	ID=GCA000153685_00442_gene;locus_tag=GCA000153685_00442
contig_1	Pyrodigal	CDS	511067	511408	.	-	0	ID=GCA000153685_00442;Name=putative transmembrane protein;locus_tag=GCA000153685_00442;product=putative transmembrane protein;Parent=GCA000153685_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911201.1,SO:0001217,UniParc:UPI0001E61DBC,UniRef:UniRef100_A0A0E7XNW1,UniRef:UniRef50_A0A975PZ47,UniRef:UniRef90_P96266
contig_1	Pyrodigal	gene	511638	512267	.	-	.	ID=GCA000153685_00443_gene;locus_tag=GCA000153685_00443
contig_1	Pyrodigal	CDS	511638	512267	.	-	0	ID=GCA000153685_00443;Name=KANL3/Tex30 alpha/beta hydrolase-like domain-containing protein;locus_tag=GCA000153685_00443;product=KANL3/Tex30 alpha/beta hydrolase-like domain-containing protein;Parent=GCA000153685_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402145.1,SO:0001217,UniParc:UPI00000D11DE,UniRef:UniRef100_P96267,UniRef:UniRef50_P96267,UniRef:UniRef90_P96267
contig_1	Pyrodigal	gene	512264	513091	.	-	.	ID=GCA000153685_00444_gene;locus_tag=GCA000153685_00444;gene=thiD
contig_1	Pyrodigal	CDS	512264	513091	.	-	0	ID=GCA000153685_00444;Name=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;locus_tag=GCA000153685_00444;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229;gene=thiD;Parent=GCA000153685_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898443.1,SO:0001217,UniParc:UPI00005EE3D2,UniRef:UniRef100_P9WG77,UniRef:UniRef50_P9WG77,UniRef:UniRef90_P9WG77;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	513088	514731	.	-	.	ID=GCA000153685_00445_gene;locus_tag=GCA000153685_00445;gene=thiC
contig_1	Pyrodigal	CDS	513088	514731	.	-	0	ID=GCA000153685_00445;Name=phosphomethylpyrimidine synthase ThiC;locus_tag=GCA000153685_00445;product=phosphomethylpyrimidine synthase ThiC;Dbxref=GO:0005829,GO:0005886,GO:0008270,GO:0009228,GO:0009229,GO:0016830,GO:0051536,GO:0051539;gene=thiC;Parent=GCA000153685_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03147,RefSeq:WP_003900143.1,SO:0001217,UniParc:UPI0000136DA5,UniRef:UniRef100_P9WG79,UniRef:UniRef50_P45740,UniRef:UniRef90_P9WG79;ec_number=4.1.99.17
contig_1	Infernal	regulatory_region	514722	514832	7.1e-10	-	.	ID=FNJOPAJJMO_81;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	514883	515158	.	-	.	ID=GCA000153685_00446_gene;locus_tag=GCA000153685_00446
contig_1	Pyrodigal	CDS	514883	515158	.	-	0	ID=GCA000153685_00446;Name=DUF4342 domain-containing protein;locus_tag=GCA000153685_00446;product=DUF4342 domain-containing protein;Parent=GCA000153685_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402157.1,SO:0001217,UniParc:UPI00000C14BD,UniRef:UniRef100_P96270,UniRef:UniRef50_A0A1S1LE23,UniRef:UniRef90_P96270
contig_1	Pyrodigal	gene	515208	519827	.	-	.	ID=GCA000153685_00447_gene;locus_tag=GCA000153685_00447
contig_1	Pyrodigal	CDS	515208	519827	.	-	0	ID=GCA000153685_00447;Name=Metal cation transporter P-type ATPase;locus_tag=GCA000153685_00447;product=Metal cation transporter P-type ATPase;Parent=GCA000153685_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12955,RefSeq:WP_003898445.1,SO:0001217,UniParc:UPI0000164F74,UniRef:UniRef100_A0A0H3LCB4,UniRef:UniRef50_A0A0H3LCB4,UniRef:UniRef90_A0A0H3LCB4;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	519879	520322	.	-	.	ID=GCA000153685_00448_gene;locus_tag=GCA000153685_00448
contig_1	Pyrodigal	CDS	519879	520322	.	-	0	ID=GCA000153685_00448;Name=Transmembrane protein;locus_tag=GCA000153685_00448;product=Transmembrane protein;Parent=GCA000153685_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402171.1,SO:0001217,UniParc:UPI00000C14BE,UniRef:UniRef100_P96272,UniRef:UniRef50_A0A1A3C526,UniRef:UniRef90_A0A0H3L5J2
contig_1	Pyrodigal	gene	520523	521398	.	-	.	ID=GCA000153685_00449_gene;locus_tag=GCA000153685_00449
contig_1	Pyrodigal	CDS	520523	521398	.	-	0	ID=GCA000153685_00449;Name=exodeoxyribonuclease III;locus_tag=GCA000153685_00449;product=exodeoxyribonuclease III;Dbxref=GO:0004518,GO:0006281;Parent=GCA000153685_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01142,RefSeq:WP_003402176.1,SO:0001217,UniParc:UPI00000D5F1F,UniRef:UniRef100_A5TZF3,UniRef:UniRef50_A0A0U5BRM8,UniRef:UniRef90_A0A655EXI5;ec_number=3.1.11.2
contig_1	Pyrodigal	gene	521401	522309	.	-	.	ID=GCA000153685_00450_gene;locus_tag=GCA000153685_00450
contig_1	Pyrodigal	CDS	521401	522309	.	-	0	ID=GCA000153685_00450;Name=putative histone acetyltransferase Rv0428c;locus_tag=GCA000153685_00450;product=putative histone acetyltransferase Rv0428c;Dbxref=GO:0016746;Parent=GCA000153685_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22476,RefSeq:WP_003900144.1,SO:0001217,UniParc:UPI000016521D,UniRef:UniRef100_P96274,UniRef:UniRef50_P96274,UniRef:UniRef90_P96274;ec_number=2.3.1.48
contig_1	Pyrodigal	gene	522309	522902	.	-	.	ID=GCA000153685_00451_gene;locus_tag=GCA000153685_00451;gene=def
contig_1	Pyrodigal	CDS	522309	522902	.	-	0	ID=GCA000153685_00451;Name=peptide deformylase;locus_tag=GCA000153685_00451;product=peptide deformylase;Dbxref=GO:0006412,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000153685_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01462,RefSeq:WP_003402185.1,SO:0001217,UniParc:UPI0000129159,UniRef:UniRef100_P9WIJ3,UniRef:UniRef50_P9WIJ3,UniRef:UniRef90_P9WIJ3;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	523239	523547	.	+	.	ID=GCA000153685_00452_gene;locus_tag=GCA000153685_00452
contig_1	Pyrodigal	CDS	523239	523547	.	+	0	ID=GCA000153685_00452;Name=DUF3263 domain-containing protein;locus_tag=GCA000153685_00452;product=DUF3263 domain-containing protein;Parent=GCA000153685_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402188.1,SO:0001217,UniParc:UPI000016521E,UniRef:UniRef100_P96276,UniRef:UniRef50_A0A7I9XTX2,UniRef:UniRef90_P96276
contig_1	Pyrodigal	gene	523600	524073	.	+	.	ID=GCA000153685_00453_gene;locus_tag=GCA000153685_00453
contig_1	Pyrodigal	CDS	523600	524073	.	+	0	ID=GCA000153685_00453;Name=Tuberculin related peptide;locus_tag=GCA000153685_00453;product=Tuberculin related peptide;Parent=GCA000153685_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938812.1,SO:0001217,UniParc:UPI0001901CA0,UniRef:UniRef100_P96277,UniRef:UniRef50_P96277,UniRef:UniRef90_P96277
contig_1	Pyrodigal	gene	524106	524828	.	+	.	ID=GCA000153685_00454_gene;locus_tag=GCA000153685_00454;gene=sodC
contig_1	Pyrodigal	CDS	524106	524828	.	+	0	ID=GCA000153685_00454;Name=superoxide dismutase;locus_tag=GCA000153685_00454;product=superoxide dismutase;Dbxref=GO:0004784,GO:0005507,GO:0005576,GO:0005886,GO:0006979,GO:0009274,GO:0019430,GO:0033194,GO:0045454,GO:0075136,GO:0141082;gene=sodC;Parent=GCA000153685_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402198.1,SO:0001217,UniParc:UPI0000135BB1,UniRef:UniRef100_P9WGE9,UniRef:UniRef50_P9WGE9,UniRef:UniRef90_P9WGE9,VFDB:VFC0282,VFDB:VFG001380;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	524809	525960	.	+	.	ID=GCA000153685_00455_gene;locus_tag=GCA000153685_00455
contig_1	Pyrodigal	CDS	524809	525960	.	+	0	ID=GCA000153685_00455;Name=glutamate--cysteine ligase;locus_tag=GCA000153685_00455;product=glutamate--cysteine ligase;Dbxref=GO:0004357,GO:0042398;Parent=GCA000153685_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06048,SO:0001217,UniParc:UPI0000164F75,UniRef:UniRef100_A0A0H3L9I1,UniRef:UniRef50_Q73T00,UniRef:UniRef90_A0A0H3L9I1;ec_number=6.3.2.2
contig_1	Pyrodigal	gene	526020	526673	.	+	.	ID=GCA000153685_00456_gene;locus_tag=GCA000153685_00456
contig_1	Pyrodigal	CDS	526020	526673	.	+	0	ID=GCA000153685_00456;Name=Lon N-terminal domain-containing protein;locus_tag=GCA000153685_00456;product=Lon N-terminal domain-containing protein;Parent=GCA000153685_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07157,RefSeq:WP_003900146.1,SO:0001217,UniParc:UPI000016521F,UniRef:UniRef100_P96280,UniRef:UniRef50_A0A0J6W530,UniRef:UniRef90_P96280
contig_1	Pyrodigal	gene	526853	529039	.	-	.	ID=GCA000153685_00457_gene;locus_tag=GCA000153685_00457
contig_1	Pyrodigal	CDS	526853	529039	.	-	0	ID=GCA000153685_00457;Name=ATPase;locus_tag=GCA000153685_00457;product=ATPase;Parent=GCA000153685_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402206.1,SO:0001217,UniParc:UPI00000D5FAD,UniRef:UniRef100_P96281,UniRef:UniRef50_A0A143QG11,UniRef:UniRef90_A0A654ZVP8
contig_1	Pyrodigal	gene	529036	529896	.	-	.	ID=GCA000153685_00458_gene;locus_tag=GCA000153685_00458;gene=pssA
contig_1	Pyrodigal	CDS	529036	529896	.	-	0	ID=GCA000153685_00458;Name=CDP-diacylglycerol--serine O-phosphatidyltransferase;locus_tag=GCA000153685_00458;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;Dbxref=GO:0003882,GO:0005576,GO:0005886,GO:0008654;gene=pssA;Parent=GCA000153685_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1183,COG:I,KEGG:K17103,RefSeq:WP_003402213.1,SO:0001217,UniParc:UPI00001A8EDF,UniRef:UniRef100_P59949,UniRef:UniRef50_P9WPG1,UniRef:UniRef90_P9WPG1;ec_number=2.7.8.8
contig_1	Pyrodigal	gene	529893	530588	.	-	.	ID=GCA000153685_00459_gene;locus_tag=GCA000153685_00459
contig_1	Pyrodigal	CDS	529893	530588	.	-	0	ID=GCA000153685_00459;Name=phosphatidylserine decarboxylase;locus_tag=GCA000153685_00459;product=phosphatidylserine decarboxylase;Dbxref=GO:0004609,GO:0008654;Parent=GCA000153685_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01613,RefSeq:WP_003900148.1,SO:0001217,UniParc:UPI000127800A,UniRef:UniRef100_A0A0H3L5L2,UniRef:UniRef50_Q9CCW9,UniRef:UniRef90_A0A0H3L5L2;ec_number=4.1.1.65
contig_1	Pyrodigal	gene	530649	531827	.	-	.	ID=GCA000153685_00460_gene;locus_tag=GCA000153685_00460;gene=glp
contig_1	Pyrodigal	CDS	530649	531827	.	-	0	ID=GCA000153685_00460;Name=gephyrin-like molybdotransferase Glp;locus_tag=GCA000153685_00460;product=gephyrin-like molybdotransferase Glp;Dbxref=GO:0005737,GO:0005829,GO:0006777,GO:0046872,GO:0061599,GO:1990586;gene=glp;Parent=GCA000153685_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3D9,UniRef:UniRef100_P9WJQ5,UniRef:UniRef50_P9WJQ5,UniRef:UniRef90_P9WJQ5;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	531885	532820	.	-	.	ID=GCA000153685_00461_gene;locus_tag=GCA000153685_00461
contig_1	Pyrodigal	CDS	531885	532820	.	-	0	ID=GCA000153685_00461;Name=Short chain dehydrogenase;locus_tag=GCA000153685_00461;product=Short chain dehydrogenase;Parent=GCA000153685_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402219.1,SO:0001217,UniParc:UPI0000165220,UniRef:UniRef100_Q7D9T6,UniRef:UniRef50_G8RW98,UniRef:UniRef90_R4LS28
contig_1	Pyrodigal	gene	533114	534736	.	+	.	ID=GCA000153685_00462_gene;locus_tag=GCA000153685_00462;gene=groL
contig_1	Pyrodigal	CDS	533114	534736	.	+	0	ID=GCA000153685_00462;Name=chaperonin GroEL;locus_tag=GCA000153685_00462;product=chaperonin GroEL;Dbxref=GO:0001666,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0009274,GO:0009408,GO:0009986,GO:0016853,GO:0033650,GO:0042026,GO:0042603,GO:0044406,GO:0051082,GO:0051085,GO:0061077,GO:0140662,GO:1990220;gene=groL;Parent=GCA000153685_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_003402236.1,SO:0001217,UniParc:UPI000002C36C,UniRef:UniRef100_P9WPE7,UniRef:UniRef50_P9WPE7,UniRef:UniRef90_P9WPE7;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	534802	535230	.	-	.	ID=GCA000153685_00463_gene;locus_tag=GCA000153685_00463
contig_1	Pyrodigal	CDS	534802	535230	.	-	0	ID=GCA000153685_00463;Name=putative protein Rv0441c;locus_tag=GCA000153685_00463;product=putative protein Rv0441c;Parent=GCA000153685_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402238.1,SO:0001217,UniParc:UPI00001397F5,UniRef:UniRef100_P9WKW3,UniRef:UniRef50_P9WKW3,UniRef:UniRef90_P9WKW3
contig_1	Pyrodigal	gene	535257	536669	.	-	.	ID=GCA000153685_00464_gene;locus_tag=GCA000153685_00464;gene=pPE10
contig_1	Pyrodigal	CDS	535257	536669	.	-	0	ID=GCA000153685_00464;Name=PPE family protein PPE10;locus_tag=GCA000153685_00464;product=PPE family protein PPE10;Dbxref=GO:0005576,GO:0042783,GO:0052572;gene=pPE10;Parent=GCA000153685_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900929.1,SO:0001217,UniParc:UPI00005EE3DB,UniRef:UniRef100_P9WI41,UniRef:UniRef50_B2HQQ1,UniRef:UniRef90_P9WI41
contig_1	Pyrodigal	gene	536860	537417	.	+	.	ID=GCA000153685_00465_gene;locus_tag=GCA000153685_00465
contig_1	Pyrodigal	CDS	536860	537417	.	+	0	ID=GCA000153685_00465;Name=mycothiol transferase;locus_tag=GCA000153685_00465;product=mycothiol transferase;Dbxref=GO:0010127,GO:0016740;Parent=GCA000153685_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402240,SO:0001217,UniParc:UPI00000CCB8D,UniRef:UniRef100_O53728,UniRef:UniRef50_B2HQQ3,UniRef:UniRef90_O53728;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	537597	538295	.	-	.	ID=GCA000153685_00466_gene;locus_tag=GCA000153685_00466;gene=rskA
contig_1	Pyrodigal	CDS	537597	538295	.	-	0	ID=GCA000153685_00466;Name=anti-sigma-K factor RskA;locus_tag=GCA000153685_00466;product=anti-sigma-K factor RskA;Dbxref=GO:0005886,GO:0006417,GO:0009274,GO:0016989;gene=rskA;Parent=GCA000153685_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898455,RefSeq:WP_003898455.1,SO:0001217,UniParc:UPI00000D109E,UniRef:UniRef100_P9WGX5,UniRef:UniRef50_P9WGX5,UniRef:UniRef90_P9WGX5
contig_1	Pyrodigal	gene	538339	538902	.	-	.	ID=GCA000153685_00467_gene;locus_tag=GCA000153685_00467;gene=sigK
contig_1	Pyrodigal	CDS	538339	538902	.	-	0	ID=GCA000153685_00467;Name=sigma-70 family RNA polymerase sigma factor SigK;locus_tag=GCA000153685_00467;product=sigma-70 family RNA polymerase sigma factor SigK;Dbxref=GO:0003677,GO:0006352,GO:0016987;gene=sigK;Parent=GCA000153685_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402246,RefSeq:WP_003402246.1,SO:0001217,UniParc:UPI00000D0F7B,UniRef:UniRef100_P9WGH7,UniRef:UniRef50_P9WGH7,UniRef:UniRef90_P9WGH7
contig_1	Pyrodigal	gene	538951	539733	.	-	.	ID=GCA000153685_00468_gene;locus_tag=GCA000153685_00468
contig_1	Pyrodigal	CDS	538951	539733	.	-	0	ID=GCA000153685_00468;Name=putative conserved transmembrane protein;locus_tag=GCA000153685_00468;product=putative conserved transmembrane protein;Parent=GCA000153685_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F610A,UniRef:UniRef100_A0A0H3L646,UniRef:UniRef50_H6MSA2,UniRef:UniRef90_O53731
contig_1	Pyrodigal	gene	539730	541013	.	-	.	ID=GCA000153685_00469_gene;locus_tag=GCA000153685_00469;gene=ufaA1
contig_1	Pyrodigal	CDS	539730	541013	.	-	0	ID=GCA000153685_00469;Name=Tuberculostearic acid methyltransferase UfaA1;locus_tag=GCA000153685_00469;product=Tuberculostearic acid methyltransferase UfaA1;Dbxref=GO:0006633,GO:0008168,GO:0032259,GO:0071555;gene=ufaA1;Parent=GCA000153685_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00574,RefSeq:WP_003402250.1,SO:0001217,UniParc:UPI0000165224,UniRef:UniRef100_O53732,UniRef:UniRef50_O53732,UniRef:UniRef90_O53732;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	541010	541741	.	-	.	ID=GCA000153685_00470_gene;locus_tag=GCA000153685_00470
contig_1	Pyrodigal	CDS	541010	541741	.	-	0	ID=GCA000153685_00470;Name=DUF1365 domain-containing protein;locus_tag=GCA000153685_00470;product=DUF1365 domain-containing protein;Parent=GCA000153685_00470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09701,RefSeq:WP_003900930.1,SO:0001217,UniParc:UPI00000CCB8F,UniRef:UniRef100_A0A0H3L5K9,UniRef:UniRef50_O53733,UniRef:UniRef90_A0A0H3L5K9
contig_1	Pyrodigal	gene	541735	543030	.	-	.	ID=GCA000153685_00471_gene;locus_tag=GCA000153685_00471
contig_1	Pyrodigal	CDS	541735	543030	.	-	0	ID=GCA000153685_00471;Name=Amine oxidase domain-containing protein;locus_tag=GCA000153685_00471;product=Amine oxidase domain-containing protein;Parent=GCA000153685_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06954,SO:0001217,UniParc:UPI00005EE3DE,UniRef:UniRef100_A0A0H3L5M2,UniRef:UniRef50_A0A498PQI8,UniRef:UniRef90_O53734
contig_1	Pyrodigal	gene	543094	545997	.	-	.	ID=GCA000153685_00472_gene;locus_tag=GCA000153685_00472;gene=mmpL4
contig_1	Pyrodigal	CDS	543094	545997	.	-	0	ID=GCA000153685_00472;Name=siderophore RND transporter MmpL4;locus_tag=GCA000153685_00472;product=siderophore RND transporter MmpL4;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0051701;gene=mmpL4;Parent=GCA000153685_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898458,RefSeq:WP_003898458.1,SO:0001217,UniParc:UPI0000036B96,UniRef:UniRef100_P9WJV3,UniRef:UniRef50_P9WJV3,UniRef:UniRef90_P9WJV3
contig_1	Pyrodigal	gene	545994	546410	.	-	.	ID=GCA000153685_00473_gene;locus_tag=GCA000153685_00473;gene=mmpS4
contig_1	Pyrodigal	CDS	545994	546410	.	-	0	ID=GCA000153685_00473;Name=Siderophore export accessory protein MmpS4;locus_tag=GCA000153685_00473;product=Siderophore export accessory protein MmpS4;Dbxref=GO:0005886;gene=mmpS4;Parent=GCA000153685_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3DF,UniRef:UniRef100_P9WJS9,UniRef:UniRef50_P9WJS9,UniRef:UniRef90_P9WJS9
contig_1	Pyrodigal	gene	546597	547358	.	+	.	ID=GCA000153685_00474_gene;locus_tag=GCA000153685_00474
contig_1	Pyrodigal	CDS	546597	547358	.	+	0	ID=GCA000153685_00474;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_00474;product=HTH tetR-type domain-containing protein;Parent=GCA000153685_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FC1,UniRef:UniRef100_Q7D9S8,UniRef:UniRef50_Q73SX8,UniRef:UniRef90_Q7D9S8
contig_1	Pyrodigal	gene	547680	549236	.	+	.	ID=GCA000153685_00475_gene;locus_tag=GCA000153685_00475;gene=pPE11
contig_1	Pyrodigal	CDS	547680	549236	.	+	0	ID=GCA000153685_00475;Name=PPE family protein PPE11;locus_tag=GCA000153685_00475;product=PPE family protein PPE11;Dbxref=GO:0005576,GO:0005829,GO:0052572;gene=pPE11;Parent=GCA000153685_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898460.1,SO:0001217,UniParc:UPI0000164F78,UniRef:UniRef100_P9WI38,UniRef:UniRef50_P9WI39,UniRef:UniRef90_P9WI39
contig_1	Pyrodigal	gene	549242	549565	.	-	.	ID=GCA000153685_00476_gene;locus_tag=GCA000153685_00476
contig_1	Pyrodigal	CDS	549242	549565	.	-	0	ID=GCA000153685_00476;Name=HNH endonuclease;locus_tag=GCA000153685_00476;product=HNH endonuclease;Parent=GCA000153685_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898461.1,SO:0001217,UniParc:UPI00005EE3E1,UniRef:UniRef100_A5TZI0,UniRef:UniRef50_A5TZI0,UniRef:UniRef90_A5TZI0
contig_1	Pyrodigal	gene	549694	549924	.	-	.	ID=GCA000153685_00477_gene;locus_tag=GCA000153685_00477
contig_1	Pyrodigal	CDS	549694	549924	.	-	0	ID=GCA000153685_00477;Name=hypothetical protein;locus_tag=GCA000153685_00477;product=hypothetical protein;Parent=GCA000153685_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42AC,UniRef:UniRef100_A0A0H3L655,UniRef:UniRef50_A0A0H3L655,UniRef:UniRef90_A0A0H3L655
contig_1	Pyrodigal	gene	549881	550327	.	-	.	ID=GCA000153685_00478_gene;locus_tag=GCA000153685_00478
contig_1	Pyrodigal	CDS	549881	550327	.	-	0	ID=GCA000153685_00478;Name=DUF5078 domain-containing protein;locus_tag=GCA000153685_00478;product=DUF5078 domain-containing protein;Parent=GCA000153685_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402286.1,SO:0001217,UniParc:UPI0000043EB3,UniRef:UniRef100_O53740,UniRef:UniRef50_A0A1A3THI6,UniRef:UniRef90_A0A1X2LZE1
contig_1	Pyrodigal	gene	550395	551309	.	-	.	ID=GCA000153685_00479_gene;locus_tag=GCA000153685_00479;gene=caiD
contig_1	Pyrodigal	CDS	550395	551309	.	-	0	ID=GCA000153685_00479;Name=crotonase/enoyl-CoA hydratase family protein;locus_tag=GCA000153685_00479;product=crotonase/enoyl-CoA hydratase family protein;gene=caiD;Parent=GCA000153685_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1024,COG:I,RefSeq:WP_003898463.1,SO:0001217,UniParc:UPI00000D5F15,UniRef:UniRef100_O07179,UniRef:UniRef50_O07179,UniRef:UniRef90_O07179
contig_1	Pyrodigal	gene	552092	554122	.	-	.	ID=GCA000153685_00480_gene;locus_tag=GCA000153685_00480
contig_1	Pyrodigal	CDS	552092	554122	.	-	0	ID=GCA000153685_00480;Name=Peptidase;locus_tag=GCA000153685_00480;product=Peptidase;Parent=GCA000153685_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A8EE5,UniRef:UniRef100_A0A0E8U1B7,UniRef:UniRef50_A0A0J6VYI5,UniRef:UniRef90_A0A0U0R236
contig_1	Pyrodigal	gene	554181	555704	.	+	.	ID=GCA000153685_00481_gene;locus_tag=GCA000153685_00481
contig_1	Pyrodigal	CDS	554181	555704	.	+	0	ID=GCA000153685_00481;Name=putative aldehyde dehydrogenase;locus_tag=GCA000153685_00481;product=putative aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0005886,GO:0052167;Parent=GCA000153685_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402294.1,SO:0001217,UniParc:UPI000012928C,UniRef:UniRef100_P9WNY1,UniRef:UniRef50_Q9FDS1,UniRef:UniRef90_P9WNY1;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	555704	556195	.	+	.	ID=GCA000153685_00482_gene;locus_tag=GCA000153685_00482
contig_1	Pyrodigal	CDS	555704	556195	.	+	0	ID=GCA000153685_00482;Name=DUF779 domain-containing protein;locus_tag=GCA000153685_00482;product=DUF779 domain-containing protein;Parent=GCA000153685_00482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898464.1,SO:0001217,UniParc:UPI00000D0F5A,UniRef:UniRef100_O53744,UniRef:UniRef50_A0A0T1WG27,UniRef:UniRef90_O53744
contig_1	Pyrodigal	gene	556216	556494	.	+	.	ID=GCA000153685_00483_gene;locus_tag=GCA000153685_00483
contig_1	Pyrodigal	CDS	556216	556494	.	+	0	ID=GCA000153685_00483;Name=Hydrophobic protein;locus_tag=GCA000153685_00483;product=Hydrophobic protein;Parent=GCA000153685_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898465.1,SO:0001217,UniParc:UPI00000CCB91,UniRef:UniRef100_A0A0H3LCE0,UniRef:UniRef50_A0A0H3LCE0,UniRef:UniRef90_A0A0H3LCE0
contig_1	Pyrodigal	gene	556487	557059	.	+	.	ID=GCA000153685_00484_gene;locus_tag=GCA000153685_00484
contig_1	Pyrodigal	CDS	556487	557059	.	+	0	ID=GCA000153685_00484;Name=Protein Rv0461;locus_tag=GCA000153685_00484;product=Protein Rv0461;Dbxref=GO:0005886;Parent=GCA000153685_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900152.1,SO:0001217,UniParc:UPI0001278068,UniRef:UniRef100_A0A0E9AGB3,UniRef:UniRef50_I6X961,UniRef:UniRef90_I6X961
contig_1	Pyrodigal	gene	557123	558517	.	+	.	ID=GCA000153685_00485_gene;locus_tag=GCA000153685_00485;gene=lpdA
contig_1	Pyrodigal	CDS	557123	558517	.	+	0	ID=GCA000153685_00485;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000153685_00485;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005576,GO:0005829,GO:0005886,GO:0006090,GO:0006103,GO:0015036,GO:0016209,GO:0016655,GO:0035375,GO:0045254,GO:0045454,GO:0050660,GO:0070404;gene=lpdA;Parent=GCA000153685_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00382,RefSeq:WP_003402301.1,SO:0001217,UniParc:UPI000012946A,UniRef:UniRef100_P9WHH9,UniRef:UniRef50_P9WHH9,UniRef:UniRef90_P9WHH9;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	558525	558818	.	+	.	ID=GCA000153685_00486_gene;locus_tag=GCA000153685_00486
contig_1	Pyrodigal	CDS	558525	558818	.	+	0	ID=GCA000153685_00486;Name=Transmembrane protein;locus_tag=GCA000153685_00486;product=Transmembrane protein;Parent=GCA000153685_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402304.1,SO:0001217,UniParc:UPI00000D1040,UniRef:UniRef100_A5TZJ0,UniRef:UniRef50_A0A975JX04,UniRef:UniRef90_A0A8I0EL79
contig_1	Pyrodigal	gene	558822	559394	.	-	.	ID=GCA000153685_00487_gene;locus_tag=GCA000153685_00487
contig_1	Pyrodigal	CDS	558822	559394	.	-	0	ID=GCA000153685_00487;Name=Conserved protein;locus_tag=GCA000153685_00487;product=Conserved protein;Parent=GCA000153685_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402306.1,SO:0001217,UniParc:UPI00000D11E2,UniRef:UniRef100_O53749,UniRef:UniRef50_O53749,UniRef:UniRef90_O53749
contig_1	Pyrodigal	gene	559391	560815	.	-	.	ID=GCA000153685_00488_gene;locus_tag=GCA000153685_00488;gene=ramB
contig_1	Pyrodigal	CDS	559391	560815	.	-	0	ID=GCA000153685_00488;Name=acetate metabolism transcriptional regulator RamB;locus_tag=GCA000153685_00488;product=acetate metabolism transcriptional regulator RamB;Dbxref=GO:0001666,GO:0003677,GO:0003700,GO:0005886,GO:0006355;gene=ramB;Parent=GCA000153685_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3800,COG:R,RefSeq:WP_003898467.1,SO:0001217,UniParc:UPI00000D604F,UniRef:UniRef100_P9WMI1,UniRef:UniRef50_P9WMI1,UniRef:UniRef90_P9WMI1
contig_1	Pyrodigal	gene	560967	561761	.	+	.	ID=GCA000153685_00489_gene;locus_tag=GCA000153685_00489;gene=fatA
contig_1	Pyrodigal	CDS	560967	561761	.	+	0	ID=GCA000153685_00489;Name=Acyl-ACP thioesterase;locus_tag=GCA000153685_00489;product=Acyl-ACP thioesterase;gene=fatA;Parent=GCA000153685_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3884,COG:I,RefSeq:WP_003402311.1,SO:0001217,UniParc:UPI00000D0F46,UniRef:UniRef100_O53751,UniRef:UniRef50_A0A051UGN9,UniRef:UniRef90_B2HQT1
contig_1	Pyrodigal	gene	562036	563322	.	+	.	ID=GCA000153685_00490_gene;locus_tag=GCA000153685_00490;gene=icl
contig_1	Pyrodigal	CDS	562036	563322	.	+	0	ID=GCA000153685_00490;Name=Isocitrate lyase Icl (isocitrase) (isocitratase);locus_tag=GCA000153685_00490;product=Isocitrate lyase Icl (isocitrase) (isocitratase);Dbxref=GO:0004451,GO:0005576,GO:0005829,GO:0005886,GO:0006097,GO:0006099,GO:0006102,GO:0019752,GO:0035375,GO:0046421,GO:0046872,GO:0052572,GO:0071456;gene=icl;Parent=GCA000153685_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2224,KEGG:K01637,RefSeq:WP_003402316.1,SO:0001217,UniParc:UPI0000125205,UniRef:UniRef100_P9WKK7,UniRef:UniRef50_P9WKK7,UniRef:UniRef90_P9WKK7,VFDB:VFC0346,VFDB:VFG001381;ec_number=4.1.3.1
contig_1	Pyrodigal	gene	563404	564264	.	+	.	ID=GCA000153685_00491_gene;locus_tag=GCA000153685_00491;gene=fadB2
contig_1	Pyrodigal	CDS	563404	564264	.	+	0	ID=GCA000153685_00491;Name=3-hydroxybutyryl-CoA dehydrogenase FadB2;locus_tag=GCA000153685_00491;product=3-hydroxybutyryl-CoA dehydrogenase FadB2;Dbxref=GO:0005829,GO:0005886,GO:0006635,GO:0008691,GO:0009274,GO:0019605,GO:0030497,GO:0052572,GO:0070403;gene=fadB2;Parent=GCA000153685_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402318,COG:COG1250,COG:I,RefSeq:WP_003402318.1,SO:0001217,UniParc:UPI00000D6044,UniRef:UniRef100_P9WNP7,UniRef:UniRef50_P9WNP7,UniRef:UniRef90_P9WNP7;ec_number=1.1.1.157
contig_1	Pyrodigal	gene	564397	565257	.	+	.	ID=GCA000153685_00492_gene;locus_tag=GCA000153685_00492;gene=umaA
contig_1	Pyrodigal	CDS	564397	565257	.	+	0	ID=GCA000153685_00492;Name=cyclopropane mycolic acid synthase family methyltransferase;locus_tag=GCA000153685_00492;product=cyclopropane mycolic acid synthase family methyltransferase;Dbxref=GO:0005737,GO:0005886,GO:0008610,GO:0008825,GO:0032259,GO:0071768;gene=umaA;Parent=GCA000153685_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26590,RefSeq:WP_003900153.1,SO:0001217,UniParc:UPI00000D3AF7,UniRef:UniRef100_Q6MX39,UniRef:UniRef50_Q6MX39,UniRef:UniRef90_Q6MX39;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	565357	566220	.	-	.	ID=GCA000153685_00493_gene;locus_tag=GCA000153685_00493;gene=pcaA
contig_1	Pyrodigal	CDS	565357	566220	.	-	0	ID=GCA000153685_00493;Name=cyclopropane mycolic acid synthase;locus_tag=GCA000153685_00493;product=cyclopropane mycolic acid synthase;Dbxref=GO:0005737,GO:0008610,GO:0008825,GO:0032259,GO:0042783,GO:0046500,GO:0052167,GO:0071768;gene=pcaA;Parent=GCA000153685_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402323,RefSeq:WP_003402323.1,SO:0001217,UniParc:UPI00000D5FB5,UniRef:UniRef100_P9WPB3,UniRef:UniRef50_P9WPB3,UniRef:UniRef90_P9WPB3;ec_number=2.1.1.79
contig_1	Pyrodigal	gene	566373	566657	.	-	.	ID=GCA000153685_00494_gene;locus_tag=GCA000153685_00494
contig_1	Pyrodigal	CDS	566373	566657	.	-	0	ID=GCA000153685_00494;Name=Prenyltransferase;locus_tag=GCA000153685_00494;product=Prenyltransferase;Parent=GCA000153685_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C54E52,UniRef:UniRef100_A0A0E7ZFA4,UniRef:UniRef50_A0A0E7ZFA4,UniRef:UniRef90_A0A0E7ZFA4
contig_1	Pyrodigal	gene	566734	567222	.	-	.	ID=GCA000153685_00495_gene;locus_tag=GCA000153685_00495
contig_1	Pyrodigal	CDS	566734	567222	.	-	0	ID=GCA000153685_00495;Name=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;locus_tag=GCA000153685_00495;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;Parent=GCA000153685_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402327.1,SO:0001217,UniParc:UPI00000D1093,UniRef:UniRef100_O53756,UniRef:UniRef50_R4M3V9,UniRef:UniRef90_R4M3V9
contig_1	Pyrodigal	gene	567232	568002	.	-	.	ID=GCA000153685_00496_gene;locus_tag=GCA000153685_00496;gene=acrR
contig_1	Pyrodigal	CDS	567232	568002	.	-	0	ID=GCA000153685_00496;Name=putative HTH-type transcriptional regulator Rv0472c;locus_tag=GCA000153685_00496;product=putative HTH-type transcriptional regulator Rv0472c;Dbxref=GO:0000976,GO:0003700,GO:0005576,GO:0006355;gene=acrR;Parent=GCA000153685_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,SO:0001217,UniParc:UPI00000D4FC3,UniRef:UniRef100_A0A0E8UEX9,UniRef:UniRef50_P9WMD9,UniRef:UniRef90_P9WMD9
contig_1	Pyrodigal	gene	568094	569443	.	+	.	ID=GCA000153685_00497_gene;locus_tag=GCA000153685_00497
contig_1	Pyrodigal	CDS	568094	569443	.	+	0	ID=GCA000153685_00497;Name=Transmembrane protein;locus_tag=GCA000153685_00497;product=Transmembrane protein;Parent=GCA000153685_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005E7F8A5,UniRef:UniRef100_A0A654ZSX3,UniRef:UniRef50_A0A1X0Y728,UniRef:UniRef90_R4LS55
contig_1	Pyrodigal	gene	569530	569952	.	+	.	ID=GCA000153685_00498_gene;locus_tag=GCA000153685_00498
contig_1	Pyrodigal	CDS	569530	569952	.	+	0	ID=GCA000153685_00498;Name=putative HTH-type transcriptional regulator Rv0474;locus_tag=GCA000153685_00498;product=putative HTH-type transcriptional regulator Rv0474;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0009274;Parent=GCA000153685_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402335.1,SO:0001217,UniParc:UPI00000D5F87,UniRef:UniRef100_P9WMH9,UniRef:UniRef50_P9WMH9,UniRef:UniRef90_P9WMH9
contig_1	Pyrodigal	gene	570306	570905	.	+	.	ID=GCA000153685_00499_gene;locus_tag=GCA000153685_00499;gene=hbhA
contig_1	Pyrodigal	CDS	570306	570905	.	+	0	ID=GCA000153685_00499;Name=heparin-binding hemagglutinin HbhA;locus_tag=GCA000153685_00499;product=heparin-binding hemagglutinin HbhA;Dbxref=GO:0007155,GO:0008201,GO:0009986;gene=hbhA;Parent=GCA000153685_00499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402339,BlastRules:WP_010908911,KEGG:K16645,RefSeq:WP_003402339.1,SO:0001217,UniParc:UPI000016522A,UniRef:UniRef100_P9WIP9,UniRef:UniRef50_P9WIP9,UniRef:UniRef90_P9WIP9
contig_1	Pyrodigal	gene	571017	571280	.	+	.	ID=GCA000153685_00500_gene;locus_tag=GCA000153685_00500
contig_1	Pyrodigal	CDS	571017	571280	.	+	0	ID=GCA000153685_00500;Name=putative protein Mb0486;locus_tag=GCA000153685_00500;product=putative protein Mb0486;Dbxref=GO:0016020;Parent=GCA000153685_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402341.1,SO:0001217,UniParc:UPI000013986C,UniRef:UniRef100_P9WKW1,UniRef:UniRef50_Q9CB43,UniRef:UniRef90_P9WKW1
contig_1	Pyrodigal	gene	571285	571731	.	+	.	ID=GCA000153685_00501_gene;locus_tag=GCA000153685_00501
contig_1	Pyrodigal	CDS	571285	571731	.	+	0	ID=GCA000153685_00501;Name=putative protein Rv0477;locus_tag=GCA000153685_00501;product=putative protein Rv0477;Dbxref=GO:0005576;Parent=GCA000153685_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402344.1,SO:0001217,UniParc:UPI0000139870,UniRef:UniRef100_P9WKV9,UniRef:UniRef50_P9WKV9,UniRef:UniRef90_P9WKV9
contig_1	Pyrodigal	gene	571731	572405	.	+	.	ID=GCA000153685_00502_gene;locus_tag=GCA000153685_00502;gene=deoC
contig_1	Pyrodigal	CDS	571731	572405	.	+	0	ID=GCA000153685_00502;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000153685_00502;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000153685_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01619,RefSeq:WP_003402347.1,SO:0001217,UniParc:UPI00001291AC,UniRef:UniRef100_P9WP03,UniRef:UniRef50_C0ZUQ6,UniRef:UniRef90_P9WP03;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	572430	573179	.	-	.	ID=GCA000153685_00503_gene;locus_tag=GCA000153685_00503
contig_1	Pyrodigal	CDS	572430	573179	.	-	0	ID=GCA000153685_00503;Name=Membrane protein;locus_tag=GCA000153685_00503;product=Membrane protein;Parent=GCA000153685_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021786CA,UniRef:UniRef100_A0A0E8WBQ7,UniRef:UniRef50_A0A0E8WBQ7,UniRef:UniRef90_A0A0E8WBQ7
contig_1	Pyrodigal	gene	573473	574315	.	-	.	ID=GCA000153685_00504_gene;locus_tag=GCA000153685_00504
contig_1	Pyrodigal	CDS	573473	574315	.	-	0	ID=GCA000153685_00504;Name=Hydrolase Rv0480c;locus_tag=GCA000153685_00504;product=Hydrolase Rv0480c;Dbxref=GO:0009274,GO:0016787;Parent=GCA000153685_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402350.1,SO:0001217,UniParc:UPI000022005E,UniRef:UniRef100_P9WJ01,UniRef:UniRef50_P9WJ01,UniRef:UniRef90_P9WJ01;ec_number=3.5.-.-
contig_1	Pyrodigal	gene	574441	574965	.	-	.	ID=GCA000153685_00505_gene;locus_tag=GCA000153685_00505
contig_1	Pyrodigal	CDS	574441	574965	.	-	0	ID=GCA000153685_00505;Name=putative protein Mb0491c;locus_tag=GCA000153685_00505;product=putative protein Mb0491c;Dbxref=GO:0005886,GO:0051701;Parent=GCA000153685_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402351.1,SO:0001217,UniParc:UPI000013987E,UniRef:UniRef100_P9WKV5,UniRef:UniRef50_P9WKV5,UniRef:UniRef90_P9WKV5
contig_1	Pyrodigal	gene	574992	576101	.	+	.	ID=GCA000153685_00506_gene;locus_tag=GCA000153685_00506;gene=murB
contig_1	Pyrodigal	CDS	574992	576101	.	+	0	ID=GCA000153685_00506;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000153685_00506;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0050660,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000153685_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402354.1,SO:0001217,UniParc:UPI000012F93B,UniRef:UniRef100_P9WJL9,UniRef:UniRef50_P9WJL9,UniRef:UniRef90_P9WJL9;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	576163	577518	.	+	.	ID=GCA000153685_00507_gene;locus_tag=GCA000153685_00507;gene=ldtMt5
contig_1	Pyrodigal	CDS	576163	577518	.	+	0	ID=GCA000153685_00507;Name=L%2CD-transpeptidase LdtMt5;locus_tag=GCA000153685_00507;product=L%2CD-transpeptidase LdtMt5;Dbxref=GO:0005576,GO:0008360,GO:0016746,GO:0018104,GO:0071555,GO:0071972;gene=ldtMt5;Parent=GCA000153685_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402357,RefSeq:WP_003402357.1,SO:0001217,UniParc:UPI0000139886,UniRef:UniRef100_P9WKV3,UniRef:UniRef50_P9WKV3,UniRef:UniRef90_P9WKV3;ec_number=2.3.2.-
contig_1	Pyrodigal	gene	577499	578254	.	-	.	ID=GCA000153685_00508_gene;locus_tag=GCA000153685_00508
contig_1	Pyrodigal	CDS	577499	578254	.	-	0	ID=GCA000153685_00508;Name=putative oxidoreductase Rv0484c;locus_tag=GCA000153685_00508;product=putative oxidoreductase Rv0484c;Dbxref=GO:0005886,GO:0016616;Parent=GCA000153685_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900154.1,SO:0001217,UniParc:UPI0000139889,UniRef:UniRef100_P9WGR5,UniRef:UniRef50_P9WGR5,UniRef:UniRef90_P9WGR5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	578437	579753	.	+	.	ID=GCA000153685_00509_gene;locus_tag=GCA000153685_00509
contig_1	Pyrodigal	CDS	578437	579753	.	+	0	ID=GCA000153685_00509;Name=transcriptional regulator;locus_tag=GCA000153685_00509;product=transcriptional regulator;Dbxref=GO:0003677;Parent=GCA000153685_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402361,RefSeq:WP_003402361.1,SO:0001217,UniParc:UPI000013988D,UniRef:UniRef100_P9WKV1,UniRef:UniRef50_P9WKV1,UniRef:UniRef90_P9WKV1
contig_1	Pyrodigal	gene	579810	581243	.	+	.	ID=GCA000153685_00510_gene;locus_tag=GCA000153685_00510;gene=mshA
contig_1	Pyrodigal	CDS	579810	581243	.	+	0	ID=GCA000153685_00510;Name=D-inositol-3-phosphate glycosyltransferase;locus_tag=GCA000153685_00510;product=D-inositol-3-phosphate glycosyltransferase;Dbxref=GO:0000287,GO:0008375,GO:0010125,GO:0102710;gene=mshA;Parent=GCA000153685_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15521,SO:0001217,UniParc:UPI0002E6E140,UniRef:UniRef100_A0A0E9AGW7,UniRef:UniRef50_P9WMY7,UniRef:UniRef90_P9WMY7;ec_number=2.4.1.250
contig_1	Pyrodigal	gene	581240	581791	.	+	.	ID=GCA000153685_00511_gene;locus_tag=GCA000153685_00511
contig_1	Pyrodigal	CDS	581240	581791	.	+	0	ID=GCA000153685_00511;Name=putative protein Mb0497;locus_tag=GCA000153685_00511;product=putative protein Mb0497;Parent=GCA000153685_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402370.1,SO:0001217,UniParc:UPI0000139893,UniRef:UniRef100_P9WKU9,UniRef:UniRef50_P9WKU9,UniRef:UniRef90_P9WKU9
contig_1	Pyrodigal	gene	582038	582664	.	+	.	ID=GCA000153685_00512_gene;locus_tag=GCA000153685_00512;gene=lysE
contig_1	Pyrodigal	CDS	582038	582664	.	+	0	ID=GCA000153685_00512;Name=L-lysine exporter;locus_tag=GCA000153685_00512;product=L-lysine exporter;Dbxref=GO:0005886,GO:0015171,GO:0016020;gene=lysE;Parent=GCA000153685_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06895,SO:0001217,UniParc:UPI00005EE3EB,UniRef:UniRef100_A0A655DU26,UniRef:UniRef50_P9WK31,UniRef:UniRef90_P9WK33
contig_1	Pyrodigal	gene	582800	583570	.	+	.	ID=GCA000153685_00513_gene;locus_tag=GCA000153685_00513;gene=gpmA
contig_1	Pyrodigal	CDS	582800	583570	.	+	0	ID=GCA000153685_00513;Name=phosphoglyceromutase;locus_tag=GCA000153685_00513;product=phosphoglyceromutase;Dbxref=GO:0004619,GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000153685_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01834,SO:0001217,UniParc:UPI0001900D44,UniRef:UniRef100_A0A0H3L690,UniRef:UniRef50_P00950,UniRef:UniRef90_P9WIC9;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	583744	584976	.	+	.	ID=GCA000153685_00514_gene;locus_tag=GCA000153685_00514;gene=senX3
contig_1	Pyrodigal	CDS	583744	584976	.	+	0	ID=GCA000153685_00514;Name=two-component system sensor histidine kinase SenX3;locus_tag=GCA000153685_00514;product=two-component system sensor histidine kinase SenX3;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005576,GO:0005886,GO:0009927,GO:1990748;gene=senX3;Parent=GCA000153685_00514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402390,BlastRules:WP_014876913,RefSeq:WP_003900157.1,SO:0001217,UniParc:UPI000127809A,UniRef:UniRef100_UPI000127809A,UniRef:UniRef50_P9WGK5,UniRef:UniRef90_P9WGK5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	585180	585863	.	+	.	ID=GCA000153685_00515_gene;locus_tag=GCA000153685_00515;gene=regX
contig_1	Pyrodigal	CDS	585180	585863	.	+	0	ID=GCA000153685_00515;Name=two-component sensory transduction protein RegX;locus_tag=GCA000153685_00515;product=two-component sensory transduction protein RegX;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0003677,GO:0005829,GO:0006355,GO:0019220,GO:0032993;gene=regX;Parent=GCA000153685_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402393,BlastRules:WP_014876914,COG:COG0745,COG:TK,KEGG:K07776,RefSeq:WP_003402393.1,SO:0001217,UniParc:UPI0000133841,UniRef:UniRef100_P9WGL9,UniRef:UniRef50_P9WGL9,UniRef:UniRef90_P9WGL9
contig_1	Pyrodigal	gene	585860	587749	.	-	.	ID=GCA000153685_00516_gene;locus_tag=GCA000153685_00516
contig_1	Pyrodigal	CDS	585860	587749	.	-	0	ID=GCA000153685_00516;Name=putative GMC-type oxidoreductase Rv0492c;locus_tag=GCA000153685_00516;product=putative GMC-type oxidoreductase Rv0492c;Dbxref=GO:0005829,GO:0016614,GO:0050660;Parent=GCA000153685_00516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908534.1,SO:0001217,UniParc:UPI00001398A0,UniRef:UniRef100_P9WMV7,UniRef:UniRef50_P9WMV7,UniRef:UniRef90_P9WMV7;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	587746	588075	.	-	.	ID=GCA000153685_00517_gene;locus_tag=GCA000153685_00517
contig_1	Pyrodigal	CDS	587746	588075	.	-	0	ID=GCA000153685_00517;Name=Lycopene cyclase domain-containing protein;locus_tag=GCA000153685_00517;product=Lycopene cyclase domain-containing protein;Parent=GCA000153685_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402400.1,SO:0001217,UniParc:UPI00001A8EEB,UniRef:UniRef100_Q6MX36,UniRef:UniRef50_A0A386U1F4,UniRef:UniRef90_Q6MX36
contig_1	Pyrodigal	gene	588072	589022	.	-	.	ID=GCA000153685_00518_gene;locus_tag=GCA000153685_00518
contig_1	Pyrodigal	CDS	588072	589022	.	-	0	ID=GCA000153685_00518;Name=putative protein Rv0493c;locus_tag=GCA000153685_00518;product=putative protein Rv0493c;Parent=GCA000153685_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911182.1,SO:0001217,UniParc:UPI00005F6113,UniRef:UniRef100_A0A0H3L696,UniRef:UniRef50_P9WKU7,UniRef:UniRef90_P9WKU7
contig_1	Pyrodigal	gene	589078	589794	.	+	.	ID=GCA000153685_00519_gene;locus_tag=GCA000153685_00519
contig_1	Pyrodigal	CDS	589078	589794	.	+	0	ID=GCA000153685_00519;Name=putative HTH-type transcriptional regulator Rv0494;locus_tag=GCA000153685_00519;product=putative HTH-type transcriptional regulator Rv0494;Dbxref=GO:0003677,GO:0003700;Parent=GCA000153685_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898483.1,SO:0001217,UniParc:UPI0000EF4804,UniRef:UniRef100_P9WMG7,UniRef:UniRef50_P9WMG7,UniRef:UniRef90_P9WMG7
contig_1	Pyrodigal	gene	589795	590565	.	-	.	ID=GCA000153685_00520_gene;locus_tag=GCA000153685_00520
contig_1	Pyrodigal	CDS	589795	590565	.	-	0	ID=GCA000153685_00520;Name=putative redox regulatory protein Rv0495c;locus_tag=GCA000153685_00520;product=putative redox regulatory protein Rv0495c;Parent=GCA000153685_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3EE,UniRef:UniRef100_A0A0H3L5Q6,UniRef:UniRef50_P9WKU5,UniRef:UniRef90_P9WKU5
contig_1	Pyrodigal	gene	590717	591751	.	+	.	ID=GCA000153685_00521_gene;locus_tag=GCA000153685_00521;gene=ppx1
contig_1	Pyrodigal	CDS	590717	591751	.	+	0	ID=GCA000153685_00521;Name=exopolyphosphatase Ppx1;locus_tag=GCA000153685_00521;product=exopolyphosphatase Ppx1;Dbxref=GO:0004309,GO:0016462;gene=ppx1;Parent=GCA000153685_00521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402419,KEGG:K01524,RefSeq:WP_003402419.1,SO:0001217,UniParc:UPI00001398B1,UniRef:UniRef100_P9WHV5,UniRef:UniRef50_P9WHV5,UniRef:UniRef90_P9WHV5;ec_number=3.6.1.11
contig_1	Pyrodigal	gene	591748	592680	.	+	.	ID=GCA000153685_00522_gene;locus_tag=GCA000153685_00522
contig_1	Pyrodigal	CDS	591748	592680	.	+	0	ID=GCA000153685_00522;Name=putative protein Rv0497;locus_tag=GCA000153685_00522;product=putative protein Rv0497;Dbxref=GO:0005886,GO:0009274,GO:0051701;Parent=GCA000153685_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402426.1,SO:0001217,UniParc:UPI00001398B4,UniRef:UniRef100_P9WKU3,UniRef:UniRef50_P9WKU3,UniRef:UniRef90_P9WKU3
contig_1	Pyrodigal	gene	592696	593538	.	+	.	ID=GCA000153685_00523_gene;locus_tag=GCA000153685_00523;gene=ycjR
contig_1	Pyrodigal	CDS	592696	593538	.	+	0	ID=GCA000153685_00523;Name=putative protein Mb0509;locus_tag=GCA000153685_00523;product=putative protein Mb0509;gene=ycjR;Parent=GCA000153685_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,RefSeq:WP_003402432.1,SO:0001217,UniParc:UPI00001398B8,UniRef:UniRef100_P9WKU1,UniRef:UniRef50_P54581,UniRef:UniRef90_P9WKU1
contig_1	Pyrodigal	gene	593554	594429	.	+	.	ID=GCA000153685_00524_gene;locus_tag=GCA000153685_00524
contig_1	Pyrodigal	CDS	593554	594429	.	+	0	ID=GCA000153685_00524;Name=putative protein Mb0510;locus_tag=GCA000153685_00524;product=putative protein Mb0510;Dbxref=GO:0016301;Parent=GCA000153685_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402433.1,SO:0001217,UniParc:UPI00001398BA,UniRef:UniRef100_P9WKT9,UniRef:UniRef50_P9WKT9,UniRef:UniRef90_P9WKT9
contig_1	Pyrodigal	gene	594454	595341	.	+	.	ID=GCA000153685_00525_gene;locus_tag=GCA000153685_00525;gene=proC
contig_1	Pyrodigal	CDS	594454	595341	.	+	0	ID=GCA000153685_00525;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000153685_00525;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0000287,GO:0004735,GO:0005737,GO:0005886,GO:0006561,GO:0030145,GO:0055129;gene=proC;Parent=GCA000153685_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00286,RefSeq:WP_003900159.1,SO:0001217,UniParc:UPI00001322FD,UniRef:UniRef100_P9WHU7,UniRef:UniRef50_P9WHU7,UniRef:UniRef90_P9WHU7;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	595482	595718	.	+	.	ID=GCA000153685_00526_gene;locus_tag=GCA000153685_00526
contig_1	Pyrodigal	CDS	595482	595718	.	+	0	ID=GCA000153685_00526;Name=Putative DNA-binding protein Rv0500A;locus_tag=GCA000153685_00526;product=Putative DNA-binding protein Rv0500A;Dbxref=GO:0003677;Parent=GCA000153685_00526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402437.1,SO:0001217,UniParc:UPI00000D2B6B,UniRef:UniRef100_P9WKT7,UniRef:UniRef50_P9WKT7,UniRef:UniRef90_P9WKT7
contig_1	Pyrodigal	gene	595846	595947	.	+	.	ID=GCA000153685_00527_gene;locus_tag=GCA000153685_00527
contig_1	Pyrodigal	CDS	595846	595947	.	+	0	ID=GCA000153685_00527;Name=30S ribosomal protein bS22;locus_tag=GCA000153685_00527;product=30S ribosomal protein bS22;Parent=GCA000153685_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402602.1,SO:0001217,UniParc:UPI0000139A1B,UniRef:UniRef100_P0A5D0,UniRef:UniRef50_P0A5D0,UniRef:UniRef90_P0A5D0
contig_1	Pyrodigal	gene	596025	597155	.	+	.	ID=GCA000153685_00528_gene;locus_tag=GCA000153685_00528
contig_1	Pyrodigal	CDS	596025	597155	.	+	0	ID=GCA000153685_00528;Name=putative protein Mb0513;locus_tag=GCA000153685_00528;product=putative protein Mb0513;Dbxref=GO:0005576,GO:0005829,GO:0005886;Parent=GCA000153685_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402607.1,SO:0001217,UniParc:UPI0000139A02,UniRef:UniRef100_P9WKT3,UniRef:UniRef50_P9WKT3,UniRef:UniRef90_P9WKT3
contig_1	Pyrodigal	gene	597162	598238	.	+	.	ID=GCA000153685_00529_gene;locus_tag=GCA000153685_00529
contig_1	Pyrodigal	CDS	597162	598238	.	+	0	ID=GCA000153685_00529;Name=putative protein Rv0502;locus_tag=GCA000153685_00529;product=putative protein Rv0502;Dbxref=GO:0005886,GO:0016020,GO:0016746;Parent=GCA000153685_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898486.1,SO:0001217,UniParc:UPI0000139A05,UniRef:UniRef100_P9WKT1,UniRef:UniRef50_P9WKT1,UniRef:UniRef90_P9WKT1
contig_1	Pyrodigal	gene	598242	599150	.	-	.	ID=GCA000153685_00530_gene;locus_tag=GCA000153685_00530;gene=cmaA2
contig_1	Pyrodigal	CDS	598242	599150	.	-	0	ID=GCA000153685_00530;Name=cyclopropane mycolic acid synthase family methyltransferase;locus_tag=GCA000153685_00530;product=cyclopropane mycolic acid synthase family methyltransferase;Dbxref=GO:0001666,GO:0005829,GO:0005886,GO:0008610,GO:0008825,GO:0032259,GO:0046500,GO:0052167,GO:0071766,GO:0071768,GO:0071769;gene=cmaA2;Parent=GCA000153685_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26596,RefSeq:WP_003402621.1,SO:0001217,UniParc:UPI000012752A,UniRef:UniRef100_P9WPB5,UniRef:UniRef50_P9WPB5,UniRef:UniRef90_P9WPB5;ec_number=2.1.1.79
contig_1	Pyrodigal	gene	599173	599673	.	-	.	ID=GCA000153685_00531_gene;locus_tag=GCA000153685_00531
contig_1	Pyrodigal	CDS	599173	599673	.	-	0	ID=GCA000153685_00531;Name=UPF0336 protein Rv0504c;locus_tag=GCA000153685_00531;product=UPF0336 protein Rv0504c;Dbxref=GO:0005886,GO:0006633,GO:0009274,GO:0019171;Parent=GCA000153685_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27074,RefSeq:WP_003402626.1,SO:0001217,UniParc:UPI0000139A0D,UniRef:UniRef100_P9WFK3,UniRef:UniRef50_P9WFK3,UniRef:UniRef90_P9WFK3;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	599835	600758	.	-	.	ID=GCA000153685_00532_gene;locus_tag=GCA000153685_00532;gene=serB1
contig_1	Pyrodigal	CDS	599835	600758	.	-	0	ID=GCA000153685_00532;Name=Phosphoserine phosphatase SerB1;locus_tag=GCA000153685_00532;product=Phosphoserine phosphatase SerB1;Dbxref=GO:0005886,GO:0036424,GO:0046872;gene=serB1;Parent=GCA000153685_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913584.1,SO:0001217,UniParc:UPI0001E62122,UniRef:UniRef100_P9WGJ3,UniRef:UniRef50_P9WGJ3,UniRef:UniRef90_P9WGJ3;ec_number=3.1.3.3
contig_1	Pyrodigal	gene	601136	601573	.	+	.	ID=GCA000153685_00533_gene;locus_tag=GCA000153685_00533;gene=mmpS2
contig_1	Pyrodigal	CDS	601136	601573	.	+	0	ID=GCA000153685_00533;Name=putative transport accessory protein MmpS2;locus_tag=GCA000153685_00533;product=putative transport accessory protein MmpS2;Dbxref=GO:0005576,GO:0005886;gene=mmpS2;Parent=GCA000153685_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000012F28A,UniRef:UniRef100_P9WJT3,UniRef:UniRef50_P9WJT3,UniRef:UniRef90_P9WJT3
contig_1	Pyrodigal	gene	601570	604476	.	+	.	ID=GCA000153685_00534_gene;locus_tag=GCA000153685_00534;gene=mmpL2
contig_1	Pyrodigal	CDS	601570	604476	.	+	0	ID=GCA000153685_00534;Name=RND transporter MmpL2;locus_tag=GCA000153685_00534;product=RND transporter MmpL2;Dbxref=GO:0005886,GO:0009274,GO:0051701;gene=mmpL2;Parent=GCA000153685_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911183,RefSeq:WP_003900161.1,SO:0001217,UniParc:UPI00005EE3F3,UniRef:UniRef100_A0A0H3L5R9,UniRef:UniRef50_P9WJV1,UniRef:UniRef90_P9WJV7
contig_1	Pyrodigal	gene	604484	604762	.	+	.	ID=GCA000153685_00535_gene;locus_tag=GCA000153685_00535
contig_1	Pyrodigal	CDS	604484	604762	.	+	0	ID=GCA000153685_00535;Name=putative protein Rv0508;locus_tag=GCA000153685_00535;product=putative protein Rv0508;Dbxref=GO:0005886;Parent=GCA000153685_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3F4,UniRef:UniRef100_A0A0E8VAP9,UniRef:UniRef50_P9WKS9,UniRef:UniRef90_P9WKS9
contig_1	Pyrodigal	gene	604812	606218	.	+	.	ID=GCA000153685_00536_gene;locus_tag=GCA000153685_00536;gene=hemA
contig_1	Pyrodigal	CDS	604812	606218	.	+	0	ID=GCA000153685_00536;Name=glutamyl-tRNA reductase;locus_tag=GCA000153685_00536;product=glutamyl-tRNA reductase;Dbxref=GO:0008883,GO:0019353,GO:0050661;gene=hemA;Parent=GCA000153685_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02492,RefSeq:WP_003402699.1,SO:0001217,UniParc:UPI000012C423,UniRef:UniRef100_P9WMP7,UniRef:UniRef50_P9WMP7,UniRef:UniRef90_P9WMP7;ec_number=1.2.1.70
contig_1	Pyrodigal	gene	606228	607157	.	+	.	ID=GCA000153685_00537_gene;locus_tag=GCA000153685_00537;gene=hemC
contig_1	Pyrodigal	CDS	606228	607157	.	+	0	ID=GCA000153685_00537;Name=hydroxymethylbilane synthase;locus_tag=GCA000153685_00537;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0005737,GO:0006782,GO:0033014;gene=hemC;Parent=GCA000153685_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,RefSeq:WP_003402702.1,SO:0001217,UniParc:UPI000012C482,UniRef:UniRef100_P9WMP3,UniRef:UniRef50_P9WMP3,UniRef:UniRef90_P9WMP3;ec_number=2.5.1.61
contig_1	Pyrodigal	gene	607190	608887	.	+	.	ID=GCA000153685_00538_gene;locus_tag=GCA000153685_00538
contig_1	Pyrodigal	CDS	607190	608887	.	+	0	ID=GCA000153685_00538;Name=Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase;locus_tag=GCA000153685_00538;product=Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase;Parent=GCA000153685_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13542,RefSeq:WP_003900163.1,SO:0001217,UniParc:UPI0000165230,UniRef:UniRef100_Q7D9R0,UniRef:UniRef50_H5US28,UniRef:UniRef90_Q7D9R0;ec_number=4.2.1.75
contig_1	Pyrodigal	gene	609075	609962	.	+	.	ID=GCA000153685_00539_gene;locus_tag=GCA000153685_00539;gene=hemB
contig_1	Pyrodigal	CDS	609075	609962	.	+	0	ID=GCA000153685_00539;Name=porphobilinogen synthase;locus_tag=GCA000153685_00539;product=porphobilinogen synthase;Dbxref=GO:0003824,GO:0004655,GO:0005829,GO:0006782,GO:0006783,GO:0008270,GO:0009274,GO:0033014,GO:0046872;gene=hemB;Parent=GCA000153685_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01698,SO:0001217,UniRef:UniRef50_P9WMP5,UniRef:UniRef90_P9WMP5;ec_number=4.2.1.24
contig_1	Pyrodigal	gene	609975	610523	.	+	.	ID=GCA000153685_00540_gene;locus_tag=GCA000153685_00540
contig_1	Pyrodigal	CDS	609975	610523	.	+	0	ID=GCA000153685_00540;Name=putative conserved transmembrane protein;locus_tag=GCA000153685_00540;product=putative conserved transmembrane protein;Parent=GCA000153685_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402713.1,SO:0001217,UniParc:UPI00000D11C5,UniRef:UniRef100_O33358,UniRef:UniRef50_A0A1X1ZTA8,UniRef:UniRef90_O33358
contig_1	Pyrodigal	gene	610520	610819	.	+	.	ID=GCA000153685_00541_gene;locus_tag=GCA000153685_00541
contig_1	Pyrodigal	CDS	610520	610819	.	+	0	ID=GCA000153685_00541;Name=putative transmembrane protein;locus_tag=GCA000153685_00541;product=putative transmembrane protein;Parent=GCA000153685_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402715.1,SO:0001217,UniParc:UPI00000D0F77,UniRef:UniRef100_O33359,UniRef:UniRef50_A0A498PRW7,UniRef:UniRef90_O33359
contig_1	Pyrodigal	gene	610991	612433	.	+	.	ID=GCA000153685_00542_gene;locus_tag=GCA000153685_00542
contig_1	Pyrodigal	CDS	610991	612433	.	+	0	ID=GCA000153685_00542;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_00542;product=HNH nuclease domain-containing protein;Parent=GCA000153685_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6117,UniRef:UniRef100_A0AA44RJP8,UniRef:UniRef50_A0A051UIA2,UniRef:UniRef90_Q7D9Q7
contig_1	Pyrodigal	gene	612430	612906	.	-	.	ID=GCA000153685_00543_gene;locus_tag=GCA000153685_00543;gene=oprA
contig_1	Pyrodigal	CDS	612430	612906	.	-	0	ID=GCA000153685_00543;Name=Osmosensory protein A;locus_tag=GCA000153685_00543;product=Osmosensory protein A;gene=oprA;Parent=GCA000153685_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402807.1,SO:0001217,UniParc:UPI0000165232,UniRef:UniRef100_O33361,UniRef:UniRef50_O33361,UniRef:UniRef90_O33361
contig_1	Pyrodigal	gene	613195	614427	.	+	.	ID=GCA000153685_00544_gene;locus_tag=GCA000153685_00544
contig_1	Pyrodigal	CDS	613195	614427	.	+	0	ID=GCA000153685_00544;Name=putative membrane acyltransferase;locus_tag=GCA000153685_00544;product=putative membrane acyltransferase;Parent=GCA000153685_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003916685.1,SO:0001217,UniParc:UPI0000164F85,UniRef:UniRef100_A0A0H3L5T0,UniRef:UniRef50_Q73SR5,UniRef:UniRef90_O33362
contig_1	Pyrodigal	gene	614559	615254	.	+	.	ID=GCA000153685_00545_gene;locus_tag=GCA000153685_00545
contig_1	Pyrodigal	CDS	614559	615254	.	+	0	ID=GCA000153685_00545;Name=Rv0518 family GDSL lipase;locus_tag=GCA000153685_00545;product=Rv0518 family GDSL lipase;Dbxref=GO:0005576,GO:0016042,GO:0052689;Parent=GCA000153685_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402818.1,SO:0001217,UniParc:UPI00000D1077,UniRef:UniRef100_O33363,UniRef:UniRef50_O33363,UniRef:UniRef90_O33363;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	615306	615422	.	-	.	ID=GCA000153685_00546_gene;locus_tag=GCA000153685_00546
contig_1	Pyrodigal	CDS	615306	615422	.	-	0	ID=GCA000153685_00546;Name=Transmembrane protein;locus_tag=GCA000153685_00546;product=Transmembrane protein;Parent=GCA000153685_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B6D,UniRef:UniRef100_A0A0H3L9R1,UniRef:UniRef50_A0A024JUE9,UniRef:UniRef90_A0A0H3L9R1
contig_1	Pyrodigal	gene	615543	616400	.	-	.	ID=GCA000153685_00547_gene;locus_tag=GCA000153685_00547
contig_1	Pyrodigal	CDS	615543	616400	.	-	0	ID=GCA000153685_00547;Name=Acyl-CoA:diacylglycerol acyltransferase;locus_tag=GCA000153685_00547;product=Acyl-CoA:diacylglycerol acyltransferase;Parent=GCA000153685_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912593.1,SO:0001217,UniParc:UPI0001E61EBA,UniRef:UniRef100_O33364,UniRef:UniRef50_A0A1A2PX54,UniRef:UniRef90_O33364
contig_1	Pyrodigal	gene	616626	616976	.	+	.	ID=GCA000153685_00548_gene;locus_tag=GCA000153685_00548
contig_1	Pyrodigal	CDS	616626	616976	.	+	0	ID=GCA000153685_00548;Name=Methyltransferase/methylase;locus_tag=GCA000153685_00548;product=Methyltransferase/methylase;Parent=GCA000153685_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402827.1,SO:0001217,UniParc:UPI00000D601B,UniRef:UniRef100_O33365,UniRef:UniRef50_A0A655JHJ0,UniRef:UniRef90_A0A655JHJ0
contig_1	Pyrodigal	gene	616969	617274	.	+	.	ID=GCA000153685_00549_gene;locus_tag=GCA000153685_00549
contig_1	Pyrodigal	CDS	616969	617274	.	+	0	ID=GCA000153685_00549;Name=Methyltransferase;locus_tag=GCA000153685_00549;product=Methyltransferase;Parent=GCA000153685_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898493.1,SO:0001217,UniParc:UPI00000D2B6E,UniRef:UniRef100_L7N6C0,UniRef:UniRef50_A0A829C8Z8,UniRef:UniRef90_A0A829C8Z8
contig_1	Pyrodigal	gene	617409	618713	.	+	.	ID=GCA000153685_00550_gene;locus_tag=GCA000153685_00550;gene=gabP
contig_1	Pyrodigal	CDS	617409	618713	.	+	0	ID=GCA000153685_00550;Name=Gaba permease GabP;locus_tag=GCA000153685_00550;product=Gaba permease GabP;gene=gabP;Parent=GCA000153685_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900165.1,SO:0001217,UniParc:UPI00000D2B6F,UniRef:UniRef100_A5TZQ2,UniRef:UniRef50_P46349,UniRef:UniRef90_A5TZQ2
contig_1	Pyrodigal	gene	618697	619092	.	-	.	ID=GCA000153685_00551_gene;locus_tag=GCA000153685_00551
contig_1	Pyrodigal	CDS	618697	619092	.	-	0	ID=GCA000153685_00551;Name=Conserved protein;locus_tag=GCA000153685_00551;product=Conserved protein;Parent=GCA000153685_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402842.1,SO:0001217,UniParc:UPI0000165233,UniRef:UniRef100_O06389,UniRef:UniRef50_O06389,UniRef:UniRef90_O06389
contig_1	Pyrodigal	gene	619206	620594	.	+	.	ID=GCA000153685_00552_gene;locus_tag=GCA000153685_00552;gene=hemL
contig_1	Pyrodigal	CDS	619206	620594	.	+	0	ID=GCA000153685_00552;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000153685_00552;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL;Parent=GCA000153685_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402844.1,SO:0001217,UniParc:UPI000012BB89,UniRef:UniRef100_P9WMN9,UniRef:UniRef50_P9WMN9,UniRef:UniRef90_P9WMN9;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	620594	621202	.	+	.	ID=GCA000153685_00553_gene;locus_tag=GCA000153685_00553
contig_1	Pyrodigal	CDS	620594	621202	.	+	0	ID=GCA000153685_00553;Name=putative protein Rv0525;locus_tag=GCA000153685_00553;product=putative protein Rv0525;Dbxref=GO:0005737,GO:0005886,GO:0016791;Parent=GCA000153685_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402845.1,SO:0001217,UniParc:UPI00000C14CE,UniRef:UniRef100_O06391,UniRef:UniRef50_O06391,UniRef:UniRef90_O06391
contig_1	Pyrodigal	gene	621256	621867	.	+	.	ID=GCA000153685_00554_gene;locus_tag=GCA000153685_00554
contig_1	Pyrodigal	CDS	621256	621867	.	+	0	ID=GCA000153685_00554;Name=putative thioredoxin protein (Thiol-disulfide interchange protein);locus_tag=GCA000153685_00554;product=putative thioredoxin protein (Thiol-disulfide interchange protein);Parent=GCA000153685_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911234.1,SO:0001217,UniParc:UPI00005EE3F7,UniRef:UniRef100_O06392,UniRef:UniRef50_O06392,UniRef:UniRef90_O06392
contig_1	Pyrodigal	gene	621864	622643	.	+	.	ID=GCA000153685_00555_gene;locus_tag=GCA000153685_00555;gene=ccdA
contig_1	Pyrodigal	CDS	621864	622643	.	+	0	ID=GCA000153685_00555;Name=putative cytochrome C-type biogenesis protein CcdA;locus_tag=GCA000153685_00555;product=putative cytochrome C-type biogenesis protein CcdA;gene=ccdA;Parent=GCA000153685_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402847.1,SO:0001217,UniParc:UPI00000D5FFE,UniRef:UniRef100_L7N671,UniRef:UniRef50_S2YU56,UniRef:UniRef90_L7N671
contig_1	Pyrodigal	gene	622676	624265	.	+	.	ID=GCA000153685_00556_gene;locus_tag=GCA000153685_00556
contig_1	Pyrodigal	CDS	622676	624265	.	+	0	ID=GCA000153685_00556;Name=ResB-like domain-containing protein;locus_tag=GCA000153685_00556;product=ResB-like domain-containing protein;Parent=GCA000153685_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07399,RefSeq:WP_003402848.1,SO:0001217,UniParc:UPI00000CCB0D,UniRef:UniRef100_A0A0H3L9R8,UniRef:UniRef50_A0A143Q312,UniRef:UniRef90_Q7D9P8
contig_1	Pyrodigal	gene	624262	625236	.	+	.	ID=GCA000153685_00557_gene;locus_tag=GCA000153685_00557;gene=ccsB
contig_1	Pyrodigal	CDS	624262	625236	.	+	0	ID=GCA000153685_00557;Name=c-type cytochrome biogenesis protein CcsB;locus_tag=GCA000153685_00557;product=c-type cytochrome biogenesis protein CcsB;Dbxref=GO:0017004,GO:0020037;gene=ccsB;Parent=GCA000153685_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402849.1,SO:0001217,UniParc:UPI00000D6055,UniRef:UniRef100_O06393,UniRef:UniRef50_O06393,UniRef:UniRef90_O06393
contig_1	Pyrodigal	gene	625284	626495	.	+	.	ID=GCA000153685_00558_gene;locus_tag=GCA000153685_00558
contig_1	Pyrodigal	CDS	625284	626495	.	+	0	ID=GCA000153685_00558;Name=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;locus_tag=GCA000153685_00558;product=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;Parent=GCA000153685_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00039EE747,UniRef:UniRef100_A0A0E8X250,UniRef:UniRef50_A0AAD1H3A2,UniRef:UniRef90_A0A0H3LCJ3
contig_1	Pyrodigal	gene	626492	626653	.	-	.	ID=GCA000153685_00559_gene;locus_tag=GCA000153685_00559
contig_1	Pyrodigal	CDS	626492	626653	.	-	0	ID=GCA000153685_00559;Name=Conserved protein;locus_tag=GCA000153685_00559;product=Conserved protein;Parent=GCA000153685_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402851.1,SO:0001217,UniParc:UPI00000D2B72,UniRef:UniRef100_V5QPR5,UniRef:UniRef50_I7F790,UniRef:UniRef90_V5QPR5
contig_1	Pyrodigal	gene	626700	627017	.	+	.	ID=GCA000153685_00560_gene;locus_tag=GCA000153685_00560
contig_1	Pyrodigal	CDS	626700	627017	.	+	0	ID=GCA000153685_00560;Name=putative conserved membrane protein;locus_tag=GCA000153685_00560;product=putative conserved membrane protein;Parent=GCA000153685_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402853.1,SO:0001217,UniParc:UPI00000D1070,UniRef:UniRef100_O06397,UniRef:UniRef50_J5EQX1,UniRef:UniRef90_O06397
contig_1	Pyrodigal	gene	627164	629032	.	+	.	ID=GCA000153685_00561_gene;locus_tag=GCA000153685_00561
contig_1	Pyrodigal	CDS	627164	629032	.	+	0	ID=GCA000153685_00561;Name=PE family protein;locus_tag=GCA000153685_00561;product=PE family protein;Parent=GCA000153685_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938238.1,SO:0001217,UniParc:UPI00005EE3F9,UniRef:UniRef100_A0AA44LKL4,UniRef:UniRef50_A0A7I7MUW4,UniRef:UniRef90_A0AA44LKL4
contig_1	Pyrodigal	gene	628928	629935	.	-	.	ID=GCA000153685_00562_gene;locus_tag=GCA000153685_00562;gene=fabH
contig_1	Pyrodigal	CDS	628928	629935	.	-	0	ID=GCA000153685_00562;Name=Mycobacterial beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA000153685_00562;product=Mycobacterial beta-ketoacyl-[acyl-carrier-protein] synthase III;Dbxref=GO:0000062,GO:0004315,GO:0005737,GO:0006633,GO:0008610,GO:0030497,GO:0033818,GO:0035336,GO:0061990;gene=fabH;Parent=GCA000153685_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11608,RefSeq:WP_003402861.1,SO:0001217,UniParc:UPI0000113072,UniRef:UniRef100_P9WNG3,UniRef:UniRef50_P9WNG3,UniRef:UniRef90_P9WNG3;ec_number=2.3.1.301
contig_1	Pyrodigal	gene	630017	630895	.	-	.	ID=GCA000153685_00563_gene;locus_tag=GCA000153685_00563;gene=menA
contig_1	Pyrodigal	CDS	630017	630895	.	-	0	ID=GCA000153685_00563;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA000153685_00563;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;Dbxref=GO:0004659,GO:0005886,GO:0009234,GO:0016020,GO:0032194,GO:0042371,GO:0046428;gene=menA;Parent=GCA000153685_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402865.1,SO:0001217,UniParc:UPI000012EEE3,UniRef:UniRef100_P9WIP3,UniRef:UniRef50_P9WIP3,UniRef:UniRef90_P9WIP3;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	630912	631706	.	+	.	ID=GCA000153685_00564_gene;locus_tag=GCA000153685_00564;gene=mtnP
contig_1	Pyrodigal	CDS	630912	631706	.	+	0	ID=GCA000153685_00564;Name=S-methyl-5'-thioadenosine phosphorylase;locus_tag=GCA000153685_00564;product=S-methyl-5'-thioadenosine phosphorylase;Dbxref=GO:0005829,GO:0006166,GO:0009116,GO:0017061,GO:0019509;gene=mtnP;Parent=GCA000153685_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00772,RefSeq:WP_003402867.1,SO:0001217,UniParc:UPI00000D4F3F,UniRef:UniRef100_O06401,UniRef:UniRef50_O06401,UniRef:UniRef90_O06401;ec_number=2.4.2.28
contig_1	Pyrodigal	gene	631703	632743	.	+	.	ID=GCA000153685_00565_gene;locus_tag=GCA000153685_00565
contig_1	Pyrodigal	CDS	631703	632743	.	+	0	ID=GCA000153685_00565;Name=UDP-glucose 4-epimerase;locus_tag=GCA000153685_00565;product=UDP-glucose 4-epimerase;Parent=GCA000153685_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402868.1,SO:0001217,UniParc:UPI00000D5FF2,UniRef:UniRef100_A5TZR6,UniRef:UniRef50_A0A7K1V9A9,UniRef:UniRef90_A0A655JC20
contig_1	Pyrodigal	gene	632753	634186	.	-	.	ID=GCA000153685_00566_gene;locus_tag=GCA000153685_00566
contig_1	Pyrodigal	CDS	632753	634186	.	-	0	ID=GCA000153685_00566;Name=Integral membrane protein;locus_tag=GCA000153685_00566;product=Integral membrane protein;Parent=GCA000153685_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402870.1,SO:0001217,UniParc:UPI00000D1167,UniRef:UniRef100_A5TZR7,UniRef:UniRef50_A0AA91M2I5,UniRef:UniRef90_A0A8I0ELY9
contig_1	Pyrodigal	gene	634495	636141	.	+	.	ID=GCA000153685_00567_gene;locus_tag=GCA000153685_00567
contig_1	Pyrodigal	CDS	634495	636141	.	+	0	ID=GCA000153685_00567;Name=FHA domain-containing protein;locus_tag=GCA000153685_00567;product=FHA domain-containing protein;Parent=GCA000153685_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900169.1,SO:0001217,UniParc:UPI0000164F88,UniRef:UniRef100_A0A679LCW8,UniRef:UniRef50_A0A1A3C0C5,UniRef:UniRef90_A0A829CHP0
contig_1	Pyrodigal	gene	636174	636830	.	+	.	ID=GCA000153685_00568_gene;locus_tag=GCA000153685_00568
contig_1	Pyrodigal	CDS	636174	636830	.	+	0	ID=GCA000153685_00568;Name=putative glycosyltransferase Rv0539;locus_tag=GCA000153685_00568;product=putative glycosyltransferase Rv0539;Dbxref=GO:0016757;Parent=GCA000153685_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898499.1,SO:0001217,UniParc:UPI0000139A67,UniRef:UniRef100_P9WMY1,UniRef:UniRef50_P9WMY1,UniRef:UniRef90_P9WMY1;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	636827	637489	.	+	.	ID=GCA000153685_00569_gene;locus_tag=GCA000153685_00569
contig_1	Pyrodigal	CDS	636827	637489	.	+	0	ID=GCA000153685_00569;Name=Glycosyltransferase involved in cell wall biogenesis;locus_tag=GCA000153685_00569;product=Glycosyltransferase involved in cell wall biogenesis;Parent=GCA000153685_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09931,RefSeq:WP_003900170.1,SO:0001217,UniParc:UPI00012780FC,UniRef:UniRef100_UPI00012780FC,UniRef:UniRef50_O06406,UniRef:UniRef90_O06406
contig_1	Pyrodigal	gene	637510	638859	.	-	.	ID=GCA000153685_00570_gene;locus_tag=GCA000153685_00570
contig_1	Pyrodigal	CDS	637510	638859	.	-	0	ID=GCA000153685_00570;Name=Conserved integral membrane protein;locus_tag=GCA000153685_00570;product=Conserved integral membrane protein;Parent=GCA000153685_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402890.1,SO:0001217,UniParc:UPI00000C151A,UniRef:UniRef100_A5TZS1,UniRef:UniRef50_A0A4P6Q099,UniRef:UniRef90_A5TZS1
contig_1	Pyrodigal	gene	638871	639959	.	-	.	ID=GCA000153685_00571_gene;locus_tag=GCA000153685_00571;gene=menE
contig_1	Pyrodigal	CDS	638871	639959	.	-	0	ID=GCA000153685_00571;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000153685_00571;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA000153685_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402892.1,SO:0001217,UniParc:UPI00000D0F52,UniRef:UniRef100_A0A679LCF3,UniRef:UniRef50_P9WQ39,UniRef:UniRef90_P9WQ39;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	640028	640330	.	-	.	ID=GCA000153685_00572_gene;locus_tag=GCA000153685_00572
contig_1	Pyrodigal	CDS	640028	640330	.	-	0	ID=GCA000153685_00572;Name=DUF3349 domain-containing protein;locus_tag=GCA000153685_00572;product=DUF3349 domain-containing protein;Parent=GCA000153685_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402896.1,SO:0001217,UniParc:UPI00000C1503,UniRef:UniRef100_O06409,UniRef:UniRef50_A0A100VZ17,UniRef:UniRef90_A0A1X2LZE2
contig_1	Pyrodigal	gene	640390	640668	.	-	.	ID=GCA000153685_00573_gene;locus_tag=GCA000153685_00573
contig_1	Pyrodigal	CDS	640390	640668	.	-	0	ID=GCA000153685_00573;Name=Transmembrane protein;locus_tag=GCA000153685_00573;product=Transmembrane protein;Parent=GCA000153685_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402901.1,SO:0001217,UniParc:UPI00000D1132,UniRef:UniRef100_O06410,UniRef:UniRef50_Q73SN3,UniRef:UniRef90_R4M434
contig_1	Pyrodigal	gene	640665	641918	.	-	.	ID=GCA000153685_00574_gene;locus_tag=GCA000153685_00574;gene=pit
contig_1	Pyrodigal	CDS	640665	641918	.	-	0	ID=GCA000153685_00574;Name=putative low-affinity inorganic phosphate transporter;locus_tag=GCA000153685_00574;product=putative low-affinity inorganic phosphate transporter;Dbxref=GO:0005315,GO:0005886,GO:0015293,GO:0035435;gene=pit;Parent=GCA000153685_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03306,RefSeq:WP_003402904.1,SO:0001217,UniParc:UPI0000164F89,UniRef:UniRef100_P59950,UniRef:UniRef50_P9WIA7,UniRef:UniRef90_P9WIA7
contig_1	Pyrodigal	gene	642038	642424	.	-	.	ID=GCA000153685_00575_gene;locus_tag=GCA000153685_00575
contig_1	Pyrodigal	CDS	642038	642424	.	-	0	ID=GCA000153685_00575;Name=Conserved protein;locus_tag=GCA000153685_00575;product=Conserved protein;Parent=GCA000153685_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402907.1,SO:0001217,UniParc:UPI0000031805,UniRef:UniRef100_O06412,UniRef:UniRef50_A0A2S8BCN8,UniRef:UniRef90_O06412
contig_1	Pyrodigal	gene	642487	643320	.	-	.	ID=GCA000153685_00576_gene;locus_tag=GCA000153685_00576
contig_1	Pyrodigal	CDS	642487	643320	.	-	0	ID=GCA000153685_00576;Name=SDR family oxidoreductase;locus_tag=GCA000153685_00576;product=SDR family oxidoreductase;Dbxref=GO:0006629,GO:0016020,GO:0016491,GO:0033650;Parent=GCA000153685_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE3FC,UniRef:UniRef100_A5TZS7,UniRef:UniRef50_O06413,UniRef:UniRef90_O06413;ec_number=1.2.1.-
contig_1	Pyrodigal	gene	643467	644369	.	-	.	ID=GCA000153685_00577_gene;locus_tag=GCA000153685_00577;gene=menB
contig_1	Pyrodigal	CDS	643467	644369	.	-	0	ID=GCA000153685_00577;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000153685_00577;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005886,GO:0008935,GO:0009234,GO:0034214;gene=menB;Parent=GCA000153685_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,KEGG:K01661,RefSeq:WP_003915439.1,SO:0001217,UniParc:UPI000169A236,UniRef:UniRef100_A0A0E8VBW8,UniRef:UniRef50_P9WNP5,UniRef:UniRef90_P9WNP5;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	644683	645096	.	-	.	ID=GCA000153685_00578_gene;locus_tag=GCA000153685_00578;gene=vapC3
contig_1	Pyrodigal	CDS	644683	645096	.	-	0	ID=GCA000153685_00578;Name=Ribonuclease VapC3;locus_tag=GCA000153685_00578;product=Ribonuclease VapC3;Dbxref=GO:0000287,GO:0004540,GO:0045927,GO:0075136;gene=vapC3;Parent=GCA000153685_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898500.1,SO:0001217,UniParc:UPI00000D0F5D,UniRef:UniRef100_P9WFB7,UniRef:UniRef50_P9WFB7,UniRef:UniRef90_P9WFB7;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	645093	645311	.	-	.	ID=GCA000153685_00579_gene;locus_tag=GCA000153685_00579
contig_1	Pyrodigal	CDS	645093	645311	.	-	0	ID=GCA000153685_00579;Name=Conserved protein of putative function%2C putative antitoxin;locus_tag=GCA000153685_00579;product=Conserved protein of putative function%2C putative antitoxin;Parent=GCA000153685_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898501.1,SO:0001217,UniParc:UPI00005EE3FF,UniRef:UniRef100_A0A654TI94,UniRef:UniRef50_P9WJ59,UniRef:UniRef90_A0A654TI94
contig_1	Pyrodigal	gene	645551	647167	.	-	.	ID=GCA000153685_00580_gene;locus_tag=GCA000153685_00580;gene=fadD8
contig_1	Pyrodigal	CDS	645551	647167	.	-	0	ID=GCA000153685_00580;Name=fatty-acid--CoA ligase FadD8;locus_tag=GCA000153685_00580;product=fatty-acid--CoA ligase FadD8;Dbxref=GO:0004467,GO:0005524,GO:0005886,GO:0031956;gene=fadD8;Parent=GCA000153685_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911239.1,SO:0001217,UniParc:UPI00005EE400,UniRef:UniRef100_O06417,UniRef:UniRef50_O06417,UniRef:UniRef90_O06417;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	647344	648948	.	+	.	ID=GCA000153685_00581_gene;locus_tag=GCA000153685_00581
contig_1	Pyrodigal	CDS	647344	648948	.	+	0	ID=GCA000153685_00581;Name=Amidohydrolase 3 domain-containing protein;locus_tag=GCA000153685_00581;product=Amidohydrolase 3 domain-containing protein;Parent=GCA000153685_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402920.1,SO:0001217,UniParc:UPI0000165235,UniRef:UniRef100_O06418,UniRef:UniRef50_A0A1E3TF30,UniRef:UniRef90_A0A0H3M1V4
contig_1	Pyrodigal	gene	648945	649925	.	+	.	ID=GCA000153685_00582_gene;locus_tag=GCA000153685_00582;gene=menC
contig_1	Pyrodigal	CDS	648945	649925	.	+	0	ID=GCA000153685_00582;Name=o-succinylbenzoate synthase;locus_tag=GCA000153685_00582;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0043748;gene=menC;Parent=GCA000153685_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02549,RefSeq:WP_003402923.1,SO:0001217,UniParc:UPI000012EEEB,UniRef:UniRef100_P9WJP3,UniRef:UniRef50_P9WJP3,UniRef:UniRef90_P9WJP3;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	649922	650710	.	+	.	ID=GCA000153685_00583_gene;locus_tag=GCA000153685_00583;gene=bpoC
contig_1	Pyrodigal	CDS	649922	650710	.	+	0	ID=GCA000153685_00583;Name=Putative non-heme bromoperoxidase BpoC;locus_tag=GCA000153685_00583;product=Putative non-heme bromoperoxidase BpoC;Dbxref=GO:0016020,GO:0019806;gene=bpoC;Parent=GCA000153685_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402925.1,SO:0001217,UniParc:UPI00000D5E6A,UniRef:UniRef100_P9WNH1,UniRef:UniRef50_P9WNH1,UniRef:UniRef90_P9WNH1
contig_1	Pyrodigal	gene	650753	652417	.	+	.	ID=GCA000153685_00584_gene;locus_tag=GCA000153685_00584;gene=menD
contig_1	Pyrodigal	CDS	650753	652417	.	+	0	ID=GCA000153685_00584;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000153685_00584;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000153685_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02551,RefSeq:WP_003402927.1,SO:0001217,UniParc:UPI00000CCB10,UniRef:UniRef100_P9WK11,UniRef:UniRef50_P9WK11,UniRef:UniRef90_P9WK11;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	652414	652929	.	+	.	ID=GCA000153685_00585_gene;locus_tag=GCA000153685_00585
contig_1	Pyrodigal	CDS	652414	652929	.	+	0	ID=GCA000153685_00585;Name=Transmembrane protein;locus_tag=GCA000153685_00585;product=Transmembrane protein;Parent=GCA000153685_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402929.1,SO:0001217,UniParc:UPI0000164F8B,UniRef:UniRef100_A0A0H3L9V0,UniRef:UniRef50_G8RTZ1,UniRef:UniRef90_A0A8I0JY61
contig_1	Pyrodigal	gene	652901	654127	.	+	.	ID=GCA000153685_00586_gene;locus_tag=GCA000153685_00586;gene=mgtA
contig_1	Pyrodigal	CDS	652901	654127	.	+	0	ID=GCA000153685_00586;Name=GDP-mannose-dependent alpha-mannosyltransferase;locus_tag=GCA000153685_00586;product=GDP-mannose-dependent alpha-mannosyltransferase;Dbxref=GO:0000030,GO:0008654,GO:0009247,GO:0016020,GO:0016758,GO:0046488;gene=mgtA;Parent=GCA000153685_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912598,KEGG:K12583,SO:0001217,UniParc:UPI0003F5D563,UniRef:UniRef100_A0A0E9AF88,UniRef:UniRef50_P9WMY5,UniRef:UniRef90_P9WMY5;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	654144	654848	.	+	.	ID=GCA000153685_00587_gene;locus_tag=GCA000153685_00587;gene=menG
contig_1	Pyrodigal	CDS	654144	654848	.	+	0	ID=GCA000153685_00587;Name=demethylmenaquinone methyltransferase;locus_tag=GCA000153685_00587;product=demethylmenaquinone methyltransferase;Dbxref=GO:0005886,GO:0008168,GO:0009234,GO:0032259,GO:0043770;gene=menG;Parent=GCA000153685_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_003402936.1,SO:0001217,UniParc:UPI00000D4F40,UniRef:UniRef100_P9WFR3,UniRef:UniRef50_P9WFR3,UniRef:UniRef90_P9WFR3;ec_number=2.1.1.163
contig_1	Pyrodigal	gene	654862	655200	.	-	.	ID=GCA000153685_00588_gene;locus_tag=GCA000153685_00588
contig_1	Pyrodigal	CDS	654862	655200	.	-	0	ID=GCA000153685_00588;Name=putative protein MT0585;locus_tag=GCA000153685_00588;product=putative protein MT0585;Dbxref=GO:0005576,GO:0009274;Parent=GCA000153685_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402937.1,SO:0001217,UniParc:UPI00000D10A7,UniRef:UniRef100_P9WKL3,UniRef:UniRef50_P9WKL3,UniRef:UniRef90_P9WKL3
contig_1	Pyrodigal	gene	655234	655959	.	-	.	ID=GCA000153685_00589_gene;locus_tag=GCA000153685_00589;gene=htm
contig_1	Pyrodigal	CDS	655234	655959	.	-	0	ID=GCA000153685_00589;Name=benzoquinone methyltransferase;locus_tag=GCA000153685_00589;product=benzoquinone methyltransferase;Dbxref=GO:0001666,GO:0005829,GO:0008168,GO:0009751,GO:0010106,GO:0032259;gene=htm;Parent=GCA000153685_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911240,RefSeq:WP_003402938.1,SO:0001217,UniParc:UPI00000D0FA9,UniRef:UniRef100_P9WKL5,UniRef:UniRef50_P9WKL5,UniRef:UniRef90_P9WKL5;ec_number=2.1.1.374
contig_1	Pyrodigal	gene	655984	657210	.	-	.	ID=GCA000153685_00590_gene;locus_tag=GCA000153685_00590;gene=menJ
contig_1	Pyrodigal	CDS	655984	657210	.	-	0	ID=GCA000153685_00590;Name=menaquinone reductase;locus_tag=GCA000153685_00590;product=menaquinone reductase;Dbxref=GO:0009234,GO:0009274,GO:0016627,GO:0016628,GO:0071949;gene=menJ;Parent=GCA000153685_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21401,RefSeq:WP_003402939.1,SO:0001217,UniParc:UPI00000D5FA5,UniRef:UniRef100_P9WNY9,UniRef:UniRef50_P9WNY9,UniRef:UniRef90_P9WNY9;ec_number=1.3.99.38
contig_1	Pyrodigal	gene	657244	658233	.	+	.	ID=GCA000153685_00591_gene;locus_tag=GCA000153685_00591;gene=grcC
contig_1	Pyrodigal	CDS	657244	658233	.	+	0	ID=GCA000153685_00591;Name=polyprenyl-diphosphate synthase GrcC;locus_tag=GCA000153685_00591;product=polyprenyl-diphosphate synthase GrcC;Dbxref=GO:0004311,GO:0004337,GO:0004659,GO:0005886,GO:0008299,GO:0009274,GO:0033384,GO:0033386,GO:0046872,GO:0052924;gene=grcC;Parent=GCA000153685_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402957,BlastRules:WP_010886102,SO:0001217,UniParc:UPI000252D2E5,UniRef:UniRef100_A0A0H3L6H0,UniRef:UniRef50_O06428,UniRef:UniRef90_O06428;ec_number=2.5.1.85
contig_1	Pyrodigal	gene	658334	659194	.	+	.	ID=GCA000153685_00592_gene;locus_tag=GCA000153685_00592;gene=htpX
contig_1	Pyrodigal	CDS	658334	659194	.	+	0	ID=GCA000153685_00592;Name=zinc metalloprotease HtpX;locus_tag=GCA000153685_00592;product=zinc metalloprotease HtpX;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0008270;gene=htpX;Parent=GCA000153685_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0501,COG:O,RefSeq:WP_003402959.1,SO:0001217,UniParc:UPI000012CE03,UniRef:UniRef100_P9WHS5,UniRef:UniRef50_P9WHS5,UniRef:UniRef90_P9WHS5;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	659379	660434	.	-	.	ID=GCA000153685_00593_gene;locus_tag=GCA000153685_00593;gene=gpsA
contig_1	Pyrodigal	CDS	659379	660434	.	-	0	ID=GCA000153685_00593;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000153685_00593;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006650,GO:0008654,GO:0046167,GO:0046168,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000153685_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,SO:0001217,UniParc:UPI0001545682,UniRef:UniRef100_P9WN75,UniRef:UniRef50_P9WN75,UniRef:UniRef90_P9WN75;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	660465	661925	.	-	.	ID=GCA000153685_00594_gene;locus_tag=GCA000153685_00594
contig_1	Pyrodigal	CDS	660465	661925	.	-	0	ID=GCA000153685_00594;Name=Monooxygenase;locus_tag=GCA000153685_00594;product=Monooxygenase;Parent=GCA000153685_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10215,RefSeq:WP_003898504.1,SO:0001217,UniParc:UPI0000164F8D,UniRef:UniRef100_A0A0H3L5Y2,UniRef:UniRef50_A0A498QMH8,UniRef:UniRef90_A0A0U0R5C0;ec_number=1.14.13.-
contig_1	Pyrodigal	gene	662003	662494	.	-	.	ID=GCA000153685_00595_gene;locus_tag=GCA000153685_00595;gene=yajQ
contig_1	Pyrodigal	CDS	662003	662494	.	-	0	ID=GCA000153685_00595;Name=YajQ family cyclic di-GMP-binding protein;locus_tag=GCA000153685_00595;product=YajQ family cyclic di-GMP-binding protein;Dbxref=GO:0000166,GO:0005829;gene=yajQ;Parent=GCA000153685_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1666,COG:T,KEGG:K09767,RefSeq:WP_003402987.1,SO:0001217,UniParc:UPI00000D0F58,UniRef:UniRef100_P9WFK9,UniRef:UniRef50_P9WFK9,UniRef:UniRef90_P9WFK9
contig_1	tRNAscan-SE	gene	662564	662647	.	+	.	ID=GCA000153685_00596_gene;locus_tag=GCA000153685_00596;gene=trnY
contig_1	tRNAscan-SE	tRNA	662564	662647	.	+	.	ID=GCA000153685_00596;Name=tRNA-Tyr(gta);locus_tag=GCA000153685_00596;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000153685_00596_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	Pyrodigal	gene	662773	663795	.	+	.	ID=GCA000153685_00597_gene;locus_tag=GCA000153685_00597
contig_1	Pyrodigal	CDS	662773	663795	.	+	0	ID=GCA000153685_00597;Name=Tetracenpmycin polyketide synthesis 8-o-methyltransferase;locus_tag=GCA000153685_00597;product=Tetracenpmycin polyketide synthesis 8-o-methyltransferase;Parent=GCA000153685_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FC6,UniRef:UniRef100_Q7D9M4,UniRef:UniRef50_A0A5S9R628,UniRef:UniRef90_Q7D9M4
contig_1	Pyrodigal	gene	663923	665323	.	+	.	ID=GCA000153685_00598_gene;locus_tag=GCA000153685_00598;gene=cyp135B1
contig_1	Pyrodigal	CDS	663923	665323	.	+	0	ID=GCA000153685_00598;Name=Putative cytochrome P450 135B1;locus_tag=GCA000153685_00598;product=Putative cytochrome P450 135B1;Dbxref=GO:0004497,GO:0005506,GO:0005829,GO:0016491,GO:0016705,GO:0020037;gene=cyp135B1;Parent=GCA000153685_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A289,UniRef:UniRef100_P9WPM9,UniRef:UniRef50_P9WPM9,UniRef:UniRef90_P9WPM9;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	665458	665724	.	+	.	ID=GCA000153685_00599_gene;locus_tag=GCA000153685_00599
contig_1	Pyrodigal	CDS	665458	665724	.	+	0	ID=GCA000153685_00599;Name=putative protein Rv0569;locus_tag=GCA000153685_00599;product=putative protein Rv0569;Dbxref=GO:0001666,GO:0005829,GO:0009274;Parent=GCA000153685_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003402995.1,SO:0001217,UniParc:UPI0000043EB4,UniRef:UniRef100_P9WM83,UniRef:UniRef50_P9WM83,UniRef:UniRef90_P9WM83
contig_1	Pyrodigal	gene	665798	667828	.	+	.	ID=GCA000153685_00600_gene;locus_tag=GCA000153685_00600;gene=nrdZ
contig_1	Pyrodigal	CDS	665798	667828	.	+	0	ID=GCA000153685_00600;Name=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;locus_tag=GCA000153685_00600;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;Dbxref=GO:0000166,GO:0004748,GO:0005524,GO:0009263,GO:0031419,GO:0071897;gene=nrdZ;Parent=GCA000153685_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003156E18,UniRef:UniRef100_A0A0E8VAF1,UniRef:UniRef50_P9WH77,UniRef:UniRef90_P9WH76;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	667942	669273	.	-	.	ID=GCA000153685_00601_gene;locus_tag=GCA000153685_00601
contig_1	Pyrodigal	CDS	667942	669273	.	-	0	ID=GCA000153685_00601;Name=Putative phosphoribosyl transferase Rv0571c;locus_tag=GCA000153685_00601;product=Putative phosphoribosyl transferase Rv0571c;Dbxref=GO:0005829,GO:0009274,GO:0016740,GO:0016787;Parent=GCA000153685_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403001.1,SO:0001217,UniParc:UPI0000165237,UniRef:UniRef100_P9WHK1,UniRef:UniRef50_P9WHK1,UniRef:UniRef90_P9WHK1
contig_1	Pyrodigal	gene	669378	669500	.	-	.	ID=GCA000153685_00602_gene;locus_tag=GCA000153685_00602
contig_1	Pyrodigal	CDS	669378	669500	.	-	0	ID=GCA000153685_00602;Name=hypothetical protein;locus_tag=GCA000153685_00602;product=hypothetical protein;Parent=GCA000153685_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B7C,UniRef:UniRef100_A0A0H3L6I5,UniRef:UniRef50_A0A0H3L6I5,UniRef:UniRef90_A0A0H3L6I5
contig_1	Pyrodigal	gene	669497	669838	.	-	.	ID=GCA000153685_00603_gene;locus_tag=GCA000153685_00603
contig_1	Pyrodigal	CDS	669497	669838	.	-	0	ID=GCA000153685_00603;Name=putative protein Rv0572c;locus_tag=GCA000153685_00603;product=putative protein Rv0572c;Parent=GCA000153685_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898507.1,SO:0001217,UniParc:UPI0000164F8E,UniRef:UniRef100_P9WM80,UniRef:UniRef50_P9WM81,UniRef:UniRef90_P9WM81
contig_1	Pyrodigal	gene	670306	671697	.	-	.	ID=GCA000153685_00604_gene;locus_tag=GCA000153685_00604;gene=pncB2
contig_1	Pyrodigal	CDS	670306	671697	.	-	0	ID=GCA000153685_00604;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000153685_00604;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004516,GO:0005829,GO:0016740,GO:0034355;gene=pncB2;Parent=GCA000153685_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403007.1,SO:0001217,UniParc:UPI00000D5F79,UniRef:UniRef100_P9WJI7,UniRef:UniRef50_P9WJI7,UniRef:UniRef90_P9WJI7;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	671707	672849	.	-	.	ID=GCA000153685_00605_gene;locus_tag=GCA000153685_00605
contig_1	Pyrodigal	CDS	671707	672849	.	-	0	ID=GCA000153685_00605;Name=putative polyglutamine synthesis accessory protein Rv0574c;locus_tag=GCA000153685_00605;product=putative polyglutamine synthesis accessory protein Rv0574c;Parent=GCA000153685_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403008.1,SO:0001217,UniParc:UPI00000D5ED6,UniRef:UniRef100_P9WM79,UniRef:UniRef50_P9WM79,UniRef:UniRef90_P9WM79
contig_1	Pyrodigal	gene	673034	674200	.	-	.	ID=GCA000153685_00606_gene;locus_tag=GCA000153685_00606
contig_1	Pyrodigal	CDS	673034	674200	.	-	0	ID=GCA000153685_00606;Name=FAD-binding domain;locus_tag=GCA000153685_00606;product=FAD-binding domain;Parent=GCA000153685_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898508.1,SO:0001217,UniParc:UPI00000D5FBE,UniRef:UniRef100_O53772,UniRef:UniRef50_R4M5I3,UniRef:UniRef90_A0A0H3L6I9
contig_1	Pyrodigal	gene	674303	675607	.	+	.	ID=GCA000153685_00607_gene;locus_tag=GCA000153685_00607;gene=arsR
contig_1	Pyrodigal	CDS	674303	675607	.	+	0	ID=GCA000153685_00607;Name=Transcriptional regulator%2C ArsR family;locus_tag=GCA000153685_00607;product=Transcriptional regulator%2C ArsR family;gene=arsR;Parent=GCA000153685_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900174.1,SO:0001217,UniParc:UPI0000165238,UniRef:UniRef100_Q7D9L7,UniRef:UniRef50_A0A7I7LBD6,UniRef:UniRef90_Q7D9L7
contig_1	Pyrodigal	gene	675621	676406	.	+	.	ID=GCA000153685_00608_gene;locus_tag=GCA000153685_00608;gene=cfp32
contig_1	Pyrodigal	CDS	675621	676406	.	+	0	ID=GCA000153685_00608;Name=Putative glyoxylase CFP32;locus_tag=GCA000153685_00608;product=Putative glyoxylase CFP32;Dbxref=GO:0005576,GO:0005886;gene=cfp32;Parent=GCA000153685_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403012.1,SO:0001217,UniParc:UPI000004A4B2,UniRef:UniRef100_P9WIR3,UniRef:UniRef50_P9WIR3,UniRef:UniRef90_P9WIR3
contig_1	Pyrodigal	gene	676451	680371	.	-	.	ID=GCA000153685_00609_gene;locus_tag=GCA000153685_00609
contig_1	Pyrodigal	CDS	676451	680371	.	-	0	ID=GCA000153685_00609;Name=PE domain-containing protein;locus_tag=GCA000153685_00609;product=PE domain-containing protein;Parent=GCA000153685_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886080.1,SO:0001217,UniParc:UPI00000D4FC8,UniRef:UniRef100_Q6MX28,UniRef:UniRef50_R4M2X8,UniRef:UniRef90_R4M2X8
contig_1	Pyrodigal	gene	680693	681451	.	+	.	ID=GCA000153685_00610_gene;locus_tag=GCA000153685_00610;gene=pilT
contig_1	Pyrodigal	CDS	680693	681451	.	+	0	ID=GCA000153685_00610;Name=Twitching motility protein PilT;locus_tag=GCA000153685_00610;product=Twitching motility protein PilT;gene=pilT;Parent=GCA000153685_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09122,RefSeq:WP_003898511.1,SO:0001217,UniParc:UPI00000CCB96,UniRef:UniRef100_O53776,UniRef:UniRef50_O53776,UniRef:UniRef90_O53776
contig_1	Pyrodigal	gene	681580	682146	.	-	.	ID=GCA000153685_00611_gene;locus_tag=GCA000153685_00611
contig_1	Pyrodigal	CDS	681580	682146	.	-	0	ID=GCA000153685_00611;Name=Conserved protein;locus_tag=GCA000153685_00611;product=Conserved protein;Parent=GCA000153685_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001278166,UniRef:UniRef100_A0A0H3L603,UniRef:UniRef50_A0A1A1WSZ2,UniRef:UniRef90_O53777
contig_1	Pyrodigal	gene	682170	682385	.	+	.	ID=GCA000153685_00612_gene;locus_tag=GCA000153685_00612;gene=vapB26
contig_1	Pyrodigal	CDS	682170	682385	.	+	0	ID=GCA000153685_00612;Name=type II toxin-antitoxin system antitoxin VapB26;locus_tag=GCA000153685_00612;product=type II toxin-antitoxin system antitoxin VapB26;Dbxref=GO:0006355,GO:0045927;gene=vapB26;Parent=GCA000153685_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403039,RefSeq:WP_003403039.1,SO:0001217,UniParc:UPI00000C154F,UniRef:UniRef100_O53778,UniRef:UniRef50_O53778,UniRef:UniRef90_O53778
contig_1	Pyrodigal	gene	682382	682789	.	+	.	ID=GCA000153685_00613_gene;locus_tag=GCA000153685_00613;gene=vapC26
contig_1	Pyrodigal	CDS	682382	682789	.	+	0	ID=GCA000153685_00613;Name=type II toxin-antitoxin system toxin ribonuclease C26;locus_tag=GCA000153685_00613;product=type II toxin-antitoxin system toxin ribonuclease C26;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC26;Parent=GCA000153685_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403047,RefSeq:WP_003403047.1,SO:0001217,UniParc:UPI00000C1550,UniRef:UniRef100_O53779,UniRef:UniRef50_O53779,UniRef:UniRef90_O53779;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	682849	683535	.	-	.	ID=GCA000153685_00614_gene;locus_tag=GCA000153685_00614;gene=lpqN
contig_1	Pyrodigal	CDS	682849	683535	.	-	0	ID=GCA000153685_00614;Name=Lipoprotein LpqN;locus_tag=GCA000153685_00614;product=Lipoprotein LpqN;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0071555;gene=lpqN;Parent=GCA000153685_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403052.1,SO:0001217,UniParc:UPI00000D5E52,UniRef:UniRef100_O53780,UniRef:UniRef50_O53780,UniRef:UniRef90_O53780
contig_1	Pyrodigal	gene	683689	686322	.	+	.	ID=GCA000153685_00615_gene;locus_tag=GCA000153685_00615
contig_1	Pyrodigal	CDS	683689	686322	.	+	0	ID=GCA000153685_00615;Name=putative glycosidase Rv0584;locus_tag=GCA000153685_00615;product=putative glycosidase Rv0584;Dbxref=GO:0000224,GO:0005829,GO:0005975,GO:0006516,GO:0016798,GO:0030246;Parent=GCA000153685_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403055.1,SO:0001217,UniParc:UPI00000CCBC5,UniRef:UniRef100_O86365,UniRef:UniRef50_O86365,UniRef:UniRef90_O86365;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	686345	688732	.	-	.	ID=GCA000153685_00616_gene;locus_tag=GCA000153685_00616
contig_1	Pyrodigal	CDS	686345	688732	.	-	0	ID=GCA000153685_00616;Name=TIGR00374 family protein;locus_tag=GCA000153685_00616;product=TIGR00374 family protein;Parent=GCA000153685_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900178.1,SO:0001217,UniParc:UPI00000C1563,UniRef:UniRef100_A5TZW5,UniRef:UniRef50_Q5YN06,UniRef:UniRef90_A0A1X2LZ94
contig_1	Pyrodigal	gene	688870	689592	.	+	.	ID=GCA000153685_00617_gene;locus_tag=GCA000153685_00617;gene=mce2R
contig_1	Pyrodigal	CDS	688870	689592	.	+	0	ID=GCA000153685_00617;Name=FadR family transcriptional regulator Mce2R;locus_tag=GCA000153685_00617;product=FadR family transcriptional regulator Mce2R;Dbxref=GO:0003677,GO:0003700;gene=mce2R;Parent=GCA000153685_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403065,RefSeq:WP_003403065.1,SO:0001217,UniParc:UPI000004B70D,UniRef:UniRef100_P9WMG5,UniRef:UniRef50_P9WMG5,UniRef:UniRef90_P9WMG5
contig_1	Pyrodigal	gene	689589	690386	.	+	.	ID=GCA000153685_00618_gene;locus_tag=GCA000153685_00618;gene=mlaE
contig_1	Pyrodigal	CDS	689589	690386	.	+	0	ID=GCA000153685_00618;Name=ABC transporter permease;locus_tag=GCA000153685_00618;product=ABC transporter permease;gene=mlaE;Parent=GCA000153685_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_003403095.1,SO:0001217,UniParc:UPI000004B70E,UniRef:UniRef100_A0A0H3L9Y9,UniRef:UniRef50_O07412,UniRef:UniRef90_A0A7I9YIF7
contig_1	Pyrodigal	gene	690388	691275	.	+	.	ID=GCA000153685_00619_gene;locus_tag=GCA000153685_00619;gene=mlaE
contig_1	Pyrodigal	CDS	690388	691275	.	+	0	ID=GCA000153685_00619;Name=ABC transporter permease;locus_tag=GCA000153685_00619;product=ABC transporter permease;gene=mlaE;Parent=GCA000153685_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_003898514.1,SO:0001217,UniParc:UPI0000164F93,UniRef:UniRef100_Q7D9L0,UniRef:UniRef50_L0T2Q9,UniRef:UniRef90_A0A045IPJ6
contig_1	Pyrodigal	gene	691281	692495	.	+	.	ID=GCA000153685_00620_gene;locus_tag=GCA000153685_00620
contig_1	Pyrodigal	CDS	691281	692495	.	+	0	ID=GCA000153685_00620;Name=Mce-family protein Mce2A;locus_tag=GCA000153685_00620;product=Mce-family protein Mce2A;Parent=GCA000153685_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403104.1,SO:0001217,UniParc:UPI0000164F94,UniRef:UniRef100_A0A0H3LCP4,UniRef:UniRef50_Q79FY7,UniRef:UniRef90_Q79FY7
contig_1	Pyrodigal	gene	692492	693319	.	+	.	ID=GCA000153685_00621_gene;locus_tag=GCA000153685_00621
contig_1	Pyrodigal	CDS	692492	693319	.	+	0	ID=GCA000153685_00621;Name=Mce-family protein Mce2B;locus_tag=GCA000153685_00621;product=Mce-family protein Mce2B;Parent=GCA000153685_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000004B711,UniRef:UniRef100_O07788,UniRef:UniRef50_O07414,UniRef:UniRef90_O07788
contig_1	Pyrodigal	gene	693268	693522	.	+	.	ID=GCA000153685_00622_gene;locus_tag=GCA000153685_00622
contig_1	Pyrodigal	CDS	693268	693522	.	+	0	ID=GCA000153685_00622;Name=Mce-family related protein;locus_tag=GCA000153685_00622;product=Mce-family related protein;Parent=GCA000153685_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B84,UniRef:UniRef100_I6X9D2,UniRef:UniRef50_I6X9D2,UniRef:UniRef90_I6X9D2
contig_1	Pyrodigal	gene	693519	694964	.	+	.	ID=GCA000153685_00623_gene;locus_tag=GCA000153685_00623
contig_1	Pyrodigal	CDS	693519	694964	.	+	0	ID=GCA000153685_00623;Name=Mce-family protein Mce2C;locus_tag=GCA000153685_00623;product=Mce-family protein Mce2C;Parent=GCA000153685_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900181.1,SO:0001217,UniParc:UPI000004B712,UniRef:UniRef100_O07787,UniRef:UniRef50_O07787,UniRef:UniRef90_O07787
contig_1	Pyrodigal	gene	694961	696397	.	+	.	ID=GCA000153685_00624_gene;locus_tag=GCA000153685_00624
contig_1	Pyrodigal	CDS	694961	696397	.	+	0	ID=GCA000153685_00624;Name=Mce-family protein Mce2D;locus_tag=GCA000153685_00624;product=Mce-family protein Mce2D;Parent=GCA000153685_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A8EFF,UniRef:UniRef100_A0A679LBG4,UniRef:UniRef50_O07416,UniRef:UniRef90_I6WYT7
contig_1	Pyrodigal	gene	696497	697693	.	+	.	ID=GCA000153685_00625_gene;locus_tag=GCA000153685_00625;gene=lprL
contig_1	Pyrodigal	CDS	696497	697693	.	+	0	ID=GCA000153685_00625;Name=putative Mce-family lipoprotein LprL (Mce-family lipoprotein Mce2E);locus_tag=GCA000153685_00625;product=putative Mce-family lipoprotein LprL (Mce-family lipoprotein Mce2E);gene=lprL;Parent=GCA000153685_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003FA9984,UniRef:UniRef100_A0A0E8UQK9,UniRef:UniRef50_O07417,UniRef:UniRef90_I6Y461
contig_1	Pyrodigal	gene	697698	699248	.	+	.	ID=GCA000153685_00626_gene;locus_tag=GCA000153685_00626
contig_1	Pyrodigal	CDS	697698	699248	.	+	0	ID=GCA000153685_00626;Name=Mce-family protein Mce2F;locus_tag=GCA000153685_00626;product=Mce-family protein Mce2F;Parent=GCA000153685_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403119.1,SO:0001217,UniParc:UPI000004B715,UniRef:UniRef100_O07784,UniRef:UniRef50_L0T2W6,UniRef:UniRef90_O07784
contig_1	Pyrodigal	gene	699300	699695	.	-	.	ID=GCA000153685_00627_gene;locus_tag=GCA000153685_00627;gene=vapC4
contig_1	Pyrodigal	CDS	699300	699695	.	-	0	ID=GCA000153685_00627;Name=type II toxin-antitoxin system toxin ribonuclease C4;locus_tag=GCA000153685_00627;product=type II toxin-antitoxin system toxin ribonuclease C4;Dbxref=GO:0000287,GO:0003723,GO:0004540,GO:0005576,GO:0044003,GO:0097351;gene=vapC4;Parent=GCA000153685_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403122,SO:0001217,UniParc:UPI00000CCB3C,UniRef:UniRef100_A0A0H3L612,UniRef:UniRef50_O07783,UniRef:UniRef90_O07783;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	699689	699946	.	-	.	ID=GCA000153685_00628_gene;locus_tag=GCA000153685_00628;gene=vapB4
contig_1	Pyrodigal	CDS	699689	699946	.	-	0	ID=GCA000153685_00628;Name=type II toxin-antitoxin system antitoxin VapB4;locus_tag=GCA000153685_00628;product=type II toxin-antitoxin system antitoxin VapB4;Dbxref=GO:0097351,GO:0098754;gene=vapB4;Parent=GCA000153685_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403125,RefSeq:WP_003403125.1,SO:0001217,UniParc:UPI00000D0FAC,UniRef:UniRef100_P9WF21,UniRef:UniRef50_P9WF21,UniRef:UniRef90_P9WF21
contig_1	Pyrodigal	gene	700129	701364	.	-	.	ID=GCA000153685_00629_gene;locus_tag=GCA000153685_00629
contig_1	Pyrodigal	CDS	700129	701364	.	-	0	ID=GCA000153685_00629;Name=ATP-binding protein;locus_tag=GCA000153685_00629;product=ATP-binding protein;Parent=GCA000153685_00629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07133,RefSeq:WP_003403128.1,SO:0001217,UniParc:UPI00000D0FBD,UniRef:UniRef100_I6WYU2,UniRef:UniRef50_I6WYU2,UniRef:UniRef90_I6WYU2
contig_1	Pyrodigal	gene	701481	701654	.	+	.	ID=GCA000153685_00630_gene;locus_tag=GCA000153685_00630
contig_1	Pyrodigal	CDS	701481	701654	.	+	0	ID=GCA000153685_00630;Name=hypothetical protein;locus_tag=GCA000153685_00630;product=hypothetical protein;Parent=GCA000153685_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403133.1,SO:0001217,UniParc:UPI00005EE40F,UniRef:UniRef100_A0A0H3LCP6,UniRef:UniRef50_A0A0H3LCP6,UniRef:UniRef90_A0A0H3LCP6
contig_1	Pyrodigal	gene	701615	702028	.	-	.	ID=GCA000153685_00631_gene;locus_tag=GCA000153685_00631;gene=vapC27
contig_1	Pyrodigal	CDS	701615	702028	.	-	0	ID=GCA000153685_00631;Name=Ribonuclease VapC27;locus_tag=GCA000153685_00631;product=Ribonuclease VapC27;Dbxref=GO:0000287,GO:0004540,GO:0005576;gene=vapC27;Parent=GCA000153685_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403137.1,SO:0001217,UniParc:UPI00000D0F50,UniRef:UniRef100_P9WF83,UniRef:UniRef50_P9WF83,UniRef:UniRef90_P9WF83;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	702025	702261	.	-	.	ID=GCA000153685_00632_gene;locus_tag=GCA000153685_00632;gene=vapB27
contig_1	Pyrodigal	CDS	702025	702261	.	-	0	ID=GCA000153685_00632;Name=Antitoxin VapB27;locus_tag=GCA000153685_00632;product=Antitoxin VapB27;Dbxref=GO:0003677;gene=vapB27;Parent=GCA000153685_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403139.1,SO:0001217,UniParc:UPI000016523B,UniRef:UniRef100_O07779,UniRef:UniRef50_O07779,UniRef:UniRef90_O07779
contig_1	Pyrodigal	gene	702365	702871	.	-	.	ID=GCA000153685_00633_gene;locus_tag=GCA000153685_00633
contig_1	Pyrodigal	CDS	702365	702871	.	-	0	ID=GCA000153685_00633;Name=two component system sensor kinase HK1;locus_tag=GCA000153685_00633;product=two component system sensor kinase HK1;Dbxref=GO:0000155,GO:0000156,GO:0004672,GO:0005524,GO:0070298;Parent=GCA000153685_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900973,RefSeq:WP_003900973.1,SO:0001217,UniParc:UPI00001A8F01,UniRef:UniRef100_O07778,UniRef:UniRef50_O07778,UniRef:UniRef90_O07778;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	702985	703515	.	-	.	ID=GCA000153685_00634_gene;locus_tag=GCA000153685_00634
contig_1	Pyrodigal	CDS	702985	703515	.	-	0	ID=GCA000153685_00634;Name=two component system sensor kinase HK2;locus_tag=GCA000153685_00634;product=two component system sensor kinase HK2;Parent=GCA000153685_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917320,RefSeq:WP_003917320.1,SO:0001217,UniParc:UPI00005EE410,UniRef:UniRef100_A0A0H3L6L5,UniRef:UniRef50_A0A0H3L6L5,UniRef:UniRef90_A0A0H3L6L5
contig_1	Pyrodigal	gene	703499	704194	.	-	.	ID=GCA000153685_00635_gene;locus_tag=GCA000153685_00635;gene=tcrA
contig_1	Pyrodigal	CDS	703499	704194	.	-	0	ID=GCA000153685_00635;Name=two-component system response regulator TcrA;locus_tag=GCA000153685_00635;product=two-component system response regulator TcrA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=tcrA;Parent=GCA000153685_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_014585072,RefSeq:WP_003918099.1,SO:0001217,UniParc:UPI00021789A3,UniRef:UniRef100_A0A0E8V1X9,UniRef:UniRef50_O07776,UniRef:UniRef90_O07776
contig_1	Pyrodigal	gene	704317	704628	.	+	.	ID=GCA000153685_00636_gene;locus_tag=GCA000153685_00636
contig_1	Pyrodigal	CDS	704317	704628	.	+	0	ID=GCA000153685_00636;Name=PepSY domain-containing protein;locus_tag=GCA000153685_00636;product=PepSY domain-containing protein;Parent=GCA000153685_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403164.1,SO:0001217,UniParc:UPI00000C14E7,UniRef:UniRef100_O07775,UniRef:UniRef50_R4M351,UniRef:UniRef90_R4M351
contig_1	Pyrodigal	gene	704724	705650	.	+	.	ID=GCA000153685_00637_gene;locus_tag=GCA000153685_00637;gene=lpqO
contig_1	Pyrodigal	CDS	704724	705650	.	+	0	ID=GCA000153685_00637;Name=Conserved lipoprotein LpqO;locus_tag=GCA000153685_00637;product=Conserved lipoprotein LpqO;gene=lpqO;Parent=GCA000153685_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE412,UniRef:UniRef100_A5TZY5,UniRef:UniRef50_A0A653EZM9,UniRef:UniRef90_A5TZY5
contig_1	Pyrodigal	gene	705891	706475	.	+	.	ID=GCA000153685_00638_gene;locus_tag=GCA000153685_00638;gene=tnp
contig_1	Pyrodigal	CDS	705891	706475	.	+	0	ID=GCA000153685_00638;Name=IS607 family IS1536 transposase;locus_tag=GCA000153685_00638;product=IS607 family IS1536 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1536,RefSeq:WP_003403171.1,SO:0001217,UniParc:UPI00005EE413,UniRef:UniRef100_I6Y890,UniRef:UniRef50_A0A498PR97,UniRef:UniRef90_I6Y890
contig_1	Pyrodigal	gene	706477	707220	.	+	.	ID=GCA000153685_00639_gene;locus_tag=GCA000153685_00639
contig_1	Pyrodigal	CDS	706477	707220	.	+	0	ID=GCA000153685_00639;Name=putative transposase;locus_tag=GCA000153685_00639;product=putative transposase;Parent=GCA000153685_00639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D3ACC,UniRef:UniRef100_O07772,UniRef:UniRef50_A0A952EUZ1,UniRef:UniRef90_O07772
contig_1	Pyrodigal	gene	707190	707660	.	+	.	ID=GCA000153685_00640_gene;locus_tag=GCA000153685_00640;gene=cdiI
contig_1	Pyrodigal	CDS	707190	707660	.	+	0	ID=GCA000153685_00640;Name=CdiI immunity protein domain-containing protein;locus_tag=GCA000153685_00640;product=CdiI immunity protein domain-containing protein;gene=cdiI;Parent=GCA000153685_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898523.1,SO:0001217,UniParc:UPI00005EE414,UniRef:UniRef100_A0A0H3LCQ2,UniRef:UniRef50_R4MAE0,UniRef:UniRef90_R4MAE0
contig_1	Pyrodigal	gene	707705	707950	.	+	.	ID=GCA000153685_00641_gene;locus_tag=GCA000153685_00641;gene=vapB28
contig_1	Pyrodigal	CDS	707705	707950	.	+	0	ID=GCA000153685_00641;Name=Antitoxin VapB28;locus_tag=GCA000153685_00641;product=Antitoxin VapB28;Dbxref=GO:0045927;gene=vapB28;Parent=GCA000153685_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403184.1,SO:0001217,UniParc:UPI00000D1014,UniRef:UniRef100_P9WJ39,UniRef:UniRef50_P9WJ39,UniRef:UniRef90_P9WJ39
contig_1	Pyrodigal	gene	707947	708348	.	+	.	ID=GCA000153685_00642_gene;locus_tag=GCA000153685_00642;gene=vapC28
contig_1	Pyrodigal	CDS	707947	708348	.	+	0	ID=GCA000153685_00642;Name=Ribonuclease VapC28;locus_tag=GCA000153685_00642;product=Ribonuclease VapC28;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC28;Parent=GCA000153685_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19686,RefSeq:WP_003403187.1,SO:0001217,UniParc:UPI0000139B25,UniRef:UniRef100_P9WF81,UniRef:UniRef50_P9WF81,UniRef:UniRef90_P9WF81;ec_number=3.1.-.-
contig_1	Infernal	gene	708648	708708	.	+	.	ID=GCA000153685_00643_gene;locus_tag=GCA000153685_00643;gene=b55
contig_1	Infernal	ncRNA	708648	708708	3.8e-15	+	.	ID=GCA000153685_00643;Name=Mycobacterium B11;locus_tag=GCA000153685_00643;product=Mycobacterium B11;Dbxref=RFAM:RF01783;Parent=GCA000153685_00643_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01783
contig_1	Pyrodigal	gene	708936	709133	.	-	.	ID=GCA000153685_00644_gene;locus_tag=GCA000153685_00644
contig_1	Pyrodigal	CDS	708936	709133	.	-	0	ID=GCA000153685_00644;Name=putative protein Rv0609B;locus_tag=GCA000153685_00644;product=putative protein Rv0609B;Parent=GCA000153685_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403191.1,SO:0001217,UniParc:UPI0001900F98,UniRef:UniRef100_P0DN33,UniRef:UniRef50_P0DN33,UniRef:UniRef90_P0DN33
contig_1	Pyrodigal	gene	709213	710370	.	-	.	ID=GCA000153685_00645_gene;locus_tag=GCA000153685_00645
contig_1	Pyrodigal	CDS	709213	710370	.	-	0	ID=GCA000153685_00645;Name=hypothetical protein;locus_tag=GCA000153685_00645;product=hypothetical protein;Parent=GCA000153685_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900186.1,SO:0001217,UniParc:UPI00012781A9,UniRef:UniRef100_UPI00012781A9,UniRef:UniRef50_R4MF35,UniRef:UniRef90_R4MF35
contig_1	Pyrodigal	gene	710422	710643	.	-	.	ID=GCA000153685_00646_gene;locus_tag=GCA000153685_00646
contig_1	Pyrodigal	CDS	710422	710643	.	-	0	ID=GCA000153685_00646;Name=DUF4926 domain-containing protein;locus_tag=GCA000153685_00646;product=DUF4926 domain-containing protein;Parent=GCA000153685_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898525.1,SO:0001217,UniParc:UPI00005EE416,UniRef:UniRef100_I6XVR9,UniRef:UniRef50_I6XVR9,UniRef:UniRef90_I6XVR9
contig_1	Pyrodigal	gene	710842	711390	.	+	.	ID=GCA000153685_00647_gene;locus_tag=GCA000153685_00647
contig_1	Pyrodigal	CDS	710842	711390	.	+	0	ID=GCA000153685_00647;Name=hypothetical protein;locus_tag=GCA000153685_00647;product=hypothetical protein;Parent=GCA000153685_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911256.1,SO:0001217,UniParc:UPI00005EE417,UniRef:UniRef100_I6X9E8,UniRef:UniRef50_A0A7V3HWX4,UniRef:UniRef90_I6X9E8
contig_1	Pyrodigal	gene	711409	713976	.	-	.	ID=GCA000153685_00648_gene;locus_tag=GCA000153685_00648
contig_1	Pyrodigal	CDS	711409	713976	.	-	0	ID=GCA000153685_00648;Name=SEC-C domain-containing protein;locus_tag=GCA000153685_00648;product=SEC-C domain-containing protein;Parent=GCA000153685_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900188.1,SO:0001217,UniParc:UPI00000D10B0,UniRef:UniRef100_I6Y897,UniRef:UniRef50_A0A8E2LT69,UniRef:UniRef90_A0A9P1L9K1
contig_1	Pyrodigal	gene	714060	714809	.	+	.	ID=GCA000153685_00649_gene;locus_tag=GCA000153685_00649
contig_1	Pyrodigal	CDS	714060	714809	.	+	0	ID=GCA000153685_00649;Name=Galactose-1-phosphate uridylyltransferase;locus_tag=GCA000153685_00649;product=Galactose-1-phosphate uridylyltransferase;Parent=GCA000153685_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898528.1,SO:0001217,UniParc:UPI00005EE419,UniRef:UniRef100_A0A0H3LCR3,UniRef:UniRef50_A0A0H3LCR3,UniRef:UniRef90_A0A0H3LCR3
contig_1	Pyrodigal	gene	714809	715048	.	+	.	ID=GCA000153685_00650_gene;locus_tag=GCA000153685_00650
contig_1	Pyrodigal	CDS	714809	715048	.	+	0	ID=GCA000153685_00650;Name=Integral membrane protein;locus_tag=GCA000153685_00650;product=Integral membrane protein;Parent=GCA000153685_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE41A,UniRef:UniRef100_Q7D9J1,UniRef:UniRef50_R4LSK7,UniRef:UniRef90_Q7D9J1
contig_1	Pyrodigal	gene	715243	715470	.	+	.	ID=GCA000153685_00651_gene;locus_tag=GCA000153685_00651;gene=vapB29
contig_1	Pyrodigal	CDS	715243	715470	.	+	0	ID=GCA000153685_00651;Name=Putative antitoxin VapB29;locus_tag=GCA000153685_00651;product=Putative antitoxin VapB29;Dbxref=GO:0006355;gene=vapB29;Parent=GCA000153685_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403213.1,SO:0001217,UniParc:UPI00000D2B89,UniRef:UniRef100_P9WJ37,UniRef:UniRef50_P9WJ37,UniRef:UniRef90_P9WJ37
contig_1	Pyrodigal	gene	715467	715868	.	+	.	ID=GCA000153685_00652_gene;locus_tag=GCA000153685_00652;gene=vapC29
contig_1	Pyrodigal	CDS	715467	715868	.	+	0	ID=GCA000153685_00652;Name=type II toxin-antitoxin system ribonuclease VapC29;locus_tag=GCA000153685_00652;product=type II toxin-antitoxin system ribonuclease VapC29;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC29;Parent=GCA000153685_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403218,RefSeq:WP_003403218.1,SO:0001217,UniParc:UPI00000D10D0,UniRef:UniRef100_P9WF79,UniRef:UniRef50_P9WF79,UniRef:UniRef90_P9WF79;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	715997	716692	.	+	.	ID=GCA000153685_00653_gene;locus_tag=GCA000153685_00653
contig_1	Pyrodigal	CDS	715997	716692	.	+	0	ID=GCA000153685_00653;Name=Galactose-1-phosphate uridylyltransferase;locus_tag=GCA000153685_00653;product=Galactose-1-phosphate uridylyltransferase;Parent=GCA000153685_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00965,SO:0001217,UniParc:UPI00000D3ACB,UniRef:UniRef100_Q79FY4,UniRef:UniRef50_Q79FY4,UniRef:UniRef90_Q79FY4;ec_number=2.7.7.12
contig_1	Pyrodigal	gene	716710	717180	.	+	.	ID=GCA000153685_00654_gene;locus_tag=GCA000153685_00654;gene=galT
contig_1	Pyrodigal	CDS	716710	717180	.	+	0	ID=GCA000153685_00654;Name=galactose-1-phosphate uridylyltransferase;locus_tag=GCA000153685_00654;product=galactose-1-phosphate uridylyltransferase;Dbxref=GO:0006012,GO:0008108,GO:0008270;gene=galT;Parent=GCA000153685_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00965,RefSeq:WP_003900190.1,SO:0001217,UniParc:UPI00005F6135,UniRef:UniRef100_A0A1R3XWX5,UniRef:UniRef50_H6MXE0,UniRef:UniRef90_A0A1R3XWX5;ec_number=2.7.7.12
contig_1	Pyrodigal	gene	717177	718268	.	+	.	ID=GCA000153685_00655_gene;locus_tag=GCA000153685_00655;gene=galK
contig_1	Pyrodigal	CDS	717177	718268	.	+	0	ID=GCA000153685_00655;Name=galactokinase;locus_tag=GCA000153685_00655;product=galactokinase;Dbxref=GO:0000287,GO:0004335,GO:0005524,GO:0005829,GO:0006012;gene=galK;Parent=GCA000153685_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00849,RefSeq:WP_003906403.1,SO:0001217,UniParc:UPI000012B05C,UniRef:UniRef100_P9WN63,UniRef:UniRef50_P9WN63,UniRef:UniRef90_P9WN63;ec_number=2.7.1.6
contig_1	Pyrodigal	gene	718663	719727	.	+	.	ID=GCA000153685_00656_gene;locus_tag=GCA000153685_00656
contig_1	Pyrodigal	CDS	718663	719727	.	+	0	ID=GCA000153685_00656;Name=DUF4189 domain-containing protein;locus_tag=GCA000153685_00656;product=DUF4189 domain-containing protein;Parent=GCA000153685_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898532.1,SO:0001217,UniParc:UPI00000D1166,UniRef:UniRef100_I6X9F4,UniRef:UniRef50_A0A829CBW5,UniRef:UniRef90_A0A829CBW5
contig_1	Pyrodigal	gene	719831	720778	.	+	.	ID=GCA000153685_00657_gene;locus_tag=GCA000153685_00657
contig_1	Pyrodigal	CDS	719831	720778	.	+	0	ID=GCA000153685_00657;Name=DUF732 domain-containing protein;locus_tag=GCA000153685_00657;product=DUF732 domain-containing protein;Parent=GCA000153685_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403232.1,SO:0001217,UniParc:UPI00001A8F0A,UniRef:UniRef100_P96912,UniRef:UniRef50_A0A172UW02,UniRef:UniRef90_R4M368
contig_1	Pyrodigal	gene	720871	721125	.	+	.	ID=GCA000153685_00658_gene;locus_tag=GCA000153685_00658;gene=vapB30
contig_1	Pyrodigal	CDS	720871	721125	.	+	0	ID=GCA000153685_00658;Name=type II toxin-antitoxin system antitoxin VapB30;locus_tag=GCA000153685_00658;product=type II toxin-antitoxin system antitoxin VapB30;Dbxref=GO:0045927;gene=vapB30;Parent=GCA000153685_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403235,RefSeq:WP_003403235.1,SO:0001217,UniParc:UPI00000D119D,UniRef:UniRef100_P9WJ35,UniRef:UniRef50_A0QRY5,UniRef:UniRef90_P9WJ35
contig_1	Pyrodigal	gene	721125	721520	.	+	.	ID=GCA000153685_00659_gene;locus_tag=GCA000153685_00659;gene=vapC30
contig_1	Pyrodigal	CDS	721125	721520	.	+	0	ID=GCA000153685_00659;Name=type II toxin-antitoxin system toxin ribonuclease C30;locus_tag=GCA000153685_00659;product=type II toxin-antitoxin system toxin ribonuclease C30;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC30;Parent=GCA000153685_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403236,KEGG:K19686,RefSeq:WP_003403236.1,SO:0001217,UniParc:UPI0000139B43,UniRef:UniRef100_P9WF77,UniRef:UniRef50_A0QRY6,UniRef:UniRef90_P9WF77;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	721614	722354	.	-	.	ID=GCA000153685_00660_gene;locus_tag=GCA000153685_00660
contig_1	Pyrodigal	CDS	721614	722354	.	-	0	ID=GCA000153685_00660;Name=TVP38/TMEM64 family membrane protein Rv0625c;locus_tag=GCA000153685_00660;product=TVP38/TMEM64 family membrane protein Rv0625c;Dbxref=GO:0005886;Parent=GCA000153685_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403239.1,SO:0001217,UniParc:UPI0000139B45,UniRef:UniRef100_P9WFS5,UniRef:UniRef50_P9WFS5,UniRef:UniRef90_P9WFS5
contig_1	Pyrodigal	gene	722486	722746	.	+	.	ID=GCA000153685_00661_gene;locus_tag=GCA000153685_00661;gene=vapB5
contig_1	Pyrodigal	CDS	722486	722746	.	+	0	ID=GCA000153685_00661;Name=Putative antitoxin VapB5;locus_tag=GCA000153685_00661;product=Putative antitoxin VapB5;Dbxref=GO:0097351;gene=vapB5;Parent=GCA000153685_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403244.1,SO:0001217,UniParc:UPI00000D1041,UniRef:UniRef100_P9WF19,UniRef:UniRef50_P9WF19,UniRef:UniRef90_P9WF19
contig_1	Pyrodigal	gene	722743	723150	.	+	.	ID=GCA000153685_00662_gene;locus_tag=GCA000153685_00662;gene=vapC5
contig_1	Pyrodigal	CDS	722743	723150	.	+	0	ID=GCA000153685_00662;Name=Ribonuclease VapC5;locus_tag=GCA000153685_00662;product=Ribonuclease VapC5;Dbxref=GO:0000287,GO:0004521,GO:0005576;gene=vapC5;Parent=GCA000153685_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403246.1,SO:0001217,UniParc:UPI00000C14F7,UniRef:UniRef100_P96917,UniRef:UniRef50_P96917,UniRef:UniRef90_P96917;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	723222	724373	.	-	.	ID=GCA000153685_00663_gene;locus_tag=GCA000153685_00663
contig_1	Pyrodigal	CDS	723222	724373	.	-	0	ID=GCA000153685_00663;Name=putative protein Mb0644c;locus_tag=GCA000153685_00663;product=putative protein Mb0644c;Dbxref=GO:0005886;Parent=GCA000153685_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403248.1,SO:0001217,UniParc:UPI0000139B4F,UniRef:UniRef100_P9WKS7,UniRef:UniRef50_P9WKR9,UniRef:UniRef90_P9WKS7
contig_1	Pyrodigal	gene	724466	726193	.	-	.	ID=GCA000153685_00664_gene;locus_tag=GCA000153685_00664;gene=recD
contig_1	Pyrodigal	CDS	724466	726193	.	-	0	ID=GCA000153685_00664;Name=exodeoxyribonuclease V subunit alpha;locus_tag=GCA000153685_00664;product=exodeoxyribonuclease V subunit alpha;Dbxref=GO:0000724,GO:0003677,GO:0003689,GO:0004386,GO:0005524,GO:0005829,GO:0005886,GO:0006281,GO:0006310,GO:0008854,GO:0009274,GO:0009338,GO:0016853,GO:0016887,GO:0017116,GO:0043139,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recD;Parent=GCA000153685_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900979.1,SO:0001217,UniParc:UPI00000CCC12,UniRef:UniRef100_P9WHJ1,UniRef:UniRef50_P9WHJ1,UniRef:UniRef90_P9WHJ1;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	726190	729474	.	-	.	ID=GCA000153685_00665_gene;locus_tag=GCA000153685_00665;gene=recC
contig_1	Pyrodigal	CDS	726190	729474	.	-	0	ID=GCA000153685_00665;Name=exodeoxyribonuclease V subunit gamma;locus_tag=GCA000153685_00665;product=exodeoxyribonuclease V subunit gamma;Dbxref=GO:0000287,GO:0000724,GO:0000725,GO:0003677,GO:0003689,GO:0005524,GO:0005829,GO:0005886,GO:0006281,GO:0006310,GO:0008854,GO:0009274,GO:0009338,GO:0016853,GO:0016887,GO:0043138,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=recC;Parent=GCA000153685_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003905355.1,SO:0001217,UniParc:UPI000012A2D2,UniRef:UniRef100_P9WMQ3,UniRef:UniRef50_P9WMQ3,UniRef:UniRef90_P9WMQ3;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	729474	732767	.	-	.	ID=GCA000153685_00666_gene;locus_tag=GCA000153685_00666;gene=recC
contig_1	Pyrodigal	CDS	729474	732767	.	-	0	ID=GCA000153685_00666;Name=exodeoxyribonuclease V subunit gamma;locus_tag=GCA000153685_00666;product=exodeoxyribonuclease V subunit gamma;Dbxref=GO:0000724,GO:0003677,GO:0003678,GO:0005524,GO:0005576,GO:0005886,GO:0006281,GO:0006310,GO:0008854,GO:0009274,GO:0009338;gene=recC;Parent=GCA000153685_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03583,RefSeq:WP_003900193.1,SO:0001217,UniParc:UPI000012A2D6,UniRef:UniRef100_P9WIQ5,UniRef:UniRef50_P9WIQ5,UniRef:UniRef90_P9WIQ5;ec_number=3.1.11.5
contig_1	Pyrodigal	gene	733044	733739	.	-	.	ID=GCA000153685_00667_gene;locus_tag=GCA000153685_00667
contig_1	Pyrodigal	CDS	733044	733739	.	-	0	ID=GCA000153685_00667;Name=crotonase/enoyl-CoA hydratase family protein;locus_tag=GCA000153685_00667;product=crotonase/enoyl-CoA hydratase family protein;Dbxref=GO:0003824;Parent=GCA000153685_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403259.1,SO:0001217,UniParc:UPI00000D5E46,UniRef:UniRef100_A5U015,UniRef:UniRef50_L7V6N5,UniRef:UniRef90_A0A0H3M2Q3
contig_1	Pyrodigal	gene	733788	734648	.	-	.	ID=GCA000153685_00668_gene;locus_tag=GCA000153685_00668
contig_1	Pyrodigal	CDS	733788	734648	.	-	0	ID=GCA000153685_00668;Name=Transmembrane protein;locus_tag=GCA000153685_00668;product=Transmembrane protein;Parent=GCA000153685_00668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCC13,UniRef:UniRef100_P96923,UniRef:UniRef50_A0A2I7W453,UniRef:UniRef90_A0A2I7W453
contig_1	Pyrodigal	gene	734781	735494	.	-	.	ID=GCA000153685_00669_gene;locus_tag=GCA000153685_00669
contig_1	Pyrodigal	CDS	734781	735494	.	-	0	ID=GCA000153685_00669;Name=putative glyoxalase II (Hydroxyacylglutathione hydrolase) (GLX II);locus_tag=GCA000153685_00669;product=putative glyoxalase II (Hydroxyacylglutathione hydrolase) (GLX II);Parent=GCA000153685_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403266.1,SO:0001217,UniParc:UPI00000D6001,UniRef:UniRef100_I6Y4A5,UniRef:UniRef50_A0A2I2KMI1,UniRef:UniRef90_I6Y4A5
contig_1	Pyrodigal	gene	735613	735825	.	+	.	ID=GCA000153685_00670_gene;locus_tag=GCA000153685_00670
contig_1	Pyrodigal	CDS	735613	735825	.	+	0	ID=GCA000153685_00670;Name=putative protein Rv0634A;locus_tag=GCA000153685_00670;product=putative protein Rv0634A;Parent=GCA000153685_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898537.1,SO:0001217,UniParc:UPI00005EE420,UniRef:UniRef100_P9WKS5,UniRef:UniRef50_P9WKS5,UniRef:UniRef90_P9WKS5
contig_1	tRNAscan-SE	gene	735955	736027	.	+	.	ID=GCA000153685_00671_gene;locus_tag=GCA000153685_00671;gene=trnT
contig_1	tRNAscan-SE	tRNA	735955	736027	.	+	.	ID=GCA000153685_00671;Name=tRNA-Thr(ggt);locus_tag=GCA000153685_00671;product=tRNA-Thr(ggt);gene=trnT;anti_codon=ggt;amino_acid=Thr;Parent=GCA000153685_00671_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	736064	736137	.	+	.	ID=GCA000153685_00672_gene;locus_tag=GCA000153685_00672;gene=trnM
contig_1	tRNAscan-SE	tRNA	736064	736137	.	+	.	ID=GCA000153685_00672;Name=tRNA-Met(cat);locus_tag=GCA000153685_00672;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000153685_00672_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	736173	736340	.	+	.	ID=GCA000153685_00673_gene;locus_tag=GCA000153685_00673;gene=rpmG
contig_1	Pyrodigal	CDS	736173	736340	.	+	0	ID=GCA000153685_00673;Name=50S ribosomal protein L33;locus_tag=GCA000153685_00673;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000153685_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_003898538.1,SO:0001217,UniParc:UPI0000132FC5,UniRef:UniRef100_P9WH95,UniRef:UniRef50_P9WH95,UniRef:UniRef90_P9WH95
contig_1	Pyrodigal	gene	736391	736867	.	+	.	ID=GCA000153685_00674_gene;locus_tag=GCA000153685_00674;gene=hadA
contig_1	Pyrodigal	CDS	736391	736867	.	+	0	ID=GCA000153685_00674;Name=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;locus_tag=GCA000153685_00674;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;Dbxref=GO:0005886,GO:0006633,GO:0019171;gene=hadA;Parent=GCA000153685_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403277.1,SO:0001217,UniParc:UPI00000D11D7,UniRef:UniRef100_P9WFK1,UniRef:UniRef50_P9WFK1,UniRef:UniRef90_P9WFK1
contig_1	Pyrodigal	gene	736854	737282	.	+	.	ID=GCA000153685_00675_gene;locus_tag=GCA000153685_00675;gene=hadB
contig_1	Pyrodigal	CDS	736854	737282	.	+	0	ID=GCA000153685_00675;Name=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;locus_tag=GCA000153685_00675;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;Dbxref=GO:0071768;gene=hadB;Parent=GCA000153685_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003903106.1,SO:0001217,UniParc:UPI00000D5E80,UniRef:UniRef100_I6WYY7,UniRef:UniRef50_A0A9P2T990,UniRef:UniRef90_I6WYY7
contig_1	Pyrodigal	gene	737286	737786	.	+	.	ID=GCA000153685_00676_gene;locus_tag=GCA000153685_00676;gene=hadC
contig_1	Pyrodigal	CDS	737286	737786	.	+	0	ID=GCA000153685_00676;Name=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;locus_tag=GCA000153685_00676;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;Dbxref=GO:0005886,GO:0006633,GO:0019171,GO:0030497,GO:0042759;gene=hadC;Parent=GCA000153685_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27073,RefSeq:WP_003403282.1,SO:0001217,UniParc:UPI00000D1055,UniRef:UniRef100_P9WFJ9,UniRef:UniRef50_P9WFJ9,UniRef:UniRef90_P9WFJ9;ec_number=4.2.1.-
contig_1	tRNAscan-SE	gene	737985	738057	.	+	.	ID=GCA000153685_00677_gene;locus_tag=GCA000153685_00677;gene=trnW
contig_1	tRNAscan-SE	tRNA	737985	738057	.	+	.	ID=GCA000153685_00677;Name=tRNA-Trp(cca);locus_tag=GCA000153685_00677;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000153685_00677_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	Pyrodigal	gene	738198	738683	.	+	.	ID=GCA000153685_00678_gene;locus_tag=GCA000153685_00678;gene=secE
contig_1	Pyrodigal	CDS	738198	738683	.	+	0	ID=GCA000153685_00678;Name=preprotein translocase subunit SecE;locus_tag=GCA000153685_00678;product=preprotein translocase subunit SecE;Dbxref=GO:0005886,GO:0006605,GO:0008320,GO:0009306,GO:0043952,GO:0065002;gene=secE;Parent=GCA000153685_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403284.1,SO:0001217,UniParc:UPI0000135799,UniRef:UniRef100_P9WGN7,UniRef:UniRef50_P9WGN7,UniRef:UniRef90_P9WGN7
contig_1	Pyrodigal	gene	738715	739431	.	+	.	ID=GCA000153685_00679_gene;locus_tag=GCA000153685_00679;gene=nusG
contig_1	Pyrodigal	CDS	738715	739431	.	+	0	ID=GCA000153685_00679;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000153685_00679;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0005886,GO:0006353,GO:0009274,GO:0031564,GO:0032784,GO:0140673;gene=nusG;Parent=GCA000153685_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,KEGG:K02601,RefSeq:WP_003403288.1,SO:0001217,UniParc:UPI0000130A81,UniRef:UniRef100_P9WIU9,UniRef:UniRef50_P9WIU9,UniRef:UniRef90_P9WIU9
contig_1	Pyrodigal	gene	739483	739911	.	+	.	ID=GCA000153685_00680_gene;locus_tag=GCA000153685_00680;gene=rplK
contig_1	Pyrodigal	CDS	739483	739911	.	+	0	ID=GCA000153685_00680;Name=50S ribosomal protein L11;locus_tag=GCA000153685_00680;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0009274,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000153685_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_003403291.1,SO:0001217,UniParc:UPI0000133B89,UniRef:UniRef100_P9WHE5,UniRef:UniRef50_P9WHE5,UniRef:UniRef90_P9WHE5
contig_1	Pyrodigal	gene	739978	740685	.	+	.	ID=GCA000153685_00681_gene;locus_tag=GCA000153685_00681;gene=rplA
contig_1	Pyrodigal	CDS	739978	740685	.	+	0	ID=GCA000153685_00681;Name=50S ribosomal protein L1;locus_tag=GCA000153685_00681;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843;gene=rplA;Parent=GCA000153685_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_003403292.1,SO:0001217,UniParc:UPI0000133CF2,UniRef:UniRef100_P9WHC7,UniRef:UniRef50_P9WHC7,UniRef:UniRef90_P9WHC7
contig_1	Pyrodigal	gene	740759	741655	.	-	.	ID=GCA000153685_00682_gene;locus_tag=GCA000153685_00682;gene=mmaA4
contig_1	Pyrodigal	CDS	740759	741655	.	-	0	ID=GCA000153685_00682;Name=hydroxymycolate synthase MmaA4;locus_tag=GCA000153685_00682;product=hydroxymycolate synthase MmaA4;Dbxref=GO:0005886,GO:0008168,GO:0008610,GO:0008757,GO:0008825,GO:0009274,GO:0032259,GO:0071768;gene=mmaA4;Parent=GCA000153685_00682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900195,COG:COG2230,COG:I,SO:0001217,UniParc:UPI00005EE422,UniRef:UniRef100_A0A066S9D1,UniRef:UniRef50_P9WPB5,UniRef:UniRef90_Q79FX8;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	741729	742610	.	-	.	ID=GCA000153685_00683_gene;locus_tag=GCA000153685_00683;gene=mmaA3
contig_1	Pyrodigal	CDS	741729	742610	.	-	0	ID=GCA000153685_00683;Name=methoxy mycolic acid synthase MmaA3;locus_tag=GCA000153685_00683;product=methoxy mycolic acid synthase MmaA3;Dbxref=GO:0005886,GO:0008171,GO:0008610,GO:0008825,GO:0032259,GO:0071768;gene=mmaA3;Parent=GCA000153685_00683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403302,KEGG:K26593,RefSeq:WP_003403302.1,SO:0001217,UniParc:UPI00000D4706,UniRef:UniRef100_P0CH91,UniRef:UniRef50_Q79FX6,UniRef:UniRef90_P0CH91;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	742758	743678	.	-	.	ID=GCA000153685_00684_gene;locus_tag=GCA000153685_00684;gene=mmaA2
contig_1	Pyrodigal	CDS	742758	743678	.	-	0	ID=GCA000153685_00684;Name=cyclopropane mycolic acid synthase family methyltransferase;locus_tag=GCA000153685_00684;product=cyclopropane mycolic acid synthase family methyltransferase;Dbxref=GO:0005886,GO:0008168,GO:0008610,GO:0008825,GO:0009274,GO:0032259,GO:0071768;gene=mmaA2;Parent=GCA000153685_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C54DF1,UniRef:UniRef100_A0A0E7ZVC1,UniRef:UniRef50_Q79FX6,UniRef:UniRef90_Q79FX6;ec_number=2.1.1.79
contig_1	Pyrodigal	gene	743788	744648	.	-	.	ID=GCA000153685_00685_gene;locus_tag=GCA000153685_00685;gene=mmaA1
contig_1	Pyrodigal	CDS	743788	744648	.	-	0	ID=GCA000153685_00685;Name=mycolic acid methyltransferase MmaA1;locus_tag=GCA000153685_00685;product=mycolic acid methyltransferase MmaA1;Dbxref=GO:0008168,GO:0008610,GO:0008825,GO:0016859,GO:0032259,GO:0071768;gene=mmaA1;Parent=GCA000153685_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403310,KEGG:K26594,RefSeq:WP_003403310.1,SO:0001217,UniParc:UPI000012F25C,UniRef:UniRef100_P9WPB1,UniRef:UniRef50_P9WPB7,UniRef:UniRef90_P9WPB1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	744695	745600	.	-	.	ID=GCA000153685_00686_gene;locus_tag=GCA000153685_00686;gene=lipG
contig_1	Pyrodigal	CDS	744695	745600	.	-	0	ID=GCA000153685_00686;Name=lipase/esterase LipG;locus_tag=GCA000153685_00686;product=lipase/esterase LipG;gene=lipG;Parent=GCA000153685_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403314,BlastRules:WP_010908599,RefSeq:WP_003403314.1,SO:0001217,UniParc:UPI0000165242,UniRef:UniRef100_A5U031,UniRef:UniRef50_A0A3E2MTG7,UniRef:UniRef90_A5U031
contig_1	Pyrodigal	gene	745612	747078	.	-	.	ID=GCA000153685_00687_gene;locus_tag=GCA000153685_00687;gene=aarF
contig_1	Pyrodigal	CDS	745612	747078	.	-	0	ID=GCA000153685_00687;Name=putative protein Rv0647c;locus_tag=GCA000153685_00687;product=putative protein Rv0647c;Dbxref=GO:0004672,GO:0005524,GO:0005829,GO:0005886,GO:0009274;gene=aarF;Parent=GCA000153685_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0661,COG:HT,RefSeq:WP_003403317.1,SO:0001217,UniParc:UPI0000164F9F,UniRef:UniRef100_P9WQI1,UniRef:UniRef50_P9WQI1,UniRef:UniRef90_P9WQI1
contig_1	Pyrodigal	gene	747164	751360	.	+	.	ID=GCA000153685_00688_gene;locus_tag=GCA000153685_00688
contig_1	Pyrodigal	CDS	747164	751360	.	+	0	ID=GCA000153685_00688;Name=Alpha-mannosidase;locus_tag=GCA000153685_00688;product=Alpha-mannosidase;Parent=GCA000153685_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917325.1,SO:0001217,UniParc:UPI00005EE424,UniRef:UniRef100_A0A0H3L668,UniRef:UniRef50_P96937,UniRef:UniRef90_P96937
contig_1	Pyrodigal	gene	751357	752031	.	+	.	ID=GCA000153685_00689_gene;locus_tag=GCA000153685_00689;gene=fabD2
contig_1	Pyrodigal	CDS	751357	752031	.	+	0	ID=GCA000153685_00689;Name=putative malonyl CoA-acyl carrier protein transacylase FabD2 (MCT);locus_tag=GCA000153685_00689;product=putative malonyl CoA-acyl carrier protein transacylase FabD2 (MCT);gene=fabD2;Parent=GCA000153685_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036365.1,SO:0001217,UniParc:UPI0003AB4A85,UniRef:UniRef100_UPI0003AB4A85,UniRef:UniRef50_Q79FX5,UniRef:UniRef90_Q79FX5
contig_1	Pyrodigal	gene	752031	752939	.	+	.	ID=GCA000153685_00690_gene;locus_tag=GCA000153685_00690
contig_1	Pyrodigal	CDS	752031	752939	.	+	0	ID=GCA000153685_00690;Name=putative sugar kinase;locus_tag=GCA000153685_00690;product=putative sugar kinase;Parent=GCA000153685_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403330.1,SO:0001217,UniParc:UPI00000D5F0E,UniRef:UniRef100_I6Y8D3,UniRef:UniRef50_A0A378TF16,UniRef:UniRef90_I6Y8D3
contig_1	Pyrodigal	gene	753270	753806	.	+	.	ID=GCA000153685_00691_gene;locus_tag=GCA000153685_00691;gene=rplJ
contig_1	Pyrodigal	CDS	753270	753806	.	+	0	ID=GCA000153685_00691;Name=50S ribosomal protein L10;locus_tag=GCA000153685_00691;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0005886,GO:0006412,GO:0009274,GO:0015934,GO:0022625,GO:0070180;gene=rplJ;Parent=GCA000153685_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02864,RefSeq:WP_003403341.1,SO:0001217,UniParc:UPI0000133B3E,UniRef:UniRef100_P9WHE7,UniRef:UniRef50_P9WHE7,UniRef:UniRef90_P9WHE7
contig_1	Pyrodigal	gene	753843	754235	.	+	.	ID=GCA000153685_00692_gene;locus_tag=GCA000153685_00692;gene=rplL
contig_1	Pyrodigal	CDS	753843	754235	.	+	0	ID=GCA000153685_00692;Name=50S ribosomal protein L7/L12;locus_tag=GCA000153685_00692;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0009274,GO:0022625;gene=rplL;Parent=GCA000153685_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403353.1,SO:0001217,UniParc:UPI000004A4BD,UniRef:UniRef100_P9WHE3,UniRef:UniRef50_P9WHE3,UniRef:UniRef90_P9WHE3
contig_1	Pyrodigal	gene	754228	754923	.	-	.	ID=GCA000153685_00693_gene;locus_tag=GCA000153685_00693
contig_1	Pyrodigal	CDS	754228	754923	.	-	0	ID=GCA000153685_00693;Name=putative transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_00693;product=putative transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403355.1,SO:0001217,UniParc:UPI0000165243,UniRef:UniRef100_P96941,UniRef:UniRef50_Q73SE7,UniRef:UniRef90_P96941
contig_1	Pyrodigal	gene	754994	756499	.	+	.	ID=GCA000153685_00694_gene;locus_tag=GCA000153685_00694
contig_1	Pyrodigal	CDS	754994	756499	.	+	0	ID=GCA000153685_00694;Name=carotenoid cleavage oxygenase;locus_tag=GCA000153685_00694;product=carotenoid cleavage oxygenase;Dbxref=GO:0010436,GO:0016118,GO:0016121,GO:0046872;Parent=GCA000153685_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403360,KEGG:K11159,RefSeq:WP_003403360.1,SO:0001217,UniParc:UPI00000D5F64,UniRef:UniRef100_P9WPR5,UniRef:UniRef50_P9WPR5,UniRef:UniRef90_P9WPR5;ec_number=1.13.11.-
contig_1	Pyrodigal	gene	756580	757590	.	+	.	ID=GCA000153685_00695_gene;locus_tag=GCA000153685_00695;gene=mkl
contig_1	Pyrodigal	CDS	756580	757590	.	+	0	ID=GCA000153685_00695;Name=putative ribonucleotide transport ATP-binding protein mkl;locus_tag=GCA000153685_00695;product=putative ribonucleotide transport ATP-binding protein mkl;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0016887,GO:0070508;gene=mkl;Parent=GCA000153685_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1127,COG:M,RefSeq:WP_003911248.1,SO:0001217,UniParc:UPI0000164FA0,UniRef:UniRef100_P9WQL5,UniRef:UniRef50_P9WQL5,UniRef:UniRef90_P9WQL5
contig_1	Pyrodigal	gene	757978	758229	.	-	.	ID=GCA000153685_00696_gene;locus_tag=GCA000153685_00696;gene=vapC6
contig_1	Pyrodigal	CDS	757978	758229	.	-	0	ID=GCA000153685_00696;Name=Ribonuclease VapC6;locus_tag=GCA000153685_00696;product=Ribonuclease VapC6;Dbxref=GO:0000287,GO:0004540;gene=vapC6;Parent=GCA000153685_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE426,UniRef:UniRef100_A0A0H3L682,UniRef:UniRef50_P9WFB5,UniRef:UniRef90_P9WFB5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	758456	758611	.	-	.	ID=GCA000153685_00697_gene;locus_tag=GCA000153685_00697;gene=vapB6
contig_1	Pyrodigal	CDS	758456	758611	.	-	0	ID=GCA000153685_00697;Name=Putative antitoxin VapB6;locus_tag=GCA000153685_00697;product=Putative antitoxin VapB6;gene=vapB6;Parent=GCA000153685_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403368.1,SO:0001217,UniParc:UPI00000D0FF8,UniRef:UniRef100_P9WJ57,UniRef:UniRef50_P9WJ57,UniRef:UniRef90_P9WJ57
contig_1	Pyrodigal	gene	758687	759403	.	-	.	ID=GCA000153685_00698_gene;locus_tag=GCA000153685_00698
contig_1	Pyrodigal	CDS	758687	759403	.	-	0	ID=GCA000153685_00698;Name=Integral membrane protein;locus_tag=GCA000153685_00698;product=Integral membrane protein;Parent=GCA000153685_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403371.1,SO:0001217,UniParc:UPI0000164FA1,UniRef:UniRef100_A5U043,UniRef:UniRef50_A0A1G7KHU9,UniRef:UniRef90_R4MDV6
contig_1	Pyrodigal	gene	759679	759912	.	-	.	ID=GCA000153685_00699_gene;locus_tag=GCA000153685_00699;gene=mazF2
contig_1	Pyrodigal	CDS	759679	759912	.	-	0	ID=GCA000153685_00699;Name=Toxin MazF2;locus_tag=GCA000153685_00699;product=Toxin MazF2;gene=mazF2;Parent=GCA000153685_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE427,UniRef:UniRef100_A0A0H3LCX8,UniRef:UniRef50_A0A0H3LCX8,UniRef:UniRef90_A0A0H3LCX8
contig_1	Pyrodigal	gene	759974	760225	.	-	.	ID=GCA000153685_00700_gene;locus_tag=GCA000153685_00700;gene=mazE2
contig_1	Pyrodigal	CDS	759974	760225	.	-	0	ID=GCA000153685_00700;Name=putative antitoxin MazE2;locus_tag=GCA000153685_00700;product=putative antitoxin MazE2;Dbxref=GO:0006355;gene=mazE2;Parent=GCA000153685_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26982,SO:0001217,UniParc:UPI00000D2B90,UniRef:UniRef100_O06779,UniRef:UniRef50_O06779,UniRef:UniRef90_O06779
contig_1	Pyrodigal	gene	760329	760766	.	-	.	ID=GCA000153685_00701_gene;locus_tag=GCA000153685_00701;gene=vapC7
contig_1	Pyrodigal	CDS	760329	760766	.	-	0	ID=GCA000153685_00701;Name=Ribonuclease VapC7;locus_tag=GCA000153685_00701;product=Ribonuclease VapC7;Dbxref=GO:0000287,GO:0004540;gene=vapC7;Parent=GCA000153685_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403386.1,SO:0001217,UniParc:UPI00000D1185,UniRef:UniRef100_P9WFB3,UniRef:UniRef50_P9WFB3,UniRef:UniRef90_P9WFB3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	760763	761017	.	-	.	ID=GCA000153685_00702_gene;locus_tag=GCA000153685_00702;gene=vapB7
contig_1	Pyrodigal	CDS	760763	761017	.	-	0	ID=GCA000153685_00702;Name=Putative antitoxin VapB7;locus_tag=GCA000153685_00702;product=Putative antitoxin VapB7;Dbxref=GO:0005886;gene=vapB7;Parent=GCA000153685_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911263.1,SO:0001217,UniParc:UPI00005EE428,UniRef:UniRef100_O06777,UniRef:UniRef50_O06777,UniRef:UniRef90_O06777
contig_1	Pyrodigal	gene	761131	763494	.	+	.	ID=GCA000153685_00703_gene;locus_tag=GCA000153685_00703;gene=atsD
contig_1	Pyrodigal	CDS	761131	763494	.	+	0	ID=GCA000153685_00703;Name=arylsulfatase AtsD;locus_tag=GCA000153685_00703;product=arylsulfatase AtsD;gene=atsD;Parent=GCA000153685_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898547,RefSeq:WP_003898547.1,SO:0001217,UniParc:UPI00000D5E51,UniRef:UniRef100_I6XVW9,UniRef:UniRef50_A0A3S4SNT3,UniRef:UniRef90_A0A5R1ZBW1
contig_1	Pyrodigal	gene	763526	763798	.	+	.	ID=GCA000153685_00704_gene;locus_tag=GCA000153685_00704;gene=vapB8
contig_1	Pyrodigal	CDS	763526	763798	.	+	0	ID=GCA000153685_00704;Name=Putative antitoxin VapB8;locus_tag=GCA000153685_00704;product=Putative antitoxin VapB8;gene=vapB8;Parent=GCA000153685_00704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900200.1,SO:0001217,UniParc:UPI00000C14D6,UniRef:UniRef100_O06775,UniRef:UniRef50_O06775,UniRef:UniRef90_O06775
contig_1	Pyrodigal	gene	763795	764133	.	+	.	ID=GCA000153685_00705_gene;locus_tag=GCA000153685_00705;gene=vapC8
contig_1	Pyrodigal	CDS	763795	764133	.	+	0	ID=GCA000153685_00705;Name=Ribonuclease VapC8;locus_tag=GCA000153685_00705;product=Ribonuclease VapC8;Dbxref=GO:0004518,GO:0046872;gene=vapC8;Parent=GCA000153685_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403405.1,SO:0001217,UniParc:UPI00000D11BF,UniRef:UniRef100_P9WFB1,UniRef:UniRef50_P9WFB1,UniRef:UniRef90_P9WFB1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	764288	764518	.	+	.	ID=GCA000153685_00706_gene;locus_tag=GCA000153685_00706
contig_1	Pyrodigal	CDS	764288	764518	.	+	0	ID=GCA000153685_00706;Name=hypothetical protein;locus_tag=GCA000153685_00706;product=hypothetical protein;Parent=GCA000153685_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2B92,UniRef:UniRef100_Q8VKG6,UniRef:UniRef50_Q8VKG6,UniRef:UniRef90_Q8VKG6
contig_1	Pyrodigal	gene	764801	768319	.	+	.	ID=GCA000153685_00707_gene;locus_tag=GCA000153685_00707
contig_1	Pyrodigal	CDS	764801	768319	.	+	0	ID=GCA000153685_00707;Name=DNA-directed RNA polymerase subunit beta;locus_tag=GCA000153685_00707;product=DNA-directed RNA polymerase subunit beta;Dbxref=GO:0003677,GO:0003899,GO:0006351,GO:0032549;Parent=GCA000153685_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03043,RefSeq:WP_003900992.1,SO:0001217,UniParc:UPI0000165245,UniRef:UniRef100_A0A679LBP2,UniRef:UniRef50_Q8G514,UniRef:UniRef90_V9ZCC8;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	768364	772314	.	+	.	ID=GCA000153685_00708_gene;locus_tag=GCA000153685_00708;gene=rpoC
contig_1	Pyrodigal	CDS	768364	772314	.	+	0	ID=GCA000153685_00708;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000153685_00708;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000153685_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,RefSeq:WP_003917327.1,SO:0001217,UniParc:UPI0000164FA2,UniRef:UniRef100_P9WGY6,UniRef:UniRef50_P9WGY7,UniRef:UniRef90_P9WGY7;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	772422	772535	.	+	.	ID=GCA000153685_00709_gene;locus_tag=GCA000153685_00709;gene=rpoC
contig_1	Pyrodigal	CDS	772422	772535	.	+	0	ID=GCA000153685_00709;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000153685_00709;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000153685_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,SO:0001217,UniParc:UPI0001900EE3,UniRef:UniRef100_A0A0H3L6W1,UniRef:UniRef50_P9WGY7,UniRef:UniRef90_P9WGY7;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	772678	774591	.	-	.	ID=GCA000153685_00710_gene;locus_tag=GCA000153685_00710
contig_1	Pyrodigal	CDS	772678	774591	.	-	0	ID=GCA000153685_00710;Name=neutral ceramidase;locus_tag=GCA000153685_00710;product=neutral ceramidase;Dbxref=GO:0005576,GO:0009274,GO:0016020,GO:0017040,GO:0042759,GO:0046512,GO:0046514,GO:0046872;Parent=GCA000153685_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900995.1,SO:0001217,UniParc:UPI000003FD8B,UniRef:UniRef100_O06769,UniRef:UniRef50_O06769,UniRef:UniRef90_O06769;ec_number=3.5.1.23
contig_1	Pyrodigal	gene	774786	775544	.	+	.	ID=GCA000153685_00711_gene;locus_tag=GCA000153685_00711;gene=end
contig_1	Pyrodigal	CDS	774786	775544	.	+	0	ID=GCA000153685_00711;Name=deoxyribonuclease IV;locus_tag=GCA000153685_00711;product=deoxyribonuclease IV;Dbxref=GO:0003677,GO:0003906,GO:0006281,GO:0006284,GO:0008081,GO:0008270,GO:0008833;gene=end;Parent=GCA000153685_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403419.1,SO:0001217,UniParc:UPI0000129ED0,UniRef:UniRef100_P9WQ13,UniRef:UniRef50_P9WQ13,UniRef:UniRef90_P9WQ13;ec_number=3.1.21.2
contig_1	Pyrodigal	gene	775576	776418	.	+	.	ID=GCA000153685_00712_gene;locus_tag=GCA000153685_00712;gene=lpqP
contig_1	Pyrodigal	CDS	775576	776418	.	+	0	ID=GCA000153685_00712;Name=Lipoprotein LpqP;locus_tag=GCA000153685_00712;product=Lipoprotein LpqP;gene=lpqP;Parent=GCA000153685_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403421.1,SO:0001217,UniParc:UPI00000D11BC,UniRef:UniRef100_I6XVY0,UniRef:UniRef50_A0A7I9ZAP0,UniRef:UniRef90_A0A0T9YWB3
contig_1	Pyrodigal	gene	776478	778106	.	+	.	ID=GCA000153685_00713_gene;locus_tag=GCA000153685_00713;gene=caiA
contig_1	Pyrodigal	CDS	776478	778106	.	+	0	ID=GCA000153685_00713;Name=Acyl-CoA dehydrogenase AidB;locus_tag=GCA000153685_00713;product=Acyl-CoA dehydrogenase AidB;gene=caiA;Parent=GCA000153685_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,KEGG:K09456,RefSeq:WP_003403423.1,SO:0001217,UniParc:UPI00000D0F6A,UniRef:UniRef100_A5U058,UniRef:UniRef50_K4RGA1,UniRef:UniRef90_A0A498PSU3
contig_1	Pyrodigal	gene	778117	779055	.	+	.	ID=GCA000153685_00714_gene;locus_tag=GCA000153685_00714
contig_1	Pyrodigal	CDS	778117	779055	.	+	0	ID=GCA000153685_00714;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_00714;product=Enoyl-CoA hydratase;Parent=GCA000153685_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403426.1,SO:0001217,UniParc:UPI00000D11EB,UniRef:UniRef100_I6Y8F2,UniRef:UniRef50_A0A2A2WL93,UniRef:UniRef90_A0A5R1ZC65
contig_1	Pyrodigal	gene	779058	779780	.	+	.	ID=GCA000153685_00715_gene;locus_tag=GCA000153685_00715;gene=paaX
contig_1	Pyrodigal	CDS	779058	779780	.	+	0	ID=GCA000153685_00715;Name=PaaX domain-containing protein%2C C-domain protein;locus_tag=GCA000153685_00715;product=PaaX domain-containing protein%2C C-domain protein;gene=paaX;Parent=GCA000153685_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02616,RefSeq:WP_003403429.1,SO:0001217,UniParc:UPI00000D112C,UniRef:UniRef100_I6WZ26,UniRef:UniRef50_I6WZ26,UniRef:UniRef90_I6WZ26
contig_1	Pyrodigal	gene	779777	780568	.	+	.	ID=GCA000153685_00716_gene;locus_tag=GCA000153685_00716
contig_1	Pyrodigal	CDS	779777	780568	.	+	0	ID=GCA000153685_00716;Name=crotonase/enoyl-CoA hydratase family protein;locus_tag=GCA000153685_00716;product=crotonase/enoyl-CoA hydratase family protein;Dbxref=GO:0003824;Parent=GCA000153685_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403433.1,SO:0001217,UniParc:UPI00000D5F2B,UniRef:UniRef100_A5U061,UniRef:UniRef50_L7V047,UniRef:UniRef90_A0A0H3L697
contig_1	Pyrodigal	gene	780580	783474	.	-	.	ID=GCA000153685_00717_gene;locus_tag=GCA000153685_00717;gene=mmpL5
contig_1	Pyrodigal	CDS	780580	783474	.	-	0	ID=GCA000153685_00717;Name=siderophore RND transporter MmpL5;locus_tag=GCA000153685_00717;product=siderophore RND transporter MmpL5;Dbxref=GO:0005576,GO:0005829,GO:0005886;gene=mmpL5;Parent=GCA000153685_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009935604,COG:COG2409,COG:R,RefSeq:WP_003898551.1,SO:0001217,UniParc:UPI0000164FA3,UniRef:UniRef100_P9WJV0,UniRef:UniRef50_P9WJV1,UniRef:UniRef90_P9WJV1
contig_1	Pyrodigal	gene	783471	783899	.	-	.	ID=GCA000153685_00718_gene;locus_tag=GCA000153685_00718;gene=mmpS5
contig_1	Pyrodigal	CDS	783471	783899	.	-	0	ID=GCA000153685_00718;Name=siderophore transporter accessory protein MmpS5;locus_tag=GCA000153685_00718;product=siderophore transporter accessory protein MmpS5;Dbxref=GO:0005576,GO:0005886;gene=mmpS5;Parent=GCA000153685_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403439,RefSeq:WP_003403439.1,SO:0001217,UniParc:UPI000012F290,UniRef:UniRef100_P9WJS7,UniRef:UniRef50_P9WJS7,UniRef:UniRef90_P9WJS7
contig_1	Pyrodigal	gene	783984	784481	.	+	.	ID=GCA000153685_00719_gene;locus_tag=GCA000153685_00719;gene=mmpR5
contig_1	Pyrodigal	CDS	783984	784481	.	+	0	ID=GCA000153685_00719;Name=HTH-type transcriptional regulator MmpR5;locus_tag=GCA000153685_00719;product=HTH-type transcriptional regulator MmpR5;Dbxref=GO:0003677;gene=mmpR5;Parent=GCA000153685_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403442.1,SO:0001217,UniParc:UPI00000D10FB,UniRef:UniRef100_I6Y8F7,UniRef:UniRef50_I6Y8F7,UniRef:UniRef90_I6Y8F7
contig_1	Pyrodigal	gene	784537	785034	.	-	.	ID=GCA000153685_00720_gene;locus_tag=GCA000153685_00720
contig_1	Pyrodigal	CDS	784537	785034	.	-	0	ID=GCA000153685_00720;Name=Conserved threonine rich protein;locus_tag=GCA000153685_00720;product=Conserved threonine rich protein;Parent=GCA000153685_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403446.1,SO:0001217,UniParc:UPI00000D108C,UniRef:UniRef100_I6WZ30,UniRef:UniRef50_A0A0I9TTA9,UniRef:UniRef90_I6WZ30
contig_1	Pyrodigal	gene	785036	785410	.	-	.	ID=GCA000153685_00721_gene;locus_tag=GCA000153685_00721
contig_1	Pyrodigal	CDS	785036	785410	.	-	0	ID=GCA000153685_00721;Name=DUF3060 domain-containing protein;locus_tag=GCA000153685_00721;product=DUF3060 domain-containing protein;Parent=GCA000153685_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403448.1,SO:0001217,UniParc:UPI00000D1012,UniRef:UniRef100_A5U066,UniRef:UniRef50_G8RPK3,UniRef:UniRef90_A0A1X2M001
contig_1	Pyrodigal	gene	785649	786305	.	+	.	ID=GCA000153685_00722_gene;locus_tag=GCA000153685_00722
contig_1	Pyrodigal	CDS	785649	786305	.	+	0	ID=GCA000153685_00722;Name=putative HTH-type transcriptional regulator Rv0681;locus_tag=GCA000153685_00722;product=putative HTH-type transcriptional regulator Rv0681;Dbxref=GO:0000976,GO:0003700,GO:0005886,GO:0006355;Parent=GCA000153685_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FC9,UniRef:UniRef100_O53789,UniRef:UniRef50_O53789,UniRef:UniRef90_O53789
contig_1	Pyrodigal	gene	786554	786928	.	+	.	ID=GCA000153685_00723_gene;locus_tag=GCA000153685_00723;gene=rpsL
contig_1	Pyrodigal	CDS	786554	786928	.	+	0	ID=GCA000153685_00723;Name=30S ribosomal protein S12;locus_tag=GCA000153685_00723;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsL;Parent=GCA000153685_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,KEGG:K02950,RefSeq:WP_003403453.1,SO:0001217,UniParc:UPI0000134C61,UniRef:UniRef100_P9WH63,UniRef:UniRef50_P9WH63,UniRef:UniRef90_P9WH63
contig_1	Pyrodigal	gene	786928	787398	.	+	.	ID=GCA000153685_00724_gene;locus_tag=GCA000153685_00724;gene=rpsG
contig_1	Pyrodigal	CDS	786928	787398	.	+	0	ID=GCA000153685_00724;Name=30S ribosomal protein S7;locus_tag=GCA000153685_00724;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000153685_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_003403456.1,SO:0001217,UniParc:UPI0000165247,UniRef:UniRef100_P9WH29,UniRef:UniRef50_P9WH29,UniRef:UniRef90_P9WH29
contig_1	Pyrodigal	gene	787479	789584	.	+	.	ID=GCA000153685_00725_gene;locus_tag=GCA000153685_00725;gene=fusA
contig_1	Pyrodigal	CDS	787479	789584	.	+	0	ID=GCA000153685_00725;Name=elongation factor G;locus_tag=GCA000153685_00725;product=elongation factor G;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790;gene=fusA;Parent=GCA000153685_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_003898554.1,SO:0001217,UniParc:UPI0000129CD4,UniRef:UniRef100_P9WNM7,UniRef:UniRef50_P9WNM7,UniRef:UniRef90_P9WNM7
contig_1	Pyrodigal	gene	789815	791005	.	+	.	ID=GCA000153685_00726_gene;locus_tag=GCA000153685_00726;gene=tuf
contig_1	Pyrodigal	CDS	789815	791005	.	+	0	ID=GCA000153685_00726;Name=elongation factor Tu;locus_tag=GCA000153685_00726;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414;gene=tuf;Parent=GCA000153685_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_003403463.1,SO:0001217,UniParc:UPI0000129DBB,UniRef:UniRef100_P9WNN1,UniRef:UniRef50_Q74JU6,UniRef:UniRef90_P9WNN1
contig_1	Pyrodigal	gene	791143	791940	.	+	.	ID=GCA000153685_00727_gene;locus_tag=GCA000153685_00727
contig_1	Pyrodigal	CDS	791143	791940	.	+	0	ID=GCA000153685_00727;Name=SHOCT domain-containing protein;locus_tag=GCA000153685_00727;product=SHOCT domain-containing protein;Parent=GCA000153685_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403465.1,SO:0001217,UniParc:UPI00000D1081,UniRef:UniRef100_A5U072,UniRef:UniRef50_L0IPH5,UniRef:UniRef90_R4LZS4
contig_1	Pyrodigal	gene	792093	792920	.	+	.	ID=GCA000153685_00728_gene;locus_tag=GCA000153685_00728
contig_1	Pyrodigal	CDS	792093	792920	.	+	0	ID=GCA000153685_00728;Name=Rv0687 family mycofactocin-dependent SDR oxidoreductase;locus_tag=GCA000153685_00728;product=Rv0687 family mycofactocin-dependent SDR oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403468,RefSeq:WP_003403468.1,SO:0001217,UniParc:UPI00000D5EAF,UniRef:UniRef100_P9WGS7,UniRef:UniRef50_Q73SC8,UniRef:UniRef90_P9WGS7;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	792934	794154	.	+	.	ID=GCA000153685_00729_gene;locus_tag=GCA000153685_00729
contig_1	Pyrodigal	CDS	792934	794154	.	+	0	ID=GCA000153685_00729;Name=Ferredoxin reductase;locus_tag=GCA000153685_00729;product=Ferredoxin reductase;Parent=GCA000153685_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898555.1,SO:0001217,UniParc:UPI00000D2B94,UniRef:UniRef100_A0A0H3L6Y7,UniRef:UniRef50_P95034,UniRef:UniRef90_P95034
contig_1	Pyrodigal	gene	794166	794414	.	+	.	ID=GCA000153685_00730_gene;locus_tag=GCA000153685_00730
contig_1	Pyrodigal	CDS	794166	794414	.	+	0	ID=GCA000153685_00730;Name=hypothetical protein;locus_tag=GCA000153685_00730;product=hypothetical protein;Parent=GCA000153685_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_178121162.1,SO:0001217,UniParc:UPI00039AA6A6,UniRef:UniRef100_A0A0E8VF26,UniRef:UniRef50_A0A0E8VF26,UniRef:UniRef90_A0A0E8VF26
contig_1	Pyrodigal	gene	795018	796067	.	-	.	ID=GCA000153685_00731_gene;locus_tag=GCA000153685_00731
contig_1	Pyrodigal	CDS	795018	796067	.	-	0	ID=GCA000153685_00731;Name=DUF2332 domain-containing protein;locus_tag=GCA000153685_00731;product=DUF2332 domain-containing protein;Parent=GCA000153685_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403477.1,SO:0001217,UniParc:UPI00000D0FFD,UniRef:UniRef100_I6Y4G1,UniRef:UniRef50_I6Y4G1,UniRef:UniRef90_I6Y4G1
contig_1	Pyrodigal	gene	796064	796660	.	-	.	ID=GCA000153685_00732_gene;locus_tag=GCA000153685_00732;gene=mftR
contig_1	Pyrodigal	CDS	796064	796660	.	-	0	ID=GCA000153685_00732;Name=mycofactocin system transcriptional regulator;locus_tag=GCA000153685_00732;product=mycofactocin system transcriptional regulator;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0036042;gene=mftR;Parent=GCA000153685_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403482.1,SO:0001217,UniParc:UPI00000D5E11,UniRef:UniRef100_P9WMB7,UniRef:UniRef50_P9WMB7,UniRef:UniRef90_P9WMB7
contig_1	Pyrodigal	gene	796751	796840	.	+	.	ID=GCA000153685_00733_gene;locus_tag=GCA000153685_00733;gene=mftA
contig_1	Pyrodigal	CDS	796751	796840	.	+	0	ID=GCA000153685_00733;Name=mycofactocin precursor MftA;locus_tag=GCA000153685_00733;product=mycofactocin precursor MftA;Dbxref=GO:0009055,GO:0140604;gene=mftA;Parent=GCA000153685_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24694,RefSeq:WP_003403483.1,SO:0001217,UniParc:UPI000169A3F1,UniRef:UniRef100_P9WJ81,UniRef:UniRef50_P9WJ81,UniRef:UniRef90_P9WJ81
contig_1	Pyrodigal	gene	796825	797154	.	+	.	ID=GCA000153685_00734_gene;locus_tag=GCA000153685_00734;gene=mftB
contig_1	Pyrodigal	CDS	796825	797154	.	+	0	ID=GCA000153685_00734;Name=mycofactocin biosynthesis chaperone MftB;locus_tag=GCA000153685_00734;product=mycofactocin biosynthesis chaperone MftB;Dbxref=GO:0140604;gene=mftB;Parent=GCA000153685_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24695,RefSeq:WP_003403486.1,SO:0001217,UniParc:UPI00000CCBE0,UniRef:UniRef100_P95038,UniRef:UniRef50_P95038,UniRef:UniRef90_P95038
contig_1	Pyrodigal	gene	797151	798326	.	+	.	ID=GCA000153685_00735_gene;locus_tag=GCA000153685_00735;gene=mftC
contig_1	Pyrodigal	CDS	797151	798326	.	+	0	ID=GCA000153685_00735;Name=mycofactocin radical SAM maturase;locus_tag=GCA000153685_00735;product=mycofactocin radical SAM maturase;Dbxref=GO:0005886,GO:0016491,GO:0016829,GO:0031179,GO:0046872,GO:0051539,GO:0140604;gene=mftC;Parent=GCA000153685_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24696,RefSeq:WP_003403490.1,SO:0001217,UniParc:UPI00000D5FEA,UniRef:UniRef100_P9WJ79,UniRef:UniRef50_A0QSB8,UniRef:UniRef90_P9WJ79;ec_number=4.1.99.26
contig_1	Pyrodigal	gene	798329	799519	.	+	.	ID=GCA000153685_00736_gene;locus_tag=GCA000153685_00736;gene=mftD
contig_1	Pyrodigal	CDS	798329	799519	.	+	0	ID=GCA000153685_00736;Name=pre-mycofactocin synthase MftD;locus_tag=GCA000153685_00736;product=pre-mycofactocin synthase MftD;Dbxref=GO:0010181,GO:0016491,GO:0140604;gene=mftD;Parent=GCA000153685_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_003898557.1,SO:0001217,UniParc:UPI00000C1586,UniRef:UniRef100_P9WND7,UniRef:UniRef50_A0QSB9,UniRef:UniRef90_A0PM50;ec_number=1.4.3.26
contig_1	Pyrodigal	gene	799799	800464	.	+	.	ID=GCA000153685_00737_gene;locus_tag=GCA000153685_00737;gene=mftE
contig_1	Pyrodigal	CDS	799799	800464	.	+	0	ID=GCA000153685_00737;Name=mycofactocin biosynthesis peptidyl-dipeptidase MftE;locus_tag=GCA000153685_00737;product=mycofactocin biosynthesis peptidyl-dipeptidase MftE;Dbxref=GO:0006508,GO:0008233,GO:0009231,GO:0016811,GO:0046872,GO:0140604;gene=mftE;Parent=GCA000153685_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24697,SO:0001217,UniParc:UPI00005EE433,UniRef:UniRef100_A0A0E8NPB7,UniRef:UniRef50_P9WP59,UniRef:UniRef90_P9WP59;ec_number=3.4.14.14
contig_1	Pyrodigal	gene	800513	801925	.	+	.	ID=GCA000153685_00738_gene;locus_tag=GCA000153685_00738;gene=mftF
contig_1	Pyrodigal	CDS	800513	801925	.	+	0	ID=GCA000153685_00738;Name=mycofactocin biosynthesis glycosyltransferase MftF;locus_tag=GCA000153685_00738;product=mycofactocin biosynthesis glycosyltransferase MftF;Dbxref=GO:0005829,GO:0005886,GO:0016740,GO:0016757,GO:0140604;gene=mftF;Parent=GCA000153685_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403501.1,SO:0001217,UniParc:UPI00000D5FF6,UniRef:UniRef100_P9WMX1,UniRef:UniRef50_P9WMX1,UniRef:UniRef90_P9WMX1;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	802008	803366	.	+	.	ID=GCA000153685_00739_gene;locus_tag=GCA000153685_00739;gene=mftG
contig_1	Pyrodigal	CDS	802008	803366	.	+	0	ID=GCA000153685_00739;Name=mycofactocin system GMC family oxidoreductase MftG;locus_tag=GCA000153685_00739;product=mycofactocin system GMC family oxidoreductase MftG;Dbxref=GO:0016614;gene=mftG;Parent=GCA000153685_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE435,UniRef:UniRef100_A5U083,UniRef:UniRef50_A0A3S4VNS7,UniRef:UniRef90_A0A8I0EL38;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	804258	805013	.	+	.	ID=GCA000153685_00740_gene;locus_tag=GCA000153685_00740
contig_1	Pyrodigal	CDS	804258	805013	.	+	0	ID=GCA000153685_00740;Name=hypothetical protein;locus_tag=GCA000153685_00740;product=hypothetical protein;Parent=GCA000153685_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E3857F,UniRef:UniRef100_A0A0E8U539,UniRef:UniRef50_A0A655IRN9,UniRef:UniRef90_A0A655IRN9
contig_1	Pyrodigal	gene	805481	805786	.	+	.	ID=GCA000153685_00741_gene;locus_tag=GCA000153685_00741;gene=rpsJ
contig_1	Pyrodigal	CDS	805481	805786	.	+	0	ID=GCA000153685_00741;Name=30S ribosomal protein S10;locus_tag=GCA000153685_00741;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ;Parent=GCA000153685_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_003403578.1,SO:0001217,UniParc:UPI0000134BB8,UniRef:UniRef100_B2HSN0,UniRef:UniRef50_Q2LQA2,UniRef:UniRef90_A0QSD0
contig_1	Pyrodigal	gene	805803	806456	.	+	.	ID=GCA000153685_00742_gene;locus_tag=GCA000153685_00742;gene=rplC
contig_1	Pyrodigal	CDS	805803	806456	.	+	0	ID=GCA000153685_00742;Name=50S ribosomal protein L3;locus_tag=GCA000153685_00742;product=50S ribosomal protein L3;Dbxref=GO:0003735,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000153685_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,RefSeq:WP_003403579.1,SO:0001217,UniParc:UPI000013409C,UniRef:UniRef100_P9WH87,UniRef:UniRef50_B7J467,UniRef:UniRef90_P9WH87
contig_1	Pyrodigal	gene	806456	807127	.	+	.	ID=GCA000153685_00743_gene;locus_tag=GCA000153685_00743;gene=rplD
contig_1	Pyrodigal	CDS	806456	807127	.	+	0	ID=GCA000153685_00743;Name=50S ribosomal protein L4;locus_tag=GCA000153685_00743;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000153685_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403580.1,SO:0001217,UniParc:UPI00001340FD,UniRef:UniRef100_P9WH85,UniRef:UniRef50_A0QSD2,UniRef:UniRef90_P9WH85
contig_1	Pyrodigal	gene	807127	807429	.	+	.	ID=GCA000153685_00744_gene;locus_tag=GCA000153685_00744;gene=rplW
contig_1	Pyrodigal	CDS	807127	807429	.	+	0	ID=GCA000153685_00744;Name=50S ribosomal protein L23;locus_tag=GCA000153685_00744;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA000153685_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_003403581.1,SO:0001217,UniParc:UPI0000133DA5,UniRef:UniRef100_P9WHB9,UniRef:UniRef50_P9WHB9,UniRef:UniRef90_P9WHB9
contig_1	Pyrodigal	gene	807630	808472	.	+	.	ID=GCA000153685_00745_gene;locus_tag=GCA000153685_00745;gene=rplB
contig_1	Pyrodigal	CDS	807630	808472	.	+	0	ID=GCA000153685_00745;Name=50S ribosomal protein L2;locus_tag=GCA000153685_00745;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000153685_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,KEGG:K02886,RefSeq:WP_003403582.1,SO:0001217,UniParc:UPI0000133ED0,UniRef:UniRef100_P9WHA5,UniRef:UniRef50_Q9RXJ9,UniRef:UniRef90_P9WHA5
contig_1	Pyrodigal	gene	808513	808794	.	+	.	ID=GCA000153685_00746_gene;locus_tag=GCA000153685_00746;gene=rpsS
contig_1	Pyrodigal	CDS	808513	808794	.	+	0	ID=GCA000153685_00746;Name=30S ribosomal protein S19;locus_tag=GCA000153685_00746;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000153685_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_003403584.1,SO:0001217,UniParc:UPI0000134DEE,UniRef:UniRef100_P9WH45,UniRef:UniRef50_P21476,UniRef:UniRef90_A0QSD5
contig_1	Pyrodigal	gene	808791	809384	.	+	.	ID=GCA000153685_00747_gene;locus_tag=GCA000153685_00747;gene=rplV
contig_1	Pyrodigal	CDS	808791	809384	.	+	0	ID=GCA000153685_00747;Name=50S ribosomal protein L22;locus_tag=GCA000153685_00747;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000153685_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02890,RefSeq:WP_003403587.1,SO:0001217,UniParc:UPI0000133D7C,UniRef:UniRef100_P9WHC1,UniRef:UniRef50_P9WHC1,UniRef:UniRef90_P9WHC1
contig_1	Pyrodigal	gene	809384	810208	.	+	.	ID=GCA000153685_00748_gene;locus_tag=GCA000153685_00748;gene=rpsC
contig_1	Pyrodigal	CDS	809384	810208	.	+	0	ID=GCA000153685_00748;Name=30S ribosomal protein S3;locus_tag=GCA000153685_00748;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000153685_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02982,RefSeq:WP_003403590.1,SO:0001217,UniParc:UPI0000164FA6,UniRef:UniRef100_P9WH37,UniRef:UniRef50_P9WH37,UniRef:UniRef90_P9WH37
contig_1	Pyrodigal	gene	810212	810628	.	+	.	ID=GCA000153685_00749_gene;locus_tag=GCA000153685_00749;gene=rplP
contig_1	Pyrodigal	CDS	810212	810628	.	+	0	ID=GCA000153685_00749;Name=50S ribosomal protein L16;locus_tag=GCA000153685_00749;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000153685_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,KEGG:K02878,RefSeq:WP_003403592.1,SO:0001217,UniParc:UPI0000133C3E,UniRef:UniRef100_P9WHD5,UniRef:UniRef50_Q9RXJ5,UniRef:UniRef90_P9WHD5
contig_1	Pyrodigal	gene	810628	810861	.	+	.	ID=GCA000153685_00750_gene;locus_tag=GCA000153685_00750;gene=rpmC
contig_1	Pyrodigal	CDS	810628	810861	.	+	0	ID=GCA000153685_00750;Name=50S ribosomal protein L29;locus_tag=GCA000153685_00750;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000153685_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403594.1,SO:0001217,UniParc:UPI0000133E7F,UniRef:UniRef100_P9WHA7,UniRef:UniRef50_P9WHA7,UniRef:UniRef90_P9WHA7
contig_1	Pyrodigal	gene	810861	811268	.	+	.	ID=GCA000153685_00751_gene;locus_tag=GCA000153685_00751;gene=rpsQ
contig_1	Pyrodigal	CDS	810861	811268	.	+	0	ID=GCA000153685_00751;Name=30S ribosomal protein S17;locus_tag=GCA000153685_00751;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000153685_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898560.1,SO:0001217,UniParc:UPI0000134D82,UniRef:UniRef100_P9WH51,UniRef:UniRef50_P9WH51,UniRef:UniRef90_P9WH51
contig_1	Pyrodigal	gene	811437	813800	.	+	.	ID=GCA000153685_00752_gene;locus_tag=GCA000153685_00752;gene=atsA
contig_1	Pyrodigal	CDS	811437	813800	.	+	0	ID=GCA000153685_00752;Name=arylsulfatase AtsA;locus_tag=GCA000153685_00752;product=arylsulfatase AtsA;gene=atsA;Parent=GCA000153685_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898561,RefSeq:WP_003898561.1,SO:0001217,UniParc:UPI00000CCBE1,UniRef:UniRef100_P95059,UniRef:UniRef50_A0A655HR04,UniRef:UniRef90_A0A655HR04
contig_1	Pyrodigal	gene	813848	814747	.	+	.	ID=GCA000153685_00753_gene;locus_tag=GCA000153685_00753
contig_1	Pyrodigal	CDS	813848	814747	.	+	0	ID=GCA000153685_00753;Name=Formylglycine-generating enzyme;locus_tag=GCA000153685_00753;product=Formylglycine-generating enzyme;Dbxref=GO:0043687,GO:0046872,GO:0120147;Parent=GCA000153685_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403610.1,SO:0001217,UniParc:UPI00000D1127,UniRef:UniRef100_I6Y8I5,UniRef:UniRef50_I6Y8I5,UniRef:UniRef90_I6Y8I5;ec_number=1.8.3.7
contig_1	Pyrodigal	gene	815129	815989	.	+	.	ID=GCA000153685_00754_gene;locus_tag=GCA000153685_00754
contig_1	Pyrodigal	CDS	815129	815989	.	+	0	ID=GCA000153685_00754;Name=Conserved transmembrane protein;locus_tag=GCA000153685_00754;product=Conserved transmembrane protein;Parent=GCA000153685_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE437,UniRef:UniRef100_A5U099,UniRef:UniRef50_Q73SA2,UniRef:UniRef90_A5U099
contig_1	Pyrodigal	gene	816475	816843	.	+	.	ID=GCA000153685_00755_gene;locus_tag=GCA000153685_00755;gene=rplN
contig_1	Pyrodigal	CDS	816475	816843	.	+	0	ID=GCA000153685_00755;Name=50S ribosomal protein L14;locus_tag=GCA000153685_00755;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000153685_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,KEGG:K02874,RefSeq:WP_003403649.1,SO:0001217,UniParc:UPI0000133BEA,UniRef:UniRef100_P9WHD9,UniRef:UniRef50_Q5SHP8,UniRef:UniRef90_P9WHD9
contig_1	Pyrodigal	gene	816844	817161	.	+	.	ID=GCA000153685_00756_gene;locus_tag=GCA000153685_00756;gene=rplX
contig_1	Pyrodigal	CDS	816844	817161	.	+	0	ID=GCA000153685_00756;Name=50S ribosomal protein L24;locus_tag=GCA000153685_00756;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplX;Parent=GCA000153685_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_003403654.1,SO:0001217,UniParc:UPI0000133DCE,UniRef:UniRef100_P9WHB7,UniRef:UniRef50_P9WHB7,UniRef:UniRef90_P9WHB7
contig_1	Pyrodigal	gene	817161	817724	.	+	.	ID=GCA000153685_00757_gene;locus_tag=GCA000153685_00757;gene=rplE
contig_1	Pyrodigal	CDS	817161	817724	.	+	0	ID=GCA000153685_00757;Name=50S ribosomal protein L5;locus_tag=GCA000153685_00757;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000153685_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_003403660.1,SO:0001217,UniParc:UPI0000134133,UniRef:UniRef100_P9WH83,UniRef:UniRef50_P9WH83,UniRef:UniRef90_P9WH83
contig_1	Pyrodigal	gene	817729	817914	.	+	.	ID=GCA000153685_00758_gene;locus_tag=GCA000153685_00758;gene=rpsZ
contig_1	Pyrodigal	CDS	817729	817914	.	+	0	ID=GCA000153685_00758;Name=type Z 30S ribosomal protein S14;locus_tag=GCA000153685_00758;product=type Z 30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0008270,GO:0015935,GO:0019843;gene=rpsZ;Parent=GCA000153685_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02954,RefSeq:WP_003403667.1,SO:0001217,UniParc:UPI0000132EEC,UniRef:UniRef100_P9WH57,UniRef:UniRef50_P12878,UniRef:UniRef90_P9WH57
contig_1	Pyrodigal	gene	818078	818476	.	+	.	ID=GCA000153685_00759_gene;locus_tag=GCA000153685_00759;gene=rpsH
contig_1	Pyrodigal	CDS	818078	818476	.	+	0	ID=GCA000153685_00759;Name=30S ribosomal protein S8;locus_tag=GCA000153685_00759;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA000153685_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_003403669.1,SO:0001217,UniParc:UPI0000135171,UniRef:UniRef100_P9WH27,UniRef:UniRef50_A0QSG3,UniRef:UniRef90_A0QSG3
contig_1	Pyrodigal	gene	818500	819039	.	+	.	ID=GCA000153685_00760_gene;locus_tag=GCA000153685_00760;gene=rplF
contig_1	Pyrodigal	CDS	818500	819039	.	+	0	ID=GCA000153685_00760;Name=50S ribosomal protein L6;locus_tag=GCA000153685_00760;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000153685_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_003403673.1,SO:0001217,UniParc:UPI0000134165,UniRef:UniRef100_P9WH81,UniRef:UniRef50_P9WH81,UniRef:UniRef90_P9WH81
contig_1	Pyrodigal	gene	819042	819410	.	+	.	ID=GCA000153685_00761_gene;locus_tag=GCA000153685_00761;gene=rplR
contig_1	Pyrodigal	CDS	819042	819410	.	+	0	ID=GCA000153685_00761;Name=50S ribosomal protein L18;locus_tag=GCA000153685_00761;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000153685_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403677.1,SO:0001217,UniParc:UPI0000133C80,UniRef:UniRef100_P9WHD1,UniRef:UniRef50_Q4JT85,UniRef:UniRef90_P9WHD1
contig_1	Pyrodigal	gene	819430	820092	.	+	.	ID=GCA000153685_00762_gene;locus_tag=GCA000153685_00762;gene=rpsE
contig_1	Pyrodigal	CDS	819430	820092	.	+	0	ID=GCA000153685_00762;Name=30S ribosomal protein S5;locus_tag=GCA000153685_00762;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000153685_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403680.1,SO:0001217,UniParc:UPI0000135063,UniRef:UniRef100_P9WH33,UniRef:UniRef50_P9WH33,UniRef:UniRef90_P9WH33
contig_1	Pyrodigal	gene	820095	820292	.	+	.	ID=GCA000153685_00763_gene;locus_tag=GCA000153685_00763;gene=rpmD
contig_1	Pyrodigal	CDS	820095	820292	.	+	0	ID=GCA000153685_00763;Name=50S ribosomal protein L30;locus_tag=GCA000153685_00763;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000153685_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403683.1,SO:0001217,UniParc:UPI0000133EF2,UniRef:UniRef100_P9WHA3,UniRef:UniRef50_P9WHA3,UniRef:UniRef90_P9WHA3
contig_1	Pyrodigal	gene	820292	820732	.	+	.	ID=GCA000153685_00764_gene;locus_tag=GCA000153685_00764;gene=rplO
contig_1	Pyrodigal	CDS	820292	820732	.	+	0	ID=GCA000153685_00764;Name=50S ribosomal protein L15;locus_tag=GCA000153685_00764;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000153685_00764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02876,RefSeq:WP_003898563.1,SO:0001217,UniParc:UPI0000133C18,UniRef:UniRef100_P9WHD7,UniRef:UniRef50_P9WHD7,UniRef:UniRef90_P9WHD7
contig_1	Pyrodigal	gene	820765	822636	.	+	.	ID=GCA000153685_00765_gene;locus_tag=GCA000153685_00765;gene=sppA
contig_1	Pyrodigal	CDS	820765	822636	.	+	0	ID=GCA000153685_00765;Name=signal peptide peptidase SppA;locus_tag=GCA000153685_00765;product=signal peptide peptidase SppA;Dbxref=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gene=sppA;Parent=GCA000153685_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04773,RefSeq:WP_003898564.1,SO:0001217,UniParc:UPI00000D5019,UniRef:UniRef100_P95072,UniRef:UniRef50_X8CBE5,UniRef:UniRef90_P95072;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	822641	823546	.	-	.	ID=GCA000153685_00766_gene;locus_tag=GCA000153685_00766
contig_1	Pyrodigal	CDS	822641	823546	.	-	0	ID=GCA000153685_00766;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0746c;locus_tag=GCA000153685_00766;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0746c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403687.1,SO:0001217,UniParc:UPI00000C14B7,UniRef:UniRef100_A5U0B1,UniRef:UniRef50_A5U0B1,UniRef:UniRef90_A5U0B1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	823639	824742	.	-	.	ID=GCA000153685_00767_gene;locus_tag=GCA000153685_00767
contig_1	Pyrodigal	CDS	823639	824742	.	-	0	ID=GCA000153685_00767;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0747c;locus_tag=GCA000153685_00767;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0747c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403691.1,SO:0001217,UniParc:UPI00000D101C,UniRef:UniRef100_P9WFI7,UniRef:UniRef50_P9WFI7,UniRef:UniRef90_P9WFI7;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	824945	825601	.	-	.	ID=GCA000153685_00768_gene;locus_tag=GCA000153685_00768
contig_1	Pyrodigal	CDS	824945	825601	.	-	0	ID=GCA000153685_00768;Name=L-fuculose-phosphate aldolase;locus_tag=GCA000153685_00768;product=L-fuculose-phosphate aldolase;Parent=GCA000153685_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403695.1,SO:0001217,UniParc:UPI0000164FA9,UniRef:UniRef100_A0A1R3XWB0,UniRef:UniRef50_A0A2S8BSR4,UniRef:UniRef90_R4MAP8
contig_1	Pyrodigal	gene	825598	826554	.	-	.	ID=GCA000153685_00769_gene;locus_tag=GCA000153685_00769;gene=serA
contig_1	Pyrodigal	CDS	825598	826554	.	-	0	ID=GCA000153685_00769;Name=D-3-phosphoglycerate dehydrogenase SerA;locus_tag=GCA000153685_00769;product=D-3-phosphoglycerate dehydrogenase SerA;gene=serA;Parent=GCA000153685_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898565,SO:0001217,UniParc:UPI00005EE43A,UniRef:UniRef100_A0A0E8IXF0,UniRef:UniRef50_A0A0E8IXF0,UniRef:UniRef90_A0A0E8IXF0
contig_1	Pyrodigal	gene	826609	827955	.	+	.	ID=GCA000153685_00770_gene;locus_tag=GCA000153685_00770
contig_1	Pyrodigal	CDS	826609	827955	.	+	0	ID=GCA000153685_00770;Name=D-xylulose kinase;locus_tag=GCA000153685_00770;product=D-xylulose kinase;Parent=GCA000153685_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900204.1,SO:0001217,UniParc:UPI00000D5EA6,UniRef:UniRef100_I6Y4K0,UniRef:UniRef50_A0A655F939,UniRef:UniRef90_A0A655F939
contig_1	Pyrodigal	gene	827968	828696	.	+	.	ID=GCA000153685_00771_gene;locus_tag=GCA000153685_00771
contig_1	Pyrodigal	CDS	827968	828696	.	+	0	ID=GCA000153685_00771;Name=Gcn5-related N-acetyltransferase;locus_tag=GCA000153685_00771;product=Gcn5-related N-acetyltransferase;Parent=GCA000153685_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403710.1,SO:0001217,UniParc:UPI00000D1139,UniRef:UniRef100_I6XW38,UniRef:UniRef50_Q7AQ21,UniRef:UniRef90_A0A654TIY6
contig_1	Pyrodigal	gene	828785	829741	.	-	.	ID=GCA000153685_00772_gene;locus_tag=GCA000153685_00772
contig_1	Pyrodigal	CDS	828785	829741	.	-	0	ID=GCA000153685_00772;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0752c;locus_tag=GCA000153685_00772;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0752c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403717.1,SO:0001217,UniParc:UPI00000D11CA,UniRef:UniRef100_P9WFI5,UniRef:UniRef50_P9WFI7,UniRef:UniRef90_P9WFI5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	829902	831227	.	+	.	ID=GCA000153685_00773_gene;locus_tag=GCA000153685_00773;gene=secY
contig_1	Pyrodigal	CDS	829902	831227	.	+	0	ID=GCA000153685_00773;Name=preprotein translocase subunit SecY;locus_tag=GCA000153685_00773;product=preprotein translocase subunit SecY;Dbxref=GO:0005048,GO:0005576,GO:0005886,GO:0006616,GO:0008320,GO:0015031,GO:0016020,GO:0031522,GO:0043952;gene=secY;Parent=GCA000153685_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_003403723.1,SO:0001217,UniParc:UPI00001357E8,UniRef:UniRef100_P9WGN3,UniRef:UniRef50_P9WGN3,UniRef:UniRef90_P9WGN3
contig_1	Pyrodigal	gene	831224	831769	.	+	.	ID=GCA000153685_00774_gene;locus_tag=GCA000153685_00774;gene=adk
contig_1	Pyrodigal	CDS	831224	831769	.	+	0	ID=GCA000153685_00774;Name=adenylate kinase;locus_tag=GCA000153685_00774;product=adenylate kinase;Dbxref=GO:0004017,GO:0004550,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006144,GO:0009123,GO:0009132,GO:0009141,GO:0009274,GO:0019205,GO:0044209;gene=adk;Parent=GCA000153685_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403726.1,SO:0001217,UniParc:UPI000012DBD2,UniRef:UniRef100_P9WKF5,UniRef:UniRef50_P9WKF5,UniRef:UniRef90_P9WKF5;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	831772	832572	.	+	.	ID=GCA000153685_00775_gene;locus_tag=GCA000153685_00775;gene=map
contig_1	Pyrodigal	CDS	831772	832572	.	+	0	ID=GCA000153685_00775;Name=type I methionyl aminopeptidase;locus_tag=GCA000153685_00775;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0005506,GO:0005829,GO:0005886,GO:0006508,GO:0016485,GO:0070006;gene=map;Parent=GCA000153685_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01265,RefSeq:WP_003403728.1,SO:0001217,UniParc:UPI00000D10DE,UniRef:UniRef100_P9WK21,UniRef:UniRef50_P9WK21,UniRef:UniRef90_P9WK21;ec_number=3.4.11.18
contig_1	Pyrodigal	gene	832645	833178	.	+	.	ID=GCA000153685_00776_gene;locus_tag=GCA000153685_00776;gene=sigL
contig_1	Pyrodigal	CDS	832645	833178	.	+	0	ID=GCA000153685_00776;Name=sigma-70 family RNA polymerase sigma factor SigL;locus_tag=GCA000153685_00776;product=sigma-70 family RNA polymerase sigma factor SigL;Dbxref=GO:0003677,GO:0006352,GO:0006355,GO:0016987;gene=sigL;Parent=GCA000153685_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403731,RefSeq:WP_003403731.1,SO:0001217,UniParc:UPI00000D10AF,UniRef:UniRef100_P9WGH5,UniRef:UniRef50_P9WGH5,UniRef:UniRef90_P9WGH5
contig_1	Pyrodigal	gene	833242	833994	.	+	.	ID=GCA000153685_00777_gene;locus_tag=GCA000153685_00777;gene=rslA
contig_1	Pyrodigal	CDS	833242	833994	.	+	0	ID=GCA000153685_00777;Name=anti-sigma-L factor RslA;locus_tag=GCA000153685_00777;product=anti-sigma-L factor RslA;Dbxref=GO:0005886,GO:0008270,GO:0016989;gene=rslA;Parent=GCA000153685_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403733,RefSeq:WP_003403733.1,SO:0001217,UniParc:UPI00000D1178,UniRef:UniRef100_P9WJ67,UniRef:UniRef50_P9WJ67,UniRef:UniRef90_P9WJ67
contig_1	Pyrodigal	gene	834237	834806	.	+	.	ID=GCA000153685_00778_gene;locus_tag=GCA000153685_00778
contig_1	Pyrodigal	CDS	834237	834806	.	+	0	ID=GCA000153685_00778;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_00778;product=putative transcriptional regulatory protein;Parent=GCA000153685_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C597A8,UniRef:UniRef100_A0A0E8UGT5,UniRef:UniRef50_Q73S64,UniRef:UniRef90_I6Y8K3
contig_1	Pyrodigal	gene	835176	835712	.	+	.	ID=GCA000153685_00779_gene;locus_tag=GCA000153685_00779
contig_1	Pyrodigal	CDS	835176	835712	.	+	0	ID=GCA000153685_00779;Name=putative protein Rv0738;locus_tag=GCA000153685_00779;product=putative protein Rv0738;Dbxref=GO:0046872;Parent=GCA000153685_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61DDD,UniRef:UniRef100_P9WKS3,UniRef:UniRef50_P9WKS3,UniRef:UniRef90_P9WKS3
contig_1	Pyrodigal	gene	835960	836763	.	+	.	ID=GCA000153685_00780_gene;locus_tag=GCA000153685_00780
contig_1	Pyrodigal	CDS	835960	836763	.	+	0	ID=GCA000153685_00780;Name=putative protein Rv0739;locus_tag=GCA000153685_00780;product=putative protein Rv0739;Dbxref=GO:0005886;Parent=GCA000153685_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE43E,UniRef:UniRef100_A0A0E8U0Y6,UniRef:UniRef50_P9WKS1,UniRef:UniRef90_P9WKS1
contig_1	Pyrodigal	gene	836797	837405	.	+	.	ID=GCA000153685_00781_gene;locus_tag=GCA000153685_00781
contig_1	Pyrodigal	CDS	836797	837405	.	+	0	ID=GCA000153685_00781;Name=Protein Rv0740;locus_tag=GCA000153685_00781;product=Protein Rv0740;Parent=GCA000153685_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE43F,UniRef:UniRef100_O53803,UniRef:UniRef50_O53803,UniRef:UniRef90_O53803
contig_1	Pyrodigal	gene	837636	837950	.	+	.	ID=GCA000153685_00782_gene;locus_tag=GCA000153685_00782
contig_1	Pyrodigal	CDS	837636	837950	.	+	0	ID=GCA000153685_00782;Name=Transposase;locus_tag=GCA000153685_00782;product=Transposase;Parent=GCA000153685_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001277FD7,UniRef:UniRef100_A0A0H3L757,UniRef:UniRef50_A0A0H3L757,UniRef:UniRef90_A5U0C8
contig_1	Pyrodigal	gene	838092	838610	.	+	.	ID=GCA000153685_00783_gene;locus_tag=GCA000153685_00783;gene=pE_PGRS8
contig_1	Pyrodigal	CDS	838092	838610	.	+	0	ID=GCA000153685_00783;Name=PE-PGRS family protein PE_PGRS8;locus_tag=GCA000153685_00783;product=PE-PGRS family protein PE_PGRS8;Dbxref=GO:0005576,GO:0009986;gene=pE_PGRS8;Parent=GCA000153685_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BA1,UniRef:UniRef100_A0A1R3XYE7,UniRef:UniRef50_I6Y8K5,UniRef:UniRef90_I6Y8K5
contig_1	Pyrodigal	gene	838988	839545	.	-	.	ID=GCA000153685_00784_gene;locus_tag=GCA000153685_00784
contig_1	Pyrodigal	CDS	838988	839545	.	-	0	ID=GCA000153685_00784;Name=DUF6036 domain-containing protein;locus_tag=GCA000153685_00784;product=DUF6036 domain-containing protein;Parent=GCA000153685_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403820.1,SO:0001217,UniParc:UPI00000D1179,UniRef:UniRef100_I6WZ83,UniRef:UniRef50_I6WZ83,UniRef:UniRef90_I6WZ83
contig_1	Pyrodigal	gene	839542	840048	.	-	.	ID=GCA000153685_00785_gene;locus_tag=GCA000153685_00785
contig_1	Pyrodigal	CDS	839542	840048	.	-	0	ID=GCA000153685_00785;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_00785;product=putative transcriptional regulatory protein;Parent=GCA000153685_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403827.1,SO:0001217,UniParc:UPI0000165249,UniRef:UniRef100_O53807,UniRef:UniRef50_O53807,UniRef:UniRef90_O53807
contig_1	Pyrodigal	gene	840161	840307	.	-	.	ID=GCA000153685_00786_gene;locus_tag=GCA000153685_00786
contig_1	Pyrodigal	CDS	840161	840307	.	-	0	ID=GCA000153685_00786;Name=3-hydroxyisobutyrate dehydrogenase;locus_tag=GCA000153685_00786;product=3-hydroxyisobutyrate dehydrogenase;Parent=GCA000153685_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BA3,UniRef:UniRef100_A0A0H3LAI9,UniRef:UniRef50_A0A2I7W4G4,UniRef:UniRef90_A0A0H3LAI9
contig_1	Pyrodigal	gene	840803	843154	.	+	.	ID=GCA000153685_00787_gene;locus_tag=GCA000153685_00787
contig_1	Pyrodigal	CDS	840803	843154	.	+	0	ID=GCA000153685_00787;Name=PE-PGRS family protein PE_PGRS9;locus_tag=GCA000153685_00787;product=PE-PGRS family protein PE_PGRS9;Parent=GCA000153685_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054159.1,SO:0001217,UniParc:UPI0000F51803,UniRef:UniRef100_A5U0D2,UniRef:UniRef50_Q79FW8,UniRef:UniRef90_Q79FW8
contig_1	Pyrodigal	gene	843553	845778	.	+	.	ID=GCA000153685_00788_gene;locus_tag=GCA000153685_00788
contig_1	Pyrodigal	CDS	843553	845778	.	+	0	ID=GCA000153685_00788;Name=PE family protein;locus_tag=GCA000153685_00788;product=PE family protein;Parent=GCA000153685_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345039.1,SO:0001217,UniParc:UPI0002A85A63,UniRef:UniRef100_UPI0002A85A63,UniRef:UniRef50_P9WIG1,UniRef:UniRef90_UPI0002A85A63
contig_1	Pyrodigal	gene	845869	846126	.	+	.	ID=GCA000153685_00789_gene;locus_tag=GCA000153685_00789;gene=vapB31
contig_1	Pyrodigal	CDS	845869	846126	.	+	0	ID=GCA000153685_00789;Name=Antitoxin VapB31;locus_tag=GCA000153685_00789;product=Antitoxin VapB31;Dbxref=GO:0006355,GO:0045927;gene=vapB31;Parent=GCA000153685_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403834.1,SO:0001217,UniParc:UPI000016524A,UniRef:UniRef100_O53811,UniRef:UniRef50_O53811,UniRef:UniRef90_O53811
contig_1	Pyrodigal	gene	846150	846578	.	+	.	ID=GCA000153685_00790_gene;locus_tag=GCA000153685_00790;gene=vapC31
contig_1	Pyrodigal	CDS	846150	846578	.	+	0	ID=GCA000153685_00790;Name=Ribonuclease VapC31;locus_tag=GCA000153685_00790;product=Ribonuclease VapC31;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC31;Parent=GCA000153685_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403837.1,SO:0001217,UniParc:UPI00000D114B,UniRef:UniRef100_P9WF75,UniRef:UniRef50_P9WF75,UniRef:UniRef90_P9WF75;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	846659	846796	.	-	.	ID=GCA000153685_00791_gene;locus_tag=GCA000153685_00791
contig_1	Pyrodigal	CDS	846659	846796	.	-	0	ID=GCA000153685_00791;Name=Transposase;locus_tag=GCA000153685_00791;product=Transposase;Parent=GCA000153685_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403839.1,SO:0001217,UniParc:UPI00000D2BA5,UniRef:UniRef100_I6X9Q1,UniRef:UniRef50_I6X9Q1,UniRef:UniRef90_I6X9Q1
contig_1	Pyrodigal	gene	846931	847200	.	+	.	ID=GCA000153685_00792_gene;locus_tag=GCA000153685_00792
contig_1	Pyrodigal	CDS	846931	847200	.	+	0	ID=GCA000153685_00792;Name=hypothetical protein;locus_tag=GCA000153685_00792;product=hypothetical protein;Parent=GCA000153685_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB9A,UniRef:UniRef100_A5U0D7,UniRef:UniRef50_O53813,UniRef:UniRef90_O53813
contig_1	Pyrodigal	gene	847269	848153	.	-	.	ID=GCA000153685_00793_gene;locus_tag=GCA000153685_00793;gene=mmsB
contig_1	Pyrodigal	CDS	847269	848153	.	-	0	ID=GCA000153685_00793;Name=3-hydroxyisobutyrate dehydrogenase;locus_tag=GCA000153685_00793;product=3-hydroxyisobutyrate dehydrogenase;Dbxref=GO:0006574,GO:0008442,GO:0016616,GO:0050661,GO:0051287;gene=mmsB;Parent=GCA000153685_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403844.1,SO:0001217,UniParc:UPI000012F295,UniRef:UniRef100_P9WNY5,UniRef:UniRef50_P9WNY5,UniRef:UniRef90_P9WNY5;ec_number=1.1.1.31
contig_1	Pyrodigal	gene	848164	849336	.	-	.	ID=GCA000153685_00794_gene;locus_tag=GCA000153685_00794
contig_1	Pyrodigal	CDS	848164	849336	.	-	0	ID=GCA000153685_00794;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_00794;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403845.1,SO:0001217,UniParc:UPI00000D0FFB,UniRef:UniRef100_A5U0D9,UniRef:UniRef50_A0A378W5R4,UniRef:UniRef90_A0A655IJ50
contig_1	Pyrodigal	gene	849343	850875	.	-	.	ID=GCA000153685_00795_gene;locus_tag=GCA000153685_00795
contig_1	Pyrodigal	CDS	849343	850875	.	-	0	ID=GCA000153685_00795;Name=methylmalonate-semialdehyde dehydrogenase (CoA acylating);locus_tag=GCA000153685_00795;product=methylmalonate-semialdehyde dehydrogenase (CoA acylating);Parent=GCA000153685_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403847.1,SO:0001217,UniParc:UPI00000D4FCB,UniRef:UniRef100_O53816,UniRef:UniRef50_O53816,UniRef:UniRef90_O53816
contig_1	Pyrodigal	gene	851081	852835	.	+	.	ID=GCA000153685_00796_gene;locus_tag=GCA000153685_00796;gene=pE_PGRS11
contig_1	Pyrodigal	CDS	851081	852835	.	+	0	ID=GCA000153685_00796;Name=phosphoglycerate mutase PE_PGRS11;locus_tag=GCA000153685_00796;product=phosphoglycerate mutase PE_PGRS11;Dbxref=GO:0000287,GO:0001666,GO:0004619,GO:0005576,GO:0005737,GO:0006096,GO:0009274,GO:0009986,GO:0016791,GO:0046537;gene=pE_PGRS11;Parent=GCA000153685_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003403850,RefSeq:WP_003403850.1,SO:0001217,UniParc:UPI00000D4FCC,UniRef:UniRef100_Q79FW5,UniRef:UniRef50_Q79FW5,UniRef:UniRef90_Q79FW5;ec_number=5.4.2.12
contig_1	Pyrodigal	gene	853025	854962	.	-	.	ID=GCA000153685_00797_gene;locus_tag=GCA000153685_00797;gene=pPE12
contig_1	Pyrodigal	CDS	853025	854962	.	-	0	ID=GCA000153685_00797;Name=putative PPE family protein PPE12;locus_tag=GCA000153685_00797;product=putative PPE family protein PPE12;Dbxref=GO:0052572;gene=pPE12;Parent=GCA000153685_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898574.1,SO:0001217,UniParc:UPI000016524C,UniRef:UniRef100_P9WI37,UniRef:UniRef50_P9WI37,UniRef:UniRef90_P9WI37
contig_1	Pyrodigal	gene	855264	855434	.	-	.	ID=GCA000153685_00798_gene;locus_tag=GCA000153685_00798
contig_1	Pyrodigal	CDS	855264	855434	.	-	0	ID=GCA000153685_00798;Name=Transposase;locus_tag=GCA000153685_00798;product=Transposase;Parent=GCA000153685_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6BAE,UniRef:UniRef100_A0A0H3L7A4,UniRef:UniRef50_A0A0H3L7A4,UniRef:UniRef90_A0A0H3L7A4
contig_1	tRNAscan-SE	gene	855564	855635	.	-	.	ID=GCA000153685_00799_gene;locus_tag=GCA000153685_00799;gene=trnT
contig_1	tRNAscan-SE	tRNA	855564	855635	.	-	.	ID=GCA000153685_00799;Name=tRNA-Thr(tgt);locus_tag=GCA000153685_00799;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000153685_00799_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Pyrodigal	gene	855663	856388	.	-	.	ID=GCA000153685_00800_gene;locus_tag=GCA000153685_00800
contig_1	Pyrodigal	CDS	855663	856388	.	-	0	ID=GCA000153685_00800;Name=ABC transporter;locus_tag=GCA000153685_00800;product=ABC transporter;Parent=GCA000153685_00800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403862.1,SO:0001217,UniParc:UPI00000D46FB,UniRef:UniRef100_P71813,UniRef:UniRef50_P71813,UniRef:UniRef90_P71813
contig_1	Pyrodigal	gene	856551	857273	.	+	.	ID=GCA000153685_00801_gene;locus_tag=GCA000153685_00801;gene=phoP
contig_1	Pyrodigal	CDS	856551	857273	.	+	0	ID=GCA000153685_00801;Name=two-component system response regulator PhoP;locus_tag=GCA000153685_00801;product=two-component system response regulator PhoP;gene=phoP;Parent=GCA000153685_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001065226,BlastRules:WP_003229442,BlastRules:WP_003403867,COG:COG0745,COG:TK,RefSeq:WP_003915456.1,SO:0001217,UniParc:UPI0000164FAE,UniRef:UniRef100_Q7D9B8,UniRef:UniRef50_P71814,UniRef:UniRef90_P71814
contig_1	Pyrodigal	gene	857318	858775	.	+	.	ID=GCA000153685_00802_gene;locus_tag=GCA000153685_00802;gene=phoR
contig_1	Pyrodigal	CDS	857318	858775	.	+	0	ID=GCA000153685_00802;Name=sensory box histidine kinase PhoR;locus_tag=GCA000153685_00802;product=sensory box histidine kinase PhoR;gene=phoR;Parent=GCA000153685_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001032128,BlastRules:WP_003916717,BlastRules:WP_004398493,RefSeq:WP_003898576.1,SO:0001217,UniParc:UPI0000164FAF,UniRef:UniRef100_A0A0H3L6M8,UniRef:UniRef50_A0A378THA5,UniRef:UniRef90_P71815;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	858747	859148	.	-	.	ID=GCA000153685_00803_gene;locus_tag=GCA000153685_00803
contig_1	Pyrodigal	CDS	858747	859148	.	-	0	ID=GCA000153685_00803;Name=putative HIT-like protein Rv0759c;locus_tag=GCA000153685_00803;product=putative HIT-like protein Rv0759c;Dbxref=GO:0005737,GO:0016787;Parent=GCA000153685_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403876.1,SO:0001217,UniParc:UPI000013B262,UniRef:UniRef100_P9WML3,UniRef:UniRef50_P9WML3,UniRef:UniRef90_P9WML3
contig_1	Pyrodigal	gene	859188	859607	.	-	.	ID=GCA000153685_00804_gene;locus_tag=GCA000153685_00804
contig_1	Pyrodigal	CDS	859188	859607	.	-	0	ID=GCA000153685_00804;Name=Steroid Delta-isomerase;locus_tag=GCA000153685_00804;product=Steroid Delta-isomerase;Parent=GCA000153685_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01822,RefSeq:WP_003403880.1,SO:0001217,UniParc:UPI00000D1220,UniRef:UniRef100_I6WZD7,UniRef:UniRef50_A0AAI8SJ20,UniRef:UniRef90_A0A2I7W4I4;ec_number=5.3.3.1
contig_1	Pyrodigal	gene	859620	860747	.	-	.	ID=GCA000153685_00805_gene;locus_tag=GCA000153685_00805;gene=adhB
contig_1	Pyrodigal	CDS	859620	860747	.	-	0	ID=GCA000153685_00805;Name=Alcohol dehydrogenase B;locus_tag=GCA000153685_00805;product=Alcohol dehydrogenase B;Dbxref=GO:0004022,GO:0005829,GO:0005886,GO:0008270,GO:0046294,GO:0051903;gene=adhB;Parent=GCA000153685_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1062,RefSeq:WP_003403885.1,SO:0001217,UniParc:UPI00000D504A,UniRef:UniRef100_P9WQC7,UniRef:UniRef50_P9WQC7,UniRef:UniRef90_P9WQC7;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	860846	861391	.	-	.	ID=GCA000153685_00806_gene;locus_tag=GCA000153685_00806
contig_1	Pyrodigal	CDS	860846	861391	.	-	0	ID=GCA000153685_00806;Name=Nuclear transport factor 2 family protein;locus_tag=GCA000153685_00806;product=Nuclear transport factor 2 family protein;Parent=GCA000153685_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403887.1,SO:0001217,UniParc:UPI00000D11FA,UniRef:UniRef100_I6XW93,UniRef:UniRef50_A0A1I6RFN7,UniRef:UniRef90_I6XW93
contig_1	Pyrodigal	gene	861394	861600	.	-	.	ID=GCA000153685_00807_gene;locus_tag=GCA000153685_00807;gene=fdx
contig_1	Pyrodigal	CDS	861394	861600	.	-	0	ID=GCA000153685_00807;Name=Ferredoxin Fdx;locus_tag=GCA000153685_00807;product=Ferredoxin Fdx;Dbxref=GO:0046872,GO:0051538;gene=fdx;Parent=GCA000153685_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403890.1,SO:0001217,UniParc:UPI000016524E,UniRef:UniRef100_P71820,UniRef:UniRef50_P71820,UniRef:UniRef90_P71820
contig_1	Pyrodigal	gene	861603	862958	.	-	.	ID=GCA000153685_00808_gene;locus_tag=GCA000153685_00808;gene=cyp51
contig_1	Pyrodigal	CDS	861603	862958	.	-	0	ID=GCA000153685_00808;Name=lanosterol 14-alpha demethylase;locus_tag=GCA000153685_00808;product=lanosterol 14-alpha demethylase;Dbxref=GO:0005506,GO:0005829,GO:0008398,GO:0016125,GO:0016126,GO:0016491,GO:0020037;gene=cyp51;Parent=GCA000153685_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898577,RefSeq:WP_003898577.1,SO:0001217,UniParc:UPI00001281EB,UniRef:UniRef100_P9WPP9,UniRef:UniRef50_P9WPP9,UniRef:UniRef90_P9WPP9;ec_number=1.14.15.36
contig_1	Pyrodigal	gene	862958	863785	.	-	.	ID=GCA000153685_00809_gene;locus_tag=GCA000153685_00809
contig_1	Pyrodigal	CDS	862958	863785	.	-	0	ID=GCA000153685_00809;Name=SDR family oxidoreductase;locus_tag=GCA000153685_00809;product=SDR family oxidoreductase;Parent=GCA000153685_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898578.1,SO:0001217,UniParc:UPI00000D1239,UniRef:UniRef100_A5U0F3,UniRef:UniRef50_A0A1T8UZJ7,UniRef:UniRef90_A0A0T7LAA9
contig_1	Pyrodigal	gene	863785	864993	.	-	.	ID=GCA000153685_00810_gene;locus_tag=GCA000153685_00810;gene=cyp123
contig_1	Pyrodigal	CDS	863785	864993	.	-	0	ID=GCA000153685_00810;Name=Putative cytochrome P450 123;locus_tag=GCA000153685_00810;product=Putative cytochrome P450 123;Dbxref=GO:0004497,GO:0005506,GO:0005886,GO:0016705,GO:0020037;gene=cyp123;Parent=GCA000153685_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403911.1,SO:0001217,UniParc:UPI0000126BAB,UniRef:UniRef100_P9WPP5,UniRef:UniRef50_P9WPP5,UniRef:UniRef90_P9WPP5;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	864990	865631	.	-	.	ID=GCA000153685_00811_gene;locus_tag=GCA000153685_00811
contig_1	Pyrodigal	CDS	864990	865631	.	-	0	ID=GCA000153685_00811;Name=putative HTH-type transcriptional regulator Mb0790c;locus_tag=GCA000153685_00811;product=putative HTH-type transcriptional regulator Mb0790c;Dbxref=GO:0000976,GO:0003700;Parent=GCA000153685_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403915.1,SO:0001217,UniParc:UPI0000139C9C,UniRef:UniRef100_P9WMD7,UniRef:UniRef50_P9WMD7,UniRef:UniRef90_P9WMD7
contig_1	Pyrodigal	gene	865833	867302	.	+	.	ID=GCA000153685_00812_gene;locus_tag=GCA000153685_00812
contig_1	Pyrodigal	CDS	865833	867302	.	+	0	ID=GCA000153685_00812;Name=Aldehyde dehydrogenase NAD-dependent;locus_tag=GCA000153685_00812;product=Aldehyde dehydrogenase NAD-dependent;Parent=GCA000153685_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403919.1,SO:0001217,UniParc:UPI00000D11FE,UniRef:UniRef100_A5U0F6,UniRef:UniRef50_A0A4R8RBR3,UniRef:UniRef90_A0A654T3S7
contig_1	Pyrodigal	gene	867333	868079	.	+	.	ID=GCA000153685_00813_gene;locus_tag=GCA000153685_00813
contig_1	Pyrodigal	CDS	867333	868079	.	+	0	ID=GCA000153685_00813;Name=SDR family oxidoreductase;locus_tag=GCA000153685_00813;product=SDR family oxidoreductase;Dbxref=GO:0005886,GO:0016616,GO:0030497;Parent=GCA000153685_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898579.1,SO:0001217,UniParc:UPI00000D11FF,UniRef:UniRef100_P9WGQ9,UniRef:UniRef50_P9WGQ9,UniRef:UniRef90_P9WGQ9;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	868177	869064	.	+	.	ID=GCA000153685_00814_gene;locus_tag=GCA000153685_00814
contig_1	Pyrodigal	CDS	868177	869064	.	+	0	ID=GCA000153685_00814;Name=putative oxidoreductase Rv0770;locus_tag=GCA000153685_00814;product=putative oxidoreductase Rv0770;Dbxref=GO:0016054,GO:0016616,GO:0050661,GO:0051287;Parent=GCA000153685_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403924.1,SO:0001217,UniParc:UPI0000139CA1,UniRef:UniRef100_P9WNY3,UniRef:UniRef50_P9WNY3,UniRef:UniRef90_P9WNY3;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	869064	869495	.	+	.	ID=GCA000153685_00815_gene;locus_tag=GCA000153685_00815
contig_1	Pyrodigal	CDS	869064	869495	.	+	0	ID=GCA000153685_00815;Name=Carboxymuconolactone decarboxylase family protein;locus_tag=GCA000153685_00815;product=Carboxymuconolactone decarboxylase family protein;Parent=GCA000153685_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003918128.1,SO:0001217,UniParc:UPI00005EE445,UniRef:UniRef100_I6Y4S7,UniRef:UniRef50_L7VEE5,UniRef:UniRef90_A0A5B1BL59
contig_1	Pyrodigal	gene	869507	870775	.	+	.	ID=GCA000153685_00816_gene;locus_tag=GCA000153685_00816;gene=purD
contig_1	Pyrodigal	CDS	869507	870775	.	+	0	ID=GCA000153685_00816;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000153685_00816;product=Phosphoribosylamine--glycine ligase;Dbxref=GO:0004637,GO:0005524,GO:0006189,GO:0009113,GO:0046872;gene=purD;Parent=GCA000153685_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898580.1,SO:0001217,UniParc:UPI0000132A33,UniRef:UniRef100_P9WHM9,UniRef:UniRef50_P9WHM9,UniRef:UniRef90_P9WHM9;ec_number=6.3.4.13
contig_1	Pyrodigal	gene	870772	872355	.	-	.	ID=GCA000153685_00817_gene;locus_tag=GCA000153685_00817;gene=ggtA
contig_1	Pyrodigal	CDS	870772	872355	.	-	0	ID=GCA000153685_00817;Name=gamma-glutamyltranspeptidase GgtA;locus_tag=GCA000153685_00817;product=gamma-glutamyltranspeptidase GgtA;Dbxref=GO:0006750,GO:0006751,GO:0036374;gene=ggtA;Parent=GCA000153685_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003918129,RefSeq:WP_003911281.1,SO:0001217,UniParc:UPI0001E61E76,UniRef:UniRef100_I6X9S5,UniRef:UniRef50_I6X9S5,UniRef:UniRef90_I6X9S5;ec_number=2.3.2.2
contig_1	Pyrodigal	gene	872361	873062	.	-	.	ID=GCA000153685_00818_gene;locus_tag=GCA000153685_00818
contig_1	Pyrodigal	CDS	872361	873062	.	-	0	ID=GCA000153685_00818;Name=Acyl-CoA:diacylglycerol acyltransferase;locus_tag=GCA000153685_00818;product=Acyl-CoA:diacylglycerol acyltransferase;Parent=GCA000153685_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003903167.1,SO:0001217,UniParc:UPI00019017DB,UniRef:UniRef100_I6Y8R4,UniRef:UniRef50_A0A1A2PX54,UniRef:UniRef90_I6Y8R4
contig_1	Pyrodigal	gene	873379	873951	.	+	.	ID=GCA000153685_00819_gene;locus_tag=GCA000153685_00819;gene=ybjK
contig_1	Pyrodigal	CDS	873379	873951	.	+	0	ID=GCA000153685_00819;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_00819;product=HTH tetR-type domain-containing protein;gene=ybjK;Parent=GCA000153685_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3226,COG:K,KEGG:K23778,SO:0001217,UniParc:UPI00005EE446,UniRef:UniRef100_A0A0H3L7C9,UniRef:UniRef50_P71830,UniRef:UniRef90_P71830
contig_1	Pyrodigal	gene	873905	874684	.	-	.	ID=GCA000153685_00820_gene;locus_tag=GCA000153685_00820
contig_1	Pyrodigal	CDS	873905	874684	.	-	0	ID=GCA000153685_00820;Name=GTP pyrophosphokinase;locus_tag=GCA000153685_00820;product=GTP pyrophosphokinase;Parent=GCA000153685_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403949.1,SO:0001217,UniParc:UPI00000D1208,UniRef:UniRef100_I6Y4S9,UniRef:UniRef50_A0A1A2BN37,UniRef:UniRef90_I6Y4S9
contig_1	Pyrodigal	gene	874929	876347	.	+	.	ID=GCA000153685_00821_gene;locus_tag=GCA000153685_00821;gene=purB
contig_1	Pyrodigal	CDS	874929	876347	.	+	0	ID=GCA000153685_00821;Name=adenylosuccinate lyase;locus_tag=GCA000153685_00821;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0009152;gene=purB;Parent=GCA000153685_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898583.1,SO:0001217,UniParc:UPI00000D122A,UniRef:UniRef100_I6XWA1,UniRef:UniRef50_A0A0M0BP82,UniRef:UniRef90_I6XWA1;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	876352	877596	.	+	.	ID=GCA000153685_00822_gene;locus_tag=GCA000153685_00822;gene=cyp126
contig_1	Pyrodigal	CDS	876352	877596	.	+	0	ID=GCA000153685_00822;Name=Putative cytochrome P450 126;locus_tag=GCA000153685_00822;product=Putative cytochrome P450 126;Dbxref=GO:0005506,GO:0006707,GO:0008395,GO:0020037,GO:0036199;gene=cyp126;Parent=GCA000153685_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898584.1,SO:0001217,UniParc:UPI0000126BAE,UniRef:UniRef100_P9WPN9,UniRef:UniRef50_P9WPN9,UniRef:UniRef90_P9WPN9;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	877593	878213	.	-	.	ID=GCA000153685_00823_gene;locus_tag=GCA000153685_00823
contig_1	Pyrodigal	CDS	877593	878213	.	-	0	ID=GCA000153685_00823;Name=putative conserved transmembrane protein;locus_tag=GCA000153685_00823;product=putative conserved transmembrane protein;Parent=GCA000153685_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403957.1,SO:0001217,UniParc:UPI00000CCC1F,UniRef:UniRef100_P71833,UniRef:UniRef50_Q7APX3,UniRef:UniRef90_P71833
contig_1	Pyrodigal	gene	878264	879157	.	+	.	ID=GCA000153685_00824_gene;locus_tag=GCA000153685_00824;gene=purC
contig_1	Pyrodigal	CDS	878264	879157	.	+	0	ID=GCA000153685_00824;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000153685_00824;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0005737,GO:0006164,GO:0006189;gene=purC;Parent=GCA000153685_00824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403962.1,SO:0001217,UniParc:UPI0000132A9D,UniRef:UniRef100_P9WHN1,UniRef:UniRef50_P9WHN1,UniRef:UniRef90_P9WHN1;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	879154	881313	.	+	.	ID=GCA000153685_00825_gene;locus_tag=GCA000153685_00825
contig_1	Pyrodigal	CDS	879154	881313	.	+	0	ID=GCA000153685_00825;Name=Oligopeptidase B;locus_tag=GCA000153685_00825;product=Oligopeptidase B;Parent=GCA000153685_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01354,RefSeq:WP_003898586.1,SO:0001217,UniParc:UPI00001A8F2C,UniRef:UniRef100_A0A0H3LDB7,UniRef:UniRef50_A0A653ST95,UniRef:UniRef90_A0A655D1J4;ec_number=3.4.21.83
contig_1	Pyrodigal	gene	881265	881426	.	-	.	ID=GCA000153685_00826_gene;locus_tag=GCA000153685_00826
contig_1	Pyrodigal	CDS	881265	881426	.	-	0	ID=GCA000153685_00826;Name=Integral membrane protein;locus_tag=GCA000153685_00826;product=Integral membrane protein;Parent=GCA000153685_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D235,UniRef:UniRef100_A0A0H3L6J1,UniRef:UniRef50_A0A0H3L6J1,UniRef:UniRef90_A0A0H3L6J1
contig_1	Pyrodigal	gene	881741	883363	.	-	.	ID=GCA000153685_00827_gene;locus_tag=GCA000153685_00827;gene=emrB
contig_1	Pyrodigal	CDS	881741	883363	.	-	0	ID=GCA000153685_00827;Name=Multidrug resistance B-like protein;locus_tag=GCA000153685_00827;product=Multidrug resistance B-like protein;Dbxref=GO:0005576,GO:0005886,GO:0022857,GO:0055085;gene=emrB;Parent=GCA000153685_00827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403977.1,SO:0001217,UniParc:UPI00000CA925,UniRef:UniRef100_P9WG89,UniRef:UniRef50_P9WG89,UniRef:UniRef90_P9WG89
contig_1	Pyrodigal	gene	883561	884247	.	+	.	ID=GCA000153685_00828_gene;locus_tag=GCA000153685_00828
contig_1	Pyrodigal	CDS	883561	884247	.	+	0	ID=GCA000153685_00828;Name=Deacetylase;locus_tag=GCA000153685_00828;product=Deacetylase;Parent=GCA000153685_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898589.1,SO:0001217,UniParc:UPI00000CCC20,UniRef:UniRef100_P71837,UniRef:UniRef50_P71837,UniRef:UniRef90_P71837
contig_1	Pyrodigal	gene	884263	885963	.	+	.	ID=GCA000153685_00829_gene;locus_tag=GCA000153685_00829
contig_1	Pyrodigal	CDS	884263	885963	.	+	0	ID=GCA000153685_00829;Name=FAD-binding dehydrogenase;locus_tag=GCA000153685_00829;product=FAD-binding dehydrogenase;Dbxref=GO:0006694,GO:0016042,GO:0016627;Parent=GCA000153685_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07077,RefSeq:WP_003898590.1,SO:0001217,UniParc:UPI0000164FB6,UniRef:UniRef100_Q7D9A2,UniRef:UniRef50_P71838,UniRef:UniRef90_P71838;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	885998	886636	.	-	.	ID=GCA000153685_00830_gene;locus_tag=GCA000153685_00830
contig_1	Pyrodigal	CDS	885998	886636	.	-	0	ID=GCA000153685_00830;Name=Protein Rv0786c;locus_tag=GCA000153685_00830;product=Protein Rv0786c;Parent=GCA000153685_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403989.1,SO:0001217,UniParc:UPI0000164FB7,UniRef:UniRef100_P71839,UniRef:UniRef50_P71839,UniRef:UniRef90_P71839
contig_1	Pyrodigal	gene	886670	887341	.	+	.	ID=GCA000153685_00831_gene;locus_tag=GCA000153685_00831
contig_1	Pyrodigal	CDS	886670	887341	.	+	0	ID=GCA000153685_00831;Name=Metallo-beta-lactamase superfamily protein%2Cputative;locus_tag=GCA000153685_00831;product=Metallo-beta-lactamase superfamily protein%2Cputative;Parent=GCA000153685_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E61638,UniRef:UniRef100_A0A1R3XWF9,UniRef:UniRef50_P71840,UniRef:UniRef90_P71840
contig_1	Pyrodigal	gene	887447	887686	.	+	.	ID=GCA000153685_00832_gene;locus_tag=GCA000153685_00832;gene=purS
contig_1	Pyrodigal	CDS	887447	887686	.	+	0	ID=GCA000153685_00832;Name=phosphoribosylformylglycinamidine synthase subunit PurS;locus_tag=GCA000153685_00832;product=phosphoribosylformylglycinamidine synthase subunit PurS;gene=purS;Parent=GCA000153685_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1828,COG:F,RefSeq:WP_003403993.1,SO:0001217,UniParc:UPI00000D2BAC,UniRef:UniRef100_I6Y8S6,UniRef:UniRef50_A0A0Q4H4Q3,UniRef:UniRef90_I6Y8S6;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	887683	888357	.	+	.	ID=GCA000153685_00833_gene;locus_tag=GCA000153685_00833;gene=purQ
contig_1	Pyrodigal	CDS	887683	888357	.	+	0	ID=GCA000153685_00833;Name=phosphoribosylformylglycinamidine synthase subunit PurQ;locus_tag=GCA000153685_00833;product=phosphoribosylformylglycinamidine synthase subunit PurQ;Dbxref=GO:0004359,GO:0004642,GO:0005524,GO:0005737,GO:0005886,GO:0006189;gene=purQ;Parent=GCA000153685_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003403995.1,SO:0001217,UniParc:UPI0000132B5E,UniRef:UniRef100_P9WHL5,UniRef:UniRef50_P9WHL5,UniRef:UniRef90_P9WHL5;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	888374	888847	.	-	.	ID=GCA000153685_00834_gene;locus_tag=GCA000153685_00834;gene=ybjN
contig_1	Pyrodigal	CDS	888374	888847	.	-	0	ID=GCA000153685_00834;Name=YbjN domain-containing protein;locus_tag=GCA000153685_00834;product=YbjN domain-containing protein;gene=ybjN;Parent=GCA000153685_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014584683.1,SO:0001217,UniParc:UPI00005EE44A,UniRef:UniRef100_I6Y4U0,UniRef:UniRef50_I6Y4U0,UniRef:UniRef90_I6Y4U0
contig_1	Pyrodigal	gene	888995	889723	.	-	.	ID=GCA000153685_00835_gene;locus_tag=GCA000153685_00835
contig_1	Pyrodigal	CDS	888995	889723	.	-	0	ID=GCA000153685_00835;Name=Transglutaminase-like domain-containing protein;locus_tag=GCA000153685_00835;product=Transglutaminase-like domain-containing protein;Parent=GCA000153685_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404002.1,SO:0001217,UniParc:UPI00000D1224,UniRef:UniRef100_I6XWA9,UniRef:UniRef50_A0A498Q9C8,UniRef:UniRef90_I6XWA9
contig_1	Pyrodigal	gene	889720	890763	.	-	.	ID=GCA000153685_00836_gene;locus_tag=GCA000153685_00836
contig_1	Pyrodigal	CDS	889720	890763	.	-	0	ID=GCA000153685_00836;Name=Luciferase-like domain-containing protein;locus_tag=GCA000153685_00836;product=Luciferase-like domain-containing protein;Parent=GCA000153685_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404004.1,SO:0001217,UniParc:UPI00000D11F2,UniRef:UniRef100_I6X9T8,UniRef:UniRef50_A0A498QYB6,UniRef:UniRef90_A0A9P2H662
contig_1	Pyrodigal	gene	890760	891569	.	-	.	ID=GCA000153685_00837_gene;locus_tag=GCA000153685_00837
contig_1	Pyrodigal	CDS	890760	891569	.	-	0	ID=GCA000153685_00837;Name=HTH-type transcriptional regulator Rv0792c;locus_tag=GCA000153685_00837;product=HTH-type transcriptional regulator Rv0792c;Dbxref=GO:0003677,GO:0003700,GO:0045892,GO:0052572;Parent=GCA000153685_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404007.1,SO:0001217,UniParc:UPI00000C1597,UniRef:UniRef100_O86331,UniRef:UniRef50_O86331,UniRef:UniRef90_O86331
contig_1	Pyrodigal	gene	891642	891947	.	+	.	ID=GCA000153685_00838_gene;locus_tag=GCA000153685_00838
contig_1	Pyrodigal	CDS	891642	891947	.	+	0	ID=GCA000153685_00838;Name=Putative monooxygenase Rv0793;locus_tag=GCA000153685_00838;product=Putative monooxygenase Rv0793;Dbxref=GO:0003824,GO:0004497;Parent=GCA000153685_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404010.1,SO:0001217,UniParc:UPI00000C1598,UniRef:UniRef100_O86332,UniRef:UniRef50_O86332,UniRef:UniRef90_O86332;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	892060	893559	.	-	.	ID=GCA000153685_00839_gene;locus_tag=GCA000153685_00839
contig_1	Pyrodigal	CDS	892060	893559	.	-	0	ID=GCA000153685_00839;Name=Oxidoreductase;locus_tag=GCA000153685_00839;product=Oxidoreductase;Parent=GCA000153685_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404013.1,SO:0001217,UniParc:UPI00000D42A4,UniRef:UniRef100_A5U0I3,UniRef:UniRef50_A0A9X2KF72,UniRef:UniRef90_A5U0I3
contig_1	Pyrodigal	gene	893952	895046	.	+	.	ID=GCA000153685_00840_gene;locus_tag=GCA000153685_00840;gene=tnp
contig_1	Pyrodigal	CDS	893952	895046	.	+	0	ID=GCA000153685_00840;Name=IS110-like element IS1547 family transposase;locus_tag=GCA000153685_00840;product=IS110-like element IS1547 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900212,RefSeq:WP_009935676.1,SO:0001217,UniParc:UPI00000C155D,UniRef:UniRef100_O07182,UniRef:UniRef50_O07182,UniRef:UniRef90_O07182
contig_1	Pyrodigal	gene	895036	895833	.	-	.	ID=GCA000153685_00841_gene;locus_tag=GCA000153685_00841;gene=enc
contig_1	Pyrodigal	CDS	895036	895833	.	-	0	ID=GCA000153685_00841;Name=family 1 encapsulin nanocompartment shell protein;locus_tag=GCA000153685_00841;product=family 1 encapsulin nanocompartment shell protein;Dbxref=GO:0005576,GO:0005886,GO:0140737;gene=enc;Parent=GCA000153685_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1659,COG:V,RefSeq:WP_003404092.1,SO:0001217,UniParc:UPI00000D5E0F,UniRef:UniRef100_I6WZG6,UniRef:UniRef50_I6WZG6,UniRef:UniRef90_I6WZG6
contig_1	Pyrodigal	gene	895830	896837	.	-	.	ID=GCA000153685_00842_gene;locus_tag=GCA000153685_00842;gene=dyp
contig_1	Pyrodigal	CDS	895830	896837	.	-	0	ID=GCA000153685_00842;Name=Dye-decolorizing peroxidase;locus_tag=GCA000153685_00842;product=Dye-decolorizing peroxidase;Dbxref=GO:0004601,GO:0005829,GO:0020037,GO:0046872,GO:0140737;gene=dyp;Parent=GCA000153685_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07223,RefSeq:WP_003404098.1,SO:0001217,UniParc:UPI00000D0F7F,UniRef:UniRef100_I6Y4U9,UniRef:UniRef50_I6Y4U9,UniRef:UniRef90_I6Y4U9;ec_number=1.11.1.7
contig_1	Pyrodigal	gene	896882	898183	.	+	.	ID=GCA000153685_00843_gene;locus_tag=GCA000153685_00843;gene=apeB
contig_1	Pyrodigal	CDS	896882	898183	.	+	0	ID=GCA000153685_00843;Name=M18 family aminopeptidase;locus_tag=GCA000153685_00843;product=M18 family aminopeptidase;Dbxref=GO:0004177,GO:0005829,GO:0005886,GO:0006508,GO:0008237,GO:0008270;gene=apeB;Parent=GCA000153685_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404103.1,SO:0001217,UniParc:UPI0000164FB8,UniRef:UniRef100_P59951,UniRef:UniRef50_Q50022,UniRef:UniRef90_P9WHT1;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	898195	898542	.	+	.	ID=GCA000153685_00844_gene;locus_tag=GCA000153685_00844
contig_1	Pyrodigal	CDS	898195	898542	.	+	0	ID=GCA000153685_00844;Name=VOC domain-containing protein;locus_tag=GCA000153685_00844;product=VOC domain-containing protein;Parent=GCA000153685_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898592.1,SO:0001217,UniParc:UPI0000033282,UniRef:UniRef100_O06633,UniRef:UniRef50_I4BPI5,UniRef:UniRef90_R4M3K6
contig_1	Pyrodigal	gene	898536	899192	.	-	.	ID=GCA000153685_00845_gene;locus_tag=GCA000153685_00845
contig_1	Pyrodigal	CDS	898536	899192	.	-	0	ID=GCA000153685_00845;Name=Acetyl- and succinyl-CoA transferase Rv0802c;locus_tag=GCA000153685_00845;product=Acetyl- and succinyl-CoA transferase Rv0802c;Dbxref=GO:0005737,GO:0006104,GO:0008999,GO:0061733,GO:1990189;Parent=GCA000153685_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404111.1,SO:0001217,UniParc:UPI00000D10A1,UniRef:UniRef100_P9WQG7,UniRef:UniRef50_P9WQG7,UniRef:UniRef90_P9WQG7;ec_number=2.8.1.-
contig_1	Pyrodigal	gene	899348	901648	.	+	.	ID=GCA000153685_00846_gene;locus_tag=GCA000153685_00846;gene=purL
contig_1	Pyrodigal	CDS	899348	901648	.	+	0	ID=GCA000153685_00846;Name=phosphoribosylformylglycinamidine synthase subunit PurL;locus_tag=GCA000153685_00846;product=phosphoribosylformylglycinamidine synthase subunit PurL;Dbxref=GO:0000287,GO:0004642,GO:0005524,GO:0005737,GO:0006164,GO:0006189;gene=purL;Parent=GCA000153685_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23269,SO:0001217,UniParc:UPI00005F6164,UniRef:UniRef100_P9WHL6,UniRef:UniRef50_P9WHL7,UniRef:UniRef90_P9WHL7;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	901645	902274	.	+	.	ID=GCA000153685_00847_gene;locus_tag=GCA000153685_00847
contig_1	Pyrodigal	CDS	901645	902274	.	+	0	ID=GCA000153685_00847;Name=Abortive phage infection protein;locus_tag=GCA000153685_00847;product=Abortive phage infection protein;Parent=GCA000153685_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404117.1,SO:0001217,UniParc:UPI00000D107C,UniRef:UniRef100_I6Y4V2,UniRef:UniRef50_A0A1H6JSY9,UniRef:UniRef90_I6Y4V2
contig_1	Pyrodigal	gene	902395	903351	.	+	.	ID=GCA000153685_00848_gene;locus_tag=GCA000153685_00848;gene=cpdA
contig_1	Pyrodigal	CDS	902395	903351	.	+	0	ID=GCA000153685_00848;Name=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;locus_tag=GCA000153685_00848;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;Dbxref=GO:0000166,GO:0004115,GO:0005576,GO:0005737,GO:0005886,GO:0008663,GO:0030313,GO:0046872,GO:0047555;gene=cpdA;Parent=GCA000153685_00848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404120,RefSeq:WP_003404120.1,SO:0001217,UniParc:UPI00000D5F30,UniRef:UniRef100_P9WP65,UniRef:UniRef50_P9WP65,UniRef:UniRef90_P9WP65;ec_number=3.1.4.53
contig_1	Pyrodigal	gene	903296	904894	.	-	.	ID=GCA000153685_00849_gene;locus_tag=GCA000153685_00849;gene=cpsY
contig_1	Pyrodigal	CDS	903296	904894	.	-	0	ID=GCA000153685_00849;Name=Exopolysaccharide phosphotransferase CpsY;locus_tag=GCA000153685_00849;product=Exopolysaccharide phosphotransferase CpsY;Dbxref=GO:0000271,GO:0009274,GO:0016772;gene=cpsY;Parent=GCA000153685_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898594.1,SO:0001217,UniParc:UPI00000D5E60,UniRef:UniRef100_P9WGD1,UniRef:UniRef50_P9WGD1,UniRef:UniRef90_P9WGD1;ec_number=2.7.-.-
contig_1	Pyrodigal	gene	905199	905588	.	+	.	ID=GCA000153685_00850_gene;locus_tag=GCA000153685_00850
contig_1	Pyrodigal	CDS	905199	905588	.	+	0	ID=GCA000153685_00850;Name=Bacterial SCP orthologue domain-containing protein;locus_tag=GCA000153685_00850;product=Bacterial SCP orthologue domain-containing protein;Parent=GCA000153685_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404127.1,SO:0001217,UniParc:UPI00000D11DB,UniRef:UniRef100_I6Y8U3,UniRef:UniRef50_A0A379M302,UniRef:UniRef90_I6Y8U3
contig_1	Pyrodigal	gene	905729	907258	.	+	.	ID=GCA000153685_00851_gene;locus_tag=GCA000153685_00851;gene=purF
contig_1	Pyrodigal	CDS	905729	907258	.	+	0	ID=GCA000153685_00851;Name=amidophosphoribosyltransferase;locus_tag=GCA000153685_00851;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0006189,GO:0009113,GO:0051539;gene=purF;Parent=GCA000153685_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_031649609.1,SO:0001217,UniParc:UPI0004F3D54E,UniRef:UniRef100_UPI0004F3D54E,UniRef:UniRef50_P9WHQ7,UniRef:UniRef90_Q50028;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	907289	908383	.	+	.	ID=GCA000153685_00852_gene;locus_tag=GCA000153685_00852
contig_1	Pyrodigal	CDS	907289	908383	.	+	0	ID=GCA000153685_00852;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000153685_00852;product=Phosphoribosylformylglycinamidine cyclo-ligase;Parent=GCA000153685_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404132.1,SO:0001217,UniParc:UPI00000D5F7F,UniRef:UniRef100_I6Y4V6,UniRef:UniRef50_M0QIP8,UniRef:UniRef90_I6Y4V6
contig_1	Pyrodigal	gene	908469	908651	.	-	.	ID=GCA000153685_00853_gene;locus_tag=GCA000153685_00853
contig_1	Pyrodigal	CDS	908469	908651	.	-	0	ID=GCA000153685_00853;Name=DUF3073 domain-containing protein;locus_tag=GCA000153685_00853;product=DUF3073 domain-containing protein;Parent=GCA000153685_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404135.1,SO:0001217,UniParc:UPI00000D0FDC,UniRef:UniRef100_I6XWB9,UniRef:UniRef50_I6XWB9,UniRef:UniRef90_I6XWB9
contig_1	Pyrodigal	gene	908798	909904	.	-	.	ID=GCA000153685_00854_gene;locus_tag=GCA000153685_00854
contig_1	Pyrodigal	CDS	908798	909904	.	-	0	ID=GCA000153685_00854;Name=Conserved protein;locus_tag=GCA000153685_00854;product=Conserved protein;Parent=GCA000153685_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06980,RefSeq:WP_003404137.1,SO:0001217,UniParc:UPI00000D0F4D,UniRef:UniRef100_I6X9V3,UniRef:UniRef50_A0A2P8AUE5,UniRef:UniRef90_I6X9V3
contig_1	Pyrodigal	gene	909969	910856	.	+	.	ID=GCA000153685_00855_gene;locus_tag=GCA000153685_00855
contig_1	Pyrodigal	CDS	909969	910856	.	+	0	ID=GCA000153685_00855;Name=aminodeoxychorismate lyase;locus_tag=GCA000153685_00855;product=aminodeoxychorismate lyase;Dbxref=GO:0005829,GO:0005886,GO:0008360,GO:0008483,GO:0008696,GO:0009252,GO:0019752,GO:0030170,GO:0046654,GO:0046656;Parent=GCA000153685_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BB0,UniRef:UniRef100_Q8VKD6,UniRef:UniRef50_Q79FW0,UniRef:UniRef90_Q79FW0;ec_number=4.1.3.38
contig_1	Pyrodigal	gene	910902	911582	.	-	.	ID=GCA000153685_00856_gene;locus_tag=GCA000153685_00856
contig_1	Pyrodigal	CDS	910902	911582	.	-	0	ID=GCA000153685_00856;Name=Peroxynitrite isomerase 1;locus_tag=GCA000153685_00856;product=Peroxynitrite isomerase 1;Dbxref=GO:0020037,GO:0046872,GO:0062213;Parent=GCA000153685_00856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898596.1,SO:0001217,UniParc:UPI00000D10D8,UniRef:UniRef100_P9WFG9,UniRef:UniRef50_P9WFG9,UniRef:UniRef90_P9WFG9;ec_number=5.99.-.-
contig_1	Pyrodigal	gene	911579	911677	.	-	.	ID=GCA000153685_00857_gene;locus_tag=GCA000153685_00857
contig_1	Pyrodigal	CDS	911579	911677	.	-	0	ID=GCA000153685_00857;Name=Potassium-transporting ATPase subunit F;locus_tag=GCA000153685_00857;product=Potassium-transporting ATPase subunit F;Parent=GCA000153685_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BB1,UniRef:UniRef100_Q8VKD5,UniRef:UniRef50_A0A7I7UKA7,UniRef:UniRef90_B2HH19
contig_1	Pyrodigal	gene	911745	912017	.	-	.	ID=GCA000153685_00858_gene;locus_tag=GCA000153685_00858
contig_1	Pyrodigal	CDS	911745	912017	.	-	0	ID=GCA000153685_00858;Name=DUF1416 domain-containing protein;locus_tag=GCA000153685_00858;product=DUF1416 domain-containing protein;Parent=GCA000153685_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61F5C,UniRef:UniRef100_A0A0E8BR24,UniRef:UniRef50_P0CG96,UniRef:UniRef90_X8CPE3
contig_1	Pyrodigal	gene	912049	912882	.	-	.	ID=GCA000153685_00859_gene;locus_tag=GCA000153685_00859;gene=cysA1
contig_1	Pyrodigal	CDS	912049	912882	.	-	0	ID=GCA000153685_00859;Name=Putative thiosulfate sulfurtransferase 1;locus_tag=GCA000153685_00859;product=Putative thiosulfate sulfurtransferase 1;Dbxref=GO:0004792;gene=cysA1;Parent=GCA000153685_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404293.1,SO:0001217,UniParc:UPI0000136F18,UniRef:UniRef100_P9WHF9,UniRef:UniRef50_P9WHF9,UniRef:UniRef90_P9WHF9;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	913175	913597	.	-	.	ID=GCA000153685_00860_gene;locus_tag=GCA000153685_00860
contig_1	Pyrodigal	CDS	913175	913597	.	-	0	ID=GCA000153685_00860;Name=Thioredoxin;locus_tag=GCA000153685_00860;product=Thioredoxin;Parent=GCA000153685_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900215.1,SO:0001217,UniParc:UPI0001278069,UniRef:UniRef100_A0A0H3L6L4,UniRef:UniRef50_A0A0H3L6L4,UniRef:UniRef90_A0A0H3L6L4
contig_1	Pyrodigal	gene	913594	914406	.	-	.	ID=GCA000153685_00861_gene;locus_tag=GCA000153685_00861;gene=lmeA
contig_1	Pyrodigal	CDS	913594	914406	.	-	0	ID=GCA000153685_00861;Name=mannan chain length control protein LmeA;locus_tag=GCA000153685_00861;product=mannan chain length control protein LmeA;gene=lmeA;Parent=GCA000153685_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404298.1,SO:0001217,UniParc:UPI00000D1181,UniRef:UniRef100_A5U0K6,UniRef:UniRef50_A0A124E125,UniRef:UniRef90_R4LT40
contig_1	Pyrodigal	gene	914539	915303	.	+	.	ID=GCA000153685_00862_gene;locus_tag=GCA000153685_00862
contig_1	Pyrodigal	CDS	914539	915303	.	+	0	ID=GCA000153685_00862;Name=Transcriptional regulatory protein;locus_tag=GCA000153685_00862;product=Transcriptional regulatory protein;Parent=GCA000153685_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_O53830,UniRef:UniRef90_O53830
contig_1	Pyrodigal	gene	915300	916247	.	+	.	ID=GCA000153685_00863_gene;locus_tag=GCA000153685_00863;gene=mshD
contig_1	Pyrodigal	CDS	915300	916247	.	+	0	ID=GCA000153685_00863;Name=mycothiol synthase;locus_tag=GCA000153685_00863;product=mycothiol synthase;Dbxref=GO:0005829,GO:0010125,GO:0010126,GO:0035447,GO:0051701,GO:0070301,GO:0071468;gene=mshD;Parent=GCA000153685_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404307.1,SO:0001217,UniParc:UPI00000D119B,UniRef:UniRef100_P9WJM7,UniRef:UniRef50_P9WJM7,UniRef:UniRef90_P9WJM7;ec_number=2.3.1.189
contig_1	Pyrodigal	gene	916290	917066	.	+	.	ID=GCA000153685_00864_gene;locus_tag=GCA000153685_00864;gene=pstB
contig_1	Pyrodigal	CDS	916290	917066	.	+	0	ID=GCA000153685_00864;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000153685_00864;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000153685_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_003404312.1,SO:0001217,UniParc:UPI00000D6043,UniRef:UniRef100_P9WQL1,UniRef:UniRef50_P9WQL1,UniRef:UniRef90_P9WQL1;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	917122	917763	.	-	.	ID=GCA000153685_00865_gene;locus_tag=GCA000153685_00865;gene=phoU
contig_1	Pyrodigal	CDS	917122	917763	.	-	0	ID=GCA000153685_00865;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000153685_00865;product=phosphate signaling complex protein PhoU;Dbxref=GO:0005737,GO:0006817,GO:0022611,GO:0030643,GO:0042803,GO:0045936,GO:0046677,GO:2000186;gene=phoU;Parent=GCA000153685_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0704,COG:P,RefSeq:WP_003404314.1,SO:0001217,UniParc:UPI0000131A46,UniRef:UniRef100_P9WI95,UniRef:UniRef50_P9WI95,UniRef:UniRef90_P9WI95
contig_1	Pyrodigal	gene	917821	919875	.	-	.	ID=GCA000153685_00866_gene;locus_tag=GCA000153685_00866;gene=lytR
contig_1	Pyrodigal	CDS	917821	919875	.	-	0	ID=GCA000153685_00866;Name=Transcriptional regulator LytR family;locus_tag=GCA000153685_00866;product=Transcriptional regulator LytR family;gene=lytR;Parent=GCA000153685_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898600.1,SO:0001217,UniParc:UPI00000318C5,UniRef:UniRef100_I6WZI4,UniRef:UniRef50_B2HH07,UniRef:UniRef90_A0A654ZQ85
contig_1	Pyrodigal	gene	920100	921119	.	-	.	ID=GCA000153685_00867_gene;locus_tag=GCA000153685_00867;gene=dusB
contig_1	Pyrodigal	CDS	920100	921119	.	-	0	ID=GCA000153685_00867;Name=tRNA dihydrouridine synthase DusB;locus_tag=GCA000153685_00867;product=tRNA dihydrouridine synthase DusB;Dbxref=GO:0000049,GO:0008033,GO:0017150,GO:0050660;gene=dusB;Parent=GCA000153685_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,KEGG:K05540,SO:0001217,UniRef:UniRef50_P9WNS7,UniRef:UniRef90_P9WNS7;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	921207	922223	.	-	.	ID=GCA000153685_00868_gene;locus_tag=GCA000153685_00868;gene=desA1
contig_1	Pyrodigal	CDS	921207	922223	.	-	0	ID=GCA000153685_00868;Name=acyl-ACP desaturase DesA1;locus_tag=GCA000153685_00868;product=acyl-ACP desaturase DesA1;Dbxref=GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0009986,GO:0045300,GO:0046872,GO:0052572;gene=desA1;Parent=GCA000153685_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404321,KEGG:K03921,RefSeq:WP_003404321.1,SO:0001217,UniParc:UPI00000D3B0E,UniRef:UniRef100_P9WNZ7,UniRef:UniRef50_P9WNZ7,UniRef:UniRef90_P9WNZ7;ec_number=1.14.19.-
contig_1	Infernal	gene	921838	921905	.	+	.	ID=GCA000153685_00869_gene;locus_tag=GCA000153685_00869;gene=ASdes
contig_1	Infernal	ncRNA	921838	921905	1.9e-14	+	.	ID=GCA000153685_00869;Name=ASdes TB sRNA;locus_tag=GCA000153685_00869;product=ASdes TB sRNA;Dbxref=RFAM:RF01781;Parent=GCA000153685_00869_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01781
contig_1	Pyrodigal	gene	922385	923026	.	-	.	ID=GCA000153685_00870_gene;locus_tag=GCA000153685_00870
contig_1	Pyrodigal	CDS	922385	923026	.	-	0	ID=GCA000153685_00870;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_00870;product=HTH tetR-type domain-containing protein;Parent=GCA000153685_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404326.1,SO:0001217,UniParc:UPI0000165251,UniRef:UniRef100_O53836,UniRef:UniRef50_A0A9P2H666,UniRef:UniRef90_A0A9P2H666
contig_1	Pyrodigal	gene	923080	924162	.	+	.	ID=GCA000153685_00871_gene;locus_tag=GCA000153685_00871
contig_1	Pyrodigal	CDS	923080	924162	.	+	0	ID=GCA000153685_00871;Name=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;locus_tag=GCA000153685_00871;product=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;Parent=GCA000153685_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62D7D,UniRef:UniRef100_Q7D979,UniRef:UniRef50_O53837,UniRef:UniRef90_O53837
contig_1	Pyrodigal	gene	924214	924537	.	-	.	ID=GCA000153685_00872_gene;locus_tag=GCA000153685_00872;gene=kmtR
contig_1	Pyrodigal	CDS	924214	924537	.	-	0	ID=GCA000153685_00872;Name=HTH-type transcriptional regulator KmtR;locus_tag=GCA000153685_00872;product=HTH-type transcriptional regulator KmtR;Dbxref=GO:0003677,GO:0003700,GO:0010045,GO:0032025;gene=kmtR;Parent=GCA000153685_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021787B1,UniRef:UniRef100_O53838,UniRef:UniRef50_O53838,UniRef:UniRef90_O53838
contig_1	Pyrodigal	gene	924664	925086	.	-	.	ID=GCA000153685_00873_gene;locus_tag=GCA000153685_00873
contig_1	Pyrodigal	CDS	924664	925086	.	-	0	ID=GCA000153685_00873;Name=putative deaminase;locus_tag=GCA000153685_00873;product=putative deaminase;Parent=GCA000153685_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404336.1,SO:0001217,UniParc:UPI00000C1552,UniRef:UniRef100_O53839,UniRef:UniRef50_A0A447GJQ5,UniRef:UniRef90_O53839
contig_1	Pyrodigal	gene	925443	926348	.	+	.	ID=GCA000153685_00874_gene;locus_tag=GCA000153685_00874
contig_1	Pyrodigal	CDS	925443	926348	.	+	0	ID=GCA000153685_00874;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0853;locus_tag=GCA000153685_00874;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0853;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404349.1,SO:0001217,UniParc:UPI00000D101A,UniRef:UniRef100_P9WFI3,UniRef:UniRef50_P9WFI3,UniRef:UniRef90_P9WFI3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	926367	927182	.	-	.	ID=GCA000153685_00875_gene;locus_tag=GCA000153685_00875
contig_1	Pyrodigal	CDS	926367	927182	.	-	0	ID=GCA000153685_00875;Name=Conserved protein;locus_tag=GCA000153685_00875;product=Conserved protein;Parent=GCA000153685_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404352.1,SO:0001217,UniParc:UPI0000165254,UniRef:UniRef100_O53842,UniRef:UniRef50_O53842,UniRef:UniRef90_O53842
contig_1	tRNAscan-SE	gene	927276	927348	.	-	.	ID=GCA000153685_00876_gene;locus_tag=GCA000153685_00876;gene=trnK
contig_1	tRNAscan-SE	tRNA	927276	927348	.	-	.	ID=GCA000153685_00876;Name=tRNA-Lys(ttt);locus_tag=GCA000153685_00876;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000153685_00876_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	927472	927545	.	+	.	ID=GCA000153685_00877_gene;locus_tag=GCA000153685_00877;gene=trnE
contig_1	tRNAscan-SE	tRNA	927472	927545	.	+	.	ID=GCA000153685_00877;Name=tRNA-Glu(ttc);locus_tag=GCA000153685_00877;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000153685_00877_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	927583	927659	.	+	.	ID=GCA000153685_00878_gene;locus_tag=GCA000153685_00878;gene=trnD
contig_1	tRNAscan-SE	tRNA	927583	927659	.	+	.	ID=GCA000153685_00878;Name=tRNA-Asp(gtc);locus_tag=GCA000153685_00878;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000153685_00878_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	927686	927762	.	+	.	ID=GCA000153685_00879_gene;locus_tag=GCA000153685_00879;gene=trnF
contig_1	tRNAscan-SE	tRNA	927686	927762	.	+	.	ID=GCA000153685_00879;Name=tRNA-Phe(gaa);locus_tag=GCA000153685_00879;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000153685_00879_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	Pyrodigal	gene	928424	928837	.	+	.	ID=GCA000153685_00880_gene;locus_tag=GCA000153685_00880
contig_1	Pyrodigal	CDS	928424	928837	.	+	0	ID=GCA000153685_00880;Name=PE-PGRS family protein PE_PGRS12;locus_tag=GCA000153685_00880;product=PE-PGRS family protein PE_PGRS12;Parent=GCA000153685_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404353.1,SO:0001217,UniParc:UPI0000165255,UniRef:UniRef100_Q79FV8,UniRef:UniRef50_A0A164BJM0,UniRef:UniRef90_Q79FV8
contig_1	Pyrodigal	gene	928834	931083	.	+	.	ID=GCA000153685_00881_gene;locus_tag=GCA000153685_00881
contig_1	Pyrodigal	CDS	928834	931083	.	+	0	ID=GCA000153685_00881;Name=PE-PGRS family protein;locus_tag=GCA000153685_00881;product=PE-PGRS family protein;Parent=GCA000153685_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054164.1,SO:0001217,UniParc:UPI0001534070,UniRef:UniRef100_A5U0M1,UniRef:UniRef50_A5U0M1,UniRef:UniRef90_A5U0M1
contig_1	Pyrodigal	gene	931310	933949	.	-	.	ID=GCA000153685_00882_gene;locus_tag=GCA000153685_00882
contig_1	Pyrodigal	CDS	931310	933949	.	-	0	ID=GCA000153685_00882;Name=PE domain-containing protein;locus_tag=GCA000153685_00882;product=PE domain-containing protein;Parent=GCA000153685_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345040.1,SO:0001217,UniParc:UPI0002A876F5,UniRef:UniRef100_UPI0002A876F5,UniRef:UniRef50_R4LVQ1,UniRef:UniRef90_R4LVQ1
contig_1	Pyrodigal	gene	934417	935061	.	+	.	ID=GCA000153685_00883_gene;locus_tag=GCA000153685_00883;gene=lpqQ
contig_1	Pyrodigal	CDS	934417	935061	.	+	0	ID=GCA000153685_00883;Name=putative lipoprotein LpqQ;locus_tag=GCA000153685_00883;product=putative lipoprotein LpqQ;gene=lpqQ;Parent=GCA000153685_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404362.1,SO:0001217,UniParc:UPI0000165256,UniRef:UniRef100_O53846,UniRef:UniRef50_A0A1A3KT70,UniRef:UniRef90_O53846
contig_1	Pyrodigal	gene	935042	935455	.	-	.	ID=GCA000153685_00884_gene;locus_tag=GCA000153685_00884
contig_1	Pyrodigal	CDS	935042	935455	.	-	0	ID=GCA000153685_00884;Name=Transmembrane protein;locus_tag=GCA000153685_00884;product=Transmembrane protein;Parent=GCA000153685_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913158.1,SO:0001217,UniParc:UPI0001E62020,UniRef:UniRef100_A0A0E7ZAQ3,UniRef:UniRef50_A0A0E7ZAQ3,UniRef:UniRef90_A0A0E7ZAQ3
contig_1	Pyrodigal	gene	935743	936489	.	-	.	ID=GCA000153685_00885_gene;locus_tag=GCA000153685_00885
contig_1	Pyrodigal	CDS	935743	936489	.	-	0	ID=GCA000153685_00885;Name=Nucleotidyltransferase;locus_tag=GCA000153685_00885;product=Nucleotidyltransferase;Parent=GCA000153685_00885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900221.1,SO:0001217,UniParc:UPI00000CCB9F,UniRef:UniRef100_O53848,UniRef:UniRef50_A0A1S1N7B8,UniRef:UniRef90_R4MFT6
contig_1	Pyrodigal	gene	936467	937495	.	-	.	ID=GCA000153685_00886_gene;locus_tag=GCA000153685_00886
contig_1	Pyrodigal	CDS	936467	937495	.	-	0	ID=GCA000153685_00886;Name=HTH iclR-type domain-containing protein;locus_tag=GCA000153685_00886;product=HTH iclR-type domain-containing protein;Parent=GCA000153685_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404368.1,SO:0001217,UniParc:UPI00000D111E,UniRef:UniRef100_I6Y4Y1,UniRef:UniRef50_A0A0I9UT05,UniRef:UniRef90_A0A0I9UT05
contig_1	Pyrodigal	gene	938343	938954	.	+	.	ID=GCA000153685_00887_gene;locus_tag=GCA000153685_00887
contig_1	Pyrodigal	CDS	938343	938954	.	+	0	ID=GCA000153685_00887;Name=D-alanyl-D-alanine dipeptidase;locus_tag=GCA000153685_00887;product=D-alanyl-D-alanine dipeptidase;Parent=GCA000153685_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE45A,UniRef:UniRef100_A0A0H3L6W4,UniRef:UniRef50_A0A378SVV6,UniRef:UniRef90_A0A0H3L6W4
contig_1	Pyrodigal	gene	939041	939853	.	+	.	ID=GCA000153685_00888_gene;locus_tag=GCA000153685_00888
contig_1	Pyrodigal	CDS	939041	939853	.	+	0	ID=GCA000153685_00888;Name=UbiE/COQ5 family methlytransferase;locus_tag=GCA000153685_00888;product=UbiE/COQ5 family methlytransferase;Parent=GCA000153685_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404373.1,SO:0001217,UniParc:UPI00000D5FD1,UniRef:UniRef100_I6X9X6,UniRef:UniRef50_Q743B4,UniRef:UniRef90_A0A0U0QWY6
contig_1	Pyrodigal	gene	939921	940781	.	-	.	ID=GCA000153685_00889_gene;locus_tag=GCA000153685_00889
contig_1	Pyrodigal	CDS	939921	940781	.	-	0	ID=GCA000153685_00889;Name=Proline iminopeptidase;locus_tag=GCA000153685_00889;product=Proline iminopeptidase;Parent=GCA000153685_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404376.1,SO:0001217,UniParc:UPI00000D5F6A,UniRef:UniRef100_A5U0M8,UniRef:UniRef50_Q743A1,UniRef:UniRef90_A5U0M8
contig_1	Pyrodigal	gene	941540	942868	.	+	.	ID=GCA000153685_00890_gene;locus_tag=GCA000153685_00890
contig_1	Pyrodigal	CDS	941540	942868	.	+	0	ID=GCA000153685_00890;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000153685_00890;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000153685_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FD3,UniRef:UniRef100_A0A0H3L6P3,UniRef:UniRef50_A0A1B4XYW3,UniRef:UniRef90_A5U0N0
contig_1	Pyrodigal	gene	942852	943856	.	+	.	ID=GCA000153685_00891_gene;locus_tag=GCA000153685_00891
contig_1	Pyrodigal	CDS	942852	943856	.	+	0	ID=GCA000153685_00891;Name=Dehydrogenase;locus_tag=GCA000153685_00891;product=Dehydrogenase;Parent=GCA000153685_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404384.1,SO:0001217,UniParc:UPI00000D5EBC,UniRef:UniRef100_A5U0N1,UniRef:UniRef50_A0A655D6G0,UniRef:UniRef90_A0A655D6G0
contig_1	Pyrodigal	gene	943920	944570	.	-	.	ID=GCA000153685_00892_gene;locus_tag=GCA000153685_00892;gene=narL
contig_1	Pyrodigal	CDS	943920	944570	.	-	0	ID=GCA000153685_00892;Name=two-component system response regulator NarL;locus_tag=GCA000153685_00892;product=two-component system response regulator NarL;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=narL;Parent=GCA000153685_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404388,COG:COG2197,COG:TK,RefSeq:WP_003404388.1,SO:0001217,UniParc:UPI00000D5EB8,UniRef:UniRef100_P9WGM5,UniRef:UniRef50_P9WGM5,UniRef:UniRef90_P9WGM5
contig_1	Pyrodigal	gene	944654	945931	.	+	.	ID=GCA000153685_00893_gene;locus_tag=GCA000153685_00893;gene=narS
contig_1	Pyrodigal	CDS	944654	945931	.	+	0	ID=GCA000153685_00893;Name=Sensor histidine kinase NarS;locus_tag=GCA000153685_00893;product=Sensor histidine kinase NarS;Dbxref=GO:0000155,GO:0005886;gene=narS;Parent=GCA000153685_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898611.1,SO:0001217,UniParc:UPI0000165259,UniRef:UniRef100_O53857,UniRef:UniRef50_O53857,UniRef:UniRef90_O53857;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	946144	947658	.	-	.	ID=GCA000153685_00894_gene;locus_tag=GCA000153685_00894;gene=mmcO
contig_1	Pyrodigal	CDS	946144	947658	.	-	0	ID=GCA000153685_00894;Name=multicopper oxidase MmcO;locus_tag=GCA000153685_00894;product=multicopper oxidase MmcO;Dbxref=GO:0004322,GO:0005507,GO:0005886,GO:0042597;gene=mmcO;Parent=GCA000153685_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404392,KEGG:K22552,RefSeq:WP_003404392.1,SO:0001217,UniParc:UPI00000D5E3C,UniRef:UniRef100_I6WZK7,UniRef:UniRef50_I6WZK7,UniRef:UniRef90_I6WZK7;ec_number=1.16.3.1
contig_1	Pyrodigal	gene	947783	948199	.	+	.	ID=GCA000153685_00895_gene;locus_tag=GCA000153685_00895;gene=lpqS
contig_1	Pyrodigal	CDS	947783	948199	.	+	0	ID=GCA000153685_00895;Name=lipoprotein LpqS;locus_tag=GCA000153685_00895;product=lipoprotein LpqS;Dbxref=GO:0005886,GO:0046688;gene=lpqS;Parent=GCA000153685_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901025,KEGG:K21608,SO:0001217,UniParc:UPI00000CCBA1,UniRef:UniRef100_Q7D962,UniRef:UniRef50_O53859,UniRef:UniRef90_O53859
contig_1	Pyrodigal	gene	948306	949520	.	+	.	ID=GCA000153685_00896_gene;locus_tag=GCA000153685_00896;gene=cysK2
contig_1	Pyrodigal	CDS	948306	949520	.	+	0	ID=GCA000153685_00896;Name=S-sulfocysteine synthase CysK2;locus_tag=GCA000153685_00896;product=S-sulfocysteine synthase CysK2;Dbxref=GO:0004124,GO:0005737,GO:0005829,GO:0006535,GO:0009274,GO:0016740,GO:0019344,GO:0030170,GO:0033847,GO:0042803,GO:0080146;gene=cysK2;Parent=GCA000153685_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009935595,SO:0001217,UniParc:UPI0000EF4810,UniRef:UniRef100_A0A0H3LAT3,UniRef:UniRef50_Q79FV4,UniRef:UniRef90_Q79FV4;ec_number=2.8.5.1
contig_1	Pyrodigal	gene	949520	950779	.	+	.	ID=GCA000153685_00897_gene;locus_tag=GCA000153685_00897
contig_1	Pyrodigal	CDS	949520	950779	.	+	0	ID=GCA000153685_00897;Name=putative MFS-type transporter Rv0849;locus_tag=GCA000153685_00897;product=putative MFS-type transporter Rv0849;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08162,RefSeq:WP_003404402.1,SO:0001217,UniParc:UPI00000D3AFB,UniRef:UniRef100_P9WJX5,UniRef:UniRef50_P9WJX5,UniRef:UniRef90_P9WJX5
contig_1	Pyrodigal	gene	950776	951108	.	+	.	ID=GCA000153685_00898_gene;locus_tag=GCA000153685_00898
contig_1	Pyrodigal	CDS	950776	951108	.	+	0	ID=GCA000153685_00898;Name=Transposase;locus_tag=GCA000153685_00898;product=Transposase;Parent=GCA000153685_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404404.1,SO:0001217,UniParc:UPI00000D5E92,UniRef:UniRef100_I6Y8X8,UniRef:UniRef50_A0A2I7W4U2,UniRef:UniRef90_A0A2I7W4U2
contig_1	Pyrodigal	gene	951105	951932	.	-	.	ID=GCA000153685_00899_gene;locus_tag=GCA000153685_00899
contig_1	Pyrodigal	CDS	951105	951932	.	-	0	ID=GCA000153685_00899;Name=Short chain dehydrogenase;locus_tag=GCA000153685_00899;product=Short chain dehydrogenase;Parent=GCA000153685_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898616.1,SO:0001217,UniParc:UPI000016525B,UniRef:UniRef100_A5U0N9,UniRef:UniRef50_Q742X5,UniRef:UniRef90_A0A655ASZ3
contig_1	Pyrodigal	gene	952125	952859	.	+	.	ID=GCA000153685_00900_gene;locus_tag=GCA000153685_00900
contig_1	Pyrodigal	CDS	952125	952859	.	+	0	ID=GCA000153685_00900;Name=Fatty-acid-CoA ligase;locus_tag=GCA000153685_00900;product=Fatty-acid-CoA ligase;Parent=GCA000153685_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002FFA1FA,UniRef:UniRef100_A0A0E8MF33,UniRef:UniRef50_A0A0H3L6X8,UniRef:UniRef90_A0A0H3L6X8
contig_1	Pyrodigal	gene	952900	954582	.	-	.	ID=GCA000153685_00901_gene;locus_tag=GCA000153685_00901;gene=pdc
contig_1	Pyrodigal	CDS	952900	954582	.	-	0	ID=GCA000153685_00901;Name=alpha-keto-acid decarboxylase;locus_tag=GCA000153685_00901;product=alpha-keto-acid decarboxylase;Dbxref=GO:0000287,GO:0000949,GO:0004737,GO:0005829,GO:0005886,GO:0030976;gene=pdc;Parent=GCA000153685_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900222,KEGG:K21431,RefSeq:WP_003900222.1,SO:0001217,UniParc:UPI00000D4FD5,UniRef:UniRef100_P9WG37,UniRef:UniRef50_P9WG37,UniRef:UniRef90_P9WG37;ec_number=4.1.1.-
contig_1	Pyrodigal	gene	954647	955090	.	+	.	ID=GCA000153685_00902_gene;locus_tag=GCA000153685_00902
contig_1	Pyrodigal	CDS	954647	955090	.	+	0	ID=GCA000153685_00902;Name=Cyclase;locus_tag=GCA000153685_00902;product=Cyclase;Parent=GCA000153685_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404412.1,SO:0001217,UniParc:UPI00000D117B,UniRef:UniRef100_I6X9Y7,UniRef:UniRef50_Q742Q1,UniRef:UniRef90_R4LVR4
contig_1	Pyrodigal	gene	955096	956175	.	+	.	ID=GCA000153685_00903_gene;locus_tag=GCA000153685_00903;gene=far
contig_1	Pyrodigal	CDS	955096	956175	.	+	0	ID=GCA000153685_00903;Name=fatty-acid-CoA racemase;locus_tag=GCA000153685_00903;product=fatty-acid-CoA racemase;gene=far;Parent=GCA000153685_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404414,RefSeq:WP_003404414.1,SO:0001217,UniParc:UPI00000D0F7A,UniRef:UniRef100_A5U0P3,UniRef:UniRef50_A0A378UUQ9,UniRef:UniRef90_A0A654T4L2
contig_1	Pyrodigal	gene	956289	956693	.	+	.	ID=GCA000153685_00904_gene;locus_tag=GCA000153685_00904
contig_1	Pyrodigal	CDS	956289	956693	.	+	0	ID=GCA000153685_00904;Name=Coenzyme Q-binding protein COQ10 START domain-containing protein;locus_tag=GCA000153685_00904;product=Coenzyme Q-binding protein COQ10 START domain-containing protein;Parent=GCA000153685_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003903201.1,SO:0001217,UniParc:UPI000016525C,UniRef:UniRef100_O53868,UniRef:UniRef50_I6Y4Z9,UniRef:UniRef90_O53868
contig_1	Pyrodigal	gene	956721	957194	.	+	.	ID=GCA000153685_00905_gene;locus_tag=GCA000153685_00905
contig_1	Pyrodigal	CDS	956721	957194	.	+	0	ID=GCA000153685_00905;Name=Cyclase;locus_tag=GCA000153685_00905;product=Cyclase;Parent=GCA000153685_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404418.1,SO:0001217,UniParc:UPI00000D2BB9,UniRef:UniRef100_I6Y4Z9,UniRef:UniRef50_I6Y4Z9,UniRef:UniRef90_I6Y4Z9
contig_1	Pyrodigal	gene	957191	958384	.	-	.	ID=GCA000153685_00906_gene;locus_tag=GCA000153685_00906;gene=dapC
contig_1	Pyrodigal	CDS	957191	958384	.	-	0	ID=GCA000153685_00906;Name=pyridoxal phosphate-dependent aminotransferase;locus_tag=GCA000153685_00906;product=pyridoxal phosphate-dependent aminotransferase;Dbxref=GO:0003824,GO:0005737,GO:0009016,GO:0009058,GO:0009089,GO:0009274,GO:0016212,GO:0030170;gene=dapC;Parent=GCA000153685_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404420.1,SO:0001217,UniParc:UPI00000D5E64,UniRef:UniRef100_P9WPZ5,UniRef:UniRef50_P9WPZ5,UniRef:UniRef90_P9WPZ5;ec_number=2.6.1.-
contig_1	Pyrodigal	gene	958541	959752	.	+	.	ID=GCA000153685_00907_gene;locus_tag=GCA000153685_00907;gene=fadA
contig_1	Pyrodigal	CDS	958541	959752	.	+	0	ID=GCA000153685_00907;Name=acetyl-CoA C-acetyltransferase;locus_tag=GCA000153685_00907;product=acetyl-CoA C-acetyltransferase;Dbxref=GO:0003985,GO:0005886,GO:0009274,GO:0016747;gene=fadA;Parent=GCA000153685_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_003404423.1,SO:0001217,UniParc:UPI0000164FBE,UniRef:UniRef100_A0A1R3XWM6,UniRef:UniRef50_O53871,UniRef:UniRef90_O53871;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	959757	961919	.	+	.	ID=GCA000153685_00908_gene;locus_tag=GCA000153685_00908;gene=fadB
contig_1	Pyrodigal	CDS	959757	961919	.	+	0	ID=GCA000153685_00908;Name=fatty oxidation protein FadB;locus_tag=GCA000153685_00908;product=fatty oxidation protein FadB;gene=fadB;Parent=GCA000153685_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404426,RefSeq:WP_003404426.1,SO:0001217,UniParc:UPI00000D4FD7,UniRef:UniRef100_A5U0P8,UniRef:UniRef50_A0A0D8I7P6,UniRef:UniRef90_Q7D952
contig_1	Pyrodigal	gene	961987	963636	.	-	.	ID=GCA000153685_00909_gene;locus_tag=GCA000153685_00909;gene=xPB
contig_1	Pyrodigal	CDS	961987	963636	.	-	0	ID=GCA000153685_00909;Name=DNA repair helicase XPB;locus_tag=GCA000153685_00909;product=DNA repair helicase XPB;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009274,GO:0009378,GO:0016787,GO:0016853,GO:0036121,GO:0061749,GO:1990518;gene=xPB;Parent=GCA000153685_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1061,COG:KL,RefSeq:WP_003913615.1,SO:0001217,UniParc:UPI0001900D99,UniRef:UniRef100_O53873,UniRef:UniRef50_O53873,UniRef:UniRef90_O53873;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	963912	966182	.	-	.	ID=GCA000153685_00910_gene;locus_tag=GCA000153685_00910
contig_1	Pyrodigal	CDS	963912	966182	.	-	0	ID=GCA000153685_00910;Name=Helicase XPB/Ssl2 N-terminal domain-containing protein;locus_tag=GCA000153685_00910;product=Helicase XPB/Ssl2 N-terminal domain-containing protein;Parent=GCA000153685_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898622.1,SO:0001217,UniParc:UPI00000CCBA3,UniRef:UniRef100_O53874,UniRef:UniRef50_I4BPC8,UniRef:UniRef90_Q7D951
contig_1	Pyrodigal	gene	966217	966450	.	+	.	ID=GCA000153685_00911_gene;locus_tag=GCA000153685_00911
contig_1	Pyrodigal	CDS	966217	966450	.	+	0	ID=GCA000153685_00911;Name=hypothetical protein;locus_tag=GCA000153685_00911;product=hypothetical protein;Parent=GCA000153685_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE463,UniRef:UniRef100_A0A0E8UJJ7,UniRef:UniRef50_A0A516NSU5,UniRef:UniRef90_I6XWF9
contig_1	Pyrodigal	gene	966460	966963	.	+	.	ID=GCA000153685_00912_gene;locus_tag=GCA000153685_00912;gene=moaC
contig_1	Pyrodigal	CDS	966460	966963	.	+	0	ID=GCA000153685_00912;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000153685_00912;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000153685_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03637,RefSeq:WP_003404544.1,SO:0001217,UniParc:UPI000012F367,UniRef:UniRef100_P9WJR7,UniRef:UniRef50_P9WJR7,UniRef:UniRef90_P9WJR7;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	966960	967442	.	+	.	ID=GCA000153685_00913_gene;locus_tag=GCA000153685_00913
contig_1	Pyrodigal	CDS	966960	967442	.	+	0	ID=GCA000153685_00913;Name=Molybdopterin biosynthesis protein;locus_tag=GCA000153685_00913;product=Molybdopterin biosynthesis protein;Parent=GCA000153685_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404549.1,SO:0001217,UniParc:UPI00000D5EC9,UniRef:UniRef100_A5U0Q3,UniRef:UniRef50_A0A3G8JLX9,UniRef:UniRef90_A0A655AVK6
contig_1	Pyrodigal	gene	967439	967864	.	+	.	ID=GCA000153685_00914_gene;locus_tag=GCA000153685_00914;gene=moaE2
contig_1	Pyrodigal	CDS	967439	967864	.	+	0	ID=GCA000153685_00914;Name=Molybdopterin synthase catalytic subunit 2;locus_tag=GCA000153685_00914;product=Molybdopterin synthase catalytic subunit 2;Dbxref=GO:0005829,GO:0006777,GO:0030366;gene=moaE2;Parent=GCA000153685_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03635,RefSeq:WP_003404552.1,SO:0001217,UniParc:UPI00000D5EF4,UniRef:UniRef100_P9WJR1,UniRef:UniRef50_P9WJR1,UniRef:UniRef90_P9WJR1;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	967882	969105	.	-	.	ID=GCA000153685_00915_gene;locus_tag=GCA000153685_00915;gene=rpfA
contig_1	Pyrodigal	CDS	967882	969105	.	-	0	ID=GCA000153685_00915;Name=resuscitation-promoting factor protein RpfA;locus_tag=GCA000153685_00915;product=resuscitation-promoting factor protein RpfA;Dbxref=GO:0005576,GO:0009372,GO:0010629,GO:0016787,GO:0042127;gene=rpfA;Parent=GCA000153685_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900223,RefSeq:WP_003900223.1,SO:0001217,UniParc:UPI0000030106,UniRef:UniRef100_P9WG31,UniRef:UniRef50_P9WG31,UniRef:UniRef90_P9WG31;ec_number=3.-.-.-
contig_1	Infernal	regulatory_region	969115	969337	2.6e-08	-	.	ID=FNJOPAJJMO_84;Name=c-di-AMP riboswitch aptamer (ydaO/yuaA leader);product=c-di-AMP riboswitch aptamer (ydaO/yuaA leader);Dbxref=RFAM:RF00379;inference=profile:Rfam:RF00379;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	969553	969831	.	-	.	ID=GCA000153685_00916_gene;locus_tag=GCA000153685_00916
contig_1	Pyrodigal	CDS	969553	969831	.	-	0	ID=GCA000153685_00916;Name=Molybdopterin synthase sulfur carrier subunit;locus_tag=GCA000153685_00916;product=Molybdopterin synthase sulfur carrier subunit;Parent=GCA000153685_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404559.1,SO:0001217,UniParc:UPI00000D5E18,UniRef:UniRef100_I6XWG2,UniRef:UniRef50_I6XWG2,UniRef:UniRef90_I6XWG2
contig_1	Pyrodigal	gene	969835	970917	.	-	.	ID=GCA000153685_00917_gene;locus_tag=GCA000153685_00917;gene=moaA
contig_1	Pyrodigal	CDS	969835	970917	.	-	0	ID=GCA000153685_00917;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000153685_00917;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000153685_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404564.1,SO:0001217,UniParc:UPI000012F2CE,UniRef:UniRef100_P9WJS1,UniRef:UniRef50_P9WJS1,UniRef:UniRef90_P9WJS1;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	970914	971303	.	-	.	ID=GCA000153685_00918_gene;locus_tag=GCA000153685_00918;gene=yccF
contig_1	Pyrodigal	CDS	970914	971303	.	-	0	ID=GCA000153685_00918;Name=YccF domain-containing protein;locus_tag=GCA000153685_00918;product=YccF domain-containing protein;gene=yccF;Parent=GCA000153685_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404566.1,SO:0001217,UniParc:UPI00000D0FC5,UniRef:UniRef100_I6Y8Z3,UniRef:UniRef50_B6IWR4,UniRef:UniRef90_I6Y8Z3
contig_1	Pyrodigal	gene	971468	971875	.	+	.	ID=GCA000153685_00919_gene;locus_tag=GCA000153685_00919
contig_1	Pyrodigal	CDS	971468	971875	.	+	0	ID=GCA000153685_00919;Name=Cold-shock domain family protein;locus_tag=GCA000153685_00919;product=Cold-shock domain family protein;Parent=GCA000153685_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03704,RefSeq:WP_003404570.1,SO:0001217,UniParc:UPI00000D5EC1,UniRef:UniRef100_A5U0Q9,UniRef:UniRef50_A0A7K0D0Q7,UniRef:UniRef90_A5U0Q9
contig_1	Pyrodigal	gene	971994	973823	.	-	.	ID=GCA000153685_00920_gene;locus_tag=GCA000153685_00920
contig_1	Pyrodigal	CDS	971994	973823	.	-	0	ID=GCA000153685_00920;Name=PE-PGRS family protein PE_PGRS15;locus_tag=GCA000153685_00920;product=PE-PGRS family protein PE_PGRS15;Parent=GCA000153685_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938284.1,SO:0001217,UniParc:UPI00000D2BBB,UniRef:UniRef100_Q79FV3,UniRef:UniRef50_A0A7I7LI96,UniRef:UniRef90_Q79FV3
contig_1	Pyrodigal	gene	974084	976036	.	+	.	ID=GCA000153685_00921_gene;locus_tag=GCA000153685_00921;gene=fadE10
contig_1	Pyrodigal	CDS	974084	976036	.	+	0	ID=GCA000153685_00921;Name=putative acyl-CoA dehydrogenase FadE10;locus_tag=GCA000153685_00921;product=putative acyl-CoA dehydrogenase FadE10;Dbxref=GO:0003995,GO:0005737,GO:0005829,GO:0005886,GO:0009274,GO:0033539,GO:0050660;gene=fadE10;Parent=GCA000153685_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898626.1,SO:0001217,UniParc:UPI0000139D90,UniRef:UniRef100_P9WQF7,UniRef:UniRef50_P9WQF7,UniRef:UniRef90_P9WQF7;ec_number=1.3.-.-
contig_1	Pyrodigal	gene	976125	977285	.	-	.	ID=GCA000153685_00922_gene;locus_tag=GCA000153685_00922
contig_1	Pyrodigal	CDS	976125	977285	.	-	0	ID=GCA000153685_00922;Name=putative protein Rv0874c;locus_tag=GCA000153685_00922;product=putative protein Rv0874c;Dbxref=GO:0005886;Parent=GCA000153685_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404586.1,SO:0001217,UniParc:UPI0000139D96,UniRef:UniRef100_P9WKR9,UniRef:UniRef50_P9WKR9,UniRef:UniRef90_P9WKR9
contig_1	Pyrodigal	gene	977483	977872	.	-	.	ID=GCA000153685_00923_gene;locus_tag=GCA000153685_00923
contig_1	Pyrodigal	CDS	977483	977872	.	-	0	ID=GCA000153685_00923;Name=DUF2771 domain-containing protein;locus_tag=GCA000153685_00923;product=DUF2771 domain-containing protein;Parent=GCA000153685_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_X8AFB9
contig_1	Pyrodigal	gene	977869	979401	.	-	.	ID=GCA000153685_00924_gene;locus_tag=GCA000153685_00924
contig_1	Pyrodigal	CDS	977869	979401	.	-	0	ID=GCA000153685_00924;Name=putative protein Rv0876c;locus_tag=GCA000153685_00924;product=putative protein Rv0876c;Dbxref=GO:0005576,GO:0005886,GO:0022857;Parent=GCA000153685_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E29F31,UniRef:UniRef100_P9WKR5,UniRef:UniRef50_P9WKR5,UniRef:UniRef90_P9WKR5
contig_1	Pyrodigal	gene	979653	980441	.	+	.	ID=GCA000153685_00925_gene;locus_tag=GCA000153685_00925
contig_1	Pyrodigal	CDS	979653	980441	.	+	0	ID=GCA000153685_00925;Name=putative protein Rv0877;locus_tag=GCA000153685_00925;product=putative protein Rv0877;Parent=GCA000153685_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404596.1,SO:0001217,UniParc:UPI0000139DA3,UniRef:UniRef100_P9WKR3,UniRef:UniRef50_P9WKR3,UniRef:UniRef90_P9WKR3
contig_1	Pyrodigal	gene	980450	981781	.	-	.	ID=GCA000153685_00926_gene;locus_tag=GCA000153685_00926;gene=pPE13
contig_1	Pyrodigal	CDS	980450	981781	.	-	0	ID=GCA000153685_00926;Name=putative PPE family protein PPE13;locus_tag=GCA000153685_00926;product=putative PPE family protein PPE13;Dbxref=GO:0005886,GO:0051701,GO:0052572;gene=pPE13;Parent=GCA000153685_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900226.1,SO:0001217,UniParc:UPI0000139DA5,UniRef:UniRef100_P9WI35,UniRef:UniRef50_P9WI35,UniRef:UniRef90_P9WI35
contig_1	Pyrodigal	gene	982059	982334	.	-	.	ID=GCA000153685_00927_gene;locus_tag=GCA000153685_00927
contig_1	Pyrodigal	CDS	982059	982334	.	-	0	ID=GCA000153685_00927;Name=putative protein Mb0903c;locus_tag=GCA000153685_00927;product=putative protein Mb0903c;Dbxref=GO:0005886;Parent=GCA000153685_00927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404603.1,SO:0001217,UniParc:UPI0000139DA8,UniRef:UniRef100_P9WKR1,UniRef:UniRef50_P9WKR1,UniRef:UniRef90_P9WKR1
contig_1	Pyrodigal	gene	982512	982943	.	+	.	ID=GCA000153685_00928_gene;locus_tag=GCA000153685_00928
contig_1	Pyrodigal	CDS	982512	982943	.	+	0	ID=GCA000153685_00928;Name=putative HTH-type transcriptional regulator Mb0904;locus_tag=GCA000153685_00928;product=putative HTH-type transcriptional regulator Mb0904;Dbxref=GO:0003677,GO:0003700;Parent=GCA000153685_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404606.1,SO:0001217,UniParc:UPI0000139DAC,UniRef:UniRef100_P9WMF1,UniRef:UniRef50_P9WMF1,UniRef:UniRef90_P9WMF1
contig_1	Pyrodigal	gene	982940	983806	.	+	.	ID=GCA000153685_00929_gene;locus_tag=GCA000153685_00929
contig_1	Pyrodigal	CDS	982940	983806	.	+	0	ID=GCA000153685_00929;Name=putative tRNA/rRNA methyltransferase Mb0905;locus_tag=GCA000153685_00929;product=putative tRNA/rRNA methyltransferase Mb0905;Dbxref=GO:0003723,GO:0006396,GO:0008173,GO:0032259;Parent=GCA000153685_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404610.1,SO:0001217,UniParc:UPI00001A8F50,UniRef:UniRef100_P9WFY2,UniRef:UniRef50_P9WFY2,UniRef:UniRef90_P9WFY2;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	983803	984087	.	+	.	ID=GCA000153685_00930_gene;locus_tag=GCA000153685_00930
contig_1	Pyrodigal	CDS	983803	984087	.	+	0	ID=GCA000153685_00930;Name=putative protein Mb0906;locus_tag=GCA000153685_00930;product=putative protein Mb0906;Dbxref=GO:0005886;Parent=GCA000153685_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404614.1,SO:0001217,UniParc:UPI0000139DB2,UniRef:UniRef100_P9WKQ9,UniRef:UniRef50_P9WKQ9,UniRef:UniRef90_P9WKQ9
contig_1	Pyrodigal	gene	984084	984845	.	-	.	ID=GCA000153685_00931_gene;locus_tag=GCA000153685_00931;gene=sepH
contig_1	Pyrodigal	CDS	984084	984845	.	-	0	ID=GCA000153685_00931;Name=septation protein SepH;locus_tag=GCA000153685_00931;product=septation protein SepH;Dbxref=GO:0051301;gene=sepH;Parent=GCA000153685_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404617.1,SO:0001217,UniParc:UPI0000139DB7,UniRef:UniRef100_P9WKQ7,UniRef:UniRef50_P9WKQ7,UniRef:UniRef90_P9WKQ7
contig_1	Pyrodigal	gene	985002	986132	.	-	.	ID=GCA000153685_00932_gene;locus_tag=GCA000153685_00932;gene=serC
contig_1	Pyrodigal	CDS	985002	986132	.	-	0	ID=GCA000153685_00932;Name=phosphoserine transaminase;locus_tag=GCA000153685_00932;product=phosphoserine transaminase;Dbxref=GO:0004648,GO:0004760,GO:0005576,GO:0005777,GO:0005886,GO:0006564,GO:0008453,GO:0008615,GO:0009058,GO:0019265,GO:0030170;gene=serC;Parent=GCA000153685_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00831,RefSeq:WP_003404623.1,SO:0001217,UniParc:UPI0000135882,UniRef:UniRef100_P9WQ73,UniRef:UniRef50_P9WQ73,UniRef:UniRef90_P9WQ73;ec_number=2.6.1.52
contig_1	Pyrodigal	gene	986340	987362	.	+	.	ID=GCA000153685_00933_gene;locus_tag=GCA000153685_00933
contig_1	Pyrodigal	CDS	986340	987362	.	+	0	ID=GCA000153685_00933;Name=putative protein Mb0909;locus_tag=GCA000153685_00933;product=putative protein Mb0909;Dbxref=GO:0005886,GO:0016491;Parent=GCA000153685_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898630.1,SO:0001217,UniParc:UPI0000164FC5,UniRef:UniRef100_P9WKQ4,UniRef:UniRef50_P9WKQ5,UniRef:UniRef90_P9WKQ5
contig_1	Pyrodigal	gene	987381	989108	.	+	.	ID=GCA000153685_00934_gene;locus_tag=GCA000153685_00934;gene=fprB
contig_1	Pyrodigal	CDS	987381	989108	.	+	0	ID=GCA000153685_00934;Name=putative ferredoxin/ferredoxin--NADP reductase;locus_tag=GCA000153685_00934;product=putative ferredoxin/ferredoxin--NADP reductase;Dbxref=GO:0004324,GO:0005886,GO:0016491,GO:0046872,GO:0051539;gene=fprB;Parent=GCA000153685_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404631.1,SO:0001217,UniParc:UPI000012ABC3,UniRef:UniRef100_P9WJI1,UniRef:UniRef50_P9WJI1,UniRef:UniRef90_P9WJI1;ec_number=1.18.1.2
contig_1	Pyrodigal	gene	989091	989549	.	-	.	ID=GCA000153685_00935_gene;locus_tag=GCA000153685_00935
contig_1	Pyrodigal	CDS	989091	989549	.	-	0	ID=GCA000153685_00935;Name=putative protein Rv0887c;locus_tag=GCA000153685_00935;product=putative protein Rv0887c;Parent=GCA000153685_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404633.1,SO:0001217,UniParc:UPI000016525E,UniRef:UniRef100_P9WKQ3,UniRef:UniRef50_P9WKQ3,UniRef:UniRef90_P9WKQ3
contig_1	Pyrodigal	gene	990252	990401	.	+	.	ID=GCA000153685_00936_gene;locus_tag=GCA000153685_00936
contig_1	Pyrodigal	CDS	990252	990401	.	+	0	ID=GCA000153685_00936;Name=hypothetical protein;locus_tag=GCA000153685_00936;product=hypothetical protein;Parent=GCA000153685_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404635.1,SO:0001217,UniParc:UPI00000D2BC0,UniRef:UniRef100_A0A0H3LDJ8,UniRef:UniRef50_A0A0H3LDJ8,UniRef:UniRef90_A0A0H3LDJ8
contig_1	Pyrodigal	gene	990811	992283	.	+	.	ID=GCA000153685_00937_gene;locus_tag=GCA000153685_00937;gene=spmT
contig_1	Pyrodigal	CDS	990811	992283	.	+	0	ID=GCA000153685_00937;Name=sphingomyelinase;locus_tag=GCA000153685_00937;product=sphingomyelinase;Dbxref=GO:0006685,GO:0006811,GO:0009279,GO:0015288,GO:0022857,GO:0044002,GO:0044179,GO:0046930,GO:0055085,GO:0061751;gene=spmT;Parent=GCA000153685_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901038,RefSeq:WP_003901038.1,SO:0001217,UniParc:UPI0000139DC6,UniRef:UniRef100_P9WKQ1,UniRef:UniRef50_P9WKQ1,UniRef:UniRef90_P9WKQ1;ec_number=3.1.4.12
contig_1	Pyrodigal	gene	992318	993439	.	-	.	ID=GCA000153685_00938_gene;locus_tag=GCA000153685_00938;gene=citA
contig_1	Pyrodigal	CDS	992318	993439	.	-	0	ID=GCA000153685_00938;Name=Putative citrate synthase 2;locus_tag=GCA000153685_00938;product=Putative citrate synthase 2;Dbxref=GO:0004108,GO:0005829,GO:0005975,GO:0006099;gene=citA;Parent=GCA000153685_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,RefSeq:WP_003898633.1,SO:0001217,UniParc:UPI0000127A31,UniRef:UniRef100_P9WPD3,UniRef:UniRef50_P9WPD3,UniRef:UniRef90_P9WPD3;ec_number=2.3.3.16
contig_1	Pyrodigal	gene	993526	996174	.	-	.	ID=GCA000153685_00939_gene;locus_tag=GCA000153685_00939
contig_1	Pyrodigal	CDS	993526	996174	.	-	0	ID=GCA000153685_00939;Name=Putative HTH-type transcriptional regulator Rv0890c;locus_tag=GCA000153685_00939;product=Putative HTH-type transcriptional regulator Rv0890c;Dbxref=GO:0003677,GO:0005829,GO:0006355,GO:0009274;Parent=GCA000153685_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03556,SO:0001217,UniParc:UPI0000164FC7,UniRef:UniRef100_P9WMG0,UniRef:UniRef50_P9WMG1,UniRef:UniRef90_P9WMG1
contig_1	Pyrodigal	gene	996176	996790	.	-	.	ID=GCA000153685_00940_gene;locus_tag=GCA000153685_00940
contig_1	Pyrodigal	CDS	996176	996790	.	-	0	ID=GCA000153685_00940;Name=Transcriptional regulator;locus_tag=GCA000153685_00940;product=Transcriptional regulator;Parent=GCA000153685_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003915876.1,SO:0001217,UniParc:UPI0001E6248C,UniRef:UniRef100_A0A0H3L7P4,UniRef:UniRef50_A0A1A0M245,UniRef:UniRef90_A0A0H3L7P4
contig_1	Pyrodigal	gene	997013	997330	.	+	.	ID=GCA000153685_00941_gene;locus_tag=GCA000153685_00941
contig_1	Pyrodigal	CDS	997013	997330	.	+	0	ID=GCA000153685_00941;Name=hypothetical protein;locus_tag=GCA000153685_00941;product=hypothetical protein;Parent=GCA000153685_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42C4,UniRef:UniRef100_A0AAX1PYK9,UniRef:UniRef50_A0A1X2LRV9,UniRef:UniRef90_A0AAX1PYK9
contig_1	Pyrodigal	gene	997389	998918	.	+	.	ID=GCA000153685_00942_gene;locus_tag=GCA000153685_00942
contig_1	Pyrodigal	CDS	997389	998918	.	+	0	ID=GCA000153685_00942;Name=putative monooxygenase Rv0892;locus_tag=GCA000153685_00942;product=putative monooxygenase Rv0892;Dbxref=GO:0004499,GO:0009274,GO:0050660,GO:0050661;Parent=GCA000153685_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE46D,UniRef:UniRef100_P9WNG1,UniRef:UniRef50_P9WNG1,UniRef:UniRef90_P9WNG1;ec_number=1.14.13.-
contig_1	Pyrodigal	gene	998896	999873	.	-	.	ID=GCA000153685_00943_gene;locus_tag=GCA000153685_00943
contig_1	Pyrodigal	CDS	998896	999873	.	-	0	ID=GCA000153685_00943;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Rv0893c;locus_tag=GCA000153685_00943;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Rv0893c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404654.1,SO:0001217,UniParc:UPI0000139DD4,UniRef:UniRef100_P9WFI1,UniRef:UniRef50_P9WFI9,UniRef:UniRef90_P9WFI1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1000174	1001283	.	+	.	ID=GCA000153685_00944_gene;locus_tag=GCA000153685_00944
contig_1	Pyrodigal	CDS	1000174	1001283	.	+	0	ID=GCA000153685_00944;Name=putative protein Mb0918;locus_tag=GCA000153685_00944;product=putative protein Mb0918;Dbxref=GO:0005524;Parent=GCA000153685_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917370.1,SO:0001217,UniParc:UPI00005EE46F,UniRef:UniRef100_P9WKP9,UniRef:UniRef50_P9WKP9,UniRef:UniRef90_P9WKP9
contig_1	Pyrodigal	gene	1001453	1002877	.	+	.	ID=GCA000153685_00945_gene;locus_tag=GCA000153685_00945
contig_1	Pyrodigal	CDS	1001453	1002877	.	+	0	ID=GCA000153685_00945;Name=Putative diacyglycerol O-acyltransferase Mb0919;locus_tag=GCA000153685_00945;product=Putative diacyglycerol O-acyltransferase Mb0919;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0019432,GO:0051701,GO:0071731;Parent=GCA000153685_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000190140C,UniRef:UniRef100_P9WKA3,UniRef:UniRef50_P9WKA3,UniRef:UniRef90_P9WKA3;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	1002828	1004345	.	+	.	ID=GCA000153685_00946_gene;locus_tag=GCA000153685_00946;gene=gltA2
contig_1	Pyrodigal	CDS	1002828	1004345	.	+	0	ID=GCA000153685_00946;Name=citrate synthase;locus_tag=GCA000153685_00946;product=citrate synthase;Dbxref=GO:0004108,GO:0005829,GO:0005886,GO:0006099,GO:0046912;gene=gltA2;Parent=GCA000153685_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,SO:0001217,UniParc:UPI0004E302F5,UniRef:UniRef100_A0A0E8MG36,UniRef:UniRef50_P9WPD5,UniRef:UniRef90_P9WPD5;ec_number=2.3.3.16
contig_1	Pyrodigal	gene	1004386	1005993	.	-	.	ID=GCA000153685_00947_gene;locus_tag=GCA000153685_00947
contig_1	Pyrodigal	CDS	1004386	1005993	.	-	0	ID=GCA000153685_00947;Name=putative protein Mb0921c;locus_tag=GCA000153685_00947;product=putative protein Mb0921c;Dbxref=GO:0005829,GO:0005886;Parent=GCA000153685_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900230.1,SO:0001217,UniParc:UPI0000139DDB,UniRef:UniRef100_P9WKP7,UniRef:UniRef50_P9WKP7,UniRef:UniRef90_P9WKP7
contig_1	Pyrodigal	gene	1006019	1006282	.	-	.	ID=GCA000153685_00948_gene;locus_tag=GCA000153685_00948
contig_1	Pyrodigal	CDS	1006019	1006282	.	-	0	ID=GCA000153685_00948;Name=putative protein Mb0922c;locus_tag=GCA000153685_00948;product=putative protein Mb0922c;Parent=GCA000153685_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404673.1,SO:0001217,UniParc:UPI0000139DDC,UniRef:UniRef100_P9WKP5,UniRef:UniRef50_P9WKP5,UniRef:UniRef90_P9WKP5
contig_1	Pyrodigal	gene	1006390	1007370	.	+	.	ID=GCA000153685_00949_gene;locus_tag=GCA000153685_00949;gene=arfA
contig_1	Pyrodigal	CDS	1006390	1007370	.	+	0	ID=GCA000153685_00949;Name=peptidoglycan-binding protein ArfA;locus_tag=GCA000153685_00949;product=peptidoglycan-binding protein ArfA;Dbxref=GO:0005576,GO:0005829,GO:0005886,GO:0006811,GO:0009274,GO:0009279,GO:0010447,GO:0015288,GO:0042834,GO:0046872,GO:0072488,GO:0075293;gene=arfA;Parent=GCA000153685_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404684,RefSeq:WP_003404684.1,SO:0001217,UniParc:UPI0000139DDD,UniRef:UniRef100_P9WIU5,UniRef:UniRef50_P9WIU5,UniRef:UniRef90_P9WIU5
contig_1	Pyrodigal	gene	1007383	1007535	.	+	.	ID=GCA000153685_00950_gene;locus_tag=GCA000153685_00950;gene=arfB
contig_1	Pyrodigal	CDS	1007383	1007535	.	+	0	ID=GCA000153685_00950;Name=putative membrane protein ArfB;locus_tag=GCA000153685_00950;product=putative membrane protein ArfB;Dbxref=GO:0005886,GO:0051701;gene=arfB;Parent=GCA000153685_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16192,RefSeq:WP_003404687.1,SO:0001217,UniParc:UPI0000139DED,UniRef:UniRef100_P9WJG7,UniRef:UniRef50_P9WJG7,UniRef:UniRef90_P9WJG7
contig_1	Pyrodigal	gene	1007535	1008062	.	+	.	ID=GCA000153685_00951_gene;locus_tag=GCA000153685_00951;gene=arfC
contig_1	Pyrodigal	CDS	1007535	1008062	.	+	0	ID=GCA000153685_00951;Name=putative membrane protein ArfC;locus_tag=GCA000153685_00951;product=putative membrane protein ArfC;Dbxref=GO:0005886,GO:0009274;gene=arfC;Parent=GCA000153685_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16193,RefSeq:WP_003404688.1,SO:0001217,UniParc:UPI0000139DEF,UniRef:UniRef100_P9WJG5,UniRef:UniRef50_P9WJG5,UniRef:UniRef90_P9WJG5
contig_1	Pyrodigal	gene	1008079	1009488	.	-	.	ID=GCA000153685_00952_gene;locus_tag=GCA000153685_00952;gene=prrB
contig_1	Pyrodigal	CDS	1008079	1009488	.	-	0	ID=GCA000153685_00952;Name=two-component system sensor histidine kinase PrrB;locus_tag=GCA000153685_00952;product=two-component system sensor histidine kinase PrrB;Dbxref=GO:0000155,GO:0000160,GO:0005524,GO:0005886,GO:0009274,GO:0042802;gene=prrB;Parent=GCA000153685_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003404689,COG:COG0642,COG:T,KEGG:K07655,SO:0001217,UniParc:UPI0000164FCB,UniRef:UniRef100_P9WGK7,UniRef:UniRef50_P9WGK7,UniRef:UniRef90_P9WGK7;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1009430	1010140	.	-	.	ID=GCA000153685_00953_gene;locus_tag=GCA000153685_00953;gene=prrA
contig_1	Pyrodigal	CDS	1009430	1010140	.	-	0	ID=GCA000153685_00953;Name=two-component system response regulator PrrA;locus_tag=GCA000153685_00953;product=two-component system response regulator PrrA;Dbxref=GO:0000156,GO:0000287,GO:0000976,GO:0005509,GO:0005829,GO:0005886,GO:0006355,GO:0032993;gene=prrA;Parent=GCA000153685_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009935658,COG:COG0745,COG:TK,KEGG:K07671,RefSeq:WP_003404690.1,SO:0001217,UniParc:UPI00000D1227,UniRef:UniRef100_P9WGM1,UniRef:UniRef50_P9WGM1,UniRef:UniRef90_P9WGM1
contig_1	Pyrodigal	gene	1010271	1011758	.	-	.	ID=GCA000153685_00954_gene;locus_tag=GCA000153685_00954;gene=accD3
contig_1	Pyrodigal	CDS	1010271	1011758	.	-	0	ID=GCA000153685_00954;Name=putative biotin-dependent acyl-coenzyme A carboxylase beta3 subunit;locus_tag=GCA000153685_00954;product=putative biotin-dependent acyl-coenzyme A carboxylase beta3 subunit;Dbxref=GO:0003989,GO:0005886,GO:0009317,GO:0016740,GO:0071768;gene=accD3;Parent=GCA000153685_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404691.1,SO:0001217,UniParc:UPI00001251BA,UniRef:UniRef100_P9WQH9,UniRef:UniRef50_P9WQH9,UniRef:UniRef90_P9WQH9;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	1011785	1012516	.	+	.	ID=GCA000153685_00955_gene;locus_tag=GCA000153685_00955;gene=echA6
contig_1	Pyrodigal	CDS	1011785	1012516	.	+	0	ID=GCA000153685_00955;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_00955;product=enoyl-CoA hydratase;Dbxref=GO:0004300,GO:0006635;gene=echA6;Parent=GCA000153685_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1024,COG:I,RefSeq:WP_003404702.1,SO:0001217,UniParc:UPI0000129B68,UniRef:UniRef100_P9WNP1,UniRef:UniRef50_P9WNP1,UniRef:UniRef90_P9WNP1;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	1012522	1013640	.	+	.	ID=GCA000153685_00956_gene;locus_tag=GCA000153685_00956
contig_1	Pyrodigal	CDS	1012522	1013640	.	+	0	ID=GCA000153685_00956;Name=putative protein Rv0906;locus_tag=GCA000153685_00956;product=putative protein Rv0906;Dbxref=GO:0005737,GO:0008270,GO:0070290;Parent=GCA000153685_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13985,RefSeq:WP_003404705.1,SO:0001217,UniParc:UPI0000139DFD,UniRef:UniRef100_P9WKP3,UniRef:UniRef50_P9WKP3,UniRef:UniRef90_P9WKP3;ec_number=3.1.4.54
contig_1	Pyrodigal	gene	1013625	1015313	.	+	.	ID=GCA000153685_00957_gene;locus_tag=GCA000153685_00957
contig_1	Pyrodigal	CDS	1013625	1015313	.	+	0	ID=GCA000153685_00957;Name=Penicillin-binding protein 4;locus_tag=GCA000153685_00957;product=Penicillin-binding protein 4;Parent=GCA000153685_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BC3,UniRef:UniRef100_A5U0U6,UniRef:UniRef50_A0A0J6VT12,UniRef:UniRef90_R4M6G2
contig_1	Pyrodigal	gene	1015310	1017703	.	+	.	ID=GCA000153685_00958_gene;locus_tag=GCA000153685_00958;gene=ctpE
contig_1	Pyrodigal	CDS	1015310	1017703	.	+	0	ID=GCA000153685_00958;Name=Calcium-transporting ATPase CtpE;locus_tag=GCA000153685_00958;product=Calcium-transporting ATPase CtpE;Dbxref=GO:0005388,GO:0005524,GO:0005886,GO:0016887,GO:0043231,GO:0046872;gene=ctpE;Parent=GCA000153685_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898639.1,SO:0001217,UniParc:UPI0000128643,UniRef:UniRef100_P9WPT1,UniRef:UniRef50_A0R3Y2,UniRef:UniRef90_P9WPT1;ec_number=7.2.2.10
contig_1	Pyrodigal	gene	1017976	1018134	.	+	.	ID=GCA000153685_00959_gene;locus_tag=GCA000153685_00959
contig_1	Pyrodigal	CDS	1017976	1018134	.	+	0	ID=GCA000153685_00959;Name=hypothetical protein;locus_tag=GCA000153685_00959;product=hypothetical protein;Parent=GCA000153685_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036370.1,SO:0001217,UniParc:UPI000169A28C,UniRef:UniRef100_UPI000169A28C,UniRef:UniRef50_A0A0H3L746,UniRef:UniRef90_A0A0H3L746
contig_1	Pyrodigal	gene	1018260	1018439	.	+	.	ID=GCA000153685_00960_gene;locus_tag=GCA000153685_00960
contig_1	Pyrodigal	CDS	1018260	1018439	.	+	0	ID=GCA000153685_00960;Name=Antitoxin Rv0909;locus_tag=GCA000153685_00960;product=Antitoxin Rv0909;Dbxref=GO:0045927;Parent=GCA000153685_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898641.1,SO:0001217,UniParc:UPI00000D11B6,UniRef:UniRef100_P9WJ07,UniRef:UniRef50_P9WJ07,UniRef:UniRef90_P9WJ07
contig_1	Pyrodigal	gene	1018445	1018879	.	+	.	ID=GCA000153685_00961_gene;locus_tag=GCA000153685_00961
contig_1	Pyrodigal	CDS	1018445	1018879	.	+	0	ID=GCA000153685_00961;Name=Toxin Rv0910;locus_tag=GCA000153685_00961;product=Toxin Rv0910;Dbxref=GO:0045926;Parent=GCA000153685_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404726.1,SO:0001217,UniParc:UPI00000D1097,UniRef:UniRef100_P9WJ05,UniRef:UniRef50_P9WJ05,UniRef:UniRef90_P9WJ05
contig_1	Pyrodigal	gene	1018977	1019750	.	+	.	ID=GCA000153685_00962_gene;locus_tag=GCA000153685_00962
contig_1	Pyrodigal	CDS	1018977	1019750	.	+	0	ID=GCA000153685_00962;Name=Conserved protein;locus_tag=GCA000153685_00962;product=Conserved protein;Parent=GCA000153685_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404735.1,SO:0001217,UniParc:UPI00000D0F8D,UniRef:UniRef100_I6XA34,UniRef:UniRef50_A1TEX3,UniRef:UniRef90_I6XA34
contig_1	Pyrodigal	gene	1019791	1020264	.	+	.	ID=GCA000153685_00963_gene;locus_tag=GCA000153685_00963
contig_1	Pyrodigal	CDS	1019791	1020264	.	+	0	ID=GCA000153685_00963;Name=Transmembrane protein;locus_tag=GCA000153685_00963;product=Transmembrane protein;Parent=GCA000153685_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A28D,UniRef:UniRef100_A5U0V1,UniRef:UniRef50_A0A1X1V2X7,UniRef:UniRef90_A0A8I0JYI1
contig_1	Pyrodigal	gene	1020399	1020629	.	-	.	ID=GCA000153685_00964_gene;locus_tag=GCA000153685_00964
contig_1	Pyrodigal	CDS	1020399	1020629	.	-	0	ID=GCA000153685_00964;Name=Glyoxalase;locus_tag=GCA000153685_00964;product=Glyoxalase;Parent=GCA000153685_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898642.1,SO:0001217,UniParc:UPI00005EE477,UniRef:UniRef100_A0A0H3L751,UniRef:UniRef50_A0A0H3L751,UniRef:UniRef90_A0A0H3L751
contig_1	Pyrodigal	gene	1020796	1022304	.	-	.	ID=GCA000153685_00965_gene;locus_tag=GCA000153685_00965
contig_1	Pyrodigal	CDS	1020796	1022304	.	-	0	ID=GCA000153685_00965;Name=Dioxygenase;locus_tag=GCA000153685_00965;product=Dioxygenase;Parent=GCA000153685_00965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404742.1,SO:0001217,UniParc:UPI00000D5EB0,UniRef:UniRef100_I6Y551,UniRef:UniRef50_A0A1A3C8A6,UniRef:UniRef90_I6Y551
contig_1	Pyrodigal	gene	1022306	1023544	.	-	.	ID=GCA000153685_00966_gene;locus_tag=GCA000153685_00966
contig_1	Pyrodigal	CDS	1022306	1023544	.	-	0	ID=GCA000153685_00966;Name=acetyl-CoA acetyltransferase;locus_tag=GCA000153685_00966;product=acetyl-CoA acetyltransferase;Dbxref=GO:0016746;Parent=GCA000153685_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900233.1,SO:0001217,UniParc:UPI0001278135,UniRef:UniRef100_UPI0001278135,UniRef:UniRef50_A0A4P7HD52,UniRef:UniRef90_A0AB33SRN4
contig_1	Pyrodigal	gene	1023637	1024908	.	-	.	ID=GCA000153685_00967_gene;locus_tag=GCA000153685_00967;gene=pPE14
contig_1	Pyrodigal	CDS	1023637	1024908	.	-	0	ID=GCA000153685_00967;Name=putative PPE family protein PPE14;locus_tag=GCA000153685_00967;product=putative PPE family protein PPE14;Dbxref=GO:0052572;gene=pPE14;Parent=GCA000153685_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900234.1,SO:0001217,UniParc:UPI0001278136,UniRef:UniRef100_UPI0001278136,UniRef:UniRef50_P9WI33,UniRef:UniRef90_P9WI33
contig_1	Pyrodigal	gene	1024923	1025222	.	-	.	ID=GCA000153685_00968_gene;locus_tag=GCA000153685_00968
contig_1	Pyrodigal	CDS	1024923	1025222	.	-	0	ID=GCA000153685_00968;Name=PE domain-containing protein;locus_tag=GCA000153685_00968;product=PE domain-containing protein;Parent=GCA000153685_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404748.1,SO:0001217,UniParc:UPI00000D5EB4,UniRef:UniRef100_I6Y936,UniRef:UniRef50_R4LVW3,UniRef:UniRef90_R4LVW3
contig_1	Pyrodigal	gene	1025666	1027447	.	+	.	ID=GCA000153685_00969_gene;locus_tag=GCA000153685_00969
contig_1	Pyrodigal	CDS	1025666	1027447	.	+	0	ID=GCA000153685_00969;Name=putative transporter Mb0941;locus_tag=GCA000153685_00969;product=putative transporter Mb0941;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02168,RefSeq:WP_003404749.1,SO:0001217,UniParc:UPI0000139E11,UniRef:UniRef100_P9WPR7,UniRef:UniRef50_P9WPR7,UniRef:UniRef90_P9WPR7
contig_1	Pyrodigal	gene	1027444	1027701	.	+	.	ID=GCA000153685_00970_gene;locus_tag=GCA000153685_00970
contig_1	Pyrodigal	CDS	1027444	1027701	.	+	0	ID=GCA000153685_00970;Name=hypothetical protein;locus_tag=GCA000153685_00970;product=hypothetical protein;Parent=GCA000153685_00970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404750.1,SO:0001217,UniParc:UPI00000D2BC7,UniRef:UniRef100_A5U0V7,UniRef:UniRef50_A5U0V7,UniRef:UniRef90_A5U0V7
contig_1	Pyrodigal	gene	1027811	1028266	.	+	.	ID=GCA000153685_00971_gene;locus_tag=GCA000153685_00971;gene=tacA
contig_1	Pyrodigal	CDS	1027811	1028266	.	+	0	ID=GCA000153685_00971;Name=Antitoxin TacA;locus_tag=GCA000153685_00971;product=Antitoxin TacA;Dbxref=GO:0006355,GO:0052572;gene=tacA;Parent=GCA000153685_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00036C92A0,UniRef:UniRef100_A0A0E7WN52,UniRef:UniRef50_O05910,UniRef:UniRef90_O05910
contig_1	Pyrodigal	gene	1028263	1028763	.	+	.	ID=GCA000153685_00972_gene;locus_tag=GCA000153685_00972;gene=tacT
contig_1	Pyrodigal	CDS	1028263	1028763	.	+	0	ID=GCA000153685_00972;Name=tRNA-acetylating toxin;locus_tag=GCA000153685_00972;product=tRNA-acetylating toxin;Dbxref=GO:0016747;gene=tacT;Parent=GCA000153685_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404756.1,SO:0001217,UniParc:UPI00000D10CB,UniRef:UniRef100_I6XA42,UniRef:UniRef50_I6XA42,UniRef:UniRef90_I6XA42;ec_number=2.3.1.-
contig_1	tRNAscan-SE	gene	1028900	1028972	.	-	.	ID=GCA000153685_00973_gene;locus_tag=GCA000153685_00973;gene=trnR
contig_1	tRNAscan-SE	tRNA	1028900	1028972	.	-	.	ID=GCA000153685_00973;Name=tRNA-Arg(cct);locus_tag=GCA000153685_00973;product=tRNA-Arg(cct);gene=trnR;anti_codon=cct;amino_acid=Arg;Parent=GCA000153685_00973_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	1029076	1030395	.	-	.	ID=GCA000153685_00974_gene;locus_tag=GCA000153685_00974;gene=tnp
contig_1	Pyrodigal	CDS	1029076	1030395	.	-	0	ID=GCA000153685_00974;Name=IS256 family IS1554 transposase;locus_tag=GCA000153685_00974;product=IS256 family IS1554 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1554,RefSeq:WP_003404757.1,SO:0001217,UniParc:UPI00000D5EDF,UniRef:UniRef100_I6Y941,UniRef:UniRef50_Q9ZG97,UniRef:UniRef90_I6Y941
contig_1	Pyrodigal	gene	1030683	1031264	.	+	.	ID=GCA000153685_00975_gene;locus_tag=GCA000153685_00975;gene=tnp
contig_1	Pyrodigal	CDS	1030683	1031264	.	+	0	ID=GCA000153685_00975;Name=IS607 family IS1535 transposase;locus_tag=GCA000153685_00975;product=IS607 family IS1535 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1535,RefSeq:WP_003404760.1,SO:0001217,UniParc:UPI00000D5E83,UniRef:UniRef100_I6WZS4,UniRef:UniRef50_A0A0D8HGU9,UniRef:UniRef90_A0AA44RKA6
contig_1	Pyrodigal	gene	1031264	1032916	.	+	.	ID=GCA000153685_00976_gene;locus_tag=GCA000153685_00976;gene=tnpB
contig_1	Pyrodigal	CDS	1031264	1032916	.	+	0	ID=GCA000153685_00976;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_00976;product=IS607 family element RNA-guided endonuclease TnpB;gene=tnpB;Parent=GCA000153685_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404761.1,SO:0001217,UniParc:UPI00000D5ECB,UniRef:UniRef100_I6Y560,UniRef:UniRef50_A0A0D8FUB2,UniRef:UniRef90_I6Y560
contig_1	Pyrodigal	gene	1033092	1034156	.	-	.	ID=GCA000153685_00977_gene;locus_tag=GCA000153685_00977
contig_1	Pyrodigal	CDS	1033092	1034156	.	-	0	ID=GCA000153685_00977;Name=Phage-related replication protein;locus_tag=GCA000153685_00977;product=Phage-related replication protein;Parent=GCA000153685_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898648.1,SO:0001217,UniParc:UPI00000D0F98,UniRef:UniRef100_I6XWK6,UniRef:UniRef50_A0A051TRF2,UniRef:UniRef90_I6XWK6
contig_1	Pyrodigal	gene	1034157	1035443	.	-	.	ID=GCA000153685_00978_gene;locus_tag=GCA000153685_00978;gene=mntH
contig_1	Pyrodigal	CDS	1034157	1035443	.	-	0	ID=GCA000153685_00978;Name=Nramp family divalent metal transporter;locus_tag=GCA000153685_00978;product=Nramp family divalent metal transporter;Dbxref=GO:0005384,GO:0005886,GO:0006828,GO:0015086,GO:0015293,GO:0016020,GO:0022857,GO:0034755,GO:0046872,GO:0055085,GO:0071421,GO:0071578;gene=mntH;Parent=GCA000153685_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898649.1,SO:0001217,UniParc:UPI000012F2BD,UniRef:UniRef100_P9WIZ5,UniRef:UniRef50_P9WIZ5,UniRef:UniRef90_P9WIZ5
contig_1	Pyrodigal	gene	1035475	1036212	.	-	.	ID=GCA000153685_00979_gene;locus_tag=GCA000153685_00979
contig_1	Pyrodigal	CDS	1035475	1036212	.	-	0	ID=GCA000153685_00979;Name=NADPH-dependent FMN reductase-like domain-containing protein;locus_tag=GCA000153685_00979;product=NADPH-dependent FMN reductase-like domain-containing protein;Parent=GCA000153685_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404764.1,SO:0001217,UniParc:UPI00000D111F,UniRef:UniRef100_I6Y946,UniRef:UniRef50_E4TLU1,UniRef:UniRef90_R4M546
contig_1	Pyrodigal	gene	1036289	1037365	.	-	.	ID=GCA000153685_00980_gene;locus_tag=GCA000153685_00980
contig_1	Pyrodigal	CDS	1036289	1037365	.	-	0	ID=GCA000153685_00980;Name=2%2C4-diaminopentanoate dehydrogenase C-terminal domain-containing protein;locus_tag=GCA000153685_00980;product=2%2C4-diaminopentanoate dehydrogenase C-terminal domain-containing protein;Parent=GCA000153685_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404767.1,SO:0001217,UniParc:UPI00000D10B5,UniRef:UniRef100_I6WZS8,UniRef:UniRef50_I7GBJ4,UniRef:UniRef90_I6WZS8
contig_1	Pyrodigal	gene	1037419	1038210	.	-	.	ID=GCA000153685_00981_gene;locus_tag=GCA000153685_00981
contig_1	Pyrodigal	CDS	1037419	1038210	.	-	0	ID=GCA000153685_00981;Name=SDR family oxidoreductase;locus_tag=GCA000153685_00981;product=SDR family oxidoreductase;Dbxref=GO:0005886,GO:0016491,GO:0052167;Parent=GCA000153685_00981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404769.1,SO:0001217,UniParc:UPI00000D5EDE,UniRef:UniRef100_P9WGQ5,UniRef:UniRef50_P9WGQ5,UniRef:UniRef90_P9WGQ5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1038482	1039594	.	+	.	ID=GCA000153685_00982_gene;locus_tag=GCA000153685_00982;gene=pstS
contig_1	Pyrodigal	CDS	1038482	1039594	.	+	0	ID=GCA000153685_00982;Name=phosphate ABC transporter substrate-binding protein PstS;locus_tag=GCA000153685_00982;product=phosphate ABC transporter substrate-binding protein PstS;Dbxref=GO:0005576,GO:0005886,GO:0006817,GO:0009274,GO:0015415,GO:0016036,GO:0035435,GO:0042301,GO:0043190,GO:0051301,GO:0051701,GO:0052170;gene=pstS;Parent=GCA000153685_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404775.1,SO:0001217,UniParc:UPI0000132820,UniRef:UniRef100_P9WGT7,UniRef:UniRef50_P9WGT7,UniRef:UniRef90_P9WGT7
contig_1	Pyrodigal	gene	1039607	1040581	.	+	.	ID=GCA000153685_00983_gene;locus_tag=GCA000153685_00983;gene=pstC
contig_1	Pyrodigal	CDS	1039607	1040581	.	+	0	ID=GCA000153685_00983;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000153685_00983;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0051701,GO:0055052;gene=pstC;Parent=GCA000153685_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404779.1,SO:0001217,UniParc:UPI0000132774,UniRef:UniRef100_P9WG05,UniRef:UniRef50_P9WG05,UniRef:UniRef90_P9WG05
contig_1	Pyrodigal	gene	1040578	1041492	.	+	.	ID=GCA000153685_00984_gene;locus_tag=GCA000153685_00984;gene=pstA
contig_1	Pyrodigal	CDS	1040578	1041492	.	+	0	ID=GCA000153685_00984;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000153685_00984;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0035435,GO:0051701,GO:0055052;gene=pstA;Parent=GCA000153685_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898651.1,SO:0001217,UniParc:UPI0000164FCF,UniRef:UniRef100_P9WG10,UniRef:UniRef50_P9WG11,UniRef:UniRef90_P9WG11
contig_1	Pyrodigal	gene	1041499	1043493	.	-	.	ID=GCA000153685_00985_gene;locus_tag=GCA000153685_00985;gene=pknD
contig_1	Pyrodigal	CDS	1041499	1043493	.	-	0	ID=GCA000153685_00985;Name=Serine/threonine-protein kinase PknD;locus_tag=GCA000153685_00985;product=Serine/threonine-protein kinase PknD;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0009274,GO:0016036,GO:0030145,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045717,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknD;Parent=GCA000153685_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404782.1,SO:0001217,UniParc:UPI0000131B79,UniRef:UniRef100_P9WI79,UniRef:UniRef50_P9WI79,UniRef:UniRef90_P9WI79;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1043515	1044627	.	-	.	ID=GCA000153685_00986_gene;locus_tag=GCA000153685_00986;gene=pstS
contig_1	Pyrodigal	CDS	1043515	1044627	.	-	0	ID=GCA000153685_00986;Name=phosphate ABC transporter substrate-binding protein PstS;locus_tag=GCA000153685_00986;product=phosphate ABC transporter substrate-binding protein PstS;Dbxref=GO:0005576,GO:0005886,GO:0006817,GO:0015415,GO:0035435,GO:0042301,GO:0043190;gene=pstS;Parent=GCA000153685_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898652.1,SO:0001217,UniParc:UPI000013281B,UniRef:UniRef100_P9WGT9,UniRef:UniRef50_P9WGT7,UniRef:UniRef90_P9WGT9
contig_1	Pyrodigal	gene	1044843	1045673	.	+	.	ID=GCA000153685_00987_gene;locus_tag=GCA000153685_00987;gene=pstB2
contig_1	Pyrodigal	CDS	1044843	1045673	.	+	0	ID=GCA000153685_00987;Name=phosphate ABC transporter ATP-binding protein;locus_tag=GCA000153685_00987;product=phosphate ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015415,GO:0016887,GO:0035435;gene=pstB2;Parent=GCA000153685_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898653.1,SO:0001217,UniParc:UPI0000132831,UniRef:UniRef100_P9WQK9,UniRef:UniRef50_P9WQK9,UniRef:UniRef90_P9WQK9;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1045694	1046818	.	+	.	ID=GCA000153685_00988_gene;locus_tag=GCA000153685_00988;gene=pstS
contig_1	Pyrodigal	CDS	1045694	1046818	.	+	0	ID=GCA000153685_00988;Name=phosphate ABC transporter substrate-binding protein PstS;locus_tag=GCA000153685_00988;product=phosphate ABC transporter substrate-binding protein PstS;Dbxref=GO:0005576,GO:0005829,GO:0005886,GO:0006817,GO:0007155,GO:0009274,GO:0009986,GO:0015415,GO:0016036,GO:0035435,GO:0042301,GO:0043190;gene=pstS;Parent=GCA000153685_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900236.1,SO:0001217,UniParc:UPI000011DC80,UniRef:UniRef100_P9WGU1,UniRef:UniRef50_P9WGU1,UniRef:UniRef90_P9WGU1
contig_1	Pyrodigal	gene	1046878	1047894	.	+	.	ID=GCA000153685_00989_gene;locus_tag=GCA000153685_00989;gene=pstC
contig_1	Pyrodigal	CDS	1046878	1047894	.	+	0	ID=GCA000153685_00989;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000153685_00989;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstC;Parent=GCA000153685_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404792.1,SO:0001217,UniParc:UPI0000132773,UniRef:UniRef100_P9WG07,UniRef:UniRef50_P9WG07,UniRef:UniRef90_P9WG07
contig_1	Pyrodigal	gene	1047896	1048801	.	+	.	ID=GCA000153685_00990_gene;locus_tag=GCA000153685_00990;gene=pstA
contig_1	Pyrodigal	CDS	1047896	1048801	.	+	0	ID=GCA000153685_00990;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000153685_00990;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005315,GO:0005886,GO:0006817,GO:0015415,GO:0035435,GO:0055052;gene=pstA;Parent=GCA000153685_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404794.1,SO:0001217,UniParc:UPI0000132445,UniRef:UniRef100_P9WG09,UniRef:UniRef50_P9WG09,UniRef:UniRef90_P9WG09
contig_1	Pyrodigal	gene	1048778	1049599	.	-	.	ID=GCA000153685_00991_gene;locus_tag=GCA000153685_00991;gene=mku
contig_1	Pyrodigal	CDS	1048778	1049599	.	-	0	ID=GCA000153685_00991;Name=Ku protein;locus_tag=GCA000153685_00991;product=Ku protein;Dbxref=GO:0003690,GO:0006303,GO:0006310,GO:0033202,GO:0042803,GO:0045027,GO:0051351;gene=mku;Parent=GCA000153685_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10979,RefSeq:WP_003404795.1,SO:0001217,UniParc:UPI00000D1192,UniRef:UniRef100_P9WKD9,UniRef:UniRef50_P9WKD9,UniRef:UniRef90_P9WKD9
contig_1	Pyrodigal	gene	1049715	1051994	.	+	.	ID=GCA000153685_00992_gene;locus_tag=GCA000153685_00992;gene=ligD
contig_1	Pyrodigal	CDS	1049715	1051994	.	+	0	ID=GCA000153685_00992;Name=ATP-dependent DNA ligase;locus_tag=GCA000153685_00992;product=ATP-dependent DNA ligase;Dbxref=GO:0000166,GO:0000287,GO:0003677,GO:0003887,GO:0003896,GO:0003899,GO:0003909,GO:0003910,GO:0005524,GO:0005886,GO:0006266,GO:0006269,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0008310,GO:0030145,GO:0032553,GO:0046872;gene=ligD;Parent=GCA000153685_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01971,RefSeq:WP_003900238.1,SO:0001217,UniParc:UPI0001278168,UniRef:UniRef100_UPI0001278168,UniRef:UniRef50_P9WNV3,UniRef:UniRef90_P9WNV3;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	1051991	1053925	.	+	.	ID=GCA000153685_00993_gene;locus_tag=GCA000153685_00993
contig_1	Pyrodigal	CDS	1051991	1053925	.	+	0	ID=GCA000153685_00993;Name=putative bifunctional enzyme: 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase) + cyclase/dehydrase;locus_tag=GCA000153685_00993;product=putative bifunctional enzyme: 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase) + cyclase/dehydrase;Parent=GCA000153685_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05555,RefSeq:WP_003404801.1,SO:0001217,UniParc:UPI00000D5F36,UniRef:UniRef100_O86346,UniRef:UniRef50_A0A5S9N0P8,UniRef:UniRef90_O86346;ec_number=4.-.-.-
contig_1	Pyrodigal	gene	1054172	1055038	.	-	.	ID=GCA000153685_00994_gene;locus_tag=GCA000153685_00994
contig_1	Pyrodigal	CDS	1054172	1055038	.	-	0	ID=GCA000153685_00994;Name=putative protein Mb0965c;locus_tag=GCA000153685_00994;product=putative protein Mb0965c;Dbxref=GO:0016705;Parent=GCA000153685_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404819.1,SO:0001217,UniParc:UPI0000139E44,UniRef:UniRef100_P9WKP1,UniRef:UniRef50_P9WKP1,UniRef:UniRef90_P9WKP1
contig_1	Pyrodigal	gene	1055123	1055887	.	-	.	ID=GCA000153685_00995_gene;locus_tag=GCA000153685_00995
contig_1	Pyrodigal	CDS	1055123	1055887	.	-	0	ID=GCA000153685_00995;Name=STAS domain-containing protein;locus_tag=GCA000153685_00995;product=STAS domain-containing protein;Parent=GCA000153685_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002178679,UniRef:UniRef100_A0A0H3L7T6,UniRef:UniRef50_P71568,UniRef:UniRef90_P71568
contig_1	Pyrodigal	gene	1056275	1057315	.	-	.	ID=GCA000153685_00996_gene;locus_tag=GCA000153685_00996
contig_1	Pyrodigal	CDS	1056275	1057315	.	-	0	ID=GCA000153685_00996;Name=putative protein Mb0968c;locus_tag=GCA000153685_00996;product=putative protein Mb0968c;Dbxref=GO:0005886;Parent=GCA000153685_00996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898656.1,SO:0001217,UniParc:UPI0000139E51,UniRef:UniRef100_P9WKN7,UniRef:UniRef50_P9WKN7,UniRef:UniRef90_P9WKN7
contig_1	Pyrodigal	gene	1057344	1057820	.	+	.	ID=GCA000153685_00997_gene;locus_tag=GCA000153685_00997;gene=fpg2
contig_1	Pyrodigal	CDS	1057344	1057820	.	+	0	ID=GCA000153685_00997;Name=putative formamidopyrimidine-DNA glycosylase-like protein;locus_tag=GCA000153685_00997;product=putative formamidopyrimidine-DNA glycosylase-like protein;Dbxref=GO:0003906,GO:0004519,GO:0005886,GO:0006281,GO:0006289,GO:0008270,GO:0009274,GO:0016799,GO:0034599;gene=fpg2;Parent=GCA000153685_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404828.1,SO:0001217,UniParc:UPI0000165262,UniRef:UniRef100_L0T864,UniRef:UniRef50_L0T864,UniRef:UniRef90_L0T864
contig_1	Pyrodigal	gene	1057826	1058587	.	+	.	ID=GCA000153685_00998_gene;locus_tag=GCA000153685_00998
contig_1	Pyrodigal	CDS	1057826	1058587	.	+	0	ID=GCA000153685_00998;Name=SDR family oxidoreductase;locus_tag=GCA000153685_00998;product=SDR family oxidoreductase;Dbxref=GO:0016020,GO:0016491;Parent=GCA000153685_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898658.1,SO:0001217,UniParc:UPI0000139E59,UniRef:UniRef100_P9WGR7,UniRef:UniRef50_P9WGR7,UniRef:UniRef90_P9WGR7;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1058603	1060264	.	-	.	ID=GCA000153685_00999_gene;locus_tag=GCA000153685_00999;gene=pgi
contig_1	Pyrodigal	CDS	1058603	1060264	.	-	0	ID=GCA000153685_00999;Name=glucose-6-phosphate isomerase;locus_tag=GCA000153685_00999;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0005886,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000153685_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404830.1,SO:0001217,UniParc:UPI000012AF62,UniRef:UniRef100_P9WN69,UniRef:UniRef50_P9WN69,UniRef:UniRef90_P9WN69;ec_number=5.3.1.9
contig_1	Pyrodigal	gene	1061225	1061497	.	-	.	ID=GCA000153685_01000_gene;locus_tag=GCA000153685_01000
contig_1	Pyrodigal	CDS	1061225	1061497	.	-	0	ID=GCA000153685_01000;Name=chorismate mutase;locus_tag=GCA000153685_01000;product=chorismate mutase;Dbxref=GO:0004106,GO:0005737,GO:0005886,GO:0008652,GO:0009095,GO:0009697,GO:0046417;Parent=GCA000153685_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE481,UniRef:UniRef100_P9WIC1,UniRef:UniRef50_P9WIC1,UniRef:UniRef90_P9WIC1;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1061839	1064154	.	+	.	ID=GCA000153685_01001_gene;locus_tag=GCA000153685_01001;gene=pcrA
contig_1	Pyrodigal	CDS	1061839	1064154	.	+	0	ID=GCA000153685_01001;Name=DNA helicase PcrA;locus_tag=GCA000153685_01001;product=DNA helicase PcrA;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005737,GO:0005829,GO:0006268,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=pcrA;Parent=GCA000153685_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404859.1,SO:0001217,UniParc:UPI0000131450,UniRef:UniRef100_P9WMQ1,UniRef:UniRef50_P9WMQ1,UniRef:UniRef90_P9WMQ1;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1064235	1065233	.	-	.	ID=GCA000153685_01002_gene;locus_tag=GCA000153685_01002
contig_1	Pyrodigal	CDS	1064235	1065233	.	-	0	ID=GCA000153685_01002;Name=Peptidase M23 domain-containing protein;locus_tag=GCA000153685_01002;product=Peptidase M23 domain-containing protein;Parent=GCA000153685_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404862.1,SO:0001217,UniParc:UPI00000D11FC,UniRef:UniRef100_P71560,UniRef:UniRef50_A0A1X1V3J6,UniRef:UniRef90_P71560
contig_1	Pyrodigal	gene	1065543	1066706	.	+	.	ID=GCA000153685_01003_gene;locus_tag=GCA000153685_01003;gene=sucC
contig_1	Pyrodigal	CDS	1065543	1066706	.	+	0	ID=GCA000153685_01003;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000153685_01003;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000153685_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_003898659.1,SO:0001217,UniParc:UPI00001361A3,UniRef:UniRef100_P9WGC5,UniRef:UniRef50_P9WGC5,UniRef:UniRef90_P9WGC5;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1066728	1067630	.	+	.	ID=GCA000153685_01004_gene;locus_tag=GCA000153685_01004;gene=sucD
contig_1	Pyrodigal	CDS	1066728	1067630	.	+	0	ID=GCA000153685_01004;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000153685_01004;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0005829,GO:0005886,GO:0006099,GO:0009274,GO:0009361;gene=sucD;Parent=GCA000153685_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009935735.1,SO:0001217,UniParc:UPI00005EE482,UniRef:UniRef100_P9WGC7,UniRef:UniRef50_P9WGC7,UniRef:UniRef90_P9WGC7;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1067693	1068541	.	-	.	ID=GCA000153685_01005_gene;locus_tag=GCA000153685_01005
contig_1	Pyrodigal	CDS	1067693	1068541	.	-	0	ID=GCA000153685_01005;Name=putative protein Rv0953c;locus_tag=GCA000153685_01005;product=putative protein Rv0953c;Dbxref=GO:0016705;Parent=GCA000153685_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404873.1,SO:0001217,UniParc:UPI0000139E6B,UniRef:UniRef100_P9WKN5,UniRef:UniRef50_P9WKN5,UniRef:UniRef90_P9WKN5
contig_1	Pyrodigal	gene	1068706	1069617	.	+	.	ID=GCA000153685_01006_gene;locus_tag=GCA000153685_01006
contig_1	Pyrodigal	CDS	1068706	1069617	.	+	0	ID=GCA000153685_01006;Name=34 kDa antigenic -like protein;locus_tag=GCA000153685_01006;product=34 kDa antigenic -like protein;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404875.1,SO:0001217,UniParc:UPI0000124EC3,UniRef:UniRef100_P9WIR9,UniRef:UniRef50_P9WIR9,UniRef:UniRef90_P9WIR9
contig_1	Pyrodigal	gene	1069666	1071024	.	+	.	ID=GCA000153685_01007_gene;locus_tag=GCA000153685_01007
contig_1	Pyrodigal	CDS	1069666	1071024	.	+	0	ID=GCA000153685_01007;Name=putative protein Rv0955;locus_tag=GCA000153685_01007;product=putative protein Rv0955;Dbxref=GO:0005886;Parent=GCA000153685_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169CD70,UniRef:UniRef100_A0A0E7ZNI2,UniRef:UniRef50_P9WKN3,UniRef:UniRef90_P9WKN3
contig_1	Pyrodigal	gene	1071140	1071787	.	+	.	ID=GCA000153685_01008_gene;locus_tag=GCA000153685_01008;gene=purN
contig_1	Pyrodigal	CDS	1071140	1071787	.	+	0	ID=GCA000153685_01008;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000153685_01008;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0000287,GO:0004644,GO:0005737,GO:0005829,GO:0006189,GO:0046653;gene=purN;Parent=GCA000153685_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898661.1,SO:0001217,UniParc:UPI00000D120D,UniRef:UniRef100_P9WHM5,UniRef:UniRef50_P9WHM5,UniRef:UniRef90_P9WHM5;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	1071784	1073355	.	+	.	ID=GCA000153685_01009_gene;locus_tag=GCA000153685_01009;gene=purH
contig_1	Pyrodigal	CDS	1071784	1073355	.	+	0	ID=GCA000153685_01009;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000153685_01009;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003824,GO:0003937,GO:0004643,GO:0005829,GO:0005886,GO:0006164,GO:0006189;gene=purH;Parent=GCA000153685_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00602,RefSeq:WP_003404890.1,SO:0001217,UniParc:UPI0000132ADA,UniRef:UniRef100_P9WHM7,UniRef:UniRef50_P9WHM7,UniRef:UniRef90_P9WHM7;ec_number=3.5.4.10
contig_1	Pyrodigal	gene	1073462	1074841	.	+	.	ID=GCA000153685_01010_gene;locus_tag=GCA000153685_01010;gene=chlI
contig_1	Pyrodigal	CDS	1073462	1074841	.	+	0	ID=GCA000153685_01010;Name=Magnesium-chelatase subunit;locus_tag=GCA000153685_01010;product=Magnesium-chelatase subunit;gene=chlI;Parent=GCA000153685_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1239,COG:H,RefSeq:WP_003404892.1,SO:0001217,UniParc:UPI0000164FD5,UniRef:UniRef100_A0A1R3XWY0,UniRef:UniRef50_A4FBU6,UniRef:UniRef90_A0A3S4BYZ4
contig_1	Pyrodigal	gene	1074834	1076852	.	+	.	ID=GCA000153685_01011_gene;locus_tag=GCA000153685_01011
contig_1	Pyrodigal	CDS	1074834	1076852	.	+	0	ID=GCA000153685_01011;Name=putative protein Mb0984;locus_tag=GCA000153685_01011;product=putative protein Mb0984;Dbxref=GO:0005886;Parent=GCA000153685_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404895.1,SO:0001217,UniParc:UPI0000047BA5,UniRef:UniRef100_P9WKN1,UniRef:UniRef50_P9WKN1,UniRef:UniRef90_P9WKN1
contig_1	Pyrodigal	gene	1076906	1077127	.	+	.	ID=GCA000153685_01012_gene;locus_tag=GCA000153685_01012;gene=vapB9
contig_1	Pyrodigal	CDS	1076906	1077127	.	+	0	ID=GCA000153685_01012;Name=Putative antitoxin VapB9;locus_tag=GCA000153685_01012;product=Putative antitoxin VapB9;Dbxref=GO:0006355;gene=vapB9;Parent=GCA000153685_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404898.1,SO:0001217,UniParc:UPI00000D2BCB,UniRef:UniRef100_P9WJ55,UniRef:UniRef50_P9WJ55,UniRef:UniRef90_P9WJ55
contig_1	Pyrodigal	gene	1077124	1077507	.	+	.	ID=GCA000153685_01013_gene;locus_tag=GCA000153685_01013;gene=vapC9
contig_1	Pyrodigal	CDS	1077124	1077507	.	+	0	ID=GCA000153685_01013;Name=Ribonuclease VapC9;locus_tag=GCA000153685_01013;product=Ribonuclease VapC9;Dbxref=GO:0000287,GO:0004540;gene=vapC9;Parent=GCA000153685_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404903.1,SO:0001217,UniParc:UPI0000139E7D,UniRef:UniRef100_P9WFA9,UniRef:UniRef50_P9WFA9,UniRef:UniRef90_P9WFA9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1077653	1078000	.	+	.	ID=GCA000153685_01014_gene;locus_tag=GCA000153685_01014
contig_1	Pyrodigal	CDS	1077653	1078000	.	+	0	ID=GCA000153685_01014;Name=putative protein Rv0961;locus_tag=GCA000153685_01014;product=putative protein Rv0961;Dbxref=GO:0005886;Parent=GCA000153685_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404907.1,SO:0001217,UniParc:UPI0000139E81,UniRef:UniRef100_P9WKM9,UniRef:UniRef50_P9WKM9,UniRef:UniRef90_P9WKM9
contig_1	Pyrodigal	gene	1078019	1078693	.	-	.	ID=GCA000153685_01015_gene;locus_tag=GCA000153685_01015;gene=lprP
contig_1	Pyrodigal	CDS	1078019	1078693	.	-	0	ID=GCA000153685_01015;Name=putative lipoprotein LprP;locus_tag=GCA000153685_01015;product=putative lipoprotein LprP;Dbxref=GO:0005886;gene=lprP;Parent=GCA000153685_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898662.1,SO:0001217,UniParc:UPI0000164FD7,UniRef:UniRef100_P59987,UniRef:UniRef50_P9WK39,UniRef:UniRef90_P9WK39
contig_1	Pyrodigal	gene	1078690	1078830	.	-	.	ID=GCA000153685_01016_gene;locus_tag=GCA000153685_01016
contig_1	Pyrodigal	CDS	1078690	1078830	.	-	0	ID=GCA000153685_01016;Name=PPE family protein;locus_tag=GCA000153685_01016;product=PPE family protein;Parent=GCA000153685_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404912.1,SO:0001217,UniParc:UPI00000D2BCC,UniRef:UniRef100_A0A0H3LB76,UniRef:UniRef50_R4M0E0,UniRef:UniRef90_R4M0E0
contig_1	Pyrodigal	gene	1078876	1079496	.	-	.	ID=GCA000153685_01017_gene;locus_tag=GCA000153685_01017
contig_1	Pyrodigal	CDS	1078876	1079496	.	-	0	ID=GCA000153685_01017;Name=DUF1023 domain-containing protein;locus_tag=GCA000153685_01017;product=DUF1023 domain-containing protein;Parent=GCA000153685_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456191.1,SO:0001217,UniParc:UPI00005295E6,UniRef:UniRef100_A0A0H3L7W6,UniRef:UniRef50_A0A0H3L7W6,UniRef:UniRef90_A0A0H3L7W6
contig_1	Pyrodigal	gene	1079572	1080456	.	-	.	ID=GCA000153685_01018_gene;locus_tag=GCA000153685_01018;gene=tnp
contig_1	Pyrodigal	CDS	1079572	1080456	.	-	0	ID=GCA000153685_01018;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_01018;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	1080507	1080833	.	-	.	ID=GCA000153685_01019_gene;locus_tag=GCA000153685_01019;gene=tnp
contig_1	Pyrodigal	CDS	1080507	1080833	.	-	0	ID=GCA000153685_01019;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_01019;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	1080882	1081196	.	-	.	ID=GCA000153685_01020_gene;locus_tag=GCA000153685_01020
contig_1	Pyrodigal	CDS	1080882	1081196	.	-	0	ID=GCA000153685_01020;Name=DUF1023 domain-containing protein;locus_tag=GCA000153685_01020;product=DUF1023 domain-containing protein;Parent=GCA000153685_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345043.1,SO:0001217,UniParc:UPI0002A80767,UniRef:UniRef100_A0A0T7LVB2,UniRef:UniRef50_A0A2I7W568,UniRef:UniRef90_A0A2I7W568
contig_1	Pyrodigal	gene	1081715	1082134	.	-	.	ID=GCA000153685_01021_gene;locus_tag=GCA000153685_01021
contig_1	Pyrodigal	CDS	1081715	1082134	.	-	0	ID=GCA000153685_01021;Name=putative protein Rv0965c;locus_tag=GCA000153685_01021;product=putative protein Rv0965c;Parent=GCA000153685_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404920.1,SO:0001217,UniParc:UPI0000139E8D,UniRef:UniRef100_P9WKM3,UniRef:UniRef50_P9WKM3,UniRef:UniRef90_P9WKM3
contig_1	Pyrodigal	gene	1082170	1082772	.	-	.	ID=GCA000153685_01022_gene;locus_tag=GCA000153685_01022
contig_1	Pyrodigal	CDS	1082170	1082772	.	-	0	ID=GCA000153685_01022;Name=putative protein Rv0966c;locus_tag=GCA000153685_01022;product=putative protein Rv0966c;Dbxref=GO:0005886;Parent=GCA000153685_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900243.1,SO:0001217,UniParc:UPI00005EE488,UniRef:UniRef100_P9WKM0,UniRef:UniRef50_P9WKM1,UniRef:UniRef90_P9WKM1
contig_1	Pyrodigal	gene	1082912	1083271	.	+	.	ID=GCA000153685_01023_gene;locus_tag=GCA000153685_01023;gene=csoR
contig_1	Pyrodigal	CDS	1082912	1083271	.	+	0	ID=GCA000153685_01023;Name=copper-sensing transcriptional repressor CsoR;locus_tag=GCA000153685_01023;product=copper-sensing transcriptional repressor CsoR;Dbxref=GO:0000976,GO:0001217,GO:0003677,GO:0005507,GO:0005737,GO:0005886,GO:0010272,GO:0032993,GO:0045892,GO:0046688,GO:0097077;gene=csoR;Parent=GCA000153685_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003228404,BlastRules:WP_003404935,KEGG:K21600,RefSeq:WP_003404935.1,SO:0001217,UniParc:UPI00000D109F,UniRef:UniRef100_P9WP49,UniRef:UniRef50_P9WP49,UniRef:UniRef90_P9WP49
contig_1	Pyrodigal	gene	1083328	1083624	.	+	.	ID=GCA000153685_01024_gene;locus_tag=GCA000153685_01024
contig_1	Pyrodigal	CDS	1083328	1083624	.	+	0	ID=GCA000153685_01024;Name=putative protein Mb0993;locus_tag=GCA000153685_01024;product=putative protein Mb0993;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27044,RefSeq:WP_003404939.1,SO:0001217,UniParc:UPI0000139E95,UniRef:UniRef100_P9WKL9,UniRef:UniRef50_P9WKL9,UniRef:UniRef90_P9WKL9
contig_1	Pyrodigal	gene	1083614	1085992	.	+	.	ID=GCA000153685_01025_gene;locus_tag=GCA000153685_01025;gene=ctpV
contig_1	Pyrodigal	CDS	1083614	1085992	.	+	0	ID=GCA000153685_01025;Name=putative copper-exporting P-type ATPase V;locus_tag=GCA000153685_01025;product=putative copper-exporting P-type ATPase V;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0009274,GO:0010273,GO:0016020,GO:0016887,GO:0043682,GO:0046688,GO:0055070,GO:0140581;gene=ctpV;Parent=GCA000153685_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K17686,SO:0001217,UniParc:UPI000252D291,UniRef:UniRef100_A0A0H3LB85,UniRef:UniRef50_P9WPS3,UniRef:UniRef90_P9WPS3;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	1085989	1086621	.	+	.	ID=GCA000153685_01026_gene;locus_tag=GCA000153685_01026
contig_1	Pyrodigal	CDS	1085989	1086621	.	+	0	ID=GCA000153685_01026;Name=putative protein Mb0995;locus_tag=GCA000153685_01026;product=putative protein Mb0995;Dbxref=GO:0005886;Parent=GCA000153685_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898666.1,SO:0001217,UniParc:UPI0000139E9B,UniRef:UniRef100_P9WKL7,UniRef:UniRef50_P9WKL7,UniRef:UniRef90_P9WKL7
contig_1	Pyrodigal	gene	1086712	1087521	.	-	.	ID=GCA000153685_01027_gene;locus_tag=GCA000153685_01027
contig_1	Pyrodigal	CDS	1086712	1087521	.	-	0	ID=GCA000153685_01027;Name=enoyl-CoA hydratase family protein;locus_tag=GCA000153685_01027;product=enoyl-CoA hydratase family protein;Parent=GCA000153685_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404949.1,SO:0001217,UniParc:UPI00000D121F,UniRef:UniRef100_A5U112,UniRef:UniRef50_A0A498R2G2,UniRef:UniRef90_A5U112
contig_1	Pyrodigal	gene	1087521	1088687	.	-	.	ID=GCA000153685_01028_gene;locus_tag=GCA000153685_01028;gene=fadE12
contig_1	Pyrodigal	CDS	1087521	1088687	.	-	0	ID=GCA000153685_01028;Name=Acyl-CoA dehydrogenase FadE12;locus_tag=GCA000153685_01028;product=Acyl-CoA dehydrogenase FadE12;Dbxref=GO:0003995,GO:0005737,GO:0005886,GO:0033539,GO:0050660;gene=fadE12;Parent=GCA000153685_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898667.1,SO:0001217,UniParc:UPI00001251E1,UniRef:UniRef100_P9WQG3,UniRef:UniRef50_P9WQG3,UniRef:UniRef90_P9WQG3;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	1088684	1090687	.	-	.	ID=GCA000153685_01029_gene;locus_tag=GCA000153685_01029
contig_1	Pyrodigal	CDS	1088684	1090687	.	-	0	ID=GCA000153685_01029;Name=Acetyl-/propionyl-coenzyme A carboxylasesubunit alpha;locus_tag=GCA000153685_01029;product=Acetyl-/propionyl-coenzyme A carboxylasesubunit alpha;Parent=GCA000153685_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27596,RefSeq:WP_003900244.1,SO:0001217,UniParc:UPI00000D123B,UniRef:UniRef100_A0A0H3L7C1,UniRef:UniRef50_A0A3G8JUN8,UniRef:UniRef90_A0A0H3L7C1;ec_number=6.4.1.-
contig_1	Pyrodigal	gene	1090693	1092288	.	-	.	ID=GCA000153685_01030_gene;locus_tag=GCA000153685_01030;gene=accD2
contig_1	Pyrodigal	CDS	1090693	1092288	.	-	0	ID=GCA000153685_01030;Name=putative biotin-dependent acyl-coenzyme A carboxylase beta2 subunit;locus_tag=GCA000153685_01030;product=putative biotin-dependent acyl-coenzyme A carboxylase beta2 subunit;Dbxref=GO:0016740,GO:0016874,GO:0071768;gene=accD2;Parent=GCA000153685_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4799,COG:I,SO:0001217,UniParc:UPI00000D2BCD,UniRef:UniRef100_A0A0H3LB90,UniRef:UniRef50_O86318,UniRef:UniRef90_O86318;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	1092285	1093433	.	-	.	ID=GCA000153685_01031_gene;locus_tag=GCA000153685_01031
contig_1	Pyrodigal	CDS	1092285	1093433	.	-	0	ID=GCA000153685_01031;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_01031;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898670.1,SO:0001217,UniParc:UPI00000D0FC6,UniRef:UniRef100_A5U116,UniRef:UniRef50_A0A6N7CHR0,UniRef:UniRef90_A0A655JA25
contig_1	Pyrodigal	gene	1093430	1095112	.	-	.	ID=GCA000153685_01032_gene;locus_tag=GCA000153685_01032
contig_1	Pyrodigal	CDS	1093430	1095112	.	-	0	ID=GCA000153685_01032;Name=Exopolyphosphatase;locus_tag=GCA000153685_01032;product=Exopolyphosphatase;Parent=GCA000153685_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404960.1,SO:0001217,UniParc:UPI00000D0F72,UniRef:UniRef100_O86320,UniRef:UniRef50_I7GFD8,UniRef:UniRef90_O86320
contig_1	Pyrodigal	gene	1095310	1097538	.	+	.	ID=GCA000153685_01033_gene;locus_tag=GCA000153685_01033
contig_1	Pyrodigal	CDS	1095310	1097538	.	+	0	ID=GCA000153685_01033;Name=PE_PGRS family protein;locus_tag=GCA000153685_01033;product=PE_PGRS family protein;Parent=GCA000153685_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3L732
contig_1	Pyrodigal	gene	1097495	1098082	.	+	.	ID=GCA000153685_01034_gene;locus_tag=GCA000153685_01034
contig_1	Pyrodigal	CDS	1097495	1098082	.	+	0	ID=GCA000153685_01034;Name=PE-PGRS family protein;locus_tag=GCA000153685_01034;product=PE-PGRS family protein;Parent=GCA000153685_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D293,UniRef:UniRef100_A0A0H3L7C7,UniRef:UniRef50_A0A0H3L7C7,UniRef:UniRef90_A0A0H3L7C7
contig_1	Pyrodigal	gene	1098299	1099306	.	-	.	ID=GCA000153685_01035_gene;locus_tag=GCA000153685_01035
contig_1	Pyrodigal	CDS	1098299	1099306	.	-	0	ID=GCA000153685_01035;Name=PE_PGRS family protein;locus_tag=GCA000153685_01035;product=PE_PGRS family protein;Parent=GCA000153685_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009937445.1,SO:0001217,UniParc:UPI00000D2BCE,UniRef:UniRef100_Q8VKA6,UniRef:UniRef50_Q8VKA6,UniRef:UniRef90_Q8VKA6
contig_1	Pyrodigal	gene	1099836	1100009	.	+	.	ID=GCA000153685_01036_gene;locus_tag=GCA000153685_01036;gene=rpmF
contig_1	Pyrodigal	CDS	1099836	1100009	.	+	0	ID=GCA000153685_01036;Name=50S ribosomal protein L32;locus_tag=GCA000153685_01036;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000153685_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405053.1,SO:0001217,UniParc:UPI0000133F5F,UniRef:UniRef100_P9WH99,UniRef:UniRef50_P9WH99,UniRef:UniRef90_P9WH99
contig_1	Pyrodigal	gene	1100028	1101413	.	-	.	ID=GCA000153685_01037_gene;locus_tag=GCA000153685_01037;gene=pknD
contig_1	Pyrodigal	CDS	1100028	1101413	.	-	0	ID=GCA000153685_01037;Name=Serine/threonine-protein kinase PknD;locus_tag=GCA000153685_01037;product=Serine/threonine-protein kinase PknD;gene=pknD;Parent=GCA000153685_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345046.1,SO:0001217,UniParc:UPI0002A83B48,UniRef:UniRef100_A0AA44LLH4,UniRef:UniRef50_Q79FU0,UniRef:UniRef90_A0AA44LLH4
contig_1	Pyrodigal	gene	1101778	1102470	.	+	.	ID=GCA000153685_01038_gene;locus_tag=GCA000153685_01038;gene=mprA
contig_1	Pyrodigal	CDS	1101778	1102470	.	+	0	ID=GCA000153685_01038;Name=two-component system response regulator MprA;locus_tag=GCA000153685_01038;product=two-component system response regulator MprA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=mprA;Parent=GCA000153685_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900246,COG:COG0745,COG:TK,KEGG:K07669,SO:0001217,UniParc:UPI00000D5F28,UniRef:UniRef100_P9WGM9,UniRef:UniRef50_P9WGM9,UniRef:UniRef90_P9WGM9
contig_1	Pyrodigal	gene	1102470	1103984	.	+	.	ID=GCA000153685_01039_gene;locus_tag=GCA000153685_01039;gene=mprB
contig_1	Pyrodigal	CDS	1102470	1103984	.	+	0	ID=GCA000153685_01039;Name=two-component system sensor histidine kinase MprB;locus_tag=GCA000153685_01039;product=two-component system sensor histidine kinase MprB;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886;gene=mprB;Parent=GCA000153685_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911317,COG:COG0642,COG:T,KEGG:K07653,RefSeq:WP_003911317.1,SO:0001217,UniParc:UPI00000D5E66,UniRef:UniRef100_P9WGL1,UniRef:UniRef50_P9WGL1,UniRef:UniRef90_P9WGL1;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	1104028	1105422	.	+	.	ID=GCA000153685_01040_gene;locus_tag=GCA000153685_01040;gene=pepD
contig_1	Pyrodigal	CDS	1104028	1105422	.	+	0	ID=GCA000153685_01040;Name=serine protease PepD;locus_tag=GCA000153685_01040;product=serine protease PepD;Dbxref=GO:0004252,GO:0005576,GO:0005886,GO:0006508,GO:0008236,GO:0030163,GO:0071236;gene=pepD;Parent=GCA000153685_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886101,RefSeq:WP_003901059.1,SO:0001217,UniParc:UPI00001A8F6B,UniRef:UniRef100_Q8VKA4,UniRef:UniRef50_O53896,UniRef:UniRef90_O53896;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	1105422	1105967	.	+	.	ID=GCA000153685_01041_gene;locus_tag=GCA000153685_01041;gene=moaB
contig_1	Pyrodigal	CDS	1105422	1105967	.	+	0	ID=GCA000153685_01041;Name=MoaB/Mog domain-containing protein;locus_tag=GCA000153685_01041;product=MoaB/Mog domain-containing protein;gene=moaB;Parent=GCA000153685_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_003405127.1,SO:0001217,UniParc:UPI0000165264,UniRef:UniRef100_O53897,UniRef:UniRef50_O53897,UniRef:UniRef90_O53897
contig_1	Pyrodigal	gene	1105987	1106442	.	-	.	ID=GCA000153685_01042_gene;locus_tag=GCA000153685_01042;gene=mscL
contig_1	Pyrodigal	CDS	1105987	1106442	.	-	0	ID=GCA000153685_01042;Name=large-conductance mechanosensitive channel protein MscL;locus_tag=GCA000153685_01042;product=large-conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0008381,GO:0016020,GO:0034220;gene=mscL;Parent=GCA000153685_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03282,RefSeq:WP_003405128.1,SO:0001217,UniParc:UPI000012F5E0,UniRef:UniRef100_P9WJN5,UniRef:UniRef50_P9WJN5,UniRef:UniRef90_P9WJN5
contig_1	Pyrodigal	gene	1106765	1107511	.	+	.	ID=GCA000153685_01043_gene;locus_tag=GCA000153685_01043
contig_1	Pyrodigal	CDS	1106765	1107511	.	+	0	ID=GCA000153685_01043;Name=putative ABC transporter ATP-binding protein Rv0986;locus_tag=GCA000153685_01043;product=putative ABC transporter ATP-binding protein Rv0986;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0052572,GO:0055085;Parent=GCA000153685_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900248.1,SO:0001217,UniParc:UPI0000139EBC,UniRef:UniRef100_P9WQK1,UniRef:UniRef50_P9WQK1,UniRef:UniRef90_P9WQK1
contig_1	Pyrodigal	gene	1107621	1110071	.	+	.	ID=GCA000153685_01044_gene;locus_tag=GCA000153685_01044
contig_1	Pyrodigal	CDS	1107621	1110071	.	+	0	ID=GCA000153685_01044;Name=putative ABC transporter permease protein Rv0987;locus_tag=GCA000153685_01044;product=putative ABC transporter permease protein Rv0987;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00040DB4D3,UniRef:UniRef100_A0A0E8NXC9,UniRef:UniRef50_O53900,UniRef:UniRef90_O53900
contig_1	Pyrodigal	gene	1110078	1111238	.	+	.	ID=GCA000153685_01045_gene;locus_tag=GCA000153685_01045;gene=attH
contig_1	Pyrodigal	CDS	1110078	1111238	.	+	0	ID=GCA000153685_01045;Name=AttH domain-containing protein;locus_tag=GCA000153685_01045;product=AttH domain-containing protein;gene=attH;Parent=GCA000153685_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898675.1,SO:0001217,UniParc:UPI00000D0FA5,UniRef:UniRef100_O86370,UniRef:UniRef50_A0A3M1ZTB5,UniRef:UniRef90_A0A8I0ELK2
contig_1	Pyrodigal	gene	1111367	1112344	.	-	.	ID=GCA000153685_01046_gene;locus_tag=GCA000153685_01046;gene=grcC
contig_1	Pyrodigal	CDS	1111367	1112344	.	-	0	ID=GCA000153685_01046;Name=polyprenyl-diphosphate synthase GrcC;locus_tag=GCA000153685_01046;product=polyprenyl-diphosphate synthase GrcC;Dbxref=GO:0004161,GO:0004659,GO:0008299,GO:0033384,GO:0046872;gene=grcC;Parent=GCA000153685_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003402957,BlastRules:WP_010886102,RefSeq:WP_003405136.1,SO:0001217,UniParc:UPI00001A8F70,UniRef:UniRef100_A0A0H3L7E0,UniRef:UniRef50_O05572,UniRef:UniRef90_O05572;ec_number=2.5.1.1
contig_1	Pyrodigal	gene	1112405	1113061	.	-	.	ID=GCA000153685_01047_gene;locus_tag=GCA000153685_01047
contig_1	Pyrodigal	CDS	1112405	1113061	.	-	0	ID=GCA000153685_01047;Name=SAF domain-containing protein;locus_tag=GCA000153685_01047;product=SAF domain-containing protein;Parent=GCA000153685_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02279,RefSeq:WP_003898677.1,SO:0001217,UniParc:UPI00000D100C,UniRef:UniRef100_O05573,UniRef:UniRef50_F5YTB0,UniRef:UniRef90_O05573
contig_1	Pyrodigal	gene	1113134	1113466	.	-	.	ID=GCA000153685_01048_gene;locus_tag=GCA000153685_01048
contig_1	Pyrodigal	CDS	1113134	1113466	.	-	0	ID=GCA000153685_01048;Name=Conserved serine rich protein;locus_tag=GCA000153685_01048;product=Conserved serine rich protein;Parent=GCA000153685_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405142.1,SO:0001217,UniParc:UPI0000165265,UniRef:UniRef100_O05574,UniRef:UniRef50_A0A917B3M8,UniRef:UniRef90_O05574
contig_1	Pyrodigal	gene	1113540	1114127	.	-	.	ID=GCA000153685_01049_gene;locus_tag=GCA000153685_01049
contig_1	Pyrodigal	CDS	1113540	1114127	.	-	0	ID=GCA000153685_01049;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000153685_01049;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0006730,GO:0030272;Parent=GCA000153685_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000164FDF,UniRef:UniRef100_O05575,UniRef:UniRef50_O05575,UniRef:UniRef90_O05575;ec_number=6.3.3.2
contig_1	Pyrodigal	gene	1114234	1115154	.	+	.	ID=GCA000153685_01050_gene;locus_tag=GCA000153685_01050
contig_1	Pyrodigal	CDS	1114234	1115154	.	+	0	ID=GCA000153685_01050;Name=UTP--glucose-1-phosphate uridylyltransferase;locus_tag=GCA000153685_01050;product=UTP--glucose-1-phosphate uridylyltransferase;Parent=GCA000153685_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00963,RefSeq:WP_003405145.1,SO:0001217,UniParc:UPI0000164FE0,UniRef:UniRef100_A0A1R3XX25,UniRef:UniRef50_O05576,UniRef:UniRef90_O05576;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	1115231	1116511	.	+	.	ID=GCA000153685_01051_gene;locus_tag=GCA000153685_01051;gene=glp
contig_1	Pyrodigal	CDS	1115231	1116511	.	+	0	ID=GCA000153685_01051;Name=gephyrin-like molybdotransferase Glp;locus_tag=GCA000153685_01051;product=gephyrin-like molybdotransferase Glp;Dbxref=GO:0005737,GO:0005829,GO:0005886,GO:0006777,GO:0046872,GO:0061599,GO:1990586;gene=glp;Parent=GCA000153685_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898680.1,SO:0001217,UniParc:UPI000012F38D,UniRef:UniRef100_P9WJQ7,UniRef:UniRef50_P9WJQ7,UniRef:UniRef90_P9WJQ7;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	1116574	1117185	.	+	.	ID=GCA000153685_01052_gene;locus_tag=GCA000153685_01052
contig_1	Pyrodigal	CDS	1116574	1117185	.	+	0	ID=GCA000153685_01052;Name=[ribosomal protein uS5]-alanine N-acetyltransferase;locus_tag=GCA000153685_01052;product=[ribosomal protein uS5]-alanine N-acetyltransferase;Parent=GCA000153685_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012781D2,UniRef:UniRef100_A0A0H3LBC0,UniRef:UniRef50_A0A927PKK2,UniRef:UniRef90_A0A5R1Z7Y6
contig_1	Pyrodigal	gene	1117346	1118422	.	+	.	ID=GCA000153685_01053_gene;locus_tag=GCA000153685_01053;gene=glpR
contig_1	Pyrodigal	CDS	1117346	1118422	.	+	0	ID=GCA000153685_01053;Name=gephyrin-like molybdotransferase receptor GlpR;locus_tag=GCA000153685_01053;product=gephyrin-like molybdotransferase receptor GlpR;Dbxref=GO:1990586;gene=glpR;Parent=GCA000153685_01053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901065.1,SO:0001217,UniParc:UPI00000C14C4,UniRef:UniRef100_Q8VKA2,UniRef:UniRef50_G8RPZ3,UniRef:UniRef90_A0A8I0ELT8
contig_1	tRNAscan-SE	gene	1118473	1118548	.	+	.	ID=GCA000153685_01054_gene;locus_tag=GCA000153685_01054;gene=trnA
contig_1	tRNAscan-SE	tRNA	1118473	1118548	.	+	.	ID=GCA000153685_01054;Name=tRNA-Ala(cgc);locus_tag=GCA000153685_01054;product=tRNA-Ala(cgc);gene=trnA;anti_codon=cgc;amino_acid=Ala;Parent=GCA000153685_01054_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Pyrodigal	gene	1118823	1119074	.	+	.	ID=GCA000153685_01055_gene;locus_tag=GCA000153685_01055
contig_1	Pyrodigal	CDS	1118823	1119074	.	+	0	ID=GCA000153685_01055;Name=hypothetical protein;locus_tag=GCA000153685_01055;product=hypothetical protein;Parent=GCA000153685_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405150.1,SO:0001217,UniParc:UPI00000D2BD4,UniRef:UniRef100_A0A1R3XY17,UniRef:UniRef50_B2HDM0,UniRef:UniRef90_R4LW25
contig_1	Pyrodigal	gene	1119135	1119344	.	-	.	ID=GCA000153685_01056_gene;locus_tag=GCA000153685_01056
contig_1	Pyrodigal	CDS	1119135	1119344	.	-	0	ID=GCA000153685_01056;Name=Methyltransferase;locus_tag=GCA000153685_01056;product=Methyltransferase;Parent=GCA000153685_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405160.1,SO:0001217,UniParc:UPI00000D2BD5,UniRef:UniRef100_A0A0H3LDV9,UniRef:UniRef50_A0A0H3LDV9,UniRef:UniRef90_A0A0H3LDV9
contig_1	Pyrodigal	gene	1119761	1120711	.	+	.	ID=GCA000153685_01057_gene;locus_tag=GCA000153685_01057
contig_1	Pyrodigal	CDS	1119761	1120711	.	+	0	ID=GCA000153685_01057;Name=Acetyltransferase Pat;locus_tag=GCA000153685_01057;product=Acetyltransferase Pat;Dbxref=GO:0003700,GO:0005829,GO:0016407,GO:0016746,GO:0030552,GO:0046872;Parent=GCA000153685_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000164FE2,UniRef:UniRef100_O05581,UniRef:UniRef50_O05581,UniRef:UniRef90_O05581;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1120729	1121487	.	+	.	ID=GCA000153685_01058_gene;locus_tag=GCA000153685_01058
contig_1	Pyrodigal	CDS	1120729	1121487	.	+	0	ID=GCA000153685_01058;Name=DUF5642 domain-containing protein;locus_tag=GCA000153685_01058;product=DUF5642 domain-containing protein;Parent=GCA000153685_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405165.1,SO:0001217,UniParc:UPI00000D1078,UniRef:UniRef100_O05582,UniRef:UniRef50_O05582,UniRef:UniRef90_O05582
contig_1	Pyrodigal	gene	1121493	1122110	.	-	.	ID=GCA000153685_01059_gene;locus_tag=GCA000153685_01059
contig_1	Pyrodigal	CDS	1121493	1122110	.	-	0	ID=GCA000153685_01059;Name=Fe2OG dioxygenase domain-containing protein;locus_tag=GCA000153685_01059;product=Fe2OG dioxygenase domain-containing protein;Parent=GCA000153685_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898684.1,SO:0001217,UniParc:UPI00000D2BD6,UniRef:UniRef100_L7N6A4,UniRef:UniRef50_L7N6A4,UniRef:UniRef90_L7N6A4
contig_1	Pyrodigal	gene	1122147	1123355	.	+	.	ID=GCA000153685_01060_gene;locus_tag=GCA000153685_01060;gene=arcA
contig_1	Pyrodigal	CDS	1122147	1123355	.	+	0	ID=GCA000153685_01060;Name=arginine deiminase;locus_tag=GCA000153685_01060;product=arginine deiminase;Dbxref=GO:0005737,GO:0005886,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000153685_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405169.1,SO:0001217,UniParc:UPI0000125D93,UniRef:UniRef100_P9WQ05,UniRef:UniRef50_P9WQ05,UniRef:UniRef90_P9WQ05;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	1123390	1124958	.	-	.	ID=GCA000153685_01061_gene;locus_tag=GCA000153685_01061;gene=pmt
contig_1	Pyrodigal	CDS	1123390	1124958	.	-	0	ID=GCA000153685_01061;Name=putative dolichyl-phosphate-mannose--protein mannosyltransferase;locus_tag=GCA000153685_01061;product=putative dolichyl-phosphate-mannose--protein mannosyltransferase;Dbxref=GO:0004169,GO:0005886,GO:0035269;gene=pmt;Parent=GCA000153685_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00728,RefSeq:WP_003898685.1,SO:0001217,UniParc:UPI00005EE497,UniRef:UniRef100_P9WN05,UniRef:UniRef50_P9WN05,UniRef:UniRef90_P9WN05;ec_number=2.4.1.109
contig_1	Pyrodigal	gene	1124984	1125841	.	+	.	ID=GCA000153685_01062_gene;locus_tag=GCA000153685_01062;gene=rsmI
contig_1	Pyrodigal	CDS	1124984	1125841	.	+	0	ID=GCA000153685_01062;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA000153685_01062;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0000451,GO:0005737,GO:0005886,GO:0008649,GO:0008757,GO:0070677;gene=rsmI;Parent=GCA000153685_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07056,RefSeq:WP_003405173.1,SO:0001217,UniParc:UPI0000139EF2,UniRef:UniRef100_P9WGW7,UniRef:UniRef50_P9WGW7,UniRef:UniRef90_P9WGW7;ec_number=2.1.1.198
contig_1	Pyrodigal	gene	1125851	1127074	.	-	.	ID=GCA000153685_01063_gene;locus_tag=GCA000153685_01063
contig_1	Pyrodigal	CDS	1125851	1127074	.	-	0	ID=GCA000153685_01063;Name=Membrane protein;locus_tag=GCA000153685_01063;product=Membrane protein;Parent=GCA000153685_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE498,UniRef:UniRef100_A5U147,UniRef:UniRef50_A0A1A3KXU2,UniRef:UniRef90_R4M0I4
contig_1	Pyrodigal	gene	1127184	1128428	.	-	.	ID=GCA000153685_01064_gene;locus_tag=GCA000153685_01064
contig_1	Pyrodigal	CDS	1127184	1128428	.	-	0	ID=GCA000153685_01064;Name=aminodeoxychorismate synthase component I;locus_tag=GCA000153685_01064;product=aminodeoxychorismate synthase component I;Dbxref=GO:0009396;Parent=GCA000153685_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000315167A,UniRef:UniRef100_A0A0T9N9S4,UniRef:UniRef50_A0A0T9N9S4,UniRef:UniRef90_A0A0T9N9S4;ec_number=2.6.1.85
contig_1	Pyrodigal	gene	1128793	1130379	.	+	.	ID=GCA000153685_01065_gene;locus_tag=GCA000153685_01065
contig_1	Pyrodigal	CDS	1128793	1130379	.	+	0	ID=GCA000153685_01065;Name=Secreted protein;locus_tag=GCA000153685_01065;product=Secreted protein;Parent=GCA000153685_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE49A,UniRef:UniRef100_O05592,UniRef:UniRef50_I2A9K8,UniRef:UniRef90_O05592
contig_1	Pyrodigal	gene	1130406	1131965	.	-	.	ID=GCA000153685_01066_gene;locus_tag=GCA000153685_01066;gene=metG
contig_1	Pyrodigal	CDS	1130406	1131965	.	-	0	ID=GCA000153685_01066;Name=methionine--tRNA ligase;locus_tag=GCA000153685_01066;product=methionine--tRNA ligase;Dbxref=GO:0000049,GO:0004825,GO:0005524,GO:0005737,GO:0005886,GO:0006431;gene=metG;Parent=GCA000153685_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405183.1,SO:0001217,UniParc:UPI0000164FE4,UniRef:UniRef100_P59952,UniRef:UniRef50_P9WFU5,UniRef:UniRef90_P9WFU5;ec_number=6.1.1.10
contig_1	Pyrodigal	gene	1131985	1132845	.	+	.	ID=GCA000153685_01067_gene;locus_tag=GCA000153685_01067;gene=tatD
contig_1	Pyrodigal	CDS	1131985	1132845	.	+	0	ID=GCA000153685_01067;Name=putative metal-dependent hydrolase TatD;locus_tag=GCA000153685_01067;product=putative metal-dependent hydrolase TatD;Dbxref=GO:0004536,GO:0005829,GO:0005886,GO:0046872;gene=tatD;Parent=GCA000153685_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03424,RefSeq:WP_003898688.1,SO:0001217,UniParc:UPI0000EF47B5,UniRef:UniRef100_A0A0H3L7G3,UniRef:UniRef50_O08343,UniRef:UniRef90_O08343;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1133053	1134141	.	+	.	ID=GCA000153685_01068_gene;locus_tag=GCA000153685_01068;gene=rpfB
contig_1	Pyrodigal	CDS	1133053	1134141	.	+	0	ID=GCA000153685_01068;Name=resuscitation-promoting factor protein RpfB;locus_tag=GCA000153685_01068;product=resuscitation-promoting factor protein RpfB;Dbxref=GO:0005576,GO:0005886,GO:0009372,GO:0010628,GO:0010629,GO:0016787,GO:0042127,GO:0085016;gene=rpfB;Parent=GCA000153685_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031657245,RefSeq:WP_003405187.1,SO:0001217,UniParc:UPI0000030103,UniRef:UniRef100_P9WG29,UniRef:UniRef50_P9WG29,UniRef:UniRef90_P9WG29;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1134114	1135067	.	+	.	ID=GCA000153685_01069_gene;locus_tag=GCA000153685_01069;gene=rsmA
contig_1	Pyrodigal	CDS	1134114	1135067	.	+	0	ID=GCA000153685_01069;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA000153685_01069;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0052908;gene=rsmA;Parent=GCA000153685_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405191.1,SO:0001217,UniParc:UPI000012E0B1,UniRef:UniRef100_P9WH07,UniRef:UniRef50_P9WH07,UniRef:UniRef90_P9WH07;ec_number=2.1.1.182
contig_1	Pyrodigal	gene	1135117	1136073	.	+	.	ID=GCA000153685_01070_gene;locus_tag=GCA000153685_01070;gene=ispE
contig_1	Pyrodigal	CDS	1135117	1136073	.	+	0	ID=GCA000153685_01070;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA000153685_01070;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0005524,GO:0016114,GO:0019288,GO:0050515;gene=ispE;Parent=GCA000153685_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00919,RefSeq:WP_003898690.1,SO:0001217,UniParc:UPI00005EE49B,UniRef:UniRef100_P9WKG7,UniRef:UniRef50_P9WKG7,UniRef:UniRef90_P9WKG7;ec_number=2.7.1.148
contig_1	Pyrodigal	gene	1136587	1138221	.	+	.	ID=GCA000153685_01071_gene;locus_tag=GCA000153685_01071;gene=pks16
contig_1	Pyrodigal	CDS	1136587	1138221	.	+	0	ID=GCA000153685_01071;Name=Putative ligase Rv1013;locus_tag=GCA000153685_01071;product=Putative ligase Rv1013;Dbxref=GO:0005886,GO:0006633,GO:0009274,GO:0016874,GO:0070566;gene=pks16;Parent=GCA000153685_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_003405202.1,SO:0001217,UniParc:UPI00000D4F22,UniRef:UniRef100_O05598,UniRef:UniRef50_O05598,UniRef:UniRef90_O05598;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	1138295	1138870	.	-	.	ID=GCA000153685_01072_gene;locus_tag=GCA000153685_01072;gene=pth
contig_1	Pyrodigal	CDS	1138295	1138870	.	-	0	ID=GCA000153685_01072;Name=aminoacyl-tRNA hydrolase;locus_tag=GCA000153685_01072;product=aminoacyl-tRNA hydrolase;Dbxref=GO:0004045,GO:0005737,GO:0006412;gene=pth;Parent=GCA000153685_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405251.1,SO:0001217,UniParc:UPI0000132927,UniRef:UniRef100_P9WHN7,UniRef:UniRef50_P9WHN7,UniRef:UniRef90_P9WHN7;ec_number=3.1.1.29
contig_1	Pyrodigal	gene	1138883	1139530	.	-	.	ID=GCA000153685_01073_gene;locus_tag=GCA000153685_01073;gene=rplY
contig_1	Pyrodigal	CDS	1138883	1139530	.	-	0	ID=GCA000153685_01073;Name=50S ribosomal protein L25/general stress protein Ctc;locus_tag=GCA000153685_01073;product=50S ribosomal protein L25/general stress protein Ctc;Dbxref=GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA000153685_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02897,RefSeq:WP_003405254.1,SO:0001217,UniParc:UPI0000133DE5,UniRef:UniRef100_P9WHB5,UniRef:UniRef50_P9WHB5,UniRef:UniRef90_P9WHB5
contig_1	Pyrodigal	gene	1139747	1140397	.	-	.	ID=GCA000153685_01074_gene;locus_tag=GCA000153685_01074;gene=lpqT
contig_1	Pyrodigal	CDS	1139747	1140397	.	-	0	ID=GCA000153685_01074;Name=Putative lipoprotein LpqT;locus_tag=GCA000153685_01074;product=Putative lipoprotein LpqT;Dbxref=GO:0005886,GO:0009274;gene=lpqT;Parent=GCA000153685_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012781F1,UniRef:UniRef100_A0A0E9AJL0,UniRef:UniRef50_Q7U0V0,UniRef:UniRef90_P9WK59
contig_1	Pyrodigal	gene	1140463	1141443	.	-	.	ID=GCA000153685_01075_gene;locus_tag=GCA000153685_01075;gene=prs
contig_1	Pyrodigal	CDS	1140463	1141443	.	-	0	ID=GCA000153685_01075;Name=ribose-phosphate diphosphokinase;locus_tag=GCA000153685_01075;product=ribose-phosphate diphosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0006015,GO:0006164,GO:0009058,GO:0009156,GO:0016301;gene=prs;Parent=GCA000153685_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_003405263.1,SO:0001217,UniParc:UPI000012DFC3,UniRef:UniRef100_P9WKE3,UniRef:UniRef50_P9WKE3,UniRef:UniRef90_P9WKE3;ec_number=2.7.6.1
contig_1	Pyrodigal	gene	1141535	1143022	.	-	.	ID=GCA000153685_01076_gene;locus_tag=GCA000153685_01076;gene=glmU
contig_1	Pyrodigal	CDS	1141535	1143022	.	-	0	ID=GCA000153685_01076;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA000153685_01076;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0005737,GO:0006048,GO:0008360,GO:0009245,GO:0009252,GO:0016020,GO:0019134,GO:0071555;gene=glmU;Parent=GCA000153685_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04042,RefSeq:WP_003405267.1,SO:0001217,UniParc:UPI0000165266,UniRef:UniRef100_P9WMN3,UniRef:UniRef50_P9WMN3,UniRef:UniRef90_P9WMN3;ec_number=2.7.7.23
contig_1	tRNAscan-SE	gene	1143038	1143109	.	-	.	ID=GCA000153685_01077_gene;locus_tag=GCA000153685_01077;gene=trnQ
contig_1	tRNAscan-SE	tRNA	1143038	1143109	.	-	.	ID=GCA000153685_01077;Name=tRNA-Gln(ttg);locus_tag=GCA000153685_01077;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000153685_01077_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	Pyrodigal	gene	1143277	1143870	.	+	.	ID=GCA000153685_01078_gene;locus_tag=GCA000153685_01078;gene=acrR
contig_1	Pyrodigal	CDS	1143277	1143870	.	+	0	ID=GCA000153685_01078;Name=Intercellular adhesion protein R;locus_tag=GCA000153685_01078;product=Intercellular adhesion protein R;gene=acrR;Parent=GCA000153685_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_003405271.1,SO:0001217,UniParc:UPI0000165267,UniRef:UniRef100_A5U162,UniRef:UniRef50_S5T1C8,UniRef:UniRef90_A0A3S5D011
contig_1	Pyrodigal	gene	1143929	1147633	.	+	.	ID=GCA000153685_01079_gene;locus_tag=GCA000153685_01079;gene=mfd
contig_1	Pyrodigal	CDS	1143929	1147633	.	+	0	ID=GCA000153685_01079;Name=transcription-repair coupling factor;locus_tag=GCA000153685_01079;product=transcription-repair coupling factor;Dbxref=GO:0000716,GO:0003677,GO:0003684,GO:0004386,GO:0005524,GO:0005829,GO:0005886,GO:0006281,GO:0006355,GO:0015616,GO:0016787,GO:0043175;gene=mfd;Parent=GCA000153685_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03723,RefSeq:WP_003405273.1,SO:0001217,UniParc:UPI000012F03B,UniRef:UniRef100_P9WMQ5,UniRef:UniRef50_P9WMQ5,UniRef:UniRef90_P9WMQ5;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1147630	1148610	.	+	.	ID=GCA000153685_01080_gene;locus_tag=GCA000153685_01080;gene=mazG
contig_1	Pyrodigal	CDS	1147630	1148610	.	+	0	ID=GCA000153685_01080;Name=nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA000153685_01080;product=nucleoside triphosphate pyrophosphohydrolase;Dbxref=GO:0000287,GO:0005524,GO:0006203,GO:0006979,GO:0009274,GO:0035539,GO:0046047,GO:0046052,GO:0046061,GO:0046076,GO:0046081,GO:0047429,GO:0047693,GO:0051289;gene=mazG;Parent=GCA000153685_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF47B6,UniRef:UniRef100_P96379,UniRef:UniRef50_P96379,UniRef:UniRef90_P96379;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	1148698	1149429	.	+	.	ID=GCA000153685_01081_gene;locus_tag=GCA000153685_01081
contig_1	Pyrodigal	CDS	1148698	1149429	.	+	0	ID=GCA000153685_01081;Name=Transglycosylase SLT domain-containing protein;locus_tag=GCA000153685_01081;product=Transglycosylase SLT domain-containing protein;Parent=GCA000153685_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900256.1,SO:0001217,UniParc:UPI0000165268,UniRef:UniRef100_A5U165,UniRef:UniRef50_A0A7I7XLZ1,UniRef:UniRef90_R4MGB6
contig_1	Pyrodigal	gene	1149526	1150815	.	+	.	ID=GCA000153685_01082_gene;locus_tag=GCA000153685_01082;gene=eno
contig_1	Pyrodigal	CDS	1149526	1150815	.	+	0	ID=GCA000153685_01082;Name=phosphopyruvate hydratase;locus_tag=GCA000153685_01082;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000153685_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_003898693.1,SO:0001217,UniParc:UPI0000129F82,UniRef:UniRef100_P9WNL1,UniRef:UniRef50_P9WNL1,UniRef:UniRef90_P9WNL1;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	1150820	1151506	.	+	.	ID=GCA000153685_01083_gene;locus_tag=GCA000153685_01083
contig_1	Pyrodigal	CDS	1150820	1151506	.	+	0	ID=GCA000153685_01083;Name=Septum formation initiator family protein;locus_tag=GCA000153685_01083;product=Septum formation initiator family protein;Parent=GCA000153685_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405293.1,SO:0001217,UniParc:UPI00000D10B4,UniRef:UniRef100_P96376,UniRef:UniRef50_A0A7I7VU34,UniRef:UniRef90_A0A8I0JYM0
contig_1	Pyrodigal	gene	1151499	1151990	.	+	.	ID=GCA000153685_01084_gene;locus_tag=GCA000153685_01084
contig_1	Pyrodigal	CDS	1151499	1151990	.	+	0	ID=GCA000153685_01084;Name=Septum formation initiator subfamily protein;locus_tag=GCA000153685_01084;product=Septum formation initiator subfamily protein;Parent=GCA000153685_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09009,RefSeq:WP_003405296.1,SO:0001217,UniParc:UPI00000CCC05,UniRef:UniRef100_A0A0H3LDZ6,UniRef:UniRef50_A0A8H9Y8Z9,UniRef:UniRef90_A0A0H3LDZ6
contig_1	Pyrodigal	gene	1151981	1152940	.	+	.	ID=GCA000153685_01085_gene;locus_tag=GCA000153685_01085;gene=ppx2
contig_1	Pyrodigal	CDS	1151981	1152940	.	+	0	ID=GCA000153685_01085;Name=exopolyphosphatase Ppx2;locus_tag=GCA000153685_01085;product=exopolyphosphatase Ppx2;Dbxref=GO:0004309,GO:0005886,GO:0016462;gene=ppx2;Parent=GCA000153685_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405299,KEGG:K01524,RefSeq:WP_003405299.1,SO:0001217,UniParc:UPI00000D10AB,UniRef:UniRef100_P96374,UniRef:UniRef50_P96374,UniRef:UniRef90_P96374;ec_number=3.6.1.11
contig_1	Pyrodigal	gene	1153042	1153134	.	+	.	ID=GCA000153685_01086_gene;locus_tag=GCA000153685_01086
contig_1	Pyrodigal	CDS	1153042	1153134	.	+	0	ID=GCA000153685_01086;Name=hypothetical protein;locus_tag=GCA000153685_01086;product=hypothetical protein;Parent=GCA000153685_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D4C0,UniRef:UniRef100_A0A0E8NXG5,UniRef:UniRef90_A0A0E8NXG5
contig_1	Pyrodigal	gene	1153389	1154069	.	-	.	ID=GCA000153685_01087_gene;locus_tag=GCA000153685_01087;gene=kdpE
contig_1	Pyrodigal	CDS	1153389	1154069	.	-	0	ID=GCA000153685_01087;Name=two-component system response regulator KdpE;locus_tag=GCA000153685_01087;product=two-component system response regulator KdpE;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=kdpE;Parent=GCA000153685_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405305,KEGG:K07667,RefSeq:WP_003405305.1,SO:0001217,UniParc:UPI00000D103A,UniRef:UniRef100_P9WGN1,UniRef:UniRef50_P9WGN1,UniRef:UniRef90_P9WGN1
contig_1	Pyrodigal	gene	1154066	1156648	.	-	.	ID=GCA000153685_01088_gene;locus_tag=GCA000153685_01088;gene=kdpD
contig_1	Pyrodigal	CDS	1154066	1156648	.	-	0	ID=GCA000153685_01088;Name=sensor histidine kinase KdpD;locus_tag=GCA000153685_01088;product=sensor histidine kinase KdpD;Dbxref=GO:0000155,GO:0005524,GO:0005737,GO:0005886;gene=kdpD;Parent=GCA000153685_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003915886,RefSeq:WP_003898694.1,SO:0001217,UniParc:UPI00005EE4A1,UniRef:UniRef100_P9WGL2,UniRef:UniRef50_P9WGL3,UniRef:UniRef90_P9WGL3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1156739	1156885	.	+	.	ID=GCA000153685_01089_gene;locus_tag=GCA000153685_01089
contig_1	Pyrodigal	CDS	1156739	1156885	.	+	0	ID=GCA000153685_01089;Name=Potassium transporter Trk;locus_tag=GCA000153685_01089;product=Potassium transporter Trk;Parent=GCA000153685_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405313.1,SO:0001217,UniParc:UPI000169A3F5,UniRef:UniRef100_A0A0H3LE00,UniRef:UniRef50_A0A0H3LE00,UniRef:UniRef90_A0A0H3LE00
contig_1	Pyrodigal	gene	1156876	1156974	.	+	.	ID=GCA000153685_01090_gene;locus_tag=GCA000153685_01090;gene=kdpF
contig_1	Pyrodigal	CDS	1156876	1156974	.	+	0	ID=GCA000153685_01090;Name=K(+)-transporting ATPase subunit F;locus_tag=GCA000153685_01090;product=K(+)-transporting ATPase subunit F;Dbxref=GO:0006813,GO:0031004,GO:0043462;gene=kdpF;Parent=GCA000153685_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004028E1,UniRef:UniRef100_Q6ASE8,UniRef:UniRef50_Q6ASE8,UniRef:UniRef90_Q6ASE8;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	1156974	1158689	.	+	.	ID=GCA000153685_01091_gene;locus_tag=GCA000153685_01091;gene=kdpA
contig_1	Pyrodigal	CDS	1156974	1158689	.	+	0	ID=GCA000153685_01091;Name=potassium-transporting ATPase subunit KdpA;locus_tag=GCA000153685_01091;product=potassium-transporting ATPase subunit KdpA;Dbxref=GO:0005886,GO:0006813,GO:0008556,GO:0030955,GO:0031004;gene=kdpA;Parent=GCA000153685_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01546,RefSeq:WP_003900257.1,SO:0001217,UniParc:UPI0001277F9E,UniRef:UniRef100_A0A0H3L776,UniRef:UniRef50_P9WKF3,UniRef:UniRef90_P9WKF3;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	1158689	1160815	.	+	.	ID=GCA000153685_01092_gene;locus_tag=GCA000153685_01092;gene=kdpB
contig_1	Pyrodigal	CDS	1158689	1160815	.	+	0	ID=GCA000153685_01092;Name=potassium-transporting ATPase subunit KdpB;locus_tag=GCA000153685_01092;product=potassium-transporting ATPase subunit KdpB;Dbxref=GO:0000287,GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0016020,GO:0016887,GO:0031004;gene=kdpB;Parent=GCA000153685_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4A2,UniRef:UniRef100_P9WPU3,UniRef:UniRef50_P9WPU3,UniRef:UniRef90_P9WPU3;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	1160815	1161384	.	+	.	ID=GCA000153685_01093_gene;locus_tag=GCA000153685_01093;gene=kdpC
contig_1	Pyrodigal	CDS	1160815	1161384	.	+	0	ID=GCA000153685_01093;Name=K(+)-transporting ATPase subunit C;locus_tag=GCA000153685_01093;product=K(+)-transporting ATPase subunit C;Dbxref=GO:0005524,GO:0005886,GO:0008556;gene=kdpC;Parent=GCA000153685_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405322.1,SO:0001217,UniParc:UPI0000126282,UniRef:UniRef100_P9WKF1,UniRef:UniRef50_P9WKF1,UniRef:UniRef90_P9WKF1
contig_1	Pyrodigal	gene	1161388	1162917	.	-	.	ID=GCA000153685_01094_gene;locus_tag=GCA000153685_01094;gene=trcS
contig_1	Pyrodigal	CDS	1161388	1162917	.	-	0	ID=GCA000153685_01094;Name=Sensor histidine kinase TrcS;locus_tag=GCA000153685_01094;product=Sensor histidine kinase TrcS;Dbxref=GO:0000155,GO:0000160,GO:0004672,GO:0005509,GO:0005524,GO:0005886,GO:0030145;gene=trcS;Parent=GCA000153685_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07656,RefSeq:WP_003405324.1,SO:0001217,UniParc:UPI00000D5F5C,UniRef:UniRef100_P96368,UniRef:UniRef50_P96368,UniRef:UniRef90_P96368;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1162925	1163698	.	-	.	ID=GCA000153685_01095_gene;locus_tag=GCA000153685_01095;gene=trcR
contig_1	Pyrodigal	CDS	1162925	1163698	.	-	0	ID=GCA000153685_01095;Name=two-component system response regulator TrcR;locus_tag=GCA000153685_01095;product=two-component system response regulator TrcR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=trcR;Parent=GCA000153685_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405328,COG:COG0745,COG:TK,KEGG:K07672,RefSeq:WP_003405328.1,SO:0001217,UniParc:UPI00000D3B14,UniRef:UniRef100_L7N689,UniRef:UniRef50_O69730,UniRef:UniRef90_L7N689
contig_1	Pyrodigal	gene	1163880	1164371	.	-	.	ID=GCA000153685_01096_gene;locus_tag=GCA000153685_01096
contig_1	Pyrodigal	CDS	1163880	1164371	.	-	0	ID=GCA000153685_01096;Name=Transposase;locus_tag=GCA000153685_01096;product=Transposase;Parent=GCA000153685_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4A5,UniRef:UniRef100_A0A0H3L778,UniRef:UniRef50_A0A3C2B193,UniRef:UniRef90_A0A0H3L778
contig_1	Pyrodigal	gene	1164337	1165023	.	-	.	ID=GCA000153685_01097_gene;locus_tag=GCA000153685_01097
contig_1	Pyrodigal	CDS	1164337	1165023	.	-	0	ID=GCA000153685_01097;Name=Transposase;locus_tag=GCA000153685_01097;product=Transposase;Parent=GCA000153685_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D0FA8,UniRef:UniRef100_A5U179,UniRef:UniRef50_A5U179,UniRef:UniRef90_A5U179
contig_1	Pyrodigal	gene	1165057	1165380	.	-	.	ID=GCA000153685_01098_gene;locus_tag=GCA000153685_01098
contig_1	Pyrodigal	CDS	1165057	1165380	.	-	0	ID=GCA000153685_01098;Name=Truncated IS1560 transposase;locus_tag=GCA000153685_01098;product=Truncated IS1560 transposase;Parent=GCA000153685_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4A7,UniRef:UniRef100_A5U180,UniRef:UniRef50_A0A498QYC2,UniRef:UniRef90_A5U180
contig_1	Pyrodigal	gene	1165506	1165790	.	-	.	ID=GCA000153685_01099_gene;locus_tag=GCA000153685_01099;gene=esxV
contig_1	Pyrodigal	CDS	1165506	1165790	.	-	0	ID=GCA000153685_01099;Name=type VII secretion system protein EsxV;locus_tag=GCA000153685_01099;product=type VII secretion system protein EsxV;Dbxref=GO:0005576,GO:0009274;gene=esxV;Parent=GCA000153685_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898699,RefSeq:WP_003898699.1,SO:0001217,UniParc:UPI000011DAE0,UniRef:UniRef100_P0DOA6,UniRef:UniRef50_P9WNI7,UniRef:UniRef90_P0DOA6
contig_1	Pyrodigal	gene	1165817	1166113	.	-	.	ID=GCA000153685_01100_gene;locus_tag=GCA000153685_01100;gene=esxJ
contig_1	Pyrodigal	CDS	1165817	1166113	.	-	0	ID=GCA000153685_01100;Name=type VII secretion system ESX-5 protein EsxJ;locus_tag=GCA000153685_01100;product=type VII secretion system ESX-5 protein EsxJ;Dbxref=GO:0005576;gene=esxJ;Parent=GCA000153685_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405345,RefSeq:WP_003405345.1,SO:0001217,UniParc:UPI000012A194,UniRef:UniRef100_P9WNJ9,UniRef:UniRef50_P9WNJ7,UniRef:UniRef90_P9WNJ9
contig_1	Pyrodigal	gene	1166259	1167434	.	-	.	ID=GCA000153685_01101_gene;locus_tag=GCA000153685_01101;gene=pPE15
contig_1	Pyrodigal	CDS	1166259	1167434	.	-	0	ID=GCA000153685_01101;Name=PPE family protein PPE15;locus_tag=GCA000153685_01101;product=PPE family protein PPE15;Dbxref=GO:0005576,GO:0033650,GO:0052572;gene=pPE15;Parent=GCA000153685_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405368.1,SO:0001217,UniParc:UPI00000D5F9E,UniRef:UniRef100_P9WI31,UniRef:UniRef50_P9WI31,UniRef:UniRef90_P9WI31
contig_1	Pyrodigal	gene	1167511	1168338	.	-	.	ID=GCA000153685_01102_gene;locus_tag=GCA000153685_01102;gene=pE8
contig_1	Pyrodigal	CDS	1167511	1168338	.	-	0	ID=GCA000153685_01102;Name=PE family protein PE8;locus_tag=GCA000153685_01102;product=PE family protein PE8;Dbxref=GO:0005576;gene=pE8;Parent=GCA000153685_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405370.1,SO:0001217,UniParc:UPI00000D5FCF,UniRef:UniRef100_L7N667,UniRef:UniRef50_L7N667,UniRef:UniRef90_L7N667
contig_1	Pyrodigal	gene	1169126	1169398	.	-	.	ID=GCA000153685_01103_gene;locus_tag=GCA000153685_01103
contig_1	Pyrodigal	CDS	1169126	1169398	.	-	0	ID=GCA000153685_01103;Name=hypothetical protein;locus_tag=GCA000153685_01103;product=hypothetical protein;Parent=GCA000153685_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C59288,UniRef:UniRef100_A0A0E8VSH5,UniRef:UniRef50_A5U185,UniRef:UniRef90_A5U185
contig_1	Pyrodigal	gene	1169534	1169971	.	-	.	ID=GCA000153685_01104_gene;locus_tag=GCA000153685_01104
contig_1	Pyrodigal	CDS	1169534	1169971	.	-	0	ID=GCA000153685_01104;Name=IS like-2 transposase;locus_tag=GCA000153685_01104;product=IS like-2 transposase;Parent=GCA000153685_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F61A1,UniRef:UniRef100_A0A0H3L7K6,UniRef:UniRef50_A0A0H3L7K6,UniRef:UniRef90_A0A0H3L7K6
contig_1	Pyrodigal	gene	1170054	1170596	.	-	.	ID=GCA000153685_01105_gene;locus_tag=GCA000153685_01105
contig_1	Pyrodigal	CDS	1170054	1170596	.	-	0	ID=GCA000153685_01105;Name=IS5 family transposase;locus_tag=GCA000153685_01105;product=IS5 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E39188,UniRef:UniRef100_A0A0E9AFP5,UniRef:UniRef50_A0A852VTP8,UniRef:UniRef90_A0A0E9AFP5
contig_1	Pyrodigal	gene	1170744	1171769	.	-	.	ID=GCA000153685_01106_gene;locus_tag=GCA000153685_01106
contig_1	Pyrodigal	CDS	1170744	1171769	.	-	0	ID=GCA000153685_01106;Name=Serine protease;locus_tag=GCA000153685_01106;product=Serine protease;Parent=GCA000153685_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405514.1,SO:0001217,UniParc:UPI00000D5E7D,UniRef:UniRef100_P96358,UniRef:UniRef50_A0A7I7TH75,UniRef:UniRef90_P96358
contig_1	Pyrodigal	gene	1172055	1172639	.	+	.	ID=GCA000153685_01107_gene;locus_tag=GCA000153685_01107
contig_1	Pyrodigal	CDS	1172055	1172639	.	+	0	ID=GCA000153685_01107;Name=AbiEi antitoxin C-terminal domain-containing protein;locus_tag=GCA000153685_01107;product=AbiEi antitoxin C-terminal domain-containing protein;Parent=GCA000153685_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4AE,UniRef:UniRef100_P96357,UniRef:UniRef50_A0A2I7W5F4,UniRef:UniRef90_A0A2I7W5F4
contig_1	Pyrodigal	gene	1172636	1173517	.	+	.	ID=GCA000153685_01108_gene;locus_tag=GCA000153685_01108
contig_1	Pyrodigal	CDS	1172636	1173517	.	+	0	ID=GCA000153685_01108;Name=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;locus_tag=GCA000153685_01108;product=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;Parent=GCA000153685_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898703.1,SO:0001217,UniParc:UPI00000D0FC0,UniRef:UniRef100_P96356,UniRef:UniRef50_P96356,UniRef:UniRef90_P96356
contig_1	Pyrodigal	gene	1174387	1175634	.	+	.	ID=GCA000153685_01109_gene;locus_tag=GCA000153685_01109;gene=tnp
contig_1	Pyrodigal	CDS	1174387	1175634	.	+	0	ID=GCA000153685_01109;Name=IS256 family IS1081 transposase;locus_tag=GCA000153685_01109;product=IS256 family IS1081 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000153685_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1081,RefSeq:WP_003900260.1,SO:0001217,UniParc:UPI00000D2D3E,UniRef:UniRef100_Q8VIQ5,UniRef:UniRef50_P60230,UniRef:UniRef90_P60230
contig_1	Pyrodigal	gene	1176002	1177036	.	-	.	ID=GCA000153685_01110_gene;locus_tag=GCA000153685_01110
contig_1	Pyrodigal	CDS	1176002	1177036	.	-	0	ID=GCA000153685_01110;Name=Transcriptional regulator;locus_tag=GCA000153685_01110;product=Transcriptional regulator;Parent=GCA000153685_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4B0,UniRef:UniRef100_A0A0E7ZJH2,UniRef:UniRef50_A0A655AM41,UniRef:UniRef90_A0A655AM41
contig_1	Pyrodigal	gene	1177074	1177277	.	-	.	ID=GCA000153685_01111_gene;locus_tag=GCA000153685_01111
contig_1	Pyrodigal	CDS	1177074	1177277	.	-	0	ID=GCA000153685_01111;Name=hypothetical protein;locus_tag=GCA000153685_01111;product=hypothetical protein;Parent=GCA000153685_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405585.1,SO:0001217,UniParc:UPI00005EE4B1,UniRef:UniRef100_A0A0H3LBI7,UniRef:UniRef50_A0A0H3LBI7,UniRef:UniRef90_A0A0H3LBI7
contig_1	Pyrodigal	gene	1177350	1177796	.	+	.	ID=GCA000153685_01112_gene;locus_tag=GCA000153685_01112;gene=mosR
contig_1	Pyrodigal	CDS	1177350	1177796	.	+	0	ID=GCA000153685_01112;Name=oxidation-sensing regulator MosR;locus_tag=GCA000153685_01112;product=oxidation-sensing regulator MosR;gene=mosR;Parent=GCA000153685_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405595,RefSeq:WP_003405595.1,SO:0001217,UniParc:UPI00000D5F35,UniRef:UniRef100_A5U194,UniRef:UniRef50_A5U194,UniRef:UniRef90_A5U194
contig_1	Pyrodigal	gene	1177845	1178750	.	+	.	ID=GCA000153685_01113_gene;locus_tag=GCA000153685_01113
contig_1	Pyrodigal	CDS	1177845	1178750	.	+	0	ID=GCA000153685_01113;Name=Putative oxidoreductase;locus_tag=GCA000153685_01113;product=Putative oxidoreductase;Parent=GCA000153685_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405600.1,SO:0001217,UniParc:UPI000016526A,UniRef:UniRef100_Q7D8X9,UniRef:UniRef50_A0A655I1M3,UniRef:UniRef90_R4M0P2
contig_1	Pyrodigal	gene	1178909	1179664	.	-	.	ID=GCA000153685_01114_gene;locus_tag=GCA000153685_01114
contig_1	Pyrodigal	CDS	1178909	1179664	.	-	0	ID=GCA000153685_01114;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000153685_01114;product=Helix-turn-helix domain-containing protein;Parent=GCA000153685_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405603.1,SO:0001217,UniParc:UPI00000D0F37,UniRef:UniRef100_O53399,UniRef:UniRef50_O53399,UniRef:UniRef90_O53399
contig_1	Pyrodigal	gene	1179959	1180585	.	-	.	ID=GCA000153685_01115_gene;locus_tag=GCA000153685_01115
contig_1	Pyrodigal	CDS	1179959	1180585	.	-	0	ID=GCA000153685_01115;Name=hypothetical protein;locus_tag=GCA000153685_01115;product=hypothetical protein;Parent=GCA000153685_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2BE3,UniRef:UniRef100_Q8VK85,UniRef:UniRef50_Q8VK85,UniRef:UniRef90_Q8VK85
contig_1	Pyrodigal	gene	1180825	1181076	.	+	.	ID=GCA000153685_01116_gene;locus_tag=GCA000153685_01116
contig_1	Pyrodigal	CDS	1180825	1181076	.	+	0	ID=GCA000153685_01116;Name=hypothetical protein;locus_tag=GCA000153685_01116;product=hypothetical protein;Parent=GCA000153685_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898708.1,SO:0001217,UniParc:UPI00005EE4B3,UniRef:UniRef100_A0A0H3L7L8,UniRef:UniRef50_O53400,UniRef:UniRef90_O53400
contig_1	Pyrodigal	gene	1180975	1181229	.	-	.	ID=GCA000153685_01117_gene;locus_tag=GCA000153685_01117
contig_1	Pyrodigal	CDS	1180975	1181229	.	-	0	ID=GCA000153685_01117;Name=hypothetical protein;locus_tag=GCA000153685_01117;product=hypothetical protein;Parent=GCA000153685_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_336407943.1,SO:0001217,UniParc:UPI0004E3BFC8,UniRef:UniRef100_O53401,UniRef:UniRef50_O53401,UniRef:UniRef90_O53401
contig_1	Pyrodigal	gene	1181336	1181449	.	+	.	ID=GCA000153685_01118_gene;locus_tag=GCA000153685_01118;pseudogene=unitary
contig_1	Pyrodigal	CDS	1181336	1181449	.	+	0	ID=GCA000153685_01118;Name=Fic family protein;locus_tag=GCA000153685_01118;product=Fic family protein;pseudogene=unitary;Parent=GCA000153685_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42AE,UniRef:UniRef100_Q8VK84,UniRef:UniRef50_A0A7Y0Y471,UniRef:UniRef50_Q8VK84,UniRef:UniRef90_Q8VK84,UniRef:UniRef90_UPI00202A317A
contig_1	tRNAscan-SE	gene	1182360	1182433	.	+	.	ID=GCA000153685_01119_gene;locus_tag=GCA000153685_01119;gene=trnL
contig_1	tRNAscan-SE	tRNA	1182360	1182433	.	+	.	ID=GCA000153685_01119;Name=tRNA-Leu(taa);locus_tag=GCA000153685_01119;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000153685_01119_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	1182592	1183356	.	+	.	ID=GCA000153685_01120_gene;locus_tag=GCA000153685_01120
contig_1	Pyrodigal	CDS	1182592	1183356	.	+	0	ID=GCA000153685_01120;Name=DUF427 domain-containing protein;locus_tag=GCA000153685_01120;product=DUF427 domain-containing protein;Parent=GCA000153685_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900263.1,SO:0001217,UniParc:UPI00000D1198,UniRef:UniRef100_O53404,UniRef:UniRef50_A0A6N4VGK1,UniRef:UniRef90_A0A0H3LE27
contig_1	Pyrodigal	gene	1183568	1183714	.	-	.	ID=GCA000153685_01121_gene;locus_tag=GCA000153685_01121
contig_1	Pyrodigal	CDS	1183568	1183714	.	-	0	ID=GCA000153685_01121;Name=DUF222 domain-containing protein;locus_tag=GCA000153685_01121;product=DUF222 domain-containing protein;Parent=GCA000153685_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405615.1,SO:0001217,UniParc:UPI0001534064,UniRef:UniRef100_Q8VK81,UniRef:UniRef50_R4MED6,UniRef:UniRef90_Q8VK81
contig_1	Pyrodigal	gene	1184309	1185541	.	+	.	ID=GCA000153685_01122_gene;locus_tag=GCA000153685_01122
contig_1	Pyrodigal	CDS	1184309	1185541	.	+	0	ID=GCA000153685_01122;Name=Seven-bladed beta-propeller protein Rv1057;locus_tag=GCA000153685_01122;product=Seven-bladed beta-propeller protein Rv1057;Parent=GCA000153685_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4B6,UniRef:UniRef100_O53405,UniRef:UniRef50_O53405,UniRef:UniRef90_O53405
contig_1	Pyrodigal	gene	1185648	1187279	.	+	.	ID=GCA000153685_01123_gene;locus_tag=GCA000153685_01123
contig_1	Pyrodigal	CDS	1185648	1187279	.	+	0	ID=GCA000153685_01123;Name=Medium chain fatty-acid-CoA ligase;locus_tag=GCA000153685_01123;product=Medium chain fatty-acid-CoA ligase;Parent=GCA000153685_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405625.1,SO:0001217,UniParc:UPI00000D5ED2,UniRef:UniRef100_A5U1A4,UniRef:UniRef50_A0A3S4RKD8,UniRef:UniRef90_A0A654TFG4
contig_1	Pyrodigal	gene	1187361	1188419	.	+	.	ID=GCA000153685_01124_gene;locus_tag=GCA000153685_01124
contig_1	Pyrodigal	CDS	1187361	1188419	.	+	0	ID=GCA000153685_01124;Name=Conserved protein;locus_tag=GCA000153685_01124;product=Conserved protein;Parent=GCA000153685_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898714.1,SO:0001217,UniParc:UPI00005EE4B7,UniRef:UniRef100_Q7D8X3,UniRef:UniRef50_A0A498QXS5,UniRef:UniRef90_O53407
contig_1	Pyrodigal	gene	1188472	1188945	.	+	.	ID=GCA000153685_01125_gene;locus_tag=GCA000153685_01125
contig_1	Pyrodigal	CDS	1188472	1188945	.	+	0	ID=GCA000153685_01125;Name=SRPBCC family protein;locus_tag=GCA000153685_01125;product=SRPBCC family protein;Parent=GCA000153685_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405633.1,SO:0001217,UniParc:UPI00000D1177,UniRef:UniRef100_O53408,UniRef:UniRef50_O53408,UniRef:UniRef90_O53408
contig_1	Pyrodigal	gene	1188979	1189842	.	+	.	ID=GCA000153685_01126_gene;locus_tag=GCA000153685_01126
contig_1	Pyrodigal	CDS	1188979	1189842	.	+	0	ID=GCA000153685_01126;Name=Glutamine amidotransferase%2C class-II;locus_tag=GCA000153685_01126;product=Glutamine amidotransferase%2C class-II;Parent=GCA000153685_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405636.1,SO:0001217,UniParc:UPI00000D5E8F,UniRef:UniRef100_O53409,UniRef:UniRef50_A0A7W7PLQ4,UniRef:UniRef90_A0A655FJF8
contig_1	Pyrodigal	gene	1189820	1190704	.	+	.	ID=GCA000153685_01127_gene;locus_tag=GCA000153685_01127
contig_1	Pyrodigal	CDS	1189820	1190704	.	+	0	ID=GCA000153685_01127;Name=PNPLA domain-containing protein;locus_tag=GCA000153685_01127;product=PNPLA domain-containing protein;Parent=GCA000153685_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB70,UniRef:UniRef100_A0A0H3L7M6,UniRef:UniRef50_A0A7I7P0P8,UniRef:UniRef90_O53410
contig_1	Pyrodigal	gene	1190705	1191787	.	-	.	ID=GCA000153685_01128_gene;locus_tag=GCA000153685_01128
contig_1	Pyrodigal	CDS	1190705	1191787	.	-	0	ID=GCA000153685_01128;Name=putative NTE family protein Mb1092c;locus_tag=GCA000153685_01128;product=putative NTE family protein Mb1092c;Dbxref=GO:0004622,GO:0016042,GO:0046470;Parent=GCA000153685_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405642.1,SO:0001217,UniParc:UPI0000139F91,UniRef:UniRef100_P9WIY9,UniRef:UniRef50_P9WIY9,UniRef:UniRef90_P9WIY9
contig_1	Pyrodigal	gene	1191868	1192251	.	-	.	ID=GCA000153685_01129_gene;locus_tag=GCA000153685_01129;gene=lpqV
contig_1	Pyrodigal	CDS	1191868	1192251	.	-	0	ID=GCA000153685_01129;Name=Putative lipoprotein LpqV;locus_tag=GCA000153685_01129;product=Putative lipoprotein LpqV;Dbxref=GO:0005886;gene=lpqV;Parent=GCA000153685_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898716.1,SO:0001217,UniParc:UPI00005EE4B9,UniRef:UniRef100_P9WK57,UniRef:UniRef50_P9WK57,UniRef:UniRef90_P9WK57
contig_1	Pyrodigal	gene	1192399	1192965	.	+	.	ID=GCA000153685_01130_gene;locus_tag=GCA000153685_01130
contig_1	Pyrodigal	CDS	1192399	1192965	.	+	0	ID=GCA000153685_01130;Name=Cysteine dioxygenase;locus_tag=GCA000153685_01130;product=Cysteine dioxygenase;Parent=GCA000153685_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405649.1,SO:0001217,UniParc:UPI00000D0F2E,UniRef:UniRef100_O53413,UniRef:UniRef50_A0A318RJA6,UniRef:UniRef90_O53413
contig_1	Pyrodigal	gene	1192962	1193357	.	+	.	ID=GCA000153685_01131_gene;locus_tag=GCA000153685_01131
contig_1	Pyrodigal	CDS	1192962	1193357	.	+	0	ID=GCA000153685_01131;Name=Rhodanese domain-containing protein;locus_tag=GCA000153685_01131;product=Rhodanese domain-containing protein;Parent=GCA000153685_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405651.1,SO:0001217,UniParc:UPI00000D11D8,UniRef:UniRef100_O53414,UniRef:UniRef50_O53414,UniRef:UniRef90_O53414
contig_1	Pyrodigal	gene	1193385	1195388	.	-	.	ID=GCA000153685_01132_gene;locus_tag=GCA000153685_01132
contig_1	Pyrodigal	CDS	1193385	1195388	.	-	0	ID=GCA000153685_01132;Name=PE_PGRS family protein;locus_tag=GCA000153685_01132;product=PE_PGRS family protein;Parent=GCA000153685_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010924343.1,SO:0001217,UniParc:UPI0000164FE9,UniRef:UniRef100_Q7D8W7,UniRef:UniRef50_Q7D8W7,UniRef:UniRef90_Q7D8W7
contig_1	Pyrodigal	gene	1195721	1196833	.	-	.	ID=GCA000153685_01133_gene;locus_tag=GCA000153685_01133
contig_1	Pyrodigal	CDS	1195721	1196833	.	-	0	ID=GCA000153685_01133;Name=hypothetical protein;locus_tag=GCA000153685_01133;product=hypothetical protein;Parent=GCA000153685_01133_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1196830	1197309	.	-	.	ID=GCA000153685_01134_gene;locus_tag=GCA000153685_01134
contig_1	Pyrodigal	CDS	1196830	1197309	.	-	0	ID=GCA000153685_01134;Name=PE family protein;locus_tag=GCA000153685_01134;product=PE family protein;Parent=GCA000153685_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F45AC88,UniRef:UniRef90_UPI0023DF4DEA
contig_1	Pyrodigal	gene	1197396	1197536	.	+	.	ID=GCA000153685_01135_gene;locus_tag=GCA000153685_01135
contig_1	Pyrodigal	CDS	1197396	1197536	.	+	0	ID=GCA000153685_01135;Name=hypothetical protein;locus_tag=GCA000153685_01135;product=hypothetical protein;Parent=GCA000153685_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009935462.1,SO:0001217,UniParc:UPI00000D2BE9,UniRef:UniRef100_A0A0H3LE41,UniRef:UniRef50_A0A0H3LE41,UniRef:UniRef90_A0A0H3LE41
contig_1	Pyrodigal	gene	1197671	1199434	.	-	.	ID=GCA000153685_01136_gene;locus_tag=GCA000153685_01136
contig_1	Pyrodigal	CDS	1197671	1199434	.	-	0	ID=GCA000153685_01136;Name=Transmembrane protein;locus_tag=GCA000153685_01136;product=Transmembrane protein;Parent=GCA000153685_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405708.1,SO:0001217,UniParc:UPI00000C1537,UniRef:UniRef100_O53417,UniRef:UniRef50_Q741S1,UniRef:UniRef90_Q8VK78
contig_1	Pyrodigal	gene	1199431	1200204	.	-	.	ID=GCA000153685_01137_gene;locus_tag=GCA000153685_01137;gene=echA8
contig_1	Pyrodigal	CDS	1199431	1200204	.	-	0	ID=GCA000153685_01137;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_01137;product=enoyl-CoA hydratase;Dbxref=GO:0004300,GO:0005886,GO:0006635,GO:0009274;gene=echA8;Parent=GCA000153685_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1024,COG:I,RefSeq:WP_003405712.1,SO:0001217,UniParc:UPI0000033264,UniRef:UniRef100_P9WNN9,UniRef:UniRef50_P9WNN9,UniRef:UniRef90_P9WNN9;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	1200216	1201253	.	-	.	ID=GCA000153685_01138_gene;locus_tag=GCA000153685_01138
contig_1	Pyrodigal	CDS	1200216	1201253	.	-	0	ID=GCA000153685_01138;Name=3-hydroxyisobutyryl-CoA hydrolase;locus_tag=GCA000153685_01138;product=3-hydroxyisobutyryl-CoA hydrolase;Parent=GCA000153685_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05605,RefSeq:WP_003405716.1,SO:0001217,UniParc:UPI00000D5E7E,UniRef:UniRef100_O53419,UniRef:UniRef50_A0A5N5W9K5,UniRef:UniRef90_O53419;ec_number=3.1.2.4
contig_1	Pyrodigal	gene	1201440	1202276	.	+	.	ID=GCA000153685_01139_gene;locus_tag=GCA000153685_01139
contig_1	Pyrodigal	CDS	1201440	1202276	.	+	0	ID=GCA000153685_01139;Name=Transmembrane protein;locus_tag=GCA000153685_01139;product=Transmembrane protein;Parent=GCA000153685_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405719.1,SO:0001217,UniParc:UPI00000D5F10,UniRef:UniRef100_A5U1B8,UniRef:UniRef50_Q0S4B9,UniRef:UniRef90_R4M5I5
contig_1	Pyrodigal	gene	1202383	1203243	.	+	.	ID=GCA000153685_01140_gene;locus_tag=GCA000153685_01140
contig_1	Pyrodigal	CDS	1202383	1203243	.	+	0	ID=GCA000153685_01140;Name=Cullin%2C a subunit of E3 ubiquitin ligase;locus_tag=GCA000153685_01140;product=Cullin%2C a subunit of E3 ubiquitin ligase;Parent=GCA000153685_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB71,UniRef:UniRef100_O53421,UniRef:UniRef50_O53421,UniRef:UniRef90_O53421
contig_1	Pyrodigal	gene	1203317	1204534	.	-	.	ID=GCA000153685_01141_gene;locus_tag=GCA000153685_01141;gene=paaJ
contig_1	Pyrodigal	CDS	1203317	1204534	.	-	0	ID=GCA000153685_01141;Name=acetyl-CoA C-acetyltransferase;locus_tag=GCA000153685_01141;product=acetyl-CoA C-acetyltransferase;Dbxref=GO:0016747;gene=paaJ;Parent=GCA000153685_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_003405724.1,SO:0001217,UniParc:UPI00000D5E50,UniRef:UniRef100_A5U1C0,UniRef:UniRef50_A0A222VQW3,UniRef:UniRef90_A0A0I9UCK2;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	1204587	1205537	.	-	.	ID=GCA000153685_01142_gene;locus_tag=GCA000153685_01142
contig_1	Pyrodigal	CDS	1204587	1205537	.	-	0	ID=GCA000153685_01142;Name=GDSL-like esterase Rv1075c;locus_tag=GCA000153685_01142;product=GDSL-like esterase Rv1075c;Dbxref=GO:0004622,GO:0005886,GO:0008126,GO:0009274;Parent=GCA000153685_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F61A9,UniRef:UniRef100_Q7D8W2,UniRef:UniRef50_O53423,UniRef:UniRef90_O53423;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1205754	1206821	.	+	.	ID=GCA000153685_01143_gene;locus_tag=GCA000153685_01143;gene=lipU
contig_1	Pyrodigal	CDS	1205754	1206821	.	+	0	ID=GCA000153685_01143;Name=lipase LipU;locus_tag=GCA000153685_01143;product=lipase LipU;Dbxref=GO:0004806,GO:0005576,GO:0008126;gene=lipU;Parent=GCA000153685_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003918181,RefSeq:WP_003405728.1,SO:0001217,UniParc:UPI0001E62013,UniRef:UniRef100_Q7D8W1,UniRef:UniRef50_O06350,UniRef:UniRef90_O53424;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	1206878	1208272	.	+	.	ID=GCA000153685_01144_gene;locus_tag=GCA000153685_01144;gene=cbs
contig_1	Pyrodigal	CDS	1206878	1208272	.	+	0	ID=GCA000153685_01144;Name=cystathionine beta-synthase;locus_tag=GCA000153685_01144;product=cystathionine beta-synthase;Dbxref=GO:0004122,GO:0004124,GO:0005576,GO:0005737,GO:0005886,GO:0006535,GO:0009274,GO:0019343,GO:0030170;gene=cbs;Parent=GCA000153685_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3620,COG:K,RefSeq:WP_003405730.1,SO:0001217,UniParc:UPI00000D5FC9,UniRef:UniRef100_P9WP51,UniRef:UniRef50_P9WP51,UniRef:UniRef90_P9WP51;ec_number=4.2.1.22
contig_1	Pyrodigal	gene	1208720	1209196	.	+	.	ID=GCA000153685_01145_gene;locus_tag=GCA000153685_01145;gene=pra
contig_1	Pyrodigal	CDS	1208720	1209196	.	+	0	ID=GCA000153685_01145;Name=Proline-rich antigen-like protein;locus_tag=GCA000153685_01145;product=Proline-rich antigen-like protein;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=pra;Parent=GCA000153685_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900269.1,SO:0001217,UniParc:UPI00005EE4C1,UniRef:UniRef100_A0A0E7TP92,UniRef:UniRef50_P41484,UniRef:UniRef90_P9WIM7
contig_1	Pyrodigal	gene	1209228	1210394	.	+	.	ID=GCA000153685_01146_gene;locus_tag=GCA000153685_01146;gene=metB
contig_1	Pyrodigal	CDS	1209228	1210394	.	+	0	ID=GCA000153685_01146;Name=cystathionine gamma-synthase;locus_tag=GCA000153685_01146;product=cystathionine gamma-synthase;Dbxref=GO:0003962,GO:0004123,GO:0005737,GO:0005829,GO:0005886,GO:0019279,GO:0019343,GO:0019346,GO:0030170;gene=metB;Parent=GCA000153685_01146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405736.1,SO:0001217,UniParc:UPI000012EF63,UniRef:UniRef100_P9WGB7,UniRef:UniRef50_P9WGB7,UniRef:UniRef90_P9WGB7;ec_number=2.5.1.48
contig_1	Pyrodigal	gene	1210465	1210959	.	-	.	ID=GCA000153685_01147_gene;locus_tag=GCA000153685_01147;gene=greA
contig_1	Pyrodigal	CDS	1210465	1210959	.	-	0	ID=GCA000153685_01147;Name=transcription elongation factor GreA;locus_tag=GCA000153685_01147;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0005829,GO:0005886,GO:0006354,GO:0009274,GO:0032784,GO:0046677,GO:0070063;gene=greA;Parent=GCA000153685_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_003405742.1,SO:0001217,UniParc:UPI0000033261,UniRef:UniRef100_P9WMT9,UniRef:UniRef50_P9WMT9,UniRef:UniRef90_P9WMT9
contig_1	Pyrodigal	gene	1211145	1211579	.	-	.	ID=GCA000153685_01148_gene;locus_tag=GCA000153685_01148
contig_1	Pyrodigal	CDS	1211145	1211579	.	-	0	ID=GCA000153685_01148;Name=DUF4307 domain-containing protein;locus_tag=GCA000153685_01148;product=DUF4307 domain-containing protein;Parent=GCA000153685_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405744.1,SO:0001217,UniParc:UPI0000165271,UniRef:UniRef100_Q7D8V9,UniRef:UniRef50_A0A1A3P7T4,UniRef:UniRef90_Q7D8V9
contig_1	Pyrodigal	gene	1211681	1212547	.	+	.	ID=GCA000153685_01149_gene;locus_tag=GCA000153685_01149;gene=mca
contig_1	Pyrodigal	CDS	1211681	1212547	.	+	0	ID=GCA000153685_01149;Name=mycothiol conjugate amidase Mca;locus_tag=GCA000153685_01149;product=mycothiol conjugate amidase Mca;Dbxref=GO:0005829,GO:0005886,GO:0008270,GO:0010125,GO:0010126,GO:0010127,GO:0016810,GO:0016811,GO:0052167;gene=mca;Parent=GCA000153685_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18455,RefSeq:WP_003405746.1,SO:0001217,UniParc:UPI00000D5FCD,UniRef:UniRef100_P9WJN1,UniRef:UniRef50_P9WJN1,UniRef:UniRef90_P9WJN1;ec_number=3.5.1.115
contig_1	Pyrodigal	gene	1212544	1212810	.	+	.	ID=GCA000153685_01150_gene;locus_tag=GCA000153685_01150
contig_1	Pyrodigal	CDS	1212544	1212810	.	+	0	ID=GCA000153685_01150;Name=Transmembrane protein;locus_tag=GCA000153685_01150;product=Transmembrane protein;Parent=GCA000153685_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405749.1,SO:0001217,UniParc:UPI00000D109A,UniRef:UniRef100_O53431,UniRef:UniRef50_O53431,UniRef:UniRef90_O53431
contig_1	Pyrodigal	gene	1212797	1214818	.	+	.	ID=GCA000153685_01151_gene;locus_tag=GCA000153685_01151
contig_1	Pyrodigal	CDS	1212797	1214818	.	+	0	ID=GCA000153685_01151;Name=DUF255 domain-containing protein;locus_tag=GCA000153685_01151;product=DUF255 domain-containing protein;Parent=GCA000153685_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405750.1,SO:0001217,UniParc:UPI00000D0FBA,UniRef:UniRef100_O53432,UniRef:UniRef50_F6EQ37,UniRef:UniRef90_A0A0H3L7Q2
contig_1	Pyrodigal	gene	1214917	1215645	.	-	.	ID=GCA000153685_01152_gene;locus_tag=GCA000153685_01152
contig_1	Pyrodigal	CDS	1214917	1215645	.	-	0	ID=GCA000153685_01152;Name=UPF0073 membrane protein Rv1085c;locus_tag=GCA000153685_01152;product=UPF0073 membrane protein Rv1085c;Dbxref=GO:0005886,GO:0140911;Parent=GCA000153685_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901993.1,SO:0001217,UniParc:UPI0000139FC1,UniRef:UniRef100_P9WFN7,UniRef:UniRef50_P9WFN7,UniRef:UniRef90_P9WFN7
contig_1	Pyrodigal	gene	1215756	1216544	.	+	.	ID=GCA000153685_01153_gene;locus_tag=GCA000153685_01153;gene=uppS
contig_1	Pyrodigal	CDS	1215756	1216544	.	+	0	ID=GCA000153685_01153;Name=(2Z%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA000153685_01153;product=(2Z%2C6E)-farnesyl diphosphate synthase;Dbxref=GO:0000287,GO:0004659,GO:0005829,GO:0005886,GO:0016094,GO:0016765,GO:0030145,GO:0033850;gene=uppS;Parent=GCA000153685_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003906511,COG:COG0020,COG:I,KEGG:K12503,RefSeq:WP_003906511.1,SO:0001217,UniParc:UPI0000139FC4,UniRef:UniRef100_P9WFF5,UniRef:UniRef50_P9WFF5,UniRef:UniRef90_P9WFF5;ec_number=2.5.1.68
contig_1	Pyrodigal	gene	1216721	1219033	.	+	.	ID=GCA000153685_01154_gene;locus_tag=GCA000153685_01154
contig_1	Pyrodigal	CDS	1216721	1219033	.	+	0	ID=GCA000153685_01154;Name=PE-PGRS family protein PE_PGRS21;locus_tag=GCA000153685_01154;product=PE-PGRS family protein PE_PGRS21;Parent=GCA000153685_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031666014.1,SO:0001217,UniParc:UPI00045AF4AE,UniRef:UniRef100_UPI00045AF4AE,UniRef:UniRef50_Q79FT0,UniRef:UniRef90_Q79FT0
contig_1	Pyrodigal	gene	1219219	1219530	.	+	.	ID=GCA000153685_01155_gene;locus_tag=GCA000153685_01155
contig_1	Pyrodigal	CDS	1219219	1219530	.	+	0	ID=GCA000153685_01155;Name=(2Z%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA000153685_01155;product=(2Z%2C6E)-farnesyl diphosphate synthase;Parent=GCA000153685_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4C5,UniRef:UniRef100_A0A0H3LBM9,UniRef:UniRef50_L7N654,UniRef:UniRef90_L7N654
contig_1	Pyrodigal	gene	1219996	1220301	.	+	.	ID=GCA000153685_01156_gene;locus_tag=GCA000153685_01156
contig_1	Pyrodigal	CDS	1219996	1220301	.	+	0	ID=GCA000153685_01156;Name=PE family protein;locus_tag=GCA000153685_01156;product=PE family protein;Parent=GCA000153685_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900272.1,SO:0001217,UniParc:UPI00001A8F8D,UniRef:UniRef100_A0A0E8BIV3,UniRef:UniRef50_A0A2I7W5I3,UniRef:UniRef90_A0A2I7W5I3
contig_1	Pyrodigal	gene	1220769	1221224	.	+	.	ID=GCA000153685_01157_gene;locus_tag=GCA000153685_01157;gene=cel12b
contig_1	Pyrodigal	CDS	1220769	1221224	.	+	0	ID=GCA000153685_01157;Name=putative cellulase Cel12b;locus_tag=GCA000153685_01157;product=putative cellulase Cel12b;Dbxref=GO:0008810,GO:0051275;gene=cel12b;Parent=GCA000153685_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900273.1,SO:0001217,UniParc:UPI00000D5F57,UniRef:UniRef100_O53438,UniRef:UniRef50_O53438,UniRef:UniRef90_O53438;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	1221639	1224200	.	+	.	ID=GCA000153685_01158_gene;locus_tag=GCA000153685_01158
contig_1	Pyrodigal	CDS	1221639	1224200	.	+	0	ID=GCA000153685_01158;Name=PE-PGRS family protein PE_PGRS22;locus_tag=GCA000153685_01158;product=PE-PGRS family protein PE_PGRS22;Parent=GCA000153685_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886108.1,SO:0001217,UniParc:UPI00000D4F9A,UniRef:UniRef100_Q79FS5,UniRef:UniRef50_Q79FS5,UniRef:UniRef90_Q79FS5
contig_1	Pyrodigal	gene	1224418	1225356	.	-	.	ID=GCA000153685_01159_gene;locus_tag=GCA000153685_01159;gene=coaA
contig_1	Pyrodigal	CDS	1224418	1225356	.	-	0	ID=GCA000153685_01159;Name=type I pantothenate kinase;locus_tag=GCA000153685_01159;product=type I pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005737,GO:0015937;gene=coaA;Parent=GCA000153685_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1072,COG:H,KEGG:K00867,RefSeq:WP_003405790.1,SO:0001217,UniParc:UPI0000038DDA,UniRef:UniRef100_P9WPA7,UniRef:UniRef50_P9WPA7,UniRef:UniRef90_P9WPA7;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	1225744	1227024	.	+	.	ID=GCA000153685_01160_gene;locus_tag=GCA000153685_01160;gene=glyA1
contig_1	Pyrodigal	CDS	1225744	1227024	.	+	0	ID=GCA000153685_01160;Name=Serine hydroxymethyltransferase 1;locus_tag=GCA000153685_01160;product=Serine hydroxymethyltransferase 1;Dbxref=GO:0004372,GO:0005829,GO:0019264,GO:0030170,GO:0035999;gene=glyA1;Parent=GCA000153685_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405797.1,SO:0001217,UniParc:UPI0000164FEB,UniRef:UniRef100_P9WGI8,UniRef:UniRef50_P9WGI9,UniRef:UniRef90_P9WGI9;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	1227129	1227956	.	+	.	ID=GCA000153685_01161_gene;locus_tag=GCA000153685_01161;gene=desA2
contig_1	Pyrodigal	CDS	1227129	1227956	.	+	0	ID=GCA000153685_01161;Name=Putative acyl-[acyl-carrier-protein] desaturase DesA2;locus_tag=GCA000153685_01161;product=Putative acyl-[acyl-carrier-protein] desaturase DesA2;Dbxref=GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0045300,GO:0046872;gene=desA2;Parent=GCA000153685_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405801.1,SO:0001217,UniParc:UPI00000D5EB1,UniRef:UniRef100_P9WNZ5,UniRef:UniRef50_P9WNZ5,UniRef:UniRef90_P9WNZ5;ec_number=1.14.19.-
contig_1	Infernal	gene	1227447	1227514	.	-	.	ID=GCA000153685_01162_gene;locus_tag=GCA000153685_01162;gene=ASdes
contig_1	Infernal	ncRNA	1227447	1227514	1.5e-10	-	.	ID=GCA000153685_01162;Name=ASdes TB sRNA;locus_tag=GCA000153685_01162;product=ASdes TB sRNA;Dbxref=RFAM:RF01781;Parent=GCA000153685_01162_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01781
contig_1	Pyrodigal	gene	1228167	1229468	.	+	.	ID=GCA000153685_01163_gene;locus_tag=GCA000153685_01163;gene=phoH2
contig_1	Pyrodigal	CDS	1228167	1229468	.	+	0	ID=GCA000153685_01163;Name=Protein PhoH2;locus_tag=GCA000153685_01163;product=Protein PhoH2;Dbxref=GO:0004518,GO:0005524,GO:0005525,GO:0005829,GO:0005886,GO:0016853,GO:0046872;gene=phoH2;Parent=GCA000153685_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07175,RefSeq:WP_003405802.1,SO:0001217,UniParc:UPI00000D5E41,UniRef:UniRef100_O53443,UniRef:UniRef50_O53443,UniRef:UniRef90_O53443;ec_number=5.6.2.5
contig_1	Pyrodigal	gene	1229555	1230430	.	+	.	ID=GCA000153685_01164_gene;locus_tag=GCA000153685_01164
contig_1	Pyrodigal	CDS	1229555	1230430	.	+	0	ID=GCA000153685_01164;Name=putative glycosyl hydrolase;locus_tag=GCA000153685_01164;product=putative glycosyl hydrolase;Parent=GCA000153685_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898725.1,SO:0001217,UniParc:UPI00000D5EAA,UniRef:UniRef100_O53444,UniRef:UniRef50_O53444,UniRef:UniRef90_O53444
contig_1	Pyrodigal	gene	1230433	1231314	.	-	.	ID=GCA000153685_01165_gene;locus_tag=GCA000153685_01165
contig_1	Pyrodigal	CDS	1230433	1231314	.	-	0	ID=GCA000153685_01165;Name=Membrane glycine and proline rich protein;locus_tag=GCA000153685_01165;product=Membrane glycine and proline rich protein;Parent=GCA000153685_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405804.1,SO:0001217,UniParc:UPI00000D0F9A,UniRef:UniRef100_A5U1E4,UniRef:UniRef50_I2A9W0,UniRef:UniRef90_R4M0U2
contig_1	Pyrodigal	gene	1231311	1232735	.	-	.	ID=GCA000153685_01166_gene;locus_tag=GCA000153685_01166;gene=fumC
contig_1	Pyrodigal	CDS	1231311	1232735	.	-	0	ID=GCA000153685_01166;Name=Fumarate hydratase class II;locus_tag=GCA000153685_01166;product=Fumarate hydratase class II;Dbxref=GO:0004333,GO:0005576,GO:0005829,GO:0005886,GO:0006099,GO:0006106,GO:0009274;gene=fumC;Parent=GCA000153685_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_003405805.1,SO:0001217,UniParc:UPI00000D5EA8,UniRef:UniRef100_P9WN93,UniRef:UniRef50_P9WN93,UniRef:UniRef90_P9WN93;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1232766	1233854	.	-	.	ID=GCA000153685_01167_gene;locus_tag=GCA000153685_01167;gene=glpX
contig_1	Pyrodigal	CDS	1232766	1233854	.	-	0	ID=GCA000153685_01167;Name=class II fructose-bisphosphatase;locus_tag=GCA000153685_01167;product=class II fructose-bisphosphatase;Dbxref=GO:0005829,GO:0006071,GO:0006094,GO:0030388,GO:0042132,GO:0046872;gene=glpX;Parent=GCA000153685_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1494,COG:G,KEGG:K02446,RefSeq:WP_003898726.1,SO:0001217,UniParc:UPI00005EE4C9,UniRef:UniRef100_P9WN21,UniRef:UniRef50_P9WN21,UniRef:UniRef90_P9WN21;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	1233976	1234554	.	+	.	ID=GCA000153685_01168_gene;locus_tag=GCA000153685_01168
contig_1	Pyrodigal	CDS	1233976	1234554	.	+	0	ID=GCA000153685_01168;Name=Conserved protein;locus_tag=GCA000153685_01168;product=Conserved protein;Parent=GCA000153685_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002ED1DA8,UniRef:UniRef100_O53448,UniRef:UniRef50_I2A9W3,UniRef:UniRef90_O53448
contig_1	Pyrodigal	gene	1234561	1235718	.	-	.	ID=GCA000153685_01169_gene;locus_tag=GCA000153685_01169
contig_1	Pyrodigal	CDS	1234561	1235718	.	-	0	ID=GCA000153685_01169;Name=Putative transport protein Rv1101c;locus_tag=GCA000153685_01169;product=Putative transport protein Rv1101c;Dbxref=GO:0005886;Parent=GCA000153685_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898727.1,SO:0001217,UniParc:UPI000013A1A6,UniRef:UniRef100_P9WFM3,UniRef:UniRef50_P9WFM3,UniRef:UniRef90_P9WFM3
contig_1	Pyrodigal	gene	1235830	1236141	.	-	.	ID=GCA000153685_01170_gene;locus_tag=GCA000153685_01170;gene=mazF3
contig_1	Pyrodigal	CDS	1235830	1236141	.	-	0	ID=GCA000153685_01170;Name=type II toxin-antitoxin system toxin endoribonuclease MazF3;locus_tag=GCA000153685_01170;product=type II toxin-antitoxin system toxin endoribonuclease MazF3;Dbxref=GO:0003677,GO:0004521,GO:0006402,GO:0016075,GO:0017148,GO:0044003,GO:0045892,GO:0045926,GO:0045927;gene=mazF3;Parent=GCA000153685_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898728,RefSeq:WP_003898728.1,SO:0001217,UniParc:UPI00000D0FFC,UniRef:UniRef100_P9WIH9,UniRef:UniRef50_P9WIH9,UniRef:UniRef90_P9WIH9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1236141	1236461	.	-	.	ID=GCA000153685_01171_gene;locus_tag=GCA000153685_01171;gene=mazE3
contig_1	Pyrodigal	CDS	1236141	1236461	.	-	0	ID=GCA000153685_01171;Name=type II toxin-antitoxin system antitoxin MazE3;locus_tag=GCA000153685_01171;product=type II toxin-antitoxin system antitoxin MazE3;Dbxref=GO:0045926,GO:0097351,GO:0098754;gene=mazE3;Parent=GCA000153685_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405836,KEGG:K26983,RefSeq:WP_003405836.1,SO:0001217,UniParc:UPI00000C1538,UniRef:UniRef100_O53451,UniRef:UniRef50_O53451,UniRef:UniRef90_O53451
contig_1	Pyrodigal	gene	1236471	1237160	.	+	.	ID=GCA000153685_01172_gene;locus_tag=GCA000153685_01172
contig_1	Pyrodigal	CDS	1236471	1237160	.	+	0	ID=GCA000153685_01172;Name=Para-nitrobenzyl esterase;locus_tag=GCA000153685_01172;product=Para-nitrobenzyl esterase;Parent=GCA000153685_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000C1539,UniRef:UniRef100_O53452,UniRef:UniRef50_A0A654ZJT6,UniRef:UniRef90_A0A654ZPC6
contig_1	Pyrodigal	gene	1237481	1237996	.	+	.	ID=GCA000153685_01173_gene;locus_tag=GCA000153685_01173
contig_1	Pyrodigal	CDS	1237481	1237996	.	+	0	ID=GCA000153685_01173;Name=Para-nitrobenzyl esterase;locus_tag=GCA000153685_01173;product=Para-nitrobenzyl esterase;Parent=GCA000153685_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A8F94,UniRef:UniRef100_O53453,UniRef:UniRef50_A0A2I7W5N7,UniRef:UniRef90_A0A2I7W5N7
contig_1	Pyrodigal	gene	1238014	1239126	.	-	.	ID=GCA000153685_01174_gene;locus_tag=GCA000153685_01174
contig_1	Pyrodigal	CDS	1238014	1239126	.	-	0	ID=GCA000153685_01174;Name=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;locus_tag=GCA000153685_01174;product=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;Dbxref=GO:0003854,GO:0004769,GO:0005829,GO:0005886,GO:0006694,GO:0008202,GO:0016042,GO:0016616,GO:0030283,GO:0070403,GO:0102294;Parent=GCA000153685_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405840,KEGG:K16045,RefSeq:WP_003405840.1,SO:0001217,UniParc:UPI00000D5FA3,UniRef:UniRef100_P9WQP7,UniRef:UniRef50_P9WQP7,UniRef:UniRef90_P9WQP7;ec_number=5.3.3.1
contig_1	Pyrodigal	gene	1239136	1239393	.	-	.	ID=GCA000153685_01175_gene;locus_tag=GCA000153685_01175;gene=xseB
contig_1	Pyrodigal	CDS	1239136	1239393	.	-	0	ID=GCA000153685_01175;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000153685_01175;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000153685_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405844.1,SO:0001217,UniParc:UPI000012A315,UniRef:UniRef100_P9WF29,UniRef:UniRef50_Q9X784,UniRef:UniRef90_P9WF29;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1239383	1240630	.	-	.	ID=GCA000153685_01176_gene;locus_tag=GCA000153685_01176;gene=xseA
contig_1	Pyrodigal	CDS	1239383	1240630	.	-	0	ID=GCA000153685_01176;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000153685_01176;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009274,GO:0009318;gene=xseA;Parent=GCA000153685_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03601,RefSeq:WP_003900275.1,SO:0001217,UniParc:UPI0001277FF5,UniRef:UniRef100_A0A0H3L8F5,UniRef:UniRef50_P9WF31,UniRef:UniRef90_P9WF31;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1240627	1241199	.	-	.	ID=GCA000153685_01177_gene;locus_tag=GCA000153685_01177
contig_1	Pyrodigal	CDS	1240627	1241199	.	-	0	ID=GCA000153685_01177;Name=lipid droplet-associated protein;locus_tag=GCA000153685_01177;product=lipid droplet-associated protein;Dbxref=GO:0005829,GO:0005886,GO:0009274;Parent=GCA000153685_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4CF,UniRef:UniRef100_P9WM59,UniRef:UniRef50_P9WM59,UniRef:UniRef90_P9WM59
contig_1	Pyrodigal	gene	1241328	1242362	.	+	.	ID=GCA000153685_01178_gene;locus_tag=GCA000153685_01178;gene=ispH2
contig_1	Pyrodigal	CDS	1241328	1242362	.	+	0	ID=GCA000153685_01178;Name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;locus_tag=GCA000153685_01178;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;Dbxref=GO:0016114,GO:0019288,GO:0046872,GO:0050992,GO:0051539,GO:0051745;gene=ispH2;Parent=GCA000153685_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03527,SO:0001217,UniParc:UPI0001E61F79,UniRef:UniRef100_P9WKG1,UniRef:UniRef50_P9WKG1,UniRef:UniRef90_P9WKG1;ec_number=1.17.7.4
contig_1	Pyrodigal	gene	1242379	1243293	.	-	.	ID=GCA000153685_01179_gene;locus_tag=GCA000153685_01179
contig_1	Pyrodigal	CDS	1242379	1243293	.	-	0	ID=GCA000153685_01179;Name=DUF6542 domain-containing protein;locus_tag=GCA000153685_01179;product=DUF6542 domain-containing protein;Parent=GCA000153685_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000C159B,UniRef:UniRef100_A0A0E8WHS5,UniRef:UniRef50_O86351,UniRef:UniRef90_O86351
contig_1	Pyrodigal	gene	1243425	1244498	.	+	.	ID=GCA000153685_01180_gene;locus_tag=GCA000153685_01180;gene=ychF
contig_1	Pyrodigal	CDS	1243425	1244498	.	+	0	ID=GCA000153685_01180;Name=redox-regulated ATPase YchF;locus_tag=GCA000153685_01180;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0016887;gene=ychF;Parent=GCA000153685_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898732.1,SO:0001217,UniParc:UPI00000D5FDC,UniRef:UniRef100_O53459,UniRef:UniRef50_A0A090KX53,UniRef:UniRef90_O53459
contig_1	Pyrodigal	gene	1244586	1244783	.	+	.	ID=GCA000153685_01181_gene;locus_tag=GCA000153685_01181;gene=vapB32
contig_1	Pyrodigal	CDS	1244586	1244783	.	+	0	ID=GCA000153685_01181;Name=Antitoxin VapB32;locus_tag=GCA000153685_01181;product=Antitoxin VapB32;Dbxref=GO:0005576,GO:0045927;gene=vapB32;Parent=GCA000153685_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405863.1,SO:0001217,UniParc:UPI00000D0FEF,UniRef:UniRef100_P9WJ33,UniRef:UniRef50_P9WJ33,UniRef:UniRef90_P9WJ33
contig_1	Pyrodigal	gene	1244780	1245154	.	+	.	ID=GCA000153685_01182_gene;locus_tag=GCA000153685_01182;gene=vapC32
contig_1	Pyrodigal	CDS	1244780	1245154	.	+	0	ID=GCA000153685_01182;Name=Ribonuclease VapC32;locus_tag=GCA000153685_01182;product=Ribonuclease VapC32;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC32;Parent=GCA000153685_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405865.1,SO:0001217,UniParc:UPI00000D0F38,UniRef:UniRef100_P9WF73,UniRef:UniRef50_P9WF73,UniRef:UniRef90_P9WF73;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1245357	1246055	.	+	.	ID=GCA000153685_01183_gene;locus_tag=GCA000153685_01183
contig_1	Pyrodigal	CDS	1245357	1246055	.	+	0	ID=GCA000153685_01183;Name=putative exported protein;locus_tag=GCA000153685_01183;product=putative exported protein;Parent=GCA000153685_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898733.1,SO:0001217,UniParc:UPI00000D0F2A,UniRef:UniRef100_O06567,UniRef:UniRef50_O06567,UniRef:UniRef90_O06567
contig_1	Pyrodigal	gene	1246185	1246358	.	+	.	ID=GCA000153685_01184_gene;locus_tag=GCA000153685_01184
contig_1	Pyrodigal	CDS	1246185	1246358	.	+	0	ID=GCA000153685_01184;Name=hypothetical protein;locus_tag=GCA000153685_01184;product=hypothetical protein;Parent=GCA000153685_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00030EE8CF,UniRef:UniRef100_O06568,UniRef:UniRef50_O06568,UniRef:UniRef90_O06568
contig_1	Pyrodigal	gene	1246285	1246560	.	-	.	ID=GCA000153685_01185_gene;locus_tag=GCA000153685_01185
contig_1	Pyrodigal	CDS	1246285	1246560	.	-	0	ID=GCA000153685_01185;Name=PE family protein;locus_tag=GCA000153685_01185;product=PE family protein;Parent=GCA000153685_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405867.1,SO:0001217,UniParc:UPI00000D2BF4,UniRef:UniRef100_L7N6A9,UniRef:UniRef50_L7N6A9,UniRef:UniRef90_L7N6A9
contig_1	Pyrodigal	gene	1246803	1247126	.	+	.	ID=GCA000153685_01186_gene;locus_tag=GCA000153685_01186
contig_1	Pyrodigal	CDS	1246803	1247126	.	+	0	ID=GCA000153685_01186;Name=ABM domain-containing protein;locus_tag=GCA000153685_01186;product=ABM domain-containing protein;Parent=GCA000153685_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405871.1,SO:0001217,UniParc:UPI00000D1025,UniRef:UniRef100_O06569,UniRef:UniRef50_R4M4C5,UniRef:UniRef90_R4M4C5
contig_1	Pyrodigal	gene	1247141	1247851	.	-	.	ID=GCA000153685_01187_gene;locus_tag=GCA000153685_01187
contig_1	Pyrodigal	CDS	1247141	1247851	.	-	0	ID=GCA000153685_01187;Name=Guanylate cyclase;locus_tag=GCA000153685_01187;product=Guanylate cyclase;Parent=GCA000153685_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911399.1,SO:0001217,UniParc:UPI0001E61F76,UniRef:UniRef100_O06570,UniRef:UniRef50_A0A2I2L060,UniRef:UniRef90_R4M5P0
contig_1	Pyrodigal	gene	1247873	1248082	.	+	.	ID=GCA000153685_01188_gene;locus_tag=GCA000153685_01188
contig_1	Pyrodigal	CDS	1247873	1248082	.	+	0	ID=GCA000153685_01188;Name=Secreted protein;locus_tag=GCA000153685_01188;product=Secreted protein;Parent=GCA000153685_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911400.1,SO:0001217,UniParc:UPI0001E61F75,UniRef:UniRef100_A0A0H3LEC0,UniRef:UniRef50_J4TC49,UniRef:UniRef90_A0A0H3LEC0
contig_1	Pyrodigal	gene	1248034	1248234	.	-	.	ID=GCA000153685_01189_gene;locus_tag=GCA000153685_01189
contig_1	Pyrodigal	CDS	1248034	1248234	.	-	0	ID=GCA000153685_01189;Name=hypothetical protein;locus_tag=GCA000153685_01189;product=hypothetical protein;Parent=GCA000153685_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB1A,UniRef:UniRef100_O06571,UniRef:UniRef50_O06571,UniRef:UniRef90_O06571
contig_1	Pyrodigal	gene	1248180	1248674	.	-	.	ID=GCA000153685_01190_gene;locus_tag=GCA000153685_01190
contig_1	Pyrodigal	CDS	1248180	1248674	.	-	0	ID=GCA000153685_01190;Name=Guanylate cyclase domain-containing protein;locus_tag=GCA000153685_01190;product=Guanylate cyclase domain-containing protein;Parent=GCA000153685_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405876.1,SO:0001217,UniParc:UPI00000D0F83,UniRef:UniRef100_O06572,UniRef:UniRef50_O06572,UniRef:UniRef90_O06572
contig_1	Pyrodigal	gene	1248877	1250277	.	+	.	ID=GCA000153685_01191_gene;locus_tag=GCA000153685_01191;gene=zwf1
contig_1	Pyrodigal	CDS	1248877	1250277	.	+	0	ID=GCA000153685_01191;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000153685_01191;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0005829,GO:0005886,GO:0006006,GO:0009051,GO:0050661;gene=zwf1;Parent=GCA000153685_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00036,RefSeq:WP_003898735.1,SO:0001217,UniParc:UPI000012AF05,UniRef:UniRef100_P9WN71,UniRef:UniRef50_P9WN71,UniRef:UniRef90_P9WN71;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1250299	1251321	.	+	.	ID=GCA000153685_01192_gene;locus_tag=GCA000153685_01192;gene=gnd
contig_1	Pyrodigal	CDS	1250299	1251321	.	+	0	ID=GCA000153685_01192;Name=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);locus_tag=GCA000153685_01192;product=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);Dbxref=GO:0006098,GO:0016616;gene=gnd;Parent=GCA000153685_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00033,RefSeq:WP_003405880.1,SO:0001217,UniParc:UPI00000D11E6,UniRef:UniRef100_A5U1G9,UniRef:UniRef50_A0A5E6M8K0,UniRef:UniRef90_A5U1G9;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	1251314	1252222	.	-	.	ID=GCA000153685_01193_gene;locus_tag=GCA000153685_01193;gene=bpoB
contig_1	Pyrodigal	CDS	1251314	1252222	.	-	0	ID=GCA000153685_01193;Name=putative peroxidase BpoB (Non-haem peroxidase);locus_tag=GCA000153685_01193;product=putative peroxidase BpoB (Non-haem peroxidase);gene=bpoB;Parent=GCA000153685_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405884.1,SO:0001217,UniParc:UPI0000165275,UniRef:UniRef100_O06575,UniRef:UniRef50_A0A448IXX4,UniRef:UniRef90_O06575
contig_1	Pyrodigal	gene	1252342	1253247	.	+	.	ID=GCA000153685_01194_gene;locus_tag=GCA000153685_01194
contig_1	Pyrodigal	CDS	1252342	1253247	.	+	0	ID=GCA000153685_01194;Name=Epoxide hydrolase;locus_tag=GCA000153685_01194;product=Epoxide hydrolase;Parent=GCA000153685_01194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911402.1,SO:0001217,UniParc:UPI0001E61F73,UniRef:UniRef100_A5U1H1,UniRef:UniRef50_A0A655ISA7,UniRef:UniRef90_A0A655ISA7
contig_1	Pyrodigal	gene	1253267	1254496	.	+	.	ID=GCA000153685_01195_gene;locus_tag=GCA000153685_01195
contig_1	Pyrodigal	CDS	1253267	1254496	.	+	0	ID=GCA000153685_01195;Name=O-acyltransferase WSD1 C-terminal domain-containing protein;locus_tag=GCA000153685_01195;product=O-acyltransferase WSD1 C-terminal domain-containing protein;Parent=GCA000153685_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4D4,UniRef:UniRef100_O06577,UniRef:UniRef50_O06577,UniRef:UniRef90_O06577
contig_1	Pyrodigal	gene	1254500	1255105	.	-	.	ID=GCA000153685_01196_gene;locus_tag=GCA000153685_01196;gene=marR
contig_1	Pyrodigal	CDS	1254500	1255105	.	-	0	ID=GCA000153685_01196;Name=MarR family transcriptional regulator;locus_tag=GCA000153685_01196;product=MarR family transcriptional regulator;gene=marR;Parent=GCA000153685_01196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405892.1,SO:0001217,UniParc:UPI00000D11DC,UniRef:UniRef100_O06578,UniRef:UniRef50_A0A498QD60,UniRef:UniRef90_R4M5P5
contig_1	Pyrodigal	gene	1255102	1256574	.	-	.	ID=GCA000153685_01197_gene;locus_tag=GCA000153685_01197
contig_1	Pyrodigal	CDS	1255102	1256574	.	-	0	ID=GCA000153685_01197;Name=pyruvate%2C phosphate dikinase;locus_tag=GCA000153685_01197;product=pyruvate%2C phosphate dikinase;Parent=GCA000153685_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898737.1,SO:0001217,UniParc:UPI0000164FF0,UniRef:UniRef100_Q7D8T1,UniRef:UniRef50_A0A7D7LRJ7,UniRef:UniRef90_Q7D8T1;ec_number=2.7.9.1
contig_1	Pyrodigal	gene	1256787	1258142	.	-	.	ID=GCA000153685_01198_gene;locus_tag=GCA000153685_01198
contig_1	Pyrodigal	CDS	1256787	1258142	.	-	0	ID=GCA000153685_01198;Name=putative protein Rv1128c;locus_tag=GCA000153685_01198;product=putative protein Rv1128c;Dbxref=GO:0009274;Parent=GCA000153685_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405897.1,SO:0001217,UniParc:UPI00001A8F9B,UniRef:UniRef100_A0A1R3XXG5,UniRef:UniRef50_P9WM57,UniRef:UniRef90_P9WM57
contig_1	Pyrodigal	gene	1258244	1259704	.	-	.	ID=GCA000153685_01199_gene;locus_tag=GCA000153685_01199;gene=prpR
contig_1	Pyrodigal	CDS	1258244	1259704	.	-	0	ID=GCA000153685_01199;Name=HTH-type transcriptional regulator PrpR;locus_tag=GCA000153685_01199;product=HTH-type transcriptional regulator PrpR;Dbxref=GO:0001666,GO:0003677,GO:0003700,GO:0006355,GO:0008203,GO:0019679,GO:0052572;gene=prpR;Parent=GCA000153685_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405904.1,SO:0001217,UniParc:UPI00000D5F11,UniRef:UniRef100_O06581,UniRef:UniRef50_O06581,UniRef:UniRef90_O06581
contig_1	Pyrodigal	gene	1259806	1261305	.	+	.	ID=GCA000153685_01200_gene;locus_tag=GCA000153685_01200;gene=prpD
contig_1	Pyrodigal	CDS	1259806	1261305	.	+	0	ID=GCA000153685_01200;Name=2-methylcitrate dehydratase PrpD;locus_tag=GCA000153685_01200;product=2-methylcitrate dehydratase PrpD;Dbxref=GO:0003994,GO:0005829,GO:0006099,GO:0008203,GO:0009274,GO:0010447,GO:0019629,GO:0047547;gene=prpD;Parent=GCA000153685_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01720,SO:0001217,UniParc:UPI0001E61F71,UniRef:UniRef100_O06582,UniRef:UniRef50_O06582,UniRef:UniRef90_O06582;ec_number=4.2.1.79
contig_1	Pyrodigal	gene	1261302	1262483	.	+	.	ID=GCA000153685_01201_gene;locus_tag=GCA000153685_01201;gene=prpC
contig_1	Pyrodigal	CDS	1261302	1262483	.	+	0	ID=GCA000153685_01201;Name=bifunctional 2-methylcitrate synthase/citrate synthase;locus_tag=GCA000153685_01201;product=bifunctional 2-methylcitrate synthase/citrate synthase;Dbxref=GO:0004108,GO:0005737,GO:0005975,GO:0006099,GO:0019679,GO:0036440,GO:0046912,GO:0050440;gene=prpC;Parent=GCA000153685_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405909.1,SO:0001217,UniParc:UPI00000D120E,UniRef:UniRef100_I6Y9Q3,UniRef:UniRef50_O34002,UniRef:UniRef90_I6Y9Q3;ec_number=2.3.3.5
contig_1	Pyrodigal	gene	1262495	1264225	.	+	.	ID=GCA000153685_01202_gene;locus_tag=GCA000153685_01202
contig_1	Pyrodigal	CDS	1262495	1264225	.	+	0	ID=GCA000153685_01202;Name=Transmembrane protein;locus_tag=GCA000153685_01202;product=Transmembrane protein;Parent=GCA000153685_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405912.1,SO:0001217,UniParc:UPI0000165276,UniRef:UniRef100_O06583,UniRef:UniRef50_A0A024K4L1,UniRef:UniRef90_R4M0X4
contig_1	Pyrodigal	gene	1264237	1266516	.	-	.	ID=GCA000153685_01203_gene;locus_tag=GCA000153685_01203;gene=metE
contig_1	Pyrodigal	CDS	1264237	1266516	.	-	0	ID=GCA000153685_01203;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000153685_01203;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0009086,GO:0032259;gene=metE;Parent=GCA000153685_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405914.1,SO:0001217,UniParc:UPI000012EF79,UniRef:UniRef100_P9WK07,UniRef:UniRef50_P9WK07,UniRef:UniRef90_P9WK07;ec_number=2.1.1.14
contig_1	Infernal	regulatory_region	1266650	1266885	1.8e-12	-	.	ID=FNJOPAJJMO_78;Name=Cobalamin riboswitch aptamer;product=Cobalamin riboswitch aptamer;Dbxref=RFAM:RF00174;inference=profile:Rfam:RF00174;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1267092	1267328	.	+	.	ID=GCA000153685_01204_gene;locus_tag=GCA000153685_01204
contig_1	Pyrodigal	CDS	1267092	1267328	.	+	0	ID=GCA000153685_01204;Name=hypothetical protein;locus_tag=GCA000153685_01204;product=hypothetical protein;Parent=GCA000153685_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405917.1,SO:0001217,UniParc:UPI00000D5F07,UniRef:UniRef100_O06534,UniRef:UniRef50_O06534,UniRef:UniRef90_O06534
contig_1	Pyrodigal	gene	1267442	1269298	.	-	.	ID=GCA000153685_01205_gene;locus_tag=GCA000153685_01205;gene=pPE16
contig_1	Pyrodigal	CDS	1267442	1269298	.	-	0	ID=GCA000153685_01205;Name=putative PPE family protein PPE16;locus_tag=GCA000153685_01205;product=putative PPE family protein PPE16;Dbxref=GO:0052572;gene=pPE16;Parent=GCA000153685_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405919.1,SO:0001217,UniParc:UPI00000C157F,UniRef:UniRef100_P9WI29,UniRef:UniRef50_P9WI28,UniRef:UniRef90_P9WI28
contig_1	Pyrodigal	gene	1269484	1269726	.	+	.	ID=GCA000153685_01206_gene;locus_tag=GCA000153685_01206
contig_1	Pyrodigal	CDS	1269484	1269726	.	+	0	ID=GCA000153685_01206;Name=Beta-ketoadipyl-CoA thiolase;locus_tag=GCA000153685_01206;product=Beta-ketoadipyl-CoA thiolase;Parent=GCA000153685_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405922.1,SO:0001217,UniParc:UPI00000D2BF8,UniRef:UniRef100_L7N682,UniRef:UniRef50_A0A2I7W5P2,UniRef:UniRef90_A0A2I7W5P2
contig_1	Pyrodigal	gene	1269776	1270117	.	+	.	ID=GCA000153685_01207_gene;locus_tag=GCA000153685_01207
contig_1	Pyrodigal	CDS	1269776	1270117	.	+	0	ID=GCA000153685_01207;Name=Enoyl-CoA hydratase/isomerase family protein;locus_tag=GCA000153685_01207;product=Enoyl-CoA hydratase/isomerase family protein;Parent=GCA000153685_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405926.1,SO:0001217,UniParc:UPI00000D5E26,UniRef:UniRef100_O06536,UniRef:UniRef50_A0A7I7L9H2,UniRef:UniRef90_A0A8I0JYM4
contig_1	Pyrodigal	gene	1270642	1271658	.	-	.	ID=GCA000153685_01208_gene;locus_tag=GCA000153685_01208
contig_1	Pyrodigal	CDS	1270642	1271658	.	-	0	ID=GCA000153685_01208;Name=putative oxidoreductase;locus_tag=GCA000153685_01208;product=putative oxidoreductase;Parent=GCA000153685_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405932.1,SO:0001217,UniParc:UPI00000D1044,UniRef:UniRef100_O06538,UniRef:UniRef50_O06538,UniRef:UniRef90_O06538
contig_1	Pyrodigal	gene	1271655	1272155	.	-	.	ID=GCA000153685_01209_gene;locus_tag=GCA000153685_01209
contig_1	Pyrodigal	CDS	1271655	1272155	.	-	0	ID=GCA000153685_01209;Name=Isoprenylcysteine carboxyl methyltransferase;locus_tag=GCA000153685_01209;product=Isoprenylcysteine carboxyl methyltransferase;Parent=GCA000153685_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16168,RefSeq:WP_003405935.1,SO:0001217,UniParc:UPI00000CCB12,UniRef:UniRef100_A5U1I7,UniRef:UniRef50_A0A6I2GNY1,UniRef:UniRef90_A5U1I7
contig_1	Pyrodigal	gene	1272160	1272609	.	-	.	ID=GCA000153685_01210_gene;locus_tag=GCA000153685_01210
contig_1	Pyrodigal	CDS	1272160	1272609	.	-	0	ID=GCA000153685_01210;Name=Integral membrane protein;locus_tag=GCA000153685_01210;product=Integral membrane protein;Parent=GCA000153685_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C552A1,UniRef:UniRef100_A0A0E8XAC1,UniRef:UniRef50_A0A0E8XAC1,UniRef:UniRef90_A0A0E8XAC1
contig_1	Pyrodigal	gene	1272643	1273365	.	+	.	ID=GCA000153685_01211_gene;locus_tag=GCA000153685_01211
contig_1	Pyrodigal	CDS	1272643	1273365	.	+	0	ID=GCA000153685_01211;Name=Integral membrane protein;locus_tag=GCA000153685_01211;product=Integral membrane protein;Parent=GCA000153685_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911379.1,SO:0001217,UniParc:UPI00005EE4D9,UniRef:UniRef100_A5U1I8,UniRef:UniRef50_A5U1I8,UniRef:UniRef90_A5U1I8
contig_1	Pyrodigal	gene	1273373	1274179	.	-	.	ID=GCA000153685_01212_gene;locus_tag=GCA000153685_01212
contig_1	Pyrodigal	CDS	1273373	1274179	.	-	0	ID=GCA000153685_01212;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_01212;product=Enoyl-CoA hydratase;Parent=GCA000153685_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405951.1,SO:0001217,UniParc:UPI00000D5E16,UniRef:UniRef100_A5U1I9,UniRef:UniRef50_A0A654TY69,UniRef:UniRef90_A0A654TY69
contig_1	Pyrodigal	gene	1274322	1275128	.	-	.	ID=GCA000153685_01213_gene;locus_tag=GCA000153685_01213
contig_1	Pyrodigal	CDS	1274322	1275128	.	-	0	ID=GCA000153685_01213;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_01213;product=Enoyl-CoA hydratase;Parent=GCA000153685_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405957.1,SO:0001217,UniParc:UPI00000D5F5D,UniRef:UniRef100_A5U1J0,UniRef:UniRef50_A0A448IXX2,UniRef:UniRef90_A0A655AAK9
contig_1	Pyrodigal	gene	1275232	1276314	.	+	.	ID=GCA000153685_01214_gene;locus_tag=GCA000153685_01214;gene=mcr
contig_1	Pyrodigal	CDS	1275232	1276314	.	+	0	ID=GCA000153685_01214;Name=alpha-methylacyl-CoA racemase;locus_tag=GCA000153685_01214;product=alpha-methylacyl-CoA racemase;Dbxref=GO:0006629,GO:0006637,GO:0008111,GO:0042803;gene=mcr;Parent=GCA000153685_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898740,KEGG:K01796,RefSeq:WP_003898740.1,SO:0001217,UniParc:UPI0000165277,UniRef:UniRef100_O06543,UniRef:UniRef50_O06543,UniRef:UniRef90_O06543;ec_number=5.1.99.4
contig_1	Pyrodigal	gene	1276326	1277078	.	+	.	ID=GCA000153685_01215_gene;locus_tag=GCA000153685_01215
contig_1	Pyrodigal	CDS	1276326	1277078	.	+	0	ID=GCA000153685_01215;Name=putative oxidoreductase Rv1144;locus_tag=GCA000153685_01215;product=putative oxidoreductase Rv1144;Dbxref=GO:0005886,GO:0009274,GO:0016491;Parent=GCA000153685_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405961.1,SO:0001217,UniParc:UPI00000D11F3,UniRef:UniRef100_P9WGQ7,UniRef:UniRef50_P9WGQ7,UniRef:UniRef90_P9WGQ7;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1277206	1277337	.	-	.	ID=GCA000153685_01216_gene;locus_tag=GCA000153685_01216
contig_1	Pyrodigal	CDS	1277206	1277337	.	-	0	ID=GCA000153685_01216;Name=DUF551 domain-containing protein;locus_tag=GCA000153685_01216;product=DUF551 domain-containing protein;Parent=GCA000153685_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405966.1,SO:0001217,UniParc:UPI0001E61EE0,UniRef:UniRef100_Q8VK61,UniRef:UniRef50_B2HSD4,UniRef:UniRef90_Q8VK61
contig_1	Pyrodigal	gene	1277593	1278504	.	+	.	ID=GCA000153685_01217_gene;locus_tag=GCA000153685_01217
contig_1	Pyrodigal	CDS	1277593	1278504	.	+	0	ID=GCA000153685_01217;Name=Membrane transport protein MMPL domain-containing protein;locus_tag=GCA000153685_01217;product=Membrane transport protein MMPL domain-containing protein;Parent=GCA000153685_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900279.1,SO:0001217,UniParc:UPI00000C14CF,UniRef:UniRef100_A5U1J3,UniRef:UniRef50_A0A378UU49,UniRef:UniRef90_A0AAQ2U2P7
contig_1	Pyrodigal	gene	1278468	1279937	.	+	.	ID=GCA000153685_01218_gene;locus_tag=GCA000153685_01218
contig_1	Pyrodigal	CDS	1278468	1279937	.	+	0	ID=GCA000153685_01218;Name=Transmembrane transporter mmpL13b;locus_tag=GCA000153685_01218;product=Transmembrane transporter mmpL13b;Parent=GCA000153685_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B42,UniRef:UniRef100_A0A655HNE1,UniRef:UniRef50_A0A1Y0CCI2,UniRef:UniRef90_A0A0T9V8H1
contig_1	Pyrodigal	gene	1280070	1280720	.	+	.	ID=GCA000153685_01219_gene;locus_tag=GCA000153685_01219
contig_1	Pyrodigal	CDS	1280070	1280720	.	+	0	ID=GCA000153685_01219;Name=Methyltransferase type 11 domain-containing protein;locus_tag=GCA000153685_01219;product=Methyltransferase type 11 domain-containing protein;Parent=GCA000153685_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003405982.1,SO:0001217,UniParc:UPI00000D0F65,UniRef:UniRef100_O06547,UniRef:UniRef50_A0A5S9R976,UniRef:UniRef90_A0A9P2M3H3
contig_1	Pyrodigal	gene	1281470	1282879	.	-	.	ID=GCA000153685_01220_gene;locus_tag=GCA000153685_01220
contig_1	Pyrodigal	CDS	1281470	1282879	.	-	0	ID=GCA000153685_01220;Name=putative protein Rv1945;locus_tag=GCA000153685_01220;product=putative protein Rv1945;Dbxref=GO:0003676,GO:0004519,GO:0008270;Parent=GCA000153685_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005E2F070,UniRef:UniRef100_A0AA44LLU7,UniRef:UniRef50_P9WM55,UniRef:UniRef90_P9WM55
contig_1	Pyrodigal	gene	1283064	1283471	.	+	.	ID=GCA000153685_01221_gene;locus_tag=GCA000153685_01221
contig_1	Pyrodigal	CDS	1283064	1283471	.	+	0	ID=GCA000153685_01221;Name=IS5 family transposase;locus_tag=GCA000153685_01221;product=IS5 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003422389.1,SO:0001217,UniParc:UPI00000C159F,UniRef:UniRef100_L0T897,UniRef:UniRef50_W9G460,UniRef:UniRef90_L0T897
contig_1	Pyrodigal	gene	1283554	1283991	.	+	.	ID=GCA000153685_01222_gene;locus_tag=GCA000153685_01222
contig_1	Pyrodigal	CDS	1283554	1283991	.	+	0	ID=GCA000153685_01222;Name=IS like-2 transposase;locus_tag=GCA000153685_01222;product=IS like-2 transposase;Parent=GCA000153685_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F61A1,UniRef:UniRef100_A0A0H3L7K6,UniRef:UniRef50_A0A0H3L7K6,UniRef:UniRef90_A0A0H3L7K6
contig_1	Pyrodigal	gene	1284075	1284788	.	-	.	ID=GCA000153685_01223_gene;locus_tag=GCA000153685_01223;gene=cobB
contig_1	Pyrodigal	CDS	1284075	1284788	.	-	0	ID=GCA000153685_01223;Name=NAD-dependent protein deacylase;locus_tag=GCA000153685_01223;product=NAD-dependent protein deacylase;Dbxref=GO:0005737,GO:0006281,GO:0006476,GO:0008270,GO:0009274,GO:0017136,GO:0032041,GO:0034979,GO:0036054,GO:0036055,GO:0046969,GO:0046970,GO:0070213,GO:0070403,GO:0097372,GO:0140765,GO:0141222;gene=cobB;Parent=GCA000153685_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406044,BlastRules:WP_011730361,RefSeq:WP_003406044.1,SO:0001217,UniParc:UPI00000D5E2A,UniRef:UniRef100_P9WGG3,UniRef:UniRef50_P9WGG3,UniRef:UniRef90_P9WGG3;ec_number=2.3.1.286
contig_1	Pyrodigal	gene	1284826	1285191	.	+	.	ID=GCA000153685_01224_gene;locus_tag=GCA000153685_01224
contig_1	Pyrodigal	CDS	1284826	1285191	.	+	0	ID=GCA000153685_01224;Name=HTH-type transcriptional regulator Rv1152;locus_tag=GCA000153685_01224;product=HTH-type transcriptional regulator Rv1152;Parent=GCA000153685_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406047.1,SO:0001217,UniParc:UPI00000D6033,UniRef:UniRef100_O06550,UniRef:UniRef90_O06550
contig_1	Pyrodigal	gene	1285169	1286017	.	-	.	ID=GCA000153685_01225_gene;locus_tag=GCA000153685_01225
contig_1	Pyrodigal	CDS	1285169	1286017	.	-	0	ID=GCA000153685_01225;Name=O-methyltransferase;locus_tag=GCA000153685_01225;product=O-methyltransferase;Parent=GCA000153685_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898744.1,SO:0001217,UniParc:UPI00000D5EAC,UniRef:UniRef100_A5U1K1,UniRef:UniRef50_L7V757,UniRef:UniRef90_A0A0U0RXK6
contig_1	Pyrodigal	gene	1286014	1286544	.	-	.	ID=GCA000153685_01226_gene;locus_tag=GCA000153685_01226
contig_1	Pyrodigal	CDS	1286014	1286544	.	-	0	ID=GCA000153685_01226;Name=DUF1697 domain-containing protein;locus_tag=GCA000153685_01226;product=DUF1697 domain-containing protein;Parent=GCA000153685_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_023637376.1,SO:0001217,UniParc:UPI0003A063B9,UniRef:UniRef100_A0A1R3XXV6,UniRef:UniRef50_O06552,UniRef:UniRef90_O06552
contig_1	Pyrodigal	gene	1286600	1287043	.	+	.	ID=GCA000153685_01227_gene;locus_tag=GCA000153685_01227;gene=yzzA
contig_1	Pyrodigal	CDS	1286600	1287043	.	+	0	ID=GCA000153685_01227;Name=F420H(2)-dependent reductase Rv1155;locus_tag=GCA000153685_01227;product=F420H(2)-dependent reductase Rv1155;Dbxref=GO:0010181,GO:0016627,GO:0030170,GO:0042803,GO:0042816,GO:0070967;gene=yzzA;Parent=GCA000153685_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3871,COG:S,RefSeq:WP_003898745.1,SO:0001217,UniParc:UPI00000CCB13,UniRef:UniRef100_O06553,UniRef:UniRef50_O06553,UniRef:UniRef90_O06553;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1287201	1287389	.	+	.	ID=GCA000153685_01228_gene;locus_tag=GCA000153685_01228
contig_1	Pyrodigal	CDS	1287201	1287389	.	+	0	ID=GCA000153685_01228;Name=putative protein Rv1155A;locus_tag=GCA000153685_01228;product=putative protein Rv1155A;Parent=GCA000153685_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406063.1,SO:0001217,UniParc:UPI00000D2BFF,UniRef:UniRef100_A0A089QKZ7,UniRef:UniRef50_A0A089QKZ7,UniRef:UniRef90_A0A089QKZ7
contig_1	Pyrodigal	gene	1287477	1288064	.	+	.	ID=GCA000153685_01229_gene;locus_tag=GCA000153685_01229
contig_1	Pyrodigal	CDS	1287477	1288064	.	+	0	ID=GCA000153685_01229;Name=Conserved protein;locus_tag=GCA000153685_01229;product=Conserved protein;Parent=GCA000153685_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406064.1,SO:0001217,UniParc:UPI00000D1149,UniRef:UniRef100_O06554,UniRef:UniRef50_A0A7I7P9F3,UniRef:UniRef90_O06554
contig_1	Pyrodigal	gene	1288061	1288207	.	+	.	ID=GCA000153685_01230_gene;locus_tag=GCA000153685_01230
contig_1	Pyrodigal	CDS	1288061	1288207	.	+	0	ID=GCA000153685_01230;Name=DUF1059 domain-containing protein;locus_tag=GCA000153685_01230;product=DUF1059 domain-containing protein;Parent=GCA000153685_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406065.1,SO:0001217,UniParc:UPI00000D2C00,UniRef:UniRef100_A0A0H3L8L8,UniRef:UniRef50_E3J433,UniRef:UniRef90_J5DV68
contig_1	Pyrodigal	gene	1288227	1289300	.	-	.	ID=GCA000153685_01231_gene;locus_tag=GCA000153685_01231
contig_1	Pyrodigal	CDS	1288227	1289300	.	-	0	ID=GCA000153685_01231;Name=Conserved ala-%2C pro-rich protein;locus_tag=GCA000153685_01231;product=Conserved ala-%2C pro-rich protein;Parent=GCA000153685_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DD029B,UniRef:UniRef100_A0A9P1LHQ7,UniRef:UniRef50_O06555,UniRef:UniRef90_O06555
contig_1	Pyrodigal	gene	1289350	1290033	.	-	.	ID=GCA000153685_01232_gene;locus_tag=GCA000153685_01232
contig_1	Pyrodigal	CDS	1289350	1290033	.	-	0	ID=GCA000153685_01232;Name=Conserved alanine and proline rich protein;locus_tag=GCA000153685_01232;product=Conserved alanine and proline rich protein;Parent=GCA000153685_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406075.1,SO:0001217,UniParc:UPI00000C14D1,UniRef:UniRef100_A0A1R3XXI3,UniRef:UniRef50_A0A1X2LTD1,UniRef:UniRef90_A0AAX1S9F5
contig_1	Pyrodigal	gene	1290163	1291458	.	+	.	ID=GCA000153685_01233_gene;locus_tag=GCA000153685_01233;gene=pimE
contig_1	Pyrodigal	CDS	1290163	1291458	.	+	0	ID=GCA000153685_01233;Name=mannosyltransferase;locus_tag=GCA000153685_01233;product=mannosyltransferase;Dbxref=GO:0004377,GO:0005886,GO:0008654,GO:0009247,GO:0043750,GO:0046488;gene=pimE;Parent=GCA000153685_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900282.1,SO:0001217,UniParc:UPI000016527A,UniRef:UniRef100_P9WN01,UniRef:UniRef50_P9WN01,UniRef:UniRef90_P9WN01;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	1291455	1291733	.	-	.	ID=GCA000153685_01234_gene;locus_tag=GCA000153685_01234
contig_1	Pyrodigal	CDS	1291455	1291733	.	-	0	ID=GCA000153685_01234;Name=4a-hydroxytetrahydrobiopterin dehydratase;locus_tag=GCA000153685_01234;product=4a-hydroxytetrahydrobiopterin dehydratase;Dbxref=GO:0006729,GO:0008124;Parent=GCA000153685_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01724,SO:0001217,UniParc:UPI0001E624D3,UniRef:UniRef100_A0A0H3LBV2,UniRef:UniRef50_A0R2K7,UniRef:UniRef90_P9WI93;ec_number=4.2.1.96
contig_1	Pyrodigal	gene	1291766	1292191	.	+	.	ID=GCA000153685_01235_gene;locus_tag=GCA000153685_01235;gene=mutT
contig_1	Pyrodigal	CDS	1291766	1292191	.	+	0	ID=GCA000153685_01235;Name=8-oxo-dGTP diphosphatase MutT;locus_tag=GCA000153685_01235;product=8-oxo-dGTP diphosphatase MutT;Dbxref=GO:0006260,GO:0006281,GO:0008413,GO:0035539,GO:0044715,GO:0044716,GO:0046872;gene=mutT;Parent=GCA000153685_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003246544,BlastRules:WP_003406084,RefSeq:WP_003406084.1,SO:0001217,UniParc:UPI00000D1042,UniRef:UniRef100_P9WIY1,UniRef:UniRef50_P9WIY1,UniRef:UniRef90_P9WIY1;ec_number=3.6.1.55
contig_1	Pyrodigal	gene	1292499	1296197	.	+	.	ID=GCA000153685_01236_gene;locus_tag=GCA000153685_01236;gene=narG
contig_1	Pyrodigal	CDS	1292499	1296197	.	+	0	ID=GCA000153685_01236;Name=nitrate reductase subunit alpha;locus_tag=GCA000153685_01236;product=nitrate reductase subunit alpha;Dbxref=GO:0005576,GO:0005886,GO:0008940,GO:0009274,GO:0009325,GO:0016020,GO:0036294,GO:0042126,GO:0042128,GO:0043546,GO:0043602,GO:0046872,GO:0051539,GO:0071249,GO:0071732,GO:0160182;gene=narG;Parent=GCA000153685_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00370,RefSeq:WP_003898748.1,SO:0001217,UniParc:UPI00000D11C8,UniRef:UniRef100_P9WJQ3,UniRef:UniRef50_P9WJQ3,UniRef:UniRef90_P9WJQ3,VFDB:VFC0272,VFDB:VFG001391;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1296236	1297912	.	+	.	ID=GCA000153685_01237_gene;locus_tag=GCA000153685_01237;gene=narH
contig_1	Pyrodigal	CDS	1296236	1297912	.	+	0	ID=GCA000153685_01237;Name=nitrate reductase subunit beta;locus_tag=GCA000153685_01237;product=nitrate reductase subunit beta;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narH;Parent=GCA000153685_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00371,RefSeq:WP_003898749.1,SO:0001217,UniParc:UPI0000164FF7,UniRef:UniRef100_A0A0H3L7L9,UniRef:UniRef50_A0A163PVZ5,UniRef:UniRef90_A0A0H3L7L9,VFDB:VFC0272,VFDB:VFG001814;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1297909	1298574	.	+	.	ID=GCA000153685_01238_gene;locus_tag=GCA000153685_01238;gene=narJ
contig_1	Pyrodigal	CDS	1297909	1298574	.	+	0	ID=GCA000153685_01238;Name=nitrate reductase subunit delta;locus_tag=GCA000153685_01238;product=nitrate reductase subunit delta;Dbxref=GO:0051082,GO:0051131;gene=narJ;Parent=GCA000153685_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00373,RefSeq:WP_003911426.1,SO:0001217,UniParc:UPI0000EF4811,UniRef:UniRef100_A0A0H3L801,UniRef:UniRef50_A0A4V6IC56,UniRef:UniRef90_A0A0H3L801,VFDB:VFC0272,VFDB:VFG001815
contig_1	Pyrodigal	gene	1298577	1299317	.	+	.	ID=GCA000153685_01239_gene;locus_tag=GCA000153685_01239;gene=narI
contig_1	Pyrodigal	CDS	1298577	1299317	.	+	0	ID=GCA000153685_01239;Name=nitrate reductase subunit gamma;locus_tag=GCA000153685_01239;product=nitrate reductase subunit gamma;Dbxref=GO:0008940,GO:0009325,GO:0019645;gene=narI;Parent=GCA000153685_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406095.1,SO:0001217,UniParc:UPI00000CCB18,UniRef:UniRef100_A5U1L3,UniRef:UniRef50_F5XED3,UniRef:UniRef90_Q7D8Q6,VFDB:VFC0272,VFDB:VFG001816;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1299339	1301225	.	+	.	ID=GCA000153685_01240_gene;locus_tag=GCA000153685_01240;gene=typA
contig_1	Pyrodigal	CDS	1299339	1301225	.	+	0	ID=GCA000153685_01240;Name=translational GTPase TypA;locus_tag=GCA000153685_01240;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA000153685_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406099.1,SO:0001217,UniParc:UPI00000D5E79,UniRef:UniRef100_O06563,UniRef:UniRef50_O06563,UniRef:UniRef90_O06563
contig_1	Pyrodigal	gene	1301323	1303230	.	+	.	ID=GCA000153685_01241_gene;locus_tag=GCA000153685_01241;gene=lpqW
contig_1	Pyrodigal	CDS	1301323	1303230	.	+	0	ID=GCA000153685_01241;Name=lipoarabinomannan biosynthesis protein LpqW;locus_tag=GCA000153685_01241;product=lipoarabinomannan biosynthesis protein LpqW;Dbxref=GO:0005576,GO:0008654,GO:0009247,GO:0015833,GO:0016020,GO:0046488,GO:1904680;gene=lpqW;Parent=GCA000153685_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406102,RefSeq:WP_003406102.1,SO:0001217,UniParc:UPI00000D5E58,UniRef:UniRef100_P9WGU7,UniRef:UniRef50_A0R2I8,UniRef:UniRef90_P9WGU7
contig_1	Pyrodigal	gene	1303258	1303863	.	-	.	ID=GCA000153685_01242_gene;locus_tag=GCA000153685_01242
contig_1	Pyrodigal	CDS	1303258	1303863	.	-	0	ID=GCA000153685_01242;Name=Transcriptional regulatory protein;locus_tag=GCA000153685_01242;product=Transcriptional regulatory protein;Parent=GCA000153685_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406104.1,SO:0001217,UniParc:UPI00000D5FC7,UniRef:UniRef100_A5U1L6,UniRef:UniRef50_Q73WP6,UniRef:UniRef90_A5U1L6
contig_1	Pyrodigal	gene	1303935	1304975	.	-	.	ID=GCA000153685_01243_gene;locus_tag=GCA000153685_01243;gene=pPE17
contig_1	Pyrodigal	CDS	1303935	1304975	.	-	0	ID=GCA000153685_01243;Name=PPE family protein PPE17;locus_tag=GCA000153685_01243;product=PPE family protein PPE17;Dbxref=GO:0005576,GO:0009986,GO:0052572;gene=pPE17;Parent=GCA000153685_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898751.1,SO:0001217,UniParc:UPI00000D5F0D,UniRef:UniRef100_P9WI27,UniRef:UniRef50_P9WI27,UniRef:UniRef90_P9WI27
contig_1	Pyrodigal	gene	1304993	1305295	.	-	.	ID=GCA000153685_01244_gene;locus_tag=GCA000153685_01244;gene=lipX
contig_1	Pyrodigal	CDS	1304993	1305295	.	-	0	ID=GCA000153685_01244;Name=lipase/esterase LipX;locus_tag=GCA000153685_01244;product=lipase/esterase LipX;Dbxref=GO:0004806,GO:0005576,GO:0008126,GO:0052572,GO:0071555;gene=lipX;Parent=GCA000153685_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898752,RefSeq:WP_003898752.1,SO:0001217,UniParc:UPI000016527C,UniRef:UniRef100_Q79FR5,UniRef:UniRef50_Q79FR5,UniRef:UniRef90_Q79FR5;ec_number=3.1.1.6
contig_1	Pyrodigal	gene	1305475	1306386	.	+	.	ID=GCA000153685_01245_gene;locus_tag=GCA000153685_01245;gene=mshB
contig_1	Pyrodigal	CDS	1305475	1306386	.	+	0	ID=GCA000153685_01245;Name=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;locus_tag=GCA000153685_01245;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;Dbxref=GO:0008270,GO:0010125,GO:0035595;gene=mshB;Parent=GCA000153685_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406154.1,SO:0001217,UniParc:UPI00000D5E22,UniRef:UniRef100_P9WJN3,UniRef:UniRef50_P9WJN3,UniRef:UniRef90_P9WJN3;ec_number=3.5.1.103
contig_1	Pyrodigal	gene	1306419	1306526	.	+	.	ID=GCA000153685_01246_gene;locus_tag=GCA000153685_01246
contig_1	Pyrodigal	CDS	1306419	1306526	.	+	0	ID=GCA000153685_01246;Name=hypothetical protein;locus_tag=GCA000153685_01246;product=hypothetical protein;Parent=GCA000153685_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D279,UniRef:UniRef100_A0A653F602,UniRef:UniRef50_A0A653F602,UniRef:UniRef90_A0A653F602
contig_1	Pyrodigal	gene	1306478	1306918	.	+	.	ID=GCA000153685_01247_gene;locus_tag=GCA000153685_01247
contig_1	Pyrodigal	CDS	1306478	1306918	.	+	0	ID=GCA000153685_01247;Name=Integral membrane protein;locus_tag=GCA000153685_01247;product=Integral membrane protein;Parent=GCA000153685_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406163.1,SO:0001217,UniParc:UPI00001A8FA5,UniRef:UniRef100_O50427,UniRef:UniRef50_A0A1A3CE52,UniRef:UniRef90_O50427
contig_1	Pyrodigal	gene	1306926	1307852	.	-	.	ID=GCA000153685_01248_gene;locus_tag=GCA000153685_01248
contig_1	Pyrodigal	CDS	1306926	1307852	.	-	0	ID=GCA000153685_01248;Name=PE domain-containing protein;locus_tag=GCA000153685_01248;product=PE domain-containing protein;Parent=GCA000153685_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898753.1,SO:0001217,UniParc:UPI00000D5E5F,UniRef:UniRef100_L7N693,UniRef:UniRef50_A0A7Z7IIM5,UniRef:UniRef90_R4M139
contig_1	Pyrodigal	gene	1308243	1310672	.	+	.	ID=GCA000153685_01249_gene;locus_tag=GCA000153685_01249;gene=fbiC
contig_1	Pyrodigal	CDS	1308243	1310672	.	+	0	ID=GCA000153685_01249;Name=bifunctional FO biosynthesis protein CofGH;locus_tag=GCA000153685_01249;product=bifunctional FO biosynthesis protein CofGH;Dbxref=GO:0005886,GO:0016765,GO:0044689,GO:0046872,GO:0051409,GO:0051539,GO:0141093,GO:2001121;gene=fbiC;Parent=GCA000153685_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11779,SO:0001217,UniParc:UPI00039DFAC2,UniRef:UniRef100_P9WP77,UniRef:UniRef50_P9WP77,UniRef:UniRef90_P9WP77;ec_number=4.3.1.32
contig_1	Pyrodigal	gene	1310840	1311172	.	-	.	ID=GCA000153685_01250_gene;locus_tag=GCA000153685_01250
contig_1	Pyrodigal	CDS	1310840	1311172	.	-	0	ID=GCA000153685_01250;Name=Low molecular weight T-cell antigen TB8-4;locus_tag=GCA000153685_01250;product=Low molecular weight T-cell antigen TB8-4;Parent=GCA000153685_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406169.1,SO:0001217,UniParc:UPI00000D0F29,UniRef:UniRef100_O50430,UniRef:UniRef50_O50430,UniRef:UniRef90_O50430
contig_1	Pyrodigal	gene	1311373	1313397	.	-	.	ID=GCA000153685_01251_gene;locus_tag=GCA000153685_01251
contig_1	Pyrodigal	CDS	1311373	1313397	.	-	0	ID=GCA000153685_01251;Name=NADPH dependent 2%2C4-dienoyl-CoA reductase;locus_tag=GCA000153685_01251;product=NADPH dependent 2%2C4-dienoyl-CoA reductase;Parent=GCA000153685_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898755.1,SO:0001217,UniParc:UPI0000164FF9,UniRef:UniRef100_A0A0H3L8N7,UniRef:UniRef50_A0A7W8QM18,UniRef:UniRef90_A0A0H3L8N7
contig_1	Pyrodigal	gene	1313394	1313963	.	-	.	ID=GCA000153685_01252_gene;locus_tag=GCA000153685_01252
contig_1	Pyrodigal	CDS	1313394	1313963	.	-	0	ID=GCA000153685_01252;Name=putative transcriptional regulator Rv1176c;locus_tag=GCA000153685_01252;product=putative transcriptional regulator Rv1176c;Dbxref=GO:0003677,GO:0005737,GO:0009274;Parent=GCA000153685_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406182.1,SO:0001217,UniParc:UPI000016527E,UniRef:UniRef100_O50432,UniRef:UniRef50_O50432,UniRef:UniRef90_O50432
contig_1	Pyrodigal	gene	1314176	1314502	.	+	.	ID=GCA000153685_01253_gene;locus_tag=GCA000153685_01253;gene=fdxA
contig_1	Pyrodigal	CDS	1314176	1314502	.	+	0	ID=GCA000153685_01253;Name=ferredoxin;locus_tag=GCA000153685_01253;product=ferredoxin;Dbxref=GO:0009055,GO:0046872;gene=fdxA;Parent=GCA000153685_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406185.1,SO:0001217,UniParc:UPI00000D0F3F,UniRef:UniRef100_O50433,UniRef:UniRef50_P24496,UniRef:UniRef90_O50433
contig_1	Pyrodigal	gene	1314535	1315623	.	+	.	ID=GCA000153685_01254_gene;locus_tag=GCA000153685_01254;gene=dapC
contig_1	Pyrodigal	CDS	1314535	1315623	.	+	0	ID=GCA000153685_01254;Name=succinyldiaminopimelate transaminase;locus_tag=GCA000153685_01254;product=succinyldiaminopimelate transaminase;Dbxref=GO:0003824,GO:0005886,GO:0008483,GO:0009058,GO:0030170;gene=dapC;Parent=GCA000153685_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14254,RefSeq:WP_003898756.1,SO:0001217,UniParc:UPI00000D4F76,UniRef:UniRef100_A5U1M7,UniRef:UniRef50_O50434,UniRef:UniRef90_O50434;ec_number=2.6.1.17
contig_1	Pyrodigal	gene	1315651	1318470	.	-	.	ID=GCA000153685_01255_gene;locus_tag=GCA000153685_01255
contig_1	Pyrodigal	CDS	1315651	1318470	.	-	0	ID=GCA000153685_01255;Name=Helicase ATP-binding domain-containing protein;locus_tag=GCA000153685_01255;product=Helicase ATP-binding domain-containing protein;Parent=GCA000153685_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406189.1,SO:0001217,UniParc:UPI00000C152C,UniRef:UniRef100_O50435,UniRef:UniRef50_O50435,UniRef:UniRef90_O50435
contig_1	Pyrodigal	gene	1318897	1325154	.	+	.	ID=GCA000153685_01256_gene;locus_tag=GCA000153685_01256;gene=pks2
contig_1	Pyrodigal	CDS	1318897	1325154	.	+	0	ID=GCA000153685_01256;Name=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;locus_tag=GCA000153685_01256;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;Dbxref=GO:0004315,GO:0005886,GO:0016491,GO:0031177,GO:0034081,GO:1902321;gene=pks2;Parent=GCA000153685_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406192.1,SO:0001217,UniParc:UPI00005EE4E1,UniRef:UniRef100_A0A089QRB9,UniRef:UniRef50_A0A089QRB9,UniRef:UniRef90_A0A089QRB9;ec_number=2.3.1.252
contig_1	Pyrodigal	gene	1325207	1326625	.	+	.	ID=GCA000153685_01257_gene;locus_tag=GCA000153685_01257;gene=papA3
contig_1	Pyrodigal	CDS	1325207	1326625	.	+	0	ID=GCA000153685_01257;Name=acyltransferase PapA3;locus_tag=GCA000153685_01257;product=acyltransferase PapA3;Dbxref=GO:0005991,GO:0009247,GO:0016020,GO:0016409;gene=papA3;Parent=GCA000153685_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898759,KEGG:K23156,RefSeq:WP_003898759.1,SO:0001217,UniParc:UPI00000D1152,UniRef:UniRef100_P9WIK5,UniRef:UniRef50_P9WIK5,UniRef:UniRef90_P9WIK5;ec_number=2.3.1.279
contig_1	Pyrodigal	gene	1326692	1329700	.	+	.	ID=GCA000153685_01258_gene;locus_tag=GCA000153685_01258;gene=mmpL10
contig_1	Pyrodigal	CDS	1326692	1329700	.	+	0	ID=GCA000153685_01258;Name=RND transporter MmpL10;locus_tag=GCA000153685_01258;product=RND transporter MmpL10;Dbxref=GO:0005886;gene=mmpL10;Parent=GCA000153685_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898761,RefSeq:WP_003898761.1,SO:0001217,UniParc:UPI000012F277,UniRef:UniRef100_P9WJU1,UniRef:UniRef50_P9WJU1,UniRef:UniRef90_P9WJU1
contig_1	Pyrodigal	gene	1329704	1330795	.	-	.	ID=GCA000153685_01259_gene;locus_tag=GCA000153685_01259;gene=chp2
contig_1	Pyrodigal	CDS	1329704	1330795	.	-	0	ID=GCA000153685_01259;Name=Diacyltrehalose acyltransferase Chp2;locus_tag=GCA000153685_01259;product=Diacyltrehalose acyltransferase Chp2;Dbxref=GO:0005886,GO:0006629,GO:0009274,GO:0016746;gene=chp2;Parent=GCA000153685_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22796,SO:0001217,UniParc:UPI0005E1AB82,UniRef:UniRef100_O50440,UniRef:UniRef50_O50440,UniRef:UniRef90_O50440;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1330948	1332684	.	-	.	ID=GCA000153685_01260_gene;locus_tag=GCA000153685_01260;gene=fadD21
contig_1	Pyrodigal	CDS	1330948	1332684	.	-	0	ID=GCA000153685_01260;Name=fatty-acid--AMP ligase FAAL21/FadD21;locus_tag=GCA000153685_01260;product=fatty-acid--AMP ligase FAAL21/FadD21;Dbxref=GO:0005886,GO:0006633,GO:0016874,GO:0070566;gene=fadD21;Parent=GCA000153685_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12423,RefSeq:WP_003406196.1,SO:0001217,UniParc:UPI000012A5C2,UniRef:UniRef100_P9WQ49,UniRef:UniRef50_P95141,UniRef:UniRef90_P9WQ49;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	1332861	1334477	.	-	.	ID=GCA000153685_01261_gene;locus_tag=GCA000153685_01261
contig_1	Pyrodigal	CDS	1332861	1334477	.	-	0	ID=GCA000153685_01261;Name=Conserved protein;locus_tag=GCA000153685_01261;product=Conserved protein;Parent=GCA000153685_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406197.1,SO:0001217,UniParc:UPI0000164FFB,UniRef:UniRef100_A0A1R3XXM3,UniRef:UniRef50_B2HS84,UniRef:UniRef90_O50442
contig_1	Pyrodigal	gene	1334562	1336193	.	+	.	ID=GCA000153685_01262_gene;locus_tag=GCA000153685_01262;gene=pruA
contig_1	Pyrodigal	CDS	1334562	1336193	.	+	0	ID=GCA000153685_01262;Name=L-glutamate gamma-semialdehyde dehydrogenase;locus_tag=GCA000153685_01262;product=L-glutamate gamma-semialdehyde dehydrogenase;Dbxref=GO:0003842,GO:0010133;gene=pruA;Parent=GCA000153685_01262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00294,RefSeq:WP_003900286.1,SO:0001217,UniParc:UPI00000D1022,UniRef:UniRef100_O50443,UniRef:UniRef50_O50443,UniRef:UniRef90_O50443;ec_number=1.2.1.88
contig_1	Pyrodigal	gene	1336193	1337182	.	+	.	ID=GCA000153685_01263_gene;locus_tag=GCA000153685_01263
contig_1	Pyrodigal	CDS	1336193	1337182	.	+	0	ID=GCA000153685_01263;Name=proline dehydrogenase;locus_tag=GCA000153685_01263;product=proline dehydrogenase;Parent=GCA000153685_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900287.1,SO:0001217,UniParc:UPI00000D5EC4,UniRef:UniRef100_O50444,UniRef:UniRef50_O50444,UniRef:UniRef90_O50444
contig_1	Pyrodigal	gene	1337264	1338136	.	+	.	ID=GCA000153685_01264_gene;locus_tag=GCA000153685_01264;gene=sigI
contig_1	Pyrodigal	CDS	1337264	1338136	.	+	0	ID=GCA000153685_01264;Name=RNA polymerase sigma factor SigI;locus_tag=GCA000153685_01264;product=RNA polymerase sigma factor SigI;Dbxref=GO:0003677,GO:0006352,GO:0009409,GO:0016987;gene=sigI;Parent=GCA000153685_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406207.1,SO:0001217,UniParc:UPI00000D0FF1,UniRef:UniRef100_P9WGH3,UniRef:UniRef50_P9WGH3,UniRef:UniRef90_P9WGH3
contig_1	Pyrodigal	gene	1338158	1339030	.	+	.	ID=GCA000153685_01265_gene;locus_tag=GCA000153685_01265
contig_1	Pyrodigal	CDS	1338158	1339030	.	+	0	ID=GCA000153685_01265;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000153685_01265;product=AB hydrolase-1 domain-containing protein;Parent=GCA000153685_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911431.1,SO:0001217,UniParc:UPI0001901F25,UniRef:UniRef100_O86348,UniRef:UniRef50_O86348,UniRef:UniRef90_O86348
contig_1	Pyrodigal	gene	1339103	1340017	.	+	.	ID=GCA000153685_01266_gene;locus_tag=GCA000153685_01266;gene=menH
contig_1	Pyrodigal	CDS	1339103	1340017	.	+	0	ID=GCA000153685_01266;Name=Proline iminopeptidase;locus_tag=GCA000153685_01266;product=Proline iminopeptidase;gene=menH;Parent=GCA000153685_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_003406215.1,SO:0001217,UniParc:UPI0000165280,UniRef:UniRef100_O05293,UniRef:UniRef50_A0A378TPA1,UniRef:UniRef90_A0A498QXI8
contig_1	Pyrodigal	gene	1340099	1340926	.	+	.	ID=GCA000153685_01267_gene;locus_tag=GCA000153685_01267
contig_1	Pyrodigal	CDS	1340099	1340926	.	+	0	ID=GCA000153685_01267;Name=Alpha/beta hydrolase;locus_tag=GCA000153685_01267;product=Alpha/beta hydrolase;Parent=GCA000153685_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898763.1,SO:0001217,UniParc:UPI00000D0F82,UniRef:UniRef100_O05294,UniRef:UniRef50_O05294,UniRef:UniRef90_O05294
contig_1	Pyrodigal	gene	1340966	1342387	.	+	.	ID=GCA000153685_01268_gene;locus_tag=GCA000153685_01268
contig_1	Pyrodigal	CDS	1340966	1342387	.	+	0	ID=GCA000153685_01268;Name=Fatty-acid-CoA ligase FadD36;locus_tag=GCA000153685_01268;product=Fatty-acid-CoA ligase FadD36;Parent=GCA000153685_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406218.1,SO:0001217,UniParc:UPI00000D5E9C,UniRef:UniRef100_A5U1P1,UniRef:UniRef50_A0A1Z4ELQ8,UniRef:UniRef90_A5U1P1
contig_1	Pyrodigal	gene	1342420	1343685	.	-	.	ID=GCA000153685_01269_gene;locus_tag=GCA000153685_01269
contig_1	Pyrodigal	CDS	1342420	1343685	.	-	0	ID=GCA000153685_01269;Name=Transcriptional activator protein;locus_tag=GCA000153685_01269;product=Transcriptional activator protein;Parent=GCA000153685_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900289.1,SO:0001217,UniParc:UPI000127809C,UniRef:UniRef100_A0A0H3LBY3,UniRef:UniRef50_A0A7I7NPH9,UniRef:UniRef90_A0A0H3LBY3
contig_1	Pyrodigal	gene	1344169	1344474	.	+	.	ID=GCA000153685_01270_gene;locus_tag=GCA000153685_01270;gene=pE13
contig_1	Pyrodigal	CDS	1344169	1344474	.	+	0	ID=GCA000153685_01270;Name=PE family protein PE13;locus_tag=GCA000153685_01270;product=PE family protein PE13;Dbxref=GO:0005576;gene=pE13;Parent=GCA000153685_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D982,UniRef:UniRef100_A0A0E9AGF2,UniRef:UniRef50_Q79FR3,UniRef:UniRef90_Q79FR3
contig_1	Pyrodigal	gene	1344521	1345696	.	+	.	ID=GCA000153685_01271_gene;locus_tag=GCA000153685_01271;gene=pPE18
contig_1	Pyrodigal	CDS	1344521	1345696	.	+	0	ID=GCA000153685_01271;Name=PPE family protein PPE18;locus_tag=GCA000153685_01271;product=PPE family protein PPE18;Dbxref=GO:0005576,GO:0009986,GO:0052572;gene=pPE18;Parent=GCA000153685_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898765.1,SO:0001217,UniParc:UPI00000317C0,UniRef:UniRef100_L7N675,UniRef:UniRef50_L7N675,UniRef:UniRef90_L7N675
contig_1	Pyrodigal	gene	1345831	1346127	.	+	.	ID=GCA000153685_01272_gene;locus_tag=GCA000153685_01272;gene=esxJ
contig_1	Pyrodigal	CDS	1345831	1346127	.	+	0	ID=GCA000153685_01272;Name=type VII secretion system ESX-5 protein EsxJ;locus_tag=GCA000153685_01272;product=type VII secretion system ESX-5 protein EsxJ;Dbxref=GO:0005576;gene=esxJ;Parent=GCA000153685_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405345,RefSeq:WP_003421604.1,SO:0001217,UniParc:UPI000012A195,UniRef:UniRef100_P9WNJ7,UniRef:UniRef50_P9WNJ7,UniRef:UniRef90_P9WNJ7
contig_1	Pyrodigal	gene	1346178	1346462	.	+	.	ID=GCA000153685_01273_gene;locus_tag=GCA000153685_01273;gene=esxL
contig_1	Pyrodigal	CDS	1346178	1346462	.	+	0	ID=GCA000153685_01273;Name=type VII secretion system ESX-5 protein EsxL;locus_tag=GCA000153685_01273;product=type VII secretion system ESX-5 protein EsxL;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=esxL;Parent=GCA000153685_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898766,RefSeq:WP_003898766.1,SO:0001217,UniParc:UPI000012A196,UniRef:UniRef100_P9WNJ5,UniRef:UniRef50_P9WNJ5,UniRef:UniRef90_P9WNJ5
contig_1	Pyrodigal	gene	1346530	1347777	.	-	.	ID=GCA000153685_01274_gene;locus_tag=GCA000153685_01274;gene=tnp
contig_1	Pyrodigal	CDS	1346530	1347777	.	-	0	ID=GCA000153685_01274;Name=IS256 family IS1081 transposase;locus_tag=GCA000153685_01274;product=IS256 family IS1081 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000153685_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1081,RefSeq:WP_003900290.1,SO:0001217,UniParc:UPI00012780CF,UniRef:UniRef100_A0A0H3LC10,UniRef:UniRef50_P60230,UniRef:UniRef90_P60230
contig_1	Pyrodigal	gene	1348115	1349392	.	+	.	ID=GCA000153685_01275_gene;locus_tag=GCA000153685_01275
contig_1	Pyrodigal	CDS	1348115	1349392	.	+	0	ID=GCA000153685_01275;Name=Conserved membrane transporter;locus_tag=GCA000153685_01275;product=Conserved membrane transporter;Parent=GCA000153685_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406233.1,SO:0001217,UniParc:UPI00000D5F05,UniRef:UniRef100_A0A0H3L8U2,UniRef:UniRef50_Q73WT1,UniRef:UniRef90_A0A0U0QQS0
contig_1	Pyrodigal	gene	1349389	1350375	.	-	.	ID=GCA000153685_01276_gene;locus_tag=GCA000153685_01276;gene=dapD
contig_1	Pyrodigal	CDS	1349389	1350375	.	-	0	ID=GCA000153685_01276;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;locus_tag=GCA000153685_01276;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;Dbxref=GO:0000287,GO:0005737,GO:0005886,GO:0008666,GO:0009089,GO:0009274,GO:0019877,GO:0031402,GO:0120226;gene=dapD;Parent=GCA000153685_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001900F48,UniRef:UniRef100_A0A0H3LEP0,UniRef:UniRef50_P9WP21,UniRef:UniRef90_P9WP21;ec_number=2.3.1.117
contig_1	Pyrodigal	gene	1350433	1351497	.	+	.	ID=GCA000153685_01277_gene;locus_tag=GCA000153685_01277;gene=dapE
contig_1	Pyrodigal	CDS	1350433	1351497	.	+	0	ID=GCA000153685_01277;Name=succinyl-diaminopimelate desuccinylase;locus_tag=GCA000153685_01277;product=succinyl-diaminopimelate desuccinylase;Dbxref=GO:0006526,GO:0008777,GO:0009014,GO:0009089,GO:0019877,GO:0046872;gene=dapE;Parent=GCA000153685_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406235.1,SO:0001217,UniParc:UPI00000D11E1,UniRef:UniRef100_P9WHS9,UniRef:UniRef50_A0R2G4,UniRef:UniRef90_P9WHS9;ec_number=3.5.1.18
contig_1	Pyrodigal	gene	1351494	1352078	.	-	.	ID=GCA000153685_01278_gene;locus_tag=GCA000153685_01278
contig_1	Pyrodigal	CDS	1351494	1352078	.	-	0	ID=GCA000153685_01278;Name=AAA family ATPase;locus_tag=GCA000153685_01278;product=AAA family ATPase;Parent=GCA000153685_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406236.1,SO:0001217,UniParc:UPI00000D0F39,UniRef:UniRef100_O05304,UniRef:UniRef50_O05304,UniRef:UniRef90_O05304
contig_1	Pyrodigal	gene	1352109	1353797	.	-	.	ID=GCA000153685_01279_gene;locus_tag=GCA000153685_01279
contig_1	Pyrodigal	CDS	1352109	1353797	.	-	0	ID=GCA000153685_01279;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000153685_01279;product=AAA+ ATPase domain-containing protein;Parent=GCA000153685_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406237.1,SO:0001217,UniParc:UPI00000D11D3,UniRef:UniRef100_O05305,UniRef:UniRef50_A0A7I9XYY5,UniRef:UniRef90_O05305
contig_1	Pyrodigal	gene	1353892	1354455	.	+	.	ID=GCA000153685_01280_gene;locus_tag=GCA000153685_01280;gene=log
contig_1	Pyrodigal	CDS	1353892	1354455	.	+	0	ID=GCA000153685_01280;Name=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;locus_tag=GCA000153685_01280;product=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;Dbxref=GO:0005829,GO:0009691,GO:0016799,GO:0102682;gene=log;Parent=GCA000153685_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22522,RefSeq:WP_003898770.1,SO:0001217,UniParc:UPI00000D10A3,UniRef:UniRef100_O05306,UniRef:UniRef50_O05306,UniRef:UniRef90_O05306;ec_number=3.2.2.n1
contig_1	Pyrodigal	gene	1354505	1356298	.	+	.	ID=GCA000153685_01281_gene;locus_tag=GCA000153685_01281;gene=fadD6
contig_1	Pyrodigal	CDS	1354505	1356298	.	+	0	ID=GCA000153685_01281;Name=long-chain-acyl-CoA synthetase FadD6;locus_tag=GCA000153685_01281;product=long-chain-acyl-CoA synthetase FadD6;Dbxref=GO:0001676,GO:0004467,GO:0005324,GO:0005524,GO:0005886,GO:0031956,GO:0044539;gene=fadD6;Parent=GCA000153685_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406240.1,SO:0001217,UniParc:UPI0000038E7E,UniRef:UniRef100_O05307,UniRef:UniRef50_O05307,UniRef:UniRef90_O05307;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	1356237	1356482	.	+	.	ID=GCA000153685_01282_gene;locus_tag=GCA000153685_01282
contig_1	Pyrodigal	CDS	1356237	1356482	.	+	0	ID=GCA000153685_01282;Name=hypothetical protein;locus_tag=GCA000153685_01282;product=hypothetical protein;Parent=GCA000153685_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E2EE1F,UniRef:UniRef100_A0A0E7ZSY0,UniRef:UniRef50_A0A0H3L862,UniRef:UniRef90_A0A0H3L862
contig_1	Pyrodigal	gene	1356496	1357320	.	+	.	ID=GCA000153685_01283_gene;locus_tag=GCA000153685_01283;gene=folP
contig_1	Pyrodigal	CDS	1356496	1357320	.	+	0	ID=GCA000153685_01283;Name=dihydropteroate synthase;locus_tag=GCA000153685_01283;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0005829,GO:0009396;gene=folP;Parent=GCA000153685_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00796,RefSeq:WP_003911441.1,SO:0001217,UniParc:UPI00005EE4EA,UniRef:UniRef100_P9WNC9,UniRef:UniRef50_P9WNC9,UniRef:UniRef90_P9WNC9;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	1357317	1358291	.	+	.	ID=GCA000153685_01284_gene;locus_tag=GCA000153685_01284;gene=gpgS
contig_1	Pyrodigal	CDS	1357317	1358291	.	+	0	ID=GCA000153685_01284;Name=glucosyl-3-phosphoglycerate synthase;locus_tag=GCA000153685_01284;product=glucosyl-3-phosphoglycerate synthase;Dbxref=GO:0000287,GO:0006011,GO:0016758,GO:0042803;gene=gpgS;Parent=GCA000153685_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13693,RefSeq:WP_003406242.1,SO:0001217,UniParc:UPI00000D107A,UniRef:UniRef100_P9WMW9,UniRef:UniRef50_P9WMW9,UniRef:UniRef90_P9WMW9;ec_number=2.4.1.266
contig_1	Pyrodigal	gene	1358330	1358698	.	+	.	ID=GCA000153685_01285_gene;locus_tag=GCA000153685_01285
contig_1	Pyrodigal	CDS	1358330	1358698	.	+	0	ID=GCA000153685_01285;Name=Cell division protein DivIVA;locus_tag=GCA000153685_01285;product=Cell division protein DivIVA;Parent=GCA000153685_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406243.1,SO:0001217,UniParc:UPI00000D11DF,UniRef:UniRef100_O05310,UniRef:UniRef50_A0A960CDG6,UniRef:UniRef90_R4LU43
contig_1	Pyrodigal	gene	1358695	1359309	.	+	.	ID=GCA000153685_01286_gene;locus_tag=GCA000153685_01286
contig_1	Pyrodigal	CDS	1358695	1359309	.	+	0	ID=GCA000153685_01286;Name=DNA-3-methyladenine glycosidase I;locus_tag=GCA000153685_01286;product=DNA-3-methyladenine glycosidase I;Parent=GCA000153685_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01246,RefSeq:WP_003406244.1,SO:0001217,UniParc:UPI00000D11C9,UniRef:UniRef100_A5U1Q8,UniRef:UniRef50_A0A7W9IJ17,UniRef:UniRef90_A5U1Q8;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	1359476	1359643	.	+	.	ID=GCA000153685_01287_gene;locus_tag=GCA000153685_01287
contig_1	Pyrodigal	CDS	1359476	1359643	.	+	0	ID=GCA000153685_01287;Name=Conserved protein;locus_tag=GCA000153685_01287;product=Conserved protein;Parent=GCA000153685_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406247.1,SO:0001217,UniParc:UPI00001B3068,UniRef:UniRef100_B2HS57,UniRef:UniRef50_O05312,UniRef:UniRef90_O05312
contig_1	Pyrodigal	gene	1359671	1360834	.	-	.	ID=GCA000153685_01288_gene;locus_tag=GCA000153685_01288;gene=glgM
contig_1	Pyrodigal	CDS	1359671	1360834	.	-	0	ID=GCA000153685_01288;Name=Alpha-maltose-1-phosphate synthase;locus_tag=GCA000153685_01288;product=Alpha-maltose-1-phosphate synthase;Dbxref=GO:0005978,GO:0009250,GO:0016757,GO:0045227;gene=glgM;Parent=GCA000153685_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16148,RefSeq:WP_003898773.1,SO:0001217,UniParc:UPI00000D5FC1,UniRef:UniRef100_P9WMZ1,UniRef:UniRef50_P9WMZ1,UniRef:UniRef90_P9WMZ1;ec_number=2.4.1.342
contig_1	Pyrodigal	gene	1361009	1362223	.	+	.	ID=GCA000153685_01289_gene;locus_tag=GCA000153685_01289;gene=glgC
contig_1	Pyrodigal	CDS	1361009	1362223	.	+	0	ID=GCA000153685_01289;Name=glucose-1-phosphate adenylyltransferase;locus_tag=GCA000153685_01289;product=glucose-1-phosphate adenylyltransferase;Dbxref=GO:0005524,GO:0005978,GO:0008878,GO:0045227;gene=glgC;Parent=GCA000153685_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0448,COG:G,KEGG:K00975,RefSeq:WP_003900294.1,SO:0001217,UniParc:UPI00012780D2,UniRef:UniRef100_UPI00012780D2,UniRef:UniRef50_P9WN43,UniRef:UniRef90_P9WN43;ec_number=2.7.7.27
contig_1	Pyrodigal	gene	1362466	1362798	.	-	.	ID=GCA000153685_01290_gene;locus_tag=GCA000153685_01290
contig_1	Pyrodigal	CDS	1362466	1362798	.	-	0	ID=GCA000153685_01290;Name=PE family protein PE14;locus_tag=GCA000153685_01290;product=PE family protein PE14;Parent=GCA000153685_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406250.1,SO:0001217,UniParc:UPI00000D5EE0,UniRef:UniRef100_L7N6A7,UniRef:UniRef50_A0A1R3XXP3,UniRef:UniRef90_L7N6A7
contig_1	Pyrodigal	gene	1362932	1364617	.	-	.	ID=GCA000153685_01291_gene;locus_tag=GCA000153685_01291
contig_1	Pyrodigal	CDS	1362932	1364617	.	-	0	ID=GCA000153685_01291;Name=Conserved protein;locus_tag=GCA000153685_01291;product=Conserved protein;Parent=GCA000153685_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06978,RefSeq:WP_003898774.1,SO:0001217,UniParc:UPI00000D5F0C,UniRef:UniRef100_O05316,UniRef:UniRef50_O05316,UniRef:UniRef90_O05316
contig_1	Pyrodigal	gene	1364645	1365319	.	-	.	ID=GCA000153685_01292_gene;locus_tag=GCA000153685_01292
contig_1	Pyrodigal	CDS	1364645	1365319	.	-	0	ID=GCA000153685_01292;Name=Isoprenylcysteine carboxylmethyltransferase family protein;locus_tag=GCA000153685_01292;product=Isoprenylcysteine carboxylmethyltransferase family protein;Parent=GCA000153685_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406252.1,SO:0001217,UniParc:UPI00000D1091,UniRef:UniRef100_A5U1R4,UniRef:UniRef50_A0A0N9YB34,UniRef:UniRef90_A0A8I0JWQ5
contig_1	Pyrodigal	gene	1365328	1366974	.	-	.	ID=GCA000153685_01293_gene;locus_tag=GCA000153685_01293
contig_1	Pyrodigal	CDS	1365328	1366974	.	-	0	ID=GCA000153685_01293;Name=multidrug efflux ABC transporter permease;locus_tag=GCA000153685_01293;product=multidrug efflux ABC transporter permease;Dbxref=GO:0005886,GO:0046677;Parent=GCA000153685_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898775,RefSeq:WP_003898775.1,SO:0001217,UniParc:UPI00000D0FBB,UniRef:UniRef100_O05318,UniRef:UniRef50_O05318,UniRef:UniRef90_O05318
contig_1	Pyrodigal	gene	1366971	1367906	.	-	.	ID=GCA000153685_01294_gene;locus_tag=GCA000153685_01294
contig_1	Pyrodigal	CDS	1366971	1367906	.	-	0	ID=GCA000153685_01294;Name=multidrug efflux ABC transporter ATP-binding protein;locus_tag=GCA000153685_01294;product=multidrug efflux ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0046677;Parent=GCA000153685_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003906541,RefSeq:WP_003900295.1,SO:0001217,UniParc:UPI00001A8FB0,UniRef:UniRef100_A0A0H3L8W0,UniRef:UniRef50_O86311,UniRef:UniRef90_O86311;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1367896	1368534	.	-	.	ID=GCA000153685_01295_gene;locus_tag=GCA000153685_01295;gene=raaS
contig_1	Pyrodigal	CDS	1367896	1368534	.	-	0	ID=GCA000153685_01295;Name=transcriptional regulator RaaS;locus_tag=GCA000153685_01295;product=transcriptional regulator RaaS;Dbxref=GO:0000976,GO:0003700,GO:0006355;gene=raaS;Parent=GCA000153685_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406254,RefSeq:WP_003406254.1,SO:0001217,UniParc:UPI00000D5F5F,UniRef:UniRef100_O86312,UniRef:UniRef50_O86312,UniRef:UniRef90_O86312
contig_1	Pyrodigal	gene	1368676	1369419	.	-	.	ID=GCA000153685_01296_gene;locus_tag=GCA000153685_01296
contig_1	Pyrodigal	CDS	1368676	1369419	.	-	0	ID=GCA000153685_01296;Name=Putative O-methyltransferase BCG_1280c;locus_tag=GCA000153685_01296;product=Putative O-methyltransferase BCG_1280c;Dbxref=GO:0008171,GO:0008757,GO:0032259;Parent=GCA000153685_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4EE,UniRef:UniRef100_P9WJZ7,UniRef:UniRef50_P9WJZ7,UniRef:UniRef90_P9WJZ7;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1369727	1370359	.	+	.	ID=GCA000153685_01297_gene;locus_tag=GCA000153685_01297;gene=sigE
contig_1	Pyrodigal	CDS	1369727	1370359	.	+	0	ID=GCA000153685_01297;Name=RNA polymerase sigma factor SigE;locus_tag=GCA000153685_01297;product=RNA polymerase sigma factor SigE;Dbxref=GO:0003677,GO:0003700,GO:0006352,GO:0006355,GO:0009408,GO:0009410,GO:0016987,GO:0042542,GO:0051701,GO:0052572;gene=sigE;Parent=GCA000153685_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4EF,UniRef:UniRef100_P9WGG7,UniRef:UniRef50_P9WGG7,UniRef:UniRef90_P9WGG7
contig_1	Pyrodigal	gene	1370517	1370981	.	+	.	ID=GCA000153685_01298_gene;locus_tag=GCA000153685_01298;gene=rseA
contig_1	Pyrodigal	CDS	1370517	1370981	.	+	0	ID=GCA000153685_01298;Name=anti-sigma E factor RseA;locus_tag=GCA000153685_01298;product=anti-sigma E factor RseA;Dbxref=GO:0005737,GO:0006355,GO:0016989,GO:0043856,GO:0046872;gene=rseA;Parent=GCA000153685_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406258,BlastRules:WP_003896479,RefSeq:WP_003406258.1,SO:0001217,UniParc:UPI000004B720,UniRef:UniRef100_L0T905,UniRef:UniRef50_L0T905,UniRef:UniRef90_L0T905
contig_1	Pyrodigal	gene	1371061	1372635	.	+	.	ID=GCA000153685_01299_gene;locus_tag=GCA000153685_01299;gene=htrA
contig_1	Pyrodigal	CDS	1371061	1372635	.	+	0	ID=GCA000153685_01299;Name=serine protease HtrA;locus_tag=GCA000153685_01299;product=serine protease HtrA;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0009274;gene=htrA;Parent=GCA000153685_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_002853235,BlastRules:WP_003912936,BlastRules:WP_009872209,BlastRules:WP_009967069,SO:0001217,UniParc:UPI00005EE4F1,UniRef:UniRef100_A0A0H3LC29,UniRef:UniRef50_O06291,UniRef:UniRef90_O06291;ec_number=3.4.21.107
contig_1	Pyrodigal	gene	1372637	1373032	.	+	.	ID=GCA000153685_01300_gene;locus_tag=GCA000153685_01300;gene=tatB
contig_1	Pyrodigal	CDS	1372637	1373032	.	+	0	ID=GCA000153685_01300;Name=Sec-independent protein translocase protein TatB;locus_tag=GCA000153685_01300;product=Sec-independent protein translocase protein TatB;Dbxref=GO:0008320,GO:0015628,GO:0016020,GO:0033281,GO:0043953;gene=tatB;Parent=GCA000153685_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03117,RefSeq:WP_003898780.1,SO:0001217,UniParc:UPI0000136907,UniRef:UniRef100_P9WG99,UniRef:UniRef50_P9WG99,UniRef:UniRef90_P9WG99
contig_1	Pyrodigal	gene	1373065	1373895	.	-	.	ID=GCA000153685_01301_gene;locus_tag=GCA000153685_01301
contig_1	Pyrodigal	CDS	1373065	1373895	.	-	0	ID=GCA000153685_01301;Name=Haloacid dehalogenase-like hydrolase domain-containing protein 2;locus_tag=GCA000153685_01301;product=Haloacid dehalogenase-like hydrolase domain-containing protein 2;Parent=GCA000153685_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406261.1,SO:0001217,UniParc:UPI00000D5F32,UniRef:UniRef100_O33221,UniRef:UniRef50_A0A654TPY6,UniRef:UniRef90_A0A654TPY6
contig_1	Pyrodigal	gene	1374006	1375469	.	-	.	ID=GCA000153685_01302_gene;locus_tag=GCA000153685_01302
contig_1	Pyrodigal	CDS	1374006	1375469	.	-	0	ID=GCA000153685_01302;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000153685_01302;product=YdbS-like PH domain-containing protein;Parent=GCA000153685_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08981,RefSeq:WP_021036377.1,SO:0001217,UniParc:UPI0003AB4A96,UniRef:UniRef100_UPI0003AB4A96,UniRef:UniRef50_A0A178LPY1,UniRef:UniRef90_A0AAX1PXU1
contig_1	Pyrodigal	gene	1375466	1375900	.	-	.	ID=GCA000153685_01303_gene;locus_tag=GCA000153685_01303
contig_1	Pyrodigal	CDS	1375466	1375900	.	-	0	ID=GCA000153685_01303;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000153685_01303;product=YdbS-like PH domain-containing protein;Parent=GCA000153685_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE4F2,UniRef:UniRef100_A5U1S5,UniRef:UniRef50_A0A386ZPX6,UniRef:UniRef90_A0A0H3L879
contig_1	Pyrodigal	gene	1376094	1376651	.	+	.	ID=GCA000153685_01304_gene;locus_tag=GCA000153685_01304
contig_1	Pyrodigal	CDS	1376094	1376651	.	+	0	ID=GCA000153685_01304;Name=Lipoprotein LPQX;locus_tag=GCA000153685_01304;product=Lipoprotein LPQX;Parent=GCA000153685_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406266.1,SO:0001217,UniParc:UPI00000D1113,UniRef:UniRef100_A5U1S6,UniRef:UniRef50_A0A8I0EM14,UniRef:UniRef90_A0A8I0EM14
contig_1	Pyrodigal	gene	1376951	1378096	.	-	.	ID=GCA000153685_01305_gene;locus_tag=GCA000153685_01305;gene=mrp
contig_1	Pyrodigal	CDS	1376951	1378096	.	-	0	ID=GCA000153685_01305;Name=Iron-sulfur cluster carrier protein;locus_tag=GCA000153685_01305;product=Iron-sulfur cluster carrier protein;Dbxref=GO:0005524,GO:0016226,GO:0016887,GO:0046872,GO:0051539,GO:0140663;gene=mrp;Parent=GCA000153685_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000012F585,UniRef:UniRef100_P9WJN7,UniRef:UniRef50_P9WJN7,UniRef:UniRef90_P9WJN7
contig_1	Pyrodigal	gene	1378136	1379371	.	-	.	ID=GCA000153685_01306_gene;locus_tag=GCA000153685_01306
contig_1	Pyrodigal	CDS	1378136	1379371	.	-	0	ID=GCA000153685_01306;Name=putative membrane protein;locus_tag=GCA000153685_01306;product=putative membrane protein;Parent=GCA000153685_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406276.1,SO:0001217,UniParc:UPI0000164FFF,UniRef:UniRef100_Q7D8K4,UniRef:UniRef50_O86313,UniRef:UniRef90_O86313
contig_1	Pyrodigal	gene	1379496	1380038	.	-	.	ID=GCA000153685_01307_gene;locus_tag=GCA000153685_01307
contig_1	Pyrodigal	CDS	1379496	1380038	.	-	0	ID=GCA000153685_01307;Name=DUF1003 domain-containing protein;locus_tag=GCA000153685_01307;product=DUF1003 domain-containing protein;Parent=GCA000153685_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406283.1,SO:0001217,UniParc:UPI00000D10E8,UniRef:UniRef100_A5U1S9,UniRef:UniRef50_Q8FQD6,UniRef:UniRef90_R4LWT3
contig_1	Pyrodigal	gene	1380035	1381342	.	-	.	ID=GCA000153685_01308_gene;locus_tag=GCA000153685_01308
contig_1	Pyrodigal	CDS	1380035	1381342	.	-	0	ID=GCA000153685_01308;Name=CBS domain-containing protein;locus_tag=GCA000153685_01308;product=CBS domain-containing protein;Parent=GCA000153685_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406286.1,SO:0001217,UniParc:UPI0000165000,UniRef:UniRef100_A0A1R3XY33,UniRef:UniRef50_F3Z971,UniRef:UniRef90_A0A9P2M3H2
contig_1	Pyrodigal	gene	1381404	1381700	.	-	.	ID=GCA000153685_01309_gene;locus_tag=GCA000153685_01309
contig_1	Pyrodigal	CDS	1381404	1381700	.	-	0	ID=GCA000153685_01309;Name=DUF4190 domain-containing protein;locus_tag=GCA000153685_01309;product=DUF4190 domain-containing protein;Parent=GCA000153685_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F61CA,UniRef:UniRef100_Q7D8K1,UniRef:UniRef50_H8IHS2,UniRef:UniRef90_Q7D8K1
contig_1	Pyrodigal	gene	1382150	1382677	.	+	.	ID=GCA000153685_01310_gene;locus_tag=GCA000153685_01310
contig_1	Pyrodigal	CDS	1382150	1382677	.	+	0	ID=GCA000153685_01310;Name=General stress protein 17M-like domain-containing protein;locus_tag=GCA000153685_01310;product=General stress protein 17M-like domain-containing protein;Parent=GCA000153685_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406290.1,SO:0001217,UniParc:UPI00000D10C3,UniRef:UniRef100_A5U1T2,UniRef:UniRef50_A0A0H3CY86,UniRef:UniRef90_A0A1A2GLQ7
contig_1	Pyrodigal	gene	1382704	1384104	.	+	.	ID=GCA000153685_01311_gene;locus_tag=GCA000153685_01311;gene=lpqY
contig_1	Pyrodigal	CDS	1382704	1384104	.	+	0	ID=GCA000153685_01311;Name=trehalose ABC transporter substrate-binding protein LpqY;locus_tag=GCA000153685_01311;product=trehalose ABC transporter substrate-binding protein LpqY;Dbxref=GO:0005886,GO:0015574,GO:0015771,GO:0042597,GO:0043190,GO:0051701;gene=lpqY;Parent=GCA000153685_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898783,SO:0001217,UniParc:UPI00005EE4F8,UniRef:UniRef100_P9WGU9,UniRef:UniRef50_G7CES0,UniRef:UniRef90_P9WGU9
contig_1	Pyrodigal	gene	1384101	1385024	.	+	.	ID=GCA000153685_01312_gene;locus_tag=GCA000153685_01312;gene=sugA
contig_1	Pyrodigal	CDS	1384101	1385024	.	+	0	ID=GCA000153685_01312;Name=trehalose ABC transporter permease SugA;locus_tag=GCA000153685_01312;product=trehalose ABC transporter permease SugA;Dbxref=GO:0005886,GO:0051701,GO:0055085;gene=sugA;Parent=GCA000153685_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406295,KEGG:K10237,RefSeq:WP_003406295.1,SO:0001217,UniParc:UPI00000D5F56,UniRef:UniRef100_P9WG03,UniRef:UniRef50_P9WG03,UniRef:UniRef90_P9WG03
contig_1	Pyrodigal	gene	1385014	1385853	.	+	.	ID=GCA000153685_01313_gene;locus_tag=GCA000153685_01313;gene=sugB
contig_1	Pyrodigal	CDS	1385014	1385853	.	+	0	ID=GCA000153685_01313;Name=trehalose ABC transporter permease SugB;locus_tag=GCA000153685_01313;product=trehalose ABC transporter permease SugB;gene=sugB;Parent=GCA000153685_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900298,SO:0001217,UniParc:UPI00005EE4F9,UniRef:UniRef100_A0A0E8UBP9,UniRef:UniRef50_A0A0E8UBP9,UniRef:UniRef90_A0A0E8UBP9
contig_1	Pyrodigal	gene	1385858	1387039	.	+	.	ID=GCA000153685_01314_gene;locus_tag=GCA000153685_01314;gene=sugC
contig_1	Pyrodigal	CDS	1385858	1387039	.	+	0	ID=GCA000153685_01314;Name=trehalose ABC transporter ATP-binding protein SugC;locus_tag=GCA000153685_01314;product=trehalose ABC transporter ATP-binding protein SugC;Dbxref=GO:0005524,GO:0005886,GO:0015574,GO:0015771,GO:0016887,GO:0035796,GO:0042802,GO:0042803,GO:0043211,GO:0051701,GO:0055052;gene=sugC;Parent=GCA000153685_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406299,RefSeq:WP_003406299.1,SO:0001217,UniParc:UPI00000D5E10,UniRef:UniRef100_P9WQI3,UniRef:UniRef50_P9WQI3,UniRef:UniRef90_P9WQI3;ec_number=7.5.2.-
contig_1	Pyrodigal	gene	1387116	1388216	.	-	.	ID=GCA000153685_01315_gene;locus_tag=GCA000153685_01315;gene=corA
contig_1	Pyrodigal	CDS	1387116	1388216	.	-	0	ID=GCA000153685_01315;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000153685_01315;product=magnesium/cobalt transporter CorA;Dbxref=GO:0006824,GO:0015087,GO:0015095,GO:0015693,GO:0016020;gene=corA;Parent=GCA000153685_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406300.1,SO:0001217,UniParc:UPI0000165001,UniRef:UniRef100_A0A0H3LES3,UniRef:UniRef50_O50455,UniRef:UniRef90_O50455
contig_1	Pyrodigal	gene	1388387	1389376	.	+	.	ID=GCA000153685_01316_gene;locus_tag=GCA000153685_01316;gene=mdh
contig_1	Pyrodigal	CDS	1388387	1389376	.	+	0	ID=GCA000153685_01316;Name=malate dehydrogenase;locus_tag=GCA000153685_01316;product=malate dehydrogenase;Dbxref=GO:0006099,GO:0006108,GO:0016615,GO:0030060;gene=mdh;Parent=GCA000153685_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_003406301.1,SO:0001217,UniParc:UPI000012EE45,UniRef:UniRef100_P9WK13,UniRef:UniRef50_P9WK13,UniRef:UniRef90_P9WK13;ec_number=1.1.1.37
contig_1	Pyrodigal	gene	1389443	1389712	.	+	.	ID=GCA000153685_01317_gene;locus_tag=GCA000153685_01317;gene=vapB33
contig_1	Pyrodigal	CDS	1389443	1389712	.	+	0	ID=GCA000153685_01317;Name=type II toxin-antitoxin system antitoxin VapB33;locus_tag=GCA000153685_01317;product=type II toxin-antitoxin system antitoxin VapB33;Dbxref=GO:0045927;gene=vapB33;Parent=GCA000153685_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406302,SO:0001217,UniParc:UPI000252D20B,UniRef:UniRef100_O50456,UniRef:UniRef50_O50456,UniRef:UniRef90_O50456
contig_1	Pyrodigal	gene	1389709	1390140	.	+	.	ID=GCA000153685_01318_gene;locus_tag=GCA000153685_01318;gene=vapC33
contig_1	Pyrodigal	CDS	1389709	1390140	.	+	0	ID=GCA000153685_01318;Name=Ribonuclease VapC33;locus_tag=GCA000153685_01318;product=Ribonuclease VapC33;Dbxref=GO:0000287,GO:0004540,GO:0005886,GO:0045926;gene=vapC33;Parent=GCA000153685_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406304.1,SO:0001217,UniParc:UPI00000D10E0,UniRef:UniRef100_P9WF69,UniRef:UniRef50_P9WF69,UniRef:UniRef90_P9WF69;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1390163	1391851	.	-	.	ID=GCA000153685_01319_gene;locus_tag=GCA000153685_01319
contig_1	Pyrodigal	CDS	1390163	1391851	.	-	0	ID=GCA000153685_01319;Name=PE-PGRS family protein PE_PGRS23;locus_tag=GCA000153685_01319;product=PE-PGRS family protein PE_PGRS23;Parent=GCA000153685_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003910308.1,SO:0001217,UniParc:UPI0000165283,UniRef:UniRef100_Q79FQ7,UniRef:UniRef50_Q79FQ7,UniRef:UniRef90_Q79FQ7
contig_1	Pyrodigal	gene	1391956	1392891	.	+	.	ID=GCA000153685_01320_gene;locus_tag=GCA000153685_01320
contig_1	Pyrodigal	CDS	1391956	1392891	.	+	0	ID=GCA000153685_01320;Name=ABC-type glycine betaine transport system substrate-binding domain-containing protein;locus_tag=GCA000153685_01320;product=ABC-type glycine betaine transport system substrate-binding domain-containing protein;Parent=GCA000153685_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E6276E,UniRef:UniRef100_A0A0E8NVD2,UniRef:UniRef50_A0A4Z0N5J1,UniRef:UniRef90_A0A8I0ENB3
contig_1	Pyrodigal	gene	1392972	1393802	.	-	.	ID=GCA000153685_01321_gene;locus_tag=GCA000153685_01321
contig_1	Pyrodigal	CDS	1392972	1393802	.	-	0	ID=GCA000153685_01321;Name=Short-chain type dehydrogenase/reductase;locus_tag=GCA000153685_01321;product=Short-chain type dehydrogenase/reductase;Parent=GCA000153685_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898788.1,SO:0001217,UniParc:UPI00000D5F69,UniRef:UniRef100_A5U1U3,UniRef:UniRef50_A0A6N7C2T9,UniRef:UniRef90_A5U1U3
contig_1	Pyrodigal	gene	1393859	1394152	.	-	.	ID=GCA000153685_01322_gene;locus_tag=GCA000153685_01322;gene=relE
contig_1	Pyrodigal	CDS	1393859	1394152	.	-	0	ID=GCA000153685_01322;Name=type II toxin-antitoxin system mRNA interferase RelE;locus_tag=GCA000153685_01322;product=type II toxin-antitoxin system mRNA interferase RelE;Dbxref=GO:0003677,GO:0004519,GO:0006401,GO:0045926;gene=relE;Parent=GCA000153685_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000323025,BlastRules:WP_003898789,RefSeq:WP_003898789.1,SO:0001217,UniParc:UPI00000C152D,UniRef:UniRef100_O50461,UniRef:UniRef50_O50461,UniRef:UniRef90_O50461;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	1394149	1394418	.	-	.	ID=GCA000153685_01323_gene;locus_tag=GCA000153685_01323;gene=relB
contig_1	Pyrodigal	CDS	1394149	1394418	.	-	0	ID=GCA000153685_01323;Name=Antitoxin RelB;locus_tag=GCA000153685_01323;product=Antitoxin RelB;Dbxref=GO:0003677,GO:0045927,GO:0097351;gene=relB;Parent=GCA000153685_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19159,RefSeq:WP_003406322.1,SO:0001217,UniParc:UPI00000C152E,UniRef:UniRef100_O50462,UniRef:UniRef50_O50462,UniRef:UniRef90_O50462
contig_1	Pyrodigal	gene	1394531	1398226	.	-	.	ID=GCA000153685_01324_gene;locus_tag=GCA000153685_01324;gene=kgd
contig_1	Pyrodigal	CDS	1394531	1398226	.	-	0	ID=GCA000153685_01324;Name=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;locus_tag=GCA000153685_01324;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;Dbxref=GO:0000287,GO:0004149,GO:0004591,GO:0005829,GO:0005886,GO:0006099,GO:0006103,GO:0006105,GO:0008683,GO:0009274,GO:0016491,GO:0016624,GO:0016746,GO:0030976,GO:0045252,GO:0045254,GO:0050439;gene=kgd;Parent=GCA000153685_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01616,RefSeq:WP_003898790.1,SO:0001217,UniParc:UPI00000D4F79,UniRef:UniRef100_P9WIS5,UniRef:UniRef50_P9WIS5,UniRef:UniRef90_P9WIS5;ec_number=4.1.1.71
contig_1	Pyrodigal	gene	1398368	1399156	.	-	.	ID=GCA000153685_01325_gene;locus_tag=GCA000153685_01325
contig_1	Pyrodigal	CDS	1398368	1399156	.	-	0	ID=GCA000153685_01325;Name=putative membrane protein;locus_tag=GCA000153685_01325;product=putative membrane protein;Parent=GCA000153685_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07160,RefSeq:WP_003900303.1,SO:0001217,UniParc:UPI0001278139,UniRef:UniRef100_A0A0H3LES9,UniRef:UniRef50_A0A051TQC0,UniRef:UniRef90_O50464;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1399353	1401092	.	+	.	ID=GCA000153685_01326_gene;locus_tag=GCA000153685_01326
contig_1	Pyrodigal	CDS	1399353	1401092	.	+	0	ID=GCA000153685_01326;Name=putative MFS-type transporter Rv1250;locus_tag=GCA000153685_01326;product=putative MFS-type transporter Rv1250;Dbxref=GO:0005886,GO:0016020,GO:0022857;Parent=GCA000153685_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898791.1,SO:0001217,UniParc:UPI00000D5F8C,UniRef:UniRef100_P9WG87,UniRef:UniRef50_P9WG87,UniRef:UniRef90_P9WG87
contig_1	Pyrodigal	gene	1400995	1404414	.	-	.	ID=GCA000153685_01327_gene;locus_tag=GCA000153685_01327
contig_1	Pyrodigal	CDS	1400995	1404414	.	-	0	ID=GCA000153685_01327;Name=TM0106 family RecB-like nuclease;locus_tag=GCA000153685_01327;product=TM0106 family RecB-like nuclease;Parent=GCA000153685_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900304.1,SO:0001217,UniParc:UPI000127813A,UniRef:UniRef100_UPI000127813A,UniRef:UniRef50_A0A4R8RCB2,UniRef:UniRef90_O50466
contig_1	Pyrodigal	gene	1404470	1405078	.	-	.	ID=GCA000153685_01328_gene;locus_tag=GCA000153685_01328;gene=lprE
contig_1	Pyrodigal	CDS	1404470	1405078	.	-	0	ID=GCA000153685_01328;Name=Putative lipoprotein LprE;locus_tag=GCA000153685_01328;product=Putative lipoprotein LprE;Dbxref=GO:0005576,GO:0005886;gene=lprE;Parent=GCA000153685_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406334.1,SO:0001217,UniParc:UPI000012E883,UniRef:UniRef100_P9WK49,UniRef:UniRef50_P9WK49,UniRef:UniRef90_P9WK49
contig_1	Pyrodigal	gene	1405144	1406835	.	+	.	ID=GCA000153685_01329_gene;locus_tag=GCA000153685_01329;gene=deaD
contig_1	Pyrodigal	CDS	1405144	1406835	.	+	0	ID=GCA000153685_01329;Name=ATP-dependent RNA helicase DeaD;locus_tag=GCA000153685_01329;product=ATP-dependent RNA helicase DeaD;Dbxref=GO:0000027,GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0009274,GO:0009409,GO:0016887,GO:0033592,GO:0061775,GO:0070417,GO:0140584,GO:0140665,GO:0140849;gene=deaD;Parent=GCA000153685_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898793.1,SO:0001217,UniParc:UPI00001290E5,UniRef:UniRef100_P9WH05,UniRef:UniRef50_P9WH05,UniRef:UniRef90_P9WH05;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1406832	1407983	.	+	.	ID=GCA000153685_01330_gene;locus_tag=GCA000153685_01330
contig_1	Pyrodigal	CDS	1406832	1407983	.	+	0	ID=GCA000153685_01330;Name=Acyltransferase;locus_tag=GCA000153685_01330;product=Acyltransferase;Parent=GCA000153685_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27307,RefSeq:WP_003406347.1,SO:0001217,UniParc:UPI00000D11FB,UniRef:UniRef100_A5U1V2,UniRef:UniRef50_A0A654TM15,UniRef:UniRef90_A0A654TM15;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1407952	1408560	.	-	.	ID=GCA000153685_01331_gene;locus_tag=GCA000153685_01331
contig_1	Pyrodigal	CDS	1407952	1408560	.	-	0	ID=GCA000153685_01331;Name=putative HTH-type transcriptional regulator Rv1255c;locus_tag=GCA000153685_01331;product=putative HTH-type transcriptional regulator Rv1255c;Dbxref=GO:0000976,GO:0003700,GO:0006355;Parent=GCA000153685_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406350.1,SO:0001217,UniParc:UPI000013A4F9,UniRef:UniRef100_P9WMD5,UniRef:UniRef50_P9WMD5,UniRef:UniRef90_P9WMD5
contig_1	Pyrodigal	gene	1408560	1409765	.	-	.	ID=GCA000153685_01332_gene;locus_tag=GCA000153685_01332;gene=cyp130
contig_1	Pyrodigal	CDS	1408560	1409765	.	-	0	ID=GCA000153685_01332;Name=cytochrome P450 Cyp130;locus_tag=GCA000153685_01332;product=cytochrome P450 Cyp130;Dbxref=GO:0004497,GO:0005506,GO:0009274,GO:0016705,GO:0020037;gene=cyp130;Parent=GCA000153685_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406352,KEGG:K21119,SO:0001217,UniParc:UPI00005F61D4,UniRef:UniRef100_P9WPN5,UniRef:UniRef50_P9WPN5,UniRef:UniRef90_P9WPN5;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	1409891	1411258	.	-	.	ID=GCA000153685_01333_gene;locus_tag=GCA000153685_01333
contig_1	Pyrodigal	CDS	1409891	1411258	.	-	0	ID=GCA000153685_01333;Name=Oxidoreductase;locus_tag=GCA000153685_01333;product=Oxidoreductase;Parent=GCA000153685_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00104,RefSeq:WP_003406358.1,SO:0001217,UniParc:UPI00000D1221,UniRef:UniRef100_A5U1V5,UniRef:UniRef50_A0AA97GWE0,UniRef:UniRef90_A0A0U0QKI8;ec_number=1.1.99.14
contig_1	Pyrodigal	gene	1411255	1412514	.	-	.	ID=GCA000153685_01334_gene;locus_tag=GCA000153685_01334;gene=tap
contig_1	Pyrodigal	CDS	1411255	1412514	.	-	0	ID=GCA000153685_01334;Name=Multidrug efflux pump Tap;locus_tag=GCA000153685_01334;product=Multidrug efflux pump Tap;Dbxref=GO:0005886,GO:0015562,GO:0046677;gene=tap;Parent=GCA000153685_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406359.1,SO:0001217,UniParc:UPI000013A501,UniRef:UniRef100_P9WJX9,UniRef:UniRef50_P9WJX9,UniRef:UniRef90_P9WJX9
contig_1	Pyrodigal	gene	1412600	1413412	.	+	.	ID=GCA000153685_01335_gene;locus_tag=GCA000153685_01335
contig_1	Pyrodigal	CDS	1412600	1413412	.	+	0	ID=GCA000153685_01335;Name=Type-5 uracil-DNA glycosylase;locus_tag=GCA000153685_01335;product=Type-5 uracil-DNA glycosylase;Parent=GCA000153685_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002ED48C5,UniRef:UniRef100_A0A0E8TVM8,UniRef:UniRef50_P9WM53,UniRef:UniRef90_A0A0E8TVM8
contig_1	Pyrodigal	gene	1413414	1414532	.	+	.	ID=GCA000153685_01336_gene;locus_tag=GCA000153685_01336
contig_1	Pyrodigal	CDS	1413414	1414532	.	+	0	ID=GCA000153685_01336;Name=FAD-binding protein;locus_tag=GCA000153685_01336;product=FAD-binding protein;Dbxref=GO:0071949;Parent=GCA000153685_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406361.1,SO:0001217,UniParc:UPI000013A509,UniRef:UniRef100_P9WM51,UniRef:UniRef50_P9WM51,UniRef:UniRef90_P9WM51
contig_1	Pyrodigal	gene	1414658	1415131	.	-	.	ID=GCA000153685_01337_gene;locus_tag=GCA000153685_01337
contig_1	Pyrodigal	CDS	1414658	1415131	.	-	0	ID=GCA000153685_01337;Name=F420H(2)-dependent quinone reductase;locus_tag=GCA000153685_01337;product=F420H(2)-dependent quinone reductase;Dbxref=GO:0005886,GO:0016491,GO:0070967;Parent=GCA000153685_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406364,BlastRules:WP_003407780,KEGG:K00540,SO:0001217,UniParc:UPI00005EE502,UniRef:UniRef100_P9WP13,UniRef:UniRef50_P9WP13,UniRef:UniRef90_P9WP13;ec_number=1.1.98.-
contig_1	Pyrodigal	gene	1415112	1415546	.	-	.	ID=GCA000153685_01338_gene;locus_tag=GCA000153685_01338
contig_1	Pyrodigal	CDS	1415112	1415546	.	-	0	ID=GCA000153685_01338;Name=putative HIT-like protein Rv1262c;locus_tag=GCA000153685_01338;product=putative HIT-like protein Rv1262c;Dbxref=GO:0003824,GO:0009117;Parent=GCA000153685_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898798.1,SO:0001217,UniParc:UPI000013B263,UniRef:UniRef100_P9WML1,UniRef:UniRef50_P9WML1,UniRef:UniRef90_P9WML1
contig_1	Pyrodigal	gene	1415605	1416993	.	+	.	ID=GCA000153685_01339_gene;locus_tag=GCA000153685_01339;gene=amiB2
contig_1	Pyrodigal	CDS	1415605	1416993	.	+	0	ID=GCA000153685_01339;Name=amidase;locus_tag=GCA000153685_01339;product=amidase;Dbxref=GO:0004040;gene=amiB2;Parent=GCA000153685_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406369.1,SO:0001217,UniParc:UPI0000125973,UniRef:UniRef100_P9WQ97,UniRef:UniRef50_P9WQ97,UniRef:UniRef90_P9WQ97;ec_number=3.5.1.4
contig_1	Pyrodigal	gene	1417068	1418261	.	+	.	ID=GCA000153685_01340_gene;locus_tag=GCA000153685_01340
contig_1	Pyrodigal	CDS	1417068	1418261	.	+	0	ID=GCA000153685_01340;Name=adenylate cyclase;locus_tag=GCA000153685_01340;product=adenylate cyclase;Dbxref=GO:0004016,GO:0005524,GO:0006171,GO:0008289,GO:0009268,GO:0010855,GO:0030145,GO:0035556,GO:0042803;Parent=GCA000153685_01340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406372,RefSeq:WP_003406372.1,SO:0001217,UniParc:UPI000013A514,UniRef:UniRef100_P9WMU9,UniRef:UniRef50_P9WMU9,UniRef:UniRef90_P9WMU9;ec_number=4.6.1.1
contig_1	Infernal	gene	1418276	1418384	.	-	.	ID=GCA000153685_01341_gene;locus_tag=GCA000153685_01341;gene=ncrMT1302
contig_1	Infernal	ncRNA	1418276	1418384	1.8e-18	-	.	ID=GCA000153685_01341;Name=Mycobacterium sRNA ncrMT1302;locus_tag=GCA000153685_01341;product=Mycobacterium sRNA ncrMT1302;Dbxref=RFAM:RF02341;Parent=GCA000153685_01341_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02341
contig_1	Pyrodigal	gene	1418560	1419114	.	+	.	ID=GCA000153685_01342_gene;locus_tag=GCA000153685_01342
contig_1	Pyrodigal	CDS	1418560	1419114	.	+	0	ID=GCA000153685_01342;Name=putative protein Mb1296;locus_tag=GCA000153685_01342;product=putative protein Mb1296;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911468.1,SO:0001217,UniParc:UPI00005EE504,UniRef:UniRef100_P9WM49,UniRef:UniRef50_P9WM49,UniRef:UniRef90_P9WM49
contig_1	Pyrodigal	gene	1419134	1421014	.	-	.	ID=GCA000153685_01343_gene;locus_tag=GCA000153685_01343;gene=pknH
contig_1	Pyrodigal	CDS	1419134	1421014	.	-	0	ID=GCA000153685_01343;Name=serine/threonine protein kinase PknH;locus_tag=GCA000153685_01343;product=serine/threonine protein kinase PknH;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006355,GO:0009274,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045893,GO:0045926,GO:0052572,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1903338,GO:1990244;gene=pknH;Parent=GCA000153685_01343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886110,RefSeq:WP_003898799.1,SO:0001217,UniParc:UPI0000165004,UniRef:UniRef100_P9WI70,UniRef:UniRef50_P9WI71,UniRef:UniRef90_P9WI71;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1421355	1422521	.	-	.	ID=GCA000153685_01344_gene;locus_tag=GCA000153685_01344;gene=embR
contig_1	Pyrodigal	CDS	1421355	1422521	.	-	0	ID=GCA000153685_01344;Name=ATPase/transcriptional regulator EmbR;locus_tag=GCA000153685_01344;product=ATPase/transcriptional regulator EmbR;Dbxref=GO:0000160,GO:0003677,GO:0003924,GO:0005886,GO:0006355,GO:0009274,GO:0016887;gene=embR;Parent=GCA000153685_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406553,RefSeq:WP_003406553.1,SO:0001217,UniParc:UPI000013A51C,UniRef:UniRef100_P9WGJ9,UniRef:UniRef50_P9WGJ9,UniRef:UniRef90_P9WGJ9
contig_1	Pyrodigal	gene	1422832	1423530	.	-	.	ID=GCA000153685_01345_gene;locus_tag=GCA000153685_01345
contig_1	Pyrodigal	CDS	1422832	1423530	.	-	0	ID=GCA000153685_01345;Name=putative protein Rv1268c;locus_tag=GCA000153685_01345;product=putative protein Rv1268c;Parent=GCA000153685_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898800.1,SO:0001217,UniParc:UPI000013A520,UniRef:UniRef100_P9WM47,UniRef:UniRef50_P9WM47,UniRef:UniRef90_P9WM47
contig_1	Pyrodigal	gene	1423753	1424127	.	-	.	ID=GCA000153685_01346_gene;locus_tag=GCA000153685_01346
contig_1	Pyrodigal	CDS	1423753	1424127	.	-	0	ID=GCA000153685_01346;Name=Protein Mb1300c;locus_tag=GCA000153685_01346;product=Protein Mb1300c;Dbxref=GO:0005576,GO:0009274;Parent=GCA000153685_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406558.1,SO:0001217,UniParc:UPI000013A526,UniRef:UniRef100_P9WM45,UniRef:UniRef50_P9WM45,UniRef:UniRef90_P9WM45
contig_1	Pyrodigal	gene	1424188	1424922	.	-	.	ID=GCA000153685_01347_gene;locus_tag=GCA000153685_01347;gene=lprA
contig_1	Pyrodigal	CDS	1424188	1424922	.	-	0	ID=GCA000153685_01347;Name=TLR2 agonist LprA;locus_tag=GCA000153685_01347;product=TLR2 agonist LprA;Dbxref=GO:0005576,GO:0005886,GO:0008289,GO:0009274,GO:0048018;gene=lprA;Parent=GCA000153685_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406562,RefSeq:WP_021036378.1,SO:0001217,UniParc:UPI000169A341,UniRef:UniRef100_UPI000169A341,UniRef:UniRef50_P9WK55,UniRef:UniRef90_P9WK55
contig_1	Pyrodigal	gene	1425135	1425476	.	-	.	ID=GCA000153685_01348_gene;locus_tag=GCA000153685_01348
contig_1	Pyrodigal	CDS	1425135	1425476	.	-	0	ID=GCA000153685_01348;Name=putative protein Mb1302c;locus_tag=GCA000153685_01348;product=putative protein Mb1302c;Parent=GCA000153685_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406566.1,SO:0001217,UniParc:UPI000013A52C,UniRef:UniRef100_P9WM43,UniRef:UniRef50_P9WM43,UniRef:UniRef90_P9WM43
contig_1	Pyrodigal	gene	1425584	1427428	.	-	.	ID=GCA000153685_01349_gene;locus_tag=GCA000153685_01349
contig_1	Pyrodigal	CDS	1425584	1427428	.	-	0	ID=GCA000153685_01349;Name=fatty acid ABC transporter ATP-binding protein/permease;locus_tag=GCA000153685_01349;product=fatty acid ABC transporter ATP-binding protein/permease;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0042626,GO:0055085,GO:0140359;Parent=GCA000153685_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406569,RefSeq:WP_003915915.1,SO:0001217,UniParc:UPI00005EE507,UniRef:UniRef100_P9WQJ3,UniRef:UniRef50_P9WQJ3,UniRef:UniRef90_P9WQJ3;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1427476	1429224	.	-	.	ID=GCA000153685_01350_gene;locus_tag=GCA000153685_01350
contig_1	Pyrodigal	CDS	1427476	1429224	.	-	0	ID=GCA000153685_01350;Name=putative ABC transporter ATP-binding protein Mb1304c;locus_tag=GCA000153685_01350;product=putative ABC transporter ATP-binding protein Mb1304c;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016887;Parent=GCA000153685_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406574.1,SO:0001217,UniParc:UPI000013A535,UniRef:UniRef100_P9WQJ1,UniRef:UniRef50_P9WQJ1,UniRef:UniRef90_P9WQJ1
contig_1	Pyrodigal	gene	1429371	1429928	.	+	.	ID=GCA000153685_01351_gene;locus_tag=GCA000153685_01351;gene=lprB
contig_1	Pyrodigal	CDS	1429371	1429928	.	+	0	ID=GCA000153685_01351;Name=Putative lipoprotein LprB;locus_tag=GCA000153685_01351;product=Putative lipoprotein LprB;Dbxref=GO:0005886;gene=lprB;Parent=GCA000153685_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901123.1,SO:0001217,UniParc:UPI000012E880,UniRef:UniRef100_P9WK53,UniRef:UniRef50_P9WK53,UniRef:UniRef90_P9WK53
contig_1	Pyrodigal	gene	1429925	1430467	.	+	.	ID=GCA000153685_01352_gene;locus_tag=GCA000153685_01352;gene=lprC
contig_1	Pyrodigal	CDS	1429925	1430467	.	+	0	ID=GCA000153685_01352;Name=putative lipoprotein LprC;locus_tag=GCA000153685_01352;product=putative lipoprotein LprC;gene=lprC;Parent=GCA000153685_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900308.1,SO:0001217,UniParc:UPI0000165287,UniRef:UniRef100_O86337,UniRef:UniRef50_O86337,UniRef:UniRef90_O86337
contig_1	Pyrodigal	gene	1430612	1431118	.	-	.	ID=GCA000153685_01353_gene;locus_tag=GCA000153685_01353
contig_1	Pyrodigal	CDS	1430612	1431118	.	-	0	ID=GCA000153685_01353;Name=putative protein Rv1276c;locus_tag=GCA000153685_01353;product=putative protein Rv1276c;Dbxref=GO:0004722;Parent=GCA000153685_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898805.1,SO:0001217,UniParc:UPI0000165009,UniRef:UniRef100_P9WGF9,UniRef:UniRef50_P9WGF9,UniRef:UniRef90_P9WGF9;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	1431440	1432591	.	+	.	ID=GCA000153685_01354_gene;locus_tag=GCA000153685_01354
contig_1	Pyrodigal	CDS	1431440	1432591	.	+	0	ID=GCA000153685_01354;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000153685_01354;product=Calcineurin-like phosphoesterase domain-containing protein;Parent=GCA000153685_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911418.1,SO:0001217,UniParc:UPI00005F61D9,UniRef:UniRef100_Q50699,UniRef:UniRef50_Q50699,UniRef:UniRef90_Q50699
contig_1	Pyrodigal	gene	1432588	1435215	.	+	.	ID=GCA000153685_01355_gene;locus_tag=GCA000153685_01355
contig_1	Pyrodigal	CDS	1432588	1435215	.	+	0	ID=GCA000153685_01355;Name=putative protein Mb1309;locus_tag=GCA000153685_01355;product=putative protein Mb1309;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898806.1,SO:0001217,UniParc:UPI000013A53B,UniRef:UniRef100_P9WM41,UniRef:UniRef50_P9WM41,UniRef:UniRef90_P9WM41
contig_1	Pyrodigal	gene	1435236	1436822	.	+	.	ID=GCA000153685_01356_gene;locus_tag=GCA000153685_01356
contig_1	Pyrodigal	CDS	1435236	1436822	.	+	0	ID=GCA000153685_01356;Name=putative GMC-type oxidoreductase Rv1279;locus_tag=GCA000153685_01356;product=putative GMC-type oxidoreductase Rv1279;Dbxref=GO:0005829,GO:0005886,GO:0009274,GO:0016614,GO:0050660;Parent=GCA000153685_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406598.1,SO:0001217,UniParc:UPI000013A53F,UniRef:UniRef100_P9WMV5,UniRef:UniRef50_P9WMV5,UniRef:UniRef90_P9WMV5;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	1436839	1438476	.	-	.	ID=GCA000153685_01357_gene;locus_tag=GCA000153685_01357;gene=oppA
contig_1	Pyrodigal	CDS	1436839	1438476	.	-	0	ID=GCA000153685_01357;Name=oligopeptide ABC transporter substrate-binding protein OppA;locus_tag=GCA000153685_01357;product=oligopeptide ABC transporter substrate-binding protein OppA;Dbxref=GO:0005886,GO:0015833,GO:0017038,GO:0042277,GO:0042597,GO:0043190,GO:0043295,GO:1904680;gene=oppA;Parent=GCA000153685_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003232957,BlastRules:WP_003900310,SO:0001217,UniParc:UPI00005EE50B,UniRef:UniRef100_A0A0H3L925,UniRef:UniRef50_P9WGU5,UniRef:UniRef90_P9WGU5
contig_1	Pyrodigal	gene	1438607	1440445	.	-	.	ID=GCA000153685_01358_gene;locus_tag=GCA000153685_01358;gene=nikD
contig_1	Pyrodigal	CDS	1438607	1440445	.	-	0	ID=GCA000153685_01358;Name=nickel import ATP-binding protein NikD;locus_tag=GCA000153685_01358;product=nickel import ATP-binding protein NikD;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0015413,GO:0015675,GO:0015833,GO:0016151,GO:0016887,GO:0022857,GO:0043190,GO:0055085;gene=nikD;Parent=GCA000153685_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13892,RefSeq:WP_003406602.1,SO:0001217,UniParc:UPI000013A548,UniRef:UniRef100_P9WQJ5,UniRef:UniRef50_P9WQJ5,UniRef:UniRef90_P9WQJ5;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1440442	1441317	.	-	.	ID=GCA000153685_01359_gene;locus_tag=GCA000153685_01359
contig_1	Pyrodigal	CDS	1440442	1441317	.	-	0	ID=GCA000153685_01359;Name=Putative peptide transport permease protein Mb1313c;locus_tag=GCA000153685_01359;product=Putative peptide transport permease protein Mb1313c;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0055085;Parent=GCA000153685_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13891,RefSeq:WP_003406607.1,SO:0001217,UniParc:UPI000013A54D,UniRef:UniRef100_P9WFZ9,UniRef:UniRef50_P9WFZ9,UniRef:UniRef90_P9WFZ9
contig_1	Pyrodigal	gene	1441314	1442291	.	-	.	ID=GCA000153685_01360_gene;locus_tag=GCA000153685_01360
contig_1	Pyrodigal	CDS	1441314	1442291	.	-	0	ID=GCA000153685_01360;Name=Putative peptide transport permease protein Mb1314c;locus_tag=GCA000153685_01360;product=Putative peptide transport permease protein Mb1314c;Dbxref=GO:0005886,GO:0015031,GO:0015833,GO:0055085;Parent=GCA000153685_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13890,RefSeq:WP_003406613.1,SO:0001217,UniParc:UPI000013A551,UniRef:UniRef100_P9WFZ7,UniRef:UniRef50_P9WFZ7,UniRef:UniRef90_P9WFZ7
contig_1	Pyrodigal	gene	1442498	1442989	.	+	.	ID=GCA000153685_01361_gene;locus_tag=GCA000153685_01361;gene=canA
contig_1	Pyrodigal	CDS	1442498	1442989	.	+	0	ID=GCA000153685_01361;Name=beta-carbonic anhydrase CanA;locus_tag=GCA000153685_01361;product=beta-carbonic anhydrase CanA;Dbxref=GO:0004089,GO:0005886,GO:0008270;gene=canA;Parent=GCA000153685_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406616,KEGG:K01673,RefSeq:WP_003406616.1,SO:0001217,UniParc:UPI000013A555,UniRef:UniRef100_P9WPJ7,UniRef:UniRef50_P9WPJ7,UniRef:UniRef90_P9WPJ7;ec_number=4.2.1.1
contig_1	Pyrodigal	gene	1443083	1444081	.	+	.	ID=GCA000153685_01362_gene;locus_tag=GCA000153685_01362;gene=cysD
contig_1	Pyrodigal	CDS	1443083	1444081	.	+	0	ID=GCA000153685_01362;Name=sulfate adenylyltransferase subunit CysD;locus_tag=GCA000153685_01362;product=sulfate adenylyltransferase subunit CysD;Dbxref=GO:0000103,GO:0004781,GO:0005524,GO:0005829,GO:0009336,GO:0010134,GO:0010438,GO:0034599,GO:0070814;gene=cysD;Parent=GCA000153685_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00957,RefSeq:WP_003406618.1,SO:0001217,UniParc:UPI0000165288,UniRef:UniRef100_P9WIK1,UniRef:UniRef50_P9WIK1,UniRef:UniRef90_P9WIK1;ec_number=2.7.7.4
contig_1	Pyrodigal	gene	1444081	1445925	.	+	.	ID=GCA000153685_01363_gene;locus_tag=GCA000153685_01363;gene=cysNC
contig_1	Pyrodigal	CDS	1444081	1445925	.	+	0	ID=GCA000153685_01363;Name=Bifunctional enzyme CysN/CysC;locus_tag=GCA000153685_01363;product=Bifunctional enzyme CysN/CysC;Dbxref=GO:0003924,GO:0004020,GO:0004781,GO:0005524,GO:0005525,GO:0005829,GO:0005886,GO:0009336,GO:0010134,GO:0010438,GO:0034599,GO:0070814;gene=cysNC;Parent=GCA000153685_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2895,COG:P,KEGG:K00955,RefSeq:WP_003406621.1,SO:0001217,UniParc:UPI0000128D24,UniRef:UniRef100_P9WNM5,UniRef:UniRef50_P9WNM5,UniRef:UniRef90_P9WNM5;ec_number=2.7.7.4
contig_1	Pyrodigal	gene	1445979	1446464	.	+	.	ID=GCA000153685_01364_gene;locus_tag=GCA000153685_01364
contig_1	Pyrodigal	CDS	1445979	1446464	.	+	0	ID=GCA000153685_01364;Name=Putative HTH-type transcriptional regulator Rv1287;locus_tag=GCA000153685_01364;product=Putative HTH-type transcriptional regulator Rv1287;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355;Parent=GCA000153685_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406624.1,SO:0001217,UniParc:UPI000013A55D,UniRef:UniRef100_P9WME3,UniRef:UniRef50_P9WME3,UniRef:UniRef90_P9WME3
contig_1	Pyrodigal	gene	1446522	1447892	.	+	.	ID=GCA000153685_01365_gene;locus_tag=GCA000153685_01365
contig_1	Pyrodigal	CDS	1446522	1447892	.	+	0	ID=GCA000153685_01365;Name=esterase;locus_tag=GCA000153685_01365;product=esterase;Dbxref=GO:0005576,GO:0006629,GO:0008126,GO:0016747;Parent=GCA000153685_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406625,RefSeq:WP_003406625.1,SO:0001217,UniParc:UPI000013A560,UniRef:UniRef100_P9WM39,UniRef:UniRef50_P9WM39,UniRef:UniRef90_P9WM39;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	1447941	1448573	.	+	.	ID=GCA000153685_01366_gene;locus_tag=GCA000153685_01366
contig_1	Pyrodigal	CDS	1447941	1448573	.	+	0	ID=GCA000153685_01366;Name=putative protein Mb1320;locus_tag=GCA000153685_01366;product=putative protein Mb1320;Dbxref=GO:0009274;Parent=GCA000153685_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406626.1,SO:0001217,UniParc:UPI000013A562,UniRef:UniRef100_P9WM37,UniRef:UniRef50_P9WM37,UniRef:UniRef90_P9WM37
contig_1	Pyrodigal	gene	1448656	1450059	.	-	.	ID=GCA000153685_01367_gene;locus_tag=GCA000153685_01367
contig_1	Pyrodigal	CDS	1448656	1450059	.	-	0	ID=GCA000153685_01367;Name=putative protein Mb1321c;locus_tag=GCA000153685_01367;product=putative protein Mb1321c;Dbxref=GO:0005886;Parent=GCA000153685_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A381,UniRef:UniRef100_P9WM34,UniRef:UniRef50_P9WM35,UniRef:UniRef90_P9WM35
contig_1	Pyrodigal	gene	1450178	1450546	.	+	.	ID=GCA000153685_01368_gene;locus_tag=GCA000153685_01368
contig_1	Pyrodigal	CDS	1450178	1450546	.	+	0	ID=GCA000153685_01368;Name=hypothetical protein;locus_tag=GCA000153685_01368;product=hypothetical protein;Parent=GCA000153685_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2C0F,UniRef:UniRef100_Q8VK41,UniRef:UniRef50_R4LUA0,UniRef:UniRef90_R4LUA0
contig_1	Pyrodigal	gene	1450673	1451008	.	-	.	ID=GCA000153685_01369_gene;locus_tag=GCA000153685_01369
contig_1	Pyrodigal	CDS	1450673	1451008	.	-	0	ID=GCA000153685_01369;Name=putative protein Rv1291c;locus_tag=GCA000153685_01369;product=putative protein Rv1291c;Parent=GCA000153685_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406629.1,SO:0001217,UniParc:UPI000013A56B,UniRef:UniRef100_P9WM33,UniRef:UniRef50_P9WM33,UniRef:UniRef90_P9WM33
contig_1	tRNAscan-SE	gene	1451367	1451439	.	-	.	ID=GCA000153685_01370_gene;locus_tag=GCA000153685_01370;gene=trnR
contig_1	tRNAscan-SE	tRNA	1451367	1451439	.	-	.	ID=GCA000153685_01370;Name=tRNA-Arg(ccg);locus_tag=GCA000153685_01370;product=tRNA-Arg(ccg);gene=trnR;anti_codon=ccg;amino_acid=Arg;Parent=GCA000153685_01370_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	1451553	1453205	.	+	.	ID=GCA000153685_01371_gene;locus_tag=GCA000153685_01371;gene=argS
contig_1	Pyrodigal	CDS	1451553	1453205	.	+	0	ID=GCA000153685_01371;Name=arginine--tRNA ligase;locus_tag=GCA000153685_01371;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006420;gene=argS;Parent=GCA000153685_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_003406630.1,SO:0001217,UniParc:UPI0000136654,UniRef:UniRef100_P9WFW5,UniRef:UniRef50_B8DWR0,UniRef:UniRef90_P9WFW5;ec_number=6.1.1.19
contig_1	Pyrodigal	gene	1453202	1454545	.	+	.	ID=GCA000153685_01372_gene;locus_tag=GCA000153685_01372;gene=lysA
contig_1	Pyrodigal	CDS	1453202	1454545	.	+	0	ID=GCA000153685_01372;Name=diaminopimelate decarboxylase;locus_tag=GCA000153685_01372;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0009274,GO:0030170;gene=lysA;Parent=GCA000153685_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01586,RefSeq:WP_003406632.1,SO:0001217,UniParc:UPI0000128F70,UniRef:UniRef100_P9WIU7,UniRef:UniRef50_P9WIU7,UniRef:UniRef90_P9WIU7;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	1454549	1455874	.	+	.	ID=GCA000153685_01373_gene;locus_tag=GCA000153685_01373;gene=hom
contig_1	Pyrodigal	CDS	1454549	1455874	.	+	0	ID=GCA000153685_01373;Name=Homoserine dehydrogenase;locus_tag=GCA000153685_01373;product=Homoserine dehydrogenase;Dbxref=GO:0004412,GO:0009086,GO:0009088,GO:0046872,GO:0050661,GO:0070403;gene=hom;Parent=GCA000153685_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0460,COG:E,RefSeq:WP_003406648.1,SO:0001217,UniParc:UPI0000129354,UniRef:UniRef100_P9WPX1,UniRef:UniRef50_P9WPX1,UniRef:UniRef90_P9WPX1;ec_number=1.1.1.3
contig_1	Pyrodigal	gene	1455871	1456953	.	+	.	ID=GCA000153685_01374_gene;locus_tag=GCA000153685_01374;gene=thrC
contig_1	Pyrodigal	CDS	1455871	1456953	.	+	0	ID=GCA000153685_01374;Name=threonine synthase;locus_tag=GCA000153685_01374;product=threonine synthase;Dbxref=GO:0004795,GO:0005737,GO:0005829,GO:0005886,GO:0009088,GO:0019344,GO:0030170;gene=thrC;Parent=GCA000153685_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0498,COG:E,KEGG:K01733,RefSeq:WP_003406652.1,SO:0001217,UniParc:UPI0000136EDA,UniRef:UniRef100_P9WG59,UniRef:UniRef50_P9WG59,UniRef:UniRef90_P9WG59;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	1457057	1458007	.	+	.	ID=GCA000153685_01375_gene;locus_tag=GCA000153685_01375;gene=thrB
contig_1	Pyrodigal	CDS	1457057	1458007	.	+	0	ID=GCA000153685_01375;Name=homoserine kinase;locus_tag=GCA000153685_01375;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000153685_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00872,RefSeq:WP_003406654.1,SO:0001217,UniParc:UPI000012DE26,UniRef:UniRef100_P9WKE7,UniRef:UniRef50_P07128,UniRef:UniRef90_P9WKE7;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	1458264	1460072	.	+	.	ID=GCA000153685_01376_gene;locus_tag=GCA000153685_01376;gene=rho
contig_1	Pyrodigal	CDS	1458264	1460072	.	+	0	ID=GCA000153685_01376;Name=transcription termination factor Rho;locus_tag=GCA000153685_01376;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0004386,GO:0005524,GO:0005886,GO:0006353,GO:0006363,GO:0008186,GO:0009274,GO:0016887;gene=rho;Parent=GCA000153685_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03628,RefSeq:WP_003898814.1,SO:0001217,UniParc:UPI00001338A1,UniRef:UniRef100_P9WHF3,UniRef:UniRef50_P9WHF3,UniRef:UniRef90_P9WHF3;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1460223	1460465	.	+	.	ID=GCA000153685_01377_gene;locus_tag=GCA000153685_01377;gene=rpmE
contig_1	Pyrodigal	CDS	1460223	1460465	.	+	0	ID=GCA000153685_01377;Name=50S ribosomal protein L31;locus_tag=GCA000153685_01377;product=50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0046872,GO:1990904;gene=rpmE;Parent=GCA000153685_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406668.1,SO:0001217,UniParc:UPI0000133F1A,UniRef:UniRef100_P9WHA1,UniRef:UniRef50_P9WHA1,UniRef:UniRef90_P9WHA1
contig_1	Pyrodigal	gene	1460555	1461628	.	+	.	ID=GCA000153685_01378_gene;locus_tag=GCA000153685_01378;gene=prfA
contig_1	Pyrodigal	CDS	1460555	1461628	.	+	0	ID=GCA000153685_01378;Name=peptide chain release factor 1;locus_tag=GCA000153685_01378;product=peptide chain release factor 1;Dbxref=GO:0003747,GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000153685_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02835,RefSeq:WP_003406670.1,SO:0001217,UniParc:UPI0000133741,UniRef:UniRef100_P9WHG3,UniRef:UniRef50_P45833,UniRef:UniRef90_P9WHG3
contig_1	Pyrodigal	gene	1461625	1462602	.	+	.	ID=GCA000153685_01379_gene;locus_tag=GCA000153685_01379;gene=prmC
contig_1	Pyrodigal	CDS	1461625	1462602	.	+	0	ID=GCA000153685_01379;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000153685_01379;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000153685_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02493,RefSeq:WP_003406673.1,SO:0001217,UniParc:UPI00001A8FC8,UniRef:UniRef100_P9WHV2,UniRef:UniRef50_P9WHV3,UniRef:UniRef90_P9WHV3;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	1462618	1463271	.	+	.	ID=GCA000153685_01380_gene;locus_tag=GCA000153685_01380
contig_1	Pyrodigal	CDS	1462618	1463271	.	+	0	ID=GCA000153685_01380;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000153685_01380;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0000049,GO:0003725,GO:0005524,GO:0005737,GO:0006400,GO:0006450,GO:0008033,GO:0016779,GO:0061710;Parent=GCA000153685_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898815.1,SO:0001217,UniParc:UPI000013A7B0,UniRef:UniRef100_P9WGC9,UniRef:UniRef50_P9WGC9,UniRef:UniRef90_P9WGC9;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	1463355	1464569	.	+	.	ID=GCA000153685_01381_gene;locus_tag=GCA000153685_01381;gene=rfe
contig_1	Pyrodigal	CDS	1463355	1464569	.	+	0	ID=GCA000153685_01381;Name=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;locus_tag=GCA000153685_01381;product=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;Dbxref=GO:0000287,GO:0005886,GO:0009103,GO:0016757,GO:0016780,GO:0030145,GO:0044038,GO:0045227,GO:0071555;gene=rfe;Parent=GCA000153685_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898816,BlastRules:WP_011730204,COG:COG0472,COG:M,RefSeq:WP_003898816.1,SO:0001217,UniParc:UPI00001337FA,UniRef:UniRef100_P9WMW5,UniRef:UniRef50_A0R211,UniRef:UniRef90_P9WMW5;ec_number=2.7.8.35
contig_1	Pyrodigal	gene	1464826	1465311	.	+	.	ID=GCA000153685_01382_gene;locus_tag=GCA000153685_01382
contig_1	Pyrodigal	CDS	1464826	1465311	.	+	0	ID=GCA000153685_01382;Name=putative protein Rv1303;locus_tag=GCA000153685_01382;product=putative protein Rv1303;Dbxref=GO:0005886;Parent=GCA000153685_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406680.1,SO:0001217,UniParc:UPI0000031862,UniRef:UniRef100_P9WM31,UniRef:UniRef50_P9WM31,UniRef:UniRef90_P9WM31
contig_1	Pyrodigal	gene	1465304	1466056	.	+	.	ID=GCA000153685_01383_gene;locus_tag=GCA000153685_01383;gene=atpB
contig_1	Pyrodigal	CDS	1465304	1466056	.	+	0	ID=GCA000153685_01383;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000153685_01383;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000153685_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_003406681.1,SO:0001217,UniParc:UPI000012631C,UniRef:UniRef100_P9WPV7,UniRef:UniRef50_P9WPV7,UniRef:UniRef90_P9WPV7;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1466105	1466350	.	+	.	ID=GCA000153685_01384_gene;locus_tag=GCA000153685_01384;gene=atpE
contig_1	Pyrodigal	CDS	1466105	1466350	.	+	0	ID=GCA000153685_01384;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000153685_01384;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000153685_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_003406686.1,SO:0001217,UniParc:UPI00001265D3,UniRef:UniRef100_P9WPS1,UniRef:UniRef50_P9WPS1,UniRef:UniRef90_P9WPS1;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1466381	1466896	.	+	.	ID=GCA000153685_01385_gene;locus_tag=GCA000153685_01385;gene=atpF
contig_1	Pyrodigal	CDS	1466381	1466896	.	+	0	ID=GCA000153685_01385;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000153685_01385;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0045263,GO:0046933,GO:0046961;gene=atpF;Parent=GCA000153685_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898818.1,SO:0001217,UniParc:UPI000012654C,UniRef:UniRef100_P9WPV5,UniRef:UniRef50_A0R204,UniRef:UniRef90_P9WPV5;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1466903	1468243	.	+	.	ID=GCA000153685_01386_gene;locus_tag=GCA000153685_01386;gene=atpFH
contig_1	Pyrodigal	CDS	1466903	1468243	.	+	0	ID=GCA000153685_01386;Name=F0F1 ATP synthase subunit B/delta;locus_tag=GCA000153685_01386;product=F0F1 ATP synthase subunit B/delta;Dbxref=GO:0005886,GO:0045261,GO:0045263,GO:0046933;gene=atpFH;Parent=GCA000153685_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406697.1,SO:0001217,UniParc:UPI00001264AD,UniRef:UniRef100_P9WPV3,UniRef:UniRef50_P9WPV3,UniRef:UniRef90_P9WPV3;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1468288	1469937	.	+	.	ID=GCA000153685_01387_gene;locus_tag=GCA000153685_01387;gene=atpA
contig_1	Pyrodigal	CDS	1468288	1469937	.	+	0	ID=GCA000153685_01387;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000153685_01387;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000153685_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406699.1,SO:0001217,UniParc:UPI00001263FC,UniRef:UniRef100_P9WPU7,UniRef:UniRef50_P9WPU7,UniRef:UniRef90_P9WPU7;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1469944	1470861	.	+	.	ID=GCA000153685_01388_gene;locus_tag=GCA000153685_01388;gene=atpG
contig_1	Pyrodigal	CDS	1469944	1470861	.	+	0	ID=GCA000153685_01388;Name=F0F1 ATP synthase subunit gamma;locus_tag=GCA000153685_01388;product=F0F1 ATP synthase subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000153685_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02115,RefSeq:WP_003898819.1,SO:0001217,UniParc:UPI000012657C,UniRef:UniRef100_P9WPU9,UniRef:UniRef50_A0R201,UniRef:UniRef90_P9WPU9;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1470901	1472361	.	+	.	ID=GCA000153685_01389_gene;locus_tag=GCA000153685_01389;gene=atpD
contig_1	Pyrodigal	CDS	1470901	1472361	.	+	0	ID=GCA000153685_01389;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000153685_01389;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000153685_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_003406701.1,SO:0001217,UniParc:UPI0000126463,UniRef:UniRef100_P9WPU5,UniRef:UniRef50_P06541,UniRef:UniRef90_P9WPU5;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1472375	1472740	.	+	.	ID=GCA000153685_01390_gene;locus_tag=GCA000153685_01390;gene=atpC
contig_1	Pyrodigal	CDS	1472375	1472740	.	+	0	ID=GCA000153685_01390;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000153685_01390;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000153685_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406708.1,SO:0001217,UniParc:UPI00001264FD,UniRef:UniRef100_P9WPV1,UniRef:UniRef50_P9WPV1,UniRef:UniRef90_P9WPV1;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	1472760	1473191	.	+	.	ID=GCA000153685_01391_gene;locus_tag=GCA000153685_01391
contig_1	Pyrodigal	CDS	1472760	1473191	.	+	0	ID=GCA000153685_01391;Name=putative protein Rv1312;locus_tag=GCA000153685_01391;product=putative protein Rv1312;Dbxref=GO:0016020;Parent=GCA000153685_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901128.1,SO:0001217,UniParc:UPI000190110F,UniRef:UniRef100_P9WM29,UniRef:UniRef50_P9WM29,UniRef:UniRef90_P9WM29
contig_1	Pyrodigal	gene	1473231	1474565	.	-	.	ID=GCA000153685_01392_gene;locus_tag=GCA000153685_01392;gene=tnp
contig_1	Pyrodigal	CDS	1473231	1474565	.	-	0	ID=GCA000153685_01392;Name=ISL3 family IS1557 transposase;locus_tag=GCA000153685_01392;product=ISL3 family IS1557 transposase;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006310,GO:0009274,GO:0032196;gene=tnp;Parent=GCA000153685_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1557,KEGG:K07485,RefSeq:WP_003900311.1,SO:0001217,UniParc:UPI0000165010,UniRef:UniRef100_A0A0H3LEZ0,UniRef:UniRef50_P9WKH7,UniRef:UniRef90_P9WKH7
contig_1	Pyrodigal	gene	1474731	1475312	.	-	.	ID=GCA000153685_01393_gene;locus_tag=GCA000153685_01393
contig_1	Pyrodigal	CDS	1474731	1475312	.	-	0	ID=GCA000153685_01393;Name=Corrinoid adenosyltransferase;locus_tag=GCA000153685_01393;product=Corrinoid adenosyltransferase;Dbxref=GO:0005524,GO:0005737,GO:0006779,GO:0008817,GO:0009236;Parent=GCA000153685_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406839.1,SO:0001217,UniParc:UPI000013A7D0,UniRef:UniRef100_P9WP99,UniRef:UniRef50_P9WP99,UniRef:UniRef90_P9WP99;ec_number=2.5.1.17
contig_1	Pyrodigal	gene	1475381	1476637	.	+	.	ID=GCA000153685_01394_gene;locus_tag=GCA000153685_01394;gene=murA
contig_1	Pyrodigal	CDS	1475381	1476637	.	+	0	ID=GCA000153685_01394;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000153685_01394;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA;Parent=GCA000153685_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_003406845.1,SO:0001217,UniParc:UPI000012F919,UniRef:UniRef100_P9WJM1,UniRef:UniRef50_P9WJM1,UniRef:UniRef90_P9WJM1;ec_number=2.5.1.7
contig_1	Infernal	gene	1476909	1478440	.	+	.	ID=GCA000153685_01395_gene;locus_tag=GCA000153685_01395;gene=rrs
contig_1	Infernal	rRNA	1476909	1478440	1e-47	+	.	ID=GCA000153685_01395;Name=16S ribosomal RNA;locus_tag=GCA000153685_01395;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000153685_01395_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Infernal	gene	1478718	1481855	.	+	.	ID=GCA000153685_01396_gene;locus_tag=GCA000153685_01396;gene=rrl
contig_1	Infernal	rRNA	1478718	1481855	9.8e-06	+	.	ID=GCA000153685_01396;Name=23S ribosomal RNA;locus_tag=GCA000153685_01396;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000153685_01396_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	1481960	1482072	.	+	.	ID=GCA000153685_01397_gene;locus_tag=GCA000153685_01397;gene=rrf
contig_1	Infernal	rRNA	1481960	1482072	7.8e-14	+	.	ID=GCA000153685_01397;Name=5S ribosomal RNA;locus_tag=GCA000153685_01397;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000153685_01397_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	1482194	1482691	.	-	.	ID=GCA000153685_01398_gene;locus_tag=GCA000153685_01398;gene=ogt
contig_1	Pyrodigal	CDS	1482194	1482691	.	-	0	ID=GCA000153685_01398;Name=methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA000153685_01398;product=methylated-DNA--protein-cysteine methyltransferase;Dbxref=GO:0003908,GO:0005737,GO:0005886,GO:0006307,GO:0032259,GO:0051409;gene=ogt;Parent=GCA000153685_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003232502,BlastRules:WP_003406857,RefSeq:WP_003900312.1,SO:0001217,UniParc:UPI00012781D4,UniRef:UniRef100_A0A0H3L953,UniRef:UniRef50_P9WJW5,UniRef:UniRef90_P9WJW5;ec_number=2.1.1.63
contig_1	Pyrodigal	gene	1482688	1484178	.	-	.	ID=GCA000153685_01399_gene;locus_tag=GCA000153685_01399;gene=alkA
contig_1	Pyrodigal	CDS	1482688	1484178	.	-	0	ID=GCA000153685_01399;Name=bifunctional regulatory protein/DNA repair enzyme AlkA;locus_tag=GCA000153685_01399;product=bifunctional regulatory protein/DNA repair enzyme AlkA;Dbxref=GO:0003700,GO:0005737,GO:0005886,GO:0006285,GO:0006307,GO:0008168,GO:0008270,GO:0008725,GO:0009274,GO:0032131,GO:0032259,GO:0032993,GO:0043565,GO:0043916,GO:0051409,GO:0052821,GO:0052822,GO:1990053;gene=alkA;Parent=GCA000153685_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900313,KEGG:K13529,RefSeq:WP_003900313.1,SO:0001217,UniParc:UPI00001254EC,UniRef:UniRef100_P9WJW3,UniRef:UniRef50_P9WJW3,UniRef:UniRef90_P9WJW3;ec_number=3.2.2.21
contig_1	Pyrodigal	gene	1484259	1485884	.	-	.	ID=GCA000153685_01400_gene;locus_tag=GCA000153685_01400
contig_1	Pyrodigal	CDS	1484259	1485884	.	-	0	ID=GCA000153685_01400;Name=putative protein Mb1352c;locus_tag=GCA000153685_01400;product=putative protein Mb1352c;Dbxref=GO:0004016,GO:0005886,GO:0006171,GO:0035556;Parent=GCA000153685_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406864.1,SO:0001217,UniParc:UPI000013A7DB,UniRef:UniRef100_P9WQ33,UniRef:UniRef50_P9WQ33,UniRef:UniRef90_P9WQ33
contig_1	Pyrodigal	gene	1485954	1487552	.	-	.	ID=GCA000153685_01401_gene;locus_tag=GCA000153685_01401
contig_1	Pyrodigal	CDS	1485954	1487552	.	-	0	ID=GCA000153685_01401;Name=Adenylate cyclase;locus_tag=GCA000153685_01401;product=Adenylate cyclase;Parent=GCA000153685_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900314.1,SO:0001217,UniParc:UPI00012781D5,UniRef:UniRef100_UPI00012781D5,UniRef:UniRef50_P9WQ33,UniRef:UniRef90_A0A655ADG1
contig_1	Pyrodigal	gene	1487559	1489235	.	-	.	ID=GCA000153685_01402_gene;locus_tag=GCA000153685_01402
contig_1	Pyrodigal	CDS	1487559	1489235	.	-	0	ID=GCA000153685_01402;Name=putative protein MT1361;locus_tag=GCA000153685_01402;product=putative protein MT1361;Dbxref=GO:0004016,GO:0005886,GO:0006171,GO:0035556;Parent=GCA000153685_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900315.1,SO:0001217,UniParc:UPI0000F51800,UniRef:UniRef100_A0A0H3LCA6,UniRef:UniRef50_P9WQ33,UniRef:UniRef90_P9WQ30
contig_1	Pyrodigal	gene	1489248	1490819	.	-	.	ID=GCA000153685_01403_gene;locus_tag=GCA000153685_01403
contig_1	Pyrodigal	CDS	1489248	1490819	.	-	0	ID=GCA000153685_01403;Name=putative protein Rv1320c;locus_tag=GCA000153685_01403;product=putative protein Rv1320c;Dbxref=GO:0004016,GO:0005829,GO:0005886,GO:0006171,GO:0009274,GO:0035556;Parent=GCA000153685_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE519,UniRef:UniRef100_P9WQ28,UniRef:UniRef50_P9WQ29,UniRef:UniRef90_P9WQ29
contig_1	Pyrodigal	gene	1491022	1491693	.	+	.	ID=GCA000153685_01404_gene;locus_tag=GCA000153685_01404;gene=nucS
contig_1	Pyrodigal	CDS	1491022	1491693	.	+	0	ID=GCA000153685_01404;Name=endonuclease NucS;locus_tag=GCA000153685_01404;product=endonuclease NucS;Dbxref=GO:0000014,GO:0003677,GO:0004519,GO:0005737;gene=nucS;Parent=GCA000153685_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1637,COG:L,KEGG:K07503,RefSeq:WP_003406872.1,SO:0001217,UniParc:UPI00005EE51A,UniRef:UniRef100_A0A0H3LEZ8,UniRef:UniRef50_P9WIY5,UniRef:UniRef90_P9WIY5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1492047	1492502	.	-	.	ID=GCA000153685_01405_gene;locus_tag=GCA000153685_01405;gene=mce
contig_1	Pyrodigal	CDS	1492047	1492502	.	-	0	ID=GCA000153685_01405;Name=methylmalonyl-CoA epimerase;locus_tag=GCA000153685_01405;product=methylmalonyl-CoA epimerase;gene=mce;Parent=GCA000153685_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012781D6,UniRef:UniRef100_A0A2I7W6M8,UniRef:UniRef50_A0A0J6W1K6,UniRef:UniRef90_A0A2I7W6M8;ec_number=5.1.99.1
contig_1	Pyrodigal	gene	1492635	1493765	.	+	.	ID=GCA000153685_01406_gene;locus_tag=GCA000153685_01406;gene=fadA4
contig_1	Pyrodigal	CDS	1492635	1493765	.	+	0	ID=GCA000153685_01406;Name=putative acetyl-CoA acetyltransferase;locus_tag=GCA000153685_01406;product=putative acetyl-CoA acetyltransferase;Dbxref=GO:0003985,GO:0005576,GO:0005886,GO:0052572;gene=fadA4;Parent=GCA000153685_01406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE51C,UniRef:UniRef100_P9WG69,UniRef:UniRef50_P9WG69,UniRef:UniRef90_P9WG69;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	1493928	1494809	.	+	.	ID=GCA000153685_01407_gene;locus_tag=GCA000153685_01407
contig_1	Pyrodigal	CDS	1493928	1494809	.	+	0	ID=GCA000153685_01407;Name=putative protein Mb1359;locus_tag=GCA000153685_01407;product=putative protein Mb1359;Dbxref=GO:0006950,GO:0016491,GO:0045454;Parent=GCA000153685_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911493.1,SO:0001217,UniParc:UPI00005F61E5,UniRef:UniRef100_P9WG61,UniRef:UniRef50_P9WG61,UniRef:UniRef90_P9WG61
contig_1	Pyrodigal	gene	1494888	1496699	.	-	.	ID=GCA000153685_01408_gene;locus_tag=GCA000153685_01408;gene=pE_PGRS24
contig_1	Pyrodigal	CDS	1494888	1496699	.	-	0	ID=GCA000153685_01408;Name=putative PE-PGRS family protein PE_PGRS24;locus_tag=GCA000153685_01408;product=putative PE-PGRS family protein PE_PGRS24;gene=pE_PGRS24;Parent=GCA000153685_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886112.1,SO:0001217,UniParc:UPI000013A7F3,UniRef:UniRef100_P9WIF7,UniRef:UniRef50_P9WIF6,UniRef:UniRef90_P9WIF6
contig_1	Pyrodigal	gene	1496851	1499046	.	-	.	ID=GCA000153685_01409_gene;locus_tag=GCA000153685_01409;gene=glgB
contig_1	Pyrodigal	CDS	1496851	1499046	.	-	0	ID=GCA000153685_01409;Name=1%2C4-alpha-glucan branching protein GlgB;locus_tag=GCA000153685_01409;product=1%2C4-alpha-glucan branching protein GlgB;Dbxref=GO:0003844,GO:0004553,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005978,GO:0009250,GO:0043169,GO:0045227;gene=glgB;Parent=GCA000153685_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00700,RefSeq:WP_003900318.1,SO:0001217,UniParc:UPI000012B5B1,UniRef:UniRef100_P9WN45,UniRef:UniRef50_P9WN45,UniRef:UniRef90_P9WN45;ec_number=2.4.1.18
contig_1	Pyrodigal	gene	1499054	1501120	.	-	.	ID=GCA000153685_01410_gene;locus_tag=GCA000153685_01410;gene=glgE
contig_1	Pyrodigal	CDS	1499054	1501120	.	-	0	ID=GCA000153685_01410;Name=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;locus_tag=GCA000153685_01410;product=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;Dbxref=GO:0004553,GO:0005978,GO:0016758,GO:0030979;gene=glgE;Parent=GCA000153685_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003915171,KEGG:K16147,RefSeq:WP_003915171.1,SO:0001217,UniParc:UPI00005EE51F,UniRef:UniRef100_A0A0H3LCB2,UniRef:UniRef50_P9WQ17,UniRef:UniRef90_P9WQ17;ec_number=2.4.99.16
contig_1	Pyrodigal	gene	1501298	1503889	.	+	.	ID=GCA000153685_01411_gene;locus_tag=GCA000153685_01411;gene=glgP
contig_1	Pyrodigal	CDS	1501298	1503889	.	+	0	ID=GCA000153685_01411;Name=Glycogen phosphorylase;locus_tag=GCA000153685_01411;product=Glycogen phosphorylase;Dbxref=GO:0005829,GO:0005886,GO:0005977,GO:0008184,GO:0030170,GO:0031220;gene=glgP;Parent=GCA000153685_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900319.1,SO:0001217,UniParc:UPI0000165018,UniRef:UniRef100_P9WMW0,UniRef:UniRef50_P9WMW1,UniRef:UniRef90_P9WMW1;ec_number=2.4.1.1
contig_1	Pyrodigal	gene	1503929	1505905	.	-	.	ID=GCA000153685_01412_gene;locus_tag=GCA000153685_01412;gene=dinG
contig_1	Pyrodigal	CDS	1503929	1505905	.	-	0	ID=GCA000153685_01412;Name=ATP-dependent helicase DinG;locus_tag=GCA000153685_01412;product=ATP-dependent helicase DinG;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005886,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0046872,GO:0051539,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=dinG;Parent=GCA000153685_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898827,KEGG:K03722,SO:0001217,UniParc:UPI00005EE520,UniRef:UniRef100_P9WMR5,UniRef:UniRef50_P9WMR5,UniRef:UniRef90_P9WMR5;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	1505947	1507293	.	-	.	ID=GCA000153685_01413_gene;locus_tag=GCA000153685_01413;gene=pncB1
contig_1	Pyrodigal	CDS	1505947	1507293	.	-	0	ID=GCA000153685_01413;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000153685_01413;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004514,GO:0004516,GO:0005829,GO:0009274,GO:0009435,GO:0034355,GO:0047280;gene=pncB1;Parent=GCA000153685_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00763,RefSeq:WP_003900321.1,SO:0001217,UniParc:UPI0000165019,UniRef:UniRef100_P9WJI8,UniRef:UniRef50_P9WJI9,UniRef:UniRef90_P9WJI9;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	1507395	1507700	.	+	.	ID=GCA000153685_01414_gene;locus_tag=GCA000153685_01414;gene=clpS
contig_1	Pyrodigal	CDS	1507395	1507700	.	+	0	ID=GCA000153685_01414;Name=ATP-dependent Clp protease adapter ClpS;locus_tag=GCA000153685_01414;product=ATP-dependent Clp protease adapter ClpS;Dbxref=GO:0006508,GO:0030163;gene=clpS;Parent=GCA000153685_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406906.1,SO:0001217,UniParc:UPI000013A80E,UniRef:UniRef100_P9WPC1,UniRef:UniRef50_Q73X80,UniRef:UniRef90_P9WPC1
contig_1	Pyrodigal	gene	1507726	1508316	.	+	.	ID=GCA000153685_01415_gene;locus_tag=GCA000153685_01415;gene=aosR
contig_1	Pyrodigal	CDS	1507726	1508316	.	+	0	ID=GCA000153685_01415;Name=Oxidative stress regulator AosR;locus_tag=GCA000153685_01415;product=Oxidative stress regulator AosR;gene=aosR;Parent=GCA000153685_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406907.1,SO:0001217,UniParc:UPI00005EE521,UniRef:UniRef100_A0A0H3LCB6,UniRef:UniRef50_P9WM25,UniRef:UniRef90_P9WM25
contig_1	Pyrodigal	gene	1508333	1509367	.	+	.	ID=GCA000153685_01416_gene;locus_tag=GCA000153685_01416
contig_1	Pyrodigal	CDS	1508333	1509367	.	+	0	ID=GCA000153685_01416;Name=putative aminopeptidase Rv1333;locus_tag=GCA000153685_01416;product=putative aminopeptidase Rv1333;Dbxref=GO:0004177,GO:0005886,GO:0006508;Parent=GCA000153685_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406908.1,SO:0001217,UniParc:UPI000013A816,UniRef:UniRef100_P9WM23,UniRef:UniRef50_P9WM23,UniRef:UniRef90_P9WM23;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	1509402	1509815	.	+	.	ID=GCA000153685_01417_gene;locus_tag=GCA000153685_01417;gene=mec
contig_1	Pyrodigal	CDS	1509402	1509815	.	+	0	ID=GCA000153685_01417;Name=CysO-cysteine peptidase;locus_tag=GCA000153685_01417;product=CysO-cysteine peptidase;gene=mec;Parent=GCA000153685_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898830,KEGG:K21140,SO:0001217,UniParc:UPI000169A43E,UniRef:UniRef100_A0A0E8NI43,UniRef:UniRef50_P9WHS1,UniRef:UniRef90_A0A0E8NI43;ec_number=3.13.1.6
contig_1	Pyrodigal	gene	1509837	1510118	.	+	.	ID=GCA000153685_01418_gene;locus_tag=GCA000153685_01418;gene=cysO
contig_1	Pyrodigal	CDS	1509837	1510118	.	+	0	ID=GCA000153685_01418;Name=sulfur carrier protein CysO;locus_tag=GCA000153685_01418;product=sulfur carrier protein CysO;Dbxref=GO:0019344;gene=cysO;Parent=GCA000153685_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406910,RefSeq:WP_003406910.1,SO:0001217,UniParc:UPI000015A6C0,UniRef:UniRef100_P9WP33,UniRef:UniRef50_P9WP33,UniRef:UniRef90_P9WP33
contig_1	Pyrodigal	gene	1510128	1511099	.	+	.	ID=GCA000153685_01419_gene;locus_tag=GCA000153685_01419;gene=cysM
contig_1	Pyrodigal	CDS	1510128	1511099	.	+	0	ID=GCA000153685_01419;Name=O-phosphoserine sulfhydrylase;locus_tag=GCA000153685_01419;product=O-phosphoserine sulfhydrylase;Dbxref=GO:0004124,GO:0005737,GO:0005829,GO:0006535,GO:0019344,GO:0030170,GO:0032991,GO:0033847;gene=cysM;Parent=GCA000153685_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406912,RefSeq:WP_003406912.1,SO:0001217,UniParc:UPI0000128D1F,UniRef:UniRef100_P9WP53,UniRef:UniRef50_P9WP53,UniRef:UniRef90_P9WP53;ec_number=2.5.1.113
contig_1	Pyrodigal	gene	1511129	1511812	.	+	.	ID=GCA000153685_01420_gene;locus_tag=GCA000153685_01420
contig_1	Pyrodigal	CDS	1511129	1511812	.	+	0	ID=GCA000153685_01420;Name=putative protein Rv1337;locus_tag=GCA000153685_01420;product=putative protein Rv1337;Dbxref=GO:0004252,GO:0005886;Parent=GCA000153685_01420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016501A,UniRef:UniRef100_A0A0E9AGW3,UniRef:UniRef50_P9WM21,UniRef:UniRef90_P9WM21
contig_1	Pyrodigal	gene	1511809	1512624	.	+	.	ID=GCA000153685_01421_gene;locus_tag=GCA000153685_01421;gene=murI
contig_1	Pyrodigal	CDS	1511809	1512624	.	+	0	ID=GCA000153685_01421;Name=glutamate racemase;locus_tag=GCA000153685_01421;product=glutamate racemase;Dbxref=GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=murI;Parent=GCA000153685_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406919.1,SO:0001217,UniParc:UPI000012FA0E,UniRef:UniRef100_P9WPW9,UniRef:UniRef50_P9WPW9,UniRef:UniRef90_P9WPW9;ec_number=5.1.1.3
contig_1	Pyrodigal	gene	1512714	1513472	.	+	.	ID=GCA000153685_01422_gene;locus_tag=GCA000153685_01422;gene=elaC
contig_1	Pyrodigal	CDS	1512714	1513472	.	+	0	ID=GCA000153685_01422;Name=cyclic nucleotide-degrading phosphodiesterase;locus_tag=GCA000153685_01422;product=cyclic nucleotide-degrading phosphodiesterase;gene=elaC;Parent=GCA000153685_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1234,COG:J,KEGG:K00784,SO:0001217,UniParc:UPI0004B15332,UniRef:UniRef100_A0A0E8V7K7,UniRef:UniRef50_P9WGC1,UniRef:UniRef90_A0A655AFV5;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	1513489	1514268	.	+	.	ID=GCA000153685_01423_gene;locus_tag=GCA000153685_01423;gene=rph
contig_1	Pyrodigal	CDS	1513489	1514268	.	+	0	ID=GCA000153685_01423;Name=ribonuclease PH;locus_tag=GCA000153685_01423;product=ribonuclease PH;Dbxref=GO:0000049,GO:0000175,GO:0006364,GO:0008033,GO:0009022,GO:0016075;gene=rph;Parent=GCA000153685_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0689,COG:J,RefSeq:WP_003406926.1,SO:0001217,UniParc:UPI000013445E,UniRef:UniRef100_P9WGZ7,UniRef:UniRef50_P9WGZ7,UniRef:UniRef90_P9WGZ7;ec_number=2.7.7.56
contig_1	Pyrodigal	gene	1514316	1514921	.	+	.	ID=GCA000153685_01424_gene;locus_tag=GCA000153685_01424;gene=rdgB
contig_1	Pyrodigal	CDS	1514316	1514921	.	+	0	ID=GCA000153685_01424;Name=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;locus_tag=GCA000153685_01424;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;Dbxref=GO:0000166,GO:0005737,GO:0005829,GO:0006281,GO:0009117,GO:0009143,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872,GO:0047429;gene=rdgB;Parent=GCA000153685_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01519,RefSeq:WP_003911498.1,SO:0001217,UniParc:UPI0001E61DE9,UniRef:UniRef100_A0A0H3L8L4,UniRef:UniRef50_P9WMR7,UniRef:UniRef90_P9WMR7;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	1514918	1515280	.	-	.	ID=GCA000153685_01425_gene;locus_tag=GCA000153685_01425
contig_1	Pyrodigal	CDS	1514918	1515280	.	-	0	ID=GCA000153685_01425;Name=putative protein Rv1342c;locus_tag=GCA000153685_01425;product=putative protein Rv1342c;Dbxref=GO:0005886;Parent=GCA000153685_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406937.1,SO:0001217,UniParc:UPI000013A836,UniRef:UniRef100_P9WM19,UniRef:UniRef50_P9WM19,UniRef:UniRef90_P9WM19
contig_1	Pyrodigal	gene	1515277	1515657	.	-	.	ID=GCA000153685_01426_gene;locus_tag=GCA000153685_01426;gene=lprD
contig_1	Pyrodigal	CDS	1515277	1515657	.	-	0	ID=GCA000153685_01426;Name=Putative lipoprotein LprD;locus_tag=GCA000153685_01426;product=Putative lipoprotein LprD;Dbxref=GO:0005886;gene=lprD;Parent=GCA000153685_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898833.1,SO:0001217,UniParc:UPI000013A83C,UniRef:UniRef100_P9WK51,UniRef:UniRef50_P9WK51,UniRef:UniRef90_P9WK51
contig_1	Pyrodigal	gene	1515768	1516022	.	+	.	ID=GCA000153685_01427_gene;locus_tag=GCA000153685_01427;gene=mbtL
contig_1	Pyrodigal	CDS	1515768	1516022	.	+	0	ID=GCA000153685_01427;Name=mycobactin biosynthesis acyl carrier protein MbtL;locus_tag=GCA000153685_01427;product=mycobactin biosynthesis acyl carrier protein MbtL;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0009245,GO:0016020,GO:0019540;gene=mbtL;Parent=GCA000153685_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003893505,BlastRules:WP_003911484,RefSeq:WP_003911484.1,SO:0001217,UniParc:UPI0000125319,UniRef:UniRef100_P9WQF1,UniRef:UniRef50_P9WQF1,UniRef:UniRef90_P9WQF1
contig_1	Pyrodigal	gene	1516015	1517580	.	+	.	ID=GCA000153685_01428_gene;locus_tag=GCA000153685_01428;gene=mbtM
contig_1	Pyrodigal	CDS	1516015	1517580	.	+	0	ID=GCA000153685_01428;Name=putative fatty acyl-AMP ligase MbtM;locus_tag=GCA000153685_01428;product=putative fatty acyl-AMP ligase MbtM;Dbxref=GO:0005524,GO:0006633,GO:0008922,GO:0051701,GO:0070566;gene=mbtM;Parent=GCA000153685_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01909,RefSeq:WP_003406950.1,SO:0001217,UniParc:UPI000012A5C7,UniRef:UniRef100_P9WQ41,UniRef:UniRef50_A0QUA1,UniRef:UniRef90_P9WQ41,VFDB:VFC0272,VFDB:VFG001393;ec_number=6.2.1.47
contig_1	Pyrodigal	gene	1517580	1518740	.	+	.	ID=GCA000153685_01429_gene;locus_tag=GCA000153685_01429;gene=mbtN
contig_1	Pyrodigal	CDS	1517580	1518740	.	+	0	ID=GCA000153685_01429;Name=acyl-ACP dehydrogenase MbtN;locus_tag=GCA000153685_01429;product=acyl-ACP dehydrogenase MbtN;Dbxref=GO:0003995,GO:0005737,GO:0019540,GO:0033539,GO:0050660,GO:0141148;gene=mbtN;Parent=GCA000153685_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406953,RefSeq:WP_003406953.1,SO:0001217,UniParc:UPI000013A845,UniRef:UniRef100_P9WQF9,UniRef:UniRef50_P9WQF9,UniRef:UniRef90_P9WQF9;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	1518707	1519339	.	-	.	ID=GCA000153685_01430_gene;locus_tag=GCA000153685_01430;gene=mbtK
contig_1	Pyrodigal	CDS	1518707	1519339	.	-	0	ID=GCA000153685_01430;Name=lysine N-acyltransferase MbtK;locus_tag=GCA000153685_01430;product=lysine N-acyltransferase MbtK;Dbxref=GO:0016410,GO:0016747,GO:0019540,GO:0047617;gene=mbtK;Parent=GCA000153685_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406956,KEGG:K21992,RefSeq:WP_003406956.1,SO:0001217,UniParc:UPI000013A847,UniRef:UniRef100_P9WK15,UniRef:UniRef50_P9WK15,UniRef:UniRef90_P9WK15;ec_number=2.3.1.-
contig_1	tRNAscan-SE	gene	1519462	1519545	.	+	.	ID=GCA000153685_01431_gene;locus_tag=GCA000153685_01431;gene=trnL
contig_1	tRNAscan-SE	tRNA	1519462	1519545	.	+	.	ID=GCA000153685_01431;Name=tRNA-Leu(tag);locus_tag=GCA000153685_01431;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000153685_01431_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	1519781	1522360	.	+	.	ID=GCA000153685_01432_gene;locus_tag=GCA000153685_01432;gene=irtA
contig_1	Pyrodigal	CDS	1519781	1522360	.	+	0	ID=GCA000153685_01432;Name=iron ABC transporter ATP-binding protein/permease IrtA;locus_tag=GCA000153685_01432;product=iron ABC transporter ATP-binding protein/permease IrtA;Dbxref=GO:0005524,GO:0005886,GO:0006879,GO:0010106,GO:0015343,GO:0016491,GO:0016887,GO:0033214,GO:0042626,GO:0044847,GO:0071949,GO:0140359;gene=irtA;Parent=GCA000153685_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406958,RefSeq:WP_003406958.1,SO:0001217,UniParc:UPI000013A849,UniRef:UniRef100_P9WQJ9,UniRef:UniRef50_P9WQJ9,UniRef:UniRef90_P9WQJ9;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1522357	1524096	.	+	.	ID=GCA000153685_01433_gene;locus_tag=GCA000153685_01433;gene=irtB
contig_1	Pyrodigal	CDS	1522357	1524096	.	+	0	ID=GCA000153685_01433;Name=iron ABC transporter ATP-binding protein/permease IrtB;locus_tag=GCA000153685_01433;product=iron ABC transporter ATP-binding protein/permease IrtB;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006879,GO:0010106,GO:0015343,GO:0016887,GO:0033214,GO:0042626,GO:0044847,GO:0140359;gene=irtB;Parent=GCA000153685_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900322,RefSeq:WP_003900322.1,SO:0001217,UniParc:UPI000013A84E,UniRef:UniRef100_P9WQJ7,UniRef:UniRef50_P9WQJ7,UniRef:UniRef90_P9WQJ7;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1524225	1524968	.	+	.	ID=GCA000153685_01434_gene;locus_tag=GCA000153685_01434;gene=fabG
contig_1	Pyrodigal	CDS	1524225	1524968	.	+	0	ID=GCA000153685_01434;Name=3-oxoacyl-ACP reductase FabG;locus_tag=GCA000153685_01434;product=3-oxoacyl-ACP reductase FabG;Dbxref=GO:0004316,GO:0006633,GO:0016616,GO:0030497,GO:0051287;gene=fabG;Parent=GCA000153685_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406963.1,SO:0001217,UniParc:UPI000013A855,UniRef:UniRef100_P9WGR9,UniRef:UniRef50_P9WGR9,UniRef:UniRef90_P9WGR9;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1525022	1525294	.	+	.	ID=GCA000153685_01435_gene;locus_tag=GCA000153685_01435
contig_1	Pyrodigal	CDS	1525022	1525294	.	+	0	ID=GCA000153685_01435;Name=putative protein Mb1386;locus_tag=GCA000153685_01435;product=putative protein Mb1386;Parent=GCA000153685_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003918231.1,SO:0001217,UniParc:UPI0001B4694A,UniRef:UniRef100_P9WM17,UniRef:UniRef50_P9WM17,UniRef:UniRef90_P9WM17
contig_1	Pyrodigal	gene	1525497	1525868	.	+	.	ID=GCA000153685_01436_gene;locus_tag=GCA000153685_01436
contig_1	Pyrodigal	CDS	1525497	1525868	.	+	0	ID=GCA000153685_01436;Name=putative protein Rv1352;locus_tag=GCA000153685_01436;product=putative protein Rv1352;Dbxref=GO:0005576;Parent=GCA000153685_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406967.1,SO:0001217,UniParc:UPI000004A4B6,UniRef:UniRef100_P9WM15,UniRef:UniRef50_P9WM15,UniRef:UniRef90_P9WM15
contig_1	Pyrodigal	gene	1525934	1526521	.	-	.	ID=GCA000153685_01437_gene;locus_tag=GCA000153685_01437
contig_1	Pyrodigal	CDS	1525934	1526521	.	-	0	ID=GCA000153685_01437;Name=putative HTH-type transcriptional regulator Mb1388c;locus_tag=GCA000153685_01437;product=putative HTH-type transcriptional regulator Mb1388c;Dbxref=GO:0000976,GO:0003700,GO:0045892;Parent=GCA000153685_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001277F9F,UniRef:UniRef100_P9WMD3,UniRef:UniRef50_P9WMD3,UniRef:UniRef90_P9WMD3
contig_1	Pyrodigal	gene	1527275	1528141	.	-	.	ID=GCA000153685_01438_gene;locus_tag=GCA000153685_01438
contig_1	Pyrodigal	CDS	1527275	1528141	.	-	0	ID=GCA000153685_01438;Name=putative protein Rv1357c;locus_tag=GCA000153685_01438;product=putative protein Rv1357c;Dbxref=GO:0005886,GO:0009214,GO:0051701,GO:0071111;Parent=GCA000153685_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911504.1,SO:0001217,UniParc:UPI00005EE527,UniRef:UniRef100_A0A085E4A4,UniRef:UniRef50_P9WM07,UniRef:UniRef90_P9WM07
contig_1	Pyrodigal	gene	1528218	1528358	.	-	.	ID=GCA000153685_01439_gene;locus_tag=GCA000153685_01439
contig_1	Pyrodigal	CDS	1528218	1528358	.	-	0	ID=GCA000153685_01439;Name=hypothetical protein;locus_tag=GCA000153685_01439;product=hypothetical protein;Parent=GCA000153685_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003406990.1,SO:0001217,UniParc:UPI00000D2C16,UniRef:UniRef100_A0A0H3L865,UniRef:UniRef50_A0A0H3L865,UniRef:UniRef90_A0A0H3L865
contig_1	Pyrodigal	gene	1528699	1532073	.	+	.	ID=GCA000153685_01440_gene;locus_tag=GCA000153685_01440;gene=luxR
contig_1	Pyrodigal	CDS	1528699	1532073	.	+	0	ID=GCA000153685_01440;Name=LuxR family transcriptional regulator;locus_tag=GCA000153685_01440;product=LuxR family transcriptional regulator;gene=luxR;Parent=GCA000153685_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000309EBE2,UniRef:UniRef100_A0A0E9ARM1,UniRef:UniRef50_P9WMG1,UniRef:UniRef90_A5U258
contig_1	Pyrodigal	gene	1532302	1532907	.	+	.	ID=GCA000153685_01441_gene;locus_tag=GCA000153685_01441
contig_1	Pyrodigal	CDS	1532302	1532907	.	+	0	ID=GCA000153685_01441;Name=putative protein Rv1359;locus_tag=GCA000153685_01441;product=putative protein Rv1359;Parent=GCA000153685_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003918232.1,SO:0001217,UniParc:UPI0002178785,UniRef:UniRef100_P9WM05,UniRef:UniRef50_P9WM05,UniRef:UniRef90_P9WM05
contig_1	Pyrodigal	gene	1532955	1533191	.	-	.	ID=GCA000153685_01442_gene;locus_tag=GCA000153685_01442
contig_1	Pyrodigal	CDS	1532955	1533191	.	-	0	ID=GCA000153685_01442;Name=hypothetical protein;locus_tag=GCA000153685_01442;product=hypothetical protein;Parent=GCA000153685_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407054.1,SO:0001217,UniParc:UPI00000D2C18,UniRef:UniRef100_Q8VK32,UniRef:UniRef50_Q8VK32,UniRef:UniRef90_Q8VK32
contig_1	Pyrodigal	gene	1533330	1534352	.	+	.	ID=GCA000153685_01443_gene;locus_tag=GCA000153685_01443
contig_1	Pyrodigal	CDS	1533330	1534352	.	+	0	ID=GCA000153685_01443;Name=putative protein Rv1360;locus_tag=GCA000153685_01443;product=putative protein Rv1360;Dbxref=GO:0016705;Parent=GCA000153685_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898842.1,SO:0001217,UniParc:UPI000013A874,UniRef:UniRef100_P9WM03,UniRef:UniRef50_P9WM03,UniRef:UniRef90_P9WM03
contig_1	Pyrodigal	gene	1534425	1535615	.	-	.	ID=GCA000153685_01444_gene;locus_tag=GCA000153685_01444;gene=pPE19
contig_1	Pyrodigal	CDS	1534425	1535615	.	-	0	ID=GCA000153685_01444;Name=putative PPE family protein PPE19;locus_tag=GCA000153685_01444;product=putative PPE family protein PPE19;Dbxref=GO:0052572;gene=pPE19;Parent=GCA000153685_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456244.1,SO:0001217,UniParc:UPI000169A480,UniRef:UniRef100_A0A0H3L872,UniRef:UniRef50_P9WI25,UniRef:UniRef90_P9WI25
contig_1	Pyrodigal	gene	1535930	1536592	.	-	.	ID=GCA000153685_01445_gene;locus_tag=GCA000153685_01445
contig_1	Pyrodigal	CDS	1535930	1536592	.	-	0	ID=GCA000153685_01445;Name=putative protein Rv1362c;locus_tag=GCA000153685_01445;product=putative protein Rv1362c;Dbxref=GO:0005886;Parent=GCA000153685_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003407152.1,SO:0001217,UniParc:UPI000013A878,UniRef:UniRef100_P9WM01,UniRef:UniRef50_P9WM01,UniRef:UniRef90_P9WM01
contig_1	Pyrodigal	gene	1536589	1537374	.	-	.	ID=GCA000153685_01446_gene;locus_tag=GCA000153685_01446
contig_1	Pyrodigal	CDS	1536589	1537374	.	-	0	ID=GCA000153685_01446;Name=putative protein Rv1363c;locus_tag=GCA000153685_01446;product=putative protein Rv1363c;Dbxref=GO:0016020;Parent=GCA000153685_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003407157.1,SO:0001217,UniParc:UPI000013A87F,UniRef:UniRef100_P9WLZ9,UniRef:UniRef50_P9WLZ9,UniRef:UniRef90_P9WLZ9
contig_1	Pyrodigal	gene	1537665	1539626	.	-	.	ID=GCA000153685_01447_gene;locus_tag=GCA000153685_01447
contig_1	Pyrodigal	CDS	1537665	1539626	.	-	0	ID=GCA000153685_01447;Name=sigma-F factor regulator;locus_tag=GCA000153685_01447;product=sigma-F factor regulator;Dbxref=GO:0000287,GO:0004035,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0006355,GO:0016791,GO:0017018,GO:0030145,GO:0033192,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042802,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0072354,GO:0072371,GO:0072518,GO:0140791,GO:0140823,GO:0140855,GO:0140857,GO:0180004,GO:0180005,GO:0180006,GO:0180007,GO:0180008,GO:1990244,GO:1990439;Parent=GCA000153685_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003916806,RefSeq:WP_003407159.1,SO:0001217,UniParc:UPI00005EE52B,UniRef:UniRef100_P9WLZ6,UniRef:UniRef50_P9WLZ7,UniRef:UniRef90_P9WLZ7
contig_1	Pyrodigal	gene	1539765	1540151	.	-	.	ID=GCA000153685_01448_gene;locus_tag=GCA000153685_01448;gene=rsfA
contig_1	Pyrodigal	CDS	1539765	1540151	.	-	0	ID=GCA000153685_01448;Name=anti-sigma-F factor antagonist RsfA;locus_tag=GCA000153685_01448;product=anti-sigma-F factor antagonist RsfA;Dbxref=GO:0006355,GO:0043856;gene=rsfA;Parent=GCA000153685_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898845,RefSeq:WP_003898845.1,SO:0001217,UniParc:UPI000013A885,UniRef:UniRef100_P9WGE3,UniRef:UniRef50_P9WGE3,UniRef:UniRef90_P9WGE3
contig_1	Pyrodigal	gene	1540402	1541193	.	+	.	ID=GCA000153685_01449_gene;locus_tag=GCA000153685_01449
contig_1	Pyrodigal	CDS	1540402	1541193	.	+	0	ID=GCA000153685_01449;Name=putative protein Mb1401;locus_tag=GCA000153685_01449;product=putative protein Mb1401;Dbxref=GO:0015969;Parent=GCA000153685_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001901ED4,UniRef:UniRef100_A0A0H3L876,UniRef:UniRef50_P9WLZ5,UniRef:UniRef90_P9WLZ5
contig_1	Pyrodigal	gene	1541195	1541422	.	+	.	ID=GCA000153685_01450_gene;locus_tag=GCA000153685_01450
contig_1	Pyrodigal	CDS	1541195	1541422	.	+	0	ID=GCA000153685_01450;Name=Conserved protein;locus_tag=GCA000153685_01450;product=Conserved protein;Parent=GCA000153685_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002FCEED9,UniRef:UniRef100_A0A0E8UY30,UniRef:UniRef50_V5QQR7,UniRef:UniRef90_V5QQR7
contig_1	Pyrodigal	gene	1541494	1542699	.	-	.	ID=GCA000153685_01451_gene;locus_tag=GCA000153685_01451
contig_1	Pyrodigal	CDS	1541494	1542699	.	-	0	ID=GCA000153685_01451;Name=Protein Rv1367c;locus_tag=GCA000153685_01451;product=Protein Rv1367c;Dbxref=GO:0005886;Parent=GCA000153685_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898846.1,SO:0001217,UniParc:UPI0000165022,UniRef:UniRef100_P9WLZ3,UniRef:UniRef50_P9WLZ3,UniRef:UniRef90_P9WLZ3
contig_1	Pyrodigal	gene	1543002	1543787	.	+	.	ID=GCA000153685_01452_gene;locus_tag=GCA000153685_01452;gene=lprF
contig_1	Pyrodigal	CDS	1543002	1543787	.	+	0	ID=GCA000153685_01452;Name=lipoprotein LprF;locus_tag=GCA000153685_01452;product=lipoprotein LprF;Dbxref=GO:0005576,GO:0005886,GO:0006869,GO:0008289,GO:0009274;gene=lprF;Parent=GCA000153685_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407180,KEGG:K14954,RefSeq:WP_003407180.1,SO:0001217,UniParc:UPI000012E884,UniRef:UniRef100_P9WK47,UniRef:UniRef50_P9WK47,UniRef:UniRef90_P9WK47
contig_1	Pyrodigal	gene	1543983	1545452	.	+	.	ID=GCA000153685_01453_gene;locus_tag=GCA000153685_01453
contig_1	Pyrodigal	CDS	1543983	1545452	.	+	0	ID=GCA000153685_01453;Name=Cytochrome b5 heme-binding domain-containing protein;locus_tag=GCA000153685_01453;product=Cytochrome b5 heme-binding domain-containing protein;Parent=GCA000153685_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900326.1,SO:0001217,UniParc:UPI00000C14EA,UniRef:UniRef100_A5U273,UniRef:UniRef50_Q5YPV9,UniRef:UniRef90_A0A829C941
contig_1	Pyrodigal	gene	1545449	1546630	.	+	.	ID=GCA000153685_01454_gene;locus_tag=GCA000153685_01454;gene=pks18
contig_1	Pyrodigal	CDS	1545449	1546630	.	+	0	ID=GCA000153685_01454;Name=Alpha-pyrone synthesis polyketide synthase-like Pks18;locus_tag=GCA000153685_01454;product=Alpha-pyrone synthesis polyketide synthase-like Pks18;Dbxref=GO:0006633,GO:0009715,GO:0016747,GO:0030639;gene=pks18;Parent=GCA000153685_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407185.1,SO:0001217,UniParc:UPI00000D5E86,UniRef:UniRef100_P9WPF1,UniRef:UniRef50_P9WPF1,UniRef:UniRef90_P9WPF1;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1546636	1547616	.	+	.	ID=GCA000153685_01455_gene;locus_tag=GCA000153685_01455
contig_1	Pyrodigal	CDS	1546636	1547616	.	+	0	ID=GCA000153685_01455;Name=glycolipid sulfotransferase;locus_tag=GCA000153685_01455;product=glycolipid sulfotransferase;Dbxref=GO:0005737,GO:0008146,GO:0046506,GO:0051923;Parent=GCA000153685_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898849,RefSeq:WP_003898849.1,SO:0001217,UniParc:UPI00000C14AA,UniRef:UniRef100_P9WGB9,UniRef:UniRef50_P9WGB9,UniRef:UniRef90_P9WGB9;ec_number=2.8.2.-
contig_1	Pyrodigal	gene	1548456	1549775	.	+	.	ID=GCA000153685_01456_gene;locus_tag=GCA000153685_01456
contig_1	Pyrodigal	CDS	1548456	1549775	.	+	0	ID=GCA000153685_01456;Name=putative protein Rv1375;locus_tag=GCA000153685_01456;product=putative protein Rv1375;Parent=GCA000153685_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898850.1,SO:0001217,UniParc:UPI000013A8A9,UniRef:UniRef100_P9WF27,UniRef:UniRef50_P9WF27,UniRef:UniRef90_P9WF27
contig_1	Pyrodigal	gene	1549772	1551265	.	+	.	ID=GCA000153685_01457_gene;locus_tag=GCA000153685_01457
contig_1	Pyrodigal	CDS	1549772	1551265	.	+	0	ID=GCA000153685_01457;Name=TfuA-like core domain-containing protein;locus_tag=GCA000153685_01457;product=TfuA-like core domain-containing protein;Parent=GCA000153685_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900327.1,SO:0001217,UniParc:UPI00000D107F,UniRef:UniRef100_P71804,UniRef:UniRef50_P71804,UniRef:UniRef90_P71804
contig_1	Pyrodigal	gene	1551203	1551883	.	-	.	ID=GCA000153685_01458_gene;locus_tag=GCA000153685_01458
contig_1	Pyrodigal	CDS	1551203	1551883	.	-	0	ID=GCA000153685_01458;Name=Methyltransferase domain-containing protein;locus_tag=GCA000153685_01458;product=Methyltransferase domain-containing protein;Parent=GCA000153685_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBD4,UniRef:UniRef100_P71805,UniRef:UniRef50_R4MG06,UniRef:UniRef90_R4MG06
contig_1	Pyrodigal	gene	1551852	1553141	.	-	.	ID=GCA000153685_01459_gene;locus_tag=GCA000153685_01459
contig_1	Pyrodigal	CDS	1551852	1553141	.	-	0	ID=GCA000153685_01459;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_01459;product=HNH nuclease domain-containing protein;Parent=GCA000153685_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911527.1,SO:0001217,UniParc:UPI00005EE533,UniRef:UniRef100_A0A1R3XYK4,UniRef:UniRef50_A0A498QMZ6,UniRef:UniRef90_P71806
contig_1	Pyrodigal	gene	1553278	1553859	.	+	.	ID=GCA000153685_01460_gene;locus_tag=GCA000153685_01460;gene=pyrR
contig_1	Pyrodigal	CDS	1553278	1553859	.	+	0	ID=GCA000153685_01460;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA000153685_01460;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0004845,GO:0006355,GO:0009116,GO:0009274;gene=pyrR;Parent=GCA000153685_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02825,RefSeq:WP_003407196.1,SO:0001217,UniParc:UPI0000132E0E,UniRef:UniRef100_P9WHK3,UniRef:UniRef50_P9WHK3,UniRef:UniRef90_P9WHK3;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	1553856	1554815	.	+	.	ID=GCA000153685_01461_gene;locus_tag=GCA000153685_01461;gene=pyrB
contig_1	Pyrodigal	CDS	1553856	1554815	.	+	0	ID=GCA000153685_01461;Name=aspartate carbamoyltransferase catalytic subunit;locus_tag=GCA000153685_01461;product=aspartate carbamoyltransferase catalytic subunit;Dbxref=GO:0004070,GO:0005829,GO:0006207,GO:0006520,GO:0016597,GO:0044205;gene=pyrB;Parent=GCA000153685_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407200.1,SO:0001217,UniParc:UPI0000132C37,UniRef:UniRef100_P9WIT7,UniRef:UniRef50_P9WIT7,UniRef:UniRef90_P9WIT7;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	1554790	1555206	.	+	.	ID=GCA000153685_01462_gene;locus_tag=GCA000153685_01462
contig_1	Pyrodigal	CDS	1554790	1555206	.	+	0	ID=GCA000153685_01462;Name=Amidohydrolase family protein;locus_tag=GCA000153685_01462;product=Amidohydrolase family protein;Parent=GCA000153685_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1V3WF99
contig_1	Pyrodigal	gene	1555212	1556102	.	+	.	ID=GCA000153685_01463_gene;locus_tag=GCA000153685_01463
contig_1	Pyrodigal	CDS	1555212	1556102	.	+	0	ID=GCA000153685_01463;Name=Dihydroorotase;locus_tag=GCA000153685_01463;product=Dihydroorotase;Parent=GCA000153685_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A960GL30
contig_1	Pyrodigal	gene	1556099	1556596	.	+	.	ID=GCA000153685_01464_gene;locus_tag=GCA000153685_01464
contig_1	Pyrodigal	CDS	1556099	1556596	.	+	0	ID=GCA000153685_01464;Name=Export protein;locus_tag=GCA000153685_01464;product=Export protein;Parent=GCA000153685_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898853.1,SO:0001217,UniParc:UPI00000D0F49,UniRef:UniRef100_A5U284,UniRef:UniRef50_Q741H3,UniRef:UniRef90_A5U284
contig_1	Pyrodigal	gene	1556593	1557723	.	+	.	ID=GCA000153685_01465_gene;locus_tag=GCA000153685_01465;gene=carA
contig_1	Pyrodigal	CDS	1556593	1557723	.	+	0	ID=GCA000153685_01465;Name=carbamoyl phosphate synthase small subunit;locus_tag=GCA000153685_01465;product=carbamoyl phosphate synthase small subunit;Dbxref=GO:0004088,GO:0004359,GO:0005524,GO:0005737,GO:0005951,GO:0006207,GO:0006526,GO:0006541,GO:0044205;gene=carA;Parent=GCA000153685_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407208.1,SO:0001217,UniParc:UPI0000126F4C,UniRef:UniRef100_P9WPK5,UniRef:UniRef50_Q9KXR5,UniRef:UniRef90_P9WPK5;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1557723	1558397	.	+	.	ID=GCA000153685_01466_gene;locus_tag=GCA000153685_01466
contig_1	Pyrodigal	CDS	1557723	1558397	.	+	0	ID=GCA000153685_01466;Name=carbamoyl-phosphate synthase (ammonia);locus_tag=GCA000153685_01466;product=carbamoyl-phosphate synthase (ammonia);Parent=GCA000153685_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377E2W3,UniRef:UniRef90_X7YPB9
contig_1	Pyrodigal	gene	1558346	1561069	.	+	.	ID=GCA000153685_01467_gene;locus_tag=GCA000153685_01467;gene=carB
contig_1	Pyrodigal	CDS	1558346	1561069	.	+	0	ID=GCA000153685_01467;Name=carbamoyl-phosphate synthase large subunit;locus_tag=GCA000153685_01467;product=carbamoyl-phosphate synthase large subunit;Dbxref=GO:0005524,GO:0008152,GO:0046872;gene=carB;Parent=GCA000153685_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0K8Q5A0,UniRef:UniRef90_A0A654TBT2;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1561066	1561890	.	+	.	ID=GCA000153685_01468_gene;locus_tag=GCA000153685_01468;gene=pyrF
contig_1	Pyrodigal	CDS	1561066	1561890	.	+	0	ID=GCA000153685_01468;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000153685_01468;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0006207,GO:0006221,GO:0044205;gene=pyrF;Parent=GCA000153685_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407220.1,SO:0001217,UniParc:UPI0000132D1B,UniRef:UniRef100_P9WIU3,UniRef:UniRef50_P9WIU3,UniRef:UniRef90_P9WIU3;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1562085	1562393	.	+	.	ID=GCA000153685_01469_gene;locus_tag=GCA000153685_01469;gene=pE15
contig_1	Pyrodigal	CDS	1562085	1562393	.	+	0	ID=GCA000153685_01469;Name=PE family immunomodulator PE15;locus_tag=GCA000153685_01469;product=PE family immunomodulator PE15;Dbxref=GO:0005576,GO:0009986,GO:0030313;gene=pE15;Parent=GCA000153685_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900330.1,SO:0001217,UniParc:UPI0001277FB9,UniRef:UniRef100_A0A0H3L9C5,UniRef:UniRef50_P9WIH1,UniRef:UniRef90_P9WIH1
contig_1	Pyrodigal	gene	1562390	1564009	.	+	.	ID=GCA000153685_01470_gene;locus_tag=GCA000153685_01470;gene=pPE20
contig_1	Pyrodigal	CDS	1562390	1564009	.	+	0	ID=GCA000153685_01470;Name=putative PPE family protein PPE20;locus_tag=GCA000153685_01470;product=putative PPE family protein PPE20;Dbxref=GO:0005576,GO:0052572;gene=pPE20;Parent=GCA000153685_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407230.1,SO:0001217,UniParc:UPI00000D121E,UniRef:UniRef100_P9WI23,UniRef:UniRef50_P9WI23,UniRef:UniRef90_P9WI23
contig_1	Pyrodigal	gene	1564570	1564887	.	+	.	ID=GCA000153685_01471_gene;locus_tag=GCA000153685_01471;gene=mihF
contig_1	Pyrodigal	CDS	1564570	1564887	.	+	0	ID=GCA000153685_01471;Name=integration host factor MihF;locus_tag=GCA000153685_01471;product=integration host factor MihF;Dbxref=GO:0003677,GO:0005829,GO:0005886,GO:0009274,GO:0030261;gene=mihF;Parent=GCA000153685_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003872557,RefSeq:WP_003407240.1,SO:0001217,UniParc:UPI00005EE534,UniRef:UniRef100_P71658,UniRef:UniRef50_A0QWS8,UniRef:UniRef90_A0QWS8
contig_1	Pyrodigal	gene	1565022	1565648	.	+	.	ID=GCA000153685_01472_gene;locus_tag=GCA000153685_01472;gene=gmk
contig_1	Pyrodigal	CDS	1565022	1565648	.	+	0	ID=GCA000153685_01472;Name=guanylate kinase;locus_tag=GCA000153685_01472;product=guanylate kinase;Dbxref=GO:0000287,GO:0004017,GO:0004385,GO:0005524,GO:0005829,GO:0006163,GO:0019002,GO:0019003;gene=gmk;Parent=GCA000153685_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900331.1,SO:0001217,UniParc:UPI000012DDE9,UniRef:UniRef100_P9WKE9,UniRef:UniRef50_P9WKE9,UniRef:UniRef90_P9WKE9;ec_number=2.7.4.8
contig_1	Pyrodigal	gene	1565714	1566046	.	+	.	ID=GCA000153685_01473_gene;locus_tag=GCA000153685_01473;gene=rpoZ
contig_1	Pyrodigal	CDS	1565714	1566046	.	+	0	ID=GCA000153685_01473;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA000153685_01473;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005829,GO:0006351,GO:0009274;gene=rpoZ;Parent=GCA000153685_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407248.1,SO:0001217,UniParc:UPI00001347FD,UniRef:UniRef100_P9WGY5,UniRef:UniRef50_P9WGY5,UniRef:UniRef90_P9WGY5;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1566062	1567318	.	+	.	ID=GCA000153685_01474_gene;locus_tag=GCA000153685_01474;gene=coaBC
contig_1	Pyrodigal	CDS	1566062	1567318	.	+	0	ID=GCA000153685_01474;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000153685_01474;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0005886,GO:0010181,GO:0015937,GO:0015941,GO:0046872,GO:0071513;gene=coaBC;Parent=GCA000153685_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898859.1,SO:0001217,UniParc:UPI0000129200,UniRef:UniRef100_P9WNZ1,UniRef:UniRef50_P9WNZ1,UniRef:UniRef90_P9WNZ1;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	1567446	1568657	.	+	.	ID=GCA000153685_01475_gene;locus_tag=GCA000153685_01475;gene=metK
contig_1	Pyrodigal	CDS	1567446	1568657	.	+	0	ID=GCA000153685_01475;Name=methionine adenosyltransferase;locus_tag=GCA000153685_01475;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000153685_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_003900333.1,SO:0001217,UniParc:UPI000012EFC5,UniRef:UniRef100_P9WGV1,UniRef:UniRef50_P9WGV1,UniRef:UniRef90_P9WGV1;ec_number=2.5.1.6
contig_1	Pyrodigal	gene	1568730	1570208	.	-	.	ID=GCA000153685_01476_gene;locus_tag=GCA000153685_01476
contig_1	Pyrodigal	CDS	1568730	1570208	.	-	0	ID=GCA000153685_01476;Name=NAD(P)/FAD-dependent oxidoreductase;locus_tag=GCA000153685_01476;product=NAD(P)/FAD-dependent oxidoreductase;Parent=GCA000153685_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407257.1,SO:0001217,UniParc:UPI00000D122B,UniRef:UniRef100_A5U295,UniRef:UniRef50_A0A378T8B4,UniRef:UniRef90_A0AAU0QD15
contig_1	Pyrodigal	gene	1570205	1571590	.	-	.	ID=GCA000153685_01477_gene;locus_tag=GCA000153685_01477;gene=cyp132
contig_1	Pyrodigal	CDS	1570205	1571590	.	-	0	ID=GCA000153685_01477;Name=Putative cytochrome P450 132;locus_tag=GCA000153685_01477;product=Putative cytochrome P450 132;Dbxref=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gene=cyp132;Parent=GCA000153685_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407260.1,SO:0001217,UniParc:UPI0000165029,UniRef:UniRef100_P59954,UniRef:UniRef50_P9WPN3,UniRef:UniRef90_P9WPN3;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	1571668	1572702	.	+	.	ID=GCA000153685_01478_gene;locus_tag=GCA000153685_01478
contig_1	Pyrodigal	CDS	1571668	1572702	.	+	0	ID=GCA000153685_01478;Name=putative HTH-type transcriptional regulator Rv1395;locus_tag=GCA000153685_01478;product=putative HTH-type transcriptional regulator Rv1395;Parent=GCA000153685_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407264.1,SO:0001217,UniParc:UPI000013A8D9,UniRef:UniRef100_P9WMJ1,UniRef:UniRef90_P9WMJ1
contig_1	Pyrodigal	gene	1572748	1573884	.	-	.	ID=GCA000153685_01479_gene;locus_tag=GCA000153685_01479
contig_1	Pyrodigal	CDS	1572748	1573884	.	-	0	ID=GCA000153685_01479;Name=hypothetical protein;locus_tag=GCA000153685_01479;product=hypothetical protein;Parent=GCA000153685_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031070F2,UniRef:UniRef100_A0A1K7NCQ6,UniRef:UniRef50_A0A1K7NCQ6,UniRef:UniRef90_A0A1K7NCQ6
contig_1	Pyrodigal	gene	1573998	1574477	.	-	.	ID=GCA000153685_01480_gene;locus_tag=GCA000153685_01480
contig_1	Pyrodigal	CDS	1573998	1574477	.	-	0	ID=GCA000153685_01480;Name=PE family protein;locus_tag=GCA000153685_01480;product=PE family protein;Parent=GCA000153685_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345066.1,SO:0001217,UniParc:UPI0002A7FF0A,UniRef:UniRef100_A0A1K4YP12,UniRef:UniRef50_A0A0H3M8U0,UniRef:UniRef90_A0A1K4YP12
contig_1	Pyrodigal	gene	1574732	1575133	.	-	.	ID=GCA000153685_01481_gene;locus_tag=GCA000153685_01481;gene=vapC10
contig_1	Pyrodigal	CDS	1574732	1575133	.	-	0	ID=GCA000153685_01481;Name=Ribonuclease VapC10;locus_tag=GCA000153685_01481;product=Ribonuclease VapC10;Dbxref=GO:0000287,GO:0004540,GO:0005886;gene=vapC10;Parent=GCA000153685_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898861.1,SO:0001217,UniParc:UPI00000D122E,UniRef:UniRef100_P9WFA7,UniRef:UniRef50_P9WFA7,UniRef:UniRef90_P9WFA7;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1575130	1575387	.	-	.	ID=GCA000153685_01482_gene;locus_tag=GCA000153685_01482;gene=vapB10
contig_1	Pyrodigal	CDS	1575130	1575387	.	-	0	ID=GCA000153685_01482;Name=putative protein Mb1433c;locus_tag=GCA000153685_01482;product=putative protein Mb1433c;Dbxref=GO:0006355;gene=vapB10;Parent=GCA000153685_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407272.1,SO:0001217,UniParc:UPI000013A8DD,UniRef:UniRef100_P64836,UniRef:UniRef50_P64836,UniRef:UniRef90_P64836
contig_1	Pyrodigal	gene	1575470	1576429	.	-	.	ID=GCA000153685_01483_gene;locus_tag=GCA000153685_01483;gene=nlhH
contig_1	Pyrodigal	CDS	1575470	1576429	.	-	0	ID=GCA000153685_01483;Name=Carboxylesterase NlhH;locus_tag=GCA000153685_01483;product=Carboxylesterase NlhH;Dbxref=GO:0008126,GO:0009056,GO:0034338,GO:0106435;gene=nlhH;Parent=GCA000153685_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407276.1,SO:0001217,UniParc:UPI00000D123D,UniRef:UniRef100_P9WK87,UniRef:UniRef50_P9WK87,UniRef:UniRef90_P9WK87;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	1576454	1577416	.	-	.	ID=GCA000153685_01484_gene;locus_tag=GCA000153685_01484;gene=lipI
contig_1	Pyrodigal	CDS	1576454	1577416	.	-	0	ID=GCA000153685_01484;Name=Esterase LipI;locus_tag=GCA000153685_01484;product=Esterase LipI;Dbxref=GO:0008126,GO:0034338;gene=lipI;Parent=GCA000153685_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407279.1,SO:0001217,UniParc:UPI00000CA923,UniRef:UniRef100_P71668,UniRef:UniRef50_P9WK87,UniRef:UniRef90_P71668;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	1577457	1578152	.	+	.	ID=GCA000153685_01485_gene;locus_tag=GCA000153685_01485
contig_1	Pyrodigal	CDS	1577457	1578152	.	+	0	ID=GCA000153685_01485;Name=Lysoplasmalogenase;locus_tag=GCA000153685_01485;product=Lysoplasmalogenase;Dbxref=GO:0005886,GO:0006629,GO:0016020,GO:0016787;Parent=GCA000153685_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C592AA,UniRef:UniRef100_A0A0H3L9E0,UniRef:UniRef50_P9WG51,UniRef:UniRef90_P9WG51;ec_number=3.3.2.2
contig_1	Pyrodigal	gene	1578233	1580200	.	+	.	ID=GCA000153685_01486_gene;locus_tag=GCA000153685_01486;gene=priA
contig_1	Pyrodigal	CDS	1578233	1580200	.	+	0	ID=GCA000153685_01486;Name=primosomal protein N';locus_tag=GCA000153685_01486;product=primosomal protein N';Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0006268,GO:0006269,GO:0006270,GO:0006302,GO:0006310,GO:0008270,GO:0016787,GO:0043138,GO:1990077;gene=priA;Parent=GCA000153685_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04066,RefSeq:WP_003407285.1,SO:0001217,UniParc:UPI00001321C0,UniRef:UniRef100_P9WMQ9,UniRef:UniRef50_P9WMQ9,UniRef:UniRef90_P9WMQ9;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	1580218	1581042	.	-	.	ID=GCA000153685_01487_gene;locus_tag=GCA000153685_01487
contig_1	Pyrodigal	CDS	1580218	1581042	.	-	0	ID=GCA000153685_01487;Name=putative protein Rv1403c;locus_tag=GCA000153685_01487;product=putative protein Rv1403c;Dbxref=GO:0008168;Parent=GCA000153685_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407292.1,SO:0001217,UniParc:UPI000013AA5B,UniRef:UniRef100_P9WLY9,UniRef:UniRef50_P9WLY7,UniRef:UniRef90_P9WLY9
contig_1	Pyrodigal	gene	1581166	1581693	.	+	.	ID=GCA000153685_01488_gene;locus_tag=GCA000153685_01488
contig_1	Pyrodigal	CDS	1581166	1581693	.	+	0	ID=GCA000153685_01488;Name=Transcriptional regulator;locus_tag=GCA000153685_01488;product=Transcriptional regulator;Parent=GCA000153685_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016502D,UniRef:UniRef100_Q7D8H1,UniRef:UniRef50_A0A0F0GLG5,UniRef:UniRef90_A0A0H3L8T1
contig_1	Pyrodigal	gene	1581765	1582589	.	-	.	ID=GCA000153685_01489_gene;locus_tag=GCA000153685_01489
contig_1	Pyrodigal	CDS	1581765	1582589	.	-	0	ID=GCA000153685_01489;Name=virulence-associated methyltransferase;locus_tag=GCA000153685_01489;product=virulence-associated methyltransferase;Dbxref=GO:0008168,GO:0008757;Parent=GCA000153685_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407297,RefSeq:WP_003407297.1,SO:0001217,UniParc:UPI000013AA63,UniRef:UniRef100_P9WLY7,UniRef:UniRef50_P9WLY7,UniRef:UniRef90_P9WLY7
contig_1	Pyrodigal	gene	1582786	1583724	.	+	.	ID=GCA000153685_01490_gene;locus_tag=GCA000153685_01490;gene=fmt
contig_1	Pyrodigal	CDS	1582786	1583724	.	+	0	ID=GCA000153685_01490;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000153685_01490;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000153685_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900336.1,SO:0001217,UniParc:UPI000012AAF2,UniRef:UniRef100_P9WND3,UniRef:UniRef50_P9WND3,UniRef:UniRef90_P9WND3;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	1583721	1585094	.	+	.	ID=GCA000153685_01491_gene;locus_tag=GCA000153685_01491
contig_1	Pyrodigal	CDS	1583721	1585094	.	+	0	ID=GCA000153685_01491;Name=Putative methyltransferase Rv1407;locus_tag=GCA000153685_01491;product=Putative methyltransferase Rv1407;Dbxref=GO:0001510,GO:0003723,GO:0006355,GO:0008173,GO:0009274;Parent=GCA000153685_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898865.1,SO:0001217,UniParc:UPI000013AA6C,UniRef:UniRef100_P9WGX3,UniRef:UniRef50_P9WGX3,UniRef:UniRef90_P9WGX3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1585128	1585817	.	+	.	ID=GCA000153685_01492_gene;locus_tag=GCA000153685_01492;gene=rpe
contig_1	Pyrodigal	CDS	1585128	1585817	.	+	0	ID=GCA000153685_01492;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA000153685_01492;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0005829,GO:0005975,GO:0006098,GO:0009052,GO:0019323,GO:0046872;gene=rpe;Parent=GCA000153685_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000134624,UniRef:UniRef100_P9WI51,UniRef:UniRef50_P9WI51,UniRef:UniRef90_P9WI51;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	1585814	1586833	.	+	.	ID=GCA000153685_01493_gene;locus_tag=GCA000153685_01493;gene=ribD
contig_1	Pyrodigal	CDS	1585814	1586833	.	+	0	ID=GCA000153685_01493;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000153685_01493;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0005829,GO:0005886,GO:0008270,GO:0008703,GO:0008835,GO:0009231;gene=ribD;Parent=GCA000153685_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11752,RefSeq:WP_003898867.1,SO:0001217,UniParc:UPI00001338DA,UniRef:UniRef100_P9WPH1,UniRef:UniRef50_P9WPH1,UniRef:UniRef90_P9WPH1;ec_number=3.5.4.26
contig_1	Pyrodigal	gene	1586830	1588386	.	-	.	ID=GCA000153685_01494_gene;locus_tag=GCA000153685_01494
contig_1	Pyrodigal	CDS	1586830	1588386	.	-	0	ID=GCA000153685_01494;Name=aminoglycoside/tetracycline transporter;locus_tag=GCA000153685_01494;product=aminoglycoside/tetracycline transporter;Dbxref=GO:0005829,GO:0005886,GO:0008289,GO:0015562,GO:0016853,GO:0017089,GO:0022857,GO:0046677,GO:0052170,GO:0055085;Parent=GCA000153685_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407310,KEGG:K27247,RefSeq:WP_003407310.1,SO:0001217,UniParc:UPI00000D1204,UniRef:UniRef100_P9WJY3,UniRef:UniRef50_P9WJY3,UniRef:UniRef90_P9WJY3
contig_1	Pyrodigal	gene	1588392	1589111	.	-	.	ID=GCA000153685_01495_gene;locus_tag=GCA000153685_01495;gene=lprG
contig_1	Pyrodigal	CDS	1588392	1589111	.	-	0	ID=GCA000153685_01495;Name=lipoarabinomannan carrier protein LprG;locus_tag=GCA000153685_01495;product=lipoarabinomannan carrier protein LprG;Dbxref=GO:0005829,GO:0005886,GO:0006869,GO:0009274,GO:0009986,GO:0035091,GO:0046677,GO:0051861,GO:0097691;gene=lprG;Parent=GCA000153685_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407315,KEGG:K14954,SO:0001217,UniParc:UPI000016502E,UniRef:UniRef100_P9WK45,UniRef:UniRef50_P9WK45,UniRef:UniRef90_P9WK45
contig_1	Pyrodigal	gene	1589220	1589792	.	+	.	ID=GCA000153685_01496_gene;locus_tag=GCA000153685_01496;gene=ribE
contig_1	Pyrodigal	CDS	1589220	1589792	.	+	0	ID=GCA000153685_01496;Name=riboflavin synthase;locus_tag=GCA000153685_01496;product=riboflavin synthase;Dbxref=GO:0004746,GO:0009231;gene=ribE;Parent=GCA000153685_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00793,SO:0001217,UniParc:UPI0003296650,UniRef:UniRef100_A0A0E8JU35,UniRef:UniRef50_P9WK35,UniRef:UniRef90_P9WK35;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1590006	1590521	.	+	.	ID=GCA000153685_01497_gene;locus_tag=GCA000153685_01497
contig_1	Pyrodigal	CDS	1590006	1590521	.	+	0	ID=GCA000153685_01497;Name=putative protein Rv1413;locus_tag=GCA000153685_01497;product=putative protein Rv1413;Dbxref=GO:0008721,GO:0036088;Parent=GCA000153685_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900337.1,SO:0001217,UniParc:UPI000013AA86,UniRef:UniRef100_P9WLY5,UniRef:UniRef50_P9WLY5,UniRef:UniRef90_P9WLY5
contig_1	Pyrodigal	gene	1590511	1590912	.	+	.	ID=GCA000153685_01498_gene;locus_tag=GCA000153685_01498
contig_1	Pyrodigal	CDS	1590511	1590912	.	+	0	ID=GCA000153685_01498;Name=putative protein Rv1414;locus_tag=GCA000153685_01498;product=putative protein Rv1414;Dbxref=GO:0008721,GO:0036088;Parent=GCA000153685_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407330.1,SO:0001217,UniParc:UPI000013AA8A,UniRef:UniRef100_P9WLY3,UniRef:UniRef50_P9WLY3,UniRef:UniRef90_P9WLY3
contig_1	Pyrodigal	gene	1591017	1592294	.	+	.	ID=GCA000153685_01499_gene;locus_tag=GCA000153685_01499;gene=ribBA
contig_1	Pyrodigal	CDS	1591017	1592294	.	+	0	ID=GCA000153685_01499;Name=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;locus_tag=GCA000153685_01499;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;Dbxref=GO:0000287,GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0008686,GO:0009231,GO:0030145;gene=ribBA;Parent=GCA000153685_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,KEGG:K14652,RefSeq:WP_003407334.1,SO:0001217,UniParc:UPI000012B2D3,UniRef:UniRef100_P9WHF1,UniRef:UniRef50_P9WHF1,UniRef:UniRef90_P9WHF1;ec_number=4.1.99.12
contig_1	Pyrodigal	gene	1592291	1592773	.	+	.	ID=GCA000153685_01500_gene;locus_tag=GCA000153685_01500;gene=ribH
contig_1	Pyrodigal	CDS	1592291	1592773	.	+	0	ID=GCA000153685_01500;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000153685_01500;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005829,GO:0009231,GO:0009349;gene=ribH;Parent=GCA000153685_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00794,RefSeq:WP_003898872.1,SO:0001217,UniParc:UPI00001339BB,UniRef:UniRef100_P9WHE9,UniRef:UniRef50_P9WHE9,UniRef:UniRef90_P9WHE9;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	1592770	1593234	.	+	.	ID=GCA000153685_01501_gene;locus_tag=GCA000153685_01501
contig_1	Pyrodigal	CDS	1592770	1593234	.	+	0	ID=GCA000153685_01501;Name=putative protein Mb1452;locus_tag=GCA000153685_01501;product=putative protein Mb1452;Dbxref=GO:0005886;Parent=GCA000153685_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407340.1,SO:0001217,UniParc:UPI000013AA92,UniRef:UniRef100_P9WLY1,UniRef:UniRef50_P9WLY1,UniRef:UniRef90_P9WLY1
contig_1	Pyrodigal	gene	1593316	1593945	.	+	.	ID=GCA000153685_01502_gene;locus_tag=GCA000153685_01502;gene=lprH
contig_1	Pyrodigal	CDS	1593316	1593945	.	+	0	ID=GCA000153685_01502;Name=Putative lipoprotein LprH;locus_tag=GCA000153685_01502;product=Putative lipoprotein LprH;Dbxref=GO:0005886;gene=lprH;Parent=GCA000153685_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE53D,UniRef:UniRef100_A0A0H3L8C9,UniRef:UniRef50_P9WK43,UniRef:UniRef90_P9WK43
contig_1	Pyrodigal	gene	1594125	1594598	.	+	.	ID=GCA000153685_01503_gene;locus_tag=GCA000153685_01503
contig_1	Pyrodigal	CDS	1594125	1594598	.	+	0	ID=GCA000153685_01503;Name=lectin;locus_tag=GCA000153685_01503;product=lectin;Dbxref=GO:0016020,GO:0030246;Parent=GCA000153685_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407345,RefSeq:WP_003407345.1,SO:0001217,UniParc:UPI000013AA9C,UniRef:UniRef100_P9WLX9,UniRef:UniRef50_P9WLX9,UniRef:UniRef90_P9WLX9
contig_1	Pyrodigal	gene	1594719	1596602	.	+	.	ID=GCA000153685_01504_gene;locus_tag=GCA000153685_01504;gene=uvrC
contig_1	Pyrodigal	CDS	1594719	1596602	.	+	0	ID=GCA000153685_01504;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000153685_01504;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005515,GO:0006289,GO:0009380,GO:0009381;gene=uvrC;Parent=GCA000153685_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03703,SO:0001217,UniParc:UPI00005EE53E,UniRef:UniRef100_A0A0E8TZ63,UniRef:UniRef50_A0A7K0C4W6,UniRef:UniRef90_A0A0E8TZ63;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	1596599	1597504	.	+	.	ID=GCA000153685_01505_gene;locus_tag=GCA000153685_01505;gene=rapZ
contig_1	Pyrodigal	CDS	1596599	1597504	.	+	0	ID=GCA000153685_01505;Name=RNase adapter RapZ;locus_tag=GCA000153685_01505;product=RNase adapter RapZ;Dbxref=GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000153685_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06958,RefSeq:WP_003898873.1,SO:0001217,UniParc:UPI000013AAAB,UniRef:UniRef100_P9WFQ3,UniRef:UniRef50_A1T8K5,UniRef:UniRef90_P9WFQ3
contig_1	Pyrodigal	gene	1597501	1598529	.	+	.	ID=GCA000153685_01506_gene;locus_tag=GCA000153685_01506;gene=cuvA
contig_1	Pyrodigal	CDS	1597501	1598529	.	+	0	ID=GCA000153685_01506;Name=carbon utilization/virulence protein CuvA;locus_tag=GCA000153685_01506;product=carbon utilization/virulence protein CuvA;Dbxref=GO:0005737,GO:0008360,GO:0043743;gene=cuvA;Parent=GCA000153685_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407352,RefSeq:WP_003407352.1,SO:0001217,UniParc:UPI000013AAAD,UniRef:UniRef100_P9WMU5,UniRef:UniRef50_P9WMU5,UniRef:UniRef90_P9WMU5
contig_1	Pyrodigal	gene	1598526	1599503	.	+	.	ID=GCA000153685_01507_gene;locus_tag=GCA000153685_01507;gene=whiA
contig_1	Pyrodigal	CDS	1598526	1599503	.	+	0	ID=GCA000153685_01507;Name=DNA-binding protein WhiA;locus_tag=GCA000153685_01507;product=DNA-binding protein WhiA;Dbxref=GO:0003677,GO:0043937,GO:0051301;gene=whiA;Parent=GCA000153685_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1481,COG:K,RefSeq:WP_003901156.1,SO:0001217,UniParc:UPI00000CCC27,UniRef:UniRef100_P9WF45,UniRef:UniRef50_Q9Z515,UniRef:UniRef90_P9WF45
contig_1	Pyrodigal	gene	1599513	1600121	.	-	.	ID=GCA000153685_01508_gene;locus_tag=GCA000153685_01508
contig_1	Pyrodigal	CDS	1599513	1600121	.	-	0	ID=GCA000153685_01508;Name=Lipoprotein;locus_tag=GCA000153685_01508;product=Lipoprotein;Parent=GCA000153685_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE540,UniRef:UniRef100_A0A0H3L8U7,UniRef:UniRef50_A0A0H3L8U7,UniRef:UniRef90_A0A0H3L8U7
contig_1	Pyrodigal	gene	1600338	1601657	.	+	.	ID=GCA000153685_01509_gene;locus_tag=GCA000153685_01509
contig_1	Pyrodigal	CDS	1600338	1601657	.	+	0	ID=GCA000153685_01509;Name=Putative diacyglycerol O-acyltransferase Rv1425;locus_tag=GCA000153685_01509;product=Putative diacyglycerol O-acyltransferase Rv1425;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0051701,GO:0071731;Parent=GCA000153685_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE541,UniRef:UniRef100_P9WKC1,UniRef:UniRef50_P9WKC1,UniRef:UniRef90_P9WKC1;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	1601679	1602941	.	-	.	ID=GCA000153685_01510_gene;locus_tag=GCA000153685_01510
contig_1	Pyrodigal	CDS	1601679	1602941	.	-	0	ID=GCA000153685_01510;Name=Esterase;locus_tag=GCA000153685_01510;product=Esterase;Parent=GCA000153685_01510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407371.1,SO:0001217,UniParc:UPI00000C1582,UniRef:UniRef100_A5U2C8,UniRef:UniRef50_A0A655I1V3,UniRef:UniRef90_A0A655A994
contig_1	Pyrodigal	gene	1602941	1604548	.	-	.	ID=GCA000153685_01511_gene;locus_tag=GCA000153685_01511;gene=fadD12
contig_1	Pyrodigal	CDS	1602941	1604548	.	-	0	ID=GCA000153685_01511;Name=acyl-CoA ligase FadD12;locus_tag=GCA000153685_01511;product=acyl-CoA ligase FadD12;gene=fadD12;Parent=GCA000153685_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898876.1,SO:0001217,UniParc:UPI00000D5E8D,UniRef:UniRef100_O06831,UniRef:UniRef50_A0A0N7H7R3,UniRef:UniRef90_A0A655AAA1
contig_1	Pyrodigal	gene	1604552	1605379	.	-	.	ID=GCA000153685_01512_gene;locus_tag=GCA000153685_01512
contig_1	Pyrodigal	CDS	1604552	1605379	.	-	0	ID=GCA000153685_01512;Name=Phospholipid/glycerol acyltransferase domain-containing protein;locus_tag=GCA000153685_01512;product=Phospholipid/glycerol acyltransferase domain-containing protein;Parent=GCA000153685_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407374.1,SO:0001217,UniParc:UPI00000D5ED7,UniRef:UniRef100_O06830,UniRef:UniRef50_A0A7I7UMP3,UniRef:UniRef90_O06830
contig_1	Pyrodigal	gene	1605498	1606766	.	+	.	ID=GCA000153685_01513_gene;locus_tag=GCA000153685_01513
contig_1	Pyrodigal	CDS	1605498	1606766	.	+	0	ID=GCA000153685_01513;Name=Regulatory protein;locus_tag=GCA000153685_01513;product=Regulatory protein;Parent=GCA000153685_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407376.1,SO:0001217,UniParc:UPI00000CCB26,UniRef:UniRef100_O06829,UniRef:UniRef50_A0A1A3CTP0,UniRef:UniRef90_Q7D8G6
contig_1	Pyrodigal	gene	1607006	1608592	.	+	.	ID=GCA000153685_01514_gene;locus_tag=GCA000153685_01514;gene=pE16
contig_1	Pyrodigal	CDS	1607006	1608592	.	+	0	ID=GCA000153685_01514;Name=esterase PE16;locus_tag=GCA000153685_01514;product=esterase PE16;Dbxref=GO:0016020,GO:0052689;gene=pE16;Parent=GCA000153685_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407378,RefSeq:WP_003407378.1,SO:0001217,UniParc:UPI00000D5E9F,UniRef:UniRef100_L7N697,UniRef:UniRef50_L7N697,UniRef:UniRef90_L7N697;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	1608703	1610472	.	+	.	ID=GCA000153685_01515_gene;locus_tag=GCA000153685_01515
contig_1	Pyrodigal	CDS	1608703	1610472	.	+	0	ID=GCA000153685_01515;Name=DUF3556 domain-containing protein;locus_tag=GCA000153685_01515;product=DUF3556 domain-containing protein;Parent=GCA000153685_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898877.1,SO:0001217,UniParc:UPI00000CCB25,UniRef:UniRef100_O06827,UniRef:UniRef50_A0A024K095,UniRef:UniRef90_Q7D8G4
contig_1	Pyrodigal	gene	1610469	1611890	.	+	.	ID=GCA000153685_01516_gene;locus_tag=GCA000153685_01516
contig_1	Pyrodigal	CDS	1610469	1611890	.	+	0	ID=GCA000153685_01516;Name=Dehydrogenase;locus_tag=GCA000153685_01516;product=Dehydrogenase;Parent=GCA000153685_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407382.1,SO:0001217,UniParc:UPI00000D601F,UniRef:UniRef100_A5U2D4,UniRef:UniRef50_G7CIJ4,UniRef:UniRef90_A5U2D4
contig_1	Pyrodigal	gene	1612054	1612869	.	+	.	ID=GCA000153685_01517_gene;locus_tag=GCA000153685_01517;gene=ldtMt3
contig_1	Pyrodigal	CDS	1612054	1612869	.	+	0	ID=GCA000153685_01517;Name=L%2CD-transpeptidase LdtMt3;locus_tag=GCA000153685_01517;product=L%2CD-transpeptidase LdtMt3;Dbxref=GO:0008360,GO:0016746,GO:0018104,GO:0071555,GO:0071972;gene=ldtMt3;Parent=GCA000153685_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407384,RefSeq:WP_003407384.1,SO:0001217,UniParc:UPI00000D1053,UniRef:UniRef100_O06825,UniRef:UniRef50_O06825,UniRef:UniRef90_O06825;ec_number=2.3.2.-
contig_1	Pyrodigal	gene	1612876	1613019	.	+	.	ID=GCA000153685_01518_gene;locus_tag=GCA000153685_01518
contig_1	Pyrodigal	CDS	1612876	1613019	.	+	0	ID=GCA000153685_01518;Name=hypothetical protein;locus_tag=GCA000153685_01518;product=hypothetical protein;Parent=GCA000153685_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010924400.1,SO:0001217,UniParc:UPI00000D2C22,UniRef:UniRef100_Q8VK22,UniRef:UniRef50_O06824,UniRef:UniRef90_O06824
contig_1	Pyrodigal	gene	1612968	1613588	.	-	.	ID=GCA000153685_01519_gene;locus_tag=GCA000153685_01519
contig_1	Pyrodigal	CDS	1612968	1613588	.	-	0	ID=GCA000153685_01519;Name=Conserved proline%2Cglycine and valine rich secreted protein;locus_tag=GCA000153685_01519;product=Conserved proline%2Cglycine and valine rich secreted protein;Parent=GCA000153685_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE544,UniRef:UniRef100_A0A0H3L8V7,UniRef:UniRef50_Q73TA7,UniRef:UniRef90_A5U2D7
contig_1	Pyrodigal	gene	1613954	1614973	.	+	.	ID=GCA000153685_01520_gene;locus_tag=GCA000153685_01520;gene=gap
contig_1	Pyrodigal	CDS	1613954	1614973	.	+	0	ID=GCA000153685_01520;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000153685_01520;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000153685_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_003407390.1,SO:0001217,UniParc:UPI000012AEC7,UniRef:UniRef100_P9WN83,UniRef:UniRef50_P9WN83,UniRef:UniRef90_P9WN83;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1614976	1616214	.	+	.	ID=GCA000153685_01521_gene;locus_tag=GCA000153685_01521;gene=pgk
contig_1	Pyrodigal	CDS	1614976	1616214	.	+	0	ID=GCA000153685_01521;Name=Phosphoglycerate kinase;locus_tag=GCA000153685_01521;product=Phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA000153685_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00927,RefSeq:WP_003900339.1,SO:0001217,UniParc:UPI00001317FE,UniRef:UniRef100_P9WID1,UniRef:UniRef50_A0QWW3,UniRef:UniRef90_P9WID1;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	1616211	1616996	.	+	.	ID=GCA000153685_01522_gene;locus_tag=GCA000153685_01522;gene=tpiA
contig_1	Pyrodigal	CDS	1616211	1616996	.	+	0	ID=GCA000153685_01522;Name=triose-phosphate isomerase;locus_tag=GCA000153685_01522;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000153685_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01803,RefSeq:WP_003407398.1,SO:0001217,UniParc:UPI0000137214,UniRef:UniRef100_P9WG43,UniRef:UniRef50_P9WG43,UniRef:UniRef90_P9WG43;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	1617012	1617239	.	-	.	ID=GCA000153685_01523_gene;locus_tag=GCA000153685_01523
contig_1	Pyrodigal	CDS	1617012	1617239	.	-	0	ID=GCA000153685_01523;Name=Transcriptional regulator Rv0078-like C-terminal domain-containing protein;locus_tag=GCA000153685_01523;product=Transcriptional regulator Rv0078-like C-terminal domain-containing protein;Parent=GCA000153685_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407402.1,SO:0001217,UniParc:UPI00005EE545,UniRef:UniRef100_A0A9P2H7K6,UniRef:UniRef50_A0A9P2H7K6,UniRef:UniRef90_A0A9P2H7K6
contig_1	Pyrodigal	gene	1617608	1618027	.	-	.	ID=GCA000153685_01524_gene;locus_tag=GCA000153685_01524
contig_1	Pyrodigal	CDS	1617608	1618027	.	-	0	ID=GCA000153685_01524;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_01524;product=SnoaL-like domain-containing protein;Parent=GCA000153685_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003234A9C,UniRef:UniRef100_O06820,UniRef:UniRef50_O06820,UniRef:UniRef90_O06820
contig_1	Pyrodigal	gene	1618212	1618376	.	+	.	ID=GCA000153685_01525_gene;locus_tag=GCA000153685_01525
contig_1	Pyrodigal	CDS	1618212	1618376	.	+	0	ID=GCA000153685_01525;Name=hypothetical protein;locus_tag=GCA000153685_01525;product=hypothetical protein;Parent=GCA000153685_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D262,UniRef:UniRef100_A0A0E8ULI0,UniRef:UniRef50_A0A0E8ULI0,UniRef:UniRef90_A0A0E8ULI0
contig_1	Pyrodigal	gene	1618364	1618717	.	+	.	ID=GCA000153685_01526_gene;locus_tag=GCA000153685_01526;gene=secG
contig_1	Pyrodigal	CDS	1618364	1618717	.	+	0	ID=GCA000153685_01526;Name=preprotein translocase subunit SecG;locus_tag=GCA000153685_01526;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020;gene=secG;Parent=GCA000153685_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016528E,UniRef:UniRef100_A0A0T9B9D5,UniRef:UniRef50_P9WGN5,UniRef:UniRef90_P9WGN5
contig_1	Pyrodigal	gene	1618856	1620331	.	-	.	ID=GCA000153685_01527_gene;locus_tag=GCA000153685_01527;gene=pE_PGRS26
contig_1	Pyrodigal	CDS	1618856	1620331	.	-	0	ID=GCA000153685_01527;Name=PE-PGRS family protein PE_PGRS26;locus_tag=GCA000153685_01527;product=PE-PGRS family protein PE_PGRS26;Dbxref=GO:0009986;gene=pE_PGRS26;Parent=GCA000153685_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886116.1,SO:0001217,UniParc:UPI00000C158C,UniRef:UniRef100_Q79FP3,UniRef:UniRef50_Q79FP3,UniRef:UniRef90_Q79FP3
contig_1	Pyrodigal	gene	1620438	1622738	.	+	.	ID=GCA000153685_01528_gene;locus_tag=GCA000153685_01528;gene=bisC
contig_1	Pyrodigal	CDS	1620438	1622738	.	+	0	ID=GCA000153685_01528;Name=Biotin sulfoxide reductase BisC;locus_tag=GCA000153685_01528;product=Biotin sulfoxide reductase BisC;gene=bisC;Parent=GCA000153685_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08351,RefSeq:WP_003407419.1,SO:0001217,UniParc:UPI00000D114A,UniRef:UniRef100_A5U2E4,UniRef:UniRef50_A0A143Q6Q9,UniRef:UniRef90_A5U2E4;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1622854	1623339	.	-	.	ID=GCA000153685_01529_gene;locus_tag=GCA000153685_01529
contig_1	Pyrodigal	CDS	1622854	1623339	.	-	0	ID=GCA000153685_01529;Name=Ligand-binding SRPBCC domain-containing protein;locus_tag=GCA000153685_01529;product=Ligand-binding SRPBCC domain-containing protein;Parent=GCA000153685_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407422.1,SO:0001217,UniParc:UPI00000D0FE4,UniRef:UniRef100_O06816,UniRef:UniRef50_A0A7W8CFB2,UniRef:UniRef90_O06816
contig_1	Pyrodigal	gene	1623415	1623654	.	+	.	ID=GCA000153685_01530_gene;locus_tag=GCA000153685_01530
contig_1	Pyrodigal	CDS	1623415	1623654	.	+	0	ID=GCA000153685_01530;Name=Transcriptional regulator;locus_tag=GCA000153685_01530;product=Transcriptional regulator;Parent=GCA000153685_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456255.1,SO:0001217,UniParc:UPI000169A585,UniRef:UniRef100_A0A0H3LCP0,UniRef:UniRef50_A0A0H3LCP0,UniRef:UniRef90_A0A0H3LCP0
contig_1	Pyrodigal	gene	1623771	1623884	.	-	.	ID=GCA000153685_01531_gene;locus_tag=GCA000153685_01531
contig_1	Pyrodigal	CDS	1623771	1623884	.	-	0	ID=GCA000153685_01531;Name=Integral membrane protein;locus_tag=GCA000153685_01531;product=Integral membrane protein;Parent=GCA000153685_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009937558.1,SO:0001217,UniParc:UPI0001B44DA6,UniRef:UniRef100_A0A0H3L9I4,UniRef:UniRef50_A0A0H3L9I4,UniRef:UniRef90_A0A0H3L9I4
contig_1	Pyrodigal	gene	1623934	1624344	.	-	.	ID=GCA000153685_01532_gene;locus_tag=GCA000153685_01532
contig_1	Pyrodigal	CDS	1623934	1624344	.	-	0	ID=GCA000153685_01532;Name=ATPase;locus_tag=GCA000153685_01532;product=ATPase;Parent=GCA000153685_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898881.1,SO:0001217,UniParc:UPI00000D11D6,UniRef:UniRef100_O06815,UniRef:UniRef50_O06815,UniRef:UniRef90_O06815
contig_1	Pyrodigal	gene	1624361	1625104	.	-	.	ID=GCA000153685_01533_gene;locus_tag=GCA000153685_01533;gene=pgl
contig_1	Pyrodigal	CDS	1624361	1625104	.	-	0	ID=GCA000153685_01533;Name=6-phosphogluconolactonase;locus_tag=GCA000153685_01533;product=6-phosphogluconolactonase;Dbxref=GO:0005829,GO:0005886,GO:0005975,GO:0009051,GO:0017057;gene=pgl;Parent=GCA000153685_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407433.1,SO:0001217,UniParc:UPI0000124F8C,UniRef:UniRef100_P9WQP5,UniRef:UniRef50_P9WQP5,UniRef:UniRef90_P9WQP5;ec_number=3.1.1.31
contig_1	Pyrodigal	gene	1625101	1626012	.	-	.	ID=GCA000153685_01534_gene;locus_tag=GCA000153685_01534;gene=opcA
contig_1	Pyrodigal	CDS	1625101	1626012	.	-	0	ID=GCA000153685_01534;Name=glucose-6-phosphate dehydrogenase assembly protein OpcA;locus_tag=GCA000153685_01534;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;Dbxref=GO:0006098,GO:0065003;gene=opcA;Parent=GCA000153685_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407437.1,SO:0001217,UniParc:UPI0000165035,UniRef:UniRef100_A0A0H3L8X3,UniRef:UniRef50_A0A7I7VSV2,UniRef:UniRef90_O06813
contig_1	Pyrodigal	gene	1626065	1627609	.	-	.	ID=GCA000153685_01535_gene;locus_tag=GCA000153685_01535;gene=zwf
contig_1	Pyrodigal	CDS	1626065	1627609	.	-	0	ID=GCA000153685_01535;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000153685_01535;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0005829,GO:0005886,GO:0006006,GO:0006098,GO:0009051,GO:0016614,GO:0050661;gene=zwf;Parent=GCA000153685_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00036,RefSeq:WP_003407443.1,SO:0001217,UniParc:UPI000012AF2A,UniRef:UniRef100_P9WN73,UniRef:UniRef50_P9WN73,UniRef:UniRef90_P9WN73;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1627606	1628727	.	-	.	ID=GCA000153685_01536_gene;locus_tag=GCA000153685_01536;gene=tal
contig_1	Pyrodigal	CDS	1627606	1628727	.	-	0	ID=GCA000153685_01536;Name=transaldolase;locus_tag=GCA000153685_01536;product=transaldolase;Dbxref=GO:0004801,GO:0005576,GO:0005737,GO:0005829,GO:0005975,GO:0006098;gene=tal;Parent=GCA000153685_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00616,RefSeq:WP_003407447.1,SO:0001217,UniParc:UPI0000165036,UniRef:UniRef100_P59955,UniRef:UniRef50_P9WG33,UniRef:UniRef90_P9WG33;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	1628744	1630846	.	-	.	ID=GCA000153685_01537_gene;locus_tag=GCA000153685_01537;gene=tkt
contig_1	Pyrodigal	CDS	1628744	1630846	.	-	0	ID=GCA000153685_01537;Name=transketolase;locus_tag=GCA000153685_01537;product=transketolase;Dbxref=GO:0000287,GO:0004802,GO:0005576,GO:0005829,GO:0005886,GO:0006098,GO:0009274;gene=tkt;Parent=GCA000153685_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_003407451.1,SO:0001217,UniParc:UPI00001A8FF2,UniRef:UniRef100_P59956,UniRef:UniRef50_P9WG25,UniRef:UniRef90_P9WG25;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	1631285	1635508	.	-	.	ID=GCA000153685_01538_gene;locus_tag=GCA000153685_01538
contig_1	Pyrodigal	CDS	1631285	1635508	.	-	0	ID=GCA000153685_01538;Name=PE family protein;locus_tag=GCA000153685_01538;product=PE family protein;Parent=GCA000153685_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054274.1,SO:0001217,UniParc:UPI0000F517D3,UniRef:UniRef100_A0AA44RKY7,UniRef:UniRef50_Q79FP2,UniRef:UniRef90_A0AA44RKY7
contig_1	Pyrodigal	gene	1635910	1636836	.	+	.	ID=GCA000153685_01539_gene;locus_tag=GCA000153685_01539;gene=ctaB
contig_1	Pyrodigal	CDS	1635910	1636836	.	+	0	ID=GCA000153685_01539;Name=heme o synthase;locus_tag=GCA000153685_01539;product=heme o synthase;Dbxref=GO:0005886,GO:0006783,GO:0008495,GO:0009274,GO:0016020,GO:0048034;gene=ctaB;Parent=GCA000153685_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898882.1,SO:0001217,UniParc:UPI00000D10CF,UniRef:UniRef100_P9WFR7,UniRef:UniRef50_P9WFR7,UniRef:UniRef90_P9WFR7;ec_number=2.5.1.141
contig_1	Pyrodigal	gene	1636885	1639098	.	-	.	ID=GCA000153685_01540_gene;locus_tag=GCA000153685_01540
contig_1	Pyrodigal	CDS	1636885	1639098	.	-	0	ID=GCA000153685_01540;Name=PE family protein;locus_tag=GCA000153685_01540;product=PE family protein;Parent=GCA000153685_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031648460.1,SO:0001217,UniParc:UPI00045B42A8,UniRef:UniRef100_UPI00045B42A8,UniRef:UniRef50_A0A9N7LXE4,UniRef:UniRef90_UPI0032B49D9D
contig_1	Pyrodigal	gene	1639217	1640515	.	+	.	ID=GCA000153685_01541_gene;locus_tag=GCA000153685_01541
contig_1	Pyrodigal	CDS	1639217	1640515	.	+	0	ID=GCA000153685_01541;Name=putative transcriptional activator protein;locus_tag=GCA000153685_01541;product=putative transcriptional activator protein;Parent=GCA000153685_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165038,UniRef:UniRef100_A0A0H3L8Y3,UniRef:UniRef50_A0A7I7NPH9,UniRef:UniRef90_O06807
contig_1	Pyrodigal	gene	1640543	1641529	.	-	.	ID=GCA000153685_01542_gene;locus_tag=GCA000153685_01542
contig_1	Pyrodigal	CDS	1640543	1641529	.	-	0	ID=GCA000153685_01542;Name=Quinone reductase;locus_tag=GCA000153685_01542;product=Quinone reductase;Parent=GCA000153685_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407462.1,SO:0001217,UniParc:UPI000016528F,UniRef:UniRef100_Q7D8F4,UniRef:UniRef50_A0A498QTM9,UniRef:UniRef90_A0A2I7W6J5
contig_1	Pyrodigal	gene	1641549	1642412	.	+	.	ID=GCA000153685_01543_gene;locus_tag=GCA000153685_01543;gene=dcsG
contig_1	Pyrodigal	CDS	1641549	1642412	.	+	0	ID=GCA000153685_01543;Name=Cycloserine biosynthesis protein DcsG;locus_tag=GCA000153685_01543;product=Cycloserine biosynthesis protein DcsG;gene=dcsG;Parent=GCA000153685_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900341.1,SO:0001217,UniParc:UPI0000165290,UniRef:UniRef100_O53147,UniRef:UniRef50_A0A9W4FE95,UniRef:UniRef90_Q7D8F3
contig_1	Pyrodigal	gene	1642362	1643294	.	-	.	ID=GCA000153685_01544_gene;locus_tag=GCA000153685_01544
contig_1	Pyrodigal	CDS	1642362	1643294	.	-	0	ID=GCA000153685_01544;Name=Heme A synthase;locus_tag=GCA000153685_01544;product=Heme A synthase;Parent=GCA000153685_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02259,RefSeq:WP_003407466.1,SO:0001217,UniParc:UPI0000165291,UniRef:UniRef100_A5U2F9,UniRef:UniRef50_A0A172UPF5,UniRef:UniRef90_Q7D8F2;ec_number=1.17.99.9
contig_1	Pyrodigal	gene	1643406	1644191	.	-	.	ID=GCA000153685_01545_gene;locus_tag=GCA000153685_01545
contig_1	Pyrodigal	CDS	1643406	1644191	.	-	0	ID=GCA000153685_01545;Name=ABC transporter permease;locus_tag=GCA000153685_01545;product=ABC transporter permease;Parent=GCA000153685_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407475.1,SO:0001217,UniParc:UPI00000D605A,UniRef:UniRef100_A5U2G0,UniRef:UniRef50_J9SIZ4,UniRef:UniRef90_A0A8I0JZ16
contig_1	Pyrodigal	gene	1644188	1645129	.	-	.	ID=GCA000153685_01546_gene;locus_tag=GCA000153685_01546
contig_1	Pyrodigal	CDS	1644188	1645129	.	-	0	ID=GCA000153685_01546;Name=Antibiotic ABC transporter ATP-binding protein;locus_tag=GCA000153685_01546;product=Antibiotic ABC transporter ATP-binding protein;Parent=GCA000153685_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407477.1,SO:0001217,UniParc:UPI00000D5E9D,UniRef:UniRef100_A5U2G1,UniRef:UniRef50_S4XE14,UniRef:UniRef90_A0A5R1Z5H5
contig_1	Pyrodigal	gene	1645285	1647060	.	-	.	ID=GCA000153685_01547_gene;locus_tag=GCA000153685_01547;gene=mptB
contig_1	Pyrodigal	CDS	1645285	1647060	.	-	0	ID=GCA000153685_01547;Name=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;locus_tag=GCA000153685_01547;product=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;Dbxref=GO:0016020,GO:0016757;gene=mptB;Parent=GCA000153685_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14339,RefSeq:WP_003407479.1,SO:0001217,UniParc:UPI00001A8FF7,UniRef:UniRef100_A0A1R3XYF9,UniRef:UniRef50_O53150,UniRef:UniRef90_O53150;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	1647180	1647914	.	+	.	ID=GCA000153685_01548_gene;locus_tag=GCA000153685_01548;gene=sufR
contig_1	Pyrodigal	CDS	1647180	1647914	.	+	0	ID=GCA000153685_01548;Name=suf operon transcriptional regulator SufR;locus_tag=GCA000153685_01548;product=suf operon transcriptional regulator SufR;gene=sufR;Parent=GCA000153685_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003902080,SO:0001217,UniParc:UPI00044B3DAC,UniRef:UniRef100_A0A9P1PDU0,UniRef:UniRef50_X7YQ76,UniRef:UniRef90_Q7D8E8
contig_1	Pyrodigal	gene	1647911	1650451	.	+	.	ID=GCA000153685_01549_gene;locus_tag=GCA000153685_01549;gene=sufB
contig_1	Pyrodigal	CDS	1647911	1650451	.	+	0	ID=GCA000153685_01549;Name=intein-containing Fe-S cluster assembly protein SufB;locus_tag=GCA000153685_01549;product=intein-containing Fe-S cluster assembly protein SufB;Dbxref=GO:0004519,GO:0006314,GO:0016226,GO:0016539;gene=sufB;Parent=GCA000153685_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407484,BlastRules:WP_003920235,BlastRules:WP_010907826,BlastRules:WP_015289878,BlastRules:WP_018196570,BlastRules:WP_171491685,BlastRules:WP_171491686,BlastRules:WP_171491687,BlastRules:WP_171491688,KEGG:K09014,RefSeq:WP_003900342.1,SO:0001217,UniParc:UPI000127800D,UniRef:UniRef100_A0A0H3LFH2,UniRef:UniRef50_P9WFP7,UniRef:UniRef90_P9WFP7
contig_1	Pyrodigal	gene	1650448	1651641	.	+	.	ID=GCA000153685_01550_gene;locus_tag=GCA000153685_01550;gene=sufD
contig_1	Pyrodigal	CDS	1650448	1651641	.	+	0	ID=GCA000153685_01550;Name=Fe-S cluster assembly protein SufD;locus_tag=GCA000153685_01550;product=Fe-S cluster assembly protein SufD;Dbxref=GO:0016226,GO:0052572;gene=sufD;Parent=GCA000153685_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407487.1,SO:0001217,UniParc:UPI000016503B,UniRef:UniRef100_P9WFP4,UniRef:UniRef50_P9WFP5,UniRef:UniRef90_P9WFP5
contig_1	Pyrodigal	gene	1651638	1652438	.	+	.	ID=GCA000153685_01551_gene;locus_tag=GCA000153685_01551;gene=sufC
contig_1	Pyrodigal	CDS	1651638	1652438	.	+	0	ID=GCA000153685_01551;Name=Fe-S cluster assembly ATPase SufC;locus_tag=GCA000153685_01551;product=Fe-S cluster assembly ATPase SufC;Dbxref=GO:0005524,GO:0016226;gene=sufC;Parent=GCA000153685_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407489.1,SO:0001217,UniParc:UPI00000D5E5D,UniRef:UniRef100_A5U2G6,UniRef:UniRef50_A0A0H3ECA5,UniRef:UniRef90_A0A5R1Z4I4
contig_1	Pyrodigal	gene	1652440	1653693	.	+	.	ID=GCA000153685_01552_gene;locus_tag=GCA000153685_01552;gene=csd
contig_1	Pyrodigal	CDS	1652440	1653693	.	+	0	ID=GCA000153685_01552;Name=putative cysteine desulfurase;locus_tag=GCA000153685_01552;product=putative cysteine desulfurase;Dbxref=GO:0005886,GO:0006534,GO:0030170,GO:0031071;gene=csd;Parent=GCA000153685_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407490.1,SO:0001217,UniParc:UPI0000128508,UniRef:UniRef100_P9WQ69,UniRef:UniRef50_P9WQ69,UniRef:UniRef90_P9WQ69;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1653690	1654178	.	+	.	ID=GCA000153685_01553_gene;locus_tag=GCA000153685_01553;gene=sufU
contig_1	Pyrodigal	CDS	1653690	1654178	.	+	0	ID=GCA000153685_01553;Name=Fe-S cluster assembly sulfur transfer protein SufU;locus_tag=GCA000153685_01553;product=Fe-S cluster assembly sulfur transfer protein SufU;Dbxref=GO:0005198,GO:0016226;gene=sufU;Parent=GCA000153685_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407491.1,SO:0001217,UniParc:UPI00000D6049,UniRef:UniRef100_O53156,UniRef:UniRef50_A0A2Z3YSN4,UniRef:UniRef90_O53156
contig_1	Pyrodigal	gene	1654153	1654500	.	+	.	ID=GCA000153685_01554_gene;locus_tag=GCA000153685_01554
contig_1	Pyrodigal	CDS	1654153	1654500	.	+	0	ID=GCA000153685_01554;Name=MIP18 family-like domain-containing protein;locus_tag=GCA000153685_01554;product=MIP18 family-like domain-containing protein;Parent=GCA000153685_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407492.1,SO:0001217,UniParc:UPI00000D10FC,UniRef:UniRef100_O53157,UniRef:UniRef50_C6W8C2,UniRef:UniRef90_D5PHP6
contig_1	Pyrodigal	gene	1654595	1656424	.	-	.	ID=GCA000153685_01555_gene;locus_tag=GCA000153685_01555
contig_1	Pyrodigal	CDS	1654595	1656424	.	-	0	ID=GCA000153685_01555;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_01555;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900343.1,SO:0001217,UniParc:UPI00000D5F2E,UniRef:UniRef100_A5U2H0,UniRef:UniRef50_O53666,UniRef:UniRef90_A0A0U0R175
contig_1	Pyrodigal	gene	1656531	1657643	.	-	.	ID=GCA000153685_01556_gene;locus_tag=GCA000153685_01556;gene=pE_PGRS29
contig_1	Pyrodigal	CDS	1656531	1657643	.	-	0	ID=GCA000153685_01556;Name=Ubiquitin-binding protein Rv1468c;locus_tag=GCA000153685_01556;product=Ubiquitin-binding protein Rv1468c;Dbxref=GO:0005576,GO:0009986;gene=pE_PGRS29;Parent=GCA000153685_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407494.1,SO:0001217,UniParc:UPI0000165292,UniRef:UniRef100_Q79FP0,UniRef:UniRef50_Q79FP0,UniRef:UniRef90_Q79FP0
contig_1	Pyrodigal	gene	1657885	1659858	.	+	.	ID=GCA000153685_01557_gene;locus_tag=GCA000153685_01557;gene=ctpD
contig_1	Pyrodigal	CDS	1657885	1659858	.	+	0	ID=GCA000153685_01557;Name=cobalt-translocating P-type ATPase CtpD;locus_tag=GCA000153685_01557;product=cobalt-translocating P-type ATPase CtpD;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0019829,GO:0046872;gene=ctpD;Parent=GCA000153685_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900344,BlastRules:WP_011730513,RefSeq:WP_003900344.1,SO:0001217,UniParc:UPI0000128642,UniRef:UniRef100_P9WPT3,UniRef:UniRef50_A0R3A7,UniRef:UniRef90_P9WPT3;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	1659902	1660276	.	+	.	ID=GCA000153685_01558_gene;locus_tag=GCA000153685_01558;gene=trxA
contig_1	Pyrodigal	CDS	1659902	1660276	.	+	0	ID=GCA000153685_01558;Name=Thioredoxin TrxA;locus_tag=GCA000153685_01558;product=Thioredoxin TrxA;gene=trxA;Parent=GCA000153685_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900345.1,SO:0001217,UniParc:UPI00000D1061,UniRef:UniRef100_A5U2H3,UniRef:UniRef50_L7V996,UniRef:UniRef90_A5U2H3
contig_1	Pyrodigal	gene	1660292	1660663	.	+	.	ID=GCA000153685_01559_gene;locus_tag=GCA000153685_01559;gene=trxA
contig_1	Pyrodigal	CDS	1660292	1660663	.	+	0	ID=GCA000153685_01559;Name=thioredoxin;locus_tag=GCA000153685_01559;product=thioredoxin;Dbxref=GO:0015035;gene=trxA;Parent=GCA000153685_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407501.1,SO:0001217,UniParc:UPI00000D1120,UniRef:UniRef100_L7N664,UniRef:UniRef50_L7N664,UniRef:UniRef90_L7N664
contig_1	Pyrodigal	gene	1660685	1661542	.	+	.	ID=GCA000153685_01560_gene;locus_tag=GCA000153685_01560;gene=echA12
contig_1	Pyrodigal	CDS	1660685	1661542	.	+	0	ID=GCA000153685_01560;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_01560;product=enoyl-CoA hydratase;Dbxref=GO:0004300,GO:0005886,GO:0006635;gene=echA12;Parent=GCA000153685_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898888.1,SO:0001217,UniParc:UPI0000129B72,UniRef:UniRef100_P9WNN7,UniRef:UniRef50_P9WNN7,UniRef:UniRef90_P9WNN7;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	1661578	1663206	.	+	.	ID=GCA000153685_01561_gene;locus_tag=GCA000153685_01561;gene=ccmA
contig_1	Pyrodigal	CDS	1661578	1663206	.	+	0	ID=GCA000153685_01561;Name=macrolide ABC transporter ATP-binding protein;locus_tag=GCA000153685_01561;product=macrolide ABC transporter ATP-binding protein;Dbxref=GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190;gene=ccmA;Parent=GCA000153685_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407507,COG:COG0488,COG:R,RefSeq:WP_003407507.1,SO:0001217,UniParc:UPI00000D5F2C,UniRef:UniRef100_A5U2H6,UniRef:UniRef50_F8E2K2,UniRef:UniRef90_Q740Z4;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	1663303	1663494	.	+	.	ID=GCA000153685_01562_gene;locus_tag=GCA000153685_01562
contig_1	Pyrodigal	CDS	1663303	1663494	.	+	0	ID=GCA000153685_01562;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000153685_01562;product=Helix-turn-helix domain-containing protein;Parent=GCA000153685_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407511.1,SO:0001217,UniParc:UPI00000D2C2A,UniRef:UniRef100_L7N691,UniRef:UniRef50_A0A7I7XGJ3,UniRef:UniRef90_A0A7Z7ILW6
contig_1	Pyrodigal	gene	1663563	1664126	.	-	.	ID=GCA000153685_01563_gene;locus_tag=GCA000153685_01563;gene=acrR
contig_1	Pyrodigal	CDS	1663563	1664126	.	-	0	ID=GCA000153685_01563;Name=HTH-type transcriptional repressor Rv1474c;locus_tag=GCA000153685_01563;product=HTH-type transcriptional repressor Rv1474c;Dbxref=GO:0000976,GO:0003700,GO:0006355,GO:0009274;gene=acrR;Parent=GCA000153685_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_003407514.1,SO:0001217,UniParc:UPI00000D5FA0,UniRef:UniRef100_O53165,UniRef:UniRef50_O53165,UniRef:UniRef90_O53165
contig_1	Pyrodigal	gene	1664137	1666968	.	-	.	ID=GCA000153685_01564_gene;locus_tag=GCA000153685_01564;gene=acn
contig_1	Pyrodigal	CDS	1664137	1666968	.	-	0	ID=GCA000153685_01564;Name=iron-regulated aconitate hydratase Acn;locus_tag=GCA000153685_01564;product=iron-regulated aconitate hydratase Acn;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0005576,GO:0005829,GO:0005886,GO:0006099,GO:0006101,GO:0009274,GO:0010039,GO:0019679,GO:0030350,GO:0046872,GO:0047456,GO:0051539;gene=acn;Parent=GCA000153685_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898889,KEGG:K27802,RefSeq:WP_003898889.1,SO:0001217,UniParc:UPI00000D0F85,UniRef:UniRef100_O53166,UniRef:UniRef50_O53166,UniRef:UniRef90_O53166;ec_number=4.2.1.3
contig_1	Pyrodigal	gene	1667126	1667686	.	+	.	ID=GCA000153685_01565_gene;locus_tag=GCA000153685_01565
contig_1	Pyrodigal	CDS	1667126	1667686	.	+	0	ID=GCA000153685_01565;Name=Membrane protein Rv1476;locus_tag=GCA000153685_01565;product=Membrane protein Rv1476;Dbxref=GO:0005886;Parent=GCA000153685_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407520.1,SO:0001217,UniParc:UPI00000D0F91,UniRef:UniRef100_O53167,UniRef:UniRef50_O53167,UniRef:UniRef90_O53167
contig_1	Pyrodigal	gene	1667912	1669330	.	+	.	ID=GCA000153685_01566_gene;locus_tag=GCA000153685_01566;gene=ripA
contig_1	Pyrodigal	CDS	1667912	1669330	.	+	0	ID=GCA000153685_01566;Name=NlpC/P60 family peptidoglycan endopeptidase RipA;locus_tag=GCA000153685_01566;product=NlpC/P60 family peptidoglycan endopeptidase RipA;Dbxref=GO:0005576,GO:0006508,GO:0008234,GO:0008745,GO:0009274,GO:0071554,GO:0071555;gene=ripA;Parent=GCA000153685_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21473,RefSeq:WP_003407523.1,SO:0001217,UniParc:UPI000004B723,UniRef:UniRef100_O53168,UniRef:UniRef50_O53168,UniRef:UniRef90_O53168;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1669341	1670066	.	+	.	ID=GCA000153685_01567_gene;locus_tag=GCA000153685_01567;gene=ripB
contig_1	Pyrodigal	CDS	1669341	1670066	.	+	0	ID=GCA000153685_01567;Name=NlpC/P60 family peptidoglycan endopeptidase RipB;locus_tag=GCA000153685_01567;product=NlpC/P60 family peptidoglycan endopeptidase RipB;Dbxref=GO:0006508,GO:0008234,GO:0009274,GO:0071555;gene=ripB;Parent=GCA000153685_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21474,RefSeq:WP_003407525.1,SO:0001217,UniParc:UPI000004B724,UniRef:UniRef100_P9WHU5,UniRef:UniRef50_P9WHU5,UniRef:UniRef90_P9WHU5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1670205	1671338	.	+	.	ID=GCA000153685_01568_gene;locus_tag=GCA000153685_01568;gene=moxR1
contig_1	Pyrodigal	CDS	1670205	1671338	.	+	0	ID=GCA000153685_01568;Name=Chaperone MoxR1;locus_tag=GCA000153685_01568;product=Chaperone MoxR1;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0016887;gene=moxR1;Parent=GCA000153685_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898890.1,SO:0001217,UniParc:UPI000016503D,UniRef:UniRef100_A0A0H3LFJ1,UniRef:UniRef50_Q79FN7,UniRef:UniRef90_Q79FN7
contig_1	Pyrodigal	gene	1671335	1672288	.	+	.	ID=GCA000153685_01569_gene;locus_tag=GCA000153685_01569
contig_1	Pyrodigal	CDS	1671335	1672288	.	+	0	ID=GCA000153685_01569;Name=putative protein Rv1480;locus_tag=GCA000153685_01569;product=putative protein Rv1480;Dbxref=GO:0005829,GO:0005886;Parent=GCA000153685_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407529.1,SO:0001217,UniParc:UPI000013AB44,UniRef:UniRef100_P9WLX5,UniRef:UniRef50_P9WLX5,UniRef:UniRef90_P9WLX5
contig_1	Pyrodigal	gene	1672299	1673306	.	+	.	ID=GCA000153685_01570_gene;locus_tag=GCA000153685_01570;gene=chlD
contig_1	Pyrodigal	CDS	1672299	1673306	.	+	0	ID=GCA000153685_01570;Name=UPF0353 protein Rv1481;locus_tag=GCA000153685_01570;product=UPF0353 protein Rv1481;Dbxref=GO:0005886;gene=chlD;Parent=GCA000153685_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1240,COG:H,RefSeq:WP_003407530.1,SO:0001217,UniParc:UPI000013AB47,UniRef:UniRef100_P9WFJ7,UniRef:UniRef50_P9WFJ7,UniRef:UniRef90_P9WFJ7
contig_1	Pyrodigal	gene	1673379	1674302	.	-	.	ID=GCA000153685_01571_gene;locus_tag=GCA000153685_01571
contig_1	Pyrodigal	CDS	1673379	1674302	.	-	0	ID=GCA000153685_01571;Name=Cullin%2C a subunit of E3 ubiquitin ligase;locus_tag=GCA000153685_01571;product=Cullin%2C a subunit of E3 ubiquitin ligase;Parent=GCA000153685_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000308D4D6,UniRef:UniRef100_P71763,UniRef:UniRef50_A0A7I7YBM0,UniRef:UniRef90_P71763
contig_1	Pyrodigal	gene	1674362	1675105	.	+	.	ID=GCA000153685_01572_gene;locus_tag=GCA000153685_01572;gene=fabG1
contig_1	Pyrodigal	CDS	1674362	1675105	.	+	0	ID=GCA000153685_01572;Name=3-oxoacyl-ACP reductase FabG1;locus_tag=GCA000153685_01572;product=3-oxoacyl-ACP reductase FabG1;Dbxref=GO:0004316,GO:0005576,GO:0005886,GO:0018454,GO:0046459,GO:0070402,GO:0071768;gene=fabG1;Parent=GCA000153685_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898892,RefSeq:WP_003898892.1,SO:0001217,UniParc:UPI000012A460,UniRef:UniRef100_P9WGT3,UniRef:UniRef50_P9WGT3,UniRef:UniRef90_P9WGT3;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1675124	1675933	.	+	.	ID=GCA000153685_01573_gene;locus_tag=GCA000153685_01573;gene=inhA
contig_1	Pyrodigal	CDS	1675124	1675933	.	+	0	ID=GCA000153685_01573;Name=NADH-dependent enoyl-ACP reductase InhA;locus_tag=GCA000153685_01573;product=NADH-dependent enoyl-ACP reductase InhA;Dbxref=GO:0004318,GO:0005504,GO:0005886,GO:0009274,GO:0030497,GO:0046677,GO:0050343,GO:0070403,GO:0071768;gene=inhA;Parent=GCA000153685_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,KEGG:K11611,RefSeq:WP_003407553.1,SO:0001217,UniParc:UPI0000005230,UniRef:UniRef100_P9WGR1,UniRef:UniRef50_P9WGR1,UniRef:UniRef90_P9WGR1;ec_number=1.3.1.9
contig_1	Pyrodigal	gene	1675939	1676973	.	+	.	ID=GCA000153685_01574_gene;locus_tag=GCA000153685_01574;gene=cpfC
contig_1	Pyrodigal	CDS	1675939	1676973	.	+	0	ID=GCA000153685_01574;Name=ferrochelatase;locus_tag=GCA000153685_01574;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0005886,GO:0006783,GO:0046872,GO:0051537;gene=cpfC;Parent=GCA000153685_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01772,RefSeq:WP_003407559.1,SO:0001217,UniParc:UPI000012C5DE,UniRef:UniRef100_P9WNE3,UniRef:UniRef50_P9WNE3,UniRef:UniRef90_P9WNE3;ec_number=4.99.1.9
contig_1	Pyrodigal	gene	1676939	1677847	.	-	.	ID=GCA000153685_01575_gene;locus_tag=GCA000153685_01575
contig_1	Pyrodigal	CDS	1676939	1677847	.	-	0	ID=GCA000153685_01575;Name=putative protein Rv1486c;locus_tag=GCA000153685_01575;product=putative protein Rv1486c;Parent=GCA000153685_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE557,UniRef:UniRef100_P9WLX2,UniRef:UniRef50_O07402,UniRef:UniRef90_P9WLX3
contig_1	Pyrodigal	gene	1677863	1678297	.	+	.	ID=GCA000153685_01576_gene;locus_tag=GCA000153685_01576
contig_1	Pyrodigal	CDS	1677863	1678297	.	+	0	ID=GCA000153685_01576;Name=NfeD-like C-terminal domain-containing protein;locus_tag=GCA000153685_01576;product=NfeD-like C-terminal domain-containing protein;Parent=GCA000153685_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407562.1,SO:0001217,UniParc:UPI00000D122F,UniRef:UniRef100_P71767,UniRef:UniRef50_Q9CBM4,UniRef:UniRef90_A0A2I7W6R0
contig_1	Pyrodigal	gene	1678319	1679464	.	+	.	ID=GCA000153685_01577_gene;locus_tag=GCA000153685_01577;gene=hflC
contig_1	Pyrodigal	CDS	1678319	1679464	.	+	0	ID=GCA000153685_01577;Name=putative protein Mb1524;locus_tag=GCA000153685_01577;product=putative protein Mb1524;Dbxref=GO:0016020;gene=hflC;Parent=GCA000153685_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_003407571.1,SO:0001217,UniParc:UPI000013AB60,UniRef:UniRef100_P9WPR9,UniRef:UniRef50_P9WPR9,UniRef:UniRef90_P9WPR9
contig_1	Pyrodigal	gene	1679474	1679830	.	+	.	ID=GCA000153685_01578_gene;locus_tag=GCA000153685_01578;gene=doxX
contig_1	Pyrodigal	CDS	1679474	1679830	.	+	0	ID=GCA000153685_01578;Name=DoxX family protein;locus_tag=GCA000153685_01578;product=DoxX family protein;gene=doxX;Parent=GCA000153685_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900347.1,SO:0001217,UniParc:UPI00000D2C2B,UniRef:UniRef100_L7N692,UniRef:UniRef50_A0A1A3H114,UniRef:UniRef90_A0A829C6I4
contig_1	Pyrodigal	gene	1679885	1680094	.	+	.	ID=GCA000153685_01579_gene;locus_tag=GCA000153685_01579
contig_1	Pyrodigal	CDS	1679885	1680094	.	+	0	ID=GCA000153685_01579;Name=Methylmalonyl-CoA mutase;locus_tag=GCA000153685_01579;product=Methylmalonyl-CoA mutase;Parent=GCA000153685_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003918261.1,SO:0001217,UniParc:UPI00022F2F60,UniRef:UniRef100_A0A0E7Z8W7,UniRef:UniRef50_A0A0E7Z8W7,UniRef:UniRef90_A0A0E7Z8W7
contig_1	Pyrodigal	gene	1680244	1681551	.	+	.	ID=GCA000153685_01580_gene;locus_tag=GCA000153685_01580
contig_1	Pyrodigal	CDS	1680244	1681551	.	+	0	ID=GCA000153685_01580;Name=putative protein Mb1527;locus_tag=GCA000153685_01580;product=putative protein Mb1527;Dbxref=GO:0005886;Parent=GCA000153685_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898896.1,SO:0001217,UniParc:UPI000013AB6A,UniRef:UniRef100_P9WLX1,UniRef:UniRef50_P9WLX1,UniRef:UniRef90_P9WLX1
contig_1	Pyrodigal	gene	1682130	1682888	.	-	.	ID=GCA000153685_01581_gene;locus_tag=GCA000153685_01581
contig_1	Pyrodigal	CDS	1682130	1682888	.	-	0	ID=GCA000153685_01581;Name=TVP38/TMEM64 family membrane protein Mb1528c;locus_tag=GCA000153685_01581;product=TVP38/TMEM64 family membrane protein Mb1528c;Dbxref=GO:0005886;Parent=GCA000153685_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407583.1,SO:0001217,UniParc:UPI000013AB6F,UniRef:UniRef100_P9WFS3,UniRef:UniRef50_P9WFS3,UniRef:UniRef90_P9WFS3
contig_1	Pyrodigal	gene	1683079	1684926	.	+	.	ID=GCA000153685_01582_gene;locus_tag=GCA000153685_01582;gene=mutA
contig_1	Pyrodigal	CDS	1683079	1684926	.	+	0	ID=GCA000153685_01582;Name=methylmalonyl-CoA mutase small subunit;locus_tag=GCA000153685_01582;product=methylmalonyl-CoA mutase small subunit;Dbxref=GO:0004494,GO:0005737,GO:0005829,GO:0005886,GO:0009274,GO:0019652,GO:0019678,GO:0031419,GO:0046872;gene=mutA;Parent=GCA000153685_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407585.1,SO:0001217,UniParc:UPI000012FA2B,UniRef:UniRef100_P9WJK7,UniRef:UniRef50_P9WJK7,UniRef:UniRef90_P9WJK7;ec_number=5.4.99.2
contig_1	Pyrodigal	gene	1684927	1687179	.	+	.	ID=GCA000153685_01583_gene;locus_tag=GCA000153685_01583;gene=scpA
contig_1	Pyrodigal	CDS	1684927	1687179	.	+	0	ID=GCA000153685_01583;Name=methylmalonyl-CoA mutase;locus_tag=GCA000153685_01583;product=methylmalonyl-CoA mutase;Dbxref=GO:0004494,GO:0005737,GO:0005886,GO:0019678,GO:0031419,GO:0046872;gene=scpA;Parent=GCA000153685_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01847,RefSeq:WP_003407587.1,SO:0001217,UniParc:UPI000012FA2F,UniRef:UniRef100_P9WJK5,UniRef:UniRef50_Q05065,UniRef:UniRef90_P9WJK5;ec_number=5.4.99.2
contig_1	Pyrodigal	gene	1687193	1687495	.	+	.	ID=GCA000153685_01584_gene;locus_tag=GCA000153685_01584;gene=mazE4
contig_1	Pyrodigal	CDS	1687193	1687495	.	+	0	ID=GCA000153685_01584;Name=type II toxin-antitoxin system antitoxin MazE4;locus_tag=GCA000153685_01584;product=type II toxin-antitoxin system antitoxin MazE4;gene=mazE4;Parent=GCA000153685_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900349,KEGG:K26984,RefSeq:WP_003900349.1,SO:0001217,UniParc:UPI000013AB79,UniRef:UniRef100_P9WJ91,UniRef:UniRef50_P9WJ91,UniRef:UniRef90_P9WJ91
contig_1	Pyrodigal	gene	1687492	1687809	.	+	.	ID=GCA000153685_01585_gene;locus_tag=GCA000153685_01585;gene=mazF4
contig_1	Pyrodigal	CDS	1687492	1687809	.	+	0	ID=GCA000153685_01585;Name=type II toxin-antitoxin system toxin endoribonuclease MazF4;locus_tag=GCA000153685_01585;product=type II toxin-antitoxin system toxin endoribonuclease MazF4;Dbxref=GO:0003677,GO:0004521,GO:0004857,GO:0006402,GO:0016075;gene=mazF4;Parent=GCA000153685_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407593,RefSeq:WP_003407593.1,SO:0001217,UniParc:UPI000013AB7E,UniRef:UniRef100_P9WII5,UniRef:UniRef50_P9WII5,UniRef:UniRef90_P9WII5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1687806	1688810	.	+	.	ID=GCA000153685_01586_gene;locus_tag=GCA000153685_01586;gene=meaB
contig_1	Pyrodigal	CDS	1687806	1688810	.	+	0	ID=GCA000153685_01586;Name=methylmalonyl Co-A mutase-associated GTPase MeaB;locus_tag=GCA000153685_01586;product=methylmalonyl Co-A mutase-associated GTPase MeaB;Dbxref=GO:0003924,GO:0005524,GO:0005525,GO:0005737;gene=meaB;Parent=GCA000153685_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07588,RefSeq:WP_003407596.1,SO:0001217,UniParc:UPI000013AB82,UniRef:UniRef100_A0A679LEA9,UniRef:UniRef50_P9WPZ1,UniRef:UniRef90_P9WPZ1;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1688866	1690152	.	+	.	ID=GCA000153685_01587_gene;locus_tag=GCA000153685_01587;gene=lipL
contig_1	Pyrodigal	CDS	1688866	1690152	.	+	0	ID=GCA000153685_01587;Name=Esterase/beta-lactamase LipL;locus_tag=GCA000153685_01587;product=Esterase/beta-lactamase LipL;Dbxref=GO:0004806,GO:0005576,GO:0005886,GO:0008126,GO:0008800,GO:0046503;gene=lipL;Parent=GCA000153685_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001278070,UniRef:UniRef100_A0A0H3LFL5,UniRef:UniRef50_P71778,UniRef:UniRef90_P71778;ec_number=3.5.2.6
contig_1	Pyrodigal	gene	1690225	1690842	.	-	.	ID=GCA000153685_01588_gene;locus_tag=GCA000153685_01588
contig_1	Pyrodigal	CDS	1690225	1690842	.	-	0	ID=GCA000153685_01588;Name=putative methyltransferase Rv1498c;locus_tag=GCA000153685_01588;product=putative methyltransferase Rv1498c;Dbxref=GO:0008168,GO:0008757,GO:0032259;Parent=GCA000153685_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407606.1,SO:0001217,UniParc:UPI00001A8FFB,UniRef:UniRef100_A0A0H3L8L1,UniRef:UniRef50_P9WLW9,UniRef:UniRef90_P9WLW9;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1691056	1691268	.	-	.	ID=GCA000153685_01589_gene;locus_tag=GCA000153685_01589
contig_1	Pyrodigal	CDS	1691056	1691268	.	-	0	ID=GCA000153685_01589;Name=dodecin;locus_tag=GCA000153685_01589;product=dodecin;Dbxref=GO:0000166;Parent=GCA000153685_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898900.1,SO:0001217,UniParc:UPI00000D2C2E,UniRef:UniRef100_I6XY36,UniRef:UniRef50_A0A0F7VTB0,UniRef:UniRef90_I6XY36
contig_1	Pyrodigal	gene	1691772	1692800	.	+	.	ID=GCA000153685_01590_gene;locus_tag=GCA000153685_01590;gene=pimF
contig_1	Pyrodigal	CDS	1691772	1692800	.	+	0	ID=GCA000153685_01590;Name=Putative glycosyltransferases;locus_tag=GCA000153685_01590;product=Putative glycosyltransferases;Dbxref=GO:0005886,GO:0016757;gene=pimF;Parent=GCA000153685_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13670,RefSeq:WP_003407612.1,SO:0001217,UniParc:UPI00000D1217,UniRef:UniRef100_P9WMX5,UniRef:UniRef50_P9WMX5,UniRef:UniRef90_P9WMX5;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1692812	1693633	.	+	.	ID=GCA000153685_01591_gene;locus_tag=GCA000153685_01591
contig_1	Pyrodigal	CDS	1692812	1693633	.	+	0	ID=GCA000153685_01591;Name=putative protein Rv1501;locus_tag=GCA000153685_01591;product=putative protein Rv1501;Dbxref=GO:0005506,GO:0016706;Parent=GCA000153685_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898901.1,SO:0001217,UniParc:UPI000013ACD4,UniRef:UniRef100_P9WI91,UniRef:UniRef50_P9WI91,UniRef:UniRef90_P9WI91
contig_1	Pyrodigal	gene	1693846	1694745	.	+	.	ID=GCA000153685_01592_gene;locus_tag=GCA000153685_01592
contig_1	Pyrodigal	CDS	1693846	1694745	.	+	0	ID=GCA000153685_01592;Name=putative protein Rv1502;locus_tag=GCA000153685_01592;product=putative protein Rv1502;Parent=GCA000153685_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407616.1,SO:0001217,UniParc:UPI0000165045,UniRef:UniRef100_P9WLW6,UniRef:UniRef50_P9WLW7,UniRef:UniRef90_P9WLW7
contig_1	Pyrodigal	gene	1694918	1695358	.	-	.	ID=GCA000153685_01593_gene;locus_tag=GCA000153685_01593
contig_1	Pyrodigal	CDS	1694918	1695358	.	-	0	ID=GCA000153685_01593;Name=TDP-4-oxo-6-deoxy-D-glucose transaminase;locus_tag=GCA000153685_01593;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;Parent=GCA000153685_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF483D,UniRef:UniRef100_A5U2K9,UniRef:UniRef50_A5U2K9,UniRef:UniRef90_A5U2K9
contig_1	Pyrodigal	gene	1695467	1696030	.	-	.	ID=GCA000153685_01594_gene;locus_tag=GCA000153685_01594;gene=rffA
contig_1	Pyrodigal	CDS	1695467	1696030	.	-	0	ID=GCA000153685_01594;Name=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;locus_tag=GCA000153685_01594;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;Dbxref=GO:0009246,GO:0019180;gene=rffA;Parent=GCA000153685_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02805,SO:0001217,UniParc:UPI00005EE55C,UniRef:UniRef100_L0T6V0,UniRef:UniRef50_A0A7Z0Q4P7,UniRef:UniRef90_A0A829CBL3;ec_number=2.6.1.59
contig_1	Pyrodigal	gene	1696203	1696868	.	-	.	ID=GCA000153685_01595_gene;locus_tag=GCA000153685_01595
contig_1	Pyrodigal	CDS	1696203	1696868	.	-	0	ID=GCA000153685_01595;Name=Transferase;locus_tag=GCA000153685_01595;product=Transferase;Parent=GCA000153685_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900352.1,SO:0001217,UniParc:UPI000127809D,UniRef:UniRef100_A0A0H3LFN8,UniRef:UniRef50_A0A0F9Z531,UniRef:UniRef90_P71784
contig_1	Pyrodigal	gene	1696865	1697365	.	-	.	ID=GCA000153685_01596_gene;locus_tag=GCA000153685_01596
contig_1	Pyrodigal	CDS	1696865	1697365	.	-	0	ID=GCA000153685_01596;Name=Putative methyltransferase Rv1506c;locus_tag=GCA000153685_01596;product=Putative methyltransferase Rv1506c;Dbxref=GO:0008168,GO:0009247,GO:0016020,GO:0032259,GO:0052170;Parent=GCA000153685_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902091.1,SO:0001217,UniParc:UPI00000CCC2B,UniRef:UniRef100_P71785,UniRef:UniRef50_P71785,UniRef:UniRef90_P71785;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1697649	1698344	.	-	.	ID=GCA000153685_01597_gene;locus_tag=GCA000153685_01597
contig_1	Pyrodigal	CDS	1697649	1698344	.	-	0	ID=GCA000153685_01597;Name=putative protein Rv1507c;locus_tag=GCA000153685_01597;product=putative protein Rv1507c;Dbxref=GO:0005886;Parent=GCA000153685_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407623.1,SO:0001217,UniParc:UPI000013ACE9,UniRef:UniRef100_P9WLW5,UniRef:UniRef50_P9WLW5,UniRef:UniRef90_P9WLW5
contig_1	Pyrodigal	gene	1699017	1700576	.	-	.	ID=GCA000153685_01598_gene;locus_tag=GCA000153685_01598
contig_1	Pyrodigal	CDS	1699017	1700576	.	-	0	ID=GCA000153685_01598;Name=DUF2029 domain-containing protein;locus_tag=GCA000153685_01598;product=DUF2029 domain-containing protein;Parent=GCA000153685_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003914005.1,SO:0001217,UniParc:UPI00005EE55E,UniRef:UniRef100_A0A0H3L9Q2,UniRef:UniRef50_R4MD95,UniRef:UniRef90_R4MD95
contig_1	Pyrodigal	gene	1700788	1701150	.	+	.	ID=GCA000153685_01599_gene;locus_tag=GCA000153685_01599
contig_1	Pyrodigal	CDS	1700788	1701150	.	+	0	ID=GCA000153685_01599;Name=NAD(P)-binding domain-containing protein;locus_tag=GCA000153685_01599;product=NAD(P)-binding domain-containing protein;Parent=GCA000153685_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407628.1,SO:0001217,UniParc:UPI0000220065,UniRef:UniRef100_Q79FN0,UniRef:UniRef50_Q79FN0,UniRef:UniRef90_Q79FN0
contig_1	Pyrodigal	gene	1701251	1702015	.	+	.	ID=GCA000153685_01600_gene;locus_tag=GCA000153685_01600
contig_1	Pyrodigal	CDS	1701251	1702015	.	+	0	ID=GCA000153685_01600;Name=putative protein Rv1509;locus_tag=GCA000153685_01600;product=putative protein Rv1509;Dbxref=GO:0008168;Parent=GCA000153685_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE55F,UniRef:UniRef100_P9WLW3,UniRef:UniRef50_P9WLW3,UniRef:UniRef90_P9WLW3
contig_1	Pyrodigal	gene	1702020	1702268	.	+	.	ID=GCA000153685_01601_gene;locus_tag=GCA000153685_01601
contig_1	Pyrodigal	CDS	1702020	1702268	.	+	0	ID=GCA000153685_01601;Name=Membrane protein;locus_tag=GCA000153685_01601;product=Membrane protein;Parent=GCA000153685_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045A7BB8,UniRef:UniRef100_A0A0E8VA61,UniRef:UniRef50_A0A0E8VA61,UniRef:UniRef90_A0A0E8VA61
contig_1	Pyrodigal	gene	1702217	1703515	.	+	.	ID=GCA000153685_01602_gene;locus_tag=GCA000153685_01602
contig_1	Pyrodigal	CDS	1702217	1703515	.	+	0	ID=GCA000153685_01602;Name=putative protein Rv1510;locus_tag=GCA000153685_01602;product=putative protein Rv1510;Dbxref=GO:0005886,GO:0046812;Parent=GCA000153685_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901183.1,SO:0001217,UniParc:UPI000013ACF4,UniRef:UniRef100_P9WLW1,UniRef:UniRef50_P9WKX9,UniRef:UniRef90_P9WLW1
contig_1	Pyrodigal	gene	1703996	1705018	.	+	.	ID=GCA000153685_01603_gene;locus_tag=GCA000153685_01603;gene=gmd
contig_1	Pyrodigal	CDS	1703996	1705018	.	+	0	ID=GCA000153685_01603;Name=GDP-mannose 4%2C6-dehydratase;locus_tag=GCA000153685_01603;product=GDP-mannose 4%2C6-dehydratase;Dbxref=GO:0000271,GO:0008446,GO:0019673;gene=gmd;Parent=GCA000153685_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01711,RefSeq:WP_003407639.1,SO:0001217,UniParc:UPI000002E8B3,UniRef:UniRef100_P71790,UniRef:UniRef50_P71790,UniRef:UniRef90_P71790;ec_number=4.2.1.47
contig_1	Pyrodigal	gene	1705015	1705983	.	+	.	ID=GCA000153685_01604_gene;locus_tag=GCA000153685_01604
contig_1	Pyrodigal	CDS	1705015	1705983	.	+	0	ID=GCA000153685_01604;Name=GDP-L-fucose synthase;locus_tag=GCA000153685_01604;product=GDP-L-fucose synthase;Parent=GCA000153685_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02377,RefSeq:WP_003407642.1,SO:0001217,UniParc:UPI00000CCC2C,UniRef:UniRef100_P71791,UniRef:UniRef50_P71791,UniRef:UniRef90_P71791;ec_number=1.1.1.271
contig_1	Pyrodigal	gene	1705980	1706711	.	+	.	ID=GCA000153685_01605_gene;locus_tag=GCA000153685_01605;gene=fkbM
contig_1	Pyrodigal	CDS	1705980	1706711	.	+	0	ID=GCA000153685_01605;Name=Methyltransferase FkbM domain-containing protein;locus_tag=GCA000153685_01605;product=Methyltransferase FkbM domain-containing protein;gene=fkbM;Parent=GCA000153685_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407647.1,SO:0001217,UniParc:UPI000002E8B4,UniRef:UniRef100_P71792,UniRef:UniRef50_Q740V9,UniRef:UniRef90_R4M6P6
contig_1	Pyrodigal	gene	1706729	1707517	.	-	.	ID=GCA000153685_01606_gene;locus_tag=GCA000153685_01606
contig_1	Pyrodigal	CDS	1706729	1707517	.	-	0	ID=GCA000153685_01606;Name=putative glycosyltransferase Rv1514c;locus_tag=GCA000153685_01606;product=putative glycosyltransferase Rv1514c;Dbxref=GO:0016757;Parent=GCA000153685_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407650.1,SO:0001217,UniParc:UPI000002E8B2,UniRef:UniRef100_P9WMX9,UniRef:UniRef50_P9WMX9,UniRef:UniRef90_P9WMX9;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1707552	1708448	.	-	.	ID=GCA000153685_01607_gene;locus_tag=GCA000153685_01607
contig_1	Pyrodigal	CDS	1707552	1708448	.	-	0	ID=GCA000153685_01607;Name=Methyltransferase type 11 domain-containing protein;locus_tag=GCA000153685_01607;product=Methyltransferase type 11 domain-containing protein;Parent=GCA000153685_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900356.1,SO:0001217,UniParc:UPI00000CCC2D,UniRef:UniRef100_P71794,UniRef:UniRef50_P71794,UniRef:UniRef90_P71794
contig_1	Pyrodigal	gene	1708451	1709461	.	-	.	ID=GCA000153685_01608_gene;locus_tag=GCA000153685_01608
contig_1	Pyrodigal	CDS	1708451	1709461	.	-	0	ID=GCA000153685_01608;Name=Glycosyl transferase;locus_tag=GCA000153685_01608;product=Glycosyl transferase;Parent=GCA000153685_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900357.1,SO:0001217,UniParc:UPI0000220066,UniRef:UniRef100_A5U2M3,UniRef:UniRef50_P9WLV5,UniRef:UniRef90_Q7D8C1
contig_1	Pyrodigal	gene	1709793	1710557	.	+	.	ID=GCA000153685_01609_gene;locus_tag=GCA000153685_01609
contig_1	Pyrodigal	CDS	1709793	1710557	.	+	0	ID=GCA000153685_01609;Name=GAP family protein;locus_tag=GCA000153685_01609;product=GAP family protein;Parent=GCA000153685_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407654.1,SO:0001217,UniParc:UPI000016504D,UniRef:UniRef100_Q7D8C0,UniRef:UniRef50_Q7D8C0,UniRef:UniRef90_Q7D8C0
contig_1	Pyrodigal	gene	1710566	1711525	.	+	.	ID=GCA000153685_01610_gene;locus_tag=GCA000153685_01610
contig_1	Pyrodigal	CDS	1710566	1711525	.	+	0	ID=GCA000153685_01610;Name=putative protein Rv1518;locus_tag=GCA000153685_01610;product=putative protein Rv1518;Dbxref=GO:0005886;Parent=GCA000153685_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407655.1,SO:0001217,UniParc:UPI000013AD04,UniRef:UniRef100_P9WLV9,UniRef:UniRef50_P9WLV9,UniRef:UniRef90_P9WLV9
contig_1	Pyrodigal	gene	1711950	1712990	.	+	.	ID=GCA000153685_01611_gene;locus_tag=GCA000153685_01611
contig_1	Pyrodigal	CDS	1711950	1712990	.	+	0	ID=GCA000153685_01611;Name=putative protein Rv1520;locus_tag=GCA000153685_01611;product=putative protein Rv1520;Dbxref=GO:0005886,GO:0009274,GO:0016757;Parent=GCA000153685_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407657.1,SO:0001217,UniParc:UPI000013AD0A,UniRef:UniRef100_P9WLV5,UniRef:UniRef50_P9WLV5,UniRef:UniRef90_P9WLV5
contig_1	Pyrodigal	gene	1712979	1713179	.	-	.	ID=GCA000153685_01612_gene;locus_tag=GCA000153685_01612
contig_1	Pyrodigal	CDS	1712979	1713179	.	-	0	ID=GCA000153685_01612;Name=hypothetical protein;locus_tag=GCA000153685_01612;product=hypothetical protein;Parent=GCA000153685_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900358.1,SO:0001217,UniParc:UPI000127809F,UniRef:UniRef100_A0A0H3LD04,UniRef:UniRef50_A0A0H3LD04,UniRef:UniRef90_A0A0H3LD04
contig_1	Pyrodigal	gene	1713224	1714975	.	+	.	ID=GCA000153685_01613_gene;locus_tag=GCA000153685_01613;gene=fadD25
contig_1	Pyrodigal	CDS	1713224	1714975	.	+	0	ID=GCA000153685_01613;Name=Putative fatty-acid--CoA ligase fadD25;locus_tag=GCA000153685_01613;product=Putative fatty-acid--CoA ligase fadD25;Dbxref=GO:0005886,GO:0006633,GO:0016874,GO:0070566;gene=fadD25;Parent=GCA000153685_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900359.1,SO:0001217,UniParc:UPI00012780A0,UniRef:UniRef100_A0A0H3L9R9,UniRef:UniRef50_P9WQ47,UniRef:UniRef90_P9WQ45;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	1715094	1716881	.	-	.	ID=GCA000153685_01614_gene;locus_tag=GCA000153685_01614;gene=mmpL12
contig_1	Pyrodigal	CDS	1715094	1716881	.	-	0	ID=GCA000153685_01614;Name=putative transport protein MmpL12;locus_tag=GCA000153685_01614;product=putative transport protein MmpL12;Dbxref=GO:0005829,GO:0005886,GO:0009274,GO:0052572;gene=mmpL12;Parent=GCA000153685_01614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00030011C1,UniRef:UniRef100_A0A9P1LC78,UniRef:UniRef50_P9WJU1,UniRef:UniRef90_P9WJT7
contig_1	Pyrodigal	gene	1716939	1717823	.	-	.	ID=GCA000153685_01615_gene;locus_tag=GCA000153685_01615;gene=tnp
contig_1	Pyrodigal	CDS	1716939	1717823	.	-	0	ID=GCA000153685_01615;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_01615;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	1717874	1718200	.	-	.	ID=GCA000153685_01616_gene;locus_tag=GCA000153685_01616;gene=tnp
contig_1	Pyrodigal	CDS	1717874	1718200	.	-	0	ID=GCA000153685_01616;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_01616;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	1718249	1719988	.	-	.	ID=GCA000153685_01617_gene;locus_tag=GCA000153685_01617;gene=mmpL8
contig_1	Pyrodigal	CDS	1718249	1719988	.	-	0	ID=GCA000153685_01617;Name=Membrane transport protein mmpL8;locus_tag=GCA000153685_01617;product=Membrane transport protein mmpL8;gene=mmpL8;Parent=GCA000153685_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A654TAK2,UniRef:UniRef90_A0AA44RKT7
contig_1	Pyrodigal	gene	1720191	1720976	.	+	.	ID=GCA000153685_01618_gene;locus_tag=GCA000153685_01618
contig_1	Pyrodigal	CDS	1720191	1720976	.	+	0	ID=GCA000153685_01618;Name=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;locus_tag=GCA000153685_01618;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;Dbxref=GO:0008757,GO:0071770;Parent=GCA000153685_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE566,UniRef:UniRef100_A0A0H3L950,UniRef:UniRef50_A0A1A2SI20,UniRef:UniRef90_A0A654TA97;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1721006	1722250	.	+	.	ID=GCA000153685_01619_gene;locus_tag=GCA000153685_01619
contig_1	Pyrodigal	CDS	1721006	1722250	.	+	0	ID=GCA000153685_01619;Name=putative glycosyltransferase Mb1551;locus_tag=GCA000153685_01619;product=putative glycosyltransferase Mb1551;Dbxref=GO:0005975,GO:0008194,GO:0016758,GO:0030259,GO:0033072;Parent=GCA000153685_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407671.1,SO:0001217,UniParc:UPI000013AD15,UniRef:UniRef100_P9WN07,UniRef:UniRef50_Q49929,UniRef:UniRef90_P9WN07;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	1722297	1723082	.	+	.	ID=GCA000153685_01620_gene;locus_tag=GCA000153685_01620;gene=wbbL2
contig_1	Pyrodigal	CDS	1722297	1723082	.	+	0	ID=GCA000153685_01620;Name=putative protein Mb1552;locus_tag=GCA000153685_01620;product=putative protein Mb1552;gene=wbbL2;Parent=GCA000153685_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407672.1,SO:0001217,UniParc:UPI000013AD17,UniRef:UniRef100_P9WLV3,UniRef:UniRef50_P9WLV3,UniRef:UniRef90_P9WLV3
contig_1	Pyrodigal	gene	1723060	1724340	.	-	.	ID=GCA000153685_01621_gene;locus_tag=GCA000153685_01621
contig_1	Pyrodigal	CDS	1723060	1724340	.	-	0	ID=GCA000153685_01621;Name=putative protein Mb1553c;locus_tag=GCA000153685_01621;product=putative protein Mb1553c;Dbxref=GO:0005975,GO:0008194,GO:0016758,GO:0030259,GO:0033072;Parent=GCA000153685_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407676.1,SO:0001217,UniParc:UPI000013AD19,UniRef:UniRef100_P9WLV1,UniRef:UniRef50_P9WLV1,UniRef:UniRef90_P9WLV1
contig_1	Pyrodigal	gene	1724363	1730665	.	-	.	ID=GCA000153685_01622_gene;locus_tag=GCA000153685_01622;gene=pks2
contig_1	Pyrodigal	CDS	1724363	1730665	.	-	0	ID=GCA000153685_01622;Name=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;locus_tag=GCA000153685_01622;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0016491,GO:0031177,GO:0071770;gene=pks2;Parent=GCA000153685_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004B64AE7,UniRef:UniRef100_A0AA44LNR2,UniRef:UniRef50_P9WQE9,UniRef:UniRef90_O53901;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1731233	1731673	.	-	.	ID=GCA000153685_01623_gene;locus_tag=GCA000153685_01623;gene=papA4
contig_1	Pyrodigal	CDS	1731233	1731673	.	-	0	ID=GCA000153685_01623;Name=Conserved polyketide synthase associated protein PapA4;locus_tag=GCA000153685_01623;product=Conserved polyketide synthase associated protein PapA4;gene=papA4;Parent=GCA000153685_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A2CB,UniRef:UniRef100_A0A0H3L956,UniRef:UniRef50_A5U2N5,UniRef:UniRef90_A5U2N5
contig_1	Pyrodigal	gene	1731782	1733536	.	+	.	ID=GCA000153685_01624_gene;locus_tag=GCA000153685_01624
contig_1	Pyrodigal	CDS	1731782	1733536	.	+	0	ID=GCA000153685_01624;Name=putative fatty-acid-CoA ligase fadD24;locus_tag=GCA000153685_01624;product=putative fatty-acid-CoA ligase fadD24;Parent=GCA000153685_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12427,RefSeq:WP_003898920.1,SO:0001217,UniParc:UPI00000D5FE3,UniRef:UniRef100_A5U2N6,UniRef:UniRef50_A0A448ICR6,UniRef:UniRef90_A0A0H3M520;ec_number=6.2.1.49
contig_1	Pyrodigal	gene	1733653	1734756	.	+	.	ID=GCA000153685_01625_gene;locus_tag=GCA000153685_01625;gene=adh
contig_1	Pyrodigal	CDS	1733653	1734756	.	+	0	ID=GCA000153685_01625;Name=putative alcohol dehydrogenase adh;locus_tag=GCA000153685_01625;product=putative alcohol dehydrogenase adh;Dbxref=GO:0004022,GO:0008270;gene=adh;Parent=GCA000153685_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407690.1,SO:0001217,UniParc:UPI00000D5FE9,UniRef:UniRef100_P9WQC3,UniRef:UniRef50_P9WQC3,UniRef:UniRef90_P9WQC3;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	1734753	1735319	.	+	.	ID=GCA000153685_01626_gene;locus_tag=GCA000153685_01626
contig_1	Pyrodigal	CDS	1734753	1735319	.	+	0	ID=GCA000153685_01626;Name=Conserved protein;locus_tag=GCA000153685_01626;product=Conserved protein;Parent=GCA000153685_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407692.1,SO:0001217,UniParc:UPI00000D0FD0,UniRef:UniRef100_O53905,UniRef:UniRef50_A0A7I7KQZ4,UniRef:UniRef90_O53905
contig_1	Pyrodigal	gene	1735396	1735830	.	-	.	ID=GCA000153685_01627_gene;locus_tag=GCA000153685_01627
contig_1	Pyrodigal	CDS	1735396	1735830	.	-	0	ID=GCA000153685_01627;Name=Thioesterase domain-containing protein;locus_tag=GCA000153685_01627;product=Thioesterase domain-containing protein;Parent=GCA000153685_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407695.1,SO:0001217,UniParc:UPI00000D10AA,UniRef:UniRef100_O06178,UniRef:UniRef50_O06178,UniRef:UniRef90_O06178
contig_1	Pyrodigal	gene	1735890	1737017	.	+	.	ID=GCA000153685_01628_gene;locus_tag=GCA000153685_01628
contig_1	Pyrodigal	CDS	1735890	1737017	.	+	0	ID=GCA000153685_01628;Name=Putative monooxygenase Rv1533;locus_tag=GCA000153685_01628;product=Putative monooxygenase Rv1533;Dbxref=GO:0018580;Parent=GCA000153685_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898921.1,SO:0001217,UniParc:UPI00000C0994,UniRef:UniRef100_O06179,UniRef:UniRef50_O06179,UniRef:UniRef90_O06179;ec_number=1.13.12.-
contig_1	Pyrodigal	gene	1737014	1737691	.	+	.	ID=GCA000153685_01629_gene;locus_tag=GCA000153685_01629
contig_1	Pyrodigal	CDS	1737014	1737691	.	+	0	ID=GCA000153685_01629;Name=Transcriptional regulator;locus_tag=GCA000153685_01629;product=Transcriptional regulator;Parent=GCA000153685_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407700.1,SO:0001217,UniParc:UPI00000D5F7B,UniRef:UniRef100_A5U2P1,UniRef:UniRef50_A0A0I9TT29,UniRef:UniRef90_A5U2P1
contig_1	Infernal	regulatory_region	1737789	1737958	2.4e-24	+	.	ID=FNJOPAJJMO_73;Name=M-box riboswitch aptamer (ykoK leader);product=M-box riboswitch aptamer (ykoK leader);Dbxref=RFAM:RF00380;inference=profile:Rfam:RF00380;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1738256	1738492	.	+	.	ID=GCA000153685_01630_gene;locus_tag=GCA000153685_01630
contig_1	Pyrodigal	CDS	1738256	1738492	.	+	0	ID=GCA000153685_01630;Name=Rv1535 family protein;locus_tag=GCA000153685_01630;product=Rv1535 family protein;Parent=GCA000153685_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407710.1,SO:0001217,UniParc:UPI00000D1150,UniRef:UniRef100_O06180,UniRef:UniRef50_A0A1X0KEU3,UniRef:UniRef90_O06180
contig_1	Pyrodigal	gene	1738799	1741924	.	+	.	ID=GCA000153685_01631_gene;locus_tag=GCA000153685_01631;gene=ileS
contig_1	Pyrodigal	CDS	1738799	1741924	.	+	0	ID=GCA000153685_01631;Name=isoleucine--tRNA ligase;locus_tag=GCA000153685_01631;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005737,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000153685_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407714.1,SO:0001217,UniParc:UPI00001364FA,UniRef:UniRef100_P9WFV3,UniRef:UniRef50_P9WFV3,UniRef:UniRef90_P9WFV3;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	1742136	1743527	.	+	.	ID=GCA000153685_01632_gene;locus_tag=GCA000153685_01632
contig_1	Pyrodigal	CDS	1742136	1743527	.	+	0	ID=GCA000153685_01632;Name=DNA polymerase IV;locus_tag=GCA000153685_01632;product=DNA polymerase IV;Dbxref=GO:0003887,GO:0006260;Parent=GCA000153685_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904641.1,SO:0001217,UniParc:UPI0000165294,UniRef:UniRef100_A0A679LG06,UniRef:UniRef50_P9WNT3,UniRef:UniRef90_A0A679LG06;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1743492	1744457	.	-	.	ID=GCA000153685_01633_gene;locus_tag=GCA000153685_01633;gene=ansA
contig_1	Pyrodigal	CDS	1743492	1744457	.	-	0	ID=GCA000153685_01633;Name=L-asparaginase;locus_tag=GCA000153685_01633;product=L-asparaginase;Dbxref=GO:0004067,GO:0005576,GO:0006528;gene=ansA;Parent=GCA000153685_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D2AA,UniRef:UniRef100_A0A0H3L968,UniRef:UniRef50_P9WPX5,UniRef:UniRef90_P9WPX5;ec_number=3.5.1.1
contig_1	Pyrodigal	gene	1744626	1745132	.	+	.	ID=GCA000153685_01634_gene;locus_tag=GCA000153685_01634;gene=lspA
contig_1	Pyrodigal	CDS	1744626	1745132	.	+	0	ID=GCA000153685_01634;Name=signal peptidase II;locus_tag=GCA000153685_01634;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306,GO:0036211;gene=lspA;Parent=GCA000153685_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03101,SO:0001217,UniParc:UPI00005EE56D,UniRef:UniRef100_P9WK99,UniRef:UniRef50_P9WK99,UniRef:UniRef90_P9WK99;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	1745167	1746051	.	+	.	ID=GCA000153685_01635_gene;locus_tag=GCA000153685_01635
contig_1	Pyrodigal	CDS	1745167	1746051	.	+	0	ID=GCA000153685_01635;Name=putative RNA pseudouridine synthase Mb1567;locus_tag=GCA000153685_01635;product=putative RNA pseudouridine synthase Mb1567;Dbxref=GO:0000455,GO:0003723,GO:0120159;Parent=GCA000153685_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06180,SO:0001217,UniParc:UPI00005EE56E,UniRef:UniRef100_P9WHQ3,UniRef:UniRef50_P9WHQ3,UniRef:UniRef90_P9WHQ3;ec_number=5.4.99.-
contig_1	Pyrodigal	gene	1746058	1746651	.	-	.	ID=GCA000153685_01636_gene;locus_tag=GCA000153685_01636;gene=lprI
contig_1	Pyrodigal	CDS	1746058	1746651	.	-	0	ID=GCA000153685_01636;Name=Lipoprotein LprI;locus_tag=GCA000153685_01636;product=Lipoprotein LprI;Dbxref=GO:0005576,GO:0005886,GO:0009986;gene=lprI;Parent=GCA000153685_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407725.1,SO:0001217,UniParc:UPI000012E887,UniRef:UniRef100_P9WK41,UniRef:UniRef50_P9WK41,UniRef:UniRef90_P9WK41
contig_1	Pyrodigal	gene	1746706	1747116	.	-	.	ID=GCA000153685_01637_gene;locus_tag=GCA000153685_01637;gene=glbN
contig_1	Pyrodigal	CDS	1746706	1747116	.	-	0	ID=GCA000153685_01637;Name=group 1 truncated hemoglobin GlbN;locus_tag=GCA000153685_01637;product=group 1 truncated hemoglobin GlbN;Dbxref=GO:0005344,GO:0005737,GO:0005829,GO:0008379,GO:0008941,GO:0019825,GO:0020037,GO:0034599,GO:0045454,GO:0046210,GO:0046872,GO:0051410;gene=glbN;Parent=GCA000153685_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407730,RefSeq:WP_003407730.1,SO:0001217,UniParc:UPI0000111D3C,UniRef:UniRef100_P9WN25,UniRef:UniRef50_P9WN25,UniRef:UniRef90_P9WN25
contig_1	Pyrodigal	gene	1747344	1748369	.	+	.	ID=GCA000153685_01638_gene;locus_tag=GCA000153685_01638;gene=yqjQ
contig_1	Pyrodigal	CDS	1747344	1748369	.	+	0	ID=GCA000153685_01638;Name=putative oxidoreductase Rv1543;locus_tag=GCA000153685_01638;product=putative oxidoreductase Rv1543;Dbxref=GO:0005886,GO:0009274,GO:0016020,GO:0016491;gene=yqjQ;Parent=GCA000153685_01638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0300,COG:R,RefSeq:WP_003407734.1,SO:0001217,UniParc:UPI000013AD33,UniRef:UniRef100_P9WGS1,UniRef:UniRef50_P9WGS1,UniRef:UniRef90_P9WGS1;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1748374	1749177	.	+	.	ID=GCA000153685_01639_gene;locus_tag=GCA000153685_01639
contig_1	Pyrodigal	CDS	1748374	1749177	.	+	0	ID=GCA000153685_01639;Name=putative ketoacyl reductase;locus_tag=GCA000153685_01639;product=putative ketoacyl reductase;Parent=GCA000153685_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407737.1,SO:0001217,UniParc:UPI00000D1235,UniRef:UniRef100_Q10782,UniRef:UniRef50_A0A0I9ULH2,UniRef:UniRef90_Q10782
contig_1	Pyrodigal	gene	1749238	1749471	.	-	.	ID=GCA000153685_01640_gene;locus_tag=GCA000153685_01640
contig_1	Pyrodigal	CDS	1749238	1749471	.	-	0	ID=GCA000153685_01640;Name=hypothetical protein;locus_tag=GCA000153685_01640;product=hypothetical protein;Parent=GCA000153685_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E6B2D0,UniRef:UniRef100_A0A0E8NS67,UniRef:UniRef50_A0A0E8NS67,UniRef:UniRef90_A0A0E8NS67
contig_1	Pyrodigal	gene	1749475	1749906	.	+	.	ID=GCA000153685_01641_gene;locus_tag=GCA000153685_01641
contig_1	Pyrodigal	CDS	1749475	1749906	.	+	0	ID=GCA000153685_01641;Name=putative protein Mb1573;locus_tag=GCA000153685_01641;product=putative protein Mb1573;Dbxref=GO:0005886;Parent=GCA000153685_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407748.1,SO:0001217,UniParc:UPI000013AD3C,UniRef:UniRef100_P9WLU7,UniRef:UniRef50_P9WLU7,UniRef:UniRef90_P9WLU7
contig_1	Pyrodigal	gene	1749974	1753528	.	+	.	ID=GCA000153685_01642_gene;locus_tag=GCA000153685_01642;gene=dnaE
contig_1	Pyrodigal	CDS	1749974	1753528	.	+	0	ID=GCA000153685_01642;Name=DNA polymerase III subunit alpha;locus_tag=GCA000153685_01642;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0005886,GO:0006260,GO:0008408,GO:0009274;gene=dnaE;Parent=GCA000153685_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,KEGG:K02337,RefSeq:WP_003407751.1,SO:0001217,UniParc:UPI00001296DA,UniRef:UniRef100_P9WNT7,UniRef:UniRef50_P9WNT7,UniRef:UniRef90_P9WNT7;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1753577	1755859	.	-	.	ID=GCA000153685_01643_gene;locus_tag=GCA000153685_01643
contig_1	Pyrodigal	CDS	1753577	1755859	.	-	0	ID=GCA000153685_01643;Name=hypothetical protein;locus_tag=GCA000153685_01643;product=hypothetical protein;Parent=GCA000153685_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF01469.24
contig_1	Pyrodigal	gene	1755887	1756318	.	+	.	ID=GCA000153685_01644_gene;locus_tag=GCA000153685_01644
contig_1	Pyrodigal	CDS	1755887	1756318	.	+	0	ID=GCA000153685_01644;Name=putative protein Rv1549;locus_tag=GCA000153685_01644;product=putative protein Rv1549;Parent=GCA000153685_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B469E0,UniRef:UniRef100_P9WLU4,UniRef:UniRef50_P9WLU4,UniRef:UniRef90_P9WLU4
contig_1	Pyrodigal	gene	1756324	1757712	.	+	.	ID=GCA000153685_01645_gene;locus_tag=GCA000153685_01645;gene=fadD11
contig_1	Pyrodigal	CDS	1756324	1757712	.	+	0	ID=GCA000153685_01645;Name=Putative fatty-acid--CoA ligase fadD11;locus_tag=GCA000153685_01645;product=Putative fatty-acid--CoA ligase fadD11;Dbxref=GO:0004467,GO:0005886,GO:0009274,GO:0016405;gene=fadD11;Parent=GCA000153685_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE572,UniRef:UniRef100_A0A0H3LD35,UniRef:UniRef50_P9WQ53,UniRef:UniRef90_P9WQ53;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	1757726	1759591	.	+	.	ID=GCA000153685_01646_gene;locus_tag=GCA000153685_01646;gene=plsB1
contig_1	Pyrodigal	CDS	1757726	1759591	.	+	0	ID=GCA000153685_01646;Name=lysophospholipid acyltransferase;locus_tag=GCA000153685_01646;product=lysophospholipid acyltransferase;Dbxref=GO:0003824,GO:0004366,GO:0005886,GO:0008654,GO:0009274;gene=plsB1;Parent=GCA000153685_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00631,RefSeq:WP_003407762.1,SO:0001217,UniParc:UPI0000131C26,UniRef:UniRef100_P9WI59,UniRef:UniRef50_P9WI59,UniRef:UniRef90_P9WI59;ec_number=2.3.1.15
contig_1	Pyrodigal	gene	1759719	1759952	.	+	.	ID=GCA000153685_01647_gene;locus_tag=GCA000153685_01647
contig_1	Pyrodigal	CDS	1759719	1759952	.	+	0	ID=GCA000153685_01647;Name=Fumarate reductase;locus_tag=GCA000153685_01647;product=Fumarate reductase;Parent=GCA000153685_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407763.1,SO:0001217,UniParc:UPI0001902251,UniRef:UniRef100_A0A0H3LFU0,UniRef:UniRef50_A0A1V2QHT5,UniRef:UniRef90_A0A0H3LFU0
contig_1	Pyrodigal	gene	1759962	1761713	.	+	.	ID=GCA000153685_01648_gene;locus_tag=GCA000153685_01648;gene=frdA
contig_1	Pyrodigal	CDS	1759962	1761713	.	+	0	ID=GCA000153685_01648;Name=fumarate reductase (quinol) flavoprotein subunit;locus_tag=GCA000153685_01648;product=fumarate reductase (quinol) flavoprotein subunit;Dbxref=GO:0000104,GO:0005886,GO:0008177,GO:0009055,GO:0009061,GO:0022900,GO:0050660;gene=frdA;Parent=GCA000153685_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898925.1,SO:0001217,UniParc:UPI000012ABDD,UniRef:UniRef100_P9WN91,UniRef:UniRef50_P00363,UniRef:UniRef90_P9WN91;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	1761716	1762459	.	+	.	ID=GCA000153685_01649_gene;locus_tag=GCA000153685_01649
contig_1	Pyrodigal	CDS	1761716	1762459	.	+	0	ID=GCA000153685_01649;Name=succinate dehydrogenase;locus_tag=GCA000153685_01649;product=succinate dehydrogenase;Parent=GCA000153685_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900366.1,SO:0001217,UniParc:UPI0001278104,UniRef:UniRef100_A0A0H3L985,UniRef:UniRef50_A0A7J9Y3Z2,UniRef:UniRef90_A0A0H3L985
contig_1	Pyrodigal	gene	1762456	1762836	.	+	.	ID=GCA000153685_01650_gene;locus_tag=GCA000153685_01650;gene=frdC
contig_1	Pyrodigal	CDS	1762456	1762836	.	+	0	ID=GCA000153685_01650;Name=fumarate reductase subunit C;locus_tag=GCA000153685_01650;product=fumarate reductase subunit C;Dbxref=GO:0000104,GO:0005886;gene=frdC;Parent=GCA000153685_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00246,RefSeq:WP_003407768.1,SO:0001217,UniParc:UPI0000165055,UniRef:UniRef100_P9WN89,UniRef:UniRef50_P9WN89,UniRef:UniRef90_P9WN89;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	1762833	1763210	.	+	.	ID=GCA000153685_01651_gene;locus_tag=GCA000153685_01651;gene=frdD
contig_1	Pyrodigal	CDS	1762833	1763210	.	+	0	ID=GCA000153685_01651;Name=fumarate reductase subunit FrdD;locus_tag=GCA000153685_01651;product=fumarate reductase subunit FrdD;Dbxref=GO:0000104,GO:0005886,GO:0006106;gene=frdD;Parent=GCA000153685_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00247,RefSeq:WP_003407771.1,SO:0001217,UniParc:UPI000012ABEF,UniRef:UniRef100_P9WNB5,UniRef:UniRef50_P9WNB5,UniRef:UniRef90_P9WNB5;ec_number=1.3.5.1
contig_1	Pyrodigal	gene	1763359	1763886	.	+	.	ID=GCA000153685_01652_gene;locus_tag=GCA000153685_01652
contig_1	Pyrodigal	CDS	1763359	1763886	.	+	0	ID=GCA000153685_01652;Name=putative HTH-type transcriptional regulator Mb1581;locus_tag=GCA000153685_01652;product=putative HTH-type transcriptional regulator Mb1581;Dbxref=GO:0000976,GO:0003700;Parent=GCA000153685_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE576,UniRef:UniRef100_A0A0E7W9E0,UniRef:UniRef50_P9WMD1,UniRef:UniRef90_P9WMD1
contig_1	Pyrodigal	gene	1764040	1765218	.	+	.	ID=GCA000153685_01653_gene;locus_tag=GCA000153685_01653;gene=mmpL6
contig_1	Pyrodigal	CDS	1764040	1765218	.	+	0	ID=GCA000153685_01653;Name=putative transport protein MmpL6;locus_tag=GCA000153685_01653;product=putative transport protein MmpL6;Dbxref=GO:0005886;gene=mmpL6;Parent=GCA000153685_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE577,UniRef:UniRef100_A0A0E9AMX9,UniRef:UniRef50_P9WJU9,UniRef:UniRef90_P9WJU9
contig_1	Pyrodigal	gene	1765228	1765674	.	+	.	ID=GCA000153685_01654_gene;locus_tag=GCA000153685_01654
contig_1	Pyrodigal	CDS	1765228	1765674	.	+	0	ID=GCA000153685_01654;Name=F420H(2)-dependent quinone reductase;locus_tag=GCA000153685_01654;product=F420H(2)-dependent quinone reductase;Dbxref=GO:0005886,GO:0016491,GO:0070967;Parent=GCA000153685_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003406364,BlastRules:WP_003407780,KEGG:K00540,RefSeq:WP_003407780.1,SO:0001217,UniParc:UPI000013AD54,UniRef:UniRef100_P9WP11,UniRef:UniRef50_P9WP11,UniRef:UniRef90_P9WP11;ec_number=1.1.98.-
contig_1	Pyrodigal	gene	1765709	1766998	.	+	.	ID=GCA000153685_01655_gene;locus_tag=GCA000153685_01655;gene=ilvA
contig_1	Pyrodigal	CDS	1765709	1766998	.	+	0	ID=GCA000153685_01655;Name=threonine ammonia-lyase;locus_tag=GCA000153685_01655;product=threonine ammonia-lyase;Dbxref=GO:0003941,GO:0004794,GO:0005886,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000153685_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_003407781.1,SO:0001217,UniParc:UPI0000136D4C,UniRef:UniRef100_P9WG95,UniRef:UniRef50_P9WG95,UniRef:UniRef90_P9WG95;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	1767051	1767254	.	+	.	ID=GCA000153685_01656_gene;locus_tag=GCA000153685_01656;gene=vapB11
contig_1	Pyrodigal	CDS	1767051	1767254	.	+	0	ID=GCA000153685_01656;Name=putative protein Mb1586;locus_tag=GCA000153685_01656;product=putative protein Mb1586;Dbxref=GO:0045727,GO:0075136,GO:0097351,GO:0098754;gene=vapB11;Parent=GCA000153685_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009935474.1,SO:0001217,UniParc:UPI00005EE578,UniRef:UniRef100_P9WLU3,UniRef:UniRef50_P9WLU3,UniRef:UniRef90_P9WLU3
contig_1	Pyrodigal	gene	1767260	1767664	.	+	.	ID=GCA000153685_01657_gene;locus_tag=GCA000153685_01657;gene=vapC11
contig_1	Pyrodigal	CDS	1767260	1767664	.	+	0	ID=GCA000153685_01657;Name=type II toxin-antitoxin system toxin ribonuclease VapC11;locus_tag=GCA000153685_01657;product=type II toxin-antitoxin system toxin ribonuclease VapC11;Dbxref=GO:0000287,GO:0004540;gene=vapC11;Parent=GCA000153685_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407786,RefSeq:WP_003407786.1,SO:0001217,UniParc:UPI000013AD5B,UniRef:UniRef100_P9WFA5,UniRef:UniRef50_P9WFA5,UniRef:UniRef90_P9WFA5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1767681	1769423	.	-	.	ID=GCA000153685_01658_gene;locus_tag=GCA000153685_01658;gene=treZ
contig_1	Pyrodigal	CDS	1767681	1769423	.	-	0	ID=GCA000153685_01658;Name=malto-oligosyltrehalose trehalohydrolase;locus_tag=GCA000153685_01658;product=malto-oligosyltrehalose trehalohydrolase;Dbxref=GO:0005829,GO:0005992,GO:0030980,GO:0033942;gene=treZ;Parent=GCA000153685_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01236,RefSeq:WP_003407788.1,SO:0001217,UniParc:UPI000013735D,UniRef:UniRef100_P9WQ23,UniRef:UniRef50_P9WQ23,UniRef:UniRef90_P9WQ23;ec_number=3.2.1.141
contig_1	Pyrodigal	gene	1769416	1771713	.	-	.	ID=GCA000153685_01659_gene;locus_tag=GCA000153685_01659;gene=treY
contig_1	Pyrodigal	CDS	1769416	1771713	.	-	0	ID=GCA000153685_01659;Name=malto-oligosyltrehalose synthase;locus_tag=GCA000153685_01659;product=malto-oligosyltrehalose synthase;Dbxref=GO:0005829,GO:0005992,GO:0030980,GO:0047470;gene=treY;Parent=GCA000153685_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06044,RefSeq:WP_003407790.1,SO:0001217,UniParc:UPI0000137359,UniRef:UniRef100_P9WQ21,UniRef:UniRef50_P9WQ21,UniRef:UniRef90_P9WQ21;ec_number=5.4.99.15
contig_1	Pyrodigal	gene	1771717	1773882	.	-	.	ID=GCA000153685_01660_gene;locus_tag=GCA000153685_01660;gene=glgX
contig_1	Pyrodigal	CDS	1771717	1773882	.	-	0	ID=GCA000153685_01660;Name=glycogen debranching protein GlgX;locus_tag=GCA000153685_01660;product=glycogen debranching protein GlgX;Dbxref=GO:0004133,GO:0004553,GO:0005980;gene=glgX;Parent=GCA000153685_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01214,RefSeq:WP_003898930.1,SO:0001217,UniParc:UPI000012B5E4,UniRef:UniRef100_P9WQ25,UniRef:UniRef50_P9WQ25,UniRef:UniRef90_P9WQ25;ec_number=3.2.1.196
contig_1	Pyrodigal	gene	1773921	1776110	.	-	.	ID=GCA000153685_01661_gene;locus_tag=GCA000153685_01661
contig_1	Pyrodigal	CDS	1773921	1776110	.	-	0	ID=GCA000153685_01661;Name=Acyltransferase;locus_tag=GCA000153685_01661;product=Acyltransferase;Parent=GCA000153685_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407794.1,SO:0001217,UniParc:UPI00000D6012,UniRef:UniRef100_A0A1R3XYP2,UniRef:UniRef50_A0A375Z2J6,UniRef:UniRef90_R4MDF0
contig_1	Pyrodigal	gene	1776209	1776901	.	-	.	ID=GCA000153685_01662_gene;locus_tag=GCA000153685_01662;gene=ripD
contig_1	Pyrodigal	CDS	1776209	1776901	.	-	0	ID=GCA000153685_01662;Name=NlpC/P60 family peptidoglycan-binding protein RipD;locus_tag=GCA000153685_01662;product=NlpC/P60 family peptidoglycan-binding protein RipD;gene=ripD;Parent=GCA000153685_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407798.1,SO:0001217,UniParc:UPI0000165295,UniRef:UniRef100_O06624,UniRef:UniRef50_A0A3S4CVI1,UniRef:UniRef90_O06624
contig_1	Pyrodigal	gene	1777141	1777590	.	-	.	ID=GCA000153685_01663_gene;locus_tag=GCA000153685_01663
contig_1	Pyrodigal	CDS	1777141	1777590	.	-	0	ID=GCA000153685_01663;Name=Transmembrane protein;locus_tag=GCA000153685_01663;product=Transmembrane protein;Parent=GCA000153685_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911567.1,SO:0001217,UniParc:UPI0001D31758,UniRef:UniRef100_A0A0H3L8S8,UniRef:UniRef50_A0A0H3L8S8,UniRef:UniRef90_A0A0H3L8S8
contig_1	Pyrodigal	gene	1777607	1778986	.	+	.	ID=GCA000153685_01664_gene;locus_tag=GCA000153685_01664;gene=bioA
contig_1	Pyrodigal	CDS	1777607	1778986	.	+	0	ID=GCA000153685_01664;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000153685_01664;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170;gene=bioA;Parent=GCA000153685_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031FCE23,UniRef:UniRef100_P9WQ81,UniRef:UniRef50_P9WQ81,UniRef:UniRef90_P9WQ81;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	1778983	1780143	.	+	.	ID=GCA000153685_01665_gene;locus_tag=GCA000153685_01665;gene=bioF1
contig_1	Pyrodigal	CDS	1778983	1780143	.	+	0	ID=GCA000153685_01665;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000153685_01665;product=8-amino-7-oxononanoate synthase;Dbxref=GO:0008710,GO:0009102,GO:0030170;gene=bioF1;Parent=GCA000153685_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407805.1,SO:0001217,UniParc:UPI000012698E,UniRef:UniRef100_P9WQ87,UniRef:UniRef50_P9WQ87,UniRef:UniRef90_P9WQ87;ec_number=2.3.1.47
contig_1	Pyrodigal	gene	1780140	1780820	.	+	.	ID=GCA000153685_01666_gene;locus_tag=GCA000153685_01666;gene=bioD
contig_1	Pyrodigal	CDS	1780140	1780820	.	+	0	ID=GCA000153685_01666;Name=dethiobiotin synthase;locus_tag=GCA000153685_01666;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0005829,GO:0009102;gene=bioD;Parent=GCA000153685_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01935,RefSeq:WP_003407806.1,SO:0001217,UniParc:UPI0000165057,UniRef:UniRef100_O52587,UniRef:UniRef50_P9WPQ5,UniRef:UniRef90_P9WPQ5;ec_number=6.3.3.3
contig_1	Pyrodigal	gene	1780820	1781329	.	+	.	ID=GCA000153685_01667_gene;locus_tag=GCA000153685_01667
contig_1	Pyrodigal	CDS	1780820	1781329	.	+	0	ID=GCA000153685_01667;Name=2'-5' RNA ligase family protein;locus_tag=GCA000153685_01667;product=2'-5' RNA ligase family protein;Parent=GCA000153685_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900369.1,SO:0001217,UniParc:UPI000127813B,UniRef:UniRef100_A0A0H3LFW1,UniRef:UniRef50_A0A498QR25,UniRef:UniRef90_A0A0H3LFW1
contig_1	Pyrodigal	gene	1781475	1782437	.	-	.	ID=GCA000153685_01668_gene;locus_tag=GCA000153685_01668
contig_1	Pyrodigal	CDS	1781475	1782437	.	-	0	ID=GCA000153685_01668;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_01668;product=HNH nuclease domain-containing protein;Parent=GCA000153685_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE57C,UniRef:UniRef100_A0AA44LMK4,UniRef:UniRef50_Q50655,UniRef:UniRef90_Q50655
contig_1	Pyrodigal	gene	1783270	1784367	.	+	.	ID=GCA000153685_01669_gene;locus_tag=GCA000153685_01669;gene=bioB
contig_1	Pyrodigal	CDS	1783270	1784367	.	+	0	ID=GCA000153685_01669;Name=biotin synthase BioB;locus_tag=GCA000153685_01669;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0005886,GO:0009102,GO:0009274,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000153685_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,SO:0001217,UniParc:UPI00005EE57D,UniRef:UniRef100_A0A0H3LD79,UniRef:UniRef50_P9WPQ7,UniRef:UniRef90_P9WPQ7;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	1784368	1784607	.	+	.	ID=GCA000153685_01670_gene;locus_tag=GCA000153685_01670;gene=bsaP
contig_1	Pyrodigal	CDS	1784368	1784607	.	+	0	ID=GCA000153685_01670;Name=Biotin synthase auxiliary protein;locus_tag=GCA000153685_01670;product=Biotin synthase auxiliary protein;Dbxref=GO:0009102,GO:0046872,GO:0051536,GO:0052167;gene=bsaP;Parent=GCA000153685_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407914.1,SO:0001217,UniParc:UPI000013ADA7,UniRef:UniRef100_P9WLT7,UniRef:UniRef50_P9WLT7,UniRef:UniRef90_P9WLT7
contig_1	Pyrodigal	gene	1784604	1785269	.	+	.	ID=GCA000153685_01671_gene;locus_tag=GCA000153685_01671
contig_1	Pyrodigal	CDS	1784604	1785269	.	+	0	ID=GCA000153685_01671;Name=putative protein Rv1591;locus_tag=GCA000153685_01671;product=putative protein Rv1591;Dbxref=GO:0005576,GO:0005886;Parent=GCA000153685_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407924.1,SO:0001217,UniParc:UPI000016529A,UniRef:UniRef100_A5U2U7,UniRef:UniRef50_P9WLT5,UniRef:UniRef90_P9WLT5
contig_1	Pyrodigal	gene	1785434	1786774	.	-	.	ID=GCA000153685_01672_gene;locus_tag=GCA000153685_01672
contig_1	Pyrodigal	CDS	1785434	1786774	.	-	0	ID=GCA000153685_01672;Name=putative inactive lipase Rv1592c;locus_tag=GCA000153685_01672;product=putative inactive lipase Rv1592c;Dbxref=GO:0004806,GO:0016042;Parent=GCA000153685_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407926.1,SO:0001217,UniParc:UPI00001A9013,UniRef:UniRef100_P9WK88,UniRef:UniRef50_P9WK89,UniRef:UniRef90_P9WK89
contig_1	Pyrodigal	gene	1787031	1787741	.	-	.	ID=GCA000153685_01673_gene;locus_tag=GCA000153685_01673
contig_1	Pyrodigal	CDS	1787031	1787741	.	-	0	ID=GCA000153685_01673;Name=Conserved protein;locus_tag=GCA000153685_01673;product=Conserved protein;Parent=GCA000153685_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898937.1,SO:0001217,UniParc:UPI00000CCB1D,UniRef:UniRef100_O06597,UniRef:UniRef50_O06597,UniRef:UniRef90_O06597
contig_1	Pyrodigal	gene	1787790	1788839	.	+	.	ID=GCA000153685_01674_gene;locus_tag=GCA000153685_01674;gene=nadA
contig_1	Pyrodigal	CDS	1787790	1788839	.	+	0	ID=GCA000153685_01674;Name=quinolinate synthase NadA;locus_tag=GCA000153685_01674;product=quinolinate synthase NadA;Dbxref=GO:0005829,GO:0008987,GO:0009274,GO:0009435,GO:0034628,GO:0046872,GO:0051539;gene=nadA;Parent=GCA000153685_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03517,RefSeq:WP_003407931.1,SO:0001217,UniParc:UPI000012FC64,UniRef:UniRef100_P9WJK1,UniRef:UniRef50_P9WJK1,UniRef:UniRef90_P9WJK1;ec_number=2.5.1.72
contig_1	Pyrodigal	gene	1788836	1790422	.	+	.	ID=GCA000153685_01675_gene;locus_tag=GCA000153685_01675;gene=nadB
contig_1	Pyrodigal	CDS	1788836	1790422	.	+	0	ID=GCA000153685_01675;Name=L-aspartate oxidase;locus_tag=GCA000153685_01675;product=L-aspartate oxidase;Dbxref=GO:0000166,GO:0005737,GO:0008734,GO:0009435,GO:0034628;gene=nadB;Parent=GCA000153685_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00278,SO:0001217,UniParc:UPI00005EE57E,UniRef:UniRef100_P9WJJ9,UniRef:UniRef50_P9WJJ9,UniRef:UniRef90_P9WJJ9;ec_number=1.4.3.16
contig_1	Pyrodigal	gene	1790422	1791279	.	+	.	ID=GCA000153685_01676_gene;locus_tag=GCA000153685_01676;gene=nadC
contig_1	Pyrodigal	CDS	1790422	1791279	.	+	0	ID=GCA000153685_01676;Name=carboxylating nicotinate-nucleotide diphosphorylase;locus_tag=GCA000153685_01676;product=carboxylating nicotinate-nucleotide diphosphorylase;Dbxref=GO:0004514,GO:0005737,GO:0005886,GO:0009274,GO:0009435,GO:0034213;gene=nadC;Parent=GCA000153685_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00767,RefSeq:WP_003898939.1,SO:0001217,UniParc:UPI000012FC9A,UniRef:UniRef100_P9WJJ7,UniRef:UniRef50_P9WJJ7,UniRef:UniRef90_P9WJJ7;ec_number=2.4.2.19
contig_1	Pyrodigal	gene	1791328	1792086	.	+	.	ID=GCA000153685_01677_gene;locus_tag=GCA000153685_01677
contig_1	Pyrodigal	CDS	1791328	1792086	.	+	0	ID=GCA000153685_01677;Name=Methyltransferase type 11 domain-containing protein;locus_tag=GCA000153685_01677;product=Methyltransferase type 11 domain-containing protein;Parent=GCA000153685_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898940.1,SO:0001217,UniParc:UPI000016505A,UniRef:UniRef100_A0A1R3XYT4,UniRef:UniRef50_O06593,UniRef:UniRef90_O06593
contig_1	Pyrodigal	gene	1792107	1792517	.	-	.	ID=GCA000153685_01678_gene;locus_tag=GCA000153685_01678
contig_1	Pyrodigal	CDS	1792107	1792517	.	-	0	ID=GCA000153685_01678;Name=Nitroreductase;locus_tag=GCA000153685_01678;product=Nitroreductase;Parent=GCA000153685_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407939.1,SO:0001217,UniParc:UPI00000D102E,UniRef:UniRef100_O06592,UniRef:UniRef50_B2HQA1,UniRef:UniRef90_R4LXN5
contig_1	Pyrodigal	gene	1792599	1793933	.	+	.	ID=GCA000153685_01679_gene;locus_tag=GCA000153685_01679;gene=hisD
contig_1	Pyrodigal	CDS	1792599	1793933	.	+	0	ID=GCA000153685_01679;Name=Histidinol dehydrogenase;locus_tag=GCA000153685_01679;product=Histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005737,GO:0005829,GO:0008270,GO:0009274,GO:0051287;gene=hisD;Parent=GCA000153685_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00013,SO:0001217,UniParc:UPI0001C54E0B,UniRef:UniRef100_P9WNW9,UniRef:UniRef50_P9WNW9,UniRef:UniRef90_P9WNW9;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	1793930	1795072	.	+	.	ID=GCA000153685_01680_gene;locus_tag=GCA000153685_01680;gene=hisC
contig_1	Pyrodigal	CDS	1793930	1795072	.	+	0	ID=GCA000153685_01680;Name=histidinol-phosphate transaminase;locus_tag=GCA000153685_01680;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0005886,GO:0009274,GO:0030170;gene=hisC;Parent=GCA000153685_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00817,RefSeq:WP_003407947.1,SO:0001217,UniParc:UPI000012C703,UniRef:UniRef100_P9WML7,UniRef:UniRef50_P9WML7,UniRef:UniRef90_P9WML7;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	1795069	1795701	.	+	.	ID=GCA000153685_01681_gene;locus_tag=GCA000153685_01681;gene=hisB
contig_1	Pyrodigal	CDS	1795069	1795701	.	+	0	ID=GCA000153685_01681;Name=imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000153685_01681;product=imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004424,GO:0005737,GO:0046872;gene=hisB;Parent=GCA000153685_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0131,COG:E,RefSeq:WP_003407950.1,SO:0001217,UniParc:UPI000012C861,UniRef:UniRef100_P9WML9,UniRef:UniRef50_P9WML9,UniRef:UniRef90_P9WML9;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	1795698	1796318	.	+	.	ID=GCA000153685_01682_gene;locus_tag=GCA000153685_01682;gene=hisH
contig_1	Pyrodigal	CDS	1795698	1796318	.	+	0	ID=GCA000153685_01682;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000153685_01682;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0009274,GO:0016829;gene=hisH;Parent=GCA000153685_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407952.1,SO:0001217,UniParc:UPI000016505C,UniRef:UniRef100_P59957,UniRef:UniRef50_P9WMM1,UniRef:UniRef90_P9WMM1;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	1796331	1797065	.	+	.	ID=GCA000153685_01683_gene;locus_tag=GCA000153685_01683;gene=priA
contig_1	Pyrodigal	CDS	1796331	1797065	.	+	0	ID=GCA000153685_01683;Name=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;locus_tag=GCA000153685_01683;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0004640,GO:0005737;gene=priA;Parent=GCA000153685_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,SO:0001217,UniParc:UPI000012C7D1,UniRef:UniRef100_P9WMM5,UniRef:UniRef50_P16250,UniRef:UniRef90_P9WMM5;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1797073	1797885	.	+	.	ID=GCA000153685_01684_gene;locus_tag=GCA000153685_01684;gene=impA
contig_1	Pyrodigal	CDS	1797073	1797885	.	+	0	ID=GCA000153685_01684;Name=putative inositol 1-monophosphatase ImpA;locus_tag=GCA000153685_01684;product=putative inositol 1-monophosphatase ImpA;Dbxref=GO:0005886,GO:0006020,GO:0006021,GO:0007165,GO:0008934,GO:0046854,GO:0046872;gene=impA;Parent=GCA000153685_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407957.1,SO:0001217,UniParc:UPI000016505D,UniRef:UniRef100_Q7D8A3,UniRef:UniRef50_O53907,UniRef:UniRef90_O53907;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	1797887	1798690	.	+	.	ID=GCA000153685_01685_gene;locus_tag=GCA000153685_01685;gene=hisF
contig_1	Pyrodigal	CDS	1797887	1798690	.	+	0	ID=GCA000153685_01685;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000153685_01685;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000153685_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0107,COG:E,RefSeq:WP_003898942.1,SO:0001217,UniParc:UPI000012C82F,UniRef:UniRef100_P9WMM3,UniRef:UniRef50_P9WMM3,UniRef:UniRef90_P9WMM3;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	1798687	1799034	.	+	.	ID=GCA000153685_01686_gene;locus_tag=GCA000153685_01686;gene=hisI
contig_1	Pyrodigal	CDS	1798687	1799034	.	+	0	ID=GCA000153685_01686;Name=phosphoribosyl-AMP cyclohydrolase;locus_tag=GCA000153685_01686;product=phosphoribosyl-AMP cyclohydrolase;Dbxref=GO:0000105,GO:0000287,GO:0004635,GO:0005737,GO:0008270;gene=hisI;Parent=GCA000153685_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003407963.1,SO:0001217,UniParc:UPI000012C7AB,UniRef:UniRef100_P9WMM7,UniRef:UniRef50_P60543,UniRef:UniRef90_P9WMM7;ec_number=3.5.4.19
contig_1	Pyrodigal	gene	1799215	1800297	.	+	.	ID=GCA000153685_01687_gene;locus_tag=GCA000153685_01687
contig_1	Pyrodigal	CDS	1799215	1800297	.	+	0	ID=GCA000153685_01687;Name=Cation/proton antiporter;locus_tag=GCA000153685_01687;product=Cation/proton antiporter;Parent=GCA000153685_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898943.1,SO:0001217,UniParc:UPI00000D5EE9,UniRef:UniRef100_A5U2W3,UniRef:UniRef50_A0A6G6WAN1,UniRef:UniRef90_A5U2W3
contig_1	Pyrodigal	gene	1800332	1800796	.	-	.	ID=GCA000153685_01688_gene;locus_tag=GCA000153685_01688;gene=bcpB
contig_1	Pyrodigal	CDS	1800332	1800796	.	-	0	ID=GCA000153685_01688;Name=peroxiredoxin BcpB;locus_tag=GCA000153685_01688;product=peroxiredoxin BcpB;Dbxref=GO:0005737,GO:0008379,GO:0034599,GO:0045454;gene=bcpB;Parent=GCA000153685_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003407974,KEGG:K03564,RefSeq:WP_003407974.1,SO:0001217,UniParc:UPI00000D5EB3,UniRef:UniRef100_P9WID9,UniRef:UniRef50_P9WID9,UniRef:UniRef90_P9WID9;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1800937	1802487	.	+	.	ID=GCA000153685_01689_gene;locus_tag=GCA000153685_01689;gene=trpE
contig_1	Pyrodigal	CDS	1800937	1802487	.	+	0	ID=GCA000153685_01689;Name=anthranilate synthase component I;locus_tag=GCA000153685_01689;product=anthranilate synthase component I;Dbxref=GO:0000162,GO:0000287,GO:0004049,GO:0005886;gene=trpE;Parent=GCA000153685_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01657,RefSeq:WP_003407977.1,SO:0001217,UniParc:UPI00001375C3,UniRef:UniRef100_P9WFX3,UniRef:UniRef50_A0QX93,UniRef:UniRef90_P9WFX3;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1802525	1803184	.	+	.	ID=GCA000153685_01690_gene;locus_tag=GCA000153685_01690
contig_1	Pyrodigal	CDS	1802525	1803184	.	+	0	ID=GCA000153685_01690;Name=putative conserved membrane protein;locus_tag=GCA000153685_01690;product=putative conserved membrane protein;Parent=GCA000153685_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE586,UniRef:UniRef100_O06128,UniRef:UniRef50_F5YTD9,UniRef:UniRef90_O06128
contig_1	Pyrodigal	gene	1803274	1804092	.	+	.	ID=GCA000153685_01691_gene;locus_tag=GCA000153685_01691;gene=trpC
contig_1	Pyrodigal	CDS	1803274	1804092	.	+	0	ID=GCA000153685_01691;Name=indole-3-glycerol phosphate synthase TrpC;locus_tag=GCA000153685_01691;product=indole-3-glycerol phosphate synthase TrpC;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpC;Parent=GCA000153685_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0134,COG:E,RefSeq:WP_003407990.1,SO:0001217,UniParc:UPI0000137552,UniRef:UniRef100_P9WFX7,UniRef:UniRef50_P9WFX7,UniRef:UniRef90_P9WFX7;ec_number=4.1.1.48
contig_1	Pyrodigal	gene	1804128	1805393	.	+	.	ID=GCA000153685_01692_gene;locus_tag=GCA000153685_01692;gene=trpB
contig_1	Pyrodigal	CDS	1804128	1805393	.	+	0	ID=GCA000153685_01692;Name=tryptophan synthase subunit beta;locus_tag=GCA000153685_01692;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA000153685_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,RefSeq:WP_016721143.1,SO:0001217,UniParc:UPI0001C54E0A,UniRef:UniRef100_P9WFX9,UniRef:UniRef50_P9WFX9,UniRef:UniRef90_P9WFX9;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1805393	1806205	.	+	.	ID=GCA000153685_01693_gene;locus_tag=GCA000153685_01693;gene=trpA
contig_1	Pyrodigal	CDS	1805393	1806205	.	+	0	ID=GCA000153685_01693;Name=tryptophan synthase subunit alpha;locus_tag=GCA000153685_01693;product=tryptophan synthase subunit alpha;Dbxref=GO:0000162,GO:0004834,GO:0005829,GO:0005886,GO:0006568;gene=trpA;Parent=GCA000153685_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01695,RefSeq:WP_003407999.1,SO:0001217,UniParc:UPI00001374E1,UniRef:UniRef100_P9WFY1,UniRef:UniRef50_P9WFY1,UniRef:UniRef90_P9WFY1;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1806202	1807611	.	+	.	ID=GCA000153685_01694_gene;locus_tag=GCA000153685_01694;gene=lgt
contig_1	Pyrodigal	CDS	1806202	1807611	.	+	0	ID=GCA000153685_01694;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000153685_01694;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0042158;gene=lgt;Parent=GCA000153685_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6225,UniRef:UniRef100_P9WK93,UniRef:UniRef50_P9WK93,UniRef:UniRef90_P9WK93;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	1808332	1808727	.	+	.	ID=GCA000153685_01695_gene;locus_tag=GCA000153685_01695
contig_1	Pyrodigal	CDS	1808332	1808727	.	+	0	ID=GCA000153685_01695;Name=TM2 domain-containing protein;locus_tag=GCA000153685_01695;product=TM2 domain-containing protein;Parent=GCA000153685_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907718.1,SO:0001217,UniParc:UPI00005EE589,UniRef:UniRef100_L7N4U9,UniRef:UniRef50_A0A1A1Y7C1,UniRef:UniRef90_L7N4U9
contig_1	Pyrodigal	gene	1808717	1809115	.	+	.	ID=GCA000153685_01696_gene;locus_tag=GCA000153685_01696
contig_1	Pyrodigal	CDS	1808717	1809115	.	+	0	ID=GCA000153685_01696;Name=DUF2752 domain-containing protein;locus_tag=GCA000153685_01696;product=DUF2752 domain-containing protein;Parent=GCA000153685_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408005.1,SO:0001217,UniParc:UPI00000D1021,UniRef:UniRef100_O06133,UniRef:UniRef50_A0A329LED1,UniRef:UniRef90_A0A0H3LFZ4
contig_1	Pyrodigal	gene	1809223	1810641	.	+	.	ID=GCA000153685_01697_gene;locus_tag=GCA000153685_01697;gene=pyk
contig_1	Pyrodigal	CDS	1809223	1810641	.	+	0	ID=GCA000153685_01697;Name=pyruvate kinase;locus_tag=GCA000153685_01697;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000153685_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0469,COG:G,KEGG:K00873,RefSeq:WP_003898945.1,SO:0001217,UniParc:UPI000012E020,UniRef:UniRef100_P9WKE5,UniRef:UniRef50_P9WKE5,UniRef:UniRef90_P9WKE5;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1810631	1811551	.	+	.	ID=GCA000153685_01698_gene;locus_tag=GCA000153685_01698;gene=tesB
contig_1	Pyrodigal	CDS	1810631	1811551	.	+	0	ID=GCA000153685_01698;Name=acyl-CoA thioesterase II;locus_tag=GCA000153685_01698;product=acyl-CoA thioesterase II;Dbxref=GO:0006637,GO:0047617;gene=tesB;Parent=GCA000153685_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF47BA,UniRef:UniRef100_A0A0H3L9D9,UniRef:UniRef50_H6MRR4,UniRef:UniRef90_A0A0H3L9D9
contig_1	Pyrodigal	gene	1811609	1813063	.	+	.	ID=GCA000153685_01699_gene;locus_tag=GCA000153685_01699;gene=lysX2
contig_1	Pyrodigal	CDS	1811609	1813063	.	+	0	ID=GCA000153685_01699;Name=MprF-like domain protein Rv1619;locus_tag=GCA000153685_01699;product=MprF-like domain protein Rv1619;Dbxref=GO:0005886,GO:0016755,GO:0055091;gene=lysX2;Parent=GCA000153685_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900378.1,SO:0001217,UniParc:UPI00000D10ED,UniRef:UniRef100_O06136,UniRef:UniRef50_O06136,UniRef:UniRef90_O06136
contig_1	Pyrodigal	gene	1812997	1814727	.	-	.	ID=GCA000153685_01700_gene;locus_tag=GCA000153685_01700;gene=cydC
contig_1	Pyrodigal	CDS	1812997	1814727	.	-	0	ID=GCA000153685_01700;Name=thiol reductant ABC exporter subunit CydC;locus_tag=GCA000153685_01700;product=thiol reductant ABC exporter subunit CydC;Dbxref=GO:0005524,GO:0016020,GO:0033228,GO:0033230,GO:0045454,GO:0050456,GO:0055051;gene=cydC;Parent=GCA000153685_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908715.1,SO:0001217,UniParc:UPI00000D1183,UniRef:UniRef100_A5U2X6,UniRef:UniRef50_A0A2G5P867,UniRef:UniRef90_A5U2X6
contig_1	Pyrodigal	gene	1814724	1816307	.	-	.	ID=GCA000153685_01701_gene;locus_tag=GCA000153685_01701;gene=cydD
contig_1	Pyrodigal	CDS	1814724	1816307	.	-	0	ID=GCA000153685_01701;Name=thiol reductant ABC exporter subunit CydD;locus_tag=GCA000153685_01701;product=thiol reductant ABC exporter subunit CydD;Dbxref=GO:0005524,GO:0016020,GO:0033228,GO:0033230,GO:0045454,GO:0050456,GO:0055051;gene=cydD;Parent=GCA000153685_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408022.1,SO:0001217,UniParc:UPI00000D5E72,UniRef:UniRef100_A5U2X7,UniRef:UniRef50_Q0S752,UniRef:UniRef90_A5U2X7
contig_1	Pyrodigal	gene	1816394	1817434	.	-	.	ID=GCA000153685_01702_gene;locus_tag=GCA000153685_01702;gene=cydB
contig_1	Pyrodigal	CDS	1816394	1817434	.	-	0	ID=GCA000153685_01702;Name=cytochrome d ubiquinol oxidase subunit II;locus_tag=GCA000153685_01702;product=cytochrome d ubiquinol oxidase subunit II;Dbxref=GO:0016682;gene=cydB;Parent=GCA000153685_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00426,RefSeq:WP_003408024.1,SO:0001217,UniParc:UPI00000D11C0,UniRef:UniRef100_A5U2X8,UniRef:UniRef50_A0A3S4T106,UniRef:UniRef90_A0A655I5Z8;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1817464	1818921	.	-	.	ID=GCA000153685_01703_gene;locus_tag=GCA000153685_01703
contig_1	Pyrodigal	CDS	1817464	1818921	.	-	0	ID=GCA000153685_01703;Name=Cytochrome D ubiquinol oxidase subunit I;locus_tag=GCA000153685_01703;product=Cytochrome D ubiquinol oxidase subunit I;Parent=GCA000153685_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00425,RefSeq:WP_003408027.1,SO:0001217,UniParc:UPI00000D1110,UniRef:UniRef100_A5U2X9,UniRef:UniRef50_A0A161YI43,UniRef:UniRef90_A0A654T9L4;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1819032	1819601	.	-	.	ID=GCA000153685_01704_gene;locus_tag=GCA000153685_01704;gene=hdeD
contig_1	Pyrodigal	CDS	1819032	1819601	.	-	0	ID=GCA000153685_01704;Name=HdeD family acid-resistance protein;locus_tag=GCA000153685_01704;product=HdeD family acid-resistance protein;gene=hdeD;Parent=GCA000153685_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E33290,UniRef:UniRef100_A5U2Y0,UniRef:UniRef50_A0A172UM24,UniRef:UniRef90_A0A0H3L9E4
contig_1	Pyrodigal	gene	1819648	1820904	.	-	.	ID=GCA000153685_01705_gene;locus_tag=GCA000153685_01705;gene=cya
contig_1	Pyrodigal	CDS	1819648	1820904	.	-	0	ID=GCA000153685_01705;Name=adenylate cyclase;locus_tag=GCA000153685_01705;product=adenylate cyclase;Dbxref=GO:0000287,GO:0001653,GO:0004016,GO:0004383,GO:0005524,GO:0005886,GO:0006171,GO:0006182,GO:0007168,GO:0030145,GO:0035556;gene=cya;Parent=GCA000153685_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408035,SO:0001217,UniParc:UPI000016529D,UniRef:UniRef100_A0A679LEM3,UniRef:UniRef50_P9WQ35,UniRef:UniRef90_P9WQ35;ec_number=4.6.1.1
contig_1	tRNAscan-SE	gene	1821046	1821122	.	-	.	ID=GCA000153685_01706_gene;locus_tag=GCA000153685_01706;gene=trnL
contig_1	tRNAscan-SE	tRNA	1821046	1821122	.	-	.	ID=GCA000153685_01706;Name=tRNA-Leu(caa);locus_tag=GCA000153685_01706;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000153685_01706_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	1821205	1821831	.	+	.	ID=GCA000153685_01707_gene;locus_tag=GCA000153685_01707;gene=amiR
contig_1	Pyrodigal	CDS	1821205	1821831	.	+	0	ID=GCA000153685_01707;Name=Response regulator;locus_tag=GCA000153685_01707;product=Response regulator;gene=amiR;Parent=GCA000153685_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3707,COG:TK,SO:0001217,UniParc:UPI00000D4F2E,UniRef:UniRef100_A0A0E8WIM2,UniRef:UniRef50_P9WGM3,UniRef:UniRef90_Q740N1
contig_1	Pyrodigal	gene	1821899	1823107	.	-	.	ID=GCA000153685_01708_gene;locus_tag=GCA000153685_01708
contig_1	Pyrodigal	CDS	1821899	1823107	.	-	0	ID=GCA000153685_01708;Name=lipid-transfer protein;locus_tag=GCA000153685_01708;product=lipid-transfer protein;Dbxref=GO:0016747;Parent=GCA000153685_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408054.1,SO:0001217,UniParc:UPI00000D5EB6,UniRef:UniRef100_A5U2Y3,UniRef:UniRef50_C7Q4Q9,UniRef:UniRef90_R4LXR5
contig_1	Pyrodigal	gene	1823104	1823595	.	-	.	ID=GCA000153685_01709_gene;locus_tag=GCA000153685_01709
contig_1	Pyrodigal	CDS	1823104	1823595	.	-	0	ID=GCA000153685_01709;Name=Benzoylsuccinyl-CoA thiolase;locus_tag=GCA000153685_01709;product=Benzoylsuccinyl-CoA thiolase;Parent=GCA000153685_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408058.1,SO:0001217,UniParc:UPI00000D0F59,UniRef:UniRef100_O06145,UniRef:UniRef50_A1TAG2,UniRef:UniRef90_A0A0H3M4E8
contig_1	Pyrodigal	gene	1823750	1826413	.	+	.	ID=GCA000153685_01710_gene;locus_tag=GCA000153685_01710;gene=polA
contig_1	Pyrodigal	CDS	1823750	1826413	.	+	0	ID=GCA000153685_01710;Name=DNA polymerase I;locus_tag=GCA000153685_01710;product=DNA polymerase I;Dbxref=GO:0003887,GO:0006260;gene=polA;Parent=GCA000153685_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P9WNU5,UniRef:UniRef90_UPI0018AC2910;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1826576	1828021	.	+	.	ID=GCA000153685_01711_gene;locus_tag=GCA000153685_01711;gene=rpsA
contig_1	Pyrodigal	CDS	1826576	1828021	.	+	0	ID=GCA000153685_01711;Name=30S ribosomal protein S1;locus_tag=GCA000153685_01711;product=30S ribosomal protein S1;Dbxref=GO:0003676,GO:0003729,GO:0003735,GO:0005829,GO:0005886,GO:0006412,GO:0009274,GO:0022627;gene=rpsA;Parent=GCA000153685_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_003408066.1,SO:0001217,UniParc:UPI0000134E2A,UniRef:UniRef100_P9WH43,UniRef:UniRef50_P9WH43,UniRef:UniRef90_P9WH43
contig_1	Pyrodigal	gene	1828047	1829270	.	+	.	ID=GCA000153685_01712_gene;locus_tag=GCA000153685_01712;gene=coaE
contig_1	Pyrodigal	CDS	1828047	1829270	.	+	0	ID=GCA000153685_01712;Name=dephospho-CoA kinase;locus_tag=GCA000153685_01712;product=dephospho-CoA kinase;Dbxref=GO:0002135,GO:0004140,GO:0005524,GO:0005829,GO:0015937,GO:0032564;gene=coaE;Parent=GCA000153685_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00859,RefSeq:WP_003408069.1,SO:0001217,UniParc:UPI0000127CE6,UniRef:UniRef100_P9WPA3,UniRef:UniRef50_P9WPA3,UniRef:UniRef90_P9WPA3;ec_number=2.7.1.24
contig_1	Pyrodigal	gene	1829421	1829864	.	-	.	ID=GCA000153685_01713_gene;locus_tag=GCA000153685_01713
contig_1	Pyrodigal	CDS	1829421	1829864	.	-	0	ID=GCA000153685_01713;Name=DUF402 domain-containing protein;locus_tag=GCA000153685_01713;product=DUF402 domain-containing protein;Parent=GCA000153685_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09146,RefSeq:WP_003898953.1,SO:0001217,UniParc:UPI00000D0FB2,UniRef:UniRef100_O06149,UniRef:UniRef50_O06149,UniRef:UniRef90_O06149
contig_1	Pyrodigal	gene	1829929	1832205	.	+	.	ID=GCA000153685_01714_gene;locus_tag=GCA000153685_01714;gene=uvrB
contig_1	Pyrodigal	CDS	1829929	1832205	.	+	0	ID=GCA000153685_01714;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000153685_01714;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0004386,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrB;Parent=GCA000153685_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,SO:0001217,UniParc:UPI0001C59433,UniRef:UniRef100_A0A0E8UJG2,UniRef:UniRef50_P9WFC7,UniRef:UniRef90_A0PP48
contig_1	Pyrodigal	gene	1832202	1833617	.	+	.	ID=GCA000153685_01715_gene;locus_tag=GCA000153685_01715
contig_1	Pyrodigal	CDS	1832202	1833617	.	+	0	ID=GCA000153685_01715;Name=putative multidrug-efflux transporter Rv1634;locus_tag=GCA000153685_01715;product=putative multidrug-efflux transporter Rv1634;Dbxref=GO:0005886,GO:0015562,GO:0022857,GO:0046677,GO:0055085,GO:1990961;Parent=GCA000153685_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898954.1,SO:0001217,UniParc:UPI00000D5FE1,UniRef:UniRef100_P9WJX3,UniRef:UniRef50_P9WJX3,UniRef:UniRef90_P9WJX3
contig_1	Pyrodigal	gene	1833606	1835174	.	-	.	ID=GCA000153685_01716_gene;locus_tag=GCA000153685_01716;gene=capA
contig_1	Pyrodigal	CDS	1833606	1835174	.	-	0	ID=GCA000153685_01716;Name=mannosyltransferase;locus_tag=GCA000153685_01716;product=mannosyltransferase;gene=capA;Parent=GCA000153685_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14340,SO:0001217,UniParc:UPI000252D2DC,UniRef:UniRef100_Q7D885,UniRef:UniRef50_Q7D885,UniRef:UniRef90_Q7D885,VFDB:VFC0258,VFDB:VFG052202;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	1835202	1835462	.	+	.	ID=GCA000153685_01717_gene;locus_tag=GCA000153685_01717
contig_1	Pyrodigal	CDS	1835202	1835462	.	+	0	ID=GCA000153685_01717;Name=hypothetical protein;locus_tag=GCA000153685_01717;product=hypothetical protein;Parent=GCA000153685_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003905612.1,SO:0001217,UniParc:UPI0001C54FA1,UniRef:UniRef100_R4M5Z2,UniRef:UniRef50_R4M5Z2,UniRef:UniRef90_R4M5Z2
contig_1	Pyrodigal	gene	1835485	1835925	.	+	.	ID=GCA000153685_01718_gene;locus_tag=GCA000153685_01718;gene=uspA
contig_1	Pyrodigal	CDS	1835485	1835925	.	+	0	ID=GCA000153685_01718;Name=Universal stress protein Rv1636;locus_tag=GCA000153685_01718;product=Universal stress protein Rv1636;Dbxref=GO:0005886,GO:0009274,GO:0046677;gene=uspA;Parent=GCA000153685_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_003408085.1,SO:0001217,UniParc:UPI000003325F,UniRef:UniRef100_P9WFC9,UniRef:UniRef50_P9WFC9,UniRef:UniRef90_P9WFC9
contig_1	Pyrodigal	gene	1835932	1836783	.	-	.	ID=GCA000153685_01719_gene;locus_tag=GCA000153685_01719
contig_1	Pyrodigal	CDS	1835932	1836783	.	-	0	ID=GCA000153685_01719;Name=Conserved protein;locus_tag=GCA000153685_01719;product=Conserved protein;Parent=GCA000153685_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C4F58F,UniRef:UniRef100_A0A0H3LDB8,UniRef:UniRef50_A0A143Q9U5,UniRef:UniRef90_O06154
contig_1	Pyrodigal	gene	1836808	1839750	.	+	.	ID=GCA000153685_01720_gene;locus_tag=GCA000153685_01720;gene=uvrA
contig_1	Pyrodigal	CDS	1836808	1839750	.	+	0	ID=GCA000153685_01720;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000153685_01720;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005829,GO:0005886,GO:0006289,GO:0006974,GO:0008270,GO:0009274,GO:0009380,GO:0009381,GO:0009432,GO:0016887,GO:0060543;gene=uvrA;Parent=GCA000153685_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03701,SO:0001217,UniParc:UPI0000165060,UniRef:UniRef100_A0A0E8WKT7,UniRef:UniRef50_P9WQK7,UniRef:UniRef90_P9WQK7;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	1839807	1840064	.	-	.	ID=GCA000153685_01721_gene;locus_tag=GCA000153685_01721
contig_1	Pyrodigal	CDS	1839807	1840064	.	-	0	ID=GCA000153685_01721;Name=Phage shock protein A (IM30);locus_tag=GCA000153685_01721;product=Phage shock protein A (IM30);Parent=GCA000153685_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408096.1,SO:0001217,UniParc:UPI00000D2C3C,UniRef:UniRef100_L7N673,UniRef:UniRef50_L7N673,UniRef:UniRef90_L7N673
contig_1	Pyrodigal	gene	1840080	1841549	.	-	.	ID=GCA000153685_01722_gene;locus_tag=GCA000153685_01722
contig_1	Pyrodigal	CDS	1840080	1841549	.	-	0	ID=GCA000153685_01722;Name=Esterase family protein;locus_tag=GCA000153685_01722;product=Esterase family protein;Parent=GCA000153685_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408099.1,SO:0001217,UniParc:UPI00000D106C,UniRef:UniRef100_A5U2Z6,UniRef:UniRef50_A0A378T679,UniRef:UniRef90_A5U2Z6
contig_1	Pyrodigal	gene	1841608	1844943	.	-	.	ID=GCA000153685_01723_gene;locus_tag=GCA000153685_01723;gene=lysX
contig_1	Pyrodigal	CDS	1841608	1844943	.	-	0	ID=GCA000153685_01723;Name=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;locus_tag=GCA000153685_01723;product=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0003676,GO:0003677,GO:0004824,GO:0005524,GO:0005829,GO:0005886,GO:0006430,GO:0006629,GO:0046677,GO:0050071;gene=lysX;Parent=GCA000153685_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04567,RefSeq:WP_003918287.1,SO:0001217,UniParc:UPI000169A3FA,UniRef:UniRef100_A0A0E8LUA5,UniRef:UniRef50_P9WFU7,UniRef:UniRef90_P9WFU7;ec_number=6.1.1.6
contig_1	Pyrodigal	gene	1845448	1845969	.	+	.	ID=GCA000153685_01724_gene;locus_tag=GCA000153685_01724;gene=infC
contig_1	Pyrodigal	CDS	1845448	1845969	.	+	0	ID=GCA000153685_01724;Name=translation initiation factor IF-3;locus_tag=GCA000153685_01724;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0005829,GO:0005886,GO:0006413,GO:0032790,GO:0043022;gene=infC;Parent=GCA000153685_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE593,UniRef:UniRef100_A0A0H3LDC1,UniRef:UniRef50_P9WKJ9,UniRef:UniRef90_P9WKJ9
contig_1	Pyrodigal	gene	1846019	1846213	.	+	.	ID=GCA000153685_01725_gene;locus_tag=GCA000153685_01725;gene=rpmI
contig_1	Pyrodigal	CDS	1846019	1846213	.	+	0	ID=GCA000153685_01725;Name=50S ribosomal protein L35;locus_tag=GCA000153685_01725;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA000153685_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02916,RefSeq:WP_003408106.1,SO:0001217,UniParc:UPI0000133FFB,UniRef:UniRef100_P9WH91,UniRef:UniRef50_Q8NQP7,UniRef:UniRef90_P9WH91
contig_1	Pyrodigal	gene	1846275	1846664	.	+	.	ID=GCA000153685_01726_gene;locus_tag=GCA000153685_01726;gene=rplT
contig_1	Pyrodigal	CDS	1846275	1846664	.	+	0	ID=GCA000153685_01726;Name=50S ribosomal protein L20;locus_tag=GCA000153685_01726;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA000153685_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_003408108.1,SO:0001217,UniParc:UPI0000133D1B,UniRef:UniRef100_P9WHC5,UniRef:UniRef50_C5BW32,UniRef:UniRef90_A0PP60
contig_1	Pyrodigal	gene	1846697	1847479	.	+	.	ID=GCA000153685_01727_gene;locus_tag=GCA000153685_01727
contig_1	Pyrodigal	CDS	1846697	1847479	.	+	0	ID=GCA000153685_01727;Name=23S rRNA methyltransferase;locus_tag=GCA000153685_01727;product=23S rRNA methyltransferase;Parent=GCA000153685_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408112.1,SO:0001217,UniParc:UPI0000165063,UniRef:UniRef100_A0A1R3XYX1,UniRef:UniRef50_A0A076NMS7,UniRef:UniRef90_A0A655JG41
contig_1	Pyrodigal	gene	1847490	1848545	.	-	.	ID=GCA000153685_01728_gene;locus_tag=GCA000153685_01728
contig_1	Pyrodigal	CDS	1847490	1848545	.	-	0	ID=GCA000153685_01728;Name=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;locus_tag=GCA000153685_01728;product=ER-bound oxygenase mpaB/mpaB'/Rubber oxygenase catalytic domain-containing protein;Parent=GCA000153685_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408141.1,SO:0001217,UniParc:UPI00000D0FFF,UniRef:UniRef100_P94979,UniRef:UniRef50_G8RQ65,UniRef:UniRef90_P94979
contig_1	Pyrodigal	gene	1848855	1849787	.	+	.	ID=GCA000153685_01729_gene;locus_tag=GCA000153685_01729
contig_1	Pyrodigal	CDS	1848855	1849787	.	+	0	ID=GCA000153685_01729;Name=PE family protein PE17;locus_tag=GCA000153685_01729;product=PE family protein PE17;Parent=GCA000153685_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900384.1,SO:0001217,UniParc:UPI000004B72F,UniRef:UniRef100_L7N681,UniRef:UniRef50_A0A1A2WRH3,UniRef:UniRef90_L7N681
contig_1	Pyrodigal	gene	1849865	1850815	.	+	.	ID=GCA000153685_01730_gene;locus_tag=GCA000153685_01730
contig_1	Pyrodigal	CDS	1849865	1850815	.	+	0	ID=GCA000153685_01730;Name=adenylate cyclase;locus_tag=GCA000153685_01730;product=adenylate cyclase;Parent=GCA000153685_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003913695,BlastRules:WP_010908317,SO:0001217,UniParc:UPI00001A901D,UniRef:UniRef100_A0A1R3XYY5,UniRef:UniRef50_P94982,UniRef:UniRef90_P94982;ec_number=4.6.1.1
contig_1	Pyrodigal	gene	1850822	1851628	.	+	.	ID=GCA000153685_01731_gene;locus_tag=GCA000153685_01731
contig_1	Pyrodigal	CDS	1850822	1851628	.	+	0	ID=GCA000153685_01731;Name=Transmembrane protein;locus_tag=GCA000153685_01731;product=Transmembrane protein;Parent=GCA000153685_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408145.1,SO:0001217,UniParc:UPI00000D11EC,UniRef:UniRef100_A5U305,UniRef:UniRef50_A0A1A3NBW0,UniRef:UniRef90_A0A8I0EM22
contig_1	Pyrodigal	gene	1851791	1852849	.	+	.	ID=GCA000153685_01732_gene;locus_tag=GCA000153685_01732;gene=pheS
contig_1	Pyrodigal	CDS	1851791	1852849	.	+	0	ID=GCA000153685_01732;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000153685_01732;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0005886,GO:0006432;gene=pheS;Parent=GCA000153685_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01889,RefSeq:WP_003898958.1,SO:0001217,UniParc:UPI00005EE595,UniRef:UniRef100_P9WFU3,UniRef:UniRef50_P9WFU3,UniRef:UniRef90_P9WFU3;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1852849	1855344	.	+	.	ID=GCA000153685_01733_gene;locus_tag=GCA000153685_01733;gene=pheT
contig_1	Pyrodigal	CDS	1852849	1855344	.	+	0	ID=GCA000153685_01733;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000153685_01733;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0006432,GO:0009328;gene=pheT;Parent=GCA000153685_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01890,RefSeq:WP_003900385.1,SO:0001217,UniParc:UPI00012781D8,UniRef:UniRef100_A0A0H3L9I2,UniRef:UniRef50_P9WFU1,UniRef:UniRef90_P9WFU1;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1855438	1858473	.	-	.	ID=GCA000153685_01734_gene;locus_tag=GCA000153685_01734;gene=pE_PGRS30
contig_1	Pyrodigal	CDS	1855438	1858473	.	-	0	ID=GCA000153685_01734;Name=PE-PGRS family protein PE_PGRS30;locus_tag=GCA000153685_01734;product=PE-PGRS family protein PE_PGRS30;Dbxref=GO:0005576,GO:0009986;gene=pE_PGRS30;Parent=GCA000153685_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345083.1,SO:0001217,UniParc:UPI000252D2DF,UniRef:UniRef100_A0A0H3LDC7,UniRef:UniRef50_Q79FL8,UniRef:UniRef90_Q79FL8,VFDB:VFC0258,VFDB:VFG031564
contig_1	Pyrodigal	gene	1858667	1859725	.	+	.	ID=GCA000153685_01735_gene;locus_tag=GCA000153685_01735;gene=argC
contig_1	Pyrodigal	CDS	1858667	1859725	.	+	0	ID=GCA000153685_01735;Name=N-acetyl-gamma-glutamyl-phosphate reductase;locus_tag=GCA000153685_01735;product=N-acetyl-gamma-glutamyl-phosphate reductase;Dbxref=GO:0003942,GO:0005737,GO:0006526,GO:0006592,GO:0051287,GO:0070401;gene=argC;Parent=GCA000153685_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345084.1,SO:0001217,UniParc:UPI0002A82E0B,UniRef:UniRef100_A0A0E9ACS4,UniRef:UniRef50_P9WPZ9,UniRef:UniRef90_P9WPZ9;ec_number=1.2.1.38
contig_1	Pyrodigal	gene	1859722	1860936	.	+	.	ID=GCA000153685_01736_gene;locus_tag=GCA000153685_01736;gene=argJ
contig_1	Pyrodigal	CDS	1859722	1860936	.	+	0	ID=GCA000153685_01736;Name=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;locus_tag=GCA000153685_01736;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;Dbxref=GO:0004042,GO:0004358,GO:0005737,GO:0006526,GO:0006592;gene=argJ;Parent=GCA000153685_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00620,RefSeq:WP_003408160.1,SO:0001217,UniParc:UPI00000D1075,UniRef:UniRef100_P9WPZ3,UniRef:UniRef50_P9WPZ3,UniRef:UniRef90_P9WPZ3;ec_number=2.3.1.35
contig_1	Pyrodigal	gene	1860933	1861817	.	+	.	ID=GCA000153685_01737_gene;locus_tag=GCA000153685_01737;gene=argB
contig_1	Pyrodigal	CDS	1860933	1861817	.	+	0	ID=GCA000153685_01737;Name=Acetylglutamate kinase;locus_tag=GCA000153685_01737;product=Acetylglutamate kinase;Dbxref=GO:0003991,GO:0005524,GO:0005737,GO:0005886,GO:0006526,GO:0009274,GO:0042450;gene=argB;Parent=GCA000153685_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408161.1,SO:0001217,UniParc:UPI0000125E24,UniRef:UniRef100_P9WQ01,UniRef:UniRef50_P9WQ01,UniRef:UniRef90_P9WQ01;ec_number=2.7.2.8
contig_1	Pyrodigal	gene	1861814	1863016	.	+	.	ID=GCA000153685_01738_gene;locus_tag=GCA000153685_01738;gene=argD
contig_1	Pyrodigal	CDS	1861814	1863016	.	+	0	ID=GCA000153685_01738;Name=acetylornithine transaminase;locus_tag=GCA000153685_01738;product=acetylornithine transaminase;Dbxref=GO:0003992,GO:0005737,GO:0006525,GO:0006526,GO:0008483,GO:0030170,GO:0042802;gene=argD;Parent=GCA000153685_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408163.1,SO:0001217,UniParc:UPI0000125E94,UniRef:UniRef100_P9WPZ7,UniRef:UniRef50_P9WPZ7,UniRef:UniRef90_P9WPZ7;ec_number=2.6.1.11
contig_1	Pyrodigal	gene	1863013	1863936	.	+	.	ID=GCA000153685_01739_gene;locus_tag=GCA000153685_01739;gene=argF
contig_1	Pyrodigal	CDS	1863013	1863936	.	+	0	ID=GCA000153685_01739;Name=ornithine carbamoyltransferase;locus_tag=GCA000153685_01739;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000153685_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00611,RefSeq:WP_003408165.1,SO:0001217,UniParc:UPI0000130EFA,UniRef:UniRef100_P9WIT9,UniRef:UniRef50_P9WIT9,UniRef:UniRef90_P9WIT9;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	1863933	1864445	.	+	.	ID=GCA000153685_01740_gene;locus_tag=GCA000153685_01740;gene=argR
contig_1	Pyrodigal	CDS	1863933	1864445	.	+	0	ID=GCA000153685_01740;Name=arginine repressor;locus_tag=GCA000153685_01740;product=arginine repressor;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006525,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=argR;Parent=GCA000153685_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03402,RefSeq:WP_003408178.1,SO:0001217,UniParc:UPI0000125ECD,UniRef:UniRef100_P9WPY9,UniRef:UniRef50_P9WPY9,UniRef:UniRef90_P9WPY9
contig_1	Pyrodigal	gene	1864454	1865650	.	+	.	ID=GCA000153685_01741_gene;locus_tag=GCA000153685_01741;gene=argG
contig_1	Pyrodigal	CDS	1864454	1865650	.	+	0	ID=GCA000153685_01741;Name=argininosuccinate synthase;locus_tag=GCA000153685_01741;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526;gene=argG;Parent=GCA000153685_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,RefSeq:WP_003408179.1,SO:0001217,UniParc:UPI000012618B,UniRef:UniRef100_P9WPW7,UniRef:UniRef50_P9WPW7,UniRef:UniRef90_P9WPW7;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	1865731	1867143	.	+	.	ID=GCA000153685_01742_gene;locus_tag=GCA000153685_01742;gene=argH
contig_1	Pyrodigal	CDS	1865731	1867143	.	+	0	ID=GCA000153685_01742;Name=argininosuccinate lyase;locus_tag=GCA000153685_01742;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0009274,GO:0042450;gene=argH;Parent=GCA000153685_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01755,RefSeq:WP_003408180.1,SO:0001217,UniParc:UPI0000125EFF,UniRef:UniRef100_P9WPY7,UniRef:UniRef50_P9WPY7,UniRef:UniRef90_P9WPY7;ec_number=4.3.2.1
contig_1	Pyrodigal	gene	1867252	1868313	.	+	.	ID=GCA000153685_01743_gene;locus_tag=GCA000153685_01743;gene=pks10
contig_1	Pyrodigal	CDS	1867252	1868313	.	+	0	ID=GCA000153685_01743;Name=Polyketide synthase-like Pks10;locus_tag=GCA000153685_01743;product=Polyketide synthase-like Pks10;Dbxref=GO:0005886,GO:0006633,GO:0008610,GO:0016747,GO:0030639,GO:0034081,GO:0071770;gene=pks10;Parent=GCA000153685_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408181.1,SO:0001217,UniParc:UPI00000D1006,UniRef:UniRef100_P9WPF5,UniRef:UniRef50_P9WPF5,UniRef:UniRef90_P9WPF5;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1868396	1874776	.	+	.	ID=GCA000153685_01744_gene;locus_tag=GCA000153685_01744
contig_1	Pyrodigal	CDS	1868396	1874776	.	+	0	ID=GCA000153685_01744;Name=Polyketide synthase Pks7;locus_tag=GCA000153685_01744;product=Polyketide synthase Pks7;Parent=GCA000153685_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900387.1,SO:0001217,UniParc:UPI00000D6039,UniRef:UniRef100_A5U318,UniRef:UniRef50_A0AAC9VVU5,UniRef:UniRef90_A5U318
contig_1	Infernal	gene	1869449	1869520	.	-	.	ID=GCA000153685_01745_gene;locus_tag=GCA000153685_01745;gene=ASpks
contig_1	Infernal	ncRNA	1869449	1869520	2.1e-10	-	.	ID=GCA000153685_01745;Name=ASpks TB sRNA;locus_tag=GCA000153685_01745;product=ASpks TB sRNA;Dbxref=RFAM:RF01782;Parent=GCA000153685_01745_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01782
contig_1	Pyrodigal	gene	1874796	1879604	.	+	.	ID=GCA000153685_01746_gene;locus_tag=GCA000153685_01746
contig_1	Pyrodigal	CDS	1874796	1879604	.	+	0	ID=GCA000153685_01746;Name=Phenolphthiocerol synthesis polyketide synthase type I Pks15/1;locus_tag=GCA000153685_01746;product=Phenolphthiocerol synthesis polyketide synthase type I Pks15/1;Parent=GCA000153685_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900388.1,SO:0001217,UniParc:UPI0000165068,UniRef:UniRef100_A0A0H3LG49,UniRef:UniRef50_A0AA44LMQ3,UniRef:UniRef90_A0AA44LMQ3
contig_1	Infernal	gene	1875840	1875908	.	-	.	ID=GCA000153685_01747_gene;locus_tag=GCA000153685_01747;gene=ASpks
contig_1	Infernal	ncRNA	1875840	1875908	1.5e-08	-	.	ID=GCA000153685_01747;Name=ASpks TB sRNA;locus_tag=GCA000153685_01747;product=ASpks TB sRNA;Dbxref=RFAM:RF01782;Parent=GCA000153685_01747_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01782
contig_1	Pyrodigal	gene	1879580	1881112	.	+	.	ID=GCA000153685_01748_gene;locus_tag=GCA000153685_01748
contig_1	Pyrodigal	CDS	1879580	1881112	.	+	0	ID=GCA000153685_01748;Name=Putative polyketide synthase Pks17;locus_tag=GCA000153685_01748;product=Putative polyketide synthase Pks17;Parent=GCA000153685_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901230.1,SO:0001217,UniParc:UPI000169A481,UniRef:UniRef100_A0A0H3L915,UniRef:UniRef50_A0A655ICG6,UniRef:UniRef90_A0A654ZXP5
contig_1	Pyrodigal	gene	1881118	1884171	.	+	.	ID=GCA000153685_01749_gene;locus_tag=GCA000153685_01749
contig_1	Pyrodigal	CDS	1881118	1884171	.	+	0	ID=GCA000153685_01749;Name=Polyketide synthase Pks9;locus_tag=GCA000153685_01749;product=Polyketide synthase Pks9;Parent=GCA000153685_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900389.1,SO:0001217,UniParc:UPI00000D5FB6,UniRef:UniRef100_A5U321,UniRef:UniRef50_X8CGD7,UniRef:UniRef90_A5U321
contig_1	Pyrodigal	gene	1884318	1885379	.	+	.	ID=GCA000153685_01750_gene;locus_tag=GCA000153685_01750;gene=pks11
contig_1	Pyrodigal	CDS	1884318	1885379	.	+	0	ID=GCA000153685_01750;Name=Methyl-branched alkylpyrone synthesis polyketide synthase-like Pks11;locus_tag=GCA000153685_01750;product=Methyl-branched alkylpyrone synthesis polyketide synthase-like Pks11;Dbxref=GO:0006633,GO:0008610,GO:0009715,GO:0016747,GO:0030639,GO:0034081,GO:0071770;gene=pks11;Parent=GCA000153685_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408248.1,SO:0001217,UniParc:UPI00000D5E53,UniRef:UniRef100_P9WPF3,UniRef:UniRef50_P9WPF3,UniRef:UniRef90_P9WPF3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1885362	1886672	.	-	.	ID=GCA000153685_01751_gene;locus_tag=GCA000153685_01751;gene=cyp139
contig_1	Pyrodigal	CDS	1885362	1886672	.	-	0	ID=GCA000153685_01751;Name=Putative cytochrome P450 139;locus_tag=GCA000153685_01751;product=Putative cytochrome P450 139;Dbxref=GO:0004497,GO:0005506,GO:0009274,GO:0016491,GO:0016705,GO:0020037;gene=cyp139;Parent=GCA000153685_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165069,UniRef:UniRef100_A0A0H3LA85,UniRef:UniRef50_P9WPM1,UniRef:UniRef90_P9WPM1;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	1886669	1888444	.	-	.	ID=GCA000153685_01752_gene;locus_tag=GCA000153685_01752
contig_1	Pyrodigal	CDS	1886669	1888444	.	-	0	ID=GCA000153685_01752;Name=ABC transporter domain-containing protein;locus_tag=GCA000153685_01752;product=ABC transporter domain-containing protein;Parent=GCA000153685_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408257.1,SO:0001217,UniParc:UPI00000D2C3E,UniRef:UniRef100_Q8VJZ4,UniRef:UniRef50_S2ZMM2,UniRef:UniRef90_A0A0H3LG54
contig_1	Pyrodigal	gene	1889108	1889455	.	+	.	ID=GCA000153685_01753_gene;locus_tag=GCA000153685_01753
contig_1	Pyrodigal	CDS	1889108	1889455	.	+	0	ID=GCA000153685_01753;Name=DUF427 domain-containing protein;locus_tag=GCA000153685_01753;product=DUF427 domain-containing protein;Parent=GCA000153685_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408261.1,SO:0001217,UniParc:UPI00000CCBA5,UniRef:UniRef100_O53917,UniRef:UniRef50_A0A7I7WQD5,UniRef:UniRef90_O53917
contig_1	Pyrodigal	gene	1889415	1889855	.	+	.	ID=GCA000153685_01754_gene;locus_tag=GCA000153685_01754;gene=merT
contig_1	Pyrodigal	CDS	1889415	1889855	.	+	0	ID=GCA000153685_01754;Name=Mercuric transport protein MerT;locus_tag=GCA000153685_01754;product=Mercuric transport protein MerT;gene=merT;Parent=GCA000153685_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003254AEB,UniRef:UniRef100_Q7D868,UniRef:UniRef50_A0A1V1W5Q9,UniRef:UniRef90_A0A0H3L9K9
contig_1	Pyrodigal	gene	1889864	1891195	.	-	.	ID=GCA000153685_01755_gene;locus_tag=GCA000153685_01755
contig_1	Pyrodigal	CDS	1889864	1891195	.	-	0	ID=GCA000153685_01755;Name=Tartrate transporter;locus_tag=GCA000153685_01755;product=Tartrate transporter;Parent=GCA000153685_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408264.1,SO:0001217,UniParc:UPI00000D5F4F,UniRef:UniRef100_A5U329,UniRef:UniRef50_A0A7Z7N861,UniRef:UniRef90_A0A7Z7N861
contig_1	Pyrodigal	gene	1891288	1892220	.	-	.	ID=GCA000153685_01756_gene;locus_tag=GCA000153685_01756
contig_1	Pyrodigal	CDS	1891288	1892220	.	-	0	ID=GCA000153685_01756;Name=Transglutaminase-like domain-containing protein;locus_tag=GCA000153685_01756;product=Transglutaminase-like domain-containing protein;Parent=GCA000153685_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408265.1,SO:0001217,UniParc:UPI00000D0FCD,UniRef:UniRef100_O53920,UniRef:UniRef50_A0A7Z7N814,UniRef:UniRef90_O53920
contig_1	Pyrodigal	gene	1892248	1892904	.	-	.	ID=GCA000153685_01757_gene;locus_tag=GCA000153685_01757;gene=arsR
contig_1	Pyrodigal	CDS	1892248	1892904	.	-	0	ID=GCA000153685_01757;Name=ArsR family transcriptional regulator;locus_tag=GCA000153685_01757;product=ArsR family transcriptional regulator;gene=arsR;Parent=GCA000153685_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408266.1,SO:0001217,UniParc:UPI00000D602E,UniRef:UniRef100_A5U331,UniRef:UniRef50_A0A3N0GI06,UniRef:UniRef90_A5U331
contig_1	Pyrodigal	gene	1893089	1893235	.	+	.	ID=GCA000153685_01758_gene;locus_tag=GCA000153685_01758
contig_1	Pyrodigal	CDS	1893089	1893235	.	+	0	ID=GCA000153685_01758;Name=hypothetical protein;locus_tag=GCA000153685_01758;product=hypothetical protein;Parent=GCA000153685_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408267.1,SO:0001217,UniParc:UPI0001900FD9,UniRef:UniRef100_Q8VJZ3,UniRef:UniRef50_Q8VJZ3,UniRef:UniRef90_Q8VJZ3
contig_1	Pyrodigal	gene	1893229	1893963	.	-	.	ID=GCA000153685_01759_gene;locus_tag=GCA000153685_01759;gene=cmr
contig_1	Pyrodigal	CDS	1893229	1893963	.	-	0	ID=GCA000153685_01759;Name=HTH-type transcriptional regulator Cmr;locus_tag=GCA000153685_01759;product=HTH-type transcriptional regulator Cmr;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355;gene=cmr;Parent=GCA000153685_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898967,KEGG:K21884,RefSeq:WP_003898967.1,SO:0001217,UniParc:UPI00000D5FEF,UniRef:UniRef100_P9WMH5,UniRef:UniRef50_P9WMH5,UniRef:UniRef90_P9WMH5
contig_1	Pyrodigal	gene	1894194	1894739	.	+	.	ID=GCA000153685_01760_gene;locus_tag=GCA000153685_01760
contig_1	Pyrodigal	CDS	1894194	1894739	.	+	0	ID=GCA000153685_01760;Name=AhpC/TSA family;locus_tag=GCA000153685_01760;product=AhpC/TSA family;Parent=GCA000153685_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002D40432,UniRef:UniRef100_A0A0E8VRM8,UniRef:UniRef50_A0A7W9M4T4,UniRef:UniRef90_A0A655A467
contig_1	Pyrodigal	gene	1894736	1895284	.	+	.	ID=GCA000153685_01761_gene;locus_tag=GCA000153685_01761;gene=dsbF
contig_1	Pyrodigal	CDS	1894736	1895284	.	+	0	ID=GCA000153685_01761;Name=Lipoprotein DsbF;locus_tag=GCA000153685_01761;product=Lipoprotein DsbF;gene=dsbF;Parent=GCA000153685_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408271.1,SO:0001217,UniParc:UPI00000D5E5C,UniRef:UniRef100_A5U335,UniRef:UniRef50_A0A1X1YK18,UniRef:UniRef90_A5U335
contig_1	Pyrodigal	gene	1895379	1896287	.	+	.	ID=GCA000153685_01762_gene;locus_tag=GCA000153685_01762
contig_1	Pyrodigal	CDS	1895379	1896287	.	+	0	ID=GCA000153685_01762;Name=Integral membrane protein;locus_tag=GCA000153685_01762;product=Integral membrane protein;Parent=GCA000153685_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FDA,UniRef:UniRef100_A0A0H3LG58,UniRef:UniRef50_A0A7W1R2M5,UniRef:UniRef90_A0A8I0EMQ7
contig_1	Pyrodigal	gene	1896287	1897408	.	+	.	ID=GCA000153685_01763_gene;locus_tag=GCA000153685_01763
contig_1	Pyrodigal	CDS	1896287	1897408	.	+	0	ID=GCA000153685_01763;Name=putative acyl-CoA dehydrogenase FadE16;locus_tag=GCA000153685_01763;product=putative acyl-CoA dehydrogenase FadE16;Parent=GCA000153685_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408274.1,SO:0001217,UniParc:UPI00000D1159,UniRef:UniRef100_O53926,UniRef:UniRef50_O53926,UniRef:UniRef90_O53926
contig_1	Pyrodigal	gene	1897417	1898241	.	+	.	ID=GCA000153685_01764_gene;locus_tag=GCA000153685_01764
contig_1	Pyrodigal	CDS	1897417	1898241	.	+	0	ID=GCA000153685_01764;Name=Phosphate ABC transporter substrate-binding protein;locus_tag=GCA000153685_01764;product=Phosphate ABC transporter substrate-binding protein;Parent=GCA000153685_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898971.1,SO:0001217,UniParc:UPI00000D1118,UniRef:UniRef100_O33182,UniRef:UniRef50_O33182,UniRef:UniRef90_O33182
contig_1	Pyrodigal	gene	1898235	1899230	.	+	.	ID=GCA000153685_01765_gene;locus_tag=GCA000153685_01765;gene=moeX
contig_1	Pyrodigal	CDS	1898235	1899230	.	+	0	ID=GCA000153685_01765;Name=putative molybdopterin biosynthesis protein MoeX;locus_tag=GCA000153685_01765;product=putative molybdopterin biosynthesis protein MoeX;gene=moeX;Parent=GCA000153685_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F5A,UniRef:UniRef100_A0A0H3LDG5,UniRef:UniRef50_K6V088,UniRef:UniRef90_O33183
contig_1	Pyrodigal	gene	1899460	1900308	.	+	.	ID=GCA000153685_01766_gene;locus_tag=GCA000153685_01766
contig_1	Pyrodigal	CDS	1899460	1900308	.	+	0	ID=GCA000153685_01766;Name=Coiled-coil structural protein;locus_tag=GCA000153685_01766;product=Coiled-coil structural protein;Parent=GCA000153685_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898973.1,SO:0001217,UniParc:UPI000016506D,UniRef:UniRef100_A0A0H3LAA4,UniRef:UniRef50_A0A498QWQ9,UniRef:UniRef90_A5U340
contig_1	Pyrodigal	gene	1900585	1903581	.	+	.	ID=GCA000153685_01767_gene;locus_tag=GCA000153685_01767
contig_1	Pyrodigal	CDS	1900585	1903581	.	+	0	ID=GCA000153685_01767;Name=Acyl-CoA synthetase;locus_tag=GCA000153685_01767;product=Acyl-CoA synthetase;Parent=GCA000153685_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B49,UniRef:UniRef100_A0A0H3LG70,UniRef:UniRef50_A0A448ITE6,UniRef:UniRef90_A0A0H3LG70
contig_1	Pyrodigal	gene	1903574	1903798	.	+	.	ID=GCA000153685_01768_gene;locus_tag=GCA000153685_01768
contig_1	Pyrodigal	CDS	1903574	1903798	.	+	0	ID=GCA000153685_01768;Name=UPF0434 protein Rv1684;locus_tag=GCA000153685_01768;product=UPF0434 protein Rv1684;Parent=GCA000153685_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408362.1,SO:0001217,UniParc:UPI00000D1092,UniRef:UniRef100_O33186,UniRef:UniRef50_A0A172QTG3,UniRef:UniRef90_O33186
contig_1	Pyrodigal	gene	1903764	1904387	.	-	.	ID=GCA000153685_01769_gene;locus_tag=GCA000153685_01769
contig_1	Pyrodigal	CDS	1903764	1904387	.	-	0	ID=GCA000153685_01769;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000153685_01769;product=HTH tetR-type domain-containing protein;Parent=GCA000153685_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408366.1,SO:0001217,UniParc:UPI00000D5E70,UniRef:UniRef100_O33187,UniRef:UniRef50_O33187,UniRef:UniRef90_O33187
contig_1	Pyrodigal	gene	1904389	1905069	.	-	.	ID=GCA000153685_01770_gene;locus_tag=GCA000153685_01770
contig_1	Pyrodigal	CDS	1904389	1905069	.	-	0	ID=GCA000153685_01770;Name=Transport permease protein;locus_tag=GCA000153685_01770;product=Transport permease protein;Parent=GCA000153685_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898974.1,SO:0001217,UniParc:UPI00000D5E7C,UniRef:UniRef100_O33188,UniRef:UniRef50_O33188,UniRef:UniRef90_O33188
contig_1	Pyrodigal	gene	1905141	1905908	.	-	.	ID=GCA000153685_01771_gene;locus_tag=GCA000153685_01771
contig_1	Pyrodigal	CDS	1905141	1905908	.	-	0	ID=GCA000153685_01771;Name=Multidrug resistance ABC transporter ATP-binding protein;locus_tag=GCA000153685_01771;product=Multidrug resistance ABC transporter ATP-binding protein;Parent=GCA000153685_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898975.1,SO:0001217,UniParc:UPI00000D6017,UniRef:UniRef100_A5U345,UniRef:UniRef50_A0A838KAK1,UniRef:UniRef90_A5U345
contig_1	Pyrodigal	gene	1905967	1906578	.	+	.	ID=GCA000153685_01772_gene;locus_tag=GCA000153685_01772
contig_1	Pyrodigal	CDS	1905967	1906578	.	+	0	ID=GCA000153685_01772;Name=DNA-3-methyladenine glycosylase;locus_tag=GCA000153685_01772;product=DNA-3-methyladenine glycosylase;Dbxref=GO:0003677,GO:0003905,GO:0006284;Parent=GCA000153685_01772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408373.1,SO:0001217,UniParc:UPI0000124EF1,UniRef:UniRef100_P9WJP7,UniRef:UniRef50_O05678,UniRef:UniRef90_P9WJP7;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	1906599	1907864	.	+	.	ID=GCA000153685_01773_gene;locus_tag=GCA000153685_01773;gene=tyrS
contig_1	Pyrodigal	CDS	1906599	1907864	.	+	0	ID=GCA000153685_01773;Name=tyrosine--tRNA ligase;locus_tag=GCA000153685_01773;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0005886,GO:0006437,GO:0009274,GO:0043039;gene=tyrS;Parent=GCA000153685_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01866,SO:0001217,UniParc:UPI00005EE5A3,UniRef:UniRef100_P9WFT1,UniRef:UniRef50_P9WFT1,UniRef:UniRef90_P9WFT1;ec_number=6.1.1.1
contig_1	Infernal	gene	1907950	1908016	.	-	.	ID=GCA000153685_01774_gene;locus_tag=GCA000153685_01774;gene=g2
contig_1	Infernal	ncRNA	1907950	1908016	3.3e-17	-	.	ID=GCA000153685_01774;Name=G2;locus_tag=GCA000153685_01774;product=G2;Dbxref=RFAM:RF01798;Parent=GCA000153685_01774_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01798
contig_1	Pyrodigal	gene	1908515	1908898	.	+	.	ID=GCA000153685_01775_gene;locus_tag=GCA000153685_01775;gene=lprJ
contig_1	Pyrodigal	CDS	1908515	1908898	.	+	0	ID=GCA000153685_01775;Name=lipoprotein LprJ;locus_tag=GCA000153685_01775;product=lipoprotein LprJ;Dbxref=GO:0005886;gene=lprJ;Parent=GCA000153685_01775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408378,RefSeq:WP_003408378.1,SO:0001217,UniParc:UPI00000D1115,UniRef:UniRef100_O33192,UniRef:UniRef50_O33192,UniRef:UniRef90_O33192
contig_1	Pyrodigal	gene	1908937	1909689	.	+	.	ID=GCA000153685_01776_gene;locus_tag=GCA000153685_01776
contig_1	Pyrodigal	CDS	1908937	1909689	.	+	0	ID=GCA000153685_01776;Name=Tetratrico peptide repeat group 5 domain-containing protein;locus_tag=GCA000153685_01776;product=Tetratrico peptide repeat group 5 domain-containing protein;Parent=GCA000153685_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408379.1,SO:0001217,UniParc:UPI00000D0FB1,UniRef:UniRef100_O33193,UniRef:UniRef50_O33193,UniRef:UniRef90_O33193
contig_1	Pyrodigal	gene	1909686	1910747	.	+	.	ID=GCA000153685_01777_gene;locus_tag=GCA000153685_01777
contig_1	Pyrodigal	CDS	1909686	1910747	.	+	0	ID=GCA000153685_01777;Name=D-glycerol 3-phosphate phosphatase;locus_tag=GCA000153685_01777;product=D-glycerol 3-phosphate phosphatase;Dbxref=GO:0000121,GO:0000287,GO:0005737,GO:0006071,GO:0016791,GO:0030145,GO:0042803,GO:0046475,GO:0050897;Parent=GCA000153685_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408380.1,SO:0001217,UniParc:UPI00000D1011,UniRef:UniRef100_O33194,UniRef:UniRef50_O33194,UniRef:UniRef90_O33194
contig_1	Pyrodigal	gene	1910744	1910920	.	+	.	ID=GCA000153685_01778_gene;locus_tag=GCA000153685_01778
contig_1	Pyrodigal	CDS	1910744	1910920	.	+	0	ID=GCA000153685_01778;Name=hypothetical protein;locus_tag=GCA000153685_01778;product=hypothetical protein;Parent=GCA000153685_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408381.1,SO:0001217,UniParc:UPI00000D0FA0,UniRef:UniRef100_O33195,UniRef:UniRef50_O33195,UniRef:UniRef90_O33195
contig_1	Pyrodigal	gene	1910928	1911734	.	+	.	ID=GCA000153685_01779_gene;locus_tag=GCA000153685_01779;gene=tlyA
contig_1	Pyrodigal	CDS	1910928	1911734	.	+	0	ID=GCA000153685_01779;Name=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;locus_tag=GCA000153685_01779;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;Dbxref=GO:0003723,GO:0005576,GO:0005737,GO:0008649,GO:0016020,GO:0019836,GO:0020002,GO:0031167,GO:0090729;gene=tlyA;Parent=GCA000153685_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408382,KEGG:K06442,RefSeq:WP_003408382.1,SO:0001217,UniParc:UPI00000D5FA9,UniRef:UniRef100_P9WJ63,UniRef:UniRef50_P9WJ63,UniRef:UniRef90_P9WJ63;ec_number=2.1.1.227
contig_1	Pyrodigal	gene	1911734	1912657	.	+	.	ID=GCA000153685_01780_gene;locus_tag=GCA000153685_01780;gene=ppnK
contig_1	Pyrodigal	CDS	1911734	1912657	.	+	0	ID=GCA000153685_01780;Name=NAD kinase;locus_tag=GCA000153685_01780;product=NAD kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0006797,GO:0019674,GO:0046872,GO:0051287;gene=ppnK;Parent=GCA000153685_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00858,RefSeq:WP_003408383.1,SO:0001217,UniParc:UPI00001320BA,UniRef:UniRef100_P9WHV7,UniRef:UniRef50_P9WHV7,UniRef:UniRef90_P9WHV7;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	1912671	1914434	.	+	.	ID=GCA000153685_01781_gene;locus_tag=GCA000153685_01781;gene=recN
contig_1	Pyrodigal	CDS	1912671	1914434	.	+	0	ID=GCA000153685_01781;Name=DNA repair protein RecN;locus_tag=GCA000153685_01781;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006310,GO:0009274,GO:0009432,GO:0043590;gene=recN;Parent=GCA000153685_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408385.1,SO:0001217,UniParc:UPI0000133590,UniRef:UniRef100_P9WHI7,UniRef:UniRef50_P9WHI7,UniRef:UniRef90_P9WHI7
contig_1	Pyrodigal	gene	1914536	1915711	.	+	.	ID=GCA000153685_01782_gene;locus_tag=GCA000153685_01782;gene=steA
contig_1	Pyrodigal	CDS	1914536	1915711	.	+	0	ID=GCA000153685_01782;Name=putative cytokinetic ring protein SteA;locus_tag=GCA000153685_01782;product=putative cytokinetic ring protein SteA;gene=steA;Parent=GCA000153685_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4825,COG:R,SO:0001217,UniParc:UPI00005EE5A4,UniRef:UniRef100_O33198,UniRef:UniRef50_O33198,UniRef:UniRef90_O33198
contig_1	Pyrodigal	gene	1915733	1916677	.	+	.	ID=GCA000153685_01783_gene;locus_tag=GCA000153685_01783;gene=mctB
contig_1	Pyrodigal	CDS	1915733	1916677	.	+	0	ID=GCA000153685_01783;Name=copper transporter MctB;locus_tag=GCA000153685_01783;product=copper transporter MctB;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0046930,GO:0055070;gene=mctB;Parent=GCA000153685_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408390,RefSeq:WP_003408390.1,SO:0001217,UniParc:UPI000013B003,UniRef:UniRef100_P9WJ83,UniRef:UniRef50_P9WJ83,UniRef:UniRef90_P9WJ83
contig_1	Pyrodigal	gene	1916817	1918577	.	+	.	ID=GCA000153685_01784_gene;locus_tag=GCA000153685_01784;gene=pyrG
contig_1	Pyrodigal	CDS	1916817	1918577	.	+	0	ID=GCA000153685_01784;Name=CTP synthase;locus_tag=GCA000153685_01784;product=CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0006241,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000153685_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01937,RefSeq:WP_003408396.1,SO:0001217,UniParc:UPI0000132D70,UniRef:UniRef100_P9WHK7,UniRef:UniRef50_P9WHK7,UniRef:UniRef90_P9WHK7;ec_number=6.3.4.2
contig_1	Pyrodigal	gene	1918654	1919193	.	+	.	ID=GCA000153685_01785_gene;locus_tag=GCA000153685_01785
contig_1	Pyrodigal	CDS	1918654	1919193	.	+	0	ID=GCA000153685_01785;Name=ADP-ribose pyrophosphatase;locus_tag=GCA000153685_01785;product=ADP-ribose pyrophosphatase;Dbxref=GO:0005829,GO:0006260,GO:0006281,GO:0006753,GO:0019693,GO:0044715,GO:0044716,GO:0046872,GO:0047631;Parent=GCA000153685_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01554,SO:0001217,UniParc:UPI00005EE5A5,UniRef:UniRef100_I6X235,UniRef:UniRef50_I6X235,UniRef:UniRef90_I6X235;ec_number=3.6.1.13
contig_1	Pyrodigal	gene	1919190	1920125	.	+	.	ID=GCA000153685_01786_gene;locus_tag=GCA000153685_01786;gene=xerD
contig_1	Pyrodigal	CDS	1919190	1920125	.	+	0	ID=GCA000153685_01786;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000153685_01786;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000153685_01786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408401.1,SO:0001217,UniParc:UPI00000D5E91,UniRef:UniRef100_P9WF33,UniRef:UniRef50_P9WF33,UniRef:UniRef90_P9WF33
contig_1	Pyrodigal	gene	1920199	1921563	.	-	.	ID=GCA000153685_01787_gene;locus_tag=GCA000153685_01787
contig_1	Pyrodigal	CDS	1920199	1921563	.	-	0	ID=GCA000153685_01787;Name=putative protein Rv1792c/MT1741/Mb1728c;locus_tag=GCA000153685_01787;product=putative protein Rv1792c/MT1741/Mb1728c;Parent=GCA000153685_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898977.1,SO:0001217,UniParc:UPI000013B140,UniRef:UniRef100_P9WLT3,UniRef:UniRef50_P9WLT3,UniRef:UniRef90_P9WLT3
contig_1	Pyrodigal	gene	1921825	1921986	.	-	.	ID=GCA000153685_01788_gene;locus_tag=GCA000153685_01788
contig_1	Pyrodigal	CDS	1921825	1921986	.	-	0	ID=GCA000153685_01788;Name=hypothetical protein;locus_tag=GCA000153685_01788;product=hypothetical protein;Parent=GCA000153685_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009939761.1,SO:0001217,UniParc:UPI00005EE5A6,UniRef:UniRef100_A0A0H3L972,UniRef:UniRef50_A0A0H3L972,UniRef:UniRef90_A0A0H3L972
contig_1	Pyrodigal	gene	1922119	1922820	.	-	.	ID=GCA000153685_01789_gene;locus_tag=GCA000153685_01789
contig_1	Pyrodigal	CDS	1922119	1922820	.	-	0	ID=GCA000153685_01789;Name=putative O-methyltransferase Rv1703c;locus_tag=GCA000153685_01789;product=putative O-methyltransferase Rv1703c;Dbxref=GO:0008171,GO:0032259,GO:0046872;Parent=GCA000153685_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F5D,UniRef:UniRef100_L0TAD5,UniRef:UniRef50_L0TAD5,UniRef:UniRef90_L0TAD5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1922774	1924444	.	-	.	ID=GCA000153685_01790_gene;locus_tag=GCA000153685_01790;gene=cycA
contig_1	Pyrodigal	CDS	1922774	1924444	.	-	0	ID=GCA000153685_01790;Name=D-serine/alanine/glycine transporter protein CycA;locus_tag=GCA000153685_01790;product=D-serine/alanine/glycine transporter protein CycA;gene=cycA;Parent=GCA000153685_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900393.1,SO:0001217,UniParc:UPI0001277FBC,UniRef:UniRef100_A0A0H3LDL1,UniRef:UniRef50_Q6A5H4,UniRef:UniRef90_A5U362
contig_1	Pyrodigal	gene	1924485	1925642	.	-	.	ID=GCA000153685_01791_gene;locus_tag=GCA000153685_01791;gene=pPE22
contig_1	Pyrodigal	CDS	1924485	1925642	.	-	0	ID=GCA000153685_01791;Name=putative PPE family protein PPE22;locus_tag=GCA000153685_01791;product=putative PPE family protein PPE22;Dbxref=GO:0052572;gene=pPE22;Parent=GCA000153685_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898979.1,SO:0001217,UniParc:UPI00000C1593,UniRef:UniRef100_P9WI19,UniRef:UniRef50_Q79FK6,UniRef:UniRef90_P9WI19
contig_1	Pyrodigal	gene	1925682	1926866	.	-	.	ID=GCA000153685_01792_gene;locus_tag=GCA000153685_01792;gene=pPE23
contig_1	Pyrodigal	CDS	1925682	1926866	.	-	0	ID=GCA000153685_01792;Name=putative PPE family protein PPE23;locus_tag=GCA000153685_01792;product=putative PPE family protein PPE23;Dbxref=GO:0052572;gene=pPE23;Parent=GCA000153685_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898980.1,SO:0001217,UniParc:UPI00000D5EC8,UniRef:UniRef100_P9WI17,UniRef:UniRef50_P9WI17,UniRef:UniRef90_P9WI17
contig_1	Pyrodigal	gene	1926951	1927190	.	-	.	ID=GCA000153685_01793_gene;locus_tag=GCA000153685_01793
contig_1	Pyrodigal	CDS	1926951	1927190	.	-	0	ID=GCA000153685_01793;Name=Transmembrane protein;locus_tag=GCA000153685_01793;product=Transmembrane protein;Parent=GCA000153685_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E319A1,UniRef:UniRef100_A0A0E7SF76,UniRef:UniRef50_A0A0E7SF76,UniRef:UniRef90_A0A0E7SF76
contig_1	Pyrodigal	gene	1927470	1927637	.	-	.	ID=GCA000153685_01794_gene;locus_tag=GCA000153685_01794
contig_1	Pyrodigal	CDS	1927470	1927637	.	-	0	ID=GCA000153685_01794;Name=Integral membrane protein;locus_tag=GCA000153685_01794;product=Integral membrane protein;Parent=GCA000153685_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408420.1,SO:0001217,UniParc:UPI00001A902A,UniRef:UniRef100_Q79FL4,UniRef:UniRef50_Q79FL4,UniRef:UniRef90_Q79FL4
contig_1	Pyrodigal	gene	1927870	1929330	.	+	.	ID=GCA000153685_01795_gene;locus_tag=GCA000153685_01795
contig_1	Pyrodigal	CDS	1927870	1929330	.	+	0	ID=GCA000153685_01795;Name=Transmembrane protein;locus_tag=GCA000153685_01795;product=Transmembrane protein;Parent=GCA000153685_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03321,RefSeq:WP_003898981.1,SO:0001217,UniParc:UPI00000D604D,UniRef:UniRef100_A5U366,UniRef:UniRef50_J8Z1W7,UniRef:UniRef90_A0A0U0R247
contig_1	Pyrodigal	gene	1929441	1930304	.	+	.	ID=GCA000153685_01796_gene;locus_tag=GCA000153685_01796
contig_1	Pyrodigal	CDS	1929441	1930304	.	+	0	ID=GCA000153685_01796;Name=putative protein Rv1708;locus_tag=GCA000153685_01796;product=putative protein Rv1708;Dbxref=GO:0005524,GO:0005886,GO:0043590;Parent=GCA000153685_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03496,RefSeq:WP_003911586.1,SO:0001217,UniParc:UPI00005EE5A8,UniRef:UniRef100_P9WLT1,UniRef:UniRef50_P9WLT1,UniRef:UniRef90_P9WLT1
contig_1	Pyrodigal	gene	1930301	1931137	.	+	.	ID=GCA000153685_01797_gene;locus_tag=GCA000153685_01797
contig_1	Pyrodigal	CDS	1930301	1931137	.	+	0	ID=GCA000153685_01797;Name=Segregation and condensation protein A;locus_tag=GCA000153685_01797;product=Segregation and condensation protein A;Parent=GCA000153685_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408432.1,SO:0001217,UniParc:UPI00000D1028,UniRef:UniRef100_O33208,UniRef:UniRef50_A0A7I7PJD3,UniRef:UniRef90_O33208
contig_1	Pyrodigal	gene	1931134	1931829	.	+	.	ID=GCA000153685_01798_gene;locus_tag=GCA000153685_01798;gene=scpB
contig_1	Pyrodigal	CDS	1931134	1931829	.	+	0	ID=GCA000153685_01798;Name=SMC-Scp complex subunit ScpB;locus_tag=GCA000153685_01798;product=SMC-Scp complex subunit ScpB;Dbxref=GO:0005515,GO:0007059;gene=scpB;Parent=GCA000153685_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06024,RefSeq:WP_003408436.1,SO:0001217,UniParc:UPI00000D11E9,UniRef:UniRef100_I6XCB2,UniRef:UniRef50_U5E3F2,UniRef:UniRef90_I6XCB2
contig_1	Pyrodigal	gene	1931829	1932590	.	+	.	ID=GCA000153685_01799_gene;locus_tag=GCA000153685_01799
contig_1	Pyrodigal	CDS	1931829	1932590	.	+	0	ID=GCA000153685_01799;Name=putative RNA pseudouridine synthase Rv1711;locus_tag=GCA000153685_01799;product=putative RNA pseudouridine synthase Rv1711;Dbxref=GO:0000455,GO:0003723,GO:0120159;Parent=GCA000153685_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06178,SO:0001217,UniParc:UPI00005EE5A9,UniRef:UniRef100_P9WHQ1,UniRef:UniRef50_O05668,UniRef:UniRef90_P9WHQ1;ec_number=5.4.99.-
contig_1	Pyrodigal	gene	1932587	1933279	.	+	.	ID=GCA000153685_01800_gene;locus_tag=GCA000153685_01800;gene=cmk
contig_1	Pyrodigal	CDS	1932587	1933279	.	+	0	ID=GCA000153685_01800;Name=(d)CMP kinase;locus_tag=GCA000153685_01800;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000153685_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408441.1,SO:0001217,UniParc:UPI000012DCF2,UniRef:UniRef100_P9WPA9,UniRef:UniRef50_P9WPA9,UniRef:UniRef90_P9WPA9;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	1933276	1934667	.	+	.	ID=GCA000153685_01801_gene;locus_tag=GCA000153685_01801;gene=der
contig_1	Pyrodigal	CDS	1933276	1934667	.	+	0	ID=GCA000153685_01801;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000153685_01801;product=ribosome biogenesis GTPase Der;Dbxref=GO:0005525,GO:0005886,GO:0009274,GO:0016887,GO:0042254,GO:0043022;gene=der;Parent=GCA000153685_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898984.1,SO:0001217,UniParc:UPI0000129EFC,UniRef:UniRef100_P9WNL3,UniRef:UniRef50_P9WNL3,UniRef:UniRef90_P9WNL3
contig_1	Pyrodigal	gene	1934850	1935653	.	+	.	ID=GCA000153685_01802_gene;locus_tag=GCA000153685_01802
contig_1	Pyrodigal	CDS	1934850	1935653	.	+	0	ID=GCA000153685_01802;Name=putative oxidoreductase Rv1714;locus_tag=GCA000153685_01802;product=putative oxidoreductase Rv1714;Dbxref=GO:0005829,GO:0016491;Parent=GCA000153685_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911619.1,SO:0001217,UniParc:UPI00005EE5AB,UniRef:UniRef100_P9WGQ3,UniRef:UniRef50_P9WGQ3,UniRef:UniRef90_P9WGQ3;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	1935647	1936561	.	+	.	ID=GCA000153685_01803_gene;locus_tag=GCA000153685_01803
contig_1	Pyrodigal	CDS	1935647	1936561	.	+	0	ID=GCA000153685_01803;Name=3-hydroxyacyl-CoA dehydrogenase family protein;locus_tag=GCA000153685_01803;product=3-hydroxyacyl-CoA dehydrogenase family protein;Parent=GCA000153685_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898985.1,SO:0001217,UniParc:UPI00000D5E40,UniRef:UniRef100_A5U374,UniRef:UniRef50_A0A1Q5LDM7,UniRef:UniRef90_A5U374
contig_1	Pyrodigal	gene	1936564	1937394	.	+	.	ID=GCA000153685_01804_gene;locus_tag=GCA000153685_01804
contig_1	Pyrodigal	CDS	1936564	1937394	.	+	0	ID=GCA000153685_01804;Name=Kynurenine formamidase;locus_tag=GCA000153685_01804;product=Kynurenine formamidase;Parent=GCA000153685_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408448.1,SO:0001217,UniParc:UPI0000165073,UniRef:UniRef100_A0A1R3XZ58,UniRef:UniRef50_A0AA36MIU5,UniRef:UniRef90_A0A498Q1E8
contig_1	Pyrodigal	gene	1937394	1937744	.	+	.	ID=GCA000153685_01805_gene;locus_tag=GCA000153685_01805
contig_1	Pyrodigal	CDS	1937394	1937744	.	+	0	ID=GCA000153685_01805;Name=Beta-D-galactosidase Rv1717;locus_tag=GCA000153685_01805;product=Beta-D-galactosidase Rv1717;Dbxref=GO:0005576,GO:0016798;Parent=GCA000153685_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898986.1,SO:0001217,UniParc:UPI00000D109D,UniRef:UniRef100_O86372,UniRef:UniRef50_O86372,UniRef:UniRef90_O86372;ec_number=3.2.1.23
contig_1	Pyrodigal	gene	1937797	1938615	.	+	.	ID=GCA000153685_01806_gene;locus_tag=GCA000153685_01806
contig_1	Pyrodigal	CDS	1937797	1938615	.	+	0	ID=GCA000153685_01806;Name=3-keto-5-aminohexanoate cleavage protein;locus_tag=GCA000153685_01806;product=3-keto-5-aminohexanoate cleavage protein;Parent=GCA000153685_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408456.1,SO:0001217,UniParc:UPI00000C14AC,UniRef:UniRef100_P71976,UniRef:UniRef50_Q5YUM6,UniRef:UniRef90_P71976
contig_1	Pyrodigal	gene	1938629	1939408	.	+	.	ID=GCA000153685_01807_gene;locus_tag=GCA000153685_01807
contig_1	Pyrodigal	CDS	1938629	1939408	.	+	0	ID=GCA000153685_01807;Name=HTH-type transcriptional regulator Rv1719;locus_tag=GCA000153685_01807;product=HTH-type transcriptional regulator Rv1719;Dbxref=GO:0003677,GO:0003700,GO:0045892;Parent=GCA000153685_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408460.1,SO:0001217,UniParc:UPI00000D5E4A,UniRef:UniRef100_P71977,UniRef:UniRef50_P71977,UniRef:UniRef90_P71977
contig_1	Pyrodigal	gene	1939405	1939512	.	+	.	ID=GCA000153685_01808_gene;locus_tag=GCA000153685_01808
contig_1	Pyrodigal	CDS	1939405	1939512	.	+	0	ID=GCA000153685_01808;Name=hypothetical protein;locus_tag=GCA000153685_01808;product=hypothetical protein;Parent=GCA000153685_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2C46,UniRef:UniRef100_Q8VJY6,UniRef:UniRef50_Q8VJY6,UniRef:UniRef90_Q8VJY6
contig_1	tRNAscan-SE	gene	1939601	1939674	.	+	.	ID=GCA000153685_01809_gene;locus_tag=GCA000153685_01809;gene=trnP
contig_1	tRNAscan-SE	tRNA	1939601	1939674	.	+	.	ID=GCA000153685_01809;Name=tRNA-Pro(ggg);locus_tag=GCA000153685_01809;product=tRNA-Pro(ggg);gene=trnP;anti_codon=ggg;amino_acid=Pro;Parent=GCA000153685_01809_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	Pyrodigal	gene	1940018	1940407	.	-	.	ID=GCA000153685_01810_gene;locus_tag=GCA000153685_01810;gene=vapC12
contig_1	Pyrodigal	CDS	1940018	1940407	.	-	0	ID=GCA000153685_01810;Name=Ribonuclease VapC12;locus_tag=GCA000153685_01810;product=Ribonuclease VapC12;Dbxref=GO:0000287,GO:0004540;gene=vapC12;Parent=GCA000153685_01810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408465.1,SO:0001217,UniParc:UPI00000D1161,UniRef:UniRef100_P9WFA3,UniRef:UniRef50_P9WFA3,UniRef:UniRef90_P9WFA3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1940404	1940631	.	-	.	ID=GCA000153685_01811_gene;locus_tag=GCA000153685_01811;gene=vapB12
contig_1	Pyrodigal	CDS	1940404	1940631	.	-	0	ID=GCA000153685_01811;Name=Putative antitoxin VapB12;locus_tag=GCA000153685_01811;product=Putative antitoxin VapB12;Dbxref=GO:0006355;gene=vapB12;Parent=GCA000153685_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408469.1,SO:0001217,UniParc:UPI00000D2C48,UniRef:UniRef100_P9WJ53,UniRef:UniRef50_P9WJ53,UniRef:UniRef90_P9WJ53
contig_1	Pyrodigal	gene	1940849	1942333	.	+	.	ID=GCA000153685_01812_gene;locus_tag=GCA000153685_01812
contig_1	Pyrodigal	CDS	1940849	1942333	.	+	0	ID=GCA000153685_01812;Name=biotin carboxylase;locus_tag=GCA000153685_01812;product=biotin carboxylase;Dbxref=GO:0005524,GO:0046872;Parent=GCA000153685_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408473.1,SO:0001217,UniParc:UPI00000D0F3C,UniRef:UniRef100_P71980,UniRef:UniRef50_R4LY12,UniRef:UniRef90_A0A655BGQ2
contig_1	Pyrodigal	gene	1942330	1943577	.	+	.	ID=GCA000153685_01813_gene;locus_tag=GCA000153685_01813
contig_1	Pyrodigal	CDS	1942330	1943577	.	+	0	ID=GCA000153685_01813;Name=Hydrolase;locus_tag=GCA000153685_01813;product=Hydrolase;Parent=GCA000153685_01813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408476.1,SO:0001217,UniParc:UPI00000D5F1E,UniRef:UniRef100_A5U382,UniRef:UniRef50_A0A655AFE1,UniRef:UniRef90_A0A655AFE1
contig_1	Pyrodigal	gene	1943620	1944036	.	-	.	ID=GCA000153685_01814_gene;locus_tag=GCA000153685_01814
contig_1	Pyrodigal	CDS	1943620	1944036	.	-	0	ID=GCA000153685_01814;Name=DUF402 domain-containing protein;locus_tag=GCA000153685_01814;product=DUF402 domain-containing protein;Parent=GCA000153685_01814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001277FDE,UniRef:UniRef100_A0A0E8UCX0,UniRef:UniRef50_A0A7I7MP09,UniRef:UniRef90_P71982
contig_1	Pyrodigal	gene	1944029	1944739	.	-	.	ID=GCA000153685_01815_gene;locus_tag=GCA000153685_01815
contig_1	Pyrodigal	CDS	1944029	1944739	.	-	0	ID=GCA000153685_01815;Name=HTH hxlR-type domain-containing protein;locus_tag=GCA000153685_01815;product=HTH hxlR-type domain-containing protein;Parent=GCA000153685_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408486.1,SO:0001217,UniParc:UPI00000C14EC,UniRef:UniRef100_P71983,UniRef:UniRef50_P71983,UniRef:UniRef90_P71983
contig_1	Pyrodigal	gene	1944840	1946225	.	+	.	ID=GCA000153685_01816_gene;locus_tag=GCA000153685_01816
contig_1	Pyrodigal	CDS	1944840	1946225	.	+	0	ID=GCA000153685_01816;Name=Oxidoreductase;locus_tag=GCA000153685_01816;product=Oxidoreductase;Parent=GCA000153685_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900395.1,SO:0001217,UniParc:UPI00000D5F13,UniRef:UniRef100_A5U385,UniRef:UniRef50_A0A655DFG8,UniRef:UniRef90_A0A655DFG8
contig_1	Infernal	gene	1945279	1945355	.	-	.	ID=GCA000153685_01817_gene;locus_tag=GCA000153685_01817;gene=AS1726
contig_1	Infernal	ncRNA	1945279	1945355	5.3e-17	-	.	ID=GCA000153685_01817;Name=AS1726 sRNA;locus_tag=GCA000153685_01817;product=AS1726 sRNA;Dbxref=RFAM:RF01779;Parent=GCA000153685_01817_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01779
contig_1	Pyrodigal	gene	1946258	1946827	.	+	.	ID=GCA000153685_01818_gene;locus_tag=GCA000153685_01818
contig_1	Pyrodigal	CDS	1946258	1946827	.	+	0	ID=GCA000153685_01818;Name=Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein;locus_tag=GCA000153685_01818;product=Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein;Parent=GCA000153685_01818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408493.1,SO:0001217,UniParc:UPI00000D1048,UniRef:UniRef100_P71985,UniRef:UniRef50_P71985,UniRef:UniRef90_P71985
contig_1	Pyrodigal	gene	1946852	1947622	.	-	.	ID=GCA000153685_01819_gene;locus_tag=GCA000153685_01819
contig_1	Pyrodigal	CDS	1946852	1947622	.	-	0	ID=GCA000153685_01819;Name=Glycoside hydrolase;locus_tag=GCA000153685_01819;product=Glycoside hydrolase;Parent=GCA000153685_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408495.1,SO:0001217,UniParc:UPI00001652A4,UniRef:UniRef100_P71986,UniRef:UniRef50_A0A3S4BI46,UniRef:UniRef90_P71986
contig_1	Pyrodigal	gene	1947619	1948557	.	-	.	ID=GCA000153685_01820_gene;locus_tag=GCA000153685_01820
contig_1	Pyrodigal	CDS	1947619	1948557	.	-	0	ID=GCA000153685_01820;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_1739;locus_tag=GCA000153685_01820;product=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_1739;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408497.1,SO:0001217,UniParc:UPI00000D1160,UniRef:UniRef100_P9WFH9,UniRef:UniRef50_P9WFH9,UniRef:UniRef90_P9WFH9;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1948737	1950089	.	-	.	ID=GCA000153685_01821_gene;locus_tag=GCA000153685_01821
contig_1	Pyrodigal	CDS	1948737	1950089	.	-	0	ID=GCA000153685_01821;Name=Penicillin-binding protein 4;locus_tag=GCA000153685_01821;product=Penicillin-binding protein 4;Parent=GCA000153685_01821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5B1,UniRef:UniRef100_P71988,UniRef:UniRef50_A0A2S6NKW8,UniRef:UniRef90_A0A655A0W5
contig_1	Pyrodigal	gene	1950722	1952278	.	+	.	ID=GCA000153685_01822_gene;locus_tag=GCA000153685_01822;gene=gabD2
contig_1	Pyrodigal	CDS	1950722	1952278	.	+	0	ID=GCA000153685_01822;Name=succinic semialdehyde dehydrogenase;locus_tag=GCA000153685_01822;product=succinic semialdehyde dehydrogenase;Dbxref=GO:0036243;gene=gabD2;Parent=GCA000153685_01822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_003898989.1,SO:0001217,UniParc:UPI00000D6022,UniRef:UniRef100_P9WNX7,UniRef:UniRef50_P9WNX7,UniRef:UniRef90_P9WNX7;ec_number=1.2.1.79
contig_1	Pyrodigal	gene	1952288	1952818	.	-	.	ID=GCA000153685_01823_gene;locus_tag=GCA000153685_01823;gene=resA
contig_1	Pyrodigal	CDS	1952288	1952818	.	-	0	ID=GCA000153685_01823;Name=Thiol-disulfide oxidoreductase ResA;locus_tag=GCA000153685_01823;product=Thiol-disulfide oxidoreductase ResA;gene=resA;Parent=GCA000153685_01823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D302,UniRef:UniRef100_P71990,UniRef:UniRef50_A0A0G3EL37,UniRef:UniRef90_A0A0E4GYJ3
contig_1	Pyrodigal	gene	1952900	1953496	.	-	.	ID=GCA000153685_01824_gene;locus_tag=GCA000153685_01824
contig_1	Pyrodigal	CDS	1952900	1953496	.	-	0	ID=GCA000153685_01824;Name=putative membrane protein Rv1733c;locus_tag=GCA000153685_01824;product=putative membrane protein Rv1733c;Dbxref=GO:0005886;Parent=GCA000153685_01824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_048657341.1,SO:0001217,UniParc:UPI0002E84852,UniRef:UniRef100_A0A0H3L9V8,UniRef:UniRef50_P9WLS9,UniRef:UniRef90_P9WLS9
contig_1	Pyrodigal	gene	1953761	1953856	.	+	.	ID=GCA000153685_01825_gene;locus_tag=GCA000153685_01825
contig_1	Pyrodigal	CDS	1953761	1953856	.	+	0	ID=GCA000153685_01825;Name=hypothetical protein;locus_tag=GCA000153685_01825;product=hypothetical protein;Parent=GCA000153685_01825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42BA,UniRef:UniRef100_A0A0E9AJS4,UniRef:UniRef50_A0A0E9AJS4,UniRef:UniRef90_A0A0E9AJS4
contig_1	Pyrodigal	gene	1953819	1954061	.	-	.	ID=GCA000153685_01826_gene;locus_tag=GCA000153685_01826
contig_1	Pyrodigal	CDS	1953819	1954061	.	-	0	ID=GCA000153685_01826;Name=putative protein Rv1734c;locus_tag=GCA000153685_01826;product=putative protein Rv1734c;Dbxref=GO:0016746;Parent=GCA000153685_01826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408509.1,SO:0001217,UniParc:UPI00000C14B0,UniRef:UniRef100_P9WLS7,UniRef:UniRef50_P9WLS7,UniRef:UniRef90_P9WLS7
contig_1	Pyrodigal	gene	1954203	1954403	.	+	.	ID=GCA000153685_01827_gene;locus_tag=GCA000153685_01827
contig_1	Pyrodigal	CDS	1954203	1954403	.	+	0	ID=GCA000153685_01827;Name=Integral membrane protein;locus_tag=GCA000153685_01827;product=Integral membrane protein;Parent=GCA000153685_01827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C54FF0,UniRef:UniRef100_A0A0E8VFF3,UniRef:UniRef50_A0A0U0R6M1,UniRef:UniRef90_A0A0U0R6M1
contig_1	Pyrodigal	gene	1954336	1954929	.	-	.	ID=GCA000153685_01828_gene;locus_tag=GCA000153685_01828
contig_1	Pyrodigal	CDS	1954336	1954929	.	-	0	ID=GCA000153685_01828;Name=putative membrane protein Rv1735c;locus_tag=GCA000153685_01828;product=putative membrane protein Rv1735c;Dbxref=GO:0005886,GO:0055085;Parent=GCA000153685_01828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898991.1,SO:0001217,UniParc:UPI00000CCBDB,UniRef:UniRef100_P9WLS5,UniRef:UniRef50_P9WLS5,UniRef:UniRef90_P9WLS5
contig_1	Pyrodigal	gene	1954932	1955174	.	-	.	ID=GCA000153685_01829_gene;locus_tag=GCA000153685_01829
contig_1	Pyrodigal	CDS	1954932	1955174	.	-	0	ID=GCA000153685_01829;Name=Integral membrane protein;locus_tag=GCA000153685_01829;product=Integral membrane protein;Parent=GCA000153685_01829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408513.1,SO:0001217,UniParc:UPI00000D2C4E,UniRef:UniRef100_A5U395,UniRef:UniRef50_A5U395,UniRef:UniRef90_A5U395
contig_1	Pyrodigal	gene	1955273	1957231	.	-	.	ID=GCA000153685_01830_gene;locus_tag=GCA000153685_01830;gene=narI
contig_1	Pyrodigal	CDS	1955273	1957231	.	-	0	ID=GCA000153685_01830;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000153685_01830;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0001666,GO:0005886,GO:0008940,GO:0009325,GO:0016020,GO:0019645,GO:0042128,GO:0046872,GO:0051082,GO:0051131,GO:0051539;gene=narI;Parent=GCA000153685_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00373,RefSeq:WP_003901238.1,SO:0001217,UniParc:UPI00000D6020,UniRef:UniRef100_P9WJQ1,UniRef:UniRef50_P9WJQ1,UniRef:UniRef90_P9WJQ1;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	1957228	1958415	.	-	.	ID=GCA000153685_01831_gene;locus_tag=GCA000153685_01831;gene=narK
contig_1	Pyrodigal	CDS	1957228	1958415	.	-	0	ID=GCA000153685_01831;Name=nitrate transporter NarK;locus_tag=GCA000153685_01831;product=nitrate transporter NarK;Dbxref=GO:0001666,GO:0005886,GO:0015112,GO:0042128,GO:0090352;gene=narK;Parent=GCA000153685_01831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000019827,BlastRules:WP_000841851,BlastRules:WP_003898992,BlastRules:WP_010886631,KEGG:K02575,RefSeq:WP_003898992.1,SO:0001217,UniParc:UPI00000D6008,UniRef:UniRef100_P9WJY7,UniRef:UniRef50_P9WJY7,UniRef:UniRef90_P9WJY7
contig_1	Pyrodigal	gene	1958654	1958986	.	+	.	ID=GCA000153685_01832_gene;locus_tag=GCA000153685_01832
contig_1	Pyrodigal	CDS	1958654	1958986	.	+	0	ID=GCA000153685_01832;Name=putative protein Mb1767;locus_tag=GCA000153685_01832;product=putative protein Mb1767;Dbxref=GO:0005829,GO:0005886,GO:0052572;Parent=GCA000153685_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6245,UniRef:UniRef100_P9WLS3,UniRef:UniRef50_P9WLS3,UniRef:UniRef90_P9WLS3
contig_1	Pyrodigal	gene	1959000	1960670	.	-	.	ID=GCA000153685_01833_gene;locus_tag=GCA000153685_01833
contig_1	Pyrodigal	CDS	1959000	1960670	.	-	0	ID=GCA000153685_01833;Name=putative sulfate transporter Rv1739c;locus_tag=GCA000153685_01833;product=putative sulfate transporter Rv1739c;Dbxref=GO:0000103,GO:0005886,GO:0019001,GO:0055085;Parent=GCA000153685_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03321,RefSeq:WP_031728968.1,SO:0001217,UniParc:UPI0003097967,UniRef:UniRef100_P9WGF6,UniRef:UniRef50_P9WGF7,UniRef:UniRef90_P9WGF7
contig_1	Pyrodigal	gene	1960768	1960962	.	+	.	ID=GCA000153685_01834_gene;locus_tag=GCA000153685_01834;gene=vapB34
contig_1	Pyrodigal	CDS	1960768	1960962	.	+	0	ID=GCA000153685_01834;Name=Putative antitoxin VapB34;locus_tag=GCA000153685_01834;product=Putative antitoxin VapB34;gene=vapB34;Parent=GCA000153685_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5B4,UniRef:UniRef100_P9WJ31,UniRef:UniRef50_P9WJ31,UniRef:UniRef90_P9WJ31
contig_1	Pyrodigal	gene	1960962	1961210	.	+	.	ID=GCA000153685_01835_gene;locus_tag=GCA000153685_01835;gene=vapC34
contig_1	Pyrodigal	CDS	1960962	1961210	.	+	0	ID=GCA000153685_01835;Name=Putative ribonuclease VapC34;locus_tag=GCA000153685_01835;product=Putative ribonuclease VapC34;Dbxref=GO:0004518,GO:0046872;gene=vapC34;Parent=GCA000153685_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19686,RefSeq:WP_003898996.1,SO:0001217,UniParc:UPI00000D1090,UniRef:UniRef100_P9WF71,UniRef:UniRef50_P9WF71,UniRef:UniRef90_P9WF71;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1961218	1961955	.	+	.	ID=GCA000153685_01836_gene;locus_tag=GCA000153685_01836
contig_1	Pyrodigal	CDS	1961218	1961955	.	+	0	ID=GCA000153685_01836;Name=DUF2071 domain-containing protein;locus_tag=GCA000153685_01836;product=DUF2071 domain-containing protein;Parent=GCA000153685_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898997.1,SO:0001217,UniParc:UPI00000D10E1,UniRef:UniRef100_O33271,UniRef:UniRef50_A0A1X2LSY3,UniRef:UniRef90_O33271
contig_1	Pyrodigal	gene	1962049	1963749	.	+	.	ID=GCA000153685_01837_gene;locus_tag=GCA000153685_01837;gene=pknE
contig_1	Pyrodigal	CDS	1962049	1963749	.	+	0	ID=GCA000153685_01837;Name=serine/threonine protein kinase PknE;locus_tag=GCA000153685_01837;product=serine/threonine protein kinase PknE;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005576,GO:0005886,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045717,GO:0051409,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknE;Parent=GCA000153685_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898998,RefSeq:WP_003898998.1,SO:0001217,UniParc:UPI0000131B7A,UniRef:UniRef100_P9WI77,UniRef:UniRef50_P9WI77,UniRef:UniRef90_P9WI77;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1964034	1964435	.	-	.	ID=GCA000153685_01838_gene;locus_tag=GCA000153685_01838
contig_1	Pyrodigal	CDS	1964034	1964435	.	-	0	ID=GCA000153685_01838;Name=Transmembrane protein;locus_tag=GCA000153685_01838;product=Transmembrane protein;Parent=GCA000153685_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408538.1,SO:0001217,UniParc:UPI00001652A6,UniRef:UniRef100_Q7D815,UniRef:UniRef50_Q7D815,UniRef:UniRef90_Q7D815
contig_1	Pyrodigal	gene	1964425	1965036	.	-	.	ID=GCA000153685_01839_gene;locus_tag=GCA000153685_01839;gene=idi
contig_1	Pyrodigal	CDS	1964425	1965036	.	-	0	ID=GCA000153685_01839;Name=isopentenyl-diphosphate Delta-isomerase;locus_tag=GCA000153685_01839;product=isopentenyl-diphosphate Delta-isomerase;Dbxref=GO:0004452,GO:0005737,GO:0008299,GO:0046872,GO:0050992;gene=idi;Parent=GCA000153685_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003898999.1,SO:0001217,UniParc:UPI000012D204,UniRef:UniRef100_P9WKK5,UniRef:UniRef50_P9WKK5,UniRef:UniRef90_P9WKK5;ec_number=5.3.3.2
contig_1	Pyrodigal	gene	1965183	1966613	.	+	.	ID=GCA000153685_01840_gene;locus_tag=GCA000153685_01840;gene=pknF
contig_1	Pyrodigal	CDS	1965183	1966613	.	+	0	ID=GCA000153685_01840;Name=serine/threonine protein kinase PknF;locus_tag=GCA000153685_01840;product=serine/threonine protein kinase PknF;Dbxref=GO:0000921,GO:0001558,GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005829,GO:0005886,GO:0010827,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0051055,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknF;Parent=GCA000153685_01840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899000,RefSeq:WP_003899000.1,SO:0001217,UniParc:UPI0000131B7B,UniRef:UniRef100_P9WI75,UniRef:UniRef50_P9WI75,UniRef:UniRef90_P9WI75;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1966681	1969272	.	+	.	ID=GCA000153685_01841_gene;locus_tag=GCA000153685_01841
contig_1	Pyrodigal	CDS	1966681	1969272	.	+	0	ID=GCA000153685_01841;Name=ABC transporter ATP-binding/permease protein Rv1747;locus_tag=GCA000153685_01841;product=ABC transporter ATP-binding/permease protein Rv1747;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0009274,GO:0016020,GO:0016887,GO:0042626,GO:0055085,GO:0140359;Parent=GCA000153685_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165076,UniRef:UniRef100_O65934,UniRef:UniRef50_O65934,UniRef:UniRef90_O65934;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	1969705	1970376	.	+	.	ID=GCA000153685_01842_gene;locus_tag=GCA000153685_01842
contig_1	Pyrodigal	CDS	1969705	1970376	.	+	0	ID=GCA000153685_01842;Name=DUF4129 domain-containing protein;locus_tag=GCA000153685_01842;product=DUF4129 domain-containing protein;Parent=GCA000153685_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899001.1,SO:0001217,UniParc:UPI00005EE5B5,UniRef:UniRef100_A0A0H3LGC5,UniRef:UniRef50_B2HSP6,UniRef:UniRef90_P72005
contig_1	Pyrodigal	gene	1970373	1970864	.	-	.	ID=GCA000153685_01843_gene;locus_tag=GCA000153685_01843
contig_1	Pyrodigal	CDS	1970373	1970864	.	-	0	ID=GCA000153685_01843;Name=putative integral membrane protein;locus_tag=GCA000153685_01843;product=putative integral membrane protein;Parent=GCA000153685_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000528AFF,UniRef:UniRef100_O65935,UniRef:UniRef50_A0A1G8P5U4,UniRef:UniRef90_O65935
contig_1	Pyrodigal	gene	1971014	1972612	.	-	.	ID=GCA000153685_01844_gene;locus_tag=GCA000153685_01844;gene=fadD1
contig_1	Pyrodigal	CDS	1971014	1972612	.	-	0	ID=GCA000153685_01844;Name=fatty-acid--CoA ligase FadD1;locus_tag=GCA000153685_01844;product=fatty-acid--CoA ligase FadD1;gene=fadD1;Parent=GCA000153685_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408558.1,SO:0001217,UniParc:UPI00000D5FDB,UniRef:UniRef100_P72007,UniRef:UniRef50_A0A2X4U4D4,UniRef:UniRef90_P72007
contig_1	Pyrodigal	gene	1972810	1974048	.	+	.	ID=GCA000153685_01845_gene;locus_tag=GCA000153685_01845
contig_1	Pyrodigal	CDS	1972810	1974048	.	+	0	ID=GCA000153685_01845;Name=FAD-binding domain-containing protein;locus_tag=GCA000153685_01845;product=FAD-binding domain-containing protein;Parent=GCA000153685_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911631.1,SO:0001217,UniParc:UPI0000165077,UniRef:UniRef100_A5U3B1,UniRef:UniRef50_A0A1Q9S5E7,UniRef:UniRef90_A5U3B1
contig_1	Pyrodigal	gene	1974386	1974592	.	+	.	ID=GCA000153685_01846_gene;locus_tag=GCA000153685_01846
contig_1	Pyrodigal	CDS	1974386	1974592	.	+	0	ID=GCA000153685_01846;Name=Oxidoreductase;locus_tag=GCA000153685_01846;product=Oxidoreductase;Parent=GCA000153685_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62942,UniRef:UniRef100_A0A0H3LAJ4,UniRef:UniRef50_A0A0H3LAJ4,UniRef:UniRef90_A0A0H3LAJ4
contig_1	Pyrodigal	gene	1974659	1977811	.	-	.	ID=GCA000153685_01847_gene;locus_tag=GCA000153685_01847;gene=pPE24
contig_1	Pyrodigal	CDS	1974659	1977811	.	-	0	ID=GCA000153685_01847;Name=putative PPE family protein PPE24;locus_tag=GCA000153685_01847;product=putative PPE family protein PPE24;Dbxref=GO:0052572;gene=pPE24;Parent=GCA000153685_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900398.1,SO:0001217,UniParc:UPI0001277FF7,UniRef:UniRef100_UPI0001277FF7,UniRef:UniRef50_P9WI15,UniRef:UniRef90_P9WI15
contig_1	Pyrodigal	gene	1978015	1979526	.	-	.	ID=GCA000153685_01848_gene;locus_tag=GCA000153685_01848
contig_1	Pyrodigal	CDS	1978015	1979526	.	-	0	ID=GCA000153685_01848;Name=DUF4185 domain-containing protein;locus_tag=GCA000153685_01848;product=DUF4185 domain-containing protein;Parent=GCA000153685_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27495,RefSeq:WP_003906670.1,SO:0001217,UniParc:UPI0000EF4826,UniRef:UniRef100_A0A0H3L9B9,UniRef:UniRef50_A0A1X1Y4G7,UniRef:UniRef90_A0A0H3M4N2;ec_number=3.2.1.226
contig_1	Pyrodigal	gene	1979714	1980040	.	+	.	ID=GCA000153685_01849_gene;locus_tag=GCA000153685_01849;gene=tnp
contig_1	Pyrodigal	CDS	1979714	1980040	.	+	0	ID=GCA000153685_01849;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_01849;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	1980091	1980975	.	+	.	ID=GCA000153685_01850_gene;locus_tag=GCA000153685_01850;gene=tnp
contig_1	Pyrodigal	CDS	1980091	1980975	.	+	0	ID=GCA000153685_01850;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_01850;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	1981017	1981253	.	+	.	ID=GCA000153685_01851_gene;locus_tag=GCA000153685_01851
contig_1	Pyrodigal	CDS	1981017	1981253	.	+	0	ID=GCA000153685_01851;Name=hypothetical protein;locus_tag=GCA000153685_01851;product=hypothetical protein;Parent=GCA000153685_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A823A6,UniRef:UniRef100_A0A654TKR5,UniRef:UniRef50_A0A654TKR5,UniRef:UniRef90_A0A654TKR5
contig_1	Pyrodigal	gene	1981250	1982794	.	-	.	ID=GCA000153685_01852_gene;locus_tag=GCA000153685_01852;gene=plcD
contig_1	Pyrodigal	CDS	1981250	1982794	.	-	0	ID=GCA000153685_01852;Name=Phospholipase C D;locus_tag=GCA000153685_01852;product=Phospholipase C D;Dbxref=GO:0005576,GO:0034480;gene=plcD;Parent=GCA000153685_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01114,RefSeq:WP_003900400.1,SO:0001217,UniParc:UPI0000131985,UniRef:UniRef100_P0A5R9,UniRef:UniRef50_P9WIB3,UniRef:UniRef90_P9WIA9;ec_number=3.1.4.3
contig_1	Pyrodigal	gene	1982923	1984068	.	-	.	ID=GCA000153685_01853_gene;locus_tag=GCA000153685_01853;gene=pimC
contig_1	Pyrodigal	CDS	1982923	1984068	.	-	0	ID=GCA000153685_01853;Name=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase;locus_tag=GCA000153685_01853;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase;Dbxref=GO:0009247,GO:0016020,GO:0033164,GO:0043750,GO:0046474,GO:0046488,GO:0047264;gene=pimC;Parent=GCA000153685_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14335,RefSeq:WP_003899004.1,SO:0001217,UniParc:UPI00000D2B17,UniRef:UniRef100_A5U3B9,UniRef:UniRef50_A5U3B9,UniRef:UniRef90_A5U3B9;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	1984294	1985397	.	+	.	ID=GCA000153685_01854_gene;locus_tag=GCA000153685_01854
contig_1	Pyrodigal	CDS	1984294	1985397	.	+	0	ID=GCA000153685_01854;Name=Sulfite oxidase;locus_tag=GCA000153685_01854;product=Sulfite oxidase;Parent=GCA000153685_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911638.1,SO:0001217,UniParc:UPI00000B60B4,UniRef:UniRef100_A0A1R3XZ93,UniRef:UniRef50_I4BG67,UniRef:UniRef90_A0A654ZT13
contig_1	Pyrodigal	gene	1985598	1988435	.	+	.	ID=GCA000153685_01855_gene;locus_tag=GCA000153685_01855
contig_1	Pyrodigal	CDS	1985598	1988435	.	+	0	ID=GCA000153685_01855;Name=Transmembrane transport protein MmpL14;locus_tag=GCA000153685_01855;product=Transmembrane transport protein MmpL14;Parent=GCA000153685_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900401.1,SO:0001217,UniParc:UPI00000D2B16,UniRef:UniRef100_W8CEU3,UniRef:UniRef50_A0A0I9TZ35,UniRef:UniRef90_A5U3C1
contig_1	Pyrodigal	gene	1988756	1989412	.	+	.	ID=GCA000153685_01856_gene;locus_tag=GCA000153685_01856;gene=cut1
contig_1	Pyrodigal	CDS	1988756	1989412	.	+	0	ID=GCA000153685_01856;Name=cutinase Cut1;locus_tag=GCA000153685_01856;product=cutinase Cut1;gene=cut1;Parent=GCA000153685_01856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_015288154,RefSeq:WP_015456299.1,SO:0001217,UniParc:UPI000169A5D2,UniRef:UniRef100_A0A0H3LAJ7,UniRef:UniRef50_O06793,UniRef:UniRef90_A0A0H3LAJ7
contig_1	Pyrodigal	gene	1989679	1992333	.	-	.	ID=GCA000153685_01857_gene;locus_tag=GCA000153685_01857;gene=wag22
contig_1	Pyrodigal	CDS	1989679	1992333	.	-	0	ID=GCA000153685_01857;Name=WAG22 antigen;locus_tag=GCA000153685_01857;product=WAG22 antigen;Dbxref=GO:0005576;gene=wag22;Parent=GCA000153685_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031728802.1,SO:0001217,UniParc:UPI00045A39EE,UniRef:UniRef100_A0AA44RL01,UniRef:UniRef50_P9WIG5,UniRef:UniRef90_P9WIG5
contig_1	Pyrodigal	gene	1993011	1994417	.	+	.	ID=GCA000153685_01858_gene;locus_tag=GCA000153685_01858
contig_1	Pyrodigal	CDS	1993011	1994417	.	+	0	ID=GCA000153685_01858;Name=Putative diacyglycerol O-acyltransferase Rv1760;locus_tag=GCA000153685_01858;product=Putative diacyglycerol O-acyltransferase Rv1760;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0045017,GO:0051701,GO:0071731;Parent=GCA000153685_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456304.1,SO:0001217,UniParc:UPI000252D211,UniRef:UniRef100_A0A0H3LGD8,UniRef:UniRef50_P9WKB9,UniRef:UniRef90_P9WKB9;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	1994427	1994810	.	-	.	ID=GCA000153685_01859_gene;locus_tag=GCA000153685_01859
contig_1	Pyrodigal	CDS	1994427	1994810	.	-	0	ID=GCA000153685_01859;Name=putative exported protein;locus_tag=GCA000153685_01859;product=putative exported protein;Parent=GCA000153685_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899008.1,SO:0001217,UniParc:UPI00000D0F54,UniRef:UniRef100_O06796,UniRef:UniRef50_A0A2U3N638,UniRef:UniRef90_O06796
contig_1	Pyrodigal	gene	1994810	1995598	.	-	.	ID=GCA000153685_01860_gene;locus_tag=GCA000153685_01860
contig_1	Pyrodigal	CDS	1994810	1995598	.	-	0	ID=GCA000153685_01860;Name=Encapsulin nanocompartment protein Rv1762c;locus_tag=GCA000153685_01860;product=Encapsulin nanocompartment protein Rv1762c;Dbxref=GO:0005886,GO:0140737;Parent=GCA000153685_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899009.1,SO:0001217,UniParc:UPI00000D1194,UniRef:UniRef100_O06797,UniRef:UniRef50_O06797,UniRef:UniRef90_O06797
contig_1	Pyrodigal	gene	1995738	1996199	.	-	.	ID=GCA000153685_01861_gene;locus_tag=GCA000153685_01861
contig_1	Pyrodigal	CDS	1995738	1996199	.	-	0	ID=GCA000153685_01861;Name=Transmembrane protein;locus_tag=GCA000153685_01861;product=Transmembrane protein;Parent=GCA000153685_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C596AB,UniRef:UniRef100_A0A0E7U2P0,UniRef:UniRef50_I4BHV4,UniRef:UniRef90_A0A0H3LDR9
contig_1	Pyrodigal	gene	1996616	1997872	.	-	.	ID=GCA000153685_01862_gene;locus_tag=GCA000153685_01862
contig_1	Pyrodigal	CDS	1996616	1997872	.	-	0	ID=GCA000153685_01862;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_01862;product=HNH nuclease domain-containing protein;Parent=GCA000153685_01862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410095.1,SO:0001217,UniParc:UPI0000165079,UniRef:UniRef100_O53461,UniRef:UniRef50_O53461,UniRef:UniRef90_O53461
contig_1	Pyrodigal	gene	1999094	1999363	.	+	.	ID=GCA000153685_01863_gene;locus_tag=GCA000153685_01863;gene=csoR
contig_1	Pyrodigal	CDS	1999094	1999363	.	+	0	ID=GCA000153685_01863;Name=Copper-sensing transcriptional repressor CsoR;locus_tag=GCA000153685_01863;product=Copper-sensing transcriptional repressor CsoR;gene=csoR;Parent=GCA000153685_01863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899012.1,SO:0001217,UniParc:UPI00000CCB22,UniRef:UniRef100_O06799,UniRef:UniRef50_Q9RD62,UniRef:UniRef90_R4M7G3
contig_1	Pyrodigal	gene	1999401	1999790	.	+	.	ID=GCA000153685_01864_gene;locus_tag=GCA000153685_01864
contig_1	Pyrodigal	CDS	1999401	1999790	.	+	0	ID=GCA000153685_01864;Name=Conserved protein;locus_tag=GCA000153685_01864;product=Conserved protein;Parent=GCA000153685_01864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003468E55,UniRef:UniRef100_O06800,UniRef:UniRef50_G7GTJ2,UniRef:UniRef90_O06800
contig_1	Pyrodigal	gene	1999971	2001827	.	+	.	ID=GCA000153685_01865_gene;locus_tag=GCA000153685_01865
contig_1	Pyrodigal	CDS	1999971	2001827	.	+	0	ID=GCA000153685_01865;Name=PE-PGRS family protein PE_PGRS31;locus_tag=GCA000153685_01865;product=PE-PGRS family protein PE_PGRS31;Parent=GCA000153685_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003905649.1,SO:0001217,UniParc:UPI00000C1580,UniRef:UniRef100_Q79FK9,UniRef:UniRef50_A0A7I7MMN5,UniRef:UniRef90_Q79FK9
contig_1	Pyrodigal	gene	2002025	2003227	.	+	.	ID=GCA000153685_01866_gene;locus_tag=GCA000153685_01866
contig_1	Pyrodigal	CDS	2002025	2003227	.	+	0	ID=GCA000153685_01866;Name=Alanine racemase N-terminal domain-containing protein;locus_tag=GCA000153685_01866;product=Alanine racemase N-terminal domain-containing protein;Parent=GCA000153685_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5BD,UniRef:UniRef100_A0A829CF61,UniRef:UniRef50_D7BYW4,UniRef:UniRef90_A0A829CF61
contig_1	Pyrodigal	gene	2003227	2003319	.	+	.	ID=GCA000153685_01867_gene;locus_tag=GCA000153685_01867
contig_1	Pyrodigal	CDS	2003227	2003319	.	+	0	ID=GCA000153685_01867;Name=hypothetical protein;locus_tag=GCA000153685_01867;product=hypothetical protein;Parent=GCA000153685_01867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B44B9D,UniRef:UniRef100_A0A0E8UZE8,UniRef:UniRef50_A0A0E8UZE8,UniRef:UniRef90_A0A0E8UZE8
contig_1	Pyrodigal	gene	2003316	2004521	.	+	.	ID=GCA000153685_01868_gene;locus_tag=GCA000153685_01868
contig_1	Pyrodigal	CDS	2003316	2004521	.	+	0	ID=GCA000153685_01868;Name=Peptidase M28 domain-containing protein;locus_tag=GCA000153685_01868;product=Peptidase M28 domain-containing protein;Parent=GCA000153685_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911655.1,SO:0001217,UniParc:UPI00005EE5BE,UniRef:UniRef100_O06803,UniRef:UniRef50_Q7D7Z9,UniRef:UniRef90_Q7D7Z9
contig_1	Pyrodigal	gene	2004518	2005804	.	+	.	ID=GCA000153685_01869_gene;locus_tag=GCA000153685_01869
contig_1	Pyrodigal	CDS	2004518	2005804	.	+	0	ID=GCA000153685_01869;Name=L-gulono-1%2C4-lactone dehydrogenase;locus_tag=GCA000153685_01869;product=L-gulono-1%2C4-lactone dehydrogenase;Dbxref=GO:0003885,GO:0005886,GO:0009274,GO:0019853,GO:0071949,GO:0080049;Parent=GCA000153685_01869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408749,RefSeq:WP_003408749.1,SO:0001217,UniParc:UPI00000D6045,UniRef:UniRef100_P9WIT3,UniRef:UniRef50_P9WIT3,UniRef:UniRef90_P9WIT3;ec_number=1.1.2.-
contig_1	Pyrodigal	gene	2006020	2006304	.	+	.	ID=GCA000153685_01870_gene;locus_tag=GCA000153685_01870
contig_1	Pyrodigal	CDS	2006020	2006304	.	+	0	ID=GCA000153685_01870;Name=ANTAR domain-containing protein;locus_tag=GCA000153685_01870;product=ANTAR domain-containing protein;Parent=GCA000153685_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF4830,UniRef:UniRef100_O06805,UniRef:UniRef50_O06805,UniRef:UniRef90_O06805
contig_1	Pyrodigal	gene	2006377	2007072	.	-	.	ID=GCA000153685_01871_gene;locus_tag=GCA000153685_01871;gene=iclR
contig_1	Pyrodigal	CDS	2006377	2007072	.	-	0	ID=GCA000153685_01871;Name=IclR family transcriptional regulator;locus_tag=GCA000153685_01871;product=IclR family transcriptional regulator;gene=iclR;Parent=GCA000153685_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F624F,UniRef:UniRef100_A0A0E9ATW4,UniRef:UniRef50_A0A448IFB3,UniRef:UniRef90_A0A0T5Y622
contig_1	Pyrodigal	gene	2007189	2008529	.	+	.	ID=GCA000153685_01872_gene;locus_tag=GCA000153685_01872
contig_1	Pyrodigal	CDS	2007189	2008529	.	+	0	ID=GCA000153685_01872;Name=Oxidoreductase;locus_tag=GCA000153685_01872;product=Oxidoreductase;Parent=GCA000153685_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899017.1,SO:0001217,UniParc:UPI00000D4F59,UniRef:UniRef100_A5U3E3,UniRef:UniRef50_A0A1E3SPZ2,UniRef:UniRef90_A0A654ZZD4
contig_1	Pyrodigal	gene	2008529	2009347	.	+	.	ID=GCA000153685_01873_gene;locus_tag=GCA000153685_01873;gene=phiG
contig_1	Pyrodigal	CDS	2008529	2009347	.	+	0	ID=GCA000153685_01873;Name=DAPG hydrolase PhiG domain-containing protein;locus_tag=GCA000153685_01873;product=DAPG hydrolase PhiG domain-containing protein;gene=phiG;Parent=GCA000153685_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408760.1,SO:0001217,UniParc:UPI00000D112E,UniRef:UniRef100_O33178,UniRef:UniRef50_R4M6B1,UniRef:UniRef90_R4M6B1
contig_1	Pyrodigal	gene	2009352	2009912	.	-	.	ID=GCA000153685_01874_gene;locus_tag=GCA000153685_01874
contig_1	Pyrodigal	CDS	2009352	2009912	.	-	0	ID=GCA000153685_01874;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_01874;product=putative transcriptional regulatory protein;Parent=GCA000153685_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899018.1,SO:0001217,UniParc:UPI00000D5EBD,UniRef:UniRef100_O33179,UniRef:UniRef50_A0A3E2MNL5,UniRef:UniRef90_O33179
contig_1	Pyrodigal	gene	2010103	2011317	.	+	.	ID=GCA000153685_01875_gene;locus_tag=GCA000153685_01875;gene=cyp144
contig_1	Pyrodigal	CDS	2010103	2011317	.	+	0	ID=GCA000153685_01875;Name=cytochrome P450 Cyp144;locus_tag=GCA000153685_01875;product=cytochrome P450 Cyp144;Dbxref=GO:0004497,GO:0005506,GO:0009274,GO:0016705,GO:0020037;gene=cyp144;Parent=GCA000153685_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911660,KEGG:K21200,RefSeq:WP_003911660.1,SO:0001217,UniParc:UPI00005F6250,UniRef:UniRef100_P9WPL1,UniRef:UniRef50_P9WPL1,UniRef:UniRef90_P9WPL1;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2011438	2011887	.	-	.	ID=GCA000153685_01876_gene;locus_tag=GCA000153685_01876
contig_1	Pyrodigal	CDS	2011438	2011887	.	-	0	ID=GCA000153685_01876;Name=Secreted protein;locus_tag=GCA000153685_01876;product=Secreted protein;Parent=GCA000153685_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408775.1,SO:0001217,UniParc:UPI00001652A9,UniRef:UniRef100_O33181,UniRef:UniRef50_O33181,UniRef:UniRef90_O33181
contig_1	Pyrodigal	gene	2012043	2013836	.	-	.	ID=GCA000153685_01877_gene;locus_tag=GCA000153685_01877
contig_1	Pyrodigal	CDS	2012043	2013836	.	-	0	ID=GCA000153685_01877;Name=putative integral membrane protein;locus_tag=GCA000153685_01877;product=putative integral membrane protein;Parent=GCA000153685_01877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408781.1,SO:0001217,UniParc:UPI00000D4FDB,UniRef:UniRef100_O53930,UniRef:UniRef50_O53930,UniRef:UniRef90_O53930
contig_1	Pyrodigal	gene	2014056	2014619	.	+	.	ID=GCA000153685_01878_gene;locus_tag=GCA000153685_01878
contig_1	Pyrodigal	CDS	2014056	2014619	.	+	0	ID=GCA000153685_01878;Name=Conserved protein;locus_tag=GCA000153685_01878;product=Conserved protein;Parent=GCA000153685_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408792.1,SO:0001217,UniParc:UPI00000D0FAE,UniRef:UniRef100_O53931,UniRef:UniRef50_O53931,UniRef:UniRef90_O53931
contig_1	Pyrodigal	gene	2014659	2016842	.	-	.	ID=GCA000153685_01879_gene;locus_tag=GCA000153685_01879;gene=malQ
contig_1	Pyrodigal	CDS	2014659	2016842	.	-	0	ID=GCA000153685_01879;Name=4-alpha-glucanotransferase;locus_tag=GCA000153685_01879;product=4-alpha-glucanotransferase;Dbxref=GO:0004134,GO:0005829,GO:0005975,GO:0005980;gene=malQ;Parent=GCA000153685_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00705,SO:0001217,UniParc:UPI00005EE5C2,UniRef:UniRef100_P9WK23,UniRef:UniRef50_P9WK23,UniRef:UniRef90_P9WK23;ec_number=2.4.1.25
contig_1	Pyrodigal	gene	2017097	2018617	.	+	.	ID=GCA000153685_01880_gene;locus_tag=GCA000153685_01880;gene=eccB5
contig_1	Pyrodigal	CDS	2017097	2018617	.	+	0	ID=GCA000153685_01880;Name=type VII secretion system ESX-5 subunit EccB5;locus_tag=GCA000153685_01880;product=type VII secretion system ESX-5 subunit EccB5;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0009306,GO:0016787;gene=eccB5;Parent=GCA000153685_01880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899021,KEGG:K27085,RefSeq:WP_003899021.1,SO:0001217,UniParc:UPI00000D0F30,UniRef:UniRef100_P9WNQ9,UniRef:UniRef50_P9WNQ9,UniRef:UniRef90_P9WNQ9;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	2018614	2022789	.	+	.	ID=GCA000153685_01881_gene;locus_tag=GCA000153685_01881;gene=eccC5
contig_1	Pyrodigal	CDS	2018614	2022789	.	+	0	ID=GCA000153685_01881;Name=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;locus_tag=GCA000153685_01881;product=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009274,GO:0016887;gene=eccC5;Parent=GCA000153685_01881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408799,COG:COG6062,COG:U,RefSeq:WP_003408799.1,SO:0001217,UniParc:UPI00000D60BE,UniRef:UniRef100_P9WNA5,UniRef:UniRef50_P9WNA5,UniRef:UniRef90_P9WNA5
contig_1	Pyrodigal	gene	2022804	2023985	.	-	.	ID=GCA000153685_01882_gene;locus_tag=GCA000153685_01882;gene=cyp143
contig_1	Pyrodigal	CDS	2022804	2023985	.	-	0	ID=GCA000153685_01882;Name=cytochrome P450 Cyp143;locus_tag=GCA000153685_01882;product=cytochrome P450 Cyp143;Dbxref=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gene=cyp143;Parent=GCA000153685_01882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408802.1,SO:0001217,UniParc:UPI0000126BC0,UniRef:UniRef100_P9WPL3,UniRef:UniRef50_P9WPL3,UniRef:UniRef90_P9WPL3,VFDB:VFC0086,VFDB:VFG022280;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2024185	2024388	.	+	.	ID=GCA000153685_01883_gene;locus_tag=GCA000153685_01883;gene=fdxE
contig_1	Pyrodigal	CDS	2024185	2024388	.	+	0	ID=GCA000153685_01883;Name=ferredoxin;locus_tag=GCA000153685_01883;product=ferredoxin;Dbxref=GO:0046872,GO:0051538;gene=fdxE;Parent=GCA000153685_01883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003408803.1,SO:0001217,UniParc:UPI00000D5FC3,UniRef:UniRef100_O53937,UniRef:UniRef50_O53937,UniRef:UniRef90_O53937,VFDB:VFC0086,VFDB:VFG022293
contig_1	Pyrodigal	gene	2024640	2025755	.	+	.	ID=GCA000153685_01884_gene;locus_tag=GCA000153685_01884;gene=pPE25
contig_1	Pyrodigal	CDS	2024640	2025755	.	+	0	ID=GCA000153685_01884;Name=type VII secretion system ESX-5 target PPE25;locus_tag=GCA000153685_01884;product=type VII secretion system ESX-5 target PPE25;Dbxref=GO:0035435,GO:0052572;gene=pPE25;Parent=GCA000153685_01884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901254,SO:0001217,UniRef:UniRef50_P9WI13,UniRef:UniRef90_P9WI13
contig_1	Pyrodigal	gene	2025834	2026133	.	+	.	ID=GCA000153685_01885_gene;locus_tag=GCA000153685_01885
contig_1	Pyrodigal	CDS	2025834	2026133	.	+	0	ID=GCA000153685_01885;Name=type VII secretion system ESX-5 target PE18;locus_tag=GCA000153685_01885;product=type VII secretion system ESX-5 target PE18;Parent=GCA000153685_01885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408976,RefSeq:WP_003900408.1,SO:0001217,UniParc:UPI000127803C,UniRef:UniRef100_A0A0H3LA13,UniRef:UniRef50_A0A7Z7NA82,UniRef:UniRef90_L7N649
contig_1	Pyrodigal	gene	2026147	2027322	.	+	.	ID=GCA000153685_01886_gene;locus_tag=GCA000153685_01886;gene=pPE26
contig_1	Pyrodigal	CDS	2026147	2027322	.	+	0	ID=GCA000153685_01886;Name=type VII secretion system ESX-5 target PPE26;locus_tag=GCA000153685_01886;product=type VII secretion system ESX-5 target PPE26;Dbxref=GO:0052572;gene=pPE26;Parent=GCA000153685_01886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408979,RefSeq:WP_003900409.1,SO:0001217,UniParc:UPI000127803D,UniRef:UniRef100_UPI000127803D,UniRef:UniRef50_Q79FK6,UniRef:UniRef90_Q79FK6
contig_1	Pyrodigal	gene	2027737	2028828	.	+	.	ID=GCA000153685_01887_gene;locus_tag=GCA000153685_01887
contig_1	Pyrodigal	CDS	2027737	2028828	.	+	0	ID=GCA000153685_01887;Name=type VII secretion system ESX-5 target PPE27;locus_tag=GCA000153685_01887;product=type VII secretion system ESX-5 target PPE27;Parent=GCA000153685_01887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408805,SO:0001217,UniParc:UPI00000D4FDD,UniRef:UniRef100_Q79FK5,UniRef:UniRef50_H8IMY8,UniRef:UniRef90_Q79FK5
contig_1	Pyrodigal	gene	2029255	2029554	.	+	.	ID=GCA000153685_01888_gene;locus_tag=GCA000153685_01888
contig_1	Pyrodigal	CDS	2029255	2029554	.	+	0	ID=GCA000153685_01888;Name=type VII secretion system ESX-5 target PE19;locus_tag=GCA000153685_01888;product=type VII secretion system ESX-5 target PE19;Parent=GCA000153685_01888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408807,RefSeq:WP_003408807.1,SO:0001217,UniParc:UPI00001652AC,UniRef:UniRef100_Q79FK4,UniRef:UniRef50_A0A051U7L6,UniRef:UniRef90_A0A9P3Q234
contig_1	Pyrodigal	gene	2029698	2029874	.	+	.	ID=GCA000153685_01889_gene;locus_tag=GCA000153685_01889
contig_1	Pyrodigal	CDS	2029698	2029874	.	+	0	ID=GCA000153685_01889;Name=ESAT-6 like protein;locus_tag=GCA000153685_01889;product=ESAT-6 like protein;Parent=GCA000153685_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003CFFA5,UniRef:UniRef100_A0A0H3L9G4,UniRef:UniRef50_A0A9P2H9M1,UniRef:UniRef90_A0A0H3L9G4
contig_1	Pyrodigal	gene	2029875	2029994	.	+	.	ID=GCA000153685_01890_gene;locus_tag=GCA000153685_01890
contig_1	Pyrodigal	CDS	2029875	2029994	.	+	0	ID=GCA000153685_01890;Name=Esat-6 like protein;locus_tag=GCA000153685_01890;product=Esat-6 like protein;Parent=GCA000153685_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D837,UniRef:UniRef100_A0A0H3LA17,UniRef:UniRef50_A0A1X0DQX5,UniRef:UniRef90_A0A0H3LA17
contig_1	Pyrodigal	gene	2030045	2030329	.	+	.	ID=GCA000153685_01891_gene;locus_tag=GCA000153685_01891;gene=esxN
contig_1	Pyrodigal	CDS	2030045	2030329	.	+	0	ID=GCA000153685_01891;Name=effector;locus_tag=GCA000153685_01891;product=effector;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=esxN;Parent=GCA000153685_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408840,RefSeq:WP_003408840.1,SO:0001217,UniParc:UPI000012A197,UniRef:UniRef100_P9WNJ3,UniRef:UniRef50_P9WNI7,UniRef:UniRef90_P9WNI7
contig_1	Pyrodigal	gene	2030417	2031319	.	+	.	ID=GCA000153685_01892_gene;locus_tag=GCA000153685_01892;gene=espG5
contig_1	Pyrodigal	CDS	2030417	2031319	.	+	0	ID=GCA000153685_01892;Name=ESX-5 locus protein;locus_tag=GCA000153685_01892;product=ESX-5 locus protein;Dbxref=GO:0005737,GO:0005886,GO:0009274;gene=espG5;Parent=GCA000153685_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6054,COG:U,KEGG:K27091,RefSeq:WP_003408846.1,SO:0001217,UniParc:UPI00000D0FDE,UniRef:UniRef100_O53943,UniRef:UniRef50_O53943,UniRef:UniRef90_O53943,VFDB:VFC0086,VFDB:VFG002399
contig_1	Pyrodigal	gene	2031591	2033102	.	+	.	ID=GCA000153685_01893_gene;locus_tag=GCA000153685_01893;gene=eccD5
contig_1	Pyrodigal	CDS	2031591	2033102	.	+	0	ID=GCA000153685_01893;Name=type VII secretion system ESX-5 subunit EccD5;locus_tag=GCA000153685_01893;product=type VII secretion system ESX-5 subunit EccD5;Dbxref=GO:0005886,GO:0009306;gene=eccD5;Parent=GCA000153685_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900411,KEGG:K27087,RefSeq:WP_003900411.1,SO:0001217,UniParc:UPI00000D5F3C,UniRef:UniRef100_P9WNP9,UniRef:UniRef50_P9WNP9,UniRef:UniRef90_P9WNP9
contig_1	Pyrodigal	gene	2033080	2034837	.	+	.	ID=GCA000153685_01894_gene;locus_tag=GCA000153685_01894;gene=mycP5
contig_1	Pyrodigal	CDS	2033080	2034837	.	+	0	ID=GCA000153685_01894;Name=type VII secretion system ESX-5 serine protease mycosin MycP5;locus_tag=GCA000153685_01894;product=type VII secretion system ESX-5 serine protease mycosin MycP5;Dbxref=GO:0004252,GO:0005886,GO:0008236,GO:0009306,GO:0016485;gene=mycP5;Parent=GCA000153685_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408854,BlastRules:WP_003877892,BlastRules:WP_012394392,RefSeq:WP_003408854.1,SO:0001217,UniParc:UPI00000D5F48,UniRef:UniRef100_O53945,UniRef:UniRef50_O53945,UniRef:UniRef90_O53945;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	2034834	2036054	.	+	.	ID=GCA000153685_01895_gene;locus_tag=GCA000153685_01895;gene=eccE5
contig_1	Pyrodigal	CDS	2034834	2036054	.	+	0	ID=GCA000153685_01895;Name=type VII secretion system ESX-5 subunit EccE5;locus_tag=GCA000153685_01895;product=type VII secretion system ESX-5 subunit EccE5;Dbxref=GO:0005829,GO:0005886;gene=eccE5;Parent=GCA000153685_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408859,KEGG:K27088,RefSeq:WP_003408859.1,SO:0001217,UniParc:UPI00000D10E4,UniRef:UniRef100_P9WJE3,UniRef:UniRef50_B2HSU8,UniRef:UniRef90_P9WJE3
contig_1	Pyrodigal	gene	2036051	2037883	.	+	.	ID=GCA000153685_01896_gene;locus_tag=GCA000153685_01896;gene=eccA5
contig_1	Pyrodigal	CDS	2036051	2037883	.	+	0	ID=GCA000153685_01896;Name=type VII secretion system ESX-5 AAA family ATPase EccA5;locus_tag=GCA000153685_01896;product=type VII secretion system ESX-5 AAA family ATPase EccA5;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0009306,GO:0016887;gene=eccA5;Parent=GCA000153685_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003408868,BlastRules:WP_003877894,BlastRules:WP_012394394,COG:COG0464,COG:MDT,RefSeq:WP_003408868.1,SO:0001217,UniParc:UPI000013B198,UniRef:UniRef100_P9WPI1,UniRef:UniRef50_P9WPI1,UniRef:UniRef90_P9WPI1
contig_1	Pyrodigal	gene	2038510	2038701	.	+	.	ID=GCA000153685_01897_gene;locus_tag=GCA000153685_01897;gene=lppT
contig_1	Pyrodigal	CDS	2038510	2038701	.	+	0	ID=GCA000153685_01897;Name=Lipoprotein LppT;locus_tag=GCA000153685_01897;product=Lipoprotein LppT;gene=lppT;Parent=GCA000153685_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899024.1,SO:0001217,UniParc:UPI00000D5F6D,UniRef:UniRef100_A5U3G6,UniRef:UniRef50_A0A1X2B5G7,UniRef:UniRef90_A5U3G6
contig_1	Pyrodigal	gene	2038804	2040771	.	+	.	ID=GCA000153685_01898_gene;locus_tag=GCA000153685_01898;gene=pPE28
contig_1	Pyrodigal	CDS	2038804	2040771	.	+	0	ID=GCA000153685_01898;Name=putative PPE family protein PPE28;locus_tag=GCA000153685_01898;product=putative PPE family protein PPE28;Dbxref=GO:0052572;gene=pPE28;Parent=GCA000153685_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899025.1,SO:0001217,UniParc:UPI000016507E,UniRef:UniRef100_P9WI10,UniRef:UniRef50_P9WI11,UniRef:UniRef90_P9WI11
contig_1	Pyrodigal	gene	2041636	2041851	.	-	.	ID=GCA000153685_01899_gene;locus_tag=GCA000153685_01899
contig_1	Pyrodigal	CDS	2041636	2041851	.	-	0	ID=GCA000153685_01899;Name=hypothetical protein;locus_tag=GCA000153685_01899;product=hypothetical protein;Parent=GCA000153685_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002D28E53,UniRef:UniRef100_A0A0T9ZKF4,UniRef:UniRef50_A0A0T9ZKF4,UniRef:UniRef90_A0A0T9ZKF4
contig_1	Pyrodigal	gene	2041875	2042624	.	+	.	ID=GCA000153685_01900_gene;locus_tag=GCA000153685_01900;gene=pPE29;pseudogene=unitary
contig_1	Pyrodigal	CDS	2041875	2042624	.	+	0	ID=GCA000153685_01900;Name=putative PPE family protein PPE29;locus_tag=GCA000153685_01900;product=putative PPE family protein PPE29;Dbxref=GO:0009274,GO:0052572;pseudogene=unitary;gene=pPE29;Parent=GCA000153685_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P9WI09,UniRef:UniRef90_P9WI09
contig_1	Pyrodigal	gene	2042736	2044127	.	+	.	ID=GCA000153685_01901_gene;locus_tag=GCA000153685_01901;gene=pPE30
contig_1	Pyrodigal	CDS	2042736	2044127	.	+	0	ID=GCA000153685_01901;Name=putative PPE family protein PPE30;locus_tag=GCA000153685_01901;product=putative PPE family protein PPE30;Dbxref=GO:0052572;gene=pPE30;Parent=GCA000153685_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409061.1,SO:0001217,UniParc:UPI000013B304,UniRef:UniRef100_P9WI07,UniRef:UniRef50_P9WI07,UniRef:UniRef90_P9WI07
contig_1	Pyrodigal	gene	2044275	2046227	.	-	.	ID=GCA000153685_01902_gene;locus_tag=GCA000153685_01902
contig_1	Pyrodigal	CDS	2044275	2046227	.	-	0	ID=GCA000153685_01902;Name=PE domain-containing protein;locus_tag=GCA000153685_01902;product=PE domain-containing protein;Parent=GCA000153685_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5C9,UniRef:UniRef100_A5U3H0,UniRef:UniRef50_A0A829CC64,UniRef:UniRef90_A0A829CC64
contig_1	Pyrodigal	gene	2046375	2046701	.	-	.	ID=GCA000153685_01903_gene;locus_tag=GCA000153685_01903
contig_1	Pyrodigal	CDS	2046375	2046701	.	-	0	ID=GCA000153685_01903;Name=Conserved protein;locus_tag=GCA000153685_01903;product=Conserved protein;Parent=GCA000153685_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409065.1,SO:0001217,UniParc:UPI00001652AD,UniRef:UniRef100_O53953,UniRef:UniRef50_O53953,UniRef:UniRef90_O53953
contig_1	Infernal	regulatory_region	2046947	2047121	5.4e-23	+	.	ID=FNJOPAJJMO_74;Name=M-box riboswitch aptamer (ykoK leader);product=M-box riboswitch aptamer (ykoK leader);Dbxref=RFAM:RF00380;inference=profile:Rfam:RF00380;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2047424	2047723	.	+	.	ID=GCA000153685_01904_gene;locus_tag=GCA000153685_01904
contig_1	Pyrodigal	CDS	2047424	2047723	.	+	0	ID=GCA000153685_01904;Name=PE family protein PE20;locus_tag=GCA000153685_01904;product=PE family protein PE20;Parent=GCA000153685_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900412.1,SO:0001217,UniParc:UPI00000D5F88,UniRef:UniRef100_L7N656,UniRef:UniRef50_A0A7I7Q5M1,UniRef:UniRef90_L7N656
contig_1	Pyrodigal	gene	2047738	2048949	.	+	.	ID=GCA000153685_01905_gene;locus_tag=GCA000153685_01905
contig_1	Pyrodigal	CDS	2047738	2048949	.	+	0	ID=GCA000153685_01905;Name=PPE family protein;locus_tag=GCA000153685_01905;product=PPE family protein;Parent=GCA000153685_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409179.1,SO:0001217,UniParc:UPI0000165080,UniRef:UniRef100_A0A1R3XZE3,UniRef:UniRef50_A0A1A2EJ82,UniRef:UniRef90_A0A0H3M6X8
contig_1	Pyrodigal	gene	2049270	2050502	.	+	.	ID=GCA000153685_01906_gene;locus_tag=GCA000153685_01906;gene=pPE32
contig_1	Pyrodigal	CDS	2049270	2050502	.	+	0	ID=GCA000153685_01906;Name=putative PPE family protein PPE32;locus_tag=GCA000153685_01906;product=putative PPE family protein PPE32;Dbxref=GO:0010961,GO:0052572,GO:1903830;gene=pPE32;Parent=GCA000153685_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF4849,UniRef:UniRef100_P9WI05,UniRef:UniRef50_P9WI05,UniRef:UniRef90_P9WI05
contig_1	Pyrodigal	gene	2050565	2052040	.	+	.	ID=GCA000153685_01907_gene;locus_tag=GCA000153685_01907;gene=pPE33
contig_1	Pyrodigal	CDS	2050565	2052040	.	+	0	ID=GCA000153685_01907;Name=putative PPE family protein PPE33;locus_tag=GCA000153685_01907;product=putative PPE family protein PPE33;Dbxref=GO:0010961,GO:0052572,GO:1903830;gene=pPE33;Parent=GCA000153685_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004B4CE00,UniRef:UniRef100_P9WI02,UniRef:UniRef50_P9WI03,UniRef:UniRef90_P9WI03
contig_1	Pyrodigal	gene	2052321	2052641	.	+	.	ID=GCA000153685_01908_gene;locus_tag=GCA000153685_01908
contig_1	Pyrodigal	CDS	2052321	2052641	.	+	0	ID=GCA000153685_01908;Name=Conserved protein;locus_tag=GCA000153685_01908;product=Conserved protein;Parent=GCA000153685_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015288168.1,SO:0001217,UniParc:UPI0001BC75E5,UniRef:UniRef100_O07222,UniRef:UniRef50_A0A1A3BV98,UniRef:UniRef90_O07222
contig_1	Pyrodigal	gene	2052795	2053499	.	+	.	ID=GCA000153685_01909_gene;locus_tag=GCA000153685_01909;gene=mgtC
contig_1	Pyrodigal	CDS	2052795	2053499	.	+	0	ID=GCA000153685_01909;Name=putative Mg2+ transport P-type ATPase C MgtC;locus_tag=GCA000153685_01909;product=putative Mg2+ transport P-type ATPase C MgtC;gene=mgtC;Parent=GCA000153685_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07507,RefSeq:WP_003900414.1,SO:0001217,UniParc:UPI0001278072,UniRef:UniRef100_A0A0H3L9I3,UniRef:UniRef50_A0A7I7MQ86,UniRef:UniRef90_A0A1X2LSG0,VFDB:VFC0272,VFDB:VFG001395
contig_1	Pyrodigal	gene	2053509	2054702	.	-	.	ID=GCA000153685_01910_gene;locus_tag=GCA000153685_01910
contig_1	Pyrodigal	CDS	2053509	2054702	.	-	0	ID=GCA000153685_01910;Name=NADH dehydrogenase-like protein Rv1812c;locus_tag=GCA000153685_01910;product=NADH dehydrogenase-like protein Rv1812c;Dbxref=GO:0005576,GO:0005886,GO:0016491;Parent=GCA000153685_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2C60,UniRef:UniRef100_A0A0E8V406,UniRef:UniRef50_P9WJJ1,UniRef:UniRef90_P9WJJ1;ec_number=1.6.-.-
contig_1	Pyrodigal	gene	2055033	2055464	.	-	.	ID=GCA000153685_01911_gene;locus_tag=GCA000153685_01911
contig_1	Pyrodigal	CDS	2055033	2055464	.	-	0	ID=GCA000153685_01911;Name=putative protein Mb1843c;locus_tag=GCA000153685_01911;product=putative protein Mb1843c;Dbxref=GO:0005886;Parent=GCA000153685_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409199.1,SO:0001217,UniParc:UPI000013B30B,UniRef:UniRef100_P9WLS1,UniRef:UniRef50_P9WLS1,UniRef:UniRef90_P9WLS1
contig_1	Pyrodigal	gene	2055831	2056775	.	+	.	ID=GCA000153685_01912_gene;locus_tag=GCA000153685_01912;gene=erg3
contig_1	Pyrodigal	CDS	2055831	2056775	.	+	0	ID=GCA000153685_01912;Name=C-5 sterol desaturase;locus_tag=GCA000153685_01912;product=C-5 sterol desaturase;Dbxref=GO:0005506,GO:0005886,GO:0016126,GO:0016491;gene=erg3;Parent=GCA000153685_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899033.1,SO:0001217,UniParc:UPI0000165082,UniRef:UniRef100_P9WNZ9,UniRef:UniRef50_P9WNZ9,UniRef:UniRef90_P9WNZ9;ec_number=1.3.-.-
contig_1	Pyrodigal	gene	2056880	2057545	.	+	.	ID=GCA000153685_01913_gene;locus_tag=GCA000153685_01913
contig_1	Pyrodigal	CDS	2056880	2057545	.	+	0	ID=GCA000153685_01913;Name=putative protein Mb1845;locus_tag=GCA000153685_01913;product=putative protein Mb1845;Dbxref=GO:0005576,GO:0009274;Parent=GCA000153685_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409204.1,SO:0001217,UniParc:UPI0000165083,UniRef:UniRef100_P9WLR8,UniRef:UniRef50_P9WLR9,UniRef:UniRef90_P9WLR9
contig_1	Pyrodigal	gene	2057626	2058312	.	+	.	ID=GCA000153685_01914_gene;locus_tag=GCA000153685_01914
contig_1	Pyrodigal	CDS	2057626	2058312	.	+	0	ID=GCA000153685_01914;Name=HTH-type transcriptional regulator Mb1846;locus_tag=GCA000153685_01914;product=HTH-type transcriptional regulator Mb1846;Dbxref=GO:0000976,GO:0003700,GO:0005737;Parent=GCA000153685_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899034.1,SO:0001217,UniParc:UPI00005EE5CF,UniRef:UniRef100_A0A0H3L9I7,UniRef:UniRef50_P9WMC9,UniRef:UniRef90_P9WMC9
contig_1	Pyrodigal	gene	2058947	2060410	.	+	.	ID=GCA000153685_01915_gene;locus_tag=GCA000153685_01915
contig_1	Pyrodigal	CDS	2058947	2060410	.	+	0	ID=GCA000153685_01915;Name=FAD-binding protein;locus_tag=GCA000153685_01915;product=FAD-binding protein;Parent=GCA000153685_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409207.1,SO:0001217,UniParc:UPI00000CA91E,UniRef:UniRef100_Q50616,UniRef:UniRef50_A0A1A9GI33,UniRef:UniRef90_Q50616
contig_1	Pyrodigal	gene	2060530	2062035	.	-	.	ID=GCA000153685_01916_gene;locus_tag=GCA000153685_01916
contig_1	Pyrodigal	CDS	2060530	2062035	.	-	0	ID=GCA000153685_01916;Name=PE family protein;locus_tag=GCA000153685_01916;product=PE family protein;Parent=GCA000153685_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000042B46C,UniRef:UniRef100_Q66RZ1,UniRef:UniRef90_P9WIF5
contig_1	Pyrodigal	gene	2062170	2064089	.	-	.	ID=GCA000153685_01917_gene;locus_tag=GCA000153685_01917;gene=bacA
contig_1	Pyrodigal	CDS	2062170	2064089	.	-	0	ID=GCA000153685_01917;Name=vitamin B12 ABC transporter ATP-binding protein BacA;locus_tag=GCA000153685_01917;product=vitamin B12 ABC transporter ATP-binding protein BacA;Dbxref=GO:0005524,GO:0005576,GO:0005886,GO:0016887,GO:0052572,GO:0140359;gene=bacA;Parent=GCA000153685_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900416,RefSeq:WP_003900416.1,SO:0001217,UniParc:UPI000013B30F,UniRef:UniRef100_P9WQI9,UniRef:UniRef50_P9WQI9,UniRef:UniRef90_P9WQI9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2064160	2065803	.	+	.	ID=GCA000153685_01918_gene;locus_tag=GCA000153685_01918;gene=ilvG
contig_1	Pyrodigal	CDS	2064160	2065803	.	+	0	ID=GCA000153685_01918;Name=acetolactate synthase;locus_tag=GCA000153685_01918;product=acetolactate synthase;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvG;Parent=GCA000153685_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409218.1,SO:0001217,UniParc:UPI000012D5A9,UniRef:UniRef100_P9WG39,UniRef:UniRef50_P9WG39,UniRef:UniRef90_P9WG39;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2065908	2068244	.	+	.	ID=GCA000153685_01919_gene;locus_tag=GCA000153685_01919;gene=secA2
contig_1	Pyrodigal	CDS	2065908	2068244	.	+	0	ID=GCA000153685_01919;Name=accessory Sec system translocase SecA2;locus_tag=GCA000153685_01919;product=accessory Sec system translocase SecA2;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0006886,GO:0008320,GO:0008564,GO:0009274,GO:0016020,GO:0016887,GO:0017038,GO:0031522,GO:0043952,GO:0051701,GO:0052170,GO:0052553,GO:0065002;gene=secA2;Parent=GCA000153685_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,RefSeq:WP_015456315.1,SO:0001217,UniParc:UPI000169A2CF,UniRef:UniRef100_A0A0H3L9J2,UniRef:UniRef50_P9WGP3,UniRef:UniRef90_P9WGP3;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	2068441	2069070	.	+	.	ID=GCA000153685_01920_gene;locus_tag=GCA000153685_01920;gene=pgsA2
contig_1	Pyrodigal	CDS	2068441	2069070	.	+	0	ID=GCA000153685_01920;Name=Putative cardiolipin synthase;locus_tag=GCA000153685_01920;product=Putative cardiolipin synthase;Dbxref=GO:0005886,GO:0008444,GO:0008654,GO:0043337,GO:0046474;gene=pgsA2;Parent=GCA000153685_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08744,RefSeq:WP_003409227.1,SO:0001217,UniParc:UPI0000131887,UniRef:UniRef100_P9WPG5,UniRef:UniRef50_P9WPG5,UniRef:UniRef90_P9WPG5;ec_number=2.7.8.41
contig_1	Pyrodigal	gene	2069057	2069986	.	+	.	ID=GCA000153685_01921_gene;locus_tag=GCA000153685_01921
contig_1	Pyrodigal	CDS	2069057	2069986	.	+	0	ID=GCA000153685_01921;Name=UPF0749 protein Rv1823;locus_tag=GCA000153685_01921;product=UPF0749 protein Rv1823;Dbxref=GO:0005886;Parent=GCA000153685_01921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165085,UniRef:UniRef100_A0A0E7ZD86,UniRef:UniRef50_P9WFG1,UniRef:UniRef90_P9WFG1
contig_1	Pyrodigal	gene	2070048	2070380	.	+	.	ID=GCA000153685_01922_gene;locus_tag=GCA000153685_01922
contig_1	Pyrodigal	CDS	2070048	2070380	.	+	0	ID=GCA000153685_01922;Name=putative protein Rv1824;locus_tag=GCA000153685_01922;product=putative protein Rv1824;Dbxref=GO:0005886;Parent=GCA000153685_01922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409231.1,SO:0001217,UniParc:UPI00005EE5D2,UniRef:UniRef100_P9WLR7,UniRef:UniRef50_P9WLR7,UniRef:UniRef90_P9WLR7
contig_1	Pyrodigal	gene	2070397	2071275	.	+	.	ID=GCA000153685_01923_gene;locus_tag=GCA000153685_01923
contig_1	Pyrodigal	CDS	2070397	2071275	.	+	0	ID=GCA000153685_01923;Name=UPF0749 protein Rv1825;locus_tag=GCA000153685_01923;product=UPF0749 protein Rv1825;Dbxref=GO:0005886;Parent=GCA000153685_01923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899038.1,SO:0001217,UniParc:UPI000013B318,UniRef:UniRef100_P9WFG3,UniRef:UniRef50_P9WFG3,UniRef:UniRef90_P9WFG3
contig_1	Pyrodigal	gene	2071313	2071717	.	+	.	ID=GCA000153685_01924_gene;locus_tag=GCA000153685_01924;gene=gcvH
contig_1	Pyrodigal	CDS	2071313	2071717	.	+	0	ID=GCA000153685_01924;Name=glycine cleavage system protein GcvH;locus_tag=GCA000153685_01924;product=glycine cleavage system protein GcvH;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000153685_01924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899040.1,SO:0001217,UniParc:UPI000012B32F,UniRef:UniRef100_P9WN55,UniRef:UniRef50_P9WN55,UniRef:UniRef90_P9WN55
contig_1	Pyrodigal	gene	2071957	2072445	.	+	.	ID=GCA000153685_01925_gene;locus_tag=GCA000153685_01925;gene=garA
contig_1	Pyrodigal	CDS	2071957	2072445	.	+	0	ID=GCA000153685_01925;Name=glycogen accumulation regulator GarA;locus_tag=GCA000153685_01925;product=glycogen accumulation regulator GarA;Dbxref=GO:0003729,GO:0005576,GO:0005886,GO:0009274,GO:0042802,GO:0043457,GO:0045820,GO:0140678;gene=garA;Parent=GCA000153685_01925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899041,RefSeq:WP_003899041.1,SO:0001217,UniParc:UPI000013B319,UniRef:UniRef100_P9WJA9,UniRef:UniRef50_P9WJA9,UniRef:UniRef90_P9WJA9
contig_1	Pyrodigal	gene	2072442	2073185	.	+	.	ID=GCA000153685_01926_gene;locus_tag=GCA000153685_01926
contig_1	Pyrodigal	CDS	2072442	2073185	.	+	0	ID=GCA000153685_01926;Name=putative HTH-type transcriptional regulator Rv1828;locus_tag=GCA000153685_01926;product=putative HTH-type transcriptional regulator Rv1828;Dbxref=GO:0003677,GO:0003700,GO:0005829;Parent=GCA000153685_01926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409239.1,SO:0001217,UniParc:UPI000013B31A,UniRef:UniRef100_P9WME7,UniRef:UniRef50_P9WME7,UniRef:UniRef90_P9WME7
contig_1	Pyrodigal	gene	2073304	2073798	.	+	.	ID=GCA000153685_01927_gene;locus_tag=GCA000153685_01927
contig_1	Pyrodigal	CDS	2073304	2073798	.	+	0	ID=GCA000153685_01927;Name=putative protein Rv1829;locus_tag=GCA000153685_01927;product=putative protein Rv1829;Dbxref=GO:0004518,GO:0005886,GO:0009274;Parent=GCA000153685_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1259,COG:R,KEGG:K08999,RefSeq:WP_003409242.1,SO:0001217,UniParc:UPI000013B31B,UniRef:UniRef100_P9WLR5,UniRef:UniRef50_P9WLR5,UniRef:UniRef90_P9WLR5
contig_1	Pyrodigal	gene	2074135	2074767	.	+	.	ID=GCA000153685_01928_gene;locus_tag=GCA000153685_01928
contig_1	Pyrodigal	CDS	2074135	2074767	.	+	0	ID=GCA000153685_01928;Name=putative HTH-type transcriptional regulator Mb1861;locus_tag=GCA000153685_01928;product=putative HTH-type transcriptional regulator Mb1861;Dbxref=GO:0003677,GO:0003700;Parent=GCA000153685_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911669.1,SO:0001217,UniParc:UPI00005EE5D5,UniRef:UniRef100_A0A0H3LGK3,UniRef:UniRef50_P9WME5,UniRef:UniRef90_P9WME5
contig_1	Pyrodigal	gene	2074820	2075077	.	+	.	ID=GCA000153685_01929_gene;locus_tag=GCA000153685_01929
contig_1	Pyrodigal	CDS	2074820	2075077	.	+	0	ID=GCA000153685_01929;Name=putative protein Mb1862;locus_tag=GCA000153685_01929;product=putative protein Mb1862;Parent=GCA000153685_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902191.1,SO:0001217,UniParc:UPI000013B320,UniRef:UniRef100_P9WLR3,UniRef:UniRef50_P9WLR3,UniRef:UniRef90_P9WLR3
contig_1	Infernal	regulatory_region	2074862	2074959	5.6e-10	+	.	ID=FNJOPAJJMO_80;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Infernal	regulatory_region	2074963	2075093	1.5e-06	+	.	ID=FNJOPAJJMO_86;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	2075126	2077951	.	+	.	ID=GCA000153685_01930_gene;locus_tag=GCA000153685_01930;gene=gcvP
contig_1	Pyrodigal	CDS	2075126	2077951	.	+	0	ID=GCA000153685_01930;Name=aminomethyl-transferring glycine dehydrogenase;locus_tag=GCA000153685_01930;product=aminomethyl-transferring glycine dehydrogenase;Dbxref=GO:0004375,GO:0005829,GO:0005886,GO:0005960,GO:0009274,GO:0016594,GO:0019464,GO:0030170;gene=gcvP;Parent=GCA000153685_01930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00281,RefSeq:WP_003900418.1,SO:0001217,UniParc:UPI000012B34E,UniRef:UniRef100_A5U3J9,UniRef:UniRef50_Q7VET8,UniRef:UniRef90_Q7VET8;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	2078178	2079038	.	-	.	ID=GCA000153685_01931_gene;locus_tag=GCA000153685_01931;gene=dhmA2
contig_1	Pyrodigal	CDS	2078178	2079038	.	-	0	ID=GCA000153685_01931;Name=haloalkane dehalogenase;locus_tag=GCA000153685_01931;product=haloalkane dehalogenase;Dbxref=GO:0005576,GO:0005886,GO:0016020,GO:0018786;gene=dhmA2;Parent=GCA000153685_01931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409254.1,SO:0001217,UniParc:UPI000012925C,UniRef:UniRef100_P9WMS1,UniRef:UniRef50_P9WMS1,UniRef:UniRef90_P9WMS1;ec_number=3.8.1.5
contig_1	Pyrodigal	gene	2079181	2079945	.	+	.	ID=GCA000153685_01932_gene;locus_tag=GCA000153685_01932;gene=lipZ
contig_1	Pyrodigal	CDS	2079181	2079945	.	+	0	ID=GCA000153685_01932;Name=Putative hydrolase LipZ;locus_tag=GCA000153685_01932;product=Putative hydrolase LipZ;Dbxref=GO:0016787;gene=lipZ;Parent=GCA000153685_01932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5D6,UniRef:UniRef100_P9WLR1,UniRef:UniRef50_P9WLR1,UniRef:UniRef90_P9WLR1;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2079950	2081758	.	-	.	ID=GCA000153685_01933_gene;locus_tag=GCA000153685_01933
contig_1	Pyrodigal	CDS	2079950	2081758	.	-	0	ID=GCA000153685_01933;Name=Putative serine esterase Mb1866c;locus_tag=GCA000153685_01933;product=Putative serine esterase Mb1866c;Dbxref=GO:0008239,GO:0052689;Parent=GCA000153685_01933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06978,SO:0001217,UniParc:UPI00005EE5D7,UniRef:UniRef100_P9WIQ9,UniRef:UniRef50_P9WIQ9,UniRef:UniRef90_P9WIQ9;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2081852	2083885	.	-	.	ID=GCA000153685_01934_gene;locus_tag=GCA000153685_01934
contig_1	Pyrodigal	CDS	2081852	2083885	.	-	0	ID=GCA000153685_01934;Name=putative protein Rv1836c;locus_tag=GCA000153685_01934;product=putative protein Rv1836c;Dbxref=GO:0005576,GO:0005886,GO:0009274;Parent=GCA000153685_01934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901265.1,SO:0001217,UniParc:UPI000013B324,UniRef:UniRef100_P9WLQ9,UniRef:UniRef50_P9WLQ9,UniRef:UniRef90_P9WLQ9
contig_1	Pyrodigal	gene	2084005	2086230	.	-	.	ID=GCA000153685_01935_gene;locus_tag=GCA000153685_01935;gene=glcB
contig_1	Pyrodigal	CDS	2084005	2086230	.	-	0	ID=GCA000153685_01935;Name=malate synthase G;locus_tag=GCA000153685_01935;product=malate synthase G;Dbxref=GO:0000287,GO:0001968,GO:0004474,GO:0005576,GO:0005737,GO:0005829,GO:0005886,GO:0006097,GO:0006099,GO:0009274,GO:0009436,GO:0009986,GO:0015936,GO:0042603,GO:0042803,GO:0043236,GO:0044406,GO:0046810,GO:0120225;gene=glcB;Parent=GCA000153685_01935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01638,RefSeq:WP_003409271.1,SO:0001217,UniParc:UPI000011341C,UniRef:UniRef100_P9WK17,UniRef:UniRef50_P9WK17,UniRef:UniRef90_P9WK17;ec_number=2.3.3.9
contig_1	Pyrodigal	gene	2086506	2086901	.	-	.	ID=GCA000153685_01936_gene;locus_tag=GCA000153685_01936;gene=vapC13
contig_1	Pyrodigal	CDS	2086506	2086901	.	-	0	ID=GCA000153685_01936;Name=VapC ribonuclease Mb1869c;locus_tag=GCA000153685_01936;product=VapC ribonuclease Mb1869c;Dbxref=GO:0000287,GO:0004540;gene=vapC13;Parent=GCA000153685_01936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409273.1,SO:0001217,UniParc:UPI000013B325,UniRef:UniRef100_P9WFA1,UniRef:UniRef50_P9WFA1,UniRef:UniRef90_P9WFA1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2086898	2087161	.	-	.	ID=GCA000153685_01937_gene;locus_tag=GCA000153685_01937;gene=vapB13
contig_1	Pyrodigal	CDS	2086898	2087161	.	-	0	ID=GCA000153685_01937;Name=Putative antitoxin VapB13;locus_tag=GCA000153685_01937;product=Putative antitoxin VapB13;gene=vapB13;Parent=GCA000153685_01937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409276.1,SO:0001217,UniParc:UPI00000D5E2F,UniRef:UniRef100_P9WJ51,UniRef:UniRef50_P9WJ51,UniRef:UniRef90_P9WJ51
contig_1	Pyrodigal	gene	2087220	2088767	.	-	.	ID=GCA000153685_01938_gene;locus_tag=GCA000153685_01938;gene=pE_PGRS34
contig_1	Pyrodigal	CDS	2087220	2088767	.	-	0	ID=GCA000153685_01938;Name=putative PE-PGRS family protein PE_PGRS34;locus_tag=GCA000153685_01938;product=putative PE-PGRS family protein PE_PGRS34;Dbxref=GO:0005886;gene=pE_PGRS34;Parent=GCA000153685_01938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904712.1,SO:0001217,UniParc:UPI000013B327,UniRef:UniRef100_P9WIF3,UniRef:UniRef50_P9WIF3,UniRef:UniRef90_P9WIF3
contig_1	Pyrodigal	gene	2088930	2089967	.	-	.	ID=GCA000153685_01939_gene;locus_tag=GCA000153685_01939
contig_1	Pyrodigal	CDS	2088930	2089967	.	-	0	ID=GCA000153685_01939;Name=putative protein Rv1841c;locus_tag=GCA000153685_01939;product=putative protein Rv1841c;Dbxref=GO:0005886;Parent=GCA000153685_01939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900419.1,SO:0001217,UniParc:UPI000013B329,UniRef:UniRef100_P9WLQ7,UniRef:UniRef50_P9WLQ7,UniRef:UniRef90_P9WLQ7
contig_1	Pyrodigal	gene	2089967	2091334	.	-	.	ID=GCA000153685_01940_gene;locus_tag=GCA000153685_01940
contig_1	Pyrodigal	CDS	2089967	2091334	.	-	0	ID=GCA000153685_01940;Name=UPF0053 protein Rv1842c;locus_tag=GCA000153685_01940;product=UPF0053 protein Rv1842c;Dbxref=GO:0005886,GO:0050660;Parent=GCA000153685_01940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03699,RefSeq:WP_003899046.1,SO:0001217,UniParc:UPI000013B32B,UniRef:UniRef100_P9WFP3,UniRef:UniRef50_P9WFP3,UniRef:UniRef90_P9WFP3
contig_1	Pyrodigal	gene	2091508	2092944	.	-	.	ID=GCA000153685_01941_gene;locus_tag=GCA000153685_01941;gene=guaB1
contig_1	Pyrodigal	CDS	2091508	2092944	.	-	0	ID=GCA000153685_01941;Name=GuaB1 family IMP dehydrogenase-related protein;locus_tag=GCA000153685_01941;product=GuaB1 family IMP dehydrogenase-related protein;Dbxref=GO:0003920,GO:0003938,GO:0005829,GO:0005886,GO:0006166,GO:0032264;gene=guaB1;Parent=GCA000153685_01941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26110,SO:0001217,UniParc:UPI00005EE5D9,UniRef:UniRef100_P9WKI3,UniRef:UniRef50_A0QYE8,UniRef:UniRef90_P9WKI3;ec_number=1.7.1.7
contig_1	Pyrodigal	gene	2092980	2094431	.	-	.	ID=GCA000153685_01942_gene;locus_tag=GCA000153685_01942;gene=gndA
contig_1	Pyrodigal	CDS	2092980	2094431	.	-	0	ID=GCA000153685_01942;Name=NADP-dependent phosphogluconate dehydrogenase;locus_tag=GCA000153685_01942;product=NADP-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0006098,GO:0050661;gene=gndA;Parent=GCA000153685_01942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00033,RefSeq:WP_003409284.1,SO:0001217,UniParc:UPI00000D2C62,UniRef:UniRef100_A0A0H3LDZ2,UniRef:UniRef50_A0A7I7XHS4,UniRef:UniRef90_A0A0H3LDZ2;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	2094461	2095411	.	-	.	ID=GCA000153685_01943_gene;locus_tag=GCA000153685_01943
contig_1	Pyrodigal	CDS	2094461	2095411	.	-	0	ID=GCA000153685_01943;Name=Peptidase M48 domain-containing protein;locus_tag=GCA000153685_01943;product=Peptidase M48 domain-containing protein;Parent=GCA000153685_01943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409298.1,SO:0001217,UniParc:UPI00000D119E,UniRef:UniRef100_P95164,UniRef:UniRef50_R4LYD1,UniRef:UniRef90_R4LYD1
contig_1	Pyrodigal	gene	2095426	2095842	.	-	.	ID=GCA000153685_01944_gene;locus_tag=GCA000153685_01944;gene=blaI
contig_1	Pyrodigal	CDS	2095426	2095842	.	-	0	ID=GCA000153685_01944;Name=transcriptional repressor BlaI;locus_tag=GCA000153685_01944;product=transcriptional repressor BlaI;Dbxref=GO:0003677,GO:0005737,GO:0006355,GO:0045892,GO:0046677;gene=blaI;Parent=GCA000153685_01944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409301,KEGG:K02171,RefSeq:WP_003409301.1,SO:0001217,UniParc:UPI00000D109B,UniRef:UniRef100_P9WMJ5,UniRef:UniRef50_P9WMJ5,UniRef:UniRef90_P9WMJ5
contig_1	Pyrodigal	gene	2096120	2096542	.	+	.	ID=GCA000153685_01945_gene;locus_tag=GCA000153685_01945
contig_1	Pyrodigal	CDS	2096120	2096542	.	+	0	ID=GCA000153685_01945;Name=Putative esterase Rv1847;locus_tag=GCA000153685_01945;product=Putative esterase Rv1847;Dbxref=GO:0005829,GO:0061522;Parent=GCA000153685_01945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899048.1,SO:0001217,UniParc:UPI000013B330,UniRef:UniRef100_P9WIM3,UniRef:UniRef50_P9WIM3,UniRef:UniRef90_P9WIM3;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	2096591	2096893	.	+	.	ID=GCA000153685_01946_gene;locus_tag=GCA000153685_01946;gene=ureA
contig_1	Pyrodigal	CDS	2096591	2096893	.	+	0	ID=GCA000153685_01946;Name=urease subunit gamma;locus_tag=GCA000153685_01946;product=urease subunit gamma;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0043419;gene=ureA;Parent=GCA000153685_01946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409305.1,SO:0001217,UniParc:UPI0000137D9C,UniRef:UniRef100_P9WFE7,UniRef:UniRef50_P9WFE7,UniRef:UniRef90_P9WFE7;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2096890	2097204	.	+	.	ID=GCA000153685_01947_gene;locus_tag=GCA000153685_01947;gene=ureB
contig_1	Pyrodigal	CDS	2096890	2097204	.	+	0	ID=GCA000153685_01947;Name=urease subunit beta;locus_tag=GCA000153685_01947;product=urease subunit beta;Dbxref=GO:0009039,GO:0035550,GO:0043419;gene=ureB;Parent=GCA000153685_01947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409308.1,SO:0001217,UniParc:UPI0000137D88,UniRef:UniRef100_P9WFE9,UniRef:UniRef50_P9WFE9,UniRef:UniRef90_P9WFE9;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2097204	2098937	.	+	.	ID=GCA000153685_01948_gene;locus_tag=GCA000153685_01948;gene=ureC
contig_1	Pyrodigal	CDS	2097204	2098937	.	+	0	ID=GCA000153685_01948;Name=urease subunit alpha;locus_tag=GCA000153685_01948;product=urease subunit alpha;Dbxref=GO:0005737,GO:0008152,GO:0009039,GO:0016151,GO:0043419;gene=ureC;Parent=GCA000153685_01948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01428,RefSeq:WP_003899049.1,SO:0001217,UniParc:UPI0000137D73,UniRef:UniRef100_P9WFF1,UniRef:UniRef50_P9WFF1,UniRef:UniRef90_P9WFF1;ec_number=3.5.1.5
contig_1	Infernal	gene	2097366	2097660	.	-	.	ID=GCA000153685_01949_gene;locus_tag=GCA000153685_01949;gene=5_ureB_sRNA
contig_1	Infernal	ncRNA	2097366	2097660	2.9e-07	-	.	ID=GCA000153685_01949;Name=5' ureB small RNA;locus_tag=GCA000153685_01949;product=5' ureB small RNA;Dbxref=RFAM:RF02514;Parent=GCA000153685_01949_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02514
contig_1	Pyrodigal	gene	2098937	2099572	.	+	.	ID=GCA000153685_01950_gene;locus_tag=GCA000153685_01950;gene=ureF
contig_1	Pyrodigal	CDS	2098937	2099572	.	+	0	ID=GCA000153685_01950;Name=Urease accessory protein UreF;locus_tag=GCA000153685_01950;product=Urease accessory protein UreF;Dbxref=GO:0005737,GO:0016151;gene=ureF;Parent=GCA000153685_01950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899050.1,SO:0001217,UniParc:UPI0000137DD2,UniRef:UniRef100_P9WFE5,UniRef:UniRef50_P9WFE5,UniRef:UniRef90_P9WFE5
contig_1	Pyrodigal	gene	2099583	2100257	.	+	.	ID=GCA000153685_01951_gene;locus_tag=GCA000153685_01951;gene=ureG
contig_1	Pyrodigal	CDS	2099583	2100257	.	+	0	ID=GCA000153685_01951;Name=urease accessory protein UreG;locus_tag=GCA000153685_01951;product=urease accessory protein UreG;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872;gene=ureG;Parent=GCA000153685_01951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03189,RefSeq:WP_003409313.1,SO:0001217,UniParc:UPI0000137DE2,UniRef:UniRef100_P9WFE3,UniRef:UniRef50_P18319,UniRef:UniRef90_P9WFE3
contig_1	Pyrodigal	gene	2100211	2100891	.	+	.	ID=GCA000153685_01952_gene;locus_tag=GCA000153685_01952;gene=ureD
contig_1	Pyrodigal	CDS	2100211	2100891	.	+	0	ID=GCA000153685_01952;Name=Urease accessory protein UreD;locus_tag=GCA000153685_01952;product=Urease accessory protein UreD;gene=ureD;Parent=GCA000153685_01952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03190,SO:0001217,UniParc:UPI00000CCBEE,UniRef:UniRef100_Q7D7W8,UniRef:UniRef50_A0A498Q470,UniRef:UniRef90_Q7D7W8
contig_1	Pyrodigal	gene	2100894	2102285	.	-	.	ID=GCA000153685_01953_gene;locus_tag=GCA000153685_01953;gene=ndh
contig_1	Pyrodigal	CDS	2100894	2102285	.	-	0	ID=GCA000153685_01953;Name=Type II NADH:quinone oxidoreductase Ndh;locus_tag=GCA000153685_01953;product=Type II NADH:quinone oxidoreductase Ndh;Dbxref=GO:0003955,GO:0005886,GO:0006116,GO:0019646,GO:0050136;gene=ndh;Parent=GCA000153685_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_003409317.1,SO:0001217,UniParc:UPI00000D5F6C,UniRef:UniRef100_P95160,UniRef:UniRef50_P95160,UniRef:UniRef90_P95160;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	2102427	2103350	.	-	.	ID=GCA000153685_01954_gene;locus_tag=GCA000153685_01954
contig_1	Pyrodigal	CDS	2102427	2103350	.	-	0	ID=GCA000153685_01954;Name=Oxidoreductase;locus_tag=GCA000153685_01954;product=Oxidoreductase;Parent=GCA000153685_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409319.1,SO:0001217,UniParc:UPI00000D5E31,UniRef:UniRef100_P95159,UniRef:UniRef50_A0A6N7C4M6,UniRef:UniRef90_A0A655J6F7
contig_1	Pyrodigal	gene	2103389	2104060	.	-	.	ID=GCA000153685_01955_gene;locus_tag=GCA000153685_01955
contig_1	Pyrodigal	CDS	2103389	2104060	.	-	0	ID=GCA000153685_01955;Name=SDR family oxidoreductase;locus_tag=GCA000153685_01955;product=SDR family oxidoreductase;Dbxref=GO:0005886,GO:0016616,GO:0030497;Parent=GCA000153685_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911688.1,SO:0001217,UniParc:UPI0001DD02B9,UniRef:UniRef100_P9WGQ1,UniRef:UniRef50_P9WGQ1,UniRef:UniRef90_P9WGQ1;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2104267	2105013	.	+	.	ID=GCA000153685_01956_gene;locus_tag=GCA000153685_01956;gene=modA
contig_1	Pyrodigal	CDS	2104267	2105013	.	+	0	ID=GCA000153685_01956;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000153685_01956;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0005886,GO:0015412,GO:0015689,GO:0030288,GO:0030973,GO:0046872,GO:0051701,GO:0055052;gene=modA;Parent=GCA000153685_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5DC,UniRef:UniRef100_P9WGU3,UniRef:UniRef50_P9WGU3,UniRef:UniRef90_P9WGU3
contig_1	Pyrodigal	gene	2105016	2105810	.	+	.	ID=GCA000153685_01957_gene;locus_tag=GCA000153685_01957;gene=modB
contig_1	Pyrodigal	CDS	2105016	2105810	.	+	0	ID=GCA000153685_01957;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000153685_01957;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015098,GO:0015412,GO:0015689,GO:0055052;gene=modB;Parent=GCA000153685_01957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409329.1,SO:0001217,UniParc:UPI000012F37A,UniRef:UniRef100_P9WG13,UniRef:UniRef50_P9WG13,UniRef:UniRef90_P9WG13
contig_1	Pyrodigal	gene	2105817	2106926	.	+	.	ID=GCA000153685_01958_gene;locus_tag=GCA000153685_01958;gene=modC
contig_1	Pyrodigal	CDS	2105817	2106926	.	+	0	ID=GCA000153685_01958;Name=Molybdenum import ATP-binding protein ModC;locus_tag=GCA000153685_01958;product=Molybdenum import ATP-binding protein ModC;Dbxref=GO:0005524,GO:0005886,GO:0015412,GO:0016887,GO:0022857,GO:0055085;gene=modC;Parent=GCA000153685_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899051.1,SO:0001217,UniParc:UPI000012F37F,UniRef:UniRef100_P9WQL3,UniRef:UniRef50_P9WQL3,UniRef:UniRef90_P9WQL3;ec_number=7.3.2.5
contig_1	Pyrodigal	gene	2106979	2107956	.	+	.	ID=GCA000153685_01959_gene;locus_tag=GCA000153685_01959;gene=apa
contig_1	Pyrodigal	CDS	2106979	2107956	.	+	0	ID=GCA000153685_01959;Name=adhesin Apa;locus_tag=GCA000153685_01959;product=adhesin Apa;Dbxref=GO:0005576,GO:0009267,GO:0009986,GO:0050840;gene=apa;Parent=GCA000153685_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911690,RefSeq:WP_003409337.1,SO:0001217,UniParc:UPI0000125C08,UniRef:UniRef100_O30620,UniRef:UniRef50_P9WIR7,UniRef:UniRef90_P9WIR7
contig_1	Pyrodigal	gene	2108408	2108713	.	+	.	ID=GCA000153685_01960_gene;locus_tag=GCA000153685_01960
contig_1	Pyrodigal	CDS	2108408	2108713	.	+	0	ID=GCA000153685_01960;Name=Conserved transmembrane protein;locus_tag=GCA000153685_01960;product=Conserved transmembrane protein;Parent=GCA000153685_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409339.1,SO:0001217,UniParc:UPI00000D1054,UniRef:UniRef100_A5U3M8,UniRef:UniRef50_A0A1A3NCI1,UniRef:UniRef90_A5U3M8
contig_1	Pyrodigal	gene	2108788	2109828	.	+	.	ID=GCA000153685_01961_gene;locus_tag=GCA000153685_01961;gene=adhA
contig_1	Pyrodigal	CDS	2108788	2109828	.	+	0	ID=GCA000153685_01961;Name=putative alcohol dehydrogenase AdhA;locus_tag=GCA000153685_01961;product=putative alcohol dehydrogenase AdhA;Dbxref=GO:0004022,GO:0008270,GO:0016616;gene=adhA;Parent=GCA000153685_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13953,RefSeq:WP_003409345.1,SO:0001217,UniParc:UPI00001652B0,UniRef:UniRef100_P9WQC1,UniRef:UniRef50_P9WQC1,UniRef:UniRef90_P9WQC1;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	2109835	2110557	.	-	.	ID=GCA000153685_01962_gene;locus_tag=GCA000153685_01962
contig_1	Pyrodigal	CDS	2109835	2110557	.	-	0	ID=GCA000153685_01962;Name=Integral membrane protein;locus_tag=GCA000153685_01962;product=Integral membrane protein;Parent=GCA000153685_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5E1,UniRef:UniRef100_R4MIN4,UniRef:UniRef50_A0A7W9UH32,UniRef:UniRef90_R4MIN4
contig_1	Pyrodigal	gene	2110598	2111353	.	-	.	ID=GCA000153685_01963_gene;locus_tag=GCA000153685_01963
contig_1	Pyrodigal	CDS	2110598	2111353	.	-	0	ID=GCA000153685_01963;Name=MOSC domain-containing protein;locus_tag=GCA000153685_01963;product=MOSC domain-containing protein;Parent=GCA000153685_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAI8XRG4,UniRef:UniRef90_R4M7M7
contig_1	Pyrodigal	gene	2111350	2112210	.	-	.	ID=GCA000153685_01964_gene;locus_tag=GCA000153685_01964
contig_1	Pyrodigal	CDS	2111350	2112210	.	-	0	ID=GCA000153685_01964;Name=Short-chain dehydrogenase;locus_tag=GCA000153685_01964;product=Short-chain dehydrogenase;Parent=GCA000153685_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409355.1,SO:0001217,UniParc:UPI00000D5FF0,UniRef:UniRef100_A5U3N2,UniRef:UniRef50_A0A655AEX7,UniRef:UniRef90_A0A655AEX7
contig_1	Pyrodigal	gene	2112384	2114720	.	+	.	ID=GCA000153685_01965_gene;locus_tag=GCA000153685_01965
contig_1	Pyrodigal	CDS	2112384	2114720	.	+	0	ID=GCA000153685_01965;Name=putative CoA-transferase Rv1866;locus_tag=GCA000153685_01965;product=putative CoA-transferase Rv1866;Dbxref=GO:0005886,GO:0009274,GO:0016740;Parent=GCA000153685_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409358.1,SO:0001217,UniParc:UPI00000C150D,UniRef:UniRef100_A5U3N3,UniRef:UniRef50_P95149,UniRef:UniRef90_P95149;ec_number=2.8.3.-
contig_1	Pyrodigal	gene	2115032	2116492	.	+	.	ID=GCA000153685_01966_gene;locus_tag=GCA000153685_01966
contig_1	Pyrodigal	CDS	2115032	2116492	.	+	0	ID=GCA000153685_01966;Name=acetyl-CoA acetyltransferase;locus_tag=GCA000153685_01966;product=acetyl-CoA acetyltransferase;Dbxref=GO:0016746;Parent=GCA000153685_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5E3,UniRef:UniRef100_A0A0H3LAT2,UniRef:UniRef50_A0A4Y9MT83,UniRef:UniRef90_A0AAQ2Z3G6
contig_1	Pyrodigal	gene	2116591	2118690	.	+	.	ID=GCA000153685_01967_gene;locus_tag=GCA000153685_01967
contig_1	Pyrodigal	CDS	2116591	2118690	.	+	0	ID=GCA000153685_01967;Name=NAD-dependent epimerase/dehydratase domain-containing protein;locus_tag=GCA000153685_01967;product=NAD-dependent epimerase/dehydratase domain-containing protein;Parent=GCA000153685_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409374.1,SO:0001217,UniParc:UPI00000D10E6,UniRef:UniRef100_P95147,UniRef:UniRef50_U5WJ10,UniRef:UniRef90_A0A8I0EN95
contig_1	Pyrodigal	gene	2118704	2119939	.	-	.	ID=GCA000153685_01968_gene;locus_tag=GCA000153685_01968
contig_1	Pyrodigal	CDS	2118704	2119939	.	-	0	ID=GCA000153685_01968;Name=Reductase;locus_tag=GCA000153685_01968;product=Reductase;Parent=GCA000153685_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899055.1,SO:0001217,UniParc:UPI00000D5E63,UniRef:UniRef100_A5U3N6,UniRef:UniRef50_A0A075UY93,UniRef:UniRef90_A0A654T4B2
contig_1	Pyrodigal	gene	2120039	2120653	.	-	.	ID=GCA000153685_01969_gene;locus_tag=GCA000153685_01969
contig_1	Pyrodigal	CDS	2120039	2120653	.	-	0	ID=GCA000153685_01969;Name=Endonuclease;locus_tag=GCA000153685_01969;product=Endonuclease;Parent=GCA000153685_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917541.1,SO:0001217,UniParc:UPI00005F6265,UniRef:UniRef100_P95145,UniRef:UniRef50_P95145,UniRef:UniRef90_P95145
contig_1	Pyrodigal	gene	2120739	2121116	.	-	.	ID=GCA000153685_01970_gene;locus_tag=GCA000153685_01970
contig_1	Pyrodigal	CDS	2120739	2121116	.	-	0	ID=GCA000153685_01970;Name=Conserved protein;locus_tag=GCA000153685_01970;product=Conserved protein;Parent=GCA000153685_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5E5,UniRef:UniRef100_P95144,UniRef:UniRef50_P95144,UniRef:UniRef90_P95144
contig_1	Pyrodigal	gene	2121151	2122395	.	-	.	ID=GCA000153685_01971_gene;locus_tag=GCA000153685_01971;gene=lldD
contig_1	Pyrodigal	CDS	2121151	2122395	.	-	0	ID=GCA000153685_01971;Name=quinone-dependent L-lactate dehydrogenase;locus_tag=GCA000153685_01971;product=quinone-dependent L-lactate dehydrogenase;Dbxref=GO:0005886,GO:0009274,GO:0010181,GO:0016491;gene=lldD;Parent=GCA000153685_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000586962,BlastRules:WP_003899057,BlastRules:WP_011015490,RefSeq:WP_003899057.1,SO:0001217,UniParc:UPI00000D0FA2,UniRef:UniRef100_P9WND5,UniRef:UniRef50_P9WND5,UniRef:UniRef90_P9WND5;ec_number=1.1.-.-
contig_1	Pyrodigal	gene	2122418	2122855	.	+	.	ID=GCA000153685_01972_gene;locus_tag=GCA000153685_01972
contig_1	Pyrodigal	CDS	2122418	2122855	.	+	0	ID=GCA000153685_01972;Name=Calpastatin;locus_tag=GCA000153685_01972;product=Calpastatin;Parent=GCA000153685_01972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409385.1,SO:0001217,UniParc:UPI00001652B1,UniRef:UniRef100_O07756,UniRef:UniRef50_O07756,UniRef:UniRef90_O07756
contig_1	Pyrodigal	gene	2122910	2123614	.	+	.	ID=GCA000153685_01973_gene;locus_tag=GCA000153685_01973;gene=ethD
contig_1	Pyrodigal	CDS	2122910	2123614	.	+	0	ID=GCA000153685_01973;Name=EthD domain-containing protein;locus_tag=GCA000153685_01973;product=EthD domain-containing protein;gene=ethD;Parent=GCA000153685_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899058.1,SO:0001217,UniParc:UPI00005EE5E6,UniRef:UniRef100_A0A0H3L9P0,UniRef:UniRef50_A0QY84,UniRef:UniRef90_A0A829C8D5
contig_1	Pyrodigal	gene	2123625	2124068	.	+	.	ID=GCA000153685_01974_gene;locus_tag=GCA000153685_01974
contig_1	Pyrodigal	CDS	2123625	2124068	.	+	0	ID=GCA000153685_01974;Name=Conserved protein;locus_tag=GCA000153685_01974;product=Conserved protein;Parent=GCA000153685_01974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899059.1,SO:0001217,UniParc:UPI00000D10A8,UniRef:UniRef100_O07754,UniRef:UniRef50_O07754,UniRef:UniRef90_O07754
contig_1	Pyrodigal	gene	2124584	2125063	.	+	.	ID=GCA000153685_01975_gene;locus_tag=GCA000153685_01975;gene=bfrA
contig_1	Pyrodigal	CDS	2124584	2125063	.	+	0	ID=GCA000153685_01975;Name=bacterioferritin BfrA;locus_tag=GCA000153685_01975;product=bacterioferritin BfrA;Dbxref=GO:0004322,GO:0005506,GO:0005576,GO:0005829,GO:0005886,GO:0006879,GO:0006880,GO:0008199,GO:0010039,GO:0015093,GO:0020037;gene=bfrA;Parent=GCA000153685_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409398,RefSeq:WP_003409398.1,SO:0001217,UniParc:UPI00001268BE,UniRef:UniRef100_P9WPQ9,UniRef:UniRef50_P9WPQ9,UniRef:UniRef90_P9WPQ9;ec_number=1.16.3.1
contig_1	Pyrodigal	gene	2125148	2127211	.	+	.	ID=GCA000153685_01976_gene;locus_tag=GCA000153685_01976;gene=mdt
contig_1	Pyrodigal	CDS	2125148	2127211	.	+	0	ID=GCA000153685_01976;Name=Rv1877 family multidrug efflux MFS transporter;locus_tag=GCA000153685_01976;product=Rv1877 family multidrug efflux MFS transporter;Dbxref=GO:0005886,GO:0022857,GO:0055085;gene=mdt;Parent=GCA000153685_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:CNC42950.1,RefSeq:WP_003899060.1,SO:0001217,UniParc:UPI00000D5E90,UniRef:UniRef100_P9WG85,UniRef:UniRef50_P9WG85,UniRef:UniRef90_P9WG85
contig_1	Pyrodigal	gene	2127257	2128618	.	+	.	ID=GCA000153685_01977_gene;locus_tag=GCA000153685_01977
contig_1	Pyrodigal	CDS	2127257	2128618	.	+	0	ID=GCA000153685_01977;Name=Glutamine synthetase;locus_tag=GCA000153685_01977;product=Glutamine synthetase;Parent=GCA000153685_01977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01915,SO:0001217,UniParc:UPI0001E61DEA,UniRef:UniRef100_A5U3P5,UniRef:UniRef50_A0A7J5WUI4,UniRef:UniRef90_A0A654TXG0;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	2128621	2129757	.	+	.	ID=GCA000153685_01978_gene;locus_tag=GCA000153685_01978
contig_1	Pyrodigal	CDS	2128621	2129757	.	+	0	ID=GCA000153685_01978;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000153685_01978;product=Amidohydrolase-related domain-containing protein;Parent=GCA000153685_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899061.1,SO:0001217,UniParc:UPI00000D1072,UniRef:UniRef100_O07751,UniRef:UniRef50_A0A7I9YQJ4,UniRef:UniRef90_O07751
contig_1	Pyrodigal	gene	2129785	2131101	.	-	.	ID=GCA000153685_01979_gene;locus_tag=GCA000153685_01979;gene=cyp140
contig_1	Pyrodigal	CDS	2129785	2131101	.	-	0	ID=GCA000153685_01979;Name=Putative cytochrome P450 140;locus_tag=GCA000153685_01979;product=Putative cytochrome P450 140;Dbxref=GO:0005506,GO:0006707,GO:0008395,GO:0020037,GO:0036199;gene=cyp140;Parent=GCA000153685_01979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409406.1,SO:0001217,UniParc:UPI0000126BBD,UniRef:UniRef100_P9WPL9,UniRef:UniRef50_P9WPL9,UniRef:UniRef90_P9WPL9;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2131151	2131573	.	-	.	ID=GCA000153685_01980_gene;locus_tag=GCA000153685_01980;gene=lppE
contig_1	Pyrodigal	CDS	2131151	2131573	.	-	0	ID=GCA000153685_01980;Name=putative lipoprotein LppE;locus_tag=GCA000153685_01980;product=putative lipoprotein LppE;Dbxref=GO:0005886,GO:0009274;gene=lppE;Parent=GCA000153685_01980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409409.1,SO:0001217,UniParc:UPI00000D3B06,UniRef:UniRef100_O07750,UniRef:UniRef50_O07750,UniRef:UniRef90_O07750
contig_1	Pyrodigal	gene	2131614	2132447	.	-	.	ID=GCA000153685_01981_gene;locus_tag=GCA000153685_01981
contig_1	Pyrodigal	CDS	2131614	2132447	.	-	0	ID=GCA000153685_01981;Name=SDR family oxidoreductase;locus_tag=GCA000153685_01981;product=SDR family oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_01981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409413.1,SO:0001217,UniParc:UPI00000D5E61,UniRef:UniRef100_A5U3P9,UniRef:UniRef50_Q73ZJ8,UniRef:UniRef90_A5U3P9
contig_1	Pyrodigal	gene	2132475	2132951	.	-	.	ID=GCA000153685_01982_gene;locus_tag=GCA000153685_01982
contig_1	Pyrodigal	CDS	2132475	2132951	.	-	0	ID=GCA000153685_01982;Name=Coenzyme Q-binding protein COQ10 START domain-containing protein;locus_tag=GCA000153685_01982;product=Coenzyme Q-binding protein COQ10 START domain-containing protein;Parent=GCA000153685_01982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409417.1,SO:0001217,UniParc:UPI00000D2C69,UniRef:UniRef100_A0A1R3XZN9,UniRef:UniRef50_O07748,UniRef:UniRef90_O07748
contig_1	Pyrodigal	gene	2132990	2133421	.	-	.	ID=GCA000153685_01983_gene;locus_tag=GCA000153685_01983;gene=rpfC
contig_1	Pyrodigal	CDS	2132990	2133421	.	-	0	ID=GCA000153685_01983;Name=resuscitation-promoting factor RpfC;locus_tag=GCA000153685_01983;product=resuscitation-promoting factor RpfC;Dbxref=GO:0005576,GO:0009372,GO:0010628,GO:0010629,GO:0016787,GO:0042127;gene=rpfC;Parent=GCA000153685_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21689,RefSeq:WP_003917544.1,SO:0001217,UniParc:UPI0001FB6BBB,UniRef:UniRef100_H8F3N4,UniRef:UniRef50_O07747,UniRef:UniRef90_O07747;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2133532	2134131	.	-	.	ID=GCA000153685_01984_gene;locus_tag=GCA000153685_01984
contig_1	Pyrodigal	CDS	2133532	2134131	.	-	0	ID=GCA000153685_01984;Name=chorismate mutase;locus_tag=GCA000153685_01984;product=chorismate mutase;Dbxref=GO:0004106,GO:0005576,GO:0009697,GO:0046417;Parent=GCA000153685_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899064.1,SO:0001217,UniParc:UPI00000D5FC2,UniRef:UniRef100_P9WIB9,UniRef:UniRef50_P9WIB9,UniRef:UniRef90_P9WIB9;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	2134149	2135081	.	-	.	ID=GCA000153685_01985_gene;locus_tag=GCA000153685_01985;gene=ag85B
contig_1	Pyrodigal	CDS	2134149	2135081	.	-	0	ID=GCA000153685_01985;Name=diacylglycerol acyltransferase/mycolyltransferase Ag85B;locus_tag=GCA000153685_01985;product=diacylglycerol acyltransferase/mycolyltransferase Ag85B;Dbxref=GO:0001968,GO:0004144,GO:0005576,GO:0005886,GO:0009274,GO:0010756,GO:0016747,GO:0035375,GO:0040009,GO:0046677,GO:0050348,GO:0052572;gene=ag85B;Parent=GCA000153685_01985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409456,SO:0001217,UniParc:UPI00005EE5EB,UniRef:UniRef100_P9WQP1,UniRef:UniRef50_P9WQP3,UniRef:UniRef90_P9WQP1;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	2135194	2135376	.	+	.	ID=GCA000153685_01986_gene;locus_tag=GCA000153685_01986
contig_1	Pyrodigal	CDS	2135194	2135376	.	+	0	ID=GCA000153685_01986;Name=hypothetical protein;locus_tag=GCA000153685_01986;product=hypothetical protein;Parent=GCA000153685_01986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C55055,UniRef:UniRef100_A0A0E9AD05,UniRef:UniRef50_A0A0E9AD05,UniRef:UniRef90_A0A0E9AD05
contig_1	Pyrodigal	gene	2135517	2136659	.	+	.	ID=GCA000153685_01987_gene;locus_tag=GCA000153685_01987
contig_1	Pyrodigal	CDS	2135517	2136659	.	+	0	ID=GCA000153685_01987;Name=FHA domain-containing protein;locus_tag=GCA000153685_01987;product=FHA domain-containing protein;Parent=GCA000153685_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899065.1,SO:0001217,UniParc:UPI00001652B3,UniRef:UniRef100_O07745,UniRef:UniRef50_A0A3E1HED1,UniRef:UniRef90_O07745
contig_1	Pyrodigal	gene	2136629	2137348	.	-	.	ID=GCA000153685_01988_gene;locus_tag=GCA000153685_01988
contig_1	Pyrodigal	CDS	2136629	2137348	.	-	0	ID=GCA000153685_01988;Name=putative transmembrane protein;locus_tag=GCA000153685_01988;product=putative transmembrane protein;Parent=GCA000153685_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409492.1,SO:0001217,UniParc:UPI00001A906B,UniRef:UniRef100_O07744,UniRef:UniRef50_R4LVS5,UniRef:UniRef90_O07744
contig_1	Pyrodigal	gene	2137713	2137886	.	-	.	ID=GCA000153685_01989_gene;locus_tag=GCA000153685_01989
contig_1	Pyrodigal	CDS	2137713	2137886	.	-	0	ID=GCA000153685_01989;Name=S-adenosyl-L-methionine-dependent methyltransferase;locus_tag=GCA000153685_01989;product=S-adenosyl-L-methionine-dependent methyltransferase;Parent=GCA000153685_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A906C,UniRef:UniRef100_Q79FJ0,UniRef:UniRef50_Q79FJ0,UniRef:UniRef90_Q79FJ0
contig_1	Pyrodigal	gene	2137930	2138286	.	-	.	ID=GCA000153685_01990_gene;locus_tag=GCA000153685_01990
contig_1	Pyrodigal	CDS	2137930	2138286	.	-	0	ID=GCA000153685_01990;Name=S-adenosyl-L-methionine-dependent methyltransferase (Part1);locus_tag=GCA000153685_01990;product=S-adenosyl-L-methionine-dependent methyltransferase (Part1);Parent=GCA000153685_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D0F41,UniRef:UniRef100_O07743,UniRef:UniRef50_O07743,UniRef:UniRef90_O07743
contig_1	Pyrodigal	gene	2138345	2138884	.	-	.	ID=GCA000153685_01991_gene;locus_tag=GCA000153685_01991
contig_1	Pyrodigal	CDS	2138345	2138884	.	-	0	ID=GCA000153685_01991;Name=Lipid/polyisoprenoid-binding YceI-like domain-containing protein;locus_tag=GCA000153685_01991;product=Lipid/polyisoprenoid-binding YceI-like domain-containing protein;Parent=GCA000153685_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_047709627.1,SO:0001217,UniParc:UPI00031AC6CC,UniRef:UniRef100_A0AA44LMW2,UniRef:UniRef50_O07742,UniRef:UniRef90_O07742
contig_1	Infernal	gene	2138817	2138925	.	+	.	ID=GCA000153685_01992_gene;locus_tag=GCA000153685_01992;gene=AS1890
contig_1	Infernal	ncRNA	2138817	2138925	4.6e-24	+	.	ID=GCA000153685_01992;Name=AS1890 sRNA;locus_tag=GCA000153685_01992;product=AS1890 sRNA;Dbxref=RFAM:RF01780;Parent=GCA000153685_01992_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01780
contig_1	Pyrodigal	gene	2139010	2139417	.	+	.	ID=GCA000153685_01993_gene;locus_tag=GCA000153685_01993
contig_1	Pyrodigal	CDS	2139010	2139417	.	+	0	ID=GCA000153685_01993;Name=Secreted protein;locus_tag=GCA000153685_01993;product=Secreted protein;Parent=GCA000153685_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409509.1,SO:0001217,UniParc:UPI00000D1197,UniRef:UniRef100_O07741,UniRef:UniRef50_A0AAD1MTZ9,UniRef:UniRef90_R4M2Y1
contig_1	Pyrodigal	gene	2139434	2139745	.	+	.	ID=GCA000153685_01994_gene;locus_tag=GCA000153685_01994
contig_1	Pyrodigal	CDS	2139434	2139745	.	+	0	ID=GCA000153685_01994;Name=Membrane protein;locus_tag=GCA000153685_01994;product=Membrane protein;Parent=GCA000153685_01994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409512.1,SO:0001217,UniParc:UPI00000D1000,UniRef:UniRef100_A5U3R0,UniRef:UniRef50_Q73ZI7,UniRef:UniRef90_A5U3R0
contig_1	Pyrodigal	gene	2139755	2139973	.	+	.	ID=GCA000153685_01995_gene;locus_tag=GCA000153685_01995
contig_1	Pyrodigal	CDS	2139755	2139973	.	+	0	ID=GCA000153685_01995;Name=Rv1893-like;locus_tag=GCA000153685_01995;product=Rv1893-like;Parent=GCA000153685_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409515.1,SO:0001217,UniParc:UPI00000D0FC9,UniRef:UniRef100_O07739,UniRef:UniRef50_A0A1A3D541,UniRef:UniRef90_O07739
contig_1	Pyrodigal	gene	2140008	2141138	.	-	.	ID=GCA000153685_01996_gene;locus_tag=GCA000153685_01996;gene=yrpB
contig_1	Pyrodigal	CDS	2140008	2141138	.	-	0	ID=GCA000153685_01996;Name=Nitronate monooxygenase domain-containing protein;locus_tag=GCA000153685_01996;product=Nitronate monooxygenase domain-containing protein;gene=yrpB;Parent=GCA000153685_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2070,COG:R,RefSeq:WP_003409518.1,SO:0001217,UniParc:UPI00000D11A6,UniRef:UniRef100_O07738,UniRef:UniRef50_O07738,UniRef:UniRef90_O07738
contig_1	Pyrodigal	gene	2141790	2142944	.	+	.	ID=GCA000153685_01997_gene;locus_tag=GCA000153685_01997
contig_1	Pyrodigal	CDS	2141790	2142944	.	+	0	ID=GCA000153685_01997;Name=putative zinc-binding alcohol dehydrogenase Rv1895;locus_tag=GCA000153685_01997;product=putative zinc-binding alcohol dehydrogenase Rv1895;Dbxref=GO:0004022,GO:0008270;Parent=GCA000153685_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899067.1,SO:0001217,UniParc:UPI000016508D,UniRef:UniRef100_A0A0H3LA90,UniRef:UniRef50_O07737,UniRef:UniRef90_O07737;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	2142804	2143715	.	-	.	ID=GCA000153685_01998_gene;locus_tag=GCA000153685_01998
contig_1	Pyrodigal	CDS	2142804	2143715	.	-	0	ID=GCA000153685_01998;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_1908;locus_tag=GCA000153685_01998;product=Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_1908;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409526.1,SO:0001217,UniParc:UPI00000D105C,UniRef:UniRef100_P9WFH7,UniRef:UniRef50_Q9CBG0,UniRef:UniRef90_P9WFH7;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	2143720	2144205	.	-	.	ID=GCA000153685_01999_gene;locus_tag=GCA000153685_01999;gene=dtd
contig_1	Pyrodigal	CDS	2143720	2144205	.	-	0	ID=GCA000153685_01999;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000153685_01999;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0006399,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000153685_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016508E,UniRef:UniRef100_A0A0E8TT49,UniRef:UniRef50_P9WNS9,UniRef:UniRef90_P9WNS9;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	2144209	2144517	.	+	.	ID=GCA000153685_02000_gene;locus_tag=GCA000153685_02000
contig_1	Pyrodigal	CDS	2144209	2144517	.	+	0	ID=GCA000153685_02000;Name=UPF0045 protein Mb1933;locus_tag=GCA000153685_02000;product=UPF0045 protein Mb1933;Dbxref=GO:0005829;Parent=GCA000153685_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409536.1,SO:0001217,UniParc:UPI000013B352,UniRef:UniRef100_P9WFQ1,UniRef:UniRef50_P9WFQ1,UniRef:UniRef90_P9WFQ1
contig_1	Pyrodigal	gene	2144483	2144998	.	-	.	ID=GCA000153685_02001_gene;locus_tag=GCA000153685_02001;gene=lppD
contig_1	Pyrodigal	CDS	2144483	2144998	.	-	0	ID=GCA000153685_02001;Name=putative protein Mb1934c;locus_tag=GCA000153685_02001;product=putative protein Mb1934c;Dbxref=GO:0005576,GO:0005886;gene=lppD;Parent=GCA000153685_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409537.1,SO:0001217,UniParc:UPI00005EE5F3,UniRef:UniRef100_P9WK28,UniRef:UniRef50_P9WK29,UniRef:UniRef90_P9WK29
contig_1	Pyrodigal	gene	2145276	2145425	.	+	.	ID=GCA000153685_02002_gene;locus_tag=GCA000153685_02002;gene=lppD
contig_1	Pyrodigal	CDS	2145276	2145425	.	+	0	ID=GCA000153685_02002;Name=Conserved exported protein of putative function%2C lipoprotein LppD;locus_tag=GCA000153685_02002;product=Conserved exported protein of putative function%2C lipoprotein LppD;gene=lppD;Parent=GCA000153685_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019011E7,UniRef:UniRef100_A0A0T5XUL8,UniRef:UniRef50_A0A0T5XUL8,UniRef:UniRef90_A0A0T5XUL8
contig_1	Pyrodigal	gene	2145559	2146896	.	-	.	ID=GCA000153685_02003_gene;locus_tag=GCA000153685_02003;gene=lipJ
contig_1	Pyrodigal	CDS	2145559	2146896	.	-	0	ID=GCA000153685_02003;Name=Bifunctional lipase/adenylate cyclase LipJ;locus_tag=GCA000153685_02003;product=Bifunctional lipase/adenylate cyclase LipJ;Dbxref=GO:0004016,GO:0006171,GO:0006629,GO:0016787,GO:0030145,GO:0035556,GO:0042803;gene=lipJ;Parent=GCA000153685_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913292.1,SO:0001217,UniParc:UPI0000F51805,UniRef:UniRef100_Q8VJU6,UniRef:UniRef50_O07732,UniRef:UniRef90_O07732
contig_1	Pyrodigal	gene	2146976	2148268	.	+	.	ID=GCA000153685_02004_gene;locus_tag=GCA000153685_02004;gene=cinA
contig_1	Pyrodigal	CDS	2146976	2148268	.	+	0	ID=GCA000153685_02004;Name=competence/damage-inducible protein A;locus_tag=GCA000153685_02004;product=competence/damage-inducible protein A;Dbxref=GO:0005886;gene=cinA;Parent=GCA000153685_02004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900426.1,SO:0001217,UniParc:UPI00001279DA,UniRef:UniRef100_P9WPE3,UniRef:UniRef50_P9WPE3,UniRef:UniRef90_P9WPE3
contig_1	Pyrodigal	gene	2148320	2149618	.	-	.	ID=GCA000153685_02005_gene;locus_tag=GCA000153685_02005;gene=nanT
contig_1	Pyrodigal	CDS	2148320	2149618	.	-	0	ID=GCA000153685_02005;Name=Sialic acid-transport integral membrane protein NanT;locus_tag=GCA000153685_02005;product=Sialic acid-transport integral membrane protein NanT;gene=nanT;Parent=GCA000153685_02005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08178,SO:0001217,UniParc:UPI00035FE605,UniRef:UniRef100_A0A0T9MUE2,UniRef:UniRef50_A0A0K8PNG4,UniRef:UniRef90_A5U3S1
contig_1	Pyrodigal	gene	2149678	2150082	.	+	.	ID=GCA000153685_02006_gene;locus_tag=GCA000153685_02006
contig_1	Pyrodigal	CDS	2149678	2150082	.	+	0	ID=GCA000153685_02006;Name=Membrane protein;locus_tag=GCA000153685_02006;product=Membrane protein;Parent=GCA000153685_02006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08972,RefSeq:WP_003409542.1,SO:0001217,UniParc:UPI00001652B5,UniRef:UniRef100_Q7D7T6,UniRef:UniRef50_L7L628,UniRef:UniRef90_R4LVT7
contig_1	Pyrodigal	gene	2150265	2150699	.	+	.	ID=GCA000153685_02007_gene;locus_tag=GCA000153685_02007
contig_1	Pyrodigal	CDS	2150265	2150699	.	+	0	ID=GCA000153685_02007;Name=Anti-sigma factor antagonist;locus_tag=GCA000153685_02007;product=Anti-sigma factor antagonist;Parent=GCA000153685_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F52,UniRef:UniRef100_O07728,UniRef:UniRef50_O07728,UniRef:UniRef90_O07728
contig_1	Pyrodigal	gene	2150747	2151682	.	-	.	ID=GCA000153685_02008_gene;locus_tag=GCA000153685_02008;gene=dao
contig_1	Pyrodigal	CDS	2150747	2151682	.	-	0	ID=GCA000153685_02008;Name=D-amino-acid oxidase;locus_tag=GCA000153685_02008;product=D-amino-acid oxidase;Dbxref=GO:0003884,GO:0005576,GO:0005737,GO:0009274,GO:0019478,GO:0071949;gene=dao;Parent=GCA000153685_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E38F90,UniRef:UniRef100_A0A9P1L884,UniRef:UniRef50_P9WP27,UniRef:UniRef90_P9WP27;ec_number=1.4.3.3
contig_1	Pyrodigal	gene	2151739	2152209	.	-	.	ID=GCA000153685_02009_gene;locus_tag=GCA000153685_02009
contig_1	Pyrodigal	CDS	2151739	2152209	.	-	0	ID=GCA000153685_02009;Name=Lipoprotein;locus_tag=GCA000153685_02009;product=Lipoprotein;Parent=GCA000153685_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900428.1,SO:0001217,UniParc:UPI00001652B7,UniRef:UniRef100_O07726,UniRef:UniRef50_A0A0I9UJ80,UniRef:UniRef90_A0A829CEN9
contig_1	Infernal	gene	2151751	2151962	.	-	.	ID=GCA000153685_02010_gene;locus_tag=GCA000153685_02010;gene=npcTB_6715
contig_1	Infernal	ncRNA	2151751	2151962	2.7e-33	-	.	ID=GCA000153685_02010;Name=Mycobacterium sRNA 6715;locus_tag=GCA000153685_02010;product=Mycobacterium sRNA 6715;Dbxref=RFAM:RF02886;Parent=GCA000153685_02010_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02886
contig_1	Pyrodigal	gene	2152549	2153043	.	-	.	ID=GCA000153685_02011_gene;locus_tag=GCA000153685_02011
contig_1	Pyrodigal	CDS	2152549	2153043	.	-	0	ID=GCA000153685_02011;Name=DUF4262 domain-containing protein;locus_tag=GCA000153685_02011;product=DUF4262 domain-containing protein;Parent=GCA000153685_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911704.1,SO:0001217,UniParc:UPI00019011E6,UniRef:UniRef100_L0TAY1,UniRef:UniRef50_A0A829C587,UniRef:UniRef90_A0A829C587
contig_1	Pyrodigal	gene	2153203	2155425	.	-	.	ID=GCA000153685_02012_gene;locus_tag=GCA000153685_02012;gene=katG
contig_1	Pyrodigal	CDS	2153203	2155425	.	-	0	ID=GCA000153685_02012;Name=catalase-peroxidase;locus_tag=GCA000153685_02012;product=catalase-peroxidase;Dbxref=GO:0004096,GO:0004601,GO:0005576,GO:0005829,GO:0005886,GO:0006979,GO:0009274,GO:0016677,GO:0020037,GO:0042744,GO:0045739,GO:0046677,GO:0046872,GO:0070301,GO:0070402,GO:0070404;gene=katG;Parent=GCA000153685_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03782,RefSeq:WP_003899075.1,SO:0001217,UniParc:UPI000012706D,UniRef:UniRef100_P9WIE5,UniRef:UniRef50_P9WIE5,UniRef:UniRef90_P9WIE5,VFDB:VFC0282,VFDB:VFG001396;ec_number=1.11.1.21
contig_1	Pyrodigal	gene	2155463	2155915	.	-	.	ID=GCA000153685_02013_gene;locus_tag=GCA000153685_02013;gene=furA
contig_1	Pyrodigal	CDS	2155463	2155915	.	-	0	ID=GCA000153685_02013;Name=Transcriptional regulator FurA;locus_tag=GCA000153685_02013;product=Transcriptional regulator FurA;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0006979,GO:0008270,GO:0010039,GO:0045892,GO:1900376;gene=furA;Parent=GCA000153685_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22297,SO:0001217,UniParc:UPI0000165092,UniRef:UniRef100_A5U3S8,UniRef:UniRef50_P9WN87,UniRef:UniRef90_P9WN87
contig_1	Pyrodigal	gene	2156020	2156634	.	-	.	ID=GCA000153685_02014_gene;locus_tag=GCA000153685_02014
contig_1	Pyrodigal	CDS	2156020	2156634	.	-	0	ID=GCA000153685_02014;Name=UPF0098 protein Mb1945c;locus_tag=GCA000153685_02014;product=UPF0098 protein Mb1945c;Dbxref=GO:0005576;Parent=GCA000153685_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015456AF,UniRef:UniRef100_P9WFN5,UniRef:UniRef50_P9WFN3,UniRef:UniRef90_P9WFN5
contig_1	Pyrodigal	gene	2156696	2157118	.	-	.	ID=GCA000153685_02015_gene;locus_tag=GCA000153685_02015;gene=lppC
contig_1	Pyrodigal	CDS	2156696	2157118	.	-	0	ID=GCA000153685_02015;Name=Putative lipoprotein LppC;locus_tag=GCA000153685_02015;product=Putative lipoprotein LppC;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0009986;gene=lppC;Parent=GCA000153685_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A3BD,UniRef:UniRef100_P9WFN3,UniRef:UniRef50_P9WFN3,UniRef:UniRef90_P9WFN3
contig_1	Pyrodigal	gene	2157403	2158722	.	-	.	ID=GCA000153685_02016_gene;locus_tag=GCA000153685_02016;gene=fadB5
contig_1	Pyrodigal	CDS	2157403	2158722	.	-	0	ID=GCA000153685_02016;Name=putative oxidoreductase FadB5;locus_tag=GCA000153685_02016;product=putative oxidoreductase FadB5;gene=fadB5;Parent=GCA000153685_02016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002E3CAE0,UniRef:UniRef100_O07721,UniRef:UniRef50_A0A498Q158,UniRef:UniRef90_O07721
contig_1	Pyrodigal	gene	2158786	2158998	.	-	.	ID=GCA000153685_02017_gene;locus_tag=GCA000153685_02017
contig_1	Pyrodigal	CDS	2158786	2158998	.	-	0	ID=GCA000153685_02017;Name=hypothetical protein;locus_tag=GCA000153685_02017;product=hypothetical protein;Parent=GCA000153685_02017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004594F3C,UniRef:UniRef100_A0A0E8W8P6,UniRef:UniRef50_A0A0E8W8P6,UniRef:UniRef90_A0A0E8W8P6
contig_1	Pyrodigal	gene	2159237	2159644	.	-	.	ID=GCA000153685_02018_gene;locus_tag=GCA000153685_02018
contig_1	Pyrodigal	CDS	2159237	2159644	.	-	0	ID=GCA000153685_02018;Name=Polyketide cyclase / dehydrase and lipid transport;locus_tag=GCA000153685_02018;product=Polyketide cyclase / dehydrase and lipid transport;Parent=GCA000153685_02018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409577.1,SO:0001217,UniParc:UPI00000D1020,UniRef:UniRef100_O07719,UniRef:UniRef50_A0A024JYI4,UniRef:UniRef90_O07719
contig_1	Pyrodigal	gene	2159779	2162079	.	+	.	ID=GCA000153685_02019_gene;locus_tag=GCA000153685_02019;gene=aceA
contig_1	Pyrodigal	CDS	2159779	2162079	.	+	0	ID=GCA000153685_02019;Name=isocitrate lyase ICL2;locus_tag=GCA000153685_02019;product=isocitrate lyase ICL2;Dbxref=GO:0004451,GO:0006099,GO:0019752;gene=aceA;Parent=GCA000153685_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409584,KEGG:K01637,RefSeq:WP_003409584.1,SO:0001217,UniParc:UPI00001A9075,UniRef:UniRef100_Q7TZA8,UniRef:UniRef50_Q7TZA8,UniRef:UniRef90_Q7TZA8;ec_number=4.1.3.1
contig_1	Pyrodigal	gene	2162151	2162333	.	+	.	ID=GCA000153685_02020_gene;locus_tag=GCA000153685_02020
contig_1	Pyrodigal	CDS	2162151	2162333	.	+	0	ID=GCA000153685_02020;Name=hypothetical protein;locus_tag=GCA000153685_02020;product=hypothetical protein;Parent=GCA000153685_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002EA8A2A,UniRef:UniRef100_A0A0E8X3R7,UniRef:UniRef50_A0A0E8X3R7,UniRef:UniRef90_A0A0E8X3R7
contig_1	Pyrodigal	gene	2162249	2167075	.	-	.	ID=GCA000153685_02021_gene;locus_tag=GCA000153685_02021
contig_1	Pyrodigal	CDS	2162249	2167075	.	-	0	ID=GCA000153685_02021;Name=PPE family protein PPE42;locus_tag=GCA000153685_02021;product=PPE family protein PPE42;Parent=GCA000153685_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AA44LMV5,UniRef:UniRef90_A0AA44LMV5
contig_1	Pyrodigal	gene	2167380	2170265	.	-	.	ID=GCA000153685_02022_gene;locus_tag=GCA000153685_02022
contig_1	Pyrodigal	CDS	2167380	2170265	.	-	0	ID=GCA000153685_02022;Name=PPE family protein PPE35;locus_tag=GCA000153685_02022;product=PPE family protein PPE35;Parent=GCA000153685_02022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_023642203.1,SO:0001217,UniParc:UPI000169A3FB,UniRef:UniRef100_A0AA44LN07,UniRef:UniRef50_A0A1A3I8K9,UniRef:UniRef90_Q79FI8
contig_1	Pyrodigal	gene	2170714	2171178	.	-	.	ID=GCA000153685_02023_gene;locus_tag=GCA000153685_02023
contig_1	Pyrodigal	CDS	2170714	2171178	.	-	0	ID=GCA000153685_02023;Name=Conserved protein;locus_tag=GCA000153685_02023;product=Conserved protein;Parent=GCA000153685_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899082.1,SO:0001217,UniParc:UPI000004B725,UniRef:UniRef100_O53961,UniRef:UniRef50_O53961,UniRef:UniRef90_O53961
contig_1	Pyrodigal	gene	2171276	2172139	.	+	.	ID=GCA000153685_02024_gene;locus_tag=GCA000153685_02024
contig_1	Pyrodigal	CDS	2171276	2172139	.	+	0	ID=GCA000153685_02024;Name=Phospholipid/glycerol acyltransferase domain-containing protein;locus_tag=GCA000153685_02024;product=Phospholipid/glycerol acyltransferase domain-containing protein;Parent=GCA000153685_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900432.1,SO:0001217,UniParc:UPI00000D5E9A,UniRef:UniRef100_A5U3T9,UniRef:UniRef50_A0A1E8Q9K9,UniRef:UniRef90_R4M6J1
contig_1	Pyrodigal	gene	2172177	2173448	.	-	.	ID=GCA000153685_02025_gene;locus_tag=GCA000153685_02025
contig_1	Pyrodigal	CDS	2172177	2173448	.	-	0	ID=GCA000153685_02025;Name=phosphoserine phosphatase;locus_tag=GCA000153685_02025;product=phosphoserine phosphatase;Parent=GCA000153685_02025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409666.1,SO:0001217,UniParc:UPI00000D11AE,UniRef:UniRef100_O53963,UniRef:UniRef50_F5XMQ1,UniRef:UniRef90_O53963
contig_1	Pyrodigal	gene	2173753	2174835	.	+	.	ID=GCA000153685_02026_gene;locus_tag=GCA000153685_02026
contig_1	Pyrodigal	CDS	2173753	2174835	.	+	0	ID=GCA000153685_02026;Name=Beta-lactamase-related domain-containing protein;locus_tag=GCA000153685_02026;product=Beta-lactamase-related domain-containing protein;Parent=GCA000153685_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE5FF,UniRef:UniRef100_A5U3U1,UniRef:UniRef50_A0A7V8LNC9,UniRef:UniRef90_A0AAX1S3Q4
contig_1	Pyrodigal	gene	2174886	2176166	.	+	.	ID=GCA000153685_02027_gene;locus_tag=GCA000153685_02027;gene=lipD
contig_1	Pyrodigal	CDS	2174886	2176166	.	+	0	ID=GCA000153685_02027;Name=lipase LipD;locus_tag=GCA000153685_02027;product=lipase LipD;gene=lipD;Parent=GCA000153685_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911710,RefSeq:WP_003911710.1,SO:0001217,UniParc:UPI0000165094,UniRef:UniRef100_A5U3U2,UniRef:UniRef50_A0A378T7I9,UniRef:UniRef90_A0A8I0EMH8;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	2176203	2176583	.	-	.	ID=GCA000153685_02028_gene;locus_tag=GCA000153685_02028
contig_1	Pyrodigal	CDS	2176203	2176583	.	-	0	ID=GCA000153685_02028;Name=TIGR02611 family protein;locus_tag=GCA000153685_02028;product=TIGR02611 family protein;Parent=GCA000153685_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900434.1,SO:0001217,UniParc:UPI00001652BA,UniRef:UniRef100_P95289,UniRef:UniRef50_P95289,UniRef:UniRef90_P95289
contig_1	Pyrodigal	gene	2176740	2178602	.	+	.	ID=GCA000153685_02029_gene;locus_tag=GCA000153685_02029
contig_1	Pyrodigal	CDS	2176740	2178602	.	+	0	ID=GCA000153685_02029;Name=Acyl-CoA ligase;locus_tag=GCA000153685_02029;product=Acyl-CoA ligase;Parent=GCA000153685_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409680.1,SO:0001217,UniParc:UPI0000165095,UniRef:UniRef100_A5U3U4,UniRef:UniRef50_A0A3S4SKE7,UniRef:UniRef90_A0A5R1Z5G3
contig_1	Pyrodigal	gene	2178610	2179089	.	-	.	ID=GCA000153685_02030_gene;locus_tag=GCA000153685_02030;gene=mpt63
contig_1	Pyrodigal	CDS	2178610	2179089	.	-	0	ID=GCA000153685_02030;Name=immunoprotective protein Mpt63;locus_tag=GCA000153685_02030;product=immunoprotective protein Mpt63;Dbxref=GO:0005576,GO:0005615,GO:0009274;gene=mpt63;Parent=GCA000153685_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409684,RefSeq:WP_003409684.1,SO:0001217,UniParc:UPI000012F443,UniRef:UniRef100_P9WIP1,UniRef:UniRef50_P9WIP1,UniRef:UniRef90_P9WIP1
contig_1	Pyrodigal	gene	2179326	2180099	.	+	.	ID=GCA000153685_02031_gene;locus_tag=GCA000153685_02031
contig_1	Pyrodigal	CDS	2179326	2180099	.	+	0	ID=GCA000153685_02031;Name=DUF2071 domain-containing protein;locus_tag=GCA000153685_02031;product=DUF2071 domain-containing protein;Parent=GCA000153685_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09166,RefSeq:WP_003409685.1,SO:0001217,UniParc:UPI00001652BB,UniRef:UniRef100_P95287,UniRef:UniRef50_A0A2E8YVY6,UniRef:UniRef90_P95287
contig_1	Pyrodigal	gene	2180103	2180342	.	-	.	ID=GCA000153685_02032_gene;locus_tag=GCA000153685_02032
contig_1	Pyrodigal	CDS	2180103	2180342	.	-	0	ID=GCA000153685_02032;Name=SDR family oxidoreductase;locus_tag=GCA000153685_02032;product=SDR family oxidoreductase;Parent=GCA000153685_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F626E,UniRef:UniRef100_A5U3U7,UniRef:UniRef50_Q73ZF4,UniRef:UniRef90_A5U3U7
contig_1	Pyrodigal	gene	2180351	2180848	.	-	.	ID=GCA000153685_02033_gene;locus_tag=GCA000153685_02033
contig_1	Pyrodigal	CDS	2180351	2180848	.	-	0	ID=GCA000153685_02033;Name=7-alpha-hydroxysteroid dehydrogenase;locus_tag=GCA000153685_02033;product=7-alpha-hydroxysteroid dehydrogenase;Parent=GCA000153685_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F626F,UniRef:UniRef100_A0A0E8U4B4,UniRef:UniRef50_A0A0E8U4B4,UniRef:UniRef90_A0A0E8U4B4
contig_1	Pyrodigal	gene	2181549	2182073	.	-	.	ID=GCA000153685_02034_gene;locus_tag=GCA000153685_02034
contig_1	Pyrodigal	CDS	2181549	2182073	.	-	0	ID=GCA000153685_02034;Name=Glutamine amidotransferase;locus_tag=GCA000153685_02034;product=Glutamine amidotransferase;Parent=GCA000153685_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409694.1,SO:0001217,UniParc:UPI00000D0F24,UniRef:UniRef100_P95284,UniRef:UniRef50_R4LVW2,UniRef:UniRef90_R4LVW2
contig_1	Pyrodigal	gene	2182091	2182321	.	-	.	ID=GCA000153685_02035_gene;locus_tag=GCA000153685_02035
contig_1	Pyrodigal	CDS	2182091	2182321	.	-	0	ID=GCA000153685_02035;Name=Transcriptional regulator;locus_tag=GCA000153685_02035;product=Transcriptional regulator;Parent=GCA000153685_02035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13633,RefSeq:WP_003916914.1,SO:0001217,UniParc:UPI000169D5AB,UniRef:UniRef100_A0A0H3LB05,UniRef:UniRef50_A0A0J6W2L0,UniRef:UniRef90_A0A0H3LB05
contig_1	Pyrodigal	gene	2182318	2182596	.	-	.	ID=GCA000153685_02036_gene;locus_tag=GCA000153685_02036;gene=araC
contig_1	Pyrodigal	CDS	2182318	2182596	.	-	0	ID=GCA000153685_02036;Name=AraC family transcriptional regulator;locus_tag=GCA000153685_02036;product=AraC family transcriptional regulator;gene=araC;Parent=GCA000153685_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE602,UniRef:UniRef100_A0A0U0SV51,UniRef:UniRef50_A0A0U0SV51,UniRef:UniRef90_A0A0U0SV51
contig_1	Pyrodigal	gene	2183003	2183500	.	+	.	ID=GCA000153685_02037_gene;locus_tag=GCA000153685_02037;gene=tpx
contig_1	Pyrodigal	CDS	2183003	2183500	.	+	0	ID=GCA000153685_02037;Name=thiol peroxidase;locus_tag=GCA000153685_02037;product=thiol peroxidase;Dbxref=GO:0004601,GO:0005576,GO:0005829,GO:0006979,GO:0008379,GO:0009274,GO:0015036,GO:0016684,GO:0045454,GO:0051409,GO:0051920,GO:0098754;gene=tpx;Parent=GCA000153685_02037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11065,RefSeq:WP_003409700.1,SO:0001217,UniParc:UPI000004A4B5,UniRef:UniRef100_P9WG35,UniRef:UniRef50_P9WG35,UniRef:UniRef90_P9WG35;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	2183497	2184588	.	-	.	ID=GCA000153685_02038_gene;locus_tag=GCA000153685_02038
contig_1	Pyrodigal	CDS	2183497	2184588	.	-	0	ID=GCA000153685_02038;Name=Acyl-CoA dehydrogenase FadE18;locus_tag=GCA000153685_02038;product=Acyl-CoA dehydrogenase FadE18;Parent=GCA000153685_02038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900437.1,SO:0001217,UniParc:UPI00000D601A,UniRef:UniRef100_A5U3V2,UniRef:UniRef50_A0A3E2MV68,UniRef:UniRef90_A5U3V2
contig_1	Pyrodigal	gene	2184590	2185819	.	-	.	ID=GCA000153685_02039_gene;locus_tag=GCA000153685_02039;gene=fadE17
contig_1	Pyrodigal	CDS	2184590	2185819	.	-	0	ID=GCA000153685_02039;Name=Putative acyl-CoA dehydrogenase FadE17;locus_tag=GCA000153685_02039;product=Putative acyl-CoA dehydrogenase FadE17;Dbxref=GO:0009274,GO:0016627,GO:0050660;gene=fadE17;Parent=GCA000153685_02039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900438.1,SO:0001217,UniParc:UPI00000D5025,UniRef:UniRef100_P95280,UniRef:UniRef50_P95280,UniRef:UniRef90_P95280;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	2185834	2186790	.	-	.	ID=GCA000153685_02040_gene;locus_tag=GCA000153685_02040;gene=echA13
contig_1	Pyrodigal	CDS	2185834	2186790	.	-	0	ID=GCA000153685_02040;Name=Putative enoyl-CoA hydratase EchA13;locus_tag=GCA000153685_02040;product=Putative enoyl-CoA hydratase EchA13;Dbxref=GO:0006635,GO:0016829;gene=echA13;Parent=GCA000153685_02040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409707.1,SO:0001217,UniParc:UPI00000D5F97,UniRef:UniRef100_P95279,UniRef:UniRef50_P95279,UniRef:UniRef90_P95279
contig_1	Pyrodigal	gene	2187015	2188124	.	+	.	ID=GCA000153685_02041_gene;locus_tag=GCA000153685_02041;gene=ssuD
contig_1	Pyrodigal	CDS	2187015	2188124	.	+	0	ID=GCA000153685_02041;Name=3%2C6-diketocamphane 1%2C6 monooxygenase;locus_tag=GCA000153685_02041;product=3%2C6-diketocamphane 1%2C6 monooxygenase;gene=ssuD;Parent=GCA000153685_02041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_003904740.1,SO:0001217,UniParc:UPI00000D6016,UniRef:UniRef100_P95278,UniRef:UniRef50_A0A382BF46,UniRef:UniRef90_A0A447GEZ9
contig_1	Pyrodigal	gene	2188127	2190646	.	+	.	ID=GCA000153685_02042_gene;locus_tag=GCA000153685_02042
contig_1	Pyrodigal	CDS	2188127	2190646	.	+	0	ID=GCA000153685_02042;Name=putative oxygenase;locus_tag=GCA000153685_02042;product=putative oxygenase;Parent=GCA000153685_02042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409714.1,SO:0001217,UniParc:UPI00000D5F7A,UniRef:UniRef100_P95277,UniRef:UniRef50_P95277,UniRef:UniRef90_P95277
contig_1	Pyrodigal	gene	2190658	2191728	.	+	.	ID=GCA000153685_02043_gene;locus_tag=GCA000153685_02043;gene=ephB
contig_1	Pyrodigal	CDS	2190658	2191728	.	+	0	ID=GCA000153685_02043;Name=epoxide hydrolase EphB;locus_tag=GCA000153685_02043;product=epoxide hydrolase EphB;Dbxref=GO:0004301,GO:0009636,GO:0016787,GO:0042803;gene=ephB;Parent=GCA000153685_02043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899091,RefSeq:WP_003899091.1,SO:0001217,UniParc:UPI00000D5F00,UniRef:UniRef100_I6YC03,UniRef:UniRef50_I6YC03,UniRef:UniRef90_I6YC03;ec_number=3.3.2.10
contig_1	Pyrodigal	gene	2191725	2192240	.	+	.	ID=GCA000153685_02044_gene;locus_tag=GCA000153685_02044
contig_1	Pyrodigal	CDS	2191725	2192240	.	+	0	ID=GCA000153685_02044;Name=Oxidoreductase;locus_tag=GCA000153685_02044;product=Oxidoreductase;Parent=GCA000153685_02044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409718.1,SO:0001217,UniParc:UPI00000D5F50,UniRef:UniRef100_A5U3V8,UniRef:UniRef50_A0A655JFJ3,UniRef:UniRef90_A0A655JS93
contig_1	Pyrodigal	gene	2192237	2193298	.	+	.	ID=GCA000153685_02045_gene;locus_tag=GCA000153685_02045
contig_1	Pyrodigal	CDS	2192237	2193298	.	+	0	ID=GCA000153685_02045;Name=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;locus_tag=GCA000153685_02045;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;Parent=GCA000153685_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899092.1,SO:0001217,UniParc:UPI00000D5FE5,UniRef:UniRef100_L7N669,UniRef:UniRef50_L7N669,UniRef:UniRef90_L7N669
contig_1	Pyrodigal	gene	2193295	2194065	.	+	.	ID=GCA000153685_02046_gene;locus_tag=GCA000153685_02046
contig_1	Pyrodigal	CDS	2193295	2194065	.	+	0	ID=GCA000153685_02046;Name=Short-chain dehydrogenase/reductase;locus_tag=GCA000153685_02046;product=Short-chain dehydrogenase/reductase;Parent=GCA000153685_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409775.1,SO:0001217,UniParc:UPI00000D5EC5,UniRef:UniRef100_A5U3W0,UniRef:UniRef50_A0A0U0SFS0,UniRef:UniRef90_A0A0U0SFS0
contig_1	Pyrodigal	gene	2194275	2194604	.	-	.	ID=GCA000153685_02047_gene;locus_tag=GCA000153685_02047;gene=mazF5
contig_1	Pyrodigal	CDS	2194275	2194604	.	-	0	ID=GCA000153685_02047;Name=putative endoribonuclease MazF5;locus_tag=GCA000153685_02047;product=putative endoribonuclease MazF5;Dbxref=GO:0003677,GO:0004521,GO:0006402,GO:0016075,GO:0045926;gene=mazF5;Parent=GCA000153685_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409778.1,SO:0001217,UniParc:UPI00001652BD,UniRef:UniRef100_P95272,UniRef:UniRef50_P95272,UniRef:UniRef90_P95272;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2194601	2194978	.	-	.	ID=GCA000153685_02048_gene;locus_tag=GCA000153685_02048;gene=mazE5
contig_1	Pyrodigal	CDS	2194601	2194978	.	-	0	ID=GCA000153685_02048;Name=type II toxin-antitoxin system antitoxin MazE5;locus_tag=GCA000153685_02048;product=type II toxin-antitoxin system antitoxin MazE5;Dbxref=GO:0045927;gene=mazE5;Parent=GCA000153685_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409780,KEGG:K26985,RefSeq:WP_003409780.1,SO:0001217,UniParc:UPI00000D1144,UniRef:UniRef100_P9WJ89,UniRef:UniRef50_P9WJ89,UniRef:UniRef90_P9WJ89
contig_1	Pyrodigal	gene	2194975	2195460	.	-	.	ID=GCA000153685_02049_gene;locus_tag=GCA000153685_02049
contig_1	Pyrodigal	CDS	2194975	2195460	.	-	0	ID=GCA000153685_02049;Name=SEC-C motif-containing protein;locus_tag=GCA000153685_02049;product=SEC-C motif-containing protein;Parent=GCA000153685_02049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911711.1,SO:0001217,UniParc:UPI00005EE606,UniRef:UniRef100_P95270,UniRef:UniRef50_A0A9P2M469,UniRef:UniRef90_A0A9P2M469
contig_1	Pyrodigal	gene	2195536	2196984	.	+	.	ID=GCA000153685_02050_gene;locus_tag=GCA000153685_02050
contig_1	Pyrodigal	CDS	2195536	2196984	.	+	0	ID=GCA000153685_02050;Name=putative protein Rv1945;locus_tag=GCA000153685_02050;product=putative protein Rv1945;Dbxref=GO:0003676,GO:0004519,GO:0008270;Parent=GCA000153685_02050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165097,UniRef:UniRef100_P9WLQ5,UniRef:UniRef50_P9WM55,UniRef:UniRef90_P9WM55
contig_1	Pyrodigal	gene	2197192	2197296	.	+	.	ID=GCA000153685_02051_gene;locus_tag=GCA000153685_02051
contig_1	Pyrodigal	CDS	2197192	2197296	.	+	0	ID=GCA000153685_02051;Name=hypothetical protein;locus_tag=GCA000153685_02051;product=hypothetical protein;Parent=GCA000153685_02051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019018C8,UniRef:UniRef100_A0A0H3LGY2,UniRef:UniRef50_A0A0H3LGY2,UniRef:UniRef90_A0A0H3LGY2
contig_1	Pyrodigal	gene	2197262	2197480	.	+	.	ID=GCA000153685_02052_gene;locus_tag=GCA000153685_02052
contig_1	Pyrodigal	CDS	2197262	2197480	.	+	0	ID=GCA000153685_02052;Name=hypothetical protein;locus_tag=GCA000153685_02052;product=hypothetical protein;Parent=GCA000153685_02052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE608,UniRef:UniRef100_A0A0U0R8F5,UniRef:UniRef50_A0A0U0R8F5,UniRef:UniRef90_A0A0U0R8F5
contig_1	Pyrodigal	gene	2197655	2198056	.	+	.	ID=GCA000153685_02053_gene;locus_tag=GCA000153685_02053
contig_1	Pyrodigal	CDS	2197655	2198056	.	+	0	ID=GCA000153685_02053;Name=hypothetical protein;locus_tag=GCA000153685_02053;product=hypothetical protein;Parent=GCA000153685_02053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409869.1,SO:0001217,UniParc:UPI00000D0FA1,UniRef:UniRef100_P95267,UniRef:UniRef50_P95267,UniRef:UniRef90_P95267
contig_1	Pyrodigal	gene	2198345	2198695	.	-	.	ID=GCA000153685_02054_gene;locus_tag=GCA000153685_02054
contig_1	Pyrodigal	CDS	2198345	2198695	.	-	0	ID=GCA000153685_02054;Name=hypothetical protein;locus_tag=GCA000153685_02054;product=hypothetical protein;Parent=GCA000153685_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899096.1,SO:0001217,UniParc:UPI00000D1114,UniRef:UniRef100_P95266,UniRef:UniRef50_R4M324,UniRef:UniRef90_P95266
contig_1	Pyrodigal	gene	2198706	2199608	.	-	.	ID=GCA000153685_02055_gene;locus_tag=GCA000153685_02055
contig_1	Pyrodigal	CDS	2198706	2199608	.	-	0	ID=GCA000153685_02055;Name=Transmembrane protein;locus_tag=GCA000153685_02055;product=Transmembrane protein;Parent=GCA000153685_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899097.1,SO:0001217,UniParc:UPI00000D2C72,UniRef:UniRef100_A5U3W8,UniRef:UniRef90_L0T9Q6
contig_1	Pyrodigal	gene	2199629	2199820	.	-	.	ID=GCA000153685_02056_gene;locus_tag=GCA000153685_02056
contig_1	Pyrodigal	CDS	2199629	2199820	.	-	0	ID=GCA000153685_02056;Name=Transmembrane protein;locus_tag=GCA000153685_02056;product=Transmembrane protein;Parent=GCA000153685_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409876.1,SO:0001217,UniParc:UPI00000D113B,UniRef:UniRef100_P95264,UniRef:UniRef50_P95264,UniRef:UniRef90_P95264
contig_1	Pyrodigal	gene	2199821	2200117	.	-	.	ID=GCA000153685_02057_gene;locus_tag=GCA000153685_02057
contig_1	Pyrodigal	CDS	2199821	2200117	.	-	0	ID=GCA000153685_02057;Name=PE family protein;locus_tag=GCA000153685_02057;product=PE family protein;Parent=GCA000153685_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409877.1,SO:0001217,UniParc:UPI00001652BE,UniRef:UniRef100_P95263,UniRef:UniRef50_P95263,UniRef:UniRef90_P95263
contig_1	Pyrodigal	gene	2200357	2200572	.	+	.	ID=GCA000153685_02058_gene;locus_tag=GCA000153685_02058;gene=vapB14
contig_1	Pyrodigal	CDS	2200357	2200572	.	+	0	ID=GCA000153685_02058;Name=Putative antitoxin VapB14;locus_tag=GCA000153685_02058;product=Putative antitoxin VapB14;Dbxref=GO:0006355;gene=vapB14;Parent=GCA000153685_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409878.1,SO:0001217,UniParc:UPI00000C14F2,UniRef:UniRef100_P95262,UniRef:UniRef50_P95262,UniRef:UniRef90_P95262
contig_1	Pyrodigal	gene	2200569	2200880	.	+	.	ID=GCA000153685_02059_gene;locus_tag=GCA000153685_02059;gene=vapC14
contig_1	Pyrodigal	CDS	2200569	2200880	.	+	0	ID=GCA000153685_02059;Name=Ribonuclease VapC14;locus_tag=GCA000153685_02059;product=Ribonuclease VapC14;Dbxref=GO:0004518,GO:0046872;gene=vapC14;Parent=GCA000153685_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409881.1,SO:0001217,UniParc:UPI00000D115C,UniRef:UniRef100_P9WF99,UniRef:UniRef50_P9WF99,UniRef:UniRef90_P9WF99;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2201034	2201210	.	+	.	ID=GCA000153685_02060_gene;locus_tag=GCA000153685_02060
contig_1	Pyrodigal	CDS	2201034	2201210	.	+	0	ID=GCA000153685_02060;Name=putative protein Rv1954A;locus_tag=GCA000153685_02060;product=putative protein Rv1954A;Parent=GCA000153685_02060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A50D74,UniRef:UniRef100_P0CV86,UniRef:UniRef50_P0CV86,UniRef:UniRef90_P0CV86
contig_1	Pyrodigal	gene	2201374	2201727	.	+	.	ID=GCA000153685_02061_gene;locus_tag=GCA000153685_02061;gene=higB
contig_1	Pyrodigal	CDS	2201374	2201727	.	+	0	ID=GCA000153685_02061;Name=type II toxin-antitoxin system toxin HigB;locus_tag=GCA000153685_02061;product=type II toxin-antitoxin system toxin HigB;gene=higB;Parent=GCA000153685_02061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000550189,BlastRules:WP_010886136,BlastRules:WP_012640638,RefSeq:WP_003905702.1,SO:0001217,UniParc:UPI00005EE60A,UniRef:UniRef100_A0A1R3Y1X7,UniRef:UniRef50_A0A1R3Y1X7,UniRef:UniRef90_A0A1R3Y1X7
contig_1	Pyrodigal	gene	2201769	2202218	.	+	.	ID=GCA000153685_02062_gene;locus_tag=GCA000153685_02062;gene=higA
contig_1	Pyrodigal	CDS	2201769	2202218	.	+	0	ID=GCA000153685_02062;Name=type II toxin-antitoxin system antitoxin HigA;locus_tag=GCA000153685_02062;product=type II toxin-antitoxin system antitoxin HigA;Dbxref=GO:0001666,GO:0003677,GO:0044003,GO:0045892,GO:0045927,GO:0097351;gene=higA;Parent=GCA000153685_02062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000560266,BlastRules:WP_003409886,BlastRules:WP_010920873,RefSeq:WP_003409886.1,SO:0001217,UniParc:UPI00000D6038,UniRef:UniRef100_P9WJA7,UniRef:UniRef50_P9WJA7,UniRef:UniRef90_P9WJA7
contig_1	Pyrodigal	gene	2202215	2202760	.	+	.	ID=GCA000153685_02063_gene;locus_tag=GCA000153685_02063;gene=secBL
contig_1	Pyrodigal	CDS	2202215	2202760	.	+	0	ID=GCA000153685_02063;Name=SecB-like chaperone Rv1957;locus_tag=GCA000153685_02063;product=SecB-like chaperone Rv1957;Dbxref=GO:0009274;gene=secBL;Parent=GCA000153685_02063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899098.1,SO:0001217,UniParc:UPI0000165098,UniRef:UniRef100_Q7D7P7,UniRef:UniRef50_P95257,UniRef:UniRef90_P95257
contig_1	Pyrodigal	gene	2202649	2203263	.	-	.	ID=GCA000153685_02064_gene;locus_tag=GCA000153685_02064
contig_1	Pyrodigal	CDS	2202649	2203263	.	-	0	ID=GCA000153685_02064;Name=PPE family protein;locus_tag=GCA000153685_02064;product=PPE family protein;Parent=GCA000153685_02064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901296.1,SO:0001217,UniParc:UPI00000C14BA,UniRef:UniRef100_P95256,UniRef:UniRef50_P95256,UniRef:UniRef90_P95256
contig_1	Pyrodigal	gene	2203312	2203608	.	-	.	ID=GCA000153685_02065_gene;locus_tag=GCA000153685_02065;gene=parE1
contig_1	Pyrodigal	CDS	2203312	2203608	.	-	0	ID=GCA000153685_02065;Name=Toxin ParE1;locus_tag=GCA000153685_02065;product=Toxin ParE1;Dbxref=GO:0044003;gene=parE1;Parent=GCA000153685_02065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409896.1,SO:0001217,UniParc:UPI00000D5F01,UniRef:UniRef100_P9WHG7,UniRef:UniRef50_P9WHG7,UniRef:UniRef90_P9WHG7
contig_1	Pyrodigal	gene	2203605	2203856	.	-	.	ID=GCA000153685_02066_gene;locus_tag=GCA000153685_02066;gene=parD
contig_1	Pyrodigal	CDS	2203605	2203856	.	-	0	ID=GCA000153685_02066;Name=Antitoxin ParD;locus_tag=GCA000153685_02066;product=Antitoxin ParD;Dbxref=GO:0006355;gene=parD;Parent=GCA000153685_02066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409899.1,SO:0001217,UniParc:UPI000013B4CB,UniRef:UniRef100_P9WIJ7,UniRef:UniRef50_P9WIJ7,UniRef:UniRef90_P9WIJ7
contig_1	Pyrodigal	gene	2203996	2204337	.	+	.	ID=GCA000153685_02067_gene;locus_tag=GCA000153685_02067
contig_1	Pyrodigal	CDS	2203996	2204337	.	+	0	ID=GCA000153685_02067;Name=hypothetical protein;locus_tag=GCA000153685_02067;product=hypothetical protein;Parent=GCA000153685_02067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE60B,UniRef:UniRef100_P95253,UniRef:UniRef50_P95253,UniRef:UniRef90_P95253
contig_1	Pyrodigal	gene	2204337	2204444	.	+	.	ID=GCA000153685_02068_gene;locus_tag=GCA000153685_02068
contig_1	Pyrodigal	CDS	2204337	2204444	.	+	0	ID=GCA000153685_02068;Name=hypothetical protein;locus_tag=GCA000153685_02068;product=hypothetical protein;Parent=GCA000153685_02068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2C75,UniRef:UniRef100_Q8VJT7,UniRef:UniRef50_P95253,UniRef:UniRef90_Q8VJT7
contig_1	Pyrodigal	gene	2204497	2204904	.	-	.	ID=GCA000153685_02069_gene;locus_tag=GCA000153685_02069;gene=vapC35
contig_1	Pyrodigal	CDS	2204497	2204904	.	-	0	ID=GCA000153685_02069;Name=Ribonuclease VapC35;locus_tag=GCA000153685_02069;product=Ribonuclease VapC35;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC35;Parent=GCA000153685_02069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409913.1,SO:0001217,UniParc:UPI00000D1005,UniRef:UniRef100_P9WF67,UniRef:UniRef50_P9WF67,UniRef:UniRef90_P9WF67;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2204908	2205180	.	-	.	ID=GCA000153685_02070_gene;locus_tag=GCA000153685_02070;gene=vapB35
contig_1	Pyrodigal	CDS	2204908	2205180	.	-	0	ID=GCA000153685_02070;Name=Antitoxin VapB35;locus_tag=GCA000153685_02070;product=Antitoxin VapB35;Dbxref=GO:0045927,GO:0097351;gene=vapB35;Parent=GCA000153685_02070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899100.1,SO:0001217,UniParc:UPI00000D2C76,UniRef:UniRef100_P9WF17,UniRef:UniRef50_P9WF17,UniRef:UniRef90_P9WF17
contig_1	Pyrodigal	gene	2205213	2206433	.	-	.	ID=GCA000153685_02071_gene;locus_tag=GCA000153685_02071;gene=mce3R
contig_1	Pyrodigal	CDS	2205213	2206433	.	-	0	ID=GCA000153685_02071;Name=TetR family transcriptional regulator Mce3R;locus_tag=GCA000153685_02071;product=TetR family transcriptional regulator Mce3R;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355,GO:0016042,GO:0019216,GO:0045892;gene=mce3R;Parent=GCA000153685_02071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409919,KEGG:K27107,RefSeq:WP_003409919.1,SO:0001217,UniParc:UPI00000D5F86,UniRef:UniRef100_P95251,UniRef:UniRef50_P95251,UniRef:UniRef90_P95251
contig_1	Pyrodigal	gene	2206581	2206838	.	+	.	ID=GCA000153685_02072_gene;locus_tag=GCA000153685_02072
contig_1	Pyrodigal	CDS	2206581	2206838	.	+	0	ID=GCA000153685_02072;Name=hypothetical protein;locus_tag=GCA000153685_02072;product=hypothetical protein;Parent=GCA000153685_02072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001534097,UniRef:UniRef100_A5U3Y3,UniRef:UniRef50_A5U3Y3,UniRef:UniRef90_A5U3Y3
contig_1	Pyrodigal	gene	2207332	2208129	.	+	.	ID=GCA000153685_02073_gene;locus_tag=GCA000153685_02073
contig_1	Pyrodigal	CDS	2207332	2208129	.	+	0	ID=GCA000153685_02073;Name=Integral membrane protein;locus_tag=GCA000153685_02073;product=Integral membrane protein;Parent=GCA000153685_02073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02066,RefSeq:WP_003899101.1,SO:0001217,UniParc:UPI000004B716,UniRef:UniRef100_A0A0H3LH04,UniRef:UniRef50_A0A439DT04,UniRef:UniRef90_A0A0H3LH04
contig_1	Pyrodigal	gene	2208139	2208954	.	+	.	ID=GCA000153685_02074_gene;locus_tag=GCA000153685_02074
contig_1	Pyrodigal	CDS	2208139	2208954	.	+	0	ID=GCA000153685_02074;Name=Integral membrane protein;locus_tag=GCA000153685_02074;product=Integral membrane protein;Parent=GCA000153685_02074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02066,RefSeq:WP_003899102.1,SO:0001217,UniParc:UPI000004B717,UniRef:UniRef100_L7N521,UniRef:UniRef50_A0A916THB4,UniRef:UniRef90_L7N521
contig_1	Pyrodigal	gene	2208959	2210236	.	+	.	ID=GCA000153685_02075_gene;locus_tag=GCA000153685_02075
contig_1	Pyrodigal	CDS	2208959	2210236	.	+	0	ID=GCA000153685_02075;Name=Mce-family protein Mce3A;locus_tag=GCA000153685_02075;product=Mce-family protein Mce3A;Parent=GCA000153685_02075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900443.1,SO:0001217,UniParc:UPI000004B718,UniRef:UniRef100_L7N698,UniRef:UniRef50_L7N698,UniRef:UniRef90_L7N698
contig_1	Pyrodigal	gene	2210233	2211261	.	+	.	ID=GCA000153685_02076_gene;locus_tag=GCA000153685_02076
contig_1	Pyrodigal	CDS	2210233	2211261	.	+	0	ID=GCA000153685_02076;Name=Mce-family protein Mce3B;locus_tag=GCA000153685_02076;product=Mce-family protein Mce3B;Parent=GCA000153685_02076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899104.1,SO:0001217,UniParc:UPI000004B719,UniRef:UniRef100_O53968,UniRef:UniRef50_O53968,UniRef:UniRef90_O53968
contig_1	Pyrodigal	gene	2211246	2212490	.	+	.	ID=GCA000153685_02077_gene;locus_tag=GCA000153685_02077
contig_1	Pyrodigal	CDS	2211246	2212490	.	+	0	ID=GCA000153685_02077;Name=Mce-family protein Mce3C;locus_tag=GCA000153685_02077;product=Mce-family protein Mce3C;Parent=GCA000153685_02077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE612,UniRef:UniRef100_A0A0E8X8P5,UniRef:UniRef50_O53969,UniRef:UniRef90_O53969
contig_1	Pyrodigal	gene	2212487	2213758	.	+	.	ID=GCA000153685_02078_gene;locus_tag=GCA000153685_02078
contig_1	Pyrodigal	CDS	2212487	2213758	.	+	0	ID=GCA000153685_02078;Name=Mce-family protein Mce3D;locus_tag=GCA000153685_02078;product=Mce-family protein Mce3D;Parent=GCA000153685_02078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899106.1,SO:0001217,UniParc:UPI00000D5F24,UniRef:UniRef100_O53970,UniRef:UniRef50_O53970,UniRef:UniRef90_O53970
contig_1	Pyrodigal	gene	2213755	2214888	.	+	.	ID=GCA000153685_02079_gene;locus_tag=GCA000153685_02079;gene=lprM
contig_1	Pyrodigal	CDS	2213755	2214888	.	+	0	ID=GCA000153685_02079;Name=Mce family lipoprotein LprM;locus_tag=GCA000153685_02079;product=Mce family lipoprotein LprM;gene=lprM;Parent=GCA000153685_02079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899107,RefSeq:WP_003899107.1,SO:0001217,UniParc:UPI00000D5E8B,UniRef:UniRef100_O53971,UniRef:UniRef50_O53971,UniRef:UniRef90_O53971
contig_1	Pyrodigal	gene	2214889	2216202	.	+	.	ID=GCA000153685_02080_gene;locus_tag=GCA000153685_02080
contig_1	Pyrodigal	CDS	2214889	2216202	.	+	0	ID=GCA000153685_02080;Name=Mce-family protein Mce3F;locus_tag=GCA000153685_02080;product=Mce-family protein Mce3F;Parent=GCA000153685_02080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899108.1,SO:0001217,UniParc:UPI000016509A,UniRef:UniRef100_A0A0H3LAF5,UniRef:UniRef50_A0A051TXX7,UniRef:UniRef90_O53972
contig_1	Pyrodigal	gene	2216224	2216799	.	+	.	ID=GCA000153685_02081_gene;locus_tag=GCA000153685_02081
contig_1	Pyrodigal	CDS	2216224	2216799	.	+	0	ID=GCA000153685_02081;Name=Mce associated membrane protein;locus_tag=GCA000153685_02081;product=Mce associated membrane protein;Parent=GCA000153685_02081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003899109.1,SO:0001217,UniParc:UPI00000D0F5C,UniRef:UniRef100_A5U3Z2,UniRef:UniRef50_A0A498PTB6,UniRef:UniRef90_R4M344
contig_1	Pyrodigal	gene	2216811	2217278	.	+	.	ID=GCA000153685_02082_gene;locus_tag=GCA000153685_02082
contig_1	Pyrodigal	CDS	2216811	2217278	.	+	0	ID=GCA000153685_02082;Name=Outer membrane protein Rv1973;locus_tag=GCA000153685_02082;product=Outer membrane protein Rv1973;Dbxref=GO:0009279;Parent=GCA000153685_02082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_251985548.1,SO:0001217,UniParc:UPI0002F5F731,UniRef:UniRef100_A0A0E8WZP2,UniRef:UniRef50_P9WJ77,UniRef:UniRef90_P9WJ77
contig_1	Pyrodigal	gene	2217309	2217668	.	+	.	ID=GCA000153685_02083_gene;locus_tag=GCA000153685_02083
contig_1	Pyrodigal	CDS	2217309	2217668	.	+	0	ID=GCA000153685_02083;Name=DUF732 domain-containing protein;locus_tag=GCA000153685_02083;product=DUF732 domain-containing protein;Parent=GCA000153685_02083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE617,UniRef:UniRef100_A5U3Z4,UniRef:UniRef50_R4LYN5,UniRef:UniRef90_R4LYN5
contig_1	Pyrodigal	gene	2217684	2218349	.	+	.	ID=GCA000153685_02084_gene;locus_tag=GCA000153685_02084
contig_1	Pyrodigal	CDS	2217684	2218349	.	+	0	ID=GCA000153685_02084;Name=SCP domain-containing protein;locus_tag=GCA000153685_02084;product=SCP domain-containing protein;Parent=GCA000153685_02084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899112.1,SO:0001217,UniParc:UPI00000D0F7D,UniRef:UniRef100_O53976,UniRef:UniRef50_A0A1A2N5K1,UniRef:UniRef90_O53976
contig_1	Pyrodigal	gene	2218476	2218808	.	-	.	ID=GCA000153685_02085_gene;locus_tag=GCA000153685_02085
contig_1	Pyrodigal	CDS	2218476	2218808	.	-	0	ID=GCA000153685_02085;Name=RNA-binding protein;locus_tag=GCA000153685_02085;product=RNA-binding protein;Parent=GCA000153685_02085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E39B01,UniRef:UniRef100_O53977,UniRef:UniRef50_O53977,UniRef:UniRef90_O53977
contig_1	Pyrodigal	gene	2219386	2220432	.	+	.	ID=GCA000153685_02086_gene;locus_tag=GCA000153685_02086
contig_1	Pyrodigal	CDS	2219386	2220432	.	+	0	ID=GCA000153685_02086;Name=Conserved protein;locus_tag=GCA000153685_02086;product=Conserved protein;Parent=GCA000153685_02086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899114.1,SO:0001217,UniParc:UPI00000D1058,UniRef:UniRef100_O53978,UniRef:UniRef50_A0A7K0D4R9,UniRef:UniRef90_O53978
contig_1	Pyrodigal	gene	2220540	2221388	.	+	.	ID=GCA000153685_02087_gene;locus_tag=GCA000153685_02087
contig_1	Pyrodigal	CDS	2220540	2221388	.	+	0	ID=GCA000153685_02087;Name=Type 11 methyltransferase;locus_tag=GCA000153685_02087;product=Type 11 methyltransferase;Parent=GCA000153685_02087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003409942.1,SO:0001217,UniParc:UPI00001652BF,UniRef:UniRef100_O53979,UniRef:UniRef50_I4BQF9,UniRef:UniRef90_A0A0T9VJD8
contig_1	Pyrodigal	gene	2221351	2222796	.	-	.	ID=GCA000153685_02088_gene;locus_tag=GCA000153685_02088
contig_1	Pyrodigal	CDS	2221351	2222796	.	-	0	ID=GCA000153685_02088;Name=putative transporter Rv1979c;locus_tag=GCA000153685_02088;product=putative transporter Rv1979c;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_02088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899115.1,SO:0001217,UniParc:UPI000016509B,UniRef:UniRef100_P9WQM5,UniRef:UniRef50_Q7TZ67,UniRef:UniRef90_Q7TZ67
contig_1	Pyrodigal	gene	2222975	2223661	.	-	.	ID=GCA000153685_02089_gene;locus_tag=GCA000153685_02089;gene=mpt64
contig_1	Pyrodigal	CDS	2222975	2223661	.	-	0	ID=GCA000153685_02089;Name=immunoprotective protein Mpt64;locus_tag=GCA000153685_02089;product=immunoprotective protein Mpt64;gene=mpt64;Parent=GCA000153685_02089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409954,RefSeq:WP_003409954.1,SO:0001217,UniParc:UPI000011D6B0,UniRef:UniRef100_P9WIN9,UniRef:UniRef90_P9WIN9
contig_1	Pyrodigal	gene	2223852	2224820	.	-	.	ID=GCA000153685_02090_gene;locus_tag=GCA000153685_02090;gene=nrdF
contig_1	Pyrodigal	CDS	2223852	2224820	.	-	0	ID=GCA000153685_02090;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000153685_02090;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009263,GO:0046872;gene=nrdF;Parent=GCA000153685_02090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899116.1,SO:0001217,UniParc:UPI000013398C,UniRef:UniRef100_P9WH73,UniRef:UniRef50_P9WH73,UniRef:UniRef90_P9WH73;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	2224817	2224912	.	-	.	ID=GCA000153685_02091_gene;locus_tag=GCA000153685_02091
contig_1	Pyrodigal	CDS	2224817	2224912	.	-	0	ID=GCA000153685_02091;Name=hypothetical protein;locus_tag=GCA000153685_02091;product=hypothetical protein;Parent=GCA000153685_02091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42C5,UniRef:UniRef100_A0A0E7TK80,UniRef:UniRef50_A0A0E7TK80,UniRef:UniRef90_A0A0E7TK80
contig_1	Pyrodigal	gene	2225045	2225464	.	-	.	ID=GCA000153685_02092_gene;locus_tag=GCA000153685_02092;gene=vapC36
contig_1	Pyrodigal	CDS	2225045	2225464	.	-	0	ID=GCA000153685_02092;Name=Ribonuclease VapC36;locus_tag=GCA000153685_02092;product=Ribonuclease VapC36;Dbxref=GO:0000287,GO:0004540;gene=vapC36;Parent=GCA000153685_02092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19686,RefSeq:WP_003899117.1,SO:0001217,UniParc:UPI000016509D,UniRef:UniRef100_P9WF64,UniRef:UniRef50_P9WF65,UniRef:UniRef90_P9WF65;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2225473	2225760	.	-	.	ID=GCA000153685_02093_gene;locus_tag=GCA000153685_02093;gene=vapB36
contig_1	Pyrodigal	CDS	2225473	2225760	.	-	0	ID=GCA000153685_02093;Name=Putative antitoxin VapB36;locus_tag=GCA000153685_02093;product=Putative antitoxin VapB36;gene=vapB36;Parent=GCA000153685_02093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003263761,UniRef:UniRef100_A0A0E8UBB9,UniRef:UniRef50_P9WJ29,UniRef:UniRef90_P9WJ29
contig_1	Pyrodigal	gene	2225876	2227552	.	+	.	ID=GCA000153685_02094_gene;locus_tag=GCA000153685_02094;gene=pecA
contig_1	Pyrodigal	CDS	2225876	2227552	.	+	0	ID=GCA000153685_02094;Name=PE cleavage protein A;locus_tag=GCA000153685_02094;product=PE cleavage protein A;Dbxref=GO:0004190,GO:0005576,GO:0006508,GO:0009986;gene=pecA;Parent=GCA000153685_02094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899118.1,SO:0001217,UniParc:UPI000013B4E1,UniRef:UniRef100_P9WIF1,UniRef:UniRef50_P9WIF1,UniRef:UniRef90_P9WIF1
contig_1	Pyrodigal	gene	2227540	2228193	.	-	.	ID=GCA000153685_02095_gene;locus_tag=GCA000153685_02095;gene=cfp21
contig_1	Pyrodigal	CDS	2227540	2228193	.	-	0	ID=GCA000153685_02095;Name=cutinase Cfp21;locus_tag=GCA000153685_02095;product=cutinase Cfp21;Dbxref=GO:0005576,GO:0009274,GO:0019626,GO:0034338,GO:0047372,GO:0051793,GO:0052651,GO:0106435;gene=cfp21;Parent=GCA000153685_02095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003409976,RefSeq:WP_003409976.1,SO:0001217,UniParc:UPI000003181B,UniRef:UniRef100_P9WP43,UniRef:UniRef50_P9WP43,UniRef:UniRef90_P9WP43;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2228308	2228538	.	+	.	ID=GCA000153685_02096_gene;locus_tag=GCA000153685_02096
contig_1	Pyrodigal	CDS	2228308	2228538	.	+	0	ID=GCA000153685_02096;Name=UPF0235 protein MRA_1997;locus_tag=GCA000153685_02096;product=UPF0235 protein MRA_1997;Dbxref=GO:0005737;Parent=GCA000153685_02096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09131,RefSeq:WP_003409980.1,SO:0001217,UniParc:UPI00000D2C7C,UniRef:UniRef100_A5U406,UniRef:UniRef50_A5U406,UniRef:UniRef90_A5U406
contig_1	Pyrodigal	gene	2228623	2229534	.	-	.	ID=GCA000153685_02097_gene;locus_tag=GCA000153685_02097;gene=lysG
contig_1	Pyrodigal	CDS	2228623	2229534	.	-	0	ID=GCA000153685_02097;Name=HTH-type transcriptional regulator LysG;locus_tag=GCA000153685_02097;product=HTH-type transcriptional regulator LysG;Dbxref=GO:0003677,GO:0003688,GO:0003700,GO:0006355,GO:0008156;gene=lysG;Parent=GCA000153685_02097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05596,RefSeq:WP_003409986.1,SO:0001217,UniParc:UPI000013B4E4,UniRef:UniRef100_P9WMF5,UniRef:UniRef50_P9WMF5,UniRef:UniRef90_P9WMF5
contig_1	Pyrodigal	gene	2229643	2230242	.	+	.	ID=GCA000153685_02098_gene;locus_tag=GCA000153685_02098;gene=lysE
contig_1	Pyrodigal	CDS	2229643	2230242	.	+	0	ID=GCA000153685_02098;Name=L-lysine exporter;locus_tag=GCA000153685_02098;product=L-lysine exporter;Dbxref=GO:0005886,GO:0006865,GO:0015171,GO:0016020;gene=lysE;Parent=GCA000153685_02098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06895,RefSeq:WP_003409989.1,SO:0001217,UniParc:UPI000013B4E7,UniRef:UniRef100_P9WK31,UniRef:UniRef50_P9WK31,UniRef:UniRef90_P9WK31
contig_1	Pyrodigal	gene	2230702	2230944	.	-	.	ID=GCA000153685_02099_gene;locus_tag=GCA000153685_02099
contig_1	Pyrodigal	CDS	2230702	2230944	.	-	0	ID=GCA000153685_02099;Name=Chitinase cellulase;locus_tag=GCA000153685_02099;product=Chitinase cellulase;Parent=GCA000153685_02099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00032565BB,UniRef:UniRef100_A0A0E8WYT6,UniRef:UniRef50_A0A051TZ52,UniRef:UniRef90_A0A0T7LR48
contig_1	Pyrodigal	gene	2231399	2231851	.	+	.	ID=GCA000153685_02100_gene;locus_tag=GCA000153685_02100;gene=erm(37)
contig_1	Pyrodigal	CDS	2231399	2231851	.	+	0	ID=GCA000153685_02100;Name=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);locus_tag=GCA000153685_02100;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);gene=erm(37);Parent=GCA000153685_02100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:WP_003900446.1,SO:0001217,UniParc:UPI00005EE61D,UniRef:UniRef100_A0A0E7Z6D0,UniRef:UniRef50_A0A0E7Z6D0,UniRef:UniRef90_A0A0E7Z6D0
contig_1	Pyrodigal	gene	2232371	2232931	.	-	.	ID=GCA000153685_02101_gene;locus_tag=GCA000153685_02101;gene=mbcT
contig_1	Pyrodigal	CDS	2232371	2232931	.	-	0	ID=GCA000153685_02101;Name=NAD(+) phosphorylase MbcT;locus_tag=GCA000153685_02101;product=NAD(+) phosphorylase MbcT;Dbxref=GO:0016779;gene=mbcT;Parent=GCA000153685_02101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410001.1,SO:0001217,UniParc:UPI000013B4EB,UniRef:UniRef100_P9WLP9,UniRef:UniRef50_P9WLP9,UniRef:UniRef90_P9WLP9;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	2232928	2233269	.	-	.	ID=GCA000153685_02102_gene;locus_tag=GCA000153685_02102;gene=mbcA
contig_1	Pyrodigal	CDS	2232928	2233269	.	-	0	ID=GCA000153685_02102;Name=Mycobacterial cidal antitoxin MbcA;locus_tag=GCA000153685_02102;product=Mycobacterial cidal antitoxin MbcA;gene=mbcA;Parent=GCA000153685_02102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410003.1,SO:0001217,UniParc:UPI000013B4EE,UniRef:UniRef100_P9WLP7,UniRef:UniRef50_P9WLP7,UniRef:UniRef90_P9WLP7
contig_1	Pyrodigal	gene	2233355	2233612	.	+	.	ID=GCA000153685_02103_gene;locus_tag=GCA000153685_02103
contig_1	Pyrodigal	CDS	2233355	2233612	.	+	0	ID=GCA000153685_02103;Name=hypothetical protein;locus_tag=GCA000153685_02103;product=hypothetical protein;Parent=GCA000153685_02103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410006.1,SO:0001217,UniParc:UPI000169A4D5,UniRef:UniRef100_A0A0H3LB74,UniRef:UniRef50_A0A0H3LB74,UniRef:UniRef90_A0A0H3LB74
contig_1	Pyrodigal	gene	2233513	2233848	.	-	.	ID=GCA000153685_02104_gene;locus_tag=GCA000153685_02104
contig_1	Pyrodigal	CDS	2233513	2233848	.	-	0	ID=GCA000153685_02104;Name=putative dehydrogenase;locus_tag=GCA000153685_02104;product=putative dehydrogenase;Parent=GCA000153685_02104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410009.1,SO:0001217,UniParc:UPI00000D2C7F,UniRef:UniRef100_L7N6A3,UniRef:UniRef50_L7N6A3,UniRef:UniRef90_L7N6A3
contig_1	Pyrodigal	gene	2233937	2234281	.	-	.	ID=GCA000153685_02105_gene;locus_tag=GCA000153685_02105;gene=mazF6
contig_1	Pyrodigal	CDS	2233937	2234281	.	-	0	ID=GCA000153685_02105;Name=type II toxin-antitoxin system toxin endoribonuclease MazF6;locus_tag=GCA000153685_02105;product=type II toxin-antitoxin system toxin endoribonuclease MazF6;Dbxref=GO:0003677,GO:0004521,GO:0004540,GO:0005576,GO:0006402,GO:0016075,GO:0044003,GO:0045926,GO:0045927;gene=mazF6;Parent=GCA000153685_02105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410010,RefSeq:WP_003410010.1,SO:0001217,UniParc:UPI000013B4F0,UniRef:UniRef100_P9WII3,UniRef:UniRef50_P9WII3,UniRef:UniRef90_P9WII3;ec_number=3.1.27.-
contig_1	Pyrodigal	gene	2234275	2234454	.	-	.	ID=GCA000153685_02106_gene;locus_tag=GCA000153685_02106;gene=mazE6
contig_1	Pyrodigal	CDS	2234275	2234454	.	-	0	ID=GCA000153685_02106;Name=Antitoxin MazE6;locus_tag=GCA000153685_02106;product=Antitoxin MazE6;Dbxref=GO:0003677,GO:0006355,GO:0045926,GO:0097351,GO:0098754;gene=mazE6;Parent=GCA000153685_02106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE61E,UniRef:UniRef100_P9WJ87,UniRef:UniRef50_P9WJ87,UniRef:UniRef90_P9WJ87
contig_1	Pyrodigal	gene	2234623	2236938	.	-	.	ID=GCA000153685_02107_gene;locus_tag=GCA000153685_02107;gene=ctpG
contig_1	Pyrodigal	CDS	2234623	2236938	.	-	0	ID=GCA000153685_02107;Name=cation transporter ATPase CptG;locus_tag=GCA000153685_02107;product=cation transporter ATPase CptG;Dbxref=GO:0003689,GO:0005524,GO:0005886,GO:0015086,GO:0016020,GO:0016887,GO:0019829,GO:0030001,GO:0046688,GO:0046872,GO:0055085,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ctpG;Parent=GCA000153685_02107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899120,KEGG:K12954,RefSeq:WP_003899120.1,SO:0001217,UniParc:UPI0000128645,UniRef:UniRef100_P9WPS7,UniRef:UniRef50_P9WPS7,UniRef:UniRef90_P9WPS7;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2236935	2237207	.	-	.	ID=GCA000153685_02108_gene;locus_tag=GCA000153685_02108
contig_1	Pyrodigal	CDS	2236935	2237207	.	-	0	ID=GCA000153685_02108;Name=putative protein MT2049;locus_tag=GCA000153685_02108;product=putative protein MT2049;Dbxref=GO:0005886;Parent=GCA000153685_02108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27044,RefSeq:WP_003410017.1,SO:0001217,UniParc:UPI000013B4F3,UniRef:UniRef100_P9WLP5,UniRef:UniRef50_P9WLP5,UniRef:UniRef90_P9WLP5
contig_1	Pyrodigal	gene	2237260	2237616	.	-	.	ID=GCA000153685_02109_gene;locus_tag=GCA000153685_02109;gene=cmtR
contig_1	Pyrodigal	CDS	2237260	2237616	.	-	0	ID=GCA000153685_02109;Name=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;locus_tag=GCA000153685_02109;product=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;Dbxref=GO:0003677,GO:0003700,GO:0010288,GO:0010468,GO:0032791,GO:0046686,GO:0046870,GO:0097063;gene=cmtR;Parent=GCA000153685_02109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410018,RefSeq:WP_003410018.1,SO:0001217,UniParc:UPI000013B4F6,UniRef:UniRef100_P9WMI9,UniRef:UniRef50_P9WMI9,UniRef:UniRef90_P9WMI9
contig_1	Pyrodigal	gene	2237812	2238540	.	+	.	ID=GCA000153685_02110_gene;locus_tag=GCA000153685_02110
contig_1	Pyrodigal	CDS	2237812	2238540	.	+	0	ID=GCA000153685_02110;Name=putative protein Rv1995;locus_tag=GCA000153685_02110;product=putative protein Rv1995;Dbxref=GO:0005886;Parent=GCA000153685_02110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003C7FB6D,UniRef:UniRef100_A0A0H3LH40,UniRef:UniRef50_P9WLP3,UniRef:UniRef90_P9WLP3
contig_1	Pyrodigal	gene	2238636	2239589	.	+	.	ID=GCA000153685_02111_gene;locus_tag=GCA000153685_02111
contig_1	Pyrodigal	CDS	2238636	2239589	.	+	0	ID=GCA000153685_02111;Name=Universal stress protein Mb2019;locus_tag=GCA000153685_02111;product=Universal stress protein Mb2019;Dbxref=GO:0005524;Parent=GCA000153685_02111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899121.1,SO:0001217,UniParc:UPI000013B4FB,UniRef:UniRef100_P9WLP1,UniRef:UniRef50_P9WLP1,UniRef:UniRef90_P9WLP1
contig_1	Pyrodigal	gene	2239845	2242508	.	+	.	ID=GCA000153685_02112_gene;locus_tag=GCA000153685_02112;gene=ctpF
contig_1	Pyrodigal	CDS	2239845	2242508	.	+	0	ID=GCA000153685_02112;Name=putative cation-transporting ATPase F;locus_tag=GCA000153685_02112;product=putative cation-transporting ATPase F;Dbxref=GO:0003689,GO:0005388,GO:0005524,GO:0005886,GO:0009274,GO:0016887,GO:0043231,GO:0046872,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ctpF;Parent=GCA000153685_02112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE620,UniRef:UniRef100_A0A0H3LAI3,UniRef:UniRef50_P9WPS9,UniRef:UniRef90_P9WPS9;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2242577	2243353	.	-	.	ID=GCA000153685_02113_gene;locus_tag=GCA000153685_02113
contig_1	Pyrodigal	CDS	2242577	2243353	.	-	0	ID=GCA000153685_02113;Name=putative protein Rv1998c;locus_tag=GCA000153685_02113;product=putative protein Rv1998c;Dbxref=GO:0003824;Parent=GCA000153685_02113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899122.1,SO:0001217,UniParc:UPI000013B4FD,UniRef:UniRef100_P9WLN9,UniRef:UniRef50_P9WLN9,UniRef:UniRef90_P9WLN9
contig_1	Pyrodigal	gene	2243448	2244770	.	-	.	ID=GCA000153685_02114_gene;locus_tag=GCA000153685_02114
contig_1	Pyrodigal	CDS	2243448	2244770	.	-	0	ID=GCA000153685_02114;Name=putative transporter Mb2022c;locus_tag=GCA000153685_02114;product=putative transporter Mb2022c;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_02114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410039.1,SO:0001217,UniParc:UPI000013B4FF,UniRef:UniRef100_P9WQM3,UniRef:UniRef50_P9WQM3,UniRef:UniRef90_P9WQM3
contig_1	Pyrodigal	gene	2245012	2246454	.	+	.	ID=GCA000153685_02115_gene;locus_tag=GCA000153685_02115
contig_1	Pyrodigal	CDS	2245012	2246454	.	+	0	ID=GCA000153685_02115;Name=putative protein Mb2023;locus_tag=GCA000153685_02115;product=putative protein Mb2023;Dbxref=GO:0004497,GO:0005829,GO:0005886,GO:0009274,GO:0050660;Parent=GCA000153685_02115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911749.1,SO:0001217,UniParc:UPI00005EE622,UniRef:UniRef100_P9WLN7,UniRef:UniRef50_P9WLN7,UniRef:UniRef90_P9WLN7
contig_1	Pyrodigal	gene	2246464	2247216	.	+	.	ID=GCA000153685_02116_gene;locus_tag=GCA000153685_02116
contig_1	Pyrodigal	CDS	2246464	2247216	.	+	0	ID=GCA000153685_02116;Name=putative protein Rv2001;locus_tag=GCA000153685_02116;product=putative protein Rv2001;Dbxref=GO:0006633,GO:0047617;Parent=GCA000153685_02116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900448.1,SO:0001217,UniParc:UPI000013B626,UniRef:UniRef100_P9WLN5,UniRef:UniRef50_P9WLN5,UniRef:UniRef90_P9WLN5
contig_1	Pyrodigal	gene	2247292	2248074	.	+	.	ID=GCA000153685_02117_gene;locus_tag=GCA000153685_02117;gene=fabG3
contig_1	Pyrodigal	CDS	2247292	2248074	.	+	0	ID=GCA000153685_02117;Name=3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase;locus_tag=GCA000153685_02117;product=3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase;Dbxref=GO:0005886,GO:0006706,GO:0008202,GO:0016616,GO:0047044;gene=fabG3;Parent=GCA000153685_02117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899124.1,SO:0001217,UniParc:UPI00001650A2,UniRef:UniRef100_P9WGT0,UniRef:UniRef50_P9WGT1,UniRef:UniRef90_P9WGT1;ec_number=1.1.1.53
contig_1	Pyrodigal	gene	2248195	2248884	.	-	.	ID=GCA000153685_02118_gene;locus_tag=GCA000153685_02118
contig_1	Pyrodigal	CDS	2248195	2248884	.	-	0	ID=GCA000153685_02118;Name=putative protein Mb2026c;locus_tag=GCA000153685_02118;product=putative protein Mb2026c;Dbxref=GO:0008757;Parent=GCA000153685_02118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899125.1,SO:0001217,UniParc:UPI00005EE624,UniRef:UniRef100_P9WJZ5,UniRef:UniRef50_P9WJZ5,UniRef:UniRef90_P9WJZ5
contig_1	Pyrodigal	gene	2248892	2249089	.	-	.	ID=GCA000153685_02119_gene;locus_tag=GCA000153685_02119
contig_1	Pyrodigal	CDS	2248892	2249089	.	-	0	ID=GCA000153685_02119;Name=putative protein Rv2003A;locus_tag=GCA000153685_02119;product=putative protein Rv2003A;Dbxref=GO:0003824;Parent=GCA000153685_02119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410051.1,SO:0001217,UniParc:UPI000169A51B,UniRef:UniRef100_P0DMQ7,UniRef:UniRef50_P0DMQ7,UniRef:UniRef90_P0DMQ7
contig_1	Pyrodigal	gene	2249110	2250606	.	-	.	ID=GCA000153685_02120_gene;locus_tag=GCA000153685_02120
contig_1	Pyrodigal	CDS	2249110	2250606	.	-	0	ID=GCA000153685_02120;Name=putative protein Mb2027c;locus_tag=GCA000153685_02120;product=putative protein Mb2027c;Dbxref=GO:0005524;Parent=GCA000153685_02120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07028,RefSeq:WP_003410057.1,SO:0001217,UniParc:UPI000013B62E,UniRef:UniRef100_P9WLN3,UniRef:UniRef50_P9WLN3,UniRef:UniRef90_P9WLN3
contig_1	Pyrodigal	gene	2250628	2251515	.	-	.	ID=GCA000153685_02121_gene;locus_tag=GCA000153685_02121
contig_1	Pyrodigal	CDS	2250628	2251515	.	-	0	ID=GCA000153685_02121;Name=Universal stress protein Mb2028c;locus_tag=GCA000153685_02121;product=Universal stress protein Mb2028c;Dbxref=GO:0005524;Parent=GCA000153685_02121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410060.1,SO:0001217,UniParc:UPI000013B62F,UniRef:UniRef100_P9WLN1,UniRef:UniRef50_P9WLN1,UniRef:UniRef90_P9WLN1
contig_1	Pyrodigal	gene	2251634	2255617	.	+	.	ID=GCA000153685_02122_gene;locus_tag=GCA000153685_02122;gene=otsB
contig_1	Pyrodigal	CDS	2251634	2255617	.	+	0	ID=GCA000153685_02122;Name=trehalose-phosphatase;locus_tag=GCA000153685_02122;product=trehalose-phosphatase;Dbxref=GO:0004553,GO:0004805,GO:0005576,GO:0005886,GO:0005975,GO:0005992,GO:0009274,GO:0016791,GO:0030246;gene=otsB;Parent=GCA000153685_02122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410063.1,SO:0001217,UniParc:UPI000013B630,UniRef:UniRef100_P9WN15,UniRef:UniRef50_P9WN15,UniRef:UniRef90_P9WN15;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	2255716	2256060	.	-	.	ID=GCA000153685_02123_gene;locus_tag=GCA000153685_02123;gene=fdxA
contig_1	Pyrodigal	CDS	2255716	2256060	.	-	0	ID=GCA000153685_02123;Name=ferredoxin;locus_tag=GCA000153685_02123;product=ferredoxin;Dbxref=GO:0001666,GO:0005829,GO:0009055,GO:0046872,GO:0051538,GO:0051539,GO:0052572,GO:0075136;gene=fdxA;Parent=GCA000153685_02123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410065.1,SO:0001217,UniParc:UPI00001650A4,UniRef:UniRef100_P9WNE7,UniRef:UniRef50_P9WNE7,UniRef:UniRef90_P9WNE7
contig_1	Pyrodigal	gene	2256249	2257574	.	-	.	ID=GCA000153685_02124_gene;locus_tag=GCA000153685_02124
contig_1	Pyrodigal	CDS	2256249	2257574	.	-	0	ID=GCA000153685_02124;Name=putative protein Rv2008c;locus_tag=GCA000153685_02124;product=putative protein Rv2008c;Dbxref=GO:0005524;Parent=GCA000153685_02124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07133,RefSeq:WP_003410070.1,SO:0001217,UniParc:UPI000013B633,UniRef:UniRef100_P9WLM9,UniRef:UniRef50_P9WLM9,UniRef:UniRef90_P9WLM9
contig_1	Pyrodigal	gene	2257662	2257904	.	+	.	ID=GCA000153685_02125_gene;locus_tag=GCA000153685_02125;gene=vapB15
contig_1	Pyrodigal	CDS	2257662	2257904	.	+	0	ID=GCA000153685_02125;Name=Antitoxin VapB15;locus_tag=GCA000153685_02125;product=Antitoxin VapB15;Dbxref=GO:0001666,GO:0045927,GO:0046872;gene=vapB15;Parent=GCA000153685_02125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899127.1,SO:0001217,UniParc:UPI000013B634,UniRef:UniRef100_P9WLM7,UniRef:UniRef50_P9WLM7,UniRef:UniRef90_P9WLM7
contig_1	Pyrodigal	gene	2257905	2258303	.	+	.	ID=GCA000153685_02126_gene;locus_tag=GCA000153685_02126;gene=vapC15
contig_1	Pyrodigal	CDS	2257905	2258303	.	+	0	ID=GCA000153685_02126;Name=VapC ribonuclease Mb2033;locus_tag=GCA000153685_02126;product=VapC ribonuclease Mb2033;Dbxref=GO:0000287,GO:0004540;gene=vapC15;Parent=GCA000153685_02126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410075.1,SO:0001217,UniParc:UPI000013B635,UniRef:UniRef100_P9WF97,UniRef:UniRef50_P9WF97,UniRef:UniRef90_P9WF97;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2258486	2258917	.	-	.	ID=GCA000153685_02127_gene;locus_tag=GCA000153685_02127
contig_1	Pyrodigal	CDS	2258486	2258917	.	-	0	ID=GCA000153685_02127;Name=putative protein Rv2011c;locus_tag=GCA000153685_02127;product=putative protein Rv2011c;Dbxref=GO:0003700,GO:0006355,GO:0006950;Parent=GCA000153685_02127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410078.1,SO:0001217,UniParc:UPI000013B638,UniRef:UniRef100_P9WLM5,UniRef:UniRef50_P9WLM5,UniRef:UniRef90_P9WLM5
contig_1	Pyrodigal	gene	2259018	2259452	.	+	.	ID=GCA000153685_02128_gene;locus_tag=GCA000153685_02128
contig_1	Pyrodigal	CDS	2259018	2259452	.	+	0	ID=GCA000153685_02128;Name=putative protein Rv2012;locus_tag=GCA000153685_02128;product=putative protein Rv2012;Parent=GCA000153685_02128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003914358.1,SO:0001217,UniParc:UPI0001E62DB5,UniRef:UniRef100_P9WLM3,UniRef:UniRef50_P9WLM3,UniRef:UniRef90_P9WLM3
contig_1	Pyrodigal	gene	2260156	2260776	.	+	.	ID=GCA000153685_02129_gene;locus_tag=GCA000153685_02129
contig_1	Pyrodigal	CDS	2260156	2260776	.	+	0	ID=GCA000153685_02129;Name=putative transposase;locus_tag=GCA000153685_02129;product=putative transposase;Parent=GCA000153685_02129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410086.1,SO:0001217,UniParc:UPI00000D2C82,UniRef:UniRef100_A0A1R3XZY3,UniRef:UniRef50_A0A0H3M575,UniRef:UniRef90_A0A0H3M575
contig_1	Pyrodigal	gene	2260730	2261320	.	+	.	ID=GCA000153685_02130_gene;locus_tag=GCA000153685_02130
contig_1	Pyrodigal	CDS	2260730	2261320	.	+	0	ID=GCA000153685_02130;Name=Transposase;locus_tag=GCA000153685_02130;product=Transposase;Parent=GCA000153685_02130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899131.1,SO:0001217,UniParc:UPI00000D2C83,UniRef:UniRef100_Q10843,UniRef:UniRef50_R4M9I9,UniRef:UniRef90_Q10843
contig_1	Pyrodigal	gene	2261448	2262704	.	-	.	ID=GCA000153685_02131_gene;locus_tag=GCA000153685_02131
contig_1	Pyrodigal	CDS	2261448	2262704	.	-	0	ID=GCA000153685_02131;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_02131;product=HNH nuclease domain-containing protein;Parent=GCA000153685_02131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410095.1,SO:0001217,UniParc:UPI0000165079,UniRef:UniRef100_O53461,UniRef:UniRef50_O53461,UniRef:UniRef90_O53461
contig_1	Pyrodigal	gene	2263022	2263633	.	+	.	ID=GCA000153685_02132_gene;locus_tag=GCA000153685_02132
contig_1	Pyrodigal	CDS	2263022	2263633	.	+	0	ID=GCA000153685_02132;Name=hypothetical protein;locus_tag=GCA000153685_02132;product=hypothetical protein;Parent=GCA000153685_02132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F627A,UniRef:UniRef100_Q8VJS2,UniRef:UniRef50_A0A8A1VF64,UniRef:UniRef90_O53462
contig_1	Pyrodigal	gene	2263630	2264670	.	+	.	ID=GCA000153685_02133_gene;locus_tag=GCA000153685_02133
contig_1	Pyrodigal	CDS	2263630	2264670	.	+	0	ID=GCA000153685_02133;Name=DNA-binding protein;locus_tag=GCA000153685_02133;product=DNA-binding protein;Parent=GCA000153685_02133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410103.1,SO:0001217,UniParc:UPI00001650A6,UniRef:UniRef100_A0A1R3Y0C4,UniRef:UniRef50_A0A7I7LIB9,UniRef:UniRef90_R4M6S6
contig_1	Pyrodigal	gene	2264912	2265631	.	+	.	ID=GCA000153685_02134_gene;locus_tag=GCA000153685_02134;gene=vapB45
contig_1	Pyrodigal	CDS	2264912	2265631	.	+	0	ID=GCA000153685_02134;Name=Putative antitoxin VapB45;locus_tag=GCA000153685_02134;product=Putative antitoxin VapB45;gene=vapB45;Parent=GCA000153685_02134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410108.1,SO:0001217,UniParc:UPI00001652C0,UniRef:UniRef100_O53464,UniRef:UniRef50_O53464,UniRef:UniRef90_O53464
contig_1	Pyrodigal	gene	2265687	2266037	.	+	.	ID=GCA000153685_02135_gene;locus_tag=GCA000153685_02135
contig_1	Pyrodigal	CDS	2265687	2266037	.	+	0	ID=GCA000153685_02135;Name=VapC45 PIN like domain-containing protein;locus_tag=GCA000153685_02135;product=VapC45 PIN like domain-containing protein;Parent=GCA000153685_02135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015456B5,UniRef:UniRef100_A0A0H3LBB3,UniRef:UniRef50_O53465,UniRef:UniRef90_A0A0H3LBB3
contig_1	Pyrodigal	gene	2266053	2266340	.	-	.	ID=GCA000153685_02136_gene;locus_tag=GCA000153685_02136
contig_1	Pyrodigal	CDS	2266053	2266340	.	-	0	ID=GCA000153685_02136;Name=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;locus_tag=GCA000153685_02136;product=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;Parent=GCA000153685_02136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE62C,UniRef:UniRef100_O53466,UniRef:UniRef50_O53466,UniRef:UniRef90_O53466
contig_1	Pyrodigal	gene	2266437	2266742	.	-	.	ID=GCA000153685_02137_gene;locus_tag=GCA000153685_02137;gene=higA2
contig_1	Pyrodigal	CDS	2266437	2266742	.	-	0	ID=GCA000153685_02137;Name=Putative antitoxin HigA2;locus_tag=GCA000153685_02137;product=Putative antitoxin HigA2;Dbxref=GO:0003677;gene=higA2;Parent=GCA000153685_02137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410124.1,SO:0001217,UniParc:UPI00000D5FB7,UniRef:UniRef100_O53467,UniRef:UniRef50_O53467,UniRef:UniRef90_O53467
contig_1	Pyrodigal	gene	2266751	2267356	.	-	.	ID=GCA000153685_02138_gene;locus_tag=GCA000153685_02138;gene=higB2
contig_1	Pyrodigal	CDS	2266751	2267356	.	-	0	ID=GCA000153685_02138;Name=Putative toxin HigB2;locus_tag=GCA000153685_02138;product=Putative toxin HigB2;gene=higB2;Parent=GCA000153685_02138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900449.1,SO:0001217,UniParc:UPI00000D0FCF,UniRef:UniRef100_O53468,UniRef:UniRef50_O53468,UniRef:UniRef90_O53468
contig_1	Pyrodigal	gene	2267381	2267800	.	-	.	ID=GCA000153685_02139_gene;locus_tag=GCA000153685_02139
contig_1	Pyrodigal	CDS	2267381	2267800	.	-	0	ID=GCA000153685_02139;Name=Transposase;locus_tag=GCA000153685_02139;product=Transposase;Parent=GCA000153685_02139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003078BDE,UniRef:UniRef100_A0A0E7YVR9,UniRef:UniRef50_A0A0U0QR31,UniRef:UniRef90_R4M809
contig_1	Pyrodigal	gene	2267900	2268532	.	-	.	ID=GCA000153685_02140_gene;locus_tag=GCA000153685_02140
contig_1	Pyrodigal	CDS	2267900	2268532	.	-	0	ID=GCA000153685_02140;Name=hypothetical protein;locus_tag=GCA000153685_02140;product=hypothetical protein;Parent=GCA000153685_02140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913310.1,SO:0001217,UniParc:UPI0001E621EB,UniRef:UniRef100_A0A1R3Y244,UniRef:UniRef50_A0A1R3Y244,UniRef:UniRef90_A0A1R3Y244
contig_1	Pyrodigal	gene	2268529	2268765	.	-	.	ID=GCA000153685_02141_gene;locus_tag=GCA000153685_02141
contig_1	Pyrodigal	CDS	2268529	2268765	.	-	0	ID=GCA000153685_02141;Name=Transposase;locus_tag=GCA000153685_02141;product=Transposase;Parent=GCA000153685_02141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410133.1,SO:0001217,UniParc:UPI00000D2C87,UniRef:UniRef100_A0A0H3LBB9,UniRef:UniRef50_A0A0H3LBB9,UniRef:UniRef90_A0A0H3LBB9
contig_1	Infernal	gene	2268803	2268872	.	+	.	ID=GCA000153685_02142_gene;locus_tag=GCA000153685_02142;gene=Ms_AS-8
contig_1	Infernal	ncRNA	2268803	2268872	1.4e-08	+	.	ID=GCA000153685_02142;Name=Actinobacteria sRNA Ms_AS-8;locus_tag=GCA000153685_02142;product=Actinobacteria sRNA Ms_AS-8;Dbxref=RFAM:RF02466;Parent=GCA000153685_02142_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02466
contig_1	Pyrodigal	gene	2268972	2269868	.	-	.	ID=GCA000153685_02143_gene;locus_tag=GCA000153685_02143
contig_1	Pyrodigal	CDS	2268972	2269868	.	-	0	ID=GCA000153685_02143;Name=hypothetical protein;locus_tag=GCA000153685_02143;product=hypothetical protein;Parent=GCA000153685_02143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410136.1,SO:0001217,UniParc:UPI00001A908B,UniRef:UniRef100_A0A1R3Y0R8,UniRef:UniRef50_A0A557Y1A3,UniRef:UniRef90_Q8VJR8
contig_1	Pyrodigal	gene	2270052	2274872	.	-	.	ID=GCA000153685_02144_gene;locus_tag=GCA000153685_02144
contig_1	Pyrodigal	CDS	2270052	2274872	.	-	0	ID=GCA000153685_02144;Name=Helicase ATP-binding domain-containing protein;locus_tag=GCA000153685_02144;product=Helicase ATP-binding domain-containing protein;Parent=GCA000153685_02144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900451.1,SO:0001217,UniParc:UPI00000D2B15,UniRef:UniRef100_A0A0H3LA61,UniRef:UniRef50_A0A2N9JEL8,UniRef:UniRef90_A0A0H3LA61
contig_1	Pyrodigal	gene	2275382	2276341	.	-	.	ID=GCA000153685_02145_gene;locus_tag=GCA000153685_02145
contig_1	Pyrodigal	CDS	2275382	2276341	.	-	0	ID=GCA000153685_02145;Name=putative cation efflux system protein Rv2025c;locus_tag=GCA000153685_02145;product=putative cation efflux system protein Rv2025c;Dbxref=GO:0005886,GO:0006882,GO:0015086,GO:0015093,GO:0015341;Parent=GCA000153685_02145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002178886,UniRef:UniRef100_P9WGF5,UniRef:UniRef50_P9WGF5,UniRef:UniRef90_P9WGF5
contig_1	Pyrodigal	gene	2276495	2277379	.	-	.	ID=GCA000153685_02146_gene;locus_tag=GCA000153685_02146
contig_1	Pyrodigal	CDS	2276495	2277379	.	-	0	ID=GCA000153685_02146;Name=Universal stress protein Rv2026c;locus_tag=GCA000153685_02146;product=Universal stress protein Rv2026c;Dbxref=GO:0005524;Parent=GCA000153685_02146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410150.1,SO:0001217,UniParc:UPI00000D6040,UniRef:UniRef100_P9WFD1,UniRef:UniRef50_P9WFD1,UniRef:UniRef90_P9WFD1
contig_1	Pyrodigal	gene	2277419	2279140	.	-	.	ID=GCA000153685_02147_gene;locus_tag=GCA000153685_02147;gene=dosT
contig_1	Pyrodigal	CDS	2277419	2279140	.	-	0	ID=GCA000153685_02147;Name=two-component system sensor histidine kinase DosT;locus_tag=GCA000153685_02147;product=two-component system sensor histidine kinase DosT;Dbxref=GO:0000155,GO:0000287,GO:0004672,GO:0004673,GO:0005509,GO:0005524,GO:0005737,GO:0016020,GO:0019825,GO:0019826,GO:0020037,GO:0046983,GO:0070025,GO:0070026,GO:0070483;gene=dosT;Parent=GCA000153685_02147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899138,RefSeq:WP_003899138.1,SO:0001217,UniParc:UPI00000D5F45,UniRef:UniRef100_P9WGK1,UniRef:UniRef50_P9WGK1,UniRef:UniRef90_P9WGK1;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2279201	2280040	.	-	.	ID=GCA000153685_02148_gene;locus_tag=GCA000153685_02148
contig_1	Pyrodigal	CDS	2279201	2280040	.	-	0	ID=GCA000153685_02148;Name=Universal stress protein Rv2028c;locus_tag=GCA000153685_02148;product=Universal stress protein Rv2028c;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_02148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410171.1,SO:0001217,UniParc:UPI00000D5EDC,UniRef:UniRef100_P9WFD9,UniRef:UniRef50_P9WFD9,UniRef:UniRef90_P9WFD9
contig_1	Pyrodigal	gene	2280037	2281056	.	-	.	ID=GCA000153685_02149_gene;locus_tag=GCA000153685_02149;gene=pfkB
contig_1	Pyrodigal	CDS	2280037	2281056	.	-	0	ID=GCA000153685_02149;Name=ATP-dependent 6-phosphofructokinase isozyme 2;locus_tag=GCA000153685_02149;product=ATP-dependent 6-phosphofructokinase isozyme 2;Dbxref=GO:0003872,GO:0005524,GO:0005829,GO:0009024,GO:0046872;gene=pfkB;Parent=GCA000153685_02149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16370,RefSeq:WP_003899139.1,SO:0001217,UniParc:UPI00000D1173,UniRef:UniRef100_P9WID3,UniRef:UniRef50_P9WID3,UniRef:UniRef90_P9WID3;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	2281073	2283112	.	-	.	ID=GCA000153685_02150_gene;locus_tag=GCA000153685_02150
contig_1	Pyrodigal	CDS	2281073	2283112	.	-	0	ID=GCA000153685_02150;Name=putative protein Rv2030c;locus_tag=GCA000153685_02150;product=putative protein Rv2030c;Dbxref=GO:0005829,GO:0005886,GO:0009274,GO:0016740,GO:0046677;Parent=GCA000153685_02150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06880,SO:0001217,UniParc:UPI00030E6119,UniRef:UniRef100_A0A0E9A7P7,UniRef:UniRef50_P9WLM1,UniRef:UniRef90_P9WLM1;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2283130	2283564	.	-	.	ID=GCA000153685_02151_gene;locus_tag=GCA000153685_02151;gene=hspX
contig_1	Pyrodigal	CDS	2283130	2283564	.	-	0	ID=GCA000153685_02151;Name=alpha-crystallin HspX;locus_tag=GCA000153685_02151;product=alpha-crystallin HspX;Dbxref=GO:0001666,GO:0005576,GO:0005829,GO:0005886,GO:0006457,GO:0009267,GO:0009274,GO:0009408,GO:0009651,GO:0010039,GO:0042542,GO:0044183,GO:0045926,GO:0051082,GO:0051259,GO:0051409,GO:0052572,GO:0071456,GO:0075136;gene=hspX;Parent=GCA000153685_02151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410189,RefSeq:WP_003410189.1,SO:0001217,UniParc:UPI000004A4BF,UniRef:UniRef100_P9WMK1,UniRef:UniRef50_P9WMK1,UniRef:UniRef90_P9WMK1
contig_1	Pyrodigal	gene	2283761	2284756	.	+	.	ID=GCA000153685_02152_gene;locus_tag=GCA000153685_02152;gene=acg
contig_1	Pyrodigal	CDS	2283761	2284756	.	+	0	ID=GCA000153685_02152;Name=FMN-binding protein Acg;locus_tag=GCA000153685_02152;product=FMN-binding protein Acg;Dbxref=GO:0001666,GO:0005829,GO:0005886,GO:0009274,GO:0016491,GO:0052572;gene=acg;Parent=GCA000153685_02152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410193,RefSeq:WP_003410193.1,SO:0001217,UniParc:UPI00001652C1,UniRef:UniRef100_P9WIZ9,UniRef:UniRef50_P9WIZ9,UniRef:UniRef90_P9WIZ9;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2284872	2285630	.	-	.	ID=GCA000153685_02153_gene;locus_tag=GCA000153685_02153
contig_1	Pyrodigal	CDS	2284872	2285630	.	-	0	ID=GCA000153685_02153;Name=DUF3097 domain-containing protein;locus_tag=GCA000153685_02153;product=DUF3097 domain-containing protein;Parent=GCA000153685_02153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005E605F4,UniRef:UniRef100_O53477,UniRef:UniRef50_C7R529,UniRef:UniRef90_O53477
contig_1	Pyrodigal	gene	2285926	2286249	.	+	.	ID=GCA000153685_02154_gene;locus_tag=GCA000153685_02154
contig_1	Pyrodigal	CDS	2285926	2286249	.	+	0	ID=GCA000153685_02154;Name=HTH-type transcriptional regulator Rv2034;locus_tag=GCA000153685_02154;product=HTH-type transcriptional regulator Rv2034;Dbxref=GO:0003677,GO:0003700,GO:0006355;Parent=GCA000153685_02154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410200.1,SO:0001217,UniParc:UPI00001652C2,UniRef:UniRef100_O53478,UniRef:UniRef50_O53478,UniRef:UniRef90_O53478
contig_1	Pyrodigal	gene	2286246	2286734	.	+	.	ID=GCA000153685_02155_gene;locus_tag=GCA000153685_02155
contig_1	Pyrodigal	CDS	2286246	2286734	.	+	0	ID=GCA000153685_02155;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000153685_02155;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;Parent=GCA000153685_02155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899141.1,SO:0001217,UniParc:UPI00000D102C,UniRef:UniRef100_O53479,UniRef:UniRef50_O53479,UniRef:UniRef90_O53479
contig_1	Pyrodigal	gene	2286731	2287372	.	+	.	ID=GCA000153685_02156_gene;locus_tag=GCA000153685_02156
contig_1	Pyrodigal	CDS	2286731	2287372	.	+	0	ID=GCA000153685_02156;Name=Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein;locus_tag=GCA000153685_02156;product=Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein;Parent=GCA000153685_02156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899142.1,SO:0001217,UniParc:UPI00001652C3,UniRef:UniRef100_O53480,UniRef:UniRef50_O53480,UniRef:UniRef90_O53480
contig_1	Pyrodigal	gene	2287379	2288353	.	-	.	ID=GCA000153685_02157_gene;locus_tag=GCA000153685_02157
contig_1	Pyrodigal	CDS	2287379	2288353	.	-	0	ID=GCA000153685_02157;Name=PNPLA domain-containing protein;locus_tag=GCA000153685_02157;product=PNPLA domain-containing protein;Parent=GCA000153685_02157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410214.1,SO:0001217,UniParc:UPI00001650A7,UniRef:UniRef100_A0A1R3Y031,UniRef:UniRef50_A0A1E3SPN7,UniRef:UniRef90_A0A1X2LUF2
contig_1	Pyrodigal	gene	2288355	2289428	.	-	.	ID=GCA000153685_02158_gene;locus_tag=GCA000153685_02158;gene=ugpC
contig_1	Pyrodigal	CDS	2288355	2289428	.	-	0	ID=GCA000153685_02158;Name=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;locus_tag=GCA000153685_02158;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;gene=ugpC;Parent=GCA000153685_02158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410218.1,SO:0001217,UniParc:UPI000004B731,UniRef:UniRef100_A5U463,UniRef:UniRef50_A0A498Q131,UniRef:UniRef90_A0A8I0ENT7
contig_1	Pyrodigal	gene	2289431	2290273	.	-	.	ID=GCA000153685_02159_gene;locus_tag=GCA000153685_02159
contig_1	Pyrodigal	CDS	2289431	2290273	.	-	0	ID=GCA000153685_02159;Name=Sugar-transport integral membrane protein ABCtransporter;locus_tag=GCA000153685_02159;product=Sugar-transport integral membrane protein ABCtransporter;Parent=GCA000153685_02159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410221.1,SO:0001217,UniParc:UPI00001650A8,UniRef:UniRef100_A0A0H3LBD9,UniRef:UniRef50_Q73Z36,UniRef:UniRef90_A0A0H3LBD9
contig_1	Pyrodigal	gene	2290260	2291162	.	-	.	ID=GCA000153685_02160_gene;locus_tag=GCA000153685_02160
contig_1	Pyrodigal	CDS	2290260	2291162	.	-	0	ID=GCA000153685_02160;Name=Sugar ABC transporter permease protein;locus_tag=GCA000153685_02160;product=Sugar ABC transporter permease protein;Parent=GCA000153685_02160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410224.1,SO:0001217,UniParc:UPI000004B733,UniRef:UniRef100_A5U465,UniRef:UniRef50_A0A081HXA7,UniRef:UniRef90_A5U465
contig_1	Pyrodigal	gene	2291159	2292478	.	-	.	ID=GCA000153685_02161_gene;locus_tag=GCA000153685_02161
contig_1	Pyrodigal	CDS	2291159	2292478	.	-	0	ID=GCA000153685_02161;Name=Sugar-binding lipoprotein;locus_tag=GCA000153685_02161;product=Sugar-binding lipoprotein;Parent=GCA000153685_02161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410228.1,SO:0001217,UniParc:UPI000004B734,UniRef:UniRef100_A5U466,UniRef:UniRef50_A0A7K0D4K7,UniRef:UniRef90_A5U466
contig_1	Pyrodigal	gene	2292516	2293313	.	-	.	ID=GCA000153685_02162_gene;locus_tag=GCA000153685_02162
contig_1	Pyrodigal	CDS	2292516	2293313	.	-	0	ID=GCA000153685_02162;Name=Conserved protein;locus_tag=GCA000153685_02162;product=Conserved protein;Parent=GCA000153685_02162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899143.1,SO:0001217,UniParc:UPI000004B735,UniRef:UniRef100_O53486,UniRef:UniRef50_F5YSU1,UniRef:UniRef90_O53486
contig_1	Pyrodigal	gene	2293313	2293873	.	-	.	ID=GCA000153685_02163_gene;locus_tag=GCA000153685_02163;gene=pncA
contig_1	Pyrodigal	CDS	2293313	2293873	.	-	0	ID=GCA000153685_02163;Name=pyrazinamidase PncA;locus_tag=GCA000153685_02163;product=pyrazinamidase PncA;Dbxref=GO:0006769,GO:0006805,GO:0008198,GO:0008936,GO:0019363,GO:0030145,GO:0046677;gene=pncA;Parent=GCA000153685_02163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_153298983,BlastRules:WP_153298984,KEGG:K08281,RefSeq:WP_003410243.1,SO:0001217,UniParc:UPI000004B736,UniRef:UniRef100_I6XD65,UniRef:UniRef50_I6XD65,UniRef:UniRef90_I6XD65;ec_number=3.5.1.19
contig_1	Pyrodigal	gene	2293914	2294264	.	-	.	ID=GCA000153685_02164_gene;locus_tag=GCA000153685_02164
contig_1	Pyrodigal	CDS	2293914	2294264	.	-	0	ID=GCA000153685_02164;Name=DUF2784 domain-containing protein;locus_tag=GCA000153685_02164;product=DUF2784 domain-containing protein;Parent=GCA000153685_02164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902241.1,SO:0001217,UniParc:UPI00015456B6,UniRef:UniRef100_O53487,UniRef:UniRef50_O53487,UniRef:UniRef90_O53487
contig_1	Pyrodigal	gene	2294317	2295822	.	-	.	ID=GCA000153685_02165_gene;locus_tag=GCA000153685_02165
contig_1	Pyrodigal	CDS	2294317	2295822	.	-	0	ID=GCA000153685_02165;Name=Carboxylic ester hydrolase;locus_tag=GCA000153685_02165;product=Carboxylic ester hydrolase;Parent=GCA000153685_02165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003916923.1,SO:0001217,UniParc:UPI00001650A9,UniRef:UniRef100_O53488,UniRef:UniRef50_A0A9X2YWI8,UniRef:UniRef90_O53488
contig_1	Pyrodigal	gene	2295901	2296557	.	+	.	ID=GCA000153685_02166_gene;locus_tag=GCA000153685_02166;gene=lppI
contig_1	Pyrodigal	CDS	2295901	2296557	.	+	0	ID=GCA000153685_02166;Name=Lipoprotein LppI;locus_tag=GCA000153685_02166;product=Lipoprotein LppI;gene=lppI;Parent=GCA000153685_02166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899146.1,SO:0001217,UniParc:UPI00000D600D,UniRef:UniRef100_A5U471,UniRef:UniRef50_A0A7I7Q211,UniRef:UniRef90_A0A8I0ENZ9
contig_1	Pyrodigal	gene	2296594	2299158	.	-	.	ID=GCA000153685_02167_gene;locus_tag=GCA000153685_02167
contig_1	Pyrodigal	CDS	2296594	2299158	.	-	0	ID=GCA000153685_02167;Name=sugar epimerase family protein;locus_tag=GCA000153685_02167;product=sugar epimerase family protein;Dbxref=GO:0009274,GO:0016772;Parent=GCA000153685_02167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410309.1,SO:0001217,UniParc:UPI000013B659,UniRef:UniRef100_P9WIH5,UniRef:UniRef50_P9WIH5,UniRef:UniRef90_P9WIH5
contig_1	Pyrodigal	gene	2299163	2311618	.	-	.	ID=GCA000153685_02168_gene;locus_tag=GCA000153685_02168;gene=pks2
contig_1	Pyrodigal	CDS	2299163	2311618	.	-	0	ID=GCA000153685_02168;Name=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;locus_tag=GCA000153685_02168;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;Dbxref=GO:0004312,GO:0004315,GO:0006633,GO:0016491,GO:0031177,GO:0042802;gene=pks2;Parent=GCA000153685_02168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036387.1,SO:0001217,UniParc:UPI0003AB4A82,UniRef:UniRef100_A0AA44LPI7,UniRef:UniRef50_I6XD69,UniRef:UniRef90_I6XD69;ec_number=2.3.1.295
contig_1	Infernal	gene	2304428	2304505	.	+	.	ID=GCA000153685_02169_gene;locus_tag=GCA000153685_02169;gene=ASpks
contig_1	Infernal	ncRNA	2304428	2304505	6.6e-12	+	.	ID=GCA000153685_02169;Name=ASpks TB sRNA;locus_tag=GCA000153685_02169;product=ASpks TB sRNA;Dbxref=RFAM:RF01782;Parent=GCA000153685_02169_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01782
contig_1	Infernal	gene	2310497	2310574	.	+	.	ID=GCA000153685_02170_gene;locus_tag=GCA000153685_02170;gene=ASpks
contig_1	Infernal	ncRNA	2310497	2310574	6.6e-12	+	.	ID=GCA000153685_02170;Name=ASpks TB sRNA;locus_tag=GCA000153685_02170;product=ASpks TB sRNA;Dbxref=RFAM:RF01782;Parent=GCA000153685_02170_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01782
contig_1	Pyrodigal	gene	2311925	2312149	.	-	.	ID=GCA000153685_02171_gene;locus_tag=GCA000153685_02171
contig_1	Pyrodigal	CDS	2311925	2312149	.	-	0	ID=GCA000153685_02171;Name=FCS-type domain-containing protein;locus_tag=GCA000153685_02171;product=FCS-type domain-containing protein;Parent=GCA000153685_02171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410590.1,SO:0001217,UniParc:UPI00000C153D,UniRef:UniRef100_O53491,UniRef:UniRef50_A0A1A3BPZ7,UniRef:UniRef90_O53491
contig_1	Pyrodigal	gene	2312453	2312788	.	+	.	ID=GCA000153685_02172_gene;locus_tag=GCA000153685_02172;gene=rbpA
contig_1	Pyrodigal	CDS	2312453	2312788	.	+	0	ID=GCA000153685_02172;Name=RNA polymerase-binding protein RbpA;locus_tag=GCA000153685_02172;product=RNA polymerase-binding protein RbpA;Dbxref=GO:0001000,GO:0001108,GO:0003676,GO:0009274,GO:0045893;gene=rbpA;Parent=GCA000153685_02172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410601,BlastRules:WP_003895305,RefSeq:WP_003410601.1,SO:0001217,UniParc:UPI00000317B5,UniRef:UniRef100_P9WHJ5,UniRef:UniRef50_P9WHJ5,UniRef:UniRef90_P9WHJ5
contig_1	Pyrodigal	gene	2312763	2315552	.	-	.	ID=GCA000153685_02173_gene;locus_tag=GCA000153685_02173;gene=lnt
contig_1	Pyrodigal	CDS	2312763	2315552	.	-	0	ID=GCA000153685_02173;Name=apolipoprotein N-acyltransferase;locus_tag=GCA000153685_02173;product=apolipoprotein N-acyltransferase;Dbxref=GO:0004582,GO:0005829,GO:0005886,GO:0009247,GO:0009274,GO:0016020,GO:0016410,GO:0016787,GO:0042158,GO:0052167;gene=lnt;Parent=GCA000153685_02173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03820,SO:0001217,UniParc:UPI00005EE639,UniRef:UniRef100_A0A0H3LAA3,UniRef:UniRef50_O53493,UniRef:UniRef90_O53493;ec_number=2.3.1.269
contig_1	Pyrodigal	gene	2315545	2317149	.	-	.	ID=GCA000153685_02174_gene;locus_tag=GCA000153685_02174
contig_1	Pyrodigal	CDS	2315545	2317149	.	-	0	ID=GCA000153685_02174;Name=Conserved protein;locus_tag=GCA000153685_02174;product=Conserved protein;Parent=GCA000153685_02174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410605.1,SO:0001217,UniParc:UPI00000CCB79,UniRef:UniRef100_O53494,UniRef:UniRef50_O53494,UniRef:UniRef90_O53494
contig_1	Pyrodigal	gene	2317154	2317684	.	-	.	ID=GCA000153685_02175_gene;locus_tag=GCA000153685_02175;gene=fxsA
contig_1	Pyrodigal	CDS	2317154	2317684	.	-	0	ID=GCA000153685_02175;Name=Membrane protein FxsA;locus_tag=GCA000153685_02175;product=Membrane protein FxsA;gene=fxsA;Parent=GCA000153685_02175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07113,SO:0001217,UniParc:UPI00005EE63A,UniRef:UniRef100_A0A0H3LEM2,UniRef:UniRef50_A0A1E3SBM3,UniRef:UniRef90_A5U478
contig_1	Pyrodigal	gene	2317757	2318470	.	+	.	ID=GCA000153685_02176_gene;locus_tag=GCA000153685_02176
contig_1	Pyrodigal	CDS	2317757	2318470	.	+	0	ID=GCA000153685_02176;Name=Conserved protein;locus_tag=GCA000153685_02176;product=Conserved protein;Parent=GCA000153685_02176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410610.1,SO:0001217,UniParc:UPI00000D5E14,UniRef:UniRef100_O86353,UniRef:UniRef50_O86353,UniRef:UniRef90_O86353
contig_1	Pyrodigal	gene	2318719	2318985	.	-	.	ID=GCA000153685_02177_gene;locus_tag=GCA000153685_02177;gene=rpsR
contig_1	Pyrodigal	CDS	2318719	2318985	.	-	0	ID=GCA000153685_02177;Name=30S ribosomal protein S18;locus_tag=GCA000153685_02177;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000153685_02177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410619.1,SO:0001217,UniParc:UPI0000132F38,UniRef:UniRef100_P9WH47,UniRef:UniRef50_P9WH47,UniRef:UniRef90_P9WH47
contig_1	Pyrodigal	gene	2318986	2319291	.	-	.	ID=GCA000153685_02178_gene;locus_tag=GCA000153685_02178;gene=rpsN
contig_1	Pyrodigal	CDS	2318986	2319291	.	-	0	ID=GCA000153685_02178;Name=30S ribosomal protein S14;locus_tag=GCA000153685_02178;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0009274,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000153685_02178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02954,RefSeq:WP_003410624.1,SO:0001217,UniParc:UPI0000132EF1,UniRef:UniRef100_P9WH59,UniRef:UniRef50_P9WH59,UniRef:UniRef90_P9WH59
contig_1	Pyrodigal	gene	2319293	2319457	.	-	.	ID=GCA000153685_02179_gene;locus_tag=GCA000153685_02179;gene=rpmG
contig_1	Pyrodigal	CDS	2319293	2319457	.	-	0	ID=GCA000153685_02179;Name=50S ribosomal protein L33;locus_tag=GCA000153685_02179;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmG;Parent=GCA000153685_02179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02913,RefSeq:WP_003410628.1,SO:0001217,UniParc:UPI0000132FBC,UniRef:UniRef100_P9WH97,UniRef:UniRef50_A5US14,UniRef:UniRef90_P9WH97
contig_1	Pyrodigal	gene	2319457	2319693	.	-	.	ID=GCA000153685_02180_gene;locus_tag=GCA000153685_02180;gene=rpmB
contig_1	Pyrodigal	CDS	2319457	2319693	.	-	0	ID=GCA000153685_02180;Name=50S ribosomal protein L28;locus_tag=GCA000153685_02180;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000153685_02180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410631.1,SO:0001217,UniParc:UPI0000132F96,UniRef:UniRef100_P9WHA9,UniRef:UniRef50_P9WHB1,UniRef:UniRef90_P9WHA9
contig_1	Pyrodigal	gene	2319908	2320543	.	-	.	ID=GCA000153685_02181_gene;locus_tag=GCA000153685_02181
contig_1	Pyrodigal	CDS	2319908	2320543	.	-	0	ID=GCA000153685_02181;Name=hypothetical protein;locus_tag=GCA000153685_02181;product=hypothetical protein;Parent=GCA000153685_02181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A76420,UniRef:UniRef100_A0A0E7U1Q6,UniRef:UniRef50_A0A655JC68,UniRef:UniRef90_A0A655JC68
contig_1	Pyrodigal	gene	2320911	2321312	.	+	.	ID=GCA000153685_02182_gene;locus_tag=GCA000153685_02182
contig_1	Pyrodigal	CDS	2320911	2321312	.	+	0	ID=GCA000153685_02182;Name=Integral membrane protein;locus_tag=GCA000153685_02182;product=Integral membrane protein;Parent=GCA000153685_02182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009937711.1,SO:0001217,UniParc:UPI00000C1599,UniRef:UniRef100_O86339,UniRef:UniRef50_A0A519H5B2,UniRef:UniRef90_R4LW68
contig_1	Pyrodigal	gene	2321313	2321717	.	-	.	ID=GCA000153685_02183_gene;locus_tag=GCA000153685_02183
contig_1	Pyrodigal	CDS	2321313	2321717	.	-	0	ID=GCA000153685_02183;Name=Conserved protein;locus_tag=GCA000153685_02183;product=Conserved protein;Parent=GCA000153685_02183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410645.1,SO:0001217,UniParc:UPI00001652C5,UniRef:UniRef100_O86340,UniRef:UniRef50_O86340,UniRef:UniRef90_O86340
contig_1	Pyrodigal	gene	2321801	2325385	.	-	.	ID=GCA000153685_02184_gene;locus_tag=GCA000153685_02184;gene=cobN
contig_1	Pyrodigal	CDS	2321801	2325385	.	-	0	ID=GCA000153685_02184;Name=cobaltochelatase subunit CobN;locus_tag=GCA000153685_02184;product=cobaltochelatase subunit CobN;Dbxref=GO:0009236,GO:0051116;gene=cobN;Parent=GCA000153685_02184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02230,RefSeq:WP_003410648.1,SO:0001217,UniParc:UPI00001652C6,UniRef:UniRef100_O53498,UniRef:UniRef50_A0A1Y2N7M5,UniRef:UniRef90_O53498;ec_number=6.6.1.2
contig_1	Pyrodigal	gene	2325544	2325696	.	+	.	ID=GCA000153685_02185_gene;locus_tag=GCA000153685_02185;gene=mazE7
contig_1	Pyrodigal	CDS	2325544	2325696	.	+	0	ID=GCA000153685_02185;Name=Antitoxin MazE7;locus_tag=GCA000153685_02185;product=Antitoxin MazE7;Dbxref=GO:0003677,GO:0045927,GO:0098754;gene=mazE7;Parent=GCA000153685_02185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE63C,UniRef:UniRef100_P9WJ85,UniRef:UniRef50_P9WJ85,UniRef:UniRef90_P9WJ85
contig_1	Pyrodigal	gene	2326083	2327174	.	+	.	ID=GCA000153685_02186_gene;locus_tag=GCA000153685_02186;gene=cobG
contig_1	Pyrodigal	CDS	2326083	2327174	.	+	0	ID=GCA000153685_02186;Name=precorrin-3B synthase;locus_tag=GCA000153685_02186;product=precorrin-3B synthase;Dbxref=GO:0016709,GO:0019250;gene=cobG;Parent=GCA000153685_02186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02229,RefSeq:WP_003900454.1,SO:0001217,UniParc:UPI00000D5EB5,UniRef:UniRef100_Q10675,UniRef:UniRef50_A0A846WM83,UniRef:UniRef90_Q10675;ec_number=1.14.13.83
contig_1	Pyrodigal	gene	2327184	2327810	.	+	.	ID=GCA000153685_02187_gene;locus_tag=GCA000153685_02187;gene=cobH
contig_1	Pyrodigal	CDS	2327184	2327810	.	+	0	ID=GCA000153685_02187;Name=precorrin-8X methylmutase;locus_tag=GCA000153685_02187;product=precorrin-8X methylmutase;Dbxref=GO:0009236,GO:0016993;gene=cobH;Parent=GCA000153685_02187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06042,RefSeq:WP_003410658.1,SO:0001217,UniParc:UPI0000127DE1,UniRef:UniRef100_P9WP87,UniRef:UniRef50_P9WP87,UniRef:UniRef90_P9WP87;ec_number=5.4.99.61
contig_1	Pyrodigal	gene	2327807	2329333	.	+	.	ID=GCA000153685_02188_gene;locus_tag=GCA000153685_02188;gene=cobIJ
contig_1	Pyrodigal	CDS	2327807	2329333	.	+	0	ID=GCA000153685_02188;Name=precorrin-2 C(20)-methyltransferase;locus_tag=GCA000153685_02188;product=precorrin-2 C(20)-methyltransferase;Dbxref=GO:0005886,GO:0009236,GO:0030788,GO:0030789,GO:0032259;gene=cobIJ;Parent=GCA000153685_02188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410659.1,SO:0001217,UniParc:UPI0000127DE3,UniRef:UniRef100_P9WGB3,UniRef:UniRef50_P9WGB3,UniRef:UniRef90_P9WGB3;ec_number=2.1.1.130
contig_1	Pyrodigal	gene	2329279	2330502	.	-	.	ID=GCA000153685_02189_gene;locus_tag=GCA000153685_02189
contig_1	Pyrodigal	CDS	2329279	2330502	.	-	0	ID=GCA000153685_02189;Name=putative protein Mb2093c;locus_tag=GCA000153685_02189;product=putative protein Mb2093c;Dbxref=GO:0005886,GO:0008168,GO:0009274;Parent=GCA000153685_02189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899152.1,SO:0001217,UniParc:UPI00001650AC,UniRef:UniRef100_P9WLL8,UniRef:UniRef50_P9WLL9,UniRef:UniRef90_P9WLL9
contig_1	Pyrodigal	gene	2330518	2331441	.	-	.	ID=GCA000153685_02190_gene;locus_tag=GCA000153685_02190;gene=blaC
contig_1	Pyrodigal	CDS	2330518	2331441	.	-	0	ID=GCA000153685_02190;Name=class A beta-lactamase BlaC;locus_tag=GCA000153685_02190;product=class A beta-lactamase BlaC;Dbxref=GO:0005576,GO:0005886,GO:0008800,GO:0030655,GO:0042597,GO:0046677;gene=blaC;Parent=GCA000153685_02190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:WP_003410677.1,RefSeq:WP_003410677.1,SO:0001217,UniParc:UPI00001269D0,UniRef:UniRef100_P9WKD3,UniRef:UniRef50_P9WKD3,UniRef:UniRef90_P9WKD3;ec_number=3.5.2.6
contig_1	Pyrodigal	gene	2331570	2332133	.	+	.	ID=GCA000153685_02191_gene;locus_tag=GCA000153685_02191;gene=sigC
contig_1	Pyrodigal	CDS	2331570	2332133	.	+	0	ID=GCA000153685_02191;Name=RNA polymerase sigma factor SigC;locus_tag=GCA000153685_02191;product=RNA polymerase sigma factor SigC;Dbxref=GO:0001666,GO:0003677,GO:0006352,GO:0006355,GO:0009408,GO:0009410,GO:0009415,GO:0016987;gene=sigC;Parent=GCA000153685_02191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE63E,UniRef:UniRef100_P9WGH1,UniRef:UniRef50_P9WGH1,UniRef:UniRef90_P9WGH1
contig_1	Pyrodigal	gene	2332123	2332857	.	-	.	ID=GCA000153685_02192_gene;locus_tag=GCA000153685_02192;gene=cobK
contig_1	Pyrodigal	CDS	2332123	2332857	.	-	0	ID=GCA000153685_02192;Name=cobalt-precorrin-6A reductase;locus_tag=GCA000153685_02192;product=cobalt-precorrin-6A reductase;Dbxref=GO:0009236,GO:0016994;gene=cobK;Parent=GCA000153685_02192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900455.1,SO:0001217,UniParc:UPI0000127DE8,UniRef:UniRef100_P9WP89,UniRef:UniRef50_Q53139,UniRef:UniRef90_P9WP89;ec_number=1.3.1.54
contig_1	Pyrodigal	gene	2332854	2333609	.	-	.	ID=GCA000153685_02193_gene;locus_tag=GCA000153685_02193;gene=cobM
contig_1	Pyrodigal	CDS	2332854	2333609	.	-	0	ID=GCA000153685_02193;Name=precorrin-4 C(11)-methyltransferase;locus_tag=GCA000153685_02193;product=precorrin-4 C(11)-methyltransferase;Dbxref=GO:0009236,GO:0032259,GO:0046026;gene=cobM;Parent=GCA000153685_02193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003906733.1,SO:0001217,UniParc:UPI0000127DEE,UniRef:UniRef100_P9WGB1,UniRef:UniRef50_P9WGB1,UniRef:UniRef90_P9WGB1;ec_number=2.1.1.133
contig_1	Pyrodigal	gene	2333606	2334778	.	-	.	ID=GCA000153685_02194_gene;locus_tag=GCA000153685_02194;gene=cobL
contig_1	Pyrodigal	CDS	2333606	2334778	.	-	0	ID=GCA000153685_02194;Name=Precorrin-6Y C(5%2C15)-methyltransferase [decarboxylating];locus_tag=GCA000153685_02194;product=Precorrin-6Y C(5%2C15)-methyltransferase [decarboxylating];Dbxref=GO:0008276,GO:0009236,GO:0009274,GO:0032259,GO:0046025;gene=cobL;Parent=GCA000153685_02194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00595,RefSeq:WP_003899155.1,SO:0001217,UniParc:UPI00005EE640,UniRef:UniRef100_A0A0H3LBH6,UniRef:UniRef50_P9WGA9,UniRef:UniRef90_P9WGA9;ec_number=2.1.1.132
contig_1	Pyrodigal	gene	2334846	2335595	.	-	.	ID=GCA000153685_02195_gene;locus_tag=GCA000153685_02195
contig_1	Pyrodigal	CDS	2334846	2335595	.	-	0	ID=GCA000153685_02195;Name=putative oxidoreductase Rv2073c;locus_tag=GCA000153685_02195;product=putative oxidoreductase Rv2073c;Dbxref=GO:0016491;Parent=GCA000153685_02195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900457.1,SO:0001217,UniParc:UPI000013B676,UniRef:UniRef100_P9WGR3,UniRef:UniRef50_P9WGR3,UniRef:UniRef90_P9WGR3;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2335631	2336038	.	+	.	ID=GCA000153685_02196_gene;locus_tag=GCA000153685_02196
contig_1	Pyrodigal	CDS	2335631	2336038	.	+	0	ID=GCA000153685_02196;Name=F420-dependent biliverdin reductase;locus_tag=GCA000153685_02196;product=F420-dependent biliverdin reductase;Dbxref=GO:0005576,GO:0009274,GO:0009986,GO:0016627,GO:0042803,GO:0070967;Parent=GCA000153685_02196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899157,KEGG:K23825,RefSeq:WP_009939445.1,SO:0001217,UniParc:UPI0001900DDE,UniRef:UniRef100_P9WLL7,UniRef:UniRef50_P9WLL7,UniRef:UniRef90_P9WLL7;ec_number=1.3.98.-
contig_1	Pyrodigal	gene	2336048	2337475	.	-	.	ID=GCA000153685_02197_gene;locus_tag=GCA000153685_02197
contig_1	Pyrodigal	CDS	2336048	2337475	.	-	0	ID=GCA000153685_02197;Name=putative protein Rv2075c;locus_tag=GCA000153685_02197;product=putative protein Rv2075c;Dbxref=GO:0005886,GO:0006629,GO:0008081;Parent=GCA000153685_02197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A20E,UniRef:UniRef100_P9WLL5,UniRef:UniRef50_P9WLL5,UniRef:UniRef90_P9WLL5
contig_1	Pyrodigal	gene	2337669	2337833	.	-	.	ID=GCA000153685_02198_gene;locus_tag=GCA000153685_02198
contig_1	Pyrodigal	CDS	2337669	2337833	.	-	0	ID=GCA000153685_02198;Name=putative protein Mb2101c;locus_tag=GCA000153685_02198;product=putative protein Mb2101c;Dbxref=GO:0005886;Parent=GCA000153685_02198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456349.1,SO:0001217,UniParc:UPI000252D2A0,UniRef:UniRef100_A0A0H3LEP6,UniRef:UniRef50_P9WLL3,UniRef:UniRef90_P9WLL3
contig_1	Pyrodigal	gene	2337955	2338926	.	-	.	ID=GCA000153685_02199_gene;locus_tag=GCA000153685_02199
contig_1	Pyrodigal	CDS	2337955	2338926	.	-	0	ID=GCA000153685_02199;Name=putative protein Mb2102c;locus_tag=GCA000153685_02199;product=putative protein Mb2102c;Dbxref=GO:0005886;Parent=GCA000153685_02199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899159.1,SO:0001217,UniParc:UPI000013B67B,UniRef:UniRef100_P9WLL1,UniRef:UniRef50_P9WLL1,UniRef:UniRef90_P9WLL1
contig_1	Pyrodigal	gene	2339691	2340005	.	+	.	ID=GCA000153685_02200_gene;locus_tag=GCA000153685_02200
contig_1	Pyrodigal	CDS	2339691	2340005	.	+	0	ID=GCA000153685_02200;Name=putative protein Mb2104;locus_tag=GCA000153685_02200;product=putative protein Mb2104;Parent=GCA000153685_02200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410700.1,SO:0001217,UniParc:UPI00001650B2,UniRef:UniRef100_P9WLK8,UniRef:UniRef50_P9WLK9,UniRef:UniRef90_P9WLK9
contig_1	Pyrodigal	gene	2339987	2341957	.	+	.	ID=GCA000153685_02201_gene;locus_tag=GCA000153685_02201
contig_1	Pyrodigal	CDS	2339987	2341957	.	+	0	ID=GCA000153685_02201;Name=putative protein Rv2079;locus_tag=GCA000153685_02201;product=putative protein Rv2079;Parent=GCA000153685_02201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410703.1,SO:0001217,UniParc:UPI00001650B3,UniRef:UniRef100_P9WLK6,UniRef:UniRef50_P9WLK7,UniRef:UniRef90_P9WLK7
contig_1	Pyrodigal	gene	2341929	2342501	.	+	.	ID=GCA000153685_02202_gene;locus_tag=GCA000153685_02202;gene=lppJ
contig_1	Pyrodigal	CDS	2341929	2342501	.	+	0	ID=GCA000153685_02202;Name=Putative lipoprotein LppJ;locus_tag=GCA000153685_02202;product=Putative lipoprotein LppJ;Dbxref=GO:0005576,GO:0005886;gene=lppJ;Parent=GCA000153685_02202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C5983D,UniRef:UniRef100_P9WK77,UniRef:UniRef50_P9WK77,UniRef:UniRef90_P9WK77
contig_1	Pyrodigal	gene	2342908	2343351	.	+	.	ID=GCA000153685_02203_gene;locus_tag=GCA000153685_02203
contig_1	Pyrodigal	CDS	2342908	2343351	.	+	0	ID=GCA000153685_02203;Name=Transmembrane protein;locus_tag=GCA000153685_02203;product=Transmembrane protein;Parent=GCA000153685_02203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000F517E7,UniRef:UniRef100_A0A0H3LAD2,UniRef:UniRef50_R4MF15,UniRef:UniRef90_R4MF15
contig_1	Pyrodigal	gene	2343566	2343871	.	-	.	ID=GCA000153685_02204_gene;locus_tag=GCA000153685_02204
contig_1	Pyrodigal	CDS	2343566	2343871	.	-	0	ID=GCA000153685_02204;Name=hypothetical protein;locus_tag=GCA000153685_02204;product=hypothetical protein;Parent=GCA000153685_02204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015630227.1,SO:0001217,UniParc:UPI0001BC7836,UniRef:UniRef100_A0A0E9A537,UniRef:UniRef50_A0A0U0TCF7,UniRef:UniRef90_A0A0U0TCF7
contig_1	Pyrodigal	gene	2343930	2344118	.	-	.	ID=GCA000153685_02205_gene;locus_tag=GCA000153685_02205
contig_1	Pyrodigal	CDS	2343930	2344118	.	-	0	ID=GCA000153685_02205;Name=hypothetical protein;locus_tag=GCA000153685_02205;product=hypothetical protein;Parent=GCA000153685_02205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6288,UniRef:UniRef100_A0A916LDF1,UniRef:UniRef50_A0A916LDF1,UniRef:UniRef90_A0A916LDF1
contig_1	Pyrodigal	gene	2344554	2345501	.	+	.	ID=GCA000153685_02206_gene;locus_tag=GCA000153685_02206
contig_1	Pyrodigal	CDS	2344554	2345501	.	+	0	ID=GCA000153685_02206;Name=Transmembrane protein;locus_tag=GCA000153685_02206;product=Transmembrane protein;Parent=GCA000153685_02206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2I7W8E6,UniRef:UniRef90_A0A2I7W8E6
contig_1	Pyrodigal	gene	2345498	2346442	.	+	.	ID=GCA000153685_02207_gene;locus_tag=GCA000153685_02207
contig_1	Pyrodigal	CDS	2345498	2346442	.	+	0	ID=GCA000153685_02207;Name=putative protein Rv2083;locus_tag=GCA000153685_02207;product=putative protein Rv2083;Dbxref=GO:0005886;Parent=GCA000153685_02207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900461.1,SO:0001217,UniParc:UPI00001650B6,UniRef:UniRef100_P9WLK2,UniRef:UniRef50_P9WLK3,UniRef:UniRef90_P9WLK3
contig_1	Pyrodigal	gene	2346429	2347571	.	+	.	ID=GCA000153685_02208_gene;locus_tag=GCA000153685_02208
contig_1	Pyrodigal	CDS	2346429	2347571	.	+	0	ID=GCA000153685_02208;Name=putative protein Rv2084;locus_tag=GCA000153685_02208;product=putative protein Rv2084;Dbxref=GO:0005886;Parent=GCA000153685_02208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000013B688,UniRef:UniRef100_P9WLK1,UniRef:UniRef50_P9WLK1,UniRef:UniRef90_P9WLK1
contig_1	Pyrodigal	gene	2347938	2348543	.	+	.	ID=GCA000153685_02209_gene;locus_tag=GCA000153685_02209
contig_1	Pyrodigal	CDS	2347938	2348543	.	+	0	ID=GCA000153685_02209;Name=putative protein Rv2086;locus_tag=GCA000153685_02209;product=putative protein Rv2086;Parent=GCA000153685_02209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899164.1,SO:0001217,UniParc:UPI000013B68D,UniRef:UniRef100_P64937,UniRef:UniRef50_P64937,UniRef:UniRef90_P64937
contig_1	Pyrodigal	gene	2349038	2350807	.	+	.	ID=GCA000153685_02210_gene;locus_tag=GCA000153685_02210;gene=pknJ
contig_1	Pyrodigal	CDS	2349038	2350807	.	+	0	ID=GCA000153685_02210;Name=serine/threonine protein kinase PknJ;locus_tag=GCA000153685_02210;product=serine/threonine protein kinase PknJ;Dbxref=GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006110,GO:0016151,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0050897,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknJ;Parent=GCA000153685_02210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003410735,RefSeq:WP_003410735.1,SO:0001217,UniParc:UPI0000131B80,UniRef:UniRef100_P9WI67,UniRef:UniRef50_P9WI67,UniRef:UniRef90_P9WI67;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	2350824	2352038	.	-	.	ID=GCA000153685_02211_gene;locus_tag=GCA000153685_02211;gene=pepE
contig_1	Pyrodigal	CDS	2350824	2352038	.	-	0	ID=GCA000153685_02211;Name=putative dipeptidase PepE;locus_tag=GCA000153685_02211;product=putative dipeptidase PepE;Dbxref=GO:0005886,GO:0016787,GO:0046872;gene=pepE;Parent=GCA000153685_02211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F628C,UniRef:UniRef100_P9WHS7,UniRef:UniRef50_P9WHS7,UniRef:UniRef90_P9WHS7;ec_number=3.4.13.-
contig_1	Pyrodigal	gene	2352261	2353181	.	+	.	ID=GCA000153685_02212_gene;locus_tag=GCA000153685_02212
contig_1	Pyrodigal	CDS	2352261	2353181	.	+	0	ID=GCA000153685_02212;Name=5'-3' exonuclease;locus_tag=GCA000153685_02212;product=5'-3' exonuclease;Dbxref=GO:0003677,GO:0008409,GO:0009274,GO:0017108,GO:0033567;Parent=GCA000153685_02212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003914371.1,SO:0001217,UniParc:UPI0001E624F8,UniRef:UniRef100_UPI0018659E60,UniRef:UniRef50_P9WNU3,UniRef:UniRef90_P9WNU3;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	2353185	2353919	.	-	.	ID=GCA000153685_02213_gene;locus_tag=GCA000153685_02213
contig_1	Pyrodigal	CDS	2353185	2353919	.	-	0	ID=GCA000153685_02213;Name=putative protein Mb2118c;locus_tag=GCA000153685_02213;product=putative protein Mb2118c;Dbxref=GO:0016020;Parent=GCA000153685_02213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410762.1,SO:0001217,UniParc:UPI000013B694,UniRef:UniRef100_P9WLJ5,UniRef:UniRef50_P9WLJ5,UniRef:UniRef90_P9WLJ5
contig_1	Pyrodigal	gene	2353961	2356681	.	-	.	ID=GCA000153685_02214_gene;locus_tag=GCA000153685_02214;gene=helY
contig_1	Pyrodigal	CDS	2353961	2356681	.	-	0	ID=GCA000153685_02214;Name=putative helicase HelY;locus_tag=GCA000153685_02214;product=putative helicase HelY;Dbxref=GO:0003676,GO:0003724,GO:0005524,GO:0005829,GO:0005886,GO:0009274,GO:0016787,GO:0055087,GO:0070478;gene=helY;Parent=GCA000153685_02214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899167.1,SO:0001217,UniParc:UPI000012C3F8,UniRef:UniRef100_P9WMR1,UniRef:UniRef50_P9WMR1,UniRef:UniRef90_P9WMR1;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	2356798	2357652	.	-	.	ID=GCA000153685_02215_gene;locus_tag=GCA000153685_02215;gene=tatC
contig_1	Pyrodigal	CDS	2356798	2357652	.	-	0	ID=GCA000153685_02215;Name=twin-arginine translocase subunit TatC;locus_tag=GCA000153685_02215;product=twin-arginine translocase subunit TatC;Dbxref=GO:0005886,GO:0015628;gene=tatC;Parent=GCA000153685_02215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03727,RefSeq:WP_009937728.1,SO:0001217,UniParc:UPI00001650B8,UniRef:UniRef100_A0A0E8UZW2,UniRef:UniRef50_A0A0E8UZW2,UniRef:UniRef90_A0A0E8UZW2;ec_number=5.6.2.6
contig_1	Pyrodigal	gene	2357741	2357992	.	-	.	ID=GCA000153685_02216_gene;locus_tag=GCA000153685_02216;gene=tatA
contig_1	Pyrodigal	CDS	2357741	2357992	.	-	0	ID=GCA000153685_02216;Name=Sec-independent protein translocase subunit TatA;locus_tag=GCA000153685_02216;product=Sec-independent protein translocase subunit TatA;Dbxref=GO:0008320,GO:0016020,GO:0033281,GO:0043953;gene=tatA;Parent=GCA000153685_02216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410768.1,SO:0001217,UniParc:UPI00001368F1,UniRef:UniRef100_P9WGA1,UniRef:UniRef50_P9WGA1,UniRef:UniRef90_P9WGA1
contig_1	Pyrodigal	gene	2358060	2359010	.	-	.	ID=GCA000153685_02217_gene;locus_tag=GCA000153685_02217;gene=pafC
contig_1	Pyrodigal	CDS	2358060	2359010	.	-	0	ID=GCA000153685_02217;Name=Protein PafC;locus_tag=GCA000153685_02217;product=Protein PafC;Dbxref=GO:0009274;gene=pafC;Parent=GCA000153685_02217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410772.1,SO:0001217,UniParc:UPI000013B69A,UniRef:UniRef100_P9WIL9,UniRef:UniRef50_P9WIL9,UniRef:UniRef90_P9WIL9
contig_1	Pyrodigal	gene	2359007	2360005	.	-	.	ID=GCA000153685_02218_gene;locus_tag=GCA000153685_02218;gene=pafB
contig_1	Pyrodigal	CDS	2359007	2360005	.	-	0	ID=GCA000153685_02218;Name=Protein PafB;locus_tag=GCA000153685_02218;product=Protein PafB;Dbxref=GO:0005886,GO:0009274;gene=pafB;Parent=GCA000153685_02218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410775.1,SO:0001217,UniParc:UPI000013B69D,UniRef:UniRef100_P9WIM1,UniRef:UniRef50_P9WIM1,UniRef:UniRef90_P9WIM1
contig_1	Pyrodigal	gene	2360014	2361357	.	-	.	ID=GCA000153685_02219_gene;locus_tag=GCA000153685_02219;gene=pafA
contig_1	Pyrodigal	CDS	2360014	2361357	.	-	0	ID=GCA000153685_02219;Name=Pup--protein ligase;locus_tag=GCA000153685_02219;product=Pup--protein ligase;Dbxref=GO:0000287,GO:0005524,GO:0010498,GO:0016879,GO:0019787,GO:0019941,GO:0070490;gene=pafA;Parent=GCA000153685_02219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003910893.1,SO:0001217,UniParc:UPI00005EE647,UniRef:UniRef100_P9WNU7,UniRef:UniRef50_P9WNU7,UniRef:UniRef90_P9WNU7;ec_number=6.3.1.19
contig_1	Pyrodigal	gene	2361424	2362899	.	-	.	ID=GCA000153685_02220_gene;locus_tag=GCA000153685_02220;gene=pE_PGRS36
contig_1	Pyrodigal	CDS	2361424	2362899	.	-	0	ID=GCA000153685_02220;Name=putative PE-PGRS family protein PE_PGRS36;locus_tag=GCA000153685_02220;product=putative PE-PGRS family protein PE_PGRS36;gene=pE_PGRS36;Parent=GCA000153685_02220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410786.1,SO:0001217,UniParc:UPI000013B6A0,UniRef:UniRef100_P0A689,UniRef:UniRef50_P0A689,UniRef:UniRef90_P0A689
contig_1	Pyrodigal	gene	2363082	2364734	.	+	.	ID=GCA000153685_02221_gene;locus_tag=GCA000153685_02221
contig_1	Pyrodigal	CDS	2363082	2364734	.	+	0	ID=GCA000153685_02221;Name=putative protein Mb2126;locus_tag=GCA000153685_02221;product=putative protein Mb2126;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_02221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900464.1,SO:0001217,UniParc:UPI000013B78B,UniRef:UniRef100_P9WLJ3,UniRef:UniRef50_P9WLJ3,UniRef:UniRef90_P9WLJ3
contig_1	Pyrodigal	gene	2364933	2366849	.	+	.	ID=GCA000153685_02222_gene;locus_tag=GCA000153685_02222
contig_1	Pyrodigal	CDS	2364933	2366849	.	+	0	ID=GCA000153685_02222;Name=SNF2/RAD54 family helicase;locus_tag=GCA000153685_02222;product=SNF2/RAD54 family helicase;Parent=GCA000153685_02222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A29A,UniRef:UniRef100_A0A0H3LHG2,UniRef:UniRef50_A0A0H3LHG2,UniRef:UniRef90_A0A0H3LHG2
contig_1	Pyrodigal	gene	2367007	2367441	.	-	.	ID=GCA000153685_02223_gene;locus_tag=GCA000153685_02223;gene=vapC37
contig_1	Pyrodigal	CDS	2367007	2367441	.	-	0	ID=GCA000153685_02223;Name=Ribonuclease VapC37;locus_tag=GCA000153685_02223;product=Ribonuclease VapC37;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0045926;gene=vapC37;Parent=GCA000153685_02223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410811.1,SO:0001217,UniParc:UPI00001652CC,UniRef:UniRef100_O53501,UniRef:UniRef50_O53501,UniRef:UniRef90_O53501;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2367448	2367702	.	-	.	ID=GCA000153685_02224_gene;locus_tag=GCA000153685_02224;gene=vapB37
contig_1	Pyrodigal	CDS	2367448	2367702	.	-	0	ID=GCA000153685_02224;Name=Putative antitoxin VapB37;locus_tag=GCA000153685_02224;product=Putative antitoxin VapB37;gene=vapB37;Parent=GCA000153685_02224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410814.1,SO:0001217,UniParc:UPI00000D114F,UniRef:UniRef100_P9WJ27,UniRef:UniRef50_P9WJ27,UniRef:UniRef90_P9WJ27
contig_1	Pyrodigal	gene	2367718	2367975	.	-	.	ID=GCA000153685_02225_gene;locus_tag=GCA000153685_02225
contig_1	Pyrodigal	CDS	2367718	2367975	.	-	0	ID=GCA000153685_02225;Name=Proteasome subunit alpha;locus_tag=GCA000153685_02225;product=Proteasome subunit alpha;Parent=GCA000153685_02225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410816.1,SO:0001217,UniParc:UPI0000EF4834,UniRef:UniRef100_Q8VJQ3,UniRef:UniRef50_A0A2I7W8I1,UniRef:UniRef90_A0A2I7W8I1
contig_1	Pyrodigal	gene	2368922	2369218	.	+	.	ID=GCA000153685_02226_gene;locus_tag=GCA000153685_02226
contig_1	Pyrodigal	CDS	2368922	2369218	.	+	0	ID=GCA000153685_02226;Name=PE family protein PE22;locus_tag=GCA000153685_02226;product=PE family protein PE22;Parent=GCA000153685_02226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003410820.1,SO:0001217,UniParc:UPI00000D5F29,UniRef:UniRef100_L7N6B5,UniRef:UniRef50_L7N6B5,UniRef:UniRef90_L7N6B5
contig_1	Pyrodigal	gene	2369274	2370005	.	+	.	ID=GCA000153685_02227_gene;locus_tag=GCA000153685_02227
contig_1	Pyrodigal	CDS	2369274	2370005	.	+	0	ID=GCA000153685_02227;Name=putative PPE family protein PPE36;locus_tag=GCA000153685_02227;product=putative PPE family protein PPE36;Parent=GCA000153685_02227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900467.1,SO:0001217,UniParc:UPI00000306DB,UniRef:UniRef100_P9WI01,UniRef:UniRef90_P9WI01
contig_1	Pyrodigal	gene	2370545	2371255	.	-	.	ID=GCA000153685_02228_gene;locus_tag=GCA000153685_02228;gene=prcA
contig_1	Pyrodigal	CDS	2370545	2371255	.	-	0	ID=GCA000153685_02228;Name=proteasome subunit alpha;locus_tag=GCA000153685_02228;product=proteasome subunit alpha;Dbxref=GO:0004298,GO:0005737,GO:0005886,GO:0009274,GO:0010498,GO:0019773,GO:0019941,GO:0030682,GO:0043161,GO:0051603;gene=prcA;Parent=GCA000153685_02228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03432,SO:0001217,UniRef:UniRef50_P9WHU1,UniRef:UniRef90_P9WHU1;ec_number=3.4.25.1
contig_1	Pyrodigal	gene	2371288	2372163	.	-	.	ID=GCA000153685_02229_gene;locus_tag=GCA000153685_02229;gene=prcB
contig_1	Pyrodigal	CDS	2371288	2372163	.	-	0	ID=GCA000153685_02229;Name=proteasome subunit beta;locus_tag=GCA000153685_02229;product=proteasome subunit beta;Dbxref=GO:0004298,GO:0005737,GO:0005839,GO:0010498,GO:0019774,GO:0019941;gene=prcB;Parent=GCA000153685_02229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411023.1,SO:0001217,UniParc:UPI00000D5EA3,UniRef:UniRef100_P9WHT9,UniRef:UniRef50_P9WHT9,UniRef:UniRef90_P9WHT9;ec_number=3.4.25.1
contig_1	Pyrodigal	gene	2372160	2372354	.	-	.	ID=GCA000153685_02230_gene;locus_tag=GCA000153685_02230;gene=pup
contig_1	Pyrodigal	CDS	2372160	2372354	.	-	0	ID=GCA000153685_02230;Name=Prokaryotic ubiquitin-like protein Pup;locus_tag=GCA000153685_02230;product=Prokaryotic ubiquitin-like protein Pup;Dbxref=GO:0010498,GO:0019941,GO:0031386,GO:0070490,GO:0070628;gene=pup;Parent=GCA000153685_02230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13570,RefSeq:WP_003411026.1,SO:0001217,UniParc:UPI00000D107E,UniRef:UniRef100_P9WHN5,UniRef:UniRef50_P9WHN5,UniRef:UniRef90_P9WHN5
contig_1	Pyrodigal	gene	2372467	2373984	.	-	.	ID=GCA000153685_02231_gene;locus_tag=GCA000153685_02231;gene=dop
contig_1	Pyrodigal	CDS	2372467	2373984	.	-	0	ID=GCA000153685_02231;Name=pup deamidase/depupylase;locus_tag=GCA000153685_02231;product=pup deamidase/depupylase;Dbxref=GO:0005524,GO:0008233,GO:0010498,GO:0016787,GO:0016811,GO:0019941,GO:0046872,GO:0070490;gene=dop;Parent=GCA000153685_02231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411029,KEGG:K20814,RefSeq:WP_003411029.1,SO:0001217,UniParc:UPI00000D2C9A,UniRef:UniRef100_P9WNU9,UniRef:UniRef50_P9WNU9,UniRef:UniRef90_P9WNU9;ec_number=3.5.1.119
contig_1	Pyrodigal	gene	2374010	2374237	.	+	.	ID=GCA000153685_02232_gene;locus_tag=GCA000153685_02232
contig_1	Pyrodigal	CDS	2374010	2374237	.	+	0	ID=GCA000153685_02232;Name=hypothetical protein;locus_tag=GCA000153685_02232;product=hypothetical protein;Parent=GCA000153685_02232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009939857.1,SO:0001217,UniParc:UPI000169A29C,UniRef:UniRef100_A0A9P1LFQ3,UniRef:UniRef50_A0A9P1LFQ3,UniRef:UniRef90_A0A9P1LFQ3
contig_1	Pyrodigal	gene	2374249	2375442	.	+	.	ID=GCA000153685_02233_gene;locus_tag=GCA000153685_02233
contig_1	Pyrodigal	CDS	2374249	2375442	.	+	0	ID=GCA000153685_02233;Name=Integral membrane protein;locus_tag=GCA000153685_02233;product=Integral membrane protein;Parent=GCA000153685_02233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411031.1,SO:0001217,UniParc:UPI00000D0FE1,UniRef:UniRef100_A5U4D9,UniRef:UniRef50_A0A1R0VNL8,UniRef:UniRef90_R4MF53
contig_1	Pyrodigal	gene	2375435	2376076	.	+	.	ID=GCA000153685_02234_gene;locus_tag=GCA000153685_02234
contig_1	Pyrodigal	CDS	2375435	2376076	.	+	0	ID=GCA000153685_02234;Name=Conserved protein;locus_tag=GCA000153685_02234;product=Conserved protein;Parent=GCA000153685_02234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE64E,UniRef:UniRef100_O33249,UniRef:UniRef50_L0IXK3,UniRef:UniRef90_O33249
contig_1	Pyrodigal	gene	2376080	2377909	.	-	.	ID=GCA000153685_02235_gene;locus_tag=GCA000153685_02235;gene=arc
contig_1	Pyrodigal	CDS	2376080	2377909	.	-	0	ID=GCA000153685_02235;Name=proteasome ATPase;locus_tag=GCA000153685_02235;product=proteasome ATPase;Dbxref=GO:0000502,GO:0005524,GO:0010498,GO:0016887,GO:0019941;gene=arc;Parent=GCA000153685_02235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1222,COG:O,RefSeq:WP_003411035.1,SO:0001217,UniParc:UPI000013B79F,UniRef:UniRef100_P9WQN5,UniRef:UniRef50_P9WQN5,UniRef:UniRef90_P9WQN5;ec_number=5.6.1.5
contig_1	Pyrodigal	gene	2378190	2378759	.	+	.	ID=GCA000153685_02236_gene;locus_tag=GCA000153685_02236;gene=lppK
contig_1	Pyrodigal	CDS	2378190	2378759	.	+	0	ID=GCA000153685_02236;Name=Putative lipoprotein LppK;locus_tag=GCA000153685_02236;product=Putative lipoprotein LppK;Dbxref=GO:0005886;gene=lppK;Parent=GCA000153685_02236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900470.1,SO:0001217,UniParc:UPI000012E86E,UniRef:UniRef100_P9WK75,UniRef:UniRef50_P9WK75,UniRef:UniRef90_P9WK75
contig_1	Pyrodigal	gene	2378767	2379060	.	+	.	ID=GCA000153685_02237_gene;locus_tag=GCA000153685_02237
contig_1	Pyrodigal	CDS	2378767	2379060	.	+	0	ID=GCA000153685_02237;Name=DUF503 domain-containing protein;locus_tag=GCA000153685_02237;product=DUF503 domain-containing protein;Parent=GCA000153685_02237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09764,RefSeq:WP_003411038.1,SO:0001217,UniParc:UPI00000D10D2,UniRef:UniRef100_O33252,UniRef:UniRef50_A0A024H645,UniRef:UniRef90_O33252
contig_1	Pyrodigal	gene	2379089	2379859	.	-	.	ID=GCA000153685_02238_gene;locus_tag=GCA000153685_02238;gene=trmI
contig_1	Pyrodigal	CDS	2379089	2379859	.	-	0	ID=GCA000153685_02238;Name=tRNA (adenine(58)-N(1))-methyltransferase TrmI;locus_tag=GCA000153685_02238;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;Dbxref=GO:0005886,GO:0008033,GO:0030488,GO:0031515,GO:0160107;gene=trmI;Parent=GCA000153685_02238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411041,SO:0001217,UniParc:UPI0003AA08B5,UniRef:UniRef100_P9WFZ1,UniRef:UniRef50_P9WFZ1,UniRef:UniRef90_P9WFZ1;ec_number=2.1.1.220
contig_1	Pyrodigal	gene	2380005	2380841	.	+	.	ID=GCA000153685_02239_gene;locus_tag=GCA000153685_02239
contig_1	Pyrodigal	CDS	2380005	2380841	.	+	0	ID=GCA000153685_02239;Name=PD-(D/E)XK endonuclease-like domain-containing protein;locus_tag=GCA000153685_02239;product=PD-(D/E)XK endonuclease-like domain-containing protein;Parent=GCA000153685_02239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899178.1,SO:0001217,UniParc:UPI00000D115E,UniRef:UniRef100_O33254,UniRef:UniRef50_Q5YUW1,UniRef:UniRef90_O33254
contig_1	Pyrodigal	gene	2380864	2381346	.	-	.	ID=GCA000153685_02240_gene;locus_tag=GCA000153685_02240
contig_1	Pyrodigal	CDS	2380864	2381346	.	-	0	ID=GCA000153685_02240;Name=Glycine zipper 2TM domain-containing protein;locus_tag=GCA000153685_02240;product=Glycine zipper 2TM domain-containing protein;Parent=GCA000153685_02240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900471.1,SO:0001217,UniParc:UPI00000C151D,UniRef:UniRef100_A5U4E6,UniRef:UniRef50_A0A154IQI1,UniRef:UniRef90_Q8VJP9
contig_1	Pyrodigal	gene	2381425	2382279	.	-	.	ID=GCA000153685_02241_gene;locus_tag=GCA000153685_02241;gene=hisG
contig_1	Pyrodigal	CDS	2381425	2382279	.	-	0	ID=GCA000153685_02241;Name=ATP phosphoribosyltransferase;locus_tag=GCA000153685_02241;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0000287,GO:0003879,GO:0005524,GO:0005737,GO:0005886,GO:0016208;gene=hisG;Parent=GCA000153685_02241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00765,RefSeq:WP_003411047.1,SO:0001217,UniParc:UPI000012C750,UniRef:UniRef100_P9WMN1,UniRef:UniRef50_P9WMN1,UniRef:UniRef90_P9WMN1;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	2382282	2382563	.	-	.	ID=GCA000153685_02242_gene;locus_tag=GCA000153685_02242;gene=hisE
contig_1	Pyrodigal	CDS	2382282	2382563	.	-	0	ID=GCA000153685_02242;Name=phosphoribosyl-ATP diphosphatase;locus_tag=GCA000153685_02242;product=phosphoribosyl-ATP diphosphatase;Dbxref=GO:0000105,GO:0000287,GO:0004636,GO:0005524,GO:0005737,GO:0009274,GO:0075139;gene=hisE;Parent=GCA000153685_02242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899180.1,SO:0001217,UniParc:UPI000012C780,UniRef:UniRef100_P9WMM9,UniRef:UniRef50_P9WMM9,UniRef:UniRef90_P9WMM9;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	2382690	2384111	.	+	.	ID=GCA000153685_02243_gene;locus_tag=GCA000153685_02243;gene=pPE37
contig_1	Pyrodigal	CDS	2382690	2384111	.	+	0	ID=GCA000153685_02243;Name=putative PPE family protein PPE37;locus_tag=GCA000153685_02243;product=putative PPE family protein PPE37;Dbxref=GO:0052572,GO:0075139;gene=pPE37;Parent=GCA000153685_02243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411053.1,SO:0001217,UniParc:UPI00000C1594,UniRef:UniRef100_Q79FH3,UniRef:UniRef50_Q79FH3,UniRef:UniRef90_Q79FH3
contig_1	Pyrodigal	gene	2384108	2387686	.	-	.	ID=GCA000153685_02244_gene;locus_tag=GCA000153685_02244;gene=metH
contig_1	Pyrodigal	CDS	2384108	2387686	.	-	0	ID=GCA000153685_02244;Name=methionine synthase;locus_tag=GCA000153685_02244;product=methionine synthase;Dbxref=GO:0005829,GO:0005886,GO:0008270,GO:0008705,GO:0009086,GO:0009274,GO:0031419,GO:0032259,GO:0046653,GO:0050667;gene=metH;Parent=GCA000153685_02244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900472.1,SO:0001217,UniParc:UPI000012EF93,UniRef:UniRef100_O33259,UniRef:UniRef50_O33259,UniRef:UniRef90_O33259;ec_number=2.1.1.13
contig_1	Pyrodigal	gene	2387912	2388790	.	+	.	ID=GCA000153685_02245_gene;locus_tag=GCA000153685_02245
contig_1	Pyrodigal	CDS	2387912	2388790	.	+	0	ID=GCA000153685_02245;Name=PAC2 family protein;locus_tag=GCA000153685_02245;product=PAC2 family protein;Parent=GCA000153685_02245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411060.1,SO:0001217,UniParc:UPI00001650BC,UniRef:UniRef100_A0A1R3Y0D5,UniRef:UniRef50_F6ENE0,UniRef:UniRef90_O33260
contig_1	Pyrodigal	gene	2388821	2389591	.	-	.	ID=GCA000153685_02246_gene;locus_tag=GCA000153685_02246
contig_1	Pyrodigal	CDS	2388821	2389591	.	-	0	ID=GCA000153685_02246;Name=PE-PGRS family protein PE_PGRS37;locus_tag=GCA000153685_02246;product=PE-PGRS family protein PE_PGRS37;Parent=GCA000153685_02246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411064.1,SO:0001217,UniParc:UPI000011E39C,UniRef:UniRef100_L0TBL4,UniRef:UniRef50_R4MF64,UniRef:UniRef90_L0TBL4
contig_1	Pyrodigal	gene	2389588	2389794	.	-	.	ID=GCA000153685_02247_gene;locus_tag=GCA000153685_02247
contig_1	Pyrodigal	CDS	2389588	2389794	.	-	0	ID=GCA000153685_02247;Name=PE-PGRS family protein;locus_tag=GCA000153685_02247;product=PE-PGRS family protein;Parent=GCA000153685_02247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_050167243.1,SO:0001217,UniParc:UPI00039C409C,UniRef:UniRef100_A0A0H3LHJ4,UniRef:UniRef50_A0A0H3LHJ4,UniRef:UniRef90_A0A0H3LHJ4
contig_1	Pyrodigal	gene	2390235	2391704	.	+	.	ID=GCA000153685_02248_gene;locus_tag=GCA000153685_02248;gene=ansP1
contig_1	Pyrodigal	CDS	2390235	2391704	.	+	0	ID=GCA000153685_02248;Name=L-asparagine permease 1;locus_tag=GCA000153685_02248;product=L-asparagine permease 1;Dbxref=GO:0005576,GO:0005886,GO:0006865,GO:0055085;gene=ansP1;Parent=GCA000153685_02248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11738,RefSeq:WP_003899182.1,SO:0001217,UniParc:UPI0000125B5B,UniRef:UniRef100_P9WQM9,UniRef:UniRef50_P9WQM7,UniRef:UniRef90_P9WQM9
contig_1	Pyrodigal	gene	2391704	2391907	.	+	.	ID=GCA000153685_02249_gene;locus_tag=GCA000153685_02249
contig_1	Pyrodigal	CDS	2391704	2391907	.	+	0	ID=GCA000153685_02249;Name=Transmembrane protein;locus_tag=GCA000153685_02249;product=Transmembrane protein;Parent=GCA000153685_02249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411082.1,SO:0001217,UniParc:UPI00000C151E,UniRef:UniRef100_O33262,UniRef:UniRef50_A0A557XW71,UniRef:UniRef90_A0A8I0JXC7
contig_1	Pyrodigal	gene	2391927	2392808	.	-	.	ID=GCA000153685_02250_gene;locus_tag=GCA000153685_02250
contig_1	Pyrodigal	CDS	2391927	2392808	.	-	0	ID=GCA000153685_02250;Name=Short chain dehydrogenase;locus_tag=GCA000153685_02250;product=Short chain dehydrogenase;Parent=GCA000153685_02250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411086.1,SO:0001217,UniParc:UPI00001652CE,UniRef:UniRef100_Q7D7H4,UniRef:UniRef50_A0A839RTE6,UniRef:UniRef90_A0A655JLB2
contig_1	Pyrodigal	gene	2392834	2394078	.	-	.	ID=GCA000153685_02251_gene;locus_tag=GCA000153685_02251;gene=mshC
contig_1	Pyrodigal	CDS	2392834	2394078	.	-	0	ID=GCA000153685_02251;Name=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;locus_tag=GCA000153685_02251;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;Dbxref=GO:0004817,GO:0005524,GO:0005829,GO:0006423,GO:0008270,GO:0010125,GO:0035446;gene=mshC;Parent=GCA000153685_02251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411091.1,SO:0001217,UniParc:UPI0000136345,UniRef:UniRef100_P9WJM9,UniRef:UniRef50_P9WJM9,UniRef:UniRef90_P9WJM9;ec_number=6.3.1.13
contig_1	Pyrodigal	gene	2394136	2394939	.	-	.	ID=GCA000153685_02252_gene;locus_tag=GCA000153685_02252;gene=cysQ
contig_1	Pyrodigal	CDS	2394136	2394939	.	-	0	ID=GCA000153685_02252;Name=3'(2')%2C5'-bisphosphate nucleotidase CysQ;locus_tag=GCA000153685_02252;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;Dbxref=GO:0000103,GO:0000287,GO:0005886,GO:0008441,GO:0008934,GO:0030145,GO:0042132,GO:0050427,GO:0050897;gene=cysQ;Parent=GCA000153685_02252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411096,KEGG:K01082,RefSeq:WP_003411096.1,SO:0001217,UniParc:UPI0000128D3F,UniRef:UniRef100_P9WKJ1,UniRef:UniRef50_P9WKJ1,UniRef:UniRef90_P9WKJ1;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	2395015	2395260	.	+	.	ID=GCA000153685_02253_gene;locus_tag=GCA000153685_02253;gene=copG
contig_1	Pyrodigal	CDS	2395015	2395260	.	+	0	ID=GCA000153685_02253;Name=Ribbon-helix-helix protein CopG domain-containing protein;locus_tag=GCA000153685_02253;product=Ribbon-helix-helix protein CopG domain-containing protein;gene=copG;Parent=GCA000153685_02253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000403F5F0,UniRef:UniRef100_O06243,UniRef:UniRef50_O06243,UniRef:UniRef90_O06243
contig_1	Pyrodigal	gene	2395257	2395415	.	-	.	ID=GCA000153685_02254_gene;locus_tag=GCA000153685_02254;pseudogene=unitary
contig_1	Pyrodigal	CDS	2395257	2395415	.	-	0	ID=GCA000153685_02254;Name=hypothetical protein;locus_tag=GCA000153685_02254;product=hypothetical protein;pseudogene=unitary;Parent=GCA000153685_02254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411100.1,SO:0001217,UniParc:UPI00005EE655,UniRef:UniRef100_A0A655JDB3,UniRef:UniRef50_A0A655JDB3,UniRef:UniRef90_A0A655JDB3
contig_1	Pyrodigal	gene	2395470	2396306	.	-	.	ID=GCA000153685_02255_gene;locus_tag=GCA000153685_02255
contig_1	Pyrodigal	CDS	2395470	2396306	.	-	0	ID=GCA000153685_02255;Name=Protein Rv2133c;locus_tag=GCA000153685_02255;product=Protein Rv2133c;Parent=GCA000153685_02255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62C61,UniRef:UniRef100_O06242,UniRef:UniRef50_O06242,UniRef:UniRef90_O06242
contig_1	Pyrodigal	gene	2396269	2396856	.	-	.	ID=GCA000153685_02256_gene;locus_tag=GCA000153685_02256
contig_1	Pyrodigal	CDS	2396269	2396856	.	-	0	ID=GCA000153685_02256;Name=DUF3090 domain-containing protein;locus_tag=GCA000153685_02256;product=DUF3090 domain-containing protein;Parent=GCA000153685_02256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411102.1,SO:0001217,UniParc:UPI00000D1059,UniRef:UniRef100_O06241,UniRef:UniRef50_A0A1H0LG59,UniRef:UniRef90_Q7AQ75
contig_1	Pyrodigal	gene	2396920	2397630	.	-	.	ID=GCA000153685_02257_gene;locus_tag=GCA000153685_02257
contig_1	Pyrodigal	CDS	2396920	2397630	.	-	0	ID=GCA000153685_02257;Name=Conserved protein;locus_tag=GCA000153685_02257;product=Conserved protein;Parent=GCA000153685_02257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411103.1,SO:0001217,UniParc:UPI00000D5EAD,UniRef:UniRef100_O06240,UniRef:UniRef50_A0A2X4U140,UniRef:UniRef90_O06240
contig_1	Pyrodigal	gene	2397627	2398457	.	-	.	ID=GCA000153685_02258_gene;locus_tag=GCA000153685_02258;gene=uppP
contig_1	Pyrodigal	CDS	2397627	2398457	.	-	0	ID=GCA000153685_02258;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000153685_02258;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555;gene=uppP;Parent=GCA000153685_02258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06153,RefSeq:WP_003411105.1,SO:0001217,UniParc:UPI00001652D0,UniRef:UniRef100_P9WFF9,UniRef:UniRef50_P9WFF9,UniRef:UniRef90_P9WFF9;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	2398521	2398829	.	-	.	ID=GCA000153685_02259_gene;locus_tag=GCA000153685_02259
contig_1	Pyrodigal	CDS	2398521	2398829	.	-	0	ID=GCA000153685_02259;Name=hypothetical protein;locus_tag=GCA000153685_02259;product=hypothetical protein;Parent=GCA000153685_02259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899184.1,SO:0001217,UniParc:UPI00005EE657,UniRef:UniRef100_O06238,UniRef:UniRef50_I4BKT0,UniRef:UniRef90_O06238
contig_1	Pyrodigal	gene	2399000	2400025	.	+	.	ID=GCA000153685_02260_gene;locus_tag=GCA000153685_02260;gene=lppL
contig_1	Pyrodigal	CDS	2399000	2400025	.	+	0	ID=GCA000153685_02260;Name=Conserved lipoprotein LppL;locus_tag=GCA000153685_02260;product=Conserved lipoprotein LppL;gene=lppL;Parent=GCA000153685_02260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61E35,UniRef:UniRef100_A5U4G4,UniRef:UniRef50_A0A1X1YTK0,UniRef:UniRef90_A5U4G4
contig_1	Pyrodigal	gene	2400022	2400303	.	+	.	ID=GCA000153685_02261_gene;locus_tag=GCA000153685_02261
contig_1	Pyrodigal	CDS	2400022	2400303	.	+	0	ID=GCA000153685_02261;Name=Dihydroorotate dehydrogenase;locus_tag=GCA000153685_02261;product=Dihydroorotate dehydrogenase;Parent=GCA000153685_02261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411112.1,SO:0001217,UniParc:UPI00005EE659,UniRef:UniRef100_A0A0H3LEY1,UniRef:UniRef50_A0A051TU20,UniRef:UniRef90_A0A0H3LEY1
contig_1	Pyrodigal	gene	2400294	2401412	.	+	.	ID=GCA000153685_02262_gene;locus_tag=GCA000153685_02262;gene=pyrD
contig_1	Pyrodigal	CDS	2400294	2401412	.	+	0	ID=GCA000153685_02262;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000153685_02262;product=quinone-dependent dihydroorotate dehydrogenase;Dbxref=GO:0004152,GO:0005737,GO:0005886,GO:0006207,GO:0016020,GO:0044205,GO:0106430;gene=pyrD;Parent=GCA000153685_02262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE65A,UniRef:UniRef100_A0A0E7THL7,UniRef:UniRef50_P9WHL1,UniRef:UniRef90_P9WHL1;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	2401417	2401947	.	-	.	ID=GCA000153685_02263_gene;locus_tag=GCA000153685_02263
contig_1	Pyrodigal	CDS	2401417	2401947	.	-	0	ID=GCA000153685_02263;Name=UPF0098 protein Mb2164c;locus_tag=GCA000153685_02263;product=UPF0098 protein Mb2164c;Dbxref=GO:0005576,GO:0005886,GO:0042802;Parent=GCA000153685_02263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411119.1,SO:0001217,UniParc:UPI000013B7BD,UniRef:UniRef100_P9WFN1,UniRef:UniRef50_P9WFN1,UniRef:UniRef90_P9WFN1
contig_1	Pyrodigal	gene	2401995	2403341	.	-	.	ID=GCA000153685_02264_gene;locus_tag=GCA000153685_02264
contig_1	Pyrodigal	CDS	2401995	2403341	.	-	0	ID=GCA000153685_02264;Name=Carboxypeptidase PM20D1;locus_tag=GCA000153685_02264;product=Carboxypeptidase PM20D1;Parent=GCA000153685_02264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411121.1,SO:0001217,UniParc:UPI00000D5E32,UniRef:UniRef100_L7N684,UniRef:UniRef50_A0A0N0A5W3,UniRef:UniRef90_A0A655A7C2
contig_1	tRNAscan-SE	gene	2403722	2403807	.	+	.	ID=GCA000153685_02265_gene;locus_tag=GCA000153685_02265;gene=trnL
contig_1	tRNAscan-SE	tRNA	2403722	2403807	.	+	.	ID=GCA000153685_02265;Name=tRNA-Leu(gag);locus_tag=GCA000153685_02265;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000153685_02265_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	2403928	2404245	.	-	.	ID=GCA000153685_02266_gene;locus_tag=GCA000153685_02266;gene=parE2
contig_1	Pyrodigal	CDS	2403928	2404245	.	-	0	ID=GCA000153685_02266;Name=Toxin ParE2;locus_tag=GCA000153685_02266;product=Toxin ParE2;Dbxref=GO:0044003;gene=parE2;Parent=GCA000153685_02266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411124.1,SO:0001217,UniParc:UPI00000D10FE,UniRef:UniRef100_P9WHG5,UniRef:UniRef50_P9WHG5,UniRef:UniRef90_P9WHG5
contig_1	Pyrodigal	gene	2404242	2404457	.	-	.	ID=GCA000153685_02267_gene;locus_tag=GCA000153685_02267;gene=parD2
contig_1	Pyrodigal	CDS	2404242	2404457	.	-	0	ID=GCA000153685_02267;Name=Antitoxin ParD2;locus_tag=GCA000153685_02267;product=Antitoxin ParD2;Dbxref=GO:0097351,GO:0098754;gene=parD2;Parent=GCA000153685_02267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19094,RefSeq:WP_003411127.1,SO:0001217,UniParc:UPI00000D2C9F,UniRef:UniRef100_P9WJ75,UniRef:UniRef50_P9WJ75,UniRef:UniRef90_P9WJ75
contig_1	Pyrodigal	gene	2404712	2405770	.	+	.	ID=GCA000153685_02268_gene;locus_tag=GCA000153685_02268
contig_1	Pyrodigal	CDS	2404712	2405770	.	+	0	ID=GCA000153685_02268;Name=Phosphoribosyltransferase domain-containing protein;locus_tag=GCA000153685_02268;product=Phosphoribosyltransferase domain-containing protein;Parent=GCA000153685_02268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411129.1,SO:0001217,UniParc:UPI00000D0FBE,UniRef:UniRef100_O06232,UniRef:UniRef50_O06232,UniRef:UniRef90_O06232
contig_1	Pyrodigal	gene	2405900	2406256	.	-	.	ID=GCA000153685_02269_gene;locus_tag=GCA000153685_02269
contig_1	Pyrodigal	CDS	2405900	2406256	.	-	0	ID=GCA000153685_02269;Name=Transmembrane protein;locus_tag=GCA000153685_02269;product=Transmembrane protein;Parent=GCA000153685_02269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411130.1,SO:0001217,UniParc:UPI00000D0FF4,UniRef:UniRef100_A5U4H1,UniRef:UniRef50_A0A0F5MZN4,UniRef:UniRef90_A0A8I0JZT5
contig_1	Pyrodigal	gene	2406351	2407133	.	-	.	ID=GCA000153685_02270_gene;locus_tag=GCA000153685_02270;gene=wag31
contig_1	Pyrodigal	CDS	2406351	2407133	.	-	0	ID=GCA000153685_02270;Name=cell wall synthesis protein Wag31;locus_tag=GCA000153685_02270;product=cell wall synthesis protein Wag31;Dbxref=GO:0005737,GO:0005886,GO:0008360,GO:0009273,GO:0009274,GO:0040009,GO:0050821,GO:0051301,GO:0060187;gene=wag31;Parent=GCA000153685_02270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411131,BlastRules:WP_011729650,RefSeq:WP_003411131.1,SO:0001217,UniParc:UPI000012569F,UniRef:UniRef100_P9WMU1,UniRef:UniRef50_P9WMU1,UniRef:UniRef90_P9WMU1
contig_1	Pyrodigal	gene	2407401	2407688	.	-	.	ID=GCA000153685_02271_gene;locus_tag=GCA000153685_02271;gene=ycf19
contig_1	Pyrodigal	CDS	2407401	2407688	.	-	0	ID=GCA000153685_02271;Name=YggT;locus_tag=GCA000153685_02271;product=YggT;gene=ycf19;Parent=GCA000153685_02271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,SO:0001217,UniParc:UPI00005EE65C,UniRef:UniRef100_A0A0E9A908,UniRef:UniRef50_K0ELF2,UniRef:UniRef90_Q73YR5
contig_1	Pyrodigal	gene	2407853	2408509	.	-	.	ID=GCA000153685_02272_gene;locus_tag=GCA000153685_02272;gene=sepF
contig_1	Pyrodigal	CDS	2407853	2408509	.	-	0	ID=GCA000153685_02272;Name=cell division protein SepF;locus_tag=GCA000153685_02272;product=cell division protein SepF;Dbxref=GO:0000917,GO:0005737,GO:0005886,GO:0043093;gene=sepF;Parent=GCA000153685_02272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411133,KEGG:K09772,RefSeq:WP_015456354.1,SO:0001217,UniParc:UPI000169A308,UniRef:UniRef100_A0A0H3LAZ7,UniRef:UniRef50_P9WGJ5,UniRef:UniRef90_P9WGJ5
contig_1	Pyrodigal	gene	2408575	2409360	.	-	.	ID=GCA000153685_02273_gene;locus_tag=GCA000153685_02273
contig_1	Pyrodigal	CDS	2408575	2409360	.	-	0	ID=GCA000153685_02273;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA000153685_02273;product=Pyridoxal phosphate homeostasis protein;Dbxref=GO:0030170;Parent=GCA000153685_02273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F629C,UniRef:UniRef100_P9WFQ7,UniRef:UniRef50_P9WFQ7,UniRef:UniRef90_P9WFQ7
contig_1	Pyrodigal	gene	2409357	2410160	.	-	.	ID=GCA000153685_02274_gene;locus_tag=GCA000153685_02274;gene=pgeF
contig_1	Pyrodigal	CDS	2409357	2410160	.	-	0	ID=GCA000153685_02274;Name=peptidoglycan editing factor PgeF;locus_tag=GCA000153685_02274;product=peptidoglycan editing factor PgeF;Dbxref=GO:0004000,GO:0005507,GO:0009274,GO:0016491,GO:0017061,GO:0046936;gene=pgeF;Parent=GCA000153685_02274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05810,SO:0001217,UniParc:UPI0004E43A03,UniRef:UniRef100_A0A0E9A6X6,UniRef:UniRef50_P9WKD5,UniRef:UniRef90_P9WKD5;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2410120	2411259	.	-	.	ID=GCA000153685_02275_gene;locus_tag=GCA000153685_02275;gene=ftsZ
contig_1	Pyrodigal	CDS	2410120	2411259	.	-	0	ID=GCA000153685_02275;Name=cell division protein FtsZ;locus_tag=GCA000153685_02275;product=cell division protein FtsZ;Dbxref=GO:0000287,GO:0000910,GO:0000917,GO:0000921,GO:0003924,GO:0005525,GO:0005737,GO:0005886,GO:0032153,GO:0043093,GO:0045787,GO:0051258,GO:0051301;gene=ftsZ;Parent=GCA000153685_02275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_003411144.1,SO:0001217,UniParc:UPI000012AD2A,UniRef:UniRef100_P9WN95,UniRef:UniRef50_P9WN95,UniRef:UniRef90_P9WN95
contig_1	Pyrodigal	gene	2411432	2412376	.	-	.	ID=GCA000153685_02276_gene;locus_tag=GCA000153685_02276;gene=ftsQ
contig_1	Pyrodigal	CDS	2411432	2412376	.	-	0	ID=GCA000153685_02276;Name=cell division protein FtsQ;locus_tag=GCA000153685_02276;product=cell division protein FtsQ;Dbxref=GO:0005829,GO:0005886,GO:0032153,GO:0043093,GO:0090529;gene=ftsQ;Parent=GCA000153685_02276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411157,RefSeq:WP_003411157.1,SO:0001217,UniParc:UPI000012ACED,UniRef:UniRef100_P9WNA1,UniRef:UniRef50_P9WNA1,UniRef:UniRef90_P9WNA1
contig_1	Pyrodigal	gene	2412373	2413857	.	-	.	ID=GCA000153685_02277_gene;locus_tag=GCA000153685_02277;gene=murC
contig_1	Pyrodigal	CDS	2412373	2413857	.	-	0	ID=GCA000153685_02277;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000153685_02277;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000153685_02277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411159.1,SO:0001217,UniParc:UPI000012F966,UniRef:UniRef100_P9WJL7,UniRef:UniRef50_P9WJL7,UniRef:UniRef90_P9WJL7;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	2413854	2415086	.	-	.	ID=GCA000153685_02278_gene;locus_tag=GCA000153685_02278;gene=murG
contig_1	Pyrodigal	CDS	2413854	2415086	.	-	0	ID=GCA000153685_02278;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000153685_02278;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000153685_02278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02563,RefSeq:WP_003899190.1,SO:0001217,UniParc:UPI000012F9D9,UniRef:UniRef100_P9WJK9,UniRef:UniRef50_P9WJK9,UniRef:UniRef90_P9WJK9;ec_number=2.4.1.227
contig_1	Pyrodigal	gene	2415083	2416657	.	-	.	ID=GCA000153685_02279_gene;locus_tag=GCA000153685_02279;gene=ftsW
contig_1	Pyrodigal	CDS	2415083	2416657	.	-	0	ID=GCA000153685_02279;Name=putative lipid II flippase FtsW;locus_tag=GCA000153685_02279;product=putative lipid II flippase FtsW;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0015648,GO:0016020,GO:0032153,GO:0051301,GO:0071555;gene=ftsW;Parent=GCA000153685_02279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03588,RefSeq:WP_003411165.1,SO:0001217,UniParc:UPI000012AD39,UniRef:UniRef100_P9WN97,UniRef:UniRef50_P9WN97,UniRef:UniRef90_P9WN97;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	2416669	2418138	.	-	.	ID=GCA000153685_02280_gene;locus_tag=GCA000153685_02280;gene=murD
contig_1	Pyrodigal	CDS	2416669	2418138	.	-	0	ID=GCA000153685_02280;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000153685_02280;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000153685_02280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F629E,UniRef:UniRef100_A0A0T9DZ55,UniRef:UniRef50_P9WJL5,UniRef:UniRef90_P9WJL5;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	2418131	2419210	.	-	.	ID=GCA000153685_02281_gene;locus_tag=GCA000153685_02281;gene=mraY
contig_1	Pyrodigal	CDS	2418131	2419210	.	-	0	ID=GCA000153685_02281;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000153685_02281;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000153685_02281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K01000,RefSeq:WP_003411171.1,SO:0001217,UniParc:UPI000012F51F,UniRef:UniRef100_P9WMW7,UniRef:UniRef50_P9WMW7,UniRef:UniRef90_P9WMW7;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	2419207	2420739	.	-	.	ID=GCA000153685_02282_gene;locus_tag=GCA000153685_02282;gene=murF
contig_1	Pyrodigal	CDS	2419207	2420739	.	-	0	ID=GCA000153685_02282;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000153685_02282;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008766,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000153685_02282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01929,RefSeq:WP_003411187.1,SO:0001217,UniParc:UPI000012F9BE,UniRef:UniRef100_P9WJL1,UniRef:UniRef50_P9WJL1,UniRef:UniRef90_P9WJL1;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	2420736	2422289	.	-	.	ID=GCA000153685_02283_gene;locus_tag=GCA000153685_02283;gene=murE
contig_1	Pyrodigal	CDS	2420736	2422289	.	-	0	ID=GCA000153685_02283;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;locus_tag=GCA000153685_02283;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0005886,GO:0008360,GO:0008765,GO:0009058,GO:0009252,GO:0016881,GO:0051301,GO:0071555;gene=murE;Parent=GCA000153685_02283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D31605,UniRef:UniRef100_A0A0H3LEZ6,UniRef:UniRef50_P9WJL3,UniRef:UniRef90_P9WJL3;ec_number=6.3.2.13
contig_1	Pyrodigal	gene	2422366	2423400	.	-	.	ID=GCA000153685_02284_gene;locus_tag=GCA000153685_02284
contig_1	Pyrodigal	CDS	2422366	2423400	.	-	0	ID=GCA000153685_02284;Name=Alkyl hydroperoxide reductase Rv2159c;locus_tag=GCA000153685_02284;product=Alkyl hydroperoxide reductase Rv2159c;Dbxref=GO:0005886,GO:0009274,GO:0051920;Parent=GCA000153685_02284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899194.1,SO:0001217,UniParc:UPI000004A961,UniRef:UniRef100_O06218,UniRef:UniRef50_O06218,UniRef:UniRef90_O06218;ec_number=1.11.1.-
contig_1	Pyrodigal	gene	2423397	2423675	.	-	.	ID=GCA000153685_02285_gene;locus_tag=GCA000153685_02285
contig_1	Pyrodigal	CDS	2423397	2423675	.	-	0	ID=GCA000153685_02285;Name=Tetracyclin repressor-like C-terminal domain-containing protein;locus_tag=GCA000153685_02285;product=Tetracyclin repressor-like C-terminal domain-containing protein;Parent=GCA000153685_02285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F62A2,UniRef:UniRef100_A0AB33SSD6,UniRef:UniRef50_Q79FG9,UniRef:UniRef90_Q79FG9
contig_1	Pyrodigal	gene	2424006	2424872	.	-	.	ID=GCA000153685_02286_gene;locus_tag=GCA000153685_02286
contig_1	Pyrodigal	CDS	2424006	2424872	.	-	0	ID=GCA000153685_02286;Name=Luciferase-like domain-containing protein;locus_tag=GCA000153685_02286;product=Luciferase-like domain-containing protein;Parent=GCA000153685_02286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411201.1,SO:0001217,UniParc:UPI00000D1046,UniRef:UniRef100_O06216,UniRef:UniRef50_A0A7Z7ILL4,UniRef:UniRef90_A0A9P2H8P2
contig_1	Pyrodigal	gene	2424975	2426573	.	-	.	ID=GCA000153685_02287_gene;locus_tag=GCA000153685_02287
contig_1	Pyrodigal	CDS	2424975	2426573	.	-	0	ID=GCA000153685_02287;Name=PE-PGRS family protein PE_PGRS38;locus_tag=GCA000153685_02287;product=PE-PGRS family protein PE_PGRS38;Parent=GCA000153685_02287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009939865.1,SO:0001217,UniParc:UPI00000D5EC6,UniRef:UniRef100_L7N6A1,UniRef:UniRef50_A0A9N7LS35,UniRef:UniRef90_L7N6A1
contig_1	Pyrodigal	gene	2426783	2428603	.	-	.	ID=GCA000153685_02288_gene;locus_tag=GCA000153685_02288;gene=pbpB
contig_1	Pyrodigal	CDS	2426783	2428603	.	-	0	ID=GCA000153685_02288;Name=Penicillin-binding protein PbpB;locus_tag=GCA000153685_02288;product=Penicillin-binding protein PbpB;Dbxref=GO:0005886,GO:0008360,GO:0008658,GO:0009252,GO:0071555;gene=pbpB;Parent=GCA000153685_02288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE664,UniRef:UniRef100_A0A0E8WZ77,UniRef:UniRef50_L0T911,UniRef:UniRef90_L0T911
contig_1	Pyrodigal	gene	2428819	2429973	.	-	.	ID=GCA000153685_02289_gene;locus_tag=GCA000153685_02289
contig_1	Pyrodigal	CDS	2428819	2429973	.	-	0	ID=GCA000153685_02289;Name=Proline rich membrane protein;locus_tag=GCA000153685_02289;product=Proline rich membrane protein;Parent=GCA000153685_02289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899197.1,SO:0001217,UniParc:UPI00000D10F7,UniRef:UniRef100_A0A0H3LBT9,UniRef:UniRef50_J9WB12,UniRef:UniRef90_A0A0H3LBT9
contig_1	Pyrodigal	gene	2429970	2431004	.	-	.	ID=GCA000153685_02290_gene;locus_tag=GCA000153685_02290;gene=rsmH
contig_1	Pyrodigal	CDS	2429970	2431004	.	-	0	ID=GCA000153685_02290;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000153685_02290;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0005886,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000153685_02290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03438,SO:0001217,UniParc:UPI000012F4F0,UniRef:UniRef100_A0A0H3LHQ0,UniRef:UniRef50_A0R024,UniRef:UniRef90_P9WJP1;ec_number=2.1.1.199
contig_1	Infernal	regulatory_region	2431055	2431158	2.5e-13	-	.	ID=FNJOPAJJMO_77;Name=mraW RNA;product=mraW RNA;Dbxref=RFAM:RF01746;inference=profile:Rfam:RF01746;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2431162	2431593	.	-	.	ID=GCA000153685_02291_gene;locus_tag=GCA000153685_02291;gene=mraZ
contig_1	Pyrodigal	CDS	2431162	2431593	.	-	0	ID=GCA000153685_02291;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000153685_02291;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000153685_02291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_003411225.1,SO:0001217,UniParc:UPI000012F549,UniRef:UniRef100_P9WJN9,UniRef:UniRef50_P9WJN9,UniRef:UniRef90_P9WJN9
contig_1	Pyrodigal	gene	2431942	2432346	.	-	.	ID=GCA000153685_02292_gene;locus_tag=GCA000153685_02292
contig_1	Pyrodigal	CDS	2431942	2432346	.	-	0	ID=GCA000153685_02292;Name=Transmembrane protein;locus_tag=GCA000153685_02292;product=Transmembrane protein;Parent=GCA000153685_02292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411231.1,SO:0001217,UniParc:UPI00000318DC,UniRef:UniRef100_A5U4J6,UniRef:UniRef50_G8RNZ1,UniRef:UniRef90_R4M776
contig_1	Pyrodigal	gene	2432612	2433232	.	+	.	ID=GCA000153685_02293_gene;locus_tag=GCA000153685_02293
contig_1	Pyrodigal	CDS	2432612	2433232	.	+	0	ID=GCA000153685_02293;Name=GCN5-like protein acetyltransferase Rv2170;locus_tag=GCA000153685_02293;product=GCN5-like protein acetyltransferase Rv2170;Dbxref=GO:0016747,GO:0046677;Parent=GCA000153685_02293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411235.1,SO:0001217,UniParc:UPI00000D1062,UniRef:UniRef100_O53504,UniRef:UniRef50_O53504,UniRef:UniRef90_O53504;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2433328	2434011	.	+	.	ID=GCA000153685_02294_gene;locus_tag=GCA000153685_02294;gene=lppM
contig_1	Pyrodigal	CDS	2433328	2434011	.	+	0	ID=GCA000153685_02294;Name=lipoprotein LppM;locus_tag=GCA000153685_02294;product=lipoprotein LppM;Dbxref=GO:0005576,GO:0008289,GO:0009274,GO:0016020,GO:0052170;gene=lppM;Parent=GCA000153685_02294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411238,RefSeq:WP_003411238.1,SO:0001217,UniParc:UPI00001652D4,UniRef:UniRef100_O53505,UniRef:UniRef50_O53505,UniRef:UniRef90_O53505
contig_1	Pyrodigal	gene	2434008	2434913	.	-	.	ID=GCA000153685_02295_gene;locus_tag=GCA000153685_02295
contig_1	Pyrodigal	CDS	2434008	2434913	.	-	0	ID=GCA000153685_02295;Name=5%2C10-methylenetetrahydrofolate reductase;locus_tag=GCA000153685_02295;product=5%2C10-methylenetetrahydrofolate reductase;Parent=GCA000153685_02295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411241.1,SO:0001217,UniParc:UPI00001652D5,UniRef:UniRef100_O53506,UniRef:UniRef50_A0A1B8SF62,UniRef:UniRef90_Q7D7F2
contig_1	Pyrodigal	gene	2435290	2436282	.	+	.	ID=GCA000153685_02296_gene;locus_tag=GCA000153685_02296;gene=idsA2
contig_1	Pyrodigal	CDS	2435290	2436282	.	+	0	ID=GCA000153685_02296;Name=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;locus_tag=GCA000153685_02296;product=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;Dbxref=GO:0004161,GO:0004337,GO:0004659,GO:0008299,GO:0033384,GO:0046872;gene=idsA2;Parent=GCA000153685_02296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E326A5,UniRef:UniRef100_O53507,UniRef:UniRef50_O53507,UniRef:UniRef90_O53507;ec_number=2.5.1.10
contig_1	Pyrodigal	gene	2436286	2437836	.	+	.	ID=GCA000153685_02297_gene;locus_tag=GCA000153685_02297;gene=mptA
contig_1	Pyrodigal	CDS	2436286	2437836	.	+	0	ID=GCA000153685_02297;Name=alpha-(1->6)-mannopyranosyltransferase A;locus_tag=GCA000153685_02297;product=alpha-(1->6)-mannopyranosyltransferase A;Dbxref=GO:0000030,GO:0009247,GO:0016020;gene=mptA;Parent=GCA000153685_02297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899200.1,SO:0001217,UniParc:UPI00000D4FA2,UniRef:UniRef100_O53508,UniRef:UniRef50_O53508,UniRef:UniRef90_O53508;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2437823	2438287	.	-	.	ID=GCA000153685_02298_gene;locus_tag=GCA000153685_02298
contig_1	Pyrodigal	CDS	2437823	2438287	.	-	0	ID=GCA000153685_02298;Name=DNA-binding protein Rv2175c;locus_tag=GCA000153685_02298;product=DNA-binding protein Rv2175c;Dbxref=GO:0003677;Parent=GCA000153685_02298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB7E,UniRef:UniRef100_O53509,UniRef:UniRef50_O53509,UniRef:UniRef90_O53509
contig_1	Pyrodigal	gene	2438345	2439517	.	+	.	ID=GCA000153685_02299_gene;locus_tag=GCA000153685_02299;gene=pknL
contig_1	Pyrodigal	CDS	2438345	2439517	.	+	0	ID=GCA000153685_02299;Name=Serine/threonine-protein kinase PknL;locus_tag=GCA000153685_02299;product=Serine/threonine-protein kinase PknL;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045717,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknL;Parent=GCA000153685_02299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00039DF268,UniRef:UniRef100_A0A0E7ZRG1,UniRef:UniRef50_P9WI63,UniRef:UniRef90_P9WI63;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	2439659	2440324	.	-	.	ID=GCA000153685_02300_gene;locus_tag=GCA000153685_02300
contig_1	Pyrodigal	CDS	2439659	2440324	.	-	0	ID=GCA000153685_02300;Name=IS110 family transposase;locus_tag=GCA000153685_02300;product=IS110 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_02300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899203.1,SO:0001217,UniParc:UPI00000D5F70,UniRef:UniRef100_O53511,UniRef:UniRef50_A0A654ZRH7,UniRef:UniRef90_O53511
contig_1	Pyrodigal	gene	2440709	2442097	.	-	.	ID=GCA000153685_02301_gene;locus_tag=GCA000153685_02301;gene=aroG
contig_1	Pyrodigal	CDS	2440709	2442097	.	-	0	ID=GCA000153685_02301;Name=class II 3-deoxy-7-phosphoheptulonate synthase;locus_tag=GCA000153685_02301;product=class II 3-deoxy-7-phosphoheptulonate synthase;Dbxref=GO:0003849,GO:0005829,GO:0005886,GO:0008652,GO:0009073,GO:0009274,GO:0009423,GO:0030145,GO:0051260;gene=aroG;Parent=GCA000153685_02301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3200,COG:E,KEGG:K01626,RefSeq:WP_003411323.1,SO:0001217,UniParc:UPI00001A90B7,UniRef:UniRef100_A0A1R3Y0C5,UniRef:UniRef50_O53512,UniRef:UniRef90_O53512;ec_number=2.5.1.54
contig_1	Pyrodigal	gene	2442188	2442694	.	-	.	ID=GCA000153685_02302_gene;locus_tag=GCA000153685_02302
contig_1	Pyrodigal	CDS	2442188	2442694	.	-	0	ID=GCA000153685_02302;Name=polyadenylate-specific 3'-exoribonuclease AS;locus_tag=GCA000153685_02302;product=polyadenylate-specific 3'-exoribonuclease AS;Dbxref=GO:0000287,GO:0003676,GO:0004532,GO:0008408,GO:0042802;Parent=GCA000153685_02302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411331.1,SO:0001217,UniParc:UPI00000D1171,UniRef:UniRef100_P9WJ73,UniRef:UniRef50_P9WJ73,UniRef:UniRef90_P9WJ73;ec_number=3.1.13.-
contig_1	Pyrodigal	gene	2442704	2443642	.	-	.	ID=GCA000153685_02303_gene;locus_tag=GCA000153685_02303
contig_1	Pyrodigal	CDS	2442704	2443642	.	-	0	ID=GCA000153685_02303;Name=Integral membrane protein;locus_tag=GCA000153685_02303;product=Integral membrane protein;Parent=GCA000153685_02303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4FA4,UniRef:UniRef100_Q7D7E5,UniRef:UniRef50_A0A1A3BZF0,UniRef:UniRef90_R4LZ78
contig_1	Pyrodigal	gene	2443679	2444962	.	+	.	ID=GCA000153685_02304_gene;locus_tag=GCA000153685_02304
contig_1	Pyrodigal	CDS	2443679	2444962	.	+	0	ID=GCA000153685_02304;Name=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;locus_tag=GCA000153685_02304;product=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;Dbxref=GO:0005886,GO:0008654,GO:0016758,GO:0046488;Parent=GCA000153685_02304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411339,KEGG:K13671,RefSeq:WP_003411339.1,SO:0001217,UniParc:UPI00000D5FD6,UniRef:UniRef100_P9WMZ9,UniRef:UniRef50_P9WMZ9,UniRef:UniRef90_P9WMZ9;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2444963	2445706	.	-	.	ID=GCA000153685_02305_gene;locus_tag=GCA000153685_02305
contig_1	Pyrodigal	CDS	2444963	2445706	.	-	0	ID=GCA000153685_02305;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA000153685_02305;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;Parent=GCA000153685_02305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411341.1,SO:0001217,UniParc:UPI00000D6053,UniRef:UniRef100_O53516,UniRef:UniRef50_A0A5P9PIS1,UniRef:UniRef90_A0A447GFV5
contig_1	Pyrodigal	gene	2445792	2446187	.	-	.	ID=GCA000153685_02306_gene;locus_tag=GCA000153685_02306
contig_1	Pyrodigal	CDS	2445792	2446187	.	-	0	ID=GCA000153685_02306;Name=Conserved protein;locus_tag=GCA000153685_02306;product=Conserved protein;Parent=GCA000153685_02306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411344.1,SO:0001217,UniParc:UPI00001652D8,UniRef:UniRef100_O53517,UniRef:UniRef50_I4BKX7,UniRef:UniRef90_O53517
contig_1	Pyrodigal	gene	2446184	2447320	.	-	.	ID=GCA000153685_02307_gene;locus_tag=GCA000153685_02307
contig_1	Pyrodigal	CDS	2446184	2447320	.	-	0	ID=GCA000153685_02307;Name=Protein Rv2184c;locus_tag=GCA000153685_02307;product=Protein Rv2184c;Dbxref=GO:0005524,GO:0016887;Parent=GCA000153685_02307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01551,SO:0001217,UniParc:UPI00039F64B3,UniRef:UniRef100_A0A0E8NMQ0,UniRef:UniRef50_O53518,UniRef:UniRef90_O53518;ec_number=7.3.2.7
contig_1	Pyrodigal	gene	2447443	2447877	.	-	.	ID=GCA000153685_02308_gene;locus_tag=GCA000153685_02308
contig_1	Pyrodigal	CDS	2447443	2447877	.	-	0	ID=GCA000153685_02308;Name=Conserved protein TB16-3;locus_tag=GCA000153685_02308;product=Conserved protein TB16-3;Parent=GCA000153685_02308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411354.1,SO:0001217,UniParc:UPI000003326A,UniRef:UniRef100_O53519,UniRef:UniRef50_O53519,UniRef:UniRef90_O53519
contig_1	Pyrodigal	gene	2447982	2448371	.	-	.	ID=GCA000153685_02309_gene;locus_tag=GCA000153685_02309
contig_1	Pyrodigal	CDS	2447982	2448371	.	-	0	ID=GCA000153685_02309;Name=Polyketide cyclase / dehydrase and lipid transport;locus_tag=GCA000153685_02309;product=Polyketide cyclase / dehydrase and lipid transport;Parent=GCA000153685_02309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411357.1,SO:0001217,UniParc:UPI00000D11D2,UniRef:UniRef100_O53520,UniRef:UniRef50_R7WS60,UniRef:UniRef90_O53520
contig_1	Pyrodigal	gene	2448537	2450339	.	+	.	ID=GCA000153685_02310_gene;locus_tag=GCA000153685_02310;gene=fadD15
contig_1	Pyrodigal	CDS	2448537	2450339	.	+	0	ID=GCA000153685_02310;Name=Long-chain-fatty-acid--CoA ligase FadD15;locus_tag=GCA000153685_02310;product=Long-chain-fatty-acid--CoA ligase FadD15;Dbxref=GO:0001676,GO:0004467,GO:0005524,GO:0005886,GO:0006633,GO:0008610,GO:0009274,GO:0016405,GO:0071766;gene=fadD15;Parent=GCA000153685_02310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003906768.1,SO:0001217,UniParc:UPI00001652DA,UniRef:UniRef100_O53521,UniRef:UniRef50_O53521,UniRef:UniRef90_O53521;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	2450370	2451527	.	-	.	ID=GCA000153685_02311_gene;locus_tag=GCA000153685_02311;gene=pimB
contig_1	Pyrodigal	CDS	2450370	2451527	.	-	0	ID=GCA000153685_02311;Name=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;locus_tag=GCA000153685_02311;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;Dbxref=GO:0000030,GO:0005886,GO:0008654,GO:0009247,GO:0016757,GO:0033164,GO:0043750,GO:0046488;gene=pimB;Parent=GCA000153685_02311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411369,BlastRules:WP_014877983,RefSeq:WP_003411369.1,SO:0001217,UniParc:UPI00001650C9,UniRef:UniRef100_P9WMZ3,UniRef:UniRef50_Q8NNK8,UniRef:UniRef90_P9WMZ3;ec_number=2.4.1.346
contig_1	Pyrodigal	gene	2451624	2452367	.	-	.	ID=GCA000153685_02312_gene;locus_tag=GCA000153685_02312
contig_1	Pyrodigal	CDS	2451624	2452367	.	-	0	ID=GCA000153685_02312;Name=DUF4157 domain-containing protein;locus_tag=GCA000153685_02312;product=DUF4157 domain-containing protein;Parent=GCA000153685_02312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000F0D03A,UniRef:UniRef100_A0A9P1LE39,UniRef:UniRef50_A0A1A3Q662,UniRef:UniRef90_O53523
contig_1	Pyrodigal	gene	2452492	2453673	.	-	.	ID=GCA000153685_02313_gene;locus_tag=GCA000153685_02313;gene=ripC
contig_1	Pyrodigal	CDS	2452492	2453673	.	-	0	ID=GCA000153685_02313;Name=peptidoglycan hydrolase RipC;locus_tag=GCA000153685_02313;product=peptidoglycan hydrolase RipC;Dbxref=GO:0006508,GO:0008234;gene=ripC;Parent=GCA000153685_02313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015456A7,UniRef:UniRef100_A0A0E8W431,UniRef:UniRef50_P9WHU3,UniRef:UniRef90_P9WHU3;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	2453835	2454113	.	-	.	ID=GCA000153685_02314_gene;locus_tag=GCA000153685_02314;pseudogene=unitary
contig_1	Pyrodigal	CDS	2453835	2454113	.	-	0	ID=GCA000153685_02314;Name=hypothetical protein;locus_tag=GCA000153685_02314;product=hypothetical protein;pseudogene=unitary;Parent=GCA000153685_02314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908818.1,SO:0001217,UniParc:UPI00000D2CA0,UniRef:UniRef100_Q8VJP4,UniRef:UniRef50_Q8VJP4,UniRef:UniRef90_Q8VJP4
contig_1	Pyrodigal	gene	2454190	2456133	.	+	.	ID=GCA000153685_02315_gene;locus_tag=GCA000153685_02315
contig_1	Pyrodigal	CDS	2454190	2456133	.	+	0	ID=GCA000153685_02315;Name=DEDD exonuclease domain-containing protein;locus_tag=GCA000153685_02315;product=DEDD exonuclease domain-containing protein;Dbxref=GO:0003677,GO:0003887,GO:0004519,GO:0004527,GO:0005829,GO:0005886,GO:0006260,GO:0006289,GO:0006974,GO:0009274,GO:0009380;Parent=GCA000153685_02315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF4860,UniRef:UniRef100_A0A0H3LAW9,UniRef:UniRef50_P9WLJ1,UniRef:UniRef90_P9WLJ1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2456008	2457051	.	-	.	ID=GCA000153685_02316_gene;locus_tag=GCA000153685_02316
contig_1	Pyrodigal	CDS	2456008	2457051	.	-	0	ID=GCA000153685_02316;Name=Anthranilate phosphoribosyltransferase;locus_tag=GCA000153685_02316;product=Anthranilate phosphoribosyltransferase;Parent=GCA000153685_02316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00766,SO:0001217,UniParc:UPI00001650CC,UniRef:UniRef100_A0A0E8W551,UniRef:UniRef50_P9WFX5,UniRef:UniRef90_A0A1X2LXA1;ec_number=2.4.2.18
contig_1	Pyrodigal	gene	2457347	2457889	.	+	.	ID=GCA000153685_02317_gene;locus_tag=GCA000153685_02317;gene=ctaE
contig_1	Pyrodigal	CDS	2457347	2457889	.	+	0	ID=GCA000153685_02317;Name=putative cytochrome c oxidase subunit 3;locus_tag=GCA000153685_02317;product=putative cytochrome c oxidase subunit 3;Dbxref=GO:0004129,GO:0005886,GO:0009060,GO:0019646;gene=ctaE;Parent=GCA000153685_02317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1845,SO:0001217,UniParc:UPI000169CD79,UniRef:UniRef100_P9WP67,UniRef:UniRef50_Q9AEL8,UniRef:UniRef90_P9WP67;ec_number=7.1.1.9
contig_1	Pyrodigal	gene	2457930	2458772	.	+	.	ID=GCA000153685_02318_gene;locus_tag=GCA000153685_02318;gene=qcrC
contig_1	Pyrodigal	CDS	2457930	2458772	.	+	0	ID=GCA000153685_02318;Name=Cytochrome bc1 complex cytochrome c subunit;locus_tag=GCA000153685_02318;product=Cytochrome bc1 complex cytochrome c subunit;Dbxref=GO:0005506,GO:0005886,GO:0008121,GO:0020037;gene=qcrC;Parent=GCA000153685_02318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03889,RefSeq:WP_003411392.1,SO:0001217,UniParc:UPI0000132E57,UniRef:UniRef100_P9WP35,UniRef:UniRef50_Q8NNK5,UniRef:UniRef90_P9WP35;ec_number=7.1.1.8
contig_1	Pyrodigal	gene	2458769	2460058	.	+	.	ID=GCA000153685_02319_gene;locus_tag=GCA000153685_02319;gene=qcrA
contig_1	Pyrodigal	CDS	2458769	2460058	.	+	0	ID=GCA000153685_02319;Name=Cytochrome bc1 complex Rieske iron-sulfur subunit;locus_tag=GCA000153685_02319;product=Cytochrome bc1 complex Rieske iron-sulfur subunit;Dbxref=GO:0005886,GO:0009274,GO:0016491,GO:0046872,GO:0051537;gene=qcrA;Parent=GCA000153685_02319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03890,RefSeq:WP_003411396.1,SO:0001217,UniParc:UPI0000132E4D,UniRef:UniRef100_P9WH23,UniRef:UniRef50_Q79VE8,UniRef:UniRef90_P9WH23;ec_number=7.1.1.8
contig_1	Pyrodigal	gene	2460055	2461704	.	+	.	ID=GCA000153685_02320_gene;locus_tag=GCA000153685_02320;gene=qcrB
contig_1	Pyrodigal	CDS	2460055	2461704	.	+	0	ID=GCA000153685_02320;Name=Cytochrome bc1 complex cytochrome b subunit;locus_tag=GCA000153685_02320;product=Cytochrome bc1 complex cytochrome b subunit;Dbxref=GO:0005886,GO:0008121,GO:0016020,GO:0022904,GO:0046872;gene=qcrB;Parent=GCA000153685_02320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1290,KEGG:K03891,RefSeq:WP_003899212.1,SO:0001217,UniParc:UPI0000132E52,UniRef:UniRef100_P9WP37,UniRef:UniRef50_P9WP37,UniRef:UniRef90_P9WP37;ec_number=7.1.1.8
contig_1	Pyrodigal	gene	2461824	2462468	.	-	.	ID=GCA000153685_02321_gene;locus_tag=GCA000153685_02321
contig_1	Pyrodigal	CDS	2461824	2462468	.	-	0	ID=GCA000153685_02321;Name=putative protein Rv2197c;locus_tag=GCA000153685_02321;product=putative protein Rv2197c;Dbxref=GO:0005886;Parent=GCA000153685_02321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899213.1,SO:0001217,UniParc:UPI000013B7E9,UniRef:UniRef100_P9WLI9,UniRef:UniRef50_P9WLI9,UniRef:UniRef90_P9WLI9
contig_1	Pyrodigal	gene	2462468	2463367	.	-	.	ID=GCA000153685_02322_gene;locus_tag=GCA000153685_02322;gene=mmpS3
contig_1	Pyrodigal	CDS	2462468	2463367	.	-	0	ID=GCA000153685_02322;Name=putative transport accessory protein MmpS3;locus_tag=GCA000153685_02322;product=putative transport accessory protein MmpS3;Dbxref=GO:0005886,GO:0009274;gene=mmpS3;Parent=GCA000153685_02322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411405.1,SO:0001217,UniParc:UPI000012F28D,UniRef:UniRef100_P9WJT1,UniRef:UniRef50_P9WJT1,UniRef:UniRef90_P9WJT1
contig_1	Pyrodigal	gene	2463553	2463972	.	-	.	ID=GCA000153685_02323_gene;locus_tag=GCA000153685_02323;gene=ctaF
contig_1	Pyrodigal	CDS	2463553	2463972	.	-	0	ID=GCA000153685_02323;Name=putative cytochrome c oxidase polypeptide 4;locus_tag=GCA000153685_02323;product=putative cytochrome c oxidase polypeptide 4;Dbxref=GO:0004129,GO:0005886,GO:0022900;gene=ctaF;Parent=GCA000153685_02323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411408.1,SO:0001217,UniParc:UPI000013B7EA,UniRef:UniRef100_P9WP45,UniRef:UniRef50_P9WP45,UniRef:UniRef90_P9WP45;ec_number=7.1.1.9
contig_1	Pyrodigal	gene	2463980	2464966	.	-	.	ID=GCA000153685_02324_gene;locus_tag=GCA000153685_02324;gene=ctaC
contig_1	Pyrodigal	CDS	2463980	2464966	.	-	0	ID=GCA000153685_02324;Name=Cytochrome c oxidase subunit 2;locus_tag=GCA000153685_02324;product=Cytochrome c oxidase subunit 2;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0042773;gene=ctaC;Parent=GCA000153685_02324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02275,SO:0001217,UniParc:UPI00005EE675,UniRef:UniRef100_P9WP69,UniRef:UniRef50_P9WP69,UniRef:UniRef90_P9WP69;ec_number=7.1.1.9
contig_1	Pyrodigal	gene	2465317	2467275	.	+	.	ID=GCA000153685_02325_gene;locus_tag=GCA000153685_02325;gene=asnB
contig_1	Pyrodigal	CDS	2465317	2467275	.	+	0	ID=GCA000153685_02325;Name=asparagine synthase (glutamine-hydrolyzing);locus_tag=GCA000153685_02325;product=asparagine synthase (glutamine-hydrolyzing);Dbxref=GO:0004066,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006529,GO:0070981;gene=asnB;Parent=GCA000153685_02325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411413.1,SO:0001217,UniParc:UPI0000126124,UniRef:UniRef100_P9WN33,UniRef:UniRef50_P9WN33,UniRef:UniRef90_P9WN33;ec_number=6.3.5.4
contig_1	Pyrodigal	gene	2467373	2468347	.	-	.	ID=GCA000153685_02326_gene;locus_tag=GCA000153685_02326;gene=adoK
contig_1	Pyrodigal	CDS	2467373	2468347	.	-	0	ID=GCA000153685_02326;Name=Adenosine kinase;locus_tag=GCA000153685_02326;product=Adenosine kinase;Dbxref=GO:0000287,GO:0004001,GO:0005524,GO:0005525,GO:0005886,GO:0006166,GO:0032567,GO:0044209;gene=adoK;Parent=GCA000153685_02326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,RefSeq:WP_003411414.1,SO:0001217,UniParc:UPI000013B87E,UniRef:UniRef100_P9WID5,UniRef:UniRef50_P9WID5,UniRef:UniRef90_P9WID5;ec_number=2.7.1.20
contig_1	Pyrodigal	gene	2468551	2469243	.	+	.	ID=GCA000153685_02327_gene;locus_tag=GCA000153685_02327
contig_1	Pyrodigal	CDS	2468551	2469243	.	+	0	ID=GCA000153685_02327;Name=putative protein MT2259;locus_tag=GCA000153685_02327;product=putative protein MT2259;Dbxref=GO:0016020;Parent=GCA000153685_02327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411415.1,SO:0001217,UniParc:UPI000013B881,UniRef:UniRef100_P9WLI7,UniRef:UniRef50_P9WLI7,UniRef:UniRef90_P9WLI7
contig_1	Pyrodigal	gene	2469251	2469607	.	-	.	ID=GCA000153685_02328_gene;locus_tag=GCA000153685_02328;gene=iscA
contig_1	Pyrodigal	CDS	2469251	2469607	.	-	0	ID=GCA000153685_02328;Name=Protein Rv2204c;locus_tag=GCA000153685_02328;product=Protein Rv2204c;Dbxref=GO:0005506,GO:0005886,GO:0016226,GO:0051537,GO:0051539,GO:0106035;gene=iscA;Parent=GCA000153685_02328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_003411418.1,SO:0001217,UniParc:UPI000013B882,UniRef:UniRef100_P9WMN5,UniRef:UniRef50_P9WMN5,UniRef:UniRef90_P9WMN5
contig_1	Pyrodigal	gene	2469707	2470852	.	-	.	ID=GCA000153685_02329_gene;locus_tag=GCA000153685_02329
contig_1	Pyrodigal	CDS	2469707	2470852	.	-	0	ID=GCA000153685_02329;Name=putative protein Rv2205c;locus_tag=GCA000153685_02329;product=putative protein Rv2205c;Dbxref=GO:0008887,GO:0009274,GO:0031388;Parent=GCA000153685_02329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00865,SO:0001217,UniParc:UPI00001650CD,UniRef:UniRef100_P9WMT7,UniRef:UniRef50_P9WMT7,UniRef:UniRef90_P9WMT7;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	2471158	2471652	.	+	.	ID=GCA000153685_02330_gene;locus_tag=GCA000153685_02330
contig_1	Pyrodigal	CDS	2471158	2471652	.	+	0	ID=GCA000153685_02330;Name=putative protein Rv2206;locus_tag=GCA000153685_02330;product=putative protein Rv2206;Dbxref=GO:0005886,GO:0042783;Parent=GCA000153685_02330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE676,UniRef:UniRef100_A0A0H3LHS8,UniRef:UniRef50_P9WLI5,UniRef:UniRef90_P9WLI5
contig_1	Pyrodigal	gene	2471731	2472816	.	+	.	ID=GCA000153685_02331_gene;locus_tag=GCA000153685_02331;gene=cobT
contig_1	Pyrodigal	CDS	2471731	2472816	.	+	0	ID=GCA000153685_02331;Name=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;locus_tag=GCA000153685_02331;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;Dbxref=GO:0008939,GO:0009236;gene=cobT;Parent=GCA000153685_02331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00768,RefSeq:WP_003411429.1,SO:0001217,UniParc:UPI0000127E08,UniRef:UniRef100_P9WP85,UniRef:UniRef50_P9WP85,UniRef:UniRef90_P9WP85;ec_number=2.4.2.21
contig_1	Pyrodigal	gene	2472816	2473562	.	+	.	ID=GCA000153685_02332_gene;locus_tag=GCA000153685_02332;gene=cobS
contig_1	Pyrodigal	CDS	2472816	2473562	.	+	0	ID=GCA000153685_02332;Name=adenosylcobinamide-GDP ribazoletransferase;locus_tag=GCA000153685_02332;product=adenosylcobinamide-GDP ribazoletransferase;Dbxref=GO:0005886,GO:0008818,GO:0009236,GO:0051073;gene=cobS;Parent=GCA000153685_02332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02233,SO:0001217,UniParc:UPI0001278106,UniRef:UniRef100_P9WP91,UniRef:UniRef50_P9WP91,UniRef:UniRef90_P9WP91;ec_number=2.7.8.26
contig_1	Pyrodigal	gene	2473720	2475258	.	+	.	ID=GCA000153685_02333_gene;locus_tag=GCA000153685_02333
contig_1	Pyrodigal	CDS	2473720	2475258	.	+	0	ID=GCA000153685_02333;Name=putative protein Rv2209;locus_tag=GCA000153685_02333;product=putative protein Rv2209;Dbxref=GO:0005886;Parent=GCA000153685_02333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899218.1,SO:0001217,UniParc:UPI000013B892,UniRef:UniRef100_P9WLI3,UniRef:UniRef50_P9WLI3,UniRef:UniRef90_P9WLI3
contig_1	Pyrodigal	gene	2475184	2476290	.	-	.	ID=GCA000153685_02334_gene;locus_tag=GCA000153685_02334;gene=ilvE
contig_1	Pyrodigal	CDS	2475184	2476290	.	-	0	ID=GCA000153685_02334;Name=branched-chain amino acid aminotransferase;locus_tag=GCA000153685_02334;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081,GO:0009082,GO:0009097,GO:0009098,GO:0009099,GO:0018272,GO:0030170,GO:0052655,GO:0052656,GO:0071267;gene=ilvE;Parent=GCA000153685_02334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00826,RefSeq:WP_003411438.1,SO:0001217,UniParc:UPI000012D5A0,UniRef:UniRef100_P9WQ75,UniRef:UniRef50_P9WQ75,UniRef:UniRef90_P9WQ75;ec_number=2.6.1.42
contig_1	Pyrodigal	gene	2476362	2477465	.	-	.	ID=GCA000153685_02335_gene;locus_tag=GCA000153685_02335;gene=gcvT
contig_1	Pyrodigal	CDS	2476362	2477465	.	-	0	ID=GCA000153685_02335;Name=glycine cleavage system aminomethyltransferase GcvT;locus_tag=GCA000153685_02335;product=glycine cleavage system aminomethyltransferase GcvT;Dbxref=GO:0004047,GO:0005737,GO:0005829,GO:0005960,GO:0008483,GO:0019464;gene=gcvT;Parent=GCA000153685_02335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899219.1,SO:0001217,UniParc:UPI000012B362,UniRef:UniRef100_P9WN51,UniRef:UniRef50_P9WN51,UniRef:UniRef90_P9WN51;ec_number=2.1.2.10
contig_1	Pyrodigal	gene	2477480	2478646	.	+	.	ID=GCA000153685_02336_gene;locus_tag=GCA000153685_02336
contig_1	Pyrodigal	CDS	2477480	2478646	.	+	0	ID=GCA000153685_02336;Name=adenylyl cyclase;locus_tag=GCA000153685_02336;product=adenylyl cyclase;Dbxref=GO:0004016,GO:0005504,GO:0006171,GO:0035556;Parent=GCA000153685_02336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411442,SO:0001217,UniParc:UPI00001650CF,UniRef:UniRef100_A0A0E8VIZ8,UniRef:UniRef50_P9WMU7,UniRef:UniRef90_P9WMU7
contig_1	Pyrodigal	gene	2478658	2480205	.	+	.	ID=GCA000153685_02337_gene;locus_tag=GCA000153685_02337;gene=pepA
contig_1	Pyrodigal	CDS	2478658	2480205	.	+	0	ID=GCA000153685_02337;Name=leucyl aminopeptidase;locus_tag=GCA000153685_02337;product=leucyl aminopeptidase;Dbxref=GO:0005737,GO:0006508,GO:0030145,GO:0070006;gene=pepA;Parent=GCA000153685_02337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899220.1,SO:0001217,UniParc:UPI00001259C1,UniRef:UniRef100_P9WHT3,UniRef:UniRef50_P9WHT3,UniRef:UniRef90_P9WHT3;ec_number=3.4.11.1
contig_1	Pyrodigal	gene	2480243	2482021	.	-	.	ID=GCA000153685_02338_gene;locus_tag=GCA000153685_02338;gene=ephD
contig_1	Pyrodigal	CDS	2480243	2482021	.	-	0	ID=GCA000153685_02338;Name=SDR family oxidoreductase;locus_tag=GCA000153685_02338;product=SDR family oxidoreductase;Dbxref=GO:0005829,GO:0005886,GO:0009274,GO:0016491;gene=ephD;Parent=GCA000153685_02338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411445.1,SO:0001217,UniParc:UPI000012A0A3,UniRef:UniRef100_P9WGS3,UniRef:UniRef50_P9WGS3,UniRef:UniRef90_P9WGS3;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2482285	2483946	.	+	.	ID=GCA000153685_02339_gene;locus_tag=GCA000153685_02339;gene=sucB
contig_1	Pyrodigal	CDS	2482285	2483946	.	+	0	ID=GCA000153685_02339;Name=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;locus_tag=GCA000153685_02339;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;Dbxref=GO:0004148,GO:0004149,GO:0004742,GO:0005829,GO:0005886,GO:0006099,GO:0009274,GO:0015036,GO:0016209,GO:0016746,GO:0031405,GO:0045254,GO:0045454,GO:1990748;gene=sucB;Parent=GCA000153685_02339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411450.1,SO:0001217,UniParc:UPI0000130BE5,UniRef:UniRef100_P9WIS7,UniRef:UniRef50_P9WIS7,UniRef:UniRef90_P9WIS7;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	2483946	2484851	.	+	.	ID=GCA000153685_02340_gene;locus_tag=GCA000153685_02340
contig_1	Pyrodigal	CDS	2483946	2484851	.	+	0	ID=GCA000153685_02340;Name=Epimerase family protein Rv2216;locus_tag=GCA000153685_02340;product=Epimerase family protein Rv2216;Dbxref=GO:0005886,GO:0006707,GO:0009274,GO:0020037,GO:0031073,GO:0036199;Parent=GCA000153685_02340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07071,RefSeq:WP_003411454.1,SO:0001217,UniParc:UPI000013B8A5,UniRef:UniRef100_P9WGP7,UniRef:UniRef50_P9WGP7,UniRef:UniRef90_P9WGP7
contig_1	Pyrodigal	gene	2484904	2485596	.	+	.	ID=GCA000153685_02341_gene;locus_tag=GCA000153685_02341;gene=lipB
contig_1	Pyrodigal	CDS	2484904	2485596	.	+	0	ID=GCA000153685_02341;Name=lipoyl(octanoyl) transferase LipB;locus_tag=GCA000153685_02341;product=lipoyl(octanoyl) transferase LipB;Dbxref=GO:0005737,GO:0009249,GO:0033819;gene=lipB;Parent=GCA000153685_02341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411458.1,SO:0001217,UniParc:UPI000012E6F2,UniRef:UniRef100_P9WK83,UniRef:UniRef50_P9WK83,UniRef:UniRef90_P9WK83;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	2485593	2486528	.	+	.	ID=GCA000153685_02342_gene;locus_tag=GCA000153685_02342;gene=lipA
contig_1	Pyrodigal	CDS	2485593	2486528	.	+	0	ID=GCA000153685_02342;Name=lipoyl synthase;locus_tag=GCA000153685_02342;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000153685_02342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_003411460.1,SO:0001217,UniParc:UPI000012E6CB,UniRef:UniRef100_P9WK91,UniRef:UniRef50_P9WK91,UniRef:UniRef90_P9WK91;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	2486555	2487307	.	+	.	ID=GCA000153685_02343_gene;locus_tag=GCA000153685_02343
contig_1	Pyrodigal	CDS	2486555	2487307	.	+	0	ID=GCA000153685_02343;Name=putative protein Rv2219;locus_tag=GCA000153685_02343;product=putative protein Rv2219;Dbxref=GO:0005886;Parent=GCA000153685_02343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411463.1,SO:0001217,UniParc:UPI000013B8B3,UniRef:UniRef100_P9WLI1,UniRef:UniRef50_P9WLI1,UniRef:UniRef90_P9WLI1
contig_1	Pyrodigal	gene	2487314	2487736	.	-	.	ID=GCA000153685_02344_gene;locus_tag=GCA000153685_02344
contig_1	Pyrodigal	CDS	2487314	2487736	.	-	0	ID=GCA000153685_02344;Name=RDD domain-containing protein;locus_tag=GCA000153685_02344;product=RDD domain-containing protein;Parent=GCA000153685_02344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411466.1,SO:0001217,UniParc:UPI00001A90C3,UniRef:UniRef100_Q8VJP3,UniRef:UniRef50_F5Z0W8,UniRef:UniRef90_R4M8K9
contig_1	Pyrodigal	gene	2487935	2489371	.	+	.	ID=GCA000153685_02345_gene;locus_tag=GCA000153685_02345;gene=glnA
contig_1	Pyrodigal	CDS	2487935	2489371	.	+	0	ID=GCA000153685_02345;Name=type I glutamate--ammonia ligase;locus_tag=GCA000153685_02345;product=type I glutamate--ammonia ligase;Dbxref=GO:0000287,GO:0001968,GO:0004356,GO:0005524,GO:0005576,GO:0005737,GO:0005829,GO:0005886,GO:0006542,GO:0009274,GO:0010756,GO:0016020,GO:0019740,GO:0035375,GO:0051260;gene=glnA;Parent=GCA000153685_02345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01915,RefSeq:WP_003411475.1,SO:0001217,UniParc:UPI000012B69B,UniRef:UniRef100_P9WN39,UniRef:UniRef50_P9WN39,UniRef:UniRef90_P9WN39;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	2489689	2492673	.	-	.	ID=GCA000153685_02346_gene;locus_tag=GCA000153685_02346;gene=glnE
contig_1	Pyrodigal	CDS	2489689	2492673	.	-	0	ID=GCA000153685_02346;Name=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;locus_tag=GCA000153685_02346;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;Dbxref=GO:0000287,GO:0000820,GO:0005524,GO:0005829,GO:0008882,GO:0047388;gene=glnE;Parent=GCA000153685_02346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00982,RefSeq:WP_003411478.1,SO:0001217,UniParc:UPI000012B73C,UniRef:UniRef100_P9WN27,UniRef:UniRef50_P9WN27,UniRef:UniRef90_P9WN27;ec_number=2.7.7.89
contig_1	Pyrodigal	gene	2492722	2494062	.	-	.	ID=GCA000153685_02347_gene;locus_tag=GCA000153685_02347;gene=glnA
contig_1	Pyrodigal	CDS	2492722	2494062	.	-	0	ID=GCA000153685_02347;Name=type I glutamate--ammonia ligase;locus_tag=GCA000153685_02347;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0005886,GO:0006542,GO:0046872,GO:0050001;gene=glnA;Parent=GCA000153685_02347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_003411482.1,SO:0001217,UniParc:UPI000012B6B2,UniRef:UniRef100_P9WN37,UniRef:UniRef50_Q9RDS6,UniRef:UniRef90_P9WN37;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	2494157	2495710	.	-	.	ID=GCA000153685_02348_gene;locus_tag=GCA000153685_02348;gene=caeB
contig_1	Pyrodigal	CDS	2494157	2495710	.	-	0	ID=GCA000153685_02348;Name=carboxylesterase CaeB;locus_tag=GCA000153685_02348;product=carboxylesterase CaeB;Dbxref=GO:0005886,GO:0016787;gene=caeB;Parent=GCA000153685_02348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411484,SO:0001217,UniParc:UPI0002F5B8F1,UniRef:UniRef100_P9WHR5,UniRef:UniRef50_P9WHR5,UniRef:UniRef90_P9WHR5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	2495781	2497337	.	-	.	ID=GCA000153685_02349_gene;locus_tag=GCA000153685_02349;gene=caeA
contig_1	Pyrodigal	CDS	2495781	2497337	.	-	0	ID=GCA000153685_02349;Name=carboxylesterase CaeA;locus_tag=GCA000153685_02349;product=carboxylesterase CaeA;Dbxref=GO:0005576,GO:0005829,GO:0005886,GO:0030313,GO:0043687,GO:0052572,GO:0106435;gene=caeA;Parent=GCA000153685_02349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411486,SO:0001217,UniParc:UPI00005EE67A,UniRef:UniRef100_P9WHR3,UniRef:UniRef50_P9WHR3,UniRef:UniRef90_P9WHR3;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	2498062	2498907	.	+	.	ID=GCA000153685_02350_gene;locus_tag=GCA000153685_02350;gene=panB
contig_1	Pyrodigal	CDS	2498062	2498907	.	+	0	ID=GCA000153685_02350;Name=3-methyl-2-oxobutanoate hydroxymethyltransferase;locus_tag=GCA000153685_02350;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;Dbxref=GO:0000287,GO:0003864,GO:0005737,GO:0005886,GO:0015940;gene=panB;Parent=GCA000153685_02350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411489.1,SO:0001217,UniParc:UPI0000131276,UniRef:UniRef100_P9WIL7,UniRef:UniRef50_P9WIL7,UniRef:UniRef90_P9WIL7;ec_number=2.1.2.11
contig_1	Pyrodigal	gene	2499152	2500693	.	+	.	ID=GCA000153685_02351_gene;locus_tag=GCA000153685_02351
contig_1	Pyrodigal	CDS	2499152	2500693	.	+	0	ID=GCA000153685_02351;Name=putative protein Rv2226;locus_tag=GCA000153685_02351;product=putative protein Rv2226;Dbxref=GO:0005829,GO:0005886;Parent=GCA000153685_02351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899224.1,SO:0001217,UniParc:UPI00001650D4,UniRef:UniRef100_P9WLH8,UniRef:UniRef50_P9WLH9,UniRef:UniRef90_P9WLH9
contig_1	Infernal	gene	2500706	2501134	.	-	.	ID=GCA000153685_02352_gene;locus_tag=GCA000153685_02352;gene=RNaseP_bact_a
contig_1	Infernal	ncRNA	2500706	2501134	3e-37	-	.	ID=GCA000153685_02352;Name=Bacterial RNase P class A;locus_tag=GCA000153685_02352;product=Bacterial RNase P class A;Dbxref=RFAM:RF00010;Parent=GCA000153685_02352_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00010
contig_1	Pyrodigal	gene	2501243	2501470	.	+	.	ID=GCA000153685_02353_gene;locus_tag=GCA000153685_02353
contig_1	Pyrodigal	CDS	2501243	2501470	.	+	0	ID=GCA000153685_02353;Name=Prolyl 4-hydroxylase alpha subunit domain-containing protein;locus_tag=GCA000153685_02353;product=Prolyl 4-hydroxylase alpha subunit domain-containing protein;Parent=GCA000153685_02353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2CA3,UniRef:UniRef100_A0A0H3LF47,UniRef:UniRef50_A0A4R1HZ86,UniRef:UniRef90_A0A0H3LF47
contig_1	Pyrodigal	gene	2501467	2501952	.	+	.	ID=GCA000153685_02354_gene;locus_tag=GCA000153685_02354
contig_1	Pyrodigal	CDS	2501467	2501952	.	+	0	ID=GCA000153685_02354;Name=Fe2OG dioxygenase domain-containing protein;locus_tag=GCA000153685_02354;product=Fe2OG dioxygenase domain-containing protein;Parent=GCA000153685_02354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09990,SO:0001217,UniParc:UPI00001650D5,UniRef:UniRef100_A0A0H3LBZ3,UniRef:UniRef50_A0A0H3LBZ3,UniRef:UniRef90_A0A0H3LBZ3
contig_1	Pyrodigal	gene	2501964	2503058	.	-	.	ID=GCA000153685_02355_gene;locus_tag=GCA000153685_02355
contig_1	Pyrodigal	CDS	2501964	2503058	.	-	0	ID=GCA000153685_02355;Name=bifunctional RNase H/acid phosphatase;locus_tag=GCA000153685_02355;product=bifunctional RNase H/acid phosphatase;Dbxref=GO:0003676,GO:0004523,GO:0005737,GO:0016791;Parent=GCA000153685_02355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22316,RefSeq:WP_003899226.1,SO:0001217,UniParc:UPI000013B8D2,UniRef:UniRef100_P9WLH5,UniRef:UniRef50_P9WLH5,UniRef:UniRef90_P9WLH5;ec_number=3.1.3.73
contig_1	Pyrodigal	gene	2503055	2503792	.	-	.	ID=GCA000153685_02356_gene;locus_tag=GCA000153685_02356
contig_1	Pyrodigal	CDS	2503055	2503792	.	-	0	ID=GCA000153685_02356;Name=putative protein Rv2229c;locus_tag=GCA000153685_02356;product=putative protein Rv2229c;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_02356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411501.1,SO:0001217,UniParc:UPI000013B8D6,UniRef:UniRef100_P9WLH3,UniRef:UniRef50_P9WLH3,UniRef:UniRef90_P9WLH3
contig_1	Pyrodigal	gene	2503789	2504928	.	-	.	ID=GCA000153685_02357_gene;locus_tag=GCA000153685_02357
contig_1	Pyrodigal	CDS	2503789	2504928	.	-	0	ID=GCA000153685_02357;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA000153685_02357;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0046872,GO:0051540;Parent=GCA000153685_02357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411502.1,SO:0001217,UniParc:UPI000013B8DE,UniRef:UniRef100_P9WFM1,UniRef:UniRef50_P9WFM1,UniRef:UniRef90_P9WFM1
contig_1	Pyrodigal	gene	2504925	2506019	.	-	.	ID=GCA000153685_02358_gene;locus_tag=GCA000153685_02358;gene=cobC
contig_1	Pyrodigal	CDS	2504925	2506019	.	-	0	ID=GCA000153685_02358;Name=Rv2231c family pyridoxal phosphate-dependent protein CobC;locus_tag=GCA000153685_02358;product=Rv2231c family pyridoxal phosphate-dependent protein CobC;Dbxref=GO:0004400,GO:0005576,GO:0009058,GO:0009236,GO:0030170;gene=cobC;Parent=GCA000153685_02358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411503.1,SO:0001217,UniParc:UPI000013B8E1,UniRef:UniRef100_P9WQ89,UniRef:UniRef50_P9WQ89,UniRef:UniRef90_P9WQ89;ec_number=4.1.1.81
contig_1	Pyrodigal	gene	2506841	2507473	.	+	.	ID=GCA000153685_02359_gene;locus_tag=GCA000153685_02359
contig_1	Pyrodigal	CDS	2506841	2507473	.	+	0	ID=GCA000153685_02359;Name=5'-nucleotidase;locus_tag=GCA000153685_02359;product=5'-nucleotidase;Parent=GCA000153685_02359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B44C35,UniRef:UniRef100_A0A0E8NG93,UniRef:UniRef50_A0A0Q9CT22,UniRef:UniRef90_A0A0E8NG93
contig_1	Pyrodigal	gene	2507466	2507957	.	+	.	ID=GCA000153685_02360_gene;locus_tag=GCA000153685_02360;gene=ptpA
contig_1	Pyrodigal	CDS	2507466	2507957	.	+	0	ID=GCA000153685_02360;Name=protein-tyrosine-phosphatase;locus_tag=GCA000153685_02360;product=protein-tyrosine-phosphatase;Dbxref=GO:0004725,GO:0004726,GO:0005576,GO:0005829,GO:0005886,GO:0030946,GO:0033668,GO:0042025,GO:0044161,GO:0052067,GO:0052170,GO:0140793;gene=ptpA;Parent=GCA000153685_02360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411510,RefSeq:WP_003411510.1,SO:0001217,UniParc:UPI000013298A,UniRef:UniRef100_P9WIA1,UniRef:UniRef50_P9WIA1,UniRef:UniRef90_P9WIA1;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2507957	2508772	.	+	.	ID=GCA000153685_02361_gene;locus_tag=GCA000153685_02361
contig_1	Pyrodigal	CDS	2507957	2508772	.	+	0	ID=GCA000153685_02361;Name=putative SURF1-like protein Mb2259;locus_tag=GCA000153685_02361;product=putative SURF1-like protein Mb2259;Dbxref=GO:0005886;Parent=GCA000153685_02361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14998,RefSeq:WP_003411514.1,SO:0001217,UniParc:UPI000013B8EB,UniRef:UniRef100_P9WGA7,UniRef:UniRef50_P9WGA7,UniRef:UniRef90_P9WGA7
contig_1	Pyrodigal	gene	2508754	2509713	.	-	.	ID=GCA000153685_02362_gene;locus_tag=GCA000153685_02362;gene=cobD
contig_1	Pyrodigal	CDS	2508754	2509713	.	-	0	ID=GCA000153685_02362;Name=cobalamin biosynthesis protein;locus_tag=GCA000153685_02362;product=cobalamin biosynthesis protein;Dbxref=GO:0005576,GO:0005886,GO:0009236,GO:0015420,GO:0048472;gene=cobD;Parent=GCA000153685_02362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02227,SO:0001217,UniParc:UPI00005EE67E,UniRef:UniRef100_A0A0H3LHW3,UniRef:UniRef50_P9WP93,UniRef:UniRef90_P9WP93;ec_number=6.3.1.10
contig_1	Pyrodigal	gene	2509761	2510576	.	+	.	ID=GCA000153685_02363_gene;locus_tag=GCA000153685_02363
contig_1	Pyrodigal	CDS	2509761	2510576	.	+	0	ID=GCA000153685_02363;Name=putative protein Mb2261;locus_tag=GCA000153685_02363;product=putative protein Mb2261;Dbxref=GO:0005886,GO:0016491;Parent=GCA000153685_02363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411520.1,SO:0001217,UniParc:UPI00001650D8,UniRef:UniRef100_P9WLH1,UniRef:UniRef50_P9WLH1,UniRef:UniRef90_P9WLH1
contig_1	Pyrodigal	gene	2510671	2510796	.	-	.	ID=GCA000153685_02364_gene;locus_tag=GCA000153685_02364
contig_1	Pyrodigal	CDS	2510671	2510796	.	-	0	ID=GCA000153685_02364;Name=hypothetical protein;locus_tag=GCA000153685_02364;product=hypothetical protein;Parent=GCA000153685_02364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009936466.1,SO:0001217,UniParc:UPI000169A449,UniRef:UniRef100_A0A0H3LB62,UniRef:UniRef50_A0A0Q2QJ77,UniRef:UniRef90_A0A0H3LB62
contig_1	tRNAscan-SE	gene	2510918	2510989	.	-	.	ID=GCA000153685_02365_gene;locus_tag=GCA000153685_02365;gene=trnV
contig_1	tRNAscan-SE	tRNA	2510918	2510989	.	-	.	ID=GCA000153685_02365;Name=tRNA-Val(tac);locus_tag=GCA000153685_02365;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000153685_02365_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Pyrodigal	gene	2511035	2511496	.	-	.	ID=GCA000153685_02366_gene;locus_tag=GCA000153685_02366;gene=ahpE
contig_1	Pyrodigal	CDS	2511035	2511496	.	-	0	ID=GCA000153685_02366;Name=peroxiredoxin AhpE;locus_tag=GCA000153685_02366;product=peroxiredoxin AhpE;Dbxref=GO:0004601,GO:0005737,GO:0005829,GO:0008379,GO:0034599,GO:0045454,GO:0051409,GO:0051920;gene=ahpE;Parent=GCA000153685_02366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411527,KEGG:K24120,RefSeq:WP_003411527.1,SO:0001217,UniParc:UPI000013B8EF,UniRef:UniRef100_P9WIE3,UniRef:UniRef50_P9WIE3,UniRef:UniRef90_P9WIE3;ec_number=1.11.1.29
contig_1	Pyrodigal	gene	2511496	2511918	.	-	.	ID=GCA000153685_02367_gene;locus_tag=GCA000153685_02367
contig_1	Pyrodigal	CDS	2511496	2511918	.	-	0	ID=GCA000153685_02367;Name=DUF3052 domain-containing protein;locus_tag=GCA000153685_02367;product=DUF3052 domain-containing protein;Parent=GCA000153685_02367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911787.1,SO:0001217,UniParc:UPI0001D31676,UniRef:UniRef100_A0A0H3LC07,UniRef:UniRef50_P9WLG9,UniRef:UniRef90_Q7AQ35
contig_1	Pyrodigal	gene	2512010	2512600	.	-	.	ID=GCA000153685_02368_gene;locus_tag=GCA000153685_02368
contig_1	Pyrodigal	CDS	2512010	2512600	.	-	0	ID=GCA000153685_02368;Name=putative protein Rv2240c;locus_tag=GCA000153685_02368;product=putative protein Rv2240c;Dbxref=GO:0005576,GO:0016020;Parent=GCA000153685_02368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911826.1,SO:0001217,UniParc:UPI00005EE67F,UniRef:UniRef100_P9WLG7,UniRef:UniRef50_P9WLG7,UniRef:UniRef90_P9WLG7
contig_1	Pyrodigal	gene	2512772	2515564	.	+	.	ID=GCA000153685_02369_gene;locus_tag=GCA000153685_02369;gene=aceE
contig_1	Pyrodigal	CDS	2512772	2515564	.	+	0	ID=GCA000153685_02369;Name=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;locus_tag=GCA000153685_02369;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;Dbxref=GO:0000287,GO:0004738,GO:0004739,GO:0005576,GO:0005886,GO:0006086,GO:0009274,GO:0045254;gene=aceE;Parent=GCA000153685_02369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911788.1,SO:0001217,UniParc:UPI000169A44A,UniRef:UniRef100_P9WIS9,UniRef:UniRef50_P9WIS9,UniRef:UniRef90_P9WIS9;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	2515624	2516868	.	+	.	ID=GCA000153685_02370_gene;locus_tag=GCA000153685_02370;gene=pucR
contig_1	Pyrodigal	CDS	2515624	2516868	.	+	0	ID=GCA000153685_02370;Name=putative protein Mb2266;locus_tag=GCA000153685_02370;product=putative protein Mb2266;gene=pucR;Parent=GCA000153685_02370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2508,COG:K,RefSeq:WP_003411543.1,SO:0001217,UniParc:UPI000013B8F8,UniRef:UniRef100_P9WPH5,UniRef:UniRef50_P9WPH5,UniRef:UniRef90_P9WPH5
contig_1	Pyrodigal	gene	2517107	2518015	.	+	.	ID=GCA000153685_02371_gene;locus_tag=GCA000153685_02371;gene=fabD
contig_1	Pyrodigal	CDS	2517107	2518015	.	+	0	ID=GCA000153685_02371;Name=malonyl CoA-acyl carrier protein transacylase;locus_tag=GCA000153685_02371;product=malonyl CoA-acyl carrier protein transacylase;Dbxref=GO:0004314,GO:0005829,GO:0005835,GO:0006633;gene=fabD;Parent=GCA000153685_02371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411559,RefSeq:WP_003411559.1,SO:0001217,UniParc:UPI000012A450,UniRef:UniRef100_P9WNG5,UniRef:UniRef50_P9WNG5,UniRef:UniRef90_P9WNG5;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	2518091	2518438	.	+	.	ID=GCA000153685_02372_gene;locus_tag=GCA000153685_02372;gene=acpM
contig_1	Pyrodigal	CDS	2518091	2518438	.	+	0	ID=GCA000153685_02372;Name=meromycolate extension acyl carrier protein AcpM;locus_tag=GCA000153685_02372;product=meromycolate extension acyl carrier protein AcpM;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0005886,GO:0006637,GO:0009245,GO:0009274,GO:0071768;gene=acpM;Parent=GCA000153685_02372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_003411565.1,SO:0001217,UniParc:UPI000003325D,UniRef:UniRef100_P9WQF3,UniRef:UniRef50_P9WQF3,UniRef:UniRef90_P9WQF3
contig_1	Pyrodigal	gene	2518435	2519685	.	+	.	ID=GCA000153685_02373_gene;locus_tag=GCA000153685_02373;gene=kasA
contig_1	Pyrodigal	CDS	2518435	2519685	.	+	0	ID=GCA000153685_02373;Name=KasA/KasB family beta-ketoacyl-ACP synthase;locus_tag=GCA000153685_02373;product=KasA/KasB family beta-ketoacyl-ACP synthase;Dbxref=GO:0004315,GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0019367,GO:0030497,GO:0042802,GO:0071768;gene=kasA;Parent=GCA000153685_02373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_003411571.1,SO:0001217,UniParc:UPI0000036D1D,UniRef:UniRef100_P9WQD9,UniRef:UniRef50_P9WQD9,UniRef:UniRef90_P9WQD9;ec_number=2.3.1.293
contig_1	Pyrodigal	gene	2519716	2521032	.	+	.	ID=GCA000153685_02374_gene;locus_tag=GCA000153685_02374;gene=kasB
contig_1	Pyrodigal	CDS	2519716	2521032	.	+	0	ID=GCA000153685_02374;Name=KasA/KasB family beta-ketoacyl-ACP synthase;locus_tag=GCA000153685_02374;product=KasA/KasB family beta-ketoacyl-ACP synthase;Dbxref=GO:0001666,GO:0004315,GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0030497,GO:0071768;gene=kasB;Parent=GCA000153685_02374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_003899231.1,SO:0001217,UniParc:UPI0000036D1E,UniRef:UniRef100_P9WQD7,UniRef:UniRef50_P9WQD9,UniRef:UniRef90_P9WQD7;ec_number=2.3.1.294
contig_1	Pyrodigal	gene	2521063	2522484	.	+	.	ID=GCA000153685_02375_gene;locus_tag=GCA000153685_02375;gene=accD6
contig_1	Pyrodigal	CDS	2521063	2522484	.	+	0	ID=GCA000153685_02375;Name=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase beta6 subunit;locus_tag=GCA000153685_02375;product=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase beta6 subunit;Dbxref=GO:0003989,GO:0004658,GO:0009274,GO:0009317,GO:0016740,GO:0019367;gene=accD6;Parent=GCA000153685_02375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4799,COG:I,KEGG:K18472,RefSeq:WP_003900487.1,SO:0001217,UniParc:UPI00001313CD,UniRef:UniRef100_P9WQH5,UniRef:UniRef50_P9WQH5,UniRef:UniRef90_P9WQH5;ec_number=6.4.1.3
contig_1	Pyrodigal	gene	2522608	2523495	.	+	.	ID=GCA000153685_02376_gene;locus_tag=GCA000153685_02376
contig_1	Pyrodigal	CDS	2522608	2523495	.	+	0	ID=GCA000153685_02376;Name=putative protein Rv2248;locus_tag=GCA000153685_02376;product=putative protein Rv2248;Dbxref=GO:0005886;Parent=GCA000153685_02376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900488.1,SO:0001217,UniParc:UPI0000EF47C6,UniRef:UniRef100_A0A066S4P1,UniRef:UniRef50_P9WLG5,UniRef:UniRef90_P9WLG5
contig_1	Pyrodigal	gene	2523564	2525108	.	-	.	ID=GCA000153685_02377_gene;locus_tag=GCA000153685_02377;gene=glpD1
contig_1	Pyrodigal	CDS	2523564	2525108	.	-	0	ID=GCA000153685_02377;Name=Glycerol-3-phosphate dehydrogenase 1;locus_tag=GCA000153685_02377;product=Glycerol-3-phosphate dehydrogenase 1;Dbxref=GO:0004368,GO:0005737,GO:0005886,GO:0006071,GO:0009274,GO:0046168;gene=glpD1;Parent=GCA000153685_02377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001650DA,UniRef:UniRef100_P9WN81,UniRef:UniRef50_P9WN81,UniRef:UniRef90_P9WN81;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	2525108	2525677	.	-	.	ID=GCA000153685_02378_gene;locus_tag=GCA000153685_02378
contig_1	Pyrodigal	CDS	2525108	2525677	.	-	0	ID=GCA000153685_02378;Name=putative HTH-type transcriptional regulator Rv2250c;locus_tag=GCA000153685_02378;product=putative HTH-type transcriptional regulator Rv2250c;Dbxref=GO:0000976,GO:0003700,GO:0006355;Parent=GCA000153685_02378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411595.1,SO:0001217,UniParc:UPI000013B901,UniRef:UniRef100_P9WMC5,UniRef:UniRef50_P9WMC5,UniRef:UniRef90_P9WMC5
contig_1	Pyrodigal	gene	2525725	2527314	.	+	.	ID=GCA000153685_02379_gene;locus_tag=GCA000153685_02379
contig_1	Pyrodigal	CDS	2525725	2527314	.	+	0	ID=GCA000153685_02379;Name=PUTATIVE FLAVOPROTEIN;locus_tag=GCA000153685_02379;product=PUTATIVE FLAVOPROTEIN;Parent=GCA000153685_02379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411596.1,SO:0001217,UniParc:UPI00000D2CA6,UniRef:UniRef100_A0A1R3Y0U3,UniRef:UniRef50_A0A0F0KFI2,UniRef:UniRef90_A0A655HV25
contig_1	Pyrodigal	gene	2527311	2528240	.	+	.	ID=GCA000153685_02380_gene;locus_tag=GCA000153685_02380;gene=dagK
contig_1	Pyrodigal	CDS	2527311	2528240	.	+	0	ID=GCA000153685_02380;Name=diacylglycerol kinase;locus_tag=GCA000153685_02380;product=diacylglycerol kinase;Dbxref=GO:0004143,GO:0005524,GO:0005576,GO:0005886,GO:0006665,GO:0008654,GO:0009247,GO:0016301,GO:0046872;gene=dagK;Parent=GCA000153685_02380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411603.1,SO:0001217,UniParc:UPI00000C153F,UniRef:UniRef100_P9WP29,UniRef:UniRef50_P9WP29,UniRef:UniRef90_P9WP29;ec_number=2.7.1.107
contig_1	Pyrodigal	gene	2528306	2528809	.	+	.	ID=GCA000153685_02381_gene;locus_tag=GCA000153685_02381
contig_1	Pyrodigal	CDS	2528306	2528809	.	+	0	ID=GCA000153685_02381;Name=Secreted protein;locus_tag=GCA000153685_02381;product=Secreted protein;Parent=GCA000153685_02381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411608.1,SO:0001217,UniParc:UPI00000D11CF,UniRef:UniRef100_O53527,UniRef:UniRef50_O53527,UniRef:UniRef90_O53527
contig_1	Pyrodigal	gene	2528842	2529252	.	-	.	ID=GCA000153685_02382_gene;locus_tag=GCA000153685_02382
contig_1	Pyrodigal	CDS	2528842	2529252	.	-	0	ID=GCA000153685_02382;Name=Integral membrane protein;locus_tag=GCA000153685_02382;product=Integral membrane protein;Parent=GCA000153685_02382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE685,UniRef:UniRef100_A0A0E8TSG2,UniRef:UniRef50_A0A3N4GN72,UniRef:UniRef90_R4LWR0
contig_1	Pyrodigal	gene	2529416	2529634	.	+	.	ID=GCA000153685_02383_gene;locus_tag=GCA000153685_02383
contig_1	Pyrodigal	CDS	2529416	2529634	.	+	0	ID=GCA000153685_02383;Name=Transcription regulator AsnC/Lrp ligand binding domain-containing protein;locus_tag=GCA000153685_02383;product=Transcription regulator AsnC/Lrp ligand binding domain-containing protein;Parent=GCA000153685_02383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411612.1,SO:0001217,UniParc:UPI00000D2CA7,UniRef:UniRef100_A5U4T8,UniRef:UniRef50_A5U4T8,UniRef:UniRef90_A5U4T8
contig_1	Pyrodigal	gene	2529663	2530175	.	-	.	ID=GCA000153685_02384_gene;locus_tag=GCA000153685_02384
contig_1	Pyrodigal	CDS	2529663	2530175	.	-	0	ID=GCA000153685_02384;Name=DUF3145 domain-containing protein;locus_tag=GCA000153685_02384;product=DUF3145 domain-containing protein;Parent=GCA000153685_02384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411615.1,SO:0001217,UniParc:UPI0001DD0280,UniRef:UniRef100_O53530,UniRef:UniRef50_O53530,UniRef:UniRef90_O53530
contig_1	Pyrodigal	gene	2530326	2531144	.	-	.	ID=GCA000153685_02385_gene;locus_tag=GCA000153685_02385
contig_1	Pyrodigal	CDS	2530326	2531144	.	-	0	ID=GCA000153685_02385;Name=Beta-lactamase-related domain-containing protein;locus_tag=GCA000153685_02385;product=Beta-lactamase-related domain-containing protein;Parent=GCA000153685_02385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411619.1,SO:0001217,UniParc:UPI00000D1088,UniRef:UniRef100_O53531,UniRef:UniRef50_A0A2I2KQH3,UniRef:UniRef90_R4M7P2
contig_1	Pyrodigal	gene	2531158	2532219	.	-	.	ID=GCA000153685_02386_gene;locus_tag=GCA000153685_02386
contig_1	Pyrodigal	CDS	2531158	2532219	.	-	0	ID=GCA000153685_02386;Name=S-adenosylmethionine-dependent methyltransferase Rv2258c;locus_tag=GCA000153685_02386;product=S-adenosylmethionine-dependent methyltransferase Rv2258c;Dbxref=GO:0005886,GO:0008168,GO:0009274,GO:0032259,GO:0071456;Parent=GCA000153685_02386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411622.1,SO:0001217,UniParc:UPI00000D5E7F,UniRef:UniRef100_O53532,UniRef:UniRef50_O53532,UniRef:UniRef90_O53532;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	2532514	2533599	.	+	.	ID=GCA000153685_02387_gene;locus_tag=GCA000153685_02387
contig_1	Pyrodigal	CDS	2532514	2533599	.	+	0	ID=GCA000153685_02387;Name=S-(hydroxymethyl)mycothiol dehydrogenase;locus_tag=GCA000153685_02387;product=S-(hydroxymethyl)mycothiol dehydrogenase;Dbxref=GO:0010127,GO:0050607;Parent=GCA000153685_02387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899236.1,SO:0001217,UniParc:UPI00000D5F1D,UniRef:UniRef100_O53533,UniRef:UniRef50_P80094,UniRef:UniRef90_O53533;ec_number=1.1.1.306
contig_1	Pyrodigal	gene	2533599	2534234	.	+	.	ID=GCA000153685_02388_gene;locus_tag=GCA000153685_02388
contig_1	Pyrodigal	CDS	2533599	2534234	.	+	0	ID=GCA000153685_02388;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000153685_02388;product=Metallo-beta-lactamase domain-containing protein;Parent=GCA000153685_02388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411632.1,SO:0001217,UniParc:UPI00001652DF,UniRef:UniRef100_O53534,UniRef:UniRef50_A0A3G8JQU4,UniRef:UniRef90_O53534
contig_1	Pyrodigal	gene	2534311	2535831	.	-	.	ID=GCA000153685_02389_gene;locus_tag=GCA000153685_02389;gene=lnt
contig_1	Pyrodigal	CDS	2534311	2535831	.	-	0	ID=GCA000153685_02389;Name=apolipoprotein N-acyltransferase;locus_tag=GCA000153685_02389;product=apolipoprotein N-acyltransferase;Dbxref=GO:0016020,GO:0016410,GO:0042158;gene=lnt;Parent=GCA000153685_02389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03820,SO:0001217,UniParc:UPI0001C54E71,UniRef:UniRef100_A0A1R3Y0V4,UniRef:UniRef50_A0A7I7RFJ4,UniRef:UniRef90_A0A8I0JXW2;ec_number=2.3.1.269
contig_1	Pyrodigal	gene	2535908	2536861	.	+	.	ID=GCA000153685_02390_gene;locus_tag=GCA000153685_02390
contig_1	Pyrodigal	CDS	2535908	2536861	.	+	0	ID=GCA000153685_02390;Name=Short chain dehydrogenase;locus_tag=GCA000153685_02390;product=Short chain dehydrogenase;Parent=GCA000153685_02390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899238.1,SO:0001217,UniParc:UPI00000D5F7C,UniRef:UniRef100_O53537,UniRef:UniRef50_A0A3E2MZ11,UniRef:UniRef90_A0A654ZSC2
contig_1	Pyrodigal	gene	2536839	2538617	.	-	.	ID=GCA000153685_02391_gene;locus_tag=GCA000153685_02391
contig_1	Pyrodigal	CDS	2536839	2538617	.	-	0	ID=GCA000153685_02391;Name=Molecular chaperone;locus_tag=GCA000153685_02391;product=Molecular chaperone;Parent=GCA000153685_02391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899240.1,SO:0001217,UniParc:UPI00000D11AF,UniRef:UniRef100_A0A1R3Y0M5,UniRef:UniRef50_A0A1A3CDS6,UniRef:UniRef90_A0A0H3LB77
contig_1	Pyrodigal	gene	2538967	2540196	.	+	.	ID=GCA000153685_02392_gene;locus_tag=GCA000153685_02392
contig_1	Pyrodigal	CDS	2538967	2540196	.	+	0	ID=GCA000153685_02392;Name=putative protein Rv2265;locus_tag=GCA000153685_02392;product=putative protein Rv2265;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_02392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899241.1,SO:0001217,UniParc:UPI000013B913,UniRef:UniRef100_P9WLG3,UniRef:UniRef50_P9WLG3,UniRef:UniRef90_P9WLG3
contig_1	Pyrodigal	gene	2540371	2541657	.	+	.	ID=GCA000153685_02393_gene;locus_tag=GCA000153685_02393;gene=cyp124
contig_1	Pyrodigal	CDS	2540371	2541657	.	+	0	ID=GCA000153685_02393;Name=methyl-branched lipid omega-hydroxylase Cyp124;locus_tag=GCA000153685_02393;product=methyl-branched lipid omega-hydroxylase Cyp124;Dbxref=GO:0005506,GO:0006707,GO:0008395,GO:0010430,GO:0020037,GO:0031073,GO:0036199,GO:0070402,GO:0097089;gene=cyp124;Parent=GCA000153685_02393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003411654,KEGG:K20497,RefSeq:WP_003411654.1,SO:0001217,UniParc:UPI0000126BAC,UniRef:UniRef100_P9WPP3,UniRef:UniRef50_P9WPP3,UniRef:UniRef90_P9WPP3;ec_number=1.14.15.14
contig_1	Pyrodigal	gene	2541911	2543077	.	-	.	ID=GCA000153685_02394_gene;locus_tag=GCA000153685_02394;gene=stf3
contig_1	Pyrodigal	CDS	2541911	2543077	.	-	0	ID=GCA000153685_02394;Name=Omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase Stf3;locus_tag=GCA000153685_02394;product=Omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase Stf3;Dbxref=GO:0008146,GO:0046506;gene=stf3;Parent=GCA000153685_02394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411661.1,SO:0001217,UniParc:UPI000013B916,UniRef:UniRef100_P9WLG1,UniRef:UniRef50_P9WLG1,UniRef:UniRef90_P9WLG1;ec_number=2.8.2.40
contig_1	Pyrodigal	gene	2543166	2544542	.	-	.	ID=GCA000153685_02395_gene;locus_tag=GCA000153685_02395;gene=cyp128
contig_1	Pyrodigal	CDS	2543166	2544542	.	-	0	ID=GCA000153685_02395;Name=Beta-dihydromenaquinone-9 omega-hydroxylase;locus_tag=GCA000153685_02395;product=Beta-dihydromenaquinone-9 omega-hydroxylase;Dbxref=GO:0005506,GO:0005737,GO:0006707,GO:0008395,GO:0020037,GO:0036199;gene=cyp128;Parent=GCA000153685_02395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21199,SO:0001217,UniRef:UniRef50_P9WPN7,UniRef:UniRef90_P9WPN7;ec_number=1.14.15.27
contig_1	Pyrodigal	gene	2544964	2545515	.	+	.	ID=GCA000153685_02396_gene;locus_tag=GCA000153685_02396;gene=lppN
contig_1	Pyrodigal	CDS	2544964	2545515	.	+	0	ID=GCA000153685_02396;Name=Putative lipoprotein LppN;locus_tag=GCA000153685_02396;product=Putative lipoprotein LppN;Dbxref=GO:0005886,GO:0009986;gene=lppN;Parent=GCA000153685_02396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345117.1,SO:0001217,UniParc:UPI000169A489,UniRef:UniRef100_A0A0H3LFB4,UniRef:UniRef50_P9WK73,UniRef:UniRef90_P9WK73
contig_1	Pyrodigal	gene	2545536	2546726	.	+	.	ID=GCA000153685_02397_gene;locus_tag=GCA000153685_02397
contig_1	Pyrodigal	CDS	2545536	2546726	.	+	0	ID=GCA000153685_02397;Name=Putative FAD-linked oxidoreductase;locus_tag=GCA000153685_02397;product=Putative FAD-linked oxidoreductase;Parent=GCA000153685_02397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012781B2,UniRef:UniRef100_A0A0H3LC35,UniRef:UniRef50_P9WIT1,UniRef:UniRef90_A0A7Z7ILW3
contig_1	Pyrodigal	gene	2546961	2548619	.	+	.	ID=GCA000153685_02398_gene;locus_tag=GCA000153685_02398
contig_1	Pyrodigal	CDS	2546961	2548619	.	+	0	ID=GCA000153685_02398;Name=Putative phosphate permease Rv2281;locus_tag=GCA000153685_02398;product=Putative phosphate permease Rv2281;Dbxref=GO:0005315,GO:0005886,GO:0035435;Parent=GCA000153685_02398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03306,RefSeq:WP_003411694.1,SO:0001217,UniParc:UPI000013B92B,UniRef:UniRef100_P9WIA5,UniRef:UniRef50_P9WIA5,UniRef:UniRef90_P9WIA5
contig_1	Pyrodigal	gene	2548726	2549529	.	-	.	ID=GCA000153685_02399_gene;locus_tag=GCA000153685_02399
contig_1	Pyrodigal	CDS	2548726	2549529	.	-	0	ID=GCA000153685_02399;Name=putative HTH-type transcriptional regulator Rv2282c;locus_tag=GCA000153685_02399;product=putative HTH-type transcriptional regulator Rv2282c;Dbxref=GO:0000976,GO:0003700,GO:0005829,GO:0006355;Parent=GCA000153685_02399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00022F31B5,UniRef:UniRef100_A0A0H3LB96,UniRef:UniRef50_P9WMF3,UniRef:UniRef90_P9WMF3
contig_1	Pyrodigal	gene	2549729	2549923	.	+	.	ID=GCA000153685_02400_gene;locus_tag=GCA000153685_02400
contig_1	Pyrodigal	CDS	2549729	2549923	.	+	0	ID=GCA000153685_02400;Name=putative protein Rv2283;locus_tag=GCA000153685_02400;product=putative protein Rv2283;Parent=GCA000153685_02400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902159.1,SO:0001217,UniParc:UPI000013B92E,UniRef:UniRef100_P9WLE9,UniRef:UniRef50_P9WLE9,UniRef:UniRef90_P9WLE9
contig_1	Pyrodigal	gene	2549933	2551228	.	+	.	ID=GCA000153685_02401_gene;locus_tag=GCA000153685_02401;gene=lipM
contig_1	Pyrodigal	CDS	2549933	2551228	.	+	0	ID=GCA000153685_02401;Name=putative carboxylic ester hydrolase LipM;locus_tag=GCA000153685_02401;product=putative carboxylic ester hydrolase LipM;Dbxref=GO:0005576,GO:0005886,GO:0016787,GO:0052167;gene=lipM;Parent=GCA000153685_02401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899248.1,SO:0001217,UniParc:UPI00000D1201,UniRef:UniRef100_Q50681,UniRef:UniRef50_Q50681,UniRef:UniRef90_Q50681;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2551261	2552598	.	+	.	ID=GCA000153685_02402_gene;locus_tag=GCA000153685_02402
contig_1	Pyrodigal	CDS	2551261	2552598	.	+	0	ID=GCA000153685_02402;Name=Putative diacyglycerol O-acyltransferase Rv2285;locus_tag=GCA000153685_02402;product=Putative diacyglycerol O-acyltransferase Rv2285;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0045017,GO:0051701,GO:0071731;Parent=GCA000153685_02402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411704.1,SO:0001217,UniParc:UPI000013B92F,UniRef:UniRef100_P9WKB5,UniRef:UniRef50_P9WKB5,UniRef:UniRef90_P9WKB5;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	2552665	2553357	.	-	.	ID=GCA000153685_02403_gene;locus_tag=GCA000153685_02403
contig_1	Pyrodigal	CDS	2552665	2553357	.	-	0	ID=GCA000153685_02403;Name=putative protein Rv2286c;locus_tag=GCA000153685_02403;product=putative protein Rv2286c;Parent=GCA000153685_02403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411707.1,SO:0001217,UniParc:UPI000013B930,UniRef:UniRef100_P9WLE7,UniRef:UniRef50_P9WLE7,UniRef:UniRef90_P9WLE7
contig_1	Pyrodigal	gene	2553527	2555119	.	+	.	ID=GCA000153685_02404_gene;locus_tag=GCA000153685_02404
contig_1	Pyrodigal	CDS	2553527	2555119	.	+	0	ID=GCA000153685_02404;Name=Na+/H+ antiporter;locus_tag=GCA000153685_02404;product=Na+/H+ antiporter;Dbxref=GO:0005886,GO:0006814,GO:0006885,GO:0015385,GO:0015386,GO:0016020,GO:0051453,GO:0071805,GO:0098719,GO:1902600;Parent=GCA000153685_02404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003916985.1,SO:0001217,UniParc:UPI0001D31692,UniRef:UniRef100_A0A0E8B5X9,UniRef:UniRef50_P9WJI3,UniRef:UniRef90_P9WJI3
contig_1	Pyrodigal	gene	2555397	2556245	.	+	.	ID=GCA000153685_02405_gene;locus_tag=GCA000153685_02405;gene=cdh
contig_1	Pyrodigal	CDS	2555397	2556245	.	+	0	ID=GCA000153685_02405;Name=CDP-diacylglycerol diphosphatase;locus_tag=GCA000153685_02405;product=CDP-diacylglycerol diphosphatase;Dbxref=GO:0005886,GO:0008654,GO:0008715,GO:0046342;gene=cdh;Parent=GCA000153685_02405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01521,RefSeq:WP_003899251.1,SO:0001217,UniParc:UPI0000F0CFD9,UniRef:UniRef100_A0A0E7SXM9,UniRef:UniRef50_A5U4X2,UniRef:UniRef90_A5U4X2;ec_number=3.6.1.26
contig_1	Pyrodigal	gene	2556669	2556902	.	+	.	ID=GCA000153685_02406_gene;locus_tag=GCA000153685_02406
contig_1	Pyrodigal	CDS	2556669	2556902	.	+	0	ID=GCA000153685_02406;Name=Lipoprotein;locus_tag=GCA000153685_02406;product=Lipoprotein;Parent=GCA000153685_02406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F62C4,UniRef:UniRef100_A0A0H3LC45,UniRef:UniRef50_J9WA29,UniRef:UniRef90_A0A0H3LC45
contig_1	Pyrodigal	gene	2556962	2557816	.	+	.	ID=GCA000153685_02407_gene;locus_tag=GCA000153685_02407;gene=sseB
contig_1	Pyrodigal	CDS	2556962	2557816	.	+	0	ID=GCA000153685_02407;Name=Putative thiosulfate sulfurtransferase SseB;locus_tag=GCA000153685_02407;product=Putative thiosulfate sulfurtransferase SseB;Dbxref=GO:0004792;gene=sseB;Parent=GCA000153685_02407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899253.1,SO:0001217,UniParc:UPI0000136F0B,UniRef:UniRef100_P9WHF5,UniRef:UniRef50_P9WHF5,UniRef:UniRef90_P9WHF5;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	2557817	2558041	.	-	.	ID=GCA000153685_02408_gene;locus_tag=GCA000153685_02408
contig_1	Pyrodigal	CDS	2557817	2558041	.	-	0	ID=GCA000153685_02408;Name=putative protein Rv2292c;locus_tag=GCA000153685_02408;product=putative protein Rv2292c;Dbxref=GO:0003824,GO:0009116;Parent=GCA000153685_02408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411731.1,SO:0001217,UniParc:UPI000013B94C,UniRef:UniRef100_P9WLE3,UniRef:UniRef50_P9WLE3,UniRef:UniRef90_P9WLE3
contig_1	Pyrodigal	gene	2558080	2558820	.	-	.	ID=GCA000153685_02409_gene;locus_tag=GCA000153685_02409
contig_1	Pyrodigal	CDS	2558080	2558820	.	-	0	ID=GCA000153685_02409;Name=putative protein Rv2293c;locus_tag=GCA000153685_02409;product=putative protein Rv2293c;Dbxref=GO:0003824,GO:0005886,GO:0009116;Parent=GCA000153685_02409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899254.1,SO:0001217,UniParc:UPI000013B94E,UniRef:UniRef100_P9WLE1,UniRef:UniRef50_P9WLE1,UniRef:UniRef90_P9WLE1
contig_1	Pyrodigal	gene	2559175	2560338	.	+	.	ID=GCA000153685_02410_gene;locus_tag=GCA000153685_02410
contig_1	Pyrodigal	CDS	2559175	2560338	.	+	0	ID=GCA000153685_02410;Name=Putative cystathionine beta-lyase;locus_tag=GCA000153685_02410;product=Putative cystathionine beta-lyase;Dbxref=GO:0005886,GO:0009086,GO:0030170,GO:0047804;Parent=GCA000153685_02410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001650E0,UniRef:UniRef100_P9WQ83,UniRef:UniRef50_P9WQ83,UniRef:UniRef90_P9WQ83;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	2560560	2561198	.	+	.	ID=GCA000153685_02411_gene;locus_tag=GCA000153685_02411
contig_1	Pyrodigal	CDS	2560560	2561198	.	+	0	ID=GCA000153685_02411;Name=UPF0167 protein Rv2295;locus_tag=GCA000153685_02411;product=UPF0167 protein Rv2295;Dbxref=GO:0052170;Parent=GCA000153685_02411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09925,RefSeq:WP_003899256.1,SO:0001217,UniParc:UPI00001652E0,UniRef:UniRef100_P9WFL7,UniRef:UniRef50_P9WFL7,UniRef:UniRef90_P9WFL7
contig_1	Pyrodigal	gene	2561292	2562194	.	+	.	ID=GCA000153685_02412_gene;locus_tag=GCA000153685_02412;gene=dhmA1
contig_1	Pyrodigal	CDS	2561292	2562194	.	+	0	ID=GCA000153685_02412;Name=Haloalkane dehalogenase 1;locus_tag=GCA000153685_02412;product=Haloalkane dehalogenase 1;Dbxref=GO:0005886,GO:0009274,GO:0016787,GO:0018786;gene=dhmA1;Parent=GCA000153685_02412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345122.1,SO:0001217,UniParc:UPI000169A4D7,UniRef:UniRef100_A0A0H3LI19,UniRef:UniRef50_P9WMS3,UniRef:UniRef90_P9WMS3;ec_number=3.8.1.5
contig_1	Pyrodigal	gene	2562226	2562678	.	+	.	ID=GCA000153685_02413_gene;locus_tag=GCA000153685_02413
contig_1	Pyrodigal	CDS	2562226	2562678	.	+	0	ID=GCA000153685_02413;Name=putative protein Rv2297;locus_tag=GCA000153685_02413;product=putative protein Rv2297;Dbxref=GO:0005829;Parent=GCA000153685_02413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411851.1,SO:0001217,UniParc:UPI000013B955,UniRef:UniRef100_P9WLD9,UniRef:UniRef50_P9WLD9,UniRef:UniRef90_P9WLD9
contig_1	Pyrodigal	gene	2562774	2563841	.	+	.	ID=GCA000153685_02414_gene;locus_tag=GCA000153685_02414
contig_1	Pyrodigal	CDS	2562774	2563841	.	+	0	ID=GCA000153685_02414;Name=putative oxidoreductase Mb2320;locus_tag=GCA000153685_02414;product=putative oxidoreductase Mb2320;Dbxref=GO:0016491;Parent=GCA000153685_02414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE693,UniRef:UniRef100_P9WQA7,UniRef:UniRef50_P9WQA7,UniRef:UniRef90_P9WQA7;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2563847	2565790	.	-	.	ID=GCA000153685_02415_gene;locus_tag=GCA000153685_02415;gene=htpG
contig_1	Pyrodigal	CDS	2563847	2565790	.	-	0	ID=GCA000153685_02415;Name=molecular chaperone HtpG;locus_tag=GCA000153685_02415;product=molecular chaperone HtpG;Dbxref=GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006457,GO:0006974,GO:0009274,GO:0009408,GO:0016887,GO:0051082,GO:0071451,GO:0140662;gene=htpG;Parent=GCA000153685_02415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411855.1,SO:0001217,UniParc:UPI000012CDDF,UniRef:UniRef100_P9WMJ7,UniRef:UniRef50_P9WMJ7,UniRef:UniRef90_P9WMJ7
contig_1	Pyrodigal	gene	2565864	2566682	.	-	.	ID=GCA000153685_02416_gene;locus_tag=GCA000153685_02416
contig_1	Pyrodigal	CDS	2565864	2566682	.	-	0	ID=GCA000153685_02416;Name=putative metallo-hydrolase Rv2300c;locus_tag=GCA000153685_02416;product=putative metallo-hydrolase Rv2300c;Dbxref=GO:0005886,GO:0016787,GO:0046872;Parent=GCA000153685_02416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_055384497.1,SO:0001217,UniParc:UPI00005EE694,UniRef:UniRef100_P9WLD7,UniRef:UniRef50_P9WLD7,UniRef:UniRef90_P9WLD7;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2566836	2567495	.	+	.	ID=GCA000153685_02417_gene;locus_tag=GCA000153685_02417;gene=cut2
contig_1	Pyrodigal	CDS	2566836	2567495	.	+	0	ID=GCA000153685_02417;Name=putative carboxylesterase Culp2;locus_tag=GCA000153685_02417;product=putative carboxylesterase Culp2;Dbxref=GO:0005576,GO:0009986,GO:0042783,GO:0052689;gene=cut2;Parent=GCA000153685_02417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902163.1,SO:0001217,UniParc:UPI000015A6A1,UniRef:UniRef100_P9WP41,UniRef:UniRef50_P9WP41,UniRef:UniRef90_P9WP41;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2567601	2567843	.	+	.	ID=GCA000153685_02418_gene;locus_tag=GCA000153685_02418
contig_1	Pyrodigal	CDS	2567601	2567843	.	+	0	ID=GCA000153685_02418;Name=putative protein Rv2302;locus_tag=GCA000153685_02418;product=putative protein Rv2302;Dbxref=GO:0009274;Parent=GCA000153685_02418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411866.1,SO:0001217,UniParc:UPI000013BA55,UniRef:UniRef100_P9WLD5,UniRef:UniRef50_P9WLD5,UniRef:UniRef90_P9WLD5
contig_1	Pyrodigal	gene	2567884	2568807	.	-	.	ID=GCA000153685_02419_gene;locus_tag=GCA000153685_02419
contig_1	Pyrodigal	CDS	2567884	2568807	.	-	0	ID=GCA000153685_02419;Name=Antibiotic-resistance protein;locus_tag=GCA000153685_02419;product=Antibiotic-resistance protein;Parent=GCA000153685_02419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411868.1,SO:0001217,UniParc:UPI00000D1241,UniRef:UniRef100_A5U4Y6,UniRef:UniRef50_A0A498PW00,UniRef:UniRef90_A5U4Y6
contig_1	Pyrodigal	gene	2568804	2569013	.	-	.	ID=GCA000153685_02420_gene;locus_tag=GCA000153685_02420
contig_1	Pyrodigal	CDS	2568804	2569013	.	-	0	ID=GCA000153685_02420;Name=putative protein Mb2326c;locus_tag=GCA000153685_02420;product=putative protein Mb2326c;Parent=GCA000153685_02420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411870.1,SO:0001217,UniParc:UPI000013BA58,UniRef:UniRef100_P9WLD3,UniRef:UniRef50_P9WLD3,UniRef:UniRef90_P9WLD3
contig_1	Pyrodigal	gene	2569597	2570886	.	+	.	ID=GCA000153685_02421_gene;locus_tag=GCA000153685_02421
contig_1	Pyrodigal	CDS	2569597	2570886	.	+	0	ID=GCA000153685_02421;Name=putative protein Rv2305;locus_tag=GCA000153685_02421;product=putative protein Rv2305;Dbxref=GO:0005886;Parent=GCA000153685_02421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899261.1,SO:0001217,UniParc:UPI000013BA5A,UniRef:UniRef100_P9WLD1,UniRef:UniRef50_P9WLD1,UniRef:UniRef90_P9WLD1
contig_1	Pyrodigal	gene	2570982	2571245	.	-	.	ID=GCA000153685_02422_gene;locus_tag=GCA000153685_02422
contig_1	Pyrodigal	CDS	2570982	2571245	.	-	0	ID=GCA000153685_02422;Name=putative protein Rv2306c;locus_tag=GCA000153685_02422;product=putative protein Rv2306c;Dbxref=GO:0005886;Parent=GCA000153685_02422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE695,UniRef:UniRef100_P9WLC9,UniRef:UniRef50_P9WLC9,UniRef:UniRef90_P9WLC9
contig_1	Pyrodigal	gene	2571285	2571710	.	+	.	ID=GCA000153685_02423_gene;locus_tag=GCA000153685_02423
contig_1	Pyrodigal	CDS	2571285	2571710	.	+	0	ID=GCA000153685_02423;Name=TVP38/TMEM64 family membrane protein;locus_tag=GCA000153685_02423;product=TVP38/TMEM64 family membrane protein;Parent=GCA000153685_02423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A51D,UniRef:UniRef100_A0A0E9A8D3,UniRef:UniRef50_Q79FG4,UniRef:UniRef90_Q79FG4
contig_1	Pyrodigal	gene	2571639	2572508	.	-	.	ID=GCA000153685_02424_gene;locus_tag=GCA000153685_02424
contig_1	Pyrodigal	CDS	2571639	2572508	.	-	0	ID=GCA000153685_02424;Name=putative protein Rv2307c;locus_tag=GCA000153685_02424;product=putative protein Rv2307c;Dbxref=GO:0005886,GO:0009274,GO:0052167;Parent=GCA000153685_02424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P9WLC7,UniRef:UniRef90_P9WLC7
contig_1	Pyrodigal	gene	2573641	2573799	.	-	.	ID=GCA000153685_02425_gene;locus_tag=GCA000153685_02425
contig_1	Pyrodigal	CDS	2573641	2573799	.	-	0	ID=GCA000153685_02425;Name=Glycine-rich protein;locus_tag=GCA000153685_02425;product=Glycine-rich protein;Parent=GCA000153685_02425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A9AD33,UniRef:UniRef100_A0A0E7XKY8,UniRef:UniRef50_A0A0E7XKY8,UniRef:UniRef90_A0A0E7XKY8
contig_1	Pyrodigal	gene	2574206	2574922	.	+	.	ID=GCA000153685_02426_gene;locus_tag=GCA000153685_02426
contig_1	Pyrodigal	CDS	2574206	2574922	.	+	0	ID=GCA000153685_02426;Name=putative protein Rv2308;locus_tag=GCA000153685_02426;product=putative protein Rv2308;Parent=GCA000153685_02426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411885.1,SO:0001217,UniParc:UPI000013BA5E,UniRef:UniRef100_P9WLC5,UniRef:UniRef50_P9WLC5,UniRef:UniRef90_P9WLC5
contig_1	Pyrodigal	gene	2574932	2575264	.	+	.	ID=GCA000153685_02427_gene;locus_tag=GCA000153685_02427
contig_1	Pyrodigal	CDS	2574932	2575264	.	+	0	ID=GCA000153685_02427;Name=VapC45 PIN like domain-containing protein;locus_tag=GCA000153685_02427;product=VapC45 PIN like domain-containing protein;Parent=GCA000153685_02427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411888.1,SO:0001217,UniParc:UPI00000D2CB3,UniRef:UniRef100_Q8VJM5,UniRef:UniRef50_Q8VJM5,UniRef:UniRef90_Q8VJM5
contig_1	Pyrodigal	gene	2575332	2575424	.	+	.	ID=GCA000153685_02428_gene;locus_tag=GCA000153685_02428
contig_1	Pyrodigal	CDS	2575332	2575424	.	+	0	ID=GCA000153685_02428;Name=hypothetical protein;locus_tag=GCA000153685_02428;product=hypothetical protein;Parent=GCA000153685_02428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001900EC0,UniRef:UniRef100_A0A0E8USW6,UniRef:UniRef50_A0A0E8USW6,UniRef:UniRef90_A0A0E8USW6
contig_1	tRNAscan-SE	gene	2575551	2575624	.	-	.	ID=GCA000153685_02429_gene;locus_tag=GCA000153685_02429;gene=trnI
contig_1	tRNAscan-SE	tRNA	2575551	2575624	.	-	.	ID=GCA000153685_02429;Name=tRNA-Ile2(cat);locus_tag=GCA000153685_02429;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000153685_02429_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Pyrodigal	gene	2575630	2576085	.	-	.	ID=GCA000153685_02430_gene;locus_tag=GCA000153685_02430
contig_1	Pyrodigal	CDS	2575630	2576085	.	-	0	ID=GCA000153685_02430;Name=Tyr recombinase domain-containing protein;locus_tag=GCA000153685_02430;product=Tyr recombinase domain-containing protein;Parent=GCA000153685_02430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899267.1,SO:0001217,UniParc:UPI00000D1203,UniRef:UniRef100_P71903,UniRef:UniRef50_A0A5S9R8Q1,UniRef:UniRef90_A0A829CDJ0
contig_1	Pyrodigal	gene	2576264	2576431	.	-	.	ID=GCA000153685_02431_gene;locus_tag=GCA000153685_02431
contig_1	Pyrodigal	CDS	2576264	2576431	.	-	0	ID=GCA000153685_02431;Name=hypothetical protein;locus_tag=GCA000153685_02431;product=hypothetical protein;Parent=GCA000153685_02431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907913.1,SO:0001217,UniParc:UPI00000D2CB6,UniRef:UniRef100_A0A0H3LBC6,UniRef:UniRef50_A0A0H3LBC6,UniRef:UniRef90_A0A0H3LBC6
contig_1	Pyrodigal	gene	2577064	2577216	.	+	.	ID=GCA000153685_02432_gene;locus_tag=GCA000153685_02432
contig_1	Pyrodigal	CDS	2577064	2577216	.	+	0	ID=GCA000153685_02432;Name=hypothetical protein;locus_tag=GCA000153685_02432;product=hypothetical protein;Parent=GCA000153685_02432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2CBA,UniRef:UniRef100_A0A0H3LFF5,UniRef:UniRef50_A0A0H3LFF5,UniRef:UniRef90_A0A0H3LFF5
contig_1	Pyrodigal	gene	2577225	2577566	.	+	.	ID=GCA000153685_02433_gene;locus_tag=GCA000153685_02433
contig_1	Pyrodigal	CDS	2577225	2577566	.	+	0	ID=GCA000153685_02433;Name=putative protein Rv2310;locus_tag=GCA000153685_02433;product=putative protein Rv2310;Dbxref=GO:0003677;Parent=GCA000153685_02433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901374.1,SO:0001217,UniParc:UPI0001C54E67,UniRef:UniRef100_A0A0E7SK42,UniRef:UniRef50_P9WLC3,UniRef:UniRef90_P9WLC3
contig_1	Pyrodigal	gene	2577599	2578195	.	+	.	ID=GCA000153685_02434_gene;locus_tag=GCA000153685_02434
contig_1	Pyrodigal	CDS	2577599	2578195	.	+	0	ID=GCA000153685_02434;Name=putative protein Rv2311;locus_tag=GCA000153685_02434;product=putative protein Rv2311;Parent=GCA000153685_02434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899268.1,SO:0001217,UniParc:UPI00005EE697,UniRef:UniRef100_A0A0H3LI43,UniRef:UniRef50_P9WLC1,UniRef:UniRef90_P9WLC1
contig_1	Pyrodigal	gene	2578273	2578542	.	+	.	ID=GCA000153685_02435_gene;locus_tag=GCA000153685_02435
contig_1	Pyrodigal	CDS	2578273	2578542	.	+	0	ID=GCA000153685_02435;Name=putative protein Rv2312;locus_tag=GCA000153685_02435;product=putative protein Rv2312;Parent=GCA000153685_02435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411919.1,SO:0001217,UniParc:UPI000013BA62,UniRef:UniRef100_P9WLB9,UniRef:UniRef50_P9WLB9,UniRef:UniRef90_P9WLB9
contig_1	Pyrodigal	gene	2578839	2579693	.	-	.	ID=GCA000153685_02436_gene;locus_tag=GCA000153685_02436
contig_1	Pyrodigal	CDS	2578839	2579693	.	-	0	ID=GCA000153685_02436;Name=putative protein Mb2340c;locus_tag=GCA000153685_02436;product=putative protein Mb2340c;Parent=GCA000153685_02436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411924.1,SO:0001217,UniParc:UPI000013BA63,UniRef:UniRef100_P9WLB7,UniRef:UniRef50_P9WLB7,UniRef:UniRef90_P9WLB7
contig_1	Pyrodigal	gene	2579704	2581077	.	-	.	ID=GCA000153685_02437_gene;locus_tag=GCA000153685_02437
contig_1	Pyrodigal	CDS	2579704	2581077	.	-	0	ID=GCA000153685_02437;Name=Conserved protein;locus_tag=GCA000153685_02437;product=Conserved protein;Parent=GCA000153685_02437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899270.1,SO:0001217,UniParc:UPI00000D1225,UniRef:UniRef100_P71898,UniRef:UniRef50_Q0RBG5,UniRef:UniRef90_P71898
contig_1	Pyrodigal	gene	2581074	2582591	.	-	.	ID=GCA000153685_02438_gene;locus_tag=GCA000153685_02438
contig_1	Pyrodigal	CDS	2581074	2582591	.	-	0	ID=GCA000153685_02438;Name=Metalloprotease TldD/E C-terminal domain-containing protein;locus_tag=GCA000153685_02438;product=Metalloprotease TldD/E C-terminal domain-containing protein;Parent=GCA000153685_02438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03568,RefSeq:WP_003411929.1,SO:0001217,UniParc:UPI00000D11F8,UniRef:UniRef100_P71897,UniRef:UniRef50_A0A6F8YQU1,UniRef:UniRef90_R4M7V0
contig_1	Pyrodigal	gene	2582625	2583497	.	+	.	ID=GCA000153685_02439_gene;locus_tag=GCA000153685_02439
contig_1	Pyrodigal	CDS	2582625	2583497	.	+	0	ID=GCA000153685_02439;Name=Sugar ABC transporter%2C permease protein;locus_tag=GCA000153685_02439;product=Sugar ABC transporter%2C permease protein;Parent=GCA000153685_02439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411940.1,SO:0001217,UniParc:UPI00001650E3,UniRef:UniRef100_Q7D7B9,UniRef:UniRef50_Q9CBN8,UniRef:UniRef90_Q7D7B9
contig_1	Pyrodigal	gene	2583484	2584308	.	+	.	ID=GCA000153685_02440_gene;locus_tag=GCA000153685_02440;gene=uspB
contig_1	Pyrodigal	CDS	2583484	2584308	.	+	0	ID=GCA000153685_02440;Name=Sugar ABC transporter permease protein UspB;locus_tag=GCA000153685_02440;product=Sugar ABC transporter permease protein UspB;gene=uspB;Parent=GCA000153685_02440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411946.1,SO:0001217,UniParc:UPI00000D11F0,UniRef:UniRef100_A5U505,UniRef:UniRef50_A0A7K0DEQ9,UniRef:UniRef90_A5U505
contig_1	Pyrodigal	gene	2584305	2585627	.	+	.	ID=GCA000153685_02441_gene;locus_tag=GCA000153685_02441;gene=uspC
contig_1	Pyrodigal	CDS	2584305	2585627	.	+	0	ID=GCA000153685_02441;Name=Sugar ABC transporter substrate-binding protein UspC;locus_tag=GCA000153685_02441;product=Sugar ABC transporter substrate-binding protein UspC;gene=uspC;Parent=GCA000153685_02441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411947.1,SO:0001217,UniParc:UPI00000CA927,UniRef:UniRef100_A5U506,UniRef:UniRef50_A0A0Q5E7F6,UniRef:UniRef90_A5U506
contig_1	Pyrodigal	gene	2585635	2586513	.	-	.	ID=GCA000153685_02442_gene;locus_tag=GCA000153685_02442
contig_1	Pyrodigal	CDS	2585635	2586513	.	-	0	ID=GCA000153685_02442;Name=Universal stress protein Mb2346c;locus_tag=GCA000153685_02442;product=Universal stress protein Mb2346c;Parent=GCA000153685_02442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411952.1,SO:0001217,UniParc:UPI000013BA69,UniRef:UniRef100_P9WLB5,UniRef:UniRef50_P9WLB5,UniRef:UniRef90_P9WLB5
contig_1	Pyrodigal	gene	2586510	2587907	.	-	.	ID=GCA000153685_02443_gene;locus_tag=GCA000153685_02443;gene=rocE
contig_1	Pyrodigal	CDS	2586510	2587907	.	-	0	ID=GCA000153685_02443;Name=Cationic amino acid transport integral membrane protein RocE;locus_tag=GCA000153685_02443;product=Cationic amino acid transport integral membrane protein RocE;gene=rocE;Parent=GCA000153685_02443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE699,UniRef:UniRef100_A5U508,UniRef:UniRef50_K9DH20,UniRef:UniRef90_A5U508
contig_1	Pyrodigal	gene	2587941	2588486	.	-	.	ID=GCA000153685_02444_gene;locus_tag=GCA000153685_02444
contig_1	Pyrodigal	CDS	2587941	2588486	.	-	0	ID=GCA000153685_02444;Name=Ornithine aminotransferase;locus_tag=GCA000153685_02444;product=Ornithine aminotransferase;Parent=GCA000153685_02444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411956.1,SO:0001217,UniParc:UPI00000CA930,UniRef:UniRef100_A0A0H3LBB8,UniRef:UniRef50_A0A0H3LBB8,UniRef:UniRef90_A0A0H3LBB8
contig_1	Pyrodigal	gene	2588486	2589151	.	-	.	ID=GCA000153685_02445_gene;locus_tag=GCA000153685_02445
contig_1	Pyrodigal	CDS	2588486	2589151	.	-	0	ID=GCA000153685_02445;Name=Ornithine aminotransferase 2;locus_tag=GCA000153685_02445;product=Ornithine aminotransferase 2;Parent=GCA000153685_02445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411957.1,SO:0001217,UniParc:UPI00000CA92F,UniRef:UniRef100_A5U510,UniRef:UniRef50_A0A2I7W959,UniRef:UniRef90_A0A2I7W959
contig_1	Pyrodigal	gene	2589148	2589921	.	-	.	ID=GCA000153685_02446_gene;locus_tag=GCA000153685_02446;gene=ddaH
contig_1	Pyrodigal	CDS	2589148	2589921	.	-	0	ID=GCA000153685_02446;Name=dimethylargininase;locus_tag=GCA000153685_02446;product=dimethylargininase;Dbxref=GO:0016403;gene=ddaH;Parent=GCA000153685_02446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27545,RefSeq:WP_003913741.1,SO:0001217,UniParc:UPI00005EE69C,UniRef:UniRef100_P71889,UniRef:UniRef50_P71889,UniRef:UniRef90_P71889;ec_number=3.5.3.18
contig_1	Pyrodigal	gene	2590121	2590567	.	+	.	ID=GCA000153685_02447_gene;locus_tag=GCA000153685_02447
contig_1	Pyrodigal	CDS	2590121	2590567	.	+	0	ID=GCA000153685_02447;Name=HTH-type transcriptional regulator Rv2324;locus_tag=GCA000153685_02447;product=HTH-type transcriptional regulator Rv2324;Dbxref=GO:0005829,GO:0043200,GO:0043565;Parent=GCA000153685_02447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411963.1,SO:0001217,UniParc:UPI00000D1200,UniRef:UniRef100_P71888,UniRef:UniRef50_P71888,UniRef:UniRef90_P71888
contig_1	Pyrodigal	gene	2590796	2591644	.	-	.	ID=GCA000153685_02448_gene;locus_tag=GCA000153685_02448
contig_1	Pyrodigal	CDS	2590796	2591644	.	-	0	ID=GCA000153685_02448;Name=putative protein Rv2325c;locus_tag=GCA000153685_02448;product=putative protein Rv2325c;Dbxref=GO:0005886;Parent=GCA000153685_02448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16785,RefSeq:WP_003411966.1,SO:0001217,UniParc:UPI000013BA72,UniRef:UniRef100_P9WPI7,UniRef:UniRef50_P9WPI7,UniRef:UniRef90_P9WPI7
contig_1	Pyrodigal	gene	2591641	2593734	.	-	.	ID=GCA000153685_02449_gene;locus_tag=GCA000153685_02449;gene=ccmA
contig_1	Pyrodigal	CDS	2591641	2593734	.	-	0	ID=GCA000153685_02449;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA000153685_02449;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0005524,GO:0005886,GO:0009274,GO:0015439,GO:0015886,GO:0016887,GO:0017004,GO:0022857,GO:0042626,GO:0043190;gene=ccmA;Parent=GCA000153685_02449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411969.1,SO:0001217,UniParc:UPI000013BA74,UniRef:UniRef100_P9WQI7,UniRef:UniRef50_P9WQI7,UniRef:UniRef90_P9WQI7;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	2593775	2594266	.	+	.	ID=GCA000153685_02450_gene;locus_tag=GCA000153685_02450
contig_1	Pyrodigal	CDS	2593775	2594266	.	+	0	ID=GCA000153685_02450;Name=Conserved protein;locus_tag=GCA000153685_02450;product=Conserved protein;Parent=GCA000153685_02450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411970.1,SO:0001217,UniParc:UPI00000D1211,UniRef:UniRef100_P71885,UniRef:UniRef50_B2HL66,UniRef:UniRef90_P71885
contig_1	Pyrodigal	gene	2594518	2595666	.	+	.	ID=GCA000153685_02451_gene;locus_tag=GCA000153685_02451;gene=pE23
contig_1	Pyrodigal	CDS	2594518	2595666	.	+	0	ID=GCA000153685_02451;Name=putative PE family protein PE23;locus_tag=GCA000153685_02451;product=putative PE family protein PE23;Dbxref=GO:0005886;gene=pE23;Parent=GCA000153685_02451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411972.1,SO:0001217,UniParc:UPI000013BA76,UniRef:UniRef100_P9WIG9,UniRef:UniRef50_P9WIG9,UniRef:UniRef90_P9WIG9
contig_1	Pyrodigal	gene	2595701	2597248	.	-	.	ID=GCA000153685_02452_gene;locus_tag=GCA000153685_02452;gene=narK1
contig_1	Pyrodigal	CDS	2595701	2597248	.	-	0	ID=GCA000153685_02452;Name=Nitrite extrusion protein 1 NarK1;locus_tag=GCA000153685_02452;product=Nitrite extrusion protein 1 NarK1;gene=narK1;Parent=GCA000153685_02452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02575,RefSeq:WP_003411973.1,SO:0001217,UniParc:UPI00000D120C,UniRef:UniRef100_A5U517,UniRef:UniRef50_A0A051TWI5,UniRef:UniRef90_A5U517
contig_1	Pyrodigal	gene	2597482	2598009	.	-	.	ID=GCA000153685_02453_gene;locus_tag=GCA000153685_02453;gene=lppP
contig_1	Pyrodigal	CDS	2597482	2598009	.	-	0	ID=GCA000153685_02453;Name=Putative lipoprotein LppP;locus_tag=GCA000153685_02453;product=Putative lipoprotein LppP;Dbxref=GO:0005886;gene=lppP;Parent=GCA000153685_02453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411974.1,SO:0001217,UniParc:UPI000012E873,UniRef:UniRef100_P9WK69,UniRef:UniRef50_P9WK69,UniRef:UniRef90_P9WK69
contig_1	Pyrodigal	gene	2598084	2598470	.	+	.	ID=GCA000153685_02454_gene;locus_tag=GCA000153685_02454
contig_1	Pyrodigal	CDS	2598084	2598470	.	+	0	ID=GCA000153685_02454;Name=putative protein Rv2331;locus_tag=GCA000153685_02454;product=putative protein Rv2331;Parent=GCA000153685_02454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411975.1,SO:0001217,UniParc:UPI000013BA78,UniRef:UniRef100_P9WLB3,UniRef:UniRef50_P9WLB3,UniRef:UniRef90_P9WLB3
contig_1	Pyrodigal	gene	2598737	2598865	.	+	.	ID=GCA000153685_02455_gene;locus_tag=GCA000153685_02455;pseudogene=unitary
contig_1	Pyrodigal	CDS	2598737	2598865	.	+	0	ID=GCA000153685_02455;Name=hypothetical protein;locus_tag=GCA000153685_02455;product=hypothetical protein;pseudogene=unitary;Parent=GCA000153685_02455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003916988.1,SO:0001217,UniParc:UPI000169A54A,UniRef:UniRef100_A0A1R3Y0X3,UniRef:UniRef50_Q79FF7,UniRef:UniRef50_UPI0032E4F531,UniRef:UniRef90_Q79FF7,UniRef:UniRef90_UPI0005DC9DC7
contig_1	Pyrodigal	gene	2598895	2600541	.	+	.	ID=GCA000153685_02456_gene;locus_tag=GCA000153685_02456;gene=mez
contig_1	Pyrodigal	CDS	2598895	2600541	.	+	0	ID=GCA000153685_02456;Name=Putative malate oxidoreductase [NAD];locus_tag=GCA000153685_02456;product=Putative malate oxidoreductase [NAD];Dbxref=GO:0004470,GO:0004471,GO:0005829,GO:0006090,GO:0006108,GO:0008948,GO:0046872,GO:0051287;gene=mez;Parent=GCA000153685_02456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899273.1,SO:0001217,UniParc:UPI000012EBB3,UniRef:UniRef100_P9WK25,UniRef:UniRef50_P45868,UniRef:UniRef90_P9WK25;ec_number=1.1.1.38
contig_1	Pyrodigal	gene	2600495	2602108	.	-	.	ID=GCA000153685_02457_gene;locus_tag=GCA000153685_02457;gene=stp
contig_1	Pyrodigal	CDS	2600495	2602108	.	-	0	ID=GCA000153685_02457;Name=multidrug resistance protein Stp;locus_tag=GCA000153685_02457;product=multidrug resistance protein Stp;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0046677;gene=stp;Parent=GCA000153685_02457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003906797,RefSeq:WP_003899274.1,SO:0001217,UniParc:UPI00001650E7,UniRef:UniRef100_P9WG90,UniRef:UniRef50_P9WG91,UniRef:UniRef90_P9WG91
contig_1	Pyrodigal	gene	2602583	2603515	.	+	.	ID=GCA000153685_02458_gene;locus_tag=GCA000153685_02458;gene=cysK
contig_1	Pyrodigal	CDS	2602583	2603515	.	+	0	ID=GCA000153685_02458;Name=O-acetylserine sulfhydrylase;locus_tag=GCA000153685_02458;product=O-acetylserine sulfhydrylase;Dbxref=GO:0004124,GO:0005576,GO:0005737,GO:0005829,GO:0006535,GO:0030170,GO:0080146;gene=cysK;Parent=GCA000153685_02458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899275,RefSeq:WP_003899275.1,SO:0001217,UniParc:UPI0000128D0C,UniRef:UniRef100_P9WP55,UniRef:UniRef50_P9WP55,UniRef:UniRef90_P9WP55;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	2603519	2604208	.	+	.	ID=GCA000153685_02459_gene;locus_tag=GCA000153685_02459;gene=cysE
contig_1	Pyrodigal	CDS	2603519	2604208	.	+	0	ID=GCA000153685_02459;Name=serine O-acetyltransferase;locus_tag=GCA000153685_02459;product=serine O-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000153685_02459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003411985.1,SO:0001217,UniParc:UPI00000D5024,UniRef:UniRef100_P95231,UniRef:UniRef50_P95231,UniRef:UniRef90_P95231;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	2604702	2605028	.	+	.	ID=GCA000153685_02460_gene;locus_tag=GCA000153685_02460;gene=tnp
contig_1	Pyrodigal	CDS	2604702	2605028	.	+	0	ID=GCA000153685_02460;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_02460;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_02460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	2605079	2605963	.	+	.	ID=GCA000153685_02461_gene;locus_tag=GCA000153685_02461;gene=tnp
contig_1	Pyrodigal	CDS	2605079	2605963	.	+	0	ID=GCA000153685_02461;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_02461;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_02461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	2606060	2606950	.	+	.	ID=GCA000153685_02462_gene;locus_tag=GCA000153685_02462
contig_1	Pyrodigal	CDS	2606060	2606950	.	+	0	ID=GCA000153685_02462;Name=hypothetical protein;locus_tag=GCA000153685_02462;product=hypothetical protein;Parent=GCA000153685_02462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900501.1,SO:0001217,UniParc:UPI00012781F6,UniRef:UniRef100_A0A0H3LBG3,UniRef:UniRef50_P95232,UniRef:UniRef90_P95232
contig_1	Pyrodigal	gene	2607014	2608132	.	-	.	ID=GCA000153685_02463_gene;locus_tag=GCA000153685_02463
contig_1	Pyrodigal	CDS	2607014	2608132	.	-	0	ID=GCA000153685_02463;Name=Nitroreductase domain-containing protein;locus_tag=GCA000153685_02463;product=Nitroreductase domain-containing protein;Parent=GCA000153685_02463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412001.1,SO:0001217,UniParc:UPI00001650E9,UniRef:UniRef100_A0A1R3Y1A9,UniRef:UniRef50_P95233,UniRef:UniRef90_P95233
contig_1	Pyrodigal	gene	2608252	2609037	.	-	.	ID=GCA000153685_02464_gene;locus_tag=GCA000153685_02464;gene=moeW
contig_1	Pyrodigal	CDS	2608252	2609037	.	-	0	ID=GCA000153685_02464;Name=putative molybdopterin biosynthesis protein MoeW;locus_tag=GCA000153685_02464;product=putative molybdopterin biosynthesis protein MoeW;gene=moeW;Parent=GCA000153685_02464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899277.1,SO:0001217,UniParc:UPI0000EF47FF,UniRef:UniRef100_P95234,UniRef:UniRef50_A0A517Z0Q4,UniRef:UniRef90_P95234
contig_1	Pyrodigal	gene	2609838	2612723	.	+	.	ID=GCA000153685_02465_gene;locus_tag=GCA000153685_02465;gene=mmpL9
contig_1	Pyrodigal	CDS	2609838	2612723	.	+	0	ID=GCA000153685_02465;Name=RND transporter MmpL9;locus_tag=GCA000153685_02465;product=RND transporter MmpL9;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0042783;gene=mmpL9;Parent=GCA000153685_02465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899278,RefSeq:WP_015345125.1,SO:0001217,UniParc:UPI0002A854FD,UniRef:UniRef100_A0A0H3LI83,UniRef:UniRef50_P9WJV3,UniRef:UniRef90_P9WJU3
contig_1	Pyrodigal	gene	2612809	2613345	.	-	.	ID=GCA000153685_02466_gene;locus_tag=GCA000153685_02466
contig_1	Pyrodigal	CDS	2612809	2613345	.	-	0	ID=GCA000153685_02466;Name=hypothetical protein;locus_tag=GCA000153685_02466;product=hypothetical protein;Parent=GCA000153685_02466_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	2613321	2614049	.	-	.	ID=GCA000153685_02467_gene;locus_tag=GCA000153685_02467
contig_1	Pyrodigal	CDS	2613321	2614049	.	-	0	ID=GCA000153685_02467;Name=hypothetical protein;locus_tag=GCA000153685_02467;product=hypothetical protein;Parent=GCA000153685_02467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF00934.25
contig_1	tRNAscan-SE	gene	2614548	2614620	.	-	.	ID=GCA000153685_02468_gene;locus_tag=GCA000153685_02468;gene=trnN
contig_1	tRNAscan-SE	tRNA	2614548	2614620	.	-	.	ID=GCA000153685_02468;Name=tRNA-Asn(gtt);locus_tag=GCA000153685_02468;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000153685_02468_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	2614723	2615157	.	+	.	ID=GCA000153685_02469_gene;locus_tag=GCA000153685_02469
contig_1	Pyrodigal	CDS	2614723	2615157	.	+	0	ID=GCA000153685_02469;Name=Lipoprotein;locus_tag=GCA000153685_02469;product=Lipoprotein;Parent=GCA000153685_02469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6A4,UniRef:UniRef100_A0A0H3LBG8,UniRef:UniRef50_A0A0H3LBG8,UniRef:UniRef90_A0A0H3LBG8
contig_1	Pyrodigal	gene	2615377	2615670	.	+	.	ID=GCA000153685_02470_gene;locus_tag=GCA000153685_02470
contig_1	Pyrodigal	CDS	2615377	2615670	.	+	0	ID=GCA000153685_02470;Name=Transmembrane protein;locus_tag=GCA000153685_02470;product=Transmembrane protein;Parent=GCA000153685_02470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBF8,UniRef:UniRef100_Q7D7A5,UniRef:UniRef50_A1TBP3,UniRef:UniRef90_A0A2I7W9B8
contig_1	Pyrodigal	gene	2615674	2617593	.	-	.	ID=GCA000153685_02471_gene;locus_tag=GCA000153685_02471;gene=dnaG
contig_1	Pyrodigal	CDS	2615674	2617593	.	-	0	ID=GCA000153685_02471;Name=DNA primase;locus_tag=GCA000153685_02471;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003896,GO:0005737,GO:0005886,GO:0006269,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000153685_02471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02316,RefSeq:WP_003412049.1,SO:0001217,UniParc:UPI00001321E4,UniRef:UniRef100_P9WNW1,UniRef:UniRef50_P9WNW1,UniRef:UniRef90_P9WNW1;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	2617598	2618893	.	-	.	ID=GCA000153685_02472_gene;locus_tag=GCA000153685_02472;gene=dgt
contig_1	Pyrodigal	CDS	2617598	2618893	.	-	0	ID=GCA000153685_02472;Name=deoxyguanosinetriphosphate triphosphohydrolase;locus_tag=GCA000153685_02472;product=deoxyguanosinetriphosphate triphosphohydrolase;Dbxref=GO:0000287,GO:0005886,GO:0006203,GO:0008832,GO:0016793;gene=dgt;Parent=GCA000153685_02472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01129,RefSeq:WP_003899281.1,SO:0001217,UniParc:UPI000012922F,UniRef:UniRef100_P9WNY7,UniRef:UniRef50_P9WNY7,UniRef:UniRef90_P9WNY7;ec_number=3.1.5.1
contig_1	Pyrodigal	gene	2618962	2620944	.	+	.	ID=GCA000153685_02473_gene;locus_tag=GCA000153685_02473
contig_1	Pyrodigal	CDS	2618962	2620944	.	+	0	ID=GCA000153685_02473;Name=UPF0603 protein Rv2345;locus_tag=GCA000153685_02473;product=UPF0603 protein Rv2345;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_02473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899282.1,SO:0001217,UniParc:UPI00000D0F69,UniRef:UniRef100_P9WFJ5,UniRef:UniRef50_P9WFJ5,UniRef:UniRef90_P9WFJ5
contig_1	Pyrodigal	gene	2621029	2621313	.	-	.	ID=GCA000153685_02474_gene;locus_tag=GCA000153685_02474;gene=esxO
contig_1	Pyrodigal	CDS	2621029	2621313	.	-	0	ID=GCA000153685_02474;Name=type VII secretion system effector EsxO;locus_tag=GCA000153685_02474;product=type VII secretion system effector EsxO;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=esxO;Parent=GCA000153685_02474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899283,RefSeq:WP_003899283.1,SO:0001217,UniParc:UPI0000036DD7,UniRef:UniRef100_P9WNI7,UniRef:UniRef50_P9WNI7,UniRef:UniRef90_P9WNI7
contig_1	Pyrodigal	gene	2621364	2621660	.	-	.	ID=GCA000153685_02475_gene;locus_tag=GCA000153685_02475;gene=esxJ
contig_1	Pyrodigal	CDS	2621364	2621660	.	-	0	ID=GCA000153685_02475;Name=type VII secretion system ESX-5 protein EsxJ;locus_tag=GCA000153685_02475;product=type VII secretion system ESX-5 protein EsxJ;Dbxref=GO:0005576;gene=esxJ;Parent=GCA000153685_02475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003405345,RefSeq:WP_003900502.1,SO:0001217,UniParc:UPI000012A198,UniRef:UniRef100_P9WNI5,UniRef:UniRef50_P9WNJ7,UniRef:UniRef90_P9WNI5
contig_1	Pyrodigal	gene	2621795	2622121	.	-	.	ID=GCA000153685_02476_gene;locus_tag=GCA000153685_02476
contig_1	Pyrodigal	CDS	2621795	2622121	.	-	0	ID=GCA000153685_02476;Name=PPE family protein;locus_tag=GCA000153685_02476;product=PPE family protein;Parent=GCA000153685_02476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412119.1,SO:0001217,UniParc:UPI0000036DD8,UniRef:UniRef100_P95244,UniRef:UniRef50_A0A1E3SKD4,UniRef:UniRef90_R4MIN5
contig_1	Pyrodigal	gene	2622313	2623866	.	-	.	ID=GCA000153685_02477_gene;locus_tag=GCA000153685_02477;gene=plcC
contig_1	Pyrodigal	CDS	2622313	2623866	.	-	0	ID=GCA000153685_02477;Name=phospholipase C;locus_tag=GCA000153685_02477;product=phospholipase C;Dbxref=GO:0005576,GO:0034480,GO:0052008;gene=plcC;Parent=GCA000153685_02477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000013197E,UniRef:UniRef100_P9WIB1,UniRef:UniRef50_P9WIB3,UniRef:UniRef90_P9WIB1,VFDB:VFC0235,VFDB:VFG001400;ec_number=3.1.4.3
contig_1	Pyrodigal	gene	2623922	2625487	.	-	.	ID=GCA000153685_02478_gene;locus_tag=GCA000153685_02478;gene=plcB
contig_1	Pyrodigal	CDS	2623922	2625487	.	-	0	ID=GCA000153685_02478;Name=membrane-associated phospholipase B;locus_tag=GCA000153685_02478;product=membrane-associated phospholipase B;Dbxref=GO:0004629,GO:0004767,GO:0005576,GO:0034480,GO:0052008;gene=plcB;Parent=GCA000153685_02478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01114,SO:0001217,UniParc:UPI0000131977,UniRef:UniRef100_P9WIB3,UniRef:UniRef50_P9WIB3,UniRef:UniRef90_P9WIB3,VFDB:VFC0235,VFDB:VFG001401;ec_number=3.1.4.3
contig_1	Pyrodigal	gene	2625678	2627159	.	-	.	ID=GCA000153685_02479_gene;locus_tag=GCA000153685_02479;gene=plcA
contig_1	Pyrodigal	CDS	2625678	2627159	.	-	0	ID=GCA000153685_02479;Name=membrane-associated phospholipase A;locus_tag=GCA000153685_02479;product=membrane-associated phospholipase A;Dbxref=GO:0004629,GO:0004767,GO:0005576,GO:0034480,GO:0052008;gene=plcA;Parent=GCA000153685_02479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01114,SO:0001217,UniParc:UPI00005EE6A6,UniRef:UniRef100_P9WIB5,UniRef:UniRef50_P9WIB3,UniRef:UniRef90_P9WIB5,VFDB:VFC0235,VFDB:VFG001402;ec_number=3.1.4.3
contig_1	Pyrodigal	gene	2627760	2627933	.	+	.	ID=GCA000153685_02480_gene;locus_tag=GCA000153685_02480
contig_1	Pyrodigal	CDS	2627760	2627933	.	+	0	ID=GCA000153685_02480;Name=hypothetical protein;locus_tag=GCA000153685_02480;product=hypothetical protein;Parent=GCA000153685_02480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009936673.1,SO:0001217,UniParc:UPI00005EE6A7,UniRef:UniRef100_A0A0H3LI99,UniRef:UniRef50_A0A0H3LI99,UniRef:UniRef90_A0A0H3LI99
contig_1	Pyrodigal	gene	2628064	2629332	.	-	.	ID=GCA000153685_02481_gene;locus_tag=GCA000153685_02481;gene=pPE38
contig_1	Pyrodigal	CDS	2628064	2629332	.	-	0	ID=GCA000153685_02481;Name=putative PPE family protein PPE38;locus_tag=GCA000153685_02481;product=putative PPE family protein PPE38;Dbxref=GO:0052572;gene=pPE38;Parent=GCA000153685_02481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045B4BF5,UniRef:UniRef100_P9WHZ9,UniRef:UniRef50_P9WHZ9,UniRef:UniRef90_P9WHZ9
contig_1	Pyrodigal	gene	2629669	2631510	.	-	.	ID=GCA000153685_02482_gene;locus_tag=GCA000153685_02482
contig_1	Pyrodigal	CDS	2629669	2631510	.	-	0	ID=GCA000153685_02482;Name=Conserved protein of putative function%2C PPE family protein (PPE40);locus_tag=GCA000153685_02482;product=Conserved protein of putative function%2C PPE family protein (PPE40);Parent=GCA000153685_02482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900506.1,SO:0001217,UniParc:UPI0001277FA4,UniRef:UniRef100_UPI0001277FA4,UniRef:UniRef50_P9WHZ7,UniRef:UniRef90_A0A655JGL6
contig_1	Pyrodigal	gene	2631546	2631872	.	+	.	ID=GCA000153685_02483_gene;locus_tag=GCA000153685_02483;gene=tnp
contig_1	Pyrodigal	CDS	2631546	2631872	.	+	0	ID=GCA000153685_02483;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_02483;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_02483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	2631923	2632807	.	+	.	ID=GCA000153685_02484_gene;locus_tag=GCA000153685_02484;gene=tnp
contig_1	Pyrodigal	CDS	2631923	2632807	.	+	0	ID=GCA000153685_02484;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_02484;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_02484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	2633633	2635480	.	-	.	ID=GCA000153685_02485_gene;locus_tag=GCA000153685_02485;gene=pPE40
contig_1	Pyrodigal	CDS	2633633	2635480	.	-	0	ID=GCA000153685_02485;Name=putative PPE family protein PPE40;locus_tag=GCA000153685_02485;product=putative PPE family protein PPE40;Dbxref=GO:0052572;gene=pPE40;Parent=GCA000153685_02485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904827.1,SO:0001217,UniParc:UPI00000D5ED0,UniRef:UniRef100_P9WHZ7,UniRef:UniRef50_P9WHZ7,UniRef:UniRef90_P9WHZ7
contig_1	Pyrodigal	gene	2635618	2637072	.	-	.	ID=GCA000153685_02486_gene;locus_tag=GCA000153685_02486;gene=glyQS
contig_1	Pyrodigal	CDS	2635618	2637072	.	-	0	ID=GCA000153685_02486;Name=glycine--tRNA ligase;locus_tag=GCA000153685_02486;product=glycine--tRNA ligase;Dbxref=GO:0000166,GO:0004081,GO:0004820,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006418,GO:0006426,GO:0015966,GO:0046983,GO:0070062,GO:1903561,GO:1990742;gene=glyQS;Parent=GCA000153685_02486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0423,COG:J,KEGG:K01880,SO:0001217,UniParc:UPI00035854B7,UniRef:UniRef100_A0A0E7Y4V3,UniRef:UniRef50_P9WFV7,UniRef:UniRef90_P9WFV7;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	2637191	2637598	.	+	.	ID=GCA000153685_02487_gene;locus_tag=GCA000153685_02487;gene=smtB
contig_1	Pyrodigal	CDS	2637191	2637598	.	+	0	ID=GCA000153685_02487;Name=HTH-type transcriptional repressor SmtB;locus_tag=GCA000153685_02487;product=HTH-type transcriptional repressor SmtB;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0010043,GO:0046872;gene=smtB;Parent=GCA000153685_02487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412205.1,SO:0001217,UniParc:UPI00000D5FAB,UniRef:UniRef100_P9WMI5,UniRef:UniRef50_P9WMI5,UniRef:UniRef90_P9WMI5
contig_1	Pyrodigal	gene	2637595	2637987	.	+	.	ID=GCA000153685_02488_gene;locus_tag=GCA000153685_02488;gene=zur
contig_1	Pyrodigal	CDS	2637595	2637987	.	+	0	ID=GCA000153685_02488;Name=zinc uptake transcriptional repressor Zur;locus_tag=GCA000153685_02488;product=zinc uptake transcriptional repressor Zur;Dbxref=GO:0000976,GO:0001217,GO:0003700,GO:0005829,GO:0005886,GO:0008270,GO:0010043,GO:0032993,GO:0042803,GO:0045892,GO:0045893,GO:1900376;gene=zur;Parent=GCA000153685_02488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899290,BlastRules:WP_004398578,RefSeq:WP_003899290.1,SO:0001217,UniParc:UPI00000D0F43,UniRef:UniRef100_P9WN85,UniRef:UniRef50_P9WN85,UniRef:UniRef90_P9WN85
contig_1	Pyrodigal	gene	2638095	2638523	.	-	.	ID=GCA000153685_02489_gene;locus_tag=GCA000153685_02489
contig_1	Pyrodigal	CDS	2638095	2638523	.	-	0	ID=GCA000153685_02489;Name=Histidine kinase;locus_tag=GCA000153685_02489;product=Histidine kinase;Parent=GCA000153685_02489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412208.1,SO:0001217,UniParc:UPI00001650ED,UniRef:UniRef100_A0A1R3Y0X8,UniRef:UniRef50_A0A1A3CT88,UniRef:UniRef90_O05838
contig_1	Pyrodigal	gene	2638523	2639413	.	-	.	ID=GCA000153685_02490_gene;locus_tag=GCA000153685_02490;gene=uppS
contig_1	Pyrodigal	CDS	2638523	2639413	.	-	0	ID=GCA000153685_02490;Name=decaprenyl diphosphate synthase;locus_tag=GCA000153685_02490;product=decaprenyl diphosphate synthase;Dbxref=GO:0000287,GO:0005829,GO:0005886,GO:0008834,GO:0016094,GO:0030145,GO:0033850,GO:0045547,GO:0052923;gene=uppS;Parent=GCA000153685_02490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14215,RefSeq:WP_003412212.1,SO:0001217,UniParc:UPI0000137D0F,UniRef:UniRef100_P9WFF7,UniRef:UniRef50_P9WFF7,UniRef:UniRef90_P9WFF7;ec_number=2.5.1.87
contig_1	Pyrodigal	gene	2639406	2640203	.	-	.	ID=GCA000153685_02491_gene;locus_tag=GCA000153685_02491;gene=recO
contig_1	Pyrodigal	CDS	2639406	2640203	.	-	0	ID=GCA000153685_02491;Name=DNA repair protein RecO;locus_tag=GCA000153685_02491;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000153685_02491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03584,RefSeq:WP_003412222.1,SO:0001217,UniParc:UPI00001335A6,UniRef:UniRef100_P9WHI5,UniRef:UniRef50_P9WHI5,UniRef:UniRef90_P9WHI5
contig_1	Pyrodigal	gene	2640265	2641719	.	+	.	ID=GCA000153685_02492_gene;locus_tag=GCA000153685_02492;gene=amiA2
contig_1	Pyrodigal	CDS	2640265	2641719	.	+	0	ID=GCA000153685_02492;Name=amidase;locus_tag=GCA000153685_02492;product=amidase;Dbxref=GO:0004040;gene=amiA2;Parent=GCA000153685_02492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412223.1,SO:0001217,UniParc:UPI0000125972,UniRef:UniRef100_P9WQ99,UniRef:UniRef50_P9WQ99,UniRef:UniRef90_P9WQ99;ec_number=3.5.1.4
contig_1	Pyrodigal	gene	2641716	2642645	.	-	.	ID=GCA000153685_02493_gene;locus_tag=GCA000153685_02493;gene=era
contig_1	Pyrodigal	CDS	2641716	2642645	.	-	0	ID=GCA000153685_02493;Name=GTPase Era;locus_tag=GCA000153685_02493;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005576,GO:0005829,GO:0019843,GO:0030313,GO:0043024;gene=era;Parent=GCA000153685_02493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6AC,UniRef:UniRef100_A0A0H3LCD4,UniRef:UniRef50_A0R0S7,UniRef:UniRef90_P9WNK9
contig_1	Pyrodigal	gene	2642692	2643033	.	-	.	ID=GCA000153685_02494_gene;locus_tag=GCA000153685_02494
contig_1	Pyrodigal	CDS	2642692	2643033	.	-	0	ID=GCA000153685_02494;Name=Cytidine deaminase;locus_tag=GCA000153685_02494;product=Cytidine deaminase;Parent=GCA000153685_02494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412226.1,SO:0001217,UniParc:UPI00000CCAE3,UniRef:UniRef100_O05833,UniRef:UniRef50_A0A951N869,UniRef:UniRef90_O05833
contig_1	Pyrodigal	gene	2643005	2644312	.	-	.	ID=GCA000153685_02495_gene;locus_tag=GCA000153685_02495
contig_1	Pyrodigal	CDS	2643005	2644312	.	-	0	ID=GCA000153685_02495;Name=UPF0053 protein Rv2366c;locus_tag=GCA000153685_02495;product=UPF0053 protein Rv2366c;Dbxref=GO:0005886,GO:0050660;Parent=GCA000153685_02495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03699,RefSeq:WP_003412229.1,SO:0001217,UniParc:UPI000013BA98,UniRef:UniRef100_P9WFP1,UniRef:UniRef50_P9WFP1,UniRef:UniRef90_P9WFP1
contig_1	Pyrodigal	gene	2644309	2644842	.	-	.	ID=GCA000153685_02496_gene;locus_tag=GCA000153685_02496;gene=ybeY
contig_1	Pyrodigal	CDS	2644309	2644842	.	-	0	ID=GCA000153685_02496;Name=rRNA maturation RNase YbeY;locus_tag=GCA000153685_02496;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000153685_02496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_003899292.1,SO:0001217,UniParc:UPI000013BA9B,UniRef:UniRef100_P9WGX9,UniRef:UniRef50_B2HLB7,UniRef:UniRef90_B2HLB7;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2644861	2645919	.	-	.	ID=GCA000153685_02497_gene;locus_tag=GCA000153685_02497;gene=phoH
contig_1	Pyrodigal	CDS	2644861	2645919	.	-	0	ID=GCA000153685_02497;Name=PhoH-like protein;locus_tag=GCA000153685_02497;product=PhoH-like protein;Dbxref=GO:0003723,GO:0005524,GO:0005829,GO:0005886;gene=phoH;Parent=GCA000153685_02497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1702,COG:T,KEGG:K06217,RefSeq:WP_003412235.1,SO:0001217,UniParc:UPI00001319C4,UniRef:UniRef100_P9WIA3,UniRef:UniRef50_P9WIA3,UniRef:UniRef90_P9WIA3
contig_1	Pyrodigal	gene	2646190	2647503	.	-	.	ID=GCA000153685_02498_gene;locus_tag=GCA000153685_02498
contig_1	Pyrodigal	CDS	2646190	2647503	.	-	0	ID=GCA000153685_02498;Name=Transcriptional activator protein;locus_tag=GCA000153685_02498;product=Transcriptional activator protein;Parent=GCA000153685_02498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899293.1,SO:0001217,UniParc:UPI00000D11AD,UniRef:UniRef100_O05828,UniRef:UniRef50_A0A7I7NPH9,UniRef:UniRef90_O05828
contig_1	Pyrodigal	gene	2647698	2647883	.	+	.	ID=GCA000153685_02499_gene;locus_tag=GCA000153685_02499
contig_1	Pyrodigal	CDS	2647698	2647883	.	+	0	ID=GCA000153685_02499;Name=PE-PGRS family protein PE_PGRS40;locus_tag=GCA000153685_02499;product=PE-PGRS family protein PE_PGRS40;Parent=GCA000153685_02499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412240.1,SO:0001217,UniParc:UPI00001652E5,UniRef:UniRef100_Q79FE9,UniRef:UniRef50_R4MAF2,UniRef:UniRef90_Q79FE9
contig_1	Pyrodigal	gene	2647883	2648023	.	+	.	ID=GCA000153685_02500_gene;locus_tag=GCA000153685_02500
contig_1	Pyrodigal	CDS	2647883	2648023	.	+	0	ID=GCA000153685_02500;Name=hypothetical protein;locus_tag=GCA000153685_02500;product=hypothetical protein;Parent=GCA000153685_02500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D224,UniRef:UniRef100_A0A0H3LFP3,UniRef:UniRef50_A0A0H3LFP3,UniRef:UniRef90_A0A0H3LFP3
contig_1	Pyrodigal	gene	2647982	2648770	.	-	.	ID=GCA000153685_02501_gene;locus_tag=GCA000153685_02501;gene=rsmE
contig_1	Pyrodigal	CDS	2647982	2648770	.	-	0	ID=GCA000153685_02501;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000153685_02501;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070042,GO:0070475;gene=rsmE;Parent=GCA000153685_02501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09761,RefSeq:WP_003900509.1,SO:0001217,UniParc:UPI000013BA9F,UniRef:UniRef100_P9WGX1,UniRef:UniRef50_P9WGX1,UniRef:UniRef90_P9WGX1;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	2648784	2649932	.	-	.	ID=GCA000153685_02502_gene;locus_tag=GCA000153685_02502;gene=dnaJ
contig_1	Pyrodigal	CDS	2648784	2649932	.	-	0	ID=GCA000153685_02502;Name=molecular chaperone DnaJ;locus_tag=GCA000153685_02502;product=molecular chaperone DnaJ;Dbxref=GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009274,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000153685_02502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_003899294.1,SO:0001217,UniParc:UPI0000129646,UniRef:UniRef100_P9WNV7,UniRef:UniRef50_P9WNV7,UniRef:UniRef90_P9WNV7
contig_1	Pyrodigal	gene	2650007	2651038	.	-	.	ID=GCA000153685_02503_gene;locus_tag=GCA000153685_02503;gene=hrcA
contig_1	Pyrodigal	CDS	2650007	2651038	.	-	0	ID=GCA000153685_02503;Name=heat-inducible transcriptional repressor HrcA;locus_tag=GCA000153685_02503;product=heat-inducible transcriptional repressor HrcA;Dbxref=GO:0003677,GO:0006355,GO:0045892;gene=hrcA;Parent=GCA000153685_02503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1420,COG:K,KEGG:K03705,RefSeq:WP_003412252.1,SO:0001217,UniParc:UPI000012CBA4,UniRef:UniRef100_P9WMK3,UniRef:UniRef50_P9WMK3,UniRef:UniRef90_P9WMK3
contig_1	Pyrodigal	gene	2651210	2651527	.	+	.	ID=GCA000153685_02504_gene;locus_tag=GCA000153685_02504;gene=vapB6
contig_1	Pyrodigal	CDS	2651210	2651527	.	+	0	ID=GCA000153685_02504;Name=Type II toxin-antitoxin system VapB family antitoxin;locus_tag=GCA000153685_02504;product=Type II toxin-antitoxin system VapB family antitoxin;gene=vapB6;Parent=GCA000153685_02504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5450,COG:K,RefSeq:WP_003412258.1,SO:0001217,UniParc:UPI00000D107B,UniRef:UniRef100_O05823,UniRef:UniRef50_W9G7X3,UniRef:UniRef90_O05823
contig_1	Pyrodigal	gene	2651554	2652060	.	-	.	ID=GCA000153685_02505_gene;locus_tag=GCA000153685_02505;gene=mtb12
contig_1	Pyrodigal	CDS	2651554	2652060	.	-	0	ID=GCA000153685_02505;Name=Low molecular weight antigen MTB12;locus_tag=GCA000153685_02505;product=Low molecular weight antigen MTB12;Dbxref=GO:0005576;gene=mtb12;Parent=GCA000153685_02505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412264.1,SO:0001217,UniParc:UPI000004A97F,UniRef:UniRef100_P9WIN7,UniRef:UniRef50_P9WIN7,UniRef:UniRef90_P9WIN7
contig_1	Pyrodigal	gene	2652160	2652375	.	-	.	ID=GCA000153685_02506_gene;locus_tag=GCA000153685_02506;gene=mbtH
contig_1	Pyrodigal	CDS	2652160	2652375	.	-	0	ID=GCA000153685_02506;Name=mycobactin NRPS accessory protein MbtH;locus_tag=GCA000153685_02506;product=mycobactin NRPS accessory protein MbtH;Dbxref=GO:0005829,GO:0019290;gene=mbtH;Parent=GCA000153685_02506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412265,BlastRules:WP_085083638,RefSeq:WP_003412265.1,SO:0001217,UniParc:UPI00001650F1,UniRef:UniRef100_P59965,UniRef:UniRef50_P9WIP5,UniRef:UniRef90_P9WIP5
contig_1	Pyrodigal	gene	2652353	2653648	.	-	.	ID=GCA000153685_02507_gene;locus_tag=GCA000153685_02507;gene=mbtG
contig_1	Pyrodigal	CDS	2652353	2653648	.	-	0	ID=GCA000153685_02507;Name=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;locus_tag=GCA000153685_02507;product=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;Dbxref=GO:0047091;gene=mbtG;Parent=GCA000153685_02507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899296,RefSeq:WP_003899296.1,SO:0001217,UniParc:UPI00000D10AC,UniRef:UniRef100_P9WKF7,UniRef:UniRef50_P9WKF7,UniRef:UniRef90_P9WKF7;ec_number=1.14.13.59
contig_1	Pyrodigal	gene	2653645	2658030	.	-	.	ID=GCA000153685_02508_gene;locus_tag=GCA000153685_02508;gene=mbtF
contig_1	Pyrodigal	CDS	2653645	2658030	.	-	0	ID=GCA000153685_02508;Name=Peptide synthetase MbtF (peptide synthase);locus_tag=GCA000153685_02508;product=Peptide synthetase MbtF (peptide synthase);gene=mbtF;Parent=GCA000153685_02508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001650F2,UniRef:UniRef100_Q7D792,UniRef:UniRef50_O05819,UniRef:UniRef90_O05819,VFDB:VFC0272,VFDB:VFG001820
contig_1	Pyrodigal	gene	2658012	2663207	.	-	.	ID=GCA000153685_02509_gene;locus_tag=GCA000153685_02509;gene=mbtE
contig_1	Pyrodigal	CDS	2658012	2663207	.	-	0	ID=GCA000153685_02509;Name=mycobactin non-ribosomal peptide synthetase MbtE;locus_tag=GCA000153685_02509;product=mycobactin non-ribosomal peptide synthetase MbtE;gene=mbtE;Parent=GCA000153685_02509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899297,RefSeq:WP_003899297.1,SO:0001217,UniParc:UPI00005EE6B0,UniRef:UniRef100_A0A0H3LBL0,UniRef:UniRef50_A0A0H3LBL0,UniRef:UniRef90_A0A0H3LBL0
contig_1	Pyrodigal	gene	2663200	2666214	.	-	.	ID=GCA000153685_02510_gene;locus_tag=GCA000153685_02510;gene=mbtD
contig_1	Pyrodigal	CDS	2663200	2666214	.	-	0	ID=GCA000153685_02510;Name=Polyketide synthetase MbtD (polyketide synthase);locus_tag=GCA000153685_02510;product=Polyketide synthetase MbtD (polyketide synthase);gene=mbtD;Parent=GCA000153685_02510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412277.1,SO:0001217,UniParc:UPI00001652E7,UniRef:UniRef100_P71719,UniRef:UniRef50_K5BFJ9,UniRef:UniRef90_P71719,VFDB:VFC0272,VFDB:VFG001822
contig_1	Pyrodigal	gene	2666214	2667548	.	-	.	ID=GCA000153685_02511_gene;locus_tag=GCA000153685_02511;gene=mbtC
contig_1	Pyrodigal	CDS	2666214	2667548	.	-	0	ID=GCA000153685_02511;Name=polyketide synthetase MbtC;locus_tag=GCA000153685_02511;product=polyketide synthetase MbtC;gene=mbtC;Parent=GCA000153685_02511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412278,RefSeq:WP_003412278.1,SO:0001217,UniParc:UPI00001652E8,UniRef:UniRef100_P71718,UniRef:UniRef50_A0A498QBC9,UniRef:UniRef90_P71718
contig_1	Pyrodigal	gene	2667538	2671782	.	-	.	ID=GCA000153685_02512_gene;locus_tag=GCA000153685_02512;gene=mbtB
contig_1	Pyrodigal	CDS	2667538	2671782	.	-	0	ID=GCA000153685_02512;Name=phenyloxazoline synthase MbtB;locus_tag=GCA000153685_02512;product=phenyloxazoline synthase MbtB;Dbxref=GO:0000036,GO:0005737,GO:0005886,GO:0009274,GO:0010106,GO:0016874,GO:0019290,GO:0019540,GO:0031177,GO:0043041,GO:0044550,GO:0052572;gene=mbtB;Parent=GCA000153685_02512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003895882,BlastRules:WP_003899299,RefSeq:WP_003899299.1,SO:0001217,UniParc:UPI00000D5001,UniRef:UniRef100_P9WQ63,UniRef:UniRef50_P9WQ63,UniRef:UniRef90_P9WQ63;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	2671881	2673578	.	+	.	ID=GCA000153685_02513_gene;locus_tag=GCA000153685_02513;gene=mbtA
contig_1	Pyrodigal	CDS	2671881	2673578	.	+	0	ID=GCA000153685_02513;Name=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;locus_tag=GCA000153685_02513;product=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;Dbxref=GO:0005524,GO:0010106,GO:0016779,GO:0016878,GO:0019290;gene=mbtA;Parent=GCA000153685_02513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412282,RefSeq:WP_003412282.1,SO:0001217,UniParc:UPI00000D1151,UniRef:UniRef100_P71716,UniRef:UniRef50_P71716,UniRef:UniRef90_P71716;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	2673674	2674594	.	+	.	ID=GCA000153685_02514_gene;locus_tag=GCA000153685_02514;gene=mbtJ
contig_1	Pyrodigal	CDS	2673674	2674594	.	+	0	ID=GCA000153685_02514;Name=Putative acetyl hydrolase MbtJ;locus_tag=GCA000153685_02514;product=Putative acetyl hydrolase MbtJ;gene=mbtJ;Parent=GCA000153685_02514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412284.1,SO:0001217,UniParc:UPI00001652E9,UniRef:UniRef100_Q79FE8,UniRef:UniRef50_A0A5S9R4B0,UniRef:UniRef90_Q79FE8,VFDB:VFC0272,VFDB:VFG009553
contig_1	Pyrodigal	gene	2674598	2675950	.	-	.	ID=GCA000153685_02515_gene;locus_tag=GCA000153685_02515;gene=mbtI
contig_1	Pyrodigal	CDS	2674598	2675950	.	-	0	ID=GCA000153685_02515;Name=mycobactin biosynthesis salicylate synthase MbtI;locus_tag=GCA000153685_02515;product=mycobactin biosynthesis salicylate synthase MbtI;Dbxref=GO:0000162,GO:0000287,GO:0004106,GO:0005886,GO:0008909,GO:0009697,GO:0010106,GO:0016833,GO:0019540,GO:0043904,GO:0052572;gene=mbtI;Parent=GCA000153685_02515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412287,BlastRules:WP_011729893,KEGG:K04781,RefSeq:WP_003412287.1,SO:0001217,UniParc:UPI00000D5F27,UniRef:UniRef100_P9WFX1,UniRef:UniRef50_P9WFX1,UniRef:UniRef90_P9WFX1;ec_number=5.4.4.2
contig_1	Pyrodigal	gene	2676403	2676612	.	+	.	ID=GCA000153685_02516_gene;locus_tag=GCA000153685_02516
contig_1	Pyrodigal	CDS	2676403	2676612	.	+	0	ID=GCA000153685_02516;Name=putative protein Rv2386A/RVBD_2386A;locus_tag=GCA000153685_02516;product=putative protein Rv2386A/RVBD_2386A;Parent=GCA000153685_02516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899302.1,SO:0001217,UniParc:UPI00000D2CCA,UniRef:UniRef100_I6YD99,UniRef:UniRef50_I6YD99,UniRef:UniRef90_I6YD99
contig_1	Pyrodigal	gene	2676710	2677963	.	+	.	ID=GCA000153685_02517_gene;locus_tag=GCA000153685_02517
contig_1	Pyrodigal	CDS	2676710	2677963	.	+	0	ID=GCA000153685_02517;Name=Sodium-dependent bicarbonate transport family permease;locus_tag=GCA000153685_02517;product=Sodium-dependent bicarbonate transport family permease;Parent=GCA000153685_02517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07086,RefSeq:WP_003412289.1,SO:0001217,UniParc:UPI00001652EA,UniRef:UniRef100_P71757,UniRef:UniRef50_I2AB83,UniRef:UniRef90_Q7D784
contig_1	Pyrodigal	gene	2677960	2679132	.	-	.	ID=GCA000153685_02518_gene;locus_tag=GCA000153685_02518;gene=hemW
contig_1	Pyrodigal	CDS	2677960	2679132	.	-	0	ID=GCA000153685_02518;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000153685_02518;product=radical SAM family heme chaperone HemW;Dbxref=GO:0004109,GO:0005737,GO:0006779,GO:0046872,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000153685_02518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412290.1,SO:0001217,UniParc:UPI00001650F4,UniRef:UniRef100_P9WP73,UniRef:UniRef50_P9WP73,UniRef:UniRef90_P9WP73
contig_1	Pyrodigal	gene	2679193	2679657	.	-	.	ID=GCA000153685_02519_gene;locus_tag=GCA000153685_02519;gene=rpfD
contig_1	Pyrodigal	CDS	2679193	2679657	.	-	0	ID=GCA000153685_02519;Name=resuscitation-promoting factor protein RpfD;locus_tag=GCA000153685_02519;product=resuscitation-promoting factor protein RpfD;Dbxref=GO:0005576,GO:0005886,GO:0009372,GO:0010628,GO:0010629,GO:0016787,GO:0042127,GO:0085016;gene=rpfD;Parent=GCA000153685_02519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412293,KEGG:K21690,RefSeq:WP_003412293.1,SO:0001217,UniParc:UPI0000030109,UniRef:UniRef100_P9WG27,UniRef:UniRef50_P9WG27,UniRef:UniRef90_P9WG27;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2679654	2680220	.	-	.	ID=GCA000153685_02520_gene;locus_tag=GCA000153685_02520
contig_1	Pyrodigal	CDS	2679654	2680220	.	-	0	ID=GCA000153685_02520;Name=Mce associated membrane protein;locus_tag=GCA000153685_02520;product=Mce associated membrane protein;Parent=GCA000153685_02520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D8DB17,UniRef:UniRef100_P71754,UniRef:UniRef50_P71754,UniRef:UniRef90_P71754
contig_1	Pyrodigal	gene	2680648	2682315	.	+	.	ID=GCA000153685_02521_gene;locus_tag=GCA000153685_02521;gene=sirA
contig_1	Pyrodigal	CDS	2680648	2682315	.	+	0	ID=GCA000153685_02521;Name=sulfite reductase SirA;locus_tag=GCA000153685_02521;product=sulfite reductase SirA;Dbxref=GO:0000103,GO:0005829,GO:0009274,GO:0016002,GO:0020037,GO:0046872,GO:0050311,GO:0051539;gene=sirA;Parent=GCA000153685_02521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899303,BlastRules:WP_003972818,COG:COG0155,COG:P,RefSeq:WP_003899303.1,SO:0001217,UniParc:UPI00001650F5,UniRef:UniRef100_P9WJ03,UniRef:UniRef50_P9WJ03,UniRef:UniRef90_P9WJ03;ec_number=1.8.7.1
contig_1	Pyrodigal	gene	2682312	2683076	.	+	.	ID=GCA000153685_02522_gene;locus_tag=GCA000153685_02522;gene=cysH
contig_1	Pyrodigal	CDS	2682312	2683076	.	+	0	ID=GCA000153685_02522;Name=phosphoadenylyl-sulfate reductase;locus_tag=GCA000153685_02522;product=phosphoadenylyl-sulfate reductase;Dbxref=GO:0003824,GO:0004604,GO:0005829,GO:0005886,GO:0019344,GO:0019379,GO:0043866,GO:0046872,GO:0051539,GO:0070814;gene=cysH;Parent=GCA000153685_02522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00390,RefSeq:WP_003412303.1,SO:0001217,UniParc:UPI0000128CEC,UniRef:UniRef100_P9WIK3,UniRef:UniRef50_P9WIK3,UniRef:UniRef90_P9WIK3;ec_number=1.8.4.8
contig_1	Pyrodigal	gene	2683106	2683918	.	+	.	ID=GCA000153685_02523_gene;locus_tag=GCA000153685_02523
contig_1	Pyrodigal	CDS	2683106	2683918	.	+	0	ID=GCA000153685_02523;Name=Cobalamin (Vitamin b12) biosynthesis cbix protein;locus_tag=GCA000153685_02523;product=Cobalamin (Vitamin b12) biosynthesis cbix protein;Parent=GCA000153685_02523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B4690E,UniRef:UniRef100_A0A0U0RNN0,UniRef:UniRef50_A0A0U0RNN0,UniRef:UniRef90_A0A0U0RNN0
contig_1	Pyrodigal	gene	2683955	2685886	.	+	.	ID=GCA000153685_02524_gene;locus_tag=GCA000153685_02524
contig_1	Pyrodigal	CDS	2683955	2685886	.	+	0	ID=GCA000153685_02524;Name=Glutathione hydrolase proenzyme;locus_tag=GCA000153685_02524;product=Glutathione hydrolase proenzyme;Parent=GCA000153685_02524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900512.1,SO:0001217,UniParc:UPI0001277FF9,UniRef:UniRef100_A0A0H3LBM4,UniRef:UniRef50_A0A143Q7W7,UniRef:UniRef90_A0A0H3LBM4
contig_1	Pyrodigal	gene	2686017	2688020	.	+	.	ID=GCA000153685_02525_gene;locus_tag=GCA000153685_02525
contig_1	Pyrodigal	CDS	2686017	2688020	.	+	0	ID=GCA000153685_02525;Name=OPT family oligopeptide transporter;locus_tag=GCA000153685_02525;product=OPT family oligopeptide transporter;Dbxref=GO:0006857,GO:0016020,GO:0035673;Parent=GCA000153685_02525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899305.1,SO:0001217,UniParc:UPI00000D6003,UniRef:UniRef100_A5U589,UniRef:UniRef50_R7Y4A6,UniRef:UniRef90_A0AAQ2U445
contig_1	Infernal	gene	2688117	2688465	.	+	.	ID=GCA000153685_02526_gene;locus_tag=GCA000153685_02526;gene=Mcr7
contig_1	Infernal	ncRNA	2688117	2688465	6.4e-44	+	.	ID=GCA000153685_02526;Name=mcr7 sRNA;locus_tag=GCA000153685_02526;product=mcr7 sRNA;Dbxref=RFAM:RF02571;Parent=GCA000153685_02526_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02571
contig_1	Pyrodigal	gene	2688744	2689829	.	+	.	ID=GCA000153685_02527_gene;locus_tag=GCA000153685_02527
contig_1	Pyrodigal	CDS	2688744	2689829	.	+	0	ID=GCA000153685_02527;Name=PE-PGRS family protein PE_PGRS41;locus_tag=GCA000153685_02527;product=PE-PGRS family protein PE_PGRS41;Parent=GCA000153685_02527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031709686.1,SO:0001217,UniParc:UPI0003D93487,UniRef:UniRef100_V9MYR1,UniRef:UniRef50_A0A1A2WHL8,UniRef:UniRef90_Q79FE6
contig_1	Pyrodigal	gene	2689854	2690909	.	-	.	ID=GCA000153685_02528_gene;locus_tag=GCA000153685_02528;gene=cysA
contig_1	Pyrodigal	CDS	2689854	2690909	.	-	0	ID=GCA000153685_02528;Name=Sulfate/thiosulfate import ATP-binding protein CysA;locus_tag=GCA000153685_02528;product=Sulfate/thiosulfate import ATP-binding protein CysA;Dbxref=GO:0005524,GO:0005886,GO:0015419,GO:0016887,GO:0043190,GO:0102025,GO:1902358;gene=cysA;Parent=GCA000153685_02528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412325.1,SO:0001217,UniParc:UPI00001652EC,UniRef:UniRef100_P9WQM1,UniRef:UniRef50_P9WQM1,UniRef:UniRef90_P9WQM1;ec_number=7.3.2.3
contig_1	Pyrodigal	gene	2690926	2691744	.	-	.	ID=GCA000153685_02529_gene;locus_tag=GCA000153685_02529;gene=cysW
contig_1	Pyrodigal	CDS	2690926	2691744	.	-	0	ID=GCA000153685_02529;Name=sulfate ABC transporter permease subunit CysW;locus_tag=GCA000153685_02529;product=sulfate ABC transporter permease subunit CysW;Dbxref=GO:0005886,GO:0015419,GO:0055052,GO:1902358;gene=cysW;Parent=GCA000153685_02529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02047,RefSeq:WP_003412329.1,SO:0001217,UniParc:UPI00001650F6,UniRef:UniRef100_A0A0H3LBN0,UniRef:UniRef50_H0R0R6,UniRef:UniRef90_A5U592
contig_1	Pyrodigal	gene	2691741	2692592	.	-	.	ID=GCA000153685_02530_gene;locus_tag=GCA000153685_02530;gene=cysT
contig_1	Pyrodigal	CDS	2691741	2692592	.	-	0	ID=GCA000153685_02530;Name=sulfate ABC transporter permease subunit CysT;locus_tag=GCA000153685_02530;product=sulfate ABC transporter permease subunit CysT;Dbxref=GO:0005886,GO:0015419,GO:0055052,GO:1902358;gene=cysT;Parent=GCA000153685_02530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412332.1,SO:0001217,UniParc:UPI00000D6004,UniRef:UniRef100_P71745,UniRef:UniRef50_A0A7I7X2R3,UniRef:UniRef90_P71745
contig_1	Pyrodigal	gene	2692589	2693659	.	-	.	ID=GCA000153685_02531_gene;locus_tag=GCA000153685_02531
contig_1	Pyrodigal	CDS	2692589	2693659	.	-	0	ID=GCA000153685_02531;Name=Sulfate ABC transporter substrate-binding protein;locus_tag=GCA000153685_02531;product=Sulfate ABC transporter substrate-binding protein;Parent=GCA000153685_02531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412335.1,SO:0001217,UniParc:UPI00000D5FA4,UniRef:UniRef100_A5U594,UniRef:UniRef50_A0A164L2K0,UniRef:UniRef90_A5U594
contig_1	Pyrodigal	gene	2693987	2694181	.	-	.	ID=GCA000153685_02532_gene;locus_tag=GCA000153685_02532
contig_1	Pyrodigal	CDS	2693987	2694181	.	-	0	ID=GCA000153685_02532;Name=Transmembrane protein;locus_tag=GCA000153685_02532;product=Transmembrane protein;Parent=GCA000153685_02532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2CCE,UniRef:UniRef100_Q79FE4,UniRef:UniRef50_F5YZ19,UniRef:UniRef90_R4M7Y3
contig_1	Pyrodigal	gene	2694360	2696402	.	+	.	ID=GCA000153685_02533_gene;locus_tag=GCA000153685_02533;gene=sGA1
contig_1	Pyrodigal	CDS	2694360	2696402	.	+	0	ID=GCA000153685_02533;Name=Trehalase;locus_tag=GCA000153685_02533;product=Trehalase;Dbxref=GO:0004555,GO:0005886,GO:0005993,GO:0015927;gene=sGA1;Parent=GCA000153685_02533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3387,COG:G,RefSeq:WP_003917626.1,SO:0001217,UniParc:UPI0001FB6BA6,UniRef:UniRef100_A0A0H3LBN5,UniRef:UniRef50_A0R0W9,UniRef:UniRef90_P71741;ec_number=3.2.1.28
contig_1	Pyrodigal	gene	2696480	2697235	.	-	.	ID=GCA000153685_02534_gene;locus_tag=GCA000153685_02534
contig_1	Pyrodigal	CDS	2696480	2697235	.	-	0	ID=GCA000153685_02534;Name=PknH-like extracellular domain-containing protein;locus_tag=GCA000153685_02534;product=PknH-like extracellular domain-containing protein;Parent=GCA000153685_02534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412341.1,SO:0001217,UniParc:UPI00000D604E,UniRef:UniRef100_A5U597,UniRef:UniRef50_R4M938,UniRef:UniRef90_R4M938
contig_1	Pyrodigal	gene	2697232	2699193	.	-	.	ID=GCA000153685_02535_gene;locus_tag=GCA000153685_02535;gene=lepA
contig_1	Pyrodigal	CDS	2697232	2699193	.	-	0	ID=GCA000153685_02535;Name=translation elongation factor 4;locus_tag=GCA000153685_02535;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0009274,GO:0043022,GO:0045727,GO:1990606;gene=lepA;Parent=GCA000153685_02535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900516.1,SO:0001217,UniParc:UPI000012E47F,UniRef:UniRef100_P9WK97,UniRef:UniRef50_P60785,UniRef:UniRef90_P9WK97;ec_number=3.6.5.n1
contig_1	Pyrodigal	gene	2699238	2699783	.	+	.	ID=GCA000153685_02536_gene;locus_tag=GCA000153685_02536;gene=pemK
contig_1	Pyrodigal	CDS	2699238	2699783	.	+	0	ID=GCA000153685_02536;Name=Growth inhibitor PemK;locus_tag=GCA000153685_02536;product=Growth inhibitor PemK;gene=pemK;Parent=GCA000153685_02536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A5FA8E,UniRef:UniRef100_A0A9P1LGZ6,UniRef:UniRef50_A0A8J3YBU8,UniRef:UniRef90_A0A9P1LGZ6
contig_1	Pyrodigal	gene	2699954	2700382	.	-	.	ID=GCA000153685_02537_gene;locus_tag=GCA000153685_02537
contig_1	Pyrodigal	CDS	2699954	2700382	.	-	0	ID=GCA000153685_02537;Name=Histidine kinase;locus_tag=GCA000153685_02537;product=Histidine kinase;Parent=GCA000153685_02537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412347.1,SO:0001217,UniParc:UPI00000C1574,UniRef:UniRef100_P71737,UniRef:UniRef50_A0A1X0L536,UniRef:UniRef90_A0A1X0L536
contig_1	Pyrodigal	gene	2700642	2701484	.	+	.	ID=GCA000153685_02538_gene;locus_tag=GCA000153685_02538;gene=rnz
contig_1	Pyrodigal	CDS	2700642	2701484	.	+	0	ID=GCA000153685_02538;Name=Rv2407 family type 3 sulfatase;locus_tag=GCA000153685_02538;product=Rv2407 family type 3 sulfatase;Dbxref=GO:0042781,GO:0046872;gene=rnz;Parent=GCA000153685_02538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003911863,KEGG:K00784,RefSeq:WP_003412350.1,SO:0001217,UniParc:UPI00001A90F6,UniRef:UniRef100_Q7TYN1,UniRef:UniRef50_A0PTY0,UniRef:UniRef90_P9WGZ4;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	2702460	2703299	.	-	.	ID=GCA000153685_02539_gene;locus_tag=GCA000153685_02539
contig_1	Pyrodigal	CDS	2702460	2703299	.	-	0	ID=GCA000153685_02539;Name=Transglutaminase-like domain-containing protein;locus_tag=GCA000153685_02539;product=Transglutaminase-like domain-containing protein;Parent=GCA000153685_02539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412357.1,SO:0001217,UniParc:UPI00000D0F31,UniRef:UniRef100_P71734,UniRef:UniRef50_Q49757,UniRef:UniRef90_A0A1X2LWZ4
contig_1	Pyrodigal	gene	2703299	2704276	.	-	.	ID=GCA000153685_02540_gene;locus_tag=GCA000153685_02540
contig_1	Pyrodigal	CDS	2703299	2704276	.	-	0	ID=GCA000153685_02540;Name=DUF403 domain-containing protein;locus_tag=GCA000153685_02540;product=DUF403 domain-containing protein;Parent=GCA000153685_02540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412359.1,SO:0001217,UniParc:UPI00000D102B,UniRef:UniRef100_P71733,UniRef:UniRef50_A0A1A3Q5M8,UniRef:UniRef90_A0A1A2CRW8
contig_1	Pyrodigal	gene	2704276	2705931	.	-	.	ID=GCA000153685_02541_gene;locus_tag=GCA000153685_02541
contig_1	Pyrodigal	CDS	2704276	2705931	.	-	0	ID=GCA000153685_02541;Name=putative protein Mb2434c;locus_tag=GCA000153685_02541;product=putative protein Mb2434c;Parent=GCA000153685_02541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06048,RefSeq:WP_003412363.1,SO:0001217,UniParc:UPI000013BBFD,UniRef:UniRef100_P9WLA9,UniRef:UniRef50_Q49755,UniRef:UniRef90_P9WLA9;ec_number=6.3.2.2
contig_1	Pyrodigal	gene	2706041	2706301	.	+	.	ID=GCA000153685_02542_gene;locus_tag=GCA000153685_02542;gene=rpsT
contig_1	Pyrodigal	CDS	2706041	2706301	.	+	0	ID=GCA000153685_02542;Name=30S ribosomal protein S20;locus_tag=GCA000153685_02542;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000153685_02542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,RefSeq:WP_003899314.1,SO:0001217,UniParc:UPI0000134E4D,UniRef:UniRef100_P9WH41,UniRef:UniRef50_P9WH41,UniRef:UniRef90_P9WH41
contig_1	Pyrodigal	gene	2706317	2707285	.	-	.	ID=GCA000153685_02543_gene;locus_tag=GCA000153685_02543;gene=holA
contig_1	Pyrodigal	CDS	2706317	2707285	.	-	0	ID=GCA000153685_02543;Name=DNA polymerase III subunit delta;locus_tag=GCA000153685_02543;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0006261,GO:0009360;gene=holA;Parent=GCA000153685_02543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBD2,UniRef:UniRef100_P71730,UniRef:UniRef50_P71730,UniRef:UniRef90_P71730;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	2707298	2708842	.	-	.	ID=GCA000153685_02544_gene;locus_tag=GCA000153685_02544
contig_1	Pyrodigal	CDS	2707298	2708842	.	-	0	ID=GCA000153685_02544;Name=ComEC/Rec2-related protein domain-containing protein;locus_tag=GCA000153685_02544;product=ComEC/Rec2-related protein domain-containing protein;Parent=GCA000153685_02544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02238,RefSeq:WP_003412371.1,SO:0001217,UniParc:UPI00001652F0,UniRef:UniRef100_P71729,UniRef:UniRef50_A0A7I7YHF5,UniRef:UniRef90_P71729
contig_1	Pyrodigal	gene	2708857	2709750	.	-	.	ID=GCA000153685_02545_gene;locus_tag=GCA000153685_02545
contig_1	Pyrodigal	CDS	2708857	2709750	.	-	0	ID=GCA000153685_02545;Name=Helix-hairpin-helix DNA-binding motif class 1 domain-containing protein;locus_tag=GCA000153685_02545;product=Helix-hairpin-helix DNA-binding motif class 1 domain-containing protein;Parent=GCA000153685_02545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899316.1,SO:0001217,UniParc:UPI00000D5004,UniRef:UniRef100_P71728,UniRef:UniRef50_P71728,UniRef:UniRef90_P71728
contig_1	Pyrodigal	gene	2710090	2711292	.	-	.	ID=GCA000153685_02546_gene;locus_tag=GCA000153685_02546;gene=eis
contig_1	Pyrodigal	CDS	2710090	2711292	.	-	0	ID=GCA000153685_02546;Name=enhanced intracellular survival protein Eis;locus_tag=GCA000153685_02546;product=enhanced intracellular survival protein Eis;Dbxref=GO:0005829,GO:0008080,GO:0030649,GO:0033661,GO:0034054,GO:0034069,GO:0042802,GO:0043655,GO:0044161,GO:0046677,GO:0051701,GO:0052032,GO:0052040,GO:0052167,GO:0061733,GO:0097691;gene=eis;Parent=GCA000153685_02546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6BD,UniRef:UniRef100_A0A0H3LBM3,UniRef:UniRef50_P9WFK7,UniRef:UniRef90_P9WFK7;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2711438	2712280	.	-	.	ID=GCA000153685_02547_gene;locus_tag=GCA000153685_02547;gene=degV
contig_1	Pyrodigal	CDS	2711438	2712280	.	-	0	ID=GCA000153685_02547;Name=DegV domain-containing protein Mb2440c;locus_tag=GCA000153685_02547;product=DegV domain-containing protein Mb2440c;Dbxref=GO:0008289;gene=degV;Parent=GCA000153685_02547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412381.1,SO:0001217,UniParc:UPI000013BC08,UniRef:UniRef100_P9WP05,UniRef:UniRef50_P9WP05,UniRef:UniRef90_P9WP05
contig_1	Pyrodigal	gene	2712361	2713104	.	-	.	ID=GCA000153685_02548_gene;locus_tag=GCA000153685_02548;gene=octT
contig_1	Pyrodigal	CDS	2712361	2713104	.	-	0	ID=GCA000153685_02548;Name=diglucosylglycerate octanoyltransferase;locus_tag=GCA000153685_02548;product=diglucosylglycerate octanoyltransferase;Dbxref=GO:0005886,GO:0016414,GO:0051262;gene=octT;Parent=GCA000153685_02548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22797,RefSeq:WP_003412384.1,SO:0001217,UniParc:UPI00000D1112,UniRef:UniRef100_P71725,UniRef:UniRef50_K5BJH8,UniRef:UniRef90_P71725;ec_number=2.3.1.273
contig_1	Pyrodigal	gene	2713094	2713765	.	-	.	ID=GCA000153685_02549_gene;locus_tag=GCA000153685_02549;gene=gpgP
contig_1	Pyrodigal	CDS	2713094	2713765	.	-	0	ID=GCA000153685_02549;Name=glucosyl-3-phosphoglycerate phosphatase;locus_tag=GCA000153685_02549;product=glucosyl-3-phosphoglycerate phosphatase;Dbxref=GO:0005737,GO:0016311,GO:0016791,GO:0050531;gene=gpgP;Parent=GCA000153685_02549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412388,RefSeq:WP_003412388.1,SO:0001217,UniParc:UPI00000D5E49,UniRef:UniRef100_P9WIC7,UniRef:UniRef50_P9WIC7,UniRef:UniRef90_P9WIC7;ec_number=3.1.3.85
contig_1	Pyrodigal	gene	2713762	2714142	.	-	.	ID=GCA000153685_02550_gene;locus_tag=GCA000153685_02550;gene=rsfS
contig_1	Pyrodigal	CDS	2713762	2714142	.	-	0	ID=GCA000153685_02550;Name=ribosome silencing factor;locus_tag=GCA000153685_02550;product=ribosome silencing factor;Dbxref=GO:0017148,GO:0043022;gene=rsfS;Parent=GCA000153685_02550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412394.1,SO:0001217,UniParc:UPI00000D5FD3,UniRef:UniRef100_O86327,UniRef:UniRef50_O86327,UniRef:UniRef90_O86327
contig_1	Pyrodigal	gene	2714139	2714774	.	-	.	ID=GCA000153685_02551_gene;locus_tag=GCA000153685_02551;gene=nadD
contig_1	Pyrodigal	CDS	2714139	2714774	.	-	0	ID=GCA000153685_02551;Name=nicotinate-nucleotide adenylyltransferase;locus_tag=GCA000153685_02551;product=nicotinate-nucleotide adenylyltransferase;Dbxref=GO:0000309,GO:0004515,GO:0005524,GO:0009435,GO:0016779;gene=nadD;Parent=GCA000153685_02551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412398.1,SO:0001217,UniParc:UPI000012FCAE,UniRef:UniRef100_A0A654U6K5,UniRef:UniRef50_P9WJJ5,UniRef:UniRef90_P9WJJ5;ec_number=2.7.7.18
contig_1	Pyrodigal	gene	2715049	2715321	.	+	.	ID=GCA000153685_02552_gene;locus_tag=GCA000153685_02552;gene=vapC
contig_1	Pyrodigal	CDS	2715049	2715321	.	+	0	ID=GCA000153685_02552;Name=Type II toxin-antitoxin system VapC family toxin;locus_tag=GCA000153685_02552;product=Type II toxin-antitoxin system VapC family toxin;gene=vapC;Parent=GCA000153685_02552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412405.1,SO:0001217,UniParc:UPI00000D1089,UniRef:UniRef100_P71926,UniRef:UniRef50_P71926,UniRef:UniRef90_P71926
contig_1	Pyrodigal	gene	2715563	2716609	.	+	.	ID=GCA000153685_02553_gene;locus_tag=GCA000153685_02553
contig_1	Pyrodigal	CDS	2715563	2716609	.	+	0	ID=GCA000153685_02553;Name=Methyltransferase domain-containing protein;locus_tag=GCA000153685_02553;product=Methyltransferase domain-containing protein;Parent=GCA000153685_02553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412408.1,SO:0001217,UniParc:UPI00000D11C4,UniRef:UniRef100_P71925,UniRef:UniRef50_A0A0J6ZIT1,UniRef:UniRef90_P71925
contig_1	Pyrodigal	gene	2716742	2717743	.	-	.	ID=GCA000153685_02554_gene;locus_tag=GCA000153685_02554
contig_1	Pyrodigal	CDS	2716742	2717743	.	-	0	ID=GCA000153685_02554;Name=IS110 family transposase;locus_tag=GCA000153685_02554;product=IS110 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_02554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900518.1,SO:0001217,UniParc:UPI00000C1513,UniRef:UniRef100_A5U5B9,UniRef:UniRef50_A0A654ZRH7,UniRef:UniRef90_O53511
contig_1	Pyrodigal	gene	2717832	2719274	.	-	.	ID=GCA000153685_02555_gene;locus_tag=GCA000153685_02555;gene=coxE
contig_1	Pyrodigal	CDS	2717832	2719274	.	-	0	ID=GCA000153685_02555;Name=VWA domain-containing protein;locus_tag=GCA000153685_02555;product=VWA domain-containing protein;gene=coxE;Parent=GCA000153685_02555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3552,COG:S,RefSeq:WP_003412513.1,SO:0001217,UniParc:UPI00000D1130,UniRef:UniRef100_P71923,UniRef:UniRef50_A0A231HES3,UniRef:UniRef90_P71923
contig_1	Pyrodigal	gene	2719274	2720149	.	-	.	ID=GCA000153685_02556_gene;locus_tag=GCA000153685_02556;gene=mMP0363
contig_1	Pyrodigal	CDS	2719274	2720149	.	-	0	ID=GCA000153685_02556;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000153685_02556;product=AAA+ ATPase domain-containing protein;gene=mMP0363;Parent=GCA000153685_02556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_003412514.1,SO:0001217,UniParc:UPI00000D11E4,UniRef:UniRef100_P71922,UniRef:UniRef50_A0A918LNZ8,UniRef:UniRef90_P71922
contig_1	Pyrodigal	gene	2720196	2721443	.	-	.	ID=GCA000153685_02557_gene;locus_tag=GCA000153685_02557;gene=proA
contig_1	Pyrodigal	CDS	2720196	2721443	.	-	0	ID=GCA000153685_02557;Name=glutamate-5-semialdehyde dehydrogenase;locus_tag=GCA000153685_02557;product=glutamate-5-semialdehyde dehydrogenase;Dbxref=GO:0004350,GO:0005829,GO:0005886,GO:0006561,GO:0016620,GO:0050661,GO:0055129;gene=proA;Parent=GCA000153685_02557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00147,RefSeq:WP_003412516.1,SO:0001217,UniParc:UPI00001322B2,UniRef:UniRef100_P9WHV1,UniRef:UniRef50_B2HME9,UniRef:UniRef90_P9WHV1;ec_number=1.2.1.41
contig_1	Pyrodigal	gene	2721561	2721794	.	-	.	ID=GCA000153685_02558_gene;locus_tag=GCA000153685_02558
contig_1	Pyrodigal	CDS	2721561	2721794	.	-	0	ID=GCA000153685_02558;Name=Hydrogen peroxide-inducible genes activator;locus_tag=GCA000153685_02558;product=Hydrogen peroxide-inducible genes activator;Parent=GCA000153685_02558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A2D4,UniRef:UniRef100_A0A9P2H9M4,UniRef:UniRef50_R4M805,UniRef:UniRef90_A0A9P2H9M4
contig_1	Pyrodigal	gene	2721832	2722026	.	-	.	ID=GCA000153685_02559_gene;locus_tag=GCA000153685_02559
contig_1	Pyrodigal	CDS	2721832	2722026	.	-	0	ID=GCA000153685_02559;Name=hypothetical protein;locus_tag=GCA000153685_02559;product=hypothetical protein;Parent=GCA000153685_02559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412520.1,SO:0001217,UniParc:UPI00000D2CD7,UniRef:UniRef100_A0A1R3Y157,UniRef:UniRef50_A0A1R3Y157,UniRef:UniRef90_A0A1R3Y157
contig_1	Pyrodigal	gene	2722159	2722746	.	+	.	ID=GCA000153685_02560_gene;locus_tag=GCA000153685_02560;gene=ahpC
contig_1	Pyrodigal	CDS	2722159	2722746	.	+	0	ID=GCA000153685_02560;Name=peroxiredoxin AhpC;locus_tag=GCA000153685_02560;product=peroxiredoxin AhpC;Dbxref=GO:0004601,GO:0005829,GO:0005886,GO:0006979,GO:0008379,GO:0009274,GO:0016491,GO:0032843,GO:0042744,GO:0045454,GO:0051409,GO:0051920,GO:0102039;gene=ahpC;Parent=GCA000153685_02560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412529,KEGG:K24126,RefSeq:WP_003412529.1,SO:0001217,UniParc:UPI000002FC7F,UniRef:UniRef100_P9WQB7,UniRef:UniRef50_P9WQB7,UniRef:UniRef90_P9WQB7;ec_number=1.11.1.28
contig_1	Pyrodigal	gene	2722772	2723305	.	+	.	ID=GCA000153685_02561_gene;locus_tag=GCA000153685_02561;gene=ahpD
contig_1	Pyrodigal	CDS	2722772	2723305	.	+	0	ID=GCA000153685_02561;Name=Alkyl hydroperoxide reductase AhpD;locus_tag=GCA000153685_02561;product=Alkyl hydroperoxide reductase AhpD;Dbxref=GO:0005829,GO:0005886,GO:0006979,GO:0008785,GO:0015036,GO:0032843,GO:0045454,GO:0051920;gene=ahpD;Parent=GCA000153685_02561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04756,RefSeq:WP_003412536.1,SO:0001217,UniParc:UPI00001121E9,UniRef:UniRef100_P9WQB5,UniRef:UniRef50_P9WQB5,UniRef:UniRef90_P9WQB5;ec_number=1.11.1.28
contig_1	Pyrodigal	gene	2723302	2723886	.	-	.	ID=GCA000153685_02562_gene;locus_tag=GCA000153685_02562;gene=pPE41
contig_1	Pyrodigal	CDS	2723302	2723886	.	-	0	ID=GCA000153685_02562;Name=PPE family protein PPE41;locus_tag=GCA000153685_02562;product=PPE family protein PPE41;Dbxref=GO:0005576,GO:0009986,GO:0052572;gene=pPE41;Parent=GCA000153685_02562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412549.1,SO:0001217,UniParc:UPI00001652F1,UniRef:UniRef100_Q79FE1,UniRef:UniRef50_Q79FE1,UniRef:UniRef90_Q79FE1,VFDB:VFC0086,VFDB:VFG002393
contig_1	Pyrodigal	gene	2723933	2724232	.	-	.	ID=GCA000153685_02563_gene;locus_tag=GCA000153685_02563;gene=pE25
contig_1	Pyrodigal	CDS	2723933	2724232	.	-	0	ID=GCA000153685_02563;Name=PE-PGRS family protein PE25;locus_tag=GCA000153685_02563;product=PE-PGRS family protein PE25;Dbxref=GO:0005576,GO:0046982,GO:0070208;gene=pE25;Parent=GCA000153685_02563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412551.1,SO:0001217,UniParc:UPI00000D6009,UniRef:UniRef100_I6X486,UniRef:UniRef50_I6X486,UniRef:UniRef90_I6X486
contig_1	Pyrodigal	gene	2724810	2725100	.	-	.	ID=GCA000153685_02564_gene;locus_tag=GCA000153685_02564;gene=nrtS
contig_1	Pyrodigal	CDS	2724810	2725100	.	-	0	ID=GCA000153685_02564;Name=Nitrate/nitrite transporter NrtS;locus_tag=GCA000153685_02564;product=Nitrate/nitrite transporter NrtS;gene=nrtS;Parent=GCA000153685_02564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412553.1,SO:0001217,UniParc:UPI00000D1119,UniRef:UniRef100_P71916,UniRef:UniRef50_A0A8I0JXK5,UniRef:UniRef90_A0A8I0JXK5
contig_1	Pyrodigal	gene	2725081	2726526	.	-	.	ID=GCA000153685_02565_gene;locus_tag=GCA000153685_02565
contig_1	Pyrodigal	CDS	2725081	2726526	.	-	0	ID=GCA000153685_02565;Name=Conserved transmembrane protein;locus_tag=GCA000153685_02565;product=Conserved transmembrane protein;Parent=GCA000153685_02565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900521.1,SO:0001217,UniParc:UPI00000D5E1D,UniRef:UniRef100_A5U5D0,UniRef:UniRef50_A5U5D0,UniRef:UniRef90_A5U5D0
contig_1	Pyrodigal	gene	2726523	2728715	.	-	.	ID=GCA000153685_02566_gene;locus_tag=GCA000153685_02566
contig_1	Pyrodigal	CDS	2726523	2728715	.	-	0	ID=GCA000153685_02566;Name=Cyclase;locus_tag=GCA000153685_02566;product=Cyclase;Parent=GCA000153685_02566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412557.1,SO:0001217,UniParc:UPI00000D602C,UniRef:UniRef100_A5U5D1,UniRef:UniRef50_A0A1A2WRB2,UniRef:UniRef90_A0A0H3LIK2
contig_1	Pyrodigal	gene	2729196	2730110	.	+	.	ID=GCA000153685_02567_gene;locus_tag=GCA000153685_02567;gene=rbsK
contig_1	Pyrodigal	CDS	2729196	2730110	.	+	0	ID=GCA000153685_02567;Name=ribokinase RbsK;locus_tag=GCA000153685_02567;product=ribokinase RbsK;gene=rbsK;Parent=GCA000153685_02567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009936616,KEGG:K00852,RefSeq:WP_003412561.1,SO:0001217,UniParc:UPI00001650F8,UniRef:UniRef100_Q7D752,UniRef:UniRef50_A0A498Q8T5,UniRef:UniRef90_P71913;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	2730324	2730761	.	+	.	ID=GCA000153685_02568_gene;locus_tag=GCA000153685_02568
contig_1	Pyrodigal	CDS	2730324	2730761	.	+	0	ID=GCA000153685_02568;Name=Isoprenylcysteine carboxylmethyltransferase family protein;locus_tag=GCA000153685_02568;product=Isoprenylcysteine carboxylmethyltransferase family protein;Parent=GCA000153685_02568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBD9,UniRef:UniRef100_Q7D751,UniRef:UniRef50_Q7D751,UniRef:UniRef90_Q7D751
contig_1	Pyrodigal	gene	2730758	2732974	.	-	.	ID=GCA000153685_02569_gene;locus_tag=GCA000153685_02569;gene=nadE
contig_1	Pyrodigal	CDS	2730758	2732974	.	-	0	ID=GCA000153685_02569;Name=NAD(+) synthase;locus_tag=GCA000153685_02569;product=NAD(+) synthase;Dbxref=GO:0003952,GO:0004359,GO:0005524,GO:0005737,GO:0008152,GO:0008795,GO:0009435;gene=nadE;Parent=GCA000153685_02569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01950,SO:0001217,UniParc:UPI00001650F9,UniRef:UniRef100_P9WJJ3,UniRef:UniRef50_P9WJJ3,UniRef:UniRef90_P9WJJ3;ec_number=6.3.5.1
contig_1	Pyrodigal	gene	2733083	2734213	.	-	.	ID=GCA000153685_02570_gene;locus_tag=GCA000153685_02570;gene=proB
contig_1	Pyrodigal	CDS	2733083	2734213	.	-	0	ID=GCA000153685_02570;Name=Glutamate 5-kinase;locus_tag=GCA000153685_02570;product=Glutamate 5-kinase;Dbxref=GO:0003723,GO:0004349,GO:0005524,GO:0005829,GO:0006561,GO:0055129;gene=proB;Parent=GCA000153685_02570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412568.1,SO:0001217,UniParc:UPI00001650FA,UniRef:UniRef100_P59958,UniRef:UniRef50_P9WHU9,UniRef:UniRef90_P9WHU9;ec_number=2.7.2.11
contig_1	Pyrodigal	gene	2734213	2735667	.	-	.	ID=GCA000153685_02571_gene;locus_tag=GCA000153685_02571;gene=obgE
contig_1	Pyrodigal	CDS	2734213	2735667	.	-	0	ID=GCA000153685_02571;Name=GTPase ObgE;locus_tag=GCA000153685_02571;product=GTPase ObgE;Dbxref=GO:0000166,GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0005840,GO:0005886,GO:0042254;gene=obgE;Parent=GCA000153685_02571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D5012,UniRef:UniRef100_P9WMT0,UniRef:UniRef50_P9WMT1,UniRef:UniRef90_P9WMT1;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	2735738	2735998	.	-	.	ID=GCA000153685_02572_gene;locus_tag=GCA000153685_02572;gene=rpmA
contig_1	Pyrodigal	CDS	2735738	2735998	.	-	0	ID=GCA000153685_02572;Name=50S ribosomal protein L27;locus_tag=GCA000153685_02572;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000153685_02572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02899,RefSeq:WP_003412574.1,SO:0001217,UniParc:UPI0000133E0C,UniRef:UniRef100_P9WHB3,UniRef:UniRef50_P9WHB3,UniRef:UniRef90_P9WHB3
contig_1	Pyrodigal	gene	2736013	2736324	.	-	.	ID=GCA000153685_02573_gene;locus_tag=GCA000153685_02573;gene=rplU
contig_1	Pyrodigal	CDS	2736013	2736324	.	-	0	ID=GCA000153685_02573;Name=50S ribosomal protein L21;locus_tag=GCA000153685_02573;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA000153685_02573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,SO:0001217,UniParc:UPI0000E8AC42,UniRef:UniRef100_P9WHC3,UniRef:UniRef50_P9WHC3,UniRef:UniRef90_P9WHC3
contig_1	Pyrodigal	gene	2736675	2738150	.	+	.	ID=GCA000153685_02574_gene;locus_tag=GCA000153685_02574
contig_1	Pyrodigal	CDS	2736675	2738150	.	+	0	ID=GCA000153685_02574;Name=C4-dicarboxylate transport protein;locus_tag=GCA000153685_02574;product=C4-dicarboxylate transport protein;Parent=GCA000153685_02574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11103,RefSeq:WP_003900525.1,SO:0001217,UniParc:UPI0001278044,UniRef:UniRef100_UPI0001278044,UniRef:UniRef50_W5Y369,UniRef:UniRef90_A5U5D9
contig_1	Pyrodigal	gene	2738089	2740950	.	-	.	ID=GCA000153685_02575_gene;locus_tag=GCA000153685_02575;gene=rne
contig_1	Pyrodigal	CDS	2738089	2740950	.	-	0	ID=GCA000153685_02575;Name=Ribonuclease E;locus_tag=GCA000153685_02575;product=Ribonuclease E;Dbxref=GO:0004540,GO:0005737,GO:0005829,GO:0005886,GO:0006364,GO:0006397,GO:0008033,GO:0009274,GO:0019843,GO:0046872;gene=rne;Parent=GCA000153685_02575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08300,RefSeq:WP_003899322.1,SO:0001217,UniParc:UPI00000D5011,UniRef:UniRef100_P71905,UniRef:UniRef50_A0R152,UniRef:UniRef90_P71905;ec_number=3.1.26.12
contig_1	Pyrodigal	gene	2741280	2741702	.	-	.	ID=GCA000153685_02576_gene;locus_tag=GCA000153685_02576;gene=ndk
contig_1	Pyrodigal	CDS	2741280	2741702	.	-	0	ID=GCA000153685_02576;Name=nucleoside-diphosphate kinase;locus_tag=GCA000153685_02576;product=nucleoside-diphosphate kinase;Dbxref=GO:0004518,GO:0004550,GO:0004721,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006163,GO:0006183,GO:0006220,GO:0006228,GO:0006241,GO:0046872,GO:0052170;gene=ndk;Parent=GCA000153685_02576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6C4,UniRef:UniRef100_A0A0H3LFX5,UniRef:UniRef50_P9WJH7,UniRef:UniRef90_P9WJH7;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	2741733	2742104	.	-	.	ID=GCA000153685_02577_gene;locus_tag=GCA000153685_02577
contig_1	Pyrodigal	CDS	2741733	2742104	.	-	0	ID=GCA000153685_02577;Name=Conserved integral membrane protein;locus_tag=GCA000153685_02577;product=Conserved integral membrane protein;Parent=GCA000153685_02577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412596.1,SO:0001217,UniParc:UPI00000D1034,UniRef:UniRef100_A5U5E2,UniRef:UniRef50_A0A1A1VM37,UniRef:UniRef90_A5U5E2
contig_1	Pyrodigal	gene	2742101	2743564	.	-	.	ID=GCA000153685_02578_gene;locus_tag=GCA000153685_02578;gene=folC
contig_1	Pyrodigal	CDS	2742101	2743564	.	-	0	ID=GCA000153685_02578;Name=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;locus_tag=GCA000153685_02578;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;Dbxref=GO:0004326,GO:0005524,GO:0005737,GO:0008841,GO:0009396,GO:0046654,GO:0046656,GO:0046677,GO:0046872;gene=folC;Parent=GCA000153685_02578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000582053,BlastRules:WP_003899324,RefSeq:WP_003899324.1,SO:0001217,UniParc:UPI00000D1064,UniRef:UniRef100_I6Y0R5,UniRef:UniRef50_I6Y0R5,UniRef:UniRef90_I6Y0R5;ec_number=6.3.2.17
contig_1	Pyrodigal	gene	2743561	2746191	.	-	.	ID=GCA000153685_02579_gene;locus_tag=GCA000153685_02579;gene=valS
contig_1	Pyrodigal	CDS	2743561	2746191	.	-	0	ID=GCA000153685_02579;Name=valine--tRNA ligase;locus_tag=GCA000153685_02579;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004832,GO:0005524,GO:0005829,GO:0005886,GO:0006438,GO:0009274;gene=valS;Parent=GCA000153685_02579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01873,RefSeq:WP_003899325.1,SO:0001217,UniParc:UPI0000136700,UniRef:UniRef100_P9WFS9,UniRef:UniRef50_P9WFS9,UniRef:UniRef90_P9WFS9;ec_number=6.1.1.9
contig_1	Pyrodigal	gene	2746279	2747538	.	-	.	ID=GCA000153685_02580_gene;locus_tag=GCA000153685_02580
contig_1	Pyrodigal	CDS	2746279	2747538	.	-	0	ID=GCA000153685_02580;Name=Putative trans-acting enoyl reductase MT2525;locus_tag=GCA000153685_02580;product=Putative trans-acting enoyl reductase MT2525;Dbxref=GO:0005886,GO:0009247,GO:0016491;Parent=GCA000153685_02580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412609.1,SO:0001217,UniParc:UPI00001652F4,UniRef:UniRef100_O53176,UniRef:UniRef50_P9WGV5,UniRef:UniRef90_O53176;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	2747628	2748194	.	-	.	ID=GCA000153685_02581_gene;locus_tag=GCA000153685_02581;gene=rpfE
contig_1	Pyrodigal	CDS	2747628	2748194	.	-	0	ID=GCA000153685_02581;Name=resuscitation-promoting factor protein RpfE;locus_tag=GCA000153685_02581;product=resuscitation-promoting factor protein RpfE;Dbxref=GO:0005576,GO:0009372,GO:0010628,GO:0010629,GO:0016787,GO:0042127;gene=rpfE;Parent=GCA000153685_02581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886146,SO:0001217,UniParc:UPI00000D2CDC,UniRef:UniRef100_Q8VJI4,UniRef:UniRef50_O53177,UniRef:UniRef90_O53177;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2748984	2749520	.	-	.	ID=GCA000153685_02582_gene;locus_tag=GCA000153685_02582;gene=mobA
contig_1	Pyrodigal	CDS	2748984	2749520	.	-	0	ID=GCA000153685_02582;Name=molybdenum cofactor guanylyltransferase;locus_tag=GCA000153685_02582;product=molybdenum cofactor guanylyltransferase;Dbxref=GO:0005525,GO:0005737,GO:0006777,GO:0046872,GO:0061603;gene=mobA;Parent=GCA000153685_02582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6C6,UniRef:UniRef100_P9WJQ9,UniRef:UniRef50_P9WJQ9,UniRef:UniRef90_P9WJQ9;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	2749591	2750712	.	-	.	ID=GCA000153685_02583_gene;locus_tag=GCA000153685_02583;gene=korB
contig_1	Pyrodigal	CDS	2749591	2750712	.	-	0	ID=GCA000153685_02583;Name=2-oxoglutarate oxidoreductase subunit KorB;locus_tag=GCA000153685_02583;product=2-oxoglutarate oxidoreductase subunit KorB;Dbxref=GO:0000287,GO:0005829,GO:0006099,GO:0009274,GO:0030976,GO:0047553;gene=korB;Parent=GCA000153685_02583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412624.1,SO:0001217,UniParc:UPI00000D3ADD,UniRef:UniRef100_O53181,UniRef:UniRef50_O53181,UniRef:UniRef90_O53181;ec_number=1.2.7.3
contig_1	Pyrodigal	gene	2750709	2752670	.	-	.	ID=GCA000153685_02584_gene;locus_tag=GCA000153685_02584;gene=korA
contig_1	Pyrodigal	CDS	2750709	2752670	.	-	0	ID=GCA000153685_02584;Name=2-oxoglutarate oxidoreductase subunit KorA;locus_tag=GCA000153685_02584;product=2-oxoglutarate oxidoreductase subunit KorA;Dbxref=GO:0000287,GO:0005886,GO:0006099,GO:0006979,GO:0009274,GO:0047553;gene=korA;Parent=GCA000153685_02584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1014,KEGG:K00174,RefSeq:WP_003412627.1,SO:0001217,UniParc:UPI00001652F5,UniRef:UniRef100_O53182,UniRef:UniRef50_O53182,UniRef:UniRef90_O53182;ec_number=1.2.7.3
contig_1	Pyrodigal	gene	2752902	2754158	.	-	.	ID=GCA000153685_02585_gene;locus_tag=GCA000153685_02585
contig_1	Pyrodigal	CDS	2752902	2754158	.	-	0	ID=GCA000153685_02585;Name=putative MFS-type transporter MT2531;locus_tag=GCA000153685_02585;product=putative MFS-type transporter MT2531;Dbxref=GO:0005886,GO:0022857;Parent=GCA000153685_02585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412631.1,SO:0001217,UniParc:UPI00000D5F8E,UniRef:UniRef100_P9WJX1,UniRef:UniRef50_P9WJX1,UniRef:UniRef90_P9WJX1
contig_1	Pyrodigal	gene	2754174	2755454	.	-	.	ID=GCA000153685_02586_gene;locus_tag=GCA000153685_02586;gene=clpX
contig_1	Pyrodigal	CDS	2754174	2755454	.	-	0	ID=GCA000153685_02586;Name=ATP-dependent Clp protease ATP-binding subunit ClpX;locus_tag=GCA000153685_02586;product=ATP-dependent Clp protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000153685_02586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_003412634.1,SO:0001217,UniParc:UPI0000127B78,UniRef:UniRef100_P9WPB9,UniRef:UniRef50_P9WPB9,UniRef:UniRef90_P9WPB9
contig_1	Pyrodigal	gene	2755745	2756653	.	+	.	ID=GCA000153685_02587_gene;locus_tag=GCA000153685_02587;gene=mmuM
contig_1	Pyrodigal	CDS	2755745	2756653	.	+	0	ID=GCA000153685_02587;Name=homocysteine S-methyltransferase;locus_tag=GCA000153685_02587;product=homocysteine S-methyltransferase;Dbxref=GO:0009086,GO:0047150;gene=mmuM;Parent=GCA000153685_02587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00547,RefSeq:WP_003899329.1,SO:0001217,UniParc:UPI00001650FD,UniRef:UniRef100_A0A0H3LBT7,UniRef:UniRef50_A0A5C4LYM5,UniRef:UniRef90_A0A0H3LBT7;ec_number=2.1.1.10
contig_1	Pyrodigal	gene	2756730	2758346	.	+	.	ID=GCA000153685_02588_gene;locus_tag=GCA000153685_02588;gene=jefA
contig_1	Pyrodigal	CDS	2756730	2758346	.	+	0	ID=GCA000153685_02588;Name=multidrug efflux pump JefA;locus_tag=GCA000153685_02588;product=multidrug efflux pump JefA;Dbxref=GO:0005886,GO:0016020,GO:0022857,GO:0046677;gene=jefA;Parent=GCA000153685_02588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412642,SO:0001217,UniParc:UPI00019011A3,UniRef:UniRef100_P9WJW9,UniRef:UniRef50_P9WJW9,UniRef:UniRef90_P9WJW9
contig_1	Pyrodigal	gene	2758497	2759141	.	-	.	ID=GCA000153685_02589_gene;locus_tag=GCA000153685_02589;gene=clpP2
contig_1	Pyrodigal	CDS	2758497	2759141	.	-	0	ID=GCA000153685_02589;Name=ATP-dependent CLP protease proteolytic subunit ClpP2;locus_tag=GCA000153685_02589;product=ATP-dependent CLP protease proteolytic subunit ClpP2;Dbxref=GO:0004176,GO:0004252,GO:0005829,GO:0005886,GO:0006515,GO:0009274,GO:0009368,GO:0051117;gene=clpP2;Parent=GCA000153685_02589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412648,COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_003412648.1,SO:0001217,UniParc:UPI0000127AF7,UniRef:UniRef100_P9WPC3,UniRef:UniRef50_P9WPC3,UniRef:UniRef90_P9WPC3;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	2759138	2759740	.	-	.	ID=GCA000153685_02590_gene;locus_tag=GCA000153685_02590;gene=clpP1
contig_1	Pyrodigal	CDS	2759138	2759740	.	-	0	ID=GCA000153685_02590;Name=ATP-dependent CLP protease proteolytic subunit ClpP1;locus_tag=GCA000153685_02590;product=ATP-dependent CLP protease proteolytic subunit ClpP1;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006515,GO:0009368,GO:0051117;gene=clpP1;Parent=GCA000153685_02590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412650,COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_003412650.1,SO:0001217,UniParc:UPI0000127AE5,UniRef:UniRef100_P9WPC5,UniRef:UniRef50_P9WPC5,UniRef:UniRef90_P9WPC5;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	2759857	2761257	.	-	.	ID=GCA000153685_02591_gene;locus_tag=GCA000153685_02591;gene=tig
contig_1	Pyrodigal	CDS	2759857	2761257	.	-	0	ID=GCA000153685_02591;Name=trigger factor;locus_tag=GCA000153685_02591;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000153685_02591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899331.1,SO:0001217,UniParc:UPI000003326E,UniRef:UniRef100_P9WG55,UniRef:UniRef50_P9WG55,UniRef:UniRef90_P9WG55;ec_number=5.2.1.8
contig_1	tRNAscan-SE	gene	2761294	2761370	.	-	.	ID=GCA000153685_02592_gene;locus_tag=GCA000153685_02592;gene=trnP
contig_1	tRNAscan-SE	tRNA	2761294	2761370	.	-	.	ID=GCA000153685_02592;Name=tRNA-Pro(tgg);locus_tag=GCA000153685_02592;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000153685_02592_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	2761507	2761577	.	+	.	ID=GCA000153685_02593_gene;locus_tag=GCA000153685_02593;gene=trnG
contig_1	tRNAscan-SE	tRNA	2761507	2761577	.	+	.	ID=GCA000153685_02593;Name=tRNA-Gly(tcc);locus_tag=GCA000153685_02593;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000153685_02593_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	Pyrodigal	gene	2761621	2762805	.	+	.	ID=GCA000153685_02594_gene;locus_tag=GCA000153685_02594;gene=lipP
contig_1	Pyrodigal	CDS	2761621	2762805	.	+	0	ID=GCA000153685_02594;Name=Esterase LipP;locus_tag=GCA000153685_02594;product=Esterase LipP;gene=lipP;Parent=GCA000153685_02594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412656.1,SO:0001217,UniParc:UPI00000D5F02,UniRef:UniRef100_A5U5F9,UniRef:UniRef50_A0A0N9YIH1,UniRef:UniRef90_A5U5F9
contig_1	Pyrodigal	gene	2762825	2763631	.	-	.	ID=GCA000153685_02595_gene;locus_tag=GCA000153685_02595;gene=nei1
contig_1	Pyrodigal	CDS	2762825	2763631	.	-	0	ID=GCA000153685_02595;Name=Endonuclease 8 1;locus_tag=GCA000153685_02595;product=Endonuclease 8 1;Dbxref=GO:0000703,GO:0003684,GO:0003690,GO:0003697,GO:0003906,GO:0004844,GO:0006281,GO:0006284,GO:0006289,GO:0006979,GO:0008270,GO:0008534,GO:0034599,GO:0140078;gene=nei1;Parent=GCA000153685_02595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412657.1,SO:0001217,UniParc:UPI000013BC2F,UniRef:UniRef100_P9WNB9,UniRef:UniRef50_P9WNB9,UniRef:UniRef90_P9WNB9
contig_1	Pyrodigal	gene	2763637	2764125	.	-	.	ID=GCA000153685_02596_gene;locus_tag=GCA000153685_02596;gene=rpiB
contig_1	Pyrodigal	CDS	2763637	2764125	.	-	0	ID=GCA000153685_02596;Name=ribose-5-phosphate isomerase;locus_tag=GCA000153685_02596;product=ribose-5-phosphate isomerase;Dbxref=GO:0004751,GO:0005576,GO:0005975,GO:0009052,GO:0016853,GO:0019316;gene=rpiB;Parent=GCA000153685_02596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899332.1,SO:0001217,UniParc:UPI00000D4F80,UniRef:UniRef100_P9WKD7,UniRef:UniRef50_P9WKD7,UniRef:UniRef90_P9WKD7;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	2764227	2764850	.	-	.	ID=GCA000153685_02597_gene;locus_tag=GCA000153685_02597
contig_1	Pyrodigal	CDS	2764227	2764850	.	-	0	ID=GCA000153685_02597;Name=Rv2466c family mycothiol-dependent reductase;locus_tag=GCA000153685_02597;product=Rv2466c family mycothiol-dependent reductase;Dbxref=GO:0005737,GO:0009274,GO:0016491;Parent=GCA000153685_02597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412664,RefSeq:WP_003412664.1,SO:0001217,UniParc:UPI00000C1530,UniRef:UniRef100_O53193,UniRef:UniRef50_O53193,UniRef:UniRef90_O53193
contig_1	Pyrodigal	gene	2764952	2767537	.	+	.	ID=GCA000153685_02598_gene;locus_tag=GCA000153685_02598;gene=pepN
contig_1	Pyrodigal	CDS	2764952	2767537	.	+	0	ID=GCA000153685_02598;Name=aminopeptidase N;locus_tag=GCA000153685_02598;product=aminopeptidase N;Dbxref=GO:0004177,GO:0006508,GO:0008237,GO:0008270;gene=pepN;Parent=GCA000153685_02598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036395.1,SO:0001217,UniParc:UPI0003AB4A7D,UniRef:UniRef100_UPI0003AB4A7D,UniRef:UniRef50_B2HNH4,UniRef:UniRef90_L7N655;ec_number=3.4.11.2
contig_1	Pyrodigal	gene	2767610	2768077	.	-	.	ID=GCA000153685_02599_gene;locus_tag=GCA000153685_02599
contig_1	Pyrodigal	CDS	2767610	2768077	.	-	0	ID=GCA000153685_02599;Name=putative protein Rv2468c;locus_tag=GCA000153685_02599;product=putative protein Rv2468c;Dbxref=GO:0005886;Parent=GCA000153685_02599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904843.1,SO:0001217,UniParc:UPI00005EE6C9,UniRef:UniRef100_A0A0H3LBR8,UniRef:UniRef50_P9WLA7,UniRef:UniRef90_P9WLA7
contig_1	Pyrodigal	gene	2768064	2768297	.	-	.	ID=GCA000153685_02600_gene;locus_tag=GCA000153685_02600
contig_1	Pyrodigal	CDS	2768064	2768297	.	-	0	ID=GCA000153685_02600;Name=Conserved protein;locus_tag=GCA000153685_02600;product=Conserved protein;Parent=GCA000153685_02600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412671.1,SO:0001217,UniParc:UPI00005EE6CA,UniRef:UniRef100_I6YDH3,UniRef:UniRef50_A0A1A2T2H9,UniRef:UniRef90_I6YDH3
contig_1	Pyrodigal	gene	2768333	2769001	.	-	.	ID=GCA000153685_02601_gene;locus_tag=GCA000153685_02601
contig_1	Pyrodigal	CDS	2768333	2769001	.	-	0	ID=GCA000153685_02601;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_02601;product=HNH nuclease domain-containing protein;Parent=GCA000153685_02601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899334.1,SO:0001217,UniParc:UPI00000D6036,UniRef:UniRef100_O53196,UniRef:UniRef50_U5EIJ4,UniRef:UniRef90_O53196
contig_1	Pyrodigal	gene	2769144	2769530	.	+	.	ID=GCA000153685_02602_gene;locus_tag=GCA000153685_02602;gene=glbO
contig_1	Pyrodigal	CDS	2769144	2769530	.	+	0	ID=GCA000153685_02602;Name=group 2 truncated hemoglobin GlbO;locus_tag=GCA000153685_02602;product=group 2 truncated hemoglobin GlbO;Dbxref=GO:0005344,GO:0005886,GO:0015671,GO:0019825,GO:0020037,GO:0046872;gene=glbO;Parent=GCA000153685_02602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412688,BlastRules:WP_010908224,RefSeq:WP_003412688.1,SO:0001217,UniParc:UPI000012B53A,UniRef:UniRef100_P9WN23,UniRef:UniRef50_P9WN23,UniRef:UniRef90_P9WN23
contig_1	Pyrodigal	gene	2769608	2771170	.	+	.	ID=GCA000153685_02603_gene;locus_tag=GCA000153685_02603;gene=aglA
contig_1	Pyrodigal	CDS	2769608	2771170	.	+	0	ID=GCA000153685_02603;Name=Alpha-glucosidase AglA;locus_tag=GCA000153685_02603;product=Alpha-glucosidase AglA;gene=aglA;Parent=GCA000153685_02603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6CC,UniRef:UniRef100_A5U5G7,UniRef:UniRef50_A0A143QS98,UniRef:UniRef90_A5U5G7
contig_1	Pyrodigal	gene	2771786	2772250	.	+	.	ID=GCA000153685_02604_gene;locus_tag=GCA000153685_02604
contig_1	Pyrodigal	CDS	2771786	2772250	.	+	0	ID=GCA000153685_02604;Name=Alanine and proline rich membrane protein;locus_tag=GCA000153685_02604;product=Alanine and proline rich membrane protein;Parent=GCA000153685_02604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B44C19,UniRef:UniRef100_A0A0H3LBT4,UniRef:UniRef50_A0A3S4DUY6,UniRef:UniRef90_A0A0H3LBT4
contig_1	Pyrodigal	gene	2772282	2772956	.	-	.	ID=GCA000153685_02605_gene;locus_tag=GCA000153685_02605;gene=espG
contig_1	Pyrodigal	CDS	2772282	2772956	.	-	0	ID=GCA000153685_02605;Name=ESX secretion-associated protein EspG;locus_tag=GCA000153685_02605;product=ESX secretion-associated protein EspG;gene=espG;Parent=GCA000153685_02605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E624D9,UniRef:UniRef100_A0A0E8NI76,UniRef:UniRef50_A0A2G5PBM0,UniRef:UniRef90_A0A916LE50
contig_1	Pyrodigal	gene	2772941	2773357	.	-	.	ID=GCA000153685_02606_gene;locus_tag=GCA000153685_02606
contig_1	Pyrodigal	CDS	2772941	2773357	.	-	0	ID=GCA000153685_02606;Name=Thioesterase;locus_tag=GCA000153685_02606;product=Thioesterase;Parent=GCA000153685_02606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412703.1,SO:0001217,UniParc:UPI00000D0FF2,UniRef:UniRef100_I6Y9E8,UniRef:UniRef50_A0R1C1,UniRef:UniRef90_R4M4H7
contig_1	Pyrodigal	gene	2773354	2778228	.	-	.	ID=GCA000153685_02607_gene;locus_tag=GCA000153685_02607;gene=gdh
contig_1	Pyrodigal	CDS	2773354	2778228	.	-	0	ID=GCA000153685_02607;Name=NAD-specific glutamate dehydrogenase;locus_tag=GCA000153685_02607;product=NAD-specific glutamate dehydrogenase;Dbxref=GO:0004069,GO:0004352,GO:0005829,GO:0005886,GO:0006538,GO:0009274;gene=gdh;Parent=GCA000153685_02607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15371,RefSeq:WP_003900528.1,SO:0001217,UniParc:UPI00012780A7,UniRef:UniRef100_UPI00012780A7,UniRef:UniRef50_O53203,UniRef:UniRef90_O53203;ec_number=1.4.1.2
contig_1	Pyrodigal	gene	2778332	2780008	.	-	.	ID=GCA000153685_02608_gene;locus_tag=GCA000153685_02608;gene=ettA
contig_1	Pyrodigal	CDS	2778332	2780008	.	-	0	ID=GCA000153685_02608;Name=energy-dependent translational throttle protein EttA;locus_tag=GCA000153685_02608;product=energy-dependent translational throttle protein EttA;Dbxref=GO:0000049,GO:0003689,GO:0005524,GO:0005829,GO:0005886,GO:0006412,GO:0009274,GO:0016887,GO:0019843,GO:0043022,GO:0045900,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ettA;Parent=GCA000153685_02608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_003412708.1,SO:0001217,UniParc:UPI00000D5E48,UniRef:UniRef100_P9WQK3,UniRef:UniRef50_P9WQK3,UniRef:UniRef90_P9WQK3;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	2780089	2780595	.	-	.	ID=GCA000153685_02609_gene;locus_tag=GCA000153685_02609
contig_1	Pyrodigal	CDS	2780089	2780595	.	-	0	ID=GCA000153685_02609;Name=Single-stranded DNA-binding protein;locus_tag=GCA000153685_02609;product=Single-stranded DNA-binding protein;Parent=GCA000153685_02609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900529.1,SO:0001217,UniParc:UPI00000D2CE1,UniRef:UniRef100_A0A0H3LBV5,UniRef:UniRef50_A0A3E2N3B7,UniRef:UniRef90_O53205
contig_1	Pyrodigal	gene	2781520	2783889	.	-	.	ID=GCA000153685_02610_gene;locus_tag=GCA000153685_02610;gene=plsB
contig_1	Pyrodigal	CDS	2781520	2783889	.	-	0	ID=GCA000153685_02610;Name=glycerol-3-phosphate 1-O-acyltransferase;locus_tag=GCA000153685_02610;product=glycerol-3-phosphate 1-O-acyltransferase;Dbxref=GO:0003824,GO:0004366,GO:0005886,GO:0008654,GO:0016024;gene=plsB;Parent=GCA000153685_02610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00631,RefSeq:WP_003900530.1,SO:0001217,UniParc:UPI00012780A8,UniRef:UniRef100_A0A0H3LBV7,UniRef:UniRef50_P9WI61,UniRef:UniRef90_P9WI61;ec_number=2.3.1.15
contig_1	Pyrodigal	gene	2783886	2785628	.	-	.	ID=GCA000153685_02611_gene;locus_tag=GCA000153685_02611;gene=plsC
contig_1	Pyrodigal	CDS	2783886	2785628	.	-	0	ID=GCA000153685_02611;Name=Phospholipid biosynthesis protein PlsC;locus_tag=GCA000153685_02611;product=Phospholipid biosynthesis protein PlsC;gene=plsC;Parent=GCA000153685_02611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15781,RefSeq:WP_003899343.1,SO:0001217,UniParc:UPI00000D5FDA,UniRef:UniRef100_I6YDI9,UniRef:UniRef50_A0A5C7WXN3,UniRef:UniRef90_A0A655A564;ec_number=3.1.3.3
contig_1	Pyrodigal	gene	2785625	2787100	.	-	.	ID=GCA000153685_02612_gene;locus_tag=GCA000153685_02612
contig_1	Pyrodigal	CDS	2785625	2787100	.	-	0	ID=GCA000153685_02612;Name=Putative diacyglycerol O-acyltransferase Rv2484c;locus_tag=GCA000153685_02612;product=Putative diacyglycerol O-acyltransferase Rv2484c;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0051701,GO:0071731;Parent=GCA000153685_02612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899345.1,SO:0001217,UniParc:UPI000013BC45,UniRef:UniRef100_P9WKB3,UniRef:UniRef50_P9WKB3,UniRef:UniRef90_P9WKB3;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	2787329	2788594	.	-	.	ID=GCA000153685_02613_gene;locus_tag=GCA000153685_02613;gene=lipQ
contig_1	Pyrodigal	CDS	2787329	2788594	.	-	0	ID=GCA000153685_02613;Name=Esterase LipQ;locus_tag=GCA000153685_02613;product=Esterase LipQ;Dbxref=GO:0016787;gene=lipQ;Parent=GCA000153685_02613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412725.1,SO:0001217,UniParc:UPI00000D5EA7,UniRef:UniRef100_I6Y9F7,UniRef:UniRef50_I6Y9F7,UniRef:UniRef90_I6Y9F7;ec_number=3.1.1.-
contig_1	tRNAscan-SE	gene	2788782	2788855	.	+	.	ID=GCA000153685_02614_gene;locus_tag=GCA000153685_02614;gene=trnR
contig_1	tRNAscan-SE	tRNA	2788782	2788855	.	+	.	ID=GCA000153685_02614;Name=tRNA-Arg(tct);locus_tag=GCA000153685_02614;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000153685_02614_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	2788956	2789726	.	+	.	ID=GCA000153685_02615_gene;locus_tag=GCA000153685_02615;gene=echA14
contig_1	Pyrodigal	CDS	2788956	2789726	.	+	0	ID=GCA000153685_02615;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_02615;product=enoyl-CoA hydratase;Dbxref=GO:0004300,GO:0006635;gene=echA14;Parent=GCA000153685_02615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412728.1,SO:0001217,UniParc:UPI0000129B73,UniRef:UniRef100_P9WNN5,UniRef:UniRef50_P9WNN5,UniRef:UniRef90_P9WNN5;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	2789907	2791991	.	-	.	ID=GCA000153685_02616_gene;locus_tag=GCA000153685_02616
contig_1	Pyrodigal	CDS	2789907	2791991	.	-	0	ID=GCA000153685_02616;Name=PE-PGRS family protein PE_PGRS42;locus_tag=GCA000153685_02616;product=PE-PGRS family protein PE_PGRS42;Parent=GCA000153685_02616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003910913.1,SO:0001217,UniParc:UPI00000D5F34,UniRef:UniRef100_I6XEF1,UniRef:UniRef50_I6XEF1,UniRef:UniRef90_I6XEF1
contig_1	Pyrodigal	gene	2792073	2795414	.	-	.	ID=GCA000153685_02617_gene;locus_tag=GCA000153685_02617;gene=luxR
contig_1	Pyrodigal	CDS	2792073	2795414	.	-	0	ID=GCA000153685_02617;Name=LuxR family transcriptional regulator;locus_tag=GCA000153685_02617;product=LuxR family transcriptional regulator;gene=luxR;Parent=GCA000153685_02617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902279.1,SO:0001217,UniParc:UPI0000165105,UniRef:UniRef100_A5U5I4,UniRef:UniRef50_A0A0D1LC26,UniRef:UniRef90_A0A655J4Z5
contig_1	Pyrodigal	gene	2795860	2800842	.	-	.	ID=GCA000153685_02618_gene;locus_tag=GCA000153685_02618
contig_1	Pyrodigal	CDS	2795860	2800842	.	-	0	ID=GCA000153685_02618;Name=PE family protein;locus_tag=GCA000153685_02618;product=PE family protein;Parent=GCA000153685_02618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886147.1,SO:0001217,UniParc:UPI00001652F8,UniRef:UniRef100_Q79FD4,UniRef:UniRef50_A0A9P2H9H8,UniRef:UniRef90_A0A9P2H9H8
contig_1	Pyrodigal	gene	2800929	2801120	.	-	.	ID=GCA000153685_02619_gene;locus_tag=GCA000153685_02619
contig_1	Pyrodigal	CDS	2800929	2801120	.	-	0	ID=GCA000153685_02619;Name=hypothetical protein;locus_tag=GCA000153685_02619;product=hypothetical protein;Parent=GCA000153685_02619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6DA,UniRef:UniRef100_A5U5I7,UniRef:UniRef50_A5U5I7,UniRef:UniRef90_A5U5I7
contig_1	Pyrodigal	gene	2801271	2801894	.	+	.	ID=GCA000153685_02620_gene;locus_tag=GCA000153685_02620
contig_1	Pyrodigal	CDS	2801271	2801894	.	+	0	ID=GCA000153685_02620;Name=TIGR00725 family protein;locus_tag=GCA000153685_02620;product=TIGR00725 family protein;Parent=GCA000153685_02620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900858.1,SO:0001217,UniParc:UPI00000D111A,UniRef:UniRef100_I6XEF6,UniRef:UniRef50_I6XEF6,UniRef:UniRef90_I6XEF6
contig_1	Pyrodigal	gene	2801884	2802636	.	+	.	ID=GCA000153685_02621_gene;locus_tag=GCA000153685_02621
contig_1	Pyrodigal	CDS	2801884	2802636	.	+	0	ID=GCA000153685_02621;Name=Thymidylate synthase;locus_tag=GCA000153685_02621;product=Thymidylate synthase;Parent=GCA000153685_02621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900859.1,SO:0001217,UniParc:UPI00000502E8,UniRef:UniRef100_I6YDJ7,UniRef:UniRef50_A0A5E4JL89,UniRef:UniRef90_I6YDJ7
contig_1	Pyrodigal	gene	2802916	2803341	.	+	.	ID=GCA000153685_02622_gene;locus_tag=GCA000153685_02622;gene=vapC38
contig_1	Pyrodigal	CDS	2802916	2803341	.	+	0	ID=GCA000153685_02622;Name=Ribonuclease VapC38;locus_tag=GCA000153685_02622;product=Ribonuclease VapC38;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0045926;gene=vapC38;Parent=GCA000153685_02622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900860.1,SO:0001217,UniParc:UPI0000165106,UniRef:UniRef100_A0A0H3LG22,UniRef:UniRef50_O53219,UniRef:UniRef90_O53219;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2803364	2804545	.	-	.	ID=GCA000153685_02623_gene;locus_tag=GCA000153685_02623;gene=bkdC
contig_1	Pyrodigal	CDS	2803364	2804545	.	-	0	ID=GCA000153685_02623;Name=Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex;locus_tag=GCA000153685_02623;product=Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex;Dbxref=GO:0005737,GO:0005886,GO:0009274,GO:0016407,GO:0031405,GO:0043754;gene=bkdC;Parent=GCA000153685_02623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899351.1,SO:0001217,UniParc:UPI00005EE6DC,UniRef:UniRef100_A5U5J2,UniRef:UniRef50_O06159,UniRef:UniRef90_O06159;ec_number=2.3.1.168
contig_1	Pyrodigal	gene	2804542	2805588	.	-	.	ID=GCA000153685_02624_gene;locus_tag=GCA000153685_02624;gene=bkdB
contig_1	Pyrodigal	CDS	2804542	2805588	.	-	0	ID=GCA000153685_02624;Name=3-methyl-2-oxobutanoate dehydrogenase subunit beta;locus_tag=GCA000153685_02624;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;Dbxref=GO:0000287,GO:0003863,GO:0005886,GO:0007584,GO:0009083,GO:0009274;gene=bkdB;Parent=GCA000153685_02624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412757,KEGG:K00167,RefSeq:WP_003412757.1,SO:0001217,UniParc:UPI00000D1056,UniRef:UniRef100_P9WIS1,UniRef:UniRef50_P9WIS1,UniRef:UniRef90_P9WIS1;ec_number=1.2.4.4
contig_1	Pyrodigal	gene	2805599	2806672	.	-	.	ID=GCA000153685_02625_gene;locus_tag=GCA000153685_02625;gene=pdhA
contig_1	Pyrodigal	CDS	2805599	2806672	.	-	0	ID=GCA000153685_02625;Name=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;locus_tag=GCA000153685_02625;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;Dbxref=GO:0000287,GO:0003863,GO:0004739,GO:0006086,GO:0045254;gene=pdhA;Parent=GCA000153685_02625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911907.1,SO:0001217,UniParc:UPI00005EE6DE,UniRef:UniRef100_P9WIS3,UniRef:UniRef50_P9WIS3,UniRef:UniRef90_P9WIS3;ec_number=1.2.4.4
contig_1	Pyrodigal	gene	2806961	2807782	.	-	.	ID=GCA000153685_02626_gene;locus_tag=GCA000153685_02626;gene=citE
contig_1	Pyrodigal	CDS	2806961	2807782	.	-	0	ID=GCA000153685_02626;Name=citrate (pro-3S)-lyase subunit beta;locus_tag=GCA000153685_02626;product=citrate (pro-3S)-lyase subunit beta;Dbxref=GO:0000287,GO:0006107,GO:0016829;gene=citE;Parent=GCA000153685_02626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412766,RefSeq:WP_003412766.1,SO:0001217,UniParc:UPI00000D101B,UniRef:UniRef100_P9WPE1,UniRef:UniRef50_P9WPE1,UniRef:UniRef90_P9WPE1;ec_number=4.1.-.-
contig_1	Pyrodigal	gene	2807779	2808336	.	-	.	ID=GCA000153685_02627_gene;locus_tag=GCA000153685_02627
contig_1	Pyrodigal	CDS	2807779	2808336	.	-	0	ID=GCA000153685_02627;Name=putative oxidase regulatory-related protein;locus_tag=GCA000153685_02627;product=putative oxidase regulatory-related protein;Parent=GCA000153685_02627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412768.1,SO:0001217,UniParc:UPI00000D10D4,UniRef:UniRef100_I6Y9H2,UniRef:UniRef50_F5XMV1,UniRef:UniRef90_I6Y9H2
contig_1	Pyrodigal	gene	2808333	2809517	.	-	.	ID=GCA000153685_02628_gene;locus_tag=GCA000153685_02628;gene=caiA
contig_1	Pyrodigal	CDS	2808333	2809517	.	-	0	ID=GCA000153685_02628;Name=putative acyl-CoA dehydrogenase FadE19 (MMGC);locus_tag=GCA000153685_02628;product=putative acyl-CoA dehydrogenase FadE19 (MMGC);gene=caiA;Parent=GCA000153685_02628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_003412771.1,SO:0001217,UniParc:UPI00000D11B2,UniRef:UniRef100_I6Y0W5,UniRef:UniRef50_I6Y0W5,UniRef:UniRef90_I6Y0W5
contig_1	Pyrodigal	gene	2809522	2811486	.	-	.	ID=GCA000153685_02629_gene;locus_tag=GCA000153685_02629;gene=accA1
contig_1	Pyrodigal	CDS	2809522	2811486	.	-	0	ID=GCA000153685_02629;Name=Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase alpha1 subunit;locus_tag=GCA000153685_02629;product=Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase alpha1 subunit;Dbxref=GO:0004075,GO:0005524,GO:0005886,GO:0006552,GO:0046872;gene=accA1;Parent=GCA000153685_02629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01968,RefSeq:WP_003899356.1,SO:0001217,UniParc:UPI00001267DC,UniRef:UniRef100_P9WPQ3,UniRef:UniRef50_P9WPQ3,UniRef:UniRef90_P9WPQ3;ec_number=6.4.1.4
contig_1	Pyrodigal	gene	2811491	2813080	.	-	.	ID=GCA000153685_02630_gene;locus_tag=GCA000153685_02630;gene=accD1
contig_1	Pyrodigal	CDS	2811491	2813080	.	-	0	ID=GCA000153685_02630;Name=Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit;locus_tag=GCA000153685_02630;product=Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit;Dbxref=GO:0006552,GO:0016740,GO:0016874,GO:1905202;gene=accD1;Parent=GCA000153685_02630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4799,COG:I,KEGG:K01969,RefSeq:WP_003412778.1,SO:0001217,UniParc:UPI00000D5E17,UniRef:UniRef100_I6YDK7,UniRef:UniRef50_I6YDK7,UniRef:UniRef90_I6YDK7;ec_number=6.4.1.4
contig_1	Pyrodigal	gene	2813077	2813733	.	-	.	ID=GCA000153685_02631_gene;locus_tag=GCA000153685_02631;gene=scoB
contig_1	Pyrodigal	CDS	2813077	2813733	.	-	0	ID=GCA000153685_02631;Name=putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B;locus_tag=GCA000153685_02631;product=putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B;Dbxref=GO:0001666,GO:0008260,GO:0008410;gene=scoB;Parent=GCA000153685_02631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900861.1,SO:0001217,UniParc:UPI0001278143,UniRef:UniRef100_A0A0H3LBX7,UniRef:UniRef50_P9WPW3,UniRef:UniRef90_P9WPW3;ec_number=2.8.3.5
contig_1	Pyrodigal	gene	2813730	2814476	.	-	.	ID=GCA000153685_02632_gene;locus_tag=GCA000153685_02632;gene=scoA
contig_1	Pyrodigal	CDS	2813730	2814476	.	-	0	ID=GCA000153685_02632;Name=putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A;locus_tag=GCA000153685_02632;product=putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A;Dbxref=GO:0008260,GO:0008410;gene=scoA;Parent=GCA000153685_02632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412786.1,SO:0001217,UniParc:UPI0000135671,UniRef:UniRef100_P9WPW5,UniRef:UniRef50_P9WPW5,UniRef:UniRef90_P9WPW5;ec_number=2.8.3.5
contig_1	Pyrodigal	gene	2814559	2816202	.	-	.	ID=GCA000153685_02633_gene;locus_tag=GCA000153685_02633
contig_1	Pyrodigal	CDS	2814559	2816202	.	-	0	ID=GCA000153685_02633;Name=putative fatty-acid-CoA ligase fadD35;locus_tag=GCA000153685_02633;product=putative fatty-acid-CoA ligase fadD35;Parent=GCA000153685_02633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899357.1,SO:0001217,UniParc:UPI00000D5F49,UniRef:UniRef100_A5U5K2,UniRef:UniRef50_D4YN27,UniRef:UniRef90_A0A0H3M6J5
contig_1	Pyrodigal	gene	2816318	2816965	.	+	.	ID=GCA000153685_02634_gene;locus_tag=GCA000153685_02634;gene=tetR
contig_1	Pyrodigal	CDS	2816318	2816965	.	+	0	ID=GCA000153685_02634;Name=TetR family transcriptional regulator;locus_tag=GCA000153685_02634;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000153685_02634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412790.1,SO:0001217,UniParc:UPI00001652F9,UniRef:UniRef100_A5U5K3,UniRef:UniRef50_J5EBG4,UniRef:UniRef90_A0A654TF27
contig_1	Pyrodigal	gene	2817044	2817865	.	+	.	ID=GCA000153685_02635_gene;locus_tag=GCA000153685_02635
contig_1	Pyrodigal	CDS	2817044	2817865	.	+	0	ID=GCA000153685_02635;Name=putative conserved proline rich membrane protein;locus_tag=GCA000153685_02635;product=putative conserved proline rich membrane protein;Parent=GCA000153685_02635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412795.1,SO:0001217,UniParc:UPI00001652FA,UniRef:UniRef100_O06170,UniRef:UniRef50_Q73XJ3,UniRef:UniRef90_O06170
contig_1	Pyrodigal	gene	2817862	2819199	.	-	.	ID=GCA000153685_02636_gene;locus_tag=GCA000153685_02636
contig_1	Pyrodigal	CDS	2817862	2819199	.	-	0	ID=GCA000153685_02636;Name=Integral membrane leucine and alanine rich protein;locus_tag=GCA000153685_02636;product=Integral membrane leucine and alanine rich protein;Parent=GCA000153685_02636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06902,RefSeq:WP_003412798.1,SO:0001217,UniParc:UPI00001652FB,UniRef:UniRef100_Q7D706,UniRef:UniRef50_A0A178LYF0,UniRef:UniRef90_Q7D706
contig_1	Pyrodigal	gene	2819284	2820090	.	+	.	ID=GCA000153685_02637_gene;locus_tag=GCA000153685_02637;gene=cmrA
contig_1	Pyrodigal	CDS	2819284	2820090	.	+	0	ID=GCA000153685_02637;Name=mycolate reductase CmrA;locus_tag=GCA000153685_02637;product=mycolate reductase CmrA;Dbxref=GO:0071768;gene=cmrA;Parent=GCA000153685_02637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412799,BlastRules:WP_011015148,BlastRules:WP_011730038,COG:COG0300,COG:R,KEGG:K27306,RefSeq:WP_003412799.1,SO:0001217,UniParc:UPI00000D5E68,UniRef:UniRef100_A5U5K6,UniRef:UniRef50_A0A1X1TKZ5,UniRef:UniRef90_A0A1B4Y6C4;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2820094	2821695	.	-	.	ID=GCA000153685_02638_gene;locus_tag=GCA000153685_02638
contig_1	Pyrodigal	CDS	2820094	2821695	.	-	0	ID=GCA000153685_02638;Name=Helicase HerA-like C-terminal domain-containing protein;locus_tag=GCA000153685_02638;product=Helicase HerA-like C-terminal domain-containing protein;Parent=GCA000153685_02638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412803.1,SO:0001217,UniParc:UPI00000D114E,UniRef:UniRef100_I6Y0X6,UniRef:UniRef50_S3X996,UniRef:UniRef90_A0A0H3LD20
contig_1	Pyrodigal	gene	2821712	2822410	.	+	.	ID=GCA000153685_02639_gene;locus_tag=GCA000153685_02639;gene=orn
contig_1	Pyrodigal	CDS	2821712	2822410	.	+	0	ID=GCA000153685_02639;Name=oligoribonuclease;locus_tag=GCA000153685_02639;product=oligoribonuclease;Dbxref=GO:0000175,GO:0003676,GO:0005737,GO:0006259;gene=orn;Parent=GCA000153685_02639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13288,SO:0001217,UniParc:UPI0000529587,UniRef:UniRef100_A0A0E8WJI8,UniRef:UniRef50_P9WIU1,UniRef:UniRef90_P9WIU1;ec_number=3.1.15.-
contig_1	tRNAscan-SE	gene	2822460	2822535	.	+	.	ID=GCA000153685_02640_gene;locus_tag=GCA000153685_02640;gene=trnH
contig_1	tRNAscan-SE	tRNA	2822460	2822535	.	+	.	ID=GCA000153685_02640;Name=tRNA-His(gtg);locus_tag=GCA000153685_02640;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000153685_02640_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	Pyrodigal	gene	2823162	2824409	.	-	.	ID=GCA000153685_02641_gene;locus_tag=GCA000153685_02641;gene=tnp
contig_1	Pyrodigal	CDS	2823162	2824409	.	-	0	ID=GCA000153685_02641;Name=IS256 family IS1081 transposase;locus_tag=GCA000153685_02641;product=IS256 family IS1081 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000153685_02641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1081,RefSeq:WP_003900260.1,SO:0001217,UniParc:UPI00000D2D3E,UniRef:UniRef100_Q8VIQ5,UniRef:UniRef50_P60230,UniRef:UniRef90_P60230
contig_1	Pyrodigal	gene	2824560	2824745	.	+	.	ID=GCA000153685_02642_gene;locus_tag=GCA000153685_02642
contig_1	Pyrodigal	CDS	2824560	2824745	.	+	0	ID=GCA000153685_02642;Name=hypothetical protein;locus_tag=GCA000153685_02642;product=hypothetical protein;Parent=GCA000153685_02642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412914.1,SO:0001217,UniParc:UPI00000D2CE8,UniRef:UniRef100_A5U5L0,UniRef:UniRef50_A5U5L0,UniRef:UniRef90_A5U5L0
contig_1	Pyrodigal	gene	2824767	2825189	.	+	.	ID=GCA000153685_02643_gene;locus_tag=GCA000153685_02643
contig_1	Pyrodigal	CDS	2824767	2825189	.	+	0	ID=GCA000153685_02643;Name=DUF35 domain-containing protein;locus_tag=GCA000153685_02643;product=DUF35 domain-containing protein;Parent=GCA000153685_02643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412921.1,SO:0001217,UniParc:UPI00001A9115,UniRef:UniRef100_A0A1R3Y1T5,UniRef:UniRef50_A0A2I7W9R7,UniRef:UniRef90_A0A2I7W9R7
contig_1	Pyrodigal	gene	2825483	2825944	.	-	.	ID=GCA000153685_02644_gene;locus_tag=GCA000153685_02644
contig_1	Pyrodigal	CDS	2825483	2825944	.	-	0	ID=GCA000153685_02644;Name=DUF4411 domain-containing protein;locus_tag=GCA000153685_02644;product=DUF4411 domain-containing protein;Parent=GCA000153685_02644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899362.1,SO:0001217,UniParc:UPI00000D0F87,UniRef:UniRef100_I6Y0Y0,UniRef:UniRef50_I6Y0Y0,UniRef:UniRef90_I6Y0Y0
contig_1	Pyrodigal	gene	2825950	2827179	.	-	.	ID=GCA000153685_02645_gene;locus_tag=GCA000153685_02645
contig_1	Pyrodigal	CDS	2825950	2827179	.	-	0	ID=GCA000153685_02645;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000153685_02645;product=HTH cro/C1-type domain-containing protein;Parent=GCA000153685_02645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6E4,UniRef:UniRef100_I6XEH5,UniRef:UniRef50_I6XEH5,UniRef:UniRef90_I6XEH5
contig_1	Pyrodigal	gene	2827316	2828119	.	-	.	ID=GCA000153685_02646_gene;locus_tag=GCA000153685_02646
contig_1	Pyrodigal	CDS	2827316	2828119	.	-	0	ID=GCA000153685_02646;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000153685_02646;product=Helix-turn-helix domain-containing protein;Parent=GCA000153685_02646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412932.1,SO:0001217,UniParc:UPI00000D2CEA,UniRef:UniRef100_I6YDM0,UniRef:UniRef50_I6YDM0,UniRef:UniRef90_I6YDM0
contig_1	Pyrodigal	gene	2828116	2828367	.	-	.	ID=GCA000153685_02647_gene;locus_tag=GCA000153685_02647
contig_1	Pyrodigal	CDS	2828116	2828367	.	-	0	ID=GCA000153685_02647;Name=HicA-like toxin;locus_tag=GCA000153685_02647;product=HicA-like toxin;Parent=GCA000153685_02647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412936.1,SO:0001217,UniParc:UPI00001652FC,UniRef:UniRef100_O53222,UniRef:UniRef50_A0A138A8C8,UniRef:UniRef90_O53222
contig_1	Pyrodigal	gene	2828715	2829941	.	-	.	ID=GCA000153685_02648_gene;locus_tag=GCA000153685_02648;gene=ldtMt2
contig_1	Pyrodigal	CDS	2828715	2829941	.	-	0	ID=GCA000153685_02648;Name=L%2CD-transpeptidase LdtMt2;locus_tag=GCA000153685_02648;product=L%2CD-transpeptidase LdtMt2;Dbxref=GO:0005886,GO:0008360,GO:0016746,GO:0018104,GO:0046872,GO:0071555,GO:0071972;gene=ldtMt2;Parent=GCA000153685_02648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003412938,RefSeq:WP_003412938.1,SO:0001217,UniParc:UPI00000D109C,UniRef:UniRef100_I6Y9J2,UniRef:UniRef50_I6Y9J2,UniRef:UniRef90_I6Y9J2;ec_number=2.3.2.-
contig_1	tRNAscan-SE	gene	2830100	2830172	.	+	.	ID=GCA000153685_02649_gene;locus_tag=GCA000153685_02649;gene=trnK
contig_1	tRNAscan-SE	tRNA	2830100	2830172	.	+	.	ID=GCA000153685_02649;Name=tRNA-Lys(ctt);locus_tag=GCA000153685_02649;product=tRNA-Lys(ctt);gene=trnK;anti_codon=ctt;amino_acid=Lys;Parent=GCA000153685_02649_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	Pyrodigal	gene	2830391	2831869	.	+	.	ID=GCA000153685_02650_gene;locus_tag=GCA000153685_02650
contig_1	Pyrodigal	CDS	2830391	2831869	.	+	0	ID=GCA000153685_02650;Name=PE family protein PE26;locus_tag=GCA000153685_02650;product=PE family protein PE26;Parent=GCA000153685_02650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900842.1,SO:0001217,UniParc:UPI00001652FD,UniRef:UniRef100_Q79FD3,UniRef:UniRef50_R4LXE7,UniRef:UniRef90_Q79FD3
contig_1	Pyrodigal	gene	2831994	2832221	.	-	.	ID=GCA000153685_02651_gene;locus_tag=GCA000153685_02651
contig_1	Pyrodigal	CDS	2831994	2832221	.	-	0	ID=GCA000153685_02651;Name=putative conserved membrane protein;locus_tag=GCA000153685_02651;product=putative conserved membrane protein;Parent=GCA000153685_02651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412942.1,SO:0001217,UniParc:UPI00000D1133,UniRef:UniRef100_I6XEI0,UniRef:UniRef50_I4BLX8,UniRef:UniRef90_I6XEI0
contig_1	Pyrodigal	gene	2832290	2832763	.	+	.	ID=GCA000153685_02652_gene;locus_tag=GCA000153685_02652;gene=bcp
contig_1	Pyrodigal	CDS	2832290	2832763	.	+	0	ID=GCA000153685_02652;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000153685_02652;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0005737,GO:0005829,GO:0005886,GO:0008379,GO:0016209,GO:0016491,GO:0034599,GO:0045454;gene=bcp;Parent=GCA000153685_02652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03564,RefSeq:WP_003412944.1,SO:0001217,UniParc:UPI00000D0F67,UniRef:UniRef100_P9WIE1,UniRef:UniRef50_P9WIE1,UniRef:UniRef90_P9WIE1;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	2832735	2834147	.	-	.	ID=GCA000153685_02653_gene;locus_tag=GCA000153685_02653
contig_1	Pyrodigal	CDS	2832735	2834147	.	-	0	ID=GCA000153685_02653;Name=Peptidase M20 dimerisation domain-containing protein;locus_tag=GCA000153685_02653;product=Peptidase M20 dimerisation domain-containing protein;Parent=GCA000153685_02653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412946.1,SO:0001217,UniParc:UPI00000D600A,UniRef:UniRef100_I6X4J0,UniRef:UniRef50_A0A0D1K173,UniRef:UniRef90_I6X4J0
contig_1	Pyrodigal	gene	2834144	2834536	.	-	.	ID=GCA000153685_02654_gene;locus_tag=GCA000153685_02654;gene=acpS
contig_1	Pyrodigal	CDS	2834144	2834536	.	-	0	ID=GCA000153685_02654;Name=holo-ACP synthase;locus_tag=GCA000153685_02654;product=holo-ACP synthase;Dbxref=GO:0000287,GO:0005737,GO:0006633,GO:0008897;gene=acpS;Parent=GCA000153685_02654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0736,COG:I,RefSeq:WP_003412952.1,SO:0001217,UniParc:UPI000012533D,UniRef:UniRef100_P9WQD3,UniRef:UniRef50_P9WQD3,UniRef:UniRef90_P9WQD3;ec_number=2.7.8.7
contig_1	Pyrodigal	gene	2834729	2843938	.	-	.	ID=GCA000153685_02655_gene;locus_tag=GCA000153685_02655;gene=fas
contig_1	Pyrodigal	CDS	2834729	2843938	.	-	0	ID=GCA000153685_02655;Name=fatty acid synthase;locus_tag=GCA000153685_02655;product=fatty acid synthase;gene=fas;Parent=GCA000153685_02655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900843,KEGG:K11533,RefSeq:WP_003900843.1,SO:0001217,UniParc:UPI00000CCBDF,UniRef:UniRef100_A5U5M2,UniRef:UniRef50_A0A5S9R6T8,UniRef:UniRef90_A5U5M2;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2844458	2845180	.	-	.	ID=GCA000153685_02656_gene;locus_tag=GCA000153685_02656
contig_1	Pyrodigal	CDS	2844458	2845180	.	-	0	ID=GCA000153685_02656;Name=Putative peptidoglycan hydrolase Rv2525c;locus_tag=GCA000153685_02656;product=Putative peptidoglycan hydrolase Rv2525c;Dbxref=GO:0003796,GO:0005576,GO:0016998,GO:0071555;Parent=GCA000153685_02656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412957.1,SO:0001217,UniParc:UPI00000D1103,UniRef:UniRef100_I6XEI5,UniRef:UniRef50_I6XEI5,UniRef:UniRef90_I6XEI5;ec_number=3.2.1.17
contig_1	Pyrodigal	gene	2845697	2845924	.	+	.	ID=GCA000153685_02657_gene;locus_tag=GCA000153685_02657;gene=vapB17
contig_1	Pyrodigal	CDS	2845697	2845924	.	+	0	ID=GCA000153685_02657;Name=Putative antitoxin VapB17;locus_tag=GCA000153685_02657;product=Putative antitoxin VapB17;gene=vapB17;Parent=GCA000153685_02657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412960.1,SO:0001217,UniParc:UPI00000D105F,UniRef:UniRef100_P9WJ49,UniRef:UniRef50_P9WJ49,UniRef:UniRef90_P9WJ49
contig_1	Pyrodigal	gene	2845921	2846322	.	+	.	ID=GCA000153685_02658_gene;locus_tag=GCA000153685_02658;gene=vapC17
contig_1	Pyrodigal	CDS	2845921	2846322	.	+	0	ID=GCA000153685_02658;Name=Ribonuclease VapC17;locus_tag=GCA000153685_02658;product=Ribonuclease VapC17;Dbxref=GO:0000287,GO:0004540;gene=vapC17;Parent=GCA000153685_02658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412963.1,SO:0001217,UniParc:UPI00000D0FAF,UniRef:UniRef100_P9WF95,UniRef:UniRef50_P9WF95,UniRef:UniRef90_P9WF95;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2846357	2847277	.	-	.	ID=GCA000153685_02659_gene;locus_tag=GCA000153685_02659
contig_1	Pyrodigal	CDS	2846357	2847277	.	-	0	ID=GCA000153685_02659;Name=Restriction system protein Mrr;locus_tag=GCA000153685_02659;product=Restriction system protein Mrr;Parent=GCA000153685_02659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07448,RefSeq:WP_003412965.1,SO:0001217,UniParc:UPI00000D5E25,UniRef:UniRef100_A5U5M6,UniRef:UniRef50_C7NM11,UniRef:UniRef90_A5U5M6
contig_1	Pyrodigal	gene	2847922	2848872	.	+	.	ID=GCA000153685_02660_gene;locus_tag=GCA000153685_02660
contig_1	Pyrodigal	CDS	2847922	2848872	.	+	0	ID=GCA000153685_02660;Name=ERCC4 domain-containing protein;locus_tag=GCA000153685_02660;product=ERCC4 domain-containing protein;Parent=GCA000153685_02660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911916.1,SO:0001217,UniParc:UPI00005EE6E8,UniRef:UniRef100_A0A0H3LC18,UniRef:UniRef50_A0A329MBJ2,UniRef:UniRef90_A0A0H3LC18
contig_1	Pyrodigal	gene	2848873	2849292	.	-	.	ID=GCA000153685_02661_gene;locus_tag=GCA000153685_02661;gene=vapC39
contig_1	Pyrodigal	CDS	2848873	2849292	.	-	0	ID=GCA000153685_02661;Name=Ribonuclease VapC39;locus_tag=GCA000153685_02661;product=Ribonuclease VapC39;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0045926;gene=vapC39;Parent=GCA000153685_02661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412970.1,SO:0001217,UniParc:UPI00000D0FD8,UniRef:UniRef100_P9WF63,UniRef:UniRef50_P9WF63,UniRef:UniRef90_P9WF63;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2849544	2852387	.	-	.	ID=GCA000153685_02662_gene;locus_tag=GCA000153685_02662
contig_1	Pyrodigal	CDS	2849544	2852387	.	-	0	ID=GCA000153685_02662;Name=Amino acid decarboxylase;locus_tag=GCA000153685_02662;product=Amino acid decarboxylase;Parent=GCA000153685_02662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899363.1,SO:0001217,UniParc:UPI00000D5FCA,UniRef:UniRef100_A5U5N0,UniRef:UniRef50_A0A3S4FMA7,UniRef:UniRef90_A0A0U0S8H0
contig_1	Pyrodigal	gene	2852459	2852860	.	-	.	ID=GCA000153685_02663_gene;locus_tag=GCA000153685_02663;gene=nusB
contig_1	Pyrodigal	CDS	2852459	2852860	.	-	0	ID=GCA000153685_02663;Name=Antitermination protein NusB;locus_tag=GCA000153685_02663;product=Antitermination protein NusB;gene=nusB;Parent=GCA000153685_02663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412981.1,SO:0001217,UniParc:UPI00000C14B4,UniRef:UniRef100_P95021,UniRef:UniRef50_P95021,UniRef:UniRef90_P95021
contig_1	Pyrodigal	gene	2852860	2853330	.	-	.	ID=GCA000153685_02664_gene;locus_tag=GCA000153685_02664;gene=nusB
contig_1	Pyrodigal	CDS	2852860	2853330	.	-	0	ID=GCA000153685_02664;Name=transcription antitermination factor NusB;locus_tag=GCA000153685_02664;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000153685_02664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03625,RefSeq:WP_003899364.1,SO:0001217,UniParc:UPI0000111474,UniRef:UniRef100_P9WIV1,UniRef:UniRef50_P9WIV1,UniRef:UniRef90_P9WIV1
contig_1	Pyrodigal	gene	2853333	2853896	.	-	.	ID=GCA000153685_02665_gene;locus_tag=GCA000153685_02665;gene=efp
contig_1	Pyrodigal	CDS	2853333	2853896	.	-	0	ID=GCA000153685_02665;Name=elongation factor P;locus_tag=GCA000153685_02665;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA000153685_02665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_003412989.1,SO:0001217,UniParc:UPI0000129D0F,UniRef:UniRef100_P9WNM3,UniRef:UniRef50_A0QWR4,UniRef:UniRef90_P9WNM3
contig_1	Pyrodigal	gene	2853906	2855024	.	-	.	ID=GCA000153685_02666_gene;locus_tag=GCA000153685_02666
contig_1	Pyrodigal	CDS	2853906	2855024	.	-	0	ID=GCA000153685_02666;Name=Cytoplasmic peptidase PEPQ;locus_tag=GCA000153685_02666;product=Cytoplasmic peptidase PEPQ;Parent=GCA000153685_02666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412996.1,SO:0001217,UniParc:UPI00000D5EF8,UniRef:UniRef100_A5U5N4,UniRef:UniRef50_A0A378T8F8,UniRef:UniRef90_A0A654ZTY1
contig_1	Pyrodigal	gene	2855058	2855750	.	+	.	ID=GCA000153685_02667_gene;locus_tag=GCA000153685_02667
contig_1	Pyrodigal	CDS	2855058	2855750	.	+	0	ID=GCA000153685_02667;Name=Transmembrane protein;locus_tag=GCA000153685_02667;product=Transmembrane protein;Parent=GCA000153685_02667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003412998.1,SO:0001217,UniParc:UPI00001652FE,UniRef:UniRef100_Q7D6Y5,UniRef:UniRef50_Q741J5,UniRef:UniRef90_Q7D6Y5
contig_1	Pyrodigal	gene	2855754	2856197	.	-	.	ID=GCA000153685_02668_gene;locus_tag=GCA000153685_02668;gene=aroQ
contig_1	Pyrodigal	CDS	2855754	2856197	.	-	0	ID=GCA000153685_02668;Name=type II 3-dehydroquinate dehydratase;locus_tag=GCA000153685_02668;product=type II 3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019631;gene=aroQ;Parent=GCA000153685_02668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03786,RefSeq:WP_003413001.1,SO:0001217,UniParc:UPI000016510D,UniRef:UniRef100_P9WPX7,UniRef:UniRef50_P9WPX7,UniRef:UniRef90_P9WPX7;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	2856194	2857282	.	-	.	ID=GCA000153685_02669_gene;locus_tag=GCA000153685_02669;gene=aroB
contig_1	Pyrodigal	CDS	2856194	2857282	.	-	0	ID=GCA000153685_02669;Name=3-dehydroquinate synthase;locus_tag=GCA000153685_02669;product=3-dehydroquinate synthase;Dbxref=GO:0000166,GO:0003856,GO:0005507,GO:0005737,GO:0005829,GO:0005886,GO:0008270,GO:0008652,GO:0009073,GO:0009274,GO:0009423;gene=aroB;Parent=GCA000153685_02669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_003413008.1,SO:0001217,UniParc:UPI0000125F74,UniRef:UniRef100_P9WPX9,UniRef:UniRef50_P9WPX9,UniRef:UniRef90_P9WPX9;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	2857279	2857809	.	-	.	ID=GCA000153685_02670_gene;locus_tag=GCA000153685_02670;gene=aroK
contig_1	Pyrodigal	CDS	2857279	2857809	.	-	0	ID=GCA000153685_02670;Name=shikimate kinase AroK;locus_tag=GCA000153685_02670;product=shikimate kinase AroK;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632;gene=aroK;Parent=GCA000153685_02670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000836640,BlastRules:WP_003413021,RefSeq:WP_003413021.1,SO:0001217,UniParc:UPI0000112323,UniRef:UniRef100_P9WPY3,UniRef:UniRef50_P9WPY3,UniRef:UniRef90_P9WPY3;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	2857813	2859018	.	-	.	ID=GCA000153685_02671_gene;locus_tag=GCA000153685_02671;gene=aroC
contig_1	Pyrodigal	CDS	2857813	2859018	.	-	0	ID=GCA000153685_02671;Name=chorismate synthase;locus_tag=GCA000153685_02671;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181,GO:0016651,GO:0051287;gene=aroC;Parent=GCA000153685_02671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_003413027.1,SO:0001217,UniParc:UPI0000125FA5,UniRef:UniRef100_P9WPY1,UniRef:UniRef50_P9WPY1,UniRef:UniRef90_P9WPY1;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	2859126	2859440	.	+	.	ID=GCA000153685_02672_gene;locus_tag=GCA000153685_02672
contig_1	Pyrodigal	CDS	2859126	2859440	.	+	0	ID=GCA000153685_02672;Name=ESX-1 secretion-associated protein;locus_tag=GCA000153685_02672;product=ESX-1 secretion-associated protein;Parent=GCA000153685_02672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009937839.1,SO:0001217,UniParc:UPI00005EE6EC,UniRef:UniRef100_A0A0H3LD69,UniRef:UniRef50_A0A0H3LD69,UniRef:UniRef90_A0A0H3LD69
contig_1	Pyrodigal	gene	2859736	2860947	.	+	.	ID=GCA000153685_02673_gene;locus_tag=GCA000153685_02673
contig_1	Pyrodigal	CDS	2859736	2860947	.	+	0	ID=GCA000153685_02673;Name=DUF1023 domain-containing protein;locus_tag=GCA000153685_02673;product=DUF1023 domain-containing protein;Parent=GCA000153685_02673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900845.1,SO:0001217,UniParc:UPI00001A911C,UniRef:UniRef100_A0A1R3Y1X4,UniRef:UniRef50_P95011,UniRef:UniRef90_P95011
contig_1	Bakta	gene	2861003	2861077	.	+	.	ID=GCA000153685_02674_gene;locus_tag=GCA000153685_02674;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2861003	2861077	.	+	0	ID=GCA000153685_02674;Name=DUF1023 domain-containing protein;locus_tag=GCA000153685_02674;product=DUF1023 domain-containing protein;Parent=GCA000153685_02674_gene;Note=SO:0001217,UniParc:UPI0002C69AB0,UniRef:UniRef100_A0A7I7MP18,UniRef:UniRef50_A0A7I7MP18,UniRef:UniRef90_A0A7I7MP18
contig_1	Pyrodigal	gene	2861176	2861733	.	+	.	ID=GCA000153685_02675_gene;locus_tag=GCA000153685_02675;gene=lppA
contig_1	Pyrodigal	CDS	2861176	2861733	.	+	0	ID=GCA000153685_02675;Name=Putative lipoprotein LppA;locus_tag=GCA000153685_02675;product=Putative lipoprotein LppA;Dbxref=GO:0005886;gene=lppA;Parent=GCA000153685_02675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031D4662,UniRef:UniRef100_P9WK81,UniRef:UniRef50_P9WK79,UniRef:UniRef90_P9WK81
contig_1	Pyrodigal	gene	2861832	2862389	.	+	.	ID=GCA000153685_02676_gene;locus_tag=GCA000153685_02676;gene=lppA
contig_1	Pyrodigal	CDS	2861832	2862389	.	+	0	ID=GCA000153685_02676;Name=Lipoprotein LppA;locus_tag=GCA000153685_02676;product=Lipoprotein LppA;gene=lppA;Parent=GCA000153685_02676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002EC70F6,UniRef:UniRef100_Q8VJG1,UniRef:UniRef50_P9WK79,UniRef:UniRef90_A0A7I7MR18
contig_1	Pyrodigal	gene	2862488	2863048	.	+	.	ID=GCA000153685_02677_gene;locus_tag=GCA000153685_02677;gene=lppB
contig_1	Pyrodigal	CDS	2862488	2863048	.	+	0	ID=GCA000153685_02677;Name=Putative lipoprotein LppB;locus_tag=GCA000153685_02677;product=Putative lipoprotein LppB;Dbxref=GO:0005576,GO:0005886;gene=lppB;Parent=GCA000153685_02677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_049244305.1,SO:0001217,UniParc:UPI00005EE6ED,UniRef:UniRef100_P9WK79,UniRef:UniRef50_P9WK79,UniRef:UniRef90_P9WK79
contig_1	Pyrodigal	gene	2863045	2863323	.	+	.	ID=GCA000153685_02678_gene;locus_tag=GCA000153685_02678;gene=vapB18
contig_1	Pyrodigal	CDS	2863045	2863323	.	+	0	ID=GCA000153685_02678;Name=Putative antitoxin VapB18;locus_tag=GCA000153685_02678;product=Putative antitoxin VapB18;gene=vapB18;Parent=GCA000153685_02678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901422.1,SO:0001217,UniParc:UPI00000D0F80,UniRef:UniRef100_P9WJ47,UniRef:UniRef50_P9WJ47,UniRef:UniRef90_P9WJ47
contig_1	Pyrodigal	gene	2863416	2863829	.	+	.	ID=GCA000153685_02679_gene;locus_tag=GCA000153685_02679;gene=vapC18
contig_1	Pyrodigal	CDS	2863416	2863829	.	+	0	ID=GCA000153685_02679;Name=Ribonuclease VapC18;locus_tag=GCA000153685_02679;product=Ribonuclease VapC18;Dbxref=GO:0000287,GO:0004540;gene=vapC18;Parent=GCA000153685_02679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413164.1,SO:0001217,UniParc:UPI00001652FF,UniRef:UniRef100_P95007,UniRef:UniRef50_P95007,UniRef:UniRef90_P95007;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2863853	2864125	.	+	.	ID=GCA000153685_02680_gene;locus_tag=GCA000153685_02680;gene=vapB19
contig_1	Pyrodigal	CDS	2863853	2864125	.	+	0	ID=GCA000153685_02680;Name=Putative antitoxin VapB19;locus_tag=GCA000153685_02680;product=Putative antitoxin VapB19;Dbxref=GO:0006355,GO:0045927;gene=vapB19;Parent=GCA000153685_02680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D5018,UniRef:UniRef100_P95006,UniRef:UniRef50_P95006,UniRef:UniRef90_P95006
contig_1	Pyrodigal	gene	2864122	2864499	.	+	.	ID=GCA000153685_02681_gene;locus_tag=GCA000153685_02681;gene=vapC19
contig_1	Pyrodigal	CDS	2864122	2864499	.	+	0	ID=GCA000153685_02681;Name=Ribonuclease VapC19;locus_tag=GCA000153685_02681;product=Ribonuclease VapC19;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0045926,GO:0051701;gene=vapC19;Parent=GCA000153685_02681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413174.1,SO:0001217,UniParc:UPI00000D0F92,UniRef:UniRef100_P9WF93,UniRef:UniRef50_P9WF93,UniRef:UniRef90_P9WF93;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2864515	2864889	.	-	.	ID=GCA000153685_02682_gene;locus_tag=GCA000153685_02682
contig_1	Pyrodigal	CDS	2864515	2864889	.	-	0	ID=GCA000153685_02682;Name=Conserved protein;locus_tag=GCA000153685_02682;product=Conserved protein;Parent=GCA000153685_02682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413177.1,SO:0001217,UniParc:UPI00000D2CF4,UniRef:UniRef100_I6XEK2,UniRef:UniRef50_A0A0M8Y6Y3,UniRef:UniRef90_I6XEK2
contig_1	Pyrodigal	gene	2864989	2865384	.	-	.	ID=GCA000153685_02683_gene;locus_tag=GCA000153685_02683;gene=vapC20
contig_1	Pyrodigal	CDS	2864989	2865384	.	-	0	ID=GCA000153685_02683;Name=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;locus_tag=GCA000153685_02683;product=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;Dbxref=GO:0000287,GO:0004521,GO:0016075,GO:0044003;gene=vapC20;Parent=GCA000153685_02683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413180,RefSeq:WP_003413180.1,SO:0001217,UniParc:UPI00000C14B2,UniRef:UniRef100_P95004,UniRef:UniRef50_P95004,UniRef:UniRef90_P95004;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2865381	2865626	.	-	.	ID=GCA000153685_02684_gene;locus_tag=GCA000153685_02684;gene=vapB20
contig_1	Pyrodigal	CDS	2865381	2865626	.	-	0	ID=GCA000153685_02684;Name=Antitoxin VapB20;locus_tag=GCA000153685_02684;product=Antitoxin VapB20;Dbxref=GO:0003677,GO:0006355,GO:0097351,GO:0098754;gene=vapB20;Parent=GCA000153685_02684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413183.1,SO:0001217,UniParc:UPI00000D5F20,UniRef:UniRef100_P9WJ44,UniRef:UniRef50_P9WJ45,UniRef:UniRef90_P9WJ45
contig_1	Pyrodigal	gene	2866037	2866456	.	-	.	ID=GCA000153685_02685_gene;locus_tag=GCA000153685_02685
contig_1	Pyrodigal	CDS	2866037	2866456	.	-	0	ID=GCA000153685_02685;Name=Prepilin type IV endopeptidase peptidase domain-containing protein;locus_tag=GCA000153685_02685;product=Prepilin type IV endopeptidase peptidase domain-containing protein;Parent=GCA000153685_02685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413190.1,SO:0001217,UniParc:UPI00000D1049,UniRef:UniRef100_I6Y9M6,UniRef:UniRef50_A0A839RV59,UniRef:UniRef90_R4M8J3
contig_1	Pyrodigal	gene	2866468	2867277	.	-	.	ID=GCA000153685_02686_gene;locus_tag=GCA000153685_02686
contig_1	Pyrodigal	CDS	2866468	2867277	.	-	0	ID=GCA000153685_02686;Name=shikimate dehydrogenase;locus_tag=GCA000153685_02686;product=shikimate dehydrogenase;Dbxref=GO:0004764;Parent=GCA000153685_02686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413193.1,SO:0001217,UniParc:UPI00000D5F03,UniRef:UniRef100_A5U5Q2,UniRef:UniRef50_A0A100XHE8,UniRef:UniRef90_A0A8I0JX79;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	2867274	2868527	.	-	.	ID=GCA000153685_02687_gene;locus_tag=GCA000153685_02687
contig_1	Pyrodigal	CDS	2867274	2868527	.	-	0	ID=GCA000153685_02687;Name=Endolytic murein transglycosylase;locus_tag=GCA000153685_02687;product=Endolytic murein transglycosylase;Parent=GCA000153685_02687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07082,RefSeq:WP_003413196.1,SO:0001217,UniParc:UPI00000D10A2,UniRef:UniRef100_I6XEK6,UniRef:UniRef50_A0A0N9Y641,UniRef:UniRef90_I6XEK6;ec_number=4.2.2.29
contig_1	Pyrodigal	gene	2868520	2868948	.	-	.	ID=GCA000153685_02688_gene;locus_tag=GCA000153685_02688;gene=ruvX
contig_1	Pyrodigal	CDS	2868520	2868948	.	-	0	ID=GCA000153685_02688;Name=Holliday junction resolvase RuvX;locus_tag=GCA000153685_02688;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005829,GO:0006364;gene=ruvX;Parent=GCA000153685_02688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6F1,UniRef:UniRef100_A0A0H3LD80,UniRef:UniRef50_P9WGV7,UniRef:UniRef90_P9WGV7;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	2869033	2871747	.	-	.	ID=GCA000153685_02689_gene;locus_tag=GCA000153685_02689;gene=alaS
contig_1	Pyrodigal	CDS	2869033	2871747	.	-	0	ID=GCA000153685_02689;Name=alanine--tRNA ligase;locus_tag=GCA000153685_02689;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0005886,GO:0006419,GO:0008270,GO:0009274;gene=alaS;Parent=GCA000153685_02689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902305.1,SO:0001217,UniParc:UPI0000136314,UniRef:UniRef100_P9WFW7,UniRef:UniRef50_P9WFW7,UniRef:UniRef90_P9WFW7;ec_number=6.1.1.7
contig_1	Pyrodigal	gene	2871838	2872239	.	-	.	ID=GCA000153685_02690_gene;locus_tag=GCA000153685_02690
contig_1	Pyrodigal	CDS	2871838	2872239	.	-	0	ID=GCA000153685_02690;Name=UPF0047 protein Rv2556c;locus_tag=GCA000153685_02690;product=UPF0047 protein Rv2556c;Dbxref=GO:0009274;Parent=GCA000153685_02690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6F4,UniRef:UniRef100_P9WFP9,UniRef:UniRef50_P9WFP9,UniRef:UniRef90_P9WFP9
contig_1	Pyrodigal	gene	2872334	2873008	.	+	.	ID=GCA000153685_02691_gene;locus_tag=GCA000153685_02691
contig_1	Pyrodigal	CDS	2872334	2873008	.	+	0	ID=GCA000153685_02691;Name=putative protein Rv2557;locus_tag=GCA000153685_02691;product=putative protein Rv2557;Dbxref=GO:0009267;Parent=GCA000153685_02691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899374.1,SO:0001217,UniParc:UPI000013BD37,UniRef:UniRef100_P9WLA5,UniRef:UniRef50_P9WLA5,UniRef:UniRef90_P9WLA5
contig_1	Pyrodigal	gene	2873180	2873803	.	+	.	ID=GCA000153685_02692_gene;locus_tag=GCA000153685_02692
contig_1	Pyrodigal	CDS	2873180	2873803	.	+	0	ID=GCA000153685_02692;Name=putative protein Rv2558;locus_tag=GCA000153685_02692;product=putative protein Rv2558;Dbxref=GO:0009267;Parent=GCA000153685_02692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917020.1,SO:0001217,UniParc:UPI00005EE6F6,UniRef:UniRef100_A0A0H3LG71,UniRef:UniRef50_P9WLA3,UniRef:UniRef90_P9WLA3
contig_1	Pyrodigal	gene	2873833	2875191	.	-	.	ID=GCA000153685_02693_gene;locus_tag=GCA000153685_02693
contig_1	Pyrodigal	CDS	2873833	2875191	.	-	0	ID=GCA000153685_02693;Name=putative AAA domain-containing protein Rv2559c;locus_tag=GCA000153685_02693;product=putative AAA domain-containing protein Rv2559c;Dbxref=GO:0000731,GO:0003677,GO:0005524,GO:0006261,GO:0008047,GO:0016887,GO:0017116;Parent=GCA000153685_02693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07478,RefSeq:WP_003899376.1,SO:0001217,UniParc:UPI000013BD3A,UniRef:UniRef100_P9WQN1,UniRef:UniRef50_P9WQN1,UniRef:UniRef90_P9WQN1
contig_1	Pyrodigal	gene	2875337	2876314	.	+	.	ID=GCA000153685_02694_gene;locus_tag=GCA000153685_02694
contig_1	Pyrodigal	CDS	2875337	2876314	.	+	0	ID=GCA000153685_02694;Name=putative protein Mb2590;locus_tag=GCA000153685_02694;product=putative protein Mb2590;Dbxref=GO:0005886;Parent=GCA000153685_02694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899377.1,SO:0001217,UniParc:UPI00001A9120,UniRef:UniRef100_P59983,UniRef:UniRef50_P9WLA1,UniRef:UniRef90_P9WLA1
contig_1	Pyrodigal	gene	2876227	2876550	.	-	.	ID=GCA000153685_02695_gene;locus_tag=GCA000153685_02695
contig_1	Pyrodigal	CDS	2876227	2876550	.	-	0	ID=GCA000153685_02695;Name=hypothetical protein;locus_tag=GCA000153685_02695;product=hypothetical protein;Parent=GCA000153685_02695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2CF7,UniRef:UniRef100_A5U5R1,UniRef:UniRef50_A5U5R1,UniRef:UniRef90_A5U5R1
contig_1	Pyrodigal	gene	2876901	2877407	.	+	.	ID=GCA000153685_02696_gene;locus_tag=GCA000153685_02696
contig_1	Pyrodigal	CDS	2876901	2877407	.	+	0	ID=GCA000153685_02696;Name=putative protein Rv2561/Rv2562;locus_tag=GCA000153685_02696;product=putative protein Rv2561/Rv2562;Parent=GCA000153685_02696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A52A,UniRef:UniRef100_A0A0H3LC42,UniRef:UniRef50_P9WL99,UniRef:UniRef90_P9WL99
contig_1	Pyrodigal	gene	2877550	2878599	.	+	.	ID=GCA000153685_02697_gene;locus_tag=GCA000153685_02697
contig_1	Pyrodigal	CDS	2877550	2878599	.	+	0	ID=GCA000153685_02697;Name=putative ABC transporter permease Mb2592;locus_tag=GCA000153685_02697;product=putative ABC transporter permease Mb2592;Dbxref=GO:0005886;Parent=GCA000153685_02697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413230.1,SO:0001217,UniParc:UPI000013BD41,UniRef:UniRef100_P9WG15,UniRef:UniRef50_P9WG17,UniRef:UniRef90_P9WG15
contig_1	Pyrodigal	gene	2878602	2879594	.	+	.	ID=GCA000153685_02698_gene;locus_tag=GCA000153685_02698
contig_1	Pyrodigal	CDS	2878602	2879594	.	+	0	ID=GCA000153685_02698;Name=putative ABC transporter ATP-binding protein Mb2593;locus_tag=GCA000153685_02698;product=putative ABC transporter ATP-binding protein Mb2593;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857;Parent=GCA000153685_02698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899378.1,SO:0001217,UniParc:UPI000013BD42,UniRef:UniRef100_P9WQI5,UniRef:UniRef50_P9WQK5,UniRef:UniRef90_P9WQI5
contig_1	Pyrodigal	gene	2879871	2881622	.	+	.	ID=GCA000153685_02699_gene;locus_tag=GCA000153685_02699
contig_1	Pyrodigal	CDS	2879871	2881622	.	+	0	ID=GCA000153685_02699;Name=putative NTE family protein Mb2594;locus_tag=GCA000153685_02699;product=putative NTE family protein Mb2594;Dbxref=GO:0004622,GO:0016042,GO:0046470;Parent=GCA000153685_02699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900851.1,SO:0001217,UniParc:UPI00012780DE,UniRef:UniRef100_A0A0H3LJ08,UniRef:UniRef50_P9WIY7,UniRef:UniRef90_P9WIY7
contig_1	Pyrodigal	gene	2881714	2885055	.	+	.	ID=GCA000153685_02700_gene;locus_tag=GCA000153685_02700
contig_1	Pyrodigal	CDS	2881714	2885055	.	+	0	ID=GCA000153685_02700;Name=Transglutaminase-like domain-containing protein;locus_tag=GCA000153685_02700;product=Transglutaminase-like domain-containing protein;Parent=GCA000153685_02700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913357.1,SO:0001217,UniParc:UPI00005EE6FA,UniRef:UniRef100_A0A0H3LC62,UniRef:UniRef50_G8RII4,UniRef:UniRef90_A0A0H3LC62
contig_1	Pyrodigal	gene	2885055	2887709	.	+	.	ID=GCA000153685_02701_gene;locus_tag=GCA000153685_02701
contig_1	Pyrodigal	CDS	2885055	2887709	.	+	0	ID=GCA000153685_02701;Name=putative protein Mb2597;locus_tag=GCA000153685_02701;product=putative protein Mb2597;Dbxref=GO:0005886;Parent=GCA000153685_02701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900852.1,SO:0001217,UniParc:UPI00012780DF,UniRef:UniRef100_UPI00012780DF,UniRef:UniRef50_P9WL97,UniRef:UniRef90_P9WL97
contig_1	Pyrodigal	gene	2887706	2888731	.	-	.	ID=GCA000153685_02702_gene;locus_tag=GCA000153685_02702
contig_1	Pyrodigal	CDS	2887706	2888731	.	-	0	ID=GCA000153685_02702;Name=putative protein Rv2568c;locus_tag=GCA000153685_02702;product=putative protein Rv2568c;Parent=GCA000153685_02702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413332.1,SO:0001217,UniParc:UPI000013BD4B,UniRef:UniRef100_P9WL95,UniRef:UniRef50_P9WL95,UniRef:UniRef90_P9WL95
contig_1	Pyrodigal	gene	2888724	2889668	.	-	.	ID=GCA000153685_02703_gene;locus_tag=GCA000153685_02703
contig_1	Pyrodigal	CDS	2888724	2889668	.	-	0	ID=GCA000153685_02703;Name=putative protein Rv2569c;locus_tag=GCA000153685_02703;product=putative protein Rv2569c;Dbxref=GO:0005886;Parent=GCA000153685_02703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413334.1,SO:0001217,UniParc:UPI000013BD4F,UniRef:UniRef100_P9WL93,UniRef:UniRef50_P9WL93,UniRef:UniRef90_P9WL93
contig_1	Pyrodigal	gene	2889772	2890161	.	+	.	ID=GCA000153685_02704_gene;locus_tag=GCA000153685_02704
contig_1	Pyrodigal	CDS	2889772	2890161	.	+	0	ID=GCA000153685_02704;Name=putative protein MT2646;locus_tag=GCA000153685_02704;product=putative protein MT2646;Parent=GCA000153685_02704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413336.1,SO:0001217,UniParc:UPI000013BD52,UniRef:UniRef100_P9WL91,UniRef:UniRef50_P9WL91,UniRef:UniRef90_P9WL91
contig_1	Pyrodigal	gene	2890153	2891220	.	-	.	ID=GCA000153685_02705_gene;locus_tag=GCA000153685_02705
contig_1	Pyrodigal	CDS	2890153	2891220	.	-	0	ID=GCA000153685_02705;Name=Putative arylamide transporter;locus_tag=GCA000153685_02705;product=Putative arylamide transporter;Dbxref=GO:0005886;Parent=GCA000153685_02705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899381.1,SO:0001217,UniParc:UPI000013BD55,UniRef:UniRef100_P9WL89,UniRef:UniRef50_P9WL89,UniRef:UniRef90_P9WL89
contig_1	Pyrodigal	gene	2891273	2893057	.	-	.	ID=GCA000153685_02706_gene;locus_tag=GCA000153685_02706;gene=aspS
contig_1	Pyrodigal	CDS	2891273	2893057	.	-	0	ID=GCA000153685_02706;Name=aspartate--tRNA ligase;locus_tag=GCA000153685_02706;product=aspartate--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006418,GO:0006422,GO:0009274,GO:0016874,GO:0050560;gene=aspS;Parent=GCA000153685_02706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001363A7,UniRef:UniRef100_P9WFW3,UniRef:UniRef50_P9WFW3,UniRef:UniRef90_P9WFW3;ec_number=6.1.1.23
contig_1	Pyrodigal	gene	2893216	2894043	.	+	.	ID=GCA000153685_02707_gene;locus_tag=GCA000153685_02707
contig_1	Pyrodigal	CDS	2893216	2894043	.	+	0	ID=GCA000153685_02707;Name=oxidoreductase;locus_tag=GCA000153685_02707;product=oxidoreductase;Dbxref=GO:0005737,GO:0005829,GO:0008677,GO:0015940,GO:0050661;Parent=GCA000153685_02707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012780E0,UniRef:UniRef100_A0A0H3LG84,UniRef:UniRef50_P9WIL1,UniRef:UniRef90_P9WIL1;ec_number=1.1.1.169
contig_1	Pyrodigal	gene	2894066	2894569	.	+	.	ID=GCA000153685_02708_gene;locus_tag=GCA000153685_02708
contig_1	Pyrodigal	CDS	2894066	2894569	.	+	0	ID=GCA000153685_02708;Name=putative protein Rv2574;locus_tag=GCA000153685_02708;product=putative protein Rv2574;Dbxref=GO:0005886;Parent=GCA000153685_02708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413345.1,SO:0001217,UniParc:UPI000013BD5A,UniRef:UniRef100_P9WL87,UniRef:UniRef50_P9WL87,UniRef:UniRef90_P9WL87
contig_1	Pyrodigal	gene	2894599	2895480	.	+	.	ID=GCA000153685_02709_gene;locus_tag=GCA000153685_02709
contig_1	Pyrodigal	CDS	2894599	2895480	.	+	0	ID=GCA000153685_02709;Name=putative protein Rv2575;locus_tag=GCA000153685_02709;product=putative protein Rv2575;Dbxref=GO:0005576,GO:0016020;Parent=GCA000153685_02709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07054,RefSeq:WP_003899384.1,SO:0001217,UniParc:UPI000013BD5B,UniRef:UniRef100_P9WL85,UniRef:UniRef50_P9WL85,UniRef:UniRef90_P9WL85
contig_1	Pyrodigal	gene	2895486	2895908	.	-	.	ID=GCA000153685_02710_gene;locus_tag=GCA000153685_02710
contig_1	Pyrodigal	CDS	2895486	2895908	.	-	0	ID=GCA000153685_02710;Name=putative protein Rv2576c;locus_tag=GCA000153685_02710;product=putative protein Rv2576c;Dbxref=GO:0005576,GO:0009274,GO:0016020;Parent=GCA000153685_02710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6FD,UniRef:UniRef100_P9WL83,UniRef:UniRef50_P9WL83,UniRef:UniRef90_P9WL83
contig_1	Pyrodigal	gene	2896370	2897767	.	+	.	ID=GCA000153685_02711_gene;locus_tag=GCA000153685_02711
contig_1	Pyrodigal	CDS	2896370	2897767	.	+	0	ID=GCA000153685_02711;Name=putative protein Rv2577;locus_tag=GCA000153685_02711;product=putative protein Rv2577;Dbxref=GO:0003993,GO:0005886,GO:0046872;Parent=GCA000153685_02711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE6FE,UniRef:UniRef100_A0A0E8M5F0,UniRef:UniRef50_P9WL81,UniRef:UniRef90_P9WL81
contig_1	Pyrodigal	gene	2897769	2898791	.	-	.	ID=GCA000153685_02712_gene;locus_tag=GCA000153685_02712
contig_1	Pyrodigal	CDS	2897769	2898791	.	-	0	ID=GCA000153685_02712;Name=Rv2578c family radical SAM protein;locus_tag=GCA000153685_02712;product=Rv2578c family radical SAM protein;Dbxref=GO:0003824,GO:0005886,GO:0046872,GO:0051536,GO:0051539;Parent=GCA000153685_02712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900854.1,SO:0001217,UniParc:UPI00012780E1,UniRef:UniRef100_UPI00012780E1,UniRef:UniRef50_P9WL79,UniRef:UniRef90_P9WL79
contig_1	Pyrodigal	gene	2898899	2899801	.	+	.	ID=GCA000153685_02713_gene;locus_tag=GCA000153685_02713;gene=dhaA
contig_1	Pyrodigal	CDS	2898899	2899801	.	+	0	ID=GCA000153685_02713;Name=haloalkane dehalogenase;locus_tag=GCA000153685_02713;product=haloalkane dehalogenase;Dbxref=GO:0005886,GO:0009274,GO:0016787,GO:0018786,GO:0042206;gene=dhaA;Parent=GCA000153685_02713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413363.1,SO:0001217,UniParc:UPI000012926D,UniRef:UniRef100_P9WMR9,UniRef:UniRef50_D4Z2G1,UniRef:UniRef90_P9WMR9;ec_number=3.8.1.5
contig_1	Pyrodigal	gene	2900081	2901352	.	-	.	ID=GCA000153685_02714_gene;locus_tag=GCA000153685_02714;gene=hisS
contig_1	Pyrodigal	CDS	2900081	2901352	.	-	0	ID=GCA000153685_02714;Name=histidine--tRNA ligase;locus_tag=GCA000153685_02714;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427;gene=hisS;Parent=GCA000153685_02714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_003413365.1,SO:0001217,UniParc:UPI00001364D5,UniRef:UniRef100_P9WFV5,UniRef:UniRef50_P9WFV5,UniRef:UniRef90_P9WFV5;ec_number=6.1.1.21
contig_1	Pyrodigal	gene	2901349	2902023	.	-	.	ID=GCA000153685_02715_gene;locus_tag=GCA000153685_02715
contig_1	Pyrodigal	CDS	2901349	2902023	.	-	0	ID=GCA000153685_02715;Name=putative protein Mb2612c;locus_tag=GCA000153685_02715;product=putative protein Mb2612c;Dbxref=GO:0016787,GO:0046872;Parent=GCA000153685_02715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413366.1,SO:0001217,UniParc:UPI000013BD67,UniRef:UniRef100_P9WMW3,UniRef:UniRef50_P9WMW3,UniRef:UniRef90_P9WMW3;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2902074	2903000	.	+	.	ID=GCA000153685_02716_gene;locus_tag=GCA000153685_02716;gene=ppiB
contig_1	Pyrodigal	CDS	2902074	2903000	.	+	0	ID=GCA000153685_02716;Name=peptidylprolyl isomerase PpiB;locus_tag=GCA000153685_02716;product=peptidylprolyl isomerase PpiB;Dbxref=GO:0003755,GO:0005886,GO:0006457,GO:0140839,GO:0140840;gene=ppiB;Parent=GCA000153685_02716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917032,RefSeq:WP_003413367.1,SO:0001217,UniParc:UPI000004CF49,UniRef:UniRef100_P9WHW1,UniRef:UniRef50_P9WHW1,UniRef:UniRef90_P9WHW1;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	2903086	2905458	.	-	.	ID=GCA000153685_02717_gene;locus_tag=GCA000153685_02717;gene=relA
contig_1	Pyrodigal	CDS	2903086	2905458	.	-	0	ID=GCA000153685_02717;Name=putative GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase);locus_tag=GCA000153685_02717;product=putative GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase);Dbxref=GO:0003999,GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0008893,GO:0009116,GO:0009274,GO:0015968,GO:0015970,GO:0016301,GO:0030145;gene=relA;Parent=GCA000153685_02717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,RefSeq:WP_003413368.1,SO:0001217,UniParc:UPI000013365C,UniRef:UniRef100_P9WHG9,UniRef:UniRef50_P9WHG9,UniRef:UniRef90_P9WHG9,VFDB:VFC0301,VFDB:VFG001826;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	2905489	2906160	.	-	.	ID=GCA000153685_02718_gene;locus_tag=GCA000153685_02718;gene=apt
contig_1	Pyrodigal	CDS	2905489	2906160	.	-	0	ID=GCA000153685_02718;Name=adenine phosphoribosyltransferase;locus_tag=GCA000153685_02718;product=adenine phosphoribosyltransferase;Dbxref=GO:0003999,GO:0005737,GO:0005886,GO:0006166,GO:0006168,GO:0009116,GO:0044209;gene=apt;Parent=GCA000153685_02718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413369.1,SO:0001217,UniParc:UPI0000165114,UniRef:UniRef100_P59959,UniRef:UniRef50_P9WQ06,UniRef:UniRef90_P9WQ06;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	2906264	2907937	.	-	.	ID=GCA000153685_02719_gene;locus_tag=GCA000153685_02719
contig_1	Pyrodigal	CDS	2906264	2907937	.	-	0	ID=GCA000153685_02719;Name=putative lipoprotein Mb2616c;locus_tag=GCA000153685_02719;product=putative lipoprotein Mb2616c;Dbxref=GO:0005886,GO:0015833,GO:1904680;Parent=GCA000153685_02719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413373.1,SO:0001217,UniParc:UPI0000165115,UniRef:UniRef100_P9WL76,UniRef:UniRef50_P9WL77,UniRef:UniRef90_P9WL77
contig_1	Pyrodigal	gene	2907943	2909271	.	-	.	ID=GCA000153685_02720_gene;locus_tag=GCA000153685_02720;gene=secF
contig_1	Pyrodigal	CDS	2907943	2909271	.	-	0	ID=GCA000153685_02720;Name=Protein translocase subunit SecF;locus_tag=GCA000153685_02720;product=Protein translocase subunit SecF;Dbxref=GO:0005886,GO:0006605,GO:0009274,GO:0015031,GO:0015450,GO:0043952,GO:0065002;gene=secF;Parent=GCA000153685_02720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899387.1,SO:0001217,UniParc:UPI00001357B0,UniRef:UniRef100_P9WGN9,UniRef:UniRef50_P9WGN9,UniRef:UniRef90_P9WGN9
contig_1	Pyrodigal	gene	2909275	2910996	.	-	.	ID=GCA000153685_02721_gene;locus_tag=GCA000153685_02721;gene=secD
contig_1	Pyrodigal	CDS	2909275	2910996	.	-	0	ID=GCA000153685_02721;Name=Protein translocase subunit SecD;locus_tag=GCA000153685_02721;product=Protein translocase subunit SecD;Dbxref=GO:0005829,GO:0005886,GO:0006605,GO:0009274,GO:0015031,GO:0015450,GO:0043952,GO:0065002;gene=secD;Parent=GCA000153685_02721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413385.1,SO:0001217,UniParc:UPI0000135784,UniRef:UniRef100_P9WGP1,UniRef:UniRef50_P9WGP1,UniRef:UniRef90_P9WGP1
contig_1	Pyrodigal	gene	2911106	2911453	.	-	.	ID=GCA000153685_02722_gene;locus_tag=GCA000153685_02722;gene=yajC
contig_1	Pyrodigal	CDS	2911106	2911453	.	-	0	ID=GCA000153685_02722;Name=preprotein translocase subunit YajC;locus_tag=GCA000153685_02722;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015031,GO:0015450;gene=yajC;Parent=GCA000153685_02722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03210,RefSeq:WP_003413391.1,SO:0001217,UniParc:UPI000013BD6F,UniRef:UniRef100_P9WL75,UniRef:UniRef50_P9WL75,UniRef:UniRef90_P9WL75
contig_1	Pyrodigal	gene	2911620	2912969	.	+	.	ID=GCA000153685_02723_gene;locus_tag=GCA000153685_02723;gene=gabT
contig_1	Pyrodigal	CDS	2911620	2912969	.	+	0	ID=GCA000153685_02723;Name=4-aminobutyrate--2-oxoglutarate transaminase;locus_tag=GCA000153685_02723;product=4-aminobutyrate--2-oxoglutarate transaminase;Dbxref=GO:0005829,GO:0005886,GO:0009448,GO:0009450,GO:0030170,GO:0034386,GO:0047298;gene=gabT;Parent=GCA000153685_02723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413395.1,SO:0001217,UniParc:UPI000012AFBD,UniRef:UniRef100_P9WQ79,UniRef:UniRef50_P9WQ79,UniRef:UniRef90_P9WQ79;ec_number=2.6.1.19
contig_1	Pyrodigal	gene	2913131	2916637	.	+	.	ID=GCA000153685_02724_gene;locus_tag=GCA000153685_02724;gene=car
contig_1	Pyrodigal	CDS	2913131	2916637	.	+	0	ID=GCA000153685_02724;Name=carboxylic acid reductase;locus_tag=GCA000153685_02724;product=carboxylic acid reductase;Dbxref=GO:0004467,GO:0005524,GO:0005829,GO:0005886,GO:0006629,GO:0009058,GO:0016020,GO:0016620,GO:0031177,GO:0050661;gene=car;Parent=GCA000153685_02724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12421,RefSeq:WP_003413409.1,SO:0001217,UniParc:UPI00000CCC14,UniRef:UniRef100_Q50631,UniRef:UniRef50_Q50631,UniRef:UniRef90_Q50631;ec_number=1.2.1.-
contig_1	Pyrodigal	gene	2916811	2918442	.	+	.	ID=GCA000153685_02725_gene;locus_tag=GCA000153685_02725;gene=pE_PGRS44
contig_1	Pyrodigal	CDS	2916811	2918442	.	+	0	ID=GCA000153685_02725;Name=putative PE-PGRS family protein PE_PGRS44;locus_tag=GCA000153685_02725;product=putative PE-PGRS family protein PE_PGRS44;gene=pE_PGRS44;Parent=GCA000153685_02725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886152.1,SO:0001217,UniParc:UPI000013BD72,UniRef:UniRef100_P9WIE9,UniRef:UniRef50_P9WIE9,UniRef:UniRef90_P9WIE9
contig_1	Pyrodigal	gene	2918459	2919493	.	-	.	ID=GCA000153685_02726_gene;locus_tag=GCA000153685_02726;gene=ruvB
contig_1	Pyrodigal	CDS	2918459	2919493	.	-	0	ID=GCA000153685_02726;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000153685_02726;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000153685_02726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413416.1,SO:0001217,UniParc:UPI0000135386,UniRef:UniRef100_P9WGW1,UniRef:UniRef50_Q51426,UniRef:UniRef90_P9WGW1;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	2919490	2920080	.	-	.	ID=GCA000153685_02727_gene;locus_tag=GCA000153685_02727;gene=ruvA
contig_1	Pyrodigal	CDS	2919490	2920080	.	-	0	ID=GCA000153685_02727;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000153685_02727;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000153685_02727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413421.1,SO:0001217,UniParc:UPI0000135353,UniRef:UniRef100_P9WGW3,UniRef:UniRef50_P9WGW3,UniRef:UniRef90_P9WGW3;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	2920077	2920643	.	-	.	ID=GCA000153685_02728_gene;locus_tag=GCA000153685_02728;gene=ruvC
contig_1	Pyrodigal	CDS	2920077	2920643	.	-	0	ID=GCA000153685_02728;Name=crossover junction endodeoxyribonuclease RuvC;locus_tag=GCA000153685_02728;product=crossover junction endodeoxyribonuclease RuvC;Dbxref=GO:0000287,GO:0003677,GO:0005737,GO:0006281,GO:0006310,GO:0008821,GO:0048476;gene=ruvC;Parent=GCA000153685_02728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01159,RefSeq:WP_003413426.1,SO:0001217,UniParc:UPI00001353AF,UniRef:UniRef100_P9WGV9,UniRef:UniRef50_P9WGV9,UniRef:UniRef90_P9WGV9;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	2920785	2920997	.	+	.	ID=GCA000153685_02729_gene;locus_tag=GCA000153685_02729;gene=vapB40
contig_1	Pyrodigal	CDS	2920785	2920997	.	+	0	ID=GCA000153685_02729;Name=putative protein Mb2626;locus_tag=GCA000153685_02729;product=putative protein Mb2626;Dbxref=GO:0003677;gene=vapB40;Parent=GCA000153685_02729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019013BC,UniRef:UniRef100_A0A0E7ZL14,UniRef:UniRef50_P9WFC3,UniRef:UniRef90_P9WFC3
contig_1	Pyrodigal	gene	2920994	2921398	.	+	.	ID=GCA000153685_02730_gene;locus_tag=GCA000153685_02730;gene=vapC40
contig_1	Pyrodigal	CDS	2920994	2921398	.	+	0	ID=GCA000153685_02730;Name=Ribonuclease VapC40;locus_tag=GCA000153685_02730;product=Ribonuclease VapC40;Dbxref=GO:0000287,GO:0004540;gene=vapC40;Parent=GCA000153685_02730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899389.1,SO:0001217,UniParc:UPI000013BD7A,UniRef:UniRef100_P9WF61,UniRef:UniRef50_P9WF61,UniRef:UniRef90_P9WF61;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2921615	2922235	.	+	.	ID=GCA000153685_02731_gene;locus_tag=GCA000153685_02731
contig_1	Pyrodigal	CDS	2921615	2922235	.	+	0	ID=GCA000153685_02731;Name=putative protein Rv2597;locus_tag=GCA000153685_02731;product=putative protein Rv2597;Dbxref=GO:0005886;Parent=GCA000153685_02731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413441.1,SO:0001217,UniParc:UPI000013BD7C,UniRef:UniRef100_P9WL73,UniRef:UniRef50_P9WL73,UniRef:UniRef90_P9WL73
contig_1	Pyrodigal	gene	2922246	2922740	.	+	.	ID=GCA000153685_02732_gene;locus_tag=GCA000153685_02732
contig_1	Pyrodigal	CDS	2922246	2922740	.	+	0	ID=GCA000153685_02732;Name=putative protein Rv2598;locus_tag=GCA000153685_02732;product=putative protein Rv2598;Parent=GCA000153685_02732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413444.1,SO:0001217,UniParc:UPI000013BD7E,UniRef:UniRef100_P9WL71,UniRef:UniRef50_P9WL71,UniRef:UniRef90_P9WL71
contig_1	Pyrodigal	gene	2922737	2923168	.	+	.	ID=GCA000153685_02733_gene;locus_tag=GCA000153685_02733
contig_1	Pyrodigal	CDS	2922737	2923168	.	+	0	ID=GCA000153685_02733;Name=putative protein Rv2599;locus_tag=GCA000153685_02733;product=putative protein Rv2599;Dbxref=GO:0005576,GO:0016020;Parent=GCA000153685_02733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899390.1,SO:0001217,UniParc:UPI000013BD80,UniRef:UniRef100_P9WL69,UniRef:UniRef50_P9WL69,UniRef:UniRef90_P9WL69
contig_1	Pyrodigal	gene	2923193	2923651	.	+	.	ID=GCA000153685_02734_gene;locus_tag=GCA000153685_02734
contig_1	Pyrodigal	CDS	2923193	2923651	.	+	0	ID=GCA000153685_02734;Name=UPF0719 transmembrane protein Mb2631;locus_tag=GCA000153685_02734;product=UPF0719 transmembrane protein Mb2631;Dbxref=GO:0005886;Parent=GCA000153685_02734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08989,RefSeq:WP_003413451.1,SO:0001217,UniParc:UPI000013BE70,UniRef:UniRef100_P9WFG5,UniRef:UniRef50_P9WFG5,UniRef:UniRef90_P9WFG5
contig_1	Pyrodigal	gene	2923648	2925219	.	+	.	ID=GCA000153685_02735_gene;locus_tag=GCA000153685_02735;gene=speE
contig_1	Pyrodigal	CDS	2923648	2925219	.	+	0	ID=GCA000153685_02735;Name=polyamine aminopropyltransferase;locus_tag=GCA000153685_02735;product=polyamine aminopropyltransferase;Dbxref=GO:0003824,GO:0004766,GO:0005886,GO:0006596,GO:0008295,GO:0009274;gene=speE;Parent=GCA000153685_02735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899392.1,SO:0001217,UniParc:UPI00000D0FFA,UniRef:UniRef100_P9WGE5,UniRef:UniRef50_P9WGE5,UniRef:UniRef90_P9WGE5;ec_number=2.5.1.16
contig_1	Pyrodigal	gene	2925330	2925617	.	+	.	ID=GCA000153685_02736_gene;locus_tag=GCA000153685_02736;gene=vapB41
contig_1	Pyrodigal	CDS	2925330	2925617	.	+	0	ID=GCA000153685_02736;Name=Antitoxin VapB41;locus_tag=GCA000153685_02736;product=Antitoxin VapB41;Dbxref=GO:0006355,GO:0045927;gene=vapB41;Parent=GCA000153685_02736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413456.1,SO:0001217,UniParc:UPI00000D2CFB,UniRef:UniRef100_P9WJ21,UniRef:UniRef50_P9WJ21,UniRef:UniRef90_P9WJ21
contig_1	Pyrodigal	gene	2925604	2926044	.	+	.	ID=GCA000153685_02737_gene;locus_tag=GCA000153685_02737;gene=vapC41
contig_1	Pyrodigal	CDS	2925604	2926044	.	+	0	ID=GCA000153685_02737;Name=Ribonuclease VapC41;locus_tag=GCA000153685_02737;product=Ribonuclease VapC41;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0045926;gene=vapC41;Parent=GCA000153685_02737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413460.1,SO:0001217,UniParc:UPI00000D1184,UniRef:UniRef100_P9WF59,UniRef:UniRef50_P9WF59,UniRef:UniRef90_P9WF59;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2926065	2926820	.	-	.	ID=GCA000153685_02738_gene;locus_tag=GCA000153685_02738;gene=tACO1
contig_1	Pyrodigal	CDS	2926065	2926820	.	-	0	ID=GCA000153685_02738;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000153685_02738;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA000153685_02738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_003413464.1,SO:0001217,UniParc:UPI000013BE73,UniRef:UniRef100_P9WGA5,UniRef:UniRef50_A0QWH1,UniRef:UniRef90_P9WGA5
contig_1	Pyrodigal	gene	2926953	2927549	.	-	.	ID=GCA000153685_02739_gene;locus_tag=GCA000153685_02739;gene=pdxT
contig_1	Pyrodigal	CDS	2926953	2927549	.	-	0	ID=GCA000153685_02739;Name=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;locus_tag=GCA000153685_02739;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;Dbxref=GO:0004359,GO:0005829,GO:0006543,GO:0008614,GO:0016843,GO:0016884,GO:0036381,GO:0042823,GO:1903600;gene=pdxT;Parent=GCA000153685_02739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08681,RefSeq:WP_003413465.1,SO:0001217,UniParc:UPI00000D5E47,UniRef:UniRef100_P9WII7,UniRef:UniRef50_A0QWH0,UniRef:UniRef90_P9WII7;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	2927557	2928402	.	-	.	ID=GCA000153685_02740_gene;locus_tag=GCA000153685_02740;gene=tesB
contig_1	Pyrodigal	CDS	2927557	2928402	.	-	0	ID=GCA000153685_02740;Name=acyl-CoA thioesterase II;locus_tag=GCA000153685_02740;product=acyl-CoA thioesterase II;Dbxref=GO:0006637,GO:0047617;gene=tesB;Parent=GCA000153685_02740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413466.1,SO:0001217,UniParc:UPI00000D1174,UniRef:UniRef100_A5U5V6,UniRef:UniRef50_A0A0N7H8M0,UniRef:UniRef90_A0A655IU20
contig_1	Pyrodigal	gene	2928431	2929330	.	-	.	ID=GCA000153685_02741_gene;locus_tag=GCA000153685_02741;gene=pdxS
contig_1	Pyrodigal	CDS	2928431	2929330	.	-	0	ID=GCA000153685_02741;Name=pyridoxal 5'-phosphate synthase lyase subunit PdxS;locus_tag=GCA000153685_02741;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;Dbxref=GO:0003824,GO:0005886,GO:0006520,GO:0008615,GO:0016843,GO:0036381,GO:0042823;gene=pdxS;Parent=GCA000153685_02741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06215,RefSeq:WP_003413468.1,SO:0001217,UniParc:UPI000013BE77,UniRef:UniRef100_P9WII9,UniRef:UniRef50_P9WII9,UniRef:UniRef90_P9WII9;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	2929458	2930132	.	+	.	ID=GCA000153685_02742_gene;locus_tag=GCA000153685_02742;gene=pdxH
contig_1	Pyrodigal	CDS	2929458	2930132	.	+	0	ID=GCA000153685_02742;Name=pyridoxamine 5'-phosphate oxidase;locus_tag=GCA000153685_02742;product=pyridoxamine 5'-phosphate oxidase;Dbxref=GO:0004733,GO:0008615,GO:0010181,GO:0016899,GO:0042803,GO:0042823;gene=pdxH;Parent=GCA000153685_02742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413471.1,SO:0001217,UniParc:UPI0000131509,UniRef:UniRef100_P9WIJ1,UniRef:UniRef50_P9WIJ1,UniRef:UniRef90_P9WIJ1;ec_number=1.4.3.5
contig_1	Pyrodigal	gene	2930306	2932048	.	+	.	ID=GCA000153685_02743_gene;locus_tag=GCA000153685_02743;gene=pPE42
contig_1	Pyrodigal	CDS	2930306	2932048	.	+	0	ID=GCA000153685_02743;Name=putative PPE family protein PPE42;locus_tag=GCA000153685_02743;product=putative PPE family protein PPE42;Dbxref=GO:0052167,GO:0052572;gene=pPE42;Parent=GCA000153685_02743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899395.1,SO:0001217,UniParc:UPI00000D4F31,UniRef:UniRef100_P9WHZ5,UniRef:UniRef50_P9WHZ5,UniRef:UniRef90_P9WHZ5
contig_1	Pyrodigal	gene	2932070	2933125	.	-	.	ID=GCA000153685_02744_gene;locus_tag=GCA000153685_02744
contig_1	Pyrodigal	CDS	2932070	2933125	.	-	0	ID=GCA000153685_02744;Name=Conserved membrane protein;locus_tag=GCA000153685_02744;product=Conserved membrane protein;Parent=GCA000153685_02744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413475.1,SO:0001217,UniParc:UPI00000D5F8A,UniRef:UniRef100_A5U5W0,UniRef:UniRef50_A0A143QQB6,UniRef:UniRef90_A5U5W0
contig_1	Pyrodigal	gene	2933125	2934261	.	-	.	ID=GCA000153685_02745_gene;locus_tag=GCA000153685_02745;gene=pimA
contig_1	Pyrodigal	CDS	2933125	2934261	.	-	0	ID=GCA000153685_02745;Name=phosphatidyl-myo-inositol alpha-mannosyltransferase;locus_tag=GCA000153685_02745;product=phosphatidyl-myo-inositol alpha-mannosyltransferase;Dbxref=GO:0000030,GO:0000287,GO:0004377,GO:0005886,GO:0008654,GO:0009247,GO:0016757,GO:0043750,GO:0046488;gene=pimA;Parent=GCA000153685_02745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413478,BlastRules:WP_011728703,KEGG:K08256,RefSeq:WP_003413478.1,SO:0001217,UniParc:UPI00000C158A,UniRef:UniRef100_P9WMZ5,UniRef:UniRef50_P9WMZ5,UniRef:UniRef90_P9WMZ5;ec_number=2.4.1.345
contig_1	Pyrodigal	gene	2934272	2935222	.	-	.	ID=GCA000153685_02746_gene;locus_tag=GCA000153685_02746;gene=patA
contig_1	Pyrodigal	CDS	2934272	2935222	.	-	0	ID=GCA000153685_02746;Name=phosphatidylinositol mannoside acyltransferase;locus_tag=GCA000153685_02746;product=phosphatidylinositol mannoside acyltransferase;Dbxref=GO:0005886,GO:0008654,GO:0009247,GO:0016020,GO:0016740,GO:0016746,GO:0046488;gene=patA;Parent=GCA000153685_02746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22311,RefSeq:WP_003900533.1,SO:0001217,UniParc:UPI000016511E,UniRef:UniRef100_P9WMB4,UniRef:UniRef50_A0QWG5,UniRef:UniRef90_P9WMB5;ec_number=2.3.1.265
contig_1	Pyrodigal	gene	2935219	2935872	.	-	.	ID=GCA000153685_02747_gene;locus_tag=GCA000153685_02747;gene=pgsA1
contig_1	Pyrodigal	CDS	2935219	2935872	.	-	0	ID=GCA000153685_02747;Name=phosphatidylinositol phosphate synthase;locus_tag=GCA000153685_02747;product=phosphatidylinositol phosphate synthase;Dbxref=GO:0000287,GO:0003881,GO:0005886,GO:0008654,GO:0009274,GO:0016780,GO:0046474;gene=pgsA1;Parent=GCA000153685_02747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413482,KEGG:K27681,RefSeq:WP_003413482.1,SO:0001217,UniParc:UPI00000D5EC3,UniRef:UniRef100_P9WPG7,UniRef:UniRef50_P9WPG7,UniRef:UniRef90_P9WPG7;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2935869	2936456	.	-	.	ID=GCA000153685_02748_gene;locus_tag=GCA000153685_02748
contig_1	Pyrodigal	CDS	2935869	2936456	.	-	0	ID=GCA000153685_02748;Name=ATP adenylyltransferase;locus_tag=GCA000153685_02748;product=ATP adenylyltransferase;Dbxref=GO:0003877,GO:0005524,GO:0005886,GO:0008796,GO:0015967;Parent=GCA000153685_02748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413484,KEGG:K19710,RefSeq:WP_003413484.1,SO:0001217,UniParc:UPI00000D5E95,UniRef:UniRef100_P9WMK9,UniRef:UniRef50_P9WMK9,UniRef:UniRef90_P9WMK9;ec_number=2.7.7.53
contig_1	Pyrodigal	gene	2936449	2938527	.	-	.	ID=GCA000153685_02749_gene;locus_tag=GCA000153685_02749;gene=thrS
contig_1	Pyrodigal	CDS	2936449	2938527	.	-	0	ID=GCA000153685_02749;Name=threonine--tRNA ligase;locus_tag=GCA000153685_02749;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0006435,GO:0046872;gene=thrS;Parent=GCA000153685_02749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01868,RefSeq:WP_003413486.1,SO:0001217,UniParc:UPI00001366C4,UniRef:UniRef100_P9WFT5,UniRef:UniRef50_P9WFT5,UniRef:UniRef90_P9WFT5;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	2938860	2940245	.	-	.	ID=GCA000153685_02750_gene;locus_tag=GCA000153685_02750;gene=pE_PGRS45
contig_1	Pyrodigal	CDS	2938860	2940245	.	-	0	ID=GCA000153685_02750;Name=PE-PGRS family protein PE_PGRS45;locus_tag=GCA000153685_02750;product=PE-PGRS family protein PE_PGRS45;Dbxref=GO:0005576,GO:0005886,GO:0016491,GO:0033650;gene=pE_PGRS45;Parent=GCA000153685_02750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938541.1,SO:0001217,UniParc:UPI0000165306,UniRef:UniRef100_Q79FC3,UniRef:UniRef50_Q79FC3,UniRef:UniRef90_Q79FC3
contig_1	Pyrodigal	gene	2940590	2941090	.	+	.	ID=GCA000153685_02751_gene;locus_tag=GCA000153685_02751
contig_1	Pyrodigal	CDS	2940590	2941090	.	+	0	ID=GCA000153685_02751;Name=DUF1990 domain-containing protein;locus_tag=GCA000153685_02751;product=DUF1990 domain-containing protein;Parent=GCA000153685_02751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413569.1,SO:0001217,UniParc:UPI00000CCAF4,UniRef:UniRef100_O06198,UniRef:UniRef50_A0A1E3TEL0,UniRef:UniRef90_Q7D6W3
contig_1	Pyrodigal	gene	2941107	2941547	.	-	.	ID=GCA000153685_02752_gene;locus_tag=GCA000153685_02752
contig_1	Pyrodigal	CDS	2941107	2941547	.	-	0	ID=GCA000153685_02752;Name=Transmembrane protein;locus_tag=GCA000153685_02752;product=Transmembrane protein;Parent=GCA000153685_02752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413574.1,SO:0001217,UniParc:UPI00000D0F3B,UniRef:UniRef100_A5U5W8,UniRef:UniRef50_A0A1H1LQ82,UniRef:UniRef90_A0A0H3LDG1
contig_1	Pyrodigal	gene	2941643	2942371	.	+	.	ID=GCA000153685_02753_gene;locus_tag=GCA000153685_02753
contig_1	Pyrodigal	CDS	2941643	2942371	.	+	0	ID=GCA000153685_02753;Name=Transcriptional regulator;locus_tag=GCA000153685_02753;product=Transcriptional regulator;Parent=GCA000153685_02753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902320.1,SO:0001217,UniParc:UPI00005EE705,UniRef:UniRef100_A0A0H3LJ82,UniRef:UniRef50_O06195,UniRef:UniRef90_O06195
contig_1	Pyrodigal	gene	2942356	2942709	.	-	.	ID=GCA000153685_02754_gene;locus_tag=GCA000153685_02754;gene=luxR
contig_1	Pyrodigal	CDS	2942356	2942709	.	-	0	ID=GCA000153685_02754;Name=LuxR family transcriptional regulator;locus_tag=GCA000153685_02754;product=LuxR family transcriptional regulator;gene=luxR;Parent=GCA000153685_02754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413583.1,SO:0001217,UniParc:UPI00000C14C8,UniRef:UniRef100_O06194,UniRef:UniRef50_G8RYC6,UniRef:UniRef90_A0A2I7WA48
contig_1	Pyrodigal	gene	2942722	2943147	.	-	.	ID=GCA000153685_02755_gene;locus_tag=GCA000153685_02755
contig_1	Pyrodigal	CDS	2942722	2943147	.	-	0	ID=GCA000153685_02755;Name=Conserved transmembrane protein;locus_tag=GCA000153685_02755;product=Conserved transmembrane protein;Parent=GCA000153685_02755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413586.1,SO:0001217,UniParc:UPI00000D0F2F,UniRef:UniRef100_A5U5X1,UniRef:UniRef50_A0A1I3ARW9,UniRef:UniRef90_A5U5X1
contig_1	Pyrodigal	gene	2943144	2943818	.	-	.	ID=GCA000153685_02756_gene;locus_tag=GCA000153685_02756
contig_1	Pyrodigal	CDS	2943144	2943818	.	-	0	ID=GCA000153685_02756;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_02756;product=putative transcriptional regulatory protein;Parent=GCA000153685_02756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900535.1,SO:0001217,UniParc:UPI0001278108,UniRef:UniRef100_UPI0001278108,UniRef:UniRef50_A0A9P3Q4I3,UniRef:UniRef90_I6Y187
contig_1	Pyrodigal	gene	2943896	2944717	.	+	.	ID=GCA000153685_02757_gene;locus_tag=GCA000153685_02757
contig_1	Pyrodigal	CDS	2943896	2944717	.	+	0	ID=GCA000153685_02757;Name=putative methyltransferase (Methylase);locus_tag=GCA000153685_02757;product=putative methyltransferase (Methylase);Parent=GCA000153685_02757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413589.1,SO:0001217,UniParc:UPI0000031931,UniRef:UniRef100_I6XES4,UniRef:UniRef50_A0A1X1R5H9,UniRef:UniRef90_I6XES4
contig_1	Pyrodigal	gene	2944853	2945746	.	+	.	ID=GCA000153685_02758_gene;locus_tag=GCA000153685_02758
contig_1	Pyrodigal	CDS	2944853	2945746	.	+	0	ID=GCA000153685_02758;Name=universal stress protein TB31-7;locus_tag=GCA000153685_02758;product=universal stress protein TB31-7;Dbxref=GO:0001666,GO:0005524,GO:0005829,GO:0005886,GO:0009274,GO:0040008,GO:0085014;Parent=GCA000153685_02758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413592,RefSeq:WP_003413592.1,SO:0001217,UniParc:UPI000003326C,UniRef:UniRef100_P9WFD7,UniRef:UniRef50_P9WFD7,UniRef:UniRef90_P9WFD7
contig_1	Pyrodigal	gene	2945749	2946543	.	-	.	ID=GCA000153685_02759_gene;locus_tag=GCA000153685_02759
contig_1	Pyrodigal	CDS	2945749	2946543	.	-	0	ID=GCA000153685_02759;Name=Universal stress protein Rv2624c;locus_tag=GCA000153685_02759;product=Universal stress protein Rv2624c;Dbxref=GO:0005524,GO:0005886;Parent=GCA000153685_02759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899400.1,SO:0001217,UniParc:UPI00005EE706,UniRef:UniRef100_P9WFD5,UniRef:UniRef50_P9WFD5,UniRef:UniRef90_P9WFD5
contig_1	Pyrodigal	gene	2946582	2947763	.	-	.	ID=GCA000153685_02760_gene;locus_tag=GCA000153685_02760;gene=rip3
contig_1	Pyrodigal	CDS	2946582	2947763	.	-	0	ID=GCA000153685_02760;Name=Putative zinc metalloprotease Rip3;locus_tag=GCA000153685_02760;product=Putative zinc metalloprotease Rip3;Dbxref=GO:0005886,GO:0006508,GO:0008237,GO:0009274,GO:0046872;gene=rip3;Parent=GCA000153685_02760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06402,RefSeq:WP_003899401.1,SO:0001217,UniParc:UPI00000D1035,UniRef:UniRef100_P9WHR1,UniRef:UniRef50_P9WHR1,UniRef:UniRef90_P9WHR1;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	2947822	2948253	.	-	.	ID=GCA000153685_02761_gene;locus_tag=GCA000153685_02761;gene=hrp1
contig_1	Pyrodigal	CDS	2947822	2948253	.	-	0	ID=GCA000153685_02761;Name=hypoxic response protein Hrp1;locus_tag=GCA000153685_02761;product=hypoxic response protein Hrp1;Dbxref=GO:0001666,GO:0005576,GO:0005829,GO:0005886,GO:0009274,GO:0046872,GO:0052553,GO:0052572;gene=hrp1;Parent=GCA000153685_02761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413598,RefSeq:WP_003413598.1,SO:0001217,UniParc:UPI000004A4C0,UniRef:UniRef100_P9WJA3,UniRef:UniRef50_P9WJA3,UniRef:UniRef90_P9WJA3
contig_1	Pyrodigal	gene	2948767	2949933	.	-	.	ID=GCA000153685_02762_gene;locus_tag=GCA000153685_02762
contig_1	Pyrodigal	CDS	2948767	2949933	.	-	0	ID=GCA000153685_02762;Name=putative protein Rv2627c;locus_tag=GCA000153685_02762;product=putative protein Rv2627c;Dbxref=GO:0005886;Parent=GCA000153685_02762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911936.1,SO:0001217,UniParc:UPI00005EE707,UniRef:UniRef100_P9WL66,UniRef:UniRef50_P9WL67,UniRef:UniRef90_P9WL67
contig_1	Pyrodigal	gene	2950426	2950680	.	+	.	ID=GCA000153685_02763_gene;locus_tag=GCA000153685_02763
contig_1	Pyrodigal	CDS	2950426	2950680	.	+	0	ID=GCA000153685_02763;Name=hypothetical protein;locus_tag=GCA000153685_02763;product=hypothetical protein;Parent=GCA000153685_02763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_023637464.1,SO:0001217,UniParc:UPI0002E40A03,UniRef:UniRef100_A0A0E8XAW6,UniRef:UniRef50_A0A0E8XAW6,UniRef:UniRef90_A0A0E8XAW6
contig_1	Pyrodigal	gene	2951027	2952151	.	+	.	ID=GCA000153685_02764_gene;locus_tag=GCA000153685_02764
contig_1	Pyrodigal	CDS	2951027	2952151	.	+	0	ID=GCA000153685_02764;Name=putative protein Rv2629;locus_tag=GCA000153685_02764;product=putative protein Rv2629;Dbxref=GO:0001666,GO:0005829,GO:0005886,GO:0009274;Parent=GCA000153685_02764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413610.1,SO:0001217,UniParc:UPI00000D0F9E,UniRef:UniRef100_P9WL63,UniRef:UniRef50_P9WL63,UniRef:UniRef90_P9WL63
contig_1	Pyrodigal	gene	2952300	2952692	.	+	.	ID=GCA000153685_02765_gene;locus_tag=GCA000153685_02765
contig_1	Pyrodigal	CDS	2952300	2952692	.	+	0	ID=GCA000153685_02765;Name=Archease domain-containing protein;locus_tag=GCA000153685_02765;product=Archease domain-containing protein;Parent=GCA000153685_02765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K24956,SO:0001217,UniParc:UPI00005EE70A,UniRef:UniRef100_A0A0E8V9K0,UniRef:UniRef50_A0A0H3LCC2,UniRef:UniRef90_A0A0H3LCC2
contig_1	Pyrodigal	gene	2952832	2954130	.	+	.	ID=GCA000153685_02766_gene;locus_tag=GCA000153685_02766;gene=rtcB
contig_1	Pyrodigal	CDS	2952832	2954130	.	+	0	ID=GCA000153685_02766;Name=RNA-splicing ligase RtcB;locus_tag=GCA000153685_02766;product=RNA-splicing ligase RtcB;Dbxref=GO:0005525,GO:0005576,GO:0006388,GO:0009274,GO:0042245,GO:0046872,GO:0170057;gene=rtcB;Parent=GCA000153685_02766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_017351416,SO:0001217,UniParc:UPI000013BE90,UniRef:UniRef100_P9WGW4,UniRef:UniRef50_P9WGW5,UniRef:UniRef90_P9WGW5;ec_number=6.5.1.8
contig_1	Pyrodigal	gene	2954169	2954450	.	-	.	ID=GCA000153685_02767_gene;locus_tag=GCA000153685_02767
contig_1	Pyrodigal	CDS	2954169	2954450	.	-	0	ID=GCA000153685_02767;Name=putative protein Mb2665c;locus_tag=GCA000153685_02767;product=putative protein Mb2665c;Parent=GCA000153685_02767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413619.1,SO:0001217,UniParc:UPI000013BE93,UniRef:UniRef100_P9WL61,UniRef:UniRef50_P9WL61,UniRef:UniRef90_P9WL61
contig_1	Pyrodigal	gene	2954595	2955080	.	-	.	ID=GCA000153685_02768_gene;locus_tag=GCA000153685_02768
contig_1	Pyrodigal	CDS	2954595	2955080	.	-	0	ID=GCA000153685_02768;Name=non-heme di-iron catalase;locus_tag=GCA000153685_02768;product=non-heme di-iron catalase;Parent=GCA000153685_02768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413625,RefSeq:WP_003413625.1,SO:0001217,UniParc:UPI000013BE96,UniRef:UniRef100_P9WL59,UniRef:UniRef50_P9WL59,UniRef:UniRef90_P9WL59
contig_1	Pyrodigal	gene	2955107	2955361	.	-	.	ID=GCA000153685_02769_gene;locus_tag=GCA000153685_02769
contig_1	Pyrodigal	CDS	2955107	2955361	.	-	0	ID=GCA000153685_02769;Name=hypothetical protein;locus_tag=GCA000153685_02769;product=hypothetical protein;Parent=GCA000153685_02769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908019.1,SO:0001217,UniParc:UPI00015340A4,UniRef:UniRef100_A5U5Y5,UniRef:UniRef50_Q8VJF0,UniRef:UniRef90_Q8VJF0
contig_1	Pyrodigal	gene	2955365	2957701	.	-	.	ID=GCA000153685_02770_gene;locus_tag=GCA000153685_02770;gene=pE_PGRS46
contig_1	Pyrodigal	CDS	2955365	2957701	.	-	0	ID=GCA000153685_02770;Name=putative PE-PGRS family protein PE_PGRS46;locus_tag=GCA000153685_02770;product=putative PE-PGRS family protein PE_PGRS46;gene=pE_PGRS46;Parent=GCA000153685_02770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938544.1,SO:0001217,UniParc:UPI000013BE97,UniRef:UniRef100_P9WIE7,UniRef:UniRef50_P9WIE6,UniRef:UniRef90_P9WIE6
contig_1	Pyrodigal	gene	2958021	2958650	.	+	.	ID=GCA000153685_02771_gene;locus_tag=GCA000153685_02771
contig_1	Pyrodigal	CDS	2958021	2958650	.	+	0	ID=GCA000153685_02771;Name=Putative O-phosphotransferase Rv2636;locus_tag=GCA000153685_02771;product=Putative O-phosphotransferase Rv2636;Dbxref=GO:0005524,GO:0016740;Parent=GCA000153685_02771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911942.1,SO:0001217,UniParc:UPI00005EE70D,UniRef:UniRef100_P9WL55,UniRef:UniRef50_P9WL55,UniRef:UniRef90_P9WL55;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2958846	2959502	.	+	.	ID=GCA000153685_02772_gene;locus_tag=GCA000153685_02772
contig_1	Pyrodigal	CDS	2958846	2959502	.	+	0	ID=GCA000153685_02772;Name=putative membrane protein Mb2670;locus_tag=GCA000153685_02772;product=putative membrane protein Mb2670;Dbxref=GO:0005886;Parent=GCA000153685_02772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03975,RefSeq:WP_003413654.1,SO:0001217,UniParc:UPI000013BE9F,UniRef:UniRef100_P9WP07,UniRef:UniRef50_Q49642,UniRef:UniRef90_P9WP07
contig_1	Pyrodigal	gene	2959665	2960111	.	+	.	ID=GCA000153685_02773_gene;locus_tag=GCA000153685_02773
contig_1	Pyrodigal	CDS	2959665	2960111	.	+	0	ID=GCA000153685_02773;Name=Putative anti-anti-sigma factor Rv2638;locus_tag=GCA000153685_02773;product=Putative anti-anti-sigma factor Rv2638;Dbxref=GO:0043856;Parent=GCA000153685_02773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413657.1,SO:0001217,UniParc:UPI00000D605D,UniRef:UniRef100_I6X4W0,UniRef:UniRef50_I6X4W0,UniRef:UniRef90_I6X4W0
contig_1	Pyrodigal	gene	2960286	2960618	.	-	.	ID=GCA000153685_02774_gene;locus_tag=GCA000153685_02774;gene=ynfA
contig_1	Pyrodigal	CDS	2960286	2960618	.	-	0	ID=GCA000153685_02774;Name=YnfA family protein;locus_tag=GCA000153685_02774;product=YnfA family protein;Dbxref=GO:0005886,GO:0016020;gene=ynfA;Parent=GCA000153685_02774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09771,RefSeq:WP_003413663.1,SO:0001217,UniParc:UPI000013BEA3,UniRef:UniRef100_P9WFN9,UniRef:UniRef50_P9WFN9,UniRef:UniRef90_P9WFN9
contig_1	Pyrodigal	gene	2960738	2961097	.	-	.	ID=GCA000153685_02775_gene;locus_tag=GCA000153685_02775
contig_1	Pyrodigal	CDS	2960738	2961097	.	-	0	ID=GCA000153685_02775;Name=Rv2640c family ArsR-like transcriptional regulator;locus_tag=GCA000153685_02775;product=Rv2640c family ArsR-like transcriptional regulator;Parent=GCA000153685_02775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413665.1,SO:0001217,UniParc:UPI00000D11FD,UniRef:UniRef100_I6Y1A7,UniRef:UniRef50_A0A6N7CQR2,UniRef:UniRef90_I6Y1A7
contig_1	Pyrodigal	gene	2961199	2961657	.	+	.	ID=GCA000153685_02776_gene;locus_tag=GCA000153685_02776;gene=cadI
contig_1	Pyrodigal	CDS	2961199	2961657	.	+	0	ID=GCA000153685_02776;Name=ArsI/CadI family heavy metal resistance metalloenzyme;locus_tag=GCA000153685_02776;product=ArsI/CadI family heavy metal resistance metalloenzyme;Dbxref=GO:0046686;gene=cadI;Parent=GCA000153685_02776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413675.1,SO:0001217,UniParc:UPI000013BEA8,UniRef:UniRef100_P9WIR5,UniRef:UniRef50_P9WIR5,UniRef:UniRef90_P9WIR5
contig_1	Pyrodigal	gene	2961793	2962173	.	+	.	ID=GCA000153685_02777_gene;locus_tag=GCA000153685_02777
contig_1	Pyrodigal	CDS	2961793	2962173	.	+	0	ID=GCA000153685_02777;Name=putative transcriptional regulatory protein (Probably ArsR-family);locus_tag=GCA000153685_02777;product=putative transcriptional regulatory protein (Probably ArsR-family);Parent=GCA000153685_02777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899407.1,SO:0001217,UniParc:UPI00000D46FE,UniRef:UniRef100_P71941,UniRef:UniRef50_A0A3S4VHH7,UniRef:UniRef90_P71941
contig_1	Pyrodigal	gene	2962170	2963666	.	+	.	ID=GCA000153685_02778_gene;locus_tag=GCA000153685_02778;gene=arsB
contig_1	Pyrodigal	CDS	2962170	2963666	.	+	0	ID=GCA000153685_02778;Name=ACR3 family arsenite efflux transporter;locus_tag=GCA000153685_02778;product=ACR3 family arsenite efflux transporter;Dbxref=GO:0008490,GO:0015103,GO:0015297,GO:0015700,GO:0016020,GO:0046685;gene=arsB;Parent=GCA000153685_02778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03325,RefSeq:WP_003413686.1,SO:0001217,UniParc:UPI00000D11ED,UniRef:UniRef100_A5U5Z5,UniRef:UniRef50_A0A3S4CAV1,UniRef:UniRef90_A5U5Z5
contig_1	Pyrodigal	gene	2963901	2964092	.	+	.	ID=GCA000153685_02779_gene;locus_tag=GCA000153685_02779;gene=mazE
contig_1	Pyrodigal	CDS	2963901	2964092	.	+	0	ID=GCA000153685_02779;Name=Antitoxin MazE;locus_tag=GCA000153685_02779;product=Antitoxin MazE;gene=mazE;Parent=GCA000153685_02779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912823.1,SO:0001217,UniParc:UPI000190105E,UniRef:UniRef100_A0A0H3LJA8,UniRef:UniRef50_A0A0H3LJA8,UniRef:UniRef90_A0A0H3LJA8
contig_1	tRNAscan-SE	gene	2964757	2964828	.	-	.	ID=GCA000153685_02780_gene;locus_tag=GCA000153685_02780;gene=trnV
contig_1	tRNAscan-SE	tRNA	2964757	2964828	.	-	.	ID=GCA000153685_02780;Name=tRNA-Val(cac);locus_tag=GCA000153685_02780;product=tRNA-Val(cac);gene=trnV;anti_codon=cac;amino_acid=Val;Parent=GCA000153685_02780_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2965013	2965085	.	+	.	ID=GCA000153685_02781_gene;locus_tag=GCA000153685_02781;gene=trnG
contig_1	tRNAscan-SE	tRNA	2965013	2965085	.	+	.	ID=GCA000153685_02781;Name=tRNA-Gly(gcc);locus_tag=GCA000153685_02781;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000153685_02781_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2965115	2965188	.	+	.	ID=GCA000153685_02782_gene;locus_tag=GCA000153685_02782;gene=trnC
contig_1	tRNAscan-SE	tRNA	2965115	2965188	.	+	.	ID=GCA000153685_02782;Name=tRNA-Cys(gca);locus_tag=GCA000153685_02782;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000153685_02782_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	2965202	2965276	.	+	.	ID=GCA000153685_02783_gene;locus_tag=GCA000153685_02783;gene=trnV
contig_1	tRNAscan-SE	tRNA	2965202	2965276	.	+	.	ID=GCA000153685_02783;Name=tRNA-Val(gac);locus_tag=GCA000153685_02783;product=tRNA-Val(gac);gene=trnV;anti_codon=gac;amino_acid=Val;Parent=GCA000153685_02783_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Pyrodigal	gene	2965383	2965814	.	+	.	ID=GCA000153685_02784_gene;locus_tag=GCA000153685_02784
contig_1	Pyrodigal	CDS	2965383	2965814	.	+	0	ID=GCA000153685_02784;Name=putative protein Rv2645;locus_tag=GCA000153685_02784;product=putative protein Rv2645;Parent=GCA000153685_02784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899409.1,SO:0001217,UniParc:UPI000013BEAD,UniRef:UniRef100_P9WL51,UniRef:UniRef50_P9WL51,UniRef:UniRef90_P9WL51
contig_1	Pyrodigal	gene	2965811	2966809	.	+	.	ID=GCA000153685_02785_gene;locus_tag=GCA000153685_02785
contig_1	Pyrodigal	CDS	2965811	2966809	.	+	0	ID=GCA000153685_02785;Name=Integrase;locus_tag=GCA000153685_02785;product=Integrase;Parent=GCA000153685_02785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900538.1,SO:0001217,UniParc:UPI00000D1207,UniRef:UniRef100_A5U5Z8,UniRef:UniRef50_R4M9Q1,UniRef:UniRef90_A0A655AI80
contig_1	Pyrodigal	gene	2966919	2967287	.	+	.	ID=GCA000153685_02786_gene;locus_tag=GCA000153685_02786
contig_1	Pyrodigal	CDS	2966919	2967287	.	+	0	ID=GCA000153685_02786;Name=hypothetical protein;locus_tag=GCA000153685_02786;product=hypothetical protein;Parent=GCA000153685_02786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D122D,UniRef:UniRef100_I6YDZ2,UniRef:UniRef50_I6YDZ2,UniRef:UniRef90_I6YDZ2
contig_1	Pyrodigal	gene	2967254	2967454	.	-	.	ID=GCA000153685_02787_gene;locus_tag=GCA000153685_02787
contig_1	Pyrodigal	CDS	2967254	2967454	.	-	0	ID=GCA000153685_02787;Name=hypothetical protein;locus_tag=GCA000153685_02787;product=hypothetical protein;Parent=GCA000153685_02787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002D63ABC,UniRef:UniRef100_A0A0E8UP35,UniRef:UniRef50_A0A0H3LJB2,UniRef:UniRef90_A0A0H3LJB2
contig_1	Pyrodigal	gene	2967697	2969136	.	-	.	ID=GCA000153685_02788_gene;locus_tag=GCA000153685_02788
contig_1	Pyrodigal	CDS	2967697	2969136	.	-	0	ID=GCA000153685_02788;Name=phage major capsid protein;locus_tag=GCA000153685_02788;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000153685_02788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899411.1,SO:0001217,UniParc:UPI0000165123,UniRef:UniRef100_A0A0H3LCF5,UniRef:UniRef50_P71947,UniRef:UniRef90_P71947
contig_1	Pyrodigal	gene	2969144	2969677	.	-	.	ID=GCA000153685_02789_gene;locus_tag=GCA000153685_02789
contig_1	Pyrodigal	CDS	2969144	2969677	.	-	0	ID=GCA000153685_02789;Name=HK97 family phage prohead protease;locus_tag=GCA000153685_02789;product=HK97 family phage prohead protease;Dbxref=GO:0005198,GO:0008233,GO:0019068,GO:0019082;Parent=GCA000153685_02789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899412.1,SO:0001217,UniParc:UPI00000D123E,UniRef:UniRef100_I6XEX3,UniRef:UniRef50_A0A0H3LCI4,UniRef:UniRef90_A0A0H3LCI4
contig_1	Pyrodigal	gene	2969830	2970321	.	-	.	ID=GCA000153685_02790_gene;locus_tag=GCA000153685_02790
contig_1	Pyrodigal	CDS	2969830	2970321	.	-	0	ID=GCA000153685_02790;Name=phage terminase small subunit P27 family;locus_tag=GCA000153685_02790;product=phage terminase small subunit P27 family;Parent=GCA000153685_02790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900541.1,SO:0001217,UniParc:UPI0000165124,UniRef:UniRef100_Q7D6U2,UniRef:UniRef50_Q7D6U2,UniRef:UniRef90_Q7D6U2
contig_1	Pyrodigal	gene	2970488	2970811	.	-	.	ID=GCA000153685_02791_gene;locus_tag=GCA000153685_02791
contig_1	Pyrodigal	CDS	2970488	2970811	.	-	0	ID=GCA000153685_02791;Name=type II toxin-antitoxin system toxin;locus_tag=GCA000153685_02791;product=type II toxin-antitoxin system toxin;Dbxref=GO:0045926;Parent=GCA000153685_02791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899414,RefSeq:WP_003899414.1,SO:0001217,UniParc:UPI0000036DD9,UniRef:UniRef100_P9WJ13,UniRef:UniRef50_P9WJ13,UniRef:UniRef90_P9WJ13
contig_1	Pyrodigal	gene	2970891	2971136	.	-	.	ID=GCA000153685_02792_gene;locus_tag=GCA000153685_02792
contig_1	Pyrodigal	CDS	2970891	2971136	.	-	0	ID=GCA000153685_02792;Name=type II toxin-antitoxin system antitoxin;locus_tag=GCA000153685_02792;product=type II toxin-antitoxin system antitoxin;Dbxref=GO:0045927;Parent=GCA000153685_02792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899415,RefSeq:WP_003899415.1,SO:0001217,UniParc:UPI0000036DDA,UniRef:UniRef100_P9WJ11,UniRef:UniRef50_P9WJ11,UniRef:UniRef90_P9WJ11
contig_1	Pyrodigal	gene	2971133	2972560	.	-	.	ID=GCA000153685_02793_gene;locus_tag=GCA000153685_02793
contig_1	Pyrodigal	CDS	2971133	2972560	.	-	0	ID=GCA000153685_02793;Name=DUF3631 domain-containing protein;locus_tag=GCA000153685_02793;product=DUF3631 domain-containing protein;Parent=GCA000153685_02793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899416.1,SO:0001217,UniParc:UPI00000D1230,UniRef:UniRef100_I6Y1F0,UniRef:UniRef50_A0A7I7YAJ5,UniRef:UniRef90_R4M516
contig_1	Pyrodigal	gene	2972562	2972954	.	-	.	ID=GCA000153685_02794_gene;locus_tag=GCA000153685_02794
contig_1	Pyrodigal	CDS	2972562	2972954	.	-	0	ID=GCA000153685_02794;Name=putative protein Rv2656c;locus_tag=GCA000153685_02794;product=putative protein Rv2656c;Parent=GCA000153685_02794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899417.1,SO:0001217,UniParc:UPI000013BEB3,UniRef:UniRef100_P9WL49,UniRef:UniRef50_P9WL49,UniRef:UniRef90_P9WL49
contig_1	Pyrodigal	gene	2972951	2973148	.	-	.	ID=GCA000153685_02795_gene;locus_tag=GCA000153685_02795
contig_1	Pyrodigal	CDS	2972951	2973148	.	-	0	ID=GCA000153685_02795;Name=PhiRv2 prophage protein;locus_tag=GCA000153685_02795;product=PhiRv2 prophage protein;Parent=GCA000153685_02795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911962.1,SO:0001217,UniParc:UPI00005EE715,UniRef:UniRef100_A0A0H3LGI5,UniRef:UniRef50_A5U610,UniRef:UniRef90_A5U610
contig_1	Pyrodigal	gene	2973228	2973593	.	-	.	ID=GCA000153685_02796_gene;locus_tag=GCA000153685_02796
contig_1	Pyrodigal	CDS	2973228	2973593	.	-	0	ID=GCA000153685_02796;Name=putative protein Rv2658c;locus_tag=GCA000153685_02796;product=putative protein Rv2658c;Parent=GCA000153685_02796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE716,UniRef:UniRef100_P9WL47,UniRef:UniRef50_P9WL47,UniRef:UniRef90_P9WL47
contig_1	Pyrodigal	gene	2973593	2974720	.	-	.	ID=GCA000153685_02797_gene;locus_tag=GCA000153685_02797
contig_1	Pyrodigal	CDS	2973593	2974720	.	-	0	ID=GCA000153685_02797;Name=Putative prophage phiRv2 integrase;locus_tag=GCA000153685_02797;product=Putative prophage phiRv2 integrase;Dbxref=GO:0003677,GO:0006310,GO:0015074,GO:0044826,GO:0046718,GO:0075713;Parent=GCA000153685_02797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899420.1,SO:0001217,UniParc:UPI00000CCC24,UniRef:UniRef100_P9WMB3,UniRef:UniRef50_P9WMB3,UniRef:UniRef90_P9WMB3
contig_1	Infernal	gene	2974813	2974984	.	+	.	ID=GCA000153685_02798_gene;locus_tag=GCA000153685_02798;gene=ncRv12659
contig_1	Infernal	ncRNA	2974813	2974984	1.6e-36	+	.	ID=GCA000153685_02798;Name=ncRv12659 sRNA;locus_tag=GCA000153685_02798;product=ncRv12659 sRNA;Dbxref=RFAM:RF02659;Parent=GCA000153685_02798_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02659
contig_1	Pyrodigal	gene	2975233	2975391	.	+	.	ID=GCA000153685_02799_gene;locus_tag=GCA000153685_02799
contig_1	Pyrodigal	CDS	2975233	2975391	.	+	0	ID=GCA000153685_02799;Name=hypothetical protein;locus_tag=GCA000153685_02799;product=hypothetical protein;Parent=GCA000153685_02799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D02,UniRef:UniRef100_A0A0H3LCG7,UniRef:UniRef50_A0A0H3LCG7,UniRef:UniRef90_A0A0H3LCG7
contig_1	Pyrodigal	gene	2975755	2975988	.	+	.	ID=GCA000153685_02800_gene;locus_tag=GCA000153685_02800
contig_1	Pyrodigal	CDS	2975755	2975988	.	+	0	ID=GCA000153685_02800;Name=Toxin;locus_tag=GCA000153685_02800;product=Toxin;Parent=GCA000153685_02800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413717.1,SO:0001217,UniParc:UPI00000D1030,UniRef:UniRef100_I6X520,UniRef:UniRef50_I6X520,UniRef:UniRef90_I6X520
contig_1	Pyrodigal	gene	2975999	2976253	.	+	.	ID=GCA000153685_02801_gene;locus_tag=GCA000153685_02801
contig_1	Pyrodigal	CDS	2975999	2976253	.	+	0	ID=GCA000153685_02801;Name=Transcriptional regulator;locus_tag=GCA000153685_02801;product=Transcriptional regulator;Parent=GCA000153685_02801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413719.1,SO:0001217,UniParc:UPI00000D0FEB,UniRef:UniRef100_I6Y9Z5,UniRef:UniRef50_A0A542E340,UniRef:UniRef90_A0A2I7WAV4
contig_1	Pyrodigal	gene	2976601	2976903	.	+	.	ID=GCA000153685_02802_gene;locus_tag=GCA000153685_02802
contig_1	Pyrodigal	CDS	2976601	2976903	.	+	0	ID=GCA000153685_02802;Name=Arginine RICH protein;locus_tag=GCA000153685_02802;product=Arginine RICH protein;Parent=GCA000153685_02802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A44D,UniRef:UniRef100_A0A0H3LDJ1,UniRef:UniRef50_P71962,UniRef:UniRef90_A0A0H3LDJ1
contig_1	Pyrodigal	gene	2976974	2977777	.	+	.	ID=GCA000153685_02803_gene;locus_tag=GCA000153685_02803;gene=tnp
contig_1	Pyrodigal	CDS	2976974	2977777	.	+	0	ID=GCA000153685_02803;Name=IS256 family transposase;locus_tag=GCA000153685_02803;product=IS256 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_02803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000C11D6,UniRef:UniRef100_P71963,UniRef:UniRef50_S5SRA5,UniRef:UniRef90_P71963
contig_1	Pyrodigal	gene	2977799	2978557	.	+	.	ID=GCA000153685_02804_gene;locus_tag=GCA000153685_02804
contig_1	Pyrodigal	CDS	2977799	2978557	.	+	0	ID=GCA000153685_02804;Name=putative protein Rv2667;locus_tag=GCA000153685_02804;product=putative protein Rv2667;Dbxref=GO:0005829;Parent=GCA000153685_02804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413845.1,SO:0001217,UniParc:UPI000013BEBB,UniRef:UniRef100_P9WPC7,UniRef:UniRef50_P9WPC7,UniRef:UniRef90_P9WPC7
contig_1	Pyrodigal	gene	2978636	2979157	.	+	.	ID=GCA000153685_02805_gene;locus_tag=GCA000153685_02805
contig_1	Pyrodigal	CDS	2978636	2979157	.	+	0	ID=GCA000153685_02805;Name=Alanine and valine rich exported protein;locus_tag=GCA000153685_02805;product=Alanine and valine rich exported protein;Parent=GCA000153685_02805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899425.1,SO:0001217,UniParc:UPI00005EE718,UniRef:UniRef100_A0A0H3LCJ7,UniRef:UniRef50_I2AGD2,UniRef:UniRef90_A0A0H3LCJ7
contig_1	Pyrodigal	gene	2979186	2979656	.	+	.	ID=GCA000153685_02806_gene;locus_tag=GCA000153685_02806
contig_1	Pyrodigal	CDS	2979186	2979656	.	+	0	ID=GCA000153685_02806;Name=putative N-acetyltransferase Mb2688;locus_tag=GCA000153685_02806;product=putative N-acetyltransferase Mb2688;Dbxref=GO:0016747;Parent=GCA000153685_02806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413852.1,SO:0001217,UniParc:UPI000013BEBC,UniRef:UniRef100_P9WQG5,UniRef:UniRef50_P9WQG5,UniRef:UniRef90_P9WQG5;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2979634	2980707	.	-	.	ID=GCA000153685_02807_gene;locus_tag=GCA000153685_02807;gene=zapE
contig_1	Pyrodigal	CDS	2979634	2980707	.	-	0	ID=GCA000153685_02807;Name=cell division protein ZapE;locus_tag=GCA000153685_02807;product=cell division protein ZapE;Dbxref=GO:0005524,GO:0016887,GO:0051301;gene=zapE;Parent=GCA000153685_02807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031727576.1,SO:0001217,UniParc:UPI000459B0F8,UniRef:UniRef100_I6Y1G3,UniRef:UniRef50_F5YVJ5,UniRef:UniRef90_I6Y1G3
contig_1	Pyrodigal	gene	2980742	2981518	.	+	.	ID=GCA000153685_02808_gene;locus_tag=GCA000153685_02808;gene=ribD
contig_1	Pyrodigal	CDS	2980742	2981518	.	+	0	ID=GCA000153685_02808;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;locus_tag=GCA000153685_02808;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;gene=ribD;Parent=GCA000153685_02808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413854,RefSeq:WP_003413854.1,SO:0001217,UniParc:UPI000004B727,UniRef:UniRef100_P71968,UniRef:UniRef50_P71968,UniRef:UniRef90_P71968
contig_1	Pyrodigal	gene	2981615	2983171	.	+	.	ID=GCA000153685_02809_gene;locus_tag=GCA000153685_02809
contig_1	Pyrodigal	CDS	2981615	2983171	.	+	0	ID=GCA000153685_02809;Name=putative secreted protease;locus_tag=GCA000153685_02809;product=putative secreted protease;Parent=GCA000153685_02809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165128,UniRef:UniRef100_P71969,UniRef:UniRef50_A0A391PHV6,UniRef:UniRef90_P71969
contig_1	Pyrodigal	gene	2983194	2984495	.	+	.	ID=GCA000153685_02810_gene;locus_tag=GCA000153685_02810;gene=aftC
contig_1	Pyrodigal	CDS	2983194	2984495	.	+	0	ID=GCA000153685_02810;Name=arabinofuranan 3-O-arabinosyltransferase;locus_tag=GCA000153685_02810;product=arabinofuranan 3-O-arabinosyltransferase;Dbxref=GO:0005886,GO:0016758,GO:0045227,GO:0071555;gene=aftC;Parent=GCA000153685_02810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413860,BlastRules:WP_011265835,BlastRules:WP_011728581,KEGG:K16647,RefSeq:WP_003413860.1,SO:0001217,UniParc:UPI00000D1223,UniRef:UniRef100_P9WMZ7,UniRef:UniRef50_P9WMZ7,UniRef:UniRef90_P9WMZ7;ec_number=2.4.2.47
contig_1	Pyrodigal	gene	2984664	2985074	.	+	.	ID=GCA000153685_02811_gene;locus_tag=GCA000153685_02811
contig_1	Pyrodigal	CDS	2984664	2985074	.	+	0	ID=GCA000153685_02811;Name=peptide-methionine (R)-S-oxide reductase;locus_tag=GCA000153685_02811;product=peptide-methionine (R)-S-oxide reductase;Parent=GCA000153685_02811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413865.1,SO:0001217,UniParc:UPI00000D1205,UniRef:UniRef100_I6YA00,UniRef:UniRef50_A0A1G8C5C9,UniRef:UniRef90_I6YA00
contig_1	Pyrodigal	gene	2985142	2985894	.	-	.	ID=GCA000153685_02812_gene;locus_tag=GCA000153685_02812
contig_1	Pyrodigal	CDS	2985142	2985894	.	-	0	ID=GCA000153685_02812;Name=Methyltransferase domain-containing protein;locus_tag=GCA000153685_02812;product=Methyltransferase domain-containing protein;Parent=GCA000153685_02812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413866.1,SO:0001217,UniParc:UPI00000D0FA4,UniRef:UniRef100_I6Y1G8,UniRef:UniRef50_A0A7I9Z724,UniRef:UniRef90_I6Y1G8
contig_1	Pyrodigal	gene	2985891	2986586	.	-	.	ID=GCA000153685_02813_gene;locus_tag=GCA000153685_02813;gene=hemQ
contig_1	Pyrodigal	CDS	2985891	2986586	.	-	0	ID=GCA000153685_02813;Name=hydrogen peroxide-dependent heme synthase;locus_tag=GCA000153685_02813;product=hydrogen peroxide-dependent heme synthase;Dbxref=GO:0005886,GO:0006785,GO:0016634,GO:0020037,GO:0046872;gene=hemQ;Parent=GCA000153685_02813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3253,COG:HP,RefSeq:WP_003413869.1,SO:0001217,UniParc:UPI00000D11DD,UniRef:UniRef100_P9WL45,UniRef:UniRef50_P9WL45,UniRef:UniRef90_P9WL45;ec_number=1.3.98.5
contig_1	Pyrodigal	gene	2986592	2987950	.	-	.	ID=GCA000153685_02814_gene;locus_tag=GCA000153685_02814;gene=cgoX
contig_1	Pyrodigal	CDS	2986592	2987950	.	-	0	ID=GCA000153685_02814;Name=protoporphyrinogen oxidase;locus_tag=GCA000153685_02814;product=protoporphyrinogen oxidase;Dbxref=GO:0004729,GO:0005737,GO:0006779,GO:0006783,GO:0016491;gene=cgoX;Parent=GCA000153685_02814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413871.1,SO:0001217,UniParc:UPI00001320EC,UniRef:UniRef100_P9WMP1,UniRef:UniRef50_P9WMP1,UniRef:UniRef90_P9WMP1;ec_number=1.3.3.4
contig_1	Pyrodigal	gene	2987947	2989065	.	-	.	ID=GCA000153685_02815_gene;locus_tag=GCA000153685_02815;gene=hemE
contig_1	Pyrodigal	CDS	2987947	2989065	.	-	0	ID=GCA000153685_02815;Name=uroporphyrinogen decarboxylase;locus_tag=GCA000153685_02815;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0005829,GO:0006779,GO:0006782;gene=hemE;Parent=GCA000153685_02815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01599,SO:0001217,UniParc:UPI0000165129,UniRef:UniRef100_P9WFE1,UniRef:UniRef50_P9WFE1,UniRef:UniRef90_P9WFE1;ec_number=4.1.1.37
contig_1	Pyrodigal	gene	2989073	2989903	.	+	.	ID=GCA000153685_02816_gene;locus_tag=GCA000153685_02816
contig_1	Pyrodigal	CDS	2989073	2989903	.	+	0	ID=GCA000153685_02816;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_02816;product=Enoyl-CoA hydratase;Parent=GCA000153685_02816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413876.1,SO:0001217,UniParc:UPI00000D5E2D,UniRef:UniRef100_A5U631,UniRef:UniRef50_D5PJS4,UniRef:UniRef90_A0A0T9E522
contig_1	Pyrodigal	gene	2989961	2990797	.	+	.	ID=GCA000153685_02817_gene;locus_tag=GCA000153685_02817
contig_1	Pyrodigal	CDS	2989961	2990797	.	+	0	ID=GCA000153685_02817;Name=DUF3000 domain-containing protein;locus_tag=GCA000153685_02817;product=DUF3000 domain-containing protein;Parent=GCA000153685_02817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D356,UniRef:UniRef100_A0A0H3LDM0,UniRef:UniRef50_A0A3G8JGS4,UniRef:UniRef90_A0A0H3LDM0
contig_1	Pyrodigal	gene	2990799	2992115	.	+	.	ID=GCA000153685_02818_gene;locus_tag=GCA000153685_02818
contig_1	Pyrodigal	CDS	2990799	2992115	.	+	0	ID=GCA000153685_02818;Name=Ribonuclease D (EC);locus_tag=GCA000153685_02818;product=Ribonuclease D (EC);Parent=GCA000153685_02818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03684,RefSeq:WP_003413889.1,SO:0001217,UniParc:UPI00000D5FFB,UniRef:UniRef100_A5U633,UniRef:UniRef50_A0A0N9XCX6,UniRef:UniRef90_A0A1R3Y2A8;ec_number=3.1.13.5
contig_1	Pyrodigal	gene	2992112	2994028	.	-	.	ID=GCA000153685_02819_gene;locus_tag=GCA000153685_02819;gene=dxs
contig_1	Pyrodigal	CDS	2992112	2994028	.	-	0	ID=GCA000153685_02819;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA000153685_02819;product=1-deoxy-D-xylulose-5-phosphate synthase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0008615,GO:0008661,GO:0009228,GO:0009240,GO:0010628,GO:0016114,GO:0019288,GO:0030145,GO:0030975,GO:0030976,GO:0052865;gene=dxs;Parent=GCA000153685_02819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01662,RefSeq:WP_003413891.1,SO:0001217,UniParc:UPI00001299E8,UniRef:UniRef100_P9WNS3,UniRef:UniRef50_P9WNS3,UniRef:UniRef90_P9WNS3;ec_number=2.2.1.7
contig_1	Pyrodigal	gene	2994172	2994669	.	+	.	ID=GCA000153685_02820_gene;locus_tag=GCA000153685_02820
contig_1	Pyrodigal	CDS	2994172	2994669	.	+	0	ID=GCA000153685_02820;Name=Conserved protein;locus_tag=GCA000153685_02820;product=Conserved protein;Parent=GCA000153685_02820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899429.1,SO:0001217,UniParc:UPI00000D5F3F,UniRef:UniRef100_I6X540,UniRef:UniRef50_Q7AQA5,UniRef:UniRef90_I6X540
contig_1	Pyrodigal	gene	2994674	2995963	.	+	.	ID=GCA000153685_02821_gene;locus_tag=GCA000153685_02821
contig_1	Pyrodigal	CDS	2994674	2995963	.	+	0	ID=GCA000153685_02821;Name=putative transporter Mb2703;locus_tag=GCA000153685_02821;product=putative transporter Mb2703;Dbxref=GO:0005886,GO:0015105;Parent=GCA000153685_02821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413894.1,SO:0001217,UniParc:UPI000013BEBF,UniRef:UniRef100_P9WPD9,UniRef:UniRef50_P46838,UniRef:UniRef90_P9WPD9
contig_1	Pyrodigal	gene	2996043	2997329	.	+	.	ID=GCA000153685_02822_gene;locus_tag=GCA000153685_02822
contig_1	Pyrodigal	CDS	2996043	2997329	.	+	0	ID=GCA000153685_02822;Name=putative transporter Rv2685;locus_tag=GCA000153685_02822;product=putative transporter Rv2685;Dbxref=GO:0005886,GO:0015105;Parent=GCA000153685_02822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899431.1,SO:0001217,UniParc:UPI000013BEC0,UniRef:UniRef100_P9WPD7,UniRef:UniRef50_P46838,UniRef:UniRef90_P9WPD7
contig_1	Pyrodigal	gene	2997340	2998098	.	-	.	ID=GCA000153685_02823_gene;locus_tag=GCA000153685_02823
contig_1	Pyrodigal	CDS	2997340	2998098	.	-	0	ID=GCA000153685_02823;Name=fluoroquinolones efflux ABC transporter permease;locus_tag=GCA000153685_02823;product=fluoroquinolones efflux ABC transporter permease;Dbxref=GO:0005886,GO:0015562,GO:0046677,GO:0055085;Parent=GCA000153685_02823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413897,KEGG:K16905,RefSeq:WP_003413897.1,SO:0001217,UniParc:UPI00000D1168,UniRef:UniRef100_P9WJB3,UniRef:UniRef50_P9WJB3,UniRef:UniRef90_P9WJB3
contig_1	Pyrodigal	gene	2998095	2998808	.	-	.	ID=GCA000153685_02824_gene;locus_tag=GCA000153685_02824
contig_1	Pyrodigal	CDS	2998095	2998808	.	-	0	ID=GCA000153685_02824;Name=Fluoroquinolones export permease protein Rv2687c;locus_tag=GCA000153685_02824;product=Fluoroquinolones export permease protein Rv2687c;Dbxref=GO:0005886,GO:0015562,GO:0046677,GO:0055085;Parent=GCA000153685_02824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413912.1,SO:0001217,UniParc:UPI00000D10D6,UniRef:UniRef100_P9WJB1,UniRef:UniRef50_P9WJB1,UniRef:UniRef90_P9WJB1
contig_1	Pyrodigal	gene	2998805	2999710	.	-	.	ID=GCA000153685_02825_gene;locus_tag=GCA000153685_02825
contig_1	Pyrodigal	CDS	2998805	2999710	.	-	0	ID=GCA000153685_02825;Name=Fluoroquinolones export ATP-binding protein Rv2688c;locus_tag=GCA000153685_02825;product=Fluoroquinolones export ATP-binding protein Rv2688c;Dbxref=GO:0005524,GO:0005886,GO:0015562,GO:0016887,GO:0022857,GO:0046677,GO:0055085,GO:1990961;Parent=GCA000153685_02825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413913.1,SO:0001217,UniParc:UPI00001A9140,UniRef:UniRef100_P9WQL6,UniRef:UniRef50_P9WQL7,UniRef:UniRef90_P9WQL7;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2999905	3001122	.	-	.	ID=GCA000153685_02826_gene;locus_tag=GCA000153685_02826
contig_1	Pyrodigal	CDS	2999905	3001122	.	-	0	ID=GCA000153685_02826;Name=TRAM domain-containing protein;locus_tag=GCA000153685_02826;product=TRAM domain-containing protein;Parent=GCA000153685_02826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900550.1,SO:0001217,UniParc:UPI000016530A,UniRef:UniRef100_O07191,UniRef:UniRef50_Q7D6R9,UniRef:UniRef90_Q7D6R9
contig_1	Pyrodigal	gene	3001296	3003386	.	-	.	ID=GCA000153685_02827_gene;locus_tag=GCA000153685_02827
contig_1	Pyrodigal	CDS	3001296	3003386	.	-	0	ID=GCA000153685_02827;Name=DNA-binding protein;locus_tag=GCA000153685_02827;product=DNA-binding protein;Parent=GCA000153685_02827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002D64243,UniRef:UniRef100_A0A0E8NUN4,UniRef:UniRef50_K0JY74,UniRef:UniRef90_A0A7I7NKY5
contig_1	Pyrodigal	gene	3003404	3004087	.	+	.	ID=GCA000153685_02828_gene;locus_tag=GCA000153685_02828;gene=trkA
contig_1	Pyrodigal	CDS	3003404	3004087	.	+	0	ID=GCA000153685_02828;Name=Trk system potassium uptake protein TrkA;locus_tag=GCA000153685_02828;product=Trk system potassium uptake protein TrkA;gene=trkA;Parent=GCA000153685_02828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_003413919.1,SO:0001217,UniParc:UPI000016512C,UniRef:UniRef100_A0A1R3Y2B8,UniRef:UniRef50_Q53949,UniRef:UniRef90_I6XF25
contig_1	Pyrodigal	gene	3004084	3004746	.	+	.	ID=GCA000153685_02829_gene;locus_tag=GCA000153685_02829;gene=trkA
contig_1	Pyrodigal	CDS	3004084	3004746	.	+	0	ID=GCA000153685_02829;Name=Trk system potassium uptake protein TrkA;locus_tag=GCA000153685_02829;product=Trk system potassium uptake protein TrkA;Dbxref=GO:0005886,GO:0006813,GO:0015079;gene=trkA;Parent=GCA000153685_02829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_003899435.1,SO:0001217,UniParc:UPI00001373C9,UniRef:UniRef100_P9WFZ3,UniRef:UniRef50_P9WFZ3,UniRef:UniRef90_P9WFZ3
contig_1	Pyrodigal	gene	3004757	3005428	.	-	.	ID=GCA000153685_02830_gene;locus_tag=GCA000153685_02830
contig_1	Pyrodigal	CDS	3004757	3005428	.	-	0	ID=GCA000153685_02830;Name=Conserved alanine and leucine rich integral membrane protein;locus_tag=GCA000153685_02830;product=Conserved alanine and leucine rich integral membrane protein;Parent=GCA000153685_02830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413925.1,SO:0001217,UniParc:UPI00000D0F51,UniRef:UniRef100_A5U645,UniRef:UniRef50_K0UB71,UniRef:UniRef90_A5U645
contig_1	Pyrodigal	gene	3005459	3005827	.	-	.	ID=GCA000153685_02831_gene;locus_tag=GCA000153685_02831
contig_1	Pyrodigal	CDS	3005459	3005827	.	-	0	ID=GCA000153685_02831;Name=DNA-binding protein;locus_tag=GCA000153685_02831;product=DNA-binding protein;Parent=GCA000153685_02831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345140.1,SO:0001217,UniParc:UPI000169A4D8,UniRef:UniRef100_A0A0H3LDN1,UniRef:UniRef50_D0LCI1,UniRef:UniRef90_A0A0H3LDN1
contig_1	Pyrodigal	gene	3005976	3006683	.	+	.	ID=GCA000153685_02832_gene;locus_tag=GCA000153685_02832
contig_1	Pyrodigal	CDS	3005976	3006683	.	+	0	ID=GCA000153685_02832;Name=putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily);locus_tag=GCA000153685_02832;product=putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily);Parent=GCA000153685_02832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413927.1,SO:0001217,UniParc:UPI00000D0F48,UniRef:UniRef100_A0A1R3Y1Y2,UniRef:UniRef50_A0A4P6UES0,UniRef:UniRef90_A0A1R3Y1Y2
contig_1	Pyrodigal	gene	3006889	3007668	.	-	.	ID=GCA000153685_02833_gene;locus_tag=GCA000153685_02833
contig_1	Pyrodigal	CDS	3006889	3007668	.	-	0	ID=GCA000153685_02833;Name=DUF3710 domain-containing protein;locus_tag=GCA000153685_02833;product=DUF3710 domain-containing protein;Parent=GCA000153685_02833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413928.1,SO:0001217,UniParc:UPI00000D113A,UniRef:UniRef100_I6XF31,UniRef:UniRef50_Q7AQA7,UniRef:UniRef90_R4MGU1
contig_1	Pyrodigal	gene	3007743	3008207	.	-	.	ID=GCA000153685_02834_gene;locus_tag=GCA000153685_02834;gene=dut
contig_1	Pyrodigal	CDS	3007743	3008207	.	-	0	ID=GCA000153685_02834;Name=dUTP diphosphatase;locus_tag=GCA000153685_02834;product=dUTP diphosphatase;Dbxref=GO:0000287,GO:0004170,GO:0006226,GO:0046081;gene=dut;Parent=GCA000153685_02834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0756,COG:FV,RefSeq:WP_003900552.1,SO:0001217,UniParc:UPI000127818A,UniRef:UniRef100_A0A0H3LCM5,UniRef:UniRef50_Q49992,UniRef:UniRef90_Q49992;ec_number=3.6.1.23
contig_1	Pyrodigal	gene	3008287	3008718	.	+	.	ID=GCA000153685_02835_gene;locus_tag=GCA000153685_02835
contig_1	Pyrodigal	CDS	3008287	3008718	.	+	0	ID=GCA000153685_02835;Name=Alanine rich transmembrane protein;locus_tag=GCA000153685_02835;product=Alanine rich transmembrane protein;Parent=GCA000153685_02835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A4D9,UniRef:UniRef100_A0A0E8UBC4,UniRef:UniRef50_A0A846XE11,UniRef:UniRef90_R4M8N1
contig_1	Pyrodigal	gene	3008723	3009025	.	-	.	ID=GCA000153685_02836_gene;locus_tag=GCA000153685_02836
contig_1	Pyrodigal	CDS	3008723	3009025	.	-	0	ID=GCA000153685_02836;Name=dUTPase;locus_tag=GCA000153685_02836;product=dUTPase;Parent=GCA000153685_02836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899437.1,SO:0001217,UniParc:UPI00000D0F9D,UniRef:UniRef100_I6YA17,UniRef:UniRef50_I6YA17,UniRef:UniRef90_I6YA17
contig_1	Pyrodigal	gene	3009500	3009913	.	+	.	ID=GCA000153685_02837_gene;locus_tag=GCA000153685_02837;gene=cei
contig_1	Pyrodigal	CDS	3009500	3009913	.	+	0	ID=GCA000153685_02837;Name=envelope integrity protein Cei;locus_tag=GCA000153685_02837;product=envelope integrity protein Cei;gene=cei;Parent=GCA000153685_02837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002178845,UniRef:UniRef100_I6Y1I5,UniRef:UniRef50_Q73W43,UniRef:UniRef90_I6Y1I5
contig_1	Pyrodigal	gene	3009923	3010756	.	-	.	ID=GCA000153685_02838_gene;locus_tag=GCA000153685_02838;gene=suhB
contig_1	Pyrodigal	CDS	3009923	3010756	.	-	0	ID=GCA000153685_02838;Name=inositol-1-monophosphatase SuhB;locus_tag=GCA000153685_02838;product=inositol-1-monophosphatase SuhB;Dbxref=GO:0000287,GO:0006020,GO:0006021,GO:0007165,GO:0008934,GO:0046854;gene=suhB;Parent=GCA000153685_02838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413939,KEGG:K01092,SO:0001217,UniParc:UPI000016512D,UniRef:UniRef100_A0A0H3LCK0,UniRef:UniRef50_P9WKI9,UniRef:UniRef90_P9WKI9;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	3010918	3011715	.	+	.	ID=GCA000153685_02839_gene;locus_tag=GCA000153685_02839;gene=ppgK
contig_1	Pyrodigal	CDS	3010918	3011715	.	+	0	ID=GCA000153685_02839;Name=polyphosphate--glucose phosphotransferase;locus_tag=GCA000153685_02839;product=polyphosphate--glucose phosphotransferase;Dbxref=GO:0004340,GO:0005524,GO:0047330;gene=ppgK;Parent=GCA000153685_02839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413941.1,SO:0001217,UniParc:UPI00001A9145,UniRef:UniRef100_A0A1R3Y1Y1,UniRef:UniRef50_P9WIN1,UniRef:UniRef90_P9WIN1;ec_number=2.7.1.63
contig_1	Pyrodigal	gene	3011895	3013481	.	+	.	ID=GCA000153685_02840_gene;locus_tag=GCA000153685_02840;gene=sigA
contig_1	Pyrodigal	CDS	3011895	3013481	.	+	0	ID=GCA000153685_02840;Name=RNA polymerase sigma factor SigA;locus_tag=GCA000153685_02840;product=RNA polymerase sigma factor SigA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0005886,GO:0006352,GO:0009274,GO:0009415,GO:0016987;gene=sigA;Parent=GCA000153685_02840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03086,RefSeq:WP_003413944.1,SO:0001217,UniParc:UPI0000134816,UniRef:UniRef100_P9WGI1,UniRef:UniRef50_P9WGI1,UniRef:UniRef90_P9WGI1,VFDB:VFC0301,VFDB:VFG001405
contig_1	Pyrodigal	gene	3013518	3013946	.	+	.	ID=GCA000153685_02841_gene;locus_tag=GCA000153685_02841;gene=ridA
contig_1	Pyrodigal	CDS	3013518	3013946	.	+	0	ID=GCA000153685_02841;Name=RidA family protein;locus_tag=GCA000153685_02841;product=RidA family protein;gene=ridA;Parent=GCA000153685_02841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899440.1,SO:0001217,UniParc:UPI00000D10D3,UniRef:UniRef100_I6YA21,UniRef:UniRef50_A0A3E2MX80,UniRef:UniRef90_A0A0H3LDP1
contig_1	Pyrodigal	gene	3013874	3014257	.	-	.	ID=GCA000153685_02842_gene;locus_tag=GCA000153685_02842
contig_1	Pyrodigal	CDS	3013874	3014257	.	-	0	ID=GCA000153685_02842;Name=Glutathione S-transferase domain-containing protein;locus_tag=GCA000153685_02842;product=Glutathione S-transferase domain-containing protein;Parent=GCA000153685_02842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016512F,UniRef:UniRef100_O07206,UniRef:UniRef50_A0A829HTG9,UniRef:UniRef90_O07206
contig_1	Pyrodigal	gene	3014383	3014571	.	+	.	ID=GCA000153685_02843_gene;locus_tag=GCA000153685_02843;gene=dksA
contig_1	Pyrodigal	CDS	3014383	3014571	.	+	0	ID=GCA000153685_02843;Name=DksA C4-type domain-containing protein;locus_tag=GCA000153685_02843;product=DksA C4-type domain-containing protein;gene=dksA;Parent=GCA000153685_02843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D05,UniRef:UniRef100_Q8VJE3,UniRef:UniRef50_B2HLZ3,UniRef:UniRef90_A0A0I9V3N7
contig_1	Pyrodigal	gene	3014633	3015607	.	+	.	ID=GCA000153685_02844_gene;locus_tag=GCA000153685_02844
contig_1	Pyrodigal	CDS	3014633	3015607	.	+	0	ID=GCA000153685_02844;Name=Transmembrane alanine and leucine rich protein;locus_tag=GCA000153685_02844;product=Transmembrane alanine and leucine rich protein;Parent=GCA000153685_02844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413953.1,SO:0001217,UniParc:UPI00000D10F6,UniRef:UniRef100_A5U659,UniRef:UniRef50_Q7AQB2,UniRef:UniRef90_A0A2I7WAC7
contig_1	Pyrodigal	gene	3015608	3015856	.	-	.	ID=GCA000153685_02845_gene;locus_tag=GCA000153685_02845
contig_1	Pyrodigal	CDS	3015608	3015856	.	-	0	ID=GCA000153685_02845;Name=DUF3039 domain-containing protein;locus_tag=GCA000153685_02845;product=DUF3039 domain-containing protein;Parent=GCA000153685_02845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899441.1,SO:0001217,UniParc:UPI00000D0FA7,UniRef:UniRef100_I6X562,UniRef:UniRef50_I6X562,UniRef:UniRef90_I6X562
contig_1	Pyrodigal	gene	3015899	3016345	.	+	.	ID=GCA000153685_02846_gene;locus_tag=GCA000153685_02846
contig_1	Pyrodigal	CDS	3015899	3016345	.	+	0	ID=GCA000153685_02846;Name=Transmembrane protein;locus_tag=GCA000153685_02846;product=Transmembrane protein;Parent=GCA000153685_02846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900554.1,SO:0001217,UniParc:UPI000127818B,UniRef:UniRef100_A0A0H3LGN3,UniRef:UniRef50_G8RKR6,UniRef:UniRef90_A0A829C098
contig_1	Pyrodigal	gene	3016521	3017492	.	+	.	ID=GCA000153685_02847_gene;locus_tag=GCA000153685_02847;gene=sigB
contig_1	Pyrodigal	CDS	3016521	3017492	.	+	0	ID=GCA000153685_02847;Name=sigma-70 family RNA polymerase sigma factor SigB;locus_tag=GCA000153685_02847;product=sigma-70 family RNA polymerase sigma factor SigB;Dbxref=GO:0001666,GO:0003677,GO:0005829,GO:0005886,GO:0006352,GO:0009408,GO:0009410,GO:0016987,GO:0043175,GO:0045893;gene=sigB;Parent=GCA000153685_02847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413958,COG:COG0568,COG:K,KEGG:K03093,RefSeq:WP_003413958.1,SO:0001217,UniParc:UPI00000D121C,UniRef:UniRef100_P9WGI5,UniRef:UniRef50_P9WGI5,UniRef:UniRef90_P9WGI5
contig_1	Pyrodigal	gene	3017625	3018317	.	+	.	ID=GCA000153685_02848_gene;locus_tag=GCA000153685_02848;gene=ideR
contig_1	Pyrodigal	CDS	3017625	3018317	.	+	0	ID=GCA000153685_02848;Name=iron-dependent transcriptional regulator IdeR;locus_tag=GCA000153685_02848;product=iron-dependent transcriptional regulator IdeR;Dbxref=GO:0003677,GO:0003700,GO:0005506,GO:0005737,GO:0005886,GO:0006355,GO:0006979,GO:0008198,GO:0008270,GO:0009274,GO:0016151,GO:0019540,GO:0030145,GO:0045892,GO:0046870,GO:0046983,GO:0050897;gene=ideR;Parent=GCA000153685_02848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003413962,COG:COG1321,COG:K,RefSeq:WP_003413962.1,SO:0001217,UniParc:UPI000012D19B,UniRef:UniRef100_P9WMH1,UniRef:UniRef50_P9WMH1,UniRef:UniRef90_P9WMH1
contig_1	Pyrodigal	gene	3018330	3019412	.	-	.	ID=GCA000153685_02849_gene;locus_tag=GCA000153685_02849
contig_1	Pyrodigal	CDS	3018330	3019412	.	-	0	ID=GCA000153685_02849;Name=DUF4192 domain-containing protein;locus_tag=GCA000153685_02849;product=DUF4192 domain-containing protein;Parent=GCA000153685_02849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE729,UniRef:UniRef100_I6YE70,UniRef:UniRef50_A0A100W3R9,UniRef:UniRef90_I6YE70
contig_1	Pyrodigal	gene	3019492	3020907	.	+	.	ID=GCA000153685_02850_gene;locus_tag=GCA000153685_02850;gene=sthA
contig_1	Pyrodigal	CDS	3019492	3020907	.	+	0	ID=GCA000153685_02850;Name=Si-specific NAD(P)(+) transhydrogenase;locus_tag=GCA000153685_02850;product=Si-specific NAD(P)(+) transhydrogenase;Dbxref=GO:0003957,GO:0004148,GO:0005829,GO:0005886,GO:0006090,GO:0006103,GO:0006739,GO:0009274,GO:0045454,GO:0050660;gene=sthA;Parent=GCA000153685_02850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00322,SO:0001217,UniParc:UPI00005EE72A,UniRef:UniRef100_A5U665,UniRef:UniRef50_A5U665,UniRef:UniRef90_A5U665;ec_number=1.6.1.1
contig_1	Pyrodigal	gene	3021125	3022099	.	+	.	ID=GCA000153685_02851_gene;locus_tag=GCA000153685_02851
contig_1	Pyrodigal	CDS	3021125	3022099	.	+	0	ID=GCA000153685_02851;Name=Alanine and leucine rich protein;locus_tag=GCA000153685_02851;product=Alanine and leucine rich protein;Parent=GCA000153685_02851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900557.1,SO:0001217,UniParc:UPI00000D0FD4,UniRef:UniRef100_I6YA29,UniRef:UniRef50_R4MBC4,UniRef:UniRef90_R4MBC4
contig_1	Pyrodigal	gene	3022158	3023183	.	+	.	ID=GCA000153685_02852_gene;locus_tag=GCA000153685_02852
contig_1	Pyrodigal	CDS	3022158	3023183	.	+	0	ID=GCA000153685_02852;Name=putative protein Mb2734;locus_tag=GCA000153685_02852;product=putative protein Mb2734;Dbxref=GO:0016020,GO:0046464,GO:0047372;Parent=GCA000153685_02852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900558.1,SO:0001217,UniParc:UPI000013BF5A,UniRef:UniRef100_P9WNH3,UniRef:UniRef50_P9WNH3,UniRef:UniRef90_P9WNH3
contig_1	Pyrodigal	gene	3023232	3023918	.	+	.	ID=GCA000153685_02853_gene;locus_tag=GCA000153685_02853
contig_1	Pyrodigal	CDS	3023232	3023918	.	+	0	ID=GCA000153685_02853;Name=putative protein Mb2735;locus_tag=GCA000153685_02853;product=putative protein Mb2735;Dbxref=GO:0005737,GO:0009058,GO:0016853;Parent=GCA000153685_02853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06998,RefSeq:WP_003413971.1,SO:0001217,UniParc:UPI000013BF5B,UniRef:UniRef100_P9WL43,UniRef:UniRef50_P9WL43,UniRef:UniRef90_P9WL43;ec_number=5.3.3.17
contig_1	Pyrodigal	gene	3023927	3024445	.	-	.	ID=GCA000153685_02854_gene;locus_tag=GCA000153685_02854
contig_1	Pyrodigal	CDS	3023927	3024445	.	-	0	ID=GCA000153685_02854;Name=peroxynitrite isomerase;locus_tag=GCA000153685_02854;product=peroxynitrite isomerase;Dbxref=GO:0020037,GO:0046872,GO:0062213;Parent=GCA000153685_02854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF482D,UniRef:UniRef100_P9WFG7,UniRef:UniRef50_P9WFG7,UniRef:UniRef90_P9WFG7;ec_number=5.99.-.-
contig_1	Pyrodigal	gene	3024473	3024937	.	-	.	ID=GCA000153685_02855_gene;locus_tag=GCA000153685_02855;gene=nrdR
contig_1	Pyrodigal	CDS	3024473	3024937	.	-	0	ID=GCA000153685_02855;Name=transcriptional regulator NrdR;locus_tag=GCA000153685_02855;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000153685_02855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_003413973.1,SO:0001217,UniParc:UPI000013BF5D,UniRef:UniRef100_P9WIZ1,UniRef:UniRef50_P9WIZ1,UniRef:UniRef90_P9WIZ1
contig_1	Pyrodigal	gene	3025100	3025597	.	-	.	ID=GCA000153685_02856_gene;locus_tag=GCA000153685_02856;gene=chiZ
contig_1	Pyrodigal	CDS	3025100	3025597	.	-	0	ID=GCA000153685_02856;Name=Cell wall hydrolase ChiZ;locus_tag=GCA000153685_02856;product=Cell wall hydrolase ChiZ;Dbxref=GO:0005886,GO:0016787,GO:0071555;gene=chiZ;Parent=GCA000153685_02856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899446.1,SO:0001217,UniParc:UPI00000D10DB,UniRef:UniRef100_I6YA32,UniRef:UniRef50_I6YA32,UniRef:UniRef90_I6YA32;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	3025848	3026558	.	+	.	ID=GCA000153685_02857_gene;locus_tag=GCA000153685_02857;gene=lexA
contig_1	Pyrodigal	CDS	3025848	3026558	.	+	0	ID=GCA000153685_02857;Name=transcriptional repressor LexA;locus_tag=GCA000153685_02857;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0006974,GO:0009274,GO:0009432,GO:0045892,GO:0046677;gene=lexA;Parent=GCA000153685_02857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01356,RefSeq:WP_003899448.1,SO:0001217,UniParc:UPI00005EE72F,UniRef:UniRef100_P9WHR7,UniRef:UniRef50_P9WHR7,UniRef:UniRef90_P9WHR7;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	3026580	3028679	.	-	.	ID=GCA000153685_02858_gene;locus_tag=GCA000153685_02858
contig_1	Pyrodigal	CDS	3026580	3028679	.	-	0	ID=GCA000153685_02858;Name=Transmembrane alanine and glycine rich protein;locus_tag=GCA000153685_02858;product=Transmembrane alanine and glycine rich protein;Parent=GCA000153685_02858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900560.1,SO:0001217,UniParc:UPI00000D0FF7,UniRef:UniRef100_I6XF52,UniRef:UniRef50_H8IVZ0,UniRef:UniRef90_A0A829C2E1
contig_1	Pyrodigal	gene	3028969	3030162	.	+	.	ID=GCA000153685_02859_gene;locus_tag=GCA000153685_02859
contig_1	Pyrodigal	CDS	3028969	3030162	.	+	0	ID=GCA000153685_02859;Name=putative membrane protein Rv2723;locus_tag=GCA000153685_02859;product=putative membrane protein Rv2723;Dbxref=GO:0005886;Parent=GCA000153685_02859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413979.1,SO:0001217,UniParc:UPI000013BF61,UniRef:UniRef100_P9WG93,UniRef:UniRef50_P9WG93,UniRef:UniRef90_P9WG93
contig_1	Pyrodigal	gene	3030191	3031351	.	-	.	ID=GCA000153685_02860_gene;locus_tag=GCA000153685_02860;gene=caiA
contig_1	Pyrodigal	CDS	3030191	3031351	.	-	0	ID=GCA000153685_02860;Name=Acyl-CoA dehydrogenase FadE20;locus_tag=GCA000153685_02860;product=Acyl-CoA dehydrogenase FadE20;gene=caiA;Parent=GCA000153685_02860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_003413981.1,SO:0001217,UniParc:UPI00000D4F60,UniRef:UniRef100_A5U676,UniRef:UniRef50_A0A8J3LTB9,UniRef:UniRef90_L7V6F5
contig_1	Pyrodigal	gene	3031487	3032974	.	-	.	ID=GCA000153685_02861_gene;locus_tag=GCA000153685_02861;gene=hflX
contig_1	Pyrodigal	CDS	3031487	3032974	.	-	0	ID=GCA000153685_02861;Name=GTPase HflX;locus_tag=GCA000153685_02861;product=GTPase HflX;Dbxref=GO:0005525;gene=hflX;Parent=GCA000153685_02861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413984.1,SO:0001217,UniParc:UPI00000C1528,UniRef:UniRef100_O33230,UniRef:UniRef50_A0A239D1M3,UniRef:UniRef90_O33230
contig_1	Pyrodigal	gene	3032991	3033860	.	-	.	ID=GCA000153685_02862_gene;locus_tag=GCA000153685_02862;gene=dapF
contig_1	Pyrodigal	CDS	3032991	3033860	.	-	0	ID=GCA000153685_02862;Name=diaminopimelate epimerase;locus_tag=GCA000153685_02862;product=diaminopimelate epimerase;Dbxref=GO:0005829,GO:0005886,GO:0008837,GO:0009089;gene=dapF;Parent=GCA000153685_02862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413987.1,SO:0001217,UniParc:UPI0000128EBA,UniRef:UniRef100_P9WP19,UniRef:UniRef50_P9WP19,UniRef:UniRef90_P9WP19;ec_number=5.1.1.7
contig_1	Pyrodigal	gene	3033885	3034829	.	-	.	ID=GCA000153685_02863_gene;locus_tag=GCA000153685_02863;gene=miaA
contig_1	Pyrodigal	CDS	3033885	3034829	.	-	0	ID=GCA000153685_02863;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000153685_02863;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000153685_02863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413989.1,SO:0001217,UniParc:UPI000012F0C5,UniRef:UniRef100_P9WJW1,UniRef:UniRef50_Q8NP72,UniRef:UniRef90_P9WJW1;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	3034826	3035521	.	-	.	ID=GCA000153685_02864_gene;locus_tag=GCA000153685_02864
contig_1	Pyrodigal	CDS	3034826	3035521	.	-	0	ID=GCA000153685_02864;Name=Conserved alanine rich protein;locus_tag=GCA000153685_02864;product=Conserved alanine rich protein;Parent=GCA000153685_02864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899452.1,SO:0001217,UniParc:UPI00000D10C7,UniRef:UniRef100_I6X579,UniRef:UniRef50_A0A2U3PI44,UniRef:UniRef90_I6X579
contig_1	Pyrodigal	gene	3035630	3036535	.	-	.	ID=GCA000153685_02865_gene;locus_tag=GCA000153685_02865
contig_1	Pyrodigal	CDS	3035630	3036535	.	-	0	ID=GCA000153685_02865;Name=Integral membrane alanine valine and leucine rich protein;locus_tag=GCA000153685_02865;product=Integral membrane alanine valine and leucine rich protein;Parent=GCA000153685_02865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413995.1,SO:0001217,UniParc:UPI0000165132,UniRef:UniRef100_A0A0H3LCQ4,UniRef:UniRef50_A0A1B7U272,UniRef:UniRef90_A0A0H3LCQ4
contig_1	Pyrodigal	gene	3037086	3038438	.	+	.	ID=GCA000153685_02866_gene;locus_tag=GCA000153685_02866
contig_1	Pyrodigal	CDS	3037086	3038438	.	+	0	ID=GCA000153685_02866;Name=putative protein MRA_2757;locus_tag=GCA000153685_02866;product=putative protein MRA_2757;Parent=GCA000153685_02866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036398.1,SO:0001217,UniParc:UPI0003AB4A90,UniRef:UniRef100_UPI0003AB4A90,UniRef:UniRef50_A0QVX6,UniRef:UniRef90_A5U683
contig_1	Pyrodigal	gene	3038435	3039049	.	-	.	ID=GCA000153685_02867_gene;locus_tag=GCA000153685_02867
contig_1	Pyrodigal	CDS	3038435	3039049	.	-	0	ID=GCA000153685_02867;Name=Transmembrane protein;locus_tag=GCA000153685_02867;product=Transmembrane protein;Parent=GCA000153685_02867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003413999.1,SO:0001217,UniParc:UPI00000C1529,UniRef:UniRef100_A5U684,UniRef:UniRef50_I4BI04,UniRef:UniRef90_Q8VJE1
contig_1	Pyrodigal	gene	3039046	3040584	.	-	.	ID=GCA000153685_02868_gene;locus_tag=GCA000153685_02868;gene=miaB
contig_1	Pyrodigal	CDS	3039046	3040584	.	-	0	ID=GCA000153685_02868;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000153685_02868;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000153685_02868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06168,RefSeq:WP_003414001.1,SO:0001217,UniParc:UPI000013BF66,UniRef:UniRef100_P9WK05,UniRef:UniRef50_Q8FPD5,UniRef:UniRef90_P9WK05;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	3040881	3041735	.	+	.	ID=GCA000153685_02869_gene;locus_tag=GCA000153685_02869
contig_1	Pyrodigal	CDS	3040881	3041735	.	+	0	ID=GCA000153685_02869;Name=Phage Gp37Gp68 family protein;locus_tag=GCA000153685_02869;product=Phage Gp37Gp68 family protein;Parent=GCA000153685_02869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899455.1,SO:0001217,UniParc:UPI00000D1047,UniRef:UniRef100_I6YA42,UniRef:UniRef50_I6YA42,UniRef:UniRef90_I6YA42
contig_1	Pyrodigal	gene	3041620	3042612	.	-	.	ID=GCA000153685_02870_gene;locus_tag=GCA000153685_02870;gene=tcmP
contig_1	Pyrodigal	CDS	3041620	3042612	.	-	0	ID=GCA000153685_02870;Name=Three-Cys-motif partner protein TcmP;locus_tag=GCA000153685_02870;product=Three-Cys-motif partner protein TcmP;gene=tcmP;Parent=GCA000153685_02870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899456.1,SO:0001217,UniParc:UPI00000D100B,UniRef:UniRef100_I6Y1K7,UniRef:UniRef50_A1SC18,UniRef:UniRef90_I6Y1K7
contig_1	Pyrodigal	gene	3042622	3043158	.	-	.	ID=GCA000153685_02871_gene;locus_tag=GCA000153685_02871;gene=recX
contig_1	Pyrodigal	CDS	3042622	3043158	.	-	0	ID=GCA000153685_02871;Name=recombination regulator RecX;locus_tag=GCA000153685_02871;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0005886,GO:0006282;gene=recX;Parent=GCA000153685_02871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165134,UniRef:UniRef100_P9WHI1,UniRef:UniRef50_P9WHI1,UniRef:UniRef90_P9WHI1
contig_1	Pyrodigal	gene	3043112	3045484	.	-	.	ID=GCA000153685_02872_gene;locus_tag=GCA000153685_02872;gene=recA
contig_1	Pyrodigal	CDS	3043112	3045484	.	-	0	ID=GCA000153685_02872;Name=intein-containing recombinase RecA;locus_tag=GCA000153685_02872;product=intein-containing recombinase RecA;Dbxref=GO:0000150,GO:0000287,GO:0000725,GO:0003684,GO:0003697,GO:0004520,GO:0005524,GO:0005829,GO:0006314,GO:0006974,GO:0008094,GO:0009432,GO:0009650,GO:0016539,GO:0016887,GO:0030145,GO:0042148,GO:0046677,GO:0140664;gene=recA;Parent=GCA000153685_02872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03553,RefSeq:WP_003414006.1,SO:0001217,UniParc:UPI0000040744,UniRef:UniRef100_P9WHJ3,UniRef:UniRef50_P9WHJ3,UniRef:UniRef90_P9WHJ3
contig_1	Pyrodigal	gene	3045866	3046072	.	-	.	ID=GCA000153685_02873_gene;locus_tag=GCA000153685_02873
contig_1	Pyrodigal	CDS	3045866	3046072	.	-	0	ID=GCA000153685_02873;Name=DUF3046 domain-containing protein;locus_tag=GCA000153685_02873;product=DUF3046 domain-containing protein;Parent=GCA000153685_02873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414010.1,SO:0001217,UniParc:UPI00000D106E,UniRef:UniRef100_I6YA47,UniRef:UniRef50_I6YA47,UniRef:UniRef90_I6YA47
contig_1	Pyrodigal	gene	3046083	3047249	.	-	.	ID=GCA000153685_02874_gene;locus_tag=GCA000153685_02874
contig_1	Pyrodigal	CDS	3046083	3047249	.	-	0	ID=GCA000153685_02874;Name=Erythromycin biosynthesis protein CIII-like C-terminal domain-containing protein;locus_tag=GCA000153685_02874;product=Erythromycin biosynthesis protein CIII-like C-terminal domain-containing protein;Parent=GCA000153685_02874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901461.1,SO:0001217,UniParc:UPI000016530D,UniRef:UniRef100_O33282,UniRef:UniRef50_A0A6N7CA40,UniRef:UniRef90_R4M597
contig_1	Pyrodigal	gene	3047293	3047742	.	+	.	ID=GCA000153685_02875_gene;locus_tag=GCA000153685_02875;gene=ephG
contig_1	Pyrodigal	CDS	3047293	3047742	.	+	0	ID=GCA000153685_02875;Name=epoxide hydrolase;locus_tag=GCA000153685_02875;product=epoxide hydrolase;Dbxref=GO:0004301,GO:0005886,GO:0033963,GO:0097176;gene=ephG;Parent=GCA000153685_02875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414015,KEGG:K10533,RefSeq:WP_003414015.1,SO:0001217,UniParc:UPI00000C1520,UniRef:UniRef100_O33283,UniRef:UniRef50_O33283,UniRef:UniRef90_O33283;ec_number=3.3.2.10
contig_1	Pyrodigal	gene	3047974	3049551	.	+	.	ID=GCA000153685_02876_gene;locus_tag=GCA000153685_02876
contig_1	Pyrodigal	CDS	3047974	3049551	.	+	0	ID=GCA000153685_02876;Name=PE-PGRS family protein;locus_tag=GCA000153685_02876;product=PE-PGRS family protein;Parent=GCA000153685_02876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014848111.1,SO:0001217,UniParc:UPI00026D42B0,UniRef:UniRef100_A5U694,UniRef:UniRef50_Q79FB3,UniRef:UniRef90_A5U694
contig_1	Pyrodigal	gene	3050079	3050483	.	+	.	ID=GCA000153685_02877_gene;locus_tag=GCA000153685_02877
contig_1	Pyrodigal	CDS	3050079	3050483	.	+	0	ID=GCA000153685_02877;Name=putative protein Rv2742A;locus_tag=GCA000153685_02877;product=putative protein Rv2742A;Dbxref=GO:0005886;Parent=GCA000153685_02877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912838.1,SO:0001217,UniParc:UPI00005EE738,UniRef:UniRef100_P0DMQ8,UniRef:UniRef50_P0DMQ8,UniRef:UniRef90_P0DMQ8
contig_1	Pyrodigal	gene	3050480	3051292	.	-	.	ID=GCA000153685_02878_gene;locus_tag=GCA000153685_02878;gene=pspM
contig_1	Pyrodigal	CDS	3050480	3051292	.	-	0	ID=GCA000153685_02878;Name=phage shock envelope stress response protein PspM;locus_tag=GCA000153685_02878;product=phage shock envelope stress response protein PspM;Dbxref=GO:0016020;gene=pspM;Parent=GCA000153685_02878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414026.1,SO:0001217,UniParc:UPI00000D0F36,UniRef:UniRef100_I6YA50,UniRef:UniRef50_I6YA50,UniRef:UniRef90_I6YA50
contig_1	Pyrodigal	gene	3051311	3052123	.	-	.	ID=GCA000153685_02879_gene;locus_tag=GCA000153685_02879;gene=pspA
contig_1	Pyrodigal	CDS	3051311	3052123	.	-	0	ID=GCA000153685_02879;Name=PspA protein;locus_tag=GCA000153685_02879;product=PspA protein;Dbxref=GO:0005737,GO:0005886,GO:0009274;gene=pspA;Parent=GCA000153685_02879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03969,RefSeq:WP_003414030.1,SO:0001217,UniParc:UPI0000124EC4,UniRef:UniRef100_P9WHP5,UniRef:UniRef50_P9WHP5,UniRef:UniRef90_P9WHP5
contig_1	Pyrodigal	gene	3052253	3052591	.	-	.	ID=GCA000153685_02880_gene;locus_tag=GCA000153685_02880;gene=clgR
contig_1	Pyrodigal	CDS	3052253	3052591	.	-	0	ID=GCA000153685_02880;Name=transcriptional regulator ClgR;locus_tag=GCA000153685_02880;product=transcriptional regulator ClgR;Dbxref=GO:0003677,GO:0006355,GO:0006979,GO:0009408,GO:0010447,GO:0043565,GO:0045893,GO:0051701,GO:0052170,GO:0061136,GO:0085016,GO:0090062;gene=clgR;Parent=GCA000153685_02880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414032,KEGG:K27043,RefSeq:WP_003414032.1,SO:0001217,UniParc:UPI00000D5E29,UniRef:UniRef100_P9WMH7,UniRef:UniRef50_P9WMH7,UniRef:UniRef90_P9WMH7
contig_1	Pyrodigal	gene	3052662	3053291	.	-	.	ID=GCA000153685_02881_gene;locus_tag=GCA000153685_02881;gene=pgsA
contig_1	Pyrodigal	CDS	3052662	3053291	.	-	0	ID=GCA000153685_02881;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;locus_tag=GCA000153685_02881;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;Dbxref=GO:0005886,GO:0008444,GO:0008654,GO:0009274,GO:0016020,GO:0046474;gene=pgsA;Parent=GCA000153685_02881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00995,RefSeq:WP_003414035.1,SO:0001217,UniParc:UPI00000D5E4D,UniRef:UniRef100_P9WPG3,UniRef:UniRef50_P9WPG3,UniRef:UniRef90_P9WPG3;ec_number=2.7.8.5
contig_1	Pyrodigal	gene	3053352	3053846	.	+	.	ID=GCA000153685_02882_gene;locus_tag=GCA000153685_02882;gene=argA
contig_1	Pyrodigal	CDS	3053352	3053846	.	+	0	ID=GCA000153685_02882;Name=amino-acid N-acetyltransferase;locus_tag=GCA000153685_02882;product=amino-acid N-acetyltransferase;Dbxref=GO:0004042,GO:0005737,GO:0006526,GO:0008080,GO:0042450,GO:0042803,GO:0051289;gene=argA;Parent=GCA000153685_02882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165135,UniRef:UniRef100_Q7D6N4,UniRef:UniRef50_O33289,UniRef:UniRef90_O33289;ec_number=2.3.1.1
contig_1	Pyrodigal	gene	3053915	3056218	.	-	.	ID=GCA000153685_02883_gene;locus_tag=GCA000153685_02883;gene=ftsK
contig_1	Pyrodigal	CDS	3053915	3056218	.	-	0	ID=GCA000153685_02883;Name=DNA translocase FtsK;locus_tag=GCA000153685_02883;product=DNA translocase FtsK;Dbxref=GO:0003677,GO:0005524,GO:0005829,GO:0005886,GO:0007059,GO:0009274,GO:0051301;gene=ftsK;Parent=GCA000153685_02883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE73C,UniRef:UniRef100_P9WNA3,UniRef:UniRef50_P9WNA3,UniRef:UniRef90_P9WNA3
contig_1	Pyrodigal	gene	3056565	3056879	.	+	.	ID=GCA000153685_02884_gene;locus_tag=GCA000153685_02884
contig_1	Pyrodigal	CDS	3056565	3056879	.	+	0	ID=GCA000153685_02884;Name=Conserved protein;locus_tag=GCA000153685_02884;product=Conserved protein;Parent=GCA000153685_02884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414042.1,SO:0001217,UniParc:UPI00000C1521,UniRef:UniRef100_O33291,UniRef:UniRef50_O33291,UniRef:UniRef90_O33291
contig_1	Pyrodigal	gene	3056876	3057694	.	+	.	ID=GCA000153685_02885_gene;locus_tag=GCA000153685_02885
contig_1	Pyrodigal	CDS	3056876	3057694	.	+	0	ID=GCA000153685_02885;Name=Rv2750 family mycofactocin-dependent SDR oxidoreductase;locus_tag=GCA000153685_02885;product=Rv2750 family mycofactocin-dependent SDR oxidoreductase;Dbxref=GO:0016616;Parent=GCA000153685_02885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414045,RefSeq:WP_003414045.1,SO:0001217,UniParc:UPI00000D5FD9,UniRef:UniRef100_P9WGS5,UniRef:UniRef50_P9WGS5,UniRef:UniRef90_P9WGS5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3057698	3058588	.	+	.	ID=GCA000153685_02886_gene;locus_tag=GCA000153685_02886
contig_1	Pyrodigal	CDS	3057698	3058588	.	+	0	ID=GCA000153685_02886;Name=S-adenosyl-L-methionine-dependent methyltransferase;locus_tag=GCA000153685_02886;product=S-adenosyl-L-methionine-dependent methyltransferase;Parent=GCA000153685_02886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899463.1,SO:0001217,UniParc:UPI00000C1522,UniRef:UniRef100_I6YEA3,UniRef:UniRef50_I6YEA3,UniRef:UniRef90_I6YEA3
contig_1	Pyrodigal	gene	3058575	3060251	.	-	.	ID=GCA000153685_02887_gene;locus_tag=GCA000153685_02887;gene=rnj
contig_1	Pyrodigal	CDS	3058575	3060251	.	-	0	ID=GCA000153685_02887;Name=ribonuclease J;locus_tag=GCA000153685_02887;product=ribonuclease J;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270,GO:0008800;gene=rnj;Parent=GCA000153685_02887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414049,COG:COG0595,COG:J,RefSeq:WP_003414049.1,SO:0001217,UniParc:UPI00000D5FF5,UniRef:UniRef100_P9WGZ9,UniRef:UniRef50_P9WGZ9,UniRef:UniRef90_P9WGZ9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3060282	3061184	.	-	.	ID=GCA000153685_02888_gene;locus_tag=GCA000153685_02888;gene=dapA
contig_1	Pyrodigal	CDS	3060282	3061184	.	-	0	ID=GCA000153685_02888;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000153685_02888;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0005886,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000153685_02888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900564.1,SO:0001217,UniParc:UPI000011D95D,UniRef:UniRef100_P9WP25,UniRef:UniRef50_P9WP25,UniRef:UniRef90_P9WP25;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	3061253	3062005	.	-	.	ID=GCA000153685_02889_gene;locus_tag=GCA000153685_02889;gene=thyX
contig_1	Pyrodigal	CDS	3061253	3062005	.	-	0	ID=GCA000153685_02889;Name=FAD-dependent thymidylate synthase;locus_tag=GCA000153685_02889;product=FAD-dependent thymidylate synthase;Dbxref=GO:0004799,GO:0006231,GO:0006235,GO:0032259,GO:0050660,GO:0050797,GO:0070402;gene=thyX;Parent=GCA000153685_02889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899465.1,SO:0001217,UniParc:UPI0000136F3C,UniRef:UniRef100_P9WG57,UniRef:UniRef50_P9WG57,UniRef:UniRef90_P9WG57;ec_number=2.1.1.148
contig_1	Pyrodigal	gene	3062521	3064143	.	-	.	ID=GCA000153685_02890_gene;locus_tag=GCA000153685_02890
contig_1	Pyrodigal	CDS	3062521	3064143	.	-	0	ID=GCA000153685_02890;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000153685_02890;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000153685_02890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_003414057.1,SO:0001217,UniParc:UPI0000165136,UniRef:UniRef100_A0A1R3Y434,UniRef:UniRef50_O33298,UniRef:UniRef90_O33298;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	3064230	3064646	.	-	.	ID=GCA000153685_02891_gene;locus_tag=GCA000153685_02891;gene=vapC21
contig_1	Pyrodigal	CDS	3064230	3064646	.	-	0	ID=GCA000153685_02891;Name=type II toxin-antitoxin system toxin ribonuclease C21;locus_tag=GCA000153685_02891;product=type II toxin-antitoxin system toxin ribonuclease C21;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC21;Parent=GCA000153685_02891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414059,RefSeq:WP_003414059.1,SO:0001217,UniParc:UPI00000D1156,UniRef:UniRef100_P9WF91,UniRef:UniRef50_P9WF91,UniRef:UniRef90_P9WF91;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3064643	3064858	.	-	.	ID=GCA000153685_02892_gene;locus_tag=GCA000153685_02892;gene=vapB21
contig_1	Pyrodigal	CDS	3064643	3064858	.	-	0	ID=GCA000153685_02892;Name=Antitoxin VapB21;locus_tag=GCA000153685_02892;product=Antitoxin VapB21;Dbxref=GO:0045927;gene=vapB21;Parent=GCA000153685_02892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917054.1,SO:0001217,UniParc:UPI0001901610,UniRef:UniRef100_P9WJ43,UniRef:UniRef50_P9WJ43,UniRef:UniRef90_P9WJ43
contig_1	Pyrodigal	gene	3064935	3065330	.	-	.	ID=GCA000153685_02893_gene;locus_tag=GCA000153685_02893;gene=vapC42
contig_1	Pyrodigal	CDS	3064935	3065330	.	-	0	ID=GCA000153685_02893;Name=Ribonuclease VapC42;locus_tag=GCA000153685_02893;product=Ribonuclease VapC42;Dbxref=GO:0000287,GO:0004540;gene=vapC42;Parent=GCA000153685_02893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19686,RefSeq:WP_003414064.1,SO:0001217,UniParc:UPI000013BF77,UniRef:UniRef100_P9WF57,UniRef:UniRef50_P9WF57,UniRef:UniRef90_P9WF57;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3065327	3065596	.	-	.	ID=GCA000153685_02894_gene;locus_tag=GCA000153685_02894;gene=vapB42
contig_1	Pyrodigal	CDS	3065327	3065596	.	-	0	ID=GCA000153685_02894;Name=Putative antitoxin VapB42;locus_tag=GCA000153685_02894;product=Putative antitoxin VapB42;gene=vapB42;Parent=GCA000153685_02894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414066.1,SO:0001217,UniParc:UPI00000D0F53,UniRef:UniRef100_P9WJ19,UniRef:UniRef50_P9WJ19,UniRef:UniRef90_P9WJ19
contig_1	Pyrodigal	gene	3065606	3066700	.	-	.	ID=GCA000153685_02895_gene;locus_tag=GCA000153685_02895;gene=hsdS
contig_1	Pyrodigal	CDS	3065606	3066700	.	-	0	ID=GCA000153685_02895;Name=putative type I restriction/modification system specificity determinant HsdS (S protein);locus_tag=GCA000153685_02895;product=putative type I restriction/modification system specificity determinant HsdS (S protein);gene=hsdS;Parent=GCA000153685_02895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900565.1,SO:0001217,UniParc:UPI00012781DC,UniRef:UniRef100_A0A0H3LGU5,UniRef:UniRef50_I6YEB1,UniRef:UniRef90_I6YEB1
contig_1	Pyrodigal	gene	3066697	3067116	.	-	.	ID=GCA000153685_02896_gene;locus_tag=GCA000153685_02896
contig_1	Pyrodigal	CDS	3066697	3067116	.	-	0	ID=GCA000153685_02896;Name=Winged helix-turn-helix domain-containing protein;locus_tag=GCA000153685_02896;product=Winged helix-turn-helix domain-containing protein;Parent=GCA000153685_02896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414070.1,SO:0001217,UniParc:UPI00000D0F75,UniRef:UniRef100_I6X5B0,UniRef:UniRef50_I6X5B0,UniRef:UniRef90_I6X5B0
contig_1	Pyrodigal	gene	3067190	3067675	.	-	.	ID=GCA000153685_02897_gene;locus_tag=GCA000153685_02897;gene=dfrA
contig_1	Pyrodigal	CDS	3067190	3067675	.	-	0	ID=GCA000153685_02897;Name=dihydrofolate reductase;locus_tag=GCA000153685_02897;product=dihydrofolate reductase;Dbxref=GO:0004146,GO:0005829,GO:0006730,GO:0046452,GO:0046654,GO:0046655,GO:0050661,GO:0070401;gene=dfrA;Parent=GCA000153685_02897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000637198,BlastRules:WP_003414073,KEGG:K00287,SO:0001217,UniParc:UPI00012781DD,UniRef:UniRef100_P9WNX1,UniRef:UniRef50_P9WNX1,UniRef:UniRef90_P9WNX1;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	3067740	3068540	.	-	.	ID=GCA000153685_02898_gene;locus_tag=GCA000153685_02898;gene=thyA
contig_1	Pyrodigal	CDS	3067740	3068540	.	-	0	ID=GCA000153685_02898;Name=thymidylate synthase;locus_tag=GCA000153685_02898;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259,GO:0046079,GO:0046677;gene=thyA;Parent=GCA000153685_02898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00560,RefSeq:WP_003911953.1,SO:0001217,UniParc:UPI0000165137,UniRef:UniRef100_P9WFR9,UniRef:UniRef50_P9WFR9,UniRef:UniRef90_P9WFR9;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	3068696	3069433	.	+	.	ID=GCA000153685_02899_gene;locus_tag=GCA000153685_02899
contig_1	Pyrodigal	CDS	3068696	3069433	.	+	0	ID=GCA000153685_02899;Name=Dienelactone hydrolase domain-containing protein;locus_tag=GCA000153685_02899;product=Dienelactone hydrolase domain-containing protein;Parent=GCA000153685_02899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414079.1,SO:0001217,UniParc:UPI00000D5F84,UniRef:UniRef100_A5U6B8,UniRef:UniRef50_A0A5N5V9C6,UniRef:UniRef90_R4M931
contig_1	Pyrodigal	gene	3069648	3070430	.	-	.	ID=GCA000153685_02900_gene;locus_tag=GCA000153685_02900
contig_1	Pyrodigal	CDS	3069648	3070430	.	-	0	ID=GCA000153685_02900;Name=Short-chain dehydrogenase/reductase;locus_tag=GCA000153685_02900;product=Short-chain dehydrogenase/reductase;Parent=GCA000153685_02900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414081.1,SO:0001217,UniParc:UPI00000D5F78,UniRef:UniRef100_A5U6B9,UniRef:UniRef50_R4MJS5,UniRef:UniRef90_A0A0T9V939
contig_1	Pyrodigal	gene	3070954	3072138	.	-	.	ID=GCA000153685_02901_gene;locus_tag=GCA000153685_02901
contig_1	Pyrodigal	CDS	3070954	3072138	.	-	0	ID=GCA000153685_02901;Name=PPE family protein;locus_tag=GCA000153685_02901;product=PPE family protein;Parent=GCA000153685_02901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900568.1,SO:0001217,UniParc:UPI0000165310,UniRef:UniRef100_Q79FA9,UniRef:UniRef50_P9WI31,UniRef:UniRef90_Q7D6M2
contig_1	Pyrodigal	gene	3072218	3073045	.	-	.	ID=GCA000153685_02902_gene;locus_tag=GCA000153685_02902
contig_1	Pyrodigal	CDS	3072218	3073045	.	-	0	ID=GCA000153685_02902;Name=PE family protein PE27;locus_tag=GCA000153685_02902;product=PE family protein PE27;Parent=GCA000153685_02902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899469.1,SO:0001217,UniParc:UPI00005F6338,UniRef:UniRef100_A0A0H3LCT5,UniRef:UniRef50_A0A1A3DJ30,UniRef:UniRef90_Q79FA8
contig_1	Pyrodigal	gene	3073369	3074475	.	-	.	ID=GCA000153685_02903_gene;locus_tag=GCA000153685_02903;gene=pPE44
contig_1	Pyrodigal	CDS	3073369	3074475	.	-	0	ID=GCA000153685_02903;Name=putative PPE family protein PPE44;locus_tag=GCA000153685_02903;product=putative PPE family protein PPE44;Dbxref=GO:0052572;gene=pPE44;Parent=GCA000153685_02903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE744,UniRef:UniRef100_P9WHZ3,UniRef:UniRef50_P9WI31,UniRef:UniRef90_P9WHZ3
contig_1	Pyrodigal	gene	3074641	3075093	.	-	.	ID=GCA000153685_02904_gene;locus_tag=GCA000153685_02904
contig_1	Pyrodigal	CDS	3074641	3075093	.	-	0	ID=GCA000153685_02904;Name=Flavodoxin;locus_tag=GCA000153685_02904;product=Flavodoxin;Parent=GCA000153685_02904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414091.1,SO:0001217,UniParc:UPI000016513A,UniRef:UniRef100_A0A1R3Y249,UniRef:UniRef50_O33313,UniRef:UniRef90_O33313
contig_1	Pyrodigal	gene	3075078	3075182	.	-	.	ID=GCA000153685_02905_gene;locus_tag=GCA000153685_02905
contig_1	Pyrodigal	CDS	3075078	3075182	.	-	0	ID=GCA000153685_02905;Name=hypothetical protein;locus_tag=GCA000153685_02905;product=hypothetical protein;Parent=GCA000153685_02905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42B2,UniRef:UniRef100_A0A0E7YCB9,UniRef:UniRef50_A0A0E7YCB9,UniRef:UniRef90_A0A0E7YCB9
contig_1	Pyrodigal	gene	3075179	3075652	.	-	.	ID=GCA000153685_02906_gene;locus_tag=GCA000153685_02906
contig_1	Pyrodigal	CDS	3075179	3075652	.	-	0	ID=GCA000153685_02906;Name=Transmembrane protein;locus_tag=GCA000153685_02906;product=Transmembrane protein;Parent=GCA000153685_02906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414097.1,SO:0001217,UniParc:UPI00000D1087,UniRef:UniRef100_A0A0H3LJN3,UniRef:UniRef50_A0A653F9A4,UniRef:UniRef90_A0A8I0EP14
contig_1	Pyrodigal	gene	3075664	3076356	.	-	.	ID=GCA000153685_02907_gene;locus_tag=GCA000153685_02907;gene=dapB
contig_1	Pyrodigal	CDS	3075664	3076356	.	-	0	ID=GCA000153685_02907;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000153685_02907;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0005886,GO:0008839,GO:0009089,GO:0009274,GO:0016726,GO:0019877,GO:0070402,GO:0070404;gene=dapB;Parent=GCA000153685_02907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00215,SO:0001217,UniParc:UPI0002F98C30,UniRef:UniRef100_P9WP23,UniRef:UniRef50_P9WP23,UniRef:UniRef90_P9WP23;ec_number=1.17.1.8
contig_1	Pyrodigal	gene	3076400	3076534	.	+	.	ID=GCA000153685_02908_gene;locus_tag=GCA000153685_02908
contig_1	Pyrodigal	CDS	3076400	3076534	.	+	0	ID=GCA000153685_02908;Name=hypothetical protein;locus_tag=GCA000153685_02908;product=hypothetical protein;Parent=GCA000153685_02908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021082721.1,SO:0001217,UniParc:UPI0002D8C9E2,UniRef:UniRef100_A0A655AS67,UniRef:UniRef50_A0A655AS67,UniRef:UniRef90_A0A655AS67
contig_1	Pyrodigal	gene	3076969	3077430	.	+	.	ID=GCA000153685_02909_gene;locus_tag=GCA000153685_02909
contig_1	Pyrodigal	CDS	3076969	3077430	.	+	0	ID=GCA000153685_02909;Name=putative N-acetyltransferase Rv2775;locus_tag=GCA000153685_02909;product=putative N-acetyltransferase Rv2775;Dbxref=GO:0016747;Parent=GCA000153685_02909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414102.1,SO:0001217,UniParc:UPI0000165312,UniRef:UniRef100_Q7D6L6,UniRef:UniRef50_O33317,UniRef:UniRef90_O33317;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	3077434	3078510	.	-	.	ID=GCA000153685_02910_gene;locus_tag=GCA000153685_02910
contig_1	Pyrodigal	CDS	3077434	3078510	.	-	0	ID=GCA000153685_02910;Name=Oxidoreductase;locus_tag=GCA000153685_02910;product=Oxidoreductase;Parent=GCA000153685_02910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62199,UniRef:UniRef100_A0A0E8NUU4,UniRef:UniRef50_D5PC14,UniRef:UniRef90_A0A0E8NUU4
contig_1	Pyrodigal	gene	3078545	3079462	.	-	.	ID=GCA000153685_02911_gene;locus_tag=GCA000153685_02911
contig_1	Pyrodigal	CDS	3078545	3079462	.	-	0	ID=GCA000153685_02911;Name=Metal-dependent hydrolase;locus_tag=GCA000153685_02911;product=Metal-dependent hydrolase;Parent=GCA000153685_02911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07044,RefSeq:WP_003911957.1,SO:0001217,UniParc:UPI00005EE748,UniRef:UniRef100_Q7D6L4,UniRef:UniRef50_A0A1V3XW04,UniRef:UniRef90_O33319
contig_1	Pyrodigal	gene	3079773	3080243	.	-	.	ID=GCA000153685_02912_gene;locus_tag=GCA000153685_02912
contig_1	Pyrodigal	CDS	3079773	3080243	.	-	0	ID=GCA000153685_02912;Name=Polyketide cyclase;locus_tag=GCA000153685_02912;product=Polyketide cyclase;Parent=GCA000153685_02912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899475.1,SO:0001217,UniParc:UPI00000D1015,UniRef:UniRef100_I6Y1P2,UniRef:UniRef50_A0A6N4UUE1,UniRef:UniRef90_A0A0H3LCR7
contig_1	Pyrodigal	gene	3080275	3080790	.	-	.	ID=GCA000153685_02913_gene;locus_tag=GCA000153685_02913;gene=aldR
contig_1	Pyrodigal	CDS	3080275	3080790	.	-	0	ID=GCA000153685_02913;Name=HTH-type transcriptional regulator AldR;locus_tag=GCA000153685_02913;product=HTH-type transcriptional regulator AldR;Dbxref=GO:0005829,GO:0043200,GO:0043565;gene=aldR;Parent=GCA000153685_02913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009939105.1,SO:0001217,UniParc:UPI0000165315,UniRef:UniRef100_A0A0E8VU32,UniRef:UniRef50_A0QVQ9,UniRef:UniRef90_O33321
contig_1	Pyrodigal	gene	3080880	3081995	.	+	.	ID=GCA000153685_02914_gene;locus_tag=GCA000153685_02914;gene=ald
contig_1	Pyrodigal	CDS	3080880	3081995	.	+	0	ID=GCA000153685_02914;Name=alanine dehydrogenase;locus_tag=GCA000153685_02914;product=alanine dehydrogenase;Dbxref=GO:0000166,GO:0000286,GO:0001666,GO:0005576,GO:0005829,GO:0005886,GO:0006524,GO:0009274,GO:0042853,GO:0046872;gene=ald;Parent=GCA000153685_02914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00259,RefSeq:WP_003899477.1,SO:0001217,UniParc:UPI00001292C2,UniRef:UniRef100_P9WQB1,UniRef:UniRef50_P9WQB1,UniRef:UniRef90_P9WQB1;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	3082010	3083044	.	-	.	ID=GCA000153685_02915_gene;locus_tag=GCA000153685_02915
contig_1	Pyrodigal	CDS	3082010	3083044	.	-	0	ID=GCA000153685_02915;Name=Propionate 3-nitronate monooxygenase;locus_tag=GCA000153685_02915;product=Propionate 3-nitronate monooxygenase;Parent=GCA000153685_02915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899478.1,SO:0001217,UniParc:UPI00000D5F18,UniRef:UniRef100_I6X5C5,UniRef:UniRef50_A0A2T8F5Z6,UniRef:UniRef90_A0A1X2LYR8
contig_1	Pyrodigal	gene	3083105	3084421	.	-	.	ID=GCA000153685_02916_gene;locus_tag=GCA000153685_02916
contig_1	Pyrodigal	CDS	3083105	3084421	.	-	0	ID=GCA000153685_02916;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000153685_02916;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0003723,GO:0004222,GO:0004654,GO:0005886,GO:0006396,GO:0006402,GO:0006508,GO:0046872;Parent=GCA000153685_02916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414119.1,SO:0001217,UniParc:UPI000013BF8B,UniRef:UniRef100_P9WHT5,UniRef:UniRef50_P9WHT5,UniRef:UniRef90_P9WHT5;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	3084399	3086873	.	-	.	ID=GCA000153685_02917_gene;locus_tag=GCA000153685_02917;gene=pnp
contig_1	Pyrodigal	CDS	3084399	3086873	.	-	0	ID=GCA000153685_02917;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000153685_02917;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0005886,GO:0006396,GO:0006401,GO:0006402,GO:0009274;gene=pnp;Parent=GCA000153685_02917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00962,SO:0001217,UniParc:UPI00032616B6,UniRef:UniRef100_P9WI57,UniRef:UniRef50_P9WI57,UniRef:UniRef90_P9WI57;ec_number=2.7.7.8
contig_1	Infernal	regulatory_region	3086768	3086838	7.3e-08	-	.	ID=FNJOPAJJMO_85;Name=Actino-pnp RNA;product=Actino-pnp RNA;Dbxref=RFAM:RF01688;inference=profile:Rfam:RF01688;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	3087011	3087526	.	-	.	ID=GCA000153685_02918_gene;locus_tag=GCA000153685_02918;gene=lppU
contig_1	Pyrodigal	CDS	3087011	3087526	.	-	0	ID=GCA000153685_02918;Name=Lipoprotein LppU;locus_tag=GCA000153685_02918;product=Lipoprotein LppU;gene=lppU;Parent=GCA000153685_02918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899480.1,SO:0001217,UniParc:UPI00000D0FB4,UniRef:UniRef100_A5U6D7,UniRef:UniRef50_A0A6N4VC42,UniRef:UniRef90_A0A8I0EQD9
contig_1	Pyrodigal	gene	3087539	3087808	.	-	.	ID=GCA000153685_02919_gene;locus_tag=GCA000153685_02919;gene=rpsO
contig_1	Pyrodigal	CDS	3087539	3087808	.	-	0	ID=GCA000153685_02919;Name=30S ribosomal protein S15;locus_tag=GCA000153685_02919;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0005886,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000153685_02919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414128.1,SO:0001217,UniParc:UPI0000134D14,UniRef:UniRef100_P9WH55,UniRef:UniRef50_P9WH55,UniRef:UniRef90_P9WH55
contig_1	Pyrodigal	gene	3087965	3088939	.	-	.	ID=GCA000153685_02920_gene;locus_tag=GCA000153685_02920;gene=ribF
contig_1	Pyrodigal	CDS	3087965	3088939	.	-	0	ID=GCA000153685_02920;Name=bifunctional riboflavin kinase/FAD synthetase;locus_tag=GCA000153685_02920;product=bifunctional riboflavin kinase/FAD synthetase;Dbxref=GO:0003919;gene=ribF;Parent=GCA000153685_02920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_003911989.1,SO:0001217,UniParc:UPI0001E6219E,UniRef:UniRef100_A0A0E7YAL6,UniRef:UniRef50_I6X5C9,UniRef:UniRef90_I6X5C9;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	3089171	3090934	.	+	.	ID=GCA000153685_02921_gene;locus_tag=GCA000153685_02921;gene=espI
contig_1	Pyrodigal	CDS	3089171	3090934	.	+	0	ID=GCA000153685_02921;Name=ESX-1 secretion-associated protein EspI;locus_tag=GCA000153685_02921;product=ESX-1 secretion-associated protein EspI;gene=espI;Parent=GCA000153685_02921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900573.1,SO:0001217,UniParc:UPI00012781F8,UniRef:UniRef100_A0A0H3LJP9,UniRef:UniRef50_A0A2I7WAK0,UniRef:UniRef90_A0A2I7WAK0
contig_1	Pyrodigal	gene	3091019	3091705	.	+	.	ID=GCA000153685_02922_gene;locus_tag=GCA000153685_02922;gene=mntR
contig_1	Pyrodigal	CDS	3091019	3091705	.	+	0	ID=GCA000153685_02922;Name=manganese-binding transcriptional regulator MntR;locus_tag=GCA000153685_02922;product=manganese-binding transcriptional regulator MntR;gene=mntR;Parent=GCA000153685_02922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414136,RefSeq:WP_003414136.1,SO:0001217,UniParc:UPI00000D5EC0,UniRef:UniRef100_I6Y1Q2,UniRef:UniRef50_I6Y1Q2,UniRef:UniRef90_I6Y1Q2
contig_1	Pyrodigal	gene	3091766	3092998	.	-	.	ID=GCA000153685_02923_gene;locus_tag=GCA000153685_02923
contig_1	Pyrodigal	CDS	3091766	3092998	.	-	0	ID=GCA000153685_02923;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_02923;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_02923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414139.1,SO:0001217,UniParc:UPI00000D5F5B,UniRef:UniRef100_A5U6E2,UniRef:UniRef50_A0A7K0DES1,UniRef:UniRef90_A0A0U0T874
contig_1	Pyrodigal	gene	3093024	3094229	.	-	.	ID=GCA000153685_02924_gene;locus_tag=GCA000153685_02924
contig_1	Pyrodigal	CDS	3093024	3094229	.	-	0	ID=GCA000153685_02924;Name=propanoyl-CoA C-acyltransferase;locus_tag=GCA000153685_02924;product=propanoyl-CoA C-acyltransferase;Parent=GCA000153685_02924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414142.1,SO:0001217,UniParc:UPI00000D3ACF,UniRef:UniRef100_O33332,UniRef:UniRef50_O33332,UniRef:UniRef90_O33332
contig_1	Pyrodigal	gene	3094262	3095641	.	-	.	ID=GCA000153685_02925_gene;locus_tag=GCA000153685_02925;gene=tnpB
contig_1	Pyrodigal	CDS	3094262	3095641	.	-	0	ID=GCA000153685_02925;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_02925;product=IS607 family element RNA-guided endonuclease TnpB;gene=tnpB;Parent=GCA000153685_02925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899482.1,SO:0001217,UniParc:UPI00000D7365,UniRef:UniRef100_A5U6E4,UniRef:UniRef50_P9WL37,UniRef:UniRef90_A5U6E4
contig_1	Pyrodigal	gene	3095641	3096222	.	-	.	ID=GCA000153685_02926_gene;locus_tag=GCA000153685_02926;gene=tnp
contig_1	Pyrodigal	CDS	3095641	3096222	.	-	0	ID=GCA000153685_02926;Name=IS607 family IS1602 transposase;locus_tag=GCA000153685_02926;product=IS607 family IS1602 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_02926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1602,RefSeq:WP_003414146.1,SO:0001217,UniParc:UPI00000D5E9E,UniRef:UniRef100_I6YA93,UniRef:UniRef50_A0A498PR97,UniRef:UniRef90_A0A2I7WAL8
contig_1	Pyrodigal	gene	3096424	3097320	.	-	.	ID=GCA000153685_02927_gene;locus_tag=GCA000153685_02927;gene=truB
contig_1	Pyrodigal	CDS	3096424	3097320	.	-	0	ID=GCA000153685_02927;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000153685_02927;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0006400,GO:0009274,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000153685_02927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414147.1,SO:0001217,UniParc:UPI00001376A2,UniRef:UniRef100_P9WHP7,UniRef:UniRef50_P9WHP7,UniRef:UniRef90_P9WHP7;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	3097317	3098000	.	-	.	ID=GCA000153685_02928_gene;locus_tag=GCA000153685_02928;gene=pptT
contig_1	Pyrodigal	CDS	3097317	3098000	.	-	0	ID=GCA000153685_02928;Name=4'-phosphopantetheinyl transferase;locus_tag=GCA000153685_02928;product=4'-phosphopantetheinyl transferase;gene=pptT;Parent=GCA000153685_02928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917055,KEGG:K02362,RefSeq:WP_003414149.1,SO:0001217,UniParc:UPI000016513D,UniRef:UniRef100_A0A1R3Y471,UniRef:UniRef50_A0A5S9R530,UniRef:UniRef90_A0A9P2H9Z3;ec_number=6.3.2.14
contig_1	Pyrodigal	gene	3097997	3098971	.	-	.	ID=GCA000153685_02929_gene;locus_tag=GCA000153685_02929;gene=pptH
contig_1	Pyrodigal	CDS	3097997	3098971	.	-	0	ID=GCA000153685_02929;Name=[Acyl-carrier-protein] phosphodiesterase PptH;locus_tag=GCA000153685_02929;product=[Acyl-carrier-protein] phosphodiesterase PptH;Dbxref=GO:0008770,GO:0046872;gene=pptH;Parent=GCA000153685_02929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_003414151.1,SO:0001217,UniParc:UPI00000D10F0,UniRef:UniRef100_I6YEE1,UniRef:UniRef50_I6YEE1,UniRef:UniRef90_I6YEE1;ec_number=3.1.4.14
contig_1	Pyrodigal	gene	3099116	3099679	.	-	.	ID=GCA000153685_02930_gene;locus_tag=GCA000153685_02930;gene=lppV
contig_1	Pyrodigal	CDS	3099116	3099679	.	-	0	ID=GCA000153685_02930;Name=Lipoprotein LppV;locus_tag=GCA000153685_02930;product=Lipoprotein LppV;gene=lppV;Parent=GCA000153685_02930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900574.1,SO:0001217,UniParc:UPI0000165317,UniRef:UniRef100_Q7D6K1,UniRef:UniRef50_A0AAD1GYQ2,UniRef:UniRef90_Q7D6K1
contig_1	Pyrodigal	gene	3099679	3101367	.	-	.	ID=GCA000153685_02931_gene;locus_tag=GCA000153685_02931
contig_1	Pyrodigal	CDS	3099679	3101367	.	-	0	ID=GCA000153685_02931;Name=DUF1023 domain-containing protein;locus_tag=GCA000153685_02931;product=DUF1023 domain-containing protein;Parent=GCA000153685_02931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414155.1,SO:0001217,UniParc:UPI00000CCBCE,UniRef:UniRef100_P71654,UniRef:UniRef50_P71654,UniRef:UniRef90_P71654
contig_1	Pyrodigal	gene	3101371	3101697	.	-	.	ID=GCA000153685_02932_gene;locus_tag=GCA000153685_02932
contig_1	Pyrodigal	CDS	3101371	3101697	.	-	0	ID=GCA000153685_02932;Name=WXG100 family type VII secretion target;locus_tag=GCA000153685_02932;product=WXG100 family type VII secretion target;Parent=GCA000153685_02932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414157.1,SO:0001217,UniParc:UPI00000C14E9,UniRef:UniRef100_P71653,UniRef:UniRef50_P71653,UniRef:UniRef90_P71653
contig_1	Pyrodigal	gene	3101870	3102457	.	+	.	ID=GCA000153685_02933_gene;locus_tag=GCA000153685_02933
contig_1	Pyrodigal	CDS	3101870	3102457	.	+	0	ID=GCA000153685_02933;Name=DUF3558 domain-containing protein;locus_tag=GCA000153685_02933;product=DUF3558 domain-containing protein;Parent=GCA000153685_02933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003914429.1,SO:0001217,UniParc:UPI00005F6343,UniRef:UniRef100_A0A0H3LCW1,UniRef:UniRef50_A0A1X1RTM3,UniRef:UniRef90_A0A0H3LCW1
contig_1	Pyrodigal	gene	3102476	3104125	.	+	.	ID=GCA000153685_02934_gene;locus_tag=GCA000153685_02934
contig_1	Pyrodigal	CDS	3102476	3104125	.	+	0	ID=GCA000153685_02934;Name=Cocaine esterase;locus_tag=GCA000153685_02934;product=Cocaine esterase;Parent=GCA000153685_02934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06978,RefSeq:WP_003900576.1,SO:0001217,UniParc:UPI0001277FA6,UniRef:UniRef100_A0A0E8TXC1,UniRef:UniRef50_A0A853CK53,UniRef:UniRef90_A0A0E8TXC1
contig_1	Pyrodigal	gene	3104227	3104580	.	-	.	ID=GCA000153685_02935_gene;locus_tag=GCA000153685_02935;gene=mazF9
contig_1	Pyrodigal	CDS	3104227	3104580	.	-	0	ID=GCA000153685_02935;Name=type II toxin-antitoxin system toxin endoribonuclease MazF9;locus_tag=GCA000153685_02935;product=type II toxin-antitoxin system toxin endoribonuclease MazF9;Dbxref=GO:0003677,GO:0004521,GO:0006402,GO:0016075,GO:0044003,GO:0045926;gene=mazF9;Parent=GCA000153685_02935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414166,SO:0001217,UniParc:UPI000016513F,UniRef:UniRef100_P71650,UniRef:UniRef50_P71650,UniRef:UniRef90_P71650;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3104567	3104785	.	-	.	ID=GCA000153685_02936_gene;locus_tag=GCA000153685_02936;gene=mazE9
contig_1	Pyrodigal	CDS	3104567	3104785	.	-	0	ID=GCA000153685_02936;Name=Antitoxin MazE9;locus_tag=GCA000153685_02936;product=Antitoxin MazE9;Dbxref=GO:0006355,GO:0045927,GO:0097351,GO:0098754;gene=mazE9;Parent=GCA000153685_02936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26989,SO:0001217,UniParc:UPI0001900D64,UniRef:UniRef100_A0A0H3LJR3,UniRef:UniRef50_P0CL61,UniRef:UniRef90_P0CL61
contig_1	Pyrodigal	gene	3104840	3105856	.	-	.	ID=GCA000153685_02937_gene;locus_tag=GCA000153685_02937
contig_1	Pyrodigal	CDS	3104840	3105856	.	-	0	ID=GCA000153685_02937;Name=DUF2293 domain-containing protein;locus_tag=GCA000153685_02937;product=DUF2293 domain-containing protein;Parent=GCA000153685_02937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D97D,UniRef:UniRef100_A0A0H3LCT1,UniRef:UniRef50_K0VBI8,UniRef:UniRef90_A0A0H3LCT1
contig_1	Pyrodigal	gene	3105882	3106349	.	+	.	ID=GCA000153685_02938_gene;locus_tag=GCA000153685_02938
contig_1	Pyrodigal	CDS	3105882	3106349	.	+	0	ID=GCA000153685_02938;Name=DUF1778 domain-containing protein;locus_tag=GCA000153685_02938;product=DUF1778 domain-containing protein;Parent=GCA000153685_02938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414177.1,SO:0001217,UniParc:UPI00000D2D10,UniRef:UniRef100_I6XFC2,UniRef:UniRef50_I6XFC2,UniRef:UniRef90_I6XFC2
contig_1	Pyrodigal	gene	3106525	3106782	.	-	.	ID=GCA000153685_02939_gene;locus_tag=GCA000153685_02939
contig_1	Pyrodigal	CDS	3106525	3106782	.	-	0	ID=GCA000153685_02939;Name=hypothetical protein;locus_tag=GCA000153685_02939;product=hypothetical protein;Parent=GCA000153685_02939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904928.1,SO:0001217,UniParc:UPI000169D97C,UniRef:UniRef100_A0A0E8VNX5,UniRef:UniRef50_A0A0E8VNX5,UniRef:UniRef90_A0A0E8VNX5
contig_1	Pyrodigal	gene	3106900	3107331	.	+	.	ID=GCA000153685_02940_gene;locus_tag=GCA000153685_02940
contig_1	Pyrodigal	CDS	3106900	3107331	.	+	0	ID=GCA000153685_02940;Name=Transposase;locus_tag=GCA000153685_02940;product=Transposase;Parent=GCA000153685_02940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE754,UniRef:UniRef100_P71646,UniRef:UniRef50_R4LY97,UniRef:UniRef90_R4LY97
contig_1	Pyrodigal	gene	3107328	3107519	.	+	.	ID=GCA000153685_02941_gene;locus_tag=GCA000153685_02941
contig_1	Pyrodigal	CDS	3107328	3107519	.	+	0	ID=GCA000153685_02941;Name=putative membrane protein;locus_tag=GCA000153685_02941;product=putative membrane protein;Parent=GCA000153685_02941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414184.1,SO:0001217,UniParc:UPI00000D1188,UniRef:UniRef100_I6YAA5,UniRef:UniRef50_A0A1A2UM32,UniRef:UniRef90_I6YAA5
contig_1	Pyrodigal	gene	3107721	3108872	.	+	.	ID=GCA000153685_02942_gene;locus_tag=GCA000153685_02942
contig_1	Pyrodigal	CDS	3107721	3108872	.	+	0	ID=GCA000153685_02942;Name=Integrase catalytic domain-containing protein;locus_tag=GCA000153685_02942;product=Integrase catalytic domain-containing protein;Parent=GCA000153685_02942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001AE51B4,UniRef:UniRef100_A0A0E8W6X3,UniRef:UniRef50_P71644,UniRef:UniRef90_P71644
contig_1	Pyrodigal	gene	3109148	3109363	.	+	.	ID=GCA000153685_02943_gene;locus_tag=GCA000153685_02943
contig_1	Pyrodigal	CDS	3109148	3109363	.	+	0	ID=GCA000153685_02943;Name=hypothetical protein;locus_tag=GCA000153685_02943;product=hypothetical protein;Parent=GCA000153685_02943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014588657.1,SO:0001217,UniParc:UPI0002569531,UniRef:UniRef100_A0A0E8VM66,UniRef:UniRef50_A0A1V3WAT3,UniRef:UniRef90_A0A498QQ71
contig_1	Pyrodigal	gene	3109468	3109779	.	+	.	ID=GCA000153685_02944_gene;locus_tag=GCA000153685_02944
contig_1	Pyrodigal	CDS	3109468	3109779	.	+	0	ID=GCA000153685_02944;Name=hypothetical protein;locus_tag=GCA000153685_02944;product=hypothetical protein;Parent=GCA000153685_02944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414190.1,SO:0001217,UniParc:UPI00000D1016,UniRef:UniRef100_I6YEF3,UniRef:UniRef50_I6YEF3,UniRef:UniRef90_I6YEF3
contig_1	Pyrodigal	gene	3110199	3110807	.	+	.	ID=GCA000153685_02945_gene;locus_tag=GCA000153685_02945
contig_1	Pyrodigal	CDS	3110199	3110807	.	+	0	ID=GCA000153685_02945;Name=Sigma-70 family RNA polymerase sigma factor;locus_tag=GCA000153685_02945;product=Sigma-70 family RNA polymerase sigma factor;Parent=GCA000153685_02945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414195.1,SO:0001217,UniParc:UPI00000C14E8,UniRef:UniRef100_P71640,UniRef:UniRef50_A0A081HXQ0,UniRef:UniRef90_P71640
contig_1	Pyrodigal	gene	3110878	3112287	.	+	.	ID=GCA000153685_02946_gene;locus_tag=GCA000153685_02946
contig_1	Pyrodigal	CDS	3110878	3112287	.	+	0	ID=GCA000153685_02946;Name=Transposase;locus_tag=GCA000153685_02946;product=Transposase;Parent=GCA000153685_02946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414198.1,SO:0001217,UniParc:UPI0000165141,UniRef:UniRef100_A0A0H3LCW9,UniRef:UniRef50_A0A2R4SVY7,UniRef:UniRef90_A5U6G5
contig_1	Pyrodigal	gene	3112284	3113096	.	+	.	ID=GCA000153685_02947_gene;locus_tag=GCA000153685_02947
contig_1	Pyrodigal	CDS	3112284	3113096	.	+	0	ID=GCA000153685_02947;Name=ORC1/DEAH AAA+ ATPase domain-containing protein;locus_tag=GCA000153685_02947;product=ORC1/DEAH AAA+ ATPase domain-containing protein;Parent=GCA000153685_02947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899491.1,SO:0001217,UniParc:UPI00000D5EB2,UniRef:UniRef100_I6XFD1,UniRef:UniRef50_I6XFD1,UniRef:UniRef90_I6XFD1
contig_1	PILER-CR	repeat_region	3113245	3114054	.	?	.	ID=FNJOPAJJMO_88;Name=CRISPR array with 11 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;product=CRISPR array with 11 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;inference=COORDINATES:alignment:pilercr:1.02;Note=SO:0001459;rpt_family=CRISPR;rpt_type=direct;rpt_unit_seq=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC
contig_1	Pyrodigal	gene	3114130	3115014	.	-	.	ID=GCA000153685_02948_gene;locus_tag=GCA000153685_02948;gene=tnp
contig_1	Pyrodigal	CDS	3114130	3115014	.	-	0	ID=GCA000153685_02948;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_02948;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_02948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	3115065	3115391	.	-	.	ID=GCA000153685_02949_gene;locus_tag=GCA000153685_02949;gene=tnp
contig_1	Pyrodigal	CDS	3115065	3115391	.	-	0	ID=GCA000153685_02949;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_02949;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_02949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	PILER-CR	repeat_region	3115486	3115921	.	?	.	ID=FNJOPAJJMO_89;Name=CRISPR array with 6 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;product=CRISPR array with 6 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;inference=COORDINATES:alignment:pilercr:1.02;Note=SO:0001459;rpt_family=CRISPR;rpt_type=direct;rpt_unit_seq=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC
contig_1	Pyrodigal	gene	3115984	3116868	.	-	.	ID=GCA000153685_02950_gene;locus_tag=GCA000153685_02950;gene=tnp
contig_1	Pyrodigal	CDS	3115984	3116868	.	-	0	ID=GCA000153685_02950;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_02950;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_02950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	3116919	3117245	.	-	.	ID=GCA000153685_02951_gene;locus_tag=GCA000153685_02951;gene=tnp
contig_1	Pyrodigal	CDS	3116919	3117245	.	-	0	ID=GCA000153685_02951;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_02951;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_02951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	PILER-CR	repeat_region	3117356	3119084	.	?	.	ID=FNJOPAJJMO_90;Name=CRISPR array with 24 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;product=CRISPR array with 24 repeats of length 36%2C consensus sequence GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC and spacer length 37;inference=COORDINATES:alignment:pilercr:1.02;Note=SO:0001459;rpt_family=CRISPR;rpt_type=direct;rpt_unit_seq=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC
contig_1	Pyrodigal	gene	3119123	3119464	.	-	.	ID=GCA000153685_02952_gene;locus_tag=GCA000153685_02952;gene=cas2
contig_1	Pyrodigal	CDS	3119123	3119464	.	-	0	ID=GCA000153685_02952;Name=CRISPR-associated endonuclease Cas2;locus_tag=GCA000153685_02952;product=CRISPR-associated endonuclease Cas2;Dbxref=GO:0004521,GO:0043571,GO:0046872,GO:0051607;gene=cas2;Parent=GCA000153685_02952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414276.1,SO:0001217,UniParc:UPI00000D10B2,UniRef:UniRef100_P9WPJ3,UniRef:UniRef50_P9WPJ3,UniRef:UniRef90_P9WPJ3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3119465	3120481	.	-	.	ID=GCA000153685_02953_gene;locus_tag=GCA000153685_02953;gene=cas1
contig_1	Pyrodigal	CDS	3119465	3120481	.	-	0	ID=GCA000153685_02953;Name=CRISPR-associated endonuclease Cas1;locus_tag=GCA000153685_02953;product=CRISPR-associated endonuclease Cas1;Dbxref=GO:0003677,GO:0004519,GO:0004520,GO:0009274,GO:0043571,GO:0046872,GO:0051607;gene=cas1;Parent=GCA000153685_02953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414279.1,SO:0001217,UniParc:UPI00000D1068,UniRef:UniRef100_P9WPJ5,UniRef:UniRef50_P9WPJ5,UniRef:UniRef90_P9WPJ5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3120494	3121741	.	-	.	ID=GCA000153685_02954_gene;locus_tag=GCA000153685_02954;gene=csm6
contig_1	Pyrodigal	CDS	3120494	3121741	.	-	0	ID=GCA000153685_02954;Name=type III-A CRISPR-associated CARF protein Csm6;locus_tag=GCA000153685_02954;product=type III-A CRISPR-associated CARF protein Csm6;Dbxref=GO:0004519,GO:0043571,GO:0051607;gene=csm6;Parent=GCA000153685_02954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899494.1,SO:0001217,UniParc:UPI00005EE757,UniRef:UniRef100_P71635,UniRef:UniRef50_P71635,UniRef:UniRef90_P71635;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3121738	3122865	.	-	.	ID=GCA000153685_02955_gene;locus_tag=GCA000153685_02955;gene=csm5
contig_1	Pyrodigal	CDS	3121738	3122865	.	-	0	ID=GCA000153685_02955;Name=type III-A CRISPR-associated RAMP protein Csm5;locus_tag=GCA000153685_02955;product=type III-A CRISPR-associated RAMP protein Csm5;Dbxref=GO:0003723,GO:0005829,GO:0005886,GO:0043571,GO:0051607;gene=csm5;Parent=GCA000153685_02955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19140,RefSeq:WP_003414285.1,SO:0001217,UniParc:UPI00000D0F90,UniRef:UniRef100_P9WJF5,UniRef:UniRef50_P9WJF5,UniRef:UniRef90_P9WJF5
contig_1	Pyrodigal	gene	3122862	3123770	.	-	.	ID=GCA000153685_02956_gene;locus_tag=GCA000153685_02956;gene=csm4
contig_1	Pyrodigal	CDS	3122862	3123770	.	-	0	ID=GCA000153685_02956;Name=type III-A CRISPR-associated RAMP protein Csm4;locus_tag=GCA000153685_02956;product=type III-A CRISPR-associated RAMP protein Csm4;Dbxref=GO:0003723,GO:0043571,GO:0051607;gene=csm4;Parent=GCA000153685_02956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19139,RefSeq:WP_003414288.1,SO:0001217,UniParc:UPI00000D1063,UniRef:UniRef100_P9WJF7,UniRef:UniRef50_P9WJF7,UniRef:UniRef90_P9WJF7
contig_1	Pyrodigal	gene	3123751	3124461	.	-	.	ID=GCA000153685_02957_gene;locus_tag=GCA000153685_02957;gene=csm3
contig_1	Pyrodigal	CDS	3123751	3124461	.	-	0	ID=GCA000153685_02957;Name=type III-A CRISPR-associated RAMP protein Csm3;locus_tag=GCA000153685_02957;product=type III-A CRISPR-associated RAMP protein Csm3;Dbxref=GO:0003723,GO:0004519,GO:0043571,GO:0051607;gene=csm3;Parent=GCA000153685_02957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414292.1,SO:0001217,UniParc:UPI00000D0F5F,UniRef:UniRef100_P9WJF9,UniRef:UniRef50_A0A0A7HIF0,UniRef:UniRef90_P9WJF9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3124471	3124845	.	-	.	ID=GCA000153685_02958_gene;locus_tag=GCA000153685_02958;gene=csm2
contig_1	Pyrodigal	CDS	3124471	3124845	.	-	0	ID=GCA000153685_02958;Name=CRISPR system Cms protein Csm2;locus_tag=GCA000153685_02958;product=CRISPR system Cms protein Csm2;Dbxref=GO:0003723,GO:0051607;gene=csm2;Parent=GCA000153685_02958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19138,RefSeq:WP_003414296.1,SO:0001217,UniParc:UPI00000D1094,UniRef:UniRef100_P9WJG1,UniRef:UniRef50_P9WJG1,UniRef:UniRef90_P9WJG1
contig_1	Pyrodigal	gene	3124842	3127295	.	-	.	ID=GCA000153685_02959_gene;locus_tag=GCA000153685_02959;gene=cas10
contig_1	Pyrodigal	CDS	3124842	3127295	.	-	0	ID=GCA000153685_02959;Name=type III-A CRISPR-associated protein Cas10/Csm1;locus_tag=GCA000153685_02959;product=type III-A CRISPR-associated protein Cas10/Csm1;Dbxref=GO:0003723,GO:0004519,GO:0004527,GO:0005524,GO:0005576,GO:0005886,GO:0016740,GO:0043571,GO:0051607;gene=cas10;Parent=GCA000153685_02959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07016,SO:0001217,UniParc:UPI00000D2D17,UniRef:UniRef100_Q8VJC5,UniRef:UniRef50_P71629,UniRef:UniRef90_P71629;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3127277	3128065	.	-	.	ID=GCA000153685_02960_gene;locus_tag=GCA000153685_02960;gene=cas6
contig_1	Pyrodigal	CDS	3127277	3128065	.	-	0	ID=GCA000153685_02960;Name=CRISPR-associated endoribonuclease Cas6;locus_tag=GCA000153685_02960;product=CRISPR-associated endoribonuclease Cas6;Dbxref=GO:0003723,GO:0004519,GO:0004521,GO:0043571,GO:0051607;gene=cas6;Parent=GCA000153685_02960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19091,RefSeq:WP_003917092.1,SO:0001217,UniParc:UPI0001E62B16,UniRef:UniRef100_A0A0H3LCY5,UniRef:UniRef50_P9WPJ1,UniRef:UniRef90_P9WPJ1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3128399	3129046	.	-	.	ID=GCA000153685_02961_gene;locus_tag=GCA000153685_02961
contig_1	Pyrodigal	CDS	3128399	3129046	.	-	0	ID=GCA000153685_02961;Name=DUF1802 domain-containing protein;locus_tag=GCA000153685_02961;product=DUF1802 domain-containing protein;Parent=GCA000153685_02961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A24D,UniRef:UniRef100_Q8VJC4,UniRef:UniRef50_A0A9W5TSB2,UniRef:UniRef90_P71627
contig_1	Pyrodigal	gene	3129216	3130100	.	-	.	ID=GCA000153685_02962_gene;locus_tag=GCA000153685_02962
contig_1	Pyrodigal	CDS	3129216	3130100	.	-	0	ID=GCA000153685_02962;Name=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;locus_tag=GCA000153685_02962;product=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;Parent=GCA000153685_02962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09144,RefSeq:WP_003414409.1,SO:0001217,UniParc:UPI000016531B,UniRef:UniRef100_P71626,UniRef:UniRef50_P71626,UniRef:UniRef90_P71626
contig_1	Pyrodigal	gene	3130103	3130990	.	-	.	ID=GCA000153685_02963_gene;locus_tag=GCA000153685_02963
contig_1	Pyrodigal	CDS	3130103	3130990	.	-	0	ID=GCA000153685_02963;Name=AbiEi antitoxin C-terminal domain-containing protein;locus_tag=GCA000153685_02963;product=AbiEi antitoxin C-terminal domain-containing protein;Parent=GCA000153685_02963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414414.1,SO:0001217,UniParc:UPI000016531C,UniRef:UniRef100_P71625,UniRef:UniRef50_A0A7V8X2N5,UniRef:UniRef90_Q7D6H9
contig_1	Pyrodigal	gene	3131295	3131840	.	-	.	ID=GCA000153685_02964_gene;locus_tag=GCA000153685_02964
contig_1	Pyrodigal	CDS	3131295	3131840	.	-	0	ID=GCA000153685_02964;Name=DUF1802 domain-containing protein;locus_tag=GCA000153685_02964;product=DUF1802 domain-containing protein;Parent=GCA000153685_02964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899500.1,SO:0001217,UniParc:UPI00000D0F88,UniRef:UniRef100_I6X5G8,UniRef:UniRef50_A0A9W5TSB2,UniRef:UniRef90_I6X5G8
contig_1	Pyrodigal	gene	3131837	3132106	.	-	.	ID=GCA000153685_02965_gene;locus_tag=GCA000153685_02965
contig_1	Pyrodigal	CDS	3131837	3132106	.	-	0	ID=GCA000153685_02965;Name=DUF2277 domain-containing protein;locus_tag=GCA000153685_02965;product=DUF2277 domain-containing protein;Parent=GCA000153685_02965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912856.1,SO:0001217,UniParc:UPI000169A24F,UniRef:UniRef100_A0A1K2Q210,UniRef:UniRef50_Q5Z0N5,UniRef:UniRef90_A0A8I0EQC3
contig_1	Pyrodigal	gene	3132127	3132519	.	-	.	ID=GCA000153685_02966_gene;locus_tag=GCA000153685_02966;gene=vapC22
contig_1	Pyrodigal	CDS	3132127	3132519	.	-	0	ID=GCA000153685_02966;Name=Ribonuclease VapC22;locus_tag=GCA000153685_02966;product=Ribonuclease VapC22;Dbxref=GO:0000287,GO:0004540,GO:0005576,GO:0017148;gene=vapC22;Parent=GCA000153685_02966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414492.1,SO:0001217,UniParc:UPI00000C14A3,UniRef:UniRef100_P71623,UniRef:UniRef50_P71623,UniRef:UniRef90_P71623;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3132516	3132743	.	-	.	ID=GCA000153685_02967_gene;locus_tag=GCA000153685_02967;gene=vapB22
contig_1	Pyrodigal	CDS	3132516	3132743	.	-	0	ID=GCA000153685_02967;Name=Antitoxin VapB22;locus_tag=GCA000153685_02967;product=Antitoxin VapB22;Dbxref=GO:0045727;gene=vapB22;Parent=GCA000153685_02967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E6228C,UniRef:UniRef100_A0A1R3Y2D2,UniRef:UniRef50_P71622,UniRef:UniRef90_P71622
contig_1	Pyrodigal	gene	3132778	3133527	.	+	.	ID=GCA000153685_02968_gene;locus_tag=GCA000153685_02968
contig_1	Pyrodigal	CDS	3132778	3133527	.	+	0	ID=GCA000153685_02968;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_02968;product=enoyl-CoA hydratase;Dbxref=GO:0003824;Parent=GCA000153685_02968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414497.1,SO:0001217,UniParc:UPI00000D5E39,UniRef:UniRef100_A5U6I3,UniRef:UniRef50_A0A0N9XIJ8,UniRef:UniRef90_A0A5R1Z6C3;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	3133606	3134688	.	-	.	ID=GCA000153685_02969_gene;locus_tag=GCA000153685_02969
contig_1	Pyrodigal	CDS	3133606	3134688	.	-	0	ID=GCA000153685_02969;Name=Sn-glycerol-3-phosphate transport ATP-binding protein ABC transporter UGPC;locus_tag=GCA000153685_02969;product=Sn-glycerol-3-phosphate transport ATP-binding protein ABC transporter UGPC;Parent=GCA000153685_02969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414499.1,SO:0001217,UniParc:UPI00000D5EA9,UniRef:UniRef100_A5U6I4,UniRef:UniRef50_A0A143Q365,UniRef:UniRef90_A0A655JB85
contig_1	Pyrodigal	gene	3134681	3135991	.	-	.	ID=GCA000153685_02970_gene;locus_tag=GCA000153685_02970;gene=uspB
contig_1	Pyrodigal	CDS	3134681	3135991	.	-	0	ID=GCA000153685_02970;Name=Sn-glycerol-3-phosphate ABC transporter substrate-binding protein UspB;locus_tag=GCA000153685_02970;product=Sn-glycerol-3-phosphate ABC transporter substrate-binding protein UspB;gene=uspB;Parent=GCA000153685_02970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414501.1,SO:0001217,UniParc:UPI00000CCBC7,UniRef:UniRef100_A5U6I5,UniRef:UniRef50_U7L6M5,UniRef:UniRef90_A5U6I5
contig_1	Pyrodigal	gene	3135994	3136779	.	-	.	ID=GCA000153685_02971_gene;locus_tag=GCA000153685_02971;gene=ugpE
contig_1	Pyrodigal	CDS	3135994	3136779	.	-	0	ID=GCA000153685_02971;Name=Sn-glycerol-3-phosphate ABC transporter permease protein UgpE;locus_tag=GCA000153685_02971;product=Sn-glycerol-3-phosphate ABC transporter permease protein UgpE;gene=ugpE;Parent=GCA000153685_02971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62B1B,UniRef:UniRef100_A5U6I6,UniRef:UniRef50_I7IXE2,UniRef:UniRef90_A5U6I6
contig_1	Pyrodigal	gene	3136818	3137729	.	-	.	ID=GCA000153685_02972_gene;locus_tag=GCA000153685_02972;gene=ugpA
contig_1	Pyrodigal	CDS	3136818	3137729	.	-	0	ID=GCA000153685_02972;Name=Sn-glycerol-3-phosphate ABC transporter permease protein UgpA;locus_tag=GCA000153685_02972;product=Sn-glycerol-3-phosphate ABC transporter permease protein UgpA;gene=ugpA;Parent=GCA000153685_02972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414505.1,SO:0001217,UniParc:UPI00000D602D,UniRef:UniRef100_A5U6I7,UniRef:UniRef50_S2Z2F1,UniRef:UniRef90_A5U6I7
contig_1	Pyrodigal	gene	3137816	3139126	.	-	.	ID=GCA000153685_02973_gene;locus_tag=GCA000153685_02973
contig_1	Pyrodigal	CDS	3137816	3139126	.	-	0	ID=GCA000153685_02973;Name=DNA-damage-inducible protein F%2C putative;locus_tag=GCA000153685_02973;product=DNA-damage-inducible protein F%2C putative;Parent=GCA000153685_02973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165144,UniRef:UniRef100_Q7D6H3,UniRef:UniRef50_A0A2R4FJ05,UniRef:UniRef90_Q7D6H3
contig_1	Pyrodigal	gene	3139142	3140152	.	-	.	ID=GCA000153685_02974_gene;locus_tag=GCA000153685_02974;gene=nrnA
contig_1	Pyrodigal	CDS	3139142	3140152	.	-	0	ID=GCA000153685_02974;Name=bifunctional oligoribonuclease/PAP phosphatase NrnA;locus_tag=GCA000153685_02974;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;Dbxref=GO:0003676,GO:0004527,GO:0008441;gene=nrnA;Parent=GCA000153685_02974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414507,KEGG:K06881,RefSeq:WP_003414507.1,SO:0001217,UniParc:UPI00000D4FFD,UniRef:UniRef100_P71615,UniRef:UniRef50_P71615,UniRef:UniRef90_P71615;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	3140127	3140678	.	-	.	ID=GCA000153685_02975_gene;locus_tag=GCA000153685_02975;gene=rbfA
contig_1	Pyrodigal	CDS	3140127	3140678	.	-	0	ID=GCA000153685_02975;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000153685_02975;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0042254,GO:0043024;gene=rbfA;Parent=GCA000153685_02975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414508.1,SO:0001217,UniParc:UPI00001331B3,UniRef:UniRef100_P9WHJ7,UniRef:UniRef50_P9WHJ7,UniRef:UniRef90_P9WHJ7
contig_1	Pyrodigal	gene	3140678	3143380	.	-	.	ID=GCA000153685_02976_gene;locus_tag=GCA000153685_02976;gene=infB
contig_1	Pyrodigal	CDS	3140678	3143380	.	-	0	ID=GCA000153685_02976;Name=translation initiation factor IF-2;locus_tag=GCA000153685_02976;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413;gene=infB;Parent=GCA000153685_02976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02519,RefSeq:WP_003899505.1,SO:0001217,UniParc:UPI000012D2E2,UniRef:UniRef100_P9WKK1,UniRef:UniRef50_P9WKK1,UniRef:UniRef90_P9WKK1
contig_1	Pyrodigal	gene	3143892	3144935	.	-	.	ID=GCA000153685_02977_gene;locus_tag=GCA000153685_02977;gene=nusA
contig_1	Pyrodigal	CDS	3143892	3144935	.	-	0	ID=GCA000153685_02977;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA000153685_02977;product=Transcription termination/antitermination protein NusA;Dbxref=GO:0003700,GO:0003723,GO:0005829,GO:0005886,GO:0006353,GO:0009274,GO:0031564;gene=nusA;Parent=GCA000153685_02977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0195,COG:K,RefSeq:WP_003414511.1,SO:0001217,UniParc:UPI0000130A43,UniRef:UniRef100_P9WIV3,UniRef:UniRef50_P9WIV3,UniRef:UniRef90_P9WIV3
contig_1	Pyrodigal	gene	3144932	3145483	.	-	.	ID=GCA000153685_02978_gene;locus_tag=GCA000153685_02978;gene=rimP
contig_1	Pyrodigal	CDS	3144932	3145483	.	-	0	ID=GCA000153685_02978;Name=ribosome maturation factor RimP;locus_tag=GCA000153685_02978;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000153685_02978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899507.1,SO:0001217,UniParc:UPI000013C050,UniRef:UniRef100_P9WH17,UniRef:UniRef50_P9WH17,UniRef:UniRef90_P9WH17
contig_1	Pyrodigal	gene	3145738	3146223	.	+	.	ID=GCA000153685_02979_gene;locus_tag=GCA000153685_02979
contig_1	Pyrodigal	CDS	3145738	3146223	.	+	0	ID=GCA000153685_02979;Name=Conserved alanine rich transmembrane protein;locus_tag=GCA000153685_02979;product=Conserved alanine rich transmembrane protein;Parent=GCA000153685_02979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE75D,UniRef:UniRef100_A0A0H3LE44,UniRef:UniRef50_A0A1A2AP28,UniRef:UniRef90_A5U6J5
contig_1	Pyrodigal	gene	3146220	3146708	.	+	.	ID=GCA000153685_02980_gene;locus_tag=GCA000153685_02980
contig_1	Pyrodigal	CDS	3146220	3146708	.	+	0	ID=GCA000153685_02980;Name=DUF4439 domain-containing protein;locus_tag=GCA000153685_02980;product=DUF4439 domain-containing protein;Parent=GCA000153685_02980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414522.1,SO:0001217,UniParc:UPI00000D0F3E,UniRef:UniRef100_I6Y1V1,UniRef:UniRef50_A0A2I7WAR9,UniRef:UniRef90_A0A2I7WAR9
contig_1	Pyrodigal	gene	3146709	3148589	.	-	.	ID=GCA000153685_02981_gene;locus_tag=GCA000153685_02981;gene=proS
contig_1	Pyrodigal	CDS	3146709	3148589	.	-	0	ID=GCA000153685_02981;Name=proline--tRNA ligase;locus_tag=GCA000153685_02981;product=proline--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524,GO:0005829,GO:0005886,GO:0006418,GO:0006433,GO:0009274;gene=proS;Parent=GCA000153685_02981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000321A0D1,UniRef:UniRef100_A0A0E8VCR2,UniRef:UniRef50_P9WFT9,UniRef:UniRef90_P9WFT9;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	3148546	3150138	.	-	.	ID=GCA000153685_02982_gene;locus_tag=GCA000153685_02982;gene=efpA
contig_1	Pyrodigal	CDS	3148546	3150138	.	-	0	ID=GCA000153685_02982;Name=multidrug efflux MFS transporter EfpA;locus_tag=GCA000153685_02982;product=multidrug efflux MFS transporter EfpA;Dbxref=GO:0005886,GO:0016020,GO:0022857;gene=efpA;Parent=GCA000153685_02982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414532,COG:COG2814,COG:G,RefSeq:WP_003414532.1,SO:0001217,UniParc:UPI00000D0F62,UniRef:UniRef100_P9WJY5,UniRef:UniRef50_P9WJY5,UniRef:UniRef90_P9WJY5
contig_1	Pyrodigal	gene	3150161	3151378	.	-	.	ID=GCA000153685_02983_gene;locus_tag=GCA000153685_02983
contig_1	Pyrodigal	CDS	3150161	3151378	.	-	0	ID=GCA000153685_02983;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000153685_02983;product=uroporphyrinogen-III C-methyltransferase;Parent=GCA000153685_02983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02302,RefSeq:WP_003414535.1,SO:0001217,UniParc:UPI00000D119F,UniRef:UniRef100_I6X5I7,UniRef:UniRef50_A0A4Q4DBM8,UniRef:UniRef90_I6X5I7;ec_number=4.99.1.4
contig_1	Pyrodigal	gene	3151655	3153028	.	-	.	ID=GCA000153685_02984_gene;locus_tag=GCA000153685_02984;gene=cobB
contig_1	Pyrodigal	CDS	3151655	3153028	.	-	0	ID=GCA000153685_02984;Name=cobyrinate a%2Cc-diamide synthase;locus_tag=GCA000153685_02984;product=cobyrinate a%2Cc-diamide synthase;Dbxref=GO:0005524,GO:0005886,GO:0009236,GO:0042242,GO:0043802;gene=cobB;Parent=GCA000153685_02984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899509.1,SO:0001217,UniParc:UPI0000127DCA,UniRef:UniRef100_P9WP97,UniRef:UniRef50_P9WP97,UniRef:UniRef90_P9WP97;ec_number=6.3.5.9
contig_1	Pyrodigal	gene	3153028	3153651	.	-	.	ID=GCA000153685_02985_gene;locus_tag=GCA000153685_02985;gene=cobO
contig_1	Pyrodigal	CDS	3153028	3153651	.	-	0	ID=GCA000153685_02985;Name=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;locus_tag=GCA000153685_02985;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;Dbxref=GO:0008817,GO:0009236;gene=cobO;Parent=GCA000153685_02985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19221,RefSeq:WP_003414539.1,SO:0001217,UniParc:UPI00000D10EE,UniRef:UniRef100_A5U6K1,UniRef:UniRef50_A0A399FYV2,UniRef:UniRef90_R4M966;ec_number=2.5.1.17
contig_1	Pyrodigal	gene	3153672	3155492	.	-	.	ID=GCA000153685_02986_gene;locus_tag=GCA000153685_02986
contig_1	Pyrodigal	CDS	3153672	3155492	.	-	0	ID=GCA000153685_02986;Name=putative protein Rv2850c;locus_tag=GCA000153685_02986;product=putative protein Rv2850c;Dbxref=GO:0005524,GO:0016887;Parent=GCA000153685_02986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03404,SO:0001217,UniParc:UPI00005F634D,UniRef:UniRef100_A0A0H3LCW0,UniRef:UniRef50_P9WPR3,UniRef:UniRef90_P9WPR3;ec_number=6.6.1.1
contig_1	Pyrodigal	gene	3155556	3156026	.	-	.	ID=GCA000153685_02987_gene;locus_tag=GCA000153685_02987
contig_1	Pyrodigal	CDS	3155556	3156026	.	-	0	ID=GCA000153685_02987;Name=UPF0039 protein Mb2876c;locus_tag=GCA000153685_02987;product=UPF0039 protein Mb2876c;Dbxref=GO:0016747;Parent=GCA000153685_02987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02348,RefSeq:WP_003414543.1,SO:0001217,UniParc:UPI000013C05B,UniRef:UniRef100_P9WFQ5,UniRef:UniRef50_P9WFQ5,UniRef:UniRef90_P9WFQ5
contig_1	Pyrodigal	gene	3156085	3157566	.	-	.	ID=GCA000153685_02988_gene;locus_tag=GCA000153685_02988;gene=mqo
contig_1	Pyrodigal	CDS	3156085	3157566	.	-	0	ID=GCA000153685_02988;Name=malate dehydrogenase (quinone);locus_tag=GCA000153685_02988;product=malate dehydrogenase (quinone);Dbxref=GO:0005737,GO:0005886,GO:0006099,GO:0008924;gene=mqo;Parent=GCA000153685_02988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00116,RefSeq:WP_003414545.1,SO:0001217,UniParc:UPI000012F4CC,UniRef:UniRef100_P9WJP5,UniRef:UniRef50_A0QVL2,UniRef:UniRef90_P9WJP5;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	3157773	3159620	.	+	.	ID=GCA000153685_02989_gene;locus_tag=GCA000153685_02989
contig_1	Pyrodigal	CDS	3157773	3159620	.	+	0	ID=GCA000153685_02989;Name=PE domain-containing protein;locus_tag=GCA000153685_02989;product=PE domain-containing protein;Parent=GCA000153685_02989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938581.1,SO:0001217,UniParc:UPI0001DD0286,UniRef:UniRef100_A0A0H3LE53,UniRef:UniRef50_A0A829C6X6,UniRef:UniRef90_A0A829C6X6
contig_1	Pyrodigal	gene	3159657	3160697	.	+	.	ID=GCA000153685_02990_gene;locus_tag=GCA000153685_02990
contig_1	Pyrodigal	CDS	3159657	3160697	.	+	0	ID=GCA000153685_02990;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000153685_02990;product=Serine aminopeptidase S33 domain-containing protein;Parent=GCA000153685_02990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414553.1,SO:0001217,UniParc:UPI00000CCAE2,UniRef:UniRef100_O05805,UniRef:UniRef50_O05805,UniRef:UniRef90_O05805
contig_1	Pyrodigal	gene	3160710	3162089	.	+	.	ID=GCA000153685_02991_gene;locus_tag=GCA000153685_02991;gene=mtr
contig_1	Pyrodigal	CDS	3160710	3162089	.	+	0	ID=GCA000153685_02991;Name=mycothione reductase;locus_tag=GCA000153685_02991;product=mycothione reductase;Dbxref=GO:0004148,GO:0005829,GO:0006090,GO:0006103,GO:0010126,GO:0050627,GO:0050660,GO:0070402;gene=mtr;Parent=GCA000153685_02991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K17883,RefSeq:WP_003414557.1,SO:0001217,UniParc:UPI00000D5FF3,UniRef:UniRef100_P9WHH3,UniRef:UniRef50_P9WHH3,UniRef:UniRef90_P9WHH3;ec_number=1.8.1.15
contig_1	Pyrodigal	gene	3162189	3163307	.	+	.	ID=GCA000153685_02992_gene;locus_tag=GCA000153685_02992;gene=nicT
contig_1	Pyrodigal	CDS	3162189	3163307	.	+	0	ID=GCA000153685_02992;Name=Nickel transporter NicT;locus_tag=GCA000153685_02992;product=Nickel transporter NicT;Dbxref=GO:0005886,GO:0015099,GO:0046677;gene=nicT;Parent=GCA000153685_02992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07241,RefSeq:WP_003414559.1,SO:0001217,UniParc:UPI00000D6023,UniRef:UniRef100_I6YEJ7,UniRef:UniRef50_I6YEJ7,UniRef:UniRef90_I6YEJ7
contig_1	Pyrodigal	gene	3163373	3163705	.	+	.	ID=GCA000153685_02993_gene;locus_tag=GCA000153685_02993
contig_1	Pyrodigal	CDS	3163373	3163705	.	+	0	ID=GCA000153685_02993;Name=CobW/HypB/UreG nucleotide-binding domain-containing protein;locus_tag=GCA000153685_02993;product=CobW/HypB/UreG nucleotide-binding domain-containing protein;Parent=GCA000153685_02993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414562.1,SO:0001217,UniParc:UPI00005EE764,UniRef:UniRef100_A5U6K9,UniRef:UniRef50_A5U6K9,UniRef:UniRef90_A5U6K9
contig_1	Pyrodigal	gene	3163717	3163932	.	+	.	ID=GCA000153685_02994_gene;locus_tag=GCA000153685_02994
contig_1	Pyrodigal	CDS	3163717	3163932	.	+	0	ID=GCA000153685_02994;Name=Truncated hydrogenase nickel incorporation protein;locus_tag=GCA000153685_02994;product=Truncated hydrogenase nickel incorporation protein;Parent=GCA000153685_02994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414566.1,SO:0001217,UniParc:UPI00005EE765,UniRef:UniRef100_A5U6L0,UniRef:UniRef50_A0A655A5D2,UniRef:UniRef90_A0A655A5D2
contig_1	Pyrodigal	gene	3164088	3164861	.	-	.	ID=GCA000153685_02995_gene;locus_tag=GCA000153685_02995
contig_1	Pyrodigal	CDS	3164088	3164861	.	-	0	ID=GCA000153685_02995;Name=3-oxoacyl-ACP reductase;locus_tag=GCA000153685_02995;product=3-oxoacyl-ACP reductase;Dbxref=GO:0016491;Parent=GCA000153685_02995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5S9R7I3,UniRef:UniRef90_A5U6L1;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	3164861	3166228	.	-	.	ID=GCA000153685_02996_gene;locus_tag=GCA000153685_02996
contig_1	Pyrodigal	CDS	3164861	3166228	.	-	0	ID=GCA000153685_02996;Name=Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2;locus_tag=GCA000153685_02996;product=Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2;Parent=GCA000153685_02996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07010,RefSeq:WP_003900585.1,SO:0001217,UniParc:UPI00000D4F6D,UniRef:UniRef100_O33340,UniRef:UniRef50_O33340,UniRef:UniRef90_O33340
contig_1	Pyrodigal	gene	3166225	3166953	.	-	.	ID=GCA000153685_02997_gene;locus_tag=GCA000153685_02997
contig_1	Pyrodigal	CDS	3166225	3166953	.	-	0	ID=GCA000153685_02997;Name=Amidotransferase;locus_tag=GCA000153685_02997;product=Amidotransferase;Parent=GCA000153685_02997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07010,RefSeq:WP_003912023.1,SO:0001217,UniParc:UPI00005EE767,UniRef:UniRef100_A0A0H3LD24,UniRef:UniRef50_A0A0F0LWK3,UniRef:UniRef90_A0A0H3LD24
contig_1	Pyrodigal	gene	3167132	3168505	.	-	.	ID=GCA000153685_02998_gene;locus_tag=GCA000153685_02998
contig_1	Pyrodigal	CDS	3167132	3168505	.	-	0	ID=GCA000153685_02998;Name=Glutamine synthetase;locus_tag=GCA000153685_02998;product=Glutamine synthetase;Parent=GCA000153685_02998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01915,RefSeq:WP_003414579.1,SO:0001217,UniParc:UPI00000D5F1A,UniRef:UniRef100_A5U6L4,UniRef:UniRef50_O88070,UniRef:UniRef90_A0A0U0SVS8;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	3168665	3169522	.	-	.	ID=GCA000153685_02999_gene;locus_tag=GCA000153685_02999;gene=map
contig_1	Pyrodigal	CDS	3168665	3169522	.	-	0	ID=GCA000153685_02999;Name=type I methionyl aminopeptidase;locus_tag=GCA000153685_02999;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0005506,GO:0005829,GO:0006508,GO:0016485,GO:0050897,GO:0070006;gene=map;Parent=GCA000153685_02999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,KEGG:K01265,RefSeq:WP_003899513.1,SO:0001217,UniParc:UPI0000125A06,UniRef:UniRef100_P9WK19,UniRef:UniRef50_P9WK19,UniRef:UniRef90_P9WK19;ec_number=3.4.11.18
contig_1	Pyrodigal	gene	3169564	3170148	.	-	.	ID=GCA000153685_03000_gene;locus_tag=GCA000153685_03000
contig_1	Pyrodigal	CDS	3169564	3170148	.	-	0	ID=GCA000153685_03000;Name=DUF1707 domain-containing protein;locus_tag=GCA000153685_03000;product=DUF1707 domain-containing protein;Parent=GCA000153685_03000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899514.1,SO:0001217,UniParc:UPI00000D1002,UniRef:UniRef100_I6Y1W7,UniRef:UniRef50_K0UNI2,UniRef:UniRef90_I6Y1W7
contig_1	Pyrodigal	gene	3170497	3170877	.	+	.	ID=GCA000153685_03001_gene;locus_tag=GCA000153685_03001;gene=vapC23
contig_1	Pyrodigal	CDS	3170497	3170877	.	+	0	ID=GCA000153685_03001;Name=Ribonuclease VapC23;locus_tag=GCA000153685_03001;product=Ribonuclease VapC23;Dbxref=GO:0000287,GO:0004540;gene=vapC23;Parent=GCA000153685_03001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414592.1,SO:0001217,UniParc:UPI00000D1029,UniRef:UniRef100_P9WF89,UniRef:UniRef50_P9WF89,UniRef:UniRef90_P9WF89;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3170959	3172770	.	-	.	ID=GCA000153685_03002_gene;locus_tag=GCA000153685_03002
contig_1	Pyrodigal	CDS	3170959	3172770	.	-	0	ID=GCA000153685_03002;Name=putative penicillin-binding lipoprotein;locus_tag=GCA000153685_03002;product=putative penicillin-binding lipoprotein;Parent=GCA000153685_03002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414596.1,SO:0001217,UniParc:UPI000016531D,UniRef:UniRef100_O33346,UniRef:UniRef50_A0A4R8SQ57,UniRef:UniRef90_O33346
contig_1	Pyrodigal	gene	3173042	3173323	.	+	.	ID=GCA000153685_03003_gene;locus_tag=GCA000153685_03003;gene=relF
contig_1	Pyrodigal	CDS	3173042	3173323	.	+	0	ID=GCA000153685_03003;Name=type II toxin-antitoxin system antitoxin RelF;locus_tag=GCA000153685_03003;product=type II toxin-antitoxin system antitoxin RelF;Dbxref=GO:0003677,GO:0006355,GO:0045927,GO:0097351;gene=relF;Parent=GCA000153685_03003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414599,RefSeq:WP_003414599.1,SO:0001217,UniParc:UPI00000C1525,UniRef:UniRef100_O33347,UniRef:UniRef50_O33347,UniRef:UniRef90_O33347
contig_1	Pyrodigal	gene	3173339	3173590	.	+	.	ID=GCA000153685_03004_gene;locus_tag=GCA000153685_03004;gene=relG
contig_1	Pyrodigal	CDS	3173339	3173590	.	+	0	ID=GCA000153685_03004;Name=Toxin RelG;locus_tag=GCA000153685_03004;product=Toxin RelG;Dbxref=GO:0003677,GO:0004519,GO:0006401,GO:0045892,GO:0045926;gene=relG;Parent=GCA000153685_03004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D3B1,UniRef:UniRef100_A0A0H3LE68,UniRef:UniRef50_O33348,UniRef:UniRef90_O33348;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3173963	3174817	.	-	.	ID=GCA000153685_03005_gene;locus_tag=GCA000153685_03005
contig_1	Pyrodigal	CDS	3173963	3174817	.	-	0	ID=GCA000153685_03005;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000153685_03005;product=N-acetyltransferase domain-containing protein;Parent=GCA000153685_03005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899516.1,SO:0001217,UniParc:UPI00000D5F96,UniRef:UniRef100_I6XFI7,UniRef:UniRef50_A0A5S9NL96,UniRef:UniRef90_A0A0H3LJZ2
contig_1	Pyrodigal	gene	3174873	3176036	.	-	.	ID=GCA000153685_03006_gene;locus_tag=GCA000153685_03006;gene=ispG
contig_1	Pyrodigal	CDS	3174873	3176036	.	-	0	ID=GCA000153685_03006;Name=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;locus_tag=GCA000153685_03006;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;Dbxref=GO:0005506,GO:0005886,GO:0008152,GO:0009274,GO:0016114,GO:0019288,GO:0046429,GO:0051539,GO:0141197;gene=ispG;Parent=GCA000153685_03006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03526,RefSeq:WP_003899517.1,SO:0001217,UniParc:UPI000012D993,UniRef:UniRef100_P9WKG3,UniRef:UniRef50_P9WKG3,UniRef:UniRef90_P9WKG3;ec_number=1.17.7.3
contig_1	Pyrodigal	gene	3176053	3177267	.	-	.	ID=GCA000153685_03007_gene;locus_tag=GCA000153685_03007;gene=rip
contig_1	Pyrodigal	CDS	3176053	3177267	.	-	0	ID=GCA000153685_03007;Name=zinc metalloprotease Rip;locus_tag=GCA000153685_03007;product=zinc metalloprotease Rip;Dbxref=GO:0004175,GO:0004222,GO:0005886,GO:0006508,GO:0046872;gene=rip;Parent=GCA000153685_03007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899518,RefSeq:WP_003899518.1,SO:0001217,UniParc:UPI000013C067,UniRef:UniRef100_P9WHS3,UniRef:UniRef50_P9WHS3,UniRef:UniRef90_P9WHS3;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	3177275	3178564	.	-	.	ID=GCA000153685_03008_gene;locus_tag=GCA000153685_03008;gene=dxr
contig_1	Pyrodigal	CDS	3177275	3178564	.	-	0	ID=GCA000153685_03008;Name=1-deoxy-D-xylulose-5-phosphate reductoisomerase;locus_tag=GCA000153685_03008;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;Dbxref=GO:0000287,GO:0005737,GO:0008299,GO:0019288,GO:0030145,GO:0030604,GO:0046872,GO:0050897,GO:0051483,GO:0051484,GO:0070402;gene=dxr;Parent=GCA000153685_03008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00099,SO:0001217,UniParc:UPI0001277FFB,UniRef:UniRef100_A0A0H3LD31,UniRef:UniRef50_P9WNS1,UniRef:UniRef90_P9WNS1;ec_number=1.1.1.267
contig_1	Pyrodigal	gene	3178887	3179330	.	+	.	ID=GCA000153685_03009_gene;locus_tag=GCA000153685_03009;gene=vapC43
contig_1	Pyrodigal	CDS	3178887	3179330	.	+	0	ID=GCA000153685_03009;Name=Ribonuclease VapC43;locus_tag=GCA000153685_03009;product=Ribonuclease VapC43;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC43;Parent=GCA000153685_03009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414624.1,SO:0001217,UniParc:UPI000013C069,UniRef:UniRef100_P9WF55,UniRef:UniRef50_P9WF55,UniRef:UniRef90_P9WF55;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3179410	3180072	.	+	.	ID=GCA000153685_03010_gene;locus_tag=GCA000153685_03010;gene=mpt83
contig_1	Pyrodigal	CDS	3179410	3180072	.	+	0	ID=GCA000153685_03010;Name=cell surface glycolipoprotein Mpt83;locus_tag=GCA000153685_03010;product=cell surface glycolipoprotein Mpt83;Dbxref=GO:0005576,GO:0005615,GO:0005886,GO:0007155,GO:0030198,GO:0031012,GO:0050839,GO:0052572;gene=mpt83;Parent=GCA000153685_03010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414630,RefSeq:WP_003414630.1,SO:0001217,UniParc:UPI0000031A66,UniRef:UniRef100_P9WNF3,UniRef:UniRef50_P9WNF3,UniRef:UniRef90_P9WNF3
contig_1	Pyrodigal	gene	3180168	3180359	.	+	.	ID=GCA000153685_03011_gene;locus_tag=GCA000153685_03011
contig_1	Pyrodigal	CDS	3180168	3180359	.	+	0	ID=GCA000153685_03011;Name=hypothetical protein;locus_tag=GCA000153685_03011;product=hypothetical protein;Parent=GCA000153685_03011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414632.1,SO:0001217,UniParc:UPI00000D2D21,UniRef:UniRef100_A5U6M8,UniRef:UniRef50_A5U6M8,UniRef:UniRef90_A5U6M8
contig_1	Pyrodigal	gene	3180691	3182439	.	+	.	ID=GCA000153685_03012_gene;locus_tag=GCA000153685_03012;gene=dipZ
contig_1	Pyrodigal	CDS	3180691	3182439	.	+	0	ID=GCA000153685_03012;Name=Protein DipZ;locus_tag=GCA000153685_03012;product=Protein DipZ;Dbxref=GO:0005886,GO:0016209,GO:0016491,GO:0017004;gene=dipZ;Parent=GCA000153685_03012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912869.1,SO:0001217,UniParc:UPI00005EE76C,UniRef:UniRef100_A8CVM6,UniRef:UniRef50_P9WG63,UniRef:UniRef90_P9WG63
contig_1	Pyrodigal	gene	3182535	3183116	.	+	.	ID=GCA000153685_03013_gene;locus_tag=GCA000153685_03013;gene=mpt70
contig_1	Pyrodigal	CDS	3182535	3183116	.	+	0	ID=GCA000153685_03013;Name=Immunogenic protein MPT70;locus_tag=GCA000153685_03013;product=Immunogenic protein MPT70;Dbxref=GO:0005615,GO:0007155,GO:0030198,GO:0031012,GO:0050839;gene=mpt70;Parent=GCA000153685_03013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900589.1,SO:0001217,UniParc:UPI0001277FFC,UniRef:UniRef100_A0A0H3LH84,UniRef:UniRef50_P9WNF3,UniRef:UniRef90_P9WNF5
contig_1	Pyrodigal	gene	3183168	3183482	.	+	.	ID=GCA000153685_03014_gene;locus_tag=GCA000153685_03014
contig_1	Pyrodigal	CDS	3183168	3183482	.	+	0	ID=GCA000153685_03014;Name=putative protein Rv2876;locus_tag=GCA000153685_03014;product=putative protein Rv2876;Dbxref=GO:0005886;Parent=GCA000153685_03014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899522.1,SO:0001217,UniParc:UPI000013C06E,UniRef:UniRef100_P9WL39,UniRef:UniRef50_P9WL39,UniRef:UniRef90_P9WL39
contig_1	Pyrodigal	gene	3183513	3184376	.	-	.	ID=GCA000153685_03015_gene;locus_tag=GCA000153685_03015
contig_1	Pyrodigal	CDS	3183513	3184376	.	-	0	ID=GCA000153685_03015;Name=Mercury resistance transport protein;locus_tag=GCA000153685_03015;product=Mercury resistance transport protein;Parent=GCA000153685_03015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899523.1,SO:0001217,UniParc:UPI00000D1238,UniRef:UniRef100_A5U6N2,UniRef:UniRef50_A0A853LKM6,UniRef:UniRef90_A5U6N2
contig_1	Pyrodigal	gene	3184381	3184902	.	-	.	ID=GCA000153685_03016_gene;locus_tag=GCA000153685_03016;gene=mpt53
contig_1	Pyrodigal	CDS	3184381	3184902	.	-	0	ID=GCA000153685_03016;Name=Soluble secreted antigen MPT53;locus_tag=GCA000153685_03016;product=Soluble secreted antigen MPT53;Dbxref=GO:0005576,GO:0016209,GO:0016491,GO:0045454;gene=mpt53;Parent=GCA000153685_03016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414654.1,SO:0001217,UniParc:UPI00000427FE,UniRef:UniRef100_P9WG65,UniRef:UniRef50_P9WG65,UniRef:UniRef90_P9WG65
contig_1	Pyrodigal	gene	3185088	3186182	.	-	.	ID=GCA000153685_03017_gene;locus_tag=GCA000153685_03017;gene=rlmN
contig_1	Pyrodigal	CDS	3185088	3186182	.	-	0	ID=GCA000153685_03017;Name=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;locus_tag=GCA000153685_03017;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0005886,GO:0008757,GO:0009274,GO:0016433,GO:0019843,GO:0030488,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000153685_03017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06941,RefSeq:WP_003414658.1,SO:0001217,UniParc:UPI000013C06F,UniRef:UniRef100_P9WH15,UniRef:UniRef50_P9WH15,UniRef:UniRef90_P9WH15;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	3186205	3187125	.	-	.	ID=GCA000153685_03018_gene;locus_tag=GCA000153685_03018;gene=cdsA
contig_1	Pyrodigal	CDS	3186205	3187125	.	-	0	ID=GCA000153685_03018;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA000153685_03018;product=Phosphatidate cytidylyltransferase;Dbxref=GO:0004605,GO:0005886,GO:0016024;gene=cdsA;Parent=GCA000153685_03018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00981,RefSeq:WP_003414661.1,SO:0001217,UniParc:UPI0000127462,UniRef:UniRef100_P63759,UniRef:UniRef50_P9WPF7,UniRef:UniRef90_P9WPF7;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	3187148	3187705	.	-	.	ID=GCA000153685_03019_gene;locus_tag=GCA000153685_03019;gene=frr
contig_1	Pyrodigal	CDS	3187148	3187705	.	-	0	ID=GCA000153685_03019;Name=ribosome recycling factor;locus_tag=GCA000153685_03019;product=ribosome recycling factor;Dbxref=GO:0005737,GO:0006412,GO:0006415,GO:0008135,GO:0043023;gene=frr;Parent=GCA000153685_03019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_003414663.1,SO:0001217,UniParc:UPI0000033262,UniRef:UniRef100_P9WGY1,UniRef:UniRef50_P9WGY1,UniRef:UniRef90_P9WGY1
contig_1	Pyrodigal	gene	3187698	3187811	.	-	.	ID=GCA000153685_03020_gene;locus_tag=GCA000153685_03020
contig_1	Pyrodigal	CDS	3187698	3187811	.	-	0	ID=GCA000153685_03020;Name=Uridylate kinase;locus_tag=GCA000153685_03020;product=Uridylate kinase;Parent=GCA000153685_03020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009936525.1,SO:0001217,UniParc:UPI00000D2D23,UniRef:UniRef100_A0A0H3LK08,UniRef:UniRef50_X7YI42,UniRef:UniRef90_A0A0H3LK08
contig_1	Pyrodigal	gene	3187877	3188662	.	-	.	ID=GCA000153685_03021_gene;locus_tag=GCA000153685_03021;gene=pyrH
contig_1	Pyrodigal	CDS	3187877	3188662	.	-	0	ID=GCA000153685_03021;Name=UMP kinase;locus_tag=GCA000153685_03021;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000153685_03021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09903,RefSeq:WP_003414665.1,SO:0001217,UniParc:UPI0000132DB3,UniRef:UniRef100_P9WHK5,UniRef:UniRef50_P9WHK5,UniRef:UniRef90_P9WHK5;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	3188954	3189655	.	+	.	ID=GCA000153685_03022_gene;locus_tag=GCA000153685_03022
contig_1	Pyrodigal	CDS	3188954	3189655	.	+	0	ID=GCA000153685_03022;Name=Transcriptional regulatory protein;locus_tag=GCA000153685_03022;product=Transcriptional regulatory protein;Parent=GCA000153685_03022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917701.1,SO:0001217,UniParc:UPI00005EE76E,UniRef:UniRef100_A0A0H3LD44,UniRef:UniRef50_A0A2S8BGP9,UniRef:UniRef90_A5U6N9
contig_1	Pyrodigal	gene	3189670	3190095	.	-	.	ID=GCA000153685_03023_gene;locus_tag=GCA000153685_03023;gene=tnpB
contig_1	Pyrodigal	CDS	3189670	3190095	.	-	0	ID=GCA000153685_03023;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_03023;product=IS607 family element RNA-guided endonuclease TnpB;Dbxref=GO:0003677,GO:0004519,GO:0006310,GO:0032196,GO:0046872;gene=tnpB;Parent=GCA000153685_03023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003AB4A87,UniRef:UniRef100_P9WL37,UniRef:UniRef50_P9WL37,UniRef:UniRef90_P9WL37;ec_number=3.1.21.-
contig_1	Pyrodigal	gene	3190040	3190963	.	-	.	ID=GCA000153685_03024_gene;locus_tag=GCA000153685_03024;gene=tnpB
contig_1	Pyrodigal	CDS	3190040	3190963	.	-	0	ID=GCA000153685_03024;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_03024;product=IS607 family element RNA-guided endonuclease TnpB;gene=tnpB;Parent=GCA000153685_03024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003AB4A83,UniRef:UniRef100_A0A0E9AAL9,UniRef:UniRef50_A0A0H3LE88,UniRef:UniRef90_A0A0H3LE88
contig_1	Pyrodigal	gene	3190963	3191550	.	-	.	ID=GCA000153685_03025_gene;locus_tag=GCA000153685_03025;gene=tnp
contig_1	Pyrodigal	CDS	3190963	3191550	.	-	0	ID=GCA000153685_03025;Name=IS607 family IS1539 transposase;locus_tag=GCA000153685_03025;product=IS607 family IS1539 transposase;Dbxref=GO:0000150,GO:0003677,GO:0004803;gene=tnp;Parent=GCA000153685_03025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1539,RefSeq:WP_003414668.1,SO:0001217,UniParc:UPI00005F6351,UniRef:UniRef100_P9WL35,UniRef:UniRef50_P9WL35,UniRef:UniRef90_P9WL35
contig_1	Pyrodigal	gene	3191849	3192268	.	+	.	ID=GCA000153685_03026_gene;locus_tag=GCA000153685_03026
contig_1	Pyrodigal	CDS	3191849	3192268	.	+	0	ID=GCA000153685_03026;Name=HTH-type transcriptional repressor Rv2887;locus_tag=GCA000153685_03026;product=HTH-type transcriptional repressor Rv2887;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0006950;Parent=GCA000153685_03026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899525.1,SO:0001217,UniParc:UPI000013C07B,UniRef:UniRef100_P9WME9,UniRef:UniRef50_P9WME9,UniRef:UniRef90_P9WME9
contig_1	Pyrodigal	gene	3192282	3193703	.	-	.	ID=GCA000153685_03027_gene;locus_tag=GCA000153685_03027;gene=amiC
contig_1	Pyrodigal	CDS	3192282	3193703	.	-	0	ID=GCA000153685_03027;Name=amidase;locus_tag=GCA000153685_03027;product=amidase;Dbxref=GO:0003824,GO:0004040,GO:0005886,GO:0009274;gene=amiC;Parent=GCA000153685_03027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414672.1,SO:0001217,UniParc:UPI0000125975,UniRef:UniRef100_P9WQ95,UniRef:UniRef50_P9WQ95,UniRef:UniRef90_P9WQ95;ec_number=3.5.1.4
contig_1	Pyrodigal	gene	3193710	3194525	.	-	.	ID=GCA000153685_03028_gene;locus_tag=GCA000153685_03028;gene=tsf
contig_1	Pyrodigal	CDS	3193710	3194525	.	-	0	ID=GCA000153685_03028;Name=translation elongation factor Ts;locus_tag=GCA000153685_03028;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0005737,GO:0006414;gene=tsf;Parent=GCA000153685_03028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899527.1,SO:0001217,UniParc:UPI0000129D57,UniRef:UniRef100_P9WNM1,UniRef:UniRef50_A0QVB9,UniRef:UniRef90_P9WNM1
contig_1	Pyrodigal	gene	3194537	3195400	.	-	.	ID=GCA000153685_03029_gene;locus_tag=GCA000153685_03029;gene=rpsB
contig_1	Pyrodigal	CDS	3194537	3195400	.	-	0	ID=GCA000153685_03029;Name=30S ribosomal protein S2;locus_tag=GCA000153685_03029;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000153685_03029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02967,RefSeq:WP_003899528.1,SO:0001217,UniParc:UPI0000134F10,UniRef:UniRef100_P9WH39,UniRef:UniRef50_P9WH39,UniRef:UniRef90_P9WH39
contig_1	Pyrodigal	gene	3195574	3196194	.	-	.	ID=GCA000153685_03030_gene;locus_tag=GCA000153685_03030
contig_1	Pyrodigal	CDS	3195574	3196194	.	-	0	ID=GCA000153685_03030;Name=hypothetical protein;locus_tag=GCA000153685_03030;product=hypothetical protein;Parent=GCA000153685_03030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D24,UniRef:UniRef100_Q8VJB2,UniRef:UniRef50_Q8VJB2,UniRef:UniRef90_Q8VJB2
contig_1	Pyrodigal	gene	3196212	3197438	.	-	.	ID=GCA000153685_03031_gene;locus_tag=GCA000153685_03031;gene=pPE45
contig_1	Pyrodigal	CDS	3196212	3197438	.	-	0	ID=GCA000153685_03031;Name=putative PPE family protein PPE45;locus_tag=GCA000153685_03031;product=putative PPE family protein PPE45;Dbxref=GO:0005886,GO:0052572;gene=pPE45;Parent=GCA000153685_03031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414680.1,SO:0001217,UniParc:UPI000013C080,UniRef:UniRef100_P9WHZ1,UniRef:UniRef50_P9WI13,UniRef:UniRef90_P9WHZ1
contig_1	Pyrodigal	gene	3197452	3197595	.	-	.	ID=GCA000153685_03032_gene;locus_tag=GCA000153685_03032
contig_1	Pyrodigal	CDS	3197452	3197595	.	-	0	ID=GCA000153685_03032;Name=hypothetical protein;locus_tag=GCA000153685_03032;product=hypothetical protein;Parent=GCA000153685_03032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414682.1,SO:0001217,UniParc:UPI00000D2D25,UniRef:UniRef100_A0A0H3LD54,UniRef:UniRef50_A0A0H3LD54,UniRef:UniRef90_A0A0H3LD54
contig_1	Pyrodigal	gene	3197898	3198815	.	+	.	ID=GCA000153685_03033_gene;locus_tag=GCA000153685_03033
contig_1	Pyrodigal	CDS	3197898	3198815	.	+	0	ID=GCA000153685_03033;Name=F420-dependent glucose-6-phosphate dehydrogenase;locus_tag=GCA000153685_03033;product=F420-dependent glucose-6-phosphate dehydrogenase;Parent=GCA000153685_03033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003AA7885,UniRef:UniRef100_A0A0E7XMJ1,UniRef:UniRef50_A0A0E7XMJ1,UniRef:UniRef90_A0A0E7XMJ1
contig_1	Pyrodigal	gene	3198812	3199759	.	-	.	ID=GCA000153685_03034_gene;locus_tag=GCA000153685_03034;gene=xerC
contig_1	Pyrodigal	CDS	3198812	3199759	.	-	0	ID=GCA000153685_03034;Name=Tyrosine recombinase XerC;locus_tag=GCA000153685_03034;product=Tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006313,GO:0007059,GO:0009037,GO:0051301;gene=xerC;Parent=GCA000153685_03034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165150,UniRef:UniRef100_A0A0E7ST90,UniRef:UniRef50_P9WF35,UniRef:UniRef90_P9WF35
contig_1	Pyrodigal	gene	3199799	3200650	.	-	.	ID=GCA000153685_03035_gene;locus_tag=GCA000153685_03035
contig_1	Pyrodigal	CDS	3199799	3200650	.	-	0	ID=GCA000153685_03035;Name=putative protein Mb2919c;locus_tag=GCA000153685_03035;product=putative protein Mb2919c;Dbxref=GO:0016491;Parent=GCA000153685_03035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900590.1,SO:0001217,UniParc:UPI000013C083,UniRef:UniRef100_P9WL31,UniRef:UniRef50_P9WL31,UniRef:UniRef90_P9WL31
contig_1	Pyrodigal	gene	3200683	3201852	.	-	.	ID=GCA000153685_03036_gene;locus_tag=GCA000153685_03036;gene=dprA
contig_1	Pyrodigal	CDS	3200683	3201852	.	-	0	ID=GCA000153685_03036;Name=DNA-processing protein DprA;locus_tag=GCA000153685_03036;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000153685_03036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414694.1,SO:0001217,UniParc:UPI0000165152,UniRef:UniRef100_P9WL29,UniRef:UniRef50_P9WL29,UniRef:UniRef90_P9WL29
contig_1	Pyrodigal	gene	3201849	3203360	.	-	.	ID=GCA000153685_03037_gene;locus_tag=GCA000153685_03037
contig_1	Pyrodigal	CDS	3201849	3203360	.	-	0	ID=GCA000153685_03037;Name=putative protein Mb2921c;locus_tag=GCA000153685_03037;product=putative protein Mb2921c;Dbxref=GO:0005524,GO:0016887;Parent=GCA000153685_03037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414700.1,SO:0001217,UniParc:UPI000013C087,UniRef:UniRef100_P9WPR1,UniRef:UniRef50_P9WPR1,UniRef:UniRef90_P9WPR1
contig_1	Pyrodigal	gene	3203360	3203746	.	-	.	ID=GCA000153685_03038_gene;locus_tag=GCA000153685_03038;gene=yraN
contig_1	Pyrodigal	CDS	3203360	3203746	.	-	0	ID=GCA000153685_03038;Name=YraN family protein;locus_tag=GCA000153685_03038;product=YraN family protein;Dbxref=GO:0003676;gene=yraN;Parent=GCA000153685_03038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07460,RefSeq:WP_003414702.1,SO:0001217,UniParc:UPI000013C089,UniRef:UniRef100_P9WFM9,UniRef:UniRef50_P9WFM9,UniRef:UniRef90_P9WFM9
contig_1	Pyrodigal	gene	3203994	3204824	.	-	.	ID=GCA000153685_03039_gene;locus_tag=GCA000153685_03039;gene=fdhD
contig_1	Pyrodigal	CDS	3203994	3204824	.	-	0	ID=GCA000153685_03039;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000153685_03039;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000153685_03039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02379,RefSeq:WP_003414705.1,SO:0001217,UniParc:UPI000012A5E8,UniRef:UniRef100_P9WNF1,UniRef:UniRef50_P9WNF1,UniRef:UniRef90_P9WNF1
contig_1	Pyrodigal	gene	3204824	3207163	.	-	.	ID=GCA000153685_03040_gene;locus_tag=GCA000153685_03040
contig_1	Pyrodigal	CDS	3204824	3207163	.	-	0	ID=GCA000153685_03040;Name=putative oxidoreductase Mb2924c;locus_tag=GCA000153685_03040;product=putative oxidoreductase Mb2924c;Dbxref=GO:0008863,GO:0016020,GO:0030151,GO:0043546,GO:0051539;Parent=GCA000153685_03040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899532.1,SO:0001217,UniParc:UPI000013C0ED,UniRef:UniRef100_P9WJP9,UniRef:UniRef50_P9WJP9,UniRef:UniRef90_P9WJP9;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3207221	3207526	.	-	.	ID=GCA000153685_03041_gene;locus_tag=GCA000153685_03041
contig_1	Pyrodigal	CDS	3207221	3207526	.	-	0	ID=GCA000153685_03041;Name=putative protein Mb2925c;locus_tag=GCA000153685_03041;product=putative protein Mb2925c;Dbxref=GO:0005886;Parent=GCA000153685_03041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414710.1,SO:0001217,UniParc:UPI000013C0EE,UniRef:UniRef100_P9WL27,UniRef:UniRef50_P9WL27,UniRef:UniRef90_P9WL27
contig_1	Pyrodigal	gene	3207580	3208317	.	-	.	ID=GCA000153685_03042_gene;locus_tag=GCA000153685_03042;gene=rnhB
contig_1	Pyrodigal	CDS	3207580	3208317	.	-	0	ID=GCA000153685_03042;Name=ribonuclease HII;locus_tag=GCA000153685_03042;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000153685_03042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03470,SO:0001217,UniParc:UPI00005EE775,UniRef:UniRef100_P9WH01,UniRef:UniRef50_B2HJL9,UniRef:UniRef90_P9WH01;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	3208388	3209272	.	-	.	ID=GCA000153685_03043_gene;locus_tag=GCA000153685_03043;gene=lepB
contig_1	Pyrodigal	CDS	3208388	3209272	.	-	0	ID=GCA000153685_03043;Name=signal peptidase I;locus_tag=GCA000153685_03043;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000153685_03043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03100,RefSeq:WP_003414715.1,SO:0001217,UniParc:UPI000011DC7F,UniRef:UniRef100_P9WKA1,UniRef:UniRef50_P9WKA1,UniRef:UniRef90_P9WKA1;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	3209330	3209671	.	-	.	ID=GCA000153685_03044_gene;locus_tag=GCA000153685_03044;gene=rplS
contig_1	Pyrodigal	CDS	3209330	3209671	.	-	0	ID=GCA000153685_03044;Name=50S ribosomal protein L19;locus_tag=GCA000153685_03044;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000153685_03044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_003414717.1,SO:0001217,UniParc:UPI0000133CB6,UniRef:UniRef100_P9WHC9,UniRef:UniRef50_B4RCC6,UniRef:UniRef90_P9WHC9
contig_1	Pyrodigal	gene	3210046	3210990	.	+	.	ID=GCA000153685_03045_gene;locus_tag=GCA000153685_03045;gene=lppW
contig_1	Pyrodigal	CDS	3210046	3210990	.	+	0	ID=GCA000153685_03045;Name=Putative lipoprotein LppW;locus_tag=GCA000153685_03045;product=Putative lipoprotein LppW;Dbxref=GO:0005576,GO:0005886,GO:0008800,GO:0030655,GO:0046677;gene=lppW;Parent=GCA000153685_03045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414720.1,SO:0001217,UniParc:UPI000012E874,UniRef:UniRef100_P9WK67,UniRef:UniRef50_P9WK67,UniRef:UniRef90_P9WK67
contig_1	Pyrodigal	gene	3211083	3211775	.	-	.	ID=GCA000153685_03046_gene;locus_tag=GCA000153685_03046;gene=trmD
contig_1	Pyrodigal	CDS	3211083	3211775	.	-	0	ID=GCA000153685_03046;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000153685_03046;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0008033,GO:0052906;gene=trmD;Parent=GCA000153685_03046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00554,RefSeq:WP_003414722.1,SO:0001217,UniParc:UPI000013741E,UniRef:UniRef100_P9WFY7,UniRef:UniRef50_Q73VN9,UniRef:UniRef90_P9WFY7;ec_number=2.1.1.228
contig_1	Pyrodigal	gene	3211779	3212309	.	-	.	ID=GCA000153685_03047_gene;locus_tag=GCA000153685_03047;gene=rimM
contig_1	Pyrodigal	CDS	3211779	3212309	.	-	0	ID=GCA000153685_03047;Name=ribosome maturation factor RimM;locus_tag=GCA000153685_03047;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000153685_03047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414726.1,SO:0001217,UniParc:UPI0000133910,UniRef:UniRef100_P9WH19,UniRef:UniRef50_P9WH19,UniRef:UniRef90_P9WH19
contig_1	Pyrodigal	gene	3212323	3212565	.	-	.	ID=GCA000153685_03048_gene;locus_tag=GCA000153685_03048;gene=malE
contig_1	Pyrodigal	CDS	3212323	3212565	.	-	0	ID=GCA000153685_03048;Name=maltose/maltodextrin ABC transporter substrate-binding protein MalE;locus_tag=GCA000153685_03048;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;Dbxref=GO:0003723,GO:0005737,GO:0008643,GO:0015144,GO:0055085;gene=malE;Parent=GCA000153685_03048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10108,RefSeq:WP_003414728.1,SO:0001217,UniParc:UPI000013C0F1,UniRef:UniRef100_P9WFM7,UniRef:UniRef50_P9WFM7,UniRef:UniRef90_P9WFM7;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	3212573	3213061	.	-	.	ID=GCA000153685_03049_gene;locus_tag=GCA000153685_03049;gene=rpsP
contig_1	Pyrodigal	CDS	3212573	3213061	.	-	0	ID=GCA000153685_03049;Name=30S ribosomal protein S16;locus_tag=GCA000153685_03049;product=30S ribosomal protein S16;Dbxref=GO:0003735,GO:0005737,GO:0005886,GO:0006412,GO:0015935;gene=rpsP;Parent=GCA000153685_03049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414731.1,SO:0001217,UniParc:UPI0000134D47,UniRef:UniRef100_P9WH53,UniRef:UniRef50_P9WH53,UniRef:UniRef90_P9WH53
contig_1	Pyrodigal	gene	3213245	3213664	.	-	.	ID=GCA000153685_03050_gene;locus_tag=GCA000153685_03050
contig_1	Pyrodigal	CDS	3213245	3213664	.	-	0	ID=GCA000153685_03050;Name=putative protein Rv2910c;locus_tag=GCA000153685_03050;product=putative protein Rv2910c;Parent=GCA000153685_03050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912031.1,SO:0001217,UniParc:UPI00005EE777,UniRef:UniRef100_P9WL25,UniRef:UniRef50_P9WL25,UniRef:UniRef90_P9WL25
contig_1	Pyrodigal	gene	3213757	3214632	.	+	.	ID=GCA000153685_03051_gene;locus_tag=GCA000153685_03051;gene=dacB2
contig_1	Pyrodigal	CDS	3213757	3214632	.	+	0	ID=GCA000153685_03051;Name=D-alanyl-D-alanine carboxypeptidase DacB2;locus_tag=GCA000153685_03051;product=D-alanyl-D-alanine carboxypeptidase DacB2;Dbxref=GO:0006508,GO:0008360,GO:0009002,GO:0009252,GO:0042597,GO:0071555;gene=dacB2;Parent=GCA000153685_03051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414736,KEGG:K07258,RefSeq:WP_003414736.1,SO:0001217,UniParc:UPI00000D1233,UniRef:UniRef100_I6Y204,UniRef:UniRef50_I6Y204,UniRef:UniRef90_I6Y204;ec_number=3.4.16.-
contig_1	Pyrodigal	gene	3214692	3215279	.	-	.	ID=GCA000153685_03052_gene;locus_tag=GCA000153685_03052
contig_1	Pyrodigal	CDS	3214692	3215279	.	-	0	ID=GCA000153685_03052;Name=putative HTH-type transcriptional regulator Rv2912c;locus_tag=GCA000153685_03052;product=putative HTH-type transcriptional regulator Rv2912c;Dbxref=GO:0000976,GO:0003700,GO:0005829,GO:0006355;Parent=GCA000153685_03052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414739.1,SO:0001217,UniParc:UPI000013C0F3,UniRef:UniRef100_P9WMC7,UniRef:UniRef50_P9WMC7,UniRef:UniRef90_P9WMC7
contig_1	Pyrodigal	gene	3215281	3217077	.	-	.	ID=GCA000153685_03053_gene;locus_tag=GCA000153685_03053
contig_1	Pyrodigal	CDS	3215281	3217077	.	-	0	ID=GCA000153685_03053;Name=putative protein Rv2913c;locus_tag=GCA000153685_03053;product=putative protein Rv2913c;Dbxref=GO:0005829,GO:0016812;Parent=GCA000153685_03053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00039B9F8A,UniRef:UniRef100_A0A0E8NTT0,UniRef:UniRef50_P9WJH9,UniRef:UniRef90_P9WJH9
contig_1	Pyrodigal	gene	3217185	3218942	.	-	.	ID=GCA000153685_03054_gene;locus_tag=GCA000153685_03054;gene=pknI
contig_1	Pyrodigal	CDS	3217185	3218942	.	-	0	ID=GCA000153685_03054;Name=serine/threonine protein kinase PknI;locus_tag=GCA000153685_03054;product=serine/threonine protein kinase PknI;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005829,GO:0005886,GO:0030145,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0040009,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknI;Parent=GCA000153685_03054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900593,RefSeq:WP_003900593.1,SO:0001217,UniParc:UPI0000131B7F,UniRef:UniRef100_P9WI69,UniRef:UniRef50_P9WI69,UniRef:UniRef90_P9WI69;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	3218986	3220098	.	-	.	ID=GCA000153685_03055_gene;locus_tag=GCA000153685_03055
contig_1	Pyrodigal	CDS	3218986	3220098	.	-	0	ID=GCA000153685_03055;Name=putative protein Rv2915c;locus_tag=GCA000153685_03055;product=putative protein Rv2915c;Dbxref=GO:0016810;Parent=GCA000153685_03055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899537.1,SO:0001217,UniParc:UPI000013C0F8,UniRef:UniRef100_P9WL23,UniRef:UniRef50_P9WL23,UniRef:UniRef90_P9WL23
contig_1	Pyrodigal	gene	3220126	3221703	.	-	.	ID=GCA000153685_03056_gene;locus_tag=GCA000153685_03056;gene=ffh
contig_1	Pyrodigal	CDS	3220126	3221703	.	-	0	ID=GCA000153685_03056;Name=signal recognition particle protein;locus_tag=GCA000153685_03056;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0006614,GO:0008312,GO:0009306,GO:0016887,GO:0048500,GO:0048501;gene=ffh;Parent=GCA000153685_03056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0541,COG:U,KEGG:K03106,RefSeq:WP_003414748.1,SO:0001217,UniParc:UPI0000135EEA,UniRef:UniRef100_P9WGD7,UniRef:UniRef50_P9WGD7,UniRef:UniRef90_P9WGD7;ec_number=3.6.5.4
contig_1	Pyrodigal	gene	3221853	3223661	.	+	.	ID=GCA000153685_03057_gene;locus_tag=GCA000153685_03057
contig_1	Pyrodigal	CDS	3221853	3223661	.	+	0	ID=GCA000153685_03057;Name=putative protein Rv2917;locus_tag=GCA000153685_03057;product=putative protein Rv2917;Dbxref=GO:0003677,GO:0005524,GO:0005829,GO:0005886,GO:0009307,GO:0016787;Parent=GCA000153685_03057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912033.1,SO:0001217,UniParc:UPI00005EE778,UniRef:UniRef100_A0A1R3Y2J6,UniRef:UniRef50_P9WL21,UniRef:UniRef90_P9WL21
contig_1	Pyrodigal	gene	3223672	3226098	.	-	.	ID=GCA000153685_03058_gene;locus_tag=GCA000153685_03058;gene=glnD
contig_1	Pyrodigal	CDS	3223672	3226098	.	-	0	ID=GCA000153685_03058;Name=[protein-PII] uridylyltransferase;locus_tag=GCA000153685_03058;product=[protein-PII] uridylyltransferase;Dbxref=GO:0005886,GO:0006808,GO:0008081,GO:0008152,GO:0008773,GO:0009274,GO:0070566;gene=glnD;Parent=GCA000153685_03058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899539.1,SO:0001217,UniParc:UPI000012B72A,UniRef:UniRef100_P9WN29,UniRef:UniRef50_P9WN29,UniRef:UniRef90_P9WN29;ec_number=2.7.7.59
contig_1	Pyrodigal	gene	3226156	3226494	.	-	.	ID=GCA000153685_03059_gene;locus_tag=GCA000153685_03059;gene=glnB
contig_1	Pyrodigal	CDS	3226156	3226494	.	-	0	ID=GCA000153685_03059;Name=nitrogen regulatory protein P-II;locus_tag=GCA000153685_03059;product=nitrogen regulatory protein P-II;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006808,GO:0030234,GO:0043531,GO:0051701;gene=glnB;Parent=GCA000153685_03059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414756,COG:COG0347,COG:TE,RefSeq:WP_003414756.1,SO:0001217,UniParc:UPI000012B714,UniRef:UniRef100_P9WN31,UniRef:UniRef50_P9WN31,UniRef:UniRef90_P9WN31
contig_1	Pyrodigal	gene	3226491	3227924	.	-	.	ID=GCA000153685_03060_gene;locus_tag=GCA000153685_03060;gene=amt
contig_1	Pyrodigal	CDS	3226491	3227924	.	-	0	ID=GCA000153685_03060;Name=Ammonium transporter;locus_tag=GCA000153685_03060;product=Ammonium transporter;Dbxref=GO:0005886,GO:0008519,GO:0072488;gene=amt;Parent=GCA000153685_03060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03320,RefSeq:WP_003899540.1,SO:0001217,UniParc:UPI0000125A45,UniRef:UniRef100_P9WQ65,UniRef:UniRef50_P9WQ65,UniRef:UniRef90_P9WQ65
contig_1	Pyrodigal	gene	3228014	3228796	.	+	.	ID=GCA000153685_03061_gene;locus_tag=GCA000153685_03061
contig_1	Pyrodigal	CDS	3228014	3228796	.	+	0	ID=GCA000153685_03061;Name=hypothetical protein;locus_tag=GCA000153685_03061;product=hypothetical protein;Parent=GCA000153685_03061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00256EFC61
contig_1	Pyrodigal	gene	3228793	3230061	.	-	.	ID=GCA000153685_03062_gene;locus_tag=GCA000153685_03062;gene=ftsY
contig_1	Pyrodigal	CDS	3228793	3230061	.	-	0	ID=GCA000153685_03062;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000153685_03062;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0005525,GO:0005737,GO:0005886,GO:0006605,GO:0006614,GO:0009274,GO:0009306,GO:0016887;gene=ftsY;Parent=GCA000153685_03062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03110,RefSeq:WP_003899541.1,SO:0001217,UniParc:UPI000012AD0D,UniRef:UniRef100_P9WGD9,UniRef:UniRef50_P9WGD9,UniRef:UniRef90_P9WGD9;ec_number=3.6.5.4
contig_1	Pyrodigal	gene	3230111	3233728	.	-	.	ID=GCA000153685_03063_gene;locus_tag=GCA000153685_03063;gene=smc
contig_1	Pyrodigal	CDS	3230111	3233728	.	-	0	ID=GCA000153685_03063;Name=chromosome segregation protein SMC;locus_tag=GCA000153685_03063;product=chromosome segregation protein SMC;Dbxref=GO:0003677,GO:0005524,GO:0005694,GO:0005829,GO:0005886,GO:0006260,GO:0007059,GO:0007062,GO:0009274,GO:0016887,GO:0030261;gene=smc;Parent=GCA000153685_03063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03529,RefSeq:WP_003899542.1,SO:0001217,UniParc:UPI0000135A96,UniRef:UniRef100_P9WGF3,UniRef:UniRef50_P9WGF3,UniRef:UniRef90_P9WGF3
contig_1	Pyrodigal	gene	3233740	3234021	.	-	.	ID=GCA000153685_03064_gene;locus_tag=GCA000153685_03064;gene=acyP
contig_1	Pyrodigal	CDS	3233740	3234021	.	-	0	ID=GCA000153685_03064;Name=acylphosphatase;locus_tag=GCA000153685_03064;product=acylphosphatase;Dbxref=GO:0003998;gene=acyP;Parent=GCA000153685_03064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900594.1,SO:0001217,UniParc:UPI0001278074,UniRef:UniRef100_A0A0H3LEB7,UniRef:UniRef50_P9WQC9,UniRef:UniRef90_P9WQC9;ec_number=3.6.1.7
contig_1	Pyrodigal	gene	3234008	3234421	.	-	.	ID=GCA000153685_03065_gene;locus_tag=GCA000153685_03065
contig_1	Pyrodigal	CDS	3234008	3234421	.	-	0	ID=GCA000153685_03065;Name=putative protein Rv2923c;locus_tag=GCA000153685_03065;product=putative protein Rv2923c;Dbxref=GO:0005886;Parent=GCA000153685_03065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900595.1,SO:0001217,UniParc:UPI0001278075,UniRef:UniRef100_A0A0H3LK58,UniRef:UniRef50_P9WL19,UniRef:UniRef90_P9WL19
contig_1	Pyrodigal	gene	3234523	3235392	.	-	.	ID=GCA000153685_03066_gene;locus_tag=GCA000153685_03066;gene=mutM
contig_1	Pyrodigal	CDS	3234523	3235392	.	-	0	ID=GCA000153685_03066;Name=DNA-formamidopyrimidine glycosylase;locus_tag=GCA000153685_03066;product=DNA-formamidopyrimidine glycosylase;Dbxref=GO:0003684,GO:0003690,GO:0003906,GO:0005737,GO:0005886,GO:0006281,GO:0006284,GO:0006979,GO:0008270,GO:0008534,GO:0034039,GO:0046872,GO:0140078;gene=mutM;Parent=GCA000153685_03066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10563,RefSeq:WP_003414814.1,SO:0001217,UniParc:UPI000012AB8F,UniRef:UniRef100_P9WNC3,UniRef:UniRef50_P9WNC3,UniRef:UniRef90_P9WNC3;ec_number=3.2.2.23
contig_1	Pyrodigal	gene	3235751	3236473	.	-	.	ID=GCA000153685_03067_gene;locus_tag=GCA000153685_03067;gene=rnc
contig_1	Pyrodigal	CDS	3235751	3236473	.	-	0	ID=GCA000153685_03067;Name=ribonuclease III;locus_tag=GCA000153685_03067;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005829,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0046872;gene=rnc;Parent=GCA000153685_03067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414820.1,SO:0001217,UniParc:UPI0000134357,UniRef:UniRef100_P9WH03,UniRef:UniRef50_P9WH03,UniRef:UniRef90_P9WH03;ec_number=3.1.26.3
contig_1	Pyrodigal	gene	3236470	3237057	.	-	.	ID=GCA000153685_03068_gene;locus_tag=GCA000153685_03068
contig_1	Pyrodigal	CDS	3236470	3237057	.	-	0	ID=GCA000153685_03068;Name=putative protein Rv2926c;locus_tag=GCA000153685_03068;product=putative protein Rv2926c;Parent=GCA000153685_03068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912009.1,SO:0001217,UniParc:UPI0000165157,UniRef:UniRef100_P9WL17,UniRef:UniRef50_P9WL17,UniRef:UniRef90_P9WL17
contig_1	Pyrodigal	gene	3237144	3237881	.	-	.	ID=GCA000153685_03069_gene;locus_tag=GCA000153685_03069;gene=divIVA
contig_1	Pyrodigal	CDS	3237144	3237881	.	-	0	ID=GCA000153685_03069;Name=putative protein MT2997;locus_tag=GCA000153685_03069;product=putative protein MT2997;gene=divIVA;Parent=GCA000153685_03069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_003414826.1,SO:0001217,UniParc:UPI000013C108,UniRef:UniRef100_P9WL15,UniRef:UniRef50_Q9CBS6,UniRef:UniRef90_P9WL15
contig_1	Pyrodigal	gene	3238120	3238905	.	+	.	ID=GCA000153685_03070_gene;locus_tag=GCA000153685_03070;gene=tesA
contig_1	Pyrodigal	CDS	3238120	3238905	.	+	0	ID=GCA000153685_03070;Name=thioesterase TesA;locus_tag=GCA000153685_03070;product=thioesterase TesA;Dbxref=GO:0005886,GO:0008126,GO:0008610,GO:0047617,GO:0052167,GO:0071770;gene=tesA;Parent=GCA000153685_03070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414828,RefSeq:WP_003414828.1,SO:0001217,UniParc:UPI000013C109,UniRef:UniRef100_P9WQD5,UniRef:UniRef50_P9WQD5,UniRef:UniRef90_P9WQD5;ec_number=3.1.2.-
contig_1	Pyrodigal	gene	3239619	3241370	.	+	.	ID=GCA000153685_03071_gene;locus_tag=GCA000153685_03071;gene=fadD26
contig_1	Pyrodigal	CDS	3239619	3241370	.	+	0	ID=GCA000153685_03071;Name=long-chain-fatty-acid--AMP ligase FadD26;locus_tag=GCA000153685_03071;product=long-chain-fatty-acid--AMP ligase FadD26;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006633,GO:0008610,GO:0016874,GO:0016878,GO:0051701,GO:0052572,GO:0070566,GO:0071766,GO:0071770,GO:0097040;gene=fadD26;Parent=GCA000153685_03071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900597,RefSeq:WP_003900597.1,SO:0001217,UniParc:UPI000012A5C4,UniRef:UniRef100_P9WQ43,UniRef:UniRef50_P9WQ59,UniRef:UniRef90_P9WQ43;ec_number=6.2.1.59
contig_1	Pyrodigal	gene	3241367	3246997	.	+	.	ID=GCA000153685_03072_gene;locus_tag=GCA000153685_03072;gene=ppsA
contig_1	Pyrodigal	CDS	3241367	3246997	.	+	0	ID=GCA000153685_03072;Name=phthiocerol type I polyketide synthase PpsA;locus_tag=GCA000153685_03072;product=phthiocerol type I polyketide synthase PpsA;Dbxref=GO:0000036,GO:0004312,GO:0004315,GO:0004316,GO:0005737,GO:0006633,GO:0009274,GO:0031177,GO:0034081,GO:0071770,GO:0097040,GO:0097041;gene=ppsA;Parent=GCA000153685_03072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886158,RefSeq:WP_003900598.1,SO:0001217,UniParc:UPI00005EE77B,UniRef:UniRef100_A0A9P1PFY9,UniRef:UniRef50_P9WQE7,UniRef:UniRef90_P9WQE7;ec_number=2.3.1.292
contig_1	Pyrodigal	gene	3246997	3251610	.	+	.	ID=GCA000153685_03073_gene;locus_tag=GCA000153685_03073;gene=ppsB
contig_1	Pyrodigal	CDS	3246997	3251610	.	+	0	ID=GCA000153685_03073;Name=phthiocerol type I polyketide synthase PpsB;locus_tag=GCA000153685_03073;product=phthiocerol type I polyketide synthase PpsB;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0006633,GO:0016491,GO:0031177,GO:0034081,GO:0071770,GO:0097040,GO:0097041;gene=ppsB;Parent=GCA000153685_03073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899547,SO:0001217,UniParc:UPI00012780A9,UniRef:UniRef100_P9WQE5,UniRef:UniRef50_Q7TXL9,UniRef:UniRef90_P9WQE5;ec_number=2.3.1.292
contig_1	Pyrodigal	gene	3251607	3258173	.	+	.	ID=GCA000153685_03074_gene;locus_tag=GCA000153685_03074;gene=ppsC
contig_1	Pyrodigal	CDS	3251607	3258173	.	+	0	ID=GCA000153685_03074;Name=phthiocerol type I polyketide synthase PpsC;locus_tag=GCA000153685_03074;product=phthiocerol type I polyketide synthase PpsC;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005829,GO:0005886,GO:0006633,GO:0016491,GO:0031177,GO:0034081,GO:0071766,GO:0071770,GO:0097040,GO:0097041;gene=ppsC;Parent=GCA000153685_03074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414837,RefSeq:WP_003899548.1,SO:0001217,UniParc:UPI000016515B,UniRef:UniRef100_A0A0H3LK68,UniRef:UniRef50_P96202,UniRef:UniRef90_P96202;ec_number=2.3.1.292
contig_1	Pyrodigal	gene	3258170	3263653	.	+	.	ID=GCA000153685_03075_gene;locus_tag=GCA000153685_03075;gene=ppsD
contig_1	Pyrodigal	CDS	3258170	3263653	.	+	0	ID=GCA000153685_03075;Name=phthiocerol type I polyketide synthase PpsD;locus_tag=GCA000153685_03075;product=phthiocerol type I polyketide synthase PpsD;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005886,GO:0006633,GO:0016491,GO:0031177,GO:0034081,GO:0071770,GO:0097040,GO:0097041;gene=ppsD;Parent=GCA000153685_03075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899549,RefSeq:WP_003899549.1,SO:0001217,UniParc:UPI0000036B9D,UniRef:UniRef100_P9WQE3,UniRef:UniRef50_Q7TXL9,UniRef:UniRef90_P9WQE3;ec_number=2.3.1.292
contig_1	Pyrodigal	gene	3263659	3268125	.	+	.	ID=GCA000153685_03076_gene;locus_tag=GCA000153685_03076;gene=ppsE
contig_1	Pyrodigal	CDS	3263659	3268125	.	+	0	ID=GCA000153685_03076;Name=phthiocerol type I polyketide synthase PpsE;locus_tag=GCA000153685_03076;product=phthiocerol type I polyketide synthase PpsE;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005886,GO:0006633,GO:0008610,GO:0009274,GO:0016491,GO:0031177,GO:0034081,GO:0071766,GO:0071770;gene=ppsE;Parent=GCA000153685_03076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900602,RefSeq:WP_003900602.1,SO:0001217,UniParc:UPI00000D1146,UniRef:UniRef100_P9WQE1,UniRef:UniRef50_P9WQE1,UniRef:UniRef90_P9WQE1;ec_number=2.3.1.292
contig_1	Pyrodigal	gene	3268136	3269131	.	+	.	ID=GCA000153685_03077_gene;locus_tag=GCA000153685_03077;gene=drrB
contig_1	Pyrodigal	CDS	3268136	3269131	.	+	0	ID=GCA000153685_03077;Name=daunorubicin ABC transporter permease DrrB;locus_tag=GCA000153685_03077;product=daunorubicin ABC transporter permease DrrB;Dbxref=GO:0005524,GO:0005886,GO:0006869,GO:0009274,GO:0016887,GO:0043215,GO:0046677,GO:0051701,GO:0055085,GO:1900753;gene=drrB;Parent=GCA000153685_03077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901496,RefSeq:WP_003901496.1,SO:0001217,UniParc:UPI0000036B97,UniRef:UniRef100_P9WQL9,UniRef:UniRef50_P9WQL9,UniRef:UniRef90_P9WQL9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	3269128	3269997	.	+	.	ID=GCA000153685_03078_gene;locus_tag=GCA000153685_03078;gene=drrA
contig_1	Pyrodigal	CDS	3269128	3269997	.	+	0	ID=GCA000153685_03078;Name=daunorubicin ABC transporter ATP-binding protein DrrA;locus_tag=GCA000153685_03078;product=daunorubicin ABC transporter ATP-binding protein DrrA;Dbxref=GO:0005886,GO:0008610,GO:0043190,GO:0043215,GO:0046677,GO:0055085,GO:0071770,GO:0140359,GO:1900753;gene=drrA;Parent=GCA000153685_03078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414848,RefSeq:WP_003414848.1,SO:0001217,UniParc:UPI0000036B98,UniRef:UniRef100_P9WG23,UniRef:UniRef50_P9WG23,UniRef:UniRef90_P9WG23
contig_1	Pyrodigal	gene	3269994	3270824	.	+	.	ID=GCA000153685_03079_gene;locus_tag=GCA000153685_03079;gene=drrC
contig_1	Pyrodigal	CDS	3269994	3270824	.	+	0	ID=GCA000153685_03079;Name=daunorubicin ABC transporter permease DrrC;locus_tag=GCA000153685_03079;product=daunorubicin ABC transporter permease DrrC;Dbxref=GO:0005576,GO:0009274,GO:0043190,GO:0043215,GO:0046677,GO:0051701,GO:0052572,GO:0140359,GO:1900753;gene=drrC;Parent=GCA000153685_03079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414851.1,SO:0001217,UniParc:UPI0000036B90,UniRef:UniRef100_P9WG21,UniRef:UniRef50_P9WG21,UniRef:UniRef90_P9WG21,VFDB:VFC0258,VFDB:VFG001813
contig_1	Pyrodigal	gene	3270871	3272139	.	+	.	ID=GCA000153685_03080_gene;locus_tag=GCA000153685_03080;gene=papA5
contig_1	Pyrodigal	CDS	3270871	3272139	.	+	0	ID=GCA000153685_03080;Name=phthiocerol/phthiodiolone dimycocerosyl transferase;locus_tag=GCA000153685_03080;product=phthiocerol/phthiodiolone dimycocerosyl transferase;Dbxref=GO:0006629,GO:0016746;gene=papA5;Parent=GCA000153685_03080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414853.1,SO:0001217,UniParc:UPI0000036B99,UniRef:UniRef100_P9WIN5,UniRef:UniRef50_P9WIN5,UniRef:UniRef90_P9WIN5,VFDB:VFC0258,VFDB:VFG007878;ec_number=2.3.1.282
contig_1	Pyrodigal	gene	3272302	3278637	.	-	.	ID=GCA000153685_03081_gene;locus_tag=GCA000153685_03081;gene=mas
contig_1	Pyrodigal	CDS	3272302	3278637	.	-	0	ID=GCA000153685_03081;Name=multifunctional mycocerosic acid synthase;locus_tag=GCA000153685_03081;product=multifunctional mycocerosic acid synthase;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005886,GO:0006633,GO:0016491,GO:0016787,GO:0016874,GO:0031177,GO:0050111,GO:0071770;gene=mas;Parent=GCA000153685_03081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899551.1,SO:0001217,UniParc:UPI0000036BA0,UniRef:UniRef100_A5U6U7,UniRef:UniRef50_A0A089QRB9,UniRef:UniRef90_Q02251,VFDB:VFC0258,VFDB:VFG001408;ec_number=2.3.1.111
contig_1	Pyrodigal	gene	3279137	3280999	.	+	.	ID=GCA000153685_03082_gene;locus_tag=GCA000153685_03082;gene=fadD28
contig_1	Pyrodigal	CDS	3279137	3280999	.	+	0	ID=GCA000153685_03082;Name=long-chain-fatty-acid--AMP ligase FadD28;locus_tag=GCA000153685_03082;product=long-chain-fatty-acid--AMP ligase FadD28;Dbxref=GO:0004321,GO:0005524,GO:0005829,GO:0005886,GO:0006633,GO:0008610,GO:0016874,GO:0051701,GO:0052170,GO:0052572,GO:0070566,GO:0071770;gene=fadD28;Parent=GCA000153685_03082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12427,SO:0001217,UniParc:UPI0002FA47CE,UniRef:UniRef100_P9WQ59,UniRef:UniRef50_P9WQ59,UniRef:UniRef90_P9WQ59,VFDB:VFC0258,VFDB:VFG001409;ec_number=6.2.1.49
contig_1	Pyrodigal	gene	3280953	3283754	.	+	.	ID=GCA000153685_03083_gene;locus_tag=GCA000153685_03083;gene=mmpL7
contig_1	Pyrodigal	CDS	3280953	3283754	.	+	0	ID=GCA000153685_03083;Name=phthiocerol dimycocerosate RND transporter MmpL7;locus_tag=GCA000153685_03083;product=phthiocerol dimycocerosate RND transporter MmpL7;Dbxref=GO:0005886,GO:0006855,GO:0006869,GO:0008610,GO:0015245,GO:0051701,GO:0052572,GO:0071555;gene=mmpL7;Parent=GCA000153685_03083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414861,SO:0001217,UniParc:UPI00030B2909,UniRef:UniRef100_P9WJU7,UniRef:UniRef50_P9WJU7,UniRef:UniRef90_P9WJU7
contig_1	Pyrodigal	gene	3284386	3285627	.	+	.	ID=GCA000153685_03084_gene;locus_tag=GCA000153685_03084;gene=tnp
contig_1	Pyrodigal	CDS	3284386	3285627	.	+	0	ID=GCA000153685_03084;Name=IS21 family ISMbo1 transposase;locus_tag=GCA000153685_03084;product=IS21 family ISMbo1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_03084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISMbo1,RefSeq:WP_003414864.1,SO:0001217,UniParc:UPI00000D5EE2,UniRef:UniRef100_A5U6V0,UniRef:UniRef50_A0A8E2IUN5,UniRef:UniRef90_A5U6V0
contig_1	Pyrodigal	gene	3285889	3286428	.	+	.	ID=GCA000153685_03085_gene;locus_tag=GCA000153685_03085
contig_1	Pyrodigal	CDS	3285889	3286428	.	+	0	ID=GCA000153685_03085;Name=putative transposase for insertion sequence element IS1533;locus_tag=GCA000153685_03085;product=putative transposase for insertion sequence element IS1533;Parent=GCA000153685_03085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001AE5190,UniRef:UniRef100_P96287,UniRef:UniRef50_A0A2K4YG72,UniRef:UniRef90_P96287
contig_1	Pyrodigal	gene	3286546	3287247	.	-	.	ID=GCA000153685_03086_gene;locus_tag=GCA000153685_03086;gene=lppX
contig_1	Pyrodigal	CDS	3286546	3287247	.	-	0	ID=GCA000153685_03086;Name=lipoprotein LppX;locus_tag=GCA000153685_03086;product=lipoprotein LppX;Dbxref=GO:0005319,GO:0005576,GO:0005886,GO:0009274,GO:0009986,GO:0071770;gene=lppX;Parent=GCA000153685_03086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14954,RefSeq:WP_003414872.1,SO:0001217,UniParc:UPI000004A968,UniRef:UniRef100_P9WK65,UniRef:UniRef50_P9WK65,UniRef:UniRef90_P9WK65,VFDB:VFC0258,VFDB:VFG024714
contig_1	Pyrodigal	gene	3287425	3292224	.	-	.	ID=GCA000153685_03087_gene;locus_tag=GCA000153685_03087;gene=pks1
contig_1	Pyrodigal	CDS	3287425	3292224	.	-	0	ID=GCA000153685_03087;Name=polyketide synthase;locus_tag=GCA000153685_03087;product=polyketide synthase;Dbxref=GO:0004312,GO:0004315,GO:0006633,GO:0008610,GO:0016491,GO:0031177,GO:0034081,GO:0071766;gene=pks1;Parent=GCA000153685_03087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B44C9D,UniRef:UniRef100_Q7D6E1,UniRef:UniRef50_Q7TXK8,UniRef:UniRef90_Q7TXK8,VFDB:VFC0258,VFDB:VFG024730
contig_1	Pyrodigal	gene	3292272	3293741	.	-	.	ID=GCA000153685_03088_gene;locus_tag=GCA000153685_03088;gene=pks15
contig_1	Pyrodigal	CDS	3292272	3293741	.	-	0	ID=GCA000153685_03088;Name=polyketide synthase;locus_tag=GCA000153685_03088;product=polyketide synthase;Dbxref=GO:0004315,GO:0005829,GO:0006633,GO:0009247,GO:0016020;gene=pks15;Parent=GCA000153685_03088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE783,UniRef:UniRef100_Q7D6E0,UniRef:UniRef50_P96284,UniRef:UniRef90_P96284,VFDB:VFC0258,VFDB:VFG024724
contig_1	Infernal	gene	3292605	3292679	.	+	.	ID=GCA000153685_03089_gene;locus_tag=GCA000153685_03089;gene=ASpks
contig_1	Infernal	ncRNA	3292605	3292679	2.5e-12	+	.	ID=GCA000153685_03089;Name=ASpks TB sRNA;locus_tag=GCA000153685_03089;product=ASpks TB sRNA;Dbxref=RFAM:RF01782;Parent=GCA000153685_03089_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01782
contig_1	Pyrodigal	gene	3293759	3295876	.	-	.	ID=GCA000153685_03090_gene;locus_tag=GCA000153685_03090;gene=fadD22
contig_1	Pyrodigal	CDS	3293759	3295876	.	-	0	ID=GCA000153685_03090;Name=p-hydroxybenzoyl--AMP ligase;locus_tag=GCA000153685_03090;product=p-hydroxybenzoyl--AMP ligase;Dbxref=GO:0006633,GO:0008610,GO:0009247,GO:0016020,GO:0016874,GO:0016878,GO:0031177,GO:0044550,GO:0071766,GO:0097041;gene=fadD22;Parent=GCA000153685_03090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414884.1,SO:0001217,UniParc:UPI00000D5EF5,UniRef:UniRef100_P9WQ61,UniRef:UniRef50_P9WQ61,UniRef:UniRef90_P9WQ61,VFDB:VFC0258,VFDB:VFG024748;ec_number=6.2.1.50
contig_1	Pyrodigal	gene	3295893	3296492	.	-	.	ID=GCA000153685_03091_gene;locus_tag=GCA000153685_03091
contig_1	Pyrodigal	CDS	3295893	3296492	.	-	0	ID=GCA000153685_03091;Name=chorismate pyruvate-lyase;locus_tag=GCA000153685_03091;product=chorismate pyruvate-lyase;Dbxref=GO:0008813,GO:0046417,GO:0071770,GO:0072330;Parent=GCA000153685_03091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03181,RefSeq:WP_003414887.1,SO:0001217,UniParc:UPI0000165324,UniRef:UniRef100_P9WIC5,UniRef:UniRef50_P9WIC5,UniRef:UniRef90_P9WIC5,VFDB:VFC0258,VFDB:VFG024762;ec_number=4.1.3.40
contig_1	Pyrodigal	gene	3296518	3298377	.	-	.	ID=GCA000153685_03092_gene;locus_tag=GCA000153685_03092;gene=fadD29
contig_1	Pyrodigal	CDS	3296518	3298377	.	-	0	ID=GCA000153685_03092;Name=long-chain-fatty-acid--AMP ligase FadD29;locus_tag=GCA000153685_03092;product=long-chain-fatty-acid--AMP ligase FadD29;Dbxref=GO:0005524,GO:0006633,GO:0008610,GO:0016874,GO:0016878,GO:0070566,GO:0071766,GO:0097040;gene=fadD29;Parent=GCA000153685_03092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899553.1,SO:0001217,UniParc:UPI00000D501F,UniRef:UniRef100_P95141,UniRef:UniRef50_P95141,UniRef:UniRef90_P95141,VFDB:VFC0258,VFDB:VFG024776;ec_number=6.2.1.51
contig_1	Pyrodigal	gene	3299025	3300170	.	-	.	ID=GCA000153685_03093_gene;locus_tag=GCA000153685_03093
contig_1	Pyrodigal	CDS	3299025	3300170	.	-	0	ID=GCA000153685_03093;Name=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;locus_tag=GCA000153685_03093;product=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;Dbxref=GO:0005829,GO:0005886,GO:0006629,GO:0016705;Parent=GCA000153685_03093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414891,KEGG:K14728,RefSeq:WP_003414891.1,SO:0001217,UniParc:UPI00000D501E,UniRef:UniRef100_P9WIB7,UniRef:UniRef50_P9WIB7,UniRef:UniRef90_P9WIB7;ec_number=1.2.-.-
contig_1	Pyrodigal	gene	3300363	3301175	.	+	.	ID=GCA000153685_03094_gene;locus_tag=GCA000153685_03094
contig_1	Pyrodigal	CDS	3300363	3301175	.	+	0	ID=GCA000153685_03094;Name=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;locus_tag=GCA000153685_03094;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;Dbxref=GO:0006629,GO:0008757,GO:0032259,GO:0071770;Parent=GCA000153685_03094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414900,RefSeq:WP_003414900.1,SO:0001217,UniParc:UPI00000D10C0,UniRef:UniRef100_P9WIN3,UniRef:UniRef50_P9WIN3,UniRef:UniRef90_P9WIN3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3301201	3302457	.	+	.	ID=GCA000153685_03095_gene;locus_tag=GCA000153685_03095
contig_1	Pyrodigal	CDS	3301201	3302457	.	+	0	ID=GCA000153685_03095;Name=trans-acting enoyl reductase;locus_tag=GCA000153685_03095;product=trans-acting enoyl reductase;Dbxref=GO:0005886,GO:0009247,GO:0009274,GO:0016491,GO:0071770;Parent=GCA000153685_03095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414903,KEGG:K12445,RefSeq:WP_003414903.1,SO:0001217,UniParc:UPI00000D10D1,UniRef:UniRef100_P9WGV5,UniRef:UniRef50_P9WGV5,UniRef:UniRef90_P9WGV5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	3302588	3303313	.	-	.	ID=GCA000153685_03096_gene;locus_tag=GCA000153685_03096
contig_1	Pyrodigal	CDS	3302588	3303313	.	-	0	ID=GCA000153685_03096;Name=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;locus_tag=GCA000153685_03096;product=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;Parent=GCA000153685_03096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414905,RefSeq:WP_003414905.1,SO:0001217,UniParc:UPI00000C14A0,UniRef:UniRef100_I6X5U4,UniRef:UniRef50_I6X5U4,UniRef:UniRef90_I6X5U4
contig_1	Pyrodigal	gene	3303502	3304308	.	-	.	ID=GCA000153685_03097_gene;locus_tag=GCA000153685_03097
contig_1	Pyrodigal	CDS	3303502	3304308	.	-	0	ID=GCA000153685_03097;Name=Conserved protein;locus_tag=GCA000153685_03097;product=Conserved protein;Parent=GCA000153685_03097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E314A2,UniRef:UniRef100_A0A0H3LDA7,UniRef:UniRef50_P95137,UniRef:UniRef90_P95137
contig_1	Pyrodigal	gene	3304590	3305321	.	+	.	ID=GCA000153685_03098_gene;locus_tag=GCA000153685_03098
contig_1	Pyrodigal	CDS	3304590	3305321	.	+	0	ID=GCA000153685_03098;Name=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;locus_tag=GCA000153685_03098;product=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;Parent=GCA000153685_03098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899556,RefSeq:WP_003899556.1,SO:0001217,UniParc:UPI00000D117E,UniRef:UniRef100_I6Y242,UniRef:UniRef50_Q740V9,UniRef:UniRef90_R4LYP5
contig_1	Pyrodigal	gene	3305392	3306219	.	+	.	ID=GCA000153685_03099_gene;locus_tag=GCA000153685_03099
contig_1	Pyrodigal	CDS	3305392	3306219	.	+	0	ID=GCA000153685_03099;Name=PGL/p-HBAD biosynthesis glycosyltransferase;locus_tag=GCA000153685_03099;product=PGL/p-HBAD biosynthesis glycosyltransferase;Dbxref=GO:0009247,GO:0016020,GO:0016757,GO:0016758;Parent=GCA000153685_03099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414909.1,SO:0001217,UniParc:UPI000002E8B6,UniRef:UniRef100_P9WMX7,UniRef:UniRef50_P9WMX7,UniRef:UniRef90_P9WMX7,VFDB:VFC0258,VFDB:VFG007946;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3306636	3307922	.	-	.	ID=GCA000153685_03100_gene;locus_tag=GCA000153685_03100
contig_1	Pyrodigal	CDS	3306636	3307922	.	-	0	ID=GCA000153685_03100;Name=PGL/p-HBAD biosynthesis glycosyltransferase;locus_tag=GCA000153685_03100;product=PGL/p-HBAD biosynthesis glycosyltransferase;Dbxref=GO:0005886,GO:0008194,GO:0009247,GO:0016758;Parent=GCA000153685_03100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899557,RefSeq:WP_003899557.1,SO:0001217,UniParc:UPI00000D5F75,UniRef:UniRef100_P9WFR1,UniRef:UniRef50_P9WFR1,UniRef:UniRef90_P9WFR1;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3308023	3308760	.	-	.	ID=GCA000153685_03101_gene;locus_tag=GCA000153685_03101
contig_1	Pyrodigal	CDS	3308023	3308760	.	-	0	ID=GCA000153685_03101;Name=rhamnosyl O-methyltransferase;locus_tag=GCA000153685_03101;product=rhamnosyl O-methyltransferase;Dbxref=GO:0005886,GO:0008168,GO:0008610,GO:0008757,GO:0030206,GO:0032259,GO:0071770;Parent=GCA000153685_03101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414919,RefSeq:WP_003414919.1,SO:0001217,UniParc:UPI00000D0F3D,UniRef:UniRef100_P9WIM5,UniRef:UniRef50_P9WIM5,UniRef:UniRef90_P9WIM5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3309205	3309594	.	+	.	ID=GCA000153685_03102_gene;locus_tag=GCA000153685_03102
contig_1	Pyrodigal	CDS	3309205	3309594	.	+	0	ID=GCA000153685_03102;Name=Transposase;locus_tag=GCA000153685_03102;product=Transposase;Parent=GCA000153685_03102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414921.1,SO:0001217,UniParc:UPI00000C14EF,UniRef:UniRef100_A0A0H3LEG0,UniRef:UniRef50_K8XHU4,UniRef:UniRef90_A0A0H3LEG0
contig_1	Pyrodigal	gene	3309695	3311044	.	-	.	ID=GCA000153685_03103_gene;locus_tag=GCA000153685_03103
contig_1	Pyrodigal	CDS	3309695	3311044	.	-	0	ID=GCA000153685_03103;Name=PGL/p-HBAD biosynthesis rhamnosyltransferase;locus_tag=GCA000153685_03103;product=PGL/p-HBAD biosynthesis rhamnosyltransferase;Dbxref=GO:0005886,GO:0008194,GO:0009247,GO:0016758;Parent=GCA000153685_03103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003414922,RefSeq:WP_003414922.1,SO:0001217,UniParc:UPI00000D5E55,UniRef:UniRef100_P9WN09,UniRef:UniRef50_P9WFR1,UniRef:UniRef90_P9WN09;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	3311158	3312378	.	+	.	ID=GCA000153685_03104_gene;locus_tag=GCA000153685_03104
contig_1	Pyrodigal	CDS	3311158	3312378	.	+	0	ID=GCA000153685_03104;Name=Putative permease Rv2963;locus_tag=GCA000153685_03104;product=Putative permease Rv2963;Dbxref=GO:0005886;Parent=GCA000153685_03104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07089,RefSeq:WP_003414924.1,SO:0001217,UniParc:UPI00000D118E,UniRef:UniRef100_I6YET7,UniRef:UniRef50_I6YET7,UniRef:UniRef90_I6YET7
contig_1	Pyrodigal	gene	3312451	3313383	.	+	.	ID=GCA000153685_03105_gene;locus_tag=GCA000153685_03105;gene=purU
contig_1	Pyrodigal	CDS	3312451	3313383	.	+	0	ID=GCA000153685_03105;Name=formyltetrahydrofolate deformylase;locus_tag=GCA000153685_03105;product=formyltetrahydrofolate deformylase;Dbxref=GO:0006189,GO:0006730,GO:0008864;gene=purU;Parent=GCA000153685_03105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899559.1,SO:0001217,UniParc:UPI0000132B74,UniRef:UniRef100_P9WHM3,UniRef:UniRef50_P9WHM3,UniRef:UniRef90_P9WHM3;ec_number=3.5.1.10
contig_1	Pyrodigal	gene	3314023	3314208	.	+	.	ID=GCA000153685_03106_gene;locus_tag=GCA000153685_03106
contig_1	Pyrodigal	CDS	3314023	3314208	.	+	0	ID=GCA000153685_03106;Name=hypothetical protein;locus_tag=GCA000153685_03106;product=hypothetical protein;Parent=GCA000153685_03106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003414994.1,SO:0001217,UniParc:UPI00005EE78F,UniRef:UniRef100_A5U6X3,UniRef:UniRef50_A5U6X3,UniRef:UniRef90_A5U6X3
contig_1	Pyrodigal	gene	3314252	3314737	.	-	.	ID=GCA000153685_03107_gene;locus_tag=GCA000153685_03107;gene=coaD
contig_1	Pyrodigal	CDS	3314252	3314737	.	-	0	ID=GCA000153685_03107;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000153685_03107;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000153685_03107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_003414998.1,SO:0001217,UniParc:UPI0000127CBF,UniRef:UniRef100_P9WPA5,UniRef:UniRef50_P9WPA5,UniRef:UniRef90_P9WPA5;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	3314823	3315389	.	-	.	ID=GCA000153685_03108_gene;locus_tag=GCA000153685_03108;gene=rsmD
contig_1	Pyrodigal	CDS	3314823	3315389	.	-	0	ID=GCA000153685_03108;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA000153685_03108;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0003676,GO:0005576,GO:0008168,GO:0030430,GO:0031167,GO:0044196,GO:0052913;gene=rsmD;Parent=GCA000153685_03108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08316,RefSeq:WP_003415001.1,SO:0001217,UniParc:UPI00000D10B6,UniRef:UniRef100_I6XFS7,UniRef:UniRef50_I6XFS7,UniRef:UniRef90_I6XFS7;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	3315585	3318968	.	-	.	ID=GCA000153685_03109_gene;locus_tag=GCA000153685_03109
contig_1	Pyrodigal	CDS	3315585	3318968	.	-	0	ID=GCA000153685_03109;Name=pyruvate carboxylase;locus_tag=GCA000153685_03109;product=pyruvate carboxylase;Dbxref=GO:0004736,GO:0005524,GO:0006090,GO:0006094,GO:0009374,GO:0046872;Parent=GCA000153685_03109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01958,RefSeq:WP_003415003.1,SO:0001217,UniParc:UPI00000D5F47,UniRef:UniRef100_I6YEU0,UniRef:UniRef50_A0R6R9,UniRef:UniRef90_I6YEU0;ec_number=6.4.1.1
contig_1	Pyrodigal	gene	3318993	3319580	.	-	.	ID=GCA000153685_03110_gene;locus_tag=GCA000153685_03110
contig_1	Pyrodigal	CDS	3318993	3319580	.	-	0	ID=GCA000153685_03110;Name=Vitamin K epoxide reductase domain-containing protein;locus_tag=GCA000153685_03110;product=Vitamin K epoxide reductase domain-containing protein;Parent=GCA000153685_03110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE792,UniRef:UniRef100_A0A0E8W8R9,UniRef:UniRef50_A0A1B7UDT1,UniRef:UniRef90_R4LYQ9
contig_1	Pyrodigal	gene	3319631	3320398	.	-	.	ID=GCA000153685_03111_gene;locus_tag=GCA000153685_03111
contig_1	Pyrodigal	CDS	3319631	3320398	.	-	0	ID=GCA000153685_03111;Name=mycothiol-dependent reductase;locus_tag=GCA000153685_03111;product=mycothiol-dependent reductase;Parent=GCA000153685_03111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415010,RefSeq:WP_003415010.1,SO:0001217,UniParc:UPI0000165327,UniRef:UniRef100_O33272,UniRef:UniRef90_O33272
contig_1	Pyrodigal	gene	3320495	3321625	.	-	.	ID=GCA000153685_03112_gene;locus_tag=GCA000153685_03112;gene=lipN
contig_1	Pyrodigal	CDS	3320495	3321625	.	-	0	ID=GCA000153685_03112;Name=lipase/esterase LipN;locus_tag=GCA000153685_03112;product=lipase/esterase LipN;Dbxref=GO:0005737,GO:0005886,GO:0008126,GO:0034338,GO:0106435;gene=lipN;Parent=GCA000153685_03112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415015,RefSeq:WP_003415015.1,SO:0001217,UniParc:UPI00000D501D,UniRef:UniRef100_P95125,UniRef:UniRef50_P95125,UniRef:UniRef90_P95125;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3322023	3322871	.	+	.	ID=GCA000153685_03113_gene;locus_tag=GCA000153685_03113
contig_1	Pyrodigal	CDS	3322023	3322871	.	+	0	ID=GCA000153685_03113;Name=Aldo-keto reductase Rv2971;locus_tag=GCA000153685_03113;product=Aldo-keto reductase Rv2971;Dbxref=GO:0004032,GO:0005829,GO:0005886,GO:0009274,GO:0044281;Parent=GCA000153685_03113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899563.1,SO:0001217,UniParc:UPI00000D600C,UniRef:UniRef100_P9WQA5,UniRef:UniRef50_P9WQA5,UniRef:UniRef90_P9WQA5;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3322945	3323658	.	-	.	ID=GCA000153685_03114_gene;locus_tag=GCA000153685_03114
contig_1	Pyrodigal	CDS	3322945	3323658	.	-	0	ID=GCA000153685_03114;Name=GmrSD restriction endonucleases C-terminal domain-containing protein;locus_tag=GCA000153685_03114;product=GmrSD restriction endonucleases C-terminal domain-containing protein;Parent=GCA000153685_03114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415024.1,SO:0001217,UniParc:UPI00000D105A,UniRef:UniRef100_I6X5W6,UniRef:UniRef50_H8II51,UniRef:UniRef90_R4M5Z0
contig_1	Pyrodigal	gene	3323655	3325868	.	-	.	ID=GCA000153685_03115_gene;locus_tag=GCA000153685_03115;gene=recG
contig_1	Pyrodigal	CDS	3323655	3325868	.	-	0	ID=GCA000153685_03115;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000153685_03115;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005886,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000153685_03115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415026.1,SO:0001217,UniParc:UPI000013357D,UniRef:UniRef100_P9WMQ7,UniRef:UniRef50_P9WMQ7,UniRef:UniRef90_P9WMQ7;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3325871	3327283	.	-	.	ID=GCA000153685_03116_gene;locus_tag=GCA000153685_03116;gene=dhaL
contig_1	Pyrodigal	CDS	3325871	3327283	.	-	0	ID=GCA000153685_03116;Name=DhaL domain-containing protein;locus_tag=GCA000153685_03116;product=DhaL domain-containing protein;gene=dhaL;Parent=GCA000153685_03116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415028.1,SO:0001217,UniParc:UPI00000D117D,UniRef:UniRef100_P95121,UniRef:UniRef50_P95121,UniRef:UniRef90_P95121
contig_1	Pyrodigal	gene	3327280	3327534	.	-	.	ID=GCA000153685_03117_gene;locus_tag=GCA000153685_03117;gene=dhaL
contig_1	Pyrodigal	CDS	3327280	3327534	.	-	0	ID=GCA000153685_03117;Name=DhaL domain-containing protein;locus_tag=GCA000153685_03117;product=DhaL domain-containing protein;gene=dhaL;Parent=GCA000153685_03117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003906954.1,SO:0001217,UniParc:UPI000011D95E,UniRef:UniRef100_P95120,UniRef:UniRef50_P95120,UniRef:UniRef90_P95120
contig_1	Pyrodigal	gene	3327776	3327970	.	+	.	ID=GCA000153685_03118_gene;locus_tag=GCA000153685_03118;gene=rpmB
contig_1	Pyrodigal	CDS	3327776	3327970	.	+	0	ID=GCA000153685_03118;Name=50S ribosomal protein L28;locus_tag=GCA000153685_03118;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000153685_03118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_003415030.1,SO:0001217,UniParc:UPI00000D2D32,UniRef:UniRef100_P0DV54,UniRef:UniRef50_P0DV54,UniRef:UniRef90_P0DV54
contig_1	Pyrodigal	gene	3327993	3328676	.	-	.	ID=GCA000153685_03119_gene;locus_tag=GCA000153685_03119;gene=ung
contig_1	Pyrodigal	CDS	3327993	3328676	.	-	0	ID=GCA000153685_03119;Name=uracil-DNA glycosylase;locus_tag=GCA000153685_03119;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0097510;gene=ung;Parent=GCA000153685_03119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03648,RefSeq:WP_003899565.1,SO:0001217,UniParc:UPI0000137C7B,UniRef:UniRef100_P9WFQ9,UniRef:UniRef50_P9WFQ9,UniRef:UniRef90_P9WFQ9;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	3328709	3329710	.	-	.	ID=GCA000153685_03120_gene;locus_tag=GCA000153685_03120;gene=thiL
contig_1	Pyrodigal	CDS	3328709	3329710	.	-	0	ID=GCA000153685_03120;Name=thiamine-phosphate kinase;locus_tag=GCA000153685_03120;product=thiamine-phosphate kinase;Dbxref=GO:0000287,GO:0005524,GO:0009030,GO:0009228,GO:0009229;gene=thiL;Parent=GCA000153685_03120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00946,RefSeq:WP_003415034.1,SO:0001217,UniParc:UPI00000D5E35,UniRef:UniRef100_P9WG71,UniRef:UniRef50_P9WG71,UniRef:UniRef90_P9WG71;ec_number=2.7.4.16
contig_1	Pyrodigal	gene	3329707	3331086	.	-	.	ID=GCA000153685_03121_gene;locus_tag=GCA000153685_03121;gene=tnpB
contig_1	Pyrodigal	CDS	3329707	3331086	.	-	0	ID=GCA000153685_03121;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_03121;product=IS607 family element RNA-guided endonuclease TnpB;gene=tnpB;Parent=GCA000153685_03121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415037.1,SO:0001217,UniParc:UPI00000D5F21,UniRef:UniRef100_A5U6Y9,UniRef:UniRef50_P9WL37,UniRef:UniRef90_A5U6Y9
contig_1	Pyrodigal	gene	3331086	3331670	.	-	.	ID=GCA000153685_03122_gene;locus_tag=GCA000153685_03122;gene=tnp
contig_1	Pyrodigal	CDS	3331086	3331670	.	-	0	ID=GCA000153685_03122;Name=IS607 family IS1538 transposase;locus_tag=GCA000153685_03122;product=IS607 family IS1538 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_03122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1538,RefSeq:WP_003899566.1,SO:0001217,UniParc:UPI00000D5FF7,UniRef:UniRef100_A5U6Z0,UniRef:UniRef50_A0A498PR97,UniRef:UniRef90_A5U6Z0
contig_1	Pyrodigal	gene	3331852	3332427	.	+	.	ID=GCA000153685_03123_gene;locus_tag=GCA000153685_03123
contig_1	Pyrodigal	CDS	3331852	3332427	.	+	0	ID=GCA000153685_03123;Name=DUF3515 domain-containing protein;locus_tag=GCA000153685_03123;product=DUF3515 domain-containing protein;Parent=GCA000153685_03123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899567.1,SO:0001217,UniParc:UPI00005F636A,UniRef:UniRef100_A0A0H3LD63,UniRef:UniRef50_A0A0T1WLM5,UniRef:UniRef90_Q7D6B4
contig_1	Pyrodigal	gene	3332894	3333970	.	-	.	ID=GCA000153685_03124_gene;locus_tag=GCA000153685_03124;gene=ddlA
contig_1	Pyrodigal	CDS	3332894	3333970	.	-	0	ID=GCA000153685_03124;Name=D-alanine--D-alanine ligase DdlA;locus_tag=GCA000153685_03124;product=D-alanine--D-alanine ligase DdlA;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddlA;Parent=GCA000153685_03124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912011,SO:0001217,UniParc:UPI00005F636B,UniRef:UniRef100_A0A0E8U2E5,UniRef:UniRef50_P9WP31,UniRef:UniRef90_P9WP31;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	3334093	3335097	.	-	.	ID=GCA000153685_03125_gene;locus_tag=GCA000153685_03125;gene=gpsA2
contig_1	Pyrodigal	CDS	3334093	3335097	.	-	0	ID=GCA000153685_03125;Name=Glycerol-3-phosphate dehydrogenase [NAD(P)+] 2;locus_tag=GCA000153685_03125;product=Glycerol-3-phosphate dehydrogenase [NAD(P)+] 2;Dbxref=GO:0005829,GO:0005886,GO:0005975,GO:0006072,GO:0006650,GO:0008654,GO:0046167,GO:0046168,GO:0047952,GO:0051287;gene=gpsA2;Parent=GCA000153685_03125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415091.1,SO:0001217,UniParc:UPI0000165162,UniRef:UniRef100_P59961,UniRef:UniRef50_P9WN77,UniRef:UniRef90_P9WN77;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	3335216	3335860	.	+	.	ID=GCA000153685_03126_gene;locus_tag=GCA000153685_03126;gene=cofC
contig_1	Pyrodigal	CDS	3335216	3335860	.	+	0	ID=GCA000153685_03126;Name=2-phospho-L-lactate guanylyltransferase;locus_tag=GCA000153685_03126;product=2-phospho-L-lactate guanylyltransferase;Dbxref=GO:0005525,GO:0043814,GO:0052645;gene=cofC;Parent=GCA000153685_03126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14941,RefSeq:WP_003415094.1,SO:0001217,UniParc:UPI00000D0F78,UniRef:UniRef100_P9WP83,UniRef:UniRef50_A0QUZ4,UniRef:UniRef90_P9WP83;ec_number=2.7.7.68
contig_1	Pyrodigal	gene	3335952	3338180	.	+	.	ID=GCA000153685_03127_gene;locus_tag=GCA000153685_03127;gene=ppk
contig_1	Pyrodigal	CDS	3335952	3338180	.	+	0	ID=GCA000153685_03127;Name=RNA degradosome polyphosphate kinase;locus_tag=GCA000153685_03127;product=RNA degradosome polyphosphate kinase;Dbxref=GO:0005524,GO:0006799,GO:0008976,GO:0009358,GO:0046872;gene=ppk;Parent=GCA000153685_03127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00937,RefSeq:WP_015345149.1,SO:0001217,UniParc:UPI000169A494,UniRef:UniRef100_A0A0H3LKC4,UniRef:UniRef50_P9WHV9,UniRef:UniRef90_P9WHV9;ec_number=2.7.4.1
contig_1	Pyrodigal	gene	3338263	3339216	.	+	.	ID=GCA000153685_03128_gene;locus_tag=GCA000153685_03128;gene=mutT1
contig_1	Pyrodigal	CDS	3338263	3339216	.	+	0	ID=GCA000153685_03128;Name=8-oxo-(d)GTP phosphatase;locus_tag=GCA000153685_03128;product=8-oxo-(d)GTP phosphatase;Dbxref=GO:0006260,GO:0006281,GO:0008413,GO:0046872;gene=mutT1;Parent=GCA000153685_03128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23258,RefSeq:WP_003899569.1,SO:0001217,UniParc:UPI00000D5F71,UniRef:UniRef100_P9WIY3,UniRef:UniRef50_P9WIY3,UniRef:UniRef90_P9WIY3;ec_number=3.6.1.69
contig_1	Pyrodigal	gene	3339274	3339918	.	-	.	ID=GCA000153685_03129_gene;locus_tag=GCA000153685_03129;gene=hupB
contig_1	Pyrodigal	CDS	3339274	3339918	.	-	0	ID=GCA000153685_03129;Name=DNA-binding protein HupB;locus_tag=GCA000153685_03129;product=DNA-binding protein HupB;Dbxref=GO:0000976,GO:0001216,GO:0003677,GO:0003684,GO:0003690,GO:0004322,GO:0005576,GO:0005829,GO:0005886,GO:0006826,GO:0008199,GO:0009274,GO:0009295,GO:0010106,GO:0030261,GO:0030527,GO:0032993,GO:0042262,GO:0045893,GO:0071555,GO:0090143,GO:0097100,GO:0098785;gene=hupB;Parent=GCA000153685_03129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415107,RefSeq:WP_003415107.1,SO:0001217,UniParc:UPI0000128F15,UniRef:UniRef100_P9WMK7,UniRef:UniRef50_P9WMK7,UniRef:UniRef90_P9WMK7;ec_number=1.16.3.1
contig_1	Pyrodigal	gene	3340131	3340727	.	-	.	ID=GCA000153685_03130_gene;locus_tag=GCA000153685_03130;gene=leuD
contig_1	Pyrodigal	CDS	3340131	3340727	.	-	0	ID=GCA000153685_03130;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000153685_03130;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0005886,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000153685_03130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415110.1,SO:0001217,UniParc:UPI000012E58F,UniRef:UniRef100_P9WK95,UniRef:UniRef50_P9WK95,UniRef:UniRef90_P9WK95;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	3340752	3342173	.	-	.	ID=GCA000153685_03131_gene;locus_tag=GCA000153685_03131;gene=leuC
contig_1	Pyrodigal	CDS	3340752	3342173	.	-	0	ID=GCA000153685_03131;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000153685_03131;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0009274,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000153685_03131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01703,RefSeq:WP_003899570.1,SO:0001217,UniParc:UPI000012E504,UniRef:UniRef100_P9WQF5,UniRef:UniRef50_P80858,UniRef:UniRef90_P9WQF5;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	3342245	3342946	.	+	.	ID=GCA000153685_03132_gene;locus_tag=GCA000153685_03132;gene=iclR
contig_1	Pyrodigal	CDS	3342245	3342946	.	+	0	ID=GCA000153685_03132;Name=IclR family transcriptional regulator;locus_tag=GCA000153685_03132;product=IclR family transcriptional regulator;gene=iclR;Parent=GCA000153685_03132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415115.1,SO:0001217,UniParc:UPI0000165329,UniRef:UniRef100_A5U700,UniRef:UniRef50_Q73VI6,UniRef:UniRef90_A5U700
contig_1	Pyrodigal	gene	3342957	3343817	.	-	.	ID=GCA000153685_03133_gene;locus_tag=GCA000153685_03133
contig_1	Pyrodigal	CDS	3342957	3343817	.	-	0	ID=GCA000153685_03133;Name=Class I SAM-dependent methyltransferase;locus_tag=GCA000153685_03133;product=Class I SAM-dependent methyltransferase;Parent=GCA000153685_03133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415118.1,SO:0001217,UniParc:UPI00000D0FB7,UniRef:UniRef100_I6YEW1,UniRef:UniRef50_A0A7I9XNV2,UniRef:UniRef90_I6YEW1
contig_1	Pyrodigal	gene	3344080	3344571	.	+	.	ID=GCA000153685_03134_gene;locus_tag=GCA000153685_03134
contig_1	Pyrodigal	CDS	3344080	3344571	.	+	0	ID=GCA000153685_03134;Name=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;locus_tag=GCA000153685_03134;product=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;Parent=GCA000153685_03134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899572.1,SO:0001217,UniParc:UPI00000CCB60,UniRef:UniRef100_O53240,UniRef:UniRef50_A0A1E3TIQ3,UniRef:UniRef90_A0A498PU17
contig_1	tRNAscan-SE	gene	3344645	3344717	.	-	.	ID=GCA000153685_03135_gene;locus_tag=GCA000153685_03135;gene=trnE
contig_1	tRNAscan-SE	tRNA	3344645	3344717	.	-	.	ID=GCA000153685_03135;Name=tRNA-Glu(ctc);locus_tag=GCA000153685_03135;product=tRNA-Glu(ctc);gene=trnE;anti_codon=ctc;amino_acid=Glu;Parent=GCA000153685_03135_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	3344757	3344828	.	-	.	ID=GCA000153685_03136_gene;locus_tag=GCA000153685_03136;gene=trnQ
contig_1	tRNAscan-SE	tRNA	3344757	3344828	.	-	.	ID=GCA000153685_03136;Name=tRNA-Gln(ctg);locus_tag=GCA000153685_03136;product=tRNA-Gln(ctg);gene=trnQ;anti_codon=ctg;amino_acid=Gln;Parent=GCA000153685_03136_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	Pyrodigal	gene	3344903	3346375	.	-	.	ID=GCA000153685_03137_gene;locus_tag=GCA000153685_03137;gene=gltX
contig_1	Pyrodigal	CDS	3344903	3346375	.	-	0	ID=GCA000153685_03137;Name=glutamate--tRNA ligase;locus_tag=GCA000153685_03137;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0005886,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000153685_03137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415122.1,SO:0001217,UniParc:UPI00001363EC,UniRef:UniRef100_P9WFV9,UniRef:UniRef50_P9WFV9,UniRef:UniRef90_P9WFV9;ec_number=6.1.1.17
contig_1	Pyrodigal	gene	3346372	3347217	.	-	.	ID=GCA000153685_03138_gene;locus_tag=GCA000153685_03138
contig_1	Pyrodigal	CDS	3346372	3347217	.	-	0	ID=GCA000153685_03138;Name=Protein Rv2993c;locus_tag=GCA000153685_03138;product=Protein Rv2993c;Dbxref=GO:0018773,GO:0046872;Parent=GCA000153685_03138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE79B,UniRef:UniRef100_A0A0H3LEJ9,UniRef:UniRef50_I6Y276,UniRef:UniRef90_I6Y276
contig_1	Pyrodigal	gene	3347409	3348704	.	+	.	ID=GCA000153685_03139_gene;locus_tag=GCA000153685_03139
contig_1	Pyrodigal	CDS	3347409	3348704	.	+	0	ID=GCA000153685_03139;Name=putative MFS-type transporter Rv2994;locus_tag=GCA000153685_03139;product=putative MFS-type transporter Rv2994;Dbxref=GO:0005576,GO:0005886,GO:0022857;Parent=GCA000153685_03139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E3B0B5,UniRef:UniRef100_P9WJW7,UniRef:UniRef50_P9WJW7,UniRef:UniRef90_P9WJW7
contig_1	Pyrodigal	gene	3348556	3349566	.	-	.	ID=GCA000153685_03140_gene;locus_tag=GCA000153685_03140;gene=leuB
contig_1	Pyrodigal	CDS	3348556	3349566	.	-	0	ID=GCA000153685_03140;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000153685_03140;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0000287,GO:0003862,GO:0005737,GO:0009098,GO:0051287;gene=leuB;Parent=GCA000153685_03140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00052,RefSeq:WP_003899576.1,SO:0001217,UniParc:UPI000012E551,UniRef:UniRef100_P9WKK9,UniRef:UniRef50_P9WKK9,UniRef:UniRef90_P9WKK9;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	3349581	3351152	.	-	.	ID=GCA000153685_03141_gene;locus_tag=GCA000153685_03141;gene=serA
contig_1	Pyrodigal	CDS	3349581	3351152	.	-	0	ID=GCA000153685_03141;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000153685_03141;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0005886,GO:0006564,GO:0009274,GO:0051287;gene=serA;Parent=GCA000153685_03141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE79D,UniRef:UniRef100_A0A0E7YYB9,UniRef:UniRef50_P9WNX3,UniRef:UniRef90_P9WNX3;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	3351197	3352639	.	+	.	ID=GCA000153685_03142_gene;locus_tag=GCA000153685_03142
contig_1	Pyrodigal	CDS	3351197	3352639	.	+	0	ID=GCA000153685_03142;Name=Dehydrogenase;locus_tag=GCA000153685_03142;product=Dehydrogenase;Parent=GCA000153685_03142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415150.1,SO:0001217,UniParc:UPI00000D5EF9,UniRef:UniRef100_I6YAU3,UniRef:UniRef50_Q73VH9,UniRef:UniRef90_A0A654TIR8
contig_1	Pyrodigal	gene	3352913	3353374	.	+	.	ID=GCA000153685_03143_gene;locus_tag=GCA000153685_03143
contig_1	Pyrodigal	CDS	3352913	3353374	.	+	0	ID=GCA000153685_03143;Name=hypothetical protein;locus_tag=GCA000153685_03143;product=hypothetical protein;Parent=GCA000153685_03143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899579.1,SO:0001217,UniParc:UPI00000C1532,UniRef:UniRef100_O53245,UniRef:UniRef50_O53245,UniRef:UniRef90_O53245
contig_1	Pyrodigal	gene	3353350	3353652	.	+	.	ID=GCA000153685_03144_gene;locus_tag=GCA000153685_03144
contig_1	Pyrodigal	CDS	3353350	3353652	.	+	0	ID=GCA000153685_03144;Name=Transposase;locus_tag=GCA000153685_03144;product=Transposase;Parent=GCA000153685_03144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900611.1,SO:0001217,UniParc:UPI00000D2D37,UniRef:UniRef100_A0A0H3LKE3,UniRef:UniRef50_A0A0H3LKE3,UniRef:UniRef90_A0A0H3LKE3
contig_1	Pyrodigal	gene	3353700	3354665	.	+	.	ID=GCA000153685_03145_gene;locus_tag=GCA000153685_03145;gene=lppY
contig_1	Pyrodigal	CDS	3353700	3354665	.	+	0	ID=GCA000153685_03145;Name=Lipoprotein LppY;locus_tag=GCA000153685_03145;product=Lipoprotein LppY;gene=lppY;Parent=GCA000153685_03145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901513.1,SO:0001217,UniParc:UPI00001A9199,UniRef:UniRef100_Q8VJ92,UniRef:UniRef50_A0A7Z0DTI7,UniRef:UniRef90_A0A2I7WB86
contig_1	Pyrodigal	gene	3354710	3355369	.	+	.	ID=GCA000153685_03146_gene;locus_tag=GCA000153685_03146
contig_1	Pyrodigal	CDS	3354710	3355369	.	+	0	ID=GCA000153685_03146;Name=putative conserved transmembrane protein;locus_tag=GCA000153685_03146;product=putative conserved transmembrane protein;Parent=GCA000153685_03146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02069,RefSeq:WP_003415160.1,SO:0001217,UniParc:UPI00000D5E81,UniRef:UniRef100_I6X5Z8,UniRef:UniRef50_I6X5Z8,UniRef:UniRef90_I6X5Z8
contig_1	Pyrodigal	gene	3355418	3355516	.	-	.	ID=GCA000153685_03147_gene;locus_tag=GCA000153685_03147
contig_1	Pyrodigal	CDS	3355418	3355516	.	-	0	ID=GCA000153685_03147;Name=Exported protein;locus_tag=GCA000153685_03147;product=Exported protein;Parent=GCA000153685_03147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A4E0,UniRef:UniRef100_A0A0E8VGT4,UniRef:UniRef50_A5U712,UniRef:UniRef90_A5U712
contig_1	Pyrodigal	gene	3355683	3356696	.	-	.	ID=GCA000153685_03148_gene;locus_tag=GCA000153685_03148;gene=ilvC
contig_1	Pyrodigal	CDS	3355683	3356696	.	-	0	ID=GCA000153685_03148;Name=ketol-acid reductoisomerase;locus_tag=GCA000153685_03148;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009097,GO:0009099,GO:0050661;gene=ilvC;Parent=GCA000153685_03148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00053,SO:0001217,UniParc:UPI0000165165,UniRef:UniRef100_P9WKJ7,UniRef:UniRef50_P9WKJ7,UniRef:UniRef90_P9WKJ7;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	3356722	3357228	.	-	.	ID=GCA000153685_03149_gene;locus_tag=GCA000153685_03149;gene=ilvN
contig_1	Pyrodigal	CDS	3356722	3357228	.	-	0	ID=GCA000153685_03149;Name=acetolactate synthase small subunit;locus_tag=GCA000153685_03149;product=acetolactate synthase small subunit;Dbxref=GO:0003984,GO:0005829,GO:0005886,GO:0009082,GO:0009097,GO:0009099,GO:0009274,GO:1990610;gene=ilvN;Parent=GCA000153685_03149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01653,RefSeq:WP_003415167.1,SO:0001217,UniParc:UPI000012D5B5,UniRef:UniRef100_P65162,UniRef:UniRef50_P65162,UniRef:UniRef90_P65162;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3357228	3359084	.	-	.	ID=GCA000153685_03150_gene;locus_tag=GCA000153685_03150;gene=ilvB1
contig_1	Pyrodigal	CDS	3357228	3359084	.	-	0	ID=GCA000153685_03150;Name=acetolactate synthase large subunit;locus_tag=GCA000153685_03150;product=acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009082,GO:0009097,GO:0009099,GO:0009274,GO:0030976,GO:0050660;gene=ilvB1;Parent=GCA000153685_03150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_003415168.1,SO:0001217,UniParc:UPI000012D536,UniRef:UniRef100_P9WG41,UniRef:UniRef50_P9WG41,UniRef:UniRef90_P9WG41;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3359446	3359784	.	+	.	ID=GCA000153685_03151_gene;locus_tag=GCA000153685_03151;gene=cfp6
contig_1	Pyrodigal	CDS	3359446	3359784	.	+	0	ID=GCA000153685_03151;Name=Low molecular weight protein antigen 6;locus_tag=GCA000153685_03151;product=Low molecular weight protein antigen 6;Dbxref=GO:0005576;gene=cfp6;Parent=GCA000153685_03151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415170.1,SO:0001217,UniParc:UPI000012754B,UniRef:UniRef100_P9WIR1,UniRef:UniRef50_P9WIR1,UniRef:UniRef90_P9WIR1
contig_1	Pyrodigal	gene	3359791	3360576	.	-	.	ID=GCA000153685_03152_gene;locus_tag=GCA000153685_03152;gene=doxX
contig_1	Pyrodigal	CDS	3359791	3360576	.	-	0	ID=GCA000153685_03152;Name=DoxX family protein;locus_tag=GCA000153685_03152;product=DoxX family protein;gene=doxX;Parent=GCA000153685_03152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7A2,UniRef:UniRef100_I6YAV3,UniRef:UniRef50_A0A1S1L9L6,UniRef:UniRef90_I6YAV3
contig_1	Pyrodigal	gene	3360654	3361928	.	+	.	ID=GCA000153685_03153_gene;locus_tag=GCA000153685_03153
contig_1	Pyrodigal	CDS	3360654	3361928	.	+	0	ID=GCA000153685_03153;Name=Glucose/Sorbosone dehydrogenase domain-containing protein;locus_tag=GCA000153685_03153;product=Glucose/Sorbosone dehydrogenase domain-containing protein;Parent=GCA000153685_03153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62BFB,UniRef:UniRef100_A5U718,UniRef:UniRef50_A0A0J6Z1P1,UniRef:UniRef90_A0A7I7NTE7
contig_1	Pyrodigal	gene	3361934	3362512	.	-	.	ID=GCA000153685_03154_gene;locus_tag=GCA000153685_03154
contig_1	Pyrodigal	CDS	3361934	3362512	.	-	0	ID=GCA000153685_03154;Name=Oxidoreductase;locus_tag=GCA000153685_03154;product=Oxidoreductase;Parent=GCA000153685_03154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7A4,UniRef:UniRef100_A0A0E8XAH6,UniRef:UniRef50_A0A655FNH2,UniRef:UniRef90_A0A655FNH2
contig_1	Pyrodigal	gene	3362796	3363365	.	+	.	ID=GCA000153685_03155_gene;locus_tag=GCA000153685_03155
contig_1	Pyrodigal	CDS	3362796	3363365	.	+	0	ID=GCA000153685_03155;Name=MgtC/SapB family protein;locus_tag=GCA000153685_03155;product=MgtC/SapB family protein;Parent=GCA000153685_03155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_049956361.1,SO:0001217,UniParc:UPI00039C4C4E,UniRef:UniRef100_I6YEY1,UniRef:UniRef50_I6YEY1,UniRef:UniRef90_I6YEY1
contig_1	Pyrodigal	gene	3363362	3364891	.	-	.	ID=GCA000153685_03156_gene;locus_tag=GCA000153685_03156;gene=gatB
contig_1	Pyrodigal	CDS	3363362	3364891	.	-	0	ID=GCA000153685_03156;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;locus_tag=GCA000153685_03156;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;Dbxref=GO:0005524,GO:0005886,GO:0006412,GO:0016884,GO:0050566,GO:0050567,GO:0070681;gene=gatB;Parent=GCA000153685_03156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02434,RefSeq:WP_003415248.1,SO:0001217,UniParc:UPI000012B159,UniRef:UniRef100_P9WN61,UniRef:UniRef50_Q8NR05,UniRef:UniRef90_P9WN61;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	3364921	3365952	.	-	.	ID=GCA000153685_03157_gene;locus_tag=GCA000153685_03157;gene=pfkA
contig_1	Pyrodigal	CDS	3364921	3365952	.	-	0	ID=GCA000153685_03157;Name=ATP-dependent 6-phosphofructokinase;locus_tag=GCA000153685_03157;product=ATP-dependent 6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005886,GO:0005945,GO:0006002,GO:0009024,GO:0009274,GO:0030388,GO:0046872,GO:0047334,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000153685_03157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,RefSeq:WP_003415251.1,SO:0001217,UniParc:UPI000012DB5D,UniRef:UniRef100_P9WID7,UniRef:UniRef50_P9WID7,UniRef:UniRef90_P9WID7;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	3366048	3367532	.	-	.	ID=GCA000153685_03158_gene;locus_tag=GCA000153685_03158;gene=gatA
contig_1	Pyrodigal	CDS	3366048	3367532	.	-	0	ID=GCA000153685_03158;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;locus_tag=GCA000153685_03158;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0030956,GO:0050567;gene=gatA;Parent=GCA000153685_03158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0154,COG:J,KEGG:K02433,RefSeq:WP_003900613.1,SO:0001217,UniParc:UPI00005EE7A6,UniRef:UniRef100_P9WQA1,UniRef:UniRef50_Q47SC3,UniRef:UniRef90_P9WQA1;ec_number=6.3.5.7
contig_1	Pyrodigal	gene	3367529	3367828	.	-	.	ID=GCA000153685_03159_gene;locus_tag=GCA000153685_03159;gene=gatC
contig_1	Pyrodigal	CDS	3367529	3367828	.	-	0	ID=GCA000153685_03159;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;locus_tag=GCA000153685_03159;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0006450,GO:0009274,GO:0030956,GO:0050566,GO:0050567,GO:0070681;gene=gatC;Parent=GCA000153685_03159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415256.1,SO:0001217,UniParc:UPI000012B182,UniRef:UniRef100_P9WN59,UniRef:UniRef50_P9WN59,UniRef:UniRef90_P9WN59;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	3367904	3368569	.	+	.	ID=GCA000153685_03160_gene;locus_tag=GCA000153685_03160
contig_1	Pyrodigal	CDS	3367904	3368569	.	+	0	ID=GCA000153685_03160;Name=ACT domain-containing protein;locus_tag=GCA000153685_03160;product=ACT domain-containing protein;Parent=GCA000153685_03160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7A7,UniRef:UniRef100_A0A066S455,UniRef:UniRef50_C0ZXK5,UniRef:UniRef90_R4M1H1
contig_1	Pyrodigal	gene	3368643	3370718	.	-	.	ID=GCA000153685_03161_gene;locus_tag=GCA000153685_03161;gene=ligA
contig_1	Pyrodigal	CDS	3368643	3370718	.	-	0	ID=GCA000153685_03161;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000153685_03161;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000153685_03161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415263.1,SO:0001217,UniParc:UPI0000129686,UniRef:UniRef100_P9WNV1,UniRef:UniRef50_P9WNV1,UniRef:UniRef90_P9WNV1;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	3370749	3371762	.	-	.	ID=GCA000153685_03162_gene;locus_tag=GCA000153685_03162;gene=metE
contig_1	Pyrodigal	CDS	3370749	3371762	.	-	0	ID=GCA000153685_03162;Name=Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein;locus_tag=GCA000153685_03162;product=Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein;gene=metE;Parent=GCA000153685_03162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415268.1,SO:0001217,UniParc:UPI00000D5F53,UniRef:UniRef100_I6YAW3,UniRef:UniRef50_A0A375Z4J1,UniRef:UniRef90_I6YAW3
contig_1	Pyrodigal	gene	3371856	3372485	.	+	.	ID=GCA000153685_03163_gene;locus_tag=GCA000153685_03163;gene=lpqA
contig_1	Pyrodigal	CDS	3371856	3372485	.	+	0	ID=GCA000153685_03163;Name=Lipoprotein LpqA;locus_tag=GCA000153685_03163;product=Lipoprotein LpqA;gene=lpqA;Parent=GCA000153685_03163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415270.1,SO:0001217,UniParc:UPI00000D1164,UniRef:UniRef100_A5U728,UniRef:UniRef50_A0A1A3SWZ5,UniRef:UniRef90_A5U728
contig_1	Pyrodigal	gene	3372588	3372938	.	-	.	ID=GCA000153685_03164_gene;locus_tag=GCA000153685_03164;gene=esxQ
contig_1	Pyrodigal	CDS	3372588	3372938	.	-	0	ID=GCA000153685_03164;Name=type VII secretion system ESX-3 effector EsxQ;locus_tag=GCA000153685_03164;product=type VII secretion system ESX-3 effector EsxQ;Dbxref=GO:0005576;gene=esxQ;Parent=GCA000153685_03164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415272,RefSeq:WP_014584882.1,SO:0001217,UniParc:UPI0000F517F2,UniRef:UniRef100_P9WNJ1,UniRef:UniRef50_P9WNJ1,UniRef:UniRef90_P9WNJ1
contig_1	Pyrodigal	gene	3373037	3374341	.	-	.	ID=GCA000153685_03165_gene;locus_tag=GCA000153685_03165;gene=pPE46
contig_1	Pyrodigal	CDS	3373037	3374341	.	-	0	ID=GCA000153685_03165;Name=putative PPE family protein PPE46;locus_tag=GCA000153685_03165;product=putative PPE family protein PPE46;Dbxref=GO:0051701,GO:0052572;gene=pPE46;Parent=GCA000153685_03165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003910691.1,SO:0001217,UniParc:UPI0000036B8C,UniRef:UniRef100_P9WHY9,UniRef:UniRef50_P9WHY9,UniRef:UniRef90_P9WHY9
contig_1	Pyrodigal	gene	3374338	3374655	.	-	.	ID=GCA000153685_03166_gene;locus_tag=GCA000153685_03166
contig_1	Pyrodigal	CDS	3374338	3374655	.	-	0	ID=GCA000153685_03166;Name=PE family protein PE29;locus_tag=GCA000153685_03166;product=PE family protein PE29;Parent=GCA000153685_03166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000529C6F,UniRef:UniRef100_A0A0H3LDA9,UniRef:UniRef50_Q6MX17,UniRef:UniRef90_Q6MX17
contig_1	Pyrodigal	gene	3375034	3376281	.	-	.	ID=GCA000153685_03167_gene;locus_tag=GCA000153685_03167;gene=tnp
contig_1	Pyrodigal	CDS	3375034	3376281	.	-	0	ID=GCA000153685_03167;Name=IS256 family IS1081 transposase;locus_tag=GCA000153685_03167;product=IS256 family IS1081 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000153685_03167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1081,RefSeq:WP_003900260.1,SO:0001217,UniParc:UPI00000D2D3E,UniRef:UniRef100_Q8VIQ5,UniRef:UniRef50_P60230,UniRef:UniRef90_P60230
contig_1	Pyrodigal	gene	3376444	3377547	.	-	.	ID=GCA000153685_03168_gene;locus_tag=GCA000153685_03168;gene=mnmA
contig_1	Pyrodigal	CDS	3376444	3377547	.	-	0	ID=GCA000153685_03168;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000153685_03168;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0005524,GO:0005737,GO:0008033,GO:0016740,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000153685_03168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00566,RefSeq:WP_003415909.1,SO:0001217,UniParc:UPI0000032358,UniRef:UniRef100_P9WJS5,UniRef:UniRef50_B1VFZ9,UniRef:UniRef90_P9WJS5;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	3377544	3378725	.	-	.	ID=GCA000153685_03169_gene;locus_tag=GCA000153685_03169;gene=iscS
contig_1	Pyrodigal	CDS	3377544	3378725	.	-	0	ID=GCA000153685_03169;Name=IscS-like cysteine desulfurase;locus_tag=GCA000153685_03169;product=IscS-like cysteine desulfurase;Dbxref=GO:0008483,GO:0016226,GO:0031071,GO:0046872,GO:0051536;gene=iscS;Parent=GCA000153685_03169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04487,RefSeq:WP_003415911.1,SO:0001217,UniParc:UPI00000D6007,UniRef:UniRef100_P9WQ71,UniRef:UniRef50_P9WQ71,UniRef:UniRef90_P9WQ71;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	3378822	3379736	.	-	.	ID=GCA000153685_03170_gene;locus_tag=GCA000153685_03170
contig_1	Pyrodigal	CDS	3378822	3379736	.	-	0	ID=GCA000153685_03170;Name=Phospholipid/glycerol acyltransferase domain-containing protein;locus_tag=GCA000153685_03170;product=Phospholipid/glycerol acyltransferase domain-containing protein;Parent=GCA000153685_03170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415914.1,SO:0001217,UniParc:UPI00000D5EDA,UniRef:UniRef100_I6XFY8,UniRef:UniRef50_I6XFY8,UniRef:UniRef90_I6XFY8
contig_1	Pyrodigal	gene	3379733	3380578	.	-	.	ID=GCA000153685_03171_gene;locus_tag=GCA000153685_03171
contig_1	Pyrodigal	CDS	3379733	3380578	.	-	0	ID=GCA000153685_03171;Name=GCN5-related N-acetyltransferase;locus_tag=GCA000153685_03171;product=GCN5-related N-acetyltransferase;Parent=GCA000153685_03171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22310,RefSeq:WP_003900617.1,SO:0001217,UniParc:UPI00000CCB62,UniRef:UniRef100_I6YEZ8,UniRef:UniRef50_B2HIE2,UniRef:UniRef90_I6YEZ8;ec_number=2.3.2.30
contig_1	Pyrodigal	gene	3380734	3381690	.	-	.	ID=GCA000153685_03172_gene;locus_tag=GCA000153685_03172;gene=etfA
contig_1	Pyrodigal	CDS	3380734	3381690	.	-	0	ID=GCA000153685_03172;Name=Electron transfer flavoprotein subunit alpha;locus_tag=GCA000153685_03172;product=Electron transfer flavoprotein subunit alpha;Dbxref=GO:0005829,GO:0005886,GO:0009055,GO:0009274,GO:0033539,GO:0050660;gene=etfA;Parent=GCA000153685_03172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2025,RefSeq:WP_003899889.1,SO:0001217,UniParc:UPI000003326D,UniRef:UniRef100_P9WNG9,UniRef:UniRef50_P9WNG9,UniRef:UniRef90_P9WNG9
contig_1	Pyrodigal	gene	3381729	3382529	.	-	.	ID=GCA000153685_03173_gene;locus_tag=GCA000153685_03173;gene=etfB
contig_1	Pyrodigal	CDS	3381729	3382529	.	-	0	ID=GCA000153685_03173;Name=Electron transfer flavoprotein subunit beta;locus_tag=GCA000153685_03173;product=Electron transfer flavoprotein subunit beta;Dbxref=GO:0005829,GO:0005886,GO:0009055,GO:0009274;gene=etfB;Parent=GCA000153685_03173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2086,KEGG:K03521,RefSeq:WP_003415921.1,SO:0001217,UniParc:UPI000004A4BE,UniRef:UniRef100_P9WNG7,UniRef:UniRef50_P9WNG7,UniRef:UniRef90_P9WNG7
contig_1	Pyrodigal	gene	3382760	3383584	.	+	.	ID=GCA000153685_03174_gene;locus_tag=GCA000153685_03174
contig_1	Pyrodigal	CDS	3382760	3383584	.	+	0	ID=GCA000153685_03174;Name=putative S-adenosylmethionine-dependent methyltransferase Rv3030;locus_tag=GCA000153685_03174;product=putative S-adenosylmethionine-dependent methyltransferase Rv3030;Dbxref=GO:0005829,GO:0005886,GO:0008168,GO:0008757,GO:0032259;Parent=GCA000153685_03174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415922.1,SO:0001217,UniParc:UPI00000D6026,UniRef:UniRef100_P9WJZ1,UniRef:UniRef50_A0QUV5,UniRef:UniRef90_P9WJZ1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3383602	3385161	.	+	.	ID=GCA000153685_03175_gene;locus_tag=GCA000153685_03175
contig_1	Pyrodigal	CDS	3383602	3385161	.	+	0	ID=GCA000153685_03175;Name=1%2C4-alpha-glucan branching protein;locus_tag=GCA000153685_03175;product=1%2C4-alpha-glucan branching protein;Parent=GCA000153685_03175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16149,SO:0001217,UniRef:UniRef50_P9WQ27,UniRef:UniRef90_A0A9P2M5X5;ec_number=2.4.1.18
contig_1	Pyrodigal	gene	3385205	3386437	.	+	.	ID=GCA000153685_03176_gene;locus_tag=GCA000153685_03176
contig_1	Pyrodigal	CDS	3385205	3386437	.	+	0	ID=GCA000153685_03176;Name=glycogen synthase;locus_tag=GCA000153685_03176;product=glycogen synthase;Dbxref=GO:0004373,GO:0005978,GO:0009103,GO:0016757;Parent=GCA000153685_03176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415928,SO:0001217,UniParc:UPI0001E61D4C,UniRef:UniRef100_P9WMY9,UniRef:UniRef50_P9WMY9,UniRef:UniRef90_P9WMY9;ec_number=2.4.1.11
contig_1	Pyrodigal	gene	3386471	3386860	.	+	.	ID=GCA000153685_03177_gene;locus_tag=GCA000153685_03177
contig_1	Pyrodigal	CDS	3386471	3386860	.	+	0	ID=GCA000153685_03177;Name=Conserved protein;locus_tag=GCA000153685_03177;product=Conserved protein;Parent=GCA000153685_03177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415930.1,SO:0001217,UniParc:UPI00000D2D3F,UniRef:UniRef100_I6X630,UniRef:UniRef50_A0A1A3Q3B4,UniRef:UniRef90_I6X630
contig_1	Pyrodigal	gene	3387039	3387587	.	+	.	ID=GCA000153685_03178_gene;locus_tag=GCA000153685_03178
contig_1	Pyrodigal	CDS	3387039	3387587	.	+	0	ID=GCA000153685_03178;Name=DUF4333 domain-containing protein;locus_tag=GCA000153685_03178;product=DUF4333 domain-containing protein;Parent=GCA000153685_03178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415932.1,SO:0001217,UniParc:UPI00000D1187,UniRef:UniRef100_I6YAY5,UniRef:UniRef50_I6YAY5,UniRef:UniRef90_I6YAY5
contig_1	Pyrodigal	gene	3387678	3388580	.	-	.	ID=GCA000153685_03179_gene;locus_tag=GCA000153685_03179
contig_1	Pyrodigal	CDS	3387678	3388580	.	-	0	ID=GCA000153685_03179;Name=putative acetyltransferase Rv3034c;locus_tag=GCA000153685_03179;product=putative acetyltransferase Rv3034c;Dbxref=GO:0005886,GO:0009274,GO:0016746;Parent=GCA000153685_03179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902399.1,SO:0001217,UniParc:UPI00000D4F88,UniRef:UniRef100_O53281,UniRef:UniRef50_O53281,UniRef:UniRef90_O53281;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	3389113	3390120	.	+	.	ID=GCA000153685_03180_gene;locus_tag=GCA000153685_03180
contig_1	Pyrodigal	CDS	3389113	3390120	.	+	0	ID=GCA000153685_03180;Name=Protein Rv3035;locus_tag=GCA000153685_03180;product=Protein Rv3035;Parent=GCA000153685_03180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7B0,UniRef:UniRef100_A0A0H3LKH2,UniRef:UniRef50_I6XFZ8,UniRef:UniRef90_I6XFZ8
contig_1	Pyrodigal	gene	3390117	3390800	.	-	.	ID=GCA000153685_03181_gene;locus_tag=GCA000153685_03181;gene=tB22.2
contig_1	Pyrodigal	CDS	3390117	3390800	.	-	0	ID=GCA000153685_03181;Name=esterase;locus_tag=GCA000153685_03181;product=esterase;Dbxref=GO:0005576,GO:0005886,GO:0006629,GO:0008126;gene=tB22.2;Parent=GCA000153685_03181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415939.1,SO:0001217,UniParc:UPI00000D5E2E,UniRef:UniRef100_I6YF08,UniRef:UniRef50_I6YF08,UniRef:UniRef90_I6YF08;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3390873	3391949	.	-	.	ID=GCA000153685_03182_gene;locus_tag=GCA000153685_03182
contig_1	Pyrodigal	CDS	3390873	3391949	.	-	0	ID=GCA000153685_03182;Name=putative S-adenosylmethionine-dependent methyltransferase Rv3037c;locus_tag=GCA000153685_03182;product=putative S-adenosylmethionine-dependent methyltransferase Rv3037c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_03182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00012781B6,UniRef:UniRef100_A0A0H3LDH3,UniRef:UniRef50_P9WJZ3,UniRef:UniRef90_P9WJZ3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3392084	3393139	.	-	.	ID=GCA000153685_03183_gene;locus_tag=GCA000153685_03183
contig_1	Pyrodigal	CDS	3392084	3393139	.	-	0	ID=GCA000153685_03183;Name=Methyltransferase;locus_tag=GCA000153685_03183;product=Methyltransferase;Parent=GCA000153685_03183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E29238,UniRef:UniRef100_I6YAZ1,UniRef:UniRef50_A0A0J6Z8Q1,UniRef:UniRef90_A0A0T9G5J5
contig_1	Pyrodigal	gene	3393078	3393863	.	-	.	ID=GCA000153685_03184_gene;locus_tag=GCA000153685_03184;gene=echA17
contig_1	Pyrodigal	CDS	3393078	3393863	.	-	0	ID=GCA000153685_03184;Name=enoyl-CoA hydratase;locus_tag=GCA000153685_03184;product=enoyl-CoA hydratase;Dbxref=GO:0004300,GO:0005886,GO:0006635;gene=echA17;Parent=GCA000153685_03184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7B2,UniRef:UniRef100_P9WNN3,UniRef:UniRef50_P9WNN3,UniRef:UniRef90_P9WNN3;ec_number=4.2.1.17
contig_1	Pyrodigal	gene	3393851	3394717	.	-	.	ID=GCA000153685_03185_gene;locus_tag=GCA000153685_03185
contig_1	Pyrodigal	CDS	3393851	3394717	.	-	0	ID=GCA000153685_03185;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000153685_03185;product=Nudix hydrolase domain-containing protein;Parent=GCA000153685_03185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415943.1,SO:0001217,UniParc:UPI00000C1534,UniRef:UniRef100_O53287,UniRef:UniRef50_B2HHH9,UniRef:UniRef90_R4MHV7
contig_1	Pyrodigal	gene	3394714	3395577	.	-	.	ID=GCA000153685_03186_gene;locus_tag=GCA000153685_03186
contig_1	Pyrodigal	CDS	3394714	3395577	.	-	0	ID=GCA000153685_03186;Name=ABC transporter ATP-binding protein;locus_tag=GCA000153685_03186;product=ABC transporter ATP-binding protein;Parent=GCA000153685_03186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415944.1,SO:0001217,UniParc:UPI00000D5F9B,UniRef:UniRef100_A5U755,UniRef:UniRef50_E5XNM5,UniRef:UniRef90_R4M9X9
contig_1	Pyrodigal	gene	3395592	3396821	.	-	.	ID=GCA000153685_03187_gene;locus_tag=GCA000153685_03187;gene=serB
contig_1	Pyrodigal	CDS	3395592	3396821	.	-	0	ID=GCA000153685_03187;Name=phosphoserine phosphatase SerB;locus_tag=GCA000153685_03187;product=phosphoserine phosphatase SerB;Dbxref=GO:0006564,GO:0036424;gene=serB;Parent=GCA000153685_03187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01079,RefSeq:WP_003415945.1,SO:0001217,UniParc:UPI000016516E,UniRef:UniRef100_A0A0H3LDH7,UniRef:UniRef50_O53289,UniRef:UniRef90_A0A0H3LDH7;ec_number=3.1.3.3
contig_1	Pyrodigal	gene	3396859	3398580	.	-	.	ID=GCA000153685_03188_gene;locus_tag=GCA000153685_03188;gene=ctaD
contig_1	Pyrodigal	CDS	3396859	3398580	.	-	0	ID=GCA000153685_03188;Name=cytochrome c oxidase subunit I;locus_tag=GCA000153685_03188;product=cytochrome c oxidase subunit I;Dbxref=GO:0004129,GO:0005886,GO:0006119,GO:0009060,GO:0015990,GO:0020037,GO:0022904,GO:0046872;gene=ctaD;Parent=GCA000153685_03188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0843,RefSeq:WP_003415946.1,SO:0001217,UniParc:UPI0000127F8A,UniRef:UniRef100_P9WP71,UniRef:UniRef50_Q79VD7,UniRef:UniRef90_Q9CBQ5;ec_number=7.1.1.9
contig_1	Pyrodigal	gene	3398891	3399874	.	+	.	ID=GCA000153685_03189_gene;locus_tag=GCA000153685_03189
contig_1	Pyrodigal	CDS	3398891	3399874	.	+	0	ID=GCA000153685_03189;Name=Iron ABC transporter substrate-binding protein;locus_tag=GCA000153685_03189;product=Iron ABC transporter substrate-binding protein;Parent=GCA000153685_03189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016516F,UniRef:UniRef100_A0A0H3LKI2,UniRef:UniRef50_A0A051U5X8,UniRef:UniRef90_A5U758
contig_1	Pyrodigal	gene	3399944	3400984	.	+	.	ID=GCA000153685_03190_gene;locus_tag=GCA000153685_03190;gene=adhC
contig_1	Pyrodigal	CDS	3399944	3400984	.	+	0	ID=GCA000153685_03190;Name=NADP-dependent alcohol dehydrogenase C;locus_tag=GCA000153685_03190;product=NADP-dependent alcohol dehydrogenase C;Dbxref=GO:0005829,GO:0005886,GO:0008106,GO:0008270,GO:0009274,GO:0016616;gene=adhC;Parent=GCA000153685_03190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415965.1,SO:0001217,UniParc:UPI00001255E0,UniRef:UniRef100_P9WQC5,UniRef:UniRef50_P9WQC5,UniRef:UniRef90_P9WQC5;ec_number=1.1.1.2
contig_1	Pyrodigal	gene	3400973	3401347	.	-	.	ID=GCA000153685_03191_gene;locus_tag=GCA000153685_03191
contig_1	Pyrodigal	CDS	3400973	3401347	.	-	0	ID=GCA000153685_03191;Name=Conserved protein;locus_tag=GCA000153685_03191;product=Conserved protein;Parent=GCA000153685_03191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415968.1,SO:0001217,UniParc:UPI00000D10DD,UniRef:UniRef100_I6YF16,UniRef:UniRef50_A0A375Z4F3,UniRef:UniRef90_I6YF16
contig_1	Pyrodigal	gene	3401681	3401965	.	-	.	ID=GCA000153685_03192_gene;locus_tag=GCA000153685_03192
contig_1	Pyrodigal	CDS	3401681	3401965	.	-	0	ID=GCA000153685_03192;Name=hypothetical protein;locus_tag=GCA000153685_03192;product=hypothetical protein;Parent=GCA000153685_03192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899894.1,SO:0001217,UniParc:UPI00000D0FEC,UniRef:UniRef100_I6X642,UniRef:UniRef50_I6X642,UniRef:UniRef90_I6X642
contig_1	Pyrodigal	gene	3402063	3403037	.	-	.	ID=GCA000153685_03193_gene;locus_tag=GCA000153685_03193;gene=nrdF
contig_1	Pyrodigal	CDS	3402063	3403037	.	-	0	ID=GCA000153685_03193;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000153685_03193;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009263,GO:0046872;gene=nrdF;Parent=GCA000153685_03193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_003415973.1,SO:0001217,UniParc:UPI00000D5E85,UniRef:UniRef100_P9WH71,UniRef:UniRef50_P9WH71,UniRef:UniRef90_P9WH71;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	3403168	3404742	.	-	.	ID=GCA000153685_03194_gene;locus_tag=GCA000153685_03194
contig_1	Pyrodigal	CDS	3403168	3404742	.	-	0	ID=GCA000153685_03194;Name=Monooxygenase;locus_tag=GCA000153685_03194;product=Monooxygenase;Parent=GCA000153685_03194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899895.1,SO:0001217,UniParc:UPI00000D1124,UniRef:UniRef100_A5U763,UniRef:UniRef50_A0A378SIR0,UniRef:UniRef90_A5U763
contig_1	Pyrodigal	gene	3404876	3405616	.	-	.	ID=GCA000153685_03195_gene;locus_tag=GCA000153685_03195
contig_1	Pyrodigal	CDS	3404876	3405616	.	-	0	ID=GCA000153685_03195;Name=AsnC-family transcriptional regulator;locus_tag=GCA000153685_03195;product=AsnC-family transcriptional regulator;Parent=GCA000153685_03195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415979.1,SO:0001217,UniParc:UPI00000D5E71,UniRef:UniRef100_A5U764,UniRef:UniRef50_A0A1X2C002,UniRef:UniRef90_A5U764
contig_1	Pyrodigal	gene	3405744	3407921	.	-	.	ID=GCA000153685_03196_gene;locus_tag=GCA000153685_03196;gene=nrdE
contig_1	Pyrodigal	CDS	3405744	3407921	.	-	0	ID=GCA000153685_03196;Name=class 1b ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000153685_03196;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0005886,GO:0005971,GO:0006260,GO:0009263,GO:0051063;gene=nrdE;Parent=GCA000153685_03196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_003914457.1,SO:0001217,UniParc:UPI0000133968,UniRef:UniRef100_P9WH75,UniRef:UniRef50_P9WH75,UniRef:UniRef90_P9WH75;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	3407891	3408343	.	-	.	ID=GCA000153685_03197_gene;locus_tag=GCA000153685_03197;gene=nrdI
contig_1	Pyrodigal	CDS	3407891	3408343	.	-	0	ID=GCA000153685_03197;Name=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;locus_tag=GCA000153685_03197;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;Dbxref=GO:0009263,GO:0010181,GO:0036211;gene=nrdI;Parent=GCA000153685_03197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03647,RefSeq:WP_003415981.1,SO:0001217,UniParc:UPI00001304E1,UniRef:UniRef100_P9WIZ3,UniRef:UniRef50_P9WIZ3,UniRef:UniRef90_P9WIZ3
contig_1	Pyrodigal	gene	3408378	3408617	.	-	.	ID=GCA000153685_03198_gene;locus_tag=GCA000153685_03198;gene=nrdH
contig_1	Pyrodigal	CDS	3408378	3408617	.	-	0	ID=GCA000153685_03198;Name=redoxin NrdH;locus_tag=GCA000153685_03198;product=redoxin NrdH;gene=nrdH;Parent=GCA000153685_03198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415982,RefSeq:WP_003415982.1,SO:0001217,UniParc:UPI00000D5E65,UniRef:UniRef100_I6YB06,UniRef:UniRef50_A0A4P6E9P0,UniRef:UniRef90_I6YB06
contig_1	Pyrodigal	gene	3409080	3409634	.	-	.	ID=GCA000153685_03199_gene;locus_tag=GCA000153685_03199
contig_1	Pyrodigal	CDS	3409080	3409634	.	-	0	ID=GCA000153685_03199;Name=NADPH-dependent FMN reductase-like domain-containing protein;locus_tag=GCA000153685_03199;product=NADPH-dependent FMN reductase-like domain-containing protein;Parent=GCA000153685_03199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19784,RefSeq:WP_003415983.1,SO:0001217,UniParc:UPI000011D959,UniRef:UniRef100_P95105,UniRef:UniRef50_P95105,UniRef:UniRef90_P95105
contig_1	Pyrodigal	gene	3409726	3410340	.	+	.	ID=GCA000153685_03200_gene;locus_tag=GCA000153685_03200
contig_1	Pyrodigal	CDS	3409726	3410340	.	+	0	ID=GCA000153685_03200;Name=putative transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_03200;product=putative transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_03200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415984.1,SO:0001217,UniParc:UPI0000165330,UniRef:UniRef100_P95103,UniRef:UniRef50_P95103,UniRef:UniRef90_P95103
contig_1	Pyrodigal	gene	3410350	3411390	.	+	.	ID=GCA000153685_03201_gene;locus_tag=GCA000153685_03201;gene=dinB2
contig_1	Pyrodigal	CDS	3410350	3411390	.	+	0	ID=GCA000153685_03201;Name=DNA polymerase IV;locus_tag=GCA000153685_03201;product=DNA polymerase IV;Dbxref=GO:0000287,GO:0003684,GO:0003887,GO:0005829,GO:0005886,GO:0006261,GO:0006281,GO:0009432,GO:0042276;gene=dinB2;Parent=GCA000153685_03201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899898.1,SO:0001217,UniParc:UPI000012972D,UniRef:UniRef100_P9WNT1,UniRef:UniRef50_P9WNT1,UniRef:UniRef90_P9WNT1;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3411444	3412307	.	-	.	ID=GCA000153685_03202_gene;locus_tag=GCA000153685_03202
contig_1	Pyrodigal	CDS	3411444	3412307	.	-	0	ID=GCA000153685_03202;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03202;product=SDR family oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_03202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900621.1,SO:0001217,UniParc:UPI00012781DE,UniRef:UniRef100_A0A0H3LER0,UniRef:UniRef50_A0A081I719,UniRef:UniRef90_A0A655IJ12
contig_1	Pyrodigal	gene	3412371	3413021	.	-	.	ID=GCA000153685_03203_gene;locus_tag=GCA000153685_03203
contig_1	Pyrodigal	CDS	3412371	3413021	.	-	0	ID=GCA000153685_03203;Name=putative transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_03203;product=putative transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_03203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21961,RefSeq:WP_003415987.1,SO:0001217,UniParc:UPI0000165331,UniRef:UniRef100_P95100,UniRef:UniRef50_P95100,UniRef:UniRef90_P95100
contig_1	Pyrodigal	gene	3413137	3414615	.	+	.	ID=GCA000153685_03204_gene;locus_tag=GCA000153685_03204;gene=cyp136
contig_1	Pyrodigal	CDS	3413137	3414615	.	+	0	ID=GCA000153685_03204;Name=Putative cytochrome P450 136;locus_tag=GCA000153685_03204;product=Putative cytochrome P450 136;Dbxref=GO:0004497,GO:0005506,GO:0016491,GO:0016705,GO:0020037;gene=cyp136;Parent=GCA000153685_03204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899900.1,SO:0001217,UniParc:UPI0000126BB4,UniRef:UniRef100_P9WPM7,UniRef:UniRef50_P9WPM7,UniRef:UniRef90_P9WPM7;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	3415386	3416858	.	-	.	ID=GCA000153685_03205_gene;locus_tag=GCA000153685_03205;gene=gntR
contig_1	Pyrodigal	CDS	3415386	3416858	.	-	0	ID=GCA000153685_03205;Name=GntR family transcriptional regulator;locus_tag=GCA000153685_03205;product=GntR family transcriptional regulator;gene=gntR;Parent=GCA000153685_03205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415989.1,SO:0001217,UniParc:UPI00000C1575,UniRef:UniRef100_Q8VJ78,UniRef:UniRef50_Q73VA2,UniRef:UniRef90_R4MAW4
contig_1	Pyrodigal	gene	3416975	3419140	.	-	.	ID=GCA000153685_03206_gene;locus_tag=GCA000153685_03206
contig_1	Pyrodigal	CDS	3416975	3419140	.	-	0	ID=GCA000153685_03206;Name=putative acyl-CoA dehydrogenase fadE22;locus_tag=GCA000153685_03206;product=putative acyl-CoA dehydrogenase fadE22;Parent=GCA000153685_03206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902404.1,SO:0001217,UniParc:UPI00000D600B,UniRef:UniRef100_A5U775,UniRef:UniRef50_Q0RLX4,UniRef:UniRef90_A0A0H3MDW5
contig_1	Pyrodigal	gene	3419327	3420820	.	+	.	ID=GCA000153685_03207_gene;locus_tag=GCA000153685_03207;gene=ligB
contig_1	Pyrodigal	CDS	3419327	3420820	.	+	0	ID=GCA000153685_03207;Name=ATP-dependent DNA ligase;locus_tag=GCA000153685_03207;product=ATP-dependent DNA ligase;Dbxref=GO:0000287,GO:0003677,GO:0003910,GO:0005524,GO:0006260,GO:0006266,GO:0006281,GO:0006310,GO:0009274,GO:0051301,GO:0071897;gene=ligB;Parent=GCA000153685_03207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00022F3205,UniRef:UniRef100_P9WNV4,UniRef:UniRef50_P9WNV5,UniRef:UniRef90_P9WNV5;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	3420956	3423232	.	+	.	ID=GCA000153685_03208_gene;locus_tag=GCA000153685_03208;gene=cstA
contig_1	Pyrodigal	CDS	3420956	3423232	.	+	0	ID=GCA000153685_03208;Name=Peptide transporter CstA;locus_tag=GCA000153685_03208;product=Peptide transporter CstA;Dbxref=GO:0005886,GO:0009267,GO:0015031,GO:0015833,GO:0031669;gene=cstA;Parent=GCA000153685_03208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06200,RefSeq:WP_003899901.1,SO:0001217,UniParc:UPI0000165171,UniRef:UniRef100_P9WP46,UniRef:UniRef50_P9WP47,UniRef:UniRef90_P9WP47
contig_1	Pyrodigal	gene	3423538	3423963	.	-	.	ID=GCA000153685_03209_gene;locus_tag=GCA000153685_03209;gene=doxX
contig_1	Pyrodigal	CDS	3423538	3423963	.	-	0	ID=GCA000153685_03209;Name=DoxX family protein;locus_tag=GCA000153685_03209;product=DoxX family protein;gene=doxX;Parent=GCA000153685_03209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003415994.1,SO:0001217,UniParc:UPI00000D10FD,UniRef:UniRef100_A5U779,UniRef:UniRef50_J9WFS5,UniRef:UniRef90_R4MAX0
contig_1	Pyrodigal	gene	3424100	3424423	.	+	.	ID=GCA000153685_03210_gene;locus_tag=GCA000153685_03210;gene=mmr
contig_1	Pyrodigal	CDS	3424100	3424423	.	+	0	ID=GCA000153685_03210;Name=multidrug efflux SMR transporter Mmr;locus_tag=GCA000153685_03210;product=multidrug efflux SMR transporter Mmr;Dbxref=GO:0005886,GO:0015562,GO:0022857,GO:0046677,GO:0055085;gene=mmr;Parent=GCA000153685_03210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003415995,KEGG:K03297,RefSeq:WP_003415995.1,SO:0001217,UniParc:UPI000013C179,UniRef:UniRef100_P9WGF1,UniRef:UniRef50_P9WGF1,UniRef:UniRef90_P9WGF1
contig_1	Pyrodigal	gene	3424495	3425028	.	+	.	ID=GCA000153685_03211_gene;locus_tag=GCA000153685_03211
contig_1	Pyrodigal	CDS	3424495	3425028	.	+	0	ID=GCA000153685_03211;Name=Deor-family transcriptional regulator;locus_tag=GCA000153685_03211;product=Deor-family transcriptional regulator;Parent=GCA000153685_03211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23778,SO:0001217,UniParc:UPI0002E00631,UniRef:UniRef100_A0A0E7ZX35,UniRef:UniRef50_L0ISK1,UniRef:UniRef90_A5U781
contig_1	Pyrodigal	gene	3425006	3425551	.	+	.	ID=GCA000153685_03212_gene;locus_tag=GCA000153685_03212
contig_1	Pyrodigal	CDS	3425006	3425551	.	+	0	ID=GCA000153685_03212;Name=putative protein Rv3067;locus_tag=GCA000153685_03212;product=putative protein Rv3067;Dbxref=GO:0005886;Parent=GCA000153685_03212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917120.1,SO:0001217,UniParc:UPI00005EE7BA,UniRef:UniRef100_I6YB21,UniRef:UniRef50_I6YB21,UniRef:UniRef90_I6YB21
contig_1	tRNAscan-SE	gene	3425553	3425625	.	-	.	ID=GCA000153685_03213_gene;locus_tag=GCA000153685_03213;gene=trnA
contig_1	tRNAscan-SE	tRNA	3425553	3425625	.	-	.	ID=GCA000153685_03213;Name=tRNA-Ala(ggc);locus_tag=GCA000153685_03213;product=tRNA-Ala(ggc);gene=trnA;anti_codon=ggc;amino_acid=Ala;Parent=GCA000153685_03213_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Pyrodigal	gene	3425692	3427335	.	-	.	ID=GCA000153685_03214_gene;locus_tag=GCA000153685_03214;gene=pgm
contig_1	Pyrodigal	CDS	3425692	3427335	.	-	0	ID=GCA000153685_03214;Name=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);locus_tag=GCA000153685_03214;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);Dbxref=GO:0004614,GO:0005975;gene=pgm;Parent=GCA000153685_03214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899902.1,SO:0001217,UniParc:UPI00000D5E3D,UniRef:UniRef100_A5U783,UniRef:UniRef50_A0A942SZC2,UniRef:UniRef90_R4M9P7;ec_number=5.4.2.2
contig_1	Pyrodigal	gene	3427405	3427803	.	+	.	ID=GCA000153685_03215_gene;locus_tag=GCA000153685_03215;gene=crcB
contig_1	Pyrodigal	CDS	3427405	3427803	.	+	0	ID=GCA000153685_03215;Name=fluoride efflux transporter CrcB;locus_tag=GCA000153685_03215;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=crcB;Parent=GCA000153685_03215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416045.1,SO:0001217,UniParc:UPI00001283B8,UniRef:UniRef100_P9WP63,UniRef:UniRef50_P9WP63,UniRef:UniRef90_P9WP63
contig_1	Pyrodigal	gene	3427800	3428180	.	+	.	ID=GCA000153685_03216_gene;locus_tag=GCA000153685_03216;gene=crcB
contig_1	Pyrodigal	CDS	3427800	3428180	.	+	0	ID=GCA000153685_03216;Name=fluoride efflux transporter CrcB;locus_tag=GCA000153685_03216;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114,GO:1903424,GO:1903425;gene=crcB;Parent=GCA000153685_03216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416046.1,SO:0001217,UniParc:UPI00001283C4,UniRef:UniRef100_P9WP61,UniRef:UniRef50_P9WP61,UniRef:UniRef90_P9WP61
contig_1	Pyrodigal	gene	3428177	3429286	.	+	.	ID=GCA000153685_03217_gene;locus_tag=GCA000153685_03217
contig_1	Pyrodigal	CDS	3428177	3429286	.	+	0	ID=GCA000153685_03217;Name=DUF190 domain-containing protein;locus_tag=GCA000153685_03217;product=DUF190 domain-containing protein;Parent=GCA000153685_03217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09137,RefSeq:WP_003901532.1,SO:0001217,UniParc:UPI0000165332,UniRef:UniRef100_P95087,UniRef:UniRef50_P95087,UniRef:UniRef90_P95087
contig_1	Pyrodigal	gene	3429511	3430008	.	-	.	ID=GCA000153685_03218_gene;locus_tag=GCA000153685_03218
contig_1	Pyrodigal	CDS	3429511	3430008	.	-	0	ID=GCA000153685_03218;Name=Luciferase-like domain-containing protein;locus_tag=GCA000153685_03218;product=Luciferase-like domain-containing protein;Parent=GCA000153685_03218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A5DB,UniRef:UniRef100_A0A0H3LKM5,UniRef:UniRef50_P95086,UniRef:UniRef90_P95086
contig_1	Pyrodigal	gene	3430042	3430398	.	-	.	ID=GCA000153685_03219_gene;locus_tag=GCA000153685_03219
contig_1	Pyrodigal	CDS	3430042	3430398	.	-	0	ID=GCA000153685_03219;Name=putative protein Rv3073c;locus_tag=GCA000153685_03219;product=putative protein Rv3073c;Parent=GCA000153685_03219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416050.1,SO:0001217,UniParc:UPI000013C17D,UniRef:UniRef100_P9WL11,UniRef:UniRef50_P9WL11,UniRef:UniRef90_P9WL11
contig_1	Pyrodigal	gene	3430468	3431766	.	+	.	ID=GCA000153685_03220_gene;locus_tag=GCA000153685_03220
contig_1	Pyrodigal	CDS	3430468	3431766	.	+	0	ID=GCA000153685_03220;Name=HNH nuclease domain-containing protein;locus_tag=GCA000153685_03220;product=HNH nuclease domain-containing protein;Parent=GCA000153685_03220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A498QMZ6,UniRef:UniRef90_I6XG38
contig_1	Pyrodigal	gene	3431763	3432686	.	-	.	ID=GCA000153685_03221_gene;locus_tag=GCA000153685_03221
contig_1	Pyrodigal	CDS	3431763	3432686	.	-	0	ID=GCA000153685_03221;Name=HpcH/HpaI aldolase/citrate lyase domain-containing protein;locus_tag=GCA000153685_03221;product=HpcH/HpaI aldolase/citrate lyase domain-containing protein;Parent=GCA000153685_03221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416052.1,SO:0001217,UniParc:UPI00000D6042,UniRef:UniRef100_I6YF40,UniRef:UniRef50_A0A1A3AUX7,UniRef:UniRef90_R4MHY9
contig_1	Pyrodigal	gene	3432785	3433261	.	+	.	ID=GCA000153685_03222_gene;locus_tag=GCA000153685_03222
contig_1	Pyrodigal	CDS	3432785	3433261	.	+	0	ID=GCA000153685_03222;Name=Cyclase;locus_tag=GCA000153685_03222;product=Cyclase;Parent=GCA000153685_03222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416053.1,SO:0001217,UniParc:UPI00000D1086,UniRef:UniRef100_I6X666,UniRef:UniRef50_I6X666,UniRef:UniRef90_I6X666
contig_1	Pyrodigal	gene	3433254	3435065	.	+	.	ID=GCA000153685_03223_gene;locus_tag=GCA000153685_03223
contig_1	Pyrodigal	CDS	3433254	3435065	.	+	0	ID=GCA000153685_03223;Name=Hydrolase;locus_tag=GCA000153685_03223;product=Hydrolase;Parent=GCA000153685_03223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899904.1,SO:0001217,UniParc:UPI0000165173,UniRef:UniRef100_A0A0H3LKN0,UniRef:UniRef50_A0A0J6YSM7,UniRef:UniRef90_A0A0H3LKN0
contig_1	Infernal	gene	3433422	3433466	.	-	.	ID=GCA000153685_03224_gene;locus_tag=GCA000153685_03224;gene=Ms_AS-5
contig_1	Infernal	ncRNA	3433422	3433466	1.8e-12	-	.	ID=GCA000153685_03224;Name=Mycobacterium sRNA Ms_AS-5;locus_tag=GCA000153685_03224;product=Mycobacterium sRNA Ms_AS-5;Dbxref=RFAM:RF02465;Parent=GCA000153685_03224_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02465
contig_1	Pyrodigal	gene	3435066	3435467	.	+	.	ID=GCA000153685_03225_gene;locus_tag=GCA000153685_03225
contig_1	Pyrodigal	CDS	3435066	3435467	.	+	0	ID=GCA000153685_03225;Name=Hydroxylaminobenzene mutase;locus_tag=GCA000153685_03225;product=Hydroxylaminobenzene mutase;Parent=GCA000153685_03225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416059.1,SO:0001217,UniParc:UPI00000D5FBF,UniRef:UniRef100_A5U793,UniRef:UniRef50_O52216,UniRef:UniRef90_A5U793
contig_1	Pyrodigal	gene	3435483	3436310	.	-	.	ID=GCA000153685_03226_gene;locus_tag=GCA000153685_03226
contig_1	Pyrodigal	CDS	3435483	3436310	.	-	0	ID=GCA000153685_03226;Name=Luciferase-like domain-containing protein;locus_tag=GCA000153685_03226;product=Luciferase-like domain-containing protein;Parent=GCA000153685_03226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416061.1,SO:0001217,UniParc:UPI00000D1186,UniRef:UniRef100_I6XG43,UniRef:UniRef50_A0A178X8P3,UniRef:UniRef90_A0A0H3LDK3
contig_1	Pyrodigal	gene	3436369	3439701	.	-	.	ID=GCA000153685_03227_gene;locus_tag=GCA000153685_03227;gene=pknK
contig_1	Pyrodigal	CDS	3436369	3439701	.	-	0	ID=GCA000153685_03227;Name=serine/threonine protein kinase PknK;locus_tag=GCA000153685_03227;product=serine/threonine protein kinase PknK;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005576,GO:0005829,GO:0005886,GO:0006355,GO:0009274,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042802,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0046872,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1903338,GO:1990244;gene=pknK;Parent=GCA000153685_03227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899905,KEGG:K13419,RefSeq:WP_003899905.1,SO:0001217,UniParc:UPI0000131B81,UniRef:UniRef100_P9WI65,UniRef:UniRef50_P9WI65,UniRef:UniRef90_P9WI65;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	3439753	3440991	.	+	.	ID=GCA000153685_03228_gene;locus_tag=GCA000153685_03228
contig_1	Pyrodigal	CDS	3439753	3440991	.	+	0	ID=GCA000153685_03228;Name=hypothetical protein;locus_tag=GCA000153685_03228;product=hypothetical protein;Parent=GCA000153685_03228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416066.1,SO:0001217,UniParc:UPI0000165333,UniRef:UniRef100_O53298,UniRef:UniRef50_O53298,UniRef:UniRef90_O53298,PFAM:PF09970.15
contig_1	Pyrodigal	gene	3441117	3442139	.	-	.	ID=GCA000153685_03229_gene;locus_tag=GCA000153685_03229;gene=virS
contig_1	Pyrodigal	CDS	3441117	3442139	.	-	0	ID=GCA000153685_03229;Name=HTH-type transcriptional regulator VirS;locus_tag=GCA000153685_03229;product=HTH-type transcriptional regulator VirS;Dbxref=GO:0000976,GO:0003700,GO:0005829,GO:0045893,GO:0071468;gene=virS;Parent=GCA000153685_03229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416068.1,SO:0001217,UniParc:UPI0000138857,UniRef:UniRef100_P9WMJ3,UniRef:UniRef50_P9WMJ3,UniRef:UniRef90_P9WMJ3
contig_1	Pyrodigal	gene	3442217	3443704	.	+	.	ID=GCA000153685_03230_gene;locus_tag=GCA000153685_03230;gene=mymA
contig_1	Pyrodigal	CDS	3442217	3443704	.	+	0	ID=GCA000153685_03230;Name=Putative FAD-containing monooxygenase MymA;locus_tag=GCA000153685_03230;product=Putative FAD-containing monooxygenase MymA;Dbxref=GO:0004499,GO:0009274,GO:0010447,GO:0050660,GO:0050661,GO:0051701;gene=mymA;Parent=GCA000153685_03230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10215,RefSeq:WP_003899906.1,SO:0001217,UniParc:UPI00000D105E,UniRef:UniRef100_P9WNF7,UniRef:UniRef50_P9WNF7,UniRef:UniRef90_P9WNF7;ec_number=1.14.13.-
contig_1	Pyrodigal	gene	3443710	3444636	.	+	.	ID=GCA000153685_03231_gene;locus_tag=GCA000153685_03231;gene=lipR
contig_1	Pyrodigal	CDS	3443710	3444636	.	+	0	ID=GCA000153685_03231;Name=Putative acetyl-hydrolase LipR;locus_tag=GCA000153685_03231;product=Putative acetyl-hydrolase LipR;Dbxref=GO:0004806,GO:0005886,GO:0010447,GO:0051701;gene=lipR;Parent=GCA000153685_03231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900626.1,SO:0001217,UniParc:UPI00012781F9,UniRef:UniRef100_A0A0H3LDQ6,UniRef:UniRef50_P9WK85,UniRef:UniRef90_P9WK85;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3444633	3445463	.	+	.	ID=GCA000153685_03232_gene;locus_tag=GCA000153685_03232;gene=sadH
contig_1	Pyrodigal	CDS	3444633	3445463	.	+	0	ID=GCA000153685_03232;Name=Putative oxidoreductase SadH;locus_tag=GCA000153685_03232;product=Putative oxidoreductase SadH;Dbxref=GO:0005829,GO:0010447,GO:0016491,GO:0051701;gene=sadH;Parent=GCA000153685_03232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416074.1,SO:0001217,UniParc:UPI00000D5EB9,UniRef:UniRef100_P9WGP9,UniRef:UniRef50_P9WGP9,UniRef:UniRef90_P9WGP9;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3445494	3446600	.	+	.	ID=GCA000153685_03233_gene;locus_tag=GCA000153685_03233;gene=adhD
contig_1	Pyrodigal	CDS	3445494	3446600	.	+	0	ID=GCA000153685_03233;Name=Putative alcohol dehydrogenase D;locus_tag=GCA000153685_03233;product=Putative alcohol dehydrogenase D;Dbxref=GO:0004022,GO:0005829,GO:0008270,GO:0009274,GO:0010447,GO:0046294,GO:0051701,GO:0051903;gene=adhD;Parent=GCA000153685_03233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00119,RefSeq:WP_003416075.1,SO:0001217,UniParc:UPI00000D5F83,UniRef:UniRef100_P9WQB9,UniRef:UniRef50_P81747,UniRef:UniRef90_P9WQB9;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	3446638	3448056	.	+	.	ID=GCA000153685_03234_gene;locus_tag=GCA000153685_03234
contig_1	Pyrodigal	CDS	3446638	3448056	.	+	0	ID=GCA000153685_03234;Name=Putative diacyglycerol O-acyltransferase Rv3087;locus_tag=GCA000153685_03234;product=Putative diacyglycerol O-acyltransferase Rv3087;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0010447,GO:0019432,GO:0051701,GO:0052167,GO:0071731;Parent=GCA000153685_03234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003906978.1,SO:0001217,UniParc:UPI000013C180,UniRef:UniRef100_P9WKB1,UniRef:UniRef50_P9WKB1,UniRef:UniRef90_P9WKB1;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3448053	3449477	.	+	.	ID=GCA000153685_03235_gene;locus_tag=GCA000153685_03235;gene=tgs4
contig_1	Pyrodigal	CDS	3448053	3449477	.	+	0	ID=GCA000153685_03235;Name=Putative diacyglycerol O-acyltransferase Mb3115;locus_tag=GCA000153685_03235;product=Putative diacyglycerol O-acyltransferase Mb3115;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0019432,GO:0051701,GO:0071731;gene=tgs4;Parent=GCA000153685_03235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416079.1,SO:0001217,UniParc:UPI000013C181,UniRef:UniRef100_P9WKC3,UniRef:UniRef50_P9WKC3,UniRef:UniRef90_P9WKC3;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3449474	3450985	.	+	.	ID=GCA000153685_03236_gene;locus_tag=GCA000153685_03236;gene=fadD13
contig_1	Pyrodigal	CDS	3449474	3450985	.	+	0	ID=GCA000153685_03236;Name=long-chain-fatty-acid--CoA ligase FadD13;locus_tag=GCA000153685_03236;product=long-chain-fatty-acid--CoA ligase FadD13;Dbxref=GO:0004321,GO:0004467,GO:0005524,GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0010447,GO:0016405,GO:0051701;gene=fadD13;Parent=GCA000153685_03236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416081,RefSeq:WP_003900627.1,SO:0001217,UniParc:UPI00012781FA,UniRef:UniRef100_UPI00012781FA,UniRef:UniRef50_P9WQ37,UniRef:UniRef90_P9WQ37;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	3451482	3451784	.	-	.	ID=GCA000153685_03237_gene;locus_tag=GCA000153685_03237
contig_1	Pyrodigal	CDS	3451482	3451784	.	-	0	ID=GCA000153685_03237;Name=hypothetical protein;locus_tag=GCA000153685_03237;product=hypothetical protein;Parent=GCA000153685_03237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416083.1,SO:0001217,UniParc:UPI00000D2D49,UniRef:UniRef100_A0A0H3LHZ2,UniRef:UniRef50_R4M1N6,UniRef:UniRef90_R4M1N6
contig_1	Pyrodigal	gene	3451924	3452811	.	+	.	ID=GCA000153685_03238_gene;locus_tag=GCA000153685_03238
contig_1	Pyrodigal	CDS	3451924	3452811	.	+	0	ID=GCA000153685_03238;Name=Protease Rv3090;locus_tag=GCA000153685_03238;product=Protease Rv3090;Dbxref=GO:0005576,GO:0005886,GO:0006508,GO:0008233;Parent=GCA000153685_03238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416086.1,SO:0001217,UniParc:UPI00000CCADB,UniRef:UniRef100_O05769,UniRef:UniRef50_O05769,UniRef:UniRef90_O05769;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	3452760	3454520	.	+	.	ID=GCA000153685_03239_gene;locus_tag=GCA000153685_03239
contig_1	Pyrodigal	CDS	3452760	3454520	.	+	0	ID=GCA000153685_03239;Name=PNPLA domain-containing protein;locus_tag=GCA000153685_03239;product=PNPLA domain-containing protein;Parent=GCA000153685_03239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002FBF04C,UniRef:UniRef100_I6YB49,UniRef:UniRef50_A0A0F5MU74,UniRef:UniRef90_A0A829CB60
contig_1	Pyrodigal	gene	3454527	3456482	.	-	.	ID=GCA000153685_03240_gene;locus_tag=GCA000153685_03240
contig_1	Pyrodigal	CDS	3454527	3456482	.	-	0	ID=GCA000153685_03240;Name=Conserved integral membrane protein;locus_tag=GCA000153685_03240;product=Conserved integral membrane protein;Parent=GCA000153685_03240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09781,SO:0001217,UniParc:UPI000169A20F,UniRef:UniRef100_A5U7A7,UniRef:UniRef50_A5U7A7,UniRef:UniRef90_A5U7A7
contig_1	Pyrodigal	gene	3456479	3457609	.	-	.	ID=GCA000153685_03241_gene;locus_tag=GCA000153685_03241
contig_1	Pyrodigal	CDS	3456479	3457609	.	-	0	ID=GCA000153685_03241;Name=Hydroxylase;locus_tag=GCA000153685_03241;product=Hydroxylase;Parent=GCA000153685_03241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22027,RefSeq:WP_003416097.1,SO:0001217,UniParc:UPI0000165334,UniRef:UniRef100_O05773,UniRef:UniRef50_A0A9P3Q8U1,UniRef:UniRef90_O05773;ec_number=1.14.13.235
contig_1	Pyrodigal	gene	3457691	3458167	.	+	.	ID=GCA000153685_03242_gene;locus_tag=GCA000153685_03242
contig_1	Pyrodigal	CDS	3457691	3458167	.	+	0	ID=GCA000153685_03242;Name=putative HTH-type transcriptional regulator Mb3122;locus_tag=GCA000153685_03242;product=putative HTH-type transcriptional regulator Mb3122;Dbxref=GO:0003677;Parent=GCA000153685_03242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416099.1,SO:0001217,UniParc:UPI000013C182,UniRef:UniRef100_P9WMG3,UniRef:UniRef50_P9WMG3,UniRef:UniRef90_P9WMG3
contig_1	Pyrodigal	gene	3458265	3459404	.	+	.	ID=GCA000153685_03243_gene;locus_tag=GCA000153685_03243
contig_1	Pyrodigal	CDS	3458265	3459404	.	+	0	ID=GCA000153685_03243;Name=1%2C4-beta-xylanase;locus_tag=GCA000153685_03243;product=1%2C4-beta-xylanase;Parent=GCA000153685_03243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899909.1,SO:0001217,UniParc:UPI00000D0FAD,UniRef:UniRef100_I6YB54,UniRef:UniRef50_F5Z016,UniRef:UniRef90_I6YB54
contig_1	Pyrodigal	gene	3459496	3460806	.	-	.	ID=GCA000153685_03244_gene;locus_tag=GCA000153685_03244;gene=lipY
contig_1	Pyrodigal	CDS	3459496	3460806	.	-	0	ID=GCA000153685_03244;Name=triacylglycerol lipase LipY;locus_tag=GCA000153685_03244;product=triacylglycerol lipase LipY;Dbxref=GO:0004806,GO:0005576,GO:0005737,GO:0008126,GO:0009986,GO:0016042;gene=lipY;Parent=GCA000153685_03244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912072,SO:0001217,UniParc:UPI0001277FA8,UniRef:UniRef100_A0A654ZXQ4,UniRef:UniRef50_I6Y2J4,UniRef:UniRef90_I6Y2J4;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	3461130	3461330	.	+	.	ID=GCA000153685_03245_gene;locus_tag=GCA000153685_03245
contig_1	Pyrodigal	CDS	3461130	3461330	.	+	0	ID=GCA000153685_03245;Name=Putative antitoxin Rv3098B/RVBD_3098B;locus_tag=GCA000153685_03245;product=Putative antitoxin Rv3098B/RVBD_3098B;Parent=GCA000153685_03245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7BF,UniRef:UniRef100_V5QPS4,UniRef:UniRef50_V5QPS4,UniRef:UniRef90_V5QPS4
contig_1	Pyrodigal	gene	3461327	3461644	.	+	.	ID=GCA000153685_03246_gene;locus_tag=GCA000153685_03246;gene=pemK
contig_1	Pyrodigal	CDS	3461327	3461644	.	+	0	ID=GCA000153685_03246;Name=type II toxin-antitoxin system toxin endoribonuclease PemK;locus_tag=GCA000153685_03246;product=type II toxin-antitoxin system toxin endoribonuclease PemK;Dbxref=GO:0003677,GO:0004521,GO:0006402,GO:0016075;gene=pemK;Parent=GCA000153685_03246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001398199,BlastRules:WP_003416110,SO:0001217,UniParc:UPI0001C551AD,UniRef:UniRef100_A0A0E8V3W1,UniRef:UniRef50_V5QRX7,UniRef:UniRef90_V5QRX7
contig_1	Aragorn	gene	3461686	3462052	.	-	.	ID=GCA000153685_03247_gene;locus_tag=GCA000153685_03247;gene=ssrA
contig_1	Aragorn	tmRNA	3461686	3462052	.	-	.	ID=GCA000153685_03247;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000153685_03247;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=complement(3461780..3461818);Parent=GCA000153685_03247_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	3462131	3462982	.	-	.	ID=GCA000153685_03248_gene;locus_tag=GCA000153685_03248
contig_1	Pyrodigal	CDS	3462131	3462982	.	-	0	ID=GCA000153685_03248;Name=Conserved protein;locus_tag=GCA000153685_03248;product=Conserved protein;Parent=GCA000153685_03248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416111.1,SO:0001217,UniParc:UPI00000D0FE6,UniRef:UniRef100_O05777,UniRef:UniRef50_O05777,UniRef:UniRef90_O05777
contig_1	Pyrodigal	gene	3463019	3463501	.	-	.	ID=GCA000153685_03249_gene;locus_tag=GCA000153685_03249;gene=smpB
contig_1	Pyrodigal	CDS	3463019	3463501	.	-	0	ID=GCA000153685_03249;Name=SsrA-binding protein SmpB;locus_tag=GCA000153685_03249;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000153685_03249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03664,RefSeq:WP_003416113.1,SO:0001217,UniParc:UPI0000136024,UniRef:UniRef100_P9WGD3,UniRef:UniRef50_P9WGD3,UniRef:UniRef90_P9WGD3
contig_1	Pyrodigal	gene	3463504	3464397	.	-	.	ID=GCA000153685_03250_gene;locus_tag=GCA000153685_03250;gene=ftsX
contig_1	Pyrodigal	CDS	3463504	3464397	.	-	0	ID=GCA000153685_03250;Name=permease-like cell division protein FtsX;locus_tag=GCA000153685_03250;product=permease-like cell division protein FtsX;Dbxref=GO:0005886,GO:0009274,GO:0016020,GO:0051301;gene=ftsX;Parent=GCA000153685_03250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000625533,BlastRules:WP_000645021,BlastRules:WP_003416117,BlastRules:WP_009968247,RefSeq:WP_003416117.1,SO:0001217,UniParc:UPI000012AD01,UniRef:UniRef100_P9WG19,UniRef:UniRef50_P9WG19,UniRef:UniRef90_P9WG19
contig_1	Pyrodigal	gene	3464398	3465087	.	-	.	ID=GCA000153685_03251_gene;locus_tag=GCA000153685_03251;gene=ftsE
contig_1	Pyrodigal	CDS	3464398	3465087	.	-	0	ID=GCA000153685_03251;Name=cell division ATP-binding protein FtsE;locus_tag=GCA000153685_03251;product=cell division ATP-binding protein FtsE;Dbxref=GO:0000287,GO:0000910,GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0030145,GO:0051301,GO:0055085;gene=ftsE;Parent=GCA000153685_03251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2884,COG:D,RefSeq:WP_003416120.1,SO:0001217,UniParc:UPI00000D0FA6,UniRef:UniRef100_O05779,UniRef:UniRef50_O05779,UniRef:UniRef90_O05779
contig_1	Pyrodigal	gene	3465131	3465568	.	-	.	ID=GCA000153685_03252_gene;locus_tag=GCA000153685_03252
contig_1	Pyrodigal	CDS	3465131	3465568	.	-	0	ID=GCA000153685_03252;Name=Proline rich protein;locus_tag=GCA000153685_03252;product=Proline rich protein;Parent=GCA000153685_03252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416124.1,SO:0001217,UniParc:UPI0000165336,UniRef:UniRef100_A0A0H3LKT9,UniRef:UniRef50_A0A0H3LKT9,UniRef:UniRef90_A0A0H3LKT9
contig_1	Pyrodigal	gene	3465570	3466370	.	-	.	ID=GCA000153685_03253_gene;locus_tag=GCA000153685_03253;gene=mscS
contig_1	Pyrodigal	CDS	3465570	3466370	.	-	0	ID=GCA000153685_03253;Name=Mechanosensitive ion channel protein MscS;locus_tag=GCA000153685_03253;product=Mechanosensitive ion channel protein MscS;gene=mscS;Parent=GCA000153685_03253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAI8XQ49,UniRef:UniRef90_A0A1X2M0T4
contig_1	Pyrodigal	gene	3466349	3466495	.	-	.	ID=GCA000153685_03254_gene;locus_tag=GCA000153685_03254
contig_1	Pyrodigal	CDS	3466349	3466495	.	-	0	ID=GCA000153685_03254;Name=hypothetical protein;locus_tag=GCA000153685_03254;product=hypothetical protein;Parent=GCA000153685_03254_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	3466485	3467621	.	-	.	ID=GCA000153685_03255_gene;locus_tag=GCA000153685_03255;gene=prfB
contig_1	Pyrodigal	CDS	3466485	3467621	.	-	0	ID=GCA000153685_03255;Name=peptide chain release factor 2;locus_tag=GCA000153685_03255;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfB;Parent=GCA000153685_03255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1186,COG:J,KEGG:K02836,RefSeq:WP_003899912.1,SO:0001217,UniParc:UPI0000165337,UniRef:UniRef100_A0A679LIB1,UniRef:UniRef50_P9WHG1,UniRef:UniRef90_P9WHG1
contig_1	Pyrodigal	gene	3467725	3469095	.	+	.	ID=GCA000153685_03256_gene;locus_tag=GCA000153685_03256;gene=fprA
contig_1	Pyrodigal	CDS	3467725	3469095	.	+	0	ID=GCA000153685_03256;Name=ferredoxin--NADP(+) reductase FprA;locus_tag=GCA000153685_03256;product=ferredoxin--NADP(+) reductase FprA;Dbxref=GO:0004324,GO:0008860,GO:0009274,GO:0016491,GO:0050660,GO:0070401;gene=fprA;Parent=GCA000153685_03256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900632,RefSeq:WP_003900632.1,SO:0001217,UniParc:UPI00001124C6,UniRef:UniRef100_P9WIQ3,UniRef:UniRef50_P9WIQ3,UniRef:UniRef90_P9WIQ3;ec_number=1.18.1.2
contig_1	Pyrodigal	gene	3469096	3470679	.	-	.	ID=GCA000153685_03257_gene;locus_tag=GCA000153685_03257
contig_1	Pyrodigal	CDS	3469096	3470679	.	-	0	ID=GCA000153685_03257;Name=Alkyldihydroxyacetonephosphate synthase;locus_tag=GCA000153685_03257;product=Alkyldihydroxyacetonephosphate synthase;Parent=GCA000153685_03257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899914.1,SO:0001217,UniParc:UPI00000D5FB9,UniRef:UniRef100_O05784,UniRef:UniRef50_A0A654TT18,UniRef:UniRef90_A0A654TT18
contig_1	Pyrodigal	gene	3470690	3470893	.	-	.	ID=GCA000153685_03258_gene;locus_tag=GCA000153685_03258
contig_1	Pyrodigal	CDS	3470690	3470893	.	-	0	ID=GCA000153685_03258;Name=Transmembrane protein;locus_tag=GCA000153685_03258;product=Transmembrane protein;Parent=GCA000153685_03258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913800.1,SO:0001217,UniParc:UPI0001E62105,UniRef:UniRef100_A0A0H3LKU3,UniRef:UniRef50_A0A448IXN1,UniRef:UniRef90_A0A0H3LKU3
contig_1	Pyrodigal	gene	3471499	3472446	.	+	.	ID=GCA000153685_03259_gene;locus_tag=GCA000153685_03259;gene=moaA
contig_1	Pyrodigal	CDS	3471499	3472446	.	+	0	ID=GCA000153685_03259;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000153685_03259;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0005886,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000153685_03259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A253,UniRef:UniRef100_P9WJS3,UniRef:UniRef50_P9WJS3,UniRef:UniRef90_P9WJS3;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	3472497	3472892	.	+	.	ID=GCA000153685_03260_gene;locus_tag=GCA000153685_03260
contig_1	Pyrodigal	CDS	3472497	3472892	.	+	0	ID=GCA000153685_03260;Name=Putative pterin-4-alpha-carbinolamine dehydratase;locus_tag=GCA000153685_03260;product=Putative pterin-4-alpha-carbinolamine dehydratase;Parent=GCA000153685_03260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416149.1,SO:0001217,UniParc:UPI0000165339,UniRef:UniRef100_Q6MX13,UniRef:UniRef50_Q6MX13,UniRef:UniRef90_Q6MX13
contig_1	Pyrodigal	gene	3472889	3473401	.	+	.	ID=GCA000153685_03261_gene;locus_tag=GCA000153685_03261;gene=moaC
contig_1	Pyrodigal	CDS	3472889	3473401	.	+	0	ID=GCA000153685_03261;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000153685_03261;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0005576,GO:0006777,GO:0052170,GO:0061799;gene=moaC;Parent=GCA000153685_03261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03637,RefSeq:WP_003899917.1,SO:0001217,UniParc:UPI000012F366,UniRef:UniRef100_P9WJR9,UniRef:UniRef50_P9WJR9,UniRef:UniRef90_P9WJR9;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	3473418	3473669	.	+	.	ID=GCA000153685_03262_gene;locus_tag=GCA000153685_03262;gene=moaD
contig_1	Pyrodigal	CDS	3473418	3473669	.	+	0	ID=GCA000153685_03262;Name=molybdopterin converting factor subunit 1;locus_tag=GCA000153685_03262;product=molybdopterin converting factor subunit 1;Dbxref=GO:0000166,GO:0003824,GO:0006777,GO:1990133;gene=moaD;Parent=GCA000153685_03262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899918.1,SO:0001217,UniParc:UPI00000D104D,UniRef:UniRef100_L7N6B4,UniRef:UniRef50_L7N6B4,UniRef:UniRef90_L7N6B4
contig_1	Pyrodigal	gene	3473792	3474460	.	+	.	ID=GCA000153685_03263_gene;locus_tag=GCA000153685_03263
contig_1	Pyrodigal	CDS	3473792	3474460	.	+	0	ID=GCA000153685_03263;Name=putative phosphatase;locus_tag=GCA000153685_03263;product=putative phosphatase;Parent=GCA000153685_03263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899919.1,SO:0001217,UniParc:UPI000016517C,UniRef:UniRef100_A0A0H3LEY9,UniRef:UniRef50_O05790,UniRef:UniRef90_O05790
contig_1	Pyrodigal	gene	3474453	3475007	.	+	.	ID=GCA000153685_03264_gene;locus_tag=GCA000153685_03264
contig_1	Pyrodigal	CDS	3474453	3475007	.	+	0	ID=GCA000153685_03264;Name=CMP/dCMP-type deaminase domain-containing protein;locus_tag=GCA000153685_03264;product=CMP/dCMP-type deaminase domain-containing protein;Parent=GCA000153685_03264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000305BEDE,UniRef:UniRef100_A0A0E8NCL4,UniRef:UniRef50_O05791,UniRef:UniRef90_O05791
contig_1	Pyrodigal	gene	3475169	3476416	.	+	.	ID=GCA000153685_03265_gene;locus_tag=GCA000153685_03265;gene=tnp
contig_1	Pyrodigal	CDS	3475169	3476416	.	+	0	ID=GCA000153685_03265;Name=IS256 family IS1081 transposase;locus_tag=GCA000153685_03265;product=IS256 family IS1081 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006313;gene=tnp;Parent=GCA000153685_03265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1081,RefSeq:WP_003900260.1,SO:0001217,UniParc:UPI00000D2D3E,UniRef:UniRef100_Q8VIQ5,UniRef:UniRef50_P60230,UniRef:UniRef90_P60230
contig_1	Pyrodigal	gene	3476494	3477663	.	+	.	ID=GCA000153685_03266_gene;locus_tag=GCA000153685_03266;gene=moeB2
contig_1	Pyrodigal	CDS	3476494	3477663	.	+	0	ID=GCA000153685_03266;Name=Molybdenum cofactor biosynthesis protein MoeB2;locus_tag=GCA000153685_03266;product=Molybdenum cofactor biosynthesis protein MoeB2;gene=moeB2;Parent=GCA000153685_03266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899922.1,SO:0001217,UniParc:UPI00000D11A5,UniRef:UniRef100_A5U7D1,UniRef:UniRef50_A0A8J2BMQ4,UniRef:UniRef90_A5U7D1
contig_1	Pyrodigal	gene	3477692	3478525	.	+	.	ID=GCA000153685_03267_gene;locus_tag=GCA000153685_03267;gene=cysA1
contig_1	Pyrodigal	CDS	3477692	3478525	.	+	0	ID=GCA000153685_03267;Name=Putative thiosulfate sulfurtransferase 1;locus_tag=GCA000153685_03267;product=Putative thiosulfate sulfurtransferase 1;Dbxref=GO:0004792;gene=cysA1;Parent=GCA000153685_03267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003404293.1,SO:0001217,UniParc:UPI0000136F18,UniRef:UniRef100_P9WHF9,UniRef:UniRef50_P9WHF9,UniRef:UniRef90_P9WHF9;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	3478557	3478829	.	+	.	ID=GCA000153685_03268_gene;locus_tag=GCA000153685_03268
contig_1	Pyrodigal	CDS	3478557	3478829	.	+	0	ID=GCA000153685_03268;Name=DUF1416 domain-containing protein;locus_tag=GCA000153685_03268;product=DUF1416 domain-containing protein;Parent=GCA000153685_03268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61F5C,UniRef:UniRef100_A0A0E8BR24,UniRef:UniRef50_P0CG96,UniRef:UniRef90_X8CPE3
contig_1	Pyrodigal	gene	3478850	3479293	.	+	.	ID=GCA000153685_03269_gene;locus_tag=GCA000153685_03269;gene=moaE1
contig_1	Pyrodigal	CDS	3478850	3479293	.	+	0	ID=GCA000153685_03269;Name=Molybdopterin synthase catalytic subunit 1;locus_tag=GCA000153685_03269;product=Molybdopterin synthase catalytic subunit 1;Dbxref=GO:0005829,GO:0006777,GO:0030366;gene=moaE1;Parent=GCA000153685_03269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899923.1,SO:0001217,UniParc:UPI000012F336,UniRef:UniRef100_P9WJR3,UniRef:UniRef50_P9WJR3,UniRef:UniRef90_P9WJR3;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	3479290	3479892	.	+	.	ID=GCA000153685_03270_gene;locus_tag=GCA000153685_03270
contig_1	Pyrodigal	CDS	3479290	3479892	.	+	0	ID=GCA000153685_03270;Name=Methyltransferase domain-containing protein;locus_tag=GCA000153685_03270;product=Methyltransferase domain-containing protein;Parent=GCA000153685_03270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899924.1,SO:0001217,UniParc:UPI00000D0F5B,UniRef:UniRef100_O05796,UniRef:UniRef50_O05796,UniRef:UniRef90_O05796
contig_1	Pyrodigal	gene	3480227	3481429	.	+	.	ID=GCA000153685_03271_gene;locus_tag=GCA000153685_03271;gene=cyp141
contig_1	Pyrodigal	CDS	3480227	3481429	.	+	0	ID=GCA000153685_03271;Name=cytochrome P450 Cyp141;locus_tag=GCA000153685_03271;product=cytochrome P450 Cyp141;Dbxref=GO:0005506,GO:0005886,GO:0006707,GO:0008395,GO:0020037,GO:0036199;gene=cyp141;Parent=GCA000153685_03271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917126,RefSeq:WP_003899925.1,SO:0001217,UniParc:UPI000016517D,UniRef:UniRef100_P9WPL6,UniRef:UniRef50_P9WPL7,UniRef:UniRef90_P9WPL7;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	3481852	3482277	.	+	.	ID=GCA000153685_03272_gene;locus_tag=GCA000153685_03272
contig_1	Pyrodigal	CDS	3481852	3482277	.	+	0	ID=GCA000153685_03272;Name=Transposase;locus_tag=GCA000153685_03272;product=Transposase;Parent=GCA000153685_03272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912101.1,SO:0001217,UniParc:UPI00005EE7C2,UniRef:UniRef100_A0A0H3LEZ7,UniRef:UniRef50_O07033,UniRef:UniRef90_O07033
contig_1	Pyrodigal	gene	3482524	3482793	.	-	.	ID=GCA000153685_03273_gene;locus_tag=GCA000153685_03273
contig_1	Pyrodigal	CDS	3482524	3482793	.	-	0	ID=GCA000153685_03273;Name=hypothetical protein;locus_tag=GCA000153685_03273;product=hypothetical protein;Parent=GCA000153685_03273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000320E778,UniRef:UniRef100_A0A0E8NJE7,UniRef:UniRef50_A0A0E8NJE7,UniRef:UniRef90_A0A0E8NJE7
contig_1	Pyrodigal	gene	3483200	3484093	.	+	.	ID=GCA000153685_03274_gene;locus_tag=GCA000153685_03274;gene=moaR1
contig_1	Pyrodigal	CDS	3483200	3484093	.	+	0	ID=GCA000153685_03274;Name=transcriptional regulator MoaR1;locus_tag=GCA000153685_03274;product=transcriptional regulator MoaR1;Dbxref=GO:0000160,GO:0003677,GO:0006355,GO:0032324;gene=moaR1;Parent=GCA000153685_03274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003902409,KEGG:K22894,SO:0001217,UniParc:UPI00015456F7,UniRef:UniRef100_A0A0H3LDU9,UniRef:UniRef50_O05797,UniRef:UniRef90_O05797
contig_1	Pyrodigal	gene	3484194	3484799	.	-	.	ID=GCA000153685_03275_gene;locus_tag=GCA000153685_03275;gene=pPE49
contig_1	Pyrodigal	CDS	3484194	3484799	.	-	0	ID=GCA000153685_03275;Name=putative PPE family protein PPE49;locus_tag=GCA000153685_03275;product=putative PPE family protein PPE49;Dbxref=GO:0052572;gene=pPE49;Parent=GCA000153685_03275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D33A,UniRef:UniRef100_A0A0H3LI36,UniRef:UniRef50_P9WHZ9,UniRef:UniRef90_P9WHY5
contig_1	Pyrodigal	gene	3484821	3485369	.	-	.	ID=GCA000153685_03276_gene;locus_tag=GCA000153685_03276;gene=pPE49
contig_1	Pyrodigal	CDS	3484821	3485369	.	-	0	ID=GCA000153685_03276;Name=putative PPE family protein PPE49;locus_tag=GCA000153685_03276;product=putative PPE family protein PPE49;Dbxref=GO:0052572;gene=pPE49;Parent=GCA000153685_03276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456479.1,SO:0001217,UniParc:UPI000252D33B,UniRef:UniRef100_P9WHY5,UniRef:UniRef50_P9WHZ9,UniRef:UniRef90_P9WHY5
contig_1	Pyrodigal	gene	3485865	3486899	.	+	.	ID=GCA000153685_03277_gene;locus_tag=GCA000153685_03277
contig_1	Pyrodigal	CDS	3485865	3486899	.	+	0	ID=GCA000153685_03277;Name=putative protein Rv3127;locus_tag=GCA000153685_03277;product=putative protein Rv3127;Dbxref=GO:0005886,GO:0009274,GO:0016491;Parent=GCA000153685_03277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416354.1,SO:0001217,UniParc:UPI000016533C,UniRef:UniRef100_P9WL07,UniRef:UniRef50_P9WL07,UniRef:UniRef90_P9WL07
contig_1	Pyrodigal	gene	3486886	3487236	.	-	.	ID=GCA000153685_03278_gene;locus_tag=GCA000153685_03278
contig_1	Pyrodigal	CDS	3486886	3487236	.	-	0	ID=GCA000153685_03278;Name=Transposase;locus_tag=GCA000153685_03278;product=Transposase;Parent=GCA000153685_03278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416355.1,SO:0001217,UniParc:UPI00001A91BD,UniRef:UniRef100_A0A1R3Y3C7,UniRef:UniRef50_A0A7I7L5I9,UniRef:UniRef90_A0A1R3Y3C7
contig_1	Pyrodigal	gene	3487318	3487851	.	-	.	ID=GCA000153685_03279_gene;locus_tag=GCA000153685_03279
contig_1	Pyrodigal	CDS	3487318	3487851	.	-	0	ID=GCA000153685_03279;Name=Integrase catalytic domain-containing protein;locus_tag=GCA000153685_03279;product=Integrase catalytic domain-containing protein;Parent=GCA000153685_03279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003915348.1,SO:0001217,UniParc:UPI00005EE7C6,UniRef:UniRef100_A0A0E7SVX7,UniRef:UniRef50_A5U7E3,UniRef:UniRef90_A5U7E3
contig_1	Pyrodigal	gene	3488396	3488710	.	+	.	ID=GCA000153685_03280_gene;locus_tag=GCA000153685_03280
contig_1	Pyrodigal	CDS	3488396	3488710	.	+	0	ID=GCA000153685_03280;Name=putative protein Rv3129;locus_tag=GCA000153685_03280;product=putative protein Rv3129;Parent=GCA000153685_03280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00039D95CB,UniRef:UniRef100_A0A0E8NM29,UniRef:UniRef50_P9WL05,UniRef:UniRef90_P9WL05
contig_1	Pyrodigal	gene	3488693	3490084	.	-	.	ID=GCA000153685_03281_gene;locus_tag=GCA000153685_03281;gene=tgs1
contig_1	Pyrodigal	CDS	3488693	3490084	.	-	0	ID=GCA000153685_03281;Name=diacyglycerol O-acyltransferase;locus_tag=GCA000153685_03281;product=diacyglycerol O-acyltransferase;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0019432,GO:0051701,GO:0071731;gene=tgs1;Parent=GCA000153685_03281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899932,RefSeq:WP_003899932.1,SO:0001217,UniParc:UPI000013C1A0,UniRef:UniRef100_P9WKC9,UniRef:UniRef50_P9WKC9,UniRef:UniRef90_P9WKC9;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3490269	3491267	.	+	.	ID=GCA000153685_03282_gene;locus_tag=GCA000153685_03282
contig_1	Pyrodigal	CDS	3490269	3491267	.	+	0	ID=GCA000153685_03282;Name=Putative NAD(P)H nitroreductase Rv3131;locus_tag=GCA000153685_03282;product=Putative NAD(P)H nitroreductase Rv3131;Dbxref=GO:0005829,GO:0005886,GO:0016491;Parent=GCA000153685_03282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416362.1,SO:0001217,UniParc:UPI000016533D,UniRef:UniRef100_P9WIZ7,UniRef:UniRef50_P9WIZ7,UniRef:UniRef90_P9WIZ7
contig_1	Pyrodigal	gene	3491247	3492983	.	-	.	ID=GCA000153685_03283_gene;locus_tag=GCA000153685_03283;gene=devS
contig_1	Pyrodigal	CDS	3491247	3492983	.	-	0	ID=GCA000153685_03283;Name=two-component system sensor histidine kinase DevS;locus_tag=GCA000153685_03283;product=two-component system sensor histidine kinase DevS;Dbxref=GO:0000155,GO:0000287,GO:0004672,GO:0005524,GO:0005737,GO:0005886,GO:0009274,GO:0019825,GO:0019826,GO:0020037,GO:0046983,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070483;gene=devS;Parent=GCA000153685_03283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899933,RefSeq:WP_003899933.1,SO:0001217,UniParc:UPI000004C5F4,UniRef:UniRef100_P9WGK3,UniRef:UniRef50_P9WGK3,UniRef:UniRef90_P9WGK3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3492980	3493633	.	-	.	ID=GCA000153685_03284_gene;locus_tag=GCA000153685_03284;gene=devR
contig_1	Pyrodigal	CDS	3492980	3493633	.	-	0	ID=GCA000153685_03284;Name=two-component system response regulator DevR;locus_tag=GCA000153685_03284;product=two-component system response regulator DevR;Dbxref=GO:0000160,GO:0001666,GO:0003677,GO:0003700,GO:0005615,GO:0005829,GO:0005886,GO:0009274,GO:0022611,GO:0044161,GO:0045893,GO:0072493;gene=devR;Parent=GCA000153685_03284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416369,BlastRules:WP_003896645,KEGG:K07695,RefSeq:WP_003416369.1,SO:0001217,UniParc:UPI00000BFDEE,UniRef:UniRef100_P9WMF9,UniRef:UniRef50_P9WMF9,UniRef:UniRef90_P9WMF9
contig_1	Pyrodigal	gene	3493661	3494467	.	-	.	ID=GCA000153685_03285_gene;locus_tag=GCA000153685_03285
contig_1	Pyrodigal	CDS	3493661	3494467	.	-	0	ID=GCA000153685_03285;Name=Universal stress protein Rv3134c;locus_tag=GCA000153685_03285;product=Universal stress protein Rv3134c;Dbxref=GO:0001666,GO:0005524,GO:0005886,GO:0009274;Parent=GCA000153685_03285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416373.1,SO:0001217,UniParc:UPI00000D603B,UniRef:UniRef100_P9WFD3,UniRef:UniRef50_P9WFD3,UniRef:UniRef90_P9WFD3
contig_1	Pyrodigal	gene	3495200	3496342	.	+	.	ID=GCA000153685_03286_gene;locus_tag=GCA000153685_03286;gene=pPE51
contig_1	Pyrodigal	CDS	3495200	3496342	.	+	0	ID=GCA000153685_03286;Name=Transporter PPE51;locus_tag=GCA000153685_03286;product=Transporter PPE51;Dbxref=GO:0009274,GO:0009279,GO:0015155,GO:0015168,GO:0015254,GO:0015267,GO:0015574,GO:0015767,GO:0015771,GO:0015793,GO:0035821,GO:0042594,GO:0042783,GO:0052572,GO:0055056,GO:0071466,GO:0140321,GO:1904659,GO:1904981;gene=pPE51;Parent=GCA000153685_03286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416381.1,SO:0001217,UniParc:UPI00000D5E8E,UniRef:UniRef100_P9WHY3,UniRef:UniRef50_P9WHY3,UniRef:UniRef90_P9WHY3
contig_1	Pyrodigal	gene	3496351	3496665	.	-	.	ID=GCA000153685_03287_gene;locus_tag=GCA000153685_03287
contig_1	Pyrodigal	CDS	3496351	3496665	.	-	0	ID=GCA000153685_03287;Name=Conserved protein;locus_tag=GCA000153685_03287;product=Conserved protein;Parent=GCA000153685_03287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015340BA,UniRef:UniRef100_A5U7F2,UniRef:UniRef50_A0A0G3IU43,UniRef:UniRef90_I6Y2Q7
contig_1	Pyrodigal	gene	3496799	3497581	.	+	.	ID=GCA000153685_03288_gene;locus_tag=GCA000153685_03288;gene=hisN
contig_1	Pyrodigal	CDS	3496799	3497581	.	+	0	ID=GCA000153685_03288;Name=histidinol-phosphatase;locus_tag=GCA000153685_03288;product=histidinol-phosphatase;Dbxref=GO:0000105,GO:0004401;gene=hisN;Parent=GCA000153685_03288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416388.1,SO:0001217,UniParc:UPI0000165180,UniRef:UniRef100_A0A1R3Y3K2,UniRef:UniRef50_Q8NS80,UniRef:UniRef90_A0A1R3Y3K2;ec_number=3.1.3.15
contig_1	Pyrodigal	gene	3497601	3498689	.	+	.	ID=GCA000153685_03289_gene;locus_tag=GCA000153685_03289;gene=pflA
contig_1	Pyrodigal	CDS	3497601	3498689	.	+	0	ID=GCA000153685_03289;Name=putative pyruvate formate lyase activating protein pflA;locus_tag=GCA000153685_03289;product=putative pyruvate formate lyase activating protein pflA;gene=pflA;Parent=GCA000153685_03289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899934.1,SO:0001217,UniParc:UPI00000D116F,UniRef:UniRef100_A5U7F4,UniRef:UniRef50_D7GHF0,UniRef:UniRef90_A0A0H3MAG5
contig_1	Pyrodigal	gene	3498769	3500175	.	+	.	ID=GCA000153685_03290_gene;locus_tag=GCA000153685_03290
contig_1	Pyrodigal	CDS	3498769	3500175	.	+	0	ID=GCA000153685_03290;Name=Acyl-CoA dehydrogenase fadE24;locus_tag=GCA000153685_03290;product=Acyl-CoA dehydrogenase fadE24;Parent=GCA000153685_03290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900638.1,SO:0001217,UniParc:UPI00000D5FDD,UniRef:UniRef100_A5U7F5,UniRef:UniRef50_A0A3S4BDV1,UniRef:UniRef90_A0A0T9DYC3
contig_1	Pyrodigal	gene	3500196	3501401	.	+	.	ID=GCA000153685_03291_gene;locus_tag=GCA000153685_03291
contig_1	Pyrodigal	CDS	3500196	3501401	.	+	0	ID=GCA000153685_03291;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_03291;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_03291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899936.1,SO:0001217,UniParc:UPI00000D5FB0,UniRef:UniRef100_A5U7F6,UniRef:UniRef50_A0A1A9GNA3,UniRef:UniRef90_A0A7Z7IIC6
contig_1	Pyrodigal	gene	3501501	3502472	.	+	.	ID=GCA000153685_03292_gene;locus_tag=GCA000153685_03292
contig_1	Pyrodigal	CDS	3501501	3502472	.	+	0	ID=GCA000153685_03292;Name=NADPH quinone oxidoreductase;locus_tag=GCA000153685_03292;product=NADPH quinone oxidoreductase;Parent=GCA000153685_03292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416403.1,SO:0001217,UniParc:UPI00000D5EEE,UniRef:UniRef100_A5U7F7,UniRef:UniRef50_A0A378U6W3,UniRef:UniRef90_A0A654ZEI5
contig_1	Pyrodigal	gene	3502524	3502952	.	-	.	ID=GCA000153685_03293_gene;locus_tag=GCA000153685_03293
contig_1	Pyrodigal	CDS	3502524	3502952	.	-	0	ID=GCA000153685_03293;Name=DUF6188 domain-containing protein;locus_tag=GCA000153685_03293;product=DUF6188 domain-containing protein;Parent=GCA000153685_03293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416407.1,SO:0001217,UniParc:UPI000016533E,UniRef:UniRef100_P95184,UniRef:UniRef50_A0A1X2EFP7,UniRef:UniRef90_P95184
contig_1	Pyrodigal	gene	3503060	3503461	.	+	.	ID=GCA000153685_03294_gene;locus_tag=GCA000153685_03294
contig_1	Pyrodigal	CDS	3503060	3503461	.	+	0	ID=GCA000153685_03294;Name=putative response regulatory protein Rv3143;locus_tag=GCA000153685_03294;product=putative response regulatory protein Rv3143;Dbxref=GO:0000160,GO:0009274;Parent=GCA000153685_03294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416410.1,SO:0001217,UniParc:UPI00000D0FFE,UniRef:UniRef100_P9WGL7,UniRef:UniRef50_P9WGL7,UniRef:UniRef90_P9WGL7
contig_1	Pyrodigal	gene	3503494	3504723	.	-	.	ID=GCA000153685_03295_gene;locus_tag=GCA000153685_03295
contig_1	Pyrodigal	CDS	3503494	3504723	.	-	0	ID=GCA000153685_03295;Name=PPE domain-containing protein;locus_tag=GCA000153685_03295;product=PPE domain-containing protein;Parent=GCA000153685_03295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913805.1,SO:0001217,UniParc:UPI0000165181,UniRef:UniRef100_I6X6H8,UniRef:UniRef50_R4MM82,UniRef:UniRef90_R4MM82
contig_1	Pyrodigal	gene	3504983	3505474	.	+	.	ID=GCA000153685_03296_gene;locus_tag=GCA000153685_03296
contig_1	Pyrodigal	CDS	3504983	3505474	.	+	0	ID=GCA000153685_03296;Name=NADH-quinone oxidoreductase subunit A;locus_tag=GCA000153685_03296;product=NADH-quinone oxidoreductase subunit A;Dbxref=GO:0008137;Parent=GCA000153685_03296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7CD,UniRef:UniRef100_A0A0E7SVI8,UniRef:UniRef50_A0A0E7SVI8,UniRef:UniRef90_A0A0E7SVI8;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	3505483	3506037	.	+	.	ID=GCA000153685_03297_gene;locus_tag=GCA000153685_03297;gene=nuoB
contig_1	Pyrodigal	CDS	3505483	3506037	.	+	0	ID=GCA000153685_03297;Name=NADH-quinone oxidoreductase subunit B;locus_tag=GCA000153685_03297;product=NADH-quinone oxidoreductase subunit B;Dbxref=GO:0005506,GO:0005886,GO:0008137,GO:0009060,GO:0015990,GO:0045271,GO:0048038,GO:0050136,GO:0051539;gene=nuoB;Parent=GCA000153685_03297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0377,RefSeq:WP_003416420.1,SO:0001217,UniParc:UPI00001309D8,UniRef:UniRef100_P9WJH1,UniRef:UniRef50_Q56218,UniRef:UniRef90_P9WJH1;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3506034	3506744	.	+	.	ID=GCA000153685_03298_gene;locus_tag=GCA000153685_03298;gene=nuoC
contig_1	Pyrodigal	CDS	3506034	3506744	.	+	0	ID=GCA000153685_03298;Name=NADH-quinone oxidoreductase subunit C;locus_tag=GCA000153685_03298;product=NADH-quinone oxidoreductase subunit C;Dbxref=GO:0005829,GO:0005886,GO:0008137,GO:0048038,GO:0050136;gene=nuoC;Parent=GCA000153685_03298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416425.1,SO:0001217,UniParc:UPI00001309DC,UniRef:UniRef100_P9WJH3,UniRef:UniRef50_A0QU34,UniRef:UniRef90_P9WJH3;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3506744	3508066	.	+	.	ID=GCA000153685_03299_gene;locus_tag=GCA000153685_03299;gene=nuoD
contig_1	Pyrodigal	CDS	3506744	3508066	.	+	0	ID=GCA000153685_03299;Name=NADH-quinone oxidoreductase subunit D;locus_tag=GCA000153685_03299;product=NADH-quinone oxidoreductase subunit D;Dbxref=GO:0005886,GO:0016651,GO:0048038,GO:0050136,GO:0051287;gene=nuoD;Parent=GCA000153685_03299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416430.1,SO:0001217,UniParc:UPI00001309E3,UniRef:UniRef100_P9WJH5,UniRef:UniRef50_Q5YWD0,UniRef:UniRef90_P9WJH5;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3508063	3508821	.	+	.	ID=GCA000153685_03300_gene;locus_tag=GCA000153685_03300;gene=nuoE
contig_1	Pyrodigal	CDS	3508063	3508821	.	+	0	ID=GCA000153685_03300;Name=NADH-quinone oxidoreductase subunit NuoE;locus_tag=GCA000153685_03300;product=NADH-quinone oxidoreductase subunit NuoE;Dbxref=GO:0016491,GO:0022904,GO:0046872,GO:0048038,GO:0051537;gene=nuoE;Parent=GCA000153685_03300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416434.1,SO:0001217,UniParc:UPI00001309E8,UniRef:UniRef100_P9WIV5,UniRef:UniRef50_P9WIV5,UniRef:UniRef90_P9WIV5;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3508818	3510155	.	+	.	ID=GCA000153685_03301_gene;locus_tag=GCA000153685_03301;gene=nuoF
contig_1	Pyrodigal	CDS	3508818	3510155	.	+	0	ID=GCA000153685_03301;Name=NADH-quinone oxidoreductase subunit NuoF;locus_tag=GCA000153685_03301;product=NADH-quinone oxidoreductase subunit NuoF;Dbxref=GO:0008137,GO:0010181,GO:0045271,GO:0045333,GO:0046872,GO:0048038,GO:0050136,GO:0051287,GO:0051539;gene=nuoF;Parent=GCA000153685_03301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416439.1,SO:0001217,UniParc:UPI00001309ED,UniRef:UniRef100_P9WIV7,UniRef:UniRef50_P9WIV7,UniRef:UniRef90_P9WIV7;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3510152	3512572	.	+	.	ID=GCA000153685_03302_gene;locus_tag=GCA000153685_03302;gene=nuoG
contig_1	Pyrodigal	CDS	3510152	3512572	.	+	0	ID=GCA000153685_03302;Name=NADH-quinone oxidoreductase subunit G;locus_tag=GCA000153685_03302;product=NADH-quinone oxidoreductase subunit G;Dbxref=GO:0005886,GO:0008137,GO:0009274,GO:0016020,GO:0022904,GO:0033668,GO:0042773,GO:0043546,GO:0046872,GO:0048038,GO:0051536,GO:0051537,GO:0051539;gene=nuoG;Parent=GCA000153685_03302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899937.1,SO:0001217,UniParc:UPI00001A91C4,UniRef:UniRef100_P59962,UniRef:UniRef50_P9WIV9,UniRef:UniRef90_P9WIV9;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3512688	3513920	.	+	.	ID=GCA000153685_03303_gene;locus_tag=GCA000153685_03303;gene=nuoH
contig_1	Pyrodigal	CDS	3512688	3513920	.	+	0	ID=GCA000153685_03303;Name=NADH-quinone oxidoreductase subunit NuoH;locus_tag=GCA000153685_03303;product=NADH-quinone oxidoreductase subunit NuoH;Dbxref=GO:0005886,GO:0009060,GO:0016020,GO:0016651,GO:0016655,GO:0048038,GO:0051539;gene=nuoH;Parent=GCA000153685_03303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00337,RefSeq:WP_003416445.1,SO:0001217,UniParc:UPI00001309FC,UniRef:UniRef100_P9WIX1,UniRef:UniRef50_Q2JFL3,UniRef:UniRef90_P9WIX1;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3513913	3514548	.	+	.	ID=GCA000153685_03304_gene;locus_tag=GCA000153685_03304;gene=nuoI
contig_1	Pyrodigal	CDS	3513913	3514548	.	+	0	ID=GCA000153685_03304;Name=NADH-quinone oxidoreductase subunit NuoI;locus_tag=GCA000153685_03304;product=NADH-quinone oxidoreductase subunit NuoI;Dbxref=GO:0005506,GO:0005886,GO:0009060,GO:0016651,GO:0048038,GO:0050136,GO:0051539;gene=nuoI;Parent=GCA000153685_03304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899938.1,SO:0001217,UniParc:UPI0000130A03,UniRef:UniRef100_P9WJG9,UniRef:UniRef50_P9WJG9,UniRef:UniRef90_P9WJG9;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3514545	3515333	.	+	.	ID=GCA000153685_03305_gene;locus_tag=GCA000153685_03305
contig_1	Pyrodigal	CDS	3514545	3515333	.	+	0	ID=GCA000153685_03305;Name=NADH-quinone oxidoreductase subunit J;locus_tag=GCA000153685_03305;product=NADH-quinone oxidoreductase subunit J;Dbxref=GO:0008137;Parent=GCA000153685_03305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416449.1,SO:0001217,UniParc:UPI00000D1023,UniRef:UniRef100_P95172,UniRef:UniRef50_P95172,UniRef:UniRef90_P95172;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	3515330	3515629	.	+	.	ID=GCA000153685_03306_gene;locus_tag=GCA000153685_03306;gene=nuoK
contig_1	Pyrodigal	CDS	3515330	3515629	.	+	0	ID=GCA000153685_03306;Name=NADH-quinone oxidoreductase subunit NuoK;locus_tag=GCA000153685_03306;product=NADH-quinone oxidoreductase subunit NuoK;Dbxref=GO:0005886,GO:0016651,GO:0030964,GO:0042773,GO:0048038,GO:0050136;gene=nuoK;Parent=GCA000153685_03306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0713,KEGG:K00340,RefSeq:WP_003416452.1,SO:0001217,UniParc:UPI0000130A0E,UniRef:UniRef100_P9WIX3,UniRef:UniRef50_P9WIX3,UniRef:UniRef90_P9WIX3;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3515640	3517541	.	+	.	ID=GCA000153685_03307_gene;locus_tag=GCA000153685_03307;gene=nuoL
contig_1	Pyrodigal	CDS	3515640	3517541	.	+	0	ID=GCA000153685_03307;Name=NADH-quinone oxidoreductase subunit L;locus_tag=GCA000153685_03307;product=NADH-quinone oxidoreductase subunit L;Dbxref=GO:0005886,GO:0008137,GO:0015990,GO:0042773,GO:0048038,GO:0052572;gene=nuoL;Parent=GCA000153685_03307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00341,RefSeq:WP_003900642.1,SO:0001217,UniParc:UPI0000130A15,UniRef:UniRef100_P9WIW1,UniRef:UniRef50_P9WIW1,UniRef:UniRef90_P9WIW1;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	3517535	3519199	.	+	.	ID=GCA000153685_03308_gene;locus_tag=GCA000153685_03308;gene=nuoM
contig_1	Pyrodigal	CDS	3517535	3519199	.	+	0	ID=GCA000153685_03308;Name=NADH-quinone oxidoreductase subunit M;locus_tag=GCA000153685_03308;product=NADH-quinone oxidoreductase subunit M;Dbxref=GO:0005886,GO:0008137,GO:0009060,GO:0015990,GO:0042773,GO:0045271,GO:0048039;gene=nuoM;Parent=GCA000153685_03308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00342,SO:0001217,UniParc:UPI0000165185,UniRef:UniRef100_A0A0E8UQQ2,UniRef:UniRef50_P9WIW5,UniRef:UniRef90_P9WIW5;ec_number=7.1.1.-
contig_1	Pyrodigal	gene	3519196	3520791	.	+	.	ID=GCA000153685_03309_gene;locus_tag=GCA000153685_03309;gene=nuoN
contig_1	Pyrodigal	CDS	3519196	3520791	.	+	0	ID=GCA000153685_03309;Name=NADH-quinone oxidoreductase subunit NuoN;locus_tag=GCA000153685_03309;product=NADH-quinone oxidoreductase subunit NuoN;Dbxref=GO:0005886,GO:0008137,GO:0042773,GO:0048038,GO:0050136;gene=nuoN;Parent=GCA000153685_03309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900644.1,SO:0001217,UniParc:UPI0000130A26,UniRef:UniRef100_P9WIW9,UniRef:UniRef50_P9WIW9,UniRef:UniRef90_P9WIW9;ec_number=7.1.1.2
contig_1	Pyrodigal	gene	3520797	3522569	.	-	.	ID=GCA000153685_03310_gene;locus_tag=GCA000153685_03310
contig_1	Pyrodigal	CDS	3520797	3522569	.	-	0	ID=GCA000153685_03310;Name=PPE domain-containing protein;locus_tag=GCA000153685_03310;product=PPE domain-containing protein;Parent=GCA000153685_03310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345162.1,SO:0001217,UniParc:UPI000169A2D7,UniRef:UniRef100_Q8VJ66,UniRef:UniRef50_R4MCK7,UniRef:UniRef90_R4MCK7
contig_1	Pyrodigal	gene	3522817	3524862	.	-	.	ID=GCA000153685_03311_gene;locus_tag=GCA000153685_03311
contig_1	Pyrodigal	CDS	3522817	3524862	.	-	0	ID=GCA000153685_03311;Name=PPE FAMILY PROTEIN;locus_tag=GCA000153685_03311;product=PPE FAMILY PROTEIN;Parent=GCA000153685_03311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045A811F,UniRef:UniRef100_A0AA44LQA1,UniRef:UniRef50_A0A1X2DIV5,UniRef:UniRef90_A0A1R3Y3A8
contig_1	Pyrodigal	gene	3524893	3525534	.	-	.	ID=GCA000153685_03312_gene;locus_tag=GCA000153685_03312
contig_1	Pyrodigal	CDS	3524893	3525534	.	-	0	ID=GCA000153685_03312;Name=putative transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_03312;product=putative transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_03312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416573.1,SO:0001217,UniParc:UPI000016533F,UniRef:UniRef100_O53310,UniRef:UniRef50_A0A7Z7N944,UniRef:UniRef90_O53310
contig_1	Pyrodigal	gene	3525545	3526702	.	-	.	ID=GCA000153685_03313_gene;locus_tag=GCA000153685_03313
contig_1	Pyrodigal	CDS	3525545	3526702	.	-	0	ID=GCA000153685_03313;Name=Dioxygenase;locus_tag=GCA000153685_03313;product=Dioxygenase;Parent=GCA000153685_03313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7D2,UniRef:UniRef100_O53311,UniRef:UniRef50_A0A7Z7N970,UniRef:UniRef90_A0A0T7LCD3
contig_1	Pyrodigal	gene	3526763	3527200	.	-	.	ID=GCA000153685_03314_gene;locus_tag=GCA000153685_03314
contig_1	Pyrodigal	CDS	3526763	3527200	.	-	0	ID=GCA000153685_03314;Name=putative integral membrane protein;locus_tag=GCA000153685_03314;product=putative integral membrane protein;Parent=GCA000153685_03314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900648.1,SO:0001217,UniParc:UPI00000D1121,UniRef:UniRef100_O53312,UniRef:UniRef50_A0A1A3C4W7,UniRef:UniRef90_O53312
contig_1	Pyrodigal	gene	3527197	3528468	.	-	.	ID=GCA000153685_03315_gene;locus_tag=GCA000153685_03315
contig_1	Pyrodigal	CDS	3527197	3528468	.	-	0	ID=GCA000153685_03315;Name=DUF58 domain-containing protein;locus_tag=GCA000153685_03315;product=DUF58 domain-containing protein;Parent=GCA000153685_03315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416584.1,SO:0001217,UniParc:UPI00000D0F55,UniRef:UniRef100_O53313,UniRef:UniRef50_Q5Z2N9,UniRef:UniRef90_A0A8I0JXL8
contig_1	Pyrodigal	gene	3528498	3529460	.	-	.	ID=GCA000153685_03316_gene;locus_tag=GCA000153685_03316;gene=mMP0363
contig_1	Pyrodigal	CDS	3528498	3529460	.	-	0	ID=GCA000153685_03316;Name=ATPase RavA;locus_tag=GCA000153685_03316;product=ATPase RavA;gene=mMP0363;Parent=GCA000153685_03316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_003416588.1,SO:0001217,UniParc:UPI00000D5EE1,UniRef:UniRef100_A5U7I0,UniRef:UniRef50_A0A4V3I0X6,UniRef:UniRef90_A0A498QNV7
contig_1	Pyrodigal	gene	3529468	3529950	.	-	.	ID=GCA000153685_03317_gene;locus_tag=GCA000153685_03317
contig_1	Pyrodigal	CDS	3529468	3529950	.	-	0	ID=GCA000153685_03317;Name=DUF4129 domain-containing protein;locus_tag=GCA000153685_03317;product=DUF4129 domain-containing protein;Parent=GCA000153685_03317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416593.1,SO:0001217,UniParc:UPI00000D0F2D,UniRef:UniRef100_O53315,UniRef:UniRef50_A0A1A3E3J2,UniRef:UniRef90_O53315
contig_1	Pyrodigal	gene	3529947	3530906	.	-	.	ID=GCA000153685_03318_gene;locus_tag=GCA000153685_03318
contig_1	Pyrodigal	CDS	3529947	3530906	.	-	0	ID=GCA000153685_03318;Name=Protein-glutamine gamma-glutamyltransferase-like C-terminal domain-containing protein;locus_tag=GCA000153685_03318;product=Protein-glutamine gamma-glutamyltransferase-like C-terminal domain-containing protein;Parent=GCA000153685_03318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900649.1,SO:0001217,UniParc:UPI0000165340,UniRef:UniRef100_O53316,UniRef:UniRef50_A0A1A3BFY5,UniRef:UniRef90_A0A829C875
contig_1	Pyrodigal	gene	3530986	3531612	.	-	.	ID=GCA000153685_03319_gene;locus_tag=GCA000153685_03319;gene=tetR
contig_1	Pyrodigal	CDS	3530986	3531612	.	-	0	ID=GCA000153685_03319;Name=TetR family transcriptional regulator;locus_tag=GCA000153685_03319;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000153685_03319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416599.1,SO:0001217,UniParc:UPI0000165341,UniRef:UniRef100_Q7D607,UniRef:UniRef50_Q73UZ3,UniRef:UniRef90_R4M6G9
contig_1	Pyrodigal	gene	3531657	3532793	.	+	.	ID=GCA000153685_03320_gene;locus_tag=GCA000153685_03320
contig_1	Pyrodigal	CDS	3531657	3532793	.	+	0	ID=GCA000153685_03320;Name=Putative aminoglycoside phosphotransferase;locus_tag=GCA000153685_03320;product=Putative aminoglycoside phosphotransferase;Dbxref=GO:0005524,GO:0016301,GO:0046677,GO:0046872;Parent=GCA000153685_03320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900650.1,SO:0001217,UniParc:UPI00000D1162,UniRef:UniRef100_P9WI99,UniRef:UniRef50_P9WI99,UniRef:UniRef90_P9WI99;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	3532793	3533917	.	+	.	ID=GCA000153685_03321_gene;locus_tag=GCA000153685_03321
contig_1	Pyrodigal	CDS	3532793	3533917	.	+	0	ID=GCA000153685_03321;Name=Conserved protein;locus_tag=GCA000153685_03321;product=Conserved protein;Parent=GCA000153685_03321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416605.1,SO:0001217,UniParc:UPI0000165342,UniRef:UniRef100_O53319,UniRef:UniRef50_A0A7V9B5K7,UniRef:UniRef90_O53319
contig_1	Pyrodigal	gene	3534042	3535406	.	+	.	ID=GCA000153685_03322_gene;locus_tag=GCA000153685_03322;gene=aofH
contig_1	Pyrodigal	CDS	3534042	3535406	.	+	0	ID=GCA000153685_03322;Name=Putative flavin-containing monoamine oxidase AofH;locus_tag=GCA000153685_03322;product=Putative flavin-containing monoamine oxidase AofH;Dbxref=GO:0005829,GO:0005886,GO:0016491;gene=aofH;Parent=GCA000153685_03322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000125BA0,UniRef:UniRef100_P9WQ15,UniRef:UniRef50_P9WQ15,UniRef:UniRef90_P9WQ15;ec_number=1.4.3.-
contig_1	Pyrodigal	gene	3535401	3536372	.	-	.	ID=GCA000153685_03323_gene;locus_tag=GCA000153685_03323
contig_1	Pyrodigal	CDS	3535401	3536372	.	-	0	ID=GCA000153685_03323;Name=putative non-heme haloperoxidase Hpx;locus_tag=GCA000153685_03323;product=putative non-heme haloperoxidase Hpx;Parent=GCA000153685_03323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010924623.1,SO:0001217,UniParc:UPI00000D4F8D,UniRef:UniRef100_Q7D604,UniRef:UniRef50_A0A1X0LEN8,UniRef:UniRef90_O53321
contig_1	Pyrodigal	gene	3536437	3536919	.	-	.	ID=GCA000153685_03324_gene;locus_tag=GCA000153685_03324
contig_1	Pyrodigal	CDS	3536437	3536919	.	-	0	ID=GCA000153685_03324;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_03324;product=SnoaL-like domain-containing protein;Parent=GCA000153685_03324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900651.1,SO:0001217,UniParc:UPI00000D0F94,UniRef:UniRef100_O53322,UniRef:UniRef50_O53322,UniRef:UniRef90_O53322
contig_1	Pyrodigal	gene	3536998	3537600	.	-	.	ID=GCA000153685_03325_gene;locus_tag=GCA000153685_03325
contig_1	Pyrodigal	CDS	3536998	3537600	.	-	0	ID=GCA000153685_03325;Name=TetR/AcrR-family transcriptional regulator;locus_tag=GCA000153685_03325;product=TetR/AcrR-family transcriptional regulator;Parent=GCA000153685_03325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416617.1,SO:0001217,UniParc:UPI00000D5E94,UniRef:UniRef100_A5U7I9,UniRef:UniRef50_S2Y3H4,UniRef:UniRef90_A5U7I9
contig_1	Pyrodigal	gene	3537693	3538400	.	+	.	ID=GCA000153685_03326_gene;locus_tag=GCA000153685_03326
contig_1	Pyrodigal	CDS	3537693	3538400	.	+	0	ID=GCA000153685_03326;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03326;product=SDR family oxidoreductase;Parent=GCA000153685_03326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900652.1,SO:0001217,UniParc:UPI00000D10B9,UniRef:UniRef100_A5U7J0,UniRef:UniRef50_A0A378T7P3,UniRef:UniRef90_A0A5R1Z8I0
contig_1	Pyrodigal	gene	3538415	3539902	.	+	.	ID=GCA000153685_03327_gene;locus_tag=GCA000153685_03327
contig_1	Pyrodigal	CDS	3538415	3539902	.	+	0	ID=GCA000153685_03327;Name=amidase;locus_tag=GCA000153685_03327;product=amidase;Parent=GCA000153685_03327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416624.1,SO:0001217,UniParc:UPI00000D4F8E,UniRef:UniRef100_O53325,UniRef:UniRef50_A0A655A3S6,UniRef:UniRef90_A0A655A3S6;ec_number=3.5.1.4
contig_1	Pyrodigal	gene	3539899	3540855	.	-	.	ID=GCA000153685_03328_gene;locus_tag=GCA000153685_03328;gene=mesT
contig_1	Pyrodigal	CDS	3539899	3540855	.	-	0	ID=GCA000153685_03328;Name=epoxide hydrolase MesT;locus_tag=GCA000153685_03328;product=epoxide hydrolase MesT;gene=mesT;Parent=GCA000153685_03328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416627,RefSeq:WP_003416627.1,SO:0001217,UniParc:UPI0000165345,UniRef:UniRef100_O53326,UniRef:UniRef50_O53326,UniRef:UniRef90_O53326
contig_1	Pyrodigal	gene	3541002	3541862	.	+	.	ID=GCA000153685_03329_gene;locus_tag=GCA000153685_03329
contig_1	Pyrodigal	CDS	3541002	3541862	.	+	0	ID=GCA000153685_03329;Name=putative peroxidase (Non-haem peroxidase);locus_tag=GCA000153685_03329;product=putative peroxidase (Non-haem peroxidase);Parent=GCA000153685_03329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416628.1,SO:0001217,UniParc:UPI0000165346,UniRef:UniRef100_O53327,UniRef:UniRef50_A0A0Q5QSI3,UniRef:UniRef90_O53327
contig_1	Pyrodigal	gene	3541993	3542352	.	+	.	ID=GCA000153685_03330_gene;locus_tag=GCA000153685_03330
contig_1	Pyrodigal	CDS	3541993	3542352	.	+	0	ID=GCA000153685_03330;Name=Putative F420H(2)-dependent quinone reductase Rv3178;locus_tag=GCA000153685_03330;product=Putative F420H(2)-dependent quinone reductase Rv3178;Dbxref=GO:0005886,GO:0016491,GO:0070967;Parent=GCA000153685_03330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00540,RefSeq:WP_003416632.1,SO:0001217,UniParc:UPI0000165347,UniRef:UniRef100_O53328,UniRef:UniRef50_O53328,UniRef:UniRef90_O53328;ec_number=1.1.98.-
contig_1	Pyrodigal	gene	3543173	3544462	.	+	.	ID=GCA000153685_03331_gene;locus_tag=GCA000153685_03331
contig_1	Pyrodigal	CDS	3543173	3544462	.	+	0	ID=GCA000153685_03331;Name=ATPase AAA+ superfamily protein;locus_tag=GCA000153685_03331;product=ATPase AAA+ superfamily protein;Parent=GCA000153685_03331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07133,RefSeq:WP_003416640.1,SO:0001217,UniParc:UPI0000165348,UniRef:UniRef100_O53329,UniRef:UniRef50_Q7D5Z7,UniRef:UniRef90_Q7D5Z7
contig_1	Pyrodigal	gene	3544809	3545243	.	-	.	ID=GCA000153685_03332_gene;locus_tag=GCA000153685_03332;gene=vapC49
contig_1	Pyrodigal	CDS	3544809	3545243	.	-	0	ID=GCA000153685_03332;Name=Ribonuclease VapC49;locus_tag=GCA000153685_03332;product=Ribonuclease VapC49;Dbxref=GO:0000287,GO:0004540;gene=vapC49;Parent=GCA000153685_03332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1848,COG:V,RefSeq:WP_003899952.1,SO:0001217,UniParc:UPI00000D0F89,UniRef:UniRef100_P9WF51,UniRef:UniRef50_P9WF51,UniRef:UniRef90_P9WF51;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3545246	3545494	.	-	.	ID=GCA000153685_03333_gene;locus_tag=GCA000153685_03333
contig_1	Pyrodigal	CDS	3545246	3545494	.	-	0	ID=GCA000153685_03333;Name=Antitoxin;locus_tag=GCA000153685_03333;product=Antitoxin;Parent=GCA000153685_03333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E6231A,UniRef:UniRef100_A0A0H3LDV6,UniRef:UniRef50_A0A0I9U5S6,UniRef:UniRef90_A0A0I9U5S6
contig_1	Pyrodigal	gene	3545935	3546273	.	+	.	ID=GCA000153685_03334_gene;locus_tag=GCA000153685_03334;gene=higB3
contig_1	Pyrodigal	CDS	3545935	3546273	.	+	0	ID=GCA000153685_03334;Name=Putative toxin HigB3;locus_tag=GCA000153685_03334;product=Putative toxin HigB3;gene=higB3;Parent=GCA000153685_03334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7DB,UniRef:UniRef100_A0A0H3LIB0,UniRef:UniRef50_O53332,UniRef:UniRef90_O53332
contig_1	Pyrodigal	gene	3546276	3546599	.	+	.	ID=GCA000153685_03335_gene;locus_tag=GCA000153685_03335;gene=higA3
contig_1	Pyrodigal	CDS	3546276	3546599	.	+	0	ID=GCA000153685_03335;Name=Putative antitoxin HigA3;locus_tag=GCA000153685_03335;product=Putative antitoxin HigA3;Dbxref=GO:0003677;gene=higA3;Parent=GCA000153685_03335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E623D9,UniRef:UniRef100_O53333,UniRef:UniRef50_O53333,UniRef:UniRef90_O53333
contig_1	tRNAscan-SE	gene	3546766	3546872	.	-	.	ID=GCA000153685_03336_gene;locus_tag=GCA000153685_03336;gene=trnS;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	3546766	3546872	.	-	.	ID=GCA000153685_03336;Name=tRNA-Ser(cga);locus_tag=GCA000153685_03336;product=tRNA-Ser(cga);gene=trnS;pseudogene=unknown;anti_codon=cga;amino_acid=Ser;Parent=GCA000153685_03336_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	3547137	3547484	.	+	.	ID=GCA000153685_03337_gene;locus_tag=GCA000153685_03337
contig_1	Pyrodigal	CDS	3547137	3547484	.	+	0	ID=GCA000153685_03337;Name=putative mycobacterial cidal antitoxin Rv3188;locus_tag=GCA000153685_03337;product=putative mycobacterial cidal antitoxin Rv3188;Parent=GCA000153685_03337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899956.1,SO:0001217,UniParc:UPI00000D11C1,UniRef:UniRef100_O53334,UniRef:UniRef50_O53334,UniRef:UniRef90_O53334
contig_1	Pyrodigal	gene	3547481	3548101	.	+	.	ID=GCA000153685_03338_gene;locus_tag=GCA000153685_03338
contig_1	Pyrodigal	CDS	3547481	3548101	.	+	0	ID=GCA000153685_03338;Name=putative NAD(+) phosphorylase Rv3189;locus_tag=GCA000153685_03338;product=putative NAD(+) phosphorylase Rv3189;Dbxref=GO:0016779;Parent=GCA000153685_03338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899957.1,SO:0001217,UniParc:UPI00000D11A4,UniRef:UniRef100_O53335,UniRef:UniRef50_O53335,UniRef:UniRef90_O53335;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	3548261	3549526	.	-	.	ID=GCA000153685_03339_gene;locus_tag=GCA000153685_03339
contig_1	Pyrodigal	CDS	3548261	3549526	.	-	0	ID=GCA000153685_03339;Name=Restriction endonuclease;locus_tag=GCA000153685_03339;product=Restriction endonuclease;Parent=GCA000153685_03339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899958.1,SO:0001217,UniParc:UPI0000165189,UniRef:UniRef100_A0A0H3LIB5,UniRef:UniRef50_O53336,UniRef:UniRef90_O53336
contig_1	Pyrodigal	gene	3549694	3549903	.	+	.	ID=GCA000153685_03340_gene;locus_tag=GCA000153685_03340
contig_1	Pyrodigal	CDS	3549694	3549903	.	+	0	ID=GCA000153685_03340;Name=Conserved protein;locus_tag=GCA000153685_03340;product=Conserved protein;Parent=GCA000153685_03340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416778.1,SO:0001217,UniParc:UPI00000D2D58,UniRef:UniRef100_I6XGJ1,UniRef:UniRef50_I6XGJ1,UniRef:UniRef90_I6XGJ1
contig_1	Pyrodigal	gene	3549938	3550123	.	+	.	ID=GCA000153685_03341_gene;locus_tag=GCA000153685_03341
contig_1	Pyrodigal	CDS	3549938	3550123	.	+	0	ID=GCA000153685_03341;Name=hypothetical protein;locus_tag=GCA000153685_03341;product=hypothetical protein;Parent=GCA000153685_03341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908177.1,SO:0001217,UniParc:UPI00000D2D59,UniRef:UniRef100_A0A0H3LL23,UniRef:UniRef50_A0A0H3LL23,UniRef:UniRef90_A0A0H3LL23
contig_1	Pyrodigal	gene	3550150	3551334	.	-	.	ID=GCA000153685_03342_gene;locus_tag=GCA000153685_03342
contig_1	Pyrodigal	CDS	3550150	3551334	.	-	0	ID=GCA000153685_03342;Name=IS30 family transposase;locus_tag=GCA000153685_03342;product=IS30 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_03342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917752.1,SO:0001217,UniParc:UPI00015456FE,UniRef:UniRef100_A0A0H3LDW4,UniRef:UniRef50_F4CJX3,UniRef:UniRef90_A5U7K7
contig_1	tRNAscan-SE	gene	3552206	3552282	.	-	.	ID=GCA000153685_03343_gene;locus_tag=GCA000153685_03343;gene=trnfM
contig_1	tRNAscan-SE	tRNA	3552206	3552282	.	-	.	ID=GCA000153685_03343;Name=tRNA-fMet(cat);locus_tag=GCA000153685_03343;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000153685_03343_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Pyrodigal	gene	3552399	3552863	.	+	.	ID=GCA000153685_03344_gene;locus_tag=GCA000153685_03344
contig_1	Pyrodigal	CDS	3552399	3552863	.	+	0	ID=GCA000153685_03344;Name=Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases;locus_tag=GCA000153685_03344;product=Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases;Parent=GCA000153685_03344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913440.1,SO:0001217,UniParc:UPI00000CCB6A,UniRef:UniRef100_A0A1R3Y3D0,UniRef:UniRef50_A0A655J4V9,UniRef:UniRef90_A0A1R3Y3D0
contig_1	Pyrodigal	gene	3552894	3553049	.	+	.	ID=GCA000153685_03345_gene;locus_tag=GCA000153685_03345
contig_1	Pyrodigal	CDS	3552894	3553049	.	+	0	ID=GCA000153685_03345;Name=hypothetical protein;locus_tag=GCA000153685_03345;product=hypothetical protein;Parent=GCA000153685_03345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42AA,UniRef:UniRef100_A0A0E7Z698,UniRef:UniRef50_R4MCN5,UniRef:UniRef90_A0A0H3LF55
contig_1	Pyrodigal	gene	3553033	3556011	.	-	.	ID=GCA000153685_03346_gene;locus_tag=GCA000153685_03346
contig_1	Pyrodigal	CDS	3553033	3556011	.	-	0	ID=GCA000153685_03346;Name=UPF0182 protein MRA_3227;locus_tag=GCA000153685_03346;product=UPF0182 protein MRA_3227;Dbxref=GO:0005576,GO:0005886;Parent=GCA000153685_03346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09118,RefSeq:WP_003899961.1,SO:0001217,UniParc:UPI000013C1B5,UniRef:UniRef100_P9WFL3,UniRef:UniRef50_P9WFL3,UniRef:UniRef90_P9WFL3
contig_1	Pyrodigal	gene	3556103	3557101	.	-	.	ID=GCA000153685_03347_gene;locus_tag=GCA000153685_03347
contig_1	Pyrodigal	CDS	3556103	3557101	.	-	0	ID=GCA000153685_03347;Name=endopeptidase La;locus_tag=GCA000153685_03347;product=endopeptidase La;Parent=GCA000153685_03347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016518A,UniRef:UniRef100_O53340,UniRef:UniRef50_A0A7I7XD95,UniRef:UniRef90_O53340
contig_1	Pyrodigal	gene	3557221	3558621	.	+	.	ID=GCA000153685_03348_gene;locus_tag=GCA000153685_03348
contig_1	Pyrodigal	CDS	3557221	3558621	.	+	0	ID=GCA000153685_03348;Name=Hydrolase;locus_tag=GCA000153685_03348;product=Hydrolase;Parent=GCA000153685_03348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E6231E,UniRef:UniRef100_O53341,UniRef:UniRef50_A0A0K2YLF0,UniRef:UniRef90_O53341
contig_1	Pyrodigal	gene	3558702	3559526	.	+	.	ID=GCA000153685_03349_gene;locus_tag=GCA000153685_03349
contig_1	Pyrodigal	CDS	3558702	3559526	.	+	0	ID=GCA000153685_03349;Name=Cyclodehydratase;locus_tag=GCA000153685_03349;product=Cyclodehydratase;Parent=GCA000153685_03349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61FA2,UniRef:UniRef100_O53342,UniRef:UniRef50_A0A7I7PG30,UniRef:UniRef90_O53342
contig_1	Pyrodigal	gene	3559535	3559708	.	-	.	ID=GCA000153685_03350_gene;locus_tag=GCA000153685_03350
contig_1	Pyrodigal	CDS	3559535	3559708	.	-	0	ID=GCA000153685_03350;Name=hypothetical protein;locus_tag=GCA000153685_03350;product=hypothetical protein;Parent=GCA000153685_03350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456486.1,SO:0001217,UniParc:UPI000252D34B,UniRef:UniRef100_L7N668,UniRef:UniRef50_A0A7I7P814,UniRef:UniRef90_L7N668
contig_1	Pyrodigal	gene	3559863	3561206	.	+	.	ID=GCA000153685_03351_gene;locus_tag=GCA000153685_03351
contig_1	Pyrodigal	CDS	3559863	3561206	.	+	0	ID=GCA000153685_03351;Name=ABC transporter ATP-binding protein;locus_tag=GCA000153685_03351;product=ABC transporter ATP-binding protein;Parent=GCA000153685_03351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416815.1,SO:0001217,UniParc:UPI00000D3AE0,UniRef:UniRef100_A5U7L5,UniRef:UniRef50_A0A975MWS4,UniRef:UniRef90_A5U7L5
contig_1	Pyrodigal	gene	3561240	3561530	.	-	.	ID=GCA000153685_03352_gene;locus_tag=GCA000153685_03352;gene=whiB7
contig_1	Pyrodigal	CDS	3561240	3561530	.	-	0	ID=GCA000153685_03352;Name=transcriptional regulator WhiB7;locus_tag=GCA000153685_03352;product=transcriptional regulator WhiB7;Dbxref=GO:0003677,GO:0005737,GO:0035731,GO:0045454,GO:0045892,GO:0046872,GO:0047134,GO:0051539;gene=whiB7;Parent=GCA000153685_03352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003893333,BlastRules:WP_003899963,KEGG:K18958,SO:0001217,UniParc:UPI00000D2D5E,UniRef:UniRef100_A0A0E7Z643,UniRef:UniRef50_Q6MX01,UniRef:UniRef90_Q6MX01
contig_1	Pyrodigal	gene	3561674	3561796	.	-	.	ID=GCA000153685_03353_gene;locus_tag=GCA000153685_03353
contig_1	Pyrodigal	CDS	3561674	3561796	.	-	0	ID=GCA000153685_03353;Name=hypothetical protein;locus_tag=GCA000153685_03353;product=hypothetical protein;Parent=GCA000153685_03353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D5F,UniRef:UniRef100_Q8VJ52,UniRef:UniRef50_Q8VJ52,UniRef:UniRef90_Q8VJ52
contig_1	Pyrodigal	gene	3561948	3564059	.	-	.	ID=GCA000153685_03354_gene;locus_tag=GCA000153685_03354;gene=uvrD2
contig_1	Pyrodigal	CDS	3561948	3564059	.	-	0	ID=GCA000153685_03354;Name=ATP-dependent DNA helicase UvrD2;locus_tag=GCA000153685_03354;product=ATP-dependent DNA helicase UvrD2;Dbxref=GO:0000287,GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005829,GO:0008094,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0043138,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=uvrD2;Parent=GCA000153685_03354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416822,SO:0001217,UniParc:UPI0000F517CF,UniRef:UniRef100_P9WMP9,UniRef:UniRef50_P9WMP9,UniRef:UniRef90_P9WMP9;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	3564174	3564428	.	+	.	ID=GCA000153685_03355_gene;locus_tag=GCA000153685_03355;gene=mrx1
contig_1	Pyrodigal	CDS	3564174	3564428	.	+	0	ID=GCA000153685_03355;Name=mycoredoxin Mrx1;locus_tag=GCA000153685_03355;product=mycoredoxin Mrx1;Dbxref=GO:0009055,GO:0016491,GO:0045454;gene=mrx1;Parent=GCA000153685_03355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416827,RefSeq:WP_003416827.1,SO:0001217,UniParc:UPI00000D2D60,UniRef:UniRef100_P9WN17,UniRef:UniRef50_P9WN17,UniRef:UniRef90_P9WN17;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3564441	3565382	.	-	.	ID=GCA000153685_03356_gene;locus_tag=GCA000153685_03356;gene=nudC
contig_1	Pyrodigal	CDS	3564441	3565382	.	-	0	ID=GCA000153685_03356;Name=NAD(+) diphosphatase;locus_tag=GCA000153685_03356;product=NAD(+) diphosphatase;Dbxref=GO:0000210,GO:0000287,GO:0005829,GO:0006734,GO:0006742,GO:0016787,GO:0019677,GO:0030145,GO:0035529,GO:0110153;gene=nudC;Parent=GCA000153685_03356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03426,RefSeq:WP_003899965.1,SO:0001217,UniParc:UPI00001308EB,UniRef:UniRef100_P9WIX5,UniRef:UniRef50_P9WIX5,UniRef:UniRef90_P9WIX5;ec_number=3.6.1.22
contig_1	Pyrodigal	gene	3565441	3566508	.	-	.	ID=GCA000153685_03357_gene;locus_tag=GCA000153685_03357
contig_1	Pyrodigal	CDS	3565441	3566508	.	-	0	ID=GCA000153685_03357;Name=putative transmembrane cation transporter;locus_tag=GCA000153685_03357;product=putative transmembrane cation transporter;Parent=GCA000153685_03357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03426,RefSeq:WP_003900655.1,SO:0001217,UniParc:UPI0001278048,UniRef:UniRef100_A0A0H3LL39,UniRef:UniRef50_A0AAE3ZFF2,UniRef:UniRef90_O53346;ec_number=3.6.1.22
contig_1	Pyrodigal	gene	3566570	3569875	.	-	.	ID=GCA000153685_03358_gene;locus_tag=GCA000153685_03358;gene=adnB
contig_1	Pyrodigal	CDS	3566570	3569875	.	-	0	ID=GCA000153685_03358;Name=ATP-dependent DNA helicase AdnB;locus_tag=GCA000153685_03358;product=ATP-dependent DNA helicase AdnB;gene=adnB;Parent=GCA000153685_03358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416833,BlastRules:WP_011728029,RefSeq:WP_003416833.1,SO:0001217,UniParc:UPI00000D5E69,UniRef:UniRef100_O53347,UniRef:UniRef50_A0A3P8MCV5,UniRef:UniRef90_O53347
contig_1	Pyrodigal	gene	3569872	3573039	.	-	.	ID=GCA000153685_03359_gene;locus_tag=GCA000153685_03359;gene=adnA
contig_1	Pyrodigal	CDS	3569872	3573039	.	-	0	ID=GCA000153685_03359;Name=ATP-dependent DNA helicase AdnA;locus_tag=GCA000153685_03359;product=ATP-dependent DNA helicase AdnA;gene=adnA;Parent=GCA000153685_03359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899967,BlastRules:WP_011728028,RefSeq:WP_003899967.1,SO:0001217,UniParc:UPI00000D5EDD,UniRef:UniRef100_O53348,UniRef:UniRef50_A0A448IJ70,UniRef:UniRef90_O53348
contig_1	Pyrodigal	gene	3573125	3573334	.	+	.	ID=GCA000153685_03360_gene;locus_tag=GCA000153685_03360
contig_1	Pyrodigal	CDS	3573125	3573334	.	+	0	ID=GCA000153685_03360;Name=putative protein Rv3202A;locus_tag=GCA000153685_03360;product=putative protein Rv3202A;Parent=GCA000153685_03360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003907005.1,SO:0001217,UniParc:UPI00005EE7E6,UniRef:UniRef100_P0DMM3,UniRef:UniRef50_P0DMM3,UniRef:UniRef90_P0DMM3
contig_1	Pyrodigal	gene	3573365	3574150	.	+	.	ID=GCA000153685_03361_gene;locus_tag=GCA000153685_03361;gene=lipV
contig_1	Pyrodigal	CDS	3573365	3574150	.	+	0	ID=GCA000153685_03361;Name=lipase LipV;locus_tag=GCA000153685_03361;product=lipase LipV;Dbxref=GO:0005504,GO:0009062,GO:0016298,GO:0016787,GO:0071468,GO:0106435;gene=lipV;Parent=GCA000153685_03361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899968,RefSeq:WP_003899968.1,SO:0001217,UniParc:UPI00000D2D62,UniRef:UniRef100_L0TC47,UniRef:UniRef50_L0TC47,UniRef:UniRef90_L0TC47;ec_number=3.1.1.1
contig_1	Pyrodigal	gene	3574153	3574458	.	+	.	ID=GCA000153685_03362_gene;locus_tag=GCA000153685_03362
contig_1	Pyrodigal	CDS	3574153	3574458	.	+	0	ID=GCA000153685_03362;Name=putative DNA-methyltransferase (Modification methylase);locus_tag=GCA000153685_03362;product=putative DNA-methyltransferase (Modification methylase);Parent=GCA000153685_03362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416847.1,SO:0001217,UniParc:UPI000016518C,UniRef:UniRef100_A0A1R3Y3S1,UniRef:UniRef50_A0A0J6WMH1,UniRef:UniRef90_O05862
contig_1	Pyrodigal	gene	3574465	3575343	.	-	.	ID=GCA000153685_03363_gene;locus_tag=GCA000153685_03363
contig_1	Pyrodigal	CDS	3574465	3575343	.	-	0	ID=GCA000153685_03363;Name=TIGR02569 family protein;locus_tag=GCA000153685_03363;product=TIGR02569 family protein;Parent=GCA000153685_03363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899969.1,SO:0001217,UniParc:UPI00000D0FC8,UniRef:UniRef100_O05861,UniRef:UniRef50_R4MIB3,UniRef:UniRef90_R4M6K0
contig_1	Pyrodigal	gene	3575370	3576548	.	-	.	ID=GCA000153685_03364_gene;locus_tag=GCA000153685_03364;gene=moeZ
contig_1	Pyrodigal	CDS	3575370	3576548	.	-	0	ID=GCA000153685_03364;Name=adenylyltransferase/sulfurtransferase MoeZ;locus_tag=GCA000153685_03364;product=adenylyltransferase/sulfurtransferase MoeZ;Dbxref=GO:0004792,GO:0005524,GO:0005737,GO:0005829,GO:0006535,GO:0008146,GO:0008641,GO:0009274,GO:0016020,GO:0016779,GO:0016782,GO:0019344,GO:0042783;gene=moeZ;Parent=GCA000153685_03364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_003416855.1,SO:0001217,UniParc:UPI00000D5E19,UniRef:UniRef100_P9WMN7,UniRef:UniRef50_P9WMN7,UniRef:UniRef90_P9WMN7
contig_1	Pyrodigal	gene	3576639	3577625	.	-	.	ID=GCA000153685_03365_gene;locus_tag=GCA000153685_03365
contig_1	Pyrodigal	CDS	3576639	3577625	.	-	0	ID=GCA000153685_03365;Name=Peptidase metallopeptidase domain-containing protein;locus_tag=GCA000153685_03365;product=Peptidase metallopeptidase domain-containing protein;Parent=GCA000153685_03365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900656.1,SO:0001217,UniParc:UPI00005EE7EA,UniRef:UniRef100_A0A0H3LIE4,UniRef:UniRef50_A0A0T1W6I6,UniRef:UniRef90_A0A829C423
contig_1	Pyrodigal	gene	3577842	3578528	.	+	.	ID=GCA000153685_03366_gene;locus_tag=GCA000153685_03366;gene=fasR
contig_1	Pyrodigal	CDS	3577842	3578528	.	+	0	ID=GCA000153685_03366;Name=HTH-type transcriptional activator FasR;locus_tag=GCA000153685_03366;product=HTH-type transcriptional activator FasR;Dbxref=GO:0000976,GO:0003700,GO:0005886,GO:0006355;gene=fasR;Parent=GCA000153685_03366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416861.1,SO:0001217,UniParc:UPI00000D6027,UniRef:UniRef100_O05858,UniRef:UniRef50_O05858,UniRef:UniRef90_O05858
contig_1	Pyrodigal	gene	3578515	3578802	.	-	.	ID=GCA000153685_03367_gene;locus_tag=GCA000153685_03367
contig_1	Pyrodigal	CDS	3578515	3578802	.	-	0	ID=GCA000153685_03367;Name=ATP-binding protein;locus_tag=GCA000153685_03367;product=ATP-binding protein;Parent=GCA000153685_03367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7EB,UniRef:UniRef100_Q8VJ48,UniRef:UniRef50_A0A7I7NI81,UniRef:UniRef90_Q8VJ48
contig_1	Pyrodigal	gene	3578994	3579356	.	-	.	ID=GCA000153685_03368_gene;locus_tag=GCA000153685_03368
contig_1	Pyrodigal	CDS	3578994	3579356	.	-	0	ID=GCA000153685_03368;Name=Helicase;locus_tag=GCA000153685_03368;product=Helicase;Parent=GCA000153685_03368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7EC,UniRef:UniRef100_A0A0E8UUK9,UniRef:UniRef50_A0A9P3USY3,UniRef:UniRef90_A0A0E8UUK9
contig_1	Pyrodigal	gene	3579379	3579672	.	+	.	ID=GCA000153685_03369_gene;locus_tag=GCA000153685_03369
contig_1	Pyrodigal	CDS	3579379	3579672	.	+	0	ID=GCA000153685_03369;Name=Threonine and proline rich protein;locus_tag=GCA000153685_03369;product=Threonine and proline rich protein;Parent=GCA000153685_03369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE7ED,UniRef:UniRef100_A0A0H3LE29,UniRef:UniRef50_A0A1A3CMB9,UniRef:UniRef90_A0A0H3LE29
contig_1	Pyrodigal	gene	3579682	3580377	.	-	.	ID=GCA000153685_03370_gene;locus_tag=GCA000153685_03370
contig_1	Pyrodigal	CDS	3579682	3580377	.	-	0	ID=GCA000153685_03370;Name=Hydroxylase;locus_tag=GCA000153685_03370;product=Hydroxylase;Parent=GCA000153685_03370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416873.1,SO:0001217,UniParc:UPI00000D1193,UniRef:UniRef100_O05856,UniRef:UniRef50_F5Z137,UniRef:UniRef90_R4M6K5
contig_1	Pyrodigal	gene	3580636	3582219	.	+	.	ID=GCA000153685_03371_gene;locus_tag=GCA000153685_03371
contig_1	Pyrodigal	CDS	3580636	3582219	.	+	0	ID=GCA000153685_03371;Name=RNA helicase;locus_tag=GCA000153685_03371;product=RNA helicase;Parent=GCA000153685_03371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416875.1,SO:0001217,UniParc:UPI00000D5E59,UniRef:UniRef100_O05855,UniRef:UniRef50_O05855,UniRef:UniRef90_O05855
contig_1	Pyrodigal	gene	3582232	3583455	.	+	.	ID=GCA000153685_03372_gene;locus_tag=GCA000153685_03372
contig_1	Pyrodigal	CDS	3582232	3583455	.	+	0	ID=GCA000153685_03372;Name=Alanine valine rich protein;locus_tag=GCA000153685_03372;product=Alanine valine rich protein;Parent=GCA000153685_03372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416876.1,SO:0001217,UniParc:UPI00000D0FCB,UniRef:UniRef100_O05854,UniRef:UniRef50_A0A1A3P5A2,UniRef:UniRef90_R4MMD9
contig_1	Pyrodigal	gene	3583531	3584331	.	-	.	ID=GCA000153685_03373_gene;locus_tag=GCA000153685_03373;gene=parA
contig_1	Pyrodigal	CDS	3583531	3584331	.	-	0	ID=GCA000153685_03373;Name=Sporulation initiation inhibitor protein Soj;locus_tag=GCA000153685_03373;product=Sporulation initiation inhibitor protein Soj;gene=parA;Parent=GCA000153685_03373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1192,COG:DN,KEGG:K03496,RefSeq:WP_003901572.1,SO:0001217,UniParc:UPI000016518D,UniRef:UniRef100_A0A1R3Y3T6,UniRef:UniRef50_O05853,UniRef:UniRef90_A0A2Z5YBI2
contig_1	Pyrodigal	gene	3584485	3585096	.	+	.	ID=GCA000153685_03374_gene;locus_tag=GCA000153685_03374;gene=gpm2
contig_1	Pyrodigal	CDS	3584485	3585096	.	+	0	ID=GCA000153685_03374;Name=acid phosphatase;locus_tag=GCA000153685_03374;product=acid phosphatase;Dbxref=GO:0003993,GO:0006094,GO:0042132,GO:0042803,GO:0070297,GO:0101006;gene=gpm2;Parent=GCA000153685_03374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416878.1,SO:0001217,UniParc:UPI000016534B,UniRef:UniRef100_Q6MWZ7,UniRef:UniRef50_Q6MWZ7,UniRef:UniRef90_Q6MWZ7;ec_number=3.1.3.2
contig_1	Pyrodigal	gene	3585105	3586211	.	+	.	ID=GCA000153685_03375_gene;locus_tag=GCA000153685_03375;gene=menF
contig_1	Pyrodigal	CDS	3585105	3586211	.	+	0	ID=GCA000153685_03375;Name=Putative isochorismate synthase MenF;locus_tag=GCA000153685_03375;product=Putative isochorismate synthase MenF;Dbxref=GO:0008909,GO:0009234,GO:0009697,GO:0046872;gene=menF;Parent=GCA000153685_03375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00030563EF,UniRef:UniRef100_A0A0E8UKA7,UniRef:UniRef50_P9WFW9,UniRef:UniRef90_P9WFW9;ec_number=5.4.4.2
contig_1	Pyrodigal	gene	3586401	3586691	.	+	.	ID=GCA000153685_03376_gene;locus_tag=GCA000153685_03376
contig_1	Pyrodigal	CDS	3586401	3586691	.	+	0	ID=GCA000153685_03376;Name=Acetyltransferase;locus_tag=GCA000153685_03376;product=Acetyltransferase;Parent=GCA000153685_03376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A38D,UniRef:UniRef100_A5U7N8,UniRef:UniRef50_A0A4R8S268,UniRef:UniRef90_A5U7N8
contig_1	Pyrodigal	gene	3586643	3587050	.	-	.	ID=GCA000153685_03377_gene;locus_tag=GCA000153685_03377
contig_1	Pyrodigal	CDS	3586643	3587050	.	-	0	ID=GCA000153685_03377;Name=Conserved integral membrane protein;locus_tag=GCA000153685_03377;product=Conserved integral membrane protein;Parent=GCA000153685_03377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F643E,UniRef:UniRef100_A0A0H3LL61,UniRef:UniRef50_A0A1A3CH38,UniRef:UniRef90_A5U7N9
contig_1	Pyrodigal	gene	3587032	3587133	.	-	.	ID=GCA000153685_03378_gene;locus_tag=GCA000153685_03378
contig_1	Pyrodigal	CDS	3587032	3587133	.	-	0	ID=GCA000153685_03378;Name=hypothetical protein;locus_tag=GCA000153685_03378;product=hypothetical protein;Parent=GCA000153685_03378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A3C3,UniRef:UniRef100_A0A0E8U253,UniRef:UniRef50_A0A0E8U253,UniRef:UniRef90_A0A0E8U253
contig_1	Pyrodigal	gene	3587307	3588272	.	+	.	ID=GCA000153685_03379_gene;locus_tag=GCA000153685_03379
contig_1	Pyrodigal	CDS	3587307	3588272	.	+	0	ID=GCA000153685_03379;Name=Conserved protein;locus_tag=GCA000153685_03379;product=Conserved protein;Parent=GCA000153685_03379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416883.1,SO:0001217,UniParc:UPI00000D5E3A,UniRef:UniRef100_O05848,UniRef:UniRef50_B2HEU1,UniRef:UniRef90_O05848
contig_1	Pyrodigal	gene	3588552	3588806	.	+	.	ID=GCA000153685_03380_gene;locus_tag=GCA000153685_03380;gene=whiB1
contig_1	Pyrodigal	CDS	3588552	3588806	.	+	0	ID=GCA000153685_03380;Name=transcriptional regulator WhiB1;locus_tag=GCA000153685_03380;product=transcriptional regulator WhiB1;Dbxref=GO:0003677,GO:0005737,GO:0015035,GO:0035731,GO:0045454,GO:0045892,GO:0046872,GO:0047134,GO:0051539,GO:0071731;gene=whiB1;Parent=GCA000153685_03380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416884,KEGG:K18955,RefSeq:WP_003416884.1,SO:0001217,UniParc:UPI0000050C2C,UniRef:UniRef100_P9WF43,UniRef:UniRef50_P9WF43,UniRef:UniRef90_P9WF43
contig_1	Pyrodigal	gene	3588868	3590373	.	-	.	ID=GCA000153685_03381_gene;locus_tag=GCA000153685_03381;gene=pdtaS
contig_1	Pyrodigal	CDS	3588868	3590373	.	-	0	ID=GCA000153685_03381;Name=Sensor histidine kinase PdtaS;locus_tag=GCA000153685_03381;product=Sensor histidine kinase PdtaS;Dbxref=GO:0000155,GO:0000160,GO:0004672,GO:0005524,GO:0005737;gene=pdtaS;Parent=GCA000153685_03381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416886.1,SO:0001217,UniParc:UPI00000D6015,UniRef:UniRef100_P9WGL5,UniRef:UniRef50_P9WGL5,UniRef:UniRef90_P9WGL5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3590390	3590629	.	-	.	ID=GCA000153685_03382_gene;locus_tag=GCA000153685_03382
contig_1	Pyrodigal	CDS	3590390	3590629	.	-	0	ID=GCA000153685_03382;Name=biotin/lipoyl-binding carrier protein;locus_tag=GCA000153685_03382;product=biotin/lipoyl-binding carrier protein;Parent=GCA000153685_03382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016518E,UniRef:UniRef100_P9WPQ1,UniRef:UniRef50_P9WPQ1,UniRef:UniRef90_P9WPQ1
contig_1	Bakta	gene	3590791	3590880	.	+	.	ID=GCA000153685_03383_gene;locus_tag=GCA000153685_03383;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	3590791	3590880	.	+	0	ID=GCA000153685_03383;Name=30S ribosomal protein THX;locus_tag=GCA000153685_03383;product=30S ribosomal protein THX;Parent=GCA000153685_03383_gene;Note=SO:0001217,UniParc:UPI0001E62CAA,UniRef:UniRef100_A0A0U0UFA0,UniRef:UniRef50_G8RJY0,UniRef:UniRef90_A0A0U0UFA0
contig_1	Pyrodigal	gene	3590890	3591195	.	-	.	ID=GCA000153685_03384_gene;locus_tag=GCA000153685_03384;gene=rsrA
contig_1	Pyrodigal	CDS	3590890	3591195	.	-	0	ID=GCA000153685_03384;Name=mycothiol system anti-sigma-R factor;locus_tag=GCA000153685_03384;product=mycothiol system anti-sigma-R factor;Dbxref=GO:0006979,GO:0009408,GO:0016989,GO:0045454,GO:0046872,GO:0051536;gene=rsrA;Parent=GCA000153685_03384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416891.1,SO:0001217,UniParc:UPI00000D2D65,UniRef:UniRef100_P9WJ69,UniRef:UniRef50_P9WJ69,UniRef:UniRef90_P9WJ69
contig_1	Pyrodigal	gene	3591192	3591743	.	-	.	ID=GCA000153685_03385_gene;locus_tag=GCA000153685_03385
contig_1	Pyrodigal	CDS	3591192	3591743	.	-	0	ID=GCA000153685_03385;Name=hypothetical protein;locus_tag=GCA000153685_03385;product=hypothetical protein;Parent=GCA000153685_03385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899976.1,SO:0001217,UniParc:UPI00000D1038,UniRef:UniRef100_O05844,UniRef:UniRef50_O05844,UniRef:UniRef90_O05844
contig_1	Pyrodigal	gene	3591740	3592507	.	-	.	ID=GCA000153685_03386_gene;locus_tag=GCA000153685_03386;gene=sigH
contig_1	Pyrodigal	CDS	3591740	3592507	.	-	0	ID=GCA000153685_03386;Name=ECF RNA polymerase sigma factor SigH;locus_tag=GCA000153685_03386;product=ECF RNA polymerase sigma factor SigH;Dbxref=GO:0003677,GO:0006352,GO:0006355,GO:0006979,GO:0009274,GO:0009408,GO:0016987,GO:0034605,GO:0051409;gene=sigH;Parent=GCA000153685_03386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EF47F4,UniRef:UniRef100_P9WGH9,UniRef:UniRef50_P9WGH9,UniRef:UniRef90_P9WGH9
contig_1	Pyrodigal	gene	3592690	3593538	.	+	.	ID=GCA000153685_03387_gene;locus_tag=GCA000153685_03387
contig_1	Pyrodigal	CDS	3592690	3593538	.	+	0	ID=GCA000153685_03387;Name=putative iron-regulated short-chain dehydrogenase/reductase;locus_tag=GCA000153685_03387;product=putative iron-regulated short-chain dehydrogenase/reductase;Parent=GCA000153685_03387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416899.1,SO:0001217,UniParc:UPI00000D5FCB,UniRef:UniRef100_O05842,UniRef:UniRef50_O05842,UniRef:UniRef90_O05842
contig_1	Pyrodigal	gene	3593634	3593861	.	-	.	ID=GCA000153685_03388_gene;locus_tag=GCA000153685_03388
contig_1	Pyrodigal	CDS	3593634	3593861	.	-	0	ID=GCA000153685_03388;Name=hypothetical protein;locus_tag=GCA000153685_03388;product=hypothetical protein;Parent=GCA000153685_03388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D66,UniRef:UniRef100_A5U7P8,UniRef:UniRef50_A5U7P8,UniRef:UniRef90_A5U7P8
contig_1	Pyrodigal	gene	3593855	3595279	.	-	.	ID=GCA000153685_03389_gene;locus_tag=GCA000153685_03389
contig_1	Pyrodigal	CDS	3593855	3595279	.	-	0	ID=GCA000153685_03389;Name=Bifunctional AAC/APH;locus_tag=GCA000153685_03389;product=Bifunctional AAC/APH;Parent=GCA000153685_03389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899979.1,SO:0001217,UniParc:UPI00000D5ECD,UniRef:UniRef100_O05841,UniRef:UniRef50_O05841,UniRef:UniRef90_O05841
contig_1	Pyrodigal	gene	3595403	3596161	.	-	.	ID=GCA000153685_03390_gene;locus_tag=GCA000153685_03390
contig_1	Pyrodigal	CDS	3595403	3596161	.	-	0	ID=GCA000153685_03390;Name=Abasic site processing protein;locus_tag=GCA000153685_03390;product=Abasic site processing protein;Parent=GCA000153685_03390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416907.1,SO:0001217,UniParc:UPI00000D101D,UniRef:UniRef100_O05872,UniRef:UniRef50_M3VDT2,UniRef:UniRef90_A0A0U0RQU8
contig_1	Pyrodigal	gene	3596216	3597568	.	+	.	ID=GCA000153685_03391_gene;locus_tag=GCA000153685_03391;gene=aroA
contig_1	Pyrodigal	CDS	3596216	3597568	.	+	0	ID=GCA000153685_03391;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000153685_03391;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000153685_03391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416914.1,SO:0001217,UniParc:UPI0000125F45,UniRef:UniRef100_P9WPY5,UniRef:UniRef50_P9WPY5,UniRef:UniRef90_P9WPY5;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	3597565	3598557	.	+	.	ID=GCA000153685_03392_gene;locus_tag=GCA000153685_03392;gene=rsgA
contig_1	Pyrodigal	CDS	3597565	3598557	.	+	0	ID=GCA000153685_03392;Name=ribosome small subunit-dependent GTPase A;locus_tag=GCA000153685_03392;product=ribosome small subunit-dependent GTPase A;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0043022;gene=rsgA;Parent=GCA000153685_03392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06949,RefSeq:WP_003416916.1,SO:0001217,UniParc:UPI00000322B5,UniRef:UniRef100_O05873,UniRef:UniRef50_F5XKP1,UniRef:UniRef90_O05873;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	3598590	3599873	.	-	.	ID=GCA000153685_03393_gene;locus_tag=GCA000153685_03393;gene=desA3
contig_1	Pyrodigal	CDS	3598590	3599873	.	-	0	ID=GCA000153685_03393;Name=NADPH-dependent stearoyl-CoA 9-desaturase;locus_tag=GCA000153685_03393;product=NADPH-dependent stearoyl-CoA 9-desaturase;Dbxref=GO:0005886,GO:0006629,GO:0016213,GO:0016717,GO:0042759,GO:0046872;gene=desA3;Parent=GCA000153685_03393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416919,KEGG:K22769,RefSeq:WP_003416919.1,SO:0001217,UniParc:UPI00000D5EE3,UniRef:UniRef100_P9WNZ3,UniRef:UniRef50_P9WNZ3,UniRef:UniRef90_P9WNZ3;ec_number=1.14.19.n4
contig_1	Pyrodigal	gene	3599951	3601093	.	-	.	ID=GCA000153685_03394_gene;locus_tag=GCA000153685_03394
contig_1	Pyrodigal	CDS	3599951	3601093	.	-	0	ID=GCA000153685_03394;Name=NADPH oxidoreductase;locus_tag=GCA000153685_03394;product=NADPH oxidoreductase;Dbxref=GO:0005886,GO:0006631,GO:0009055,GO:0016491,GO:0022900,GO:0046872,GO:0051537,GO:0070402;Parent=GCA000153685_03394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003416922,KEGG:K22770,RefSeq:WP_003416922.1,SO:0001217,UniParc:UPI00000D5E45,UniRef:UniRef100_P9WNE9,UniRef:UniRef50_P9WNE9,UniRef:UniRef90_P9WNE9;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3601203	3601712	.	-	.	ID=GCA000153685_03395_gene;locus_tag=GCA000153685_03395
contig_1	Pyrodigal	CDS	3601203	3601712	.	-	0	ID=GCA000153685_03395;Name=Conserved protein;locus_tag=GCA000153685_03395;product=Conserved protein;Parent=GCA000153685_03395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416925.1,SO:0001217,UniParc:UPI00000D119C,UniRef:UniRef100_O05876,UniRef:UniRef50_A0A4R5AM32,UniRef:UniRef90_O05876
contig_1	Pyrodigal	gene	3601709	3602575	.	-	.	ID=GCA000153685_03396_gene;locus_tag=GCA000153685_03396;gene=ppk2
contig_1	Pyrodigal	CDS	3601709	3602575	.	-	0	ID=GCA000153685_03396;Name=polyphosphate kinase 2;locus_tag=GCA000153685_03396;product=polyphosphate kinase 2;Dbxref=GO:0005525,GO:0005886,GO:0006183,GO:0006793,GO:0008976;gene=ppk2;Parent=GCA000153685_03396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938021.1,SO:0001217,UniParc:UPI00005EE7F6,UniRef:UniRef100_A0A0E7X507,UniRef:UniRef50_O05877,UniRef:UniRef90_O05877;ec_number=2.7.4.1
contig_1	Pyrodigal	gene	3602620	3603222	.	-	.	ID=GCA000153685_03397_gene;locus_tag=GCA000153685_03397
contig_1	Pyrodigal	CDS	3602620	3603222	.	-	0	ID=GCA000153685_03397;Name=putative triacylglycerol synthase (Diacylglycerol acyltransferase);locus_tag=GCA000153685_03397;product=putative triacylglycerol synthase (Diacylglycerol acyltransferase);Parent=GCA000153685_03397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCAE6,UniRef:UniRef100_Q7D5V7,UniRef:UniRef50_X7YJH3,UniRef:UniRef90_O05878
contig_1	Pyrodigal	gene	3603213	3604028	.	-	.	ID=GCA000153685_03398_gene;locus_tag=GCA000153685_03398;gene=tgs3
contig_1	Pyrodigal	CDS	3603213	3604028	.	-	0	ID=GCA000153685_03398;Name=putative diacyglycerol O-acyltransferase tgs3;locus_tag=GCA000153685_03398;product=putative diacyglycerol O-acyltransferase tgs3;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0045017,GO:0051701,GO:0071731;gene=tgs3;Parent=GCA000153685_03398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899981.1,SO:0001217,UniParc:UPI000013C1F4,UniRef:UniRef100_P9WKC5,UniRef:UniRef50_P9WKC5,UniRef:UniRef90_P9WKC5;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3604229	3604780	.	+	.	ID=GCA000153685_03399_gene;locus_tag=GCA000153685_03399
contig_1	Pyrodigal	CDS	3604229	3604780	.	+	0	ID=GCA000153685_03399;Name=Alanine%2C arginine and proline rich protein;locus_tag=GCA000153685_03399;product=Alanine%2C arginine and proline rich protein;Parent=GCA000153685_03399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912151.1,SO:0001217,UniParc:UPI0001E61FAA,UniRef:UniRef100_A0A0H3LIH6,UniRef:UniRef50_A0A1A3DLT4,UniRef:UniRef90_A0A9P2HB87
contig_1	Pyrodigal	gene	3604798	3605955	.	-	.	ID=GCA000153685_03400_gene;locus_tag=GCA000153685_03400
contig_1	Pyrodigal	CDS	3604798	3605955	.	-	0	ID=GCA000153685_03400;Name=Transporter;locus_tag=GCA000153685_03400;product=Transporter;Parent=GCA000153685_03400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26732,RefSeq:WP_003416933.1,SO:0001217,UniParc:UPI00000D5FB3,UniRef:UniRef100_A5U7R0,UniRef:UniRef50_R4MBD9,UniRef:UniRef90_A0A655AKT1
contig_1	Pyrodigal	gene	3605960	3606442	.	-	.	ID=GCA000153685_03401_gene;locus_tag=GCA000153685_03401
contig_1	Pyrodigal	CDS	3605960	3606442	.	-	0	ID=GCA000153685_03401;Name=Conserved protein;locus_tag=GCA000153685_03401;product=Conserved protein;Parent=GCA000153685_03401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899982.1,SO:0001217,UniParc:UPI00000D113D,UniRef:UniRef100_O05882,UniRef:UniRef50_O05882,UniRef:UniRef90_O05882
contig_1	Pyrodigal	gene	3606503	3607237	.	-	.	ID=GCA000153685_03402_gene;locus_tag=GCA000153685_03402;gene=mddA
contig_1	Pyrodigal	CDS	3606503	3607237	.	-	0	ID=GCA000153685_03402;Name=methanethiol S-methyltransferase;locus_tag=GCA000153685_03402;product=methanethiol S-methyltransferase;Dbxref=GO:0008168,GO:0016020,GO:0032259;gene=mddA;Parent=GCA000153685_03402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21310,RefSeq:WP_003416945.1,SO:0001217,UniParc:UPI00000D0FD6,UniRef:UniRef100_O05883,UniRef:UniRef50_O05883,UniRef:UniRef90_O05883;ec_number=2.1.1.334
contig_1	Pyrodigal	gene	3607296	3610502	.	-	.	ID=GCA000153685_03403_gene;locus_tag=GCA000153685_03403
contig_1	Pyrodigal	CDS	3607296	3610502	.	-	0	ID=GCA000153685_03403;Name=Integral membrane transport protein;locus_tag=GCA000153685_03403;product=Integral membrane transport protein;Parent=GCA000153685_03403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61FAC,UniRef:UniRef100_A5U7R3,UniRef:UniRef50_A0A0I9Z0Z6,UniRef:UniRef90_A5U7R3
contig_1	Pyrodigal	gene	3610521	3613418	.	-	.	ID=GCA000153685_03404_gene;locus_tag=GCA000153685_03404;gene=secA
contig_1	Pyrodigal	CDS	3610521	3613418	.	-	0	ID=GCA000153685_03404;Name=preprotein translocase subunit SecA;locus_tag=GCA000153685_03404;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0006886,GO:0008564,GO:0017038,GO:0031522,GO:0043952,GO:0065002;gene=secA;Parent=GCA000153685_03404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,KEGG:K03070,SO:0001217,UniParc:UPI0000EF4800,UniRef:UniRef100_A0A0T9KKZ8,UniRef:UniRef50_P9WGP5,UniRef:UniRef90_P9WGP5;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	3613449	3614108	.	-	.	ID=GCA000153685_03405_gene;locus_tag=GCA000153685_03405;gene=hpf
contig_1	Pyrodigal	CDS	3613449	3614108	.	-	0	ID=GCA000153685_03405;Name=ribosome hibernation-promoting factor%2C HPF/YfiA family;locus_tag=GCA000153685_03405;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;Dbxref=GO:0005840,GO:0022627,GO:0043024,GO:0045182,GO:0045900;gene=hpf;Parent=GCA000153685_03405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05808,SO:0001217,UniParc:UPI00000D4F2C,UniRef:UniRef100_O05886,UniRef:UniRef50_O05886,UniRef:UniRef90_O05886
contig_1	Pyrodigal	gene	3614409	3615134	.	-	.	ID=GCA000153685_03406_gene;locus_tag=GCA000153685_03406
contig_1	Pyrodigal	CDS	3614409	3615134	.	-	0	ID=GCA000153685_03406;Name=Phosphoribosyltransferase;locus_tag=GCA000153685_03406;product=Phosphoribosyltransferase;Parent=GCA000153685_03406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCAE7,UniRef:UniRef100_Q7D5V1,UniRef:UniRef50_A0A7Z7II30,UniRef:UniRef90_O05887
contig_1	Pyrodigal	gene	3615088	3615930	.	-	.	ID=GCA000153685_03407_gene;locus_tag=GCA000153685_03407
contig_1	Pyrodigal	CDS	3615088	3615930	.	-	0	ID=GCA000153685_03407;Name=LmeA-like phospholipid-binding;locus_tag=GCA000153685_03407;product=LmeA-like phospholipid-binding;Parent=GCA000153685_03407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003416966.1,SO:0001217,UniParc:UPI000016534F,UniRef:UniRef100_O05888,UniRef:UniRef50_A0A1A3I2U0,UniRef:UniRef90_O05888
contig_1	Pyrodigal	gene	3615998	3617749	.	-	.	ID=GCA000153685_03408_gene;locus_tag=GCA000153685_03408;gene=lpqB
contig_1	Pyrodigal	CDS	3615998	3617749	.	-	0	ID=GCA000153685_03408;Name=MtrAB system accessory lipoprotein LpqB;locus_tag=GCA000153685_03408;product=MtrAB system accessory lipoprotein LpqB;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=lpqB;Parent=GCA000153685_03408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901578.1,SO:0001217,UniParc:UPI0000165350,UniRef:UniRef100_P9WK37,UniRef:UniRef50_A0QTK4,UniRef:UniRef90_P9WK37
contig_1	Pyrodigal	gene	3617749	3619452	.	-	.	ID=GCA000153685_03409_gene;locus_tag=GCA000153685_03409;gene=mtrB
contig_1	Pyrodigal	CDS	3617749	3619452	.	-	0	ID=GCA000153685_03409;Name=two-component system sensor histidine kinase MtrB;locus_tag=GCA000153685_03409;product=two-component system sensor histidine kinase MtrB;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0007165,GO:0016020;gene=mtrB;Parent=GCA000153685_03409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917137,BlastRules:WP_014877234,COG:COG5002,COG:T,RefSeq:WP_003416988.1,SO:0001217,UniParc:UPI0000165190,UniRef:UniRef100_P59963,UniRef:UniRef50_P9WGK9,UniRef:UniRef90_P9WGK9;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	3619502	3620188	.	-	.	ID=GCA000153685_03410_gene;locus_tag=GCA000153685_03410;gene=mtrA
contig_1	Pyrodigal	CDS	3619502	3620188	.	-	0	ID=GCA000153685_03410;Name=two-component system response regulator MtrA;locus_tag=GCA000153685_03410;product=two-component system response regulator MtrA;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0005829,GO:0005886,GO:0006355,GO:0032993,GO:0045893,GO:0046872,GO:0051701;gene=mtrA;Parent=GCA000153685_03410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899985,BlastRules:WP_003975799,COG:COG0745,COG:TK,RefSeq:WP_003899985.1,SO:0001217,UniParc:UPI0000165351,UniRef:UniRef100_P9WGM7,UniRef:UniRef50_P9WGM7,UniRef:UniRef90_P9WGM7
contig_1	Pyrodigal	gene	3620258	3620902	.	-	.	ID=GCA000153685_03411_gene;locus_tag=GCA000153685_03411;gene=tmk
contig_1	Pyrodigal	CDS	3620258	3620902	.	-	0	ID=GCA000153685_03411;Name=dTMP kinase;locus_tag=GCA000153685_03411;product=dTMP kinase;Dbxref=GO:0000287,GO:0004798,GO:0005524,GO:0005525,GO:0005737,GO:0005829,GO:0006227,GO:0006233,GO:0006235,GO:0042803,GO:0046044;gene=tmk;Parent=GCA000153685_03411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00943,RefSeq:WP_003417036.1,SO:0001217,UniParc:UPI00000D6025,UniRef:UniRef100_P9WKE1,UniRef:UniRef50_P9WKE1,UniRef:UniRef90_P9WKE1;ec_number=2.7.4.9
contig_1	Pyrodigal	gene	3620999	3622486	.	-	.	ID=GCA000153685_03412_gene;locus_tag=GCA000153685_03412;gene=ahcY
contig_1	Pyrodigal	CDS	3620999	3622486	.	-	0	ID=GCA000153685_03412;Name=adenosylhomocysteinase;locus_tag=GCA000153685_03412;product=adenosylhomocysteinase;Dbxref=GO:0004013,GO:0005829,GO:0006730,GO:0033353,GO:0071269;gene=ahcY;Parent=GCA000153685_03412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0499,COG:H,KEGG:K01251,RefSeq:WP_003417039.1,SO:0001217,UniParc:UPI0000033267,UniRef:UniRef100_P9WGV3,UniRef:UniRef50_P9WGV3,UniRef:UniRef90_P9WGV3;ec_number=3.13.2.1
contig_1	Pyrodigal	gene	3622591	3623226	.	-	.	ID=GCA000153685_03413_gene;locus_tag=GCA000153685_03413;gene=alkX
contig_1	Pyrodigal	CDS	3622591	3623226	.	-	0	ID=GCA000153685_03413;Name=HTH-type transcriptional regulator AlkX;locus_tag=GCA000153685_03413;product=HTH-type transcriptional regulator AlkX;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355;gene=alkX;Parent=GCA000153685_03413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417042.1,SO:0001217,UniParc:UPI00000C14FA,UniRef:UniRef100_O05892,UniRef:UniRef50_O05892,UniRef:UniRef90_O05892
contig_1	Pyrodigal	gene	3623223	3623405	.	-	.	ID=GCA000153685_03414_gene;locus_tag=GCA000153685_03414;gene=rubB
contig_1	Pyrodigal	CDS	3623223	3623405	.	-	0	ID=GCA000153685_03414;Name=rubredoxin RubB;locus_tag=GCA000153685_03414;product=rubredoxin RubB;gene=rubB;Parent=GCA000153685_03414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417044,RefSeq:WP_003417044.1,SO:0001217,UniParc:UPI00000D119A,UniRef:UniRef100_I6YFL7,UniRef:UniRef50_H6RBQ6,UniRef:UniRef90_I6YFL7
contig_1	Pyrodigal	gene	3623410	3623580	.	-	.	ID=GCA000153685_03415_gene;locus_tag=GCA000153685_03415
contig_1	Pyrodigal	CDS	3623410	3623580	.	-	0	ID=GCA000153685_03415;Name=Rubredoxin;locus_tag=GCA000153685_03415;product=Rubredoxin;Parent=GCA000153685_03415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCAEA,UniRef:UniRef100_O05894,UniRef:UniRef50_A0A1V3XX59,UniRef:UniRef90_O05894
contig_1	Pyrodigal	gene	3623577	3624827	.	-	.	ID=GCA000153685_03416_gene;locus_tag=GCA000153685_03416
contig_1	Pyrodigal	CDS	3623577	3624827	.	-	0	ID=GCA000153685_03416;Name=Alkane 1-monooxygenase;locus_tag=GCA000153685_03416;product=Alkane 1-monooxygenase;Parent=GCA000153685_03416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00496,RefSeq:WP_003417047.1,SO:0001217,UniParc:UPI00000D5F17,UniRef:UniRef100_A5U7S6,UniRef:UniRef50_A0A7Z7N8J2,UniRef:UniRef90_A0A655AAI7;ec_number=1.14.15.3
contig_1	Pyrodigal	gene	3624936	3626423	.	-	.	ID=GCA000153685_03417_gene;locus_tag=GCA000153685_03417
contig_1	Pyrodigal	CDS	3624936	3626423	.	-	0	ID=GCA000153685_03417;Name=putative cationic amino acid transport integral membrane protein;locus_tag=GCA000153685_03417;product=putative cationic amino acid transport integral membrane protein;Parent=GCA000153685_03417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417049.1,SO:0001217,UniParc:UPI00000D5F90,UniRef:UniRef100_O05896,UniRef:UniRef50_A0A0U0WB18,UniRef:UniRef90_O05896
contig_1	Pyrodigal	gene	3626514	3627902	.	+	.	ID=GCA000153685_03418_gene;locus_tag=GCA000153685_03418
contig_1	Pyrodigal	CDS	3626514	3627902	.	+	0	ID=GCA000153685_03418;Name=Protein Rv3254;locus_tag=GCA000153685_03418;product=Protein Rv3254;Dbxref=GO:0005506,GO:0005829,GO:0005886,GO:0009274,GO:0052837;Parent=GCA000153685_03418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417051.1,SO:0001217,UniParc:UPI0000165353,UniRef:UniRef100_A0A1R3Y3K5,UniRef:UniRef50_O05897,UniRef:UniRef90_O05897
contig_1	Pyrodigal	gene	3627880	3629106	.	-	.	ID=GCA000153685_03419_gene;locus_tag=GCA000153685_03419;gene=manA
contig_1	Pyrodigal	CDS	3627880	3629106	.	-	0	ID=GCA000153685_03419;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000153685_03419;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000153685_03419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417054.1,SO:0001217,UniParc:UPI00000D100E,UniRef:UniRef100_O05898,UniRef:UniRef50_O05898,UniRef:UniRef90_O05898;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	3629114	3630154	.	-	.	ID=GCA000153685_03420_gene;locus_tag=GCA000153685_03420;gene=tobH
contig_1	Pyrodigal	CDS	3629114	3630154	.	-	0	ID=GCA000153685_03420;Name=TobH protein;locus_tag=GCA000153685_03420;product=TobH protein;gene=tobH;Parent=GCA000153685_03420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417056.1,SO:0001217,UniParc:UPI00000D10A4,UniRef:UniRef100_O05899,UniRef:UniRef50_B2HEN7,UniRef:UniRef90_R4MA85
contig_1	Pyrodigal	gene	3630151	3631548	.	-	.	ID=GCA000153685_03421_gene;locus_tag=GCA000153685_03421
contig_1	Pyrodigal	CDS	3630151	3631548	.	-	0	ID=GCA000153685_03421;Name=phosphomannomutase/phosphoglucomutase;locus_tag=GCA000153685_03421;product=phosphomannomutase/phosphoglucomutase;Dbxref=GO:0005975,GO:0016868;Parent=GCA000153685_03421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899989.1,SO:0001217,UniParc:UPI00000D1010,UniRef:UniRef100_A5U7T1,UniRef:UniRef50_E3H506,UniRef:UniRef90_A0A045IAN0
contig_1	Pyrodigal	gene	3631650	3632141	.	-	.	ID=GCA000153685_03422_gene;locus_tag=GCA000153685_03422
contig_1	Pyrodigal	CDS	3631650	3632141	.	-	0	ID=GCA000153685_03422;Name=DUF3499 domain-containing protein;locus_tag=GCA000153685_03422;product=DUF3499 domain-containing protein;Parent=GCA000153685_03422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417073.1,SO:0001217,UniParc:UPI00000D0FC7,UniRef:UniRef100_O53351,UniRef:UniRef50_J4JV33,UniRef:UniRef90_O53351
contig_1	Pyrodigal	gene	3632264	3632683	.	+	.	ID=GCA000153685_03423_gene;locus_tag=GCA000153685_03423
contig_1	Pyrodigal	CDS	3632264	3632683	.	+	0	ID=GCA000153685_03423;Name=Exonuclease;locus_tag=GCA000153685_03423;product=Exonuclease;Parent=GCA000153685_03423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417076.1,SO:0001217,UniParc:UPI0000165354,UniRef:UniRef100_O53352,UniRef:UniRef50_B2HEN4,UniRef:UniRef90_O53352
contig_1	Pyrodigal	gene	3632711	3633082	.	-	.	ID=GCA000153685_03424_gene;locus_tag=GCA000153685_03424;gene=whiB
contig_1	Pyrodigal	CDS	3632711	3633082	.	-	0	ID=GCA000153685_03424;Name=Transcriptional regulator WhiB;locus_tag=GCA000153685_03424;product=Transcriptional regulator WhiB;gene=whiB;Parent=GCA000153685_03424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18955,SO:0001217,UniParc:UPI00000D4F91,UniRef:UniRef100_A0A0H3LFC9,UniRef:UniRef50_A0A7I7QR05,UniRef:UniRef90_A0A0H3LFC9
contig_1	Pyrodigal	gene	3633382	3634377	.	+	.	ID=GCA000153685_03425_gene;locus_tag=GCA000153685_03425;gene=cofD
contig_1	Pyrodigal	CDS	3633382	3634377	.	+	0	ID=GCA000153685_03425;Name=2-phospho-L-lactate transferase;locus_tag=GCA000153685_03425;product=2-phospho-L-lactate transferase;Dbxref=GO:0000287,GO:0043743,GO:0052645,GO:2001121;gene=cofD;Parent=GCA000153685_03425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11212,RefSeq:WP_003417087.1,SO:0001217,UniParc:UPI00000D0FE5,UniRef:UniRef100_P9WP81,UniRef:UniRef50_P9WP81,UniRef:UniRef90_P9WP81;ec_number=2.7.8.28
contig_1	Pyrodigal	gene	3634374	3635720	.	+	.	ID=GCA000153685_03426_gene;locus_tag=GCA000153685_03426;gene=fbiB
contig_1	Pyrodigal	CDS	3634374	3635720	.	+	0	ID=GCA000153685_03426;Name=coenzyme F420-0:L-glutamate ligase;locus_tag=GCA000153685_03426;product=coenzyme F420-0:L-glutamate ligase;Dbxref=GO:0005525,GO:0005886,GO:0043773,GO:0046872,GO:0052618,GO:0052619,GO:0052645,GO:0052890,GO:2001121;gene=fbiB;Parent=GCA000153685_03426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900663.1,SO:0001217,UniParc:UPI00000D5F58,UniRef:UniRef100_P9WP79,UniRef:UniRef50_P9WP79,UniRef:UniRef90_P9WP79;ec_number=6.3.2.31
contig_1	Pyrodigal	gene	3635753	3635866	.	+	.	ID=GCA000153685_03427_gene;locus_tag=GCA000153685_03427
contig_1	Pyrodigal	CDS	3635753	3635866	.	+	0	ID=GCA000153685_03427;Name=hypothetical protein;locus_tag=GCA000153685_03427;product=hypothetical protein;Parent=GCA000153685_03427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A44F,UniRef:UniRef100_A0A0H3LE76,UniRef:UniRef50_A0A0H3LE76,UniRef:UniRef90_A0A0H3LE76
contig_1	Pyrodigal	gene	3636088	3637677	.	+	.	ID=GCA000153685_03428_gene;locus_tag=GCA000153685_03428
contig_1	Pyrodigal	CDS	3636088	3637677	.	+	0	ID=GCA000153685_03428;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000153685_03428;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000153685_03428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE801,UniRef:UniRef100_P96868,UniRef:UniRef50_A0A0U0RHS9,UniRef:UniRef90_P96868
contig_1	Pyrodigal	gene	3637737	3638792	.	-	.	ID=GCA000153685_03429_gene;locus_tag=GCA000153685_03429;gene=manB
contig_1	Pyrodigal	CDS	3637737	3638792	.	-	0	ID=GCA000153685_03429;Name=Mannose-1-phosphate guanylyltransferase;locus_tag=GCA000153685_03429;product=Mannose-1-phosphate guanylyltransferase;Dbxref=GO:0005525,GO:0005737,GO:0009298,GO:0016779,GO:0071555;gene=manB;Parent=GCA000153685_03429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE802,UniRef:UniRef100_A0A0E7X8D3,UniRef:UniRef50_L7N6A5,UniRef:UniRef90_L7N6A5;ec_number=2.7.7.13
contig_1	Pyrodigal	gene	3638818	3639741	.	-	.	ID=GCA000153685_03430_gene;locus_tag=GCA000153685_03430;gene=wbbL
contig_1	Pyrodigal	CDS	3638818	3639741	.	-	0	ID=GCA000153685_03430;Name=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;locus_tag=GCA000153685_03430;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;Dbxref=GO:0005886,GO:0016758,GO:0045226,GO:0102096;gene=wbbL;Parent=GCA000153685_03430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899992,SO:0001217,UniParc:UPI00005EE803,UniRef:UniRef100_P9WMY3,UniRef:UniRef50_P9WMY3,UniRef:UniRef90_P9WMY3;ec_number=2.4.1.289
contig_1	Pyrodigal	gene	3639734	3640648	.	-	.	ID=GCA000153685_03431_gene;locus_tag=GCA000153685_03431;gene=rfbD
contig_1	Pyrodigal	CDS	3639734	3640648	.	-	0	ID=GCA000153685_03431;Name=dTDP-4-dehydrorhamnose reductase;locus_tag=GCA000153685_03431;product=dTDP-4-dehydrorhamnose reductase;Dbxref=GO:0005829,GO:0008831,GO:0009243,GO:0019305,GO:0045226,GO:0046872;gene=rfbD;Parent=GCA000153685_03431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00067,RefSeq:WP_003899993.1,SO:0001217,UniParc:UPI00000D11E0,UniRef:UniRef100_P9WH09,UniRef:UniRef50_P9WH09,UniRef:UniRef90_P9WH09;ec_number=1.1.1.133
contig_1	Pyrodigal	gene	3640727	3642220	.	+	.	ID=GCA000153685_03432_gene;locus_tag=GCA000153685_03432;gene=lcp1
contig_1	Pyrodigal	CDS	3640727	3642220	.	+	0	ID=GCA000153685_03432;Name=phosphotransferase Lcp1;locus_tag=GCA000153685_03432;product=phosphotransferase Lcp1;gene=lcp1;Parent=GCA000153685_03432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417107,KEGG:K27775,RefSeq:WP_003900664.1,SO:0001217,UniParc:UPI0000165192,UniRef:UniRef100_P96872,UniRef:UniRef50_A0A1Z4F1B8,UniRef:UniRef90_P96872
contig_1	Pyrodigal	gene	3642208	3642948	.	+	.	ID=GCA000153685_03433_gene;locus_tag=GCA000153685_03433
contig_1	Pyrodigal	CDS	3642208	3642948	.	+	0	ID=GCA000153685_03433;Name=TIGR03089 family protein;locus_tag=GCA000153685_03433;product=TIGR03089 family protein;Parent=GCA000153685_03433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899994.1,SO:0001217,UniParc:UPI00005EE805,UniRef:UniRef100_A0A0H3LFE1,UniRef:UniRef50_P96873,UniRef:UniRef90_P96873
contig_1	Pyrodigal	gene	3643073	3643354	.	+	.	ID=GCA000153685_03434_gene;locus_tag=GCA000153685_03434
contig_1	Pyrodigal	CDS	3643073	3643354	.	+	0	ID=GCA000153685_03434;Name=Conserved protein;locus_tag=GCA000153685_03434;product=Conserved protein;Parent=GCA000153685_03434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27044,RefSeq:WP_003417115.1,SO:0001217,UniParc:UPI00000C7FCC,UniRef:UniRef100_P96874,UniRef:UniRef50_P96874,UniRef:UniRef90_P96874
contig_1	Pyrodigal	gene	3643365	3645521	.	+	.	ID=GCA000153685_03435_gene;locus_tag=GCA000153685_03435;gene=ctpC
contig_1	Pyrodigal	CDS	3643365	3645521	.	+	0	ID=GCA000153685_03435;Name=manganese-exporting P-type ATPase CtpC;locus_tag=GCA000153685_03435;product=manganese-exporting P-type ATPase CtpC;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0016020,GO:0016887,GO:0043682,GO:0055070,GO:0140613;gene=ctpC;Parent=GCA000153685_03435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899995,COG:COG2217,COG:P,RefSeq:WP_003900665.1,SO:0001217,UniParc:UPI00012780D9,UniRef:UniRef100_UPI00012780D9,UniRef:UniRef50_P9WPT5,UniRef:UniRef90_P9WPT5;ec_number=7.2.2.22
contig_1	Pyrodigal	gene	3645518	3646186	.	-	.	ID=GCA000153685_03436_gene;locus_tag=GCA000153685_03436
contig_1	Pyrodigal	CDS	3645518	3646186	.	-	0	ID=GCA000153685_03436;Name=Conserved integral membrane protein;locus_tag=GCA000153685_03436;product=Conserved integral membrane protein;Parent=GCA000153685_03436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417119.1,SO:0001217,UniParc:UPI00000D1123,UniRef:UniRef100_A5U7U5,UniRef:UniRef50_A0A498QQ83,UniRef:UniRef90_A5U7U5
contig_1	Pyrodigal	gene	3646287	3647471	.	+	.	ID=GCA000153685_03437_gene;locus_tag=GCA000153685_03437
contig_1	Pyrodigal	CDS	3646287	3647471	.	+	0	ID=GCA000153685_03437;Name=putative fatty acyl-CoA transferase Rv3272;locus_tag=GCA000153685_03437;product=putative fatty acyl-CoA transferase Rv3272;Dbxref=GO:0016740;Parent=GCA000153685_03437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417120.1,SO:0001217,UniParc:UPI00000D605B,UniRef:UniRef100_P96877,UniRef:UniRef50_P96877,UniRef:UniRef90_P96877;ec_number=2.8.3.-
contig_1	Pyrodigal	gene	3647500	3649770	.	+	.	ID=GCA000153685_03438_gene;locus_tag=GCA000153685_03438
contig_1	Pyrodigal	CDS	3647500	3649770	.	+	0	ID=GCA000153685_03438;Name=carbonic anhydrase;locus_tag=GCA000153685_03438;product=carbonic anhydrase;Parent=GCA000153685_03438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01673,RefSeq:WP_003917141.1,SO:0001217,UniParc:UPI00005EE806,UniRef:UniRef100_P96878,UniRef:UniRef50_P96878,UniRef:UniRef90_P96878;ec_number=4.2.1.1
contig_1	Pyrodigal	gene	3649759	3650928	.	-	.	ID=GCA000153685_03439_gene;locus_tag=GCA000153685_03439;gene=fadE25
contig_1	Pyrodigal	CDS	3649759	3650928	.	-	0	ID=GCA000153685_03439;Name=putative acyl-CoA dehydrogenase FadE25;locus_tag=GCA000153685_03439;product=putative acyl-CoA dehydrogenase FadE25;Dbxref=GO:0003995,GO:0005829,GO:0005886,GO:0009274,GO:0050660;gene=fadE25;Parent=GCA000153685_03439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_003417122.1,SO:0001217,UniParc:UPI00001251EA,UniRef:UniRef100_P9WQG1,UniRef:UniRef50_P9WQG1,UniRef:UniRef90_P9WQG1;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3650953	3651477	.	-	.	ID=GCA000153685_03440_gene;locus_tag=GCA000153685_03440;gene=purE
contig_1	Pyrodigal	CDS	3650953	3651477	.	-	0	ID=GCA000153685_03440;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000153685_03440;product=N5-carboxyaminoimidazole ribonucleotide mutase;Dbxref=GO:0006189,GO:0034023;gene=purE;Parent=GCA000153685_03440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899997.1,SO:0001217,UniParc:UPI0000132A7B,UniRef:UniRef100_P9WHM1,UniRef:UniRef50_P9WHM1,UniRef:UniRef90_P9WHM1;ec_number=5.4.99.18
contig_1	Pyrodigal	gene	3651474	3652700	.	-	.	ID=GCA000153685_03441_gene;locus_tag=GCA000153685_03441;gene=purK
contig_1	Pyrodigal	CDS	3651474	3652700	.	-	0	ID=GCA000153685_03441;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000153685_03441;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0005886,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000153685_03441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE807,UniRef:UniRef100_P9WHL9,UniRef:UniRef50_P9WHL9,UniRef:UniRef90_P9WHL9;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	3652717	3653535	.	+	.	ID=GCA000153685_03442_gene;locus_tag=GCA000153685_03442
contig_1	Pyrodigal	CDS	3652717	3653535	.	+	0	ID=GCA000153685_03442;Name=GtrA/DPMS transmembrane domain-containing protein;locus_tag=GCA000153685_03442;product=GtrA/DPMS transmembrane domain-containing protein;Parent=GCA000153685_03442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899998.1,SO:0001217,UniParc:UPI00000CCC0F,UniRef:UniRef100_A5U7V1,UniRef:UniRef50_A0A0N0KNL3,UniRef:UniRef90_A0A1A2AY22
contig_1	Pyrodigal	gene	3653490	3654008	.	-	.	ID=GCA000153685_03443_gene;locus_tag=GCA000153685_03443
contig_1	Pyrodigal	CDS	3653490	3654008	.	-	0	ID=GCA000153685_03443;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000153685_03443;product=YdbS-like PH domain-containing protein;Parent=GCA000153685_03443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417130.1,SO:0001217,UniParc:UPI000003193C,UniRef:UniRef100_A5U7V2,UniRef:UniRef50_A0A1A3CEQ9,UniRef:UniRef90_R4M282
contig_1	Pyrodigal	gene	3654051	3654851	.	-	.	ID=GCA000153685_03444_gene;locus_tag=GCA000153685_03444;gene=birA
contig_1	Pyrodigal	CDS	3654051	3654851	.	-	0	ID=GCA000153685_03444;Name=Biotin--[acetyl-CoA-carboxylase] ligase;locus_tag=GCA000153685_03444;product=Biotin--[acetyl-CoA-carboxylase] ligase;Dbxref=GO:0004077,GO:0005524,GO:0005737,GO:0008284,GO:0009374,GO:0032991,GO:0036211,GO:0042803;gene=birA;Parent=GCA000153685_03444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03524,RefSeq:WP_003900666.1,SO:0001217,UniParc:UPI000127810A,UniRef:UniRef100_A0A0H3LLC3,UniRef:UniRef50_I6YFP0,UniRef:UniRef90_I6YFP0;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	3654874	3656547	.	+	.	ID=GCA000153685_03445_gene;locus_tag=GCA000153685_03445;gene=accD5
contig_1	Pyrodigal	CDS	3654874	3656547	.	+	0	ID=GCA000153685_03445;Name=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase beta5 subunit;locus_tag=GCA000153685_03445;product=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase beta5 subunit;Dbxref=GO:0003989,GO:0004658,GO:0005886,GO:0006629,GO:0009274,GO:0009317,GO:0015977,GO:0016740,GO:0032991,GO:0042802;gene=accD5;Parent=GCA000153685_03445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4799,COG:I,SO:0001217,UniParc:UPI000217884C,UniRef:UniRef100_P9WQH7,UniRef:UniRef50_P9WQH7,UniRef:UniRef90_P9WQH7
contig_1	Pyrodigal	gene	3656570	3656998	.	+	.	ID=GCA000153685_03446_gene;locus_tag=GCA000153685_03446;gene=accE5
contig_1	Pyrodigal	CDS	3656570	3656998	.	+	0	ID=GCA000153685_03446;Name=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase epsilon subunit;locus_tag=GCA000153685_03446;product=Biotin-dependent acetyl-/propionyl-coenzyme A carboxylase epsilon subunit;Dbxref=GO:0003989,GO:0004658,GO:0009274,GO:0009317,GO:0015977;gene=accE5;Parent=GCA000153685_03446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27095,RefSeq:WP_010924637.1,SO:0001217,UniParc:UPI00000D2D6D,UniRef:UniRef100_Q8VJ38,UniRef:UniRef50_P96886,UniRef:UniRef90_P96886
contig_1	Pyrodigal	gene	3656995	3657663	.	+	.	ID=GCA000153685_03447_gene;locus_tag=GCA000153685_03447
contig_1	Pyrodigal	CDS	3656995	3657663	.	+	0	ID=GCA000153685_03447;Name=Nucleoside triphosphate pyrophosphatase;locus_tag=GCA000153685_03447;product=Nucleoside triphosphate pyrophosphatase;Dbxref=GO:0005737,GO:0009117,GO:0106379;Parent=GCA000153685_03447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417146.1,SO:0001217,UniParc:UPI000013C1FA,UniRef:UniRef100_P9WK27,UniRef:UniRef50_P9WK27,UniRef:UniRef90_P9WK27;ec_number=3.6.1.9
contig_1	Pyrodigal	gene	3657632	3658597	.	+	.	ID=GCA000153685_03448_gene;locus_tag=GCA000153685_03448;gene=sseA
contig_1	Pyrodigal	CDS	3657632	3658597	.	+	0	ID=GCA000153685_03448;Name=Putative thiosulfate sulfurtransferase SseA;locus_tag=GCA000153685_03448;product=Putative thiosulfate sulfurtransferase SseA;Dbxref=GO:0004792,GO:0005829,GO:0005886,GO:0009274;gene=sseA;Parent=GCA000153685_03448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE809,UniRef:UniRef100_A0A0E8MSC5,UniRef:UniRef50_P9WHF7,UniRef:UniRef90_P9WHF7;ec_number=2.8.1.1
contig_1	Pyrodigal	gene	3658594	3659025	.	+	.	ID=GCA000153685_03449_gene;locus_tag=GCA000153685_03449
contig_1	Pyrodigal	CDS	3658594	3659025	.	+	0	ID=GCA000153685_03449;Name=putative SufE-like protein Mb3312;locus_tag=GCA000153685_03449;product=putative SufE-like protein Mb3312;Parent=GCA000153685_03449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417152.1,SO:0001217,UniParc:UPI000013C1FC,UniRef:UniRef100_P9WGC3,UniRef:UniRef50_P9WGC3,UniRef:UniRef90_P9WGC3
contig_1	Pyrodigal	gene	3659133	3660935	.	+	.	ID=GCA000153685_03450_gene;locus_tag=GCA000153685_03450;gene=accA3
contig_1	Pyrodigal	CDS	3659133	3660935	.	+	0	ID=GCA000153685_03450;Name=Biotin-dependent acyl-coenzyme A carboxylase alpha3 subunit;locus_tag=GCA000153685_03450;product=Biotin-dependent acyl-coenzyme A carboxylase alpha3 subunit;Dbxref=GO:0003989,GO:0004075,GO:0004658,GO:0005524,GO:0005886,GO:0006633,GO:0009274,GO:0009317,GO:0015977,GO:0046872;gene=accA3;Parent=GCA000153685_03450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4770,COG:I,RefSeq:WP_003417156.1,SO:0001217,UniParc:UPI00000D0F6C,UniRef:UniRef100_P96890,UniRef:UniRef50_P96890,UniRef:UniRef90_P96890
contig_1	Pyrodigal	gene	3660945	3661667	.	-	.	ID=GCA000153685_03451_gene;locus_tag=GCA000153685_03451;gene=sigF
contig_1	Pyrodigal	CDS	3660945	3661667	.	-	0	ID=GCA000153685_03451;Name=RNA polymerase sigma factor SigF;locus_tag=GCA000153685_03451;product=RNA polymerase sigma factor SigF;Dbxref=GO:0003677,GO:0006352,GO:0006355,GO:0006629,GO:0006979,GO:0006995,GO:0009409,GO:0016987,GO:0034059,GO:0043175,GO:0045893,GO:0046677,GO:0070417;gene=sigF;Parent=GCA000153685_03451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417158,KEGG:K03090,SO:0001217,UniParc:UPI0002D88218,UniRef:UniRef100_P9WGI3,UniRef:UniRef50_P9WGI3,UniRef:UniRef90_P9WGI3
contig_1	Pyrodigal	gene	3661727	3662164	.	-	.	ID=GCA000153685_03452_gene;locus_tag=GCA000153685_03452;gene=rsbW
contig_1	Pyrodigal	CDS	3661727	3662164	.	-	0	ID=GCA000153685_03452;Name=anti-sigma B factor RsbW;locus_tag=GCA000153685_03452;product=anti-sigma B factor RsbW;Dbxref=GO:0000166,GO:0005524,GO:0016787,GO:0016989,GO:0045892;gene=rsbW;Parent=GCA000153685_03452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000970578,BlastRules:WP_003234299,BlastRules:WP_003417160,BlastRules:WP_003893193,RefSeq:WP_003417160.1,SO:0001217,UniParc:UPI0000165195,UniRef:UniRef100_P9WGX7,UniRef:UniRef50_P9WGX7,UniRef:UniRef90_P9WGX7
contig_1	Pyrodigal	gene	3662362	3662673	.	-	.	ID=GCA000153685_03453_gene;locus_tag=GCA000153685_03453;gene=usfY
contig_1	Pyrodigal	CDS	3662362	3662673	.	-	0	ID=GCA000153685_03453;Name=protein UsfY;locus_tag=GCA000153685_03453;product=protein UsfY;gene=usfY;Parent=GCA000153685_03453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900003.1,SO:0001217,UniParc:UPI000016FB85,UniRef:UniRef100_L7N685,UniRef:UniRef50_L7N685,UniRef:UniRef90_L7N685
contig_1	Pyrodigal	gene	3662810	3663187	.	-	.	ID=GCA000153685_03454_gene;locus_tag=GCA000153685_03454
contig_1	Pyrodigal	CDS	3662810	3663187	.	-	0	ID=GCA000153685_03454;Name=Transmembrane protein;locus_tag=GCA000153685_03454;product=Transmembrane protein;Parent=GCA000153685_03454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417165.1,SO:0001217,UniParc:UPI00000D1140,UniRef:UniRef100_P96894,UniRef:UniRef50_A0A8I0EPT3,UniRef:UniRef90_A0A8I0EPT3
contig_1	Pyrodigal	gene	3663221	3664489	.	-	.	ID=GCA000153685_03455_gene;locus_tag=GCA000153685_03455;gene=lat
contig_1	Pyrodigal	CDS	3663221	3664489	.	-	0	ID=GCA000153685_03455;Name=L-lysine 6-transaminase;locus_tag=GCA000153685_03455;product=L-lysine 6-transaminase;Dbxref=GO:0009450,GO:0017000,GO:0030170,GO:0045484;gene=lat;Parent=GCA000153685_03455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03918,SO:0001217,UniParc:UPI00005EE80B,UniRef:UniRef100_P9WQ77,UniRef:UniRef50_P9WQ77,UniRef:UniRef90_P9WQ77;ec_number=2.6.1.36
contig_1	Pyrodigal	gene	3664621	3665073	.	-	.	ID=GCA000153685_03456_gene;locus_tag=GCA000153685_03456;gene=lrpA
contig_1	Pyrodigal	CDS	3664621	3665073	.	-	0	ID=GCA000153685_03456;Name=transcriptional regulator LrpA;locus_tag=GCA000153685_03456;product=transcriptional regulator LrpA;Dbxref=GO:0005829,GO:0043200,GO:0043565;gene=lrpA;Parent=GCA000153685_03456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417179,RefSeq:WP_003417179.1,SO:0001217,UniParc:UPI00000D603C,UniRef:UniRef100_I6YBQ3,UniRef:UniRef50_I6YBQ3,UniRef:UniRef90_I6YBQ3
contig_1	Pyrodigal	gene	3665104	3666351	.	+	.	ID=GCA000153685_03457_gene;locus_tag=GCA000153685_03457
contig_1	Pyrodigal	CDS	3665104	3666351	.	+	0	ID=GCA000153685_03457;Name=2-oxoadipate dioxygenase/decarboxylase;locus_tag=GCA000153685_03457;product=2-oxoadipate dioxygenase/decarboxylase;Dbxref=GO:0046872,GO:0051213;Parent=GCA000153685_03457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417184.1,SO:0001217,UniParc:UPI000013C1FF,UniRef:UniRef100_P9WL01,UniRef:UniRef50_P9WL01,UniRef:UniRef90_P9WL01;ec_number=1.13.11.93
contig_1	Pyrodigal	gene	3666378	3667862	.	+	.	ID=GCA000153685_03458_gene;locus_tag=GCA000153685_03458
contig_1	Pyrodigal	CDS	3666378	3667862	.	+	0	ID=GCA000153685_03458;Name=aldehyde dehydrogenase (NAD(+));locus_tag=GCA000153685_03458;product=aldehyde dehydrogenase (NAD(+));Parent=GCA000153685_03458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26061,RefSeq:WP_003417187.1,SO:0001217,UniParc:UPI00000D5E15,UniRef:UniRef100_L7N650,UniRef:UniRef50_L7N650,UniRef:UniRef90_L7N650
contig_1	Pyrodigal	gene	3667962	3668771	.	-	.	ID=GCA000153685_03459_gene;locus_tag=GCA000153685_03459
contig_1	Pyrodigal	CDS	3667962	3668771	.	-	0	ID=GCA000153685_03459;Name=DUF4143 domain-containing protein;locus_tag=GCA000153685_03459;product=DUF4143 domain-containing protein;Parent=GCA000153685_03459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07133,RefSeq:WP_003417192.1,SO:0001217,UniParc:UPI00000D2D6E,UniRef:UniRef100_L7N658,UniRef:UniRef50_L7N658,UniRef:UniRef90_L7N658
contig_1	Pyrodigal	gene	3668842	3669507	.	+	.	ID=GCA000153685_03460_gene;locus_tag=GCA000153685_03460
contig_1	Pyrodigal	CDS	3668842	3669507	.	+	0	ID=GCA000153685_03460;Name=TetR-family transcriptional regulator;locus_tag=GCA000153685_03460;product=TetR-family transcriptional regulator;Parent=GCA000153685_03460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417200.1,SO:0001217,UniParc:UPI00000D602F,UniRef:UniRef100_A5U7W9,UniRef:UniRef50_Q73UF4,UniRef:UniRef90_A5U7W9
contig_1	Pyrodigal	gene	3669551	3672304	.	+	.	ID=GCA000153685_03461_gene;locus_tag=GCA000153685_03461
contig_1	Pyrodigal	CDS	3669551	3672304	.	+	0	ID=GCA000153685_03461;Name=DEAD/DEAH box helicase;locus_tag=GCA000153685_03461;product=DEAD/DEAH box helicase;Parent=GCA000153685_03461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A3R8SJF2
contig_1	Pyrodigal	gene	3672439	3674091	.	+	.	ID=GCA000153685_03462_gene;locus_tag=GCA000153685_03462
contig_1	Pyrodigal	CDS	3672439	3674091	.	+	0	ID=GCA000153685_03462;Name=ATP-dependent helicase;locus_tag=GCA000153685_03462;product=ATP-dependent helicase;Parent=GCA000153685_03462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2W6DQ95,UniRef:UniRef90_UPI001265BCC3
contig_1	Pyrodigal	gene	3674095	3674862	.	+	.	ID=GCA000153685_03463_gene;locus_tag=GCA000153685_03463;gene=nei2
contig_1	Pyrodigal	CDS	3674095	3674862	.	+	0	ID=GCA000153685_03463;Name=endonuclease VIII Nei2;locus_tag=GCA000153685_03463;product=endonuclease VIII Nei2;Dbxref=GO:0000703,GO:0003684,GO:0003690,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0019104,GO:0140078;gene=nei2;Parent=GCA000153685_03463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05522,RefSeq:WP_003900006.1,SO:0001217,UniParc:UPI0000129EDE,UniRef:UniRef100_P9WNC1,UniRef:UniRef50_P9WNC1,UniRef:UniRef90_P9WNC1;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	3674885	3675784	.	-	.	ID=GCA000153685_03464_gene;locus_tag=GCA000153685_03464;gene=lpqC
contig_1	Pyrodigal	CDS	3674885	3675784	.	-	0	ID=GCA000153685_03464;Name=putative esterase lipoprotein LpqC;locus_tag=GCA000153685_03464;product=putative esterase lipoprotein LpqC;gene=lpqC;Parent=GCA000153685_03464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE80D,UniRef:UniRef100_P96903,UniRef:UniRef50_A0A2U3NAV3,UniRef:UniRef90_P96903
contig_1	Pyrodigal	gene	3675826	3678735	.	-	.	ID=GCA000153685_03465_gene;locus_tag=GCA000153685_03465;gene=atsB
contig_1	Pyrodigal	CDS	3675826	3678735	.	-	0	ID=GCA000153685_03465;Name=arylsulfatase AtsB;locus_tag=GCA000153685_03465;product=arylsulfatase AtsB;gene=atsB;Parent=GCA000153685_03465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417213,SO:0001217,UniParc:UPI00005EE80E,UniRef:UniRef100_Q7D5R3,UniRef:UniRef50_A0A1V5IK19,UniRef:UniRef90_A0A0H3LLE4
contig_1	Pyrodigal	gene	3678758	3679675	.	-	.	ID=GCA000153685_03466_gene;locus_tag=GCA000153685_03466
contig_1	Pyrodigal	CDS	3678758	3679675	.	-	0	ID=GCA000153685_03466;Name=Pseudouridine synthase RsuA/RluA-like domain-containing protein;locus_tag=GCA000153685_03466;product=Pseudouridine synthase RsuA/RluA-like domain-containing protein;Parent=GCA000153685_03466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06177,RefSeq:WP_003417215.1,SO:0001217,UniParc:UPI00000D4F49,UniRef:UniRef100_O07166,UniRef:UniRef50_A0A7W8FPH1,UniRef:UniRef90_O07166;ec_number=5.4.99.29
contig_1	Pyrodigal	gene	3679687	3680352	.	-	.	ID=GCA000153685_03467_gene;locus_tag=GCA000153685_03467;gene=phoU
contig_1	Pyrodigal	CDS	3679687	3680352	.	-	0	ID=GCA000153685_03467;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000153685_03467;product=phosphate signaling complex protein PhoU;Dbxref=GO:0005829,GO:0005886,GO:0006817,GO:0030643,GO:0042803,GO:0045936,GO:2000186;gene=phoU;Parent=GCA000153685_03467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417216.1,SO:0001217,UniParc:UPI0000131A44,UniRef:UniRef100_P9WI97,UniRef:UniRef50_P9WI97,UniRef:UniRef90_P9WI97
contig_1	Pyrodigal	gene	3680460	3682217	.	-	.	ID=GCA000153685_03468_gene;locus_tag=GCA000153685_03468;gene=glpD
contig_1	Pyrodigal	CDS	3680460	3682217	.	-	0	ID=GCA000153685_03468;Name=Glycerol-3-phosphate dehydrogenase;locus_tag=GCA000153685_03468;product=Glycerol-3-phosphate dehydrogenase;Dbxref=GO:0004368,GO:0005737,GO:0006071,GO:0046168;gene=glpD;Parent=GCA000153685_03468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_003417217.1,SO:0001217,UniParc:UPI00000D1060,UniRef:UniRef100_P9WN79,UniRef:UniRef50_P9WN79,UniRef:UniRef90_P9WN79;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	3682298	3683713	.	-	.	ID=GCA000153685_03469_gene;locus_tag=GCA000153685_03469;gene=lpdA
contig_1	Pyrodigal	CDS	3682298	3683713	.	-	0	ID=GCA000153685_03469;Name=NAD(P)H-quinone dehydrogenase;locus_tag=GCA000153685_03469;product=NAD(P)H-quinone dehydrogenase;Dbxref=GO:0003955,GO:0008753,GO:0016491,GO:0016655,GO:0045454,GO:0050136,GO:0050660,GO:0070401,GO:1990748;gene=lpdA;Parent=GCA000153685_03469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23842,SO:0001217,UniParc:UPI00000D2D6F,UniRef:UniRef100_P9WHH7,UniRef:UniRef50_P9WHH7,UniRef:UniRef90_P9WHH7;ec_number=1.6.5.2
contig_1	Pyrodigal	gene	3683854	3684453	.	+	.	ID=GCA000153685_03470_gene;locus_tag=GCA000153685_03470
contig_1	Pyrodigal	CDS	3683854	3684453	.	+	0	ID=GCA000153685_03470;Name=Gamma-glutamylcyclotransferase;locus_tag=GCA000153685_03470;product=Gamma-glutamylcyclotransferase;Parent=GCA000153685_03470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B44CB9,UniRef:UniRef100_Q7D5R1,UniRef:UniRef50_Q7D5R1,UniRef:UniRef90_Q7D5R1
contig_1	Pyrodigal	gene	3684472	3685641	.	-	.	ID=GCA000153685_03471_gene;locus_tag=GCA000153685_03471;gene=abgB
contig_1	Pyrodigal	CDS	3684472	3685641	.	-	0	ID=GCA000153685_03471;Name=N-acyl-L-amino acid amidohydrolase;locus_tag=GCA000153685_03471;product=N-acyl-L-amino acid amidohydrolase;gene=abgB;Parent=GCA000153685_03471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_003417220.1,SO:0001217,UniParc:UPI00000D5FAE,UniRef:UniRef100_L7N663,UniRef:UniRef50_A0A3S4RTR1,UniRef:UniRef90_A0A655IJV4
contig_1	Pyrodigal	gene	3685638	3686822	.	-	.	ID=GCA000153685_03472_gene;locus_tag=GCA000153685_03472
contig_1	Pyrodigal	CDS	3685638	3686822	.	-	0	ID=GCA000153685_03472;Name=Peptidase M20 domain-containing protein 2;locus_tag=GCA000153685_03472;product=Peptidase M20 domain-containing protein 2;Parent=GCA000153685_03472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900668.1,SO:0001217,UniParc:UPI0001278141,UniRef:UniRef100_A0A0H3LED8,UniRef:UniRef50_A0A7I9Z961,UniRef:UniRef90_L7N690
contig_1	Pyrodigal	gene	3686887	3687693	.	+	.	ID=GCA000153685_03473_gene;locus_tag=GCA000153685_03473;gene=punA
contig_1	Pyrodigal	CDS	3686887	3687693	.	+	0	ID=GCA000153685_03473;Name=purine-nucleoside phosphorylase;locus_tag=GCA000153685_03473;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0005737,GO:0006139,GO:0006161;gene=punA;Parent=GCA000153685_03473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03783,RefSeq:WP_003417233.1,SO:0001217,UniParc:UPI0000112FE6,UniRef:UniRef100_P9WP01,UniRef:UniRef50_P9WP01,UniRef:UniRef90_P9WP01;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	3687697	3689301	.	+	.	ID=GCA000153685_03474_gene;locus_tag=GCA000153685_03474
contig_1	Pyrodigal	CDS	3687697	3689301	.	+	0	ID=GCA000153685_03474;Name=Phosphomannomutase;locus_tag=GCA000153685_03474;product=Phosphomannomutase;Parent=GCA000153685_03474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900011.1,SO:0001217,UniParc:UPI00000D5FB8,UniRef:UniRef100_A5U7Y2,UniRef:UniRef50_A0A7W8CIF2,UniRef:UniRef90_A0A654ZW17
contig_1	Pyrodigal	gene	3689303	3690019	.	-	.	ID=GCA000153685_03475_gene;locus_tag=GCA000153685_03475;gene=upp
contig_1	Pyrodigal	CDS	3689303	3690019	.	-	0	ID=GCA000153685_03475;Name=uracil phosphoribosyltransferase;locus_tag=GCA000153685_03475;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000153685_03475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000F0D04D,UniRef:UniRef100_A0A679LIZ9,UniRef:UniRef50_P9WFF3,UniRef:UniRef90_P9WFF3;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	3690031	3690930	.	+	.	ID=GCA000153685_03476_gene;locus_tag=GCA000153685_03476;gene=sapM
contig_1	Pyrodigal	CDS	3690031	3690930	.	+	0	ID=GCA000153685_03476;Name=phosphatidylinositol-3-phosphatase;locus_tag=GCA000153685_03476;product=phosphatidylinositol-3-phosphatase;Dbxref=GO:0003993,GO:0004438,GO:0004805,GO:0005576,GO:0005737,GO:0005829,GO:0006742,GO:0009274,GO:0016791,GO:0044161,GO:0046854,GO:0050189,GO:0050192,GO:0052170;gene=sapM;Parent=GCA000153685_03476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900013,KEGG:K21302,RefSeq:WP_003900013.1,SO:0001217,UniParc:UPI00000D5FD8,UniRef:UniRef100_O53361,UniRef:UniRef50_O53361,UniRef:UniRef90_O53361;ec_number=3.1.3.64
contig_1	Pyrodigal	gene	3690954	3692216	.	+	.	ID=GCA000153685_03477_gene;locus_tag=GCA000153685_03477
contig_1	Pyrodigal	CDS	3690954	3692216	.	+	0	ID=GCA000153685_03477;Name=Primosomal protein;locus_tag=GCA000153685_03477;product=Primosomal protein;Parent=GCA000153685_03477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417251.1,SO:0001217,UniParc:UPI00000C1535,UniRef:UniRef100_O53362,UniRef:UniRef50_Q9CCL8,UniRef:UniRef90_R4MBM4
contig_1	Pyrodigal	gene	3692237	3693169	.	-	.	ID=GCA000153685_03478_gene;locus_tag=GCA000153685_03478
contig_1	Pyrodigal	CDS	3692237	3693169	.	-	0	ID=GCA000153685_03478;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000153685_03478;product=AB hydrolase-1 domain-containing protein;Parent=GCA000153685_03478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F92,UniRef:UniRef100_Q7D5Q6,UniRef:UniRef50_L7V7F1,UniRef:UniRef90_O53363
contig_1	Pyrodigal	gene	3693189	3693359	.	-	.	ID=GCA000153685_03479_gene;locus_tag=GCA000153685_03479
contig_1	Pyrodigal	CDS	3693189	3693359	.	-	0	ID=GCA000153685_03479;Name=hypothetical protein;locus_tag=GCA000153685_03479;product=hypothetical protein;Parent=GCA000153685_03479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900015.1,SO:0001217,UniParc:UPI00000D2D71,UniRef:UniRef100_A0A0H3LFI4,UniRef:UniRef50_A0A0H3LFI4,UniRef:UniRef90_A0A0H3LFI4
contig_1	Pyrodigal	gene	3693538	3693849	.	-	.	ID=GCA000153685_03480_gene;locus_tag=GCA000153685_03480;gene=mtp
contig_1	Pyrodigal	CDS	3693538	3693849	.	-	0	ID=GCA000153685_03480;Name=pilin structural subunit Mtp;locus_tag=GCA000153685_03480;product=pilin structural subunit Mtp;Dbxref=GO:0007155,GO:0009289;gene=mtp;Parent=GCA000153685_03480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417257,RefSeq:WP_003417257.1,SO:0001217,UniParc:UPI000004A972,UniRef:UniRef100_P9WI87,UniRef:UniRef50_P9WI87,UniRef:UniRef90_P9WI87
contig_1	Pyrodigal	gene	3693920	3695017	.	-	.	ID=GCA000153685_03481_gene;locus_tag=GCA000153685_03481;gene=add
contig_1	Pyrodigal	CDS	3693920	3695017	.	-	0	ID=GCA000153685_03481;Name=adenosine deaminase;locus_tag=GCA000153685_03481;product=adenosine deaminase;Dbxref=GO:0004000,GO:0005829,GO:0006154,GO:0008270,GO:0009117,GO:0009168,GO:0043103,GO:0046103,GO:0046936;gene=add;Parent=GCA000153685_03481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417259.1,SO:0001217,UniParc:UPI000012550F,UniRef:UniRef100_P63907,UniRef:UniRef50_P63907,UniRef:UniRef90_P63907;ec_number=3.5.4.4
contig_1	Pyrodigal	gene	3695017	3696300	.	-	.	ID=GCA000153685_03482_gene;locus_tag=GCA000153685_03482;gene=deoA
contig_1	Pyrodigal	CDS	3695017	3696300	.	-	0	ID=GCA000153685_03482;Name=thymidine phosphorylase;locus_tag=GCA000153685_03482;product=thymidine phosphorylase;Dbxref=GO:0004645,GO:0005829,GO:0006206,GO:0006213,GO:0009032;gene=deoA;Parent=GCA000153685_03482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900016.1,SO:0001217,UniParc:UPI000012918F,UniRef:UniRef100_P9WFS1,UniRef:UniRef50_P9WFS1,UniRef:UniRef90_P9WFS1;ec_number=2.4.2.4
contig_1	Pyrodigal	gene	3696297	3696698	.	-	.	ID=GCA000153685_03483_gene;locus_tag=GCA000153685_03483;gene=cdd
contig_1	Pyrodigal	CDS	3696297	3696698	.	-	0	ID=GCA000153685_03483;Name=cytidine deaminase;locus_tag=GCA000153685_03483;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005829,GO:0005886,GO:0008270,GO:0009972,GO:0043100,GO:0046109;gene=cdd;Parent=GCA000153685_03483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01489,RefSeq:WP_003417264.1,SO:0001217,UniParc:UPI00000D1109,UniRef:UniRef100_P9WPH3,UniRef:UniRef50_P9WPH3,UniRef:UniRef90_P9WPH3;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	3696935	3697273	.	+	.	ID=GCA000153685_03484_gene;locus_tag=GCA000153685_03484;gene=sdhC
contig_1	Pyrodigal	CDS	3696935	3697273	.	+	0	ID=GCA000153685_03484;Name=succinate dehydrogenase%2C cytochrome b556 subunit;locus_tag=GCA000153685_03484;product=succinate dehydrogenase%2C cytochrome b556 subunit;Dbxref=GO:0000104,GO:0005886,GO:0006099,GO:0009055,GO:0045273,GO:0046872;gene=sdhC;Parent=GCA000153685_03484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417267.1,SO:0001217,UniParc:UPI00000D5F04,UniRef:UniRef100_A5U7Z1,UniRef:UniRef50_O53368,UniRef:UniRef90_O53368
contig_1	Pyrodigal	gene	3697270	3697704	.	+	.	ID=GCA000153685_03485_gene;locus_tag=GCA000153685_03485;gene=sdhD
contig_1	Pyrodigal	CDS	3697270	3697704	.	+	0	ID=GCA000153685_03485;Name=Succinate dehydrogenase hydrophobic membrane anchor subunit SdhD;locus_tag=GCA000153685_03485;product=Succinate dehydrogenase hydrophobic membrane anchor subunit SdhD;gene=sdhD;Parent=GCA000153685_03485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417269.1,SO:0001217,UniParc:UPI0000165197,UniRef:UniRef100_A0A0H3LLG6,UniRef:UniRef50_A1T5G7,UniRef:UniRef90_A5U7Z2
contig_1	Pyrodigal	gene	3697857	3699605	.	+	.	ID=GCA000153685_03486_gene;locus_tag=GCA000153685_03486;gene=sdhA
contig_1	Pyrodigal	CDS	3697857	3699605	.	+	0	ID=GCA000153685_03486;Name=succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000153685_03486;product=succinate dehydrogenase flavoprotein subunit;Dbxref=GO:0006099,GO:0016627,GO:0050660;gene=sdhA;Parent=GCA000153685_03486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,SO:0001217,UniParc:UPI00005EE813,UniRef:UniRef100_A0A085YI65,UniRef:UniRef50_O53370,UniRef:UniRef90_A0A085YI65
contig_1	Pyrodigal	gene	3699605	3700396	.	+	.	ID=GCA000153685_03487_gene;locus_tag=GCA000153685_03487
contig_1	Pyrodigal	CDS	3699605	3700396	.	+	0	ID=GCA000153685_03487;Name=succinate dehydrogenase;locus_tag=GCA000153685_03487;product=succinate dehydrogenase;Parent=GCA000153685_03487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417279.1,SO:0001217,UniParc:UPI00000D6041,UniRef:UniRef100_O53371,UniRef:UniRef50_A0A7W3TD79,UniRef:UniRef90_O53371
contig_1	Pyrodigal	gene	3700475	3700903	.	-	.	ID=GCA000153685_03488_gene;locus_tag=GCA000153685_03488;gene=vapC44
contig_1	Pyrodigal	CDS	3700475	3700903	.	-	0	ID=GCA000153685_03488;Name=Ribonuclease VapC44;locus_tag=GCA000153685_03488;product=Ribonuclease VapC44;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC44;Parent=GCA000153685_03488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417282.1,SO:0001217,UniParc:UPI00000D0F35,UniRef:UniRef100_P9WF53,UniRef:UniRef50_P9WF53,UniRef:UniRef90_P9WF53;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3700907	3701149	.	-	.	ID=GCA000153685_03489_gene;locus_tag=GCA000153685_03489;gene=vapB44
contig_1	Pyrodigal	CDS	3700907	3701149	.	-	0	ID=GCA000153685_03489;Name=Putative antitoxin VapB44;locus_tag=GCA000153685_03489;product=Putative antitoxin VapB44;Dbxref=GO:0052572;gene=vapB44;Parent=GCA000153685_03489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417286.1,SO:0001217,UniParc:UPI00000D6037,UniRef:UniRef100_P9WJ17,UniRef:UniRef50_P9WJ17,UniRef:UniRef90_P9WJ17
contig_1	Pyrodigal	gene	3701271	3701885	.	-	.	ID=GCA000153685_03490_gene;locus_tag=GCA000153685_03490
contig_1	Pyrodigal	CDS	3701271	3701885	.	-	0	ID=GCA000153685_03490;Name=putative methyltransferase;locus_tag=GCA000153685_03490;product=putative methyltransferase;Parent=GCA000153685_03490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417288.1,SO:0001217,UniParc:UPI00000D0F57,UniRef:UniRef100_L7N687,UniRef:UniRef50_O05796,UniRef:UniRef90_L7N687
contig_1	Pyrodigal	gene	3701882	3702547	.	-	.	ID=GCA000153685_03491_gene;locus_tag=GCA000153685_03491;gene=moaD
contig_1	Pyrodigal	CDS	3701882	3702547	.	-	0	ID=GCA000153685_03491;Name=molybdopterin converting factor subunit 1;locus_tag=GCA000153685_03491;product=molybdopterin converting factor subunit 1;Dbxref=GO:0003824,GO:0006777;gene=moaD;Parent=GCA000153685_03491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03635,RefSeq:WP_003417290.1,SO:0001217,UniParc:UPI00000D6060,UniRef:UniRef100_A5U7Z8,UniRef:UniRef50_A0A3S4BLB7,UniRef:UniRef90_A0A2I7WC92;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	3702548	3703081	.	-	.	ID=GCA000153685_03492_gene;locus_tag=GCA000153685_03492;gene=moaC
contig_1	Pyrodigal	CDS	3702548	3703081	.	-	0	ID=GCA000153685_03492;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000153685_03492;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000153685_03492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417293.1,SO:0001217,UniParc:UPI000012F36A,UniRef:UniRef100_P9WJR5,UniRef:UniRef50_P9WJR5,UniRef:UniRef90_P9WJR5;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	3703078	3703452	.	-	.	ID=GCA000153685_03493_gene;locus_tag=GCA000153685_03493
contig_1	Pyrodigal	CDS	3703078	3703452	.	-	0	ID=GCA000153685_03493;Name=Putative pterin-4-alpha-carbinolamine dehydratase;locus_tag=GCA000153685_03493;product=Putative pterin-4-alpha-carbinolamine dehydratase;Parent=GCA000153685_03493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01724,RefSeq:WP_003417295.1,SO:0001217,UniParc:UPI00000D2D73,UniRef:UniRef100_A0A1R3Y3T7,UniRef:UniRef50_A0A1R3Y3T7,UniRef:UniRef90_A0A1R3Y3T7;ec_number=4.2.1.96
contig_1	Pyrodigal	gene	3703549	3704685	.	-	.	ID=GCA000153685_03494_gene;locus_tag=GCA000153685_03494;gene=moaA
contig_1	Pyrodigal	CDS	3703549	3704685	.	-	0	ID=GCA000153685_03494;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000153685_03494;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000153685_03494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417297.1,SO:0001217,UniParc:UPI000012F2D0,UniRef:UniRef100_P62588,UniRef:UniRef50_P9WJS3,UniRef:UniRef90_P62588;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	3705258	3706403	.	+	.	ID=GCA000153685_03495_gene;locus_tag=GCA000153685_03495
contig_1	Pyrodigal	CDS	3705258	3706403	.	+	0	ID=GCA000153685_03495;Name=putative TRANSCRIPTIONAL REGULATORY PROTEIN EMBR2;locus_tag=GCA000153685_03495;product=putative TRANSCRIPTIONAL REGULATORY PROTEIN EMBR2;Parent=GCA000153685_03495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417299.1,SO:0001217,UniParc:UPI00000D2B1B,UniRef:UniRef100_W8CEU7,UniRef:UniRef50_A0A7Z7IPF4,UniRef:UniRef90_A0A1R3Y3W7
contig_1	Pyrodigal	gene	3706498	3706902	.	-	.	ID=GCA000153685_03496_gene;locus_tag=GCA000153685_03496
contig_1	Pyrodigal	CDS	3706498	3706902	.	-	0	ID=GCA000153685_03496;Name=Is6110%2C transposase;locus_tag=GCA000153685_03496;product=Is6110%2C transposase;Parent=GCA000153685_03496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_042916940.1,SO:0001217,UniParc:UPI000169A524,UniRef:UniRef100_UPI000169A524,UniRef:UniRef50_A0A829C4I2,UniRef:UniRef90_UPI000678F46F
contig_1	Pyrodigal	gene	3706938	3707264	.	+	.	ID=GCA000153685_03497_gene;locus_tag=GCA000153685_03497;gene=tnp
contig_1	Pyrodigal	CDS	3706938	3707264	.	+	0	ID=GCA000153685_03497;Name=IS3 family IS987 transposase ORF A;locus_tag=GCA000153685_03497;product=IS3 family IS987 transposase ORF A;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006313;gene=tnp;Parent=GCA000153685_03497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS987,RefSeq:WP_003899493.1,SO:0001217,UniParc:UPI000013B35E,UniRef:UniRef100_P9WKH5,UniRef:UniRef50_P9WKH5,UniRef:UniRef90_P9WKH5
contig_1	Pyrodigal	gene	3707315	3708199	.	+	.	ID=GCA000153685_03498_gene;locus_tag=GCA000153685_03498;gene=tnp
contig_1	Pyrodigal	CDS	3707315	3708199	.	+	0	ID=GCA000153685_03498;Name=IS3 family transposase ORF B;locus_tag=GCA000153685_03498;product=IS3 family transposase ORF B;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000153685_03498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899492.1,SO:0001217,UniParc:UPI0000165142,UniRef:UniRef100_A0A0H3LCU3,UniRef:UniRef50_P9WKH9,UniRef:UniRef90_P9WKH9
contig_1	Pyrodigal	gene	3708484	3710196	.	+	.	ID=GCA000153685_03499_gene;locus_tag=GCA000153685_03499
contig_1	Pyrodigal	CDS	3708484	3710196	.	+	0	ID=GCA000153685_03499;Name=IS110 family transposase;locus_tag=GCA000153685_03499;product=IS110 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_03499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917764.1,SO:0001217,UniParc:UPI0001FB6B50,UniRef:UniRef100_Q8VJ30,UniRef:UniRef50_Q8VJ30,UniRef:UniRef90_Q8VJ30
contig_1	Pyrodigal	gene	3710129	3711076	.	-	.	ID=GCA000153685_03500_gene;locus_tag=GCA000153685_03500;gene=sigJ
contig_1	Pyrodigal	CDS	3710129	3711076	.	-	0	ID=GCA000153685_03500;Name=sigma-70 family RNA polymerase sigma factor SigJ;locus_tag=GCA000153685_03500;product=sigma-70 family RNA polymerase sigma factor SigJ;Dbxref=GO:0003677,GO:0006352,GO:0016987,GO:0042542;gene=sigJ;Parent=GCA000153685_03500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009935306,SO:0001217,UniParc:UPI00005EE818,UniRef:UniRef100_A0A0E8VAR5,UniRef:UniRef50_L0TCG5,UniRef:UniRef90_L0TCG5
contig_1	Pyrodigal	gene	3711127	3712443	.	+	.	ID=GCA000153685_03501_gene;locus_tag=GCA000153685_03501
contig_1	Pyrodigal	CDS	3711127	3712443	.	+	0	ID=GCA000153685_03501;Name=aspartate aminotransferase family protein;locus_tag=GCA000153685_03501;product=aspartate aminotransferase family protein;Dbxref=GO:0004015,GO:0008483,GO:0009102,GO:0030170;Parent=GCA000153685_03501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A9202,UniRef:UniRef100_A0A0H3LEC1,UniRef:UniRef50_O53379,UniRef:UniRef90_O53379;ec_number=2.6.1.-
contig_1	Pyrodigal	gene	3712512	3713729	.	+	.	ID=GCA000153685_03502_gene;locus_tag=GCA000153685_03502;gene=dacB1
contig_1	Pyrodigal	CDS	3712512	3713729	.	+	0	ID=GCA000153685_03502;Name=D-alanyl-D-alanine carboxypeptidase DacB1;locus_tag=GCA000153685_03502;product=D-alanyl-D-alanine carboxypeptidase DacB1;Dbxref=GO:0005886,GO:0006508,GO:0008360,GO:0009002,GO:0009252,GO:0071555;gene=dacB1;Parent=GCA000153685_03502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417415,KEGG:K07258,RefSeq:WP_003417415.1,SO:0001217,UniParc:UPI00000D5F77,UniRef:UniRef100_O53380,UniRef:UniRef50_O53380,UniRef:UniRef90_O53380;ec_number=3.4.16.-
contig_1	Pyrodigal	gene	3713825	3715333	.	+	.	ID=GCA000153685_03503_gene;locus_tag=GCA000153685_03503;gene=sugI
contig_1	Pyrodigal	CDS	3713825	3715333	.	+	0	ID=GCA000153685_03503;Name=putative sugar-transport integral membrane protein SugI;locus_tag=GCA000153685_03503;product=putative sugar-transport integral membrane protein SugI;gene=sugI;Parent=GCA000153685_03503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001A9203,UniRef:UniRef100_A5U806,UniRef:UniRef50_L0TDU1,UniRef:UniRef90_L0TDU1
contig_1	Pyrodigal	gene	3715330	3716481	.	+	.	ID=GCA000153685_03504_gene;locus_tag=GCA000153685_03504;gene=nagA
contig_1	Pyrodigal	CDS	3715330	3716481	.	+	0	ID=GCA000153685_03504;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000153685_03504;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA000153685_03504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01443,RefSeq:WP_003417418.1,SO:0001217,UniParc:UPI00000D4F94,UniRef:UniRef100_A5U807,UniRef:UniRef50_H6MS64,UniRef:UniRef90_Q7D5P4;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	3716672	3717517	.	-	.	ID=GCA000153685_03505_gene;locus_tag=GCA000153685_03505;gene=prp1
contig_1	Pyrodigal	CDS	3716672	3717517	.	-	0	ID=GCA000153685_03505;Name=PDZ-interacting protease regulator Ppr1;locus_tag=GCA000153685_03505;product=PDZ-interacting protease regulator Ppr1;gene=prp1;Parent=GCA000153685_03505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417421,RefSeq:WP_003417421.1,SO:0001217,UniParc:UPI00000CCB6D,UniRef:UniRef100_A0A0H3LEC6,UniRef:UniRef50_A0A8I0ER34,UniRef:UniRef90_A0A8I0ER34
contig_1	Pyrodigal	gene	3717662	3717973	.	+	.	ID=GCA000153685_03506_gene;locus_tag=GCA000153685_03506
contig_1	Pyrodigal	CDS	3717662	3717973	.	+	0	ID=GCA000153685_03506;Name=hypothetical protein;locus_tag=GCA000153685_03506;product=hypothetical protein;Parent=GCA000153685_03506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_011799336.1,SO:0001217,UniParc:UPI0000ED536F,UniRef:UniRef100_Q8VJ25,UniRef:UniRef50_Q8VJ25,UniRef:UniRef90_Q8VJ25
contig_1	Pyrodigal	gene	3717992	3718432	.	+	.	ID=GCA000153685_03507_gene;locus_tag=GCA000153685_03507;gene=merR
contig_1	Pyrodigal	CDS	3717992	3718432	.	+	0	ID=GCA000153685_03507;Name=MerR family transcriptional regulator;locus_tag=GCA000153685_03507;product=MerR family transcriptional regulator;gene=merR;Parent=GCA000153685_03507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900026.1,SO:0001217,UniParc:UPI00000D5EBA,UniRef:UniRef100_A5U809,UniRef:UniRef50_R4M713,UniRef:UniRef90_A5U809
contig_1	Pyrodigal	gene	3718466	3719335	.	-	.	ID=GCA000153685_03508_gene;locus_tag=GCA000153685_03508;gene=yhjD
contig_1	Pyrodigal	CDS	3718466	3719335	.	-	0	ID=GCA000153685_03508;Name=inner membrane protein YhjD;locus_tag=GCA000153685_03508;product=inner membrane protein YhjD;gene=yhjD;Parent=GCA000153685_03508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417435.1,SO:0001217,UniParc:UPI00000D11E7,UniRef:UniRef100_A5U810,UniRef:UniRef50_A0A0F4ERJ3,UniRef:UniRef90_A0A8I0ESE5
contig_1	Pyrodigal	gene	3719356	3720366	.	-	.	ID=GCA000153685_03509_gene;locus_tag=GCA000153685_03509;gene=trpS
contig_1	Pyrodigal	CDS	3719356	3720366	.	-	0	ID=GCA000153685_03509;Name=tryptophan--tRNA ligase;locus_tag=GCA000153685_03509;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0005886,GO:0006436;gene=trpS;Parent=GCA000153685_03509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417440.1,SO:0001217,UniParc:UPI0000136734,UniRef:UniRef100_P9WFT3,UniRef:UniRef50_P9WFT3,UniRef:UniRef90_P9WFT3;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	3720651	3721283	.	+	.	ID=GCA000153685_03510_gene;locus_tag=GCA000153685_03510
contig_1	Pyrodigal	CDS	3720651	3721283	.	+	0	ID=GCA000153685_03510;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000153685_03510;product=AB hydrolase-1 domain-containing protein;Parent=GCA000153685_03510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009940431.1,SO:0001217,UniParc:UPI00005F6456,UniRef:UniRef100_A0A0H3LLI9,UniRef:UniRef50_A0A1A3T4C7,UniRef:UniRef90_A0A0H3LLI9
contig_1	Pyrodigal	gene	3721350	3722579	.	-	.	ID=GCA000153685_03511_gene;locus_tag=GCA000153685_03511;gene=icd-1
contig_1	Pyrodigal	CDS	3721350	3722579	.	-	0	ID=GCA000153685_03511;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000153685_03511;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0005886,GO:0006097,GO:0006099,GO:0006102,GO:0008270,GO:0051287;gene=icd-1;Parent=GCA000153685_03511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,KEGG:K00031,RefSeq:WP_003417452.1,SO:0001217,UniParc:UPI000012D1CF,UniRef:UniRef100_P9WKL1,UniRef:UniRef50_P9WKL1,UniRef:UniRef90_P9WKL1;ec_number=1.1.1.42
contig_1	Infernal	regulatory_region	3722706	3722825	7.8e-17	+	.	ID=FNJOPAJJMO_75;Name=SAM (S-adenosyl methionine) riboswitch aptamer;product=SAM (S-adenosyl methionine) riboswitch aptamer;Dbxref=RFAM:RF00634;inference=profile:Rfam:RF00634;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	3722862	3724211	.	+	.	ID=GCA000153685_03512_gene;locus_tag=GCA000153685_03512
contig_1	Pyrodigal	CDS	3722862	3724211	.	+	0	ID=GCA000153685_03512;Name=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;locus_tag=GCA000153685_03512;product=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;Dbxref=GO:0016765,GO:0019346;Parent=GCA000153685_03512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900028.1,SO:0001217,UniParc:UPI00000D5E8A,UniRef:UniRef100_A5U814,UniRef:UniRef50_A0A3S4T6Q2,UniRef:UniRef90_A0A3S4FP16;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	3724223	3725362	.	+	.	ID=GCA000153685_03513_gene;locus_tag=GCA000153685_03513;gene=metXA
contig_1	Pyrodigal	CDS	3724223	3725362	.	+	0	ID=GCA000153685_03513;Name=homoserine O-acetyltransferase;locus_tag=GCA000153685_03513;product=homoserine O-acetyltransferase;Dbxref=GO:0004414,GO:0005737,GO:0009058,GO:0009086,GO:0009092,GO:0016747;gene=metXA;Parent=GCA000153685_03513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417458.1,SO:0001217,UniParc:UPI000012F015,UniRef:UniRef100_P9WJY9,UniRef:UniRef50_P9WJY9,UniRef:UniRef90_P9WJY9;ec_number=2.3.1.31
contig_1	Pyrodigal	gene	3725380	3726090	.	+	.	ID=GCA000153685_03514_gene;locus_tag=GCA000153685_03514
contig_1	Pyrodigal	CDS	3725380	3726090	.	+	0	ID=GCA000153685_03514;Name=putative methyltransferase Rv3342;locus_tag=GCA000153685_03514;product=putative methyltransferase Rv3342;Dbxref=GO:0008168,GO:0008757,GO:0032259;Parent=GCA000153685_03514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016519D,UniRef:UniRef100_P9WK01,UniRef:UniRef50_P9WK01,UniRef:UniRef90_P9WK01;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3726099	3731942	.	-	.	ID=GCA000153685_03515_gene;locus_tag=GCA000153685_03515
contig_1	Pyrodigal	CDS	3726099	3731942	.	-	0	ID=GCA000153685_03515;Name=PPE family protein;locus_tag=GCA000153685_03515;product=PPE family protein;Parent=GCA000153685_03515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345172.1,SO:0001217,UniParc:UPI0002A801EC,UniRef:UniRef100_A0A0H3LED6,UniRef:UniRef50_A0A0H3LED6,UniRef:UniRef90_A0A0H3LED6
contig_1	Pyrodigal	gene	3731991	3733007	.	-	.	ID=GCA000153685_03516_gene;locus_tag=GCA000153685_03516
contig_1	Pyrodigal	CDS	3731991	3733007	.	-	0	ID=GCA000153685_03516;Name=PE-PGRS family protein;locus_tag=GCA000153685_03516;product=PE-PGRS family protein;Parent=GCA000153685_03516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938644.1,SO:0001217,UniParc:UPI00000D2D7B,UniRef:UniRef100_A0A0H3LEG7,UniRef:UniRef50_R4MD19,UniRef:UniRef90_A0A8I0EQ51
contig_1	Pyrodigal	gene	3733165	3737823	.	-	.	ID=GCA000153685_03517_gene;locus_tag=GCA000153685_03517
contig_1	Pyrodigal	CDS	3733165	3737823	.	-	0	ID=GCA000153685_03517;Name=PE family protein;locus_tag=GCA000153685_03517;product=PE family protein;Parent=GCA000153685_03517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002E1F96B,UniRef:UniRef100_A0AA44RN09,UniRef:UniRef50_A0AA44RN09,UniRef:UniRef90_A0AA44RN09
contig_1	Pyrodigal	gene	3738253	3738510	.	-	.	ID=GCA000153685_03518_gene;locus_tag=GCA000153685_03518
contig_1	Pyrodigal	CDS	3738253	3738510	.	-	0	ID=GCA000153685_03518;Name=DUF3017 domain-containing protein;locus_tag=GCA000153685_03518;product=DUF3017 domain-containing protein;Parent=GCA000153685_03518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417619.1,SO:0001217,UniParc:UPI00000D111B,UniRef:UniRef100_O50377,UniRef:UniRef50_G8RM62,UniRef:UniRef90_A5U829
contig_1	Pyrodigal	gene	3738766	3748197	.	-	.	ID=GCA000153685_03519_gene;locus_tag=GCA000153685_03519
contig_1	Pyrodigal	CDS	3738766	3748197	.	-	0	ID=GCA000153685_03519;Name=PPE family protein;locus_tag=GCA000153685_03519;product=PPE family protein;Parent=GCA000153685_03519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0005E53B39,UniRef:UniRef100_A0AA44RMK2,UniRef:UniRef50_A0A1X0FMB9,UniRef:UniRef90_A5U820
contig_1	Pyrodigal	gene	3748820	3749311	.	+	.	ID=GCA000153685_03520_gene;locus_tag=GCA000153685_03520
contig_1	Pyrodigal	CDS	3748820	3749311	.	+	0	ID=GCA000153685_03520;Name=putative transposase;locus_tag=GCA000153685_03520;product=putative transposase;Parent=GCA000153685_03520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003422266.1,SO:0001217,UniParc:UPI00000D605E,UniRef:UniRef100_P96234,UniRef:UniRef50_P96234,UniRef:UniRef90_P96234
contig_1	Pyrodigal	gene	3749324	3749605	.	+	.	ID=GCA000153685_03521_gene;locus_tag=GCA000153685_03521
contig_1	Pyrodigal	CDS	3749324	3749605	.	+	0	ID=GCA000153685_03521;Name=hypothetical protein;locus_tag=GCA000153685_03521;product=hypothetical protein;Parent=GCA000153685_03521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000320CACC,UniRef:UniRef100_A0AA44LSA6,UniRef:UniRef50_A0A655FZ17,UniRef:UniRef90_A0A655FZ17
contig_1	Pyrodigal	gene	3749640	3750770	.	-	.	ID=GCA000153685_03522_gene;locus_tag=GCA000153685_03522
contig_1	Pyrodigal	CDS	3749640	3750770	.	-	0	ID=GCA000153685_03522;Name=Transposase%2C degenerate;locus_tag=GCA000153685_03522;product=Transposase%2C degenerate;Parent=GCA000153685_03522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004028E5,UniRef:UniRef100_Q6AQW0,UniRef:UniRef50_Q6AQW0,UniRef:UniRef90_Q6AQW0
contig_1	Pyrodigal	gene	3751007	3755809	.	-	.	ID=GCA000153685_03523_gene;locus_tag=GCA000153685_03523
contig_1	Pyrodigal	CDS	3751007	3755809	.	-	0	ID=GCA000153685_03523;Name=PPE family protein;locus_tag=GCA000153685_03523;product=PPE family protein;Parent=GCA000153685_03523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456503.1,SO:0001217,UniParc:UPI000252D38D,UniRef:UniRef100_A0A0H3LLK6,UniRef:UniRef50_A0A0H3LLK6,UniRef:UniRef90_A0A0H3LLK6
contig_1	Pyrodigal	gene	3755879	3762310	.	-	.	ID=GCA000153685_03524_gene;locus_tag=GCA000153685_03524
contig_1	Pyrodigal	CDS	3755879	3762310	.	-	0	ID=GCA000153685_03524;Name=PPE family protein PPE42;locus_tag=GCA000153685_03524;product=PPE family protein PPE42;Parent=GCA000153685_03524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045BA19B,UniRef:UniRef100_A0A1K4CN18,UniRef:UniRef50_A0A0H3LEE7,UniRef:UniRef90_A0A1K4CN18
contig_1	Pyrodigal	gene	3762389	3763183	.	-	.	ID=GCA000153685_03525_gene;locus_tag=GCA000153685_03525
contig_1	Pyrodigal	CDS	3762389	3763183	.	-	0	ID=GCA000153685_03525;Name=Berberine/berberine-like domain-containing protein;locus_tag=GCA000153685_03525;product=Berberine/berberine-like domain-containing protein;Parent=GCA000153685_03525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417738.1,SO:0001217,UniParc:UPI00000D117F,UniRef:UniRef100_O50380,UniRef:UniRef50_O50380,UniRef:UniRef90_O50380
contig_1	Pyrodigal	gene	3763265	3763636	.	-	.	ID=GCA000153685_03526_gene;locus_tag=GCA000153685_03526
contig_1	Pyrodigal	CDS	3763265	3763636	.	-	0	ID=GCA000153685_03526;Name=Oxidoreductase;locus_tag=GCA000153685_03526;product=Oxidoreductase;Parent=GCA000153685_03526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417739.1,SO:0001217,UniParc:UPI00000D103B,UniRef:UniRef100_O50381,UniRef:UniRef50_A0A655ETA1,UniRef:UniRef90_A0A655ETA1
contig_1	Pyrodigal	gene	3763779	3764039	.	-	.	ID=GCA000153685_03527_gene;locus_tag=GCA000153685_03527
contig_1	Pyrodigal	CDS	3763779	3764039	.	-	0	ID=GCA000153685_03527;Name=Oxidoreductase;locus_tag=GCA000153685_03527;product=Oxidoreductase;Parent=GCA000153685_03527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417741.1,SO:0001217,UniParc:UPI00001A9209,UniRef:UniRef100_O50382,UniRef:UniRef50_O50382,UniRef:UniRef90_O50382
contig_1	Pyrodigal	gene	3764154	3764543	.	+	.	ID=GCA000153685_03528_gene;locus_tag=GCA000153685_03528
contig_1	Pyrodigal	CDS	3764154	3764543	.	+	0	ID=GCA000153685_03528;Name=DUF732 domain-containing protein;locus_tag=GCA000153685_03528;product=DUF732 domain-containing protein;Parent=GCA000153685_03528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417745.1,SO:0001217,UniParc:UPI00000D0FAA,UniRef:UniRef100_O50383,UniRef:UniRef50_O50383,UniRef:UniRef90_O50383
contig_1	Pyrodigal	gene	3764557	3764850	.	-	.	ID=GCA000153685_03529_gene;locus_tag=GCA000153685_03529
contig_1	Pyrodigal	CDS	3764557	3764850	.	-	0	ID=GCA000153685_03529;Name=DUF3017 domain-containing protein;locus_tag=GCA000153685_03529;product=DUF3017 domain-containing protein;Parent=GCA000153685_03529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417749.1,SO:0001217,UniParc:UPI00000D0F26,UniRef:UniRef100_A5U829,UniRef:UniRef50_G8RM62,UniRef:UniRef90_A5U829
contig_1	Pyrodigal	gene	3764847	3765764	.	-	.	ID=GCA000153685_03530_gene;locus_tag=GCA000153685_03530
contig_1	Pyrodigal	CDS	3764847	3765764	.	-	0	ID=GCA000153685_03530;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;locus_tag=GCA000153685_03530;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;Dbxref=GO:0004488;Parent=GCA000153685_03530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE824,UniRef:UniRef100_A0A0H3LEI1,UniRef:UniRef50_A0QSY5,UniRef:UniRef90_A0A0H3LEI1
contig_1	Pyrodigal	gene	3765816	3766091	.	+	.	ID=GCA000153685_03531_gene;locus_tag=GCA000153685_03531;gene=relJ
contig_1	Pyrodigal	CDS	3765816	3766091	.	+	0	ID=GCA000153685_03531;Name=type II toxin-antitoxin system antitoxin RelJ;locus_tag=GCA000153685_03531;product=type II toxin-antitoxin system antitoxin RelJ;Dbxref=GO:0003677,GO:0006355;gene=relJ;Parent=GCA000153685_03531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417757,KEGG:K19159,RefSeq:WP_003417757.1,SO:0001217,UniParc:UPI000013C233,UniRef:UniRef100_P9WF25,UniRef:UniRef50_P9WF25,UniRef:UniRef90_P9WF25
contig_1	Pyrodigal	gene	3766088	3766345	.	+	.	ID=GCA000153685_03532_gene;locus_tag=GCA000153685_03532;gene=yoeB
contig_1	Pyrodigal	CDS	3766088	3766345	.	+	0	ID=GCA000153685_03532;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000153685_03532;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0004519,GO:0006401,GO:0008219,GO:0045892;gene=yoeB;Parent=GCA000153685_03532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417760.1,SO:0001217,UniParc:UPI000013C234,UniRef:UniRef100_P9WF09,UniRef:UniRef50_P9WF09,UniRef:UniRef90_P9WF09;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3766387	3767577	.	+	.	ID=GCA000153685_03533_gene;locus_tag=GCA000153685_03533
contig_1	Pyrodigal	CDS	3766387	3767577	.	+	0	ID=GCA000153685_03533;Name=putative oxidoreductase;locus_tag=GCA000153685_03533;product=putative oxidoreductase;Parent=GCA000153685_03533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900033.1,SO:0001217,UniParc:UPI00000D5E78,UniRef:UniRef100_O50388,UniRef:UniRef50_A0A231GU29,UniRef:UniRef90_O50388
contig_1	Pyrodigal	gene	3767799	3768062	.	+	.	ID=GCA000153685_03534_gene;locus_tag=GCA000153685_03534
contig_1	Pyrodigal	CDS	3767799	3768062	.	+	0	ID=GCA000153685_03534;Name=FHA domain-containing protein;locus_tag=GCA000153685_03534;product=FHA domain-containing protein;Parent=GCA000153685_03534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3LEF7,UniRef:UniRef90_A0A0H3LEF7
contig_1	Pyrodigal	gene	3768059	3768610	.	-	.	ID=GCA000153685_03535_gene;locus_tag=GCA000153685_03535;gene=mfpA
contig_1	Pyrodigal	CDS	3768059	3768610	.	-	0	ID=GCA000153685_03535;Name=pentapeptide repeat protein MfpA;locus_tag=GCA000153685_03535;product=pentapeptide repeat protein MfpA;gene=mfpA;Parent=GCA000153685_03535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417767.1,SO:0001217,UniParc:UPI00000D5FF8,UniRef:UniRef100_I6YBX3,UniRef:UniRef50_A0QSY0,UniRef:UniRef90_I6YBX3
contig_1	Pyrodigal	gene	3768617	3769198	.	-	.	ID=GCA000153685_03536_gene;locus_tag=GCA000153685_03536
contig_1	Pyrodigal	CDS	3768617	3769198	.	-	0	ID=GCA000153685_03536;Name=ATP/GTP-binding protein;locus_tag=GCA000153685_03536;product=ATP/GTP-binding protein;Parent=GCA000153685_03536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417769.1,SO:0001217,UniParc:UPI00000D1135,UniRef:UniRef100_A5U836,UniRef:UniRef50_K0K0W2,UniRef:UniRef90_A5U836
contig_1	Pyrodigal	gene	3769179	3769547	.	-	.	ID=GCA000153685_03537_gene;locus_tag=GCA000153685_03537
contig_1	Pyrodigal	CDS	3769179	3769547	.	-	0	ID=GCA000153685_03537;Name=DUF742 domain-containing protein;locus_tag=GCA000153685_03537;product=DUF742 domain-containing protein;Parent=GCA000153685_03537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417772.1,SO:0001217,UniParc:UPI00000D10DA,UniRef:UniRef100_O50392,UniRef:UniRef50_Q73U98,UniRef:UniRef90_O50392
contig_1	Pyrodigal	gene	3769525	3769917	.	-	.	ID=GCA000153685_03538_gene;locus_tag=GCA000153685_03538
contig_1	Pyrodigal	CDS	3769525	3769917	.	-	0	ID=GCA000153685_03538;Name=Serine protease inhibitor Rv3364c;locus_tag=GCA000153685_03538;product=Serine protease inhibitor Rv3364c;Dbxref=GO:0004867,GO:0005576,GO:0005829,GO:0030430;Parent=GCA000153685_03538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07131,RefSeq:WP_003417776.1,SO:0001217,UniParc:UPI00000D1076,UniRef:UniRef100_O50393,UniRef:UniRef50_O50393,UniRef:UniRef90_O50393
contig_1	Pyrodigal	gene	3769914	3772538	.	-	.	ID=GCA000153685_03539_gene;locus_tag=GCA000153685_03539
contig_1	Pyrodigal	CDS	3769914	3772538	.	-	0	ID=GCA000153685_03539;Name=histidine kinase;locus_tag=GCA000153685_03539;product=histidine kinase;Parent=GCA000153685_03539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00031CE088,UniRef:UniRef100_Q93IG6,UniRef:UniRef50_Q93IG6,UniRef:UniRef90_Q93IG6
contig_1	Pyrodigal	gene	3772780	3773244	.	+	.	ID=GCA000153685_03540_gene;locus_tag=GCA000153685_03540
contig_1	Pyrodigal	CDS	3772780	3773244	.	+	0	ID=GCA000153685_03540;Name=Putative tRNA (cytidine(34)-2'-O)-methyltransferase;locus_tag=GCA000153685_03540;product=Putative tRNA (cytidine(34)-2'-O)-methyltransferase;Parent=GCA000153685_03540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03216,RefSeq:WP_003417878.1,SO:0001217,UniParc:UPI00000D5EAB,UniRef:UniRef100_A0A655AX67,UniRef:UniRef50_A1WBM9,UniRef:UniRef90_A0A7I7MSC4;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	3773611	3775386	.	+	.	ID=GCA000153685_03541_gene;locus_tag=GCA000153685_03541
contig_1	Pyrodigal	CDS	3773611	3775386	.	+	0	ID=GCA000153685_03541;Name=PE domain-containing protein;locus_tag=GCA000153685_03541;product=PE domain-containing protein;Parent=GCA000153685_03541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938654.1,SO:0001217,UniParc:UPI0000EF4864,UniRef:UniRef100_Q8VJ19,UniRef:UniRef50_A0A164AAF5,UniRef:UniRef90_A0A829C5U0
contig_1	Pyrodigal	gene	3775387	3776031	.	-	.	ID=GCA000153685_03542_gene;locus_tag=GCA000153685_03542
contig_1	Pyrodigal	CDS	3775387	3776031	.	-	0	ID=GCA000153685_03542;Name=putative oxidoreductase;locus_tag=GCA000153685_03542;product=putative oxidoreductase;Parent=GCA000153685_03542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417881.1,SO:0001217,UniParc:UPI00000D5F73,UniRef:UniRef100_O50397,UniRef:UniRef50_A0A1S1LC52,UniRef:UniRef90_O50397
contig_1	Pyrodigal	gene	3776054	3776464	.	+	.	ID=GCA000153685_03543_gene;locus_tag=GCA000153685_03543
contig_1	Pyrodigal	CDS	3776054	3776464	.	+	0	ID=GCA000153685_03543;Name=Conserved protein;locus_tag=GCA000153685_03543;product=Conserved protein;Parent=GCA000153685_03543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912209.1,SO:0001217,UniParc:UPI0001E61D5C,UniRef:UniRef100_O50398,UniRef:UniRef50_O50398,UniRef:UniRef90_O50398
contig_1	Pyrodigal	gene	3776407	3776556	.	-	.	ID=GCA000153685_03544_gene;locus_tag=GCA000153685_03544
contig_1	Pyrodigal	CDS	3776407	3776556	.	-	0	ID=GCA000153685_03544;Name=hypothetical protein;locus_tag=GCA000153685_03544;product=hypothetical protein;Parent=GCA000153685_03544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A1FCBA,UniRef:UniRef100_A0A0E8WN14,UniRef:UniRef50_A0A0E8WN14,UniRef:UniRef90_A0A0E8WN14
contig_1	Pyrodigal	gene	3776553	3779792	.	-	.	ID=GCA000153685_03545_gene;locus_tag=GCA000153685_03545;gene=dnaE2
contig_1	Pyrodigal	CDS	3776553	3779792	.	-	0	ID=GCA000153685_03545;Name=error-prone DNA polymerase DnaE2;locus_tag=GCA000153685_03545;product=error-prone DNA polymerase DnaE2;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0005886,GO:0006260,GO:0006281,GO:0008408,GO:0009274,GO:0042276,GO:0046677;gene=dnaE2;Parent=GCA000153685_03545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417885,KEGG:K14162,RefSeq:WP_003908228.1,SO:0001217,UniParc:UPI0000165359,UniRef:UniRef100_P9WNT5,UniRef:UniRef50_P9WNT5,UniRef:UniRef90_P9WNT5;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3779984	3781324	.	+	.	ID=GCA000153685_03546_gene;locus_tag=GCA000153685_03546
contig_1	Pyrodigal	CDS	3779984	3781324	.	+	0	ID=GCA000153685_03546;Name=diacyglycerol O-acyltransferase;locus_tag=GCA000153685_03546;product=diacyglycerol O-acyltransferase;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0009274,GO:0019432,GO:0051701,GO:0071731;Parent=GCA000153685_03546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900036,RefSeq:WP_003900036.1,SO:0001217,UniParc:UPI000013C236,UniRef:UniRef100_P9WKA9,UniRef:UniRef50_P9WKA9,UniRef:UniRef90_P9WKA9;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3781366	3782541	.	+	.	ID=GCA000153685_03547_gene;locus_tag=GCA000153685_03547;gene=otsB
contig_1	Pyrodigal	CDS	3781366	3782541	.	+	0	ID=GCA000153685_03547;Name=trehalose-phosphatase;locus_tag=GCA000153685_03547;product=trehalose-phosphatase;Dbxref=GO:0004805,GO:0005992,GO:0046872;gene=otsB;Parent=GCA000153685_03547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417892.1,SO:0001217,UniParc:UPI00000D5F52,UniRef:UniRef100_P9WFZ5,UniRef:UniRef50_P9WFZ5,UniRef:UniRef90_P9WFZ5;ec_number=3.1.3.12
contig_1	Pyrodigal	gene	3782595	3782699	.	+	.	ID=GCA000153685_03548_gene;locus_tag=GCA000153685_03548
contig_1	Pyrodigal	CDS	3782595	3782699	.	+	0	ID=GCA000153685_03548;Name=PE domain-containing protein;locus_tag=GCA000153685_03548;product=PE domain-containing protein;Parent=GCA000153685_03548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417895.1,SO:0001217,UniParc:UPI000169A5E1,UniRef:UniRef100_Q8VJ18,UniRef:UniRef50_Q8VJ18,UniRef:UniRef90_Q8VJ18
contig_1	Pyrodigal	gene	3782793	3783419	.	+	.	ID=GCA000153685_03549_gene;locus_tag=GCA000153685_03549
contig_1	Pyrodigal	CDS	3782793	3783419	.	+	0	ID=GCA000153685_03549;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_03549;product=Enoyl-CoA hydratase;Parent=GCA000153685_03549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938655.1,SO:0001217,UniParc:UPI00005EE829,UniRef:UniRef100_A0A0H3LFN1,UniRef:UniRef50_A0A917FTD0,UniRef:UniRef90_A0A0H3LFN1
contig_1	Pyrodigal	gene	3783423	3783668	.	+	.	ID=GCA000153685_03550_gene;locus_tag=GCA000153685_03550
contig_1	Pyrodigal	CDS	3783423	3783668	.	+	0	ID=GCA000153685_03550;Name=Enoyl-CoA hydratase;locus_tag=GCA000153685_03550;product=Enoyl-CoA hydratase;Parent=GCA000153685_03550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169D6D6,UniRef:UniRef100_A0A0H3LLM9,UniRef:UniRef50_A0A0H3LLM9,UniRef:UniRef90_A0A0H3LLM9
contig_1	Pyrodigal	gene	3783661	3785100	.	+	.	ID=GCA000153685_03551_gene;locus_tag=GCA000153685_03551;gene=amiD
contig_1	Pyrodigal	CDS	3783661	3785100	.	+	0	ID=GCA000153685_03551;Name=Putative amidase AmiD;locus_tag=GCA000153685_03551;product=Putative amidase AmiD;Dbxref=GO:0004040,GO:0005829;gene=amiD;Parent=GCA000153685_03551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61FC1,UniRef:UniRef100_P9WQ93,UniRef:UniRef50_P9WQ93,UniRef:UniRef90_P9WQ93;ec_number=3.5.1.4
contig_1	Pyrodigal	gene	3785208	3785861	.	+	.	ID=GCA000153685_03552_gene;locus_tag=GCA000153685_03552
contig_1	Pyrodigal	CDS	3785208	3785861	.	+	0	ID=GCA000153685_03552;Name=Phosphatase Rv3376;locus_tag=GCA000153685_03552;product=Phosphatase Rv3376;Dbxref=GO:0016791;Parent=GCA000153685_03552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417903.1,SO:0001217,UniParc:UPI00000D5E24,UniRef:UniRef100_P9WMS5,UniRef:UniRef50_P9WMS5,UniRef:UniRef90_P9WMS5;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3785900	3787405	.	-	.	ID=GCA000153685_03553_gene;locus_tag=GCA000153685_03553
contig_1	Pyrodigal	CDS	3785900	3787405	.	-	0	ID=GCA000153685_03553;Name=type B diterpene cyclase;locus_tag=GCA000153685_03553;product=type B diterpene cyclase;Dbxref=GO:0000287,GO:0010333,GO:0010350,GO:0033385,GO:0035439,GO:0035440,GO:0052572;Parent=GCA000153685_03553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417905,KEGG:K17811,RefSeq:WP_003417905.1,SO:0001217,UniParc:UPI00000D4F72,UniRef:UniRef100_O50406,UniRef:UniRef50_O50406,UniRef:UniRef90_O50406;ec_number=5.5.1.16
contig_1	Pyrodigal	gene	3787410	3788300	.	-	.	ID=GCA000153685_03554_gene;locus_tag=GCA000153685_03554
contig_1	Pyrodigal	CDS	3787410	3788300	.	-	0	ID=GCA000153685_03554;Name=diterpene synthase;locus_tag=GCA000153685_03554;product=diterpene synthase;Dbxref=GO:0016102,GO:0016765,GO:0016791,GO:0035440,GO:0052572,GO:0062204;Parent=GCA000153685_03554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417908,KEGG:K15911,RefSeq:WP_003417908.1,SO:0001217,UniParc:UPI00000D1176,UniRef:UniRef100_P9WJ61,UniRef:UniRef50_P9WJ61,UniRef:UniRef90_P9WJ61;ec_number=2.5.1.153
contig_1	Pyrodigal	gene	3788309	3789919	.	-	.	ID=GCA000153685_03555_gene;locus_tag=GCA000153685_03555;gene=dxs
contig_1	Pyrodigal	CDS	3788309	3789919	.	-	0	ID=GCA000153685_03555;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA000153685_03555;product=1-deoxy-D-xylulose-5-phosphate synthase;Dbxref=GO:0005737,GO:0008615,GO:0008661,GO:0009228,GO:0009240;gene=dxs;Parent=GCA000153685_03555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01662,RefSeq:WP_003417910.1,SO:0001217,UniParc:UPI00000C152B,UniRef:UniRef100_O50408,UniRef:UniRef50_B2HKN8,UniRef:UniRef90_A0A0E8VEB1;ec_number=2.2.1.7
contig_1	Pyrodigal	gene	3789864	3790145	.	-	.	ID=GCA000153685_03556_gene;locus_tag=GCA000153685_03556
contig_1	Pyrodigal	CDS	3789864	3790145	.	-	0	ID=GCA000153685_03556;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA000153685_03556;product=1-deoxy-D-xylulose-5-phosphate synthase;Parent=GCA000153685_03556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003914149.1,SO:0001217,UniParc:UPI000169A5E4,UniRef:UniRef100_A0A0E8U145,UniRef:UniRef50_A0A0E8U145,UniRef:UniRef90_A0A0E8U145
contig_1	Pyrodigal	gene	3790142	3791131	.	-	.	ID=GCA000153685_03557_gene;locus_tag=GCA000153685_03557;gene=ispH
contig_1	Pyrodigal	CDS	3790142	3791131	.	-	0	ID=GCA000153685_03557;Name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;locus_tag=GCA000153685_03557;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;Dbxref=GO:0016114,GO:0019288,GO:0046872,GO:0050992,GO:0051539,GO:0051745;gene=ispH;Parent=GCA000153685_03557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03527,RefSeq:WP_003417912.1,SO:0001217,UniParc:UPI000012D8ED,UniRef:UniRef100_P9WKF9,UniRef:UniRef50_P9WKF9,UniRef:UniRef90_P9WKF9;ec_number=1.17.7.4
contig_1	Pyrodigal	gene	3791131	3792183	.	-	.	ID=GCA000153685_03558_gene;locus_tag=GCA000153685_03558;gene=idsB
contig_1	Pyrodigal	CDS	3791131	3792183	.	-	0	ID=GCA000153685_03558;Name=geranylgeranyl diphosphate synthase IdsB;locus_tag=GCA000153685_03558;product=geranylgeranyl diphosphate synthase IdsB;Dbxref=GO:0004311,GO:0004659,GO:0005829,GO:0008299,GO:0033386,GO:0046872;gene=idsB;Parent=GCA000153685_03558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13787,RefSeq:WP_003900678.1,SO:0001217,UniParc:UPI00001A9211,UniRef:UniRef100_Q8VJ17,UniRef:UniRef50_O50410,UniRef:UniRef90_O50410;ec_number=2.5.1.29
contig_1	Pyrodigal	gene	3792812	3793000	.	+	.	ID=GCA000153685_03559_gene;locus_tag=GCA000153685_03559;gene=emrE
contig_1	Pyrodigal	CDS	3792812	3793000	.	+	0	ID=GCA000153685_03559;Name=EmrE;locus_tag=GCA000153685_03559;product=EmrE;gene=emrE;Parent=GCA000153685_03559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004B0B5EC,UniRef:UniRef100_A0A0E7ZGQ8,UniRef:UniRef50_A0A0E7ZGQ8,UniRef:UniRef90_A0A0E7ZGQ8
contig_1	Pyrodigal	gene	3792937	3793329	.	-	.	ID=GCA000153685_03560_gene;locus_tag=GCA000153685_03560;gene=vapC46
contig_1	Pyrodigal	CDS	3792937	3793329	.	-	0	ID=GCA000153685_03560;Name=Ribonuclease VapC46;locus_tag=GCA000153685_03560;product=Ribonuclease VapC46;Dbxref=GO:0000287,GO:0004540,GO:0005886,GO:0045926;gene=vapC46;Parent=GCA000153685_03560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417916.1,SO:0001217,UniParc:UPI000016535A,UniRef:UniRef100_O50411,UniRef:UniRef50_O50411,UniRef:UniRef90_O50411;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3793329	3793604	.	-	.	ID=GCA000153685_03561_gene;locus_tag=GCA000153685_03561;gene=vapB46
contig_1	Pyrodigal	CDS	3793329	3793604	.	-	0	ID=GCA000153685_03561;Name=Antitoxin VapB46;locus_tag=GCA000153685_03561;product=Antitoxin VapB46;Dbxref=GO:0045927,GO:0097351;gene=vapB46;Parent=GCA000153685_03561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912214.1,SO:0001217,UniParc:UPI00005EE82E,UniRef:UniRef100_P9WF13,UniRef:UniRef50_P9WF13,UniRef:UniRef90_P9WF13
contig_1	Pyrodigal	gene	3793711	3794490	.	+	.	ID=GCA000153685_03562_gene;locus_tag=GCA000153685_03562
contig_1	Pyrodigal	CDS	3793711	3794490	.	+	0	ID=GCA000153685_03562;Name=putative transposase;locus_tag=GCA000153685_03562;product=putative transposase;Parent=GCA000153685_03562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE82F,UniRef:UniRef100_A0A0H3LFN7,UniRef:UniRef50_O50413,UniRef:UniRef90_O50413
contig_1	Pyrodigal	gene	3794480	3795157	.	+	.	ID=GCA000153685_03563_gene;locus_tag=GCA000153685_03563
contig_1	Pyrodigal	CDS	3794480	3795157	.	+	0	ID=GCA000153685_03563;Name=putative transposase;locus_tag=GCA000153685_03563;product=putative transposase;Parent=GCA000153685_03563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417923.1,SO:0001217,UniParc:UPI00000D5E20,UniRef:UniRef100_O50414,UniRef:UniRef50_A0A498QYX8,UniRef:UniRef90_O50414
contig_1	Pyrodigal	gene	3795347	3797542	.	+	.	ID=GCA000153685_03564_gene;locus_tag=GCA000153685_03564
contig_1	Pyrodigal	CDS	3795347	3797542	.	+	0	ID=GCA000153685_03564;Name=PE-PGRS family protein PE_PGRS52;locus_tag=GCA000153685_03564;product=PE-PGRS family protein PE_PGRS52;Parent=GCA000153685_03564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886168.1,SO:0001217,UniParc:UPI00000D3ADA,UniRef:UniRef100_Q6MWX5,UniRef:UniRef50_Q6MWX5,UniRef:UniRef90_Q6MWX5
contig_1	Pyrodigal	gene	3797613	3798485	.	-	.	ID=GCA000153685_03565_gene;locus_tag=GCA000153685_03565;gene=htdY
contig_1	Pyrodigal	CDS	3797613	3798485	.	-	0	ID=GCA000153685_03565;Name=3-hydroxyacyl-thioester dehydratase HtdY;locus_tag=GCA000153685_03565;product=3-hydroxyacyl-thioester dehydratase HtdY;Dbxref=GO:0003857,GO:0004300,GO:0006635,GO:0044594;gene=htdY;Parent=GCA000153685_03565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417929,RefSeq:WP_003417929.1,SO:0001217,UniParc:UPI00000D1240,UniRef:UniRef100_I6YBZ8,UniRef:UniRef50_I6YBZ8,UniRef:UniRef90_I6YBZ8;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3798559	3799269	.	+	.	ID=GCA000153685_03566_gene;locus_tag=GCA000153685_03566;gene=lpqD
contig_1	Pyrodigal	CDS	3798559	3799269	.	+	0	ID=GCA000153685_03566;Name=Lipoprotein LpqD;locus_tag=GCA000153685_03566;product=Lipoprotein LpqD;gene=lpqD;Parent=GCA000153685_03566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417932.1,SO:0001217,UniParc:UPI00000D4F73,UniRef:UniRef100_A5U864,UniRef:UniRef50_A0A2C9T3C4,UniRef:UniRef90_A5U864
contig_1	Pyrodigal	gene	3799315	3801267	.	+	.	ID=GCA000153685_03567_gene;locus_tag=GCA000153685_03567
contig_1	Pyrodigal	CDS	3799315	3801267	.	+	0	ID=GCA000153685_03567;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03567;product=SDR family oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_03567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417940.1,SO:0001217,UniParc:UPI00000D5E1B,UniRef:UniRef100_O50417,UniRef:UniRef50_A0A378TAT5,UniRef:UniRef90_O50417
contig_1	Pyrodigal	gene	3801268	3802131	.	-	.	ID=GCA000153685_03568_gene;locus_tag=GCA000153685_03568;gene=cmaA1
contig_1	Pyrodigal	CDS	3801268	3802131	.	-	0	ID=GCA000153685_03568;Name=cyclopropane mycolic acid synthase family methyltransferase;locus_tag=GCA000153685_03568;product=cyclopropane mycolic acid synthase family methyltransferase;Dbxref=GO:0005737,GO:0005886,GO:0008610,GO:0008825,GO:0032259,GO:0046500,GO:0071768;gene=cmaA1;Parent=GCA000153685_03568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26597,RefSeq:WP_003900041.1,SO:0001217,UniParc:UPI0000112210,UniRef:UniRef100_P9WPB7,UniRef:UniRef50_P9WPB7,UniRef:UniRef90_P9WPB7;ec_number=2.1.1.79
contig_1	Pyrodigal	gene	3802155	3803081	.	+	.	ID=GCA000153685_03569_gene;locus_tag=GCA000153685_03569;gene=iunH
contig_1	Pyrodigal	CDS	3802155	3803081	.	+	0	ID=GCA000153685_03569;Name=nucleoside hydrolase IunH;locus_tag=GCA000153685_03569;product=nucleoside hydrolase IunH;gene=iunH;Parent=GCA000153685_03569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417946,RefSeq:WP_003417946.1,SO:0001217,UniParc:UPI00000D6050,UniRef:UniRef100_A5U867,UniRef:UniRef50_A0A378W561,UniRef:UniRef90_A0A655JNU3
contig_1	Pyrodigal	gene	3803136	3804716	.	-	.	ID=GCA000153685_03570_gene;locus_tag=GCA000153685_03570;gene=umuC
contig_1	Pyrodigal	CDS	3803136	3804716	.	-	0	ID=GCA000153685_03570;Name=UmuC domain-containing protein;locus_tag=GCA000153685_03570;product=UmuC domain-containing protein;gene=umuC;Parent=GCA000153685_03570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14161,SO:0001217,UniParc:UPI00005EE833,UniRef:UniRef100_O50419,UniRef:UniRef50_O50419,UniRef:UniRef90_O50419
contig_1	Pyrodigal	gene	3804716	3805258	.	-	.	ID=GCA000153685_03571_gene;locus_tag=GCA000153685_03571
contig_1	Pyrodigal	CDS	3804716	3805258	.	-	0	ID=GCA000153685_03571;Name=putative protein Rv3395c;locus_tag=GCA000153685_03571;product=putative protein Rv3395c;Dbxref=GO:0006281,GO:0016020;Parent=GCA000153685_03571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004B8CAE6,UniRef:UniRef100_P9WKZ9,UniRef:UniRef50_P9WKZ9,UniRef:UniRef90_P9WKZ9
contig_1	Pyrodigal	gene	3805329	3806039	.	+	.	ID=GCA000153685_03572_gene;locus_tag=GCA000153685_03572
contig_1	Pyrodigal	CDS	3805329	3806039	.	+	0	ID=GCA000153685_03572;Name=Secreted protein;locus_tag=GCA000153685_03572;product=Secreted protein;Parent=GCA000153685_03572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900680.1,SO:0001217,UniParc:UPI00005EE834,UniRef:UniRef100_Q8VJ14,UniRef:UniRef50_Q8VJ14,UniRef:UniRef90_Q8VJ14
contig_1	Pyrodigal	gene	3806195	3807724	.	-	.	ID=GCA000153685_03573_gene;locus_tag=GCA000153685_03573;gene=guaA
contig_1	Pyrodigal	CDS	3806195	3807724	.	-	0	ID=GCA000153685_03573;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000153685_03573;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0009274,GO:0016462;gene=guaA;Parent=GCA000153685_03573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01951,SO:0001217,UniParc:UPI0004F2944F,UniRef:UniRef100_A0A654ZX32,UniRef:UniRef50_P9WMS7,UniRef:UniRef90_P9WMS7;ec_number=6.3.5.2
contig_1	Pyrodigal	gene	3807784	3808692	.	-	.	ID=GCA000153685_03574_gene;locus_tag=GCA000153685_03574;gene=hpnD
contig_1	Pyrodigal	CDS	3807784	3808692	.	-	0	ID=GCA000153685_03574;Name=presqualene diphosphate synthase HpnD;locus_tag=GCA000153685_03574;product=presqualene diphosphate synthase HpnD;Dbxref=GO:0004311,GO:0016117,GO:0016767,GO:0046872,GO:0051996;gene=hpnD;Parent=GCA000153685_03574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417954.1,SO:0001217,UniParc:UPI0000128490,UniRef:UniRef100_P9WHP3,UniRef:UniRef50_P9WHP3,UniRef:UniRef90_P9WHP3;ec_number=2.5.1.103
contig_1	Pyrodigal	gene	3808721	3809800	.	-	.	ID=GCA000153685_03575_gene;locus_tag=GCA000153685_03575;gene=idsA1
contig_1	Pyrodigal	CDS	3808721	3809800	.	-	0	ID=GCA000153685_03575;Name=(2E%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA000153685_03575;product=(2E%2C6E)-farnesyl diphosphate synthase;Dbxref=GO:0000287,GO:0004161,GO:0004337,GO:0004659,GO:0005506,GO:0005737,GO:0008299,GO:0030145,GO:0033384,GO:0033386,GO:0045337;gene=idsA1;Parent=GCA000153685_03575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003417957,KEGG:K13787,RefSeq:WP_003417957.1,SO:0001217,UniParc:UPI000012B3FC,UniRef:UniRef100_P9WKH1,UniRef:UniRef50_P9WKH1,UniRef:UniRef90_P9WKH1;ec_number=2.5.1.10
contig_1	Pyrodigal	gene	3809949	3810869	.	+	.	ID=GCA000153685_03576_gene;locus_tag=GCA000153685_03576
contig_1	Pyrodigal	CDS	3809949	3810869	.	+	0	ID=GCA000153685_03576;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_3469;locus_tag=GCA000153685_03576;product=Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_3469;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_03576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912218.1,SO:0001217,UniParc:UPI00005EE835,UniRef:UniRef100_P9WFH0,UniRef:UniRef50_P9WFI7,UniRef:UniRef90_P9WFH1;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	3810933	3811721	.	+	.	ID=GCA000153685_03577_gene;locus_tag=GCA000153685_03577
contig_1	Pyrodigal	CDS	3810933	3811721	.	+	0	ID=GCA000153685_03577;Name=Beta-phosphoglucomutase;locus_tag=GCA000153685_03577;product=Beta-phosphoglucomutase;Dbxref=GO:0016853,GO:0046872;Parent=GCA000153685_03577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417961.1,SO:0001217,UniParc:UPI000013C254,UniRef:UniRef100_P9WKZ7,UniRef:UniRef50_P9WKZ7,UniRef:UniRef90_P9WKZ7;ec_number=5.4.2.6
contig_1	Pyrodigal	gene	3811736	3814096	.	+	.	ID=GCA000153685_03578_gene;locus_tag=GCA000153685_03578;gene=aTH1
contig_1	Pyrodigal	CDS	3811736	3814096	.	+	0	ID=GCA000153685_03578;Name=putative glycosyl hydrolase Rv3401;locus_tag=GCA000153685_03578;product=putative glycosyl hydrolase Rv3401;Dbxref=GO:0004553,GO:0005886,GO:0005975,GO:0030246;gene=aTH1;Parent=GCA000153685_03578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1554,COG:G,KEGG:K05342,RefSeq:WP_003900047.1,SO:0001217,UniParc:UPI000013C257,UniRef:UniRef100_P9WN13,UniRef:UniRef50_P9WN13,UniRef:UniRef90_P9WN13;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	3814142	3814354	.	-	.	ID=GCA000153685_03579_gene;locus_tag=GCA000153685_03579
contig_1	Pyrodigal	CDS	3814142	3814354	.	-	0	ID=GCA000153685_03579;Name=hypothetical protein;locus_tag=GCA000153685_03579;product=hypothetical protein;Parent=GCA000153685_03579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456508.1,SO:0001217,UniParc:UPI000252D310,UniRef:UniRef100_A0A0H3LEJ7,UniRef:UniRef50_A0A0H3LEJ7,UniRef:UniRef90_A0A0H3LEJ7
contig_1	Pyrodigal	gene	3814347	3815585	.	-	.	ID=GCA000153685_03580_gene;locus_tag=GCA000153685_03580
contig_1	Pyrodigal	CDS	3814347	3815585	.	-	0	ID=GCA000153685_03580;Name=Protein Rv3402c;locus_tag=GCA000153685_03580;product=Protein Rv3402c;Dbxref=GO:0000271,GO:0005576,GO:0008483,GO:0010106,GO:0030170,GO:0052572;Parent=GCA000153685_03580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900048.1,SO:0001217,UniParc:UPI000013C259,UniRef:UniRef100_P9WGJ7,UniRef:UniRef50_P9WGJ7,UniRef:UniRef90_P9WGJ7
contig_1	Pyrodigal	gene	3815956	3817557	.	-	.	ID=GCA000153685_03581_gene;locus_tag=GCA000153685_03581
contig_1	Pyrodigal	CDS	3815956	3817557	.	-	0	ID=GCA000153685_03581;Name=putative protein Rv3403c;locus_tag=GCA000153685_03581;product=putative protein Rv3403c;Dbxref=GO:0005886;Parent=GCA000153685_03581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003417969.1,SO:0001217,UniParc:UPI000013C25C,UniRef:UniRef100_P9WKZ5,UniRef:UniRef50_P9WKZ5,UniRef:UniRef90_P9WKZ5
contig_1	Pyrodigal	gene	3817574	3818278	.	-	.	ID=GCA000153685_03582_gene;locus_tag=GCA000153685_03582
contig_1	Pyrodigal	CDS	3817574	3818278	.	-	0	ID=GCA000153685_03582;Name=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;locus_tag=GCA000153685_03582;product=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;Dbxref=GO:0004479,GO:0005829,GO:0016742,GO:0042803,GO:0071951;Parent=GCA000153685_03582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22885,RefSeq:WP_003417980.1,SO:0001217,UniParc:UPI000013C25E,UniRef:UniRef100_P9WKZ3,UniRef:UniRef50_P9WKZ3,UniRef:UniRef90_P9WKZ3;ec_number=2.1.2.-
contig_1	Pyrodigal	gene	3818396	3818962	.	-	.	ID=GCA000153685_03583_gene;locus_tag=GCA000153685_03583
contig_1	Pyrodigal	CDS	3818396	3818962	.	-	0	ID=GCA000153685_03583;Name=HTH-type transcriptional repressor Rv3405c;locus_tag=GCA000153685_03583;product=HTH-type transcriptional repressor Rv3405c;Dbxref=GO:0000976,GO:0003700,GO:0006355;Parent=GCA000153685_03583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22295,RefSeq:WP_003417984.1,SO:0001217,UniParc:UPI000013C260,UniRef:UniRef100_P9WMC3,UniRef:UniRef50_P9WMC3,UniRef:UniRef90_P9WMC3
contig_1	Pyrodigal	gene	3819024	3819911	.	+	.	ID=GCA000153685_03584_gene;locus_tag=GCA000153685_03584
contig_1	Pyrodigal	CDS	3819024	3819911	.	+	0	ID=GCA000153685_03584;Name=alpha-ketoglutarate-dependent sulfate ester dioxygenase;locus_tag=GCA000153685_03584;product=alpha-ketoglutarate-dependent sulfate ester dioxygenase;Dbxref=GO:0005737,GO:0005886,GO:0016706,GO:0046677,GO:0046872;Parent=GCA000153685_03584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900050,KEGG:K22303,RefSeq:WP_003900050.1,SO:0001217,UniParc:UPI000013C263,UniRef:UniRef100_P9WKZ1,UniRef:UniRef50_P9WKZ1,UniRef:UniRef90_P9WKZ1;ec_number=1.14.11.77
contig_1	Pyrodigal	gene	3820069	3820245	.	+	.	ID=GCA000153685_03585_gene;locus_tag=GCA000153685_03585
contig_1	Pyrodigal	CDS	3820069	3820245	.	+	0	ID=GCA000153685_03585;Name=Antitoxin VapB47;locus_tag=GCA000153685_03585;product=Antitoxin VapB47;Parent=GCA000153685_03585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015456509.1,SO:0001217,UniParc:UPI00005EE837,UniRef:UniRef100_A0A0H3LEM3,UniRef:UniRef50_A0A0H3LEM3,UniRef:UniRef90_A0A0H3LEM3
contig_1	Pyrodigal	gene	3820251	3820652	.	+	.	ID=GCA000153685_03586_gene;locus_tag=GCA000153685_03586;gene=vapC47
contig_1	Pyrodigal	CDS	3820251	3820652	.	+	0	ID=GCA000153685_03586;Name=Ribonuclease VapC47;locus_tag=GCA000153685_03586;product=Ribonuclease VapC47;Dbxref=GO:0000287,GO:0004540,GO:0017148,GO:0045926;gene=vapC47;Parent=GCA000153685_03586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001651A7,UniRef:UniRef100_P9WF48,UniRef:UniRef50_P9WF49,UniRef:UniRef90_P9WF49;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	3820685	3822421	.	-	.	ID=GCA000153685_03587_gene;locus_tag=GCA000153685_03587;gene=choD
contig_1	Pyrodigal	CDS	3820685	3822421	.	-	0	ID=GCA000153685_03587;Name=cholesterol oxidase;locus_tag=GCA000153685_03587;product=cholesterol oxidase;Dbxref=GO:0004769,GO:0005576,GO:0006707,GO:0016995,GO:0050660;gene=choD;Parent=GCA000153685_03587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418002,KEGG:K03333,RefSeq:WP_003418002.1,SO:0001217,UniParc:UPI00000D123C,UniRef:UniRef100_P9WMV9,UniRef:UniRef50_P9WMV9,UniRef:UniRef90_P9WMV9;ec_number=1.1.3.6
contig_1	Pyrodigal	gene	3822477	3823604	.	-	.	ID=GCA000153685_03588_gene;locus_tag=GCA000153685_03588;gene=guaB3
contig_1	Pyrodigal	CDS	3822477	3823604	.	-	0	ID=GCA000153685_03588;Name=GuaB3 family IMP dehydrogenase-related protein;locus_tag=GCA000153685_03588;product=GuaB3 family IMP dehydrogenase-related protein;Dbxref=GO:0003938,GO:0006183;gene=guaB3;Parent=GCA000153685_03588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0516,COG:F,RefSeq:WP_003418005.1,SO:0001217,UniParc:UPI000013C26C,UniRef:UniRef100_P9WKI5,UniRef:UniRef50_P9WKI5,UniRef:UniRef90_P9WKI5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3823624	3825213	.	-	.	ID=GCA000153685_03589_gene;locus_tag=GCA000153685_03589;gene=guaB
contig_1	Pyrodigal	CDS	3823624	3825213	.	-	0	ID=GCA000153685_03589;Name=IMP dehydrogenase;locus_tag=GCA000153685_03589;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0005886,GO:0006164,GO:0006177,GO:0006183,GO:0006204,GO:0009274,GO:0046872,GO:0097293;gene=guaB;Parent=GCA000153685_03589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2905,COG:T,KEGG:K00088,RefSeq:WP_003900682.1,SO:0001217,UniParc:UPI000012D60F,UniRef:UniRef100_P9WKI7,UniRef:UniRef50_P9WKI7,UniRef:UniRef90_P9WKI7;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	3825420	3825830	.	+	.	ID=GCA000153685_03590_gene;locus_tag=GCA000153685_03590
contig_1	Pyrodigal	CDS	3825420	3825830	.	+	0	ID=GCA000153685_03590;Name=putative protein Mb3446;locus_tag=GCA000153685_03590;product=putative protein Mb3446;Parent=GCA000153685_03590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418008.1,SO:0001217,UniParc:UPI000013C270,UniRef:UniRef100_P9WKY9,UniRef:UniRef50_P9WKY9,UniRef:UniRef90_P9WKY9
contig_1	Pyrodigal	gene	3825840	3826739	.	-	.	ID=GCA000153685_03591_gene;locus_tag=GCA000153685_03591;gene=rsdA
contig_1	Pyrodigal	CDS	3825840	3826739	.	-	0	ID=GCA000153685_03591;Name=anti-sigma D factor RsdA;locus_tag=GCA000153685_03591;product=anti-sigma D factor RsdA;Dbxref=GO:0005576,GO:0005886;gene=rsdA;Parent=GCA000153685_03591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418011,RefSeq:WP_003418011.1,SO:0001217,UniParc:UPI000013C272,UniRef:UniRef100_P9WJ71,UniRef:UniRef50_P9WJ71,UniRef:UniRef90_P9WJ71
contig_1	Pyrodigal	gene	3826732	3827307	.	-	.	ID=GCA000153685_03592_gene;locus_tag=GCA000153685_03592;gene=sigD
contig_1	Pyrodigal	CDS	3826732	3827307	.	-	0	ID=GCA000153685_03592;Name=ECF RNA polymerase sigma factor SigD;locus_tag=GCA000153685_03592;product=ECF RNA polymerase sigma factor SigD;Dbxref=GO:0003677,GO:0006352,GO:0006355,GO:0009408,GO:0016987;gene=sigD;Parent=GCA000153685_03592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917787,RefSeq:WP_003917787.1,SO:0001217,UniParc:UPI0001FB6AE6,UniRef:UniRef100_P9WGG9,UniRef:UniRef50_P9WGG9,UniRef:UniRef90_P9WGG9
contig_1	Pyrodigal	gene	3827388	3828179	.	-	.	ID=GCA000153685_03593_gene;locus_tag=GCA000153685_03593;gene=luxR
contig_1	Pyrodigal	CDS	3827388	3828179	.	-	0	ID=GCA000153685_03593;Name=LuxR family transcriptional regulator;locus_tag=GCA000153685_03593;product=LuxR family transcriptional regulator;gene=luxR;Parent=GCA000153685_03593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61E94,UniRef:UniRef100_A0A0H3LFR3,UniRef:UniRef50_A0A2G5PB82,UniRef:UniRef90_I6YG27
contig_1	Pyrodigal	gene	3828586	3828894	.	+	.	ID=GCA000153685_03594_gene;locus_tag=GCA000153685_03594;gene=whiB3
contig_1	Pyrodigal	CDS	3828586	3828894	.	+	0	ID=GCA000153685_03594;Name=redox-responsive transcriptional regulator WhiB3;locus_tag=GCA000153685_03594;product=redox-responsive transcriptional regulator WhiB3;Dbxref=GO:0003677,GO:0005737,GO:0009274,GO:0015035,GO:0019216,GO:0035731,GO:0045454,GO:0045892,GO:0046872,GO:0047134,GO:0051536,GO:0051539,GO:0071766,GO:0075137;gene=whiB3;Parent=GCA000153685_03594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418017,KEGG:K18955,RefSeq:WP_003900683.1,SO:0001217,UniParc:UPI00012781FB,UniRef:UniRef100_UPI00012781FB,UniRef:UniRef50_P9WF41,UniRef:UniRef90_P9WF41
contig_1	Pyrodigal	gene	3828966	3830585	.	-	.	ID=GCA000153685_03595_gene;locus_tag=GCA000153685_03595;gene=groL
contig_1	Pyrodigal	CDS	3828966	3830585	.	-	0	ID=GCA000153685_03595;Name=chaperonin GroEL;locus_tag=GCA000153685_03595;product=chaperonin GroEL;Dbxref=GO:0003697,GO:0005524,GO:0005886,GO:0009274,GO:0009408,GO:0016853,GO:0042026,GO:0042262,GO:0043590,GO:0046872,GO:0051082,GO:0051085,GO:0061077,GO:0090143,GO:0140662,GO:1990220;gene=groL;Parent=GCA000153685_03595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418021.1,SO:0001217,UniParc:UPI000004B6C2,UniRef:UniRef100_P9WPE9,UniRef:UniRef50_P9WPE9,UniRef:UniRef90_P9WPE9;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	3830680	3830982	.	-	.	ID=GCA000153685_03596_gene;locus_tag=GCA000153685_03596;gene=groES
contig_1	Pyrodigal	CDS	3830680	3830982	.	-	0	ID=GCA000153685_03596;Name=co-chaperone GroES;locus_tag=GCA000153685_03596;product=co-chaperone GroES;Dbxref=GO:0005524,GO:0005737,GO:0006457,GO:0016887,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000153685_03596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_003418028.1,SO:0001217,UniParc:UPI000004C098,UniRef:UniRef100_P9WPE5,UniRef:UniRef50_P9WPE5,UniRef:UniRef90_P9WPE5
contig_1	Pyrodigal	gene	3831249	3832283	.	-	.	ID=GCA000153685_03597_gene;locus_tag=GCA000153685_03597;gene=tsaD
contig_1	Pyrodigal	CDS	3831249	3832283	.	-	0	ID=GCA000153685_03597;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000153685_03597;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000153685_03597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900052.1,SO:0001217,UniParc:UPI00000322C2,UniRef:UniRef100_P9WHT7,UniRef:UniRef50_P9WHT7,UniRef:UniRef90_P9WHT7;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	3832280	3832756	.	-	.	ID=GCA000153685_03598_gene;locus_tag=GCA000153685_03598;gene=rimI
contig_1	Pyrodigal	CDS	3832280	3832756	.	-	0	ID=GCA000153685_03598;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000153685_03598;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0004596,GO:0006474,GO:0008999,GO:0036211,GO:0042254,GO:0120518,GO:1990189;gene=rimI;Parent=GCA000153685_03598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418034.1,SO:0001217,UniParc:UPI00000D11EF,UniRef:UniRef100_I6YG32,UniRef:UniRef50_I6YG32,UniRef:UniRef90_I6YG32;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	3832753	3833388	.	-	.	ID=GCA000153685_03599_gene;locus_tag=GCA000153685_03599;gene=tsaB
contig_1	Pyrodigal	CDS	3832753	3833388	.	-	0	ID=GCA000153685_03599;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000153685_03599;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949,GO:0005829,GO:0009274;gene=tsaB;Parent=GCA000153685_03599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418038.1,SO:0001217,UniParc:UPI000013C27B,UniRef:UniRef100_P9WKY7,UniRef:UniRef50_P9WKY7,UniRef:UniRef90_P9WKY7;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	3833385	3833891	.	-	.	ID=GCA000153685_03600_gene;locus_tag=GCA000153685_03600;gene=tsaE
contig_1	Pyrodigal	CDS	3833385	3833891	.	-	0	ID=GCA000153685_03600;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000153685_03600;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949,GO:0005524,GO:0005737,GO:0046872;gene=tsaE;Parent=GCA000153685_03600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418042.1,SO:0001217,UniParc:UPI000013C27D,UniRef:UniRef100_P9WFS7,UniRef:UniRef50_P9WFS7,UniRef:UniRef90_P9WFS7
contig_1	Pyrodigal	gene	3833888	3835114	.	-	.	ID=GCA000153685_03601_gene;locus_tag=GCA000153685_03601;gene=alr
contig_1	Pyrodigal	CDS	3833888	3835114	.	-	0	ID=GCA000153685_03601;Name=alanine racemase;locus_tag=GCA000153685_03601;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000153685_03601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01775,RefSeq:WP_003418047.1,SO:0001217,UniParc:UPI00001651A9,UniRef:UniRef100_P9WQA9,UniRef:UniRef50_P9WQA9,UniRef:UniRef90_P9WQA9;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	3835933	3836469	.	+	.	ID=GCA000153685_03602_gene;locus_tag=GCA000153685_03602;gene=pPE59
contig_1	Pyrodigal	CDS	3835933	3836469	.	+	0	ID=GCA000153685_03602;Name=putative PPE family protein PPE59;locus_tag=GCA000153685_03602;product=putative PPE family protein PPE59;Dbxref=GO:0052572;gene=pPE59;Parent=GCA000153685_03602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900053.1,SO:0001217,UniParc:UPI000013C284,UniRef:UniRef100_P9WHY1,UniRef:UniRef50_Q50703,UniRef:UniRef90_P9WHY1
contig_1	Pyrodigal	gene	3836410	3837573	.	-	.	ID=GCA000153685_03603_gene;locus_tag=GCA000153685_03603
contig_1	Pyrodigal	CDS	3836410	3837573	.	-	0	ID=GCA000153685_03603;Name=IS3 family transposase;locus_tag=GCA000153685_03603;product=IS3 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_03603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418263.1,SO:0001217,UniParc:UPI00000D604A,UniRef:UniRef100_I6YC39,UniRef:UniRef50_I6YC39,UniRef:UniRef90_I6YC39
contig_1	Pyrodigal	gene	3837792	3837956	.	-	.	ID=GCA000153685_03604_gene;locus_tag=GCA000153685_03604
contig_1	Pyrodigal	CDS	3837792	3837956	.	-	0	ID=GCA000153685_03604;Name=Transposase;locus_tag=GCA000153685_03604;product=Transposase;Parent=GCA000153685_03604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418271.1,SO:0001217,UniParc:UPI00005EE841,UniRef:UniRef100_A0A0H3LLT9,UniRef:UniRef50_A0A0H3LLT9,UniRef:UniRef90_A0A0H3LLT9
contig_1	Pyrodigal	gene	3837994	3838098	.	-	.	ID=GCA000153685_03605_gene;locus_tag=GCA000153685_03605
contig_1	Pyrodigal	CDS	3837994	3838098	.	-	0	ID=GCA000153685_03605;Name=hypothetical protein;locus_tag=GCA000153685_03605;product=hypothetical protein;Parent=GCA000153685_03605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42BE,UniRef:UniRef100_A0A0E8VRG1,UniRef:UniRef50_A0A0E8VRG1,UniRef:UniRef90_A0A0E8VRG1
contig_1	Pyrodigal	gene	3838062	3838907	.	-	.	ID=GCA000153685_03606_gene;locus_tag=GCA000153685_03606
contig_1	Pyrodigal	CDS	3838062	3838907	.	-	0	ID=GCA000153685_03606;Name=IS256 family transposase;locus_tag=GCA000153685_03606;product=IS256 family transposase;Dbxref=GO:0004803;Parent=GCA000153685_03606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D604B,UniRef:UniRef100_I6XH73,UniRef:UniRef50_A0A346XWM8,UniRef:UniRef90_I6XH73
contig_1	Pyrodigal	gene	3839140	3840522	.	-	.	ID=GCA000153685_03607_gene;locus_tag=GCA000153685_03607;gene=gadA
contig_1	Pyrodigal	CDS	3839140	3840522	.	-	0	ID=GCA000153685_03607;Name=glutamate decarboxylase;locus_tag=GCA000153685_03607;product=glutamate decarboxylase;Dbxref=GO:0004351,GO:0006540,GO:0030170;gene=gadA;Parent=GCA000153685_03607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0076,COG:E,RefSeq:WP_003418277.1,SO:0001217,UniParc:UPI00000D1117,UniRef:UniRef100_I6YG46,UniRef:UniRef50_A0A806TZS4,UniRef:UniRef90_I6YG46;ec_number=4.1.1.15
contig_1	Pyrodigal	gene	3840560	3841981	.	-	.	ID=GCA000153685_03608_gene;locus_tag=GCA000153685_03608;gene=nnr
contig_1	Pyrodigal	CDS	3840560	3841981	.	-	0	ID=GCA000153685_03608;Name=Bifunctional NAD(P)H-hydrate repair enzyme Nnr;locus_tag=GCA000153685_03608;product=Bifunctional NAD(P)H-hydrate repair enzyme Nnr;Dbxref=GO:0005524,GO:0046496,GO:0046872,GO:0052855,GO:0052856,GO:0110051;gene=nnr;Parent=GCA000153685_03608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23997,RefSeq:WP_003912231.1,SO:0001217,UniParc:UPI000013C287,UniRef:UniRef100_P9WF11,UniRef:UniRef50_P9WF11,UniRef:UniRef90_P9WF11;ec_number=5.1.99.6
contig_1	Pyrodigal	gene	3841983	3842681	.	-	.	ID=GCA000153685_03609_gene;locus_tag=GCA000153685_03609
contig_1	Pyrodigal	CDS	3841983	3842681	.	-	0	ID=GCA000153685_03609;Name=Transmembrane protein;locus_tag=GCA000153685_03609;product=Transmembrane protein;Parent=GCA000153685_03609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912234.1,SO:0001217,UniParc:UPI0001E61E9B,UniRef:UniRef100_A0A0H3LFT5,UniRef:UniRef50_A0A7I9YJD0,UniRef:UniRef90_R4M045
contig_1	Pyrodigal	gene	3842707	3843645	.	-	.	ID=GCA000153685_03610_gene;locus_tag=GCA000153685_03610
contig_1	Pyrodigal	CDS	3842707	3843645	.	-	0	ID=GCA000153685_03610;Name=DUF4436 domain-containing protein;locus_tag=GCA000153685_03610;product=DUF4436 domain-containing protein;Parent=GCA000153685_03610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2D8B,UniRef:UniRef100_Q8VJ08,UniRef:UniRef50_A0A1X1X3H8,UniRef:UniRef90_A5U8B1
contig_1	Pyrodigal	gene	3843783	3845657	.	-	.	ID=GCA000153685_03611_gene;locus_tag=GCA000153685_03611;gene=glmS
contig_1	Pyrodigal	CDS	3843783	3845657	.	-	0	ID=GCA000153685_03611;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000153685_03611;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005886,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000153685_03611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00820,RefSeq:WP_003418289.1,SO:0001217,UniParc:UPI00001651AA,UniRef:UniRef100_P9WN49,UniRef:UniRef50_P9WN49,UniRef:UniRef90_P9WN49;ec_number=2.6.1.16
contig_1	Pyrodigal	gene	3845679	3846155	.	+	.	ID=GCA000153685_03612_gene;locus_tag=GCA000153685_03612
contig_1	Pyrodigal	CDS	3845679	3846155	.	+	0	ID=GCA000153685_03612;Name=DUF2510 domain-containing protein;locus_tag=GCA000153685_03612;product=DUF2510 domain-containing protein;Parent=GCA000153685_03612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900057.1,SO:0001217,UniParc:UPI00000D0F44,UniRef:UniRef100_I6YG51,UniRef:UniRef50_A0A1A2CHV5,UniRef:UniRef90_A0A829C6P3
contig_1	Pyrodigal	gene	3846165	3847007	.	+	.	ID=GCA000153685_03613_gene;locus_tag=GCA000153685_03613
contig_1	Pyrodigal	CDS	3846165	3847007	.	+	0	ID=GCA000153685_03613;Name=Alpha/beta hydrolase;locus_tag=GCA000153685_03613;product=Alpha/beta hydrolase;Parent=GCA000153685_03613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418298.1,SO:0001217,UniParc:UPI00000D1170,UniRef:UniRef100_I6X7B3,UniRef:UniRef50_A0A498PSF6,UniRef:UniRef90_R4MBZ6
contig_1	Pyrodigal	gene	3847027	3848457	.	-	.	ID=GCA000153685_03614_gene;locus_tag=GCA000153685_03614
contig_1	Pyrodigal	CDS	3847027	3848457	.	-	0	ID=GCA000153685_03614;Name=Conserved alanine and proline rich protein;locus_tag=GCA000153685_03614;product=Conserved alanine and proline rich protein;Parent=GCA000153685_03614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F6472,UniRef:UniRef100_A0A0E8XAU3,UniRef:UniRef50_H8IQR1,UniRef:UniRef90_A0A1R3Y457
contig_1	Pyrodigal	gene	3848433	3848744	.	-	.	ID=GCA000153685_03615_gene;locus_tag=GCA000153685_03615
contig_1	Pyrodigal	CDS	3848433	3848744	.	-	0	ID=GCA000153685_03615;Name=ESX-1 secretion-associated protein;locus_tag=GCA000153685_03615;product=ESX-1 secretion-associated protein;Parent=GCA000153685_03615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418301.1,SO:0001217,UniParc:UPI00000CCAF7,UniRef:UniRef100_O06257,UniRef:UniRef50_A0A1A3DEJ6,UniRef:UniRef90_A0A8I0ESJ5
contig_1	Pyrodigal	gene	3848792	3850138	.	-	.	ID=GCA000153685_03616_gene;locus_tag=GCA000153685_03616;gene=glmM
contig_1	Pyrodigal	CDS	3848792	3850138	.	-	0	ID=GCA000153685_03616;Name=phosphoglucosamine mutase;locus_tag=GCA000153685_03616;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252;gene=glmM;Parent=GCA000153685_03616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418304.1,SO:0001217,UniParc:UPI00000D5E44,UniRef:UniRef100_P9WN41,UniRef:UniRef50_Q49869,UniRef:UniRef90_P9WN41;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	3850263	3850718	.	-	.	ID=GCA000153685_03617_gene;locus_tag=GCA000153685_03617;gene=rpsI
contig_1	Pyrodigal	CDS	3850263	3850718	.	-	0	ID=GCA000153685_03617;Name=30S ribosomal protein S9;locus_tag=GCA000153685_03617;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935;gene=rpsI;Parent=GCA000153685_03617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02996,RefSeq:WP_003418308.1,SO:0001217,UniParc:UPI00001351BB,UniRef:UniRef100_P9WH25,UniRef:UniRef50_P9WH25,UniRef:UniRef90_P9WH25
contig_1	Pyrodigal	gene	3850715	3851248	.	-	.	ID=GCA000153685_03618_gene;locus_tag=GCA000153685_03618;gene=rplM
contig_1	Pyrodigal	CDS	3850715	3851248	.	-	0	ID=GCA000153685_03618;Name=50S ribosomal protein L13;locus_tag=GCA000153685_03618;product=50S ribosomal protein L13;Dbxref=GO:0003735,GO:0005840,GO:0006412;gene=rplM;Parent=GCA000153685_03618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02871,SO:0001217,UniParc:UPI0003261316,UniRef:UniRef100_A0A0T9D5H2,UniRef:UniRef50_Q0S3D9,UniRef:UniRef90_A0A0T9D5H2
contig_1	Pyrodigal	gene	3851391	3851693	.	-	.	ID=GCA000153685_03619_gene;locus_tag=GCA000153685_03619;gene=esxT
contig_1	Pyrodigal	CDS	3851391	3851693	.	-	0	ID=GCA000153685_03619;Name=ESAT-6-like protein EsxT;locus_tag=GCA000153685_03619;product=ESAT-6-like protein EsxT;Dbxref=GO:0005576;gene=esxT;Parent=GCA000153685_03619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900059.1,SO:0001217,UniParc:UPI0000036DDC,UniRef:UniRef100_I6YC53,UniRef:UniRef50_I6YC53,UniRef:UniRef90_I6YC53
contig_1	Pyrodigal	gene	3851714	3852145	.	-	.	ID=GCA000153685_03620_gene;locus_tag=GCA000153685_03620;gene=esxU
contig_1	Pyrodigal	CDS	3851714	3852145	.	-	0	ID=GCA000153685_03620;Name=ESAT-6 like protein EsxU;locus_tag=GCA000153685_03620;product=ESAT-6 like protein EsxU;gene=esxU;Parent=GCA000153685_03620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B01,UniRef:UniRef100_A0A0E8VKY2,UniRef:UniRef50_A0A1X2D4P8,UniRef:UniRef90_A0A0E8VKY2
contig_1	Pyrodigal	gene	3852084	3853298	.	-	.	ID=GCA000153685_03621_gene;locus_tag=GCA000153685_03621
contig_1	Pyrodigal	CDS	3852084	3853298	.	-	0	ID=GCA000153685_03621;Name=Type VII secretion-associated protein;locus_tag=GCA000153685_03621;product=Type VII secretion-associated protein;Parent=GCA000153685_03621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418324.1,SO:0001217,UniParc:UPI00000CCAF9,UniRef:UniRef100_A0A1R3Y481,UniRef:UniRef50_Q73S34,UniRef:UniRef90_Q7D5J0
contig_1	Pyrodigal	gene	3853295	3857005	.	-	.	ID=GCA000153685_03622_gene;locus_tag=GCA000153685_03622;gene=eccC4
contig_1	Pyrodigal	CDS	3853295	3857005	.	-	0	ID=GCA000153685_03622;Name=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;locus_tag=GCA000153685_03622;product=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0016887;gene=eccC4;Parent=GCA000153685_03622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912232,RefSeq:WP_003900061.1,SO:0001217,UniParc:UPI00005F6473,UniRef:UniRef100_P9WNA6,UniRef:UniRef50_P9WNA6,UniRef:UniRef90_P9WNA6
contig_1	Pyrodigal	gene	3857119	3858522	.	+	.	ID=GCA000153685_03623_gene;locus_tag=GCA000153685_03623;gene=eccD4
contig_1	Pyrodigal	CDS	3857119	3858522	.	+	0	ID=GCA000153685_03623;Name=type VII secretion system ESX-4 subunit EccD4;locus_tag=GCA000153685_03623;product=type VII secretion system ESX-4 subunit EccD4;Dbxref=GO:0005886,GO:0009274,GO:0009306;gene=eccD4;Parent=GCA000153685_03623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900062,KEGG:K27087,RefSeq:WP_003900062.1,SO:0001217,UniParc:UPI00000D10BE,UniRef:UniRef100_P9WNQ1,UniRef:UniRef50_P9WNQ1,UniRef:UniRef90_P9WNQ1
contig_1	Pyrodigal	gene	3858519	3859886	.	+	.	ID=GCA000153685_03624_gene;locus_tag=GCA000153685_03624;gene=mycP4
contig_1	Pyrodigal	CDS	3858519	3859886	.	+	0	ID=GCA000153685_03624;Name=type VII secretion system ESX-4 serine protease mycosin MycP4;locus_tag=GCA000153685_03624;product=type VII secretion system ESX-4 serine protease mycosin MycP4;Dbxref=GO:0004252,GO:0005886,GO:0008236,GO:0009306,GO:0016485;gene=mycP4;Parent=GCA000153685_03624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418331,BlastRules:WP_010950276,BlastRules:WP_011727724,BlastRules:WP_012392987,RefSeq:WP_003418331.1,SO:0001217,UniParc:UPI00000D5F37,UniRef:UniRef100_I6YC58,UniRef:UniRef50_I6YC58,UniRef:UniRef90_I6YC58;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	3859851	3861263	.	-	.	ID=GCA000153685_03625_gene;locus_tag=GCA000153685_03625;gene=eccB4
contig_1	Pyrodigal	CDS	3859851	3861263	.	-	0	ID=GCA000153685_03625;Name=type VII secretion system ESX-4 subunit EccB4;locus_tag=GCA000153685_03625;product=type VII secretion system ESX-4 subunit EccB4;Dbxref=GO:0005524,GO:0005886,GO:0009306,GO:0016787;gene=eccB4;Parent=GCA000153685_03625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418333,KEGG:K27085,RefSeq:WP_003418333.1,SO:0001217,UniParc:UPI000016535D,UniRef:UniRef100_P9WNR1,UniRef:UniRef50_P9WNR1,UniRef:UniRef90_P9WNR1;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	3861384	3862172	.	+	.	ID=GCA000153685_03626_gene;locus_tag=GCA000153685_03626;gene=cut3
contig_1	Pyrodigal	CDS	3861384	3862172	.	+	0	ID=GCA000153685_03626;Name=putative carboxylesterase Culp3;locus_tag=GCA000153685_03626;product=putative carboxylesterase Culp3;Dbxref=GO:0005576,GO:0052689;gene=cut3;Parent=GCA000153685_03626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27359,RefSeq:WP_003900688.1,SO:0001217,UniParc:UPI00005F6475,UniRef:UniRef100_A0A0H3LJ58,UniRef:UniRef50_P9WP39,UniRef:UniRef90_P9WP39;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3862219	3862899	.	+	.	ID=GCA000153685_03627_gene;locus_tag=GCA000153685_03627;gene=cut4
contig_1	Pyrodigal	CDS	3862219	3862899	.	+	0	ID=GCA000153685_03627;Name=cutinase Cut4;locus_tag=GCA000153685_03627;product=cutinase Cut4;Dbxref=GO:0004623,GO:0005576,GO:0005886,GO:0016042,GO:0016788;gene=cut4;Parent=GCA000153685_03627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418339,RefSeq:WP_003418339.1,SO:0001217,UniParc:UPI000015A6AB,UniRef:UniRef100_O06319,UniRef:UniRef50_O06319,UniRef:UniRef90_O06319;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	3863171	3864856	.	+	.	ID=GCA000153685_03628_gene;locus_tag=GCA000153685_03628
contig_1	Pyrodigal	CDS	3863171	3864856	.	+	0	ID=GCA000153685_03628;Name=Transmembrane protein;locus_tag=GCA000153685_03628;product=Transmembrane protein;Parent=GCA000153685_03628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418342.1,SO:0001217,UniParc:UPI0000ED53B5,UniRef:UniRef100_Q8VJ05,UniRef:UniRef50_X5E609,UniRef:UniRef90_R4MDF7
contig_1	Pyrodigal	gene	3864818	3865711	.	-	.	ID=GCA000153685_03629_gene;locus_tag=GCA000153685_03629;gene=truA
contig_1	Pyrodigal	CDS	3864818	3865711	.	-	0	ID=GCA000153685_03629;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000153685_03629;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009274,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000153685_03629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418344.1,SO:0001217,UniParc:UPI000013767B,UniRef:UniRef100_P9WHP9,UniRef:UniRef50_P9WHP9,UniRef:UniRef90_P9WHP9;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	3865656	3866198	.	-	.	ID=GCA000153685_03630_gene;locus_tag=GCA000153685_03630;gene=rplQ
contig_1	Pyrodigal	CDS	3865656	3866198	.	-	0	ID=GCA000153685_03630;Name=50S ribosomal protein L17;locus_tag=GCA000153685_03630;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA000153685_03630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02879,RefSeq:WP_003418346.1,SO:0001217,UniParc:UPI0000133C54,UniRef:UniRef100_P9WHD3,UniRef:UniRef50_P9WHD3,UniRef:UniRef90_P9WHD3
contig_1	Pyrodigal	gene	3866230	3867273	.	-	.	ID=GCA000153685_03631_gene;locus_tag=GCA000153685_03631;gene=rpoA
contig_1	Pyrodigal	CDS	3866230	3867273	.	-	0	ID=GCA000153685_03631;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000153685_03631;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0005829,GO:0005886,GO:0006351,GO:0009274,GO:0046983;gene=rpoA;Parent=GCA000153685_03631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418351.1,SO:0001217,UniParc:UPI0000033266,UniRef:UniRef100_P9WGZ1,UniRef:UniRef50_P9WGZ1,UniRef:UniRef90_P9WGZ1;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	3867425	3868030	.	-	.	ID=GCA000153685_03632_gene;locus_tag=GCA000153685_03632;gene=rpsD
contig_1	Pyrodigal	CDS	3867425	3868030	.	-	0	ID=GCA000153685_03632;Name=30S ribosomal protein S4;locus_tag=GCA000153685_03632;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000153685_03632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_003418354.1,SO:0001217,UniParc:UPI000013500F,UniRef:UniRef100_P9WH35,UniRef:UniRef50_P9WH35,UniRef:UniRef90_P9WH35
contig_1	Pyrodigal	gene	3868039	3868458	.	-	.	ID=GCA000153685_03633_gene;locus_tag=GCA000153685_03633;gene=rpsK
contig_1	Pyrodigal	CDS	3868039	3868458	.	-	0	ID=GCA000153685_03633;Name=30S ribosomal protein S11;locus_tag=GCA000153685_03633;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000153685_03633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_003900064.1,SO:0001217,UniParc:UPI0000134C02,UniRef:UniRef100_P9WH65,UniRef:UniRef50_P9WH65,UniRef:UniRef90_P9WH65
contig_1	Pyrodigal	gene	3868462	3868836	.	-	.	ID=GCA000153685_03634_gene;locus_tag=GCA000153685_03634;gene=rpsM
contig_1	Pyrodigal	CDS	3868462	3868836	.	-	0	ID=GCA000153685_03634;Name=30S ribosomal protein S13;locus_tag=GCA000153685_03634;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000153685_03634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_003418360.1,SO:0001217,UniParc:UPI0000134CAA,UniRef:UniRef100_P9WH61,UniRef:UniRef50_P9WH61,UniRef:UniRef90_P9WH61
contig_1	Pyrodigal	gene	3869198	3869419	.	-	.	ID=GCA000153685_03635_gene;locus_tag=GCA000153685_03635;gene=infA
contig_1	Pyrodigal	CDS	3869198	3869419	.	-	0	ID=GCA000153685_03635;Name=translation initiation factor IF-1;locus_tag=GCA000153685_03635;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000153685_03635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,RefSeq:WP_003418601.1,SO:0001217,UniParc:UPI00001651AF,UniRef:UniRef100_P0A5H7,UniRef:UniRef50_P0A5H7,UniRef:UniRef90_P0A5H7
contig_1	Pyrodigal	gene	3869673	3870530	.	+	.	ID=GCA000153685_03636_gene;locus_tag=GCA000153685_03636
contig_1	Pyrodigal	CDS	3869673	3870530	.	+	0	ID=GCA000153685_03636;Name=Luciferase-like domain-containing protein;locus_tag=GCA000153685_03636;product=Luciferase-like domain-containing protein;Parent=GCA000153685_03636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900691.1,SO:0001217,UniParc:UPI0001277FC2,UniRef:UniRef100_UPI0001277FC2,UniRef:UniRef50_A0A498QJD2,UniRef:UniRef90_R4M066
contig_1	Pyrodigal	gene	3870603	3871598	.	+	.	ID=GCA000153685_03637_gene;locus_tag=GCA000153685_03637;gene=rfbB
contig_1	Pyrodigal	CDS	3870603	3871598	.	+	0	ID=GCA000153685_03637;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000153685_03637;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009225,GO:0009274,GO:0019305,GO:0045226,GO:0070404;gene=rfbB;Parent=GCA000153685_03637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1088,COG:M,RefSeq:WP_003418607.1,SO:0001217,UniParc:UPI00000D0F4C,UniRef:UniRef100_P9WN65,UniRef:UniRef50_P9WN65,UniRef:UniRef90_P9WN65;ec_number=4.2.1.46
contig_1	Pyrodigal	gene	3871600	3872208	.	+	.	ID=GCA000153685_03638_gene;locus_tag=GCA000153685_03638;gene=rfbC
contig_1	Pyrodigal	CDS	3871600	3872208	.	+	0	ID=GCA000153685_03638;Name=dTDP-4-dehydrorhamnose 3%2C5-epimerase;locus_tag=GCA000153685_03638;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;Dbxref=GO:0005829,GO:0008830,GO:0019305,GO:0045226;gene=rfbC;Parent=GCA000153685_03638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418610.1,SO:0001217,UniParc:UPI00000D10EB,UniRef:UniRef100_P9WH11,UniRef:UniRef50_P9WH11,UniRef:UniRef90_P9WH11;ec_number=5.1.3.13
contig_1	Pyrodigal	gene	3872291	3872587	.	+	.	ID=GCA000153685_03639_gene;locus_tag=GCA000153685_03639
contig_1	Pyrodigal	CDS	3872291	3872587	.	+	0	ID=GCA000153685_03639;Name=DUF222 domain-containing protein;locus_tag=GCA000153685_03639;product=DUF222 domain-containing protein;Parent=GCA000153685_03639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_R4LR48,UniRef:UniRef90_R4LR48
contig_1	Pyrodigal	gene	3872966	3873142	.	-	.	ID=GCA000153685_03640_gene;locus_tag=GCA000153685_03640
contig_1	Pyrodigal	CDS	3872966	3873142	.	-	0	ID=GCA000153685_03640;Name=hypothetical protein;locus_tag=GCA000153685_03640;product=hypothetical protein;Parent=GCA000153685_03640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E76445,UniRef:UniRef100_A0A655JL46,UniRef:UniRef50_A0A655JL46,UniRef:UniRef90_A0A655JL46
contig_1	Pyrodigal	gene	3873639	3875030	.	+	.	ID=GCA000153685_03641_gene;locus_tag=GCA000153685_03641
contig_1	Pyrodigal	CDS	3873639	3875030	.	+	0	ID=GCA000153685_03641;Name=Integrase;locus_tag=GCA000153685_03641;product=Integrase;Parent=GCA000153685_03641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06400,SO:0001217,UniParc:UPI00001651B1,UniRef:UniRef100_Q7D5I2,UniRef:UniRef50_A0A1V4PZE7,UniRef:UniRef90_A5U2U2
contig_1	Pyrodigal	gene	3875027	3875542	.	+	.	ID=GCA000153685_03642_gene;locus_tag=GCA000153685_03642
contig_1	Pyrodigal	CDS	3875027	3875542	.	+	0	ID=GCA000153685_03642;Name=putative phage PhiRv1 protein;locus_tag=GCA000153685_03642;product=putative phage PhiRv1 protein;Parent=GCA000153685_03642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036408.1,SO:0001217,UniParc:UPI000169A2DE,UniRef:UniRef100_UPI000169A2DE,UniRef:UniRef50_O06605,UniRef:UniRef90_O06605
contig_1	Pyrodigal	gene	3875598	3875819	.	+	.	ID=GCA000153685_03643_gene;locus_tag=GCA000153685_03643
contig_1	Pyrodigal	CDS	3875598	3875819	.	+	0	ID=GCA000153685_03643;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03643;product=PhiRv1 phage protein;Parent=GCA000153685_03643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900694.1,SO:0001217,UniParc:UPI00000C1507,UniRef:UniRef100_O06606,UniRef:UniRef50_A0AA91EX68,UniRef:UniRef90_R4M6V9
contig_1	Pyrodigal	gene	3875816	3876214	.	+	.	ID=GCA000153685_03644_gene;locus_tag=GCA000153685_03644
contig_1	Pyrodigal	CDS	3875816	3876214	.	+	0	ID=GCA000153685_03644;Name=putative protein Rv1583c;locus_tag=GCA000153685_03644;product=putative protein Rv1583c;Parent=GCA000153685_03644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900695.1,SO:0001217,UniParc:UPI000013AD8C,UniRef:UniRef100_P9WLU1,UniRef:UniRef50_P9WL49,UniRef:UniRef90_P9WLU1
contig_1	Pyrodigal	gene	3876214	3877629	.	+	.	ID=GCA000153685_03645_gene;locus_tag=GCA000153685_03645
contig_1	Pyrodigal	CDS	3876214	3877629	.	+	0	ID=GCA000153685_03645;Name=Bacteriophage protein;locus_tag=GCA000153685_03645;product=Bacteriophage protein;Parent=GCA000153685_03645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003903975.1,SO:0001217,UniParc:UPI0000165298,UniRef:UniRef100_Q7D5I1,UniRef:UniRef50_L7KMM0,UniRef:UniRef90_R4M5V8
contig_1	Pyrodigal	gene	3877613	3877828	.	+	.	ID=GCA000153685_03646_gene;locus_tag=GCA000153685_03646
contig_1	Pyrodigal	CDS	3877613	3877828	.	+	0	ID=GCA000153685_03646;Name=hypothetical protein;locus_tag=GCA000153685_03646;product=hypothetical protein;Parent=GCA000153685_03646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42AF,UniRef:UniRef100_A0A0E9AA21,UniRef:UniRef50_A0A0E9AA21,UniRef:UniRef90_A0A0E9AA21
contig_1	Pyrodigal	gene	3877825	3878220	.	+	.	ID=GCA000153685_03647_gene;locus_tag=GCA000153685_03647
contig_1	Pyrodigal	CDS	3877825	3878220	.	+	0	ID=GCA000153685_03647;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03647;product=PhiRv1 phage protein;Parent=GCA000153685_03647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900698.1,SO:0001217,UniParc:UPI0000165297,UniRef:UniRef100_Q7D5I0,UniRef:UniRef50_R4MDG8,UniRef:UniRef90_Q7D5I0
contig_1	Pyrodigal	gene	3878234	3878506	.	+	.	ID=GCA000153685_03648_gene;locus_tag=GCA000153685_03648
contig_1	Pyrodigal	CDS	3878234	3878506	.	+	0	ID=GCA000153685_03648;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03648;product=PhiRv1 phage protein;Parent=GCA000153685_03648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900699.1,SO:0001217,UniParc:UPI00000D1199,UniRef:UniRef100_A5U2T6,UniRef:UniRef50_A5U2T6,UniRef:UniRef90_A5U2T6
contig_1	Pyrodigal	gene	3878503	3878817	.	+	.	ID=GCA000153685_03649_gene;locus_tag=GCA000153685_03649
contig_1	Pyrodigal	CDS	3878503	3878817	.	+	0	ID=GCA000153685_03649;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03649;product=PhiRv1 phage protein;Parent=GCA000153685_03649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900700.1,SO:0001217,UniParc:UPI00000D1196,UniRef:UniRef100_A5U2T5,UniRef:UniRef50_A0A1S1LY06,UniRef:UniRef90_A5U2T5
contig_1	Pyrodigal	gene	3878898	3879368	.	+	.	ID=GCA000153685_03650_gene;locus_tag=GCA000153685_03650
contig_1	Pyrodigal	CDS	3878898	3879368	.	+	0	ID=GCA000153685_03650;Name=phage terminase small subunit P27 family;locus_tag=GCA000153685_03650;product=phage terminase small subunit P27 family;Parent=GCA000153685_03650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900701.1,SO:0001217,UniParc:UPI00000D10A9,UniRef:UniRef100_A5U2T4,UniRef:UniRef50_A5U2T4,UniRef:UniRef90_A5U2T4
contig_1	Pyrodigal	gene	3879542	3880054	.	+	.	ID=GCA000153685_03651_gene;locus_tag=GCA000153685_03651
contig_1	Pyrodigal	CDS	3879542	3880054	.	+	0	ID=GCA000153685_03651;Name=HK97 family phage prohead protease;locus_tag=GCA000153685_03651;product=HK97 family phage prohead protease;Dbxref=GO:0005198,GO:0008233,GO:0019068,GO:0019082;Parent=GCA000153685_03651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A314,UniRef:UniRef100_A0A0H3LEU5,UniRef:UniRef50_A0A0H3LCI4,UniRef:UniRef90_A0A0H3LEU5
contig_1	Pyrodigal	gene	3880062	3881483	.	+	.	ID=GCA000153685_03652_gene;locus_tag=GCA000153685_03652
contig_1	Pyrodigal	CDS	3880062	3881483	.	+	0	ID=GCA000153685_03652;Name=phage major capsid protein;locus_tag=GCA000153685_03652;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000153685_03652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900703.1,SO:0001217,UniParc:UPI00000C14D4,UniRef:UniRef100_A5U2T2,UniRef:UniRef50_P71947,UniRef:UniRef90_A5U2T2
contig_1	Pyrodigal	gene	3881473	3882336	.	-	.	ID=GCA000153685_03653_gene;locus_tag=GCA000153685_03653
contig_1	Pyrodigal	CDS	3881473	3882336	.	-	0	ID=GCA000153685_03653;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03653;product=PhiRv1 phage protein;Parent=GCA000153685_03653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C4F577,UniRef:UniRef100_A5U2T1,UniRef:UniRef50_A5U2T1,UniRef:UniRef90_A5U2T1
contig_1	Pyrodigal	gene	3882403	3882813	.	-	.	ID=GCA000153685_03654_gene;locus_tag=GCA000153685_03654
contig_1	Pyrodigal	CDS	3882403	3882813	.	-	0	ID=GCA000153685_03654;Name=PhiRv1 phage protein;locus_tag=GCA000153685_03654;product=PhiRv1 phage protein;Parent=GCA000153685_03654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003904648.1,SO:0001217,UniParc:UPI00000D112A,UniRef:UniRef100_A5U2S9,UniRef:UniRef50_R4M8A1,UniRef:UniRef90_A5U2S9
contig_1	Pyrodigal	gene	3882988	3884082	.	-	.	ID=GCA000153685_03655_gene;locus_tag=GCA000153685_03655
contig_1	Pyrodigal	CDS	3882988	3884082	.	-	0	ID=GCA000153685_03655;Name=putative dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000153685_03655;product=putative dTDP-glucose 4%2C6-dehydratase;Parent=GCA000153685_03655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900066.1,SO:0001217,UniParc:UPI00001651B2,UniRef:UniRef100_A0A1R3Y5Y1,UniRef:UniRef50_A0A498PP87,UniRef:UniRef90_Q6MWX3
contig_1	Pyrodigal	gene	3884086	3885096	.	-	.	ID=GCA000153685_03656_gene;locus_tag=GCA000153685_03656;gene=mhpE
contig_1	Pyrodigal	CDS	3884086	3885096	.	-	0	ID=GCA000153685_03656;Name=Oxaloacetate decarboxylase;locus_tag=GCA000153685_03656;product=Oxaloacetate decarboxylase;Dbxref=GO:0003852,GO:0008948,GO:0009098,GO:0046872;gene=mhpE;Parent=GCA000153685_03656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01666,RefSeq:WP_003900067.1,SO:0001217,UniParc:UPI00000CCB02,UniRef:UniRef100_O06334,UniRef:UniRef50_O06334,UniRef:UniRef90_O06334;ec_number=4.1.1.112
contig_1	Pyrodigal	gene	3885157	3886830	.	-	.	ID=GCA000153685_03657_gene;locus_tag=GCA000153685_03657;gene=ilvB2
contig_1	Pyrodigal	CDS	3885157	3886830	.	-	0	ID=GCA000153685_03657;Name=Putative acetolactate synthase large subunit IlvB2;locus_tag=GCA000153685_03657;product=Putative acetolactate synthase large subunit IlvB2;Dbxref=GO:0000287,GO:0003984,GO:0005948,GO:0009097,GO:0009099,GO:0030976,GO:0050660;gene=ilvB2;Parent=GCA000153685_03657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE852,UniRef:UniRef100_Q7D5H1,UniRef:UniRef50_O06335,UniRef:UniRef90_O06335;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3886821	3887210	.	-	.	ID=GCA000153685_03658_gene;locus_tag=GCA000153685_03658
contig_1	Pyrodigal	CDS	3886821	3887210	.	-	0	ID=GCA000153685_03658;Name=Cupin type-1 domain-containing protein;locus_tag=GCA000153685_03658;product=Cupin type-1 domain-containing protein;Parent=GCA000153685_03658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900069.1,SO:0001217,UniParc:UPI00005EE853,UniRef:UniRef100_O06336,UniRef:UniRef50_Q7D5H0,UniRef:UniRef90_Q7D5H0
contig_1	Pyrodigal	gene	3887375	3887881	.	+	.	ID=GCA000153685_03659_gene;locus_tag=GCA000153685_03659
contig_1	Pyrodigal	CDS	3887375	3887881	.	+	0	ID=GCA000153685_03659;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_03659;product=SnoaL-like domain-containing protein;Parent=GCA000153685_03659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418774.1,SO:0001217,UniParc:UPI00000D116E,UniRef:UniRef100_I6YG83,UniRef:UniRef50_R4M2Q1,UniRef:UniRef90_R4M2Q1
contig_1	Pyrodigal	gene	3887961	3888863	.	-	.	ID=GCA000153685_03660_gene;locus_tag=GCA000153685_03660
contig_1	Pyrodigal	CDS	3887961	3888863	.	-	0	ID=GCA000153685_03660;Name=Peroxidase;locus_tag=GCA000153685_03660;product=Peroxidase;Parent=GCA000153685_03660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913481.1,SO:0001217,UniParc:UPI00005EE854,UniRef:UniRef100_A0A0H3LEV2,UniRef:UniRef50_A0A378SJY2,UniRef:UniRef90_A0A0H3LEV2
contig_1	Pyrodigal	gene	3889026	3890375	.	-	.	ID=GCA000153685_03661_gene;locus_tag=GCA000153685_03661;gene=kgtP
contig_1	Pyrodigal	CDS	3889026	3890375	.	-	0	ID=GCA000153685_03661;Name=Dicarboxylic acid transport integral membrane protein KgtP;locus_tag=GCA000153685_03661;product=Dicarboxylic acid transport integral membrane protein KgtP;gene=kgtP;Parent=GCA000153685_03661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900863.1,SO:0001217,UniParc:UPI00000D5FE4,UniRef:UniRef100_A5U8F1,UniRef:UniRef50_J9RZ15,UniRef:UniRef90_A5U8F1
contig_1	Pyrodigal	gene	3890748	3891044	.	+	.	ID=GCA000153685_03662_gene;locus_tag=GCA000153685_03662
contig_1	Pyrodigal	CDS	3890748	3891044	.	+	0	ID=GCA000153685_03662;Name=PE family protein PE31;locus_tag=GCA000153685_03662;product=PE family protein PE31;Parent=GCA000153685_03662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418781.1,SO:0001217,UniParc:UPI00000D5FC4,UniRef:UniRef100_I6YG87,UniRef:UniRef50_A0A7Z7NA82,UniRef:UniRef90_I6YG87
contig_1	Pyrodigal	gene	3891081	3892262	.	+	.	ID=GCA000153685_03663_gene;locus_tag=GCA000153685_03663
contig_1	Pyrodigal	CDS	3891081	3892262	.	+	0	ID=GCA000153685_03663;Name=PE family protein PPE60;locus_tag=GCA000153685_03663;product=PE family protein PPE60;Parent=GCA000153685_03663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900072.1,SO:0001217,UniParc:UPI00000CCB06,UniRef:UniRef100_Q6MWX1,UniRef:UniRef50_R4MN97,UniRef:UniRef90_Q6MWX1
contig_1	Pyrodigal	gene	3892292	3895540	.	+	.	ID=GCA000153685_03664_gene;locus_tag=GCA000153685_03664
contig_1	Pyrodigal	CDS	3892292	3895540	.	+	0	ID=GCA000153685_03664;Name=putative membrane protein Rv3479;locus_tag=GCA000153685_03664;product=putative membrane protein Rv3479;Dbxref=GO:0005886,GO:0016042,GO:0016787;Parent=GCA000153685_03664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003913466.1,SO:0001217,UniParc:UPI0001B46916,UniRef:UniRef100_A0A0H3LEU0,UniRef:UniRef50_O06342,UniRef:UniRef90_O06342
contig_1	Pyrodigal	gene	3895564	3897057	.	-	.	ID=GCA000153685_03665_gene;locus_tag=GCA000153685_03665
contig_1	Pyrodigal	CDS	3895564	3897057	.	-	0	ID=GCA000153685_03665;Name=Putative diacyglycerol O-acyltransferase Rv3480c;locus_tag=GCA000153685_03665;product=Putative diacyglycerol O-acyltransferase Rv3480c;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0019432,GO:0045017,GO:0047196,GO:0051701,GO:0071731;Parent=GCA000153685_03665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418921.1,SO:0001217,UniParc:UPI000013C291,UniRef:UniRef100_P9WKA7,UniRef:UniRef50_P9WKA7,UniRef:UniRef90_P9WKA7;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	3897148	3897837	.	-	.	ID=GCA000153685_03666_gene;locus_tag=GCA000153685_03666
contig_1	Pyrodigal	CDS	3897148	3897837	.	-	0	ID=GCA000153685_03666;Name=Integral membrane protein;locus_tag=GCA000153685_03666;product=Integral membrane protein;Parent=GCA000153685_03666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418922.1,SO:0001217,UniParc:UPI00000D0FD2,UniRef:UniRef100_A0A0H3LJA5,UniRef:UniRef50_I4BD82,UniRef:UniRef90_A0A0H3LJA5
contig_1	Pyrodigal	gene	3897979	3898584	.	-	.	ID=GCA000153685_03667_gene;locus_tag=GCA000153685_03667
contig_1	Pyrodigal	CDS	3897979	3898584	.	-	0	ID=GCA000153685_03667;Name=DUF2510 domain-containing protein;locus_tag=GCA000153685_03667;product=DUF2510 domain-containing protein;Parent=GCA000153685_03667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE85A,UniRef:UniRef100_A5U8F7,UniRef:UniRef50_R4M2R0,UniRef:UniRef90_R4M2R0
contig_1	Pyrodigal	gene	3898805	3899467	.	-	.	ID=GCA000153685_03668_gene;locus_tag=GCA000153685_03668
contig_1	Pyrodigal	CDS	3898805	3899467	.	-	0	ID=GCA000153685_03668;Name=LppP/LprE family lipoprotein;locus_tag=GCA000153685_03668;product=LppP/LprE family lipoprotein;Parent=GCA000153685_03668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418931.1,SO:0001217,UniParc:UPI00000D10F1,UniRef:UniRef100_I6X7F2,UniRef:UniRef50_A0A1E3S8C7,UniRef:UniRef90_R4MAU4
contig_1	Pyrodigal	gene	3899733	3901271	.	+	.	ID=GCA000153685_03669_gene;locus_tag=GCA000153685_03669;gene=cpsA
contig_1	Pyrodigal	CDS	3899733	3901271	.	+	0	ID=GCA000153685_03669;Name=putative conserved protein CpsA;locus_tag=GCA000153685_03669;product=putative conserved protein CpsA;gene=cpsA;Parent=GCA000153685_03669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900866.1,SO:0001217,UniParc:UPI0000165361,UniRef:UniRef100_O06347,UniRef:UniRef50_Q7APX1,UniRef:UniRef90_O06347
contig_1	Pyrodigal	gene	3901277	3902221	.	-	.	ID=GCA000153685_03670_gene;locus_tag=GCA000153685_03670
contig_1	Pyrodigal	CDS	3901277	3902221	.	-	0	ID=GCA000153685_03670;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03670;product=SDR family oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_03670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900075.1,SO:0001217,UniParc:UPI00000D4F36,UniRef:UniRef100_A5U8G0,UniRef:UniRef50_A0A378TDR5,UniRef:UniRef90_A0A7W0AN06
contig_1	Pyrodigal	gene	3902385	3902876	.	+	.	ID=GCA000153685_03671_gene;locus_tag=GCA000153685_03671
contig_1	Pyrodigal	CDS	3902385	3902876	.	+	0	ID=GCA000153685_03671;Name=putative membrane protein Rv3486;locus_tag=GCA000153685_03671;product=putative membrane protein Rv3486;Dbxref=GO:0005886;Parent=GCA000153685_03671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB09,UniRef:UniRef100_O06349,UniRef:UniRef50_O06349,UniRef:UniRef90_O06349
contig_1	Pyrodigal	gene	3902829	3903812	.	-	.	ID=GCA000153685_03672_gene;locus_tag=GCA000153685_03672;gene=lipF
contig_1	Pyrodigal	CDS	3902829	3903812	.	-	0	ID=GCA000153685_03672;Name=Carboxylesterase/phospholipase LipF;locus_tag=GCA000153685_03672;product=Carboxylesterase/phospholipase LipF;Dbxref=GO:0004629,GO:0004806,GO:0005576,GO:0034480,GO:0051701,GO:0052572,GO:0106435;gene=lipF;Parent=GCA000153685_03672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D4F37,UniRef:UniRef100_O06350,UniRef:UniRef50_O06350,UniRef:UniRef90_O06350;ec_number=3.1.4.3
contig_1	Pyrodigal	gene	3904322	3904645	.	+	.	ID=GCA000153685_03673_gene;locus_tag=GCA000153685_03673;gene=padR
contig_1	Pyrodigal	CDS	3904322	3904645	.	+	0	ID=GCA000153685_03673;Name=Transcriptional regulator Rv3488;locus_tag=GCA000153685_03673;product=Transcriptional regulator Rv3488;Dbxref=GO:0003677,GO:0046872;gene=padR;Parent=GCA000153685_03673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1695,COG:K,RefSeq:WP_003418948.1,SO:0001217,UniParc:UPI00000D1157,UniRef:UniRef100_I6X7F9,UniRef:UniRef50_I6X7F9,UniRef:UniRef90_I6X7F9
contig_1	Pyrodigal	gene	3904727	3904891	.	+	.	ID=GCA000153685_03674_gene;locus_tag=GCA000153685_03674
contig_1	Pyrodigal	CDS	3904727	3904891	.	+	0	ID=GCA000153685_03674;Name=hypothetical protein;locus_tag=GCA000153685_03674;product=hypothetical protein;Parent=GCA000153685_03674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418950.1,SO:0001217,UniParc:UPI00000D0FAB,UniRef:UniRef100_I6YC91,UniRef:UniRef50_I6YC91,UniRef:UniRef90_I6YC91
contig_1	Pyrodigal	gene	3904891	3906393	.	+	.	ID=GCA000153685_03675_gene;locus_tag=GCA000153685_03675;gene=otsA
contig_1	Pyrodigal	CDS	3904891	3906393	.	+	0	ID=GCA000153685_03675;Name=trehalose-6-phosphate synthase;locus_tag=GCA000153685_03675;product=trehalose-6-phosphate synthase;Dbxref=GO:0003825,GO:0005829,GO:0005886,GO:0005992,GO:0009274,GO:0030145,GO:0047260;gene=otsA;Parent=GCA000153685_03675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900868,RefSeq:WP_003900868.1,SO:0001217,UniParc:UPI00000CCB0A,UniRef:UniRef100_P9WN11,UniRef:UniRef50_P9WN11,UniRef:UniRef90_P9WN11;ec_number=2.4.1.347
contig_1	Pyrodigal	gene	3906545	3907123	.	+	.	ID=GCA000153685_03676_gene;locus_tag=GCA000153685_03676
contig_1	Pyrodigal	CDS	3906545	3907123	.	+	0	ID=GCA000153685_03676;Name=Secreted protein;locus_tag=GCA000153685_03676;product=Secreted protein;Parent=GCA000153685_03676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418954.1,SO:0001217,UniParc:UPI00000D10AD,UniRef:UniRef100_I6XHD1,UniRef:UniRef50_I6XHD1,UniRef:UniRef90_I6XHD1
contig_1	Pyrodigal	gene	3907120	3907602	.	-	.	ID=GCA000153685_03677_gene;locus_tag=GCA000153685_03677
contig_1	Pyrodigal	CDS	3907120	3907602	.	-	0	ID=GCA000153685_03677;Name=FIG00820195: MCE associated membrane protein;locus_tag=GCA000153685_03677;product=FIG00820195: MCE associated membrane protein;Parent=GCA000153685_03677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418958.1,SO:0001217,UniParc:UPI00000D10A0,UniRef:UniRef100_A0A1R3Y4E5,UniRef:UniRef50_I4BPP8,UniRef:UniRef90_A0A1R3Y4E5
contig_1	Pyrodigal	gene	3907602	3908330	.	-	.	ID=GCA000153685_03678_gene;locus_tag=GCA000153685_03678
contig_1	Pyrodigal	CDS	3907602	3908330	.	-	0	ID=GCA000153685_03678;Name=FIG00821219: MCE associated membrane protein;locus_tag=GCA000153685_03678;product=FIG00821219: MCE associated membrane protein;Parent=GCA000153685_03678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18481,RefSeq:WP_003418960.1,SO:0001217,UniParc:UPI00000D1107,UniRef:UniRef100_A0A1R3Y4B3,UniRef:UniRef50_V5XIV9,UniRef:UniRef90_A0A1R3Y4B3
contig_1	Pyrodigal	gene	3908330	3910024	.	-	.	ID=GCA000153685_03679_gene;locus_tag=GCA000153685_03679
contig_1	Pyrodigal	CDS	3908330	3910024	.	-	0	ID=GCA000153685_03679;Name=Mce-family protein Mce4F;locus_tag=GCA000153685_03679;product=Mce-family protein Mce4F;Parent=GCA000153685_03679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418963.1,SO:0001217,UniParc:UPI00000D5E99,UniRef:UniRef100_I6YC95,UniRef:UniRef50_I6YC95,UniRef:UniRef90_I6YC95
contig_1	Pyrodigal	gene	3910035	3911189	.	-	.	ID=GCA000153685_03680_gene;locus_tag=GCA000153685_03680;gene=lprN
contig_1	Pyrodigal	CDS	3910035	3911189	.	-	0	ID=GCA000153685_03680;Name=Mce family lipoprotein LprN;locus_tag=GCA000153685_03680;product=Mce family lipoprotein LprN;Dbxref=GO:0005886,GO:0009274,GO:0044409,GO:0120010,GO:0120014;gene=lprN;Parent=GCA000153685_03680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418964,RefSeq:WP_003418964.1,SO:0001217,UniParc:UPI00000D5FEC,UniRef:UniRef100_I6Y3P1,UniRef:UniRef50_I6Y3P1,UniRef:UniRef90_I6Y3P1
contig_1	Pyrodigal	gene	3911186	3912538	.	-	.	ID=GCA000153685_03681_gene;locus_tag=GCA000153685_03681
contig_1	Pyrodigal	CDS	3911186	3912538	.	-	0	ID=GCA000153685_03681;Name=Mce-family protein Mce4D;locus_tag=GCA000153685_03681;product=Mce-family protein Mce4D;Parent=GCA000153685_03681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001651B9,UniRef:UniRef100_I6XHD6,UniRef:UniRef50_I6XHD6,UniRef:UniRef90_I6XHD6
contig_1	Pyrodigal	gene	3912538	3913611	.	-	.	ID=GCA000153685_03682_gene;locus_tag=GCA000153685_03682
contig_1	Pyrodigal	CDS	3912538	3913611	.	-	0	ID=GCA000153685_03682;Name=Mce-family protein Mce4C;locus_tag=GCA000153685_03682;product=Mce-family protein Mce4C;Parent=GCA000153685_03682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418967.1,SO:0001217,UniParc:UPI00000D5EBB,UniRef:UniRef100_I6YGB1,UniRef:UniRef50_I6YGB1,UniRef:UniRef90_I6YGB1
contig_1	Pyrodigal	gene	3913601	3914653	.	-	.	ID=GCA000153685_03683_gene;locus_tag=GCA000153685_03683
contig_1	Pyrodigal	CDS	3913601	3914653	.	-	0	ID=GCA000153685_03683;Name=Mce-family protein Mce4B;locus_tag=GCA000153685_03683;product=Mce-family protein Mce4B;Parent=GCA000153685_03683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418972.1,SO:0001217,UniParc:UPI00000D5EF3,UniRef:UniRef100_I6X7G8,UniRef:UniRef50_I6X7G8,UniRef:UniRef90_I6X7G8
contig_1	Pyrodigal	gene	3914653	3915855	.	-	.	ID=GCA000153685_03684_gene;locus_tag=GCA000153685_03684;gene=mce4A
contig_1	Pyrodigal	CDS	3914653	3915855	.	-	0	ID=GCA000153685_03684;Name=virulence factor Mce4A;locus_tag=GCA000153685_03684;product=virulence factor Mce4A;gene=mce4A;Parent=GCA000153685_03684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003418979,RefSeq:WP_003418979.1,SO:0001217,UniParc:UPI00000D5E87,UniRef:UniRef100_I6YC99,UniRef:UniRef50_I6YC99,UniRef:UniRef90_I6YC99
contig_1	Pyrodigal	gene	3915875	3916717	.	-	.	ID=GCA000153685_03685_gene;locus_tag=GCA000153685_03685;gene=mlaE
contig_1	Pyrodigal	CDS	3915875	3916717	.	-	0	ID=GCA000153685_03685;Name=Conserved integral membrane protein YrbE4B putative ABC transporter;locus_tag=GCA000153685_03685;product=Conserved integral membrane protein YrbE4B putative ABC transporter;gene=mlaE;Parent=GCA000153685_03685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,RefSeq:WP_003418983.1,SO:0001217,UniParc:UPI00000D1158,UniRef:UniRef100_I6Y3P5,UniRef:UniRef50_I6Y3P5,UniRef:UniRef90_I6Y3P5
contig_1	Pyrodigal	gene	3916752	3917516	.	-	.	ID=GCA000153685_03686_gene;locus_tag=GCA000153685_03686;gene=mlaE
contig_1	Pyrodigal	CDS	3916752	3917516	.	-	0	ID=GCA000153685_03686;Name=Conserved integral membrane protein YrbE4A putative ABC transporter;locus_tag=GCA000153685_03686;product=Conserved integral membrane protein YrbE4A putative ABC transporter;gene=mlaE;Parent=GCA000153685_03686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,KEGG:K02066,RefSeq:WP_003418986.1,SO:0001217,UniParc:UPI00000CCB81,UniRef:UniRef100_O53546,UniRef:UniRef50_A0A439DT04,UniRef:UniRef90_O53546
contig_1	Pyrodigal	gene	3917742	3918695	.	-	.	ID=GCA000153685_03687_gene;locus_tag=GCA000153685_03687;gene=chsB1
contig_1	Pyrodigal	CDS	3917742	3918695	.	-	0	ID=GCA000153685_03687;Name=3-oxoacyl-ACP reductase;locus_tag=GCA000153685_03687;product=3-oxoacyl-ACP reductase;Dbxref=GO:0003857,GO:0004300,GO:0006635,GO:0006707,GO:0016491;gene=chsB1;Parent=GCA000153685_03687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418990.1,SO:0001217,UniParc:UPI00000D3AE6,UniRef:UniRef100_O53547,UniRef:UniRef50_O53547,UniRef:UniRef90_O53547;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3918720	3918911	.	-	.	ID=GCA000153685_03688_gene;locus_tag=GCA000153685_03688;gene=fer
contig_1	Pyrodigal	CDS	3918720	3918911	.	-	0	ID=GCA000153685_03688;Name=Ferredoxin;locus_tag=GCA000153685_03688;product=Ferredoxin;gene=fer;Parent=GCA000153685_03688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1141,RefSeq:WP_003418993.1,SO:0001217,UniParc:UPI00000D5E7B,UniRef:UniRef100_I6X7H4,UniRef:UniRef50_I6X7H4,UniRef:UniRef90_I6X7H4
contig_1	Pyrodigal	gene	3919126	3920328	.	+	.	ID=GCA000153685_03689_gene;locus_tag=GCA000153685_03689;gene=fadE26
contig_1	Pyrodigal	CDS	3919126	3920328	.	+	0	ID=GCA000153685_03689;Name=Acyl-CoA dehydrogenase FadE26;locus_tag=GCA000153685_03689;product=Acyl-CoA dehydrogenase FadE26;Dbxref=GO:0006707,GO:0016627,GO:0050660;gene=fadE26;Parent=GCA000153685_03689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003418997.1,SO:0001217,UniParc:UPI00000D5E76,UniRef:UniRef100_I6YCA3,UniRef:UniRef50_I6YCA3,UniRef:UniRef90_I6YCA3;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3920353	3921474	.	+	.	ID=GCA000153685_03690_gene;locus_tag=GCA000153685_03690;gene=fadE27
contig_1	Pyrodigal	CDS	3920353	3921474	.	+	0	ID=GCA000153685_03690;Name=Acyl-CoA dehydrogenase FadE27;locus_tag=GCA000153685_03690;product=Acyl-CoA dehydrogenase FadE27;Dbxref=GO:0003995,GO:0006707,GO:0050660;gene=fadE27;Parent=GCA000153685_03690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419000.1,SO:0001217,UniParc:UPI00000D5E28,UniRef:UniRef100_I6Y3Q0,UniRef:UniRef50_I6Y3Q0,UniRef:UniRef90_I6Y3Q0;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3921545	3923053	.	+	.	ID=GCA000153685_03691_gene;locus_tag=GCA000153685_03691;gene=fadD17
contig_1	Pyrodigal	CDS	3921545	3923053	.	+	0	ID=GCA000153685_03691;Name=long-chain-fatty-acid--CoA ligase FadD17;locus_tag=GCA000153685_03691;product=long-chain-fatty-acid--CoA ligase FadD17;Dbxref=GO:0001676,GO:0004467,GO:0005324,GO:0005524,GO:0005829,GO:0005886,GO:0008610,GO:0031956,GO:0042759,GO:0044539,GO:0047747,GO:0071766;gene=fadD17;Parent=GCA000153685_03691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900870.1,SO:0001217,UniParc:UPI00001651BB,UniRef:UniRef100_A0A0H3LM38,UniRef:UniRef50_O53551,UniRef:UniRef90_O53551;ec_number=6.2.1.3
contig_1	Pyrodigal	gene	3923224	3927738	.	+	.	ID=GCA000153685_03692_gene;locus_tag=GCA000153685_03692
contig_1	Pyrodigal	CDS	3923224	3927738	.	+	0	ID=GCA000153685_03692;Name=PE family protein;locus_tag=GCA000153685_03692;product=PE family protein;Parent=GCA000153685_03692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036409.1,SO:0001217,UniParc:UPI0003AB4A77,UniRef:UniRef100_UPI0003AB4A77,UniRef:UniRef50_A0AA44LR81,UniRef:UniRef90_A0AA44LR81
contig_1	Pyrodigal	gene	3928029	3933758	.	+	.	ID=GCA000153685_03693_gene;locus_tag=GCA000153685_03693
contig_1	Pyrodigal	CDS	3928029	3933758	.	+	0	ID=GCA000153685_03693;Name=PE family protein;locus_tag=GCA000153685_03693;product=PE family protein;Parent=GCA000153685_03693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036410.1,SO:0001217,UniParc:UPI0003AB4A7B,UniRef:UniRef100_UPI0003AB4A7B,UniRef:UniRef50_UPI0003AB4A7B,UniRef:UniRef90_UPI0003AB4A7B
contig_1	Pyrodigal	gene	3933925	3935472	.	-	.	ID=GCA000153685_03694_gene;locus_tag=GCA000153685_03694;gene=ilvX
contig_1	Pyrodigal	CDS	3933925	3935472	.	-	0	ID=GCA000153685_03694;Name=acetolactate synthase large subunit;locus_tag=GCA000153685_03694;product=acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003824,GO:0003984,GO:0005576,GO:0005886,GO:0009097,GO:0009099,GO:0009274,GO:0030976,GO:0050660;gene=ilvX;Parent=GCA000153685_03694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900872.1,SO:0001217,UniParc:UPI00000D3AE8,UniRef:UniRef100_O53554,UniRef:UniRef50_O53554,UniRef:UniRef90_O53554;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	3935469	3936305	.	-	.	ID=GCA000153685_03695_gene;locus_tag=GCA000153685_03695
contig_1	Pyrodigal	CDS	3935469	3936305	.	-	0	ID=GCA000153685_03695;Name=Conserved protein;locus_tag=GCA000153685_03695;product=Conserved protein;Parent=GCA000153685_03695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003421145.1,SO:0001217,UniParc:UPI00000D10C8,UniRef:UniRef100_I6Y3Q7,UniRef:UniRef50_A0A819CS64,UniRef:UniRef90_I6Y3Q7
contig_1	Pyrodigal	gene	3936665	3942661	.	+	.	ID=GCA000153685_03696_gene;locus_tag=GCA000153685_03696
contig_1	Pyrodigal	CDS	3936665	3942661	.	+	0	ID=GCA000153685_03696;Name=hypothetical protein;locus_tag=GCA000153685_03696;product=hypothetical protein;Parent=GCA000153685_03696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF00934.25,PFAM:PF21526.2
contig_1	Pyrodigal	gene	3942817	3943410	.	+	.	ID=GCA000153685_03697_gene;locus_tag=GCA000153685_03697
contig_1	Pyrodigal	CDS	3942817	3943410	.	+	0	ID=GCA000153685_03697;Name=Secreted protein;locus_tag=GCA000153685_03697;product=Secreted protein;Parent=GCA000153685_03697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAQ2U7K9,UniRef:UniRef90_A0AAQ2U7K9
contig_1	Pyrodigal	gene	3943492	3947088	.	+	.	ID=GCA000153685_03698_gene;locus_tag=GCA000153685_03698
contig_1	Pyrodigal	CDS	3943492	3947088	.	+	0	ID=GCA000153685_03698;Name=PE family protein;locus_tag=GCA000153685_03698;product=PE family protein;Parent=GCA000153685_03698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036412.1,SO:0001217,UniParc:UPI0003AB4A8B,UniRef:UniRef100_UPI0003AB4A8B,UniRef:UniRef50_UPI0003AB4A8B,UniRef:UniRef90_UPI0003AB4A8B
contig_1	Pyrodigal	gene	3947119	3947727	.	+	.	ID=GCA000153685_03699_gene;locus_tag=GCA000153685_03699
contig_1	Pyrodigal	CDS	3947119	3947727	.	+	0	ID=GCA000153685_03699;Name=hypothetical protein;locus_tag=GCA000153685_03699;product=hypothetical protein;Parent=GCA000153685_03699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00045B6CAD,UniRef:UniRef100_A0A0E8WU41,UniRef:UniRef50_A0A0E8WU41,UniRef:UniRef90_A0A0E8WU41
contig_1	Pyrodigal	gene	3947649	3949295	.	-	.	ID=GCA000153685_03700_gene;locus_tag=GCA000153685_03700;gene=fadD19
contig_1	Pyrodigal	CDS	3947649	3949295	.	-	0	ID=GCA000153685_03700;Name=Medium/long-chain-fatty-acid--CoA/3-oxocholest-4-en-26-oate--CoA ligase;locus_tag=GCA000153685_03700;product=Medium/long-chain-fatty-acid--CoA/3-oxocholest-4-en-26-oate--CoA ligase;Dbxref=GO:0004467,GO:0005524,GO:0006633,GO:0008203,GO:0008610,GO:0009274,GO:0052572,GO:0071766,GO:0102391;gene=fadD19;Parent=GCA000153685_03700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_003900706.1,SO:0001217,UniParc:UPI0001277FC7,UniRef:UniRef100_A0A0E9AQ95,UniRef:UniRef50_P9WQ51,UniRef:UniRef90_P9WQ51;ec_number=6.2.1.42
contig_1	Pyrodigal	gene	3949360	3950160	.	+	.	ID=GCA000153685_03701_gene;locus_tag=GCA000153685_03701;gene=echA19
contig_1	Pyrodigal	CDS	3949360	3950160	.	+	0	ID=GCA000153685_03701;Name=crotonase/enoyl-CoA hydratase family protein;locus_tag=GCA000153685_03701;product=crotonase/enoyl-CoA hydratase family protein;Dbxref=GO:0006635,GO:0006707,GO:0016829,GO:0052572;gene=echA19;Parent=GCA000153685_03701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E6232B,UniRef:UniRef100_A0A0E8TWQ5,UniRef:UniRef50_O53561,UniRef:UniRef90_O53561;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3950256	3951095	.	+	.	ID=GCA000153685_03702_gene;locus_tag=GCA000153685_03702
contig_1	Pyrodigal	CDS	3950256	3951095	.	+	0	ID=GCA000153685_03702;Name=Cullin%2C a subunit of E3 ubiquitin ligase;locus_tag=GCA000153685_03702;product=Cullin%2C a subunit of E3 ubiquitin ligase;Parent=GCA000153685_03702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419184.1,SO:0001217,UniParc:UPI00000CCB82,UniRef:UniRef100_O53562,UniRef:UniRef50_O53562,UniRef:UniRef90_O53562
contig_1	Pyrodigal	gene	3951150	3952346	.	-	.	ID=GCA000153685_03703_gene;locus_tag=GCA000153685_03703;gene=cyp142
contig_1	Pyrodigal	CDS	3951150	3952346	.	-	0	ID=GCA000153685_03703;Name=steroid C26-monooxygenase Cyp142;locus_tag=GCA000153685_03703;product=steroid C26-monooxygenase Cyp142;Dbxref=GO:0005506,GO:0006707,GO:0008395,GO:0009274,GO:0020037,GO:0031073,GO:0036199;gene=cyp142;Parent=GCA000153685_03703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900082,BlastRules:WP_011730892,KEGG:K16046,RefSeq:WP_003900082.1,SO:0001217,UniParc:UPI0000126BBF,UniRef:UniRef100_P9WPL5,UniRef:UniRef50_P9WPL5,UniRef:UniRef90_P9WPL5;ec_number=1.14.15.28
contig_1	Pyrodigal	gene	3952375	3953085	.	+	.	ID=GCA000153685_03704_gene;locus_tag=GCA000153685_03704
contig_1	Pyrodigal	CDS	3952375	3953085	.	+	0	ID=GCA000153685_03704;Name=Acetoacetate decarboxylase;locus_tag=GCA000153685_03704;product=Acetoacetate decarboxylase;Parent=GCA000153685_03704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419190.1,SO:0001217,UniParc:UPI00000C1543,UniRef:UniRef100_O53564,UniRef:UniRef50_O53564,UniRef:UniRef90_O53564
contig_1	Pyrodigal	gene	3953150	3954181	.	-	.	ID=GCA000153685_03705_gene;locus_tag=GCA000153685_03705
contig_1	Pyrodigal	CDS	3953150	3954181	.	-	0	ID=GCA000153685_03705;Name=Putative coenzyme F420-dependent oxidoreductase Rv3520c;locus_tag=GCA000153685_03705;product=Putative coenzyme F420-dependent oxidoreductase Rv3520c;Dbxref=GO:0005886,GO:0009274,GO:0016705;Parent=GCA000153685_03705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00320,RefSeq:WP_003419192.1,SO:0001217,UniParc:UPI00001651BF,UniRef:UniRef100_O53565,UniRef:UniRef50_O53565,UniRef:UniRef90_O53565;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3954253	3955257	.	+	.	ID=GCA000153685_03706_gene;locus_tag=GCA000153685_03706
contig_1	Pyrodigal	CDS	3954253	3955257	.	+	0	ID=GCA000153685_03706;Name=DUF35 domain-containing protein;locus_tag=GCA000153685_03706;product=DUF35 domain-containing protein;Parent=GCA000153685_03706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900085.1,SO:0001217,UniParc:UPI00000D2DA0,UniRef:UniRef100_A0A0H3LJG0,UniRef:UniRef50_A0A2T0M396,UniRef:UniRef90_O53566
contig_1	Pyrodigal	gene	3955273	3956337	.	+	.	ID=GCA000153685_03707_gene;locus_tag=GCA000153685_03707
contig_1	Pyrodigal	CDS	3955273	3956337	.	+	0	ID=GCA000153685_03707;Name=Lipid transfer protein or keto acyl-CoA thiolase LTP4;locus_tag=GCA000153685_03707;product=Lipid transfer protein or keto acyl-CoA thiolase LTP4;Parent=GCA000153685_03707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419199.1,SO:0001217,UniParc:UPI00001651C0,UniRef:UniRef100_A0A1R3Y4H2,UniRef:UniRef50_A0A7Z7IS55,UniRef:UniRef90_A0A655ADP6
contig_1	Pyrodigal	gene	3956354	3956782	.	+	.	ID=GCA000153685_03708_gene;locus_tag=GCA000153685_03708
contig_1	Pyrodigal	CDS	3956354	3956782	.	+	0	ID=GCA000153685_03708;Name=Keto acyl-CoA thiolase Ltp3;locus_tag=GCA000153685_03708;product=Keto acyl-CoA thiolase Ltp3;Parent=GCA000153685_03708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D329,UniRef:UniRef100_A5U8J7,UniRef:UniRef50_N0CGN6,UniRef:UniRef90_A5U8J7
contig_1	Pyrodigal	gene	3956843	3957538	.	+	.	ID=GCA000153685_03709_gene;locus_tag=GCA000153685_03709
contig_1	Pyrodigal	CDS	3956843	3957538	.	+	0	ID=GCA000153685_03709;Name=Keto acyl-CoA thiolase Ltp3;locus_tag=GCA000153685_03709;product=Keto acyl-CoA thiolase Ltp3;Parent=GCA000153685_03709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D32A,UniRef:UniRef100_A5U8J7,UniRef:UniRef50_N0CGN6,UniRef:UniRef90_A5U8J7
contig_1	Pyrodigal	gene	3957685	3958611	.	+	.	ID=GCA000153685_03710_gene;locus_tag=GCA000153685_03710
contig_1	Pyrodigal	CDS	3957685	3958611	.	+	0	ID=GCA000153685_03710;Name=Conserved membrane protein of putative function;locus_tag=GCA000153685_03710;product=Conserved membrane protein of putative function;Parent=GCA000153685_03710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005295EE,UniRef:UniRef100_A0A0H3LEZ1,UniRef:UniRef50_A0A3E2MTH1,UniRef:UniRef90_A0A655IZM2
contig_1	Pyrodigal	gene	3958625	3959149	.	-	.	ID=GCA000153685_03711_gene;locus_tag=GCA000153685_03711;gene=paaY
contig_1	Pyrodigal	CDS	3958625	3959149	.	-	0	ID=GCA000153685_03711;Name=Gamma carbonic anhydrase family protein;locus_tag=GCA000153685_03711;product=Gamma carbonic anhydrase family protein;gene=paaY;Parent=GCA000153685_03711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0663,COG:R,RefSeq:WP_003419208.1,SO:0001217,UniParc:UPI00000D5E13,UniRef:UniRef100_I6YCB9,UniRef:UniRef50_A0A1A9GJT8,UniRef:UniRef90_B2HI18
contig_1	Pyrodigal	gene	3959264	3960424	.	+	.	ID=GCA000153685_03712_gene;locus_tag=GCA000153685_03712;gene=kshA
contig_1	Pyrodigal	CDS	3959264	3960424	.	+	0	ID=GCA000153685_03712;Name=3-ketosteroid-9-alpha-hydroxylase subunit KshA;locus_tag=GCA000153685_03712;product=3-ketosteroid-9-alpha-hydroxylase subunit KshA;Dbxref=GO:0005506,GO:0005737,GO:0006694,GO:0006707,GO:0016491,GO:0036200,GO:0047086,GO:0051537,GO:0070207,GO:0070723;gene=kshA;Parent=GCA000153685_03712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419211,RefSeq:WP_003419211.1,SO:0001217,UniParc:UPI00000C14EB,UniRef:UniRef100_P71875,UniRef:UniRef50_P71875,UniRef:UniRef90_P71875;ec_number=1.14.15.30
contig_1	Pyrodigal	gene	3960430	3960879	.	+	.	ID=GCA000153685_03713_gene;locus_tag=GCA000153685_03713
contig_1	Pyrodigal	CDS	3960430	3960879	.	+	0	ID=GCA000153685_03713;Name=Ferredoxin;locus_tag=GCA000153685_03713;product=Ferredoxin;Parent=GCA000153685_03713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419215.1,SO:0001217,UniParc:UPI00000D1036,UniRef:UniRef100_I6XHG6,UniRef:UniRef50_A0A172UJR6,UniRef:UniRef90_I6XHG6
contig_1	Pyrodigal	gene	3961304	3962014	.	-	.	ID=GCA000153685_03714_gene;locus_tag=GCA000153685_03714
contig_1	Pyrodigal	CDS	3961304	3962014	.	-	0	ID=GCA000153685_03714;Name=Methyltransferase;locus_tag=GCA000153685_03714;product=Methyltransferase;Parent=GCA000153685_03714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D8DBA6,UniRef:UniRef100_I6YGE4,UniRef:UniRef50_I6YGE4,UniRef:UniRef90_I6YGE4
contig_1	Pyrodigal	gene	3962248	3962445	.	+	.	ID=GCA000153685_03715_gene;locus_tag=GCA000153685_03715
contig_1	Pyrodigal	CDS	3962248	3962445	.	+	0	ID=GCA000153685_03715;Name=IS21 family transposase;locus_tag=GCA000153685_03715;product=IS21 family transposase;Parent=GCA000153685_03715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003908266.1,SO:0001217,UniParc:UPI00000D2DA3,UniRef:UniRef100_A0A0H3LJH3,UniRef:UniRef50_A0A0H3LJH3,UniRef:UniRef90_A0A0H3LJH3
contig_1	Pyrodigal	gene	3962709	3963566	.	-	.	ID=GCA000153685_03716_gene;locus_tag=GCA000153685_03716
contig_1	Pyrodigal	CDS	3962709	3963566	.	-	0	ID=GCA000153685_03716;Name=Sulfotransferase family protein;locus_tag=GCA000153685_03716;product=Sulfotransferase family protein;Parent=GCA000153685_03716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000252D32B,UniRef:UniRef100_A0A0H3LM62,UniRef:UniRef50_A0A0H3LM62,UniRef:UniRef90_A0A0H3LM62
contig_1	Pyrodigal	gene	3963636	3963863	.	-	.	ID=GCA000153685_03717_gene;locus_tag=GCA000153685_03717
contig_1	Pyrodigal	CDS	3963636	3963863	.	-	0	ID=GCA000153685_03717;Name=Sulfotransferase;locus_tag=GCA000153685_03717;product=Sulfotransferase;Parent=GCA000153685_03717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A7CA4B,UniRef:UniRef100_I6YCC4,UniRef:UniRef50_C1A214,UniRef:UniRef90_I6YCC4
contig_1	Pyrodigal	gene	3963863	3964645	.	-	.	ID=GCA000153685_03718_gene;locus_tag=GCA000153685_03718
contig_1	Pyrodigal	CDS	3963863	3964645	.	-	0	ID=GCA000153685_03718;Name=putative oxidoreductase;locus_tag=GCA000153685_03718;product=putative oxidoreductase;Parent=GCA000153685_03718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419223.1,SO:0001217,UniParc:UPI00000D5F51,UniRef:UniRef100_I6Y3S9,UniRef:UniRef50_A0A1U2YZL4,UniRef:UniRef90_I6Y3S9
contig_1	Pyrodigal	gene	3964642	3965769	.	-	.	ID=GCA000153685_03719_gene;locus_tag=GCA000153685_03719
contig_1	Pyrodigal	CDS	3964642	3965769	.	-	0	ID=GCA000153685_03719;Name=DUF1214 domain-containing protein;locus_tag=GCA000153685_03719;product=DUF1214 domain-containing protein;Parent=GCA000153685_03719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900087.1,SO:0001217,UniParc:UPI00000D0FBF,UniRef:UniRef100_I6XHH2,UniRef:UniRef50_I6XHH2,UniRef:UniRef90_I6XHH2
contig_1	Pyrodigal	gene	3966168	3967388	.	+	.	ID=GCA000153685_03720_gene;locus_tag=GCA000153685_03720;gene=pPE61
contig_1	Pyrodigal	CDS	3966168	3967388	.	+	0	ID=GCA000153685_03720;Name=putative PPE family protein PPE61;locus_tag=GCA000153685_03720;product=putative PPE family protein PPE61;Dbxref=GO:0052572;gene=pPE61;Parent=GCA000153685_03720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419226.1,SO:0001217,UniParc:UPI00000CCBD8,UniRef:UniRef100_P9WHX9,UniRef:UniRef50_P9WHY3,UniRef:UniRef90_P9WHX9
contig_1	Pyrodigal	gene	3967530	3969278	.	-	.	ID=GCA000153685_03721_gene;locus_tag=GCA000153685_03721;gene=pPE62
contig_1	Pyrodigal	CDS	3967530	3969278	.	-	0	ID=GCA000153685_03721;Name=putative PPE family protein PPE62;locus_tag=GCA000153685_03721;product=putative PPE family protein PPE62;Dbxref=GO:0052572;gene=pPE62;Parent=GCA000153685_03721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015345197.1,SO:0001217,UniParc:UPI000252D32E,UniRef:UniRef100_A0A0H3LM87,UniRef:UniRef50_P9WHX7,UniRef:UniRef90_P9WHX7
contig_1	Pyrodigal	gene	3969377	3970417	.	-	.	ID=GCA000153685_03722_gene;locus_tag=GCA000153685_03722;gene=dmpG
contig_1	Pyrodigal	CDS	3969377	3970417	.	-	0	ID=GCA000153685_03722;Name=4-hydroxy-2-oxovalerate aldolase;locus_tag=GCA000153685_03722;product=4-hydroxy-2-oxovalerate aldolase;Dbxref=GO:0003852,GO:0008701,GO:0009056,GO:0009098,GO:0009274,GO:0030145;gene=dmpG;Parent=GCA000153685_03722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,KEGG:K01666,RefSeq:WP_003900709.1,SO:0001217,UniParc:UPI0001277FE7,UniRef:UniRef100_A0A0H3LF08,UniRef:UniRef50_P9WMK5,UniRef:UniRef90_P9WMK5;ec_number=4.1.3.43
contig_1	Pyrodigal	gene	3970414	3971325	.	-	.	ID=GCA000153685_03723_gene;locus_tag=GCA000153685_03723;gene=hsaG
contig_1	Pyrodigal	CDS	3970414	3971325	.	-	0	ID=GCA000153685_03723;Name=acetaldehyde dehydrogenase (acetylating);locus_tag=GCA000153685_03723;product=acetaldehyde dehydrogenase (acetylating);Dbxref=GO:0008774,GO:0009056,GO:0051287;gene=hsaG;Parent=GCA000153685_03723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419251.1,SO:0001217,UniParc:UPI00000D5FFC,UniRef:UniRef100_P9WQH3,UniRef:UniRef50_P9WQH3,UniRef:UniRef90_P9WQH3;ec_number=1.2.1.87
contig_1	Pyrodigal	gene	3971336	3972121	.	-	.	ID=GCA000153685_03724_gene;locus_tag=GCA000153685_03724
contig_1	Pyrodigal	CDS	3971336	3972121	.	-	0	ID=GCA000153685_03724;Name=2-keto-4-pentenoate hydratase;locus_tag=GCA000153685_03724;product=2-keto-4-pentenoate hydratase;Parent=GCA000153685_03724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419252.1,SO:0001217,UniParc:UPI00000D5F4B,UniRef:UniRef100_A5U8L0,UniRef:UniRef50_A5U8L0,UniRef:UniRef90_A5U8L0
contig_1	Pyrodigal	gene	3972194	3973885	.	+	.	ID=GCA000153685_03725_gene;locus_tag=GCA000153685_03725;gene=kstD
contig_1	Pyrodigal	CDS	3972194	3973885	.	+	0	ID=GCA000153685_03725;Name=3-oxosteroid 1-dehydrogenase;locus_tag=GCA000153685_03725;product=3-oxosteroid 1-dehydrogenase;Dbxref=GO:0005737,GO:0005886,GO:0006694,GO:0006707,GO:0016042,GO:0047571;gene=kstD;Parent=GCA000153685_03725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419253.1,SO:0001217,UniParc:UPI0000165363,UniRef:UniRef100_P71864,UniRef:UniRef50_P71864,UniRef:UniRef90_P71864;ec_number=1.3.99.4
contig_1	Pyrodigal	gene	3973887	3974747	.	+	.	ID=GCA000153685_03726_gene;locus_tag=GCA000153685_03726;gene=chsH3
contig_1	Pyrodigal	CDS	3973887	3974747	.	+	0	ID=GCA000153685_03726;Name=Enoyl-CoA hydratase ChsH3;locus_tag=GCA000153685_03726;product=Enoyl-CoA hydratase ChsH3;Dbxref=GO:0003857,GO:0004300,GO:0005886,GO:0006635,GO:0006707,GO:0044594;gene=chsH3;Parent=GCA000153685_03726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419285.1,SO:0001217,UniParc:UPI00000D500E,UniRef:UniRef100_Q6MWW2,UniRef:UniRef50_Q6MWW2,UniRef:UniRef90_Q6MWW2;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3974884	3976323	.	+	.	ID=GCA000153685_03727_gene;locus_tag=GCA000153685_03727;gene=pPE63
contig_1	Pyrodigal	CDS	3974884	3976323	.	+	0	ID=GCA000153685_03727;Name=putative PPE family protein PPE63;locus_tag=GCA000153685_03727;product=putative PPE family protein PPE63;Dbxref=GO:0005886,GO:0052572;gene=pPE63;Parent=GCA000153685_03727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900090.1,SO:0001217,UniParc:UPI00000D5E6C,UniRef:UniRef100_P9WHX5,UniRef:UniRef50_P9WHX5,UniRef:UniRef90_P9WHX5
contig_1	Pyrodigal	gene	3976324	3977484	.	-	.	ID=GCA000153685_03728_gene;locus_tag=GCA000153685_03728;gene=ltp2
contig_1	Pyrodigal	CDS	3976324	3977484	.	-	0	ID=GCA000153685_03728;Name=17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase;locus_tag=GCA000153685_03728;product=17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase;Dbxref=GO:0006707,GO:0016746,GO:0016747,GO:0016829;gene=ltp2;Parent=GCA000153685_03728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,KEGG:K25623,RefSeq:WP_003419287.1,SO:0001217,UniParc:UPI00000D5E1E,UniRef:UniRef100_I6Y3T7,UniRef:UniRef50_I6Y3T7,UniRef:UniRef90_I6Y3T7;ec_number=4.1.3.-
contig_1	Pyrodigal	gene	3977484	3977873	.	-	.	ID=GCA000153685_03729_gene;locus_tag=GCA000153685_03729;gene=chsH1
contig_1	Pyrodigal	CDS	3977484	3977873	.	-	0	ID=GCA000153685_03729;Name=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;locus_tag=GCA000153685_03729;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;Dbxref=GO:0006707,GO:0016829;gene=chsH1;Parent=GCA000153685_03729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419290,RefSeq:WP_003419290.1,SO:0001217,UniParc:UPI00000D114D,UniRef:UniRef100_I6XHI0,UniRef:UniRef50_I6XHI0,UniRef:UniRef90_I6XHI0;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3977870	3978805	.	-	.	ID=GCA000153685_03730_gene;locus_tag=GCA000153685_03730;gene=chsH2
contig_1	Pyrodigal	CDS	3977870	3978805	.	-	0	ID=GCA000153685_03730;Name=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;locus_tag=GCA000153685_03730;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;Dbxref=GO:0006707,GO:0016829;gene=chsH2;Parent=GCA000153685_03730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419293,KEGG:K25621,RefSeq:WP_003419293.1,SO:0001217,UniParc:UPI00000D113C,UniRef:UniRef100_I6YGF8,UniRef:UniRef50_I6YGF8,UniRef:UniRef90_I6YGF8;ec_number=4.2.1.-
contig_1	Pyrodigal	gene	3978802	3979965	.	-	.	ID=GCA000153685_03731_gene;locus_tag=GCA000153685_03731;gene=fadE29
contig_1	Pyrodigal	CDS	3978802	3979965	.	-	0	ID=GCA000153685_03731;Name=Acyl-CoA dehydrogenase FadE29;locus_tag=GCA000153685_03731;product=Acyl-CoA dehydrogenase FadE29;Dbxref=GO:0006707,GO:0016627,GO:0033539,GO:0051701,GO:0071949;gene=fadE29;Parent=GCA000153685_03731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22822,RefSeq:WP_003419296.1,SO:0001217,UniParc:UPI00000D500D,UniRef:UniRef100_P71858,UniRef:UniRef50_P71858,UniRef:UniRef90_P71858;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3979950	3980969	.	-	.	ID=GCA000153685_03732_gene;locus_tag=GCA000153685_03732;gene=fadE28
contig_1	Pyrodigal	CDS	3979950	3980969	.	-	0	ID=GCA000153685_03732;Name=acyl-CoA dehydrogenase FadE28;locus_tag=GCA000153685_03732;product=acyl-CoA dehydrogenase FadE28;Dbxref=GO:0003995,GO:0006707,GO:0009268,GO:0033539,GO:0051701,GO:0071949;gene=fadE28;Parent=GCA000153685_03732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419299,RefSeq:WP_003419299.1,SO:0001217,UniParc:UPI0000165364,UniRef:UniRef100_P71857,UniRef:UniRef50_P71857,UniRef:UniRef90_P71857;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3980969	3982222	.	-	.	ID=GCA000153685_03733_gene;locus_tag=GCA000153685_03733;gene=cyp125
contig_1	Pyrodigal	CDS	3980969	3982222	.	-	0	ID=GCA000153685_03733;Name=steroid C26-monooxygenase Cyp125;locus_tag=GCA000153685_03733;product=steroid C26-monooxygenase Cyp125;Dbxref=GO:0005506,GO:0006707,GO:0008395,GO:0020037,GO:0036199,GO:0051701;gene=cyp125;Parent=GCA000153685_03733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_009938697,COG:COG2124,COG:QV,KEGG:K15981,RefSeq:WP_003912260.1,SO:0001217,UniParc:UPI00005EE878,UniRef:UniRef100_A0A0H3LF33,UniRef:UniRef50_P9WPP1,UniRef:UniRef90_P9WPP1;ec_number=1.14.15.29
contig_1	Pyrodigal	gene	3982382	3983557	.	+	.	ID=GCA000153685_03734_gene;locus_tag=GCA000153685_03734;gene=fadA5
contig_1	Pyrodigal	CDS	3982382	3983557	.	+	0	ID=GCA000153685_03734;Name=steroid 3-ketoacyl-CoA thiolase;locus_tag=GCA000153685_03734;product=steroid 3-ketoacyl-CoA thiolase;Dbxref=GO:0003988,GO:0006635,GO:0006707,GO:0010124,GO:0042802;gene=fadA5;Parent=GCA000153685_03734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419307.1,SO:0001217,UniParc:UPI00000D5FED,UniRef:UniRef100_I6XHI4,UniRef:UniRef50_I6XHI4,UniRef:UniRef90_I6XHI4;ec_number=2.3.1.16
contig_1	Pyrodigal	gene	3983669	3984124	.	+	.	ID=GCA000153685_03735_gene;locus_tag=GCA000153685_03735;gene=ddn
contig_1	Pyrodigal	CDS	3983669	3984124	.	+	0	ID=GCA000153685_03735;Name=deazaflavin-dependent nitroreductase Ddn;locus_tag=GCA000153685_03735;product=deazaflavin-dependent nitroreductase Ddn;Dbxref=GO:0005886,GO:0009274,GO:0016491,GO:0070967;gene=ddn;Parent=GCA000153685_03735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419309,KEGG:K00540,RefSeq:WP_003419309.1,SO:0001217,UniParc:UPI00000D0FCA,UniRef:UniRef100_P9WP15,UniRef:UniRef50_P9WP15,UniRef:UniRef90_P9WP15;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	3984207	3985121	.	-	.	ID=GCA000153685_03736_gene;locus_tag=GCA000153685_03736
contig_1	Pyrodigal	CDS	3984207	3985121	.	-	0	ID=GCA000153685_03736;Name=Short-chain type dehydrogenase/reductase;locus_tag=GCA000153685_03736;product=Short-chain type dehydrogenase/reductase;Parent=GCA000153685_03736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900711.1,SO:0001217,UniParc:UPI0000165365,UniRef:UniRef100_Q7D5B1,UniRef:UniRef50_A0A7R8NMV6,UniRef:UniRef90_A0A498QGA5
contig_1	Pyrodigal	gene	3985144	3985923	.	-	.	ID=GCA000153685_03737_gene;locus_tag=GCA000153685_03737
contig_1	Pyrodigal	CDS	3985144	3985923	.	-	0	ID=GCA000153685_03737;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03737;product=SDR family oxidoreductase;Dbxref=GO:0016491;Parent=GCA000153685_03737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419313.1,SO:0001217,UniParc:UPI00000D5F65,UniRef:UniRef100_A5U8M3,UniRef:UniRef50_A0A655AEZ7,UniRef:UniRef90_A0A655AEZ7
contig_1	Pyrodigal	gene	3985978	3986721	.	+	.	ID=GCA000153685_03738_gene;locus_tag=GCA000153685_03738;gene=echA20
contig_1	Pyrodigal	CDS	3985978	3986721	.	+	0	ID=GCA000153685_03738;Name=enoyl-CoA hydratase family protein;locus_tag=GCA000153685_03738;product=enoyl-CoA hydratase family protein;Dbxref=GO:0003824,GO:0006635,GO:0006707,GO:0016829;gene=echA20;Parent=GCA000153685_03738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1024,COG:I,RefSeq:WP_003419315.1,SO:0001217,UniParc:UPI00000D5FB2,UniRef:UniRef100_I6Y3U6,UniRef:UniRef50_I6Y3U6,UniRef:UniRef90_I6Y3U6;ec_number=4.1.99.-
contig_1	Pyrodigal	gene	3986721	3987599	.	+	.	ID=GCA000153685_03739_gene;locus_tag=GCA000153685_03739;gene=ipdA
contig_1	Pyrodigal	CDS	3986721	3987599	.	+	0	ID=GCA000153685_03739;Name=Cholesterol ring-cleaving hydrolase IpdA subunit;locus_tag=GCA000153685_03739;product=Cholesterol ring-cleaving hydrolase IpdA subunit;Dbxref=GO:0006707,GO:0008410,GO:0016829,GO:0051701;gene=ipdA;Parent=GCA000153685_03739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1788,COG:I,RefSeq:WP_003900094.1,SO:0001217,UniParc:UPI000013C2CE,UniRef:UniRef100_P9WPW1,UniRef:UniRef50_P9WPW1,UniRef:UniRef90_P9WPW1;ec_number=4.1.99.-
contig_1	Pyrodigal	gene	3987596	3988348	.	+	.	ID=GCA000153685_03740_gene;locus_tag=GCA000153685_03740;gene=ipdB
contig_1	Pyrodigal	CDS	3987596	3988348	.	+	0	ID=GCA000153685_03740;Name=Cholesterol ring-cleaving hydrolase IpdB subunit;locus_tag=GCA000153685_03740;product=Cholesterol ring-cleaving hydrolase IpdB subunit;Dbxref=GO:0006707,GO:0008410,GO:0016829,GO:0051701;gene=ipdB;Parent=GCA000153685_03740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419321.1,SO:0001217,UniParc:UPI000013C2CF,UniRef:UniRef100_P9WPV9,UniRef:UniRef50_Q0S7Q0,UniRef:UniRef90_P9WPV9;ec_number=4.1.99.-
contig_1	Pyrodigal	gene	3988446	3989513	.	+	.	ID=GCA000153685_03741_gene;locus_tag=GCA000153685_03741;gene=ipdC
contig_1	Pyrodigal	CDS	3988446	3989513	.	+	0	ID=GCA000153685_03741;Name=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;locus_tag=GCA000153685_03741;product=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;Dbxref=GO:0000166,GO:0005886,GO:0006707,GO:0018580;gene=ipdC;Parent=GCA000153685_03741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419324.1,SO:0001217,UniParc:UPI0000165366,UniRef:UniRef100_P71847,UniRef:UniRef50_P71847,UniRef:UniRef90_P71847;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	3989549	3991567	.	+	.	ID=GCA000153685_03742_gene;locus_tag=GCA000153685_03742
contig_1	Pyrodigal	CDS	3989549	3991567	.	+	0	ID=GCA000153685_03742;Name=Electron transfer protein FDXB;locus_tag=GCA000153685_03742;product=Electron transfer protein FDXB;Parent=GCA000153685_03742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02613,SO:0001217,UniParc:UPI00001651C4,UniRef:UniRef100_P71846,UniRef:UniRef50_A0A0T9Y9F9,UniRef:UniRef90_A0A0T9Y9F9
contig_1	Pyrodigal	gene	3991655	3992524	.	-	.	ID=GCA000153685_03743_gene;locus_tag=GCA000153685_03743
contig_1	Pyrodigal	CDS	3991655	3992524	.	-	0	ID=GCA000153685_03743;Name=DUF559 domain-containing protein;locus_tag=GCA000153685_03743;product=DUF559 domain-containing protein;Parent=GCA000153685_03743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900096.1,SO:0001217,UniParc:UPI00000C14C0,UniRef:UniRef100_P96837,UniRef:UniRef50_A0A5A7Y0J4,UniRef:UniRef90_A0A9P2H3R1
contig_1	Pyrodigal	gene	3992629	3993789	.	-	.	ID=GCA000153685_03744_gene;locus_tag=GCA000153685_03744;gene=fadA6
contig_1	Pyrodigal	CDS	3992629	3993789	.	-	0	ID=GCA000153685_03744;Name=acetyl-CoA C-acetyltransferase;locus_tag=GCA000153685_03744;product=acetyl-CoA C-acetyltransferase;Dbxref=GO:0003988,GO:0006707,GO:0016747;gene=fadA6;Parent=GCA000153685_03744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_003419328.1,SO:0001217,UniParc:UPI00000D603F,UniRef:UniRef100_I6XHJ3,UniRef:UniRef50_I6XHJ3,UniRef:UniRef90_I6XHJ3;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	3993854	3994456	.	-	.	ID=GCA000153685_03745_gene;locus_tag=GCA000153685_03745;gene=kstR2
contig_1	Pyrodigal	CDS	3993854	3994456	.	-	0	ID=GCA000153685_03745;Name=TetR family transcriptional regulator KstR2;locus_tag=GCA000153685_03745;product=TetR family transcriptional regulator KstR2;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355;gene=kstR2;Parent=GCA000153685_03745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419329,RefSeq:WP_003419329.1,SO:0001217,UniParc:UPI00000D601D,UniRef:UniRef100_P9WMB9,UniRef:UniRef50_P9WMB9,UniRef:UniRef90_P9WMB9
contig_1	Pyrodigal	gene	3994805	3996463	.	+	.	ID=GCA000153685_03746_gene;locus_tag=GCA000153685_03746
contig_1	Pyrodigal	CDS	3994805	3996463	.	+	0	ID=GCA000153685_03746;Name=PPE domain-containing protein;locus_tag=GCA000153685_03746;product=PPE domain-containing protein;Parent=GCA000153685_03746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419334.1,SO:0001217,UniParc:UPI00000C157A,UniRef:UniRef100_Q6MWW0,UniRef:UniRef50_A0A0Q2M591,UniRef:UniRef90_R4MDP3
contig_1	Pyrodigal	gene	3996472	3997260	.	-	.	ID=GCA000153685_03747_gene;locus_tag=GCA000153685_03747;gene=ipdF
contig_1	Pyrodigal	CDS	3996472	3997260	.	-	0	ID=GCA000153685_03747;Name=SDR family oxidoreductase;locus_tag=GCA000153685_03747;product=SDR family oxidoreductase;Dbxref=GO:0006707,GO:0016491,GO:0016616,GO:0030497;gene=ipdF;Parent=GCA000153685_03747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_003900097.1,SO:0001217,UniParc:UPI00000D5FAF,UniRef:UniRef100_I6YCF0,UniRef:UniRef50_I6YCF0,UniRef:UniRef90_I6YCF0;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	3997257	3998414	.	-	.	ID=GCA000153685_03748_gene;locus_tag=GCA000153685_03748;gene=ipdE1
contig_1	Pyrodigal	CDS	3997257	3998414	.	-	0	ID=GCA000153685_03748;Name=Acyl-CoA dehydrogenase IpdE1;locus_tag=GCA000153685_03748;product=Acyl-CoA dehydrogenase IpdE1;Dbxref=GO:0006707,GO:0016627,GO:0050660;gene=ipdE1;Parent=GCA000153685_03748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419340.1,SO:0001217,UniParc:UPI00000D5E88,UniRef:UniRef100_I6Y3V5,UniRef:UniRef50_I6Y3V5,UniRef:UniRef90_I6Y3V5;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	3998462	3999985	.	+	.	ID=GCA000153685_03749_gene;locus_tag=GCA000153685_03749;gene=fadD3
contig_1	Pyrodigal	CDS	3998462	3999985	.	+	0	ID=GCA000153685_03749;Name=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase;locus_tag=GCA000153685_03749;product=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase;Dbxref=GO:0005524,GO:0008203,GO:0016405;gene=fadD3;Parent=GCA000153685_03749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900098,RefSeq:WP_003900098.1,SO:0001217,UniParc:UPI00000D503D,UniRef:UniRef100_P96843,UniRef:UniRef50_P96843,UniRef:UniRef90_P96843;ec_number=6.2.1.41
contig_1	Pyrodigal	gene	3999986	4001119	.	+	.	ID=GCA000153685_03750_gene;locus_tag=GCA000153685_03750;gene=caiA
contig_1	Pyrodigal	CDS	3999986	4001119	.	+	0	ID=GCA000153685_03750;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_03750;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000153685_03750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_003419346.1,SO:0001217,UniParc:UPI00000D5E54,UniRef:UniRef100_A5U8N6,UniRef:UniRef50_A0A5B7V3I9,UniRef:UniRef90_A0A1X0LAB6
contig_1	Pyrodigal	gene	4001122	4002075	.	+	.	ID=GCA000153685_03751_gene;locus_tag=GCA000153685_03751
contig_1	Pyrodigal	CDS	4001122	4002075	.	+	0	ID=GCA000153685_03751;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000153685_03751;product=Acyl-CoA dehydrogenase;Parent=GCA000153685_03751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001651C6,UniRef:UniRef100_A5U8N7,UniRef:UniRef50_A0A0N9YCM5,UniRef:UniRef90_A0A655AMY1
contig_1	Pyrodigal	gene	4002072	4003028	.	+	.	ID=GCA000153685_03752_gene;locus_tag=GCA000153685_03752;gene=ipdE2
contig_1	Pyrodigal	CDS	4002072	4003028	.	+	0	ID=GCA000153685_03752;Name=Acyl-CoA dehydrogenase IpdE2;locus_tag=GCA000153685_03752;product=Acyl-CoA dehydrogenase IpdE2;Dbxref=GO:0003995,GO:0006707,GO:0050660;gene=ipdE2;Parent=GCA000153685_03752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419352.1,SO:0001217,UniParc:UPI00000D5E4B,UniRef:UniRef100_I6YCF5,UniRef:UniRef50_I6YCF5,UniRef:UniRef90_I6YCF5;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	4003025	4004191	.	+	.	ID=GCA000153685_03753_gene;locus_tag=GCA000153685_03753;gene=aspB
contig_1	Pyrodigal	CDS	4003025	4004191	.	+	0	ID=GCA000153685_03753;Name=Valine--pyruvate aminotransferase;locus_tag=GCA000153685_03753;product=Valine--pyruvate aminotransferase;Dbxref=GO:0006520,GO:0009042,GO:0009058,GO:0009274,GO:0030170;gene=aspB;Parent=GCA000153685_03753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419356.1,SO:0001217,UniParc:UPI00000C1591,UniRef:UniRef100_P96847,UniRef:UniRef50_P96847,UniRef:UniRef90_P96847;ec_number=2.6.1.66
contig_1	Pyrodigal	gene	4004156	4005007	.	-	.	ID=GCA000153685_03754_gene;locus_tag=GCA000153685_03754;gene=nat
contig_1	Pyrodigal	CDS	4004156	4005007	.	-	0	ID=GCA000153685_03754;Name=arylamine N-acetyltransferase;locus_tag=GCA000153685_03754;product=arylamine N-acetyltransferase;Dbxref=GO:0004060,GO:0005886,GO:0046677;gene=nat;Parent=GCA000153685_03754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419364,KEGG:K00622,RefSeq:WP_003419364.1,SO:0001217,UniParc:UPI0000031D98,UniRef:UniRef100_P9WJI5,UniRef:UniRef50_P9WJI5,UniRef:UniRef90_P9WJI5;ec_number=2.3.1.5
contig_1	Pyrodigal	gene	4005544	4006107	.	-	.	ID=GCA000153685_03755_gene;locus_tag=GCA000153685_03755;gene=hsaB
contig_1	Pyrodigal	CDS	4005544	4006107	.	-	0	ID=GCA000153685_03755;Name=flavin-dependent monooxygenase reductase subunit HsaB;locus_tag=GCA000153685_03755;product=flavin-dependent monooxygenase reductase subunit HsaB;Dbxref=GO:0006694,GO:0006707,GO:0009056,GO:0010181,GO:0016042,GO:0016646,GO:0036382,GO:0042602,GO:0050660;gene=hsaB;Parent=GCA000153685_03755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900713,RefSeq:WP_003900713.1,SO:0001217,UniParc:UPI00000D5ED3,UniRef:UniRef100_P9WND9,UniRef:UniRef50_P9WND9,UniRef:UniRef90_P9WND9;ec_number=1.5.1.36
contig_1	Pyrodigal	gene	4006122	4007024	.	-	.	ID=GCA000153685_03756_gene;locus_tag=GCA000153685_03756;gene=hsaC
contig_1	Pyrodigal	CDS	4006122	4007024	.	-	0	ID=GCA000153685_03756;Name=iron-dependent extradiol dioxygenase HsaC;locus_tag=GCA000153685_03756;product=iron-dependent extradiol dioxygenase HsaC;Dbxref=GO:0005506,GO:0006707,GO:0008198,GO:0009056,GO:0016042,GO:0047071,GO:0070723;gene=hsaC;Parent=GCA000153685_03756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419378,COG:COG0346,COG:Q,KEGG:K16049,RefSeq:WP_003419378.1,SO:0001217,UniParc:UPI00000D5E74,UniRef:UniRef100_P9WNW7,UniRef:UniRef50_P9WNW7,UniRef:UniRef90_P9WNW7;ec_number=1.13.11.25
contig_1	Pyrodigal	gene	4007021	4007896	.	-	.	ID=GCA000153685_03757_gene;locus_tag=GCA000153685_03757;gene=hsaD
contig_1	Pyrodigal	CDS	4007021	4007896	.	-	0	ID=GCA000153685_03757;Name=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;locus_tag=GCA000153685_03757;product=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;Dbxref=GO:0005886,GO:0006694,GO:0009056,GO:0009274,GO:0016042,GO:0018774,GO:0051701,GO:0102296;gene=hsaD;Parent=GCA000153685_03757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16050,RefSeq:WP_003419381.1,SO:0001217,UniParc:UPI00000D605C,UniRef:UniRef100_P9WNH5,UniRef:UniRef50_P9WNH5,UniRef:UniRef90_P9WNH5;ec_number=3.7.1.8
contig_1	Pyrodigal	gene	4007911	4009095	.	-	.	ID=GCA000153685_03758_gene;locus_tag=GCA000153685_03758;gene=hsaA
contig_1	Pyrodigal	CDS	4007911	4009095	.	-	0	ID=GCA000153685_03758;Name=flavin-dependent monooxygenase oxygenase subunit HsaA;locus_tag=GCA000153685_03758;product=flavin-dependent monooxygenase oxygenase subunit HsaA;Dbxref=GO:0003995,GO:0005737,GO:0005886,GO:0006694,GO:0006707,GO:0009056,GO:0016042,GO:0016712,GO:0033539,GO:0036383,GO:0050660,GO:0051701;gene=hsaA;Parent=GCA000153685_03758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900101,RefSeq:WP_003900101.1,SO:0001217,UniParc:UPI00000D6048,UniRef:UniRef100_P9WJA1,UniRef:UniRef50_P9WJA1,UniRef:UniRef90_P9WJA1;ec_number=1.14.14.12
contig_1	Pyrodigal	gene	4009242	4010318	.	+	.	ID=GCA000153685_03759_gene;locus_tag=GCA000153685_03759;gene=kshB
contig_1	Pyrodigal	CDS	4009242	4010318	.	+	0	ID=GCA000153685_03759;Name=3-ketosteroid-9-alpha-hydroxylase reductase subunit;locus_tag=GCA000153685_03759;product=3-ketosteroid-9-alpha-hydroxylase reductase subunit;Dbxref=GO:0006694,GO:0008203,GO:0016042,GO:0036200,GO:0046872,GO:0050660,GO:0051537;gene=kshB;Parent=GCA000153685_03759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900102,KEGG:K15983,RefSeq:WP_003900102.1,SO:0001217,UniParc:UPI00000D5E3E,UniRef:UniRef100_P9WJ93,UniRef:UniRef50_P9WJ93,UniRef:UniRef90_P9WJ93;ec_number=1.14.15.30
contig_1	Pyrodigal	gene	4010336	4010866	.	+	.	ID=GCA000153685_03760_gene;locus_tag=GCA000153685_03760
contig_1	Pyrodigal	CDS	4010336	4010866	.	+	0	ID=GCA000153685_03760;Name=Secreted protein;locus_tag=GCA000153685_03760;product=Secreted protein;Parent=GCA000153685_03760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419389.1,SO:0001217,UniParc:UPI00000D0FD3,UniRef:UniRef100_I6X7P2,UniRef:UniRef50_A0A1A0U783,UniRef:UniRef90_I6X7P2
contig_1	Pyrodigal	gene	4010902	4013037	.	-	.	ID=GCA000153685_03761_gene;locus_tag=GCA000153685_03761;gene=fadE34
contig_1	Pyrodigal	CDS	4010902	4013037	.	-	0	ID=GCA000153685_03761;Name=Acyl-CoA dehydrogenase FadE34;locus_tag=GCA000153685_03761;product=Acyl-CoA dehydrogenase FadE34;Dbxref=GO:0005886,GO:0006707,GO:0016627,GO:0050660;gene=fadE34;Parent=GCA000153685_03761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22820,RefSeq:WP_003419394.1,SO:0001217,UniParc:UPI00000D503F,UniRef:UniRef100_P96855,UniRef:UniRef50_P96855,UniRef:UniRef90_P96855;ec_number=1.3.99.-
contig_1	Pyrodigal	gene	4013246	4013908	.	+	.	ID=GCA000153685_03762_gene;locus_tag=GCA000153685_03762;gene=kstR
contig_1	Pyrodigal	CDS	4013246	4013908	.	+	0	ID=GCA000153685_03762;Name=cholesterol catabolism transcriptional regulator KstR;locus_tag=GCA000153685_03762;product=cholesterol catabolism transcriptional regulator KstR;Dbxref=GO:0000976,GO:0003677,GO:0003700,GO:0006355,GO:0042803;gene=kstR;Parent=GCA000153685_03762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002240CDF,UniRef:UniRef100_P96856,UniRef:UniRef50_P96856,UniRef:UniRef90_P96856
contig_1	Pyrodigal	gene	4013914	4014936	.	-	.	ID=GCA000153685_03763_gene;locus_tag=GCA000153685_03763;gene=purR
contig_1	Pyrodigal	CDS	4013914	4014936	.	-	0	ID=GCA000153685_03763;Name=Transcriptional regulator%2C LacI family;locus_tag=GCA000153685_03763;product=Transcriptional regulator%2C LacI family;gene=purR;Parent=GCA000153685_03763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,SO:0001217,UniParc:UPI0001E61EA7,UniRef:UniRef100_A0A0H3LG78,UniRef:UniRef50_Q7D590,UniRef:UniRef90_Q7D590
contig_1	Pyrodigal	gene	4015183	4015896	.	+	.	ID=GCA000153685_03764_gene;locus_tag=GCA000153685_03764;gene=lppH
contig_1	Pyrodigal	CDS	4015183	4015896	.	+	0	ID=GCA000153685_03764;Name=putative conserved lipoprotein LppH;locus_tag=GCA000153685_03764;product=putative conserved lipoprotein LppH;gene=lppH;Parent=GCA000153685_03764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900105.1,SO:0001217,UniParc:UPI0000031889,UniRef:UniRef100_I6YGJ4,UniRef:UniRef50_A0A498QFB3,UniRef:UniRef90_I6YGJ4
contig_1	Pyrodigal	gene	4016033	4016953	.	+	.	ID=GCA000153685_03765_gene;locus_tag=GCA000153685_03765
contig_1	Pyrodigal	CDS	4016033	4016953	.	+	0	ID=GCA000153685_03765;Name=MBL fold metallo-hydrolase;locus_tag=GCA000153685_03765;product=MBL fold metallo-hydrolase;Parent=GCA000153685_03765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900106.1,SO:0001217,UniParc:UPI0000EF481A,UniRef:UniRef100_Q7D588,UniRef:UniRef50_A0A6I3JE68,UniRef:UniRef90_Q7D588
contig_1	Pyrodigal	gene	4017000	4018208	.	+	.	ID=GCA000153685_03766_gene;locus_tag=GCA000153685_03766
contig_1	Pyrodigal	CDS	4017000	4018208	.	+	0	ID=GCA000153685_03766;Name=Arsenical pump integral membrane protein ARSB2;locus_tag=GCA000153685_03766;product=Arsenical pump integral membrane protein ARSB2;Parent=GCA000153685_03766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03893,RefSeq:WP_009935399.1,SO:0001217,UniParc:UPI00005EE881,UniRef:UniRef100_A0A0E8WQH9,UniRef:UniRef50_I4EV97,UniRef:UniRef90_A0A0E8WQH9
contig_1	Pyrodigal	gene	4018250	4019218	.	-	.	ID=GCA000153685_03767_gene;locus_tag=GCA000153685_03767;gene=rlmB
contig_1	Pyrodigal	CDS	4018250	4019218	.	-	0	ID=GCA000153685_03767;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000153685_03767;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259;gene=rlmB;Parent=GCA000153685_03767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900107.1,SO:0001217,UniParc:UPI00000D5042,UniRef:UniRef100_P9WFY5,UniRef:UniRef50_P9WFY5,UniRef:UniRef90_P9WFY5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	4019219	4020628	.	-	.	ID=GCA000153685_03768_gene;locus_tag=GCA000153685_03768;gene=cysS
contig_1	Pyrodigal	CDS	4019219	4020628	.	-	0	ID=GCA000153685_03768;Name=cysteine--tRNA ligase;locus_tag=GCA000153685_03768;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000153685_03768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01883,RefSeq:WP_003900108.1,SO:0001217,UniParc:UPI0000136341,UniRef:UniRef100_P9WFW1,UniRef:UniRef50_P9WFW1,UniRef:UniRef90_P9WFW1;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	4020693	4021172	.	-	.	ID=GCA000153685_03769_gene;locus_tag=GCA000153685_03769;gene=ispF
contig_1	Pyrodigal	CDS	4020693	4021172	.	-	0	ID=GCA000153685_03769;Name=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;locus_tag=GCA000153685_03769;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;Dbxref=GO:0008685,GO:0016114,GO:0019288,GO:0046872;gene=ispF;Parent=GCA000153685_03769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0245,COG:I,RefSeq:WP_003419432.1,SO:0001217,UniParc:UPI000012D973,UniRef:UniRef100_P9WKG5,UniRef:UniRef50_P9WKG5,UniRef:UniRef90_P9WKG5;ec_number=4.6.1.12
contig_1	Pyrodigal	gene	4021169	4021864	.	-	.	ID=GCA000153685_03770_gene;locus_tag=GCA000153685_03770;gene=ispD
contig_1	Pyrodigal	CDS	4021169	4021864	.	-	0	ID=GCA000153685_03770;Name=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;locus_tag=GCA000153685_03770;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;Dbxref=GO:0000287,GO:0002135,GO:0005886,GO:0008270,GO:0030145,GO:0050518,GO:0051484;gene=ispD;Parent=GCA000153685_03770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419436.1,SO:0001217,UniParc:UPI000012D923,UniRef:UniRef100_P9WKG9,UniRef:UniRef50_P9WKG9,UniRef:UniRef90_P9WKG9;ec_number=2.7.7.60
contig_1	Pyrodigal	gene	4021881	4022369	.	-	.	ID=GCA000153685_03771_gene;locus_tag=GCA000153685_03771;gene=carD
contig_1	Pyrodigal	CDS	4021881	4022369	.	-	0	ID=GCA000153685_03771;Name=RNA polymerase-binding transcription factor CarD;locus_tag=GCA000153685_03771;product=RNA polymerase-binding transcription factor CarD;Dbxref=GO:0009303;gene=carD;Parent=GCA000153685_03771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419482,COG:COG1329,COG:K,KEGG:K07736,RefSeq:WP_003419482.1,SO:0001217,UniParc:UPI00000D5E38,UniRef:UniRef100_P9WJG3,UniRef:UniRef50_P9WJG3,UniRef:UniRef90_P9WJG3
contig_1	Pyrodigal	gene	4022655	4023203	.	+	.	ID=GCA000153685_03772_gene;locus_tag=GCA000153685_03772;gene=lpqE
contig_1	Pyrodigal	CDS	4022655	4023203	.	+	0	ID=GCA000153685_03772;Name=Putative lipoprotein LpqE;locus_tag=GCA000153685_03772;product=Putative lipoprotein LpqE;Dbxref=GO:0005576,GO:0005886,GO:0009274;gene=lpqE;Parent=GCA000153685_03772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900715.1,SO:0001217,UniParc:UPI000012E87A,UniRef:UniRef100_P9WK63,UniRef:UniRef50_P9WK63,UniRef:UniRef90_P9WK63
contig_1	Pyrodigal	gene	4023380	4024711	.	+	.	ID=GCA000153685_03773_gene;locus_tag=GCA000153685_03773;gene=radA
contig_1	Pyrodigal	CDS	4023380	4024711	.	+	0	ID=GCA000153685_03773;Name=DNA repair protein RadA;locus_tag=GCA000153685_03773;product=DNA repair protein RadA;Dbxref=GO:0000725,GO:0003684,GO:0005524,GO:0005829,GO:0006281,GO:0016887,GO:0046872,GO:0140664;gene=radA;Parent=GCA000153685_03773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003A36A47,UniRef:UniRef100_A0A0E9AQW7,UniRef:UniRef50_P9WHJ9,UniRef:UniRef90_P9WHJ9;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	4024716	4025792	.	+	.	ID=GCA000153685_03774_gene;locus_tag=GCA000153685_03774;gene=disA
contig_1	Pyrodigal	CDS	4024716	4025792	.	+	0	ID=GCA000153685_03774;Name=DNA integrity scanning diadenylate cyclase DisA;locus_tag=GCA000153685_03774;product=DNA integrity scanning diadenylate cyclase DisA;Dbxref=GO:0003677,GO:0004016,GO:0005524,GO:0006281,GO:0106408;gene=disA;Parent=GCA000153685_03774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07067,RefSeq:WP_003900111.1,SO:0001217,UniParc:UPI00000D0F9F,UniRef:UniRef100_P9WNW5,UniRef:UniRef50_P9WNW5,UniRef:UniRef90_P9WNW5;ec_number=2.7.7.85
contig_1	Pyrodigal	gene	4025793	4026611	.	-	.	ID=GCA000153685_03775_gene;locus_tag=GCA000153685_03775
contig_1	Pyrodigal	CDS	4025793	4026611	.	-	0	ID=GCA000153685_03775;Name=DUF4232 domain-containing protein;locus_tag=GCA000153685_03775;product=DUF4232 domain-containing protein;Parent=GCA000153685_03775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB83,UniRef:UniRef100_Q7D583,UniRef:UniRef50_A0A0T1WET4,UniRef:UniRef90_A5U8R2
contig_1	Pyrodigal	gene	4026696	4027319	.	-	.	ID=GCA000153685_03776_gene;locus_tag=GCA000153685_03776;gene=canB
contig_1	Pyrodigal	CDS	4026696	4027319	.	-	0	ID=GCA000153685_03776;Name=beta-carbonic anhydrase CanB;locus_tag=GCA000153685_03776;product=beta-carbonic anhydrase CanB;Dbxref=GO:0004089,GO:0008270,GO:0015976;gene=canB;Parent=GCA000153685_03776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419492,KEGG:K01673,RefSeq:WP_003419492.1,SO:0001217,UniParc:UPI00000D5EF6,UniRef:UniRef100_P9WPJ9,UniRef:UniRef50_P9WPJ9,UniRef:UniRef90_P9WPJ9;ec_number=4.2.1.1
contig_1	Pyrodigal	gene	4027345	4028232	.	+	.	ID=GCA000153685_03777_gene;locus_tag=GCA000153685_03777;gene=mutY
contig_1	Pyrodigal	CDS	4027345	4028232	.	+	0	ID=GCA000153685_03777;Name=Adenine DNA glycosylase;locus_tag=GCA000153685_03777;product=Adenine DNA glycosylase;Dbxref=GO:0000701,GO:0005886,GO:0006284,GO:0006298,GO:0032357,GO:0034039,GO:0035485,GO:0046872,GO:0051539;gene=mutY;Parent=GCA000153685_03777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03575,SO:0001217,UniParc:UPI0001E61EAB,UniRef:UniRef100_A0A0H3LG92,UniRef:UniRef50_A0R567,UniRef:UniRef90_P9WQ09;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	4028229	4029983	.	-	.	ID=GCA000153685_03778_gene;locus_tag=GCA000153685_03778
contig_1	Pyrodigal	CDS	4028229	4029983	.	-	0	ID=GCA000153685_03778;Name=PE-PGRS family protein PE_PGRS58;locus_tag=GCA000153685_03778;product=PE-PGRS family protein PE_PGRS58;Parent=GCA000153685_03778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_010886177.1,SO:0001217,UniParc:UPI00000D5E84,UniRef:UniRef100_I6XHM5,UniRef:UniRef50_A0A7I7NIT7,UniRef:UniRef90_I6XHM5
contig_1	Pyrodigal	gene	4030094	4030858	.	-	.	ID=GCA000153685_03779_gene;locus_tag=GCA000153685_03779
contig_1	Pyrodigal	CDS	4030094	4030858	.	-	0	ID=GCA000153685_03779;Name=Hydrolase;locus_tag=GCA000153685_03779;product=Hydrolase;Parent=GCA000153685_03779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912262.1,SO:0001217,UniParc:UPI0001B44D69,UniRef:UniRef100_I6YGL1,UniRef:UniRef50_A0A0U0R9F4,UniRef:UniRef90_A0A0U0R9F4
contig_1	Pyrodigal	gene	4030882	4031199	.	+	.	ID=GCA000153685_03780_gene;locus_tag=GCA000153685_03780;gene=mhuD
contig_1	Pyrodigal	CDS	4030882	4031199	.	+	0	ID=GCA000153685_03780;Name=mycobilin-forming heme oxygenase MhuD;locus_tag=GCA000153685_03780;product=mycobilin-forming heme oxygenase MhuD;Dbxref=GO:0004392,GO:0005886,GO:0009274,GO:0020037,GO:0042167,GO:0046872;gene=mhuD;Parent=GCA000153685_03780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419501,KEGG:K21481,RefSeq:WP_003419501.1,SO:0001217,UniParc:UPI0000033269,UniRef:UniRef100_P9WKH3,UniRef:UniRef50_P9WKH3,UniRef:UniRef90_P9WKH3;ec_number=1.14.99.57
contig_1	Pyrodigal	gene	4031219	4032535	.	+	.	ID=GCA000153685_03781_gene;locus_tag=GCA000153685_03781;gene=lpqF
contig_1	Pyrodigal	CDS	4031219	4032535	.	+	0	ID=GCA000153685_03781;Name=Conserved lipoprotein LpqF;locus_tag=GCA000153685_03781;product=Conserved lipoprotein LpqF;gene=lpqF;Parent=GCA000153685_03781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2DA9,UniRef:UniRef100_A0A0H3LJS6,UniRef:UniRef50_A0A7I7X8S1,UniRef:UniRef90_A5U8R8
contig_1	Pyrodigal	gene	4032682	4033509	.	+	.	ID=GCA000153685_03782_gene;locus_tag=GCA000153685_03782
contig_1	Pyrodigal	CDS	4032682	4033509	.	+	0	ID=GCA000153685_03782;Name=N-acetylmuramoyl-L-alanine amidase domain-containing protein;locus_tag=GCA000153685_03782;product=N-acetylmuramoyl-L-alanine amidase domain-containing protein;Parent=GCA000153685_03782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419504.1,SO:0001217,UniParc:UPI00000D1026,UniRef:UniRef100_I6Y3Z2,UniRef:UniRef50_A0A7V8LJW5,UniRef:UniRef90_I6Y3Z2
contig_1	Pyrodigal	gene	4033556	4034875	.	-	.	ID=GCA000153685_03783_gene;locus_tag=GCA000153685_03783
contig_1	Pyrodigal	CDS	4033556	4034875	.	-	0	ID=GCA000153685_03783;Name=PE-PGRS family protein PE_PGRS59;locus_tag=GCA000153685_03783;product=PE-PGRS family protein PE_PGRS59;Parent=GCA000153685_03783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003911027.1,SO:0001217,UniParc:UPI00000C157D,UniRef:UniRef100_Q6MWV6,UniRef:UniRef50_Q6MWV6,UniRef:UniRef90_Q6MWV6
contig_1	Pyrodigal	gene	4034983	4037529	.	-	.	ID=GCA000153685_03784_gene;locus_tag=GCA000153685_03784;gene=clpC
contig_1	Pyrodigal	CDS	4034983	4037529	.	-	0	ID=GCA000153685_03784;Name=ATP-dependent protease ATP-binding subunit ClpC;locus_tag=GCA000153685_03784;product=ATP-dependent protease ATP-binding subunit ClpC;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0009274,GO:0016887,GO:0042803,GO:0044183;gene=clpC;Parent=GCA000153685_03784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419511,RefSeq:WP_003419511.1,SO:0001217,UniParc:UPI0000127B1F,UniRef:UniRef100_P9WPC9,UniRef:UniRef50_P9WPC9,UniRef:UniRef90_P9WPC9
contig_1	Pyrodigal	gene	4037806	4038144	.	-	.	ID=GCA000153685_03785_gene;locus_tag=GCA000153685_03785;gene=lsr2
contig_1	Pyrodigal	CDS	4037806	4038144	.	-	0	ID=GCA000153685_03785;Name=iron-regulated nucleoid-associated protein Lsr2;locus_tag=GCA000153685_03785;product=iron-regulated nucleoid-associated protein Lsr2;Dbxref=GO:0003677,GO:0005829,GO:0005886,GO:0006355,GO:0009274,GO:0009295,GO:0010039,GO:0016746,GO:0042262,GO:0042542,GO:0071453;gene=lsr2;Parent=GCA000153685_03785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419513,KEGG:K26249,RefSeq:WP_003419513.1,SO:0001217,UniParc:UPI000012E989,UniRef:UniRef100_P9WIP7,UniRef:UniRef50_P9WIP7,UniRef:UniRef90_P9WIP7
contig_1	Pyrodigal	gene	4038248	4039765	.	-	.	ID=GCA000153685_03786_gene;locus_tag=GCA000153685_03786;gene=lysS
contig_1	Pyrodigal	CDS	4038248	4039765	.	-	0	ID=GCA000153685_03786;Name=lysine--tRNA ligase;locus_tag=GCA000153685_03786;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430;gene=lysS;Parent=GCA000153685_03786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419514.1,SO:0001217,UniParc:UPI000013650B,UniRef:UniRef100_P9WFU9,UniRef:UniRef50_P9WFU9,UniRef:UniRef90_P9WFU9;ec_number=6.1.1.6
contig_1	Pyrodigal	gene	4039866	4040684	.	-	.	ID=GCA000153685_03787_gene;locus_tag=GCA000153685_03787;gene=coaX
contig_1	Pyrodigal	CDS	4039866	4040684	.	-	0	ID=GCA000153685_03787;Name=type III pantothenate kinase;locus_tag=GCA000153685_03787;product=type III pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005737,GO:0015937,GO:0046872;gene=coaX;Parent=GCA000153685_03787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1521,COG:H,KEGG:K03525,RefSeq:WP_003419517.1,SO:0001217,UniParc:UPI0000038DDD,UniRef:UniRef100_P9WPA1,UniRef:UniRef50_P9WPA1,UniRef:UniRef90_P9WPA1;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	4040687	4041106	.	-	.	ID=GCA000153685_03788_gene;locus_tag=GCA000153685_03788;gene=panD
contig_1	Pyrodigal	CDS	4040687	4041106	.	-	0	ID=GCA000153685_03788;Name=aspartate 1-decarboxylase;locus_tag=GCA000153685_03788;product=aspartate 1-decarboxylase;Dbxref=GO:0004068,GO:0005829,GO:0006523,GO:0015940;gene=panD;Parent=GCA000153685_03788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01579,RefSeq:WP_003419523.1,SO:0001217,UniParc:UPI00001312C0,UniRef:UniRef100_P9WIL3,UniRef:UniRef50_P9WIL3,UniRef:UniRef90_P9WIL3,VFDB:VFC0272,VFDB:VFG001416;ec_number=4.1.1.11
contig_1	Pyrodigal	gene	4041106	4042035	.	-	.	ID=GCA000153685_03789_gene;locus_tag=GCA000153685_03789;gene=panC
contig_1	Pyrodigal	CDS	4041106	4042035	.	-	0	ID=GCA000153685_03789;Name=pantothenate synthetase;locus_tag=GCA000153685_03789;product=pantothenate synthetase;Dbxref=GO:0000287,GO:0004592,GO:0005524,GO:0005829,GO:0015940,GO:0019482,GO:0030145;gene=panC;Parent=GCA000153685_03789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01918,RefSeq:WP_003419526.1,SO:0001217,UniParc:UPI000013129B,UniRef:UniRef100_P9WIL5,UniRef:UniRef50_P9WIL5,UniRef:UniRef90_P9WIL5,VFDB:VFC0272,VFDB:VFG001417;ec_number=6.3.2.1
contig_1	Pyrodigal	gene	4042032	4042943	.	-	.	ID=GCA000153685_03790_gene;locus_tag=GCA000153685_03790
contig_1	Pyrodigal	CDS	4042032	4042943	.	-	0	ID=GCA000153685_03790;Name=Oxidoreductase;locus_tag=GCA000153685_03790;product=Oxidoreductase;Parent=GCA000153685_03790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419533.1,SO:0001217,UniParc:UPI00000C14CB,UniRef:UniRef100_A0A1R3Y4M9,UniRef:UniRef50_L7KE09,UniRef:UniRef90_R4MBJ0
contig_1	Pyrodigal	gene	4043128	4044321	.	-	.	ID=GCA000153685_03791_gene;locus_tag=GCA000153685_03791
contig_1	Pyrodigal	CDS	4043128	4044321	.	-	0	ID=GCA000153685_03791;Name=DUF6779 domain-containing protein;locus_tag=GCA000153685_03791;product=DUF6779 domain-containing protein;Parent=GCA000153685_03791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899595.1,SO:0001217,UniParc:UPI0000220077,UniRef:UniRef100_A5U8S9,UniRef:UniRef50_A0A1P8X8M6,UniRef:UniRef90_A0A8I0ERZ3
contig_1	Pyrodigal	gene	4044530	4045006	.	-	.	ID=GCA000153685_03792_gene;locus_tag=GCA000153685_03792
contig_1	Pyrodigal	CDS	4044530	4045006	.	-	0	ID=GCA000153685_03792;Name=Secreted protein;locus_tag=GCA000153685_03792;product=Secreted protein;Parent=GCA000153685_03792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419535.1,SO:0001217,UniParc:UPI00000CCAFB,UniRef:UniRef100_A5U8T0,UniRef:UniRef50_G8RS05,UniRef:UniRef90_Q7D575
contig_1	Pyrodigal	gene	4045006	4045572	.	-	.	ID=GCA000153685_03793_gene;locus_tag=GCA000153685_03793;gene=folK
contig_1	Pyrodigal	CDS	4045006	4045572	.	-	0	ID=GCA000153685_03793;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA000153685_03793;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;Dbxref=GO:0003848,GO:0005524,GO:0009396,GO:0016301,GO:0046654,GO:0046656;gene=folK;Parent=GCA000153685_03793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419536.1,SO:0001217,UniParc:UPI000012CB48,UniRef:UniRef100_P9WNC7,UniRef:UniRef50_P9WNC7,UniRef:UniRef90_P9WNC7;ec_number=2.7.6.3
contig_1	Pyrodigal	gene	4045569	4045970	.	-	.	ID=GCA000153685_03794_gene;locus_tag=GCA000153685_03794;gene=folB
contig_1	Pyrodigal	CDS	4045569	4045970	.	-	0	ID=GCA000153685_03794;Name=dihydroneopterin aldolase;locus_tag=GCA000153685_03794;product=dihydroneopterin aldolase;Dbxref=GO:0004150,GO:0005737,GO:0006760,GO:0016491,GO:0016853,GO:0046654,GO:0046656;gene=folB;Parent=GCA000153685_03794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419537.1,SO:0001217,UniParc:UPI000012AB45,UniRef:UniRef100_P9WNC5,UniRef:UniRef50_P9WNC5,UniRef:UniRef90_P9WNC5;ec_number=4.1.2.25
contig_1	Pyrodigal	gene	4045963	4046790	.	-	.	ID=GCA000153685_03795_gene;locus_tag=GCA000153685_03795;gene=folP
contig_1	Pyrodigal	CDS	4045963	4046790	.	-	0	ID=GCA000153685_03795;Name=dihydropteroate synthase;locus_tag=GCA000153685_03795;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0005829,GO:0009396,GO:0046654,GO:0046656,GO:0046872;gene=folP;Parent=GCA000153685_03795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00796,SO:0001217,UniParc:UPI0001E61D66,UniRef:UniRef100_A0A0H3LF79,UniRef:UniRef50_P9WND1,UniRef:UniRef90_P9WND1;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	4046802	4047410	.	-	.	ID=GCA000153685_03796_gene;locus_tag=GCA000153685_03796;gene=folE
contig_1	Pyrodigal	CDS	4046802	4047410	.	-	0	ID=GCA000153685_03796;Name=GTP cyclohydrolase I FolE;locus_tag=GCA000153685_03796;product=GTP cyclohydrolase I FolE;Dbxref=GO:0003934,GO:0005525,GO:0005737,GO:0006729,GO:0006730,GO:0008270,GO:0046654;gene=folE;Parent=GCA000153685_03796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01495,RefSeq:WP_003899597.1,SO:0001217,UniParc:UPI000012B2AB,UniRef:UniRef100_P9WN57,UniRef:UniRef50_Q8NM84,UniRef:UniRef90_P9WN57;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	4047426	4049708	.	-	.	ID=GCA000153685_03797_gene;locus_tag=GCA000153685_03797;gene=ftsH
contig_1	Pyrodigal	CDS	4047426	4049708	.	-	0	ID=GCA000153685_03797;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA000153685_03797;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004176,GO:0004222,GO:0005524,GO:0005829,GO:0005886,GO:0006508,GO:0006979,GO:0008270,GO:0010468,GO:0016020,GO:0016887,GO:0030163,GO:0051301;gene=ftsH;Parent=GCA000153685_03797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419543.1,SO:0001217,UniParc:UPI000012ACD6,UniRef:UniRef100_P9WQN3,UniRef:UniRef50_P9WQN3,UniRef:UniRef90_P9WQN3;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	4050634	4051206	.	-	.	ID=GCA000153685_03798_gene;locus_tag=GCA000153685_03798;gene=espD
contig_1	Pyrodigal	CDS	4050634	4051206	.	-	0	ID=GCA000153685_03798;Name=type VII secretion system ESX-1 target EspD;locus_tag=GCA000153685_03798;product=type VII secretion system ESX-1 target EspD;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0044315;gene=espD;Parent=GCA000153685_03798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419545,SO:0001217,UniParc:UPI00005EE888,UniRef:UniRef100_A0A0E8V9R0,UniRef:UniRef50_P9WJD5,UniRef:UniRef90_P9WJD5
contig_1	Pyrodigal	gene	4051304	4051615	.	-	.	ID=GCA000153685_03799_gene;locus_tag=GCA000153685_03799;gene=espC
contig_1	Pyrodigal	CDS	4051304	4051615	.	-	0	ID=GCA000153685_03799;Name=type VII secretion system ESX-1 filament-forming target EspC;locus_tag=GCA000153685_03799;product=type VII secretion system ESX-1 filament-forming target EspC;Dbxref=GO:0009306;gene=espC;Parent=GCA000153685_03799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899599,KEGG:K27089,RefSeq:WP_003899599.1,SO:0001217,UniParc:UPI000013925F,UniRef:UniRef100_P9WJD7,UniRef:UniRef50_P9WJD7,UniRef:UniRef90_P9WJD7
contig_1	Pyrodigal	gene	4051689	4052867	.	-	.	ID=GCA000153685_03800_gene;locus_tag=GCA000153685_03800;gene=espA
contig_1	Pyrodigal	CDS	4051689	4052867	.	-	0	ID=GCA000153685_03800;Name=type VII secretion system ESX-1 target EspA;locus_tag=GCA000153685_03800;product=type VII secretion system ESX-1 target EspA;Dbxref=GO:0005576,GO:0005615,GO:0005886,GO:0044315,GO:0051701,GO:0071766;gene=espA;Parent=GCA000153685_03800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912265,KEGG:K27098,RefSeq:WP_003419551.1,SO:0001217,UniParc:UPI00001651D0,UniRef:UniRef100_P9WJE0,UniRef:UniRef50_P9WJE1,UniRef:UniRef90_P9WJE1
contig_1	Pyrodigal	gene	4054225	4055193	.	+	.	ID=GCA000153685_03801_gene;locus_tag=GCA000153685_03801;gene=ephA
contig_1	Pyrodigal	CDS	4054225	4055193	.	+	0	ID=GCA000153685_03801;Name=epoxide hydrolase EphA;locus_tag=GCA000153685_03801;product=epoxide hydrolase EphA;Dbxref=GO:0004301,GO:0009636,GO:0016787,GO:0042803;gene=ephA;Parent=GCA000153685_03801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899600,RefSeq:WP_003899600.1,SO:0001217,UniParc:UPI00000D5FBA,UniRef:UniRef100_I6YGS0,UniRef:UniRef50_I6YGS0,UniRef:UniRef90_I6YGS0;ec_number=3.3.2.10
contig_1	Pyrodigal	gene	4055190	4056377	.	+	.	ID=GCA000153685_03802_gene;locus_tag=GCA000153685_03802
contig_1	Pyrodigal	CDS	4055190	4056377	.	+	0	ID=GCA000153685_03802;Name=Putative monooxygenase;locus_tag=GCA000153685_03802;product=Putative monooxygenase;Parent=GCA000153685_03802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14733,RefSeq:WP_003899601.1,SO:0001217,UniParc:UPI00000D5F82,UniRef:UniRef100_I6X7W8,UniRef:UniRef50_A0A931GNF7,UniRef:UniRef90_A0A655AQB8;ec_number=1.14.13.107
contig_1	Pyrodigal	gene	4056476	4056760	.	-	.	ID=GCA000153685_03803_gene;locus_tag=GCA000153685_03803;gene=esxL
contig_1	Pyrodigal	CDS	4056476	4056760	.	-	0	ID=GCA000153685_03803;Name=type VII secretion system ESX-5 protein EsxL;locus_tag=GCA000153685_03803;product=type VII secretion system ESX-5 protein EsxL;Dbxref=GO:0005576,GO:0009274;gene=esxL;Parent=GCA000153685_03803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003898766,RefSeq:WP_003900722.1,SO:0001217,UniParc:UPI00001651D1,UniRef:UniRef100_P0DOA8,UniRef:UniRef50_P9WNI7,UniRef:UniRef90_P0DOA6
contig_1	Pyrodigal	gene	4056787	4057083	.	-	.	ID=GCA000153685_03804_gene;locus_tag=GCA000153685_03804;gene=esxW
contig_1	Pyrodigal	CDS	4056787	4057083	.	-	0	ID=GCA000153685_03804;Name=type VII secretion system protein EsxW;locus_tag=GCA000153685_03804;product=type VII secretion system protein EsxW;Dbxref=GO:0005576;gene=esxW;Parent=GCA000153685_03804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899603,RefSeq:WP_003899603.1,SO:0001217,UniParc:UPI000012A19C,UniRef:UniRef100_P9WNI3,UniRef:UniRef50_P9WNI3,UniRef:UniRef90_P9WNI3
contig_1	Pyrodigal	gene	4057140	4058381	.	-	.	ID=GCA000153685_03805_gene;locus_tag=GCA000153685_03805;gene=pPE65
contig_1	Pyrodigal	CDS	4057140	4058381	.	-	0	ID=GCA000153685_03805;Name=putative PPE family protein PPE65;locus_tag=GCA000153685_03805;product=putative PPE family protein PPE65;Dbxref=GO:0035435,GO:0052572;gene=pPE65;Parent=GCA000153685_03805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900723.1,SO:0001217,UniParc:UPI00000D600F,UniRef:UniRef100_P9WHX3,UniRef:UniRef50_P9WHX3,UniRef:UniRef90_P9WHX3
contig_1	Pyrodigal	gene	4058391	4058690	.	-	.	ID=GCA000153685_03806_gene;locus_tag=GCA000153685_03806
contig_1	Pyrodigal	CDS	4058391	4058690	.	-	0	ID=GCA000153685_03806;Name=PE domain-containing protein;locus_tag=GCA000153685_03806;product=PE domain-containing protein;Parent=GCA000153685_03806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899605.1,SO:0001217,UniParc:UPI00000D5FD5,UniRef:UniRef100_I6YGS7,UniRef:UniRef50_A0A051U7L6,UniRef:UniRef90_R4M7N7
contig_1	Pyrodigal	gene	4058905	4059741	.	+	.	ID=GCA000153685_03807_gene;locus_tag=GCA000153685_03807;gene=lpqG
contig_1	Pyrodigal	CDS	4058905	4059741	.	+	0	ID=GCA000153685_03807;Name=Lipoprotein LpqG;locus_tag=GCA000153685_03807;product=Lipoprotein LpqG;gene=lpqG;Parent=GCA000153685_03807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09807,SO:0001217,UniParc:UPI0001DD02F4,UniRef:UniRef100_A5U8U7,UniRef:UniRef50_A0A1A2LYA8,UniRef:UniRef90_R4M0J9
contig_1	Pyrodigal	gene	4059746	4060354	.	-	.	ID=GCA000153685_03808_gene;locus_tag=GCA000153685_03808;gene=hpt
contig_1	Pyrodigal	CDS	4059746	4060354	.	-	0	ID=GCA000153685_03808;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA000153685_03808;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0000166,GO:0000287,GO:0004422,GO:0005829,GO:0006166,GO:0006177,GO:0006178,GO:0006188,GO:0032263,GO:0032264,GO:0043101,GO:0046100,GO:0052657;gene=hpt;Parent=GCA000153685_03808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00760,SO:0001217,UniParc:UPI00001651D2,UniRef:UniRef100_P9WHQ8,UniRef:UniRef50_P9WHQ9,UniRef:UniRef90_P9WHQ9;ec_number=2.4.2.8
contig_1	Pyrodigal	gene	4060393	4061364	.	-	.	ID=GCA000153685_03809_gene;locus_tag=GCA000153685_03809;gene=tilS
contig_1	Pyrodigal	CDS	4060393	4061364	.	-	0	ID=GCA000153685_03809;Name=tRNA(Ile)-lysidine synthase;locus_tag=GCA000153685_03809;product=tRNA(Ile)-lysidine synthase;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0032267;gene=tilS;Parent=GCA000153685_03809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04075,RefSeq:WP_003899608.1,SO:0001217,UniParc:UPI0000139262,UniRef:UniRef100_P9WG53,UniRef:UniRef50_P9WG53,UniRef:UniRef90_P9WG53;ec_number=6.3.4.19
contig_1	Pyrodigal	gene	4061343	4062416	.	-	.	ID=GCA000153685_03810_gene;locus_tag=GCA000153685_03810
contig_1	Pyrodigal	CDS	4061343	4062416	.	-	0	ID=GCA000153685_03810;Name=Hydrolase;locus_tag=GCA000153685_03810;product=Hydrolase;Parent=GCA000153685_03810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCB0B,UniRef:UniRef100_Q7D566,UniRef:UniRef50_D0L4G6,UniRef:UniRef90_O06381
contig_1	Pyrodigal	gene	4062392	4063777	.	-	.	ID=GCA000153685_03811_gene;locus_tag=GCA000153685_03811;gene=dacB
contig_1	Pyrodigal	CDS	4062392	4063777	.	-	0	ID=GCA000153685_03811;Name=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;locus_tag=GCA000153685_03811;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;Dbxref=GO:0000270,GO:0004175,GO:0004185,GO:0005576,GO:0006508,GO:0009002,GO:0009252,GO:0071555;gene=dacB;Parent=GCA000153685_03811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07259,RefSeq:WP_003899610.1,SO:0001217,UniParc:UPI00000D4F3E,UniRef:UniRef100_O06380,UniRef:UniRef50_A0R596,UniRef:UniRef90_O06380;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	4063915	4064403	.	+	.	ID=GCA000153685_03812_gene;locus_tag=GCA000153685_03812;gene=ppa
contig_1	Pyrodigal	CDS	4063915	4064403	.	+	0	ID=GCA000153685_03812;Name=inorganic diphosphatase;locus_tag=GCA000153685_03812;product=inorganic diphosphatase;Dbxref=GO:0000287,GO:0004427,GO:0005576,GO:0005829,GO:0005886,GO:0006796,GO:0044228;gene=ppa;Parent=GCA000153685_03812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419577,COG:C,COG:COG0221,RefSeq:WP_003419577.1,SO:0001217,UniParc:UPI000012D843,UniRef:UniRef100_P9WI55,UniRef:UniRef50_P9WI55,UniRef:UniRef90_P9WI55;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	4064449	4065546	.	-	.	ID=GCA000153685_03813_gene;locus_tag=GCA000153685_03813
contig_1	Pyrodigal	CDS	4064449	4065546	.	-	0	ID=GCA000153685_03813;Name=Conserved integral membrane protein;locus_tag=GCA000153685_03813;product=Conserved integral membrane protein;Parent=GCA000153685_03813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09799,RefSeq:WP_003419580.1,SO:0001217,UniParc:UPI000016536E,UniRef:UniRef100_A5U8V3,UniRef:UniRef50_A0A7K0DE17,UniRef:UniRef90_A5U8V3
contig_1	Pyrodigal	gene	4065688	4066962	.	+	.	ID=GCA000153685_03814_gene;locus_tag=GCA000153685_03814
contig_1	Pyrodigal	CDS	4065688	4066962	.	+	0	ID=GCA000153685_03814;Name=putative protein Rv3630;locus_tag=GCA000153685_03814;product=putative protein Rv3630;Dbxref=GO:0005576,GO:0005886;Parent=GCA000153685_03814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021787D2,UniRef:UniRef100_A0A0H3LFA5,UniRef:UniRef50_P9WKX9,UniRef:UniRef90_P9WKX9
contig_1	Pyrodigal	gene	4067006	4067731	.	+	.	ID=GCA000153685_03815_gene;locus_tag=GCA000153685_03815
contig_1	Pyrodigal	CDS	4067006	4067731	.	+	0	ID=GCA000153685_03815;Name=putative transferase (Possibly glycosyltransferase);locus_tag=GCA000153685_03815;product=putative transferase (Possibly glycosyltransferase);Parent=GCA000153685_03815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22907,RefSeq:WP_003419585.1,SO:0001217,UniParc:UPI00000D4F3C,UniRef:UniRef100_O06376,UniRef:UniRef50_O06376,UniRef:UniRef90_O06376
contig_1	Pyrodigal	gene	4067728	4068072	.	+	.	ID=GCA000153685_03816_gene;locus_tag=GCA000153685_03816
contig_1	Pyrodigal	CDS	4067728	4068072	.	+	0	ID=GCA000153685_03816;Name=DUF2304 domain-containing protein;locus_tag=GCA000153685_03816;product=DUF2304 domain-containing protein;Parent=GCA000153685_03816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419590.1,SO:0001217,UniParc:UPI00000D100D,UniRef:UniRef100_I6YGT7,UniRef:UniRef50_F5YSB9,UniRef:UniRef90_A0A1A0MGG3
contig_1	Pyrodigal	gene	4068283	4069158	.	+	.	ID=GCA000153685_03817_gene;locus_tag=GCA000153685_03817
contig_1	Pyrodigal	CDS	4068283	4069158	.	+	0	ID=GCA000153685_03817;Name=putative protein Rv3633;locus_tag=GCA000153685_03817;product=putative protein Rv3633;Dbxref=GO:0005506,GO:0005886,GO:0016706;Parent=GCA000153685_03817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419601.1,SO:0001217,UniParc:UPI0000139265,UniRef:UniRef100_P9WI89,UniRef:UniRef50_P9WI89,UniRef:UniRef90_P9WI89
contig_1	Pyrodigal	gene	4069159	4070127	.	-	.	ID=GCA000153685_03818_gene;locus_tag=GCA000153685_03818;gene=galE1
contig_1	Pyrodigal	CDS	4069159	4070127	.	-	0	ID=GCA000153685_03818;Name=UDP-glucose 4-epimerase;locus_tag=GCA000153685_03818;product=UDP-glucose 4-epimerase;gene=galE1;Parent=GCA000153685_03818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419610,BlastRules:WP_029104180,COG:COG0451,COG:M,SO:0001217,UniParc:UPI00000D4F3B,UniRef:UniRef100_A0A0E8W1J2,UniRef:UniRef50_A0R5C5,UniRef:UniRef90_A0A0E8W1J2
contig_1	Pyrodigal	gene	4070141	4071901	.	+	.	ID=GCA000153685_03819_gene;locus_tag=GCA000153685_03819
contig_1	Pyrodigal	CDS	4070141	4071901	.	+	0	ID=GCA000153685_03819;Name=Transmembrane protein;locus_tag=GCA000153685_03819;product=Transmembrane protein;Parent=GCA000153685_03819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE88C,UniRef:UniRef100_A5U8V9,UniRef:UniRef50_A0A9X3BQW3,UniRef:UniRef90_A5U8V9
contig_1	Pyrodigal	gene	4072244	4072591	.	+	.	ID=GCA000153685_03820_gene;locus_tag=GCA000153685_03820
contig_1	Pyrodigal	CDS	4072244	4072591	.	+	0	ID=GCA000153685_03820;Name=Insertion sequence element transposase;locus_tag=GCA000153685_03820;product=Insertion sequence element transposase;Parent=GCA000153685_03820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000C1500,UniRef:UniRef100_O06371,UniRef:UniRef50_A0A2I7WD53,UniRef:UniRef90_A0A2I7WD53
contig_1	Pyrodigal	gene	4073111	4073476	.	+	.	ID=GCA000153685_03821_gene;locus_tag=GCA000153685_03821;gene=istA
contig_1	Pyrodigal	CDS	4073111	4073476	.	+	0	ID=GCA000153685_03821;Name=IS21 family transposase;locus_tag=GCA000153685_03821;product=IS21 family transposase;Dbxref=GO:0004803;gene=istA;Parent=GCA000153685_03821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002178766,UniRef:UniRef100_A0A0H3LGD5,UniRef:UniRef50_A0A8E2IUN5,UniRef:UniRef90_A0A318H500
contig_1	Pyrodigal	gene	4073476	4074222	.	+	.	ID=GCA000153685_03822_gene;locus_tag=GCA000153685_03822;gene=istB
contig_1	Pyrodigal	CDS	4073476	4074222	.	+	0	ID=GCA000153685_03822;Name=IS21-like element helper ATPase IstB;locus_tag=GCA000153685_03822;product=IS21-like element helper ATPase IstB;Dbxref=GO:0005524;gene=istB;Parent=GCA000153685_03822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899614.1,SO:0001217,UniParc:UPI00000D601C,UniRef:UniRef100_I6XHU7,UniRef:UniRef50_A0A0C2AV65,UniRef:UniRef90_A0A0U1DQ57
contig_1	Pyrodigal	gene	4075012	4076241	.	-	.	ID=GCA000153685_03823_gene;locus_tag=GCA000153685_03823;gene=tnp
contig_1	Pyrodigal	CDS	4075012	4076241	.	-	0	ID=GCA000153685_03823;Name=IS256 family IS1553 transposase;locus_tag=GCA000153685_03823;product=IS256 family IS1553 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_03823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1553,RefSeq:WP_003899615.1,SO:0001217,UniParc:UPI00000D4F3A,UniRef:UniRef100_O06367,UniRef:UniRef50_K4QSD5,UniRef:UniRef90_O06367
contig_1	Pyrodigal	gene	4076417	4077052	.	-	.	ID=GCA000153685_03824_gene;locus_tag=GCA000153685_03824
contig_1	Pyrodigal	CDS	4076417	4077052	.	-	0	ID=GCA000153685_03824;Name=protein adenylyltransferase;locus_tag=GCA000153685_03824;product=protein adenylyltransferase;Parent=GCA000153685_03824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899616.1,SO:0001217,UniParc:UPI00000D5FFF,UniRef:UniRef100_I6YCN3,UniRef:UniRef50_A1UQ28,UniRef:UniRef90_I6YCN3
contig_1	Pyrodigal	gene	4077063	4077257	.	-	.	ID=GCA000153685_03825_gene;locus_tag=GCA000153685_03825;gene=vbhA
contig_1	Pyrodigal	CDS	4077063	4077257	.	-	0	ID=GCA000153685_03825;Name=Antitoxin VbhA domain-containing protein;locus_tag=GCA000153685_03825;product=Antitoxin VbhA domain-containing protein;gene=vbhA;Parent=GCA000153685_03825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419627.1,SO:0001217,UniParc:UPI00000D1098,UniRef:UniRef100_I6Y464,UniRef:UniRef50_I6Y464,UniRef:UniRef90_I6Y464
contig_1	Pyrodigal	gene	4077652	4077843	.	+	.	ID=GCA000153685_03826_gene;locus_tag=GCA000153685_03826
contig_1	Pyrodigal	CDS	4077652	4077843	.	+	0	ID=GCA000153685_03826;Name=Integrase;locus_tag=GCA000153685_03826;product=Integrase;Parent=GCA000153685_03826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419633.1,SO:0001217,UniParc:UPI00000C14FF,UniRef:UniRef100_O06364,UniRef:UniRef50_O06364,UniRef:UniRef90_O06364
contig_1	tRNAscan-SE	gene	4077854	4077929	.	-	.	ID=GCA000153685_03827_gene;locus_tag=GCA000153685_03827;gene=trnT
contig_1	tRNAscan-SE	tRNA	4077854	4077929	.	-	.	ID=GCA000153685_03827;Name=tRNA-Thr(cgt);locus_tag=GCA000153685_03827;product=tRNA-Thr(cgt);gene=trnT;anti_codon=cgt;amino_acid=Thr;Parent=GCA000153685_03827_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	Pyrodigal	gene	4078008	4079216	.	-	.	ID=GCA000153685_03828_gene;locus_tag=GCA000153685_03828
contig_1	Pyrodigal	CDS	4078008	4079216	.	-	0	ID=GCA000153685_03828;Name=DNA polymerase III subunit delta';locus_tag=GCA000153685_03828;product=DNA polymerase III subunit delta';Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0008408,GO:0009360;Parent=GCA000153685_03828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE890,UniRef:UniRef100_O06363,UniRef:UniRef50_A0A853M3Y8,UniRef:UniRef90_O06363;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	4079299	4080948	.	+	.	ID=GCA000153685_03829_gene;locus_tag=GCA000153685_03829
contig_1	Pyrodigal	CDS	4079299	4080948	.	+	0	ID=GCA000153685_03829;Name=Transmembrane protein;locus_tag=GCA000153685_03829;product=Transmembrane protein;Parent=GCA000153685_03829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419638.1,SO:0001217,UniParc:UPI00000D5E6F,UniRef:UniRef100_A5U8W9,UniRef:UniRef50_R4MCH1,UniRef:UniRef90_A0A655ID83
contig_1	Pyrodigal	gene	4080945	4083932	.	-	.	ID=GCA000153685_03830_gene;locus_tag=GCA000153685_03830;gene=topA
contig_1	Pyrodigal	CDS	4080945	4083932	.	-	0	ID=GCA000153685_03830;Name=type I DNA topoisomerase;locus_tag=GCA000153685_03830;product=type I DNA topoisomerase;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0005737,GO:0005829,GO:0005886,GO:0006260,GO:0006265,GO:0008428,GO:0009274;gene=topA;Parent=GCA000153685_03830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03168,SO:0001217,UniParc:UPI0004E31224,UniRef:UniRef100_A0A0E8VY41,UniRef:UniRef50_P9WG49,UniRef:UniRef90_P9WG49;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	4084102	4084680	.	-	.	ID=GCA000153685_03831_gene;locus_tag=GCA000153685_03831
contig_1	Pyrodigal	CDS	4084102	4084680	.	-	0	ID=GCA000153685_03831;Name=hypothetical protein;locus_tag=GCA000153685_03831;product=hypothetical protein;Parent=GCA000153685_03831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419642.1,SO:0001217,UniParc:UPI00000D0FDF,UniRef:UniRef100_I6Y469,UniRef:UniRef50_I6Y469,UniRef:UniRef90_I6Y469
contig_1	Pyrodigal	gene	4084820	4085023	.	-	.	ID=GCA000153685_03832_gene;locus_tag=GCA000153685_03832;gene=cspA
contig_1	Pyrodigal	CDS	4084820	4085023	.	-	0	ID=GCA000153685_03832;Name=cold shock protein CspA;locus_tag=GCA000153685_03832;product=cold shock protein CspA;Dbxref=GO:0003676,GO:0003677,GO:0005737,GO:0009274,GO:0010468;gene=cspA;Parent=GCA000153685_03832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419650,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_003419650.1,SO:0001217,UniParc:UPI000012856D,UniRef:UniRef100_P9WP75,UniRef:UniRef50_P9WP75,UniRef:UniRef90_P9WP75
contig_1	Pyrodigal	gene	4085273	4087588	.	+	.	ID=GCA000153685_03833_gene;locus_tag=GCA000153685_03833
contig_1	Pyrodigal	CDS	4085273	4087588	.	+	0	ID=GCA000153685_03833;Name=Helicase;locus_tag=GCA000153685_03833;product=Helicase;Parent=GCA000153685_03833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06877,RefSeq:WP_003899618.1,SO:0001217,UniParc:UPI00000D4F38,UniRef:UniRef100_A5U8X3,UniRef:UniRef50_A0A655J4D6,UniRef:UniRef90_A0A655J4D6
contig_1	Pyrodigal	gene	4087725	4088009	.	+	.	ID=GCA000153685_03834_gene;locus_tag=GCA000153685_03834
contig_1	Pyrodigal	CDS	4087725	4088009	.	+	0	ID=GCA000153685_03834;Name=PE family protein PE33;locus_tag=GCA000153685_03834;product=PE family protein PE33;Parent=GCA000153685_03834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419654.1,SO:0001217,UniParc:UPI00000D5FC6,UniRef:UniRef100_I6X7Z8,UniRef:UniRef50_I6X7Z8,UniRef:UniRef90_I6X7Z8
contig_1	Pyrodigal	gene	4088333	4089370	.	+	.	ID=GCA000153685_03835_gene;locus_tag=GCA000153685_03835
contig_1	Pyrodigal	CDS	4088333	4089370	.	+	0	ID=GCA000153685_03835;Name=Rv3651-like N-terminal domain-containing protein;locus_tag=GCA000153685_03835;product=Rv3651-like N-terminal domain-containing protein;Parent=GCA000153685_03835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419657.1,SO:0001217,UniParc:UPI00000D10A6,UniRef:UniRef100_I6YCP0,UniRef:UniRef50_I4BQ96,UniRef:UniRef90_I6YCP0
contig_1	Pyrodigal	gene	4090291	4091082	.	+	.	ID=GCA000153685_03836_gene;locus_tag=GCA000153685_03836
contig_1	Pyrodigal	CDS	4090291	4091082	.	+	0	ID=GCA000153685_03836;Name=PE family protein;locus_tag=GCA000153685_03836;product=PE family protein;Parent=GCA000153685_03836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00097B7329,UniRef:UniRef100_A0AA44LSS0,UniRef:UniRef50_A0AA44LSS0,UniRef:UniRef90_A0AA44LSS0
contig_1	Pyrodigal	gene	4091215	4091523	.	-	.	ID=GCA000153685_03837_gene;locus_tag=GCA000153685_03837
contig_1	Pyrodigal	CDS	4091215	4091523	.	-	0	ID=GCA000153685_03837;Name=Flp pilus-assembly TadE/G-like family protein;locus_tag=GCA000153685_03837;product=Flp pilus-assembly TadE/G-like family protein;Parent=GCA000153685_03837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012054375.1,SO:0001217,UniParc:UPI00015456FA,UniRef:UniRef100_A0AAX1PQ22,UniRef:UniRef50_M3VFT2,UniRef:UniRef90_A0A8I0ER22
contig_1	Pyrodigal	gene	4091555	4091854	.	-	.	ID=GCA000153685_03838_gene;locus_tag=GCA000153685_03838
contig_1	Pyrodigal	CDS	4091555	4091854	.	-	0	ID=GCA000153685_03838;Name=Apoptosis inhibitor Rv3655c;locus_tag=GCA000153685_03838;product=Apoptosis inhibitor Rv3655c;Dbxref=GO:0005576,GO:0005829,GO:0030430,GO:0033668;Parent=GCA000153685_03838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419671.1,SO:0001217,UniParc:UPI00000D2DB6,UniRef:UniRef100_O69623,UniRef:UniRef50_O69623,UniRef:UniRef90_O69623
contig_1	Pyrodigal	gene	4091878	4092084	.	-	.	ID=GCA000153685_03839_gene;locus_tag=GCA000153685_03839
contig_1	Pyrodigal	CDS	4091878	4092084	.	-	0	ID=GCA000153685_03839;Name=DUF4244 domain-containing protein;locus_tag=GCA000153685_03839;product=DUF4244 domain-containing protein;Parent=GCA000153685_03839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419673.1,SO:0001217,UniParc:UPI00000C1568,UniRef:UniRef100_O69624,UniRef:UniRef50_O69624,UniRef:UniRef90_O69624
contig_1	Pyrodigal	gene	4092094	4092681	.	-	.	ID=GCA000153685_03840_gene;locus_tag=GCA000153685_03840;gene=gspF
contig_1	Pyrodigal	CDS	4092094	4092681	.	-	0	ID=GCA000153685_03840;Name=Type II secretion system protein GspF domain-containing protein;locus_tag=GCA000153685_03840;product=Type II secretion system protein GspF domain-containing protein;gene=gspF;Parent=GCA000153685_03840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0003AB4A81,UniRef:UniRef100_A0A0E9A7R5,UniRef:UniRef50_A0A7I7Z1I5,UniRef:UniRef90_A0A0H3LGF2
contig_1	Pyrodigal	gene	4092693	4093493	.	-	.	ID=GCA000153685_03841_gene;locus_tag=GCA000153685_03841
contig_1	Pyrodigal	CDS	4092693	4093493	.	-	0	ID=GCA000153685_03841;Name=Conserved transmembrane protein;locus_tag=GCA000153685_03841;product=Conserved transmembrane protein;Parent=GCA000153685_03841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419679.1,SO:0001217,UniParc:UPI00000D5EE7,UniRef:UniRef100_A5U8Y1,UniRef:UniRef50_A0A1A1ZAZ2,UniRef:UniRef90_A5U8Y1
contig_1	Pyrodigal	gene	4093490	4094653	.	-	.	ID=GCA000153685_03842_gene;locus_tag=GCA000153685_03842
contig_1	Pyrodigal	CDS	4093490	4094653	.	-	0	ID=GCA000153685_03842;Name=Putative conjugal transfer protein Rv3659c;locus_tag=GCA000153685_03842;product=Putative conjugal transfer protein Rv3659c;Dbxref=GO:0005524,GO:0005737,GO:0016887;Parent=GCA000153685_03842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02283,RefSeq:WP_003899624.1,SO:0001217,UniParc:UPI00005EE897,UniRef:UniRef100_P9WMT3,UniRef:UniRef50_P9WMT3,UniRef:UniRef90_P9WMT3;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	4094650	4095723	.	-	.	ID=GCA000153685_03843_gene;locus_tag=GCA000153685_03843;gene=ssd
contig_1	Pyrodigal	CDS	4094650	4095723	.	-	0	ID=GCA000153685_03843;Name=septum site-determining protein Ssd;locus_tag=GCA000153685_03843;product=septum site-determining protein Ssd;Dbxref=GO:0005524,GO:0005829,GO:0009898,GO:0016887;gene=ssd;Parent=GCA000153685_03843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900732,SO:0001217,UniParc:UPI00005EE898,UniRef:UniRef100_P9WKX7,UniRef:UniRef50_P9WKX7,UniRef:UniRef90_P9WKX7
contig_1	Infernal	regulatory_region	4095939	4096014	2.7e-10	-	.	ID=FNJOPAJJMO_79;Name=6C RNA;product=6C RNA;Dbxref=RFAM:RF01066;inference=profile:Rfam:RF01066;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	4096201	4097064	.	+	.	ID=GCA000153685_03844_gene;locus_tag=GCA000153685_03844
contig_1	Pyrodigal	CDS	4096201	4097064	.	+	0	ID=GCA000153685_03844;Name=putative phosphatase Rv3661;locus_tag=GCA000153685_03844;product=putative phosphatase Rv3661;Dbxref=GO:0005829,GO:0005886,GO:0016787,GO:0046872;Parent=GCA000153685_03844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419689.1,SO:0001217,UniParc:UPI0000139267,UniRef:UniRef100_P9WGJ0,UniRef:UniRef50_P9WGJ0,UniRef:UniRef90_P9WGJ0;ec_number=3.1.3.-
contig_1	Infernal	gene	4097238	4097539	.	+	.	ID=GCA000153685_03845_gene;locus_tag=GCA000153685_03845;gene=Ms1
contig_1	Infernal	ncRNA	4097238	4097539	1.3e-29	+	.	ID=GCA000153685_03845;Name=Mycobacterium smegmatis small RNA 1;locus_tag=GCA000153685_03845;product=Mycobacterium smegmatis small RNA 1;Dbxref=RFAM:RF02566;Parent=GCA000153685_03845_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02566
contig_1	Pyrodigal	gene	4097819	4098589	.	-	.	ID=GCA000153685_03846_gene;locus_tag=GCA000153685_03846
contig_1	Pyrodigal	CDS	4097819	4098589	.	-	0	ID=GCA000153685_03846;Name=Fido domain-containing protein;locus_tag=GCA000153685_03846;product=Fido domain-containing protein;Parent=GCA000153685_03846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899626.1,SO:0001217,UniParc:UPI00000D100A,UniRef:UniRef100_I6YCP7,UniRef:UniRef50_H0R196,UniRef:UniRef90_I6YCP7
contig_1	Pyrodigal	gene	4098586	4100241	.	-	.	ID=GCA000153685_03847_gene;locus_tag=GCA000153685_03847;gene=nikD
contig_1	Pyrodigal	CDS	4098586	4100241	.	-	0	ID=GCA000153685_03847;Name=nickel import ATP-binding protein NikD;locus_tag=GCA000153685_03847;product=nickel import ATP-binding protein NikD;Dbxref=GO:0005886,GO:0015413,GO:0015675,GO:0016151,GO:0043190;gene=nikD;Parent=GCA000153685_03847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE899,UniRef:UniRef100_A5U8Y6,UniRef:UniRef50_C7MBI3,UniRef:UniRef90_A5U8Y6;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	4100229	4101092	.	-	.	ID=GCA000153685_03848_gene;locus_tag=GCA000153685_03848;gene=dppC
contig_1	Pyrodigal	CDS	4100229	4101092	.	-	0	ID=GCA000153685_03848;Name=Dipeptide-transport integral membrane protein ABC transporter dppC;locus_tag=GCA000153685_03848;product=Dipeptide-transport integral membrane protein ABC transporter dppC;gene=dppC;Parent=GCA000153685_03848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899628.1,SO:0001217,UniParc:UPI00005EE89A,UniRef:UniRef100_A0A045KDY7,UniRef:UniRef50_C7NHD4,UniRef:UniRef90_A0A045KDY7
contig_1	Pyrodigal	gene	4101085	4102011	.	-	.	ID=GCA000153685_03849_gene;locus_tag=GCA000153685_03849;gene=dppB
contig_1	Pyrodigal	CDS	4101085	4102011	.	-	0	ID=GCA000153685_03849;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000153685_03849;product=ABC transmembrane type-1 domain-containing protein;gene=dppB;Parent=GCA000153685_03849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_003419701.1,SO:0001217,UniParc:UPI00000D5F08,UniRef:UniRef100_A5U8Y8,UniRef:UniRef50_J4TI04,UniRef:UniRef90_J4TI04
contig_1	Pyrodigal	gene	4102013	4103638	.	-	.	ID=GCA000153685_03850_gene;locus_tag=GCA000153685_03850
contig_1	Pyrodigal	CDS	4102013	4103638	.	-	0	ID=GCA000153685_03850;Name=Peptide ABC transporter permease protein;locus_tag=GCA000153685_03850;product=Peptide ABC transporter permease protein;Parent=GCA000153685_03850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899629.1,SO:0001217,UniParc:UPI00000D5FA7,UniRef:UniRef100_A5U8Y9,UniRef:UniRef50_J4JVH7,UniRef:UniRef90_A5U8Y9
contig_1	Pyrodigal	gene	4104346	4106301	.	+	.	ID=GCA000153685_03851_gene;locus_tag=GCA000153685_03851;gene=acs
contig_1	Pyrodigal	CDS	4104346	4106301	.	+	0	ID=GCA000153685_03851;Name=acetate--CoA ligase;locus_tag=GCA000153685_03851;product=acetate--CoA ligase;Dbxref=GO:0003987,GO:0005524,GO:0005829,GO:0005886,GO:0006085,GO:0009274,GO:0016208,GO:0019427,GO:0046872;gene=acs;Parent=GCA000153685_03851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899631.1,SO:0001217,UniParc:UPI00001253B5,UniRef:UniRef100_P9WQD1,UniRef:UniRef50_P9WQD1,UniRef:UniRef90_P9WQD1;ec_number=6.2.1.1
contig_1	Pyrodigal	gene	4106337	4107035	.	-	.	ID=GCA000153685_03852_gene;locus_tag=GCA000153685_03852
contig_1	Pyrodigal	CDS	4106337	4107035	.	-	0	ID=GCA000153685_03852;Name=putative protease;locus_tag=GCA000153685_03852;product=putative protease;Parent=GCA000153685_03852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419708.1,SO:0001217,UniParc:UPI00000D5FFD,UniRef:UniRef100_I6YGW2,UniRef:UniRef50_E6TIK7,UniRef:UniRef90_I6YGW2
contig_1	Pyrodigal	gene	4107381	4107899	.	+	.	ID=GCA000153685_03853_gene;locus_tag=GCA000153685_03853
contig_1	Pyrodigal	CDS	4107381	4107899	.	+	0	ID=GCA000153685_03853;Name=Conserved transmembrane protein;locus_tag=GCA000153685_03853;product=Conserved transmembrane protein;Parent=GCA000153685_03853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419710.1,SO:0001217,UniParc:UPI00000C156A,UniRef:UniRef100_A5U8Z3,UniRef:UniRef50_A0A1A3BJF8,UniRef:UniRef90_A5U8Z3
contig_1	Pyrodigal	gene	4107921	4108883	.	+	.	ID=GCA000153685_03854_gene;locus_tag=GCA000153685_03854
contig_1	Pyrodigal	CDS	4107921	4108883	.	+	0	ID=GCA000153685_03854;Name=Epoxide hydrolase;locus_tag=GCA000153685_03854;product=Epoxide hydrolase;Parent=GCA000153685_03854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61E1A,UniRef:UniRef100_I6YCQ4,UniRef:UniRef50_A0A837DET0,UniRef:UniRef90_A0A654T6C1
contig_1	Pyrodigal	gene	4108876	4110078	.	-	.	ID=GCA000153685_03855_gene;locus_tag=GCA000153685_03855;gene=marP
contig_1	Pyrodigal	CDS	4108876	4110078	.	-	0	ID=GCA000153685_03855;Name=acid resistance serine protease MarP;locus_tag=GCA000153685_03855;product=acid resistance serine protease MarP;Dbxref=GO:0004252,GO:0005576,GO:0005886,GO:0006508,GO:0009274,GO:0009403,GO:0010447,GO:0016020,GO:0042783;gene=marP;Parent=GCA000153685_03855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900734,BlastRules:WP_005101022,BlastRules:WP_011731101,SO:0001217,UniParc:UPI00005EE89B,UniRef:UniRef100_P9WHR9,UniRef:UniRef50_P9WHR9,UniRef:UniRef90_P9WHR9;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	4110075	4110896	.	-	.	ID=GCA000153685_03856_gene;locus_tag=GCA000153685_03856
contig_1	Pyrodigal	CDS	4110075	4110896	.	-	0	ID=GCA000153685_03856;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000153685_03856;product=Nudix hydrolase domain-containing protein;Parent=GCA000153685_03856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419718.1,SO:0001217,UniParc:UPI00000D1051,UniRef:UniRef100_I6XHX8,UniRef:UniRef50_A0A7Z7IS64,UniRef:UniRef90_I6XHX8
contig_1	Pyrodigal	gene	4111028	4111675	.	-	.	ID=GCA000153685_03857_gene;locus_tag=GCA000153685_03857
contig_1	Pyrodigal	CDS	4111028	4111675	.	-	0	ID=GCA000153685_03857;Name=putative membrane-anchored thioredoxin-like protein (Thiol-disulfide interchange related protein);locus_tag=GCA000153685_03857;product=putative membrane-anchored thioredoxin-like protein (Thiol-disulfide interchange related protein);Parent=GCA000153685_03857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912310.1,SO:0001217,UniParc:UPI00005EE89C,UniRef:UniRef100_I6YGW6,UniRef:UniRef50_J4THZ8,UniRef:UniRef90_I6YGW6
contig_1	Pyrodigal	gene	4111711	4112391	.	-	.	ID=GCA000153685_03858_gene;locus_tag=GCA000153685_03858;gene=nth
contig_1	Pyrodigal	CDS	4111711	4112391	.	-	0	ID=GCA000153685_03858;Name=endonuclease III;locus_tag=GCA000153685_03858;product=endonuclease III;Dbxref=GO:0003690,GO:0005886,GO:0006281,GO:0006285,GO:0009274,GO:0019104,GO:0046872,GO:0051539,GO:0140078;gene=nth;Parent=GCA000153685_03858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000165371,UniRef:UniRef100_P9WQ11,UniRef:UniRef50_P9WQ11,UniRef:UniRef90_P9WQ11;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	4112713	4112967	.	+	.	ID=GCA000153685_03859_gene;locus_tag=GCA000153685_03859
contig_1	Pyrodigal	CDS	4112713	4112967	.	+	0	ID=GCA000153685_03859;Name=Membrane protein;locus_tag=GCA000153685_03859;product=Membrane protein;Parent=GCA000153685_03859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E2AEE2,UniRef:UniRef100_A0A0E8U391,UniRef:UniRef50_A0A0E8U391,UniRef:UniRef90_A0A0E8U391
contig_1	Pyrodigal	gene	4113032	4113706	.	+	.	ID=GCA000153685_03860_gene;locus_tag=GCA000153685_03860;gene=crp
contig_1	Pyrodigal	CDS	4113032	4113706	.	+	0	ID=GCA000153685_03860;Name=cAMP-activated global transcriptional regulator CRP;locus_tag=GCA000153685_03860;product=cAMP-activated global transcriptional regulator CRP;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0005886,GO:0006355,GO:0009274,GO:0030552,GO:0045892,GO:0045893;gene=crp;Parent=GCA000153685_03860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419728,RefSeq:WP_003419728.1,SO:0001217,UniParc:UPI00000D5FBC,UniRef:UniRef100_P9WMH3,UniRef:UniRef50_P9WMH3,UniRef:UniRef90_P9WMH3
contig_1	Pyrodigal	gene	4113810	4114604	.	-	.	ID=GCA000153685_03861_gene;locus_tag=GCA000153685_03861
contig_1	Pyrodigal	CDS	4113810	4114604	.	-	0	ID=GCA000153685_03861;Name=Hydrolase;locus_tag=GCA000153685_03861;product=Hydrolase;Parent=GCA000153685_03861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419731.1,SO:0001217,UniParc:UPI00000D6021,UniRef:UniRef100_I6XHY3,UniRef:UniRef50_A0A7J5WXJ8,UniRef:UniRef90_A0A655DG36
contig_1	Pyrodigal	gene	4114611	4115066	.	-	.	ID=GCA000153685_03862_gene;locus_tag=GCA000153685_03862;gene=lysR
contig_1	Pyrodigal	CDS	4114611	4115066	.	-	0	ID=GCA000153685_03862;Name=LysR family transcriptional regulator;locus_tag=GCA000153685_03862;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA000153685_03862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419733.1,SO:0001217,UniParc:UPI00000D1001,UniRef:UniRef100_I6YGW9,UniRef:UniRef50_A0A7I7T7Z8,UniRef:UniRef90_A0A0H3LFE3
contig_1	Pyrodigal	gene	4115082	4115243	.	-	.	ID=GCA000153685_03863_gene;locus_tag=GCA000153685_03863
contig_1	Pyrodigal	CDS	4115082	4115243	.	-	0	ID=GCA000153685_03863;Name=DUF4177 domain-containing protein;locus_tag=GCA000153685_03863;product=DUF4177 domain-containing protein;Parent=GCA000153685_03863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419736.1,SO:0001217,UniParc:UPI00000D2DBE,UniRef:UniRef100_I6X824,UniRef:UniRef50_A0A1R1LJ41,UniRef:UniRef90_I6X824
contig_1	Pyrodigal	gene	4115328	4116350	.	+	.	ID=GCA000153685_03864_gene;locus_tag=GCA000153685_03864
contig_1	Pyrodigal	CDS	4115328	4116350	.	+	0	ID=GCA000153685_03864;Name=Putative ATPase Mb3704;locus_tag=GCA000153685_03864;product=Putative ATPase Mb3704;Dbxref=GO:0005524,GO:0016887;Parent=GCA000153685_03864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01551,RefSeq:WP_003419738.1,SO:0001217,UniParc:UPI000013926D,UniRef:UniRef100_P9WKX5,UniRef:UniRef50_P9WKX5,UniRef:UniRef90_P9WKX5;ec_number=7.3.2.7
contig_1	Pyrodigal	gene	4116347	4117507	.	+	.	ID=GCA000153685_03865_gene;locus_tag=GCA000153685_03865
contig_1	Pyrodigal	CDS	4116347	4117507	.	+	0	ID=GCA000153685_03865;Name=Anion transporter ATPase;locus_tag=GCA000153685_03865;product=Anion transporter ATPase;Parent=GCA000153685_03865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01551,RefSeq:WP_003419740.1,SO:0001217,UniParc:UPI00000D5F93,UniRef:UniRef100_A5U904,UniRef:UniRef50_A0A919RAK5,UniRef:UniRef90_A0A5R1Z7G7;ec_number=7.3.2.7
contig_1	Pyrodigal	gene	4117921	4118223	.	-	.	ID=GCA000153685_03866_gene;locus_tag=GCA000153685_03866;gene=whiB
contig_1	Pyrodigal	CDS	4117921	4118223	.	-	0	ID=GCA000153685_03866;Name=Transcriptional regulator WhiB;locus_tag=GCA000153685_03866;product=Transcriptional regulator WhiB;gene=whiB;Parent=GCA000153685_03866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18955,RefSeq:WP_003912312.1,SO:0001217,UniParc:UPI0000050C2B,UniRef:UniRef100_A0A0H3LFF1,UniRef:UniRef50_A0A7I7QHX2,UniRef:UniRef90_A0A0H3LFF1
contig_1	Pyrodigal	gene	4118639	4121071	.	+	.	ID=GCA000153685_03867_gene;locus_tag=GCA000153685_03867;gene=ponA2
contig_1	Pyrodigal	CDS	4118639	4121071	.	+	0	ID=GCA000153685_03867;Name=transglycosylase/D%2CD-transpeptidase PonA2;locus_tag=GCA000153685_03867;product=transglycosylase/D%2CD-transpeptidase PonA2;gene=ponA2;Parent=GCA000153685_03867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003419746,BlastRules:WP_014878583,COG:COG2815,COG:M,RefSeq:WP_003419746.1,SO:0001217,UniParc:UPI00000D5F1B,UniRef:UniRef100_I6YGX2,UniRef:UniRef50_A0A3S4S2A0,UniRef:UniRef90_A0A975K0R3
contig_1	Pyrodigal	gene	4121140	4122099	.	+	.	ID=GCA000153685_03868_gene;locus_tag=GCA000153685_03868
contig_1	Pyrodigal	CDS	4121140	4122099	.	+	0	ID=GCA000153685_03868;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000153685_03868;product=Calcineurin-like phosphoesterase domain-containing protein;Parent=GCA000153685_03868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07098,RefSeq:WP_003899637.1,SO:0001217,UniParc:UPI00000D0FEE,UniRef:UniRef100_I6X827,UniRef:UniRef50_M0QJM4,UniRef:UniRef90_R4MJX9
contig_1	Pyrodigal	gene	4122096	4123202	.	+	.	ID=GCA000153685_03869_gene;locus_tag=GCA000153685_03869;gene=cds1
contig_1	Pyrodigal	CDS	4122096	4123202	.	+	0	ID=GCA000153685_03869;Name=L-cysteine desulfhydrase Cds1;locus_tag=GCA000153685_03869;product=L-cysteine desulfhydrase Cds1;Dbxref=GO:0005737,GO:0005829,GO:0005886,GO:0016829,GO:0019344,GO:0019450,GO:0030170,GO:0042762,GO:0045454,GO:0070814,GO:1901857;gene=cds1;Parent=GCA000153685_03869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419750.1,SO:0001217,UniParc:UPI00000D4FE9,UniRef:UniRef100_O69652,UniRef:UniRef50_O69652,UniRef:UniRef90_O69652;ec_number=4.4.1.1
contig_1	tRNAscan-SE	gene	4123264	4123337	.	+	.	ID=GCA000153685_03870_gene;locus_tag=GCA000153685_03870;gene=trnP
contig_1	tRNAscan-SE	tRNA	4123264	4123337	.	+	.	ID=GCA000153685_03870;Name=tRNA-Pro(cgg);locus_tag=GCA000153685_03870;product=tRNA-Pro(cgg);gene=trnP;anti_codon=cgg;amino_acid=Pro;Parent=GCA000153685_03870_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	Pyrodigal	gene	4124018	4125448	.	-	.	ID=GCA000153685_03871_gene;locus_tag=GCA000153685_03871;gene=cyp137
contig_1	Pyrodigal	CDS	4124018	4125448	.	-	0	ID=GCA000153685_03871;Name=Putative cytochrome P450 137;locus_tag=GCA000153685_03871;product=Putative cytochrome P450 137;Dbxref=GO:0004497,GO:0005506,GO:0005886,GO:0016491,GO:0016705,GO:0020037;gene=cyp137;Parent=GCA000153685_03871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419754.1,SO:0001217,UniParc:UPI0000126BB5,UniRef:UniRef100_P9WPM5,UniRef:UniRef50_P9WPM5,UniRef:UniRef90_P9WPM5;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	4125474	4125806	.	-	.	ID=GCA000153685_03872_gene;locus_tag=GCA000153685_03872
contig_1	Pyrodigal	CDS	4125474	4125806	.	-	0	ID=GCA000153685_03872;Name=Transmembrane protein;locus_tag=GCA000153685_03872;product=Transmembrane protein;Parent=GCA000153685_03872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003901696.1,SO:0001217,UniParc:UPI0000165373,UniRef:UniRef100_O69654,UniRef:UniRef50_O69654,UniRef:UniRef90_O69654
contig_1	Pyrodigal	gene	4126046	4126414	.	-	.	ID=GCA000153685_03873_gene;locus_tag=GCA000153685_03873;gene=rsfB
contig_1	Pyrodigal	CDS	4126046	4126414	.	-	0	ID=GCA000153685_03873;Name=Anti-sigma-F factor antagonist RsfB;locus_tag=GCA000153685_03873;product=Anti-sigma-F factor antagonist RsfB;Dbxref=GO:0006355,GO:0043856;gene=rsfB;Parent=GCA000153685_03873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419762.1,SO:0001217,UniParc:UPI00000D5EA2,UniRef:UniRef100_P9WGE1,UniRef:UniRef50_P9WGE1,UniRef:UniRef90_P9WGE1
contig_1	Pyrodigal	gene	4126616	4127035	.	-	.	ID=GCA000153685_03874_gene;locus_tag=GCA000153685_03874
contig_1	Pyrodigal	CDS	4126616	4127035	.	-	0	ID=GCA000153685_03874;Name=Glutamyl-tRNA amidotransferase;locus_tag=GCA000153685_03874;product=Glutamyl-tRNA amidotransferase;Parent=GCA000153685_03874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09117,SO:0001217,UniParc:UPI00005EE8A2,UniRef:UniRef100_I6X831,UniRef:UniRef50_A0A853ABL0,UniRef:UniRef90_R4M7V3
contig_1	Pyrodigal	gene	4127203	4128435	.	+	.	ID=GCA000153685_03875_gene;locus_tag=GCA000153685_03875
contig_1	Pyrodigal	CDS	4127203	4128435	.	+	0	ID=GCA000153685_03875;Name=Transmembrane protein;locus_tag=GCA000153685_03875;product=Transmembrane protein;Parent=GCA000153685_03875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B02,UniRef:UniRef100_A5U913,UniRef:UniRef50_G8RQW4,UniRef:UniRef90_A0A8I0ESY0
contig_1	Pyrodigal	gene	4128414	4129115	.	+	.	ID=GCA000153685_03876_gene;locus_tag=GCA000153685_03876
contig_1	Pyrodigal	CDS	4128414	4129115	.	+	0	ID=GCA000153685_03876;Name=Protein-glutamine gamma-glutamyltransferase-like C-terminal domain-containing protein;locus_tag=GCA000153685_03876;product=Protein-glutamine gamma-glutamyltransferase-like C-terminal domain-containing protein;Parent=GCA000153685_03876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CCBAF,UniRef:UniRef100_Q7D522,UniRef:UniRef50_I4BQE4,UniRef:UniRef90_R4MCL2
contig_1	Pyrodigal	gene	4129241	4130242	.	+	.	ID=GCA000153685_03877_gene;locus_tag=GCA000153685_03877
contig_1	Pyrodigal	CDS	4129241	4130242	.	+	0	ID=GCA000153685_03877;Name=putative membrane protein Rv3691;locus_tag=GCA000153685_03877;product=putative membrane protein Rv3691;Dbxref=GO:0005886;Parent=GCA000153685_03877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419772.1,SO:0001217,UniParc:UPI0000165375,UniRef:UniRef100_O69659,UniRef:UniRef50_O69659,UniRef:UniRef90_O69659
contig_1	Pyrodigal	gene	4130239	4131315	.	+	.	ID=GCA000153685_03878_gene;locus_tag=GCA000153685_03878
contig_1	Pyrodigal	CDS	4130239	4131315	.	+	0	ID=GCA000153685_03878;Name=AAA family ATPase;locus_tag=GCA000153685_03878;product=AAA family ATPase;Parent=GCA000153685_03878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419775.1,SO:0001217,UniParc:UPI00000D5F4E,UniRef:UniRef100_A5U916,UniRef:UniRef50_A0A511YSZ1,UniRef:UniRef90_A0A7Z7IRA8
contig_1	Pyrodigal	gene	4131449	4132771	.	+	.	ID=GCA000153685_03879_gene;locus_tag=GCA000153685_03879
contig_1	Pyrodigal	CDS	4131449	4132771	.	+	0	ID=GCA000153685_03879;Name=putative conserved membrane protein;locus_tag=GCA000153685_03879;product=putative conserved membrane protein;Parent=GCA000153685_03879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419776.1,SO:0001217,UniParc:UPI00000C156B,UniRef:UniRef100_O69661,UniRef:UniRef50_A0A8J3PVG9,UniRef:UniRef90_O69661
contig_1	Pyrodigal	gene	4132845	4133837	.	-	.	ID=GCA000153685_03880_gene;locus_tag=GCA000153685_03880
contig_1	Pyrodigal	CDS	4132845	4133837	.	-	0	ID=GCA000153685_03880;Name=Transmembrane protein;locus_tag=GCA000153685_03880;product=Transmembrane protein;Parent=GCA000153685_03880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06384,RefSeq:WP_003419778.1,SO:0001217,UniParc:UPI00000C156C,UniRef:UniRef100_O69662,UniRef:UniRef50_D1AF35,UniRef:UniRef90_Q8VIV4
contig_1	Pyrodigal	gene	4133929	4134861	.	+	.	ID=GCA000153685_03881_gene;locus_tag=GCA000153685_03881
contig_1	Pyrodigal	CDS	4133929	4134861	.	+	0	ID=GCA000153685_03881;Name=RDD domain-containing protein;locus_tag=GCA000153685_03881;product=RDD domain-containing protein;Parent=GCA000153685_03881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419780.1,SO:0001217,UniParc:UPI00000CCBB1,UniRef:UniRef100_O69663,UniRef:UniRef50_Q744I5,UniRef:UniRef90_A0A0H3LFG5
contig_1	Pyrodigal	gene	4134925	4136478	.	-	.	ID=GCA000153685_03882_gene;locus_tag=GCA000153685_03882;gene=glpK
contig_1	Pyrodigal	CDS	4134925	4136478	.	-	0	ID=GCA000153685_03882;Name=glycerol kinase GlpK;locus_tag=GCA000153685_03882;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563;gene=glpK;Parent=GCA000153685_03882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,KEGG:K00864,RefSeq:WP_003899643.1,SO:0001217,UniParc:UPI000012B78F,UniRef:UniRef100_P9WPK1,UniRef:UniRef50_Q9RJM2,UniRef:UniRef90_P9WPK1;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	4136528	4136965	.	-	.	ID=GCA000153685_03883_gene;locus_tag=GCA000153685_03883;gene=vapC48
contig_1	Pyrodigal	CDS	4136528	4136965	.	-	0	ID=GCA000153685_03883;Name=Ribonuclease VapC48;locus_tag=GCA000153685_03883;product=Ribonuclease VapC48;Dbxref=GO:0000287,GO:0004540,GO:0045926;gene=vapC48;Parent=GCA000153685_03883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899644.1,SO:0001217,UniParc:UPI00000D1066,UniRef:UniRef100_P9WF47,UniRef:UniRef50_P9WF47,UniRef:UniRef90_P9WF47;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	4136962	4137186	.	-	.	ID=GCA000153685_03884_gene;locus_tag=GCA000153685_03884;gene=vapB48
contig_1	Pyrodigal	CDS	4136962	4137186	.	-	0	ID=GCA000153685_03884;Name=Putative antitoxin VapB48;locus_tag=GCA000153685_03884;product=Putative antitoxin VapB48;gene=vapB48;Parent=GCA000153685_03884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419787.1,SO:0001217,UniParc:UPI00000D2DC1,UniRef:UniRef100_P9WJ15,UniRef:UniRef50_P9WJ15,UniRef:UniRef90_P9WJ15
contig_1	Pyrodigal	gene	4137207	4138745	.	+	.	ID=GCA000153685_03885_gene;locus_tag=GCA000153685_03885
contig_1	Pyrodigal	CDS	4137207	4138745	.	+	0	ID=GCA000153685_03885;Name=CBS domain-containing protein;locus_tag=GCA000153685_03885;product=CBS domain-containing protein;Parent=GCA000153685_03885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61FE7,UniRef:UniRef100_I6YCS6,UniRef:UniRef50_R4ME06,UniRef:UniRef90_R4ME06
contig_1	Pyrodigal	gene	4138767	4139468	.	+	.	ID=GCA000153685_03886_gene;locus_tag=GCA000153685_03886
contig_1	Pyrodigal	CDS	4138767	4139468	.	+	0	ID=GCA000153685_03886;Name=Conserved protein;locus_tag=GCA000153685_03886;product=Conserved protein;Parent=GCA000153685_03886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419793.1,SO:0001217,UniParc:UPI0000165376,UniRef:UniRef100_O69667,UniRef:UniRef50_A0A378WE42,UniRef:UniRef90_O69667
contig_1	Pyrodigal	gene	4139471	4140643	.	-	.	ID=GCA000153685_03887_gene;locus_tag=GCA000153685_03887;gene=egtE
contig_1	Pyrodigal	CDS	4139471	4140643	.	-	0	ID=GCA000153685_03887;Name=ergothioneine biosynthesis PLP-dependent enzyme EgtE;locus_tag=GCA000153685_03887;product=ergothioneine biosynthesis PLP-dependent enzyme EgtE;Dbxref=GO:0016829,GO:0052699,GO:0052704,GO:1990411;gene=egtE;Parent=GCA000153685_03887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18913,RefSeq:WP_003901701.1,SO:0001217,UniParc:UPI0000165377,UniRef:UniRef100_O69668,UniRef:UniRef50_Q7D515,UniRef:UniRef90_Q7D515;ec_number=4.4.-.-
contig_1	Pyrodigal	gene	4140674	4141639	.	-	.	ID=GCA000153685_03888_gene;locus_tag=GCA000153685_03888;gene=egtD
contig_1	Pyrodigal	CDS	4140674	4141639	.	-	0	ID=GCA000153685_03888;Name=L-histidine N(alpha)-methyltransferase;locus_tag=GCA000153685_03888;product=L-histidine N(alpha)-methyltransferase;Dbxref=GO:0005886,GO:0008276,GO:0032259,GO:0052699,GO:0052704,GO:0052706;gene=egtD;Parent=GCA000153685_03888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419799.1,SO:0001217,UniParc:UPI00000D0F95,UniRef:UniRef100_P9WN47,UniRef:UniRef50_P9WN47,UniRef:UniRef90_P9WN47;ec_number=2.1.1.44
contig_1	Pyrodigal	gene	4141636	4142337	.	-	.	ID=GCA000153685_03889_gene;locus_tag=GCA000153685_03889;gene=egtC
contig_1	Pyrodigal	CDS	4141636	4142337	.	-	0	ID=GCA000153685_03889;Name=ergothioneine biosynthesis protein EgtC;locus_tag=GCA000153685_03889;product=ergothioneine biosynthesis protein EgtC;Dbxref=GO:0005886,GO:0016811,GO:0052699,GO:0052704;gene=egtC;Parent=GCA000153685_03889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07008,RefSeq:WP_003419806.1,SO:0001217,UniParc:UPI00000C156D,UniRef:UniRef100_O69670,UniRef:UniRef50_Q8VIV2,UniRef:UniRef90_Q8VIV2;ec_number=3.5.1.118
contig_1	Pyrodigal	gene	4142337	4143614	.	-	.	ID=GCA000153685_03890_gene;locus_tag=GCA000153685_03890;gene=egtB
contig_1	Pyrodigal	CDS	4142337	4143614	.	-	0	ID=GCA000153685_03890;Name=ergothioneine biosynthesis protein EgtB;locus_tag=GCA000153685_03890;product=ergothioneine biosynthesis protein EgtB;Dbxref=GO:0004497,GO:0008198,GO:0016491,GO:0044875,GO:0052699,GO:0052704;gene=egtB;Parent=GCA000153685_03890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18912,RefSeq:WP_003899647.1,SO:0001217,UniParc:UPI00001651DB,UniRef:UniRef100_Q7D513,UniRef:UniRef50_Q7D513,UniRef:UniRef90_Q7D513;ec_number=1.14.99.50
contig_1	Pyrodigal	gene	4143611	4144909	.	-	.	ID=GCA000153685_03891_gene;locus_tag=GCA000153685_03891;gene=egtA
contig_1	Pyrodigal	CDS	4143611	4144909	.	-	0	ID=GCA000153685_03891;Name=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;locus_tag=GCA000153685_03891;product=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;Dbxref=GO:0004357,GO:0005524,GO:0005886,GO:0006750,GO:0052699;gene=egtA;Parent=GCA000153685_03891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419809.1,SO:0001217,UniParc:UPI00000D6052,UniRef:UniRef100_P9WPK7,UniRef:UniRef50_P9WPK7,UniRef:UniRef90_P9WPK7;ec_number=6.3.2.2
contig_1	Pyrodigal	gene	4145041	4145685	.	-	.	ID=GCA000153685_03892_gene;locus_tag=GCA000153685_03892
contig_1	Pyrodigal	CDS	4145041	4145685	.	-	0	ID=GCA000153685_03892;Name=PknH-like extracellular domain-containing protein;locus_tag=GCA000153685_03892;product=PknH-like extracellular domain-containing protein;Parent=GCA000153685_03892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003419812.1,SO:0001217,UniParc:UPI00000D11C7,UniRef:UniRef100_I6XI06,UniRef:UniRef50_A0A1A2NJV2,UniRef:UniRef90_R4MBD2
contig_1	Pyrodigal	gene	4146314	4146625	.	-	.	ID=GCA000153685_03893_gene;locus_tag=GCA000153685_03893
contig_1	Pyrodigal	CDS	4146314	4146625	.	-	0	ID=GCA000153685_03893;Name=Proline rich protein;locus_tag=GCA000153685_03893;product=Proline rich protein;Parent=GCA000153685_03893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001DD0311,UniRef:UniRef100_O69674,UniRef:UniRef50_O69674,UniRef:UniRef90_O69674
contig_1	Pyrodigal	gene	4146622	4146723	.	-	.	ID=GCA000153685_03894_gene;locus_tag=GCA000153685_03894
contig_1	Pyrodigal	CDS	4146622	4146723	.	-	0	ID=GCA000153685_03894;Name=hypothetical protein;locus_tag=GCA000153685_03894;product=hypothetical protein;Parent=GCA000153685_03894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42AB,UniRef:UniRef100_A0A0E7ZB53,UniRef:UniRef50_A0A0E7ZB53,UniRef:UniRef90_A0A0E7ZB53
contig_1	Pyrodigal	gene	4146753	4147901	.	-	.	ID=GCA000153685_03895_gene;locus_tag=GCA000153685_03895
contig_1	Pyrodigal	CDS	4146753	4147901	.	-	0	ID=GCA000153685_03895;Name=DUF4185 domain-containing protein;locus_tag=GCA000153685_03895;product=DUF4185 domain-containing protein;Parent=GCA000153685_03895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27495,RefSeq:WP_003899648.1,SO:0001217,UniParc:UPI00005EE8AD,UniRef:UniRef100_A0A066S164,UniRef:UniRef50_P41402,UniRef:UniRef90_I6Y4C4;ec_number=3.2.1.226
contig_1	Pyrodigal	gene	4147903	4148940	.	-	.	ID=GCA000153685_03896_gene;locus_tag=GCA000153685_03896;gene=asd
contig_1	Pyrodigal	CDS	4147903	4148940	.	-	0	ID=GCA000153685_03896;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000153685_03896;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0005886,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009274,GO:0019877,GO:0046983,GO:0050661,GO:0051287,GO:0071266;gene=asd;Parent=GCA000153685_03896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00133,RefSeq:WP_003419825.1,SO:0001217,UniParc:UPI00001292AD,UniRef:UniRef100_P9WNX5,UniRef:UniRef50_P9WNX5,UniRef:UniRef90_P9WNX5;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	4148941	4150206	.	-	.	ID=GCA000153685_03897_gene;locus_tag=GCA000153685_03897;gene=ask
contig_1	Pyrodigal	CDS	4148941	4150206	.	-	0	ID=GCA000153685_03897;Name=aspartate kinase;locus_tag=GCA000153685_03897;product=aspartate kinase;Dbxref=GO:0004072,GO:0005524,GO:0005829,GO:0005886,GO:0008652,GO:0009088,GO:0009089,GO:0009090,GO:0009274,GO:0019877;gene=ask;Parent=GCA000153685_03897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_003419828.1,SO:0001217,UniParc:UPI0000125787,UniRef:UniRef100_P9WPX3,UniRef:UniRef50_P9WPX3,UniRef:UniRef90_P9WPX3;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	4150463	4152454	.	+	.	ID=GCA000153685_03898_gene;locus_tag=GCA000153685_03898;gene=leuA
contig_1	Pyrodigal	CDS	4150463	4152454	.	+	0	ID=GCA000153685_03898;Name=2-isopropylmalate synthase;locus_tag=GCA000153685_03898;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0009098;gene=leuA;Parent=GCA000153685_03898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01649,RefSeq:WP_021036415.1,SO:0001217,UniParc:UPI0002E199F4,UniRef:UniRef100_UPI0002E199F4,UniRef:UniRef50_Q7TVV6,UniRef:UniRef90_UPI0002E199F4;ec_number=2.3.3.13
contig_1	Pyrodigal	gene	4152520	4153509	.	-	.	ID=GCA000153685_03899_gene;locus_tag=GCA000153685_03899
contig_1	Pyrodigal	CDS	4152520	4153509	.	-	0	ID=GCA000153685_03899;Name=DEDDh family exonuclease;locus_tag=GCA000153685_03899;product=DEDDh family exonuclease;Dbxref=GO:0003677,GO:0006260;Parent=GCA000153685_03899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900737.1,SO:0001217,UniParc:UPI00001651DD,UniRef:UniRef100_A0A0H3LGK4,UniRef:UniRef50_I7GAG5,UniRef:UniRef90_A0A045KCD6
contig_1	Pyrodigal	gene	4153820	4155061	.	+	.	ID=GCA000153685_03900_gene;locus_tag=GCA000153685_03900;gene=murT
contig_1	Pyrodigal	CDS	4153820	4155061	.	+	0	ID=GCA000153685_03900;Name=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT;locus_tag=GCA000153685_03900;product=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT;gene=murT;Parent=GCA000153685_03900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23393,RefSeq:WP_003900738.1,SO:0001217,UniParc:UPI00000D6024,UniRef:UniRef100_I6Y4C7,UniRef:UniRef50_I6Y4C7,UniRef:UniRef90_I6Y4C7;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	4155054	4155761	.	+	.	ID=GCA000153685_03901_gene;locus_tag=GCA000153685_03901;gene=gatD
contig_1	Pyrodigal	CDS	4155054	4155761	.	+	0	ID=GCA000153685_03901;Name=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;locus_tag=GCA000153685_03901;product=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;gene=gatD;Parent=GCA000153685_03901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07009,SO:0001217,UniParc:UPI00005EE8AF,UniRef:UniRef100_A0A066S0B4,UniRef:UniRef50_A0A653F1R8,UniRef:UniRef90_A0A1A2DA24;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	4155770	4156624	.	-	.	ID=GCA000153685_03902_gene;locus_tag=GCA000153685_03902
contig_1	Pyrodigal	CDS	4155770	4156624	.	-	0	ID=GCA000153685_03902;Name=Cullin%2C a subunit of E3 ubiquitin ligase;locus_tag=GCA000153685_03902;product=Cullin%2C a subunit of E3 ubiquitin ligase;Parent=GCA000153685_03902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E61EA4,UniRef:UniRef100_O69681,UniRef:UniRef50_O69681,UniRef:UniRef90_O69681
contig_1	Pyrodigal	gene	4156728	4157339	.	-	.	ID=GCA000153685_03903_gene;locus_tag=GCA000153685_03903;gene=recR
contig_1	Pyrodigal	CDS	4156728	4157339	.	-	0	ID=GCA000153685_03903;Name=recombination mediator RecR;locus_tag=GCA000153685_03903;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000153685_03903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_003420407.1,SO:0001217,UniParc:UPI00001335D0,UniRef:UniRef100_P9WHI3,UniRef:UniRef50_P9WHI3,UniRef:UniRef90_P9WHI3
contig_1	Pyrodigal	gene	4157351	4157734	.	-	.	ID=GCA000153685_03904_gene;locus_tag=GCA000153685_03904
contig_1	Pyrodigal	CDS	4157351	4157734	.	-	0	ID=GCA000153685_03904;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000153685_03904;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;Parent=GCA000153685_03904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09747,SO:0001217,UniParc:UPI0001545706,UniRef:UniRef100_P9WNR9,UniRef:UniRef50_P9WNR9,UniRef:UniRef90_P9WNR9
contig_1	Pyrodigal	gene	4157887	4158612	.	+	.	ID=GCA000153685_03905_gene;locus_tag=GCA000153685_03905
contig_1	Pyrodigal	CDS	4157887	4158612	.	+	0	ID=GCA000153685_03905;Name=Rv3717 family N-acetylmuramoyl-L-alanine amidase;locus_tag=GCA000153685_03905;product=Rv3717 family N-acetylmuramoyl-L-alanine amidase;Dbxref=GO:0008745,GO:0009253,GO:0016998,GO:0030288,GO:0043093,GO:0046872,GO:0071555;Parent=GCA000153685_03905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420410.1,SO:0001217,UniParc:UPI00000D5F16,UniRef:UniRef100_I6Y4D2,UniRef:UniRef50_I6Y4D2,UniRef:UniRef90_I6Y4D2;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	4158654	4159097	.	-	.	ID=GCA000153685_03906_gene;locus_tag=GCA000153685_03906
contig_1	Pyrodigal	CDS	4158654	4159097	.	-	0	ID=GCA000153685_03906;Name=Polyketide cyclase;locus_tag=GCA000153685_03906;product=Polyketide cyclase;Parent=GCA000153685_03906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900740.1,SO:0001217,UniParc:UPI0001278174,UniRef:UniRef100_UPI0001278174,UniRef:UniRef50_Q7APW4,UniRef:UniRef90_R4MCN9
contig_1	Pyrodigal	gene	4159145	4160557	.	+	.	ID=GCA000153685_03907_gene;locus_tag=GCA000153685_03907
contig_1	Pyrodigal	CDS	4159145	4160557	.	+	0	ID=GCA000153685_03907;Name=FAD-binding PCMH-type domain-containing protein;locus_tag=GCA000153685_03907;product=FAD-binding PCMH-type domain-containing protein;Parent=GCA000153685_03907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420413.1,SO:0001217,UniParc:UPI00001A9262,UniRef:UniRef100_A0A1R3Y6K4,UniRef:UniRef50_A0A3G8JQE8,UniRef:UniRef90_A0A0H3LFH9
contig_1	Pyrodigal	gene	4160554	4161837	.	+	.	ID=GCA000153685_03908_gene;locus_tag=GCA000153685_03908
contig_1	Pyrodigal	CDS	4160554	4161837	.	+	0	ID=GCA000153685_03908;Name=putative fatty acid methyltransferase Rv3720;locus_tag=GCA000153685_03908;product=putative fatty acid methyltransferase Rv3720;Dbxref=GO:0005886,GO:0008610,GO:0008825,GO:0009274,GO:0032259;Parent=GCA000153685_03908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00574,RefSeq:WP_003899652.1,SO:0001217,UniParc:UPI00000D4FED,UniRef:UniRef100_O69687,UniRef:UniRef50_O69687,UniRef:UniRef90_O69687;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	4161834	4163570	.	-	.	ID=GCA000153685_03909_gene;locus_tag=GCA000153685_03909;gene=dnaX
contig_1	Pyrodigal	CDS	4161834	4163570	.	-	0	ID=GCA000153685_03909;Name=DNA polymerase III subunits gamma/tau;locus_tag=GCA000153685_03909;product=DNA polymerase III subunits gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006261,GO:0009360,GO:0016887,GO:0046872;gene=dnaX;Parent=GCA000153685_03909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420417.1,SO:0001217,UniParc:UPI0000129720,UniRef:UniRef100_P9WNT9,UniRef:UniRef50_P9WNT9,UniRef:UniRef90_P9WNT9;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	4163660	4164967	.	-	.	ID=GCA000153685_03910_gene;locus_tag=GCA000153685_03910
contig_1	Pyrodigal	CDS	4163660	4164967	.	-	0	ID=GCA000153685_03910;Name=Aspartate aminotransferase;locus_tag=GCA000153685_03910;product=Aspartate aminotransferase;Dbxref=GO:0004069,GO:0005576;Parent=GCA000153685_03910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899653.1,SO:0001217,UniParc:UPI00000CCBB4,UniRef:UniRef100_O69689,UniRef:UniRef50_O69689,UniRef:UniRef90_O69689;ec_number=2.6.1.1
contig_1	Infernal	gene	4165029	4165123	.	-	.	ID=GCA000153685_03911_gene;locus_tag=GCA000153685_03911;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	4165029	4165123	6.8e-11	-	.	ID=GCA000153685_03911;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000153685_03911;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000153685_03911_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	tRNAscan-SE	gene	4165184	4165272	.	+	.	ID=GCA000153685_03912_gene;locus_tag=GCA000153685_03912;gene=trnS
contig_1	tRNAscan-SE	tRNA	4165184	4165272	.	+	.	ID=GCA000153685_03912;Name=tRNA-Ser(gga);locus_tag=GCA000153685_03912;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000153685_03912_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	4165375	4166139	.	+	.	ID=GCA000153685_03913_gene;locus_tag=GCA000153685_03913;gene=lucA
contig_1	Pyrodigal	CDS	4165375	4166139	.	+	0	ID=GCA000153685_03913;Name=lipid uptake coordinator LucA;locus_tag=GCA000153685_03913;product=lipid uptake coordinator LucA;Dbxref=GO:0005886;gene=lucA;Parent=GCA000153685_03913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420421,RefSeq:WP_003420421.1,SO:0001217,UniParc:UPI00000D0F8B,UniRef:UniRef100_O69690,UniRef:UniRef50_O69690,UniRef:UniRef90_O69690
contig_1	Pyrodigal	gene	4166445	4167008	.	+	.	ID=GCA000153685_03914_gene;locus_tag=GCA000153685_03914;gene=cut5b
contig_1	Pyrodigal	CDS	4166445	4167008	.	+	0	ID=GCA000153685_03914;Name=putative carboxylesterase Culp7;locus_tag=GCA000153685_03914;product=putative carboxylesterase Culp7;Dbxref=GO:0005576,GO:0005737,GO:0005886,GO:0052689;gene=cut5b;Parent=GCA000153685_03914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000016537B,UniRef:UniRef100_Q79FA4,UniRef:UniRef50_Q79FA4,UniRef:UniRef90_Q79FA4;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	4166888	4167766	.	-	.	ID=GCA000153685_03915_gene;locus_tag=GCA000153685_03915
contig_1	Pyrodigal	CDS	4166888	4167766	.	-	0	ID=GCA000153685_03915;Name=Transposase;locus_tag=GCA000153685_03915;product=Transposase;Parent=GCA000153685_03915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E2F916,UniRef:UniRef100_A0A0E9A7A4,UniRef:UniRef50_A0A0E9A7A4,UniRef:UniRef90_A0A0E9A7A4
contig_1	Pyrodigal	gene	4167820	4168053	.	+	.	ID=GCA000153685_03916_gene;locus_tag=GCA000153685_03916
contig_1	Pyrodigal	CDS	4167820	4168053	.	+	0	ID=GCA000153685_03916;Name=Oxidoreductase;locus_tag=GCA000153685_03916;product=Oxidoreductase;Parent=GCA000153685_03916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8B2,UniRef:UniRef100_A0A076BBY7,UniRef:UniRef50_A0A3S5D051,UniRef:UniRef90_A0A076BBY7
contig_1	Pyrodigal	gene	4168050	4168196	.	-	.	ID=GCA000153685_03917_gene;locus_tag=GCA000153685_03917
contig_1	Pyrodigal	CDS	4168050	4168196	.	-	0	ID=GCA000153685_03917;Name=Transmembrane protein;locus_tag=GCA000153685_03917;product=Transmembrane protein;Parent=GCA000153685_03917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420429.1,SO:0001217,UniParc:UPI0001901368,UniRef:UniRef100_A0A654T3W2,UniRef:UniRef50_A0A654T3W2,UniRef:UniRef90_A0A654T3W2
contig_1	Pyrodigal	gene	4168260	4169453	.	+	.	ID=GCA000153685_03918_gene;locus_tag=GCA000153685_03918
contig_1	Pyrodigal	CDS	4168260	4169453	.	+	0	ID=GCA000153685_03918;Name=Dehydrogenase;locus_tag=GCA000153685_03918;product=Dehydrogenase;Parent=GCA000153685_03918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900742.1,SO:0001217,UniParc:UPI00000D5E89,UniRef:UniRef100_O69693,UniRef:UniRef50_A0A378YC68,UniRef:UniRef90_A0A655A251
contig_1	Pyrodigal	gene	4169794	4171602	.	+	.	ID=GCA000153685_03919_gene;locus_tag=GCA000153685_03919
contig_1	Pyrodigal	CDS	4169794	4171602	.	+	0	ID=GCA000153685_03919;Name=putative oxidoreductase;locus_tag=GCA000153685_03919;product=putative oxidoreductase;Parent=GCA000153685_03919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420431.1,SO:0001217,UniParc:UPI00000D106B,UniRef:UniRef100_O69694,UniRef:UniRef50_A0A3E2MUW2,UniRef:UniRef90_O69694
contig_1	Pyrodigal	gene	4171835	4174909	.	+	.	ID=GCA000153685_03920_gene;locus_tag=GCA000153685_03920
contig_1	Pyrodigal	CDS	4171835	4174909	.	+	0	ID=GCA000153685_03920;Name=Drug transporter;locus_tag=GCA000153685_03920;product=Drug transporter;Parent=GCA000153685_03920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8B4,UniRef:UniRef100_A0A0H3LK70,UniRef:UniRef50_A0A0I9Z0Z6,UniRef:UniRef90_A0A0H3LK70
contig_1	Pyrodigal	gene	4175088	4177454	.	+	.	ID=GCA000153685_03921_gene;locus_tag=GCA000153685_03921
contig_1	Pyrodigal	CDS	4175088	4177454	.	+	0	ID=GCA000153685_03921;Name=putative transferase;locus_tag=GCA000153685_03921;product=putative transferase;Parent=GCA000153685_03921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06937,RefSeq:WP_003900744.1,SO:0001217,UniParc:UPI000127818F,UniRef:UniRef100_A0A0E9AHM5,UniRef:UniRef50_A0A655IHW1,UniRef:UniRef90_A0A655IHW1;ec_number=1.21.98.5
contig_1	Pyrodigal	gene	4177519	4178559	.	-	.	ID=GCA000153685_03922_gene;locus_tag=GCA000153685_03922
contig_1	Pyrodigal	CDS	4177519	4178559	.	-	0	ID=GCA000153685_03922;Name=DNA ligase D polymerase domain-containing protein;locus_tag=GCA000153685_03922;product=DNA ligase D polymerase domain-containing protein;Parent=GCA000153685_03922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01971,RefSeq:WP_003899657.1,SO:0001217,UniParc:UPI00000D0F4F,UniRef:UniRef100_O69697,UniRef:UniRef50_A0A0J6VGA7,UniRef:UniRef90_O69697;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	4178597	4179673	.	+	.	ID=GCA000153685_03923_gene;locus_tag=GCA000153685_03923;gene=ligC
contig_1	Pyrodigal	CDS	4178597	4179673	.	+	0	ID=GCA000153685_03923;Name=ATP-dependent DNA ligase;locus_tag=GCA000153685_03923;product=ATP-dependent DNA ligase;Dbxref=GO:0003910,GO:0005524,GO:0006281,GO:0006310;gene=ligC;Parent=GCA000153685_03923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01971,RefSeq:WP_003420435.1,SO:0001217,UniParc:UPI00001651DE,UniRef:UniRef100_A0A1R3Y525,UniRef:UniRef50_L0TDE1,UniRef:UniRef90_L0TDE1;ec_number=6.5.1.1
contig_1	Pyrodigal	gene	4179773	4180831	.	+	.	ID=GCA000153685_03924_gene;locus_tag=GCA000153685_03924
contig_1	Pyrodigal	CDS	4179773	4180831	.	+	0	ID=GCA000153685_03924;Name=DUF2330 domain-containing protein;locus_tag=GCA000153685_03924;product=DUF2330 domain-containing protein;Parent=GCA000153685_03924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420436.1,SO:0001217,UniParc:UPI00000D101F,UniRef:UniRef100_O69699,UniRef:UniRef50_A0A1A0MDA6,UniRef:UniRef90_A0A9P2H4F2
contig_1	Pyrodigal	gene	4180851	4181351	.	-	.	ID=GCA000153685_03925_gene;locus_tag=GCA000153685_03925
contig_1	Pyrodigal	CDS	4180851	4181351	.	-	0	ID=GCA000153685_03925;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000153685_03925;product=Nudix hydrolase domain-containing protein;Parent=GCA000153685_03925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420437.1,SO:0001217,UniParc:UPI00000D0FBC,UniRef:UniRef100_O69700,UniRef:UniRef50_A0A6N4VDR6,UniRef:UniRef90_O69700
contig_1	Pyrodigal	gene	4181365	4182717	.	-	.	ID=GCA000153685_03926_gene;locus_tag=GCA000153685_03926;gene=tgs2
contig_1	Pyrodigal	CDS	4181365	4182717	.	-	0	ID=GCA000153685_03926;Name=Putative diacyglycerol O-acyltransferase Mb3761c;locus_tag=GCA000153685_03926;product=Putative diacyglycerol O-acyltransferase Mb3761c;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0019432,GO:0051701,GO:0071731;gene=tgs2;Parent=GCA000153685_03926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00039B0836,UniRef:UniRef100_P9WKC7,UniRef:UniRef50_P9WKC7,UniRef:UniRef90_P9WKC7;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	4182928	4183416	.	+	.	ID=GCA000153685_03927_gene;locus_tag=GCA000153685_03927
contig_1	Pyrodigal	CDS	4182928	4183416	.	+	0	ID=GCA000153685_03927;Name=Adenosine specific kinase;locus_tag=GCA000153685_03927;product=Adenosine specific kinase;Parent=GCA000153685_03927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09129,RefSeq:WP_003899658.1,SO:0001217,UniParc:UPI000016537D,UniRef:UniRef100_O69702,UniRef:UniRef50_A0A1F9I8S6,UniRef:UniRef90_O69702
contig_1	Pyrodigal	gene	4183473	4184534	.	+	.	ID=GCA000153685_03928_gene;locus_tag=GCA000153685_03928
contig_1	Pyrodigal	CDS	4183473	4184534	.	+	0	ID=GCA000153685_03928;Name=Transcriptional regulator;locus_tag=GCA000153685_03928;product=Transcriptional regulator;Parent=GCA000153685_03928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899659.1,SO:0001217,UniParc:UPI00000D5EF1,UniRef:UniRef100_O69703,UniRef:UniRef50_A0A1A2XCT0,UniRef:UniRef90_A0A0H3LFJ6
contig_1	Pyrodigal	gene	4184568	4186127	.	+	.	ID=GCA000153685_03929_gene;locus_tag=GCA000153685_03929
contig_1	Pyrodigal	CDS	4184568	4186127	.	+	0	ID=GCA000153685_03929;Name=putative threonine/serine exporter;locus_tag=GCA000153685_03929;product=putative threonine/serine exporter;Dbxref=GO:0005829,GO:0005886,GO:0006865,GO:0022857;Parent=GCA000153685_03929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E30984,UniRef:UniRef100_A0A9P1PEQ6,UniRef:UniRef50_O69704,UniRef:UniRef90_O69704
contig_1	Pyrodigal	gene	4186124	4187071	.	-	.	ID=GCA000153685_03930_gene;locus_tag=GCA000153685_03930;gene=pPE66
contig_1	Pyrodigal	CDS	4186124	4187071	.	-	0	ID=GCA000153685_03930;Name=putative PPE family protein PPE66;locus_tag=GCA000153685_03930;product=putative PPE family protein PPE66;Dbxref=GO:0005886,GO:0052572;gene=pPE66;Parent=GCA000153685_03930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899661.1,SO:0001217,UniParc:UPI00000D3B0B,UniRef:UniRef100_P9WHX1,UniRef:UniRef50_P9WHX1,UniRef:UniRef90_P9WHX1
contig_1	Pyrodigal	gene	4187123	4187356	.	-	.	ID=GCA000153685_03931_gene;locus_tag=GCA000153685_03931;gene=pPE66
contig_1	Pyrodigal	CDS	4187123	4187356	.	-	0	ID=GCA000153685_03931;Name=putative PPE family protein PPE66;locus_tag=GCA000153685_03931;product=putative PPE family protein PPE66;Dbxref=GO:0005886,GO:0052572;gene=pPE66;Parent=GCA000153685_03931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899662.1,SO:0001217,UniParc:UPI00000D4504,UniRef:UniRef100_Q79FA2,UniRef:UniRef50_P9WHX1,UniRef:UniRef90_P9WHX1
contig_1	Pyrodigal	gene	4187672	4189027	.	-	.	ID=GCA000153685_03932_gene;locus_tag=GCA000153685_03932
contig_1	Pyrodigal	CDS	4187672	4189027	.	-	0	ID=GCA000153685_03932;Name=Putative diacyglycerol O-acyltransferase Rv3740c;locus_tag=GCA000153685_03932;product=Putative diacyglycerol O-acyltransferase Rv3740c;Dbxref=GO:0001666,GO:0004144,GO:0005886,GO:0006071,GO:0008374,GO:0010025,GO:0019432,GO:0047196,GO:0051701,GO:0071731;Parent=GCA000153685_03932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8B8,UniRef:UniRef100_P9WKA5,UniRef:UniRef50_P9WKC7,UniRef:UniRef90_P9WKA5;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	4189018	4189692	.	-	.	ID=GCA000153685_03933_gene;locus_tag=GCA000153685_03933
contig_1	Pyrodigal	CDS	4189018	4189692	.	-	0	ID=GCA000153685_03933;Name=putative oxidoreductase;locus_tag=GCA000153685_03933;product=putative oxidoreductase;Parent=GCA000153685_03933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900747.1,SO:0001217,UniParc:UPI00000CCBB6,UniRef:UniRef100_O69708,UniRef:UniRef50_O69708,UniRef:UniRef90_O69708
contig_1	Pyrodigal	gene	4189689	4190084	.	-	.	ID=GCA000153685_03934_gene;locus_tag=GCA000153685_03934
contig_1	Pyrodigal	CDS	4189689	4190084	.	-	0	ID=GCA000153685_03934;Name=putative oxidoreductase;locus_tag=GCA000153685_03934;product=putative oxidoreductase;Parent=GCA000153685_03934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003902720.1,SO:0001217,UniParc:UPI00000D0F25,UniRef:UniRef100_O69709,UniRef:UniRef50_O69709,UniRef:UniRef90_O69709
contig_1	Pyrodigal	gene	4190230	4192212	.	-	.	ID=GCA000153685_03935_gene;locus_tag=GCA000153685_03935;gene=ctpJ
contig_1	Pyrodigal	CDS	4190230	4192212	.	-	0	ID=GCA000153685_03935;Name=putative cation-transporting P-type ATPase J;locus_tag=GCA000153685_03935;product=putative cation-transporting P-type ATPase J;Dbxref=GO:0003689,GO:0005524,GO:0005886,GO:0016887,GO:0019829,GO:0046872,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ctpJ;Parent=GCA000153685_03935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899665.1,SO:0001217,UniParc:UPI00000D5F92,UniRef:UniRef100_P9WPT7,UniRef:UniRef50_P9WPT7,UniRef:UniRef90_P9WPT7;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	4192279	4192641	.	+	.	ID=GCA000153685_03936_gene;locus_tag=GCA000153685_03936;gene=nmtR
contig_1	Pyrodigal	CDS	4192279	4192641	.	+	0	ID=GCA000153685_03936;Name=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;locus_tag=GCA000153685_03936;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;Dbxref=GO:0003677,GO:0003700,GO:0046872;gene=nmtR;Parent=GCA000153685_03936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901716,RefSeq:WP_003901716.1,SO:0001217,UniParc:UPI000016537E,UniRef:UniRef100_O69711,UniRef:UniRef50_O69711,UniRef:UniRef90_O69711
contig_1	Pyrodigal	gene	4192725	4192937	.	-	.	ID=GCA000153685_03937_gene;locus_tag=GCA000153685_03937
contig_1	Pyrodigal	CDS	4192725	4192937	.	-	0	ID=GCA000153685_03937;Name=DUF2237 domain-containing protein;locus_tag=GCA000153685_03937;product=DUF2237 domain-containing protein;Parent=GCA000153685_03937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09966,RefSeq:WP_003899668.1,SO:0001217,UniParc:UPI00000D1137,UniRef:UniRef100_O69712,UniRef:UniRef50_O69712,UniRef:UniRef90_O69712
contig_1	Pyrodigal	gene	4193010	4193345	.	-	.	ID=GCA000153685_03938_gene;locus_tag=GCA000153685_03938
contig_1	Pyrodigal	CDS	4193010	4193345	.	-	0	ID=GCA000153685_03938;Name=PE family protein PE34;locus_tag=GCA000153685_03938;product=PE family protein PE34;Parent=GCA000153685_03938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899670.1,SO:0001217,UniParc:UPI000016537F,UniRef:UniRef100_Q7D4Y1,UniRef:UniRef50_A0A1V3X9M3,UniRef:UniRef90_A0A2I7WDH5
contig_1	Pyrodigal	gene	4193563	4193946	.	+	.	ID=GCA000153685_03939_gene;locus_tag=GCA000153685_03939
contig_1	Pyrodigal	CDS	4193563	4193946	.	+	0	ID=GCA000153685_03939;Name=Conserved protein;locus_tag=GCA000153685_03939;product=Conserved protein;Parent=GCA000153685_03939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899671.1,SO:0001217,UniParc:UPI00000C156E,UniRef:UniRef100_O69714,UniRef:UniRef50_A0A557XSS8,UniRef:UniRef90_O69714
contig_1	Pyrodigal	gene	4194076	4194435	.	+	.	ID=GCA000153685_03940_gene;locus_tag=GCA000153685_03940
contig_1	Pyrodigal	CDS	4194076	4194435	.	+	0	ID=GCA000153685_03940;Name=YtkA-like domain-containing protein;locus_tag=GCA000153685_03940;product=YtkA-like domain-containing protein;Parent=GCA000153685_03940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899672.1,SO:0001217,UniParc:UPI00000C156F,UniRef:UniRef100_O69715,UniRef:UniRef50_A0A0Q2QUX7,UniRef:UniRef90_O69715
contig_1	Pyrodigal	gene	4194468	4194758	.	-	.	ID=GCA000153685_03941_gene;locus_tag=GCA000153685_03941
contig_1	Pyrodigal	CDS	4194468	4194758	.	-	0	ID=GCA000153685_03941;Name=Conserved protein of putative function (Part2);locus_tag=GCA000153685_03941;product=Conserved protein of putative function (Part2);Parent=GCA000153685_03941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014848123.1,SO:0001217,UniParc:UPI00026D42AD,UniRef:UniRef100_A0A0E8VDB3,UniRef:UniRef50_A0A0E8VDB3,UniRef:UniRef90_A0A0E8VDB3
contig_1	Pyrodigal	gene	4194724	4195032	.	-	.	ID=GCA000153685_03942_gene;locus_tag=GCA000153685_03942
contig_1	Pyrodigal	CDS	4194724	4195032	.	-	0	ID=GCA000153685_03942;Name=DNA-binding protein;locus_tag=GCA000153685_03942;product=DNA-binding protein;Parent=GCA000153685_03942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B36,UniRef:UniRef100_A0A0E7X0D4,UniRef:UniRef50_A0A0E7X0D4,UniRef:UniRef90_A0A0E7X0D4
contig_1	Pyrodigal	gene	4195045	4195371	.	-	.	ID=GCA000153685_03943_gene;locus_tag=GCA000153685_03943;gene=vapB50
contig_1	Pyrodigal	CDS	4195045	4195371	.	-	0	ID=GCA000153685_03943;Name=Putative antitoxin VapB50;locus_tag=GCA000153685_03943;product=Putative antitoxin VapB50;Dbxref=GO:0003677;gene=vapB50;Parent=GCA000153685_03943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E62C55,UniRef:UniRef100_O69717,UniRef:UniRef50_O69717,UniRef:UniRef90_O69717
contig_1	Pyrodigal	gene	4195713	4195928	.	+	.	ID=GCA000153685_03944_gene;locus_tag=GCA000153685_03944
contig_1	Pyrodigal	CDS	4195713	4195928	.	+	0	ID=GCA000153685_03944;Name=Transposase from transposon Tn916;locus_tag=GCA000153685_03944;product=Transposase from transposon Tn916;Parent=GCA000153685_03944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899674.1,SO:0001217,UniParc:UPI00000D3B0C,UniRef:UniRef100_A5U978,UniRef:UniRef50_A0A2I7WE15,UniRef:UniRef90_A0A2I7WE15
contig_1	tRNAscan-SE	gene	4195967	4196056	.	-	.	ID=GCA000153685_03945_gene;locus_tag=GCA000153685_03945;gene=trnS
contig_1	tRNAscan-SE	tRNA	4195967	4196056	.	-	.	ID=GCA000153685_03945;Name=tRNA-Ser(cga);locus_tag=GCA000153685_03945;product=tRNA-Ser(cga);gene=trnS;anti_codon=cga;amino_acid=Ser;Parent=GCA000153685_03945_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	4196086	4196544	.	-	.	ID=GCA000153685_03946_gene;locus_tag=GCA000153685_03946;gene=tadA
contig_1	Pyrodigal	CDS	4196086	4196544	.	-	0	ID=GCA000153685_03946;Name=tRNA-specific adenosine deaminase;locus_tag=GCA000153685_03946;product=tRNA-specific adenosine deaminase;gene=tadA;Parent=GCA000153685_03946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_003420508.1,SO:0001217,UniParc:UPI00000D5E97,UniRef:UniRef100_O69719,UniRef:UniRef50_A0A498QZ38,UniRef:UniRef90_A0A498QZ38;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	4196560	4197081	.	-	.	ID=GCA000153685_03947_gene;locus_tag=GCA000153685_03947
contig_1	Pyrodigal	CDS	4196560	4197081	.	-	0	ID=GCA000153685_03947;Name=Protein Rv3753c;locus_tag=GCA000153685_03947;product=Protein Rv3753c;Parent=GCA000153685_03947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899676.1,SO:0001217,UniParc:UPI0000EF47B0,UniRef:UniRef100_O69720,UniRef:UniRef50_O69720,UniRef:UniRef90_O69720
contig_1	Pyrodigal	gene	4197221	4198165	.	+	.	ID=GCA000153685_03948_gene;locus_tag=GCA000153685_03948;gene=tyrA
contig_1	Pyrodigal	CDS	4197221	4198165	.	+	0	ID=GCA000153685_03948;Name=prephenate dehydrogenase;locus_tag=GCA000153685_03948;product=prephenate dehydrogenase;Dbxref=GO:0004665,GO:0006571,GO:0008977,GO:0070403;gene=tyrA;Parent=GCA000153685_03948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912273.1,SO:0001217,UniParc:UPI00005EE8BD,UniRef:UniRef100_A0A0H3LFL9,UniRef:UniRef50_O69721,UniRef:UniRef90_O69721;ec_number=1.3.1.12
contig_1	Pyrodigal	gene	4198128	4198649	.	-	.	ID=GCA000153685_03949_gene;locus_tag=GCA000153685_03949
contig_1	Pyrodigal	CDS	4198128	4198649	.	-	0	ID=GCA000153685_03949;Name=Glycolipid-binding family protein;locus_tag=GCA000153685_03949;product=Glycolipid-binding family protein;Parent=GCA000153685_03949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014585455.1,SO:0001217,UniParc:UPI000217888F,UniRef:UniRef100_O86358,UniRef:UniRef50_K0EMG1,UniRef:UniRef90_A0A1X2LWF1
contig_1	Pyrodigal	gene	4198733	4199452	.	-	.	ID=GCA000153685_03950_gene;locus_tag=GCA000153685_03950;gene=proZ
contig_1	Pyrodigal	CDS	4198733	4199452	.	-	0	ID=GCA000153685_03950;Name=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;locus_tag=GCA000153685_03950;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;gene=proZ;Parent=GCA000153685_03950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420520,RefSeq:WP_003420520.1,SO:0001217,UniParc:UPI00000D5E62,UniRef:UniRef100_O69722,UniRef:UniRef50_O69722,UniRef:UniRef90_O69722
contig_1	Pyrodigal	gene	4199449	4200138	.	-	.	ID=GCA000153685_03951_gene;locus_tag=GCA000153685_03951;gene=proW
contig_1	Pyrodigal	CDS	4199449	4200138	.	-	0	ID=GCA000153685_03951;Name=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;locus_tag=GCA000153685_03951;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;gene=proW;Parent=GCA000153685_03951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420526,RefSeq:WP_003420526.1,SO:0001217,UniParc:UPI00000D5FFA,UniRef:UniRef100_O69723,UniRef:UniRef50_O69723,UniRef:UniRef90_O69723
contig_1	Pyrodigal	gene	4200126	4201256	.	-	.	ID=GCA000153685_03952_gene;locus_tag=GCA000153685_03952;gene=proV
contig_1	Pyrodigal	CDS	4200126	4201256	.	-	0	ID=GCA000153685_03952;Name=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;locus_tag=GCA000153685_03952;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;gene=proV;Parent=GCA000153685_03952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420529,RefSeq:WP_003420529.1,SO:0001217,UniParc:UPI00000D4FF5,UniRef:UniRef100_O69724,UniRef:UniRef50_O69724,UniRef:UniRef90_O69724;ec_number=7.6.2.9
contig_1	Pyrodigal	gene	4201265	4202296	.	-	.	ID=GCA000153685_03953_gene;locus_tag=GCA000153685_03953;gene=proX
contig_1	Pyrodigal	CDS	4201265	4202296	.	-	0	ID=GCA000153685_03953;Name=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;locus_tag=GCA000153685_03953;product=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;gene=proX;Parent=GCA000153685_03953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003907122,SO:0001217,UniParc:UPI00000D2DCA,UniRef:UniRef100_Q8VIU4,UniRef:UniRef50_O69725,UniRef:UniRef90_O69725
contig_1	Pyrodigal	gene	4202326	4202679	.	+	.	ID=GCA000153685_03954_gene;locus_tag=GCA000153685_03954
contig_1	Pyrodigal	CDS	4202326	4202679	.	+	0	ID=GCA000153685_03954;Name=putative membrane protein Rv3760;locus_tag=GCA000153685_03954;product=putative membrane protein Rv3760;Dbxref=GO:0005886;Parent=GCA000153685_03954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899680.1,SO:0001217,UniParc:UPI00000CCBB7,UniRef:UniRef100_O69726,UniRef:UniRef50_O69726,UniRef:UniRef90_O69726
contig_1	Pyrodigal	gene	4202701	4203756	.	-	.	ID=GCA000153685_03955_gene;locus_tag=GCA000153685_03955
contig_1	Pyrodigal	CDS	4202701	4203756	.	-	0	ID=GCA000153685_03955;Name=putative acyl-CoA dehydrogenase FadE36;locus_tag=GCA000153685_03955;product=putative acyl-CoA dehydrogenase FadE36;Parent=GCA000153685_03955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420539.1,SO:0001217,UniParc:UPI00000D0F4B,UniRef:UniRef100_O69727,UniRef:UniRef50_O69727,UniRef:UniRef90_O69727
contig_1	Pyrodigal	gene	4203835	4205709	.	-	.	ID=GCA000153685_03956_gene;locus_tag=GCA000153685_03956
contig_1	Pyrodigal	CDS	4203835	4205709	.	-	0	ID=GCA000153685_03956;Name=Hydrolase;locus_tag=GCA000153685_03956;product=Hydrolase;Parent=GCA000153685_03956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K25227,SO:0001217,UniParc:UPI00005EE8C0,UniRef:UniRef100_Q7D4W9,UniRef:UniRef50_E4N3G9,UniRef:UniRef90_A0A0H3MAL5;ec_number=3.1.6.21
contig_1	Pyrodigal	gene	4205886	4206365	.	+	.	ID=GCA000153685_03957_gene;locus_tag=GCA000153685_03957;gene=lpqH
contig_1	Pyrodigal	CDS	4205886	4206365	.	+	0	ID=GCA000153685_03957;Name=lipoprotein LpqH;locus_tag=GCA000153685_03957;product=lipoprotein LpqH;Dbxref=GO:0005886,GO:0009274,GO:0009986,GO:0030430,GO:0042742,GO:0046789,GO:0051701,GO:0052553,GO:0097691;gene=lpqH;Parent=GCA000153685_03957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420544,RefSeq:WP_003420544.1,SO:0001217,UniParc:UPI0000124E1F,UniRef:UniRef100_P9WK61,UniRef:UniRef50_P9WK61,UniRef:UniRef90_P9WK61
contig_1	Pyrodigal	gene	4206421	4207857	.	-	.	ID=GCA000153685_03958_gene;locus_tag=GCA000153685_03958;gene=tcrY
contig_1	Pyrodigal	CDS	4206421	4207857	.	-	0	ID=GCA000153685_03958;Name=two-component system sensor histidine kinase TcrY;locus_tag=GCA000153685_03958;product=two-component system sensor histidine kinase TcrY;Dbxref=GO:0000155,GO:0000160,GO:0000287,GO:0005509,GO:0005524,GO:0005829,GO:0005886,GO:0042803;gene=tcrY;Parent=GCA000153685_03958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899682,SO:0001217,UniParc:UPI00012781BA,UniRef:UniRef100_A0A0H3LFP0,UniRef:UniRef50_O69729,UniRef:UniRef90_O69729;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	4207919	4208623	.	-	.	ID=GCA000153685_03959_gene;locus_tag=GCA000153685_03959;gene=tcrX
contig_1	Pyrodigal	CDS	4207919	4208623	.	-	0	ID=GCA000153685_03959;Name=two-component system response regulator TcrX;locus_tag=GCA000153685_03959;product=two-component system response regulator TcrX;Dbxref=GO:0000156,GO:0000160,GO:0000976,GO:0005829,GO:0006355,GO:0010106,GO:0032993;gene=tcrX;Parent=GCA000153685_03959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420552,COG:COG0745,COG:TK,RefSeq:WP_003420552.1,SO:0001217,UniParc:UPI0000165383,UniRef:UniRef100_O69730,UniRef:UniRef50_O69730,UniRef:UniRef90_O69730
contig_1	Pyrodigal	gene	4208997	4209821	.	+	.	ID=GCA000153685_03960_gene;locus_tag=GCA000153685_03960
contig_1	Pyrodigal	CDS	4208997	4209821	.	+	0	ID=GCA000153685_03960;Name=putative protein Rv3766;locus_tag=GCA000153685_03960;product=putative protein Rv3766;Parent=GCA000153685_03960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912342.1,SO:0001217,UniParc:UPI000169A25D,UniRef:UniRef100_O69731,UniRef:UniRef50_O69731,UniRef:UniRef90_O69731
contig_1	Pyrodigal	gene	4209835	4210779	.	-	.	ID=GCA000153685_03961_gene;locus_tag=GCA000153685_03961
contig_1	Pyrodigal	CDS	4209835	4210779	.	-	0	ID=GCA000153685_03961;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb3793c;locus_tag=GCA000153685_03961;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb3793c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_03961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420557.1,SO:0001217,UniParc:UPI00000D1125,UniRef:UniRef100_P9WFH5,UniRef:UniRef50_P9WFH5,UniRef:UniRef90_P9WFH5;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	4210909	4211268	.	+	.	ID=GCA000153685_03962_gene;locus_tag=GCA000153685_03962
contig_1	Pyrodigal	CDS	4210909	4211268	.	+	0	ID=GCA000153685_03962;Name=SnoaL-like domain-containing protein;locus_tag=GCA000153685_03962;product=SnoaL-like domain-containing protein;Parent=GCA000153685_03962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420560.1,SO:0001217,UniParc:UPI00000D121A,UniRef:UniRef100_P72035,UniRef:UniRef50_P72035,UniRef:UniRef90_P72035
contig_1	Pyrodigal	gene	4211454	4211726	.	+	.	ID=GCA000153685_03963_gene;locus_tag=GCA000153685_03963
contig_1	Pyrodigal	CDS	4211454	4211726	.	+	0	ID=GCA000153685_03963;Name=DUF5798 domain-containing protein;locus_tag=GCA000153685_03963;product=DUF5798 domain-containing protein;Parent=GCA000153685_03963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420563.1,SO:0001217,UniParc:UPI00000CA929,UniRef:UniRef100_P72036,UniRef:UniRef50_A0A542DJI5,UniRef:UniRef90_P72036
contig_1	Pyrodigal	gene	4212039	4212614	.	-	.	ID=GCA000153685_03964_gene;locus_tag=GCA000153685_03964
contig_1	Pyrodigal	CDS	4212039	4212614	.	-	0	ID=GCA000153685_03964;Name=hypothetical protein;locus_tag=GCA000153685_03964;product=hypothetical protein;Parent=GCA000153685_03964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899685.1,SO:0001217,UniParc:UPI00000D1229,UniRef:UniRef100_L7N5E2,UniRef:UniRef50_L7N5E2,UniRef:UniRef90_L7N5E2
contig_1	Pyrodigal	gene	4212720	4212902	.	-	.	ID=GCA000153685_03965_gene;locus_tag=GCA000153685_03965
contig_1	Pyrodigal	CDS	4212720	4212902	.	-	0	ID=GCA000153685_03965;Name=a transposase;locus_tag=GCA000153685_03965;product=a transposase;Parent=GCA000153685_03965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2DCE,UniRef:UniRef100_A5U998,UniRef:UniRef50_A5U998,UniRef:UniRef90_A5U998
contig_1	Pyrodigal	gene	4212917	4213108	.	-	.	ID=GCA000153685_03966_gene;locus_tag=GCA000153685_03966
contig_1	Pyrodigal	CDS	4212917	4213108	.	-	0	ID=GCA000153685_03966;Name=Transposase;locus_tag=GCA000153685_03966;product=Transposase;Parent=GCA000153685_03966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2DCF,UniRef:UniRef100_A5U999,UniRef:UniRef50_R4M0Z4,UniRef:UniRef90_R4M0Z4
contig_1	Pyrodigal	gene	4213243	4213569	.	-	.	ID=GCA000153685_03967_gene;locus_tag=GCA000153685_03967
contig_1	Pyrodigal	CDS	4213243	4213569	.	-	0	ID=GCA000153685_03967;Name=hypothetical protein;locus_tag=GCA000153685_03967;product=hypothetical protein;Parent=GCA000153685_03967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420573.1,SO:0001217,UniParc:UPI00000D1209,UniRef:UniRef100_P72038,UniRef:UniRef50_P72038,UniRef:UniRef90_P72038
contig_1	tRNAscan-SE	gene	4213704	4213776	.	-	.	ID=GCA000153685_03968_gene;locus_tag=GCA000153685_03968;gene=trnR
contig_1	tRNAscan-SE	tRNA	4213704	4213776	.	-	.	ID=GCA000153685_03968;Name=tRNA-Arg(acg);locus_tag=GCA000153685_03968;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000153685_03968_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	4213807	4213895	.	-	.	ID=GCA000153685_03969_gene;locus_tag=GCA000153685_03969;gene=trnS
contig_1	tRNAscan-SE	tRNA	4213807	4213895	.	-	.	ID=GCA000153685_03969;Name=tRNA-Ser(gct);locus_tag=GCA000153685_03969;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000153685_03969_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	4213973	4215034	.	+	.	ID=GCA000153685_03970_gene;locus_tag=GCA000153685_03970;gene=hisC
contig_1	Pyrodigal	CDS	4213973	4215034	.	+	0	ID=GCA000153685_03970;Name=histidinol-phosphate transaminase;locus_tag=GCA000153685_03970;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170,GO:0080130;gene=hisC;Parent=GCA000153685_03970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001197243,BlastRules:WP_001264013,BlastRules:WP_003899686,KEGG:K00817,RefSeq:WP_003899686.1,SO:0001217,UniParc:UPI000012C70D,UniRef:UniRef100_P9WML5,UniRef:UniRef50_P9WML5,UniRef:UniRef90_P9WML5;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	4215080	4215577	.	-	.	ID=GCA000153685_03971_gene;locus_tag=GCA000153685_03971
contig_1	Pyrodigal	CDS	4215080	4215577	.	-	0	ID=GCA000153685_03971;Name=TIGR03086 family protein;locus_tag=GCA000153685_03971;product=TIGR03086 family protein;Parent=GCA000153685_03971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004BA31B4,UniRef:UniRef100_A0A0E8B9G9,UniRef:UniRef50_Q745P4,UniRef:UniRef90_A0A0H3LKC1
contig_1	Pyrodigal	gene	4215628	4216512	.	+	.	ID=GCA000153685_03972_gene;locus_tag=GCA000153685_03972
contig_1	Pyrodigal	CDS	4215628	4216512	.	+	0	ID=GCA000153685_03972;Name=crotonase/enoyl-CoA hydratase family protein;locus_tag=GCA000153685_03972;product=crotonase/enoyl-CoA hydratase family protein;Parent=GCA000153685_03972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E628A5,UniRef:UniRef100_P75019,UniRef:UniRef50_A0A143QCR6,UniRef:UniRef90_A0A654TEX4
contig_1	Pyrodigal	gene	4216524	4217771	.	+	.	ID=GCA000153685_03973_gene;locus_tag=GCA000153685_03973;gene=lipE
contig_1	Pyrodigal	CDS	4216524	4217771	.	+	0	ID=GCA000153685_03973;Name=lipase LipE;locus_tag=GCA000153685_03973;product=lipase LipE;gene=lipE;Parent=GCA000153685_03973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420590.1,SO:0001217,UniParc:UPI00000D5F12,UniRef:UniRef100_A5U9A4,UniRef:UniRef50_A0A655BGQ6,UniRef:UniRef90_A0A655BGQ6;ec_number=3.1.1.1
contig_1	tRNAscan-SE	gene	4219420	4219506	.	-	.	ID=GCA000153685_03974_gene;locus_tag=GCA000153685_03974;gene=trnS
contig_1	tRNAscan-SE	tRNA	4219420	4219506	.	-	.	ID=GCA000153685_03974;Name=tRNA-Ser(tga);locus_tag=GCA000153685_03974;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000153685_03974_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	4219542	4220519	.	+	.	ID=GCA000153685_03975_gene;locus_tag=GCA000153685_03975
contig_1	Pyrodigal	CDS	4219542	4220519	.	+	0	ID=GCA000153685_03975;Name=Oxidoreductase;locus_tag=GCA000153685_03975;product=Oxidoreductase;Parent=GCA000153685_03975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917958.1,SO:0001217,UniParc:UPI00022F303D,UniRef:UniRef100_A0A0E8W9W6,UniRef:UniRef50_A0A2Z3YQT9,UniRef:UniRef90_A0A0E8W9W6
contig_1	Pyrodigal	gene	4220538	4221734	.	-	.	ID=GCA000153685_03976_gene;locus_tag=GCA000153685_03976
contig_1	Pyrodigal	CDS	4220538	4221734	.	-	0	ID=GCA000153685_03976;Name=putative protein Rv3778c;locus_tag=GCA000153685_03976;product=putative protein Rv3778c;Dbxref=GO:0005886,GO:0009274;Parent=GCA000153685_03976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420595.1,SO:0001217,UniParc:UPI00000D1202,UniRef:UniRef100_P9WQ67,UniRef:UniRef50_P9WQ67,UniRef:UniRef90_P9WQ67
contig_1	Pyrodigal	gene	4221824	4223824	.	+	.	ID=GCA000153685_03977_gene;locus_tag=GCA000153685_03977
contig_1	Pyrodigal	CDS	4221824	4223824	.	+	0	ID=GCA000153685_03977;Name=Transmembrane protein alanine and leucine rich;locus_tag=GCA000153685_03977;product=Transmembrane protein alanine and leucine rich;Parent=GCA000153685_03977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22902,RefSeq:WP_003420597.1,SO:0001217,UniParc:UPI00000CA92A,UniRef:UniRef100_A5U9A8,UniRef:UniRef50_A0A1S1JUE4,UniRef:UniRef90_Q8VIT7
contig_1	Pyrodigal	gene	4223840	4224364	.	+	.	ID=GCA000153685_03978_gene;locus_tag=GCA000153685_03978;gene=bpa
contig_1	Pyrodigal	CDS	4223840	4224364	.	+	0	ID=GCA000153685_03978;Name=proteasome activator protein Bpa;locus_tag=GCA000153685_03978;product=proteasome activator protein Bpa;Dbxref=GO:0005886,GO:0009274,GO:0022624,GO:0051260,GO:0070628,GO:1901800;gene=bpa;Parent=GCA000153685_03978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900754,SO:0001217,UniParc:UPI0000139454,UniRef:UniRef100_P9WKX3,UniRef:UniRef50_P9WKX3,UniRef:UniRef90_P9WKX3
contig_1	Pyrodigal	gene	4224368	4225189	.	+	.	ID=GCA000153685_03979_gene;locus_tag=GCA000153685_03979;gene=tagH
contig_1	Pyrodigal	CDS	4224368	4225189	.	+	0	ID=GCA000153685_03979;Name=Teichoic acids export ATP-binding protein TagH;locus_tag=GCA000153685_03979;product=Teichoic acids export ATP-binding protein TagH;gene=tagH;Parent=GCA000153685_03979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420603.1,SO:0001217,UniParc:UPI00000D11F1,UniRef:UniRef100_A5U9B0,UniRef:UniRef50_A0A143QES4,UniRef:UniRef90_A0A7Z7IQG8
contig_1	Pyrodigal	gene	4225186	4226100	.	+	.	ID=GCA000153685_03980_gene;locus_tag=GCA000153685_03980;gene=glfT1
contig_1	Pyrodigal	CDS	4225186	4226100	.	+	0	ID=GCA000153685_03980;Name=galactofuranosyl transferase GlfT1;locus_tag=GCA000153685_03980;product=galactofuranosyl transferase GlfT1;Dbxref=GO:0005576,GO:0005886,GO:0008378,GO:0016740,GO:0016757,GO:0044038,GO:0045227,GO:0071555;gene=glfT1;Parent=GCA000153685_03980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420606,KEGG:K16649,RefSeq:WP_003420606.1,SO:0001217,UniParc:UPI00000D1215,UniRef:UniRef100_P9WMX3,UniRef:UniRef50_P9WMX3,UniRef:UniRef90_P9WMX3;ec_number=2.4.1.287
contig_1	Pyrodigal	gene	4226097	4226939	.	+	.	ID=GCA000153685_03981_gene;locus_tag=GCA000153685_03981
contig_1	Pyrodigal	CDS	4226097	4226939	.	+	0	ID=GCA000153685_03981;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000153685_03981;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000153685_03981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420610.1,SO:0001217,UniParc:UPI00000D1237,UniRef:UniRef100_A5U9B2,UniRef:UniRef50_A0A498QZW6,UniRef:UniRef90_A0A498QZW6
contig_1	Pyrodigal	gene	4227095	4228075	.	+	.	ID=GCA000153685_03982_gene;locus_tag=GCA000153685_03982
contig_1	Pyrodigal	CDS	4227095	4228075	.	+	0	ID=GCA000153685_03982;Name=putative dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA000153685_03982;product=putative dTDP-glucose 4%2C6-dehydratase;Parent=GCA000153685_03982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420612.1,SO:0001217,UniParc:UPI00000CA92B,UniRef:UniRef100_P72050,UniRef:UniRef50_P72050,UniRef:UniRef90_P72050
contig_1	Pyrodigal	gene	4228159	4229232	.	+	.	ID=GCA000153685_03983_gene;locus_tag=GCA000153685_03983
contig_1	Pyrodigal	CDS	4228159	4229232	.	+	0	ID=GCA000153685_03983;Name=putative protein Rv3785;locus_tag=GCA000153685_03983;product=putative protein Rv3785;Dbxref=GO:0005829;Parent=GCA000153685_03983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420615.1,SO:0001217,UniParc:UPI0000139455,UniRef:UniRef100_P9WKX1,UniRef:UniRef50_P9WKX1,UniRef:UniRef90_P9WKX1
contig_1	Pyrodigal	gene	4229213	4230436	.	-	.	ID=GCA000153685_03984_gene;locus_tag=GCA000153685_03984
contig_1	Pyrodigal	CDS	4229213	4230436	.	-	0	ID=GCA000153685_03984;Name=putative protein Rv3786c;locus_tag=GCA000153685_03984;product=putative protein Rv3786c;Dbxref=GO:0004222,GO:0005886,GO:0009274;Parent=GCA000153685_03984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420618.1,SO:0001217,UniParc:UPI0000139456,UniRef:UniRef100_P9WKW9,UniRef:UniRef50_P9WKW9,UniRef:UniRef90_P9WKW9
contig_1	Pyrodigal	gene	4230449	4231375	.	-	.	ID=GCA000153685_03985_gene;locus_tag=GCA000153685_03985
contig_1	Pyrodigal	CDS	4230449	4231375	.	-	0	ID=GCA000153685_03985;Name=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb3816c;locus_tag=GCA000153685_03985;product=Putative S-adenosyl-L-methionine-dependent methyltransferase Mb3816c;Dbxref=GO:0008168,GO:0032259;Parent=GCA000153685_03985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420620.1,SO:0001217,UniParc:UPI00000D120F,UniRef:UniRef100_P9WFH3,UniRef:UniRef50_Q73S85,UniRef:UniRef90_P9WFH3;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	4231619	4232104	.	+	.	ID=GCA000153685_03986_gene;locus_tag=GCA000153685_03986
contig_1	Pyrodigal	CDS	4231619	4232104	.	+	0	ID=GCA000153685_03986;Name=putative protein Rv3788;locus_tag=GCA000153685_03986;product=putative protein Rv3788;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;Parent=GCA000153685_03986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420624.1,SO:0001217,UniParc:UPI0000139457,UniRef:UniRef100_P9WKW7,UniRef:UniRef50_P9WKW7,UniRef:UniRef90_P9WKW7
contig_1	Pyrodigal	gene	4232150	4232578	.	+	.	ID=GCA000153685_03987_gene;locus_tag=GCA000153685_03987
contig_1	Pyrodigal	CDS	4232150	4232578	.	+	0	ID=GCA000153685_03987;Name=Arabinogalactan biosynthesis recruiting protein Rv3789;locus_tag=GCA000153685_03987;product=Arabinogalactan biosynthesis recruiting protein Rv3789;Dbxref=GO:0005886,GO:0045227,GO:0071555;Parent=GCA000153685_03987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001651E7,UniRef:UniRef100_P9WMS9,UniRef:UniRef50_P9WMS9,UniRef:UniRef90_P9WMS9
contig_1	Pyrodigal	gene	4232618	4234003	.	+	.	ID=GCA000153685_03988_gene;locus_tag=GCA000153685_03988;gene=dprE1
contig_1	Pyrodigal	CDS	4232618	4234003	.	+	0	ID=GCA000153685_03988;Name=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;locus_tag=GCA000153685_03988;product=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;Dbxref=GO:0003885,GO:0005886,GO:0016491,GO:0035884,GO:0042597,GO:0045227,GO:0046677,GO:0070592,GO:0071555,GO:0071949;gene=dprE1;Parent=GCA000153685_03988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420630,KEGG:K16653,RefSeq:WP_003420630.1,SO:0001217,UniParc:UPI00000CCC18,UniRef:UniRef100_P9WJF1,UniRef:UniRef50_P9WJF1,UniRef:UniRef90_P9WJF1;ec_number=1.1.98.3
contig_1	Pyrodigal	gene	4234004	4234768	.	+	.	ID=GCA000153685_03989_gene;locus_tag=GCA000153685_03989;gene=dprE2
contig_1	Pyrodigal	CDS	4234004	4234768	.	+	0	ID=GCA000153685_03989;Name=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;locus_tag=GCA000153685_03989;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;Dbxref=GO:0005886,GO:0016491,GO:0035884,GO:0042597,GO:0045227,GO:0070592,GO:0071555;gene=dprE2;Parent=GCA000153685_03989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420632.1,SO:0001217,UniParc:UPI000013945A,UniRef:UniRef100_P9WGS9,UniRef:UniRef50_P9WGS9,UniRef:UniRef90_P9WGS9;ec_number=1.1.1.333
contig_1	Pyrodigal	gene	4234810	4236702	.	+	.	ID=GCA000153685_03990_gene;locus_tag=GCA000153685_03990;gene=aftA
contig_1	Pyrodigal	CDS	4234810	4236702	.	+	0	ID=GCA000153685_03990;Name=galactan 5-O-arabinofuranosyltransferase;locus_tag=GCA000153685_03990;product=galactan 5-O-arabinofuranosyltransferase;Dbxref=GO:0005886,GO:0009274,GO:0016757,GO:0035250,GO:0044038,GO:0045227,GO:0071555,GO:0071769;gene=aftA;Parent=GCA000153685_03990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899694,KEGG:K13686,SO:0001217,UniParc:UPI000418E82C,UniRef:UniRef100_A0A0E9AJ59,UniRef:UniRef50_P9WN03,UniRef:UniRef90_P9WN03;ec_number=2.4.2.46
contig_1	Pyrodigal	gene	4236702	4239986	.	+	.	ID=GCA000153685_03991_gene;locus_tag=GCA000153685_03991;gene=embC
contig_1	Pyrodigal	CDS	4236702	4239986	.	+	0	ID=GCA000153685_03991;Name=arabinosyltransferase EmbC;locus_tag=GCA000153685_03991;product=arabinosyltransferase EmbC;Dbxref=GO:0005886,GO:0052636,GO:0071555,GO:0071766;gene=embC;Parent=GCA000153685_03991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901726,RefSeq:WP_003917841.1,SO:0001217,UniParc:UPI0001FB6B5B,UniRef:UniRef100_P9WNL4,UniRef:UniRef50_P9WNL5,UniRef:UniRef90_P9WNL5;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	4240072	4243356	.	+	.	ID=GCA000153685_03992_gene;locus_tag=GCA000153685_03992;gene=embA
contig_1	Pyrodigal	CDS	4240072	4243356	.	+	0	ID=GCA000153685_03992;Name=arabinosyltransferase EmbA;locus_tag=GCA000153685_03992;product=arabinosyltransferase EmbA;Dbxref=GO:0005829,GO:0005886,GO:0046677,GO:0052636,GO:0071555,GO:0071766;gene=embA;Parent=GCA000153685_03992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899696,KEGG:K11385,RefSeq:WP_003899696.1,SO:0001217,UniParc:UPI0000129E94,UniRef:UniRef100_P9WNL9,UniRef:UniRef50_P9WNL9,UniRef:UniRef90_P9WNL9;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	4243353	4246649	.	+	.	ID=GCA000153685_03993_gene;locus_tag=GCA000153685_03993;gene=embB
contig_1	Pyrodigal	CDS	4243353	4246649	.	+	0	ID=GCA000153685_03993;Name=arabinosyltransferase EmbB;locus_tag=GCA000153685_03993;product=arabinosyltransferase EmbB;Dbxref=GO:0005886,GO:0009274,GO:0046677,GO:0052636,GO:0071555,GO:0071766;gene=embB;Parent=GCA000153685_03993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901728,RefSeq:WP_003901728.1,SO:0001217,UniParc:UPI0000129E98,UniRef:UniRef100_P9WNL7,UniRef:UniRef50_P9WNL7,UniRef:UniRef90_P9WNL7;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	4246717	4247844	.	+	.	ID=GCA000153685_03994_gene;locus_tag=GCA000153685_03994
contig_1	Pyrodigal	CDS	4246717	4247844	.	+	0	ID=GCA000153685_03994;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000153685_03994;product=Metallo-beta-lactamase domain-containing protein;Parent=GCA000153685_03994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00784,RefSeq:WP_003420646.1,SO:0001217,UniParc:UPI00000D5048,UniRef:UniRef100_P72062,UniRef:UniRef50_A0A7I7WJM2,UniRef:UniRef90_Q7D4V2;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	4247924	4249705	.	+	.	ID=GCA000153685_03995_gene;locus_tag=GCA000153685_03995
contig_1	Pyrodigal	CDS	4247924	4249705	.	+	0	ID=GCA000153685_03995;Name=Acyl-CoA dehydrogenase FadE35;locus_tag=GCA000153685_03995;product=Acyl-CoA dehydrogenase FadE35;Parent=GCA000153685_03995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900757.1,SO:0001217,UniParc:UPI00000D5F80,UniRef:UniRef100_A5U9C6,UniRef:UniRef50_A0A1I5FEA0,UniRef:UniRef90_A5U9C6
contig_1	Pyrodigal	gene	4249832	4251166	.	+	.	ID=GCA000153685_03996_gene;locus_tag=GCA000153685_03996;gene=tnp
contig_1	Pyrodigal	CDS	4249832	4251166	.	+	0	ID=GCA000153685_03996;Name=ISL3 family IS1557 transposase;locus_tag=GCA000153685_03996;product=ISL3 family IS1557 transposase;Dbxref=GO:0003677,GO:0004803,GO:0005886,GO:0006310,GO:0009274,GO:0032196;gene=tnp;Parent=GCA000153685_03996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1557,KEGG:K07485,RefSeq:WP_003900758.1,SO:0001217,UniParc:UPI000013772B,UniRef:UniRef100_P9WKH7,UniRef:UniRef50_P9WKH7,UniRef:UniRef90_P9WKH7
contig_1	Pyrodigal	gene	4251219	4252787	.	-	.	ID=GCA000153685_03997_gene;locus_tag=GCA000153685_03997;gene=accD4
contig_1	Pyrodigal	CDS	4251219	4252787	.	-	0	ID=GCA000153685_03997;Name=Biotin-dependent long chain acyl-coenzyme A carboxylase beta4 subunit;locus_tag=GCA000153685_03997;product=Biotin-dependent long chain acyl-coenzyme A carboxylase beta4 subunit;Dbxref=GO:0003989,GO:0004658,GO:0005886,GO:0009274,GO:0009317,GO:0015977,GO:0016740,GO:0071769;gene=accD4;Parent=GCA000153685_03997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4799,COG:I,KEGG:K27093,RefSeq:WP_003420767.1,SO:0001217,UniParc:UPI00000D2DD3,UniRef:UniRef100_O53578,UniRef:UniRef50_O53578,UniRef:UniRef90_O53578;ec_number=2.1.3.-
contig_1	Pyrodigal	gene	4252784	4257985	.	-	.	ID=GCA000153685_03998_gene;locus_tag=GCA000153685_03998;gene=pks13
contig_1	Pyrodigal	CDS	4252784	4257985	.	-	0	ID=GCA000153685_03998;Name=polyketide synthase Pks13;locus_tag=GCA000153685_03998;product=polyketide synthase Pks13;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0006633,GO:0031177,GO:0071768,GO:0071770;gene=pks13;Parent=GCA000153685_03998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031738780,RefSeq:WP_003902557.1,SO:0001217,UniParc:UPI00000D1172,UniRef:UniRef100_I6X8D2,UniRef:UniRef50_I6X8D2,UniRef:UniRef90_I6X8D2;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	4257992	4259881	.	-	.	ID=GCA000153685_03999_gene;locus_tag=GCA000153685_03999;gene=fadD32
contig_1	Pyrodigal	CDS	4257992	4259881	.	-	0	ID=GCA000153685_03999;Name=long-chain-fatty-acid--AMP ligase FadD32;locus_tag=GCA000153685_03999;product=long-chain-fatty-acid--AMP ligase FadD32;Dbxref=GO:0005524,GO:0005886,GO:0006633,GO:0008610,GO:0008922,GO:0009274,GO:0016874,GO:0070566,GO:0071766,GO:0071768,GO:0071769;gene=fadD32;Parent=GCA000153685_03999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912356,COG:COG0318,COG:I,KEGG:K12428,RefSeq:WP_003912356.1,SO:0001217,UniParc:UPI00005EE8CB,UniRef:UniRef100_O53580,UniRef:UniRef50_O53580,UniRef:UniRef90_O53580;ec_number=6.2.1.20
contig_1	Pyrodigal	gene	4260194	4261204	.	-	.	ID=GCA000153685_04000_gene;locus_tag=GCA000153685_04000;gene=cut6
contig_1	Pyrodigal	CDS	4260194	4261204	.	-	0	ID=GCA000153685_04000;Name=phospholipase;locus_tag=GCA000153685_04000;product=phospholipase;Dbxref=GO:0005576,GO:0005886,GO:0008970,GO:0009274,GO:0016042,GO:0016298,GO:0047617,GO:0106435;gene=cut6;Parent=GCA000153685_04000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420779,RefSeq:WP_003420779.1,SO:0001217,UniParc:UPI00000D11D1,UniRef:UniRef100_O53581,UniRef:UniRef50_O53581,UniRef:UniRef90_O53581;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	4261402	4262301	.	-	.	ID=GCA000153685_04001_gene;locus_tag=GCA000153685_04001;gene=fbpD
contig_1	Pyrodigal	CDS	4261402	4262301	.	-	0	ID=GCA000153685_04001;Name=MPT51/MPB51 antigen;locus_tag=GCA000153685_04001;product=MPT51/MPB51 antigen;Dbxref=GO:0001968,GO:0005576,GO:0016747,GO:0035375;gene=fbpD;Parent=GCA000153685_04001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420783.1,SO:0001217,UniParc:UPI000012F437,UniRef:UniRef100_P9WQN7,UniRef:UniRef50_P9WQN7,UniRef:UniRef90_P9WQN7,VFDB:VFC0001,VFDB:VFG001810
contig_1	Pyrodigal	gene	4262481	4263497	.	-	.	ID=GCA000153685_04002_gene;locus_tag=GCA000153685_04002;gene=fbpA
contig_1	Pyrodigal	CDS	4262481	4263497	.	-	0	ID=GCA000153685_04002;Name=diacylglycerol acyltransferase/mycolyltransferase Ag85A;locus_tag=GCA000153685_04002;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;Dbxref=GO:0004144,GO:0005576,GO:0005737,GO:0005886,GO:0009274,GO:0016747,GO:0035375,GO:0050348;gene=fbpA;Parent=GCA000153685_04002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900759,RefSeq:WP_003900759.1,SO:0001217,UniParc:UPI000002CE66,UniRef:UniRef100_P9WQP3,UniRef:UniRef50_P9WQP3,UniRef:UniRef90_P9WQP3;ec_number=2.3.1.20
contig_1	Pyrodigal	gene	4263792	4265789	.	-	.	ID=GCA000153685_04003_gene;locus_tag=GCA000153685_04003;gene=aftB
contig_1	Pyrodigal	CDS	4263792	4265789	.	-	0	ID=GCA000153685_04003;Name=terminal beta-(1->2)-arabinofuranosyltransferase;locus_tag=GCA000153685_04003;product=terminal beta-(1->2)-arabinofuranosyltransferase;Dbxref=GO:0016020,GO:0016757,GO:0045227,GO:0071555;gene=aftB;Parent=GCA000153685_04003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420786,BlastRules:WP_009936680,KEGG:K13687,RefSeq:WP_009936680.1,SO:0001217,UniParc:UPI00005EE8CE,UniRef:UniRef100_O53582,UniRef:UniRef50_O53582,UniRef:UniRef90_O53582;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	4265764	4266672	.	-	.	ID=GCA000153685_04004_gene;locus_tag=GCA000153685_04004
contig_1	Pyrodigal	CDS	4265764	4266672	.	-	0	ID=GCA000153685_04004;Name=decaprenyl-phosphate phosphoribosyltransferase;locus_tag=GCA000153685_04004;product=decaprenyl-phosphate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0005886,GO:0009247,GO:0016740,GO:0016765,GO:0045227,GO:0052636,GO:0071555;Parent=GCA000153685_04004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14136,RefSeq:WP_003899704.1,SO:0001217,UniParc:UPI00000D110A,UniRef:UniRef100_P9WFR5,UniRef:UniRef50_P9WFR5,UniRef:UniRef90_P9WFR5;ec_number=2.4.2.45
contig_1	Pyrodigal	gene	4266679	4267212	.	-	.	ID=GCA000153685_04005_gene;locus_tag=GCA000153685_04005
contig_1	Pyrodigal	CDS	4266679	4267212	.	-	0	ID=GCA000153685_04005;Name=Putative decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c;locus_tag=GCA000153685_04005;product=Putative decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c;Dbxref=GO:0005886,GO:0008610,GO:0016787,GO:0045227,GO:0071555,GO:1901137;Parent=GCA000153685_04005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27842,RefSeq:WP_003899705.1,SO:0001217,UniParc:UPI00005EE8CF,UniRef:UniRef100_P9WI53,UniRef:UniRef50_A0R627,UniRef:UniRef90_P9WI53;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	4267205	4269118	.	-	.	ID=GCA000153685_04006_gene;locus_tag=GCA000153685_04006;gene=glfT2
contig_1	Pyrodigal	CDS	4267205	4269118	.	-	0	ID=GCA000153685_04006;Name=galactofuranosyl transferase GlfT2;locus_tag=GCA000153685_04006;product=galactofuranosyl transferase GlfT2;Dbxref=GO:0005829,GO:0005886,GO:0008921,GO:0009103,GO:0016740,GO:0016757,GO:0035250,GO:0035496,GO:0044038,GO:0045227,GO:0046872,GO:0052573,GO:0070592,GO:0071555,GO:0071769;gene=glfT2;Parent=GCA000153685_04006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900761,RefSeq:WP_003900761.1,SO:0001217,UniParc:UPI00000CCB84,UniRef:UniRef100_O53585,UniRef:UniRef50_O53585,UniRef:UniRef90_O53585;ec_number=2.4.1.288
contig_1	Pyrodigal	gene	4269115	4270314	.	-	.	ID=GCA000153685_04007_gene;locus_tag=GCA000153685_04007;gene=glf
contig_1	Pyrodigal	CDS	4269115	4270314	.	-	0	ID=GCA000153685_04007;Name=UDP-galactopyranose mutase;locus_tag=GCA000153685_04007;product=UDP-galactopyranose mutase;Dbxref=GO:0005829,GO:0005886,GO:0008767,GO:0009273,GO:0009274,GO:0045227,GO:0050660,GO:0071555,GO:0071766;gene=glf;Parent=GCA000153685_04007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0562,COG:M,KEGG:K01854,RefSeq:WP_003420798.1,SO:0001217,UniParc:UPI00000D0FC1,UniRef:UniRef100_P9WIQ1,UniRef:UniRef50_P9WIQ1,UniRef:UniRef90_P9WIQ1;ec_number=5.4.99.9
contig_1	Pyrodigal	gene	4270578	4271432	.	+	.	ID=GCA000153685_04008_gene;locus_tag=GCA000153685_04008;gene=erp
contig_1	Pyrodigal	CDS	4270578	4271432	.	+	0	ID=GCA000153685_04008;Name=exported repetitive protein precursor Erp;locus_tag=GCA000153685_04008;product=exported repetitive protein precursor Erp;Dbxref=GO:0005886;gene=erp;Parent=GCA000153685_04008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420801.1,SO:0001217,UniParc:UPI000012A17C,UniRef:UniRef100_P9WIQ7,UniRef:UniRef50_P9WIQ7,UniRef:UniRef90_P9WIQ7,VFDB:VFC0346,VFDB:VFG001420
contig_1	Pyrodigal	gene	4271595	4273256	.	+	.	ID=GCA000153685_04009_gene;locus_tag=GCA000153685_04009
contig_1	Pyrodigal	CDS	4271595	4273256	.	+	0	ID=GCA000153685_04009;Name=Peptidoglycan recognition protein family domain-containing protein;locus_tag=GCA000153685_04009;product=Peptidoglycan recognition protein family domain-containing protein;Parent=GCA000153685_04009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003912357.1,SO:0001217,UniParc:UPI00005EE8D1,UniRef:UniRef100_Q79F96,UniRef:UniRef50_A0A7I7MTU9,UniRef:UniRef90_Q79F96
contig_1	Pyrodigal	gene	4273410	4274924	.	+	.	ID=GCA000153685_04010_gene;locus_tag=GCA000153685_04010;gene=pE_PGRS62
contig_1	Pyrodigal	CDS	4273410	4274924	.	+	0	ID=GCA000153685_04010;Name=PE-PGRS family protein PE_PGRS62;locus_tag=GCA000153685_04010;product=PE-PGRS family protein PE_PGRS62;Dbxref=GO:0005576;gene=pE_PGRS62;Parent=GCA000153685_04010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420809.1,SO:0001217,UniParc:UPI00000D6046,UniRef:UniRef100_L7N680,UniRef:UniRef50_L7N680,UniRef:UniRef90_L7N680
contig_1	Pyrodigal	gene	4274921	4275073	.	-	.	ID=GCA000153685_04011_gene;locus_tag=GCA000153685_04011;gene=pilT
contig_1	Pyrodigal	CDS	4274921	4275073	.	-	0	ID=GCA000153685_04011;Name=Twitching motility protein PilT;locus_tag=GCA000153685_04011;product=Twitching motility protein PilT;gene=pilT;Parent=GCA000153685_04011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420812.1,SO:0001217,UniParc:UPI00000D2DD5,UniRef:UniRef100_A0A0H3LKG2,UniRef:UniRef50_R4MBQ0,UniRef:UniRef90_R4MBQ0
contig_1	Pyrodigal	gene	4275233	4276042	.	-	.	ID=GCA000153685_04012_gene;locus_tag=GCA000153685_04012
contig_1	Pyrodigal	CDS	4275233	4276042	.	-	0	ID=GCA000153685_04012;Name=HAD family hydrolase;locus_tag=GCA000153685_04012;product=HAD family hydrolase;Parent=GCA000153685_04012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21064,SO:0001217,UniParc:UPI00005EE8D2,UniRef:UniRef100_A0A0H3LGX7,UniRef:UniRef50_A0A3G8JQA5,UniRef:UniRef90_A0A0H3LGX7;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	4276069	4276854	.	-	.	ID=GCA000153685_04013_gene;locus_tag=GCA000153685_04013
contig_1	Pyrodigal	CDS	4276069	4276854	.	-	0	ID=GCA000153685_04013;Name=putative acyltransferase;locus_tag=GCA000153685_04013;product=putative acyltransferase;Parent=GCA000153685_04013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420820.1,SO:0001217,UniParc:UPI00000D5F6E,UniRef:UniRef100_O07809,UniRef:UniRef50_A0A447GL56,UniRef:UniRef90_O07809
contig_1	Pyrodigal	gene	4276872	4277627	.	-	.	ID=GCA000153685_04014_gene;locus_tag=GCA000153685_04014
contig_1	Pyrodigal	CDS	4276872	4277627	.	-	0	ID=GCA000153685_04014;Name=Acyltransferase;locus_tag=GCA000153685_04014;product=Acyltransferase;Parent=GCA000153685_04014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420824.1,SO:0001217,UniParc:UPI00000D5E5E,UniRef:UniRef100_O07808,UniRef:UniRef50_A0A447GL56,UniRef:UniRef90_A0A916P833
contig_1	Pyrodigal	gene	4277631	4278410	.	-	.	ID=GCA000153685_04015_gene;locus_tag=GCA000153685_04015
contig_1	Pyrodigal	CDS	4277631	4278410	.	-	0	ID=GCA000153685_04015;Name=putative acyltransferase;locus_tag=GCA000153685_04015;product=putative acyltransferase;Parent=GCA000153685_04015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420827.1,SO:0001217,UniParc:UPI00000D5FA1,UniRef:UniRef100_O07807,UniRef:UniRef50_A0A498QZW1,UniRef:UniRef90_O07807
contig_1	Pyrodigal	gene	4278486	4279241	.	+	.	ID=GCA000153685_04016_gene;locus_tag=GCA000153685_04016
contig_1	Pyrodigal	CDS	4278486	4279241	.	+	0	ID=GCA000153685_04016;Name=putative phosphotransferase;locus_tag=GCA000153685_04016;product=putative phosphotransferase;Parent=GCA000153685_04016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420830.1,SO:0001217,UniParc:UPI00000D5EDB,UniRef:UniRef100_O07806,UniRef:UniRef50_A0AAI8TSQ8,UniRef:UniRef90_O07806
contig_1	Pyrodigal	gene	4279288	4280838	.	+	.	ID=GCA000153685_04017_gene;locus_tag=GCA000153685_04017
contig_1	Pyrodigal	CDS	4279288	4280838	.	+	0	ID=GCA000153685_04017;Name=Putative Rieske 2Fe-2S iron-sulfur protein Rv3818;locus_tag=GCA000153685_04017;product=Putative Rieske 2Fe-2S iron-sulfur protein Rv3818;Dbxref=GO:0005737,GO:0016491,GO:0046872,GO:0051537;Parent=GCA000153685_04017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420837.1,SO:0001217,UniParc:UPI00000D5F31,UniRef:UniRef100_P9WH21,UniRef:UniRef50_P9WH21,UniRef:UniRef90_P9WH21;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	4280835	4281170	.	+	.	ID=GCA000153685_04018_gene;locus_tag=GCA000153685_04018
contig_1	Pyrodigal	CDS	4280835	4281170	.	+	0	ID=GCA000153685_04018;Name=Bacterial Pleckstrin-like y domain-containing protein;locus_tag=GCA000153685_04018;product=Bacterial Pleckstrin-like y domain-containing protein;Parent=GCA000153685_04018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420840.1,SO:0001217,UniParc:UPI00000CCB40,UniRef:UniRef100_O07804,UniRef:UniRef50_A0A0T1WDS5,UniRef:UniRef90_O07804
contig_1	Pyrodigal	gene	4281258	4282484	.	-	.	ID=GCA000153685_04019_gene;locus_tag=GCA000153685_04019;gene=papA2
contig_1	Pyrodigal	CDS	4281258	4282484	.	-	0	ID=GCA000153685_04019;Name=Trehalose-2-sulfate acyltransferase PapA2;locus_tag=GCA000153685_04019;product=Trehalose-2-sulfate acyltransferase PapA2;Dbxref=GO:0016747,GO:0046506,GO:0071555;gene=papA2;Parent=GCA000153685_04019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K22795,SO:0001217,UniParc:UPI00005EE8D3,UniRef:UniRef100_P9WIK7,UniRef:UniRef50_P9WIK5,UniRef:UniRef90_P9WIK7;ec_number=2.3.1.288
contig_1	Pyrodigal	gene	4282728	4283525	.	+	.	ID=GCA000153685_04020_gene;locus_tag=GCA000153685_04020;gene=sap
contig_1	Pyrodigal	CDS	4282728	4283525	.	+	0	ID=GCA000153685_04020;Name=Sulfolipid-1 exporter Sap;locus_tag=GCA000153685_04020;product=Sulfolipid-1 exporter Sap;Dbxref=GO:0005886,GO:0006869,GO:0071555;gene=sap;Parent=GCA000153685_04020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005295D8,UniRef:UniRef100_O07802,UniRef:UniRef50_O07802,UniRef:UniRef90_O07802
contig_1	Pyrodigal	gene	4283560	4284774	.	+	.	ID=GCA000153685_04021_gene;locus_tag=GCA000153685_04021;gene=chp1
contig_1	Pyrodigal	CDS	4283560	4284774	.	+	0	ID=GCA000153685_04021;Name=SL1278 acyltransferase Chp1;locus_tag=GCA000153685_04021;product=SL1278 acyltransferase Chp1;Dbxref=GO:0005886,GO:0006629,GO:0016746;gene=chp1;Parent=GCA000153685_04021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899709.1,SO:0001217,UniParc:UPI00000CCB3F,UniRef:UniRef100_O07801,UniRef:UniRef50_O07801,UniRef:UniRef90_O07801;ec_number=2.3.1.284
contig_1	Pyrodigal	gene	4285099	4288368	.	-	.	ID=GCA000153685_04022_gene;locus_tag=GCA000153685_04022;gene=mmpL8
contig_1	Pyrodigal	CDS	4285099	4288368	.	-	0	ID=GCA000153685_04022;Name=sulfolipid-1 RND transporter MmpL8;locus_tag=GCA000153685_04022;product=sulfolipid-1 RND transporter MmpL8;Dbxref=GO:0005829,GO:0005886,GO:0006869,GO:0009274,GO:0046506,GO:0071555;gene=mmpL8;Parent=GCA000153685_04022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899710,RefSeq:WP_003899710.1,SO:0001217,UniParc:UPI000012F274,UniRef:UniRef100_P9WJU5,UniRef:UniRef50_P9WJU5,UniRef:UniRef90_P9WJU5
contig_1	Pyrodigal	gene	4288478	4290013	.	-	.	ID=GCA000153685_04023_gene;locus_tag=GCA000153685_04023;gene=papA1
contig_1	Pyrodigal	CDS	4288478	4290013	.	-	0	ID=GCA000153685_04023;Name=acyltransferase PapA1;locus_tag=GCA000153685_04023;product=acyltransferase PapA1;Dbxref=GO:0016747,GO:0046506,GO:0071555;gene=papA1;Parent=GCA000153685_04023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899711,KEGG:K23415,RefSeq:WP_003899711.1,SO:0001217,UniParc:UPI00000CCB3E,UniRef:UniRef100_P9WIK9,UniRef:UniRef50_P9WIK9,UniRef:UniRef90_P9WIK9;ec_number=2.3.1.283
contig_1	Pyrodigal	gene	4290064	4296351	.	-	.	ID=GCA000153685_04024_gene;locus_tag=GCA000153685_04024;gene=pks2
contig_1	Pyrodigal	CDS	4290064	4296351	.	-	0	ID=GCA000153685_04024;Name=phthioceranic/hydroxyphthioceranic acid synthase;locus_tag=GCA000153685_04024;product=phthioceranic/hydroxyphthioceranic acid synthase;Dbxref=GO:0004312,GO:0004315,GO:0005737,GO:0005829,GO:0005886,GO:0006633,GO:0009274,GO:0010106,GO:0016491,GO:0031177,GO:0071770;gene=pks2;Parent=GCA000153685_04024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900763,SO:0001217,UniParc:UPI000169A318,UniRef:UniRef100_P9WQE9,UniRef:UniRef50_P9WQE9,UniRef:UniRef90_P9WQE9;ec_number=2.3.1.287
contig_1	Pyrodigal	gene	4296651	4298405	.	+	.	ID=GCA000153685_04025_gene;locus_tag=GCA000153685_04025;gene=fadD23
contig_1	Pyrodigal	CDS	4296651	4298405	.	+	0	ID=GCA000153685_04025;Name=long-chain-fatty-acid--CoA ligase FadD23;locus_tag=GCA000153685_04025;product=long-chain-fatty-acid--CoA ligase FadD23;Dbxref=GO:0005524,GO:0006633,GO:0016020,GO:0016874,GO:0046506,GO:0070566,GO:0071766;gene=fadD23;Parent=GCA000153685_04025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899713,KEGG:K12425,RefSeq:WP_003899713.1,SO:0001217,UniParc:UPI00000D5F72,UniRef:UniRef100_P9WQ47,UniRef:UniRef50_P9WQ47,UniRef:UniRef90_P9WQ47;ec_number=6.2.1.57
contig_1	Pyrodigal	gene	4298402	4299625	.	-	.	ID=GCA000153685_04026_gene;locus_tag=GCA000153685_04026;gene=tnpB
contig_1	Pyrodigal	CDS	4298402	4299625	.	-	0	ID=GCA000153685_04026;Name=IS607 family element RNA-guided endonuclease TnpB;locus_tag=GCA000153685_04026;product=IS607 family element RNA-guided endonuclease TnpB;gene=tnpB;Parent=GCA000153685_04026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8D9,UniRef:UniRef100_A0A1R3Y5M6,UniRef:UniRef50_A0A949N2N6,UniRef:UniRef90_O07796
contig_1	Pyrodigal	gene	4299625	4300206	.	-	.	ID=GCA000153685_04027_gene;locus_tag=GCA000153685_04027;gene=tnp
contig_1	Pyrodigal	CDS	4299625	4300206	.	-	0	ID=GCA000153685_04027;Name=IS607 family IS1537 transposase;locus_tag=GCA000153685_04027;product=IS607 family IS1537 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000153685_04027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:IS1537,RefSeq:WP_003420870.1,SO:0001217,UniParc:UPI00005EE8DA,UniRef:UniRef100_O07795,UniRef:UniRef50_A0A655HQ83,UniRef:UniRef90_O07795
contig_1	Pyrodigal	gene	4300237	4301847	.	-	.	ID=GCA000153685_04028_gene;locus_tag=GCA000153685_04028
contig_1	Pyrodigal	CDS	4300237	4301847	.	-	0	ID=GCA000153685_04028;Name=Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2;locus_tag=GCA000153685_04028;product=Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2;Parent=GCA000153685_04028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899716.1,SO:0001217,UniParc:UPI00000D5EEB,UniRef:UniRef100_O07794,UniRef:UniRef50_O07794,UniRef:UniRef90_O07794
contig_1	Pyrodigal	gene	4301895	4302524	.	-	.	ID=GCA000153685_04029_gene;locus_tag=GCA000153685_04029
contig_1	Pyrodigal	CDS	4301895	4302524	.	-	0	ID=GCA000153685_04029;Name=Transcriptional regulatory protein (Probably TetR-family);locus_tag=GCA000153685_04029;product=Transcriptional regulatory protein (Probably TetR-family);Parent=GCA000153685_04029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899717.1,SO:0001217,UniParc:UPI00000D6014,UniRef:UniRef100_P96248,UniRef:UniRef50_Q745K6,UniRef:UniRef90_P96248
contig_1	Pyrodigal	gene	4302596	4303078	.	+	.	ID=GCA000153685_04030_gene;locus_tag=GCA000153685_04030
contig_1	Pyrodigal	CDS	4302596	4303078	.	+	0	ID=GCA000153685_04030;Name=DUF2834 domain-containing protein;locus_tag=GCA000153685_04030;product=DUF2834 domain-containing protein;Parent=GCA000153685_04030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420879.1,SO:0001217,UniParc:UPI00000D0FF9,UniRef:UniRef100_P96247,UniRef:UniRef50_P96247,UniRef:UniRef90_P96247
contig_1	Pyrodigal	gene	4303075	4303593	.	-	.	ID=GCA000153685_04031_gene;locus_tag=GCA000153685_04031
contig_1	Pyrodigal	CDS	4303075	4303593	.	-	0	ID=GCA000153685_04031;Name=Conserved protein;locus_tag=GCA000153685_04031;product=Conserved protein;Parent=GCA000153685_04031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8DB,UniRef:UniRef100_A0A0H3LKH8,UniRef:UniRef50_A0AAT9LTJ0,UniRef:UniRef90_P96246
contig_1	Pyrodigal	gene	4303706	4304497	.	+	.	ID=GCA000153685_04032_gene;locus_tag=GCA000153685_04032;gene=araC
contig_1	Pyrodigal	CDS	4303706	4304497	.	+	0	ID=GCA000153685_04032;Name=AraC family transcriptional regulator;locus_tag=GCA000153685_04032;product=AraC family transcriptional regulator;gene=araC;Parent=GCA000153685_04032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420884.1,SO:0001217,UniParc:UPI00001651F4,UniRef:UniRef100_A0A1R3Y5E1,UniRef:UniRef50_A0A654T8D1,UniRef:UniRef90_A0A654T8D1
contig_1	Pyrodigal	gene	4304494	4305753	.	-	.	ID=GCA000153685_04033_gene;locus_tag=GCA000153685_04033;gene=serS
contig_1	Pyrodigal	CDS	4304494	4305753	.	-	0	ID=GCA000153685_04033;Name=serine--tRNA ligase;locus_tag=GCA000153685_04033;product=serine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0005886,GO:0006434,GO:0016260;gene=serS;Parent=GCA000153685_04033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01875,RefSeq:WP_003420889.1,SO:0001217,UniParc:UPI000013668B,UniRef:UniRef100_P9WFT7,UniRef:UniRef50_P9WFT7,UniRef:UniRef90_P9WFT7;ec_number=6.1.1.11
contig_1	Pyrodigal	gene	4305877	4307235	.	+	.	ID=GCA000153685_04034_gene;locus_tag=GCA000153685_04034
contig_1	Pyrodigal	CDS	4305877	4307235	.	+	0	ID=GCA000153685_04034;Name=putative membrane protein Rv3835;locus_tag=GCA000153685_04034;product=putative membrane protein Rv3835;Dbxref=GO:0005576,GO:0005886,GO:0009274;Parent=GCA000153685_04034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8DC,UniRef:UniRef100_P9WKW5,UniRef:UniRef50_P9WKW5,UniRef:UniRef90_P9WKW5
contig_1	Pyrodigal	gene	4307240	4307653	.	+	.	ID=GCA000153685_04035_gene;locus_tag=GCA000153685_04035
contig_1	Pyrodigal	CDS	4307240	4307653	.	+	0	ID=GCA000153685_04035;Name=Zinc metalloprotease;locus_tag=GCA000153685_04035;product=Zinc metalloprotease;Parent=GCA000153685_04035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899719.1,SO:0001217,UniParc:UPI00000C1515,UniRef:UniRef100_P96242,UniRef:UniRef50_B5H5Q5,UniRef:UniRef90_P96242
contig_1	Pyrodigal	gene	4307542	4307775	.	-	.	ID=GCA000153685_04036_gene;locus_tag=GCA000153685_04036
contig_1	Pyrodigal	CDS	4307542	4307775	.	-	0	ID=GCA000153685_04036;Name=hypothetical protein;locus_tag=GCA000153685_04036;product=hypothetical protein;Parent=GCA000153685_04036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E2E5D0,UniRef:UniRef100_A0A0E7SMN2,UniRef:UniRef50_A0A0E7SMN2,UniRef:UniRef90_A0A0E7SMN2
contig_1	Pyrodigal	gene	4307848	4308546	.	-	.	ID=GCA000153685_04037_gene;locus_tag=GCA000153685_04037
contig_1	Pyrodigal	CDS	4307848	4308546	.	-	0	ID=GCA000153685_04037;Name=Phosphoglycerate mutase;locus_tag=GCA000153685_04037;product=Phosphoglycerate mutase;Parent=GCA000153685_04037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899720.1,SO:0001217,UniParc:UPI00000D6031,UniRef:UniRef100_A5U9G6,UniRef:UniRef50_A0A3S4BJS0,UniRef:UniRef90_A0A0H3LKI1
contig_1	Pyrodigal	gene	4308543	4309508	.	-	.	ID=GCA000153685_04038_gene;locus_tag=GCA000153685_04038;gene=pheA
contig_1	Pyrodigal	CDS	4308543	4309508	.	-	0	ID=GCA000153685_04038;Name=prephenate dehydratase;locus_tag=GCA000153685_04038;product=prephenate dehydratase;Dbxref=GO:0004664,GO:0005737,GO:0009094,GO:0016597,GO:0033585,GO:0042803;gene=pheA;Parent=GCA000153685_04038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420906.1,SO:0001217,UniParc:UPI00000D5F8B,UniRef:UniRef100_P9WIC3,UniRef:UniRef50_P9WIC3,UniRef:UniRef90_P9WIC3;ec_number=4.2.1.51
contig_1	Pyrodigal	gene	4309604	4310380	.	+	.	ID=GCA000153685_04039_gene;locus_tag=GCA000153685_04039
contig_1	Pyrodigal	CDS	4309604	4310380	.	+	0	ID=GCA000153685_04039;Name=DUF2470 domain-containing protein;locus_tag=GCA000153685_04039;product=DUF2470 domain-containing protein;Parent=GCA000153685_04039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899722.1,SO:0001217,UniParc:UPI00000D111D,UniRef:UniRef100_P96239,UniRef:UniRef50_P96239,UniRef:UniRef90_P96239
contig_1	Pyrodigal	gene	4310457	4310819	.	+	.	ID=GCA000153685_04040_gene;locus_tag=GCA000153685_04040
contig_1	Pyrodigal	CDS	4310457	4310819	.	+	0	ID=GCA000153685_04040;Name=putative transcriptional regulatory protein;locus_tag=GCA000153685_04040;product=putative transcriptional regulatory protein;Parent=GCA000153685_04040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001651F5,UniRef:UniRef100_A0A0H3LFW2,UniRef:UniRef50_P96238,UniRef:UniRef90_P96238
contig_1	Pyrodigal	gene	4311017	4311562	.	+	.	ID=GCA000153685_04041_gene;locus_tag=GCA000153685_04041;gene=bfrB
contig_1	Pyrodigal	CDS	4311017	4311562	.	+	0	ID=GCA000153685_04041;Name=ferritin BfrB;locus_tag=GCA000153685_04041;product=ferritin BfrB;Dbxref=GO:0001666,GO:0004322,GO:0005576,GO:0005737,GO:0005829,GO:0005886,GO:0006826,GO:0006879,GO:0008198,GO:0008199,GO:0009274,GO:0051409,GO:0140315,GO:0140737;gene=bfrB;Parent=GCA000153685_04041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003420920,KEGG:K22336,RefSeq:WP_003420920.1,SO:0001217,UniParc:UPI000004A4B4,UniRef:UniRef100_P9WNE5,UniRef:UniRef50_P9WNE5,UniRef:UniRef90_P9WNE5;ec_number=1.16.3.1
contig_1	Pyrodigal	gene	4311577	4312407	.	-	.	ID=GCA000153685_04042_gene;locus_tag=GCA000153685_04042;gene=glpQ1
contig_1	Pyrodigal	CDS	4311577	4312407	.	-	0	ID=GCA000153685_04042;Name=putative glycerophosphodiester phosphodiesterase 1;locus_tag=GCA000153685_04042;product=putative glycerophosphodiester phosphodiesterase 1;Dbxref=GO:0006071,GO:0006629,GO:0008889,GO:0046872;gene=glpQ1;Parent=GCA000153685_04042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01126,SO:0001217,UniParc:UPI00000D502A,UniRef:UniRef100_P9WMU3,UniRef:UniRef50_P9WMU3,UniRef:UniRef90_P9WMU3;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	4312407	4313108	.	-	.	ID=GCA000153685_04043_gene;locus_tag=GCA000153685_04043
contig_1	Pyrodigal	CDS	4312407	4313108	.	-	0	ID=GCA000153685_04043;Name=Transmembrane protein;locus_tag=GCA000153685_04043;product=Transmembrane protein;Parent=GCA000153685_04043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000169A351,UniRef:UniRef100_A0A085YHG4,UniRef:UniRef50_A0A1X1UUG0,UniRef:UniRef90_A0A654U1M8
contig_1	Pyrodigal	gene	4313974	4314123	.	+	.	ID=GCA000153685_04044_gene;locus_tag=GCA000153685_04044
contig_1	Pyrodigal	CDS	4313974	4314123	.	+	0	ID=GCA000153685_04044;Name=hypothetical protein;locus_tag=GCA000153685_04044;product=hypothetical protein;Parent=GCA000153685_04044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003420934.1,SO:0001217,UniParc:UPI00000D2DD9,UniRef:UniRef100_A0A0H3LH12,UniRef:UniRef50_B2HMN1,UniRef:UniRef90_A0A0H3LH12
contig_1	Pyrodigal	gene	4314360	4314491	.	-	.	ID=GCA000153685_04045_gene;locus_tag=GCA000153685_04045
contig_1	Pyrodigal	CDS	4314360	4314491	.	-	0	ID=GCA000153685_04045;Name=Transposase;locus_tag=GCA000153685_04045;product=Transposase;Parent=GCA000153685_04045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E35975,UniRef:UniRef100_A0A0E8BL30,UniRef:UniRef50_A0A0E8BL30,UniRef:UniRef90_A0A0E8BL30
contig_1	Pyrodigal	gene	4315614	4316105	.	+	.	ID=GCA000153685_04046_gene;locus_tag=GCA000153685_04046
contig_1	Pyrodigal	CDS	4315614	4316105	.	+	0	ID=GCA000153685_04046;Name=putative transposase;locus_tag=GCA000153685_04046;product=putative transposase;Parent=GCA000153685_04046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003422266.1,SO:0001217,UniParc:UPI00000D605E,UniRef:UniRef100_P96234,UniRef:UniRef50_P96234,UniRef:UniRef90_P96234
contig_1	Pyrodigal	gene	4316120	4316479	.	+	.	ID=GCA000153685_04047_gene;locus_tag=GCA000153685_04047
contig_1	Pyrodigal	CDS	4316120	4316479	.	+	0	ID=GCA000153685_04047;Name=Transposase;locus_tag=GCA000153685_04047;product=Transposase;Parent=GCA000153685_04047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900767.1,SO:0001217,UniParc:UPI00000C1514,UniRef:UniRef100_P96233,UniRef:UniRef50_P96233,UniRef:UniRef90_P96233
contig_1	Pyrodigal	gene	4316694	4316795	.	-	.	ID=GCA000153685_04048_gene;locus_tag=GCA000153685_04048
contig_1	Pyrodigal	CDS	4316694	4316795	.	-	0	ID=GCA000153685_04048;Name=hypothetical protein;locus_tag=GCA000153685_04048;product=hypothetical protein;Parent=GCA000153685_04048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026D42B3,UniRef:UniRef100_A0A0E8VWG3,UniRef:UniRef50_A0A0E8VWG3,UniRef:UniRef90_A0A0E8VWG3
contig_1	Pyrodigal	gene	4317093	4317272	.	-	.	ID=GCA000153685_04049_gene;locus_tag=GCA000153685_04049
contig_1	Pyrodigal	CDS	4317093	4317272	.	-	0	ID=GCA000153685_04049;Name=hypothetical protein;locus_tag=GCA000153685_04049;product=hypothetical protein;Parent=GCA000153685_04049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899729.1,SO:0001217,UniParc:UPI00000D2DDE,UniRef:UniRef100_Q8VIS4,UniRef:UniRef50_A0A0H3LN24,UniRef:UniRef90_A0A0H3LN24
contig_1	Pyrodigal	gene	4317543	4318166	.	+	.	ID=GCA000153685_04050_gene;locus_tag=GCA000153685_04050;gene=sodA
contig_1	Pyrodigal	CDS	4317543	4318166	.	+	0	ID=GCA000153685_04050;Name=superoxide dismutase;locus_tag=GCA000153685_04050;product=superoxide dismutase;Dbxref=GO:0004784,GO:0005506,GO:0005576,GO:0005829,GO:0005886,GO:0006979,GO:0042597,GO:0098754;gene=sodA;Parent=GCA000153685_04050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_003399735.1,SO:0001217,UniParc:UPI0000111D34,UniRef:UniRef100_P9WGE7,UniRef:UniRef50_P9WGE7,UniRef:UniRef90_P9WGE7,VFDB:VFC0282,VFDB:VFG001421;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	4318377	4318910	.	+	.	ID=GCA000153685_04051_gene;locus_tag=GCA000153685_04051
contig_1	Pyrodigal	CDS	4318377	4318910	.	+	0	ID=GCA000153685_04051;Name=Peptidase;locus_tag=GCA000153685_04051;product=Peptidase;Parent=GCA000153685_04051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899730.1,SO:0001217,UniParc:UPI00000D11CD,UniRef:UniRef100_P96230,UniRef:UniRef50_A0A318RS13,UniRef:UniRef90_P96230
contig_1	Pyrodigal	gene	4319165	4320073	.	+	.	ID=GCA000153685_04052_gene;locus_tag=GCA000153685_04052
contig_1	Pyrodigal	CDS	4319165	4320073	.	+	0	ID=GCA000153685_04052;Name=GDT1 family protein;locus_tag=GCA000153685_04052;product=GDT1 family protein;Parent=GCA000153685_04052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003399745.1,SO:0001217,UniParc:UPI00000D1191,UniRef:UniRef100_P96229,UniRef:UniRef50_R4MC85,UniRef:UniRef90_R4MC85
contig_1	Pyrodigal	gene	4320338	4320736	.	+	.	ID=GCA000153685_04053_gene;locus_tag=GCA000153685_04053;gene=espR
contig_1	Pyrodigal	CDS	4320338	4320736	.	+	0	ID=GCA000153685_04053;Name=type VII secretion system ESX-1 transcriptional regulator EspR;locus_tag=GCA000153685_04053;product=type VII secretion system ESX-1 transcriptional regulator EspR;Dbxref=GO:0003677,GO:0005576,GO:0005829,GO:0005886,GO:0006355,GO:0009274,GO:0009295,GO:0042802,GO:0050708,GO:0052572;gene=espR;Parent=GCA000153685_04053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399759,KEGG:K27097,RefSeq:WP_003399759.1,SO:0001217,UniParc:UPI00000C14BC,UniRef:UniRef100_P9WJB7,UniRef:UniRef50_P9WJB7,UniRef:UniRef90_P9WJB7
contig_1	Pyrodigal	gene	4320854	4321510	.	+	.	ID=GCA000153685_04054_gene;locus_tag=GCA000153685_04054
contig_1	Pyrodigal	CDS	4320854	4321510	.	+	0	ID=GCA000153685_04054;Name=Conserved protein;locus_tag=GCA000153685_04054;product=Conserved protein;Parent=GCA000153685_04054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003399771.1,SO:0001217,UniParc:UPI00000D0FDB,UniRef:UniRef100_P96227,UniRef:UniRef50_A0A4R8QW74,UniRef:UniRef90_P96227
contig_1	Pyrodigal	gene	4321522	4321806	.	+	.	ID=GCA000153685_04055_gene;locus_tag=GCA000153685_04055
contig_1	Pyrodigal	CDS	4321522	4321806	.	+	0	ID=GCA000153685_04055;Name=putative membrane protein;locus_tag=GCA000153685_04055;product=putative membrane protein;Parent=GCA000153685_04055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003399775.1,SO:0001217,UniParc:UPI00000D0F81,UniRef:UniRef100_P96226,UniRef:UniRef50_A0A1X2LWK1,UniRef:UniRef90_P96226
contig_1	Pyrodigal	gene	4321913	4322317	.	+	.	ID=GCA000153685_04056_gene;locus_tag=GCA000153685_04056;gene=hns
contig_1	Pyrodigal	CDS	4321913	4322317	.	+	0	ID=GCA000153685_04056;Name=histone-like protein Hns;locus_tag=GCA000153685_04056;product=histone-like protein Hns;Dbxref=GO:0003677,GO:0005886;gene=hns;Parent=GCA000153685_04056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399779,RefSeq:WP_003399779.1,SO:0001217,UniParc:UPI00000D1102,UniRef:UniRef100_I6YHB0,UniRef:UniRef50_I6YHB0,UniRef:UniRef90_I6YHB0
contig_1	Pyrodigal	gene	4322334	4322807	.	+	.	ID=GCA000153685_04057_gene;locus_tag=GCA000153685_04057;gene=rraA
contig_1	Pyrodigal	CDS	4322334	4322807	.	+	0	ID=GCA000153685_04057;Name=ribonuclease E activity regulator RraA;locus_tag=GCA000153685_04057;product=ribonuclease E activity regulator RraA;Dbxref=GO:0008428,GO:0008948,GO:0046872,GO:0047443,GO:0051252;gene=rraA;Parent=GCA000153685_04057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02553,RefSeq:WP_003399786.1,SO:0001217,UniParc:UPI000012EEFE,UniRef:UniRef100_P9WGY3,UniRef:UniRef50_A0R664,UniRef:UniRef90_P9WGY3;ec_number=4.1.3.17
contig_1	Pyrodigal	gene	4322843	4324312	.	-	.	ID=GCA000153685_04058_gene;locus_tag=GCA000153685_04058;gene=ethA
contig_1	Pyrodigal	CDS	4322843	4324312	.	-	0	ID=GCA000153685_04058;Name=FAD-containing monooxygenase EthA;locus_tag=GCA000153685_04058;product=FAD-containing monooxygenase EthA;Dbxref=GO:0004499,GO:0005829,GO:0005886,GO:0006805,GO:0009274,GO:0016709,GO:0033776,GO:0050660,GO:0070402,GO:0071949;gene=ethA;Parent=GCA000153685_04058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899731,KEGG:K10215,RefSeq:WP_003899731.1,SO:0001217,UniParc:UPI00000D5F46,UniRef:UniRef100_P9WNF9,UniRef:UniRef50_P9WNF9,UniRef:UniRef90_P9WNF9;ec_number=1.14.13.-
contig_1	Pyrodigal	gene	4324388	4325038	.	+	.	ID=GCA000153685_04059_gene;locus_tag=GCA000153685_04059;gene=ethR
contig_1	Pyrodigal	CDS	4324388	4325038	.	+	0	ID=GCA000153685_04059;Name=HTH-type transcriptional regulator EthR;locus_tag=GCA000153685_04059;product=HTH-type transcriptional regulator EthR;Dbxref=GO:0000976,GO:0003700,GO:0005829,GO:0006355,GO:0045892,GO:0046677;gene=ethR;Parent=GCA000153685_04059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399797,KEGG:K21961,RefSeq:WP_003399797.1,SO:0001217,UniParc:UPI00000D5E34,UniRef:UniRef100_P9WMC1,UniRef:UniRef50_P9WMC1,UniRef:UniRef90_P9WMC1
contig_1	Pyrodigal	gene	4325240	4326247	.	-	.	ID=GCA000153685_04060_gene;locus_tag=GCA000153685_04060
contig_1	Pyrodigal	CDS	4325240	4326247	.	-	0	ID=GCA000153685_04060;Name=PHP domain-containing protein;locus_tag=GCA000153685_04060;product=PHP domain-containing protein;Dbxref=GO:0003824;Parent=GCA000153685_04060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003399801.1,SO:0001217,UniParc:UPI00000D10A5,UniRef:UniRef100_P96221,UniRef:UniRef50_P96221,UniRef:UniRef90_P96221
contig_1	Pyrodigal	gene	4326256	4326453	.	-	.	ID=GCA000153685_04061_gene;locus_tag=GCA000153685_04061
contig_1	Pyrodigal	CDS	4326256	4326453	.	-	0	ID=GCA000153685_04061;Name=Integral membrane protein;locus_tag=GCA000153685_04061;product=Integral membrane protein;Parent=GCA000153685_04061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003399803.1,SO:0001217,UniParc:UPI00000D1071,UniRef:UniRef100_P96220,UniRef:UniRef50_A0A8I0ET77,UniRef:UniRef90_A0A8I0ET77
contig_1	Pyrodigal	gene	4326584	4326724	.	-	.	ID=GCA000153685_04062_gene;locus_tag=GCA000153685_04062
contig_1	Pyrodigal	CDS	4326584	4326724	.	-	0	ID=GCA000153685_04062;Name=hypothetical protein;locus_tag=GCA000153685_04062;product=hypothetical protein;Parent=GCA000153685_04062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D2DE1,UniRef:UniRef100_A0A0H3LH34,UniRef:UniRef50_A0A0H3LH34,UniRef:UniRef90_A0A0H3LH34
contig_1	Pyrodigal	gene	4326878	4328344	.	-	.	ID=GCA000153685_04063_gene;locus_tag=GCA000153685_04063;gene=gltD
contig_1	Pyrodigal	CDS	4326878	4328344	.	-	0	ID=GCA000153685_04063;Name=Glutamate synthase [NADPH] small chain;locus_tag=GCA000153685_04063;product=Glutamate synthase [NADPH] small chain;Dbxref=GO:0004355,GO:0005829,GO:0005886,GO:0016639,GO:0046872,GO:0051539,GO:0097054;gene=gltD;Parent=GCA000153685_04063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0493,COG:ER,RefSeq:WP_003899732.1,SO:0001217,UniParc:UPI00000D5E5B,UniRef:UniRef100_P9WN19,UniRef:UniRef50_P9WN19,UniRef:UniRef90_P9WN19;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	4328337	4332920	.	-	.	ID=GCA000153685_04064_gene;locus_tag=GCA000153685_04064;gene=gltB
contig_1	Pyrodigal	CDS	4328337	4332920	.	-	0	ID=GCA000153685_04064;Name=glutamate synthase large subunit;locus_tag=GCA000153685_04064;product=glutamate synthase large subunit;Dbxref=GO:0003824,GO:0004355,GO:0005829,GO:0005886,GO:0006537,GO:0008152,GO:0015930,GO:0016491,GO:0019676,GO:0046872,GO:0051538,GO:0097054;gene=gltB;Parent=GCA000153685_04064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0070,COG:E,RefSeq:WP_003899733.1,SO:0001217,UniParc:UPI0000165387,UniRef:UniRef100_P96218,UniRef:UniRef50_P96218,UniRef:UniRef90_P96218;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	4333913	4334788	.	+	.	ID=GCA000153685_04065_gene;locus_tag=GCA000153685_04065
contig_1	Pyrodigal	CDS	4333913	4334788	.	+	0	ID=GCA000153685_04065;Name=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;locus_tag=GCA000153685_04065;product=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;Parent=GCA000153685_04065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003917853.1,SO:0001217,UniParc:UPI00005EE8E7,UniRef:UniRef100_P96217,UniRef:UniRef50_R4MD64,UniRef:UniRef90_R4MD64
contig_1	Pyrodigal	gene	4335010	4335300	.	-	.	ID=GCA000153685_04066_gene;locus_tag=GCA000153685_04066;gene=whiB6
contig_1	Pyrodigal	CDS	4335010	4335300	.	-	0	ID=GCA000153685_04066;Name=putative transcriptional regulator WhiB6;locus_tag=GCA000153685_04066;product=putative transcriptional regulator WhiB6;Dbxref=GO:0003677,GO:0005737,GO:0006355,GO:0035731,GO:0046872,GO:0051539;gene=whiB6;Parent=GCA000153685_04066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18957,RefSeq:WP_003912359.1,SO:0001217,UniParc:UPI00005EE8E8,UniRef:UniRef100_P9WF37,UniRef:UniRef50_P9WF37,UniRef:UniRef90_P9WF37
contig_1	Pyrodigal	gene	4335753	4336865	.	+	.	ID=GCA000153685_04067_gene;locus_tag=GCA000153685_04067
contig_1	Pyrodigal	CDS	4335753	4336865	.	+	0	ID=GCA000153685_04067;Name=FHA domain-containing protein;locus_tag=GCA000153685_04067;product=FHA domain-containing protein;Parent=GCA000153685_04067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_015288657.1,SO:0001217,UniParc:UPI0002A59DF1,UniRef:UniRef100_P96214,UniRef:UniRef50_P96214,UniRef:UniRef90_P96214
contig_1	Pyrodigal	gene	4337108	4338316	.	+	.	ID=GCA000153685_04068_gene;locus_tag=GCA000153685_04068;gene=espE
contig_1	Pyrodigal	CDS	4337108	4338316	.	+	0	ID=GCA000153685_04068;Name=type VII secretion system ESX-1 associated protein EspE;locus_tag=GCA000153685_04068;product=type VII secretion system ESX-1 associated protein EspE;Dbxref=GO:0005886,GO:0051701;gene=espE;Parent=GCA000153685_04068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899736,BlastRules:WP_012396939,KEGG:K27098,RefSeq:WP_003899736.1,SO:0001217,UniParc:UPI00000D1111,UniRef:UniRef100_P9WJD3,UniRef:UniRef50_P9WJD3,UniRef:UniRef90_P9WJD3
contig_1	Pyrodigal	gene	4338404	4338715	.	+	.	ID=GCA000153685_04069_gene;locus_tag=GCA000153685_04069;gene=espF
contig_1	Pyrodigal	CDS	4338404	4338715	.	+	0	ID=GCA000153685_04069;Name=type VII secretion system ESX-1 associated protein EspF;locus_tag=GCA000153685_04069;product=type VII secretion system ESX-1 associated protein EspF;Dbxref=GO:0009274;gene=espF;Parent=GCA000153685_04069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899737,KEGG:K27089,RefSeq:WP_003899737.1,SO:0001217,UniParc:UPI00000D11CC,UniRef:UniRef100_P9WJD1,UniRef:UniRef50_P9WJD1,UniRef:UniRef90_P9WJD1
contig_1	Pyrodigal	gene	4338718	4339569	.	+	.	ID=GCA000153685_04070_gene;locus_tag=GCA000153685_04070;gene=espG1
contig_1	Pyrodigal	CDS	4338718	4339569	.	+	0	ID=GCA000153685_04070;Name=type VII secretion system ESX-1 adaptor EspG1;locus_tag=GCA000153685_04070;product=type VII secretion system ESX-1 adaptor EspG1;Dbxref=GO:0001666,GO:0005737,GO:0005886;gene=espG1;Parent=GCA000153685_04070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399839,KEGG:K27091,RefSeq:WP_003399839.1,SO:0001217,UniParc:UPI00000C155A,UniRef:UniRef100_P96210,UniRef:UniRef50_P96210,UniRef:UniRef90_P96210
contig_1	Pyrodigal	gene	4339608	4340159	.	+	.	ID=GCA000153685_04071_gene;locus_tag=GCA000153685_04071;gene=espH
contig_1	Pyrodigal	CDS	4339608	4340159	.	+	0	ID=GCA000153685_04071;Name=type VII secretion system ESX-1 associated protein EspH;locus_tag=GCA000153685_04071;product=type VII secretion system ESX-1 associated protein EspH;Dbxref=GO:0005886,GO:0046677,GO:0052167;gene=espH;Parent=GCA000153685_04071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399844,KEGG:K27090,RefSeq:WP_003399844.1,SO:0001217,UniParc:UPI00000C1570,UniRef:UniRef100_O69732,UniRef:UniRef50_O69732,UniRef:UniRef90_O69732
contig_1	Pyrodigal	gene	4340152	4341873	.	+	.	ID=GCA000153685_04072_gene;locus_tag=GCA000153685_04072;gene=eccA1
contig_1	Pyrodigal	CDS	4340152	4341873	.	+	0	ID=GCA000153685_04072;Name=type VII secretion system ESX-1 AAA family ATPase EccA1;locus_tag=GCA000153685_04072;product=type VII secretion system ESX-1 AAA family ATPase EccA1;Dbxref=GO:0005524,GO:0005737,GO:0005886,GO:0009306,GO:0016887,GO:0051701;gene=eccA1;Parent=GCA000153685_04072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399850,BlastRules:WP_003891386,BlastRules:WP_012396943,COG:COG0464,COG:MDT,KEGG:K27084,RefSeq:WP_003399850.1,SO:0001217,UniParc:UPI00001395C5,UniRef:UniRef100_P9WPH9,UniRef:UniRef50_P9WPH9,UniRef:UniRef90_P9WPH9
contig_1	Pyrodigal	gene	4341877	4343319	.	+	.	ID=GCA000153685_04073_gene;locus_tag=GCA000153685_04073;gene=eccB1
contig_1	Pyrodigal	CDS	4341877	4343319	.	+	0	ID=GCA000153685_04073;Name=type VII secretion system ESX-1 subunit EccB1;locus_tag=GCA000153685_04073;product=type VII secretion system ESX-1 subunit EccB1;Dbxref=GO:0005524,GO:0005576,GO:0005886,GO:0009274,GO:0009306,GO:0016787,GO:0052167;gene=eccB1;Parent=GCA000153685_04073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399854,KEGG:K27085,RefSeq:WP_003399854.1,SO:0001217,UniParc:UPI00000D1163,UniRef:UniRef100_P9WNR7,UniRef:UniRef50_P9WNR7,UniRef:UniRef90_P9WNR7;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	4343319	4345562	.	+	.	ID=GCA000153685_04074_gene;locus_tag=GCA000153685_04074;gene=eccCa1
contig_1	Pyrodigal	CDS	4343319	4345562	.	+	0	ID=GCA000153685_04074;Name=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;locus_tag=GCA000153685_04074;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009274,GO:0042783,GO:0044315,GO:0051701;gene=eccCa1;Parent=GCA000153685_04074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899738,RefSeq:WP_003900769.1,SO:0001217,UniParc:UPI0001277FFF,UniRef:UniRef100_UPI0001277FFF,UniRef:UniRef50_P9WNB3,UniRef:UniRef90_P9WNB3
contig_1	Pyrodigal	gene	4345665	4347440	.	+	.	ID=GCA000153685_04075_gene;locus_tag=GCA000153685_04075;gene=eccCb1
contig_1	Pyrodigal	CDS	4345665	4347440	.	+	0	ID=GCA000153685_04075;Name=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;locus_tag=GCA000153685_04075;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0005886,GO:0009274,GO:0016887,GO:0042783,GO:0044315,GO:0051701;gene=eccCb1;Parent=GCA000153685_04075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399865,COG:COG1674,COG:D,RefSeq:WP_003399865.1,SO:0001217,UniParc:UPI00000D5F33,UniRef:UniRef100_P9WNB1,UniRef:UniRef50_P9WNB1,UniRef:UniRef90_P9WNB1
contig_1	Pyrodigal	gene	4347583	4347879	.	+	.	ID=GCA000153685_04076_gene;locus_tag=GCA000153685_04076;gene=pE35
contig_1	Pyrodigal	CDS	4347583	4347879	.	+	0	ID=GCA000153685_04076;Name=type VII secretion system ESX-1 target PE35;locus_tag=GCA000153685_04076;product=type VII secretion system ESX-1 target PE35;Dbxref=GO:0005576,GO:0009986;gene=pE35;Parent=GCA000153685_04076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003912361,RefSeq:WP_003399870.1,SO:0001217,UniParc:UPI000015A6BB,UniRef:UniRef100_P9WIG7,UniRef:UniRef50_P9WIG7,UniRef:UniRef90_P9WIG7
contig_1	Pyrodigal	gene	4347913	4349019	.	+	.	ID=GCA000153685_04077_gene;locus_tag=GCA000153685_04077;gene=pPE68
contig_1	Pyrodigal	CDS	4347913	4349019	.	+	0	ID=GCA000153685_04077;Name=type VII secretion system ESX-1 target PPE68;locus_tag=GCA000153685_04077;product=type VII secretion system ESX-1 target PPE68;Dbxref=GO:0005576,GO:0005886,GO:0009986,GO:0052572;gene=pPE68;Parent=GCA000153685_04077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399879,RefSeq:WP_015345210.1,SO:0001217,UniParc:UPI0002A7F205,UniRef:UniRef100_A0A0H3LN48,UniRef:UniRef50_P9WHW9,UniRef:UniRef90_P9WHW9
contig_1	Pyrodigal	gene	4349112	4349414	.	+	.	ID=GCA000153685_04078_gene;locus_tag=GCA000153685_04078;gene=esxB
contig_1	Pyrodigal	CDS	4349112	4349414	.	+	0	ID=GCA000153685_04078;Name=type VII secretion system ESX-1 WXG100 family target CFP-10;locus_tag=GCA000153685_04078;product=type VII secretion system ESX-1 WXG100 family target CFP-10;Dbxref=GO:0005576,GO:0005886,GO:0009274,GO:0044165,GO:0044228,GO:0044315,GO:0046812;gene=esxB;Parent=GCA000153685_04078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399940,RefSeq:WP_003900771.1,SO:0001217,UniParc:UPI0001278017,UniRef:UniRef100_A0A0H3LG02,UniRef:UniRef50_P9WNK5,UniRef:UniRef90_P9WNK5
contig_1	Pyrodigal	gene	4349447	4349734	.	+	.	ID=GCA000153685_04079_gene;locus_tag=GCA000153685_04079;gene=esxA
contig_1	Pyrodigal	CDS	4349447	4349734	.	+	0	ID=GCA000153685_04079;Name=type VII secretion system ESX-1 WXG100 family target ESAT-6;locus_tag=GCA000153685_04079;product=type VII secretion system ESX-1 WXG100 family target ESAT-6;Dbxref=GO:0005576,GO:0005737,GO:0005829,GO:0005886,GO:0009274,GO:0020002,GO:0042803,GO:0044165,GO:0044228,GO:0044315,GO:0046812,GO:0052027,GO:0052085;gene=esxA;Parent=GCA000153685_04079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399963,COG:COG4842,COG:V,RefSeq:WP_003399963.1,SO:0001217,UniParc:UPI0000036DD3,UniRef:UniRef100_P9WNK7,UniRef:UniRef50_P9WNK7,UniRef:UniRef90_P9WNK7
contig_1	Pyrodigal	gene	4349859	4350260	.	-	.	ID=GCA000153685_04080_gene;locus_tag=GCA000153685_04080
contig_1	Pyrodigal	CDS	4349859	4350260	.	-	0	ID=GCA000153685_04080;Name=PE-PGRS family protein;locus_tag=GCA000153685_04080;product=PE-PGRS family protein;Parent=GCA000153685_04080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_009938737.1,SO:0001217,UniParc:UPI00005EE8ED,UniRef:UniRef100_A0A0E8V2T7,UniRef:UniRef50_A0A0E8V2T7,UniRef:UniRef90_A0A0E8V2T7
contig_1	Pyrodigal	gene	4350922	4351848	.	+	.	ID=GCA000153685_04081_gene;locus_tag=GCA000153685_04081;gene=espI
contig_1	Pyrodigal	CDS	4350922	4351848	.	+	0	ID=GCA000153685_04081;Name=ESX-1 secretion-associated protein EspI;locus_tag=GCA000153685_04081;product=ESX-1 secretion-associated protein EspI;gene=espI;Parent=GCA000153685_04081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27092,SO:0001217,UniParc:UPI000015A6BD,UniRef:UniRef100_A0A045J9W7,UniRef:UniRef50_A0A2I7WDW9,UniRef:UniRef90_A0A2I7WDW9
contig_1	Pyrodigal	gene	4351917	4353380	.	+	.	ID=GCA000153685_04082_gene;locus_tag=GCA000153685_04082;gene=eccD1
contig_1	Pyrodigal	CDS	4351917	4353380	.	+	0	ID=GCA000153685_04082;Name=type VII secretion system ESX-1 subunit EccD1;locus_tag=GCA000153685_04082;product=type VII secretion system ESX-1 subunit EccD1;Dbxref=GO:0005886,GO:0009274,GO:0009306,GO:0042783,GO:0051701;gene=eccD1;Parent=GCA000153685_04082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399976,KEGG:K27087,SO:0001217,UniParc:UPI00005F63B1,UniRef:UniRef100_A0A0H3LH57,UniRef:UniRef50_P9WNQ7,UniRef:UniRef90_P9WNQ7
contig_1	Pyrodigal	gene	4353531	4354373	.	+	.	ID=GCA000153685_04083_gene;locus_tag=GCA000153685_04083;gene=espJ
contig_1	Pyrodigal	CDS	4353531	4354373	.	+	0	ID=GCA000153685_04083;Name=type VII secretion system ESX-1 associated protein EspJ;locus_tag=GCA000153685_04083;product=type VII secretion system ESX-1 associated protein EspJ;Dbxref=GO:0005576;gene=espJ;Parent=GCA000153685_04083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003901751,KEGG:K27100,RefSeq:WP_003899742.1,SO:0001217,UniParc:UPI00005F63B2,UniRef:UniRef100_P9WJC2,UniRef:UniRef50_P9WJC3,UniRef:UniRef90_P9WJC3
contig_1	Pyrodigal	gene	4354431	4356656	.	-	.	ID=GCA000153685_04084_gene;locus_tag=GCA000153685_04084;gene=espK
contig_1	Pyrodigal	CDS	4354431	4356656	.	-	0	ID=GCA000153685_04084;Name=type VII secretion system ESX-1 associated protein EspK;locus_tag=GCA000153685_04084;product=type VII secretion system ESX-1 associated protein EspK;Dbxref=GO:0005829,GO:0005886;gene=espK;Parent=GCA000153685_04084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_010886183,KEGG:K27101,RefSeq:WP_015345211.1,SO:0001217,UniParc:UPI0002A8820D,UniRef:UniRef100_A0A1K5KX89,UniRef:UniRef50_P9WJC1,UniRef:UniRef90_P9WJC1
contig_1	Pyrodigal	gene	4357073	4357420	.	-	.	ID=GCA000153685_04085_gene;locus_tag=GCA000153685_04085;gene=espL
contig_1	Pyrodigal	CDS	4357073	4357420	.	-	0	ID=GCA000153685_04085;Name=type VII secretion system ESX-1 associated protein EspL;locus_tag=GCA000153685_04085;product=type VII secretion system ESX-1 associated protein EspL;Dbxref=GO:0003677,GO:0005886,GO:0009274,GO:0052170;gene=espL;Parent=GCA000153685_04085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399988,KEGG:K27102,RefSeq:WP_003399988.1,SO:0001217,UniParc:UPI00000CCBBA,UniRef:UniRef100_P9WJB9,UniRef:UniRef50_P9WJB9,UniRef:UniRef90_P9WJB9
contig_1	Pyrodigal	gene	4357417	4358799	.	-	.	ID=GCA000153685_04086_gene;locus_tag=GCA000153685_04086;gene=espB
contig_1	Pyrodigal	CDS	4357417	4358799	.	-	0	ID=GCA000153685_04086;Name=type VII secretion system ESX-1 target EspB;locus_tag=GCA000153685_04086;product=type VII secretion system ESX-1 target EspB;Dbxref=GO:0005576,GO:0042802,GO:0044315,GO:0051701;gene=espB;Parent=GCA000153685_04086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003399995,BlastRules:WP_003891407,BlastRules:WP_012396956,KEGG:K27099,RefSeq:WP_003399995.1,SO:0001217,UniParc:UPI000012ECFF,UniRef:UniRef100_P9WJD9,UniRef:UniRef50_P9WJD9,UniRef:UniRef90_P9WJD9
contig_1	Pyrodigal	gene	4358906	4360294	.	-	.	ID=GCA000153685_04087_gene;locus_tag=GCA000153685_04087;gene=eccE1
contig_1	Pyrodigal	CDS	4358906	4360294	.	-	0	ID=GCA000153685_04087;Name=type VII secretion system ESX-1 subunit EccE1;locus_tag=GCA000153685_04087;product=type VII secretion system ESX-1 subunit EccE1;Dbxref=GO:0005886;gene=eccE1;Parent=GCA000153685_04087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400000,KEGG:K27088,RefSeq:WP_003900773.1,SO:0001217,UniParc:UPI0001278019,UniRef:UniRef100_A0A0H3LG12,UniRef:UniRef50_A0QNL0,UniRef:UniRef90_P9WJE9
contig_1	Pyrodigal	gene	4360291	4361661	.	-	.	ID=GCA000153685_04088_gene;locus_tag=GCA000153685_04088;gene=mycP1
contig_1	Pyrodigal	CDS	4360291	4361661	.	-	0	ID=GCA000153685_04088;Name=type VII secretion system ESX-1 serine protease mycosin MycP1;locus_tag=GCA000153685_04088;product=type VII secretion system ESX-1 serine protease mycosin MycP1;Dbxref=GO:0004252,GO:0005886,GO:0006508,GO:0008236,GO:0009306,GO:0009986,GO:0016485,GO:0044003,GO:0051046;gene=mycP1;Parent=GCA000153685_04088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400004,BlastRules:WP_011726654,BlastRules:WP_041325041,RefSeq:WP_003899744.1,SO:0001217,UniParc:UPI00005EE8F0,UniRef:UniRef100_A0A0H3LG16,UniRef:UniRef50_O05461,UniRef:UniRef90_O05461;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	4361853	4362266	.	-	.	ID=GCA000153685_04089_gene;locus_tag=GCA000153685_04089;gene=eccA
contig_1	Pyrodigal	CDS	4361853	4362266	.	-	0	ID=GCA000153685_04089;Name=type VII secretion AAA-ATPase EccA;locus_tag=GCA000153685_04089;product=type VII secretion AAA-ATPase EccA;Dbxref=GO:0005524,GO:0005737,GO:0009306,GO:0016887;gene=eccA;Parent=GCA000153685_04089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27084,SO:0001217,UniParc:UPI0004B8B429,UniRef:UniRef100_A0A0E9A483,UniRef:UniRef50_P9WPH7,UniRef:UniRef90_P9WPH7
contig_1	Pyrodigal	gene	4362333	4363703	.	-	.	ID=GCA000153685_04090_gene;locus_tag=GCA000153685_04090;gene=eccA
contig_1	Pyrodigal	CDS	4362333	4363703	.	-	0	ID=GCA000153685_04090;Name=type VII secretion AAA-ATPase EccA;locus_tag=GCA000153685_04090;product=type VII secretion AAA-ATPase EccA;Dbxref=GO:0005524,GO:0005737,GO:0009306,GO:0016887;gene=eccA;Parent=GCA000153685_04090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27084,SO:0001217,UniParc:UPI00045A972B,UniRef:UniRef100_P59976,UniRef:UniRef50_P9WPH7,UniRef:UniRef90_P9WPH7
contig_1	Pyrodigal	gene	4363782	4365395	.	-	.	ID=GCA000153685_04091_gene;locus_tag=GCA000153685_04091;gene=eccE2
contig_1	Pyrodigal	CDS	4363782	4365395	.	-	0	ID=GCA000153685_04091;Name=type VII secretion system ESX-2 subunit EccE2;locus_tag=GCA000153685_04091;product=type VII secretion system ESX-2 subunit EccE2;Dbxref=GO:0005886;gene=eccE2;Parent=GCA000153685_04091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003902572,KEGG:K27088,RefSeq:WP_003902572.1,SO:0001217,UniParc:UPI00000C14C3,UniRef:UniRef100_P9WJE7,UniRef:UniRef50_P9WJE7,UniRef:UniRef90_P9WJE7
contig_1	Pyrodigal	gene	4365392	4366420	.	-	.	ID=GCA000153685_04092_gene;locus_tag=GCA000153685_04092;gene=mycP
contig_1	Pyrodigal	CDS	4365392	4366420	.	-	0	ID=GCA000153685_04092;Name=type VII secretion-associated serine protease mycosin;locus_tag=GCA000153685_04092;product=type VII secretion-associated serine protease mycosin;Dbxref=GO:0008236,GO:0009306;gene=mycP;Parent=GCA000153685_04092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002A86201,UniRef:UniRef100_A0A654TNY4,UniRef:UniRef50_O05458,UniRef:UniRef90_A0A654TNY4
contig_1	Pyrodigal	gene	4366474	4367043	.	-	.	ID=GCA000153685_04093_gene;locus_tag=GCA000153685_04093;gene=mycP2
contig_1	Pyrodigal	CDS	4366474	4367043	.	-	0	ID=GCA000153685_04093;Name=Alanine and proline rich membrane-anchored mycosin mycP2;locus_tag=GCA000153685_04093;product=Alanine and proline rich membrane-anchored mycosin mycP2;gene=mycP2;Parent=GCA000153685_04093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000459A42E,UniRef:UniRef100_A0A1K3A174,UniRef:UniRef50_A0A655AA55,UniRef:UniRef90_A0A655AA55
contig_1	Pyrodigal	gene	4367028	4368557	.	-	.	ID=GCA000153685_04094_gene;locus_tag=GCA000153685_04094;gene=eccD2
contig_1	Pyrodigal	CDS	4367028	4368557	.	-	0	ID=GCA000153685_04094;Name=type VII secretion system ESX-2 subunit EccD2;locus_tag=GCA000153685_04094;product=type VII secretion system ESX-2 subunit EccD2;Dbxref=GO:0005886,GO:0009306,GO:0042783;gene=eccD2;Parent=GCA000153685_04094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003900775,RefSeq:WP_003900775.1,SO:0001217,UniParc:UPI00000C1517,UniRef:UniRef100_P9WNQ5,UniRef:UniRef50_P9WNQ5,UniRef:UniRef90_P9WNQ5
contig_1	Pyrodigal	gene	4368554	4369552	.	-	.	ID=GCA000153685_04095_gene;locus_tag=GCA000153685_04095
contig_1	Pyrodigal	CDS	4368554	4369552	.	-	0	ID=GCA000153685_04095;Name=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;locus_tag=GCA000153685_04095;product=CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein;Parent=GCA000153685_04095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001FB6B9B,UniRef:UniRef100_A5U9L6,UniRef:UniRef50_Q745F8,UniRef:UniRef90_R4MCD3
contig_1	Pyrodigal	gene	4369801	4370502	.	-	.	ID=GCA000153685_04096_gene;locus_tag=GCA000153685_04096;gene=espG2
contig_1	Pyrodigal	CDS	4369801	4370502	.	-	0	ID=GCA000153685_04096;Name=ESX-2 secretion-associated protein EspG2;locus_tag=GCA000153685_04096;product=ESX-2 secretion-associated protein EspG2;gene=espG2;Parent=GCA000153685_04096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27091,SO:0001217,UniRef:UniRef50_P9WJC9,UniRef:UniRef90_A0A0H3LG23
contig_1	Pyrodigal	gene	4370598	4370885	.	-	.	ID=GCA000153685_04097_gene;locus_tag=GCA000153685_04097;gene=esxC
contig_1	Pyrodigal	CDS	4370598	4370885	.	-	0	ID=GCA000153685_04097;Name=ESAT-6-like protein EsxC;locus_tag=GCA000153685_04097;product=ESAT-6-like protein EsxC;Dbxref=GO:0005576;gene=esxC;Parent=GCA000153685_04097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899750.1,SO:0001217,UniParc:UPI0000036DDE,UniRef:UniRef100_P9WNI1,UniRef:UniRef50_P9WNI1,UniRef:UniRef90_P9WNI1
contig_1	Pyrodigal	gene	4370921	4371244	.	-	.	ID=GCA000153685_04098_gene;locus_tag=GCA000153685_04098;gene=esxD
contig_1	Pyrodigal	CDS	4370921	4371244	.	-	0	ID=GCA000153685_04098;Name=ESAT-6-like protein EsxD;locus_tag=GCA000153685_04098;product=ESAT-6-like protein EsxD;Dbxref=GO:0005576;gene=esxD;Parent=GCA000153685_04098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899751.1,SO:0001217,UniParc:UPI0000036DDF,UniRef:UniRef100_O05453,UniRef:UniRef50_O05453,UniRef:UniRef90_O05453
contig_1	Pyrodigal	gene	4371356	4372486	.	-	.	ID=GCA000153685_04099_gene;locus_tag=GCA000153685_04099;gene=pPE69
contig_1	Pyrodigal	CDS	4371356	4372486	.	-	0	ID=GCA000153685_04099;Name=putative PPE family protein PPE69;locus_tag=GCA000153685_04099;product=putative PPE family protein PPE69;gene=pPE69;Parent=GCA000153685_04099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000127801B,UniRef:UniRef100_A0A0H3LH76,UniRef:UniRef50_P9WHW7,UniRef:UniRef90_P9WHW7
contig_1	Pyrodigal	gene	4372551	4372784	.	-	.	ID=GCA000153685_04100_gene;locus_tag=GCA000153685_04100
contig_1	Pyrodigal	CDS	4372551	4372784	.	-	0	ID=GCA000153685_04100;Name=PE family protein PE36;locus_tag=GCA000153685_04100;product=PE family protein PE36;Parent=GCA000153685_04100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400047.1,SO:0001217,UniParc:UPI00000D5F9C,UniRef:UniRef100_L7N660,UniRef:UniRef50_A0A7I7P3D1,UniRef:UniRef90_L7N660
contig_1	Pyrodigal	gene	4373051	4377241	.	-	.	ID=GCA000153685_04101_gene;locus_tag=GCA000153685_04101;gene=eccC2
contig_1	Pyrodigal	CDS	4373051	4377241	.	-	0	ID=GCA000153685_04101;Name=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;locus_tag=GCA000153685_04101;product=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;gene=eccC2;Parent=GCA000153685_04101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003917257,RefSeq:WP_003400060.1,SO:0001217,UniParc:UPI00001651FD,UniRef:UniRef100_A0A0H3LG29,UniRef:UniRef50_Q73RV7,UniRef:UniRef90_O05450
contig_1	Pyrodigal	gene	4377242	4378729	.	-	.	ID=GCA000153685_04102_gene;locus_tag=GCA000153685_04102;gene=eccB2
contig_1	Pyrodigal	CDS	4377242	4378729	.	-	0	ID=GCA000153685_04102;Name=type VII secretion system ESX-2 subunit EccB2;locus_tag=GCA000153685_04102;product=type VII secretion system ESX-2 subunit EccB2;Dbxref=GO:0005524,GO:0005886,GO:0009306,GO:0016787;gene=eccB2;Parent=GCA000153685_04102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400065,KEGG:K27085,RefSeq:WP_003400065.1,SO:0001217,UniParc:UPI00000D0F86,UniRef:UniRef100_P9WNR5,UniRef:UniRef50_P9WNR5,UniRef:UniRef90_P9WNR5;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	4378732	4379640	.	-	.	ID=GCA000153685_04103_gene;locus_tag=GCA000153685_04103
contig_1	Pyrodigal	CDS	4378732	4379640	.	-	0	ID=GCA000153685_04103;Name=Transglycosylase;locus_tag=GCA000153685_04103;product=Transglycosylase;Parent=GCA000153685_04103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899753.1,SO:0001217,UniParc:UPI00001651FE,UniRef:UniRef100_Q7D4N0,UniRef:UniRef50_Q73RV4,UniRef:UniRef90_O05448
contig_1	Pyrodigal	gene	4379790	4380434	.	-	.	ID=GCA000153685_04104_gene;locus_tag=GCA000153685_04104
contig_1	Pyrodigal	CDS	4379790	4380434	.	-	0	ID=GCA000153685_04104;Name=putative protein Rv2083;locus_tag=GCA000153685_04104;product=putative protein Rv2083;Parent=GCA000153685_04104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899754.1,SO:0001217,UniParc:UPI00000D2DE9,UniRef:UniRef100_O05447,UniRef:UniRef50_P9WLK3,UniRef:UniRef90_A0A8I0ER37
contig_1	Pyrodigal	gene	4380447	4380779	.	-	.	ID=GCA000153685_04105_gene;locus_tag=GCA000153685_04105
contig_1	Pyrodigal	CDS	4380447	4380779	.	-	0	ID=GCA000153685_04105;Name=putative protein Rv2083;locus_tag=GCA000153685_04105;product=putative protein Rv2083;Parent=GCA000153685_04105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900777.1,SO:0001217,UniParc:UPI00000D107D,UniRef:UniRef100_O05447,UniRef:UniRef50_P9WLK3,UniRef:UniRef90_A0A8I0ER37
contig_1	Pyrodigal	gene	4380941	4381657	.	-	.	ID=GCA000153685_04106_gene;locus_tag=GCA000153685_04106
contig_1	Pyrodigal	CDS	4380941	4381657	.	-	0	ID=GCA000153685_04106;Name=Tat (Twin-arginine translocation) pathway signal sequence containing protein;locus_tag=GCA000153685_04106;product=Tat (Twin-arginine translocation) pathway signal sequence containing protein;Parent=GCA000153685_04106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400072.1,SO:0001217,UniParc:UPI0001901292,UniRef:UniRef100_O05446,UniRef:UniRef50_O05446,UniRef:UniRef90_O05446
contig_1	Pyrodigal	gene	4381983	4382279	.	+	.	ID=GCA000153685_04107_gene;locus_tag=GCA000153685_04107
contig_1	Pyrodigal	CDS	4381983	4382279	.	+	0	ID=GCA000153685_04107;Name=hypothetical protein;locus_tag=GCA000153685_04107;product=hypothetical protein;Parent=GCA000153685_04107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001901940,UniRef:UniRef100_A0A074RA96,UniRef:UniRef50_A0A074RA96,UniRef:UniRef90_A0A074RA96
contig_1	Pyrodigal	gene	4382167	4383057	.	-	.	ID=GCA000153685_04108_gene;locus_tag=GCA000153685_04108
contig_1	Pyrodigal	CDS	4382167	4383057	.	-	0	ID=GCA000153685_04108;Name=Alanine rich protein;locus_tag=GCA000153685_04108;product=Alanine rich protein;Parent=GCA000153685_04108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0004E387F6,UniRef:UniRef100_A0A0E8VX28,UniRef:UniRef50_Q7D4M7,UniRef:UniRef90_Q7D4M7
contig_1	Pyrodigal	gene	4383159	4383512	.	-	.	ID=GCA000153685_04109_gene;locus_tag=GCA000153685_04109
contig_1	Pyrodigal	CDS	4383159	4383512	.	-	0	ID=GCA000153685_04109;Name=Transmembrane protein;locus_tag=GCA000153685_04109;product=Transmembrane protein;Parent=GCA000153685_04109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005F63BE,UniRef:UniRef100_A0A0H3LG35,UniRef:UniRef50_A0A0H3LG35,UniRef:UniRef90_A0A0H3LG35
contig_1	Pyrodigal	gene	4383641	4383781	.	+	.	ID=GCA000153685_04110_gene;locus_tag=GCA000153685_04110
contig_1	Pyrodigal	CDS	4383641	4383781	.	+	0	ID=GCA000153685_04110;Name=Secreted protein;locus_tag=GCA000153685_04110;product=Secreted protein;Parent=GCA000153685_04110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_014848126.1,SO:0001217,UniParc:UPI00026D42BB,UniRef:UniRef100_A0A655J4P2,UniRef:UniRef50_A0A655J4P2,UniRef:UniRef90_A0A655J4P2
contig_1	Pyrodigal	gene	4384159	4384689	.	-	.	ID=GCA000153685_04111_gene;locus_tag=GCA000153685_04111;gene=ift
contig_1	Pyrodigal	CDS	4384159	4384689	.	-	0	ID=GCA000153685_04111;Name=necrotizing toxin immunity factor IFT;locus_tag=GCA000153685_04111;product=necrotizing toxin immunity factor IFT;gene=ift;Parent=GCA000153685_04111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400086,RefSeq:WP_003400086.1,SO:0001217,UniParc:UPI00000D103E,UniRef:UniRef100_O05443,UniRef:UniRef50_O05443,UniRef:UniRef90_O05443
contig_1	Pyrodigal	gene	4384686	4387226	.	-	.	ID=GCA000153685_04112_gene;locus_tag=GCA000153685_04112;gene=cpnT
contig_1	Pyrodigal	CDS	4384686	4387226	.	-	0	ID=GCA000153685_04112;Name=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;locus_tag=GCA000153685_04112;product=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;Dbxref=GO:0001907,GO:0003953,GO:0005576,GO:0005829,GO:0006811,GO:0009274,GO:0009279,GO:0009986,GO:0015288,GO:0044164,GO:0046930,GO:0050135,GO:0061809,GO:0090729;gene=cpnT;Parent=GCA000153685_04112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003899759,RefSeq:WP_003899759.1,SO:0001217,UniParc:UPI00000D1153,UniRef:UniRef100_O05442,UniRef:UniRef50_O05442,UniRef:UniRef90_O05442
contig_1	Pyrodigal	gene	4387231	4387521	.	-	.	ID=GCA000153685_04113_gene;locus_tag=GCA000153685_04113;gene=esxE
contig_1	Pyrodigal	CDS	4387231	4387521	.	-	0	ID=GCA000153685_04113;Name=ESAT-6-like protein EsxE;locus_tag=GCA000153685_04113;product=ESAT-6-like protein EsxE;Dbxref=GO:0005576;gene=esxE;Parent=GCA000153685_04113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00005EE8FD,UniRef:UniRef100_A0A0H3LG38,UniRef:UniRef50_P9WNH9,UniRef:UniRef90_P9WNH9
contig_1	Pyrodigal	gene	4387514	4387825	.	-	.	ID=GCA000153685_04114_gene;locus_tag=GCA000153685_04114;gene=esxF
contig_1	Pyrodigal	CDS	4387514	4387825	.	-	0	ID=GCA000153685_04114;Name=ESAT-6-like protein EsxF;locus_tag=GCA000153685_04114;product=ESAT-6-like protein EsxF;Dbxref=GO:0005576;gene=esxF;Parent=GCA000153685_04114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400100.1,SO:0001217,UniParc:UPI0000036DE1,UniRef:UniRef100_P9WNH7,UniRef:UniRef50_P9WNH7,UniRef:UniRef90_P9WNH7
contig_1	Pyrodigal	gene	4387891	4388400	.	-	.	ID=GCA000153685_04115_gene;locus_tag=GCA000153685_04115
contig_1	Pyrodigal	CDS	4387891	4388400	.	-	0	ID=GCA000153685_04115;Name=Pullulanase;locus_tag=GCA000153685_04115;product=Pullulanase;Parent=GCA000153685_04115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400109.1,SO:0001217,UniParc:UPI00000D1065,UniRef:UniRef100_O05439,UniRef:UniRef50_L0J8G6,UniRef:UniRef90_O05439
contig_1	Pyrodigal	gene	4388425	4389867	.	-	.	ID=GCA000153685_04116_gene;locus_tag=GCA000153685_04116
contig_1	Pyrodigal	CDS	4388425	4389867	.	-	0	ID=GCA000153685_04116;Name=CCA tRNA nucleotidyltransferase;locus_tag=GCA000153685_04116;product=CCA tRNA nucleotidyltransferase;Dbxref=GO:0003723,GO:0006396,GO:0016779;Parent=GCA000153685_04116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00970,RefSeq:WP_003400120.1,SO:0001217,UniParc:UPI00000D118C,UniRef:UniRef100_A5U9N5,UniRef:UniRef50_A0A6H9YKH5,UniRef:UniRef90_A0AA44LS22;ec_number=2.7.7.72
contig_1	Pyrodigal	gene	4390327	4390989	.	+	.	ID=GCA000153685_04117_gene;locus_tag=GCA000153685_04117;gene=mutT4
contig_1	Pyrodigal	CDS	4390327	4390989	.	+	0	ID=GCA000153685_04117;Name=Putative mutator protein MutT4;locus_tag=GCA000153685_04117;product=Putative mutator protein MutT4;Dbxref=GO:0016787,GO:0046872;gene=mutT4;Parent=GCA000153685_04117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002D35BF8,UniRef:UniRef100_A0A0E8BBN4,UniRef:UniRef50_P9WIX7,UniRef:UniRef90_P9WIX7;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	4390986	4393394	.	+	.	ID=GCA000153685_04118_gene;locus_tag=GCA000153685_04118
contig_1	Pyrodigal	CDS	4390986	4393394	.	+	0	ID=GCA000153685_04118;Name=Secreted protein;locus_tag=GCA000153685_04118;product=Secreted protein;Parent=GCA000153685_04118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003900781.1,SO:0001217,UniParc:UPI00000C14F8,UniRef:UniRef100_O05436,UniRef:UniRef50_I4BRU1,UniRef:UniRef90_Q8VIQ9
contig_1	Pyrodigal	gene	4393391	4396945	.	+	.	ID=GCA000153685_04119_gene;locus_tag=GCA000153685_04119;gene=murJ
contig_1	Pyrodigal	CDS	4393391	4396945	.	+	0	ID=GCA000153685_04119;Name=murein biosynthesis integral membrane protein MurJ;locus_tag=GCA000153685_04119;product=murein biosynthesis integral membrane protein MurJ;Dbxref=GO:0005576,GO:0005886,GO:0008360,GO:0009252,GO:0015648,GO:0015836,GO:0034204;gene=murJ;Parent=GCA000153685_04119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_021036419.1,SO:0001217,UniParc:UPI0003AB4A99,UniRef:UniRef100_UPI0003AB4A99,UniRef:UniRef50_P9WJK3,UniRef:UniRef90_P9WJK3
contig_1	Pyrodigal	gene	4396980	4397570	.	+	.	ID=GCA000153685_04120_gene;locus_tag=GCA000153685_04120;gene=sigM
contig_1	Pyrodigal	CDS	4396980	4397570	.	+	0	ID=GCA000153685_04120;Name=RNA polymerase sigma factor SigM;locus_tag=GCA000153685_04120;product=RNA polymerase sigma factor SigM;Dbxref=GO:0003677,GO:0003700,GO:0005886,GO:0006352,GO:0006355,GO:0009410,GO:0009415,GO:0016987,GO:0045893;gene=sigM;Parent=GCA000153685_04120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003899761.1,SO:0001217,UniParc:UPI00000D2DEE,UniRef:UniRef100_H8F2P4,UniRef:UniRef50_O53590,UniRef:UniRef90_O53590
contig_1	Pyrodigal	gene	4397663	4398427	.	+	.	ID=GCA000153685_04121_gene;locus_tag=GCA000153685_04121;gene=rsmA
contig_1	Pyrodigal	CDS	4397663	4398427	.	+	0	ID=GCA000153685_04121;Name=anti-sigma-M factor RsmA;locus_tag=GCA000153685_04121;product=anti-sigma-M factor RsmA;Dbxref=GO:0005886;gene=rsmA;Parent=GCA000153685_04121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400148,RefSeq:WP_003400148.1,SO:0001217,UniParc:UPI00000D10CE,UniRef:UniRef100_P9WJ65,UniRef:UniRef50_P9WJ65,UniRef:UniRef90_P9WJ65
contig_1	Pyrodigal	gene	4398521	4399528	.	+	.	ID=GCA000153685_04122_gene;locus_tag=GCA000153685_04122;gene=trxB
contig_1	Pyrodigal	CDS	4398521	4399528	.	+	0	ID=GCA000153685_04122;Name=thioredoxin-disulfide reductase;locus_tag=GCA000153685_04122;product=thioredoxin-disulfide reductase;Dbxref=GO:0001666,GO:0004791,GO:0005737,GO:0005829,GO:0015035,GO:0019430,GO:0045454,GO:0050660,GO:0070402,GO:0071949;gene=trxB;Parent=GCA000153685_04122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00384,RefSeq:WP_003900782.1,SO:0001217,UniParc:UPI00001376CB,UniRef:UniRef100_P9WHH1,UniRef:UniRef50_P9WHH1,UniRef:UniRef90_P9WHH1;ec_number=1.8.1.9
contig_1	Pyrodigal	gene	4399525	4399875	.	+	.	ID=GCA000153685_04123_gene;locus_tag=GCA000153685_04123;gene=trxA
contig_1	Pyrodigal	CDS	4399525	4399875	.	+	0	ID=GCA000153685_04123;Name=thioredoxin;locus_tag=GCA000153685_04123;product=thioredoxin;Dbxref=GO:0005576,GO:0005737,GO:0005829,GO:0005886,GO:0009055,GO:0009274,GO:0015035,GO:0015036,GO:0015038,GO:0045454;gene=trxA;Parent=GCA000153685_04123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400164.1,SO:0001217,UniParc:UPI0000165202,UniRef:UniRef100_P9WG67,UniRef:UniRef50_P9WG67,UniRef:UniRef90_P9WG67
contig_1	Pyrodigal	gene	4399985	4401205	.	+	.	ID=GCA000153685_04124_gene;locus_tag=GCA000153685_04124;gene=cwlM
contig_1	Pyrodigal	CDS	4399985	4401205	.	+	0	ID=GCA000153685_04124;Name=N-acetylmuramoyl-L-alanine amidase CwlM;locus_tag=GCA000153685_04124;product=N-acetylmuramoyl-L-alanine amidase CwlM;Dbxref=GO:0008745,GO:0009253,GO:0016998,GO:0042597,GO:0071555;gene=cwlM;Parent=GCA000153685_04124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400168,COG:COG3409,COG:M,KEGG:K01448,RefSeq:WP_003400168.1,SO:0001217,UniParc:UPI00000D5F5A,UniRef:UniRef100_L7N653,UniRef:UniRef50_L7N653,UniRef:UniRef90_L7N653;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	4401226	4401960	.	-	.	ID=GCA000153685_04125_gene;locus_tag=GCA000153685_04125
contig_1	Pyrodigal	CDS	4401226	4401960	.	-	0	ID=GCA000153685_04125;Name=Acetyltransferase;locus_tag=GCA000153685_04125;product=Acetyltransferase;Parent=GCA000153685_04125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400171.1,SO:0001217,UniParc:UPI00000D1190,UniRef:UniRef100_O53594,UniRef:UniRef50_O53594,UniRef:UniRef90_O53594
contig_1	Pyrodigal	gene	4402250	4403284	.	-	.	ID=GCA000153685_04126_gene;locus_tag=GCA000153685_04126;gene=parB
contig_1	Pyrodigal	CDS	4402250	4403284	.	-	0	ID=GCA000153685_04126;Name=putative chromosome-partitioning protein ParB;locus_tag=GCA000153685_04126;product=putative chromosome-partitioning protein ParB;Dbxref=GO:0003677,GO:0005576,GO:0005694,GO:0005886,GO:0007059,GO:0045881,GO:0060187;gene=parB;Parent=GCA000153685_04126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_003400175.1,SO:0001217,UniParc:UPI000013132C,UniRef:UniRef100_P9WIJ9,UniRef:UniRef50_P9WIJ9,UniRef:UniRef90_P9WIJ9
contig_1	Pyrodigal	gene	4403281	4404324	.	-	.	ID=GCA000153685_04127_gene;locus_tag=GCA000153685_04127;gene=parA
contig_1	Pyrodigal	CDS	4403281	4404324	.	-	0	ID=GCA000153685_04127;Name=chromosome partitioning protein ParA;locus_tag=GCA000153685_04127;product=chromosome partitioning protein ParA;gene=parA;Parent=GCA000153685_04127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003400180,KEGG:K03496,RefSeq:WP_003400180.1,SO:0001217,UniParc:UPI0000165389,UniRef:UniRef100_A5U9P6,UniRef:UniRef50_A0A0J6VQR1,UniRef:UniRef90_A5U9P6
contig_1	Pyrodigal	gene	4404321	4404995	.	-	.	ID=GCA000153685_04128_gene;locus_tag=GCA000153685_04128;gene=rsmG
contig_1	Pyrodigal	CDS	4404321	4404995	.	-	0	ID=GCA000153685_04128;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000153685_04128;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0005886,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000153685_04128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03501,RefSeq:WP_003899763.1,SO:0001217,UniParc:UPI0000165203,UniRef:UniRef100_P9WGW9,UniRef:UniRef50_P9WGW9,UniRef:UniRef90_P9WGW9;ec_number=2.1.1.170
contig_1	Pyrodigal	gene	4405127	4405690	.	-	.	ID=GCA000153685_04129_gene;locus_tag=GCA000153685_04129
contig_1	Pyrodigal	CDS	4405127	4405690	.	-	0	ID=GCA000153685_04129;Name=Single-stranded DNA-binding protein;locus_tag=GCA000153685_04129;product=Single-stranded DNA-binding protein;Parent=GCA000153685_04129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06346,RefSeq:WP_003899764.1,SO:0001217,UniParc:UPI0000033283,UniRef:UniRef100_A5U9P8,UniRef:UniRef50_Q73RT3,UniRef:UniRef90_A0A8I0JYW1
contig_1	Pyrodigal	gene	4405762	4406862	.	-	.	ID=GCA000153685_04130_gene;locus_tag=GCA000153685_04130;gene=yidC
contig_1	Pyrodigal	CDS	4405762	4406862	.	-	0	ID=GCA000153685_04130;Name=membrane protein insertase YidC;locus_tag=GCA000153685_04130;product=membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0016020,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000153685_04130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03217,RefSeq:WP_003899765.1,SO:0001217,UniParc:UPI00000D5ED4,UniRef:UniRef100_P9WIT5,UniRef:UniRef50_Q50205,UniRef:UniRef90_P9WIT5