##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Staphylococcus aureus 55/2053
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 2756919
contig_1	Bakta	region	1	2756919	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
contig_1	Pyrodigal	gene	544	1905	.	+	.	ID=GCA000160335_00001_gene;locus_tag=GCA000160335_00001;gene=dnaA
contig_1	Pyrodigal	CDS	544	1905	.	+	0	ID=GCA000160335_00001;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000160335_00001;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887;gene=dnaA;Parent=GCA000160335_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,RefSeq:WP_001290430.1,SO:0001217,UniParc:UPI00003B12E0,UniRef:UniRef100_Q6GKU4,UniRef:UniRef50_Q2G2H5,UniRef:UniRef90_Q2G2H5;ec_number=3.6.4.-
contig_1	BLAST+	rep_origin	1917	2182	.	?	.	ID=HBCHLJIIAO_2763;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	2183	3316	.	+	.	ID=GCA000160335_00002_gene;locus_tag=GCA000160335_00002;gene=dnaN
contig_1	Pyrodigal	CDS	2183	3316	.	+	0	ID=GCA000160335_00002;Name=DNA polymerase III subunit beta;locus_tag=GCA000160335_00002;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009360;gene=dnaN;Parent=GCA000160335_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_000969811.1,SO:0001217,UniParc:UPI0000050CC9,UniRef:UniRef100_Q5HJZ4,UniRef:UniRef50_Q9RCA1,UniRef:UniRef90_Q5HK00;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3706	3942	.	+	.	ID=GCA000160335_00003_gene;locus_tag=GCA000160335_00003;gene=ybcJ
contig_1	Pyrodigal	CDS	3706	3942	.	+	0	ID=GCA000160335_00003;Name=S4 domain-containing protein YaaA;locus_tag=GCA000160335_00003;product=S4 domain-containing protein YaaA;gene=ybcJ;Parent=GCA000160335_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2501,COG:J,KEGG:K14761,RefSeq:WP_000249647.1,SO:0001217,UniParc:UPI00006E4540,UniRef:UniRef100_A0A7Z7QWA9,UniRef:UniRef50_A0A028ZHC3,UniRef:UniRef90_A0A7Z7YU32
contig_1	Pyrodigal	gene	3939	5051	.	+	.	ID=GCA000160335_00004_gene;locus_tag=GCA000160335_00004;gene=recF
contig_1	Pyrodigal	CDS	3939	5051	.	+	0	ID=GCA000160335_00004;Name=DNA replication/repair protein RecF;locus_tag=GCA000160335_00004;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000160335_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_000775113.1,SO:0001217,UniParc:UPI000005498D,UniRef:UniRef100_Q2G275,UniRef:UniRef50_Q9CE70,UniRef:UniRef90_Q2G275
contig_1	Pyrodigal	gene	5061	6995	.	+	.	ID=GCA000160335_00005_gene;locus_tag=GCA000160335_00005;gene=gyrB
contig_1	Pyrodigal	CDS	5061	6995	.	+	0	ID=GCA000160335_00005;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000160335_00005;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046872;gene=gyrB;Parent=GCA000160335_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_000255583.1,SO:0001217,UniParc:UPI0000ED915B,UniRef:UniRef100_Q6GKU0,UniRef:UniRef50_Q6GKU0,UniRef:UniRef90_Q6GKU0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	7032	9692	.	+	.	ID=GCA000160335_00006_gene;locus_tag=GCA000160335_00006;gene=gyrA
contig_1	Pyrodigal	CDS	7032	9692	.	+	0	ID=GCA000160335_00006;Name=DNA gyrase subunit A;locus_tag=GCA000160335_00006;product=DNA gyrase subunit A;Dbxref=GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006259,GO:0006261,GO:0006265,GO:0009330,GO:0034335,GO:0046677;gene=gyrA;Parent=GCA000160335_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_000819098.1,SO:0001217,UniParc:UPI00019CD5C0,UniRef:UniRef100_A0A7Z7QWW1,UniRef:UniRef50_Q2FKQ0,UniRef:UniRef90_Q2FKQ0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	9780	10592	.	-	.	ID=GCA000160335_00007_gene;locus_tag=GCA000160335_00007;gene=nnrD
contig_1	Pyrodigal	CDS	9780	10592	.	-	0	ID=GCA000160335_00007;Name=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;locus_tag=GCA000160335_00007;product=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;Dbxref=GO:0005524,GO:0046496,GO:0052855,GO:0052856,GO:0110051;gene=nnrD;Parent=GCA000160335_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0063,COG:F,RefSeq:WP_000449218.1,SO:0001217,UniParc:UPI00000D9B7B,UniRef:UniRef100_Q2G2P8,UniRef:UniRef50_Q2G2P8,UniRef:UniRef90_Q2G2P8;ec_number=4.2.1.136
contig_1	Pyrodigal	gene	10918	12432	.	+	.	ID=GCA000160335_00008_gene;locus_tag=GCA000160335_00008;gene=hutH
contig_1	Pyrodigal	CDS	10918	12432	.	+	0	ID=GCA000160335_00008;Name=histidine ammonia-lyase;locus_tag=GCA000160335_00008;product=histidine ammonia-lyase;Dbxref=GO:0004397,GO:0005737,GO:0006548,GO:0019556,GO:0019557;gene=hutH;Parent=GCA000160335_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2986,COG:E,KEGG:K01745,RefSeq:WP_000177483.1,SO:0001217,UniParc:UPI00003B12E3,UniRef:UniRef100_Q6GKT7,UniRef:UniRef50_P10944,UniRef:UniRef90_P64415;ec_number=4.3.1.3
contig_1	Infernal	regulatory_region	12505	12720	1.8e-15	+	.	ID=HBCHLJIIAO_154;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	12810	14096	.	+	.	ID=GCA000160335_00009_gene;locus_tag=GCA000160335_00009;gene=serS
contig_1	Pyrodigal	CDS	12810	14096	.	+	0	ID=GCA000160335_00009;Name=serine--tRNA ligase;locus_tag=GCA000160335_00009;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260,GO:0016740;gene=serS;Parent=GCA000160335_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,KEGG:K01875,RefSeq:WP_000884337.1,SO:0001217,UniParc:UPI00003B12E4,UniRef:UniRef100_Q6GKT6,UniRef:UniRef50_P95689,UniRef:UniRef90_P95689;ec_number=6.1.1.11
contig_1	Pyrodigal	gene	14740	15435	.	+	.	ID=GCA000160335_00010_gene;locus_tag=GCA000160335_00010;gene=azlC
contig_1	Pyrodigal	CDS	14740	15435	.	+	0	ID=GCA000160335_00010;Name=Branched-chain amino acid ABC transporter permease;locus_tag=GCA000160335_00010;product=Branched-chain amino acid ABC transporter permease;gene=azlC;Parent=GCA000160335_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1296,COG:E,KEGG:K26605,RefSeq:WP_000207101.1,SO:0001217,UniParc:UPI00003B12E5,UniRef:UniRef100_A0A7Z7W0M9,UniRef:UniRef50_Q2G2P6,UniRef:UniRef90_Q2G2P6
contig_1	Pyrodigal	gene	15432	15761	.	+	.	ID=GCA000160335_00011_gene;locus_tag=GCA000160335_00011;gene=azlD2
contig_1	Pyrodigal	CDS	15432	15761	.	+	0	ID=GCA000160335_00011;Name=AzlD domain-containing protein;locus_tag=GCA000160335_00011;product=AzlD domain-containing protein;gene=azlD2;Parent=GCA000160335_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4392,COG:E,RefSeq:WP_000628050.1,SO:0001217,UniParc:UPI0000054996,UniRef:UniRef100_Q2G2T5,UniRef:UniRef50_Q2G2T5,UniRef:UniRef90_Q2G2T5
contig_1	Infernal	regulatory_region	15966	16064	9.9e-14	+	.	ID=HBCHLJIIAO_160;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	16123	17091	.	+	.	ID=GCA000160335_00012_gene;locus_tag=GCA000160335_00012;gene=mET2
contig_1	Pyrodigal	CDS	16123	17091	.	+	0	ID=GCA000160335_00012;Name=Alpha/beta fold hydrolase;locus_tag=GCA000160335_00012;product=Alpha/beta fold hydrolase;gene=mET2;Parent=GCA000160335_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2021,COG:E,RefSeq:WP_000186482.1,SO:0001217,UniParc:UPI00003B12E6,UniRef:UniRef100_A0A7Z7W1I2,UniRef:UniRef50_A0A0Z4IRW6,UniRef:UniRef90_A0A0Z4IRW6
contig_1	Pyrodigal	gene	17399	18322	.	+	.	ID=GCA000160335_00013_gene;locus_tag=GCA000160335_00013;gene=yybS
contig_1	Pyrodigal	CDS	17399	18322	.	+	0	ID=GCA000160335_00013;Name=DUF2232 domain-containing protein;locus_tag=GCA000160335_00013;product=DUF2232 domain-containing protein;gene=yybS;Parent=GCA000160335_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4241,COG:S,SO:0001217,UniParc:UPI0001BE5C63,UniRef:UniRef100_A0A0Z1E5X0,UniRef:UniRef50_Q2G2T2,UniRef:UniRef90_Q2G2T2
contig_1	Pyrodigal	gene	18337	20304	.	+	.	ID=GCA000160335_00014_gene;locus_tag=GCA000160335_00014;gene=gdpP
contig_1	Pyrodigal	CDS	18337	20304	.	+	0	ID=GCA000160335_00014;Name=cyclic-di-AMP phosphodiesterase GdpP;locus_tag=GCA000160335_00014;product=cyclic-di-AMP phosphodiesterase GdpP;gene=gdpP;Parent=GCA000160335_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081643,BlastRules:WP_003242517,COG:COG3887,COG:T,KEGG:K22927,RefSeq:WP_001081643.1,SO:0001217,UniParc:UPI00000D9B80,UniRef:UniRef100_A0A0E1XKV6,UniRef:UniRef50_A0A389PUT3,UniRef:UniRef90_A0A389PUT3;ec_number=3.1.4.59
contig_1	Pyrodigal	gene	20301	20747	.	+	.	ID=GCA000160335_00015_gene;locus_tag=GCA000160335_00015;gene=rplI
contig_1	Pyrodigal	CDS	20301	20747	.	+	0	ID=GCA000160335_00015;Name=50S ribosomal protein L9;locus_tag=GCA000160335_00015;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplI;Parent=GCA000160335_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,RefSeq:WP_000864305.1,SO:0001217,UniParc:UPI0000134207,UniRef:UniRef100_Q2FKP1,UniRef:UniRef50_B9DPY3,UniRef:UniRef90_Q2FKP1
contig_1	Pyrodigal	gene	20779	22179	.	+	.	ID=GCA000160335_00016_gene;locus_tag=GCA000160335_00016;gene=dnaB
contig_1	Pyrodigal	CDS	20779	22179	.	+	0	ID=GCA000160335_00016;Name=replicative DNA helicase;locus_tag=GCA000160335_00016;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0005524,GO:0006260;gene=dnaB;Parent=GCA000160335_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,KEGG:K02314,RefSeq:WP_000375652.1,SO:0001217,UniParc:UPI000197AB98,UniRef:UniRef100_A0A113RDX4,UniRef:UniRef50_A0A5R9B465,UniRef:UniRef90_A0A5R9B465;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	22458	23741	.	+	.	ID=GCA000160335_00017_gene;locus_tag=GCA000160335_00017;gene=purA
contig_1	Pyrodigal	CDS	22458	23741	.	+	0	ID=GCA000160335_00017;Name=adenylosuccinate synthase;locus_tag=GCA000160335_00017;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040;gene=purA;Parent=GCA000160335_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_000095328.1,SO:0001217,UniParc:UPI0000132B0C,UniRef:UniRef100_P65884,UniRef:UniRef50_Q03ET4,UniRef:UniRef90_Q5HK16;ec_number=6.3.4.4
contig_1	tRNAscan-SE	gene	24171	24245	.	+	.	ID=GCA000160335_00018_gene;locus_tag=GCA000160335_00018;gene=trnE
contig_1	tRNAscan-SE	tRNA	24171	24245	.	+	.	ID=GCA000160335_00018;Name=tRNA-Glu(ttc);locus_tag=GCA000160335_00018;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000160335_00018_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	24253	24325	.	+	.	ID=GCA000160335_00019_gene;locus_tag=GCA000160335_00019;gene=trnD
contig_1	tRNAscan-SE	tRNA	24253	24325	.	+	.	ID=GCA000160335_00019;Name=tRNA-Asp(gtc);locus_tag=GCA000160335_00019;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000160335_00019_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	24931	25632	.	+	.	ID=GCA000160335_00020_gene;locus_tag=GCA000160335_00020;gene=yycF
contig_1	Pyrodigal	CDS	24931	25632	.	+	0	ID=GCA000160335_00020;Name=response regulator YycF;locus_tag=GCA000160335_00020;product=response regulator YycF;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=yycF;Parent=GCA000160335_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000101976.1,SO:0001217,UniParc:UPI00000D7820,UniRef:UniRef100_Q2G2U6,UniRef:UniRef50_P37478,UniRef:UniRef90_Q2G2U6
contig_1	Pyrodigal	gene	25645	27471	.	+	.	ID=GCA000160335_00021_gene;locus_tag=GCA000160335_00021;gene=walK
contig_1	Pyrodigal	CDS	25645	27471	.	+	0	ID=GCA000160335_00021;Name=cell wall metabolism sensor histidine kinase WalK;locus_tag=GCA000160335_00021;product=cell wall metabolism sensor histidine kinase WalK;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0006355,GO:0007165,GO:0007234,GO:0016020,GO:0016310,GO:0030295;gene=walK;Parent=GCA000160335_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,RefSeq:WP_000871601.1,SO:0001217,UniParc:UPI000197AB9B,UniRef:UniRef100_A0A658WF83,UniRef:UniRef50_Q2G2U4,UniRef:UniRef90_Q2G2U4;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	27464	28798	.	+	.	ID=GCA000160335_00022_gene;locus_tag=GCA000160335_00022;gene=yycH
contig_1	Pyrodigal	CDS	27464	28798	.	+	0	ID=GCA000160335_00022;Name=YycH protein;locus_tag=GCA000160335_00022;product=YycH protein;gene=yycH;Parent=GCA000160335_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060146.1,SO:0001217,UniParc:UPI00003B12EA,UniRef:UniRef100_A0A7Z7QW43,UniRef:UniRef90_A0A6B1RUA2
contig_1	Pyrodigal	gene	28799	29587	.	+	.	ID=GCA000160335_00023_gene;locus_tag=GCA000160335_00023;gene=yycI
contig_1	Pyrodigal	CDS	28799	29587	.	+	0	ID=GCA000160335_00023;Name=Regulatory protein YycH-like domain-containing protein;locus_tag=GCA000160335_00023;product=Regulatory protein YycH-like domain-containing protein;gene=yycI;Parent=GCA000160335_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4853,COG:T,RefSeq:WP_001104171.1,SO:0001217,UniParc:UPI00003B12EB,UniRef:UniRef100_A0A7Z7QWX1,UniRef:UniRef50_Q2G2U2,UniRef:UniRef90_Q2G2U2
contig_1	Pyrodigal	gene	29984	30775	.	+	.	ID=GCA000160335_00024_gene;locus_tag=GCA000160335_00024
contig_1	Pyrodigal	CDS	29984	30775	.	+	0	ID=GCA000160335_00024;Name=Zn-dependent hydrolase (Beta-lactamase superfamily);locus_tag=GCA000160335_00024;product=Zn-dependent hydrolase (Beta-lactamase superfamily);Parent=GCA000160335_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002506EF6,UniRef:UniRef100_A0A7Z7QWL5,UniRef:UniRef90_Q2G2U5
contig_1	Pyrodigal	gene	31002	33320	.	+	.	ID=GCA000160335_00025_gene;locus_tag=GCA000160335_00025;gene=adsA
contig_1	Pyrodigal	CDS	31002	33320	.	+	0	ID=GCA000160335_00025;Name=Adenosine synthase A;locus_tag=GCA000160335_00025;product=Adenosine synthase A;gene=adsA;Parent=GCA000160335_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000645754.1,SO:0001217,UniParc:UPI0001EFF106,UniRef:UniRef100_A0A0E1XAM9,UniRef:UniRef50_A0AAE8TKC7,UniRef:UniRef90_A0AAE8TKC7,VFDB:VFC0258,VFDB:VFG002420
contig_1	Pyrodigal	gene	33688	34167	.	+	.	ID=GCA000160335_00026_gene;locus_tag=GCA000160335_00026;gene=rlmH
contig_1	Pyrodigal	CDS	33688	34167	.	+	0	ID=GCA000160335_00026;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA000160335_00026;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA000160335_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,KEGG:K00783,RefSeq:WP_000704775.1,SO:0001217,UniParc:UPI0000006C89,UniRef:UniRef100_Q2G252,UniRef:UniRef50_Q45601,UniRef:UniRef90_Q2G252;ec_number=2.1.1.177
contig_1	Pyrodigal	gene	34287	36407	.	+	.	ID=GCA000160335_00027_gene;locus_tag=GCA000160335_00027
contig_1	Pyrodigal	CDS	34287	36407	.	+	0	ID=GCA000160335_00027;Name=putative chromosomal cassette SCCmec type IVc protein CR006;locus_tag=GCA000160335_00027;product=putative chromosomal cassette SCCmec type IVc protein CR006;Parent=GCA000160335_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000891228.1,SO:0001217,UniParc:UPI00001833E8,UniRef:UniRef100_Q6GKM5,UniRef:UniRef50_Q6GKM5,UniRef:UniRef90_Q6GKM5
contig_1	Pyrodigal	gene	36701	36937	.	+	.	ID=GCA000160335_00028_gene;locus_tag=GCA000160335_00028
contig_1	Pyrodigal	CDS	36701	36937	.	+	0	ID=GCA000160335_00028;Name=IS3 family transposase;locus_tag=GCA000160335_00028;product=IS3 family transposase;Parent=GCA000160335_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00025053FD,UniRef:UniRef100_Q84BP5,UniRef:UniRef50_Q2G0Y3,UniRef:UniRef90_A0A6B0B221
contig_1	Pyrodigal	gene	36979	37785	.	+	.	ID=GCA000160335_00029_gene;locus_tag=GCA000160335_00029
contig_1	Pyrodigal	CDS	36979	37785	.	+	0	ID=GCA000160335_00029;Name=IS3 family transposase;locus_tag=GCA000160335_00029;product=IS3 family transposase;Dbxref=GO:0004803;Parent=GCA000160335_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00001833E6,UniRef:UniRef100_A0A7Z7W1I7,UniRef:UniRef50_A0AAJ1GNA0,UniRef:UniRef90_A0A6B0B8Z6
contig_1	Pyrodigal	gene	37973	38488	.	+	.	ID=GCA000160335_00030_gene;locus_tag=GCA000160335_00030
contig_1	Pyrodigal	CDS	37973	38488	.	+	0	ID=GCA000160335_00030;Name=DUF2004 domain-containing protein;locus_tag=GCA000160335_00030;product=DUF2004 domain-containing protein;Parent=GCA000160335_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000370465.1,SO:0001217,UniParc:UPI00000AF562,UniRef:UniRef100_A0A7Z7QW91,UniRef:UniRef50_A0A7Z7QW91,UniRef:UniRef90_A0A7Z7QW91
contig_1	Pyrodigal	gene	38493	39440	.	-	.	ID=GCA000160335_00031_gene;locus_tag=GCA000160335_00031;gene=tnp
contig_1	Pyrodigal	CDS	38493	39440	.	-	0	ID=GCA000160335_00031;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_00031;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121211.1,SO:0001217,UniParc:UPI00001833E5,UniRef:UniRef100_Q9MBM9,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	39527	40000	.	+	.	ID=GCA000160335_00032_gene;locus_tag=GCA000160335_00032
contig_1	Pyrodigal	CDS	39527	40000	.	+	0	ID=GCA000160335_00032;Name=hypothetical protein;locus_tag=GCA000160335_00032;product=hypothetical protein;Parent=GCA000160335_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902830.1,SO:0001217,UniParc:UPI0001D16986,UniRef:UniRef100_A0A7Z7QW36,UniRef:UniRef50_Q93V03,UniRef:UniRef90_Q93V03
contig_1	Pyrodigal	gene	40290	41990	.	+	.	ID=GCA000160335_00033_gene;locus_tag=GCA000160335_00033
contig_1	Pyrodigal	CDS	40290	41990	.	+	0	ID=GCA000160335_00033;Name=Restriction enzyme;locus_tag=GCA000160335_00033;product=Restriction enzyme;Parent=GCA000160335_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000649665.1,SO:0001217,UniParc:UPI000197AB12,UniRef:UniRef100_A0A380DN39,UniRef:UniRef50_A0A380FWC6,UniRef:UniRef90_A0A2X2MA48
contig_1	Pyrodigal	gene	41983	43023	.	+	.	ID=GCA000160335_00034_gene;locus_tag=GCA000160335_00034;gene=mcrC
contig_1	Pyrodigal	CDS	41983	43023	.	+	0	ID=GCA000160335_00034;Name=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;locus_tag=GCA000160335_00034;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;Dbxref=GO:0009307;gene=mcrC;Parent=GCA000160335_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19147,RefSeq:WP_000608218.1,SO:0001217,UniParc:UPI0001B7026C,UniRef:UniRef100_UPI0001B7026C,UniRef:UniRef50_A0AAW9XHV6,UniRef:UniRef90_A0AAW9XHV6;ec_number=3.1.21.-
contig_1	Pyrodigal	gene	43454	43612	.	+	.	ID=GCA000160335_00035_gene;locus_tag=GCA000160335_00035;gene=mazE
contig_1	Pyrodigal	CDS	43454	43612	.	+	0	ID=GCA000160335_00035;Name=Antitoxin MazE;locus_tag=GCA000160335_00035;product=Antitoxin MazE;gene=mazE;Parent=GCA000160335_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000628287.1,SO:0001217,UniParc:UPI00003B12FA,UniRef:UniRef100_A0A7Z7QWC6,UniRef:UniRef50_A0A654CHF6,UniRef:UniRef90_A0A0N9R1S7
contig_1	Pyrodigal	gene	44451	45422	.	-	.	ID=GCA000160335_00036_gene;locus_tag=GCA000160335_00036
contig_1	Pyrodigal	CDS	44451	45422	.	-	0	ID=GCA000160335_00036;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000160335_00036;product=Amidohydrolase-related domain-containing protein;Parent=GCA000160335_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000140908.1,SO:0001217,UniParc:UPI00031BD101,UniRef:UniRef100_UPI00031BD101,UniRef:UniRef50_A0A1B1UYH5,UniRef:UniRef90_A0A1B1UYH5
contig_1	Pyrodigal	gene	45475	45846	.	-	.	ID=GCA000160335_00037_gene;locus_tag=GCA000160335_00037;gene=doxX
contig_1	Pyrodigal	CDS	45475	45846	.	-	0	ID=GCA000160335_00037;Name=DoxX family protein;locus_tag=GCA000160335_00037;product=DoxX family protein;gene=doxX;Parent=GCA000160335_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000926750.1,SO:0001217,UniParc:UPI00003B12FD,UniRef:UniRef100_A0A7Z7QW51,UniRef:UniRef50_S2XC77,UniRef:UniRef90_A0A654CP70
contig_1	Pyrodigal	gene	45866	47257	.	-	.	ID=GCA000160335_00038_gene;locus_tag=GCA000160335_00038;gene=norB
contig_1	Pyrodigal	CDS	45866	47257	.	-	0	ID=GCA000160335_00038;Name=Quinolone resistance protein NorB;locus_tag=GCA000160335_00038;product=Quinolone resistance protein NorB;gene=norB;Parent=GCA000160335_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001246796.1,SO:0001217,UniParc:UPI000197AB11,UniRef:UniRef100_A0A660A2D9,UniRef:UniRef50_A0A9N8F6U1,UniRef:UniRef90_A0A9N8F6U1
contig_1	Pyrodigal	gene	47371	47574	.	+	.	ID=GCA000160335_00039_gene;locus_tag=GCA000160335_00039
contig_1	Pyrodigal	CDS	47371	47574	.	+	0	ID=GCA000160335_00039;Name=Acetyltransferase;locus_tag=GCA000160335_00039;product=Acetyltransferase;Parent=GCA000160335_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000786141.1,SO:0001217,UniParc:UPI000197AB10,UniRef:UniRef100_A0A7Z7QWM7,UniRef:UniRef50_A0A0U1MSE6,UniRef:UniRef90_A0A0U1MSE6
contig_1	Pyrodigal	gene	47584	47949	.	+	.	ID=GCA000160335_00040_gene;locus_tag=GCA000160335_00040
contig_1	Pyrodigal	CDS	47584	47949	.	+	0	ID=GCA000160335_00040;Name=Acetyltransferase;locus_tag=GCA000160335_00040;product=Acetyltransferase;Parent=GCA000160335_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001016371.1,SO:0001217,UniParc:UPI00019CD552,UniRef:UniRef100_A0A7Z7W0E4,UniRef:UniRef50_A0A5S9C388,UniRef:UniRef90_A0A5S9C388
contig_1	Pyrodigal	gene	48224	48799	.	+	.	ID=GCA000160335_00041_gene;locus_tag=GCA000160335_00041
contig_1	Pyrodigal	CDS	48224	48799	.	+	0	ID=GCA000160335_00041;Name=HTH-type transcriptional regulator SAR0097;locus_tag=GCA000160335_00041;product=HTH-type transcriptional regulator SAR0097;Dbxref=GO:0003677;Parent=GCA000160335_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414485.1,SO:0001217,UniParc:UPI00003B12FF,UniRef:UniRef100_Q6GKL1,UniRef:UniRef50_Q6GKL1,UniRef:UniRef90_Q6GKL1
contig_1	Pyrodigal	gene	49269	49742	.	+	.	ID=GCA000160335_00042_gene;locus_tag=GCA000160335_00042
contig_1	Pyrodigal	CDS	49269	49742	.	+	0	ID=GCA000160335_00042;Name=Acetyltransferase;locus_tag=GCA000160335_00042;product=Acetyltransferase;Parent=GCA000160335_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000455978.1,SO:0001217,UniParc:UPI00003B1300,UniRef:UniRef100_A0A7Z7W0N7,UniRef:UniRef50_A0A077ULV6,UniRef:UniRef90_A0A077ULV6
contig_1	Pyrodigal	gene	49849	50835	.	-	.	ID=GCA000160335_00043_gene;locus_tag=GCA000160335_00043;gene=dus
contig_1	Pyrodigal	CDS	49849	50835	.	-	0	ID=GCA000160335_00043;Name=putative tRNA-dihydrouridine synthase;locus_tag=GCA000160335_00043;product=putative tRNA-dihydrouridine synthase;Dbxref=GO:0000049,GO:0017150,GO:0050660;gene=dus;Parent=GCA000160335_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_000662027.1,SO:0001217,UniParc:UPI00003B1301,UniRef:UniRef100_Q6GKK9,UniRef:UniRef50_O31546,UniRef:UniRef90_Q5HJT5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	51144	51239	.	+	.	ID=GCA000160335_00044_gene;locus_tag=GCA000160335_00044
contig_1	Pyrodigal	CDS	51144	51239	.	+	0	ID=GCA000160335_00044;Name=hypothetical protein;locus_tag=GCA000160335_00044;product=hypothetical protein;Parent=GCA000160335_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C0B76B,UniRef:UniRef100_A0A7Z7W1J2,UniRef:UniRef50_A0A7Z7W1J2,UniRef:UniRef90_A0A7Z7W1J2
contig_1	Pyrodigal	gene	51394	51690	.	+	.	ID=GCA000160335_00045_gene;locus_tag=GCA000160335_00045;gene=tfoX
contig_1	Pyrodigal	CDS	51394	51690	.	+	0	ID=GCA000160335_00045;Name=TfoX N-terminal domain protein;locus_tag=GCA000160335_00045;product=TfoX N-terminal domain protein;gene=tfoX;Parent=GCA000160335_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000179900.1,SO:0001217,UniParc:UPI00003B1303,UniRef:UniRef100_A0A0E1XCT3,UniRef:UniRef50_Q2G1R1,UniRef:UniRef90_A0A0U1MU10
contig_1	Pyrodigal	gene	51898	52500	.	+	.	ID=GCA000160335_00046_gene;locus_tag=GCA000160335_00046
contig_1	Pyrodigal	CDS	51898	52500	.	+	0	ID=GCA000160335_00046;Name=DUF5079 domain-containing protein;locus_tag=GCA000160335_00046;product=DUF5079 domain-containing protein;Parent=GCA000160335_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000908950.1,SO:0001217,UniParc:UPI000197AB0C,UniRef:UniRef100_A0A7U7ET65,UniRef:UniRef50_A0A6G4N7I9,UniRef:UniRef90_A0A6G4N7I9
contig_1	Pyrodigal	gene	52768	55920	.	+	.	ID=GCA000160335_00047_gene;locus_tag=GCA000160335_00047;gene=dNA2
contig_1	Pyrodigal	CDS	52768	55920	.	+	0	ID=GCA000160335_00047;Name=RecBCD enzyme subunit RecD;locus_tag=GCA000160335_00047;product=RecBCD enzyme subunit RecD;gene=dNA2;Parent=GCA000160335_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1112,COG:L,RefSeq:WP_000080572.1,SO:0001217,UniParc:UPI000197AB0B,UniRef:UniRef100_A0A0Z0Q2U3,UniRef:UniRef50_Q4A109,UniRef:UniRef90_A0A6N3FDN4
contig_1	Pyrodigal	gene	56003	56485	.	+	.	ID=GCA000160335_00048_gene;locus_tag=GCA000160335_00048
contig_1	Pyrodigal	CDS	56003	56485	.	+	0	ID=GCA000160335_00048;Name=DUF3278 domain-containing protein;locus_tag=GCA000160335_00048;product=DUF3278 domain-containing protein;Parent=GCA000160335_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000714376.1,SO:0001217,UniParc:UPI00003B1306,UniRef:UniRef100_A0A131HR00,UniRef:UniRef50_Q2G1Q3,UniRef:UniRef90_Q2G1Q3
contig_1	Pyrodigal	gene	56690	57676	.	+	.	ID=GCA000160335_00049_gene;locus_tag=GCA000160335_00049;gene=plc
contig_1	Pyrodigal	CDS	56690	57676	.	+	0	ID=GCA000160335_00049;Name=1-phosphatidylinositol phosphodiesterase;locus_tag=GCA000160335_00049;product=1-phosphatidylinositol phosphodiesterase;Dbxref=GO:0004436,GO:0005576,GO:0008081,GO:0016042;gene=plc;Parent=GCA000160335_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000710549.1,SO:0001217,UniParc:UPI00003B1307,UniRef:UniRef100_A0A7Z7QW37,UniRef:UniRef50_Q2G1Q2,UniRef:UniRef90_Q2G1Q2;ec_number=4.6.1.13
contig_1	Pyrodigal	gene	57897	58667	.	+	.	ID=GCA000160335_00050_gene;locus_tag=GCA000160335_00050
contig_1	Pyrodigal	CDS	57897	58667	.	+	0	ID=GCA000160335_00050;Name=putative lipoprotein SAR0106;locus_tag=GCA000160335_00050;product=putative lipoprotein SAR0106;Dbxref=GO:0005886;Parent=GCA000160335_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977786.1,SO:0001217,UniParc:UPI000197AB0A,UniRef:UniRef100_A0A0Y9VX67,UniRef:UniRef50_Q2G1Q1,UniRef:UniRef90_Q6GKK2
contig_1	Pyrodigal	gene	58761	60998	.	+	.	ID=GCA000160335_00051_gene;locus_tag=GCA000160335_00051;gene=aryK
contig_1	Pyrodigal	CDS	58761	60998	.	+	0	ID=GCA000160335_00051;Name=transcriptional regulator AryK;locus_tag=GCA000160335_00051;product=transcriptional regulator AryK;Dbxref=GO:0003700,GO:0043565;gene=aryK;Parent=GCA000160335_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3664,COG:G,RefSeq:WP_001188463.1,SO:0001217,UniParc:UPI00003B1309,UniRef:UniRef100_Q6GKK1,UniRef:UniRef50_Q5HJR8,UniRef:UniRef90_Q5HJR8
contig_1	Pyrodigal	gene	61149	62327	.	+	.	ID=GCA000160335_00052_gene;locus_tag=GCA000160335_00052;gene=abgB
contig_1	Pyrodigal	CDS	61149	62327	.	+	0	ID=GCA000160335_00052;Name=Peptidase M20 dimerisation domain-containing protein;locus_tag=GCA000160335_00052;product=Peptidase M20 dimerisation domain-containing protein;gene=abgB;Parent=GCA000160335_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001075804.1,SO:0001217,UniParc:UPI000197A88D,UniRef:UniRef100_A0A0E1XC64,UniRef:UniRef50_A0A380FVH8,UniRef:UniRef90_Q2G1P6
contig_1	Pyrodigal	gene	62329	63717	.	+	.	ID=GCA000160335_00053_gene;locus_tag=GCA000160335_00053;gene=uhpC
contig_1	Pyrodigal	CDS	62329	63717	.	+	0	ID=GCA000160335_00053;Name=Quinolone resistance protein NorB;locus_tag=GCA000160335_00053;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000160335_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001006427.1,SO:0001217,UniParc:UPI00003B130B,UniRef:UniRef100_A0A7Z7QWY9,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q9F0Z2
contig_1	Pyrodigal	gene	64203	65870	.	-	.	ID=GCA000160335_00054_gene;locus_tag=GCA000160335_00054;gene=nptA
contig_1	Pyrodigal	CDS	64203	65870	.	-	0	ID=GCA000160335_00054;Name=PhoU domain-containing protein;locus_tag=GCA000160335_00054;product=PhoU domain-containing protein;gene=nptA;Parent=GCA000160335_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1283,COG:P,SO:0001217,UniParc:UPI00003B130C,UniRef:UniRef100_A0A162FIL5,UniRef:UniRef50_Q2G1P4,UniRef:UniRef90_Q2G1P4
contig_1	Pyrodigal	gene	66190	67965	.	-	.	ID=GCA000160335_00055_gene;locus_tag=GCA000160335_00055
contig_1	Pyrodigal	CDS	66190	67965	.	-	0	ID=GCA000160335_00055;Name=oleate hydratase;locus_tag=GCA000160335_00055;product=oleate hydratase;Dbxref=GO:0006631,GO:0050151,GO:0071949;Parent=GCA000160335_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4716,COG:S,RefSeq:WP_000291843.1,SO:0001217,UniParc:UPI0001B7028B,UniRef:UniRef100_UPI0001B7028B,UniRef:UniRef50_B5XK69,UniRef:UniRef90_Q2G1P3;ec_number=4.2.1.53
contig_1	Pyrodigal	gene	68316	68789	.	+	.	ID=GCA000160335_00056_gene;locus_tag=GCA000160335_00056
contig_1	Pyrodigal	CDS	68316	68789	.	+	0	ID=GCA000160335_00056;Name=DUF1648 domain-containing protein;locus_tag=GCA000160335_00056;product=DUF1648 domain-containing protein;Parent=GCA000160335_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036329.1,SO:0001217,UniParc:UPI00000D9BA6,UniRef:UniRef100_A0A7Z7W0I9,UniRef:UniRef50_Q2G1P0,UniRef:UniRef90_Q2G1P0
contig_1	Pyrodigal	gene	69051	70643	.	+	.	ID=GCA000160335_00057_gene;locus_tag=GCA000160335_00057;gene=lldP
contig_1	Pyrodigal	CDS	69051	70643	.	+	0	ID=GCA000160335_00057;Name=L-lactate permease;locus_tag=GCA000160335_00057;product=L-lactate permease;gene=lldP;Parent=GCA000160335_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K03303,RefSeq:WP_000173891.1,SO:0001217,UniParc:UPI00000CAADD,UniRef:UniRef100_A0A7Z7W0P4,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2K4AMZ7
contig_1	Pyrodigal	gene	70972	72300	.	-	.	ID=GCA000160335_00058_gene;locus_tag=GCA000160335_00058;gene=spa
contig_1	Pyrodigal	CDS	70972	72300	.	-	0	ID=GCA000160335_00058;Name=staphylococcal protein A;locus_tag=GCA000160335_00058;product=staphylococcal protein A;gene=spa;Parent=GCA000160335_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000728764,BlastRules:WP_039643602,BlastRules:WP_050329707,BlastRules:WP_050345001,BlastRules:WP_075773664,BlastRules:WP_083328546,BlastRules:WP_088808460,KEGG:K14196,SO:0001217,UniRef:UniRef50_L7Z971,UniRef:UniRef90_UPI00069CBB78
contig_1	Pyrodigal	gene	72721	73473	.	-	.	ID=GCA000160335_00059_gene;locus_tag=GCA000160335_00059;gene=sarS
contig_1	Pyrodigal	CDS	72721	73473	.	-	0	ID=GCA000160335_00059;Name=HTH-type transcriptional regulator SarS;locus_tag=GCA000160335_00059;product=HTH-type transcriptional regulator SarS;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=sarS;Parent=GCA000160335_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876756,COG:COG1846,COG:K,RefSeq:WP_000876758.1,SO:0001217,UniParc:UPI00003B130F,UniRef:UniRef100_Q6GKJ3,UniRef:UniRef50_Q2G1N7,UniRef:UniRef90_Q2G1N7
contig_1	Pyrodigal	gene	73842	74840	.	-	.	ID=GCA000160335_00060_gene;locus_tag=GCA000160335_00060;gene=fepD
contig_1	Pyrodigal	CDS	73842	74840	.	-	0	ID=GCA000160335_00060;Name=staphyloferrin B ABC transporter permease subunit SirC;locus_tag=GCA000160335_00060;product=staphyloferrin B ABC transporter permease subunit SirC;gene=fepD;Parent=GCA000160335_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000136636,COG:COG0609,COG:P,RefSeq:WP_000136645.1,SO:0001217,UniParc:UPI00003B1310,UniRef:UniRef100_A0A7Z7QWA8,UniRef:UniRef50_A0A389V9I4,UniRef:UniRef90_A0A389V9I4
contig_1	Pyrodigal	gene	74837	75832	.	-	.	ID=GCA000160335_00061_gene;locus_tag=GCA000160335_00061;gene=fepD
contig_1	Pyrodigal	CDS	74837	75832	.	-	0	ID=GCA000160335_00061;Name=staphyloferrin B ABC transporter permease subunit SirB;locus_tag=GCA000160335_00061;product=staphyloferrin B ABC transporter permease subunit SirB;gene=fepD;Parent=GCA000160335_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000925002,COG:COG0609,COG:P,RefSeq:WP_000925002.1,SO:0001217,UniParc:UPI00003B1311,UniRef:UniRef100_A0A7Z7QWR4,UniRef:UniRef50_A0A0H2WZW5,UniRef:UniRef90_A0A0H2WZW5
contig_1	Pyrodigal	gene	75848	76840	.	-	.	ID=GCA000160335_00062_gene;locus_tag=GCA000160335_00062;gene=fepB
contig_1	Pyrodigal	CDS	75848	76840	.	-	0	ID=GCA000160335_00062;Name=staphyloferrin B ABC transporter substrate-binding protein SirA;locus_tag=GCA000160335_00062;product=staphyloferrin B ABC transporter substrate-binding protein SirA;gene=fepB;Parent=GCA000160335_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001045111,COG:COG0614,COG:P,RefSeq:WP_001045124.1,SO:0001217,UniParc:UPI00003B1312,UniRef:UniRef100_A0A0E1XAJ4,UniRef:UniRef50_S2XE72,UniRef:UniRef90_A0A7U7IE32
contig_1	Pyrodigal	gene	77071	78051	.	+	.	ID=GCA000160335_00063_gene;locus_tag=GCA000160335_00063;gene=sbnA
contig_1	Pyrodigal	CDS	77071	78051	.	+	0	ID=GCA000160335_00063;Name=2%2C3-diaminopropionate biosynthesis protein SbnA;locus_tag=GCA000160335_00063;product=2%2C3-diaminopropionate biosynthesis protein SbnA;Dbxref=GO:0006535,GO:0009058,GO:0016765,GO:0030170;gene=sbnA;Parent=GCA000160335_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000570808,COG:COG0031,COG:E,RefSeq:WP_000570808.1,SO:0001217,UniParc:UPI00000D7883,UniRef:UniRef100_Q2G1N3,UniRef:UniRef50_Q2G1N3,UniRef:UniRef90_Q2G1N3;ec_number=2.5.1.140
contig_1	Pyrodigal	gene	78048	79058	.	+	.	ID=GCA000160335_00064_gene;locus_tag=GCA000160335_00064;gene=sbnB
contig_1	Pyrodigal	CDS	78048	79058	.	+	0	ID=GCA000160335_00064;Name=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;locus_tag=GCA000160335_00064;product=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;Dbxref=GO:0016491,GO:0016639,GO:0019290;gene=sbnB;Parent=GCA000160335_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001078456,COG:COG2423,COG:E,KEGG:K21721,RefSeq:WP_001078457.1,SO:0001217,UniParc:UPI00003B1313,UniRef:UniRef100_A0A7Z7QW47,UniRef:UniRef50_Q2G1N2,UniRef:UniRef90_Q2G1N2;ec_number=1.5.1.51
contig_1	Pyrodigal	gene	79079	80833	.	+	.	ID=GCA000160335_00065_gene;locus_tag=GCA000160335_00065;gene=sbnC
contig_1	Pyrodigal	CDS	79079	80833	.	+	0	ID=GCA000160335_00065;Name=staphyloferrin B biosynthesis protein SbnC;locus_tag=GCA000160335_00065;product=staphyloferrin B biosynthesis protein SbnC;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnC;Parent=GCA000160335_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4264,COG:P,KEGG:K23375,RefSeq:WP_001179395.1,SO:0001217,UniParc:UPI00003B1314,UniRef:UniRef100_A0A7Z7QWE6,UniRef:UniRef50_Q2G1N1,UniRef:UniRef90_Q2G1N1;ec_number=6.3.2.56
contig_1	Pyrodigal	gene	80826	82082	.	+	.	ID=GCA000160335_00066_gene;locus_tag=GCA000160335_00066;gene=sbnD
contig_1	Pyrodigal	CDS	80826	82082	.	+	0	ID=GCA000160335_00066;Name=staphyloferrin B export MFS transporter;locus_tag=GCA000160335_00066;product=staphyloferrin B export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sbnD;Parent=GCA000160335_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000572580,COG:COG2814,COG:G,KEGG:K23361,RefSeq:WP_000610053.1,SO:0001217,UniParc:UPI00003B1315,UniRef:UniRef100_A0A7Z7QWT4,UniRef:UniRef50_Q2G1N0,UniRef:UniRef90_Q2G1N0
contig_1	Pyrodigal	gene	82072	83808	.	+	.	ID=GCA000160335_00067_gene;locus_tag=GCA000160335_00067;gene=sbnE
contig_1	Pyrodigal	CDS	82072	83808	.	+	0	ID=GCA000160335_00067;Name=L-2%2C3-diaminopropanoate--citrate ligase SbnE;locus_tag=GCA000160335_00067;product=L-2%2C3-diaminopropanoate--citrate ligase SbnE;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnE;Parent=GCA000160335_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001179886,COG:COG4264,COG:P,KEGG:K23372,RefSeq:WP_001179895.1,SO:0001217,UniParc:UPI000197A9EE,UniRef:UniRef100_A0A7Z7QW73,UniRef:UniRef50_Q2G1M9,UniRef:UniRef90_Q2G1M9;ec_number=6.3.2.54
contig_1	Pyrodigal	gene	83789	85567	.	+	.	ID=GCA000160335_00068_gene;locus_tag=GCA000160335_00068;gene=sbnF
contig_1	Pyrodigal	CDS	83789	85567	.	+	0	ID=GCA000160335_00068;Name=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;locus_tag=GCA000160335_00068;product=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnF;Parent=GCA000160335_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001795559,COG:COG4264,COG:P,KEGG:K23374,SO:0001217,UniParc:UPI000197A9ED,UniRef:UniRef100_A0A7Z7QWZ5,UniRef:UniRef50_Q2G1M8,UniRef:UniRef90_Q2G1M8;ec_number=6.3.2.55
contig_1	Pyrodigal	gene	85542	86318	.	+	.	ID=GCA000160335_00069_gene;locus_tag=GCA000160335_00069;gene=sbnG
contig_1	Pyrodigal	CDS	85542	86318	.	+	0	ID=GCA000160335_00069;Name=staphyloferrin B biosynthesis citrate synthase SbnG;locus_tag=GCA000160335_00069;product=staphyloferrin B biosynthesis citrate synthase SbnG;gene=sbnG;Parent=GCA000160335_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001549999,COG:COG3836,COG:G,RefSeq:WP_001186805.1,SO:0001217,UniParc:UPI00003B1318,UniRef:UniRef100_A0A7Z7QWP8,UniRef:UniRef50_Q2G1M7,UniRef:UniRef90_Q2G1M7
contig_1	Pyrodigal	gene	86318	87520	.	+	.	ID=GCA000160335_00070_gene;locus_tag=GCA000160335_00070;gene=sbnH
contig_1	Pyrodigal	CDS	86318	87520	.	+	0	ID=GCA000160335_00070;Name=staphyloferrin B biosynthesis decarboxylase SbnH;locus_tag=GCA000160335_00070;product=staphyloferrin B biosynthesis decarboxylase SbnH;Dbxref=GO:0006596,GO:0008836,GO:0009089,GO:0016831,GO:0019290;gene=sbnH;Parent=GCA000160335_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001223700,COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_001223717.1,SO:0001217,UniParc:UPI00003B1319,UniRef:UniRef100_A0A7Z7W0F3,UniRef:UniRef50_Q2G1M6,UniRef:UniRef90_Q2G1M6;ec_number=4.1.1.117
contig_1	Pyrodigal	gene	87524	88288	.	+	.	ID=GCA000160335_00071_gene;locus_tag=GCA000160335_00071;gene=sbnI
contig_1	Pyrodigal	CDS	87524	88288	.	+	0	ID=GCA000160335_00071;Name=L-serine kinase SbnI;locus_tag=GCA000160335_00071;product=L-serine kinase SbnI;Dbxref=GO:0003677,GO:0005524,GO:0005694,GO:0007059,GO:0016301,GO:0016773,GO:0019290,GO:0045881;gene=sbnI;Parent=GCA000160335_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001015549,COG:COG1475,COG:D,KEGG:K23371,RefSeq:WP_001015549.1,SO:0001217,UniParc:UPI00000D772E,UniRef:UniRef100_Q2G1M5,UniRef:UniRef50_Q2G1M5,UniRef:UniRef90_Q2G1M5;ec_number=2.7.1.225
contig_1	Pyrodigal	gene	88484	89110	.	+	.	ID=GCA000160335_00072_gene;locus_tag=GCA000160335_00072
contig_1	Pyrodigal	CDS	88484	89110	.	+	0	ID=GCA000160335_00072;Name=MFS transporter;locus_tag=GCA000160335_00072;product=MFS transporter;Parent=GCA000160335_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414632.1,SO:0001217,UniParc:UPI00003B131A,UniRef:UniRef100_A0A7Z7W0P9,UniRef:UniRef50_Q2G1M2,UniRef:UniRef90_Q2G1M2
contig_1	Pyrodigal	gene	89321	90097	.	+	.	ID=GCA000160335_00073_gene;locus_tag=GCA000160335_00073;gene=butA
contig_1	Pyrodigal	CDS	89321	90097	.	+	0	ID=GCA000160335_00073;Name=(S)-acetoin forming diacetyl reductase;locus_tag=GCA000160335_00073;product=(S)-acetoin forming diacetyl reductase;Dbxref=GO:0019152,GO:0045150,GO:0052588;gene=butA;Parent=GCA000160335_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000183771.1,SO:0001217,UniParc:UPI00000D7675,UniRef:UniRef100_Q5HJP2,UniRef:UniRef50_Q5HJP2,UniRef:UniRef90_Q5HJP2;ec_number=1.1.1.304
contig_1	Pyrodigal	gene	90441	91412	.	+	.	ID=GCA000160335_00074_gene;locus_tag=GCA000160335_00074;gene=wcaG
contig_1	Pyrodigal	CDS	90441	91412	.	+	0	ID=GCA000160335_00074;Name=NAD-dependent dehydratase;locus_tag=GCA000160335_00074;product=NAD-dependent dehydratase;gene=wcaG;Parent=GCA000160335_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,SO:0001217,UniParc:UPI00003B131C,UniRef:UniRef100_A0A7Z7W1J8,UniRef:UniRef50_Q2MGY5,UniRef:UniRef90_Q2MGY5
contig_1	Pyrodigal	gene	91375	92064	.	+	.	ID=GCA000160335_00075_gene;locus_tag=GCA000160335_00075;gene=wcaJ
contig_1	Pyrodigal	CDS	91375	92064	.	+	0	ID=GCA000160335_00075;Name=Bacterial sugar transferase domain-containing protein;locus_tag=GCA000160335_00075;product=Bacterial sugar transferase domain-containing protein;gene=wcaJ;Parent=GCA000160335_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2148,COG:M,RefSeq:WP_000736089.1,SO:0001217,UniParc:UPI000197A9EB,UniRef:UniRef100_A0A7Z7QWB8,UniRef:UniRef50_Q2G287,UniRef:UniRef90_Q2G287
contig_1	Pyrodigal	gene	92274	93440	.	+	.	ID=GCA000160335_00076_gene;locus_tag=GCA000160335_00076;gene=rfaB
contig_1	Pyrodigal	CDS	92274	93440	.	+	0	ID=GCA000160335_00076;Name=Exopolysaccharide biosynthesis glycosyltransferase EpsF;locus_tag=GCA000160335_00076;product=Exopolysaccharide biosynthesis glycosyltransferase EpsF;gene=rfaB;Parent=GCA000160335_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000692497.1,SO:0001217,UniParc:UPI000197A9EA,UniRef:UniRef100_A0A7Z7QWS0,UniRef:UniRef50_A0AAJ4YWB0,UniRef:UniRef90_A0AAJ4YWB0
contig_1	Pyrodigal	gene	93421	94659	.	+	.	ID=GCA000160335_00077_gene;locus_tag=GCA000160335_00077
contig_1	Pyrodigal	CDS	93421	94659	.	+	0	ID=GCA000160335_00077;Name=O-antigen ligase-related domain-containing protein;locus_tag=GCA000160335_00077;product=O-antigen ligase-related domain-containing protein;Parent=GCA000160335_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431241.1,SO:0001217,UniParc:UPI00003B131F,UniRef:UniRef100_A0A166PWR3,UniRef:UniRef50_Q2G288,UniRef:UniRef90_A0A0H2WZU5
contig_1	Pyrodigal	gene	94649	96079	.	+	.	ID=GCA000160335_00078_gene;locus_tag=GCA000160335_00078;gene=rfbX
contig_1	Pyrodigal	CDS	94649	96079	.	+	0	ID=GCA000160335_00078;Name=Polysaccharide biosynthesis protein C-terminal domain-containing protein;locus_tag=GCA000160335_00078;product=Polysaccharide biosynthesis protein C-terminal domain-containing protein;gene=rfbX;Parent=GCA000160335_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2244,COG:M,RefSeq:WP_000834095.1,SO:0001217,UniParc:UPI000197A9E9,UniRef:UniRef100_A0A7Z7QW58,UniRef:UniRef50_Q2G262,UniRef:UniRef90_Q2G262
contig_1	Pyrodigal	gene	96347	96946	.	+	.	ID=GCA000160335_00079_gene;locus_tag=GCA000160335_00079;gene=sodM
contig_1	Pyrodigal	CDS	96347	96946	.	+	0	ID=GCA000160335_00079;Name=Superoxide dismutase [Mn/Fe] 2;locus_tag=GCA000160335_00079;product=Superoxide dismutase [Mn/Fe] 2;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodM;Parent=GCA000160335_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000874681.1,SO:0001217,UniParc:UPI0000054701,UniRef:UniRef100_Q2G261,UniRef:UniRef50_Q2G261,UniRef:UniRef90_Q2G261;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	97315	97980	.	+	.	ID=GCA000160335_00080_gene;locus_tag=GCA000160335_00080;gene=sasD
contig_1	Pyrodigal	CDS	97315	97980	.	+	0	ID=GCA000160335_00080;Name=Cell-wall-anchored protein SasD;locus_tag=GCA000160335_00080;product=Cell-wall-anchored protein SasD;gene=sasD;Parent=GCA000160335_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1321,UniRef:UniRef100_A0A7Z7QWU4,UniRef:UniRef50_Q2G260,UniRef:UniRef90_A0A6B0CXZ7
contig_1	Pyrodigal	gene	98082	98822	.	-	.	ID=GCA000160335_00081_gene;locus_tag=GCA000160335_00081;gene=mngR
contig_1	Pyrodigal	CDS	98082	98822	.	-	0	ID=GCA000160335_00081;Name=GntR family transcriptional regulator;locus_tag=GCA000160335_00081;product=GntR family transcriptional regulator;gene=mngR;Parent=GCA000160335_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,SO:0001217,UniParc:UPI00003B1322,UniRef:UniRef100_A0A7Z7QW87,UniRef:UniRef50_S2XH22,UniRef:UniRef90_A0A380DIC9
contig_1	Pyrodigal	gene	99073	99780	.	+	.	ID=GCA000160335_00082_gene;locus_tag=GCA000160335_00082;gene=deoD
contig_1	Pyrodigal	CDS	99073	99780	.	+	0	ID=GCA000160335_00082;Name=purine-nucleoside phosphorylase;locus_tag=GCA000160335_00082;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000160335_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000843296.1,SO:0001217,UniParc:UPI00003B1323,UniRef:UniRef100_A0A7Z7QX05,UniRef:UniRef50_Q894Z3,UniRef:UniRef90_Q2G228;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	99781	101139	.	+	.	ID=GCA000160335_00083_gene;locus_tag=GCA000160335_00083;gene=tet(38)
contig_1	Pyrodigal	CDS	99781	101139	.	+	0	ID=GCA000160335_00083;Name=tetracycline efflux MFS transporter Tet(38);locus_tag=GCA000160335_00083;product=tetracycline efflux MFS transporter Tet(38);Dbxref=GO:0008493,GO:0015904;gene=tet(38);Parent=GCA000160335_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08168,NCBIProtein:WP_001100289.1,SO:0001217,UniParc:UPI0001E0C620,UniRef:UniRef100_A0A658WD55,UniRef:UniRef50_A0A658WD55,UniRef:UniRef90_A0A658WD55
contig_1	Pyrodigal	gene	101220	101882	.	+	.	ID=GCA000160335_00084_gene;locus_tag=GCA000160335_00084;gene=deoC
contig_1	Pyrodigal	CDS	101220	101882	.	+	0	ID=GCA000160335_00084;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000160335_00084;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000160335_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,KEGG:K01619,RefSeq:WP_000667286.1,SO:0001217,UniParc:UPI00003B1325,UniRef:UniRef100_Q6GKG7,UniRef:UniRef50_Q6GKG7,UniRef:UniRef90_Q6GKG7;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	101910	103088	.	+	.	ID=GCA000160335_00085_gene;locus_tag=GCA000160335_00085;gene=deoB
contig_1	Pyrodigal	CDS	101910	103088	.	+	0	ID=GCA000160335_00085;Name=phosphopentomutase;locus_tag=GCA000160335_00085;product=phosphopentomutase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0006015,GO:0006018,GO:0008973,GO:0009117,GO:0030145,GO:0043094;gene=deoB;Parent=GCA000160335_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1015,COG:G,RefSeq:WP_000197806.1,SO:0001217,UniParc:UPI00000D773B,UniRef:UniRef100_Q2G227,UniRef:UniRef50_Q8DQD0,UniRef:UniRef90_Q2G227;ec_number=5.4.2.7
contig_1	Pyrodigal	gene	103219	104034	.	-	.	ID=GCA000160335_00086_gene;locus_tag=GCA000160335_00086;gene=phnE
contig_1	Pyrodigal	CDS	103219	104034	.	-	0	ID=GCA000160335_00086;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000160335_00086;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000160335_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_000191133.1,SO:0001217,UniParc:UPI00003B1326,UniRef:UniRef100_A0A7Z7W0Q4,UniRef:UniRef50_A0A7Z1N8X5,UniRef:UniRef90_A0A2K4ALN9;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	104031	104831	.	-	.	ID=GCA000160335_00087_gene;locus_tag=GCA000160335_00087;gene=phnE
contig_1	Pyrodigal	CDS	104031	104831	.	-	0	ID=GCA000160335_00087;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000160335_00087;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000160335_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_001127863.1,SO:0001217,UniParc:UPI00000D9BBB,UniRef:UniRef100_A0A7Z7W0F0,UniRef:UniRef50_E3EAH8,UniRef:UniRef90_A0A0Z4EPE7;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	104833	105606	.	-	.	ID=GCA000160335_00088_gene;locus_tag=GCA000160335_00088;gene=phnC
contig_1	Pyrodigal	CDS	104833	105606	.	-	0	ID=GCA000160335_00088;Name=phosphonate ABC transporter ATP-binding protein;locus_tag=GCA000160335_00088;product=phosphonate ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015416,GO:0015716,GO:0016020,GO:0016887;gene=phnC;Parent=GCA000160335_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3638,COG:P,RefSeq:WP_000078278.1,SO:0001217,UniParc:UPI00003B1327,UniRef:UniRef100_Q6GKG3,UniRef:UniRef50_Q2G1L8,UniRef:UniRef90_Q2G1L8;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	105820	106776	.	-	.	ID=GCA000160335_00089_gene;locus_tag=GCA000160335_00089;gene=phnD
contig_1	Pyrodigal	CDS	105820	106776	.	-	0	ID=GCA000160335_00089;Name=Phosphonate ABC transporter phosphate-binding periplasmic component;locus_tag=GCA000160335_00089;product=Phosphonate ABC transporter phosphate-binding periplasmic component;gene=phnD;Parent=GCA000160335_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3221,COG:P,KEGG:K02044,RefSeq:WP_000787672.1,SO:0001217,UniParc:UPI00000546F6,UniRef:UniRef100_Q2G1L7,UniRef:UniRef50_D3EDC2,UniRef:UniRef90_A0A077UPS7
contig_1	Pyrodigal	gene	107005	108549	.	+	.	ID=GCA000160335_00090_gene;locus_tag=GCA000160335_00090
contig_1	Pyrodigal	CDS	107005	108549	.	+	0	ID=GCA000160335_00090;Name=DNA-binding protein;locus_tag=GCA000160335_00090;product=DNA-binding protein;Parent=GCA000160335_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000790531.1,SO:0001217,UniParc:UPI00003B1328,UniRef:UniRef100_A0A166DWI7,UniRef:UniRef50_Q2G1L6,UniRef:UniRef90_Q2G1L6
contig_1	Pyrodigal	gene	108600	110135	.	+	.	ID=GCA000160335_00091_gene;locus_tag=GCA000160335_00091;gene=ushA
contig_1	Pyrodigal	CDS	108600	110135	.	+	0	ID=GCA000160335_00091;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA000160335_00091;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;gene=ushA;Parent=GCA000160335_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000065044.1,SO:0001217,UniParc:UPI000197AAFB,UniRef:UniRef100_A0A7Z7QWE2,UniRef:UniRef50_A0A390ZG35,UniRef:UniRef90_A0A390ZG35
contig_1	Pyrodigal	gene	110283	111059	.	+	.	ID=GCA000160335_00092_gene;locus_tag=GCA000160335_00092
contig_1	Pyrodigal	CDS	110283	111059	.	+	0	ID=GCA000160335_00092;Name=Cytosolic protein;locus_tag=GCA000160335_00092;product=Cytosolic protein;Parent=GCA000160335_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD4A3,UniRef:UniRef100_A0A7Z7QW66,UniRef:UniRef50_A0A6A9GQ09,UniRef:UniRef90_A0A6A9GQ09
contig_1	Pyrodigal	gene	111065	112240	.	+	.	ID=GCA000160335_00093_gene;locus_tag=GCA000160335_00093;gene=immA
contig_1	Pyrodigal	CDS	111065	112240	.	+	0	ID=GCA000160335_00093;Name=ImmA/IrrE family metallo-endopeptidase;locus_tag=GCA000160335_00093;product=ImmA/IrrE family metallo-endopeptidase;gene=immA;Parent=GCA000160335_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2856,COG:O,RefSeq:WP_000469818.1,SO:0001217,UniParc:UPI00003B132B,UniRef:UniRef100_A0A7Z7QWG6,UniRef:UniRef50_A0A380G485,UniRef:UniRef90_A0A390TWT6
contig_1	Pyrodigal	gene	112626	115235	.	+	.	ID=GCA000160335_00094_gene;locus_tag=GCA000160335_00094;gene=adhE
contig_1	Pyrodigal	CDS	112626	115235	.	+	0	ID=GCA000160335_00094;Name=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;locus_tag=GCA000160335_00094;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;Dbxref=GO:0004022,GO:0006066,GO:0015976,GO:0016620,GO:0046872;gene=adhE;Parent=GCA000160335_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,RefSeq:WP_000955797.1,SO:0001217,UniParc:UPI00003B132C,UniRef:UniRef100_A0A7Z7QWV4,UniRef:UniRef50_A0A0H2ZM56,UniRef:UniRef90_A0A0U1MVV5;ec_number=1.2.1.10
contig_1	Pyrodigal	gene	115581	116249	.	+	.	ID=GCA000160335_00095_gene;locus_tag=GCA000160335_00095;gene=capA
contig_1	Pyrodigal	CDS	115581	116249	.	+	0	ID=GCA000160335_00095;Name=capsular polysaccharide type 5/8 biosynthesis protein CapA;locus_tag=GCA000160335_00095;product=capsular polysaccharide type 5/8 biosynthesis protein CapA;Dbxref=GO:0000271,GO:0004713,GO:0005351,GO:0005886,GO:0015774;gene=capA;Parent=GCA000160335_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000446300,COG:COG3944,COG:M,RefSeq:WP_000446303.1,SO:0001217,UniParc:UPI000197AAD8,UniRef:UniRef100_A0A0Y9S402,UniRef:UniRef50_P72367,UniRef:UniRef90_P72367
contig_1	Pyrodigal	gene	116265	116951	.	+	.	ID=GCA000160335_00096_gene;locus_tag=GCA000160335_00096;gene=cap8B
contig_1	Pyrodigal	CDS	116265	116951	.	+	0	ID=GCA000160335_00096;Name=type 8 capsular polysaccharide synthesis protein Cap8B;locus_tag=GCA000160335_00096;product=type 8 capsular polysaccharide synthesis protein Cap8B;gene=cap8B;Parent=GCA000160335_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000037328,COG:COG0489,COG:D,RefSeq:WP_000037321.1,SO:0001217,UniParc:UPI000197AAD9,UniRef:UniRef100_A0A0Y9AUF9,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ8
contig_1	Pyrodigal	gene	116954	117718	.	+	.	ID=GCA000160335_00097_gene;locus_tag=GCA000160335_00097;gene=cap8C
contig_1	Pyrodigal	CDS	116954	117718	.	+	0	ID=GCA000160335_00097;Name=type 8 capsular polysaccharide synthesis protein Cap8C;locus_tag=GCA000160335_00097;product=type 8 capsular polysaccharide synthesis protein Cap8C;gene=cap8C;Parent=GCA000160335_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000565297,COG:COG4464,COG:T,RefSeq:WP_000565300.1,SO:0001217,UniParc:UPI000197AADA,UniRef:UniRef100_A0A7Z7QWS1,UniRef:UniRef50_P72369,UniRef:UniRef90_P72369
contig_1	Pyrodigal	gene	117738	119561	.	+	.	ID=GCA000160335_00098_gene;locus_tag=GCA000160335_00098;gene=cap8D
contig_1	Pyrodigal	CDS	117738	119561	.	+	0	ID=GCA000160335_00098;Name=type 8 capsular polysaccharide synthesis protein Cap8D;locus_tag=GCA000160335_00098;product=type 8 capsular polysaccharide synthesis protein Cap8D;gene=cap8D;Parent=GCA000160335_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000940793,COG:COG1086,COG:MO,RefSeq:WP_000940769.1,SO:0001217,UniParc:UPI000197AB45,UniRef:UniRef100_A0A0E1XCN0,UniRef:UniRef50_P39853,UniRef:UniRef90_A0AAE8PB03
contig_1	Pyrodigal	gene	119551	120579	.	+	.	ID=GCA000160335_00099_gene;locus_tag=GCA000160335_00099;gene=cap8E
contig_1	Pyrodigal	CDS	119551	120579	.	+	0	ID=GCA000160335_00099;Name=type 8 capsular polysaccharide synthesis protein Cap8E;locus_tag=GCA000160335_00099;product=type 8 capsular polysaccharide synthesis protein Cap8E;gene=cap8E;Parent=GCA000160335_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000459062,COG:COG1086,COG:MO,KEGG:K15894,RefSeq:WP_000459068.1,SO:0001217,UniParc:UPI000197AADB,UniRef:UniRef100_A0A0Y9S337,UniRef:UniRef50_P95699,UniRef:UniRef90_A0A0Y9S337;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	120592	121701	.	+	.	ID=GCA000160335_00100_gene;locus_tag=GCA000160335_00100;gene=cap8F
contig_1	Pyrodigal	CDS	120592	121701	.	+	0	ID=GCA000160335_00100;Name=type 8 capsular polysaccharide synthesis protein Cap8F;locus_tag=GCA000160335_00100;product=type 8 capsular polysaccharide synthesis protein Cap8F;gene=cap8F;Parent=GCA000160335_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001028293,COG:COG1898,COG:M,KEGG:K19068,RefSeq:WP_001028294.1,SO:0001217,UniParc:UPI00003B1331,UniRef:UniRef100_A0A7Z7W0Q8,UniRef:UniRef50_A0A1V4SI62,UniRef:UniRef90_A0A390ZI88;ec_number=1.1.1.367
contig_1	Pyrodigal	gene	121705	122829	.	+	.	ID=GCA000160335_00101_gene;locus_tag=GCA000160335_00101;gene=cap8G
contig_1	Pyrodigal	CDS	121705	122829	.	+	0	ID=GCA000160335_00101;Name=type 8 capsular polysaccharide synthesis protein Cap8G;locus_tag=GCA000160335_00101;product=type 8 capsular polysaccharide synthesis protein Cap8G;Dbxref=GO:0008761;gene=cap8G;Parent=GCA000160335_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413169,COG:COG0381,COG:M,KEGG:K24258,RefSeq:WP_000413167.1,SO:0001217,UniParc:UPI00003B1332,UniRef:UniRef100_A0A7Z7W0F4,UniRef:UniRef50_A0A9X2B7Q1,UniRef:UniRef90_A0A077UEL0;ec_number=5.1.3.28
contig_1	Pyrodigal	gene	122832	123911	.	+	.	ID=GCA000160335_00102_gene;locus_tag=GCA000160335_00102;gene=cap8H
contig_1	Pyrodigal	CDS	122832	123911	.	+	0	ID=GCA000160335_00102;Name=type 8 capsular polysaccharide synthesis protein Cap8H;locus_tag=GCA000160335_00102;product=type 8 capsular polysaccharide synthesis protein Cap8H;gene=cap8H;Parent=GCA000160335_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001216935,RefSeq:WP_001216937.1,SO:0001217,UniParc:UPI00003B1333,UniRef:UniRef100_A0A0E1XKL7,UniRef:UniRef50_A0A0E1XKL7,UniRef:UniRef90_A0A0E1XKL7
contig_1	Pyrodigal	gene	123904	125298	.	+	.	ID=GCA000160335_00103_gene;locus_tag=GCA000160335_00103;gene=cap8I
contig_1	Pyrodigal	CDS	123904	125298	.	+	0	ID=GCA000160335_00103;Name=type 8 capsular polysaccharide synthesis protein Cap8I;locus_tag=GCA000160335_00103;product=type 8 capsular polysaccharide synthesis protein Cap8I;gene=cap8I;Parent=GCA000160335_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001034053,RefSeq:WP_001034059.1,SO:0001217,UniParc:UPI00003B1334,UniRef:UniRef100_A0A7Z7QWD9,UniRef:UniRef50_P72375,UniRef:UniRef90_P72375
contig_1	Pyrodigal	gene	125295	125852	.	+	.	ID=GCA000160335_00104_gene;locus_tag=GCA000160335_00104;gene=cap8J
contig_1	Pyrodigal	CDS	125295	125852	.	+	0	ID=GCA000160335_00104;Name=type 8 capsular polysaccharide synthesis protein Cap8J;locus_tag=GCA000160335_00104;product=type 8 capsular polysaccharide synthesis protein Cap8J;gene=cap8J;Parent=GCA000160335_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000636149,RefSeq:WP_000636151.1,SO:0001217,UniParc:UPI00000B68A3,UniRef:UniRef100_A0A7Z7QWU3,UniRef:UniRef50_G7V8Z9,UniRef:UniRef90_A0A2U0I9Y5
contig_1	Pyrodigal	gene	125861	127099	.	+	.	ID=GCA000160335_00105_gene;locus_tag=GCA000160335_00105;gene=cap8K
contig_1	Pyrodigal	CDS	125861	127099	.	+	0	ID=GCA000160335_00105;Name=type 8 capsular polysaccharide synthesis protein Cap8K;locus_tag=GCA000160335_00105;product=type 8 capsular polysaccharide synthesis protein Cap8K;gene=cap8K;Parent=GCA000160335_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001238807,RefSeq:WP_001238813.1,SO:0001217,UniParc:UPI00003B1335,UniRef:UniRef100_A0A7Z7QW82,UniRef:UniRef50_A0A853V073,UniRef:UniRef90_P72377
contig_1	Pyrodigal	gene	127133	128338	.	+	.	ID=GCA000160335_00106_gene;locus_tag=GCA000160335_00106;gene=cap8L
contig_1	Pyrodigal	CDS	127133	128338	.	+	0	ID=GCA000160335_00106;Name=type 8 capsular polysaccharide synthesis protein Cap8L;locus_tag=GCA000160335_00106;product=type 8 capsular polysaccharide synthesis protein Cap8L;gene=cap8L;Parent=GCA000160335_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001291010,COG:COG0438,COG:M,KEGG:K03208,RefSeq:WP_001291014.1,SO:0001217,UniParc:UPI00003B1336,UniRef:UniRef100_A0A7Z7QWF3,UniRef:UniRef50_P95705,UniRef:UniRef90_P95705
contig_1	Pyrodigal	gene	128349	128906	.	+	.	ID=GCA000160335_00107_gene;locus_tag=GCA000160335_00107;gene=cap8M
contig_1	Pyrodigal	CDS	128349	128906	.	+	0	ID=GCA000160335_00107;Name=type 8 capsular polysaccharide synthesis protein Cap8M;locus_tag=GCA000160335_00107;product=type 8 capsular polysaccharide synthesis protein Cap8M;gene=cap8M;Parent=GCA000160335_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825101,COG:COG2148,COG:M,KEGG:K13012,RefSeq:WP_000825097.1,SO:0001217,UniParc:UPI00003B1337,UniRef:UniRef100_A0A7Z7QW76,UniRef:UniRef50_A0A2D7LN21,UniRef:UniRef90_A0A7U7JS51
contig_1	Pyrodigal	gene	128906	129793	.	+	.	ID=GCA000160335_00108_gene;locus_tag=GCA000160335_00108;gene=capN
contig_1	Pyrodigal	CDS	128906	129793	.	+	0	ID=GCA000160335_00108;Name=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;locus_tag=GCA000160335_00108;product=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;gene=capN;Parent=GCA000160335_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001230668,COG:COG0451,COG:M,RefSeq:WP_001230690.1,SO:0001217,UniParc:UPI00003B1338,UniRef:UniRef100_A0A7Z7QWH8,UniRef:UniRef50_A0A390B3T4,UniRef:UniRef90_P95707
contig_1	Pyrodigal	gene	129847	131109	.	+	.	ID=GCA000160335_00109_gene;locus_tag=GCA000160335_00109;gene=cap8O
contig_1	Pyrodigal	CDS	129847	131109	.	+	0	ID=GCA000160335_00109;Name=type 8 capsular polysaccharide synthesis protein Cap8O;locus_tag=GCA000160335_00109;product=type 8 capsular polysaccharide synthesis protein Cap8O;gene=cap8O;Parent=GCA000160335_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779494,COG:COG0677,COG:M,KEGG:K02472,RefSeq:WP_000779509.1,SO:0001217,UniParc:UPI00003B1339,UniRef:UniRef100_A0A7Z7QWW3,UniRef:UniRef50_A0A239ZQS7,UniRef:UniRef90_A0A9N8IHJ7;ec_number=1.1.1.336
contig_1	Pyrodigal	gene	131186	132331	.	+	.	ID=GCA000160335_00110_gene;locus_tag=GCA000160335_00110;gene=cap8P
contig_1	Pyrodigal	CDS	131186	132331	.	+	0	ID=GCA000160335_00110;Name=type 8 capsular polysaccharide synthesis protein Cap8P;locus_tag=GCA000160335_00110;product=type 8 capsular polysaccharide synthesis protein Cap8P;Dbxref=GO:0008761;gene=cap8P;Parent=GCA000160335_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723452,COG:COG0381,COG:M,RefSeq:WP_000723445.1,SO:0001217,UniParc:UPI000197AADD,UniRef:UniRef100_A0A0E1XC12,UniRef:UniRef50_A0A847MAJ7,UniRef:UniRef90_A0AAE8PBV8;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	132396	132722	.	-	.	ID=GCA000160335_00111_gene;locus_tag=GCA000160335_00111;gene=isdI
contig_1	Pyrodigal	CDS	132396	132722	.	-	0	ID=GCA000160335_00111;Name=staphylobilin-forming heme oxygenase IsdI;locus_tag=GCA000160335_00111;product=staphylobilin-forming heme oxygenase IsdI;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdI;Parent=GCA000160335_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000480603,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000480605.1,SO:0001217,UniParc:UPI00003B133B,UniRef:UniRef100_Q6GKE0,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2G1J2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	132729	133112	.	-	.	ID=GCA000160335_00112_gene;locus_tag=GCA000160335_00112;gene=ybaN
contig_1	Pyrodigal	CDS	132729	133112	.	-	0	ID=GCA000160335_00112;Name=DUF454 domain-containing protein;locus_tag=GCA000160335_00112;product=DUF454 domain-containing protein;gene=ybaN;Parent=GCA000160335_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_001237003.1,SO:0001217,UniParc:UPI00003B133C,UniRef:UniRef100_A0A7Z7QWT7,UniRef:UniRef50_Q2G1J1,UniRef:UniRef90_Q2G1J1
contig_1	Pyrodigal	gene	133539	135026	.	+	.	ID=GCA000160335_00113_gene;locus_tag=GCA000160335_00113;gene=aldA
contig_1	Pyrodigal	CDS	133539	135026	.	+	0	ID=GCA000160335_00113;Name=Putative aldehyde dehydrogenase AldA;locus_tag=GCA000160335_00113;product=Putative aldehyde dehydrogenase AldA;Dbxref=GO:0004029;gene=aldA;Parent=GCA000160335_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000290401.1,SO:0001217,UniParc:UPI00003B133D,UniRef:UniRef100_Q6GKD8,UniRef:UniRef50_Q2G1J0,UniRef:UniRef90_Q2G1J0;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	135673	136632	.	+	.	ID=GCA000160335_00114_gene;locus_tag=GCA000160335_00114;gene=czcD
contig_1	Pyrodigal	CDS	135673	136632	.	+	0	ID=GCA000160335_00114;Name=Cation transporter;locus_tag=GCA000160335_00114;product=Cation transporter;gene=czcD;Parent=GCA000160335_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1230,COG:P,RefSeq:WP_001013473.1,SO:0001217,UniParc:UPI000197AAFC,UniRef:UniRef100_A0A0Y9A9K0,UniRef:UniRef50_Q2G1I9,UniRef:UniRef90_Q2G1I9
contig_1	Pyrodigal	gene	136694	136897	.	-	.	ID=GCA000160335_00115_gene;locus_tag=GCA000160335_00115
contig_1	Pyrodigal	CDS	136694	136897	.	-	0	ID=GCA000160335_00115;Name=hypothetical protein;locus_tag=GCA000160335_00115;product=hypothetical protein;Parent=GCA000160335_00115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356967.1,SO:0001217,UniParc:UPI00003B133F,UniRef:UniRef100_A0A7Z7W0R3,UniRef:UniRef50_Q2G1I8,UniRef:UniRef90_Q2G1I8
contig_1	Pyrodigal	gene	137077	137589	.	+	.	ID=GCA000160335_00116_gene;locus_tag=GCA000160335_00116
contig_1	Pyrodigal	CDS	137077	137589	.	+	0	ID=GCA000160335_00116;Name=DUF4242 domain-containing protein;locus_tag=GCA000160335_00116;product=DUF4242 domain-containing protein;Parent=GCA000160335_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171925.1,SO:0001217,UniParc:UPI0001B702B7,UniRef:UniRef100_UPI0001B702B7,UniRef:UniRef50_A0A0A8JHF4,UniRef:UniRef90_Q2G1I7
contig_1	Pyrodigal	gene	137931	138671	.	+	.	ID=GCA000160335_00117_gene;locus_tag=GCA000160335_00117;gene=tauB
contig_1	Pyrodigal	CDS	137931	138671	.	+	0	ID=GCA000160335_00117;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00117;product=ABC transporter ATP-binding protein;gene=tauB;Parent=GCA000160335_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1116,COG:P,RefSeq:WP_000590842.1,SO:0001217,UniParc:UPI000197AAFD,UniRef:UniRef100_A0A0U1MVC7,UniRef:UniRef50_A0A0U1MVC7,UniRef:UniRef90_A0A0U1MVC7
contig_1	Pyrodigal	gene	138685	139659	.	+	.	ID=GCA000160335_00118_gene;locus_tag=GCA000160335_00118;gene=tauA
contig_1	Pyrodigal	CDS	138685	139659	.	+	0	ID=GCA000160335_00118;Name=ABC transporter substrate-binding protein;locus_tag=GCA000160335_00118;product=ABC transporter substrate-binding protein;gene=tauA;Parent=GCA000160335_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0715,COG:P,RefSeq:WP_000826657.1,SO:0001217,UniParc:UPI0001B700CA,UniRef:UniRef100_A0A0Z4ELU4,UniRef:UniRef50_A0A380C0S7,UniRef:UniRef90_Q2G1I5
contig_1	Pyrodigal	gene	139656	140417	.	+	.	ID=GCA000160335_00119_gene;locus_tag=GCA000160335_00119;gene=tauC
contig_1	Pyrodigal	CDS	139656	140417	.	+	0	ID=GCA000160335_00119;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000160335_00119;product=ABC transmembrane type-1 domain-containing protein;gene=tauC;Parent=GCA000160335_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,RefSeq:WP_000197556.1,SO:0001217,UniParc:UPI00003B1343,UniRef:UniRef100_A0A0H2CLD7,UniRef:UniRef50_Q2G1I4,UniRef:UniRef90_Q2G1I4
contig_1	Pyrodigal	gene	140427	141461	.	+	.	ID=GCA000160335_00120_gene;locus_tag=GCA000160335_00120;gene=caiA
contig_1	Pyrodigal	CDS	140427	141461	.	+	0	ID=GCA000160335_00120;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000160335_00120;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000160335_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,SO:0001217,UniParc:UPI0001BE5B48,UniRef:UniRef100_A0A0E1XC01,UniRef:UniRef50_A0A0E1XC01,UniRef:UniRef90_A0A0E1XC01
contig_1	Pyrodigal	gene	141675	142034	.	+	.	ID=GCA000160335_00121_gene;locus_tag=GCA000160335_00121;gene=mpsC
contig_1	Pyrodigal	CDS	141675	142034	.	+	0	ID=GCA000160335_00121;Name=Na+-translocating membrane putative-generating system MpsC domain-containing protein;locus_tag=GCA000160335_00121;product=Na+-translocating membrane putative-generating system MpsC domain-containing protein;gene=mpsC;Parent=GCA000160335_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5609,RefSeq:WP_001092006.1,SO:0001217,UniParc:UPI00003B1345,UniRef:UniRef100_A0A7Z7QW85,UniRef:UniRef50_Q2G1I2,UniRef:UniRef90_Q2G1I2
contig_1	Pyrodigal	gene	142058	143233	.	+	.	ID=GCA000160335_00122_gene;locus_tag=GCA000160335_00122;gene=ldhA
contig_1	Pyrodigal	CDS	142058	143233	.	+	0	ID=GCA000160335_00122;Name=NAD-dependent formate dehydrogenase;locus_tag=GCA000160335_00122;product=NAD-dependent formate dehydrogenase;Dbxref=GO:0008863,GO:0051287;gene=ldhA;Parent=GCA000160335_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,SO:0001217,UniParc:UPI00019CD7AE,UniRef:UniRef100_A0A0Y9ZAT8,UniRef:UniRef50_Q2G1I1,UniRef:UniRef90_Q2G1I1
contig_1	Pyrodigal	gene	143619	144869	.	+	.	ID=GCA000160335_00123_gene;locus_tag=GCA000160335_00123
contig_1	Pyrodigal	CDS	143619	144869	.	+	0	ID=GCA000160335_00123;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_00123;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000160335_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08152,RefSeq:WP_000826855.1,SO:0001217,UniParc:UPI00003B1347,UniRef:UniRef100_A0A7Z7QWX3,UniRef:UniRef50_Q2G1I0,UniRef:UniRef90_Q2G1I0
contig_1	Pyrodigal	gene	145316	152491	.	+	.	ID=GCA000160335_00124_gene;locus_tag=GCA000160335_00124;gene=ausA
contig_1	Pyrodigal	CDS	145316	152491	.	+	0	ID=GCA000160335_00124;Name=aureusimine non-ribosomal peptide synthetase AusA;locus_tag=GCA000160335_00124;product=aureusimine non-ribosomal peptide synthetase AusA;gene=ausA;Parent=GCA000160335_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3320,COG:Q,RefSeq:WP_000605274.1,SO:0001217,UniParc:UPI0001B700CB,UniRef:UniRef100_A0A0Z4EL36,UniRef:UniRef50_A0A4U9TAP6,UniRef:UniRef90_A0AAE2ZS18
contig_1	Pyrodigal	gene	152504	153148	.	+	.	ID=GCA000160335_00125_gene;locus_tag=GCA000160335_00125;gene=ausB
contig_1	Pyrodigal	CDS	152504	153148	.	+	0	ID=GCA000160335_00125;Name=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;locus_tag=GCA000160335_00125;product=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;Dbxref=GO:0016780;gene=ausB;Parent=GCA000160335_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_000215724.1,SO:0001217,UniParc:UPI00000546CB,UniRef:UniRef100_Q2G1H8,UniRef:UniRef50_Q2G1H8,UniRef:UniRef90_Q2G1H8;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	153477	153971	.	-	.	ID=GCA000160335_00126_gene;locus_tag=GCA000160335_00126;gene=yagU
contig_1	Pyrodigal	CDS	153477	153971	.	-	0	ID=GCA000160335_00126;Name=DUF1440 domain-containing protein;locus_tag=GCA000160335_00126;product=DUF1440 domain-containing protein;gene=yagU;Parent=GCA000160335_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3477,COG:S,KEGG:K08996,SO:0001217,UniRef:UniRef50_Q2G1H7,UniRef:UniRef90_Q2G1H7
contig_1	Pyrodigal	gene	154241	155011	.	-	.	ID=GCA000160335_00127_gene;locus_tag=GCA000160335_00127;gene=argB
contig_1	Pyrodigal	CDS	154241	155011	.	-	0	ID=GCA000160335_00127;Name=Acetylglutamate kinase;locus_tag=GCA000160335_00127;product=Acetylglutamate kinase;Dbxref=GO:0003991,GO:0005524,GO:0005737,GO:0006526,GO:0042450;gene=argB;Parent=GCA000160335_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0548,COG:E,RefSeq:WP_000668896.1,SO:0001217,UniParc:UPI00003B134B,UniRef:UniRef100_Q6GKC4,UniRef:UniRef50_Q2G1H6,UniRef:UniRef90_Q2G1H6;ec_number=2.7.2.8
contig_1	Pyrodigal	gene	155027	156268	.	-	.	ID=GCA000160335_00128_gene;locus_tag=GCA000160335_00128;gene=argJ
contig_1	Pyrodigal	CDS	155027	156268	.	-	0	ID=GCA000160335_00128;Name=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;locus_tag=GCA000160335_00128;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;Dbxref=GO:0004042,GO:0004358,GO:0005737,GO:0006526,GO:0006592;gene=argJ;Parent=GCA000160335_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1364,COG:E,KEGG:K00620,RefSeq:WP_000682595.1,SO:0001217,UniParc:UPI00003B134C,UniRef:UniRef100_Q6GKC3,UniRef:UniRef50_P63575,UniRef:UniRef90_P63575;ec_number=2.3.1.35
contig_1	Pyrodigal	gene	156280	157314	.	-	.	ID=GCA000160335_00129_gene;locus_tag=GCA000160335_00129;gene=argC
contig_1	Pyrodigal	CDS	156280	157314	.	-	0	ID=GCA000160335_00129;Name=N-acetyl-gamma-glutamyl-phosphate reductase;locus_tag=GCA000160335_00129;product=N-acetyl-gamma-glutamyl-phosphate reductase;Dbxref=GO:0003942,GO:0005737,GO:0006526,GO:0006592,GO:0051287,GO:0070401;gene=argC;Parent=GCA000160335_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0002,COG:E,SO:0001217,UniParc:UPI00019F4E5C,UniRef:UniRef100_A0A7Z7W0G4,UniRef:UniRef50_Q6GKC2,UniRef:UniRef90_Q6GKC2;ec_number=1.2.1.38
contig_1	Infernal	gene	156872	157063	.	+	.	ID=GCA000160335_00130_gene;locus_tag=GCA000160335_00130;gene=sau-53
contig_1	Infernal	ncRNA	156872	157063	7.7e-35	+	.	ID=GCA000160335_00130;Name=Staphylococcus sRNA sau-53;locus_tag=GCA000160335_00130;product=Staphylococcus sRNA sau-53;Dbxref=RFAM:RF02392;Parent=GCA000160335_00130_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02392
contig_1	Pyrodigal	gene	157350	158534	.	-	.	ID=GCA000160335_00131_gene;locus_tag=GCA000160335_00131;gene=rocD
contig_1	Pyrodigal	CDS	157350	158534	.	-	0	ID=GCA000160335_00131;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000160335_00131;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0006526,GO:0030170,GO:0042802,GO:0055129;gene=rocD;Parent=GCA000160335_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,KEGG:K00819,RefSeq:WP_001084444.1,SO:0001217,UniParc:UPI00003B134E,UniRef:UniRef100_Q6GKC1,UniRef:UniRef50_P60295,UniRef:UniRef90_P60295;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	158787	160142	.	-	.	ID=GCA000160335_00132_gene;locus_tag=GCA000160335_00132;gene=brnQ
contig_1	Pyrodigal	CDS	158787	160142	.	-	0	ID=GCA000160335_00132;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000160335_00132;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000160335_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_000728178.1,SO:0001217,UniParc:UPI00003B134F,UniRef:UniRef100_A0A7Z7QWF8,UniRef:UniRef50_A0A133CF62,UniRef:UniRef90_A0A380EB78
contig_1	Pyrodigal	gene	160420	160977	.	-	.	ID=GCA000160335_00133_gene;locus_tag=GCA000160335_00133;gene=pncA
contig_1	Pyrodigal	CDS	160420	160977	.	-	0	ID=GCA000160335_00133;Name=Isochorismatase-like domain-containing protein;locus_tag=GCA000160335_00133;product=Isochorismatase-like domain-containing protein;gene=pncA;Parent=GCA000160335_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000606761.1,SO:0001217,UniParc:UPI00003B1350,UniRef:UniRef100_A0A7Z7QWW2,UniRef:UniRef50_Q2G1H1,UniRef:UniRef90_Q2G1H1
contig_1	Pyrodigal	gene	161044	162684	.	-	.	ID=GCA000160335_00134_gene;locus_tag=GCA000160335_00134;gene=pDC1
contig_1	Pyrodigal	CDS	161044	162684	.	-	0	ID=GCA000160335_00134;Name=Alpha-keto acid decarboxylase family protein;locus_tag=GCA000160335_00134;product=Alpha-keto acid decarboxylase family protein;gene=pDC1;Parent=GCA000160335_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3961,COG:GHR,KEGG:K27601,RefSeq:WP_000813537.1,SO:0001217,UniParc:UPI000197A868,UniRef:UniRef100_A0A0Y9AAE9,UniRef:UniRef50_A0A239YDI9,UniRef:UniRef90_A0A0Y9AAE9;ec_number=4.1.1.72
contig_1	Pyrodigal	gene	162815	162949	.	+	.	ID=GCA000160335_00135_gene;locus_tag=GCA000160335_00135
contig_1	Pyrodigal	CDS	162815	162949	.	+	0	ID=GCA000160335_00135;Name=hypothetical protein;locus_tag=GCA000160335_00135;product=hypothetical protein;Parent=GCA000160335_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000197A869,UniRef:UniRef100_A0A0E1XA95,UniRef:UniRef50_A0A6K2RPY0,UniRef:UniRef90_A0A380DLP3
contig_1	Pyrodigal	gene	162956	165001	.	-	.	ID=GCA000160335_00136_gene;locus_tag=GCA000160335_00136;gene=ptsG
contig_1	Pyrodigal	CDS	162956	165001	.	-	0	ID=GCA000160335_00136;Name=PTS system glucose-specific EIICBA component;locus_tag=GCA000160335_00136;product=PTS system glucose-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=ptsG;Parent=GCA000160335_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_001227718.1,SO:0001217,UniParc:UPI00003B1352,UniRef:UniRef100_Q6GKB7,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2G1G8;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	165586	166641	.	+	.	ID=GCA000160335_00137_gene;locus_tag=GCA000160335_00137;gene=mupG
contig_1	Pyrodigal	CDS	165586	166641	.	+	0	ID=GCA000160335_00137;Name=6-phospho-N-acetylmuramidase;locus_tag=GCA000160335_00137;product=6-phospho-N-acetylmuramidase;Dbxref=GO:0005737,GO:0009254,GO:0016798;gene=mupG;Parent=GCA000160335_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3589,COG:M,KEGG:K09963,RefSeq:WP_000145567.1,SO:0001217,UniParc:UPI00003B1353,UniRef:UniRef100_A0A7Z7QWJ9,UniRef:UniRef50_A0A0H2XHV5,UniRef:UniRef90_A0A0H2XHV5;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	166641	167537	.	+	.	ID=GCA000160335_00138_gene;locus_tag=GCA000160335_00138;gene=murQ
contig_1	Pyrodigal	CDS	166641	167537	.	+	0	ID=GCA000160335_00138;Name=N-acetylmuramic acid 6-phosphate etherase;locus_tag=GCA000160335_00138;product=N-acetylmuramic acid 6-phosphate etherase;Dbxref=GO:0009254,GO:0016803,GO:0016835,GO:0046348,GO:0097173,GO:0097367;gene=murQ;Parent=GCA000160335_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2103,COG:M,KEGG:K07106,RefSeq:WP_000432017.1,SO:0001217,UniParc:UPI0000696B8D,UniRef:UniRef100_Q2G1G6,UniRef:UniRef50_Q2G1G6,UniRef:UniRef90_Q2G1G6;ec_number=4.2.1.126
contig_1	Pyrodigal	gene	167549	169003	.	+	.	ID=GCA000160335_00139_gene;locus_tag=GCA000160335_00139;gene=murP
contig_1	Pyrodigal	CDS	167549	169003	.	+	0	ID=GCA000160335_00139;Name=PTS system MurNAc-GlcNAc-specific EIIBC component;locus_tag=GCA000160335_00139;product=PTS system MurNAc-GlcNAc-specific EIIBC component;Dbxref=GO:0005886,GO:0008982,GO:0009254,GO:0009401,GO:0016301,GO:0090588;gene=murP;Parent=GCA000160335_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000159755.1,SO:0001217,UniParc:UPI00003B1354,UniRef:UniRef100_Q6GKB4,UniRef:UniRef50_Q4L8H5,UniRef:UniRef90_Q2G1G5
contig_1	Pyrodigal	gene	169003	169881	.	+	.	ID=GCA000160335_00140_gene;locus_tag=GCA000160335_00140;gene=rpiR
contig_1	Pyrodigal	CDS	169003	169881	.	+	0	ID=GCA000160335_00140;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000160335_00140;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000160335_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,SO:0001217,UniParc:UPI00000546BD,UniRef:UniRef100_Q2G1G4,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2G1G4
contig_1	Pyrodigal	gene	170076	170357	.	-	.	ID=GCA000160335_00141_gene;locus_tag=GCA000160335_00141
contig_1	Pyrodigal	CDS	170076	170357	.	-	0	ID=GCA000160335_00141;Name=hypothetical protein;locus_tag=GCA000160335_00141;product=hypothetical protein;Parent=GCA000160335_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573602.1,SO:0001217,UniParc:UPI00003B1355,UniRef:UniRef100_A0A7Z7QWW4,UniRef:UniRef50_Q2G1G3,UniRef:UniRef90_Q2G1G3
contig_1	Pyrodigal	gene	170570	173359	.	+	.	ID=GCA000160335_00142_gene;locus_tag=GCA000160335_00142
contig_1	Pyrodigal	CDS	170570	173359	.	+	0	ID=GCA000160335_00142;Name=type I restriction endonuclease subunit R;locus_tag=GCA000160335_00142;product=type I restriction endonuclease subunit R;Parent=GCA000160335_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01153,RefSeq:WP_000331339.1,SO:0001217,UniParc:UPI0001B701B1,UniRef:UniRef100_UPI0001B701B1,UniRef:UniRef50_Q4A127,UniRef:UniRef90_UPI0001B701B1;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	173559	174422	.	+	.	ID=GCA000160335_00143_gene;locus_tag=GCA000160335_00143
contig_1	Pyrodigal	CDS	173559	174422	.	+	0	ID=GCA000160335_00143;Name=Sce7726 family protein;locus_tag=GCA000160335_00143;product=Sce7726 family protein;Parent=GCA000160335_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000370339.1,SO:0001217,UniParc:UPI00003B1357,UniRef:UniRef100_A0A131J5K0,UniRef:UniRef50_Q2G1G1,UniRef:UniRef90_A0A5S9C325
contig_1	Pyrodigal	gene	174627	176219	.	-	.	ID=GCA000160335_00144_gene;locus_tag=GCA000160335_00144;gene=cntF
contig_1	Pyrodigal	CDS	174627	176219	.	-	0	ID=GCA000160335_00144;Name=staphylopine uptake ABC transporter ATP-binding protein CntF;locus_tag=GCA000160335_00144;product=staphylopine uptake ABC transporter ATP-binding protein CntF;gene=cntF;Parent=GCA000160335_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4172,COG:Q,RefSeq:WP_000067359.1,SO:0001217,UniParc:UPI0001B700CF,UniRef:UniRef100_UPI0001B700CF,UniRef:UniRef50_A0A0Y9RYS1,UniRef:UniRef90_A0A0Y9RYS1
contig_1	Pyrodigal	gene	176221	177654	.	+	.	ID=GCA000160335_00145_gene;locus_tag=GCA000160335_00145;gene=dppB
contig_1	Pyrodigal	CDS	176221	177654	.	+	0	ID=GCA000160335_00145;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000160335_00145;product=ABC transmembrane type-1 domain-containing protein;gene=dppB;Parent=GCA000160335_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,SO:0001217,UniParc:UPI0002C8E9AA,UniRef:UniRef100_A0A2I7Y3D3,UniRef:UniRef50_Q2G1F7,UniRef:UniRef90_Q2G1F7
contig_1	Pyrodigal	gene	177660	178823	.	+	.	ID=GCA000160335_00146_gene;locus_tag=GCA000160335_00146;gene=dppC
contig_1	Pyrodigal	CDS	177660	178823	.	+	0	ID=GCA000160335_00146;Name=ABC transporter permease;locus_tag=GCA000160335_00146;product=ABC transporter permease;gene=dppC;Parent=GCA000160335_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000240107.1,SO:0001217,UniParc:UPI00003B135A,UniRef:UniRef100_A0A7Z7QWX4,UniRef:UniRef50_A0A0D0SFB5,UniRef:UniRef90_A0A390VWI1
contig_1	Pyrodigal	gene	178840	180615	.	+	.	ID=GCA000160335_00147_gene;locus_tag=GCA000160335_00147;gene=oppA
contig_1	Pyrodigal	CDS	178840	180615	.	+	0	ID=GCA000160335_00147;Name=Solute-binding protein family 5 domain-containing protein;locus_tag=GCA000160335_00147;product=Solute-binding protein family 5 domain-containing protein;gene=oppA;Parent=GCA000160335_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_000720821.1,SO:0001217,UniParc:UPI00000B3D5F,UniRef:UniRef100_A0A7Z7QWB4,UniRef:UniRef50_Q2G1F5,UniRef:UniRef90_Q2G1F5
contig_1	Pyrodigal	gene	180653	182659	.	+	.	ID=GCA000160335_00148_gene;locus_tag=GCA000160335_00148;gene=ggt
contig_1	Pyrodigal	CDS	180653	182659	.	+	0	ID=GCA000160335_00148;Name=gamma-glutamyltransferase;locus_tag=GCA000160335_00148;product=gamma-glutamyltransferase;Dbxref=GO:0006750,GO:0006751,GO:0036374;gene=ggt;Parent=GCA000160335_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0405,COG:E,RefSeq:WP_000236415.1,SO:0001217,UniParc:UPI000197AAE0,UniRef:UniRef100_A0A113XVP3,UniRef:UniRef50_A0A151A3J0,UniRef:UniRef90_A0A0U1MVT3;ec_number=2.3.2.2
contig_1	Pyrodigal	gene	183196	183822	.	-	.	ID=GCA000160335_00149_gene;locus_tag=GCA000160335_00149;gene=azoR
contig_1	Pyrodigal	CDS	183196	183822	.	-	0	ID=GCA000160335_00149;Name=FMN-dependent NADH:quinone oxidoreductase;locus_tag=GCA000160335_00149;product=FMN-dependent NADH:quinone oxidoreductase;Dbxref=GO:0009055,GO:0010181,GO:0016652,GO:0016655;gene=azoR;Parent=GCA000160335_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_001151462.1,SO:0001217,UniParc:UPI00003B135C,UniRef:UniRef100_Q6GKA4,UniRef:UniRef50_O32224,UniRef:UniRef90_Q2YV20;ec_number=1.6.5.-
contig_1	Pyrodigal	gene	184031	184609	.	+	.	ID=GCA000160335_00150_gene;locus_tag=GCA000160335_00150;gene=spoIIQ2
contig_1	Pyrodigal	CDS	184031	184609	.	+	0	ID=GCA000160335_00150;Name=lysostaphin;locus_tag=GCA000160335_00150;product=lysostaphin;gene=spoIIQ2;Parent=GCA000160335_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5821,COG:D,KEGG:K21472,RefSeq:WP_000166911.1,SO:0001217,UniParc:UPI00003B135D,UniRef:UniRef100_A0A0E1XA55,UniRef:UniRef50_A0AAP8TTY0,UniRef:UniRef90_A0A077UET8;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	184992	186089	.	+	.	ID=GCA000160335_00151_gene;locus_tag=GCA000160335_00151;gene=malK
contig_1	Pyrodigal	CDS	184992	186089	.	+	0	ID=GCA000160335_00151;Name=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000160335_00151;product=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=malK;Parent=GCA000160335_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3839,COG:G,RefSeq:WP_000818914.1,SO:0001217,UniParc:UPI00000546AE,UniRef:UniRef100_Q2G1F0,UniRef:UniRef50_A0A3A3AX25,UniRef:UniRef90_A0A3A3AX25
contig_1	Pyrodigal	gene	186102	187373	.	+	.	ID=GCA000160335_00152_gene;locus_tag=GCA000160335_00152;gene=malE
contig_1	Pyrodigal	CDS	186102	187373	.	+	0	ID=GCA000160335_00152;Name=Maltodextrin-binding protein;locus_tag=GCA000160335_00152;product=Maltodextrin-binding protein;gene=malE;Parent=GCA000160335_00152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2182,COG:G,RefSeq:WP_000034978.1,SO:0001217,UniParc:UPI00003B135E,UniRef:UniRef100_A0A7Z7QWD7,UniRef:UniRef50_A0A380G462,UniRef:UniRef90_Q2G1E9
contig_1	Pyrodigal	gene	187376	188644	.	+	.	ID=GCA000160335_00153_gene;locus_tag=GCA000160335_00153;gene=ugpA
contig_1	Pyrodigal	CDS	187376	188644	.	+	0	ID=GCA000160335_00153;Name=Maltose/maltodextrin transport system permease protein;locus_tag=GCA000160335_00153;product=Maltose/maltodextrin transport system permease protein;gene=ugpA;Parent=GCA000160335_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1175,COG:G,RefSeq:WP_000166895.1,SO:0001217,UniParc:UPI00003B135F,UniRef:UniRef100_A0A7Z7QX55,UniRef:UniRef50_A0A0C2H8L9,UniRef:UniRef90_A0A0C2H8L9
contig_1	Pyrodigal	gene	188646	189485	.	+	.	ID=GCA000160335_00154_gene;locus_tag=GCA000160335_00154;gene=malG
contig_1	Pyrodigal	CDS	188646	189485	.	+	0	ID=GCA000160335_00154;Name=Maltose ABC transporter%2C permease protein;locus_tag=GCA000160335_00154;product=Maltose ABC transporter%2C permease protein;gene=malG;Parent=GCA000160335_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3833,COG:G,RefSeq:WP_000162661.1,SO:0001217,UniParc:UPI0000052279,UniRef:UniRef100_Q2G1E7,UniRef:UniRef50_H3NDB5,UniRef:UniRef90_Q2G1E7
contig_1	Pyrodigal	gene	189662	190738	.	+	.	ID=GCA000160335_00155_gene;locus_tag=GCA000160335_00155;gene=mviM
contig_1	Pyrodigal	CDS	189662	190738	.	+	0	ID=GCA000160335_00155;Name=NADH-dependent dehydrogenase;locus_tag=GCA000160335_00155;product=NADH-dependent dehydrogenase;gene=mviM;Parent=GCA000160335_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000153458.1,SO:0001217,UniParc:UPI0001EFF153,UniRef:UniRef100_A0A0E1XA50,UniRef:UniRef50_A0A660A233,UniRef:UniRef90_A0A660A233
contig_1	Pyrodigal	gene	190763	191803	.	+	.	ID=GCA000160335_00156_gene;locus_tag=GCA000160335_00156;gene=mviM
contig_1	Pyrodigal	CDS	190763	191803	.	+	0	ID=GCA000160335_00156;Name=Gfo/Idh/MocA family oxidoreductase;locus_tag=GCA000160335_00156;product=Gfo/Idh/MocA family oxidoreductase;gene=mviM;Parent=GCA000160335_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000163803.1,SO:0001217,UniParc:UPI00003B1361,UniRef:UniRef100_A0A7Z7W0M2,UniRef:UniRef50_A0A2Y2IEY6,UniRef:UniRef90_A0A2Y2IEY6
contig_1	Pyrodigal	gene	191858	192826	.	+	.	ID=GCA000160335_00157_gene;locus_tag=GCA000160335_00157;gene=ycjR
contig_1	Pyrodigal	CDS	191858	192826	.	+	0	ID=GCA000160335_00157;Name=Xylose isomerase-like TIM barrel domain-containing protein;locus_tag=GCA000160335_00157;product=Xylose isomerase-like TIM barrel domain-containing protein;gene=ycjR;Parent=GCA000160335_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,RefSeq:WP_000690412.1,SO:0001217,UniParc:UPI0001B70102,UniRef:UniRef100_UPI0001B70102,UniRef:UniRef50_K8EEE9,UniRef:UniRef90_Q2G1E4
contig_1	Pyrodigal	gene	193185	193679	.	-	.	ID=GCA000160335_00158_gene;locus_tag=GCA000160335_00158;gene=ypbQ
contig_1	Pyrodigal	CDS	193185	193679	.	-	0	ID=GCA000160335_00158;Name=Isoprenylcysteine carboxyl methyltransferase family protein;locus_tag=GCA000160335_00158;product=Isoprenylcysteine carboxyl methyltransferase family protein;gene=ypbQ;Parent=GCA000160335_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1755,COG:S,RefSeq:WP_000603755.1,SO:0001217,UniParc:UPI00000D7830,UniRef:UniRef100_Q2G1E3,UniRef:UniRef50_Q2G1E3,UniRef:UniRef90_Q2G1E3
contig_1	Pyrodigal	gene	193912	195291	.	+	.	ID=GCA000160335_00159_gene;locus_tag=GCA000160335_00159;gene=uhpT
contig_1	Pyrodigal	CDS	193912	195291	.	+	0	ID=GCA000160335_00159;Name=hexose phosphate transporter UhpT;locus_tag=GCA000160335_00159;product=hexose phosphate transporter UhpT;Dbxref=GO:0022857,GO:0055085;gene=uhpT;Parent=GCA000160335_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K07784,RefSeq:WP_001008722.1,SO:0001217,UniParc:UPI00000D772F,UniRef:UniRef100_Q2G1E2,UniRef:UniRef50_A0A9D7FSA6,UniRef:UniRef90_Q2G1E2
contig_1	Pyrodigal	gene	195650	196408	.	-	.	ID=GCA000160335_00160_gene;locus_tag=GCA000160335_00160;gene=hptR
contig_1	Pyrodigal	CDS	195650	196408	.	-	0	ID=GCA000160335_00160;Name=Transcriptional regulatory protein HptR;locus_tag=GCA000160335_00160;product=Transcriptional regulatory protein HptR;Dbxref=GO:0000160,GO:0003700,GO:0005737,GO:0043565;gene=hptR;Parent=GCA000160335_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4753,COG:TK,KEGG:K07720,RefSeq:WP_000477517.1,SO:0001217,UniParc:UPI00003B1363,UniRef:UniRef100_Q6GK93,UniRef:UniRef50_Q2G1E1,UniRef:UniRef90_Q2G1E1
contig_1	Pyrodigal	gene	196401	197957	.	-	.	ID=GCA000160335_00161_gene;locus_tag=GCA000160335_00161;gene=hptS
contig_1	Pyrodigal	CDS	196401	197957	.	-	0	ID=GCA000160335_00161;Name=Sensor protein kinase HptS;locus_tag=GCA000160335_00161;product=Sensor protein kinase HptS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hptS;Parent=GCA000160335_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2972,COG:T,KEGG:K25212,RefSeq:WP_000127979.1,SO:0001217,UniParc:UPI00003B1364,UniRef:UniRef100_Q6GK92,UniRef:UniRef50_Q2G1E0,UniRef:UniRef90_Q2G1E0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	197954	198922	.	-	.	ID=GCA000160335_00162_gene;locus_tag=GCA000160335_00162;gene=afuA
contig_1	Pyrodigal	CDS	197954	198922	.	-	0	ID=GCA000160335_00162;Name=Lipoprotein%2C putative;locus_tag=GCA000160335_00162;product=Lipoprotein%2C putative;gene=afuA;Parent=GCA000160335_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K25211,RefSeq:WP_000837113.1,SO:0001217,UniParc:UPI0001B70103,UniRef:UniRef100_UPI0001B70103,UniRef:UniRef50_S2XG35,UniRef:UniRef90_Q2G1D9
contig_1	Pyrodigal	gene	199510	201759	.	+	.	ID=GCA000160335_00163_gene;locus_tag=GCA000160335_00163;gene=pflB
contig_1	Pyrodigal	CDS	199510	201759	.	+	0	ID=GCA000160335_00163;Name=formate C-acetyltransferase;locus_tag=GCA000160335_00163;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006006,GO:0008861;gene=pflB;Parent=GCA000160335_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_000894660.1,SO:0001217,UniParc:UPI00000D789B,UniRef:UniRef100_Q2G1D8,UniRef:UniRef50_Q2G1D8,UniRef:UniRef90_Q2G1D8;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	201782	202537	.	+	.	ID=GCA000160335_00164_gene;locus_tag=GCA000160335_00164;gene=pflA
contig_1	Pyrodigal	CDS	201782	202537	.	+	0	ID=GCA000160335_00164;Name=pyruvate formate-lyase-activating protein;locus_tag=GCA000160335_00164;product=pyruvate formate-lyase-activating protein;Dbxref=GO:0005737,GO:0006006,GO:0043365,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000160335_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_000911657.1,SO:0001217,UniParc:UPI00000546A2,UniRef:UniRef100_Q2G1D7,UniRef:UniRef50_P0A442,UniRef:UniRef90_Q2G1D7;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	203172	204017	.	-	.	ID=GCA000160335_00165_gene;locus_tag=GCA000160335_00165;gene=blaPC1
contig_1	Pyrodigal	CDS	203172	204017	.	-	0	ID=GCA000160335_00165;Name=BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1;locus_tag=GCA000160335_00165;product=BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1;Dbxref=GO:0008800,GO:0030655,GO:0046677;gene=blaPC1;Parent=GCA000160335_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2367,COG:V,NCBIProtein:WP_000733283.1,RefSeq:WP_000733283.1,SO:0001217,UniParc:UPI000000045C,UniRef:UniRef100_P00807,UniRef:UniRef50_P00807,UniRef:UniRef90_P00807;ec_number=3.5.2.6
contig_1	Pyrodigal	gene	204124	205881	.	+	.	ID=GCA000160335_00166_gene;locus_tag=GCA000160335_00166;gene=blaR1
contig_1	Pyrodigal	CDS	204124	205881	.	+	0	ID=GCA000160335_00166;Name=beta-lactam sensor/signal transducer BlaR1;locus_tag=GCA000160335_00166;product=beta-lactam sensor/signal transducer BlaR1;Dbxref=GO:0005886,GO:0008658;gene=blaR1;Parent=GCA000160335_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4219,COG:T,NCBIProtein:WP_001096376.1,RefSeq:WP_001096374.1,SO:0001217,UniParc:UPI00000B10DD,UniRef:UniRef100_A0AAW7MD96,UniRef:UniRef50_P18357,UniRef:UniRef90_P18357
contig_1	Pyrodigal	gene	205871	206251	.	+	.	ID=GCA000160335_00167_gene;locus_tag=GCA000160335_00167;gene=blaI
contig_1	Pyrodigal	CDS	205871	206251	.	+	0	ID=GCA000160335_00167;Name=penicillinase repressor BlaI;locus_tag=GCA000160335_00167;product=penicillinase repressor BlaI;Dbxref=GO:0003677,GO:0005737,GO:0045892,GO:0046677;gene=blaI;Parent=GCA000160335_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3682,COG:K,KEGG:K02171,NCBIProtein:WP_001284656.1,RefSeq:WP_001284656.1,SO:0001217,UniParc:UPI00001269E0,UniRef:UniRef100_P0A042,UniRef:UniRef50_P0A042,UniRef:UniRef90_P0A042
contig_1	Pyrodigal	gene	206515	207108	.	+	.	ID=GCA000160335_00168_gene;locus_tag=GCA000160335_00168;gene=resR
contig_1	Pyrodigal	CDS	206515	207108	.	+	0	ID=GCA000160335_00168;Name=Transposon Tn552 DNA-invertase BinR;locus_tag=GCA000160335_00168;product=Transposon Tn552 DNA-invertase BinR;Dbxref=GO:0000150,GO:0003677,GO:0015074;gene=resR;Parent=GCA000160335_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K14060,RefSeq:WP_000690628.1,SO:0001217,UniParc:UPI00000BD8F4,UniRef:UniRef100_Q8KVS8,UniRef:UniRef50_P19241,UniRef:UniRef90_P19241
contig_1	Pyrodigal	gene	207080	208522	.	+	.	ID=GCA000160335_00169_gene;locus_tag=GCA000160335_00169;gene=insO
contig_1	Pyrodigal	CDS	207080	208522	.	+	0	ID=GCA000160335_00169;Name=Transposase for transposon Tn552;locus_tag=GCA000160335_00169;product=Transposase for transposon Tn552;Dbxref=GO:0003677,GO:0006310,GO:0015074,GO:0032196;gene=insO;Parent=GCA000160335_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2801,COG:X,RefSeq:WP_000790705.1,SO:0001217,UniParc:UPI0000001378,UniRef:UniRef100_P18416,UniRef:UniRef50_P18416,UniRef:UniRef90_P18416
contig_1	Pyrodigal	gene	208515	209330	.	+	.	ID=GCA000160335_00170_gene;locus_tag=GCA000160335_00170
contig_1	Pyrodigal	CDS	208515	209330	.	+	0	ID=GCA000160335_00170;Name=putative ATP-binding protein;locus_tag=GCA000160335_00170;product=putative ATP-binding protein;Dbxref=GO:0005524,GO:0016887;Parent=GCA000160335_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2842,COG:X,RefSeq:WP_000164963.1,SO:0001217,UniParc:UPI00000BD5A7,UniRef:UniRef100_Q8KVS7,UniRef:UniRef50_P18179,UniRef:UniRef90_P18179
contig_1	Pyrodigal	gene	209508	211175	.	+	.	ID=GCA000160335_00171_gene;locus_tag=GCA000160335_00171;gene=ugpQ1
contig_1	Pyrodigal	CDS	209508	211175	.	+	0	ID=GCA000160335_00171;Name=GP-PDE domain-containing protein;locus_tag=GCA000160335_00171;product=GP-PDE domain-containing protein;gene=ugpQ1;Parent=GCA000160335_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4781,COG:I,KEGG:K01126,SO:0001217,UniRef:UniRef50_Q2G1D5,UniRef:UniRef90_Q2G1D5;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	211339	211683	.	-	.	ID=GCA000160335_00172_gene;locus_tag=GCA000160335_00172
contig_1	Pyrodigal	CDS	211339	211683	.	-	0	ID=GCA000160335_00172;Name=Staphylococcal complement inhibitor;locus_tag=GCA000160335_00172;product=Staphylococcal complement inhibitor;Parent=GCA000160335_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14199,RefSeq:WP_000211594.1,SO:0001217,UniParc:UPI00003B1368,UniRef:UniRef100_A0A7Z7QWE8,UniRef:UniRef50_Q4W8K4,UniRef:UniRef90_Q4W8K4
contig_1	Pyrodigal	gene	211873	213864	.	+	.	ID=GCA000160335_00173_gene;locus_tag=GCA000160335_00173;gene=coa
contig_1	Pyrodigal	CDS	211873	213864	.	+	0	ID=GCA000160335_00173;Name=staphylocoagulase;locus_tag=GCA000160335_00173;product=staphylocoagulase;gene=coa;Parent=GCA000160335_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000744115.1,SO:0001217,UniParc:UPI000051950B,UniRef:UniRef100_A0A7Z7QX67,UniRef:UniRef50_P17855,UniRef:UniRef90_A0A7U4PE62
contig_1	Pyrodigal	gene	214451	215635	.	-	.	ID=GCA000160335_00174_gene;locus_tag=GCA000160335_00174;gene=paaJ
contig_1	Pyrodigal	CDS	214451	215635	.	-	0	ID=GCA000160335_00174;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000160335_00174;product=putative acetyl-CoA acyltransferase;gene=paaJ;Parent=GCA000160335_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001154633.1,SO:0001217,UniParc:UPI00003B136A,UniRef:UniRef100_A0A0E1XCC9,UniRef:UniRef50_O32177,UniRef:UniRef90_Q2G1D0
contig_1	Pyrodigal	gene	215665	217926	.	-	.	ID=GCA000160335_00175_gene;locus_tag=GCA000160335_00175;gene=fadB
contig_1	Pyrodigal	CDS	215665	217926	.	-	0	ID=GCA000160335_00175;Name=enoyl-CoA hydratase;locus_tag=GCA000160335_00175;product=enoyl-CoA hydratase;gene=fadB;Parent=GCA000160335_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1250,COG:I,RefSeq:WP_000154506.1,SO:0001217,UniParc:UPI00003B136B,UniRef:UniRef100_A0A7Z7W0J0,UniRef:UniRef50_Q2G1C9,UniRef:UniRef90_Q2G1C9
contig_1	Pyrodigal	gene	218113	219324	.	-	.	ID=GCA000160335_00176_gene;locus_tag=GCA000160335_00176;gene=caiA
contig_1	Pyrodigal	CDS	218113	219324	.	-	0	ID=GCA000160335_00176;Name=Glutaryl-CoA dehydrogenase;locus_tag=GCA000160335_00176;product=Glutaryl-CoA dehydrogenase;gene=caiA;Parent=GCA000160335_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000142185.1,SO:0001217,UniParc:UPI0002EE930A,UniRef:UniRef100_UPI0002EE930A,UniRef:UniRef50_A0A2S6D7L1,UniRef:UniRef90_A0A2S6D7L1
contig_1	Pyrodigal	gene	219436	220941	.	-	.	ID=GCA000160335_00177_gene;locus_tag=GCA000160335_00177;gene=menE
contig_1	Pyrodigal	CDS	219436	220941	.	-	0	ID=GCA000160335_00177;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000160335_00177;product=Putative long chain fatty acid-CoA ligase VraA;gene=menE;Parent=GCA000160335_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001008395.1,SO:0001217,UniParc:UPI00000D9BF5,UniRef:UniRef100_A0A2X2K333,UniRef:UniRef50_A0AAP7IER6,UniRef:UniRef90_A0A390WIJ0
contig_1	Pyrodigal	gene	220967	222529	.	-	.	ID=GCA000160335_00178_gene;locus_tag=GCA000160335_00178;gene=ydiF
contig_1	Pyrodigal	CDS	220967	222529	.	-	0	ID=GCA000160335_00178;Name=Acetyl-CoA/acetoacetyl-CoA transferase;locus_tag=GCA000160335_00178;product=Acetyl-CoA/acetoacetyl-CoA transferase;gene=ydiF;Parent=GCA000160335_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4670,COG:I,SO:0001217,UniParc:UPI00003B136D,UniRef:UniRef100_A0A7Z7W1N8,UniRef:UniRef50_A0A9N8IHE7,UniRef:UniRef90_A0A9N8IHE7
contig_1	Pyrodigal	gene	222903	223574	.	+	.	ID=GCA000160335_00179_gene;locus_tag=GCA000160335_00179
contig_1	Pyrodigal	CDS	222903	223574	.	+	0	ID=GCA000160335_00179;Name=Glutamine amidotransferase class-I family protein;locus_tag=GCA000160335_00179;product=Glutamine amidotransferase class-I family protein;Parent=GCA000160335_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001265703.1,SO:0001217,UniParc:UPI00003B136E,UniRef:UniRef100_A0A7Z7QWI9,UniRef:UniRef50_C8P554,UniRef:UniRef90_A0A0U1MVU9
contig_1	Pyrodigal	gene	223711	224940	.	+	.	ID=GCA000160335_00180_gene;locus_tag=GCA000160335_00180;gene=prsW
contig_1	Pyrodigal	CDS	223711	224940	.	+	0	ID=GCA000160335_00180;Name=Protease PrsW;locus_tag=GCA000160335_00180;product=Protease PrsW;gene=prsW;Parent=GCA000160335_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2339,COG:T,SO:0001217,UniRef:UniRef50_S2YE33,UniRef:UniRef90_A0A5S9C588
contig_1	Pyrodigal	gene	225251	226726	.	-	.	ID=GCA000160335_00181_gene;locus_tag=GCA000160335_00181;gene=nikA
contig_1	Pyrodigal	CDS	225251	226726	.	-	0	ID=GCA000160335_00181;Name=nickel ABC transporter substrate-binding protein;locus_tag=GCA000160335_00181;product=nickel ABC transporter substrate-binding protein;Dbxref=GO:0015675,GO:0015833,GO:0042597,GO:0043190,GO:0140359,GO:1904680;gene=nikA;Parent=GCA000160335_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000669667.1,SO:0001217,UniParc:UPI000197A86D,UniRef:UniRef100_A0A658WE18,UniRef:UniRef50_Q2G2P5,UniRef:UniRef90_Q2G2P5
contig_1	Pyrodigal	gene	226924	227280	.	-	.	ID=GCA000160335_00182_gene;locus_tag=GCA000160335_00182
contig_1	Pyrodigal	CDS	226924	227280	.	-	0	ID=GCA000160335_00182;Name=DUF488 domain-containing protein;locus_tag=GCA000160335_00182;product=DUF488 domain-containing protein;Parent=GCA000160335_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000215220.1,SO:0001217,UniParc:UPI00003B1371,UniRef:UniRef100_A0A7Z7QWK1,UniRef:UniRef50_Q4A0G8,UniRef:UniRef90_A0A0U1MWQ1
contig_1	Pyrodigal	gene	227437	227610	.	-	.	ID=GCA000160335_00183_gene;locus_tag=GCA000160335_00183
contig_1	Pyrodigal	CDS	227437	227610	.	-	0	ID=GCA000160335_00183;Name=Membrane protein;locus_tag=GCA000160335_00183;product=Membrane protein;Parent=GCA000160335_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000773985.1,SO:0001217,UniParc:UPI00003B1372,UniRef:UniRef100_A0A7Z7QWC4,UniRef:UniRef50_Q2G2P3,UniRef:UniRef90_Q2G2P3
contig_1	Pyrodigal	gene	227635	228780	.	-	.	ID=GCA000160335_00184_gene;locus_tag=GCA000160335_00184;gene=fpr
contig_1	Pyrodigal	CDS	227635	228780	.	-	0	ID=GCA000160335_00184;Name=nitric oxide dioxygenase;locus_tag=GCA000160335_00184;product=nitric oxide dioxygenase;gene=fpr;Parent=GCA000160335_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,KEGG:K05916,RefSeq:WP_000954802.1,SO:0001217,UniParc:UPI00003B1373,UniRef:UniRef100_A0A7Z7QWM9,UniRef:UniRef50_Q2G2P2,UniRef:UniRef90_Q2G2P2;ec_number=1.14.12.17
contig_1	Pyrodigal	gene	229353	230306	.	+	.	ID=GCA000160335_00185_gene;locus_tag=GCA000160335_00185;gene=ldh1
contig_1	Pyrodigal	CDS	229353	230306	.	+	0	ID=GCA000160335_00185;Name=L-lactate dehydrogenase;locus_tag=GCA000160335_00185;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh1;Parent=GCA000160335_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_001031885.1,SO:0001217,UniParc:UPI0001B70130,UniRef:UniRef100_UPI0001B70130,UniRef:UniRef50_Q2G218,UniRef:UniRef90_Q2G218;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	230627	232156	.	-	.	ID=GCA000160335_00186_gene;locus_tag=GCA000160335_00186;gene=ptsG2
contig_1	Pyrodigal	CDS	230627	232156	.	-	0	ID=GCA000160335_00186;Name=PTS glucose transporter subunit IIB;locus_tag=GCA000160335_00186;product=PTS glucose transporter subunit IIB;gene=ptsG2;Parent=GCA000160335_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000838204.1,SO:0001217,UniParc:UPI00000D9BFA,UniRef:UniRef100_Q2G219,UniRef:UniRef50_A0A0G9G6Y5,UniRef:UniRef90_A0A2S6D7K1
contig_1	Pyrodigal	gene	232520	233455	.	+	.	ID=GCA000160335_00187_gene;locus_tag=GCA000160335_00187;gene=uRH1
contig_1	Pyrodigal	CDS	232520	233455	.	+	0	ID=GCA000160335_00187;Name=Nucleoside hydrolase;locus_tag=GCA000160335_00187;product=Nucleoside hydrolase;gene=uRH1;Parent=GCA000160335_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000823233.1,SO:0001217,UniParc:UPI000197A86E,UniRef:UniRef100_A0A7Z7QX78,UniRef:UniRef50_A0A389XQD2,UniRef:UniRef90_A0A389XQD2
contig_1	Pyrodigal	gene	233793	235889	.	+	.	ID=GCA000160335_00188_gene;locus_tag=GCA000160335_00188;gene=bglG
contig_1	Pyrodigal	CDS	233793	235889	.	+	0	ID=GCA000160335_00188;Name=PTS system mannitol (Cryptic)-specific transporter subunit IIA;locus_tag=GCA000160335_00188;product=PTS system mannitol (Cryptic)-specific transporter subunit IIA;gene=bglG;Parent=GCA000160335_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_001012724.1,SO:0001217,UniParc:UPI000197A86F,UniRef:UniRef100_A0A0Z0QCU8,UniRef:UniRef50_A0A0Z0QCU8,UniRef:UniRef90_A0A0Z0QCU8
contig_1	Pyrodigal	gene	235874	236341	.	+	.	ID=GCA000160335_00189_gene;locus_tag=GCA000160335_00189;gene=ptsN
contig_1	Pyrodigal	CDS	235874	236341	.	+	0	ID=GCA000160335_00189;Name=PTS sugar transporter subunit IIA;locus_tag=GCA000160335_00189;product=PTS sugar transporter subunit IIA;gene=ptsN;Parent=GCA000160335_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000531477.1,SO:0001217,UniParc:UPI00003B1377,UniRef:UniRef100_A0A7Z7W0N4,UniRef:UniRef50_A0A380G592,UniRef:UniRef90_A0A2S6DBD2
contig_1	Pyrodigal	gene	236364	236642	.	+	.	ID=GCA000160335_00190_gene;locus_tag=GCA000160335_00190;gene=sgaB
contig_1	Pyrodigal	CDS	236364	236642	.	+	0	ID=GCA000160335_00190;Name=PTS system galactitol-specific transporter subunit IIB;locus_tag=GCA000160335_00190;product=PTS system galactitol-specific transporter subunit IIB;gene=sgaB;Parent=GCA000160335_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000815795.1,SO:0001217,UniParc:UPI00000D765E,UniRef:UniRef100_Q2G2B6,UniRef:UniRef50_Q9KGB5,UniRef:UniRef90_A0A239YB06
contig_1	Pyrodigal	gene	236869	238128	.	+	.	ID=GCA000160335_00191_gene;locus_tag=GCA000160335_00191;gene=sgcC
contig_1	Pyrodigal	CDS	236869	238128	.	+	0	ID=GCA000160335_00191;Name=PTS galactitol transporter subunit IIC;locus_tag=GCA000160335_00191;product=PTS galactitol transporter subunit IIC;gene=sgcC;Parent=GCA000160335_00191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3775,COG:G,KEGG:K02775,RefSeq:WP_000120115.1,SO:0001217,UniParc:UPI00003B1378,UniRef:UniRef100_A0A7Z7W0I4,UniRef:UniRef50_A0A2Y1NYM9,UniRef:UniRef90_A0A2Y1NYM9
contig_1	Pyrodigal	gene	238146	239201	.	+	.	ID=GCA000160335_00192_gene;locus_tag=GCA000160335_00192;gene=tdh
contig_1	Pyrodigal	CDS	238146	239201	.	+	0	ID=GCA000160335_00192;Name=Sorbitol dehydrogenase;locus_tag=GCA000160335_00192;product=Sorbitol dehydrogenase;gene=tdh;Parent=GCA000160335_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000646197.1,SO:0001217,UniParc:UPI0001B70131,UniRef:UniRef100_A0A7L5PXE2,UniRef:UniRef50_Q9Z9U1,UniRef:UniRef90_A0A2I7Y3H3
contig_1	Pyrodigal	gene	239203	239349	.	+	.	ID=GCA000160335_00193_gene;locus_tag=GCA000160335_00193
contig_1	Pyrodigal	CDS	239203	239349	.	+	0	ID=GCA000160335_00193;Name=hypothetical protein;locus_tag=GCA000160335_00193;product=hypothetical protein;Parent=GCA000160335_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230358.1,SO:0001217,UniParc:UPI0000054688,UniRef:UniRef100_Q2G2C6,UniRef:UniRef50_Q2G2C6,UniRef:UniRef90_Q2G2C6
contig_1	Pyrodigal	gene	239373	240416	.	+	.	ID=GCA000160335_00194_gene;locus_tag=GCA000160335_00194;gene=tdh
contig_1	Pyrodigal	CDS	239373	240416	.	+	0	ID=GCA000160335_00194;Name=Enoyl reductase (ER) domain-containing protein;locus_tag=GCA000160335_00194;product=Enoyl reductase (ER) domain-containing protein;gene=tdh;Parent=GCA000160335_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000645611.1,SO:0001217,UniParc:UPI00003B137A,UniRef:UniRef100_A0A7Z7QX04,UniRef:UniRef50_A0A9X8RLC9,UniRef:UniRef90_Q2G2C5
contig_1	Pyrodigal	gene	240944	241660	.	+	.	ID=GCA000160335_00195_gene;locus_tag=GCA000160335_00195;gene=tarI2
contig_1	Pyrodigal	CDS	240944	241660	.	+	0	ID=GCA000160335_00195;Name=Ribitol-5-phosphate cytidylyltransferase 2;locus_tag=GCA000160335_00195;product=Ribitol-5-phosphate cytidylyltransferase 2;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI2;Parent=GCA000160335_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000638469.1,SO:0001217,UniParc:UPI00003B137B,UniRef:UniRef100_Q6GK63,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q6GK63;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	241653	242678	.	+	.	ID=GCA000160335_00196_gene;locus_tag=GCA000160335_00196;gene=tarJ'
contig_1	Pyrodigal	CDS	241653	242678	.	+	0	ID=GCA000160335_00196;Name=Ribulose-5-phosphate reductase 2;locus_tag=GCA000160335_00196;product=Ribulose-5-phosphate reductase 2;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ';Parent=GCA000160335_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610169.1,SO:0001217,UniParc:UPI000197A871,UniRef:UniRef100_A0A7Z7QWK8,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1C4;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	242700	244394	.	+	.	ID=GCA000160335_00197_gene;locus_tag=GCA000160335_00197;gene=tarL
contig_1	Pyrodigal	CDS	242700	244394	.	+	0	ID=GCA000160335_00197;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000160335_00197;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000160335_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000167999.1,SO:0001217,UniParc:UPI0001B70133,UniRef:UniRef100_UPI0001B70133,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1C2;ec_number=2.7.8.14
contig_1	Infernal	gene	244729	244950	.	-	.	ID=GCA000160335_00198_gene;locus_tag=GCA000160335_00198;gene=tsr24
contig_1	Infernal	ncRNA	244729	244950	3e-17	-	.	ID=GCA000160335_00198;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_00198;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_00198_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Infernal	gene	244853	245090	.	+	.	ID=GCA000160335_00199_gene;locus_tag=GCA000160335_00199;gene=S35
contig_1	Infernal	ncRNA	244853	245090	4.4e-18	+	.	ID=GCA000160335_00199;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00199;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00199_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	245364	246533	.	+	.	ID=GCA000160335_00200_gene;locus_tag=GCA000160335_00200;gene=tarF
contig_1	Pyrodigal	CDS	245364	246533	.	+	0	ID=GCA000160335_00200;Name=teichoic acid glycerol-phosphate transferase TarF;locus_tag=GCA000160335_00200;product=teichoic acid glycerol-phosphate transferase TarF;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarF;Parent=GCA000160335_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000598264.1,SO:0001217,UniParc:UPI00003B137F,UniRef:UniRef100_A0A7Z7QWN7,UniRef:UniRef50_Q2G1C1,UniRef:UniRef90_Q2G1C1;ec_number=2.7.8.45
contig_1	Pyrodigal	gene	246809	247525	.	+	.	ID=GCA000160335_00201_gene;locus_tag=GCA000160335_00201;gene=tarI1
contig_1	Pyrodigal	CDS	246809	247525	.	+	0	ID=GCA000160335_00201;Name=Ribitol-5-phosphate cytidylyltransferase 1;locus_tag=GCA000160335_00201;product=Ribitol-5-phosphate cytidylyltransferase 1;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI1;Parent=GCA000160335_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000872486.1,SO:0001217,UniParc:UPI0000054682,UniRef:UniRef100_Q2G1C0,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q2G1C0;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	247518	248543	.	+	.	ID=GCA000160335_00202_gene;locus_tag=GCA000160335_00202;gene=tarJ
contig_1	Pyrodigal	CDS	247518	248543	.	+	0	ID=GCA000160335_00202;Name=Ribulose-5-phosphate reductase 1;locus_tag=GCA000160335_00202;product=Ribulose-5-phosphate reductase 1;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ;Parent=GCA000160335_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610203.1,SO:0001217,UniParc:UPI00000D9C01,UniRef:UniRef100_Q2G1B9,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1B9;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	248565	250253	.	+	.	ID=GCA000160335_00203_gene;locus_tag=GCA000160335_00203;gene=tarL
contig_1	Pyrodigal	CDS	248565	250253	.	+	0	ID=GCA000160335_00203;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000160335_00203;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000160335_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000240920.1,SO:0001217,UniParc:UPI00000D789A,UniRef:UniRef100_Q2G1B8,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1B8;ec_number=2.7.8.14
contig_1	Pyrodigal	gene	250286	252010	.	+	.	ID=GCA000160335_00204_gene;locus_tag=GCA000160335_00204;gene=tarS
contig_1	Pyrodigal	CDS	250286	252010	.	+	0	ID=GCA000160335_00204;Name=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;locus_tag=GCA000160335_00204;product=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;Dbxref=GO:0016757,GO:0019350,GO:0046677,GO:0046872,GO:0071555;gene=tarS;Parent=GCA000160335_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000975351,COG:COG0463,COG:M,RefSeq:WP_000975347.1,SO:0001217,UniParc:UPI00003B1380,UniRef:UniRef100_A0A7Z7QX09,UniRef:UniRef50_A0A0H3JPC6,UniRef:UniRef90_A0A0H3JPC6;ec_number=2.4.1.355
contig_1	Pyrodigal	gene	252150	252824	.	+	.	ID=GCA000160335_00205_gene;locus_tag=GCA000160335_00205;gene=scdA
contig_1	Pyrodigal	CDS	252150	252824	.	+	0	ID=GCA000160335_00205;Name=iron-sulfur cluster repair di-iron protein ScdA;locus_tag=GCA000160335_00205;product=iron-sulfur cluster repair di-iron protein ScdA;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0046872,GO:0051409;gene=scdA;Parent=GCA000160335_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2846,COG:O,RefSeq:WP_000608835.1,SO:0001217,UniParc:UPI00003B1381,UniRef:UniRef100_Q6GK53,UniRef:UniRef50_P72360,UniRef:UniRef90_P72360
contig_1	Pyrodigal	gene	253075	254829	.	+	.	ID=GCA000160335_00206_gene;locus_tag=GCA000160335_00206;gene=lytS
contig_1	Pyrodigal	CDS	253075	254829	.	+	0	ID=GCA000160335_00206;Name=Sensor histidine kinase/phosphatase LytS;locus_tag=GCA000160335_00206;product=Sensor histidine kinase/phosphatase LytS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0016787,GO:0071555;gene=lytS;Parent=GCA000160335_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3275,COG:T,KEGG:K07704,RefSeq:WP_000950282.1,SO:0001217,UniParc:UPI00003B1382,UniRef:UniRef100_Q6GK52,UniRef:UniRef50_Q53705,UniRef:UniRef90_Q53705;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	254832	255572	.	+	.	ID=GCA000160335_00207_gene;locus_tag=GCA000160335_00207;gene=lytR
contig_1	Pyrodigal	CDS	254832	255572	.	+	0	ID=GCA000160335_00207;Name=response regulator transcription factor LytR;locus_tag=GCA000160335_00207;product=response regulator transcription factor LytR;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytR;Parent=GCA000160335_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,RefSeq:WP_000645453.1,SO:0001217,UniParc:UPI00003B1383,UniRef:UniRef100_Q6GK51,UniRef:UniRef50_P60611,UniRef:UniRef90_P60611
contig_1	Pyrodigal	gene	255691	256128	.	+	.	ID=GCA000160335_00208_gene;locus_tag=GCA000160335_00208;gene=lrgA
contig_1	Pyrodigal	CDS	255691	256128	.	+	0	ID=GCA000160335_00208;Name=antiholin-like murein hydrolase modulator LrgA;locus_tag=GCA000160335_00208;product=antiholin-like murein hydrolase modulator LrgA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgA;Parent=GCA000160335_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001792906,COG:COG1380,COG:R,KEGG:K05338,SO:0001217,UniParc:UPI00000CABD5,UniRef:UniRef100_P60649,UniRef:UniRef50_P72358,UniRef:UniRef90_P72358
contig_1	Pyrodigal	gene	256121	256822	.	+	.	ID=GCA000160335_00209_gene;locus_tag=GCA000160335_00209;gene=lrgB
contig_1	Pyrodigal	CDS	256121	256822	.	+	0	ID=GCA000160335_00209;Name=antiholin-like protein LrgB;locus_tag=GCA000160335_00209;product=antiholin-like protein LrgB;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgB;Parent=GCA000160335_00209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,KEGG:K05339,RefSeq:WP_000607067.1,SO:0001217,UniParc:UPI0000054679,UniRef:UniRef100_P60643,UniRef:UniRef50_P60643,UniRef:UniRef90_P60643
contig_1	Pyrodigal	gene	257163	259454	.	+	.	ID=GCA000160335_00210_gene;locus_tag=GCA000160335_00210
contig_1	Pyrodigal	CDS	257163	259454	.	+	0	ID=GCA000160335_00210;Name=Nitric oxide reductase;locus_tag=GCA000160335_00210;product=Nitric oxide reductase;Parent=GCA000160335_00210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000062636.1,SO:0001217,UniParc:UPI00003B1384,UniRef:UniRef100_A0A7Z7QWL0,UniRef:UniRef50_A0A2S6D3B7,UniRef:UniRef90_A0A2S6D3B7
contig_1	Pyrodigal	gene	259680	260384	.	-	.	ID=GCA000160335_00211_gene;locus_tag=GCA000160335_00211;gene=mngR
contig_1	Pyrodigal	CDS	259680	260384	.	-	0	ID=GCA000160335_00211;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000160335_00211;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000160335_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03489,RefSeq:WP_000922328.1,SO:0001217,UniParc:UPI00003B1385,UniRef:UniRef100_A0A7Z7QX15,UniRef:UniRef50_Q2G1B1,UniRef:UniRef90_Q2G1B1
contig_1	Pyrodigal	gene	260531	261322	.	+	.	ID=GCA000160335_00212_gene;locus_tag=GCA000160335_00212
contig_1	Pyrodigal	CDS	260531	261322	.	+	0	ID=GCA000160335_00212;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000160335_00212;product=PTS system glucose-specific EIIA component;Parent=GCA000160335_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000527262.1,SO:0001217,UniParc:UPI00003B1386,UniRef:UniRef100_A0A0E1XKA3,UniRef:UniRef50_A0A389V698,UniRef:UniRef90_A0A0E1XKA3
contig_1	Pyrodigal	gene	261338	262774	.	+	.	ID=GCA000160335_00213_gene;locus_tag=GCA000160335_00213;gene=bglB
contig_1	Pyrodigal	CDS	261338	262774	.	+	0	ID=GCA000160335_00213;Name=6-phospho-beta-glucosidase%2C putative;locus_tag=GCA000160335_00213;product=6-phospho-beta-glucosidase%2C putative;gene=bglB;Parent=GCA000160335_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000163995.1,SO:0001217,UniParc:UPI000197AACF,UniRef:UniRef100_A0A7Z7QWL3,UniRef:UniRef50_Q46829,UniRef:UniRef90_Q2G1A9
contig_1	Infernal	gene	262813	263076	.	-	.	ID=GCA000160335_00214_gene;locus_tag=GCA000160335_00214;gene=S35
contig_1	Infernal	ncRNA	262813	263076	1.4e-16	-	.	ID=GCA000160335_00214;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00214;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00214_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	263269	264030	.	-	.	ID=GCA000160335_00215_gene;locus_tag=GCA000160335_00215;gene=ubiE
contig_1	Pyrodigal	CDS	263269	264030	.	-	0	ID=GCA000160335_00215;Name=SAM-dependent methyltransferase;locus_tag=GCA000160335_00215;product=SAM-dependent methyltransferase;gene=ubiE;Parent=GCA000160335_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000031265.1,SO:0001217,UniParc:UPI00003B1388,UniRef:UniRef100_A0A131JTX0,UniRef:UniRef50_A0A131JTX0,UniRef:UniRef90_A0A131JTX0
contig_1	Pyrodigal	gene	264281	265195	.	-	.	ID=GCA000160335_00216_gene;locus_tag=GCA000160335_00216;gene=rbsK
contig_1	Pyrodigal	CDS	264281	265195	.	-	0	ID=GCA000160335_00216;Name=ribokinase;locus_tag=GCA000160335_00216;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0019303,GO:0046872;gene=rbsK;Parent=GCA000160335_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_000182742.1,SO:0001217,UniParc:UPI00003B1389,UniRef:UniRef100_A0A7Z7QX37,UniRef:UniRef50_A0A0H2WZY4,UniRef:UniRef90_A0A0H2WZY4;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	265223	265627	.	-	.	ID=GCA000160335_00217_gene;locus_tag=GCA000160335_00217;gene=rbsD
contig_1	Pyrodigal	CDS	265223	265627	.	-	0	ID=GCA000160335_00217;Name=D-ribose pyranase;locus_tag=GCA000160335_00217;product=D-ribose pyranase;Dbxref=GO:0005829,GO:0016872,GO:0019303,GO:0048029,GO:0062193;gene=rbsD;Parent=GCA000160335_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1869,COG:G,KEGG:K06726,RefSeq:WP_000747873.1,SO:0001217,UniParc:UPI0000054673,UniRef:UniRef100_Q2G1A5,UniRef:UniRef50_Q2G1A5,UniRef:UniRef90_Q2G1A5;ec_number=5.4.99.62
contig_1	Pyrodigal	gene	265642	266523	.	-	.	ID=GCA000160335_00218_gene;locus_tag=GCA000160335_00218;gene=rbsU
contig_1	Pyrodigal	CDS	265642	266523	.	-	0	ID=GCA000160335_00218;Name=ribose transporter RbsU;locus_tag=GCA000160335_00218;product=ribose transporter RbsU;Dbxref=GO:0005886,GO:0015144,GO:0015591,GO:0015752;gene=rbsU;Parent=GCA000160335_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000029204,COG:COG4975,COG:G,KEGG:K06216,RefSeq:WP_000029204.1,SO:0001217,UniParc:UPI00000D9C0B,UniRef:UniRef100_Q5HJA6,UniRef:UniRef50_Q8CN16,UniRef:UniRef90_P60946
contig_1	Pyrodigal	gene	266755	267753	.	-	.	ID=GCA000160335_00219_gene;locus_tag=GCA000160335_00219;gene=rbsR
contig_1	Pyrodigal	CDS	266755	267753	.	-	0	ID=GCA000160335_00219;Name=ribose utilization transcriptional repressor RbsR;locus_tag=GCA000160335_00219;product=ribose utilization transcriptional repressor RbsR;gene=rbsR;Parent=GCA000160335_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000757884.1,SO:0001217,UniParc:UPI00000D9C0C,UniRef:UniRef100_A0A7Z7W0K5,UniRef:UniRef50_Q2G1A3,UniRef:UniRef90_Q2G1A3
contig_1	Pyrodigal	gene	268133	268525	.	+	.	ID=GCA000160335_00220_gene;locus_tag=GCA000160335_00220
contig_1	Pyrodigal	CDS	268133	268525	.	+	0	ID=GCA000160335_00220;Name=Phage protein;locus_tag=GCA000160335_00220;product=Phage protein;Parent=GCA000160335_00220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001159764.1,SO:0001217,UniParc:UPI00003B138B,UniRef:UniRef100_A0A7Z7W0P2,UniRef:UniRef50_Q5HRD5,UniRef:UniRef90_A0A7U7JSC9
contig_1	Pyrodigal	gene	268654	270030	.	-	.	ID=GCA000160335_00221_gene;locus_tag=GCA000160335_00221;gene=uhpC
contig_1	Pyrodigal	CDS	268654	270030	.	-	0	ID=GCA000160335_00221;Name=Quinolone resistance protein NorB;locus_tag=GCA000160335_00221;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000160335_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001066551.1,SO:0001217,UniParc:UPI00003B138C,UniRef:UniRef100_A0A7Z7W0V2,UniRef:UniRef50_A0A115E5S9,UniRef:UniRef90_A0A115E5S9
contig_1	Pyrodigal	gene	270264	271256	.	+	.	ID=GCA000160335_00222_gene;locus_tag=GCA000160335_00222;gene=yxeI
contig_1	Pyrodigal	CDS	270264	271256	.	+	0	ID=GCA000160335_00222;Name=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;locus_tag=GCA000160335_00222;product=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;gene=yxeI;Parent=GCA000160335_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3049,COG:MR,RefSeq:WP_000337379.1,SO:0001217,UniParc:UPI00003B138D,UniRef:UniRef100_A0A7Z7W0J6,UniRef:UniRef50_Q2G198,UniRef:UniRef90_Q2G198
contig_1	Pyrodigal	gene	271582	272532	.	+	.	ID=GCA000160335_00223_gene;locus_tag=GCA000160335_00223;gene=lytM
contig_1	Pyrodigal	CDS	271582	272532	.	+	0	ID=GCA000160335_00223;Name=glycine-glycine endopeptidase LytM;locus_tag=GCA000160335_00223;product=glycine-glycine endopeptidase LytM;Dbxref=GO:0004222,GO:0005576,GO:0006508,GO:0046872,GO:0071555;gene=lytM;Parent=GCA000160335_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000736798,COG:COG0739,COG:M,KEGG:K08259,RefSeq:WP_000736790.1,SO:0001217,UniParc:UPI00003B138E,UniRef:UniRef100_Q6GK35,UniRef:UniRef50_O33599,UniRef:UniRef90_O33599;ec_number=3.4.24.75
contig_1	Pyrodigal	gene	272584	273243	.	-	.	ID=GCA000160335_00224_gene;locus_tag=GCA000160335_00224;gene=rbbA
contig_1	Pyrodigal	CDS	272584	273243	.	-	0	ID=GCA000160335_00224;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_00224;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000160335_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000570080.1,SO:0001217,UniParc:UPI00003B138F,UniRef:UniRef100_A0A2X2K3Y0,UniRef:UniRef50_Q2G196,UniRef:UniRef90_Q2G196
contig_1	Pyrodigal	gene	273257	274177	.	-	.	ID=GCA000160335_00225_gene;locus_tag=GCA000160335_00225
contig_1	Pyrodigal	CDS	273257	274177	.	-	0	ID=GCA000160335_00225;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000160335_00225;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000160335_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000806123.1,SO:0001217,UniParc:UPI00003B1390,UniRef:UniRef100_A0A7Z7QX24,UniRef:UniRef50_Q2G195,UniRef:UniRef90_Q2G195
contig_1	Pyrodigal	gene	274174	275340	.	-	.	ID=GCA000160335_00226_gene;locus_tag=GCA000160335_00226
contig_1	Pyrodigal	CDS	274174	275340	.	-	0	ID=GCA000160335_00226;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000160335_00226;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000160335_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848773.1,SO:0001217,UniParc:UPI00003B1391,UniRef:UniRef100_A0A7Z7QWG9,UniRef:UniRef50_Q2G194,UniRef:UniRef90_Q2G194
contig_1	Pyrodigal	gene	275408	276931	.	-	.	ID=GCA000160335_00227_gene;locus_tag=GCA000160335_00227
contig_1	Pyrodigal	CDS	275408	276931	.	-	0	ID=GCA000160335_00227;Name=hypothetical protein;locus_tag=GCA000160335_00227;product=hypothetical protein;Parent=GCA000160335_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038530.1,SO:0001217,UniParc:UPI00003B1392,UniRef:UniRef100_A0A7Z7QWN0,UniRef:UniRef50_Q2G193,UniRef:UniRef90_Q2G193
contig_1	Pyrodigal	gene	277261	278163	.	-	.	ID=GCA000160335_00228_gene;locus_tag=GCA000160335_00228
contig_1	Pyrodigal	CDS	277261	278163	.	-	0	ID=GCA000160335_00228;Name=Secretory antigen;locus_tag=GCA000160335_00228;product=Secretory antigen;Parent=GCA000160335_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,SO:0001217,UniParc:UPI0001E071C7,UniRef:UniRef100_A0A658WJQ6,UniRef:UniRef50_A0A658WJQ6,UniRef:UniRef90_A0A658WJQ6
contig_1	Pyrodigal	gene	278402	278695	.	+	.	ID=GCA000160335_00229_gene;locus_tag=GCA000160335_00229;gene=esxA
contig_1	Pyrodigal	CDS	278402	278695	.	+	0	ID=GCA000160335_00229;Name=WXG100 family type VII secretion effector EsxA;locus_tag=GCA000160335_00229;product=WXG100 family type VII secretion effector EsxA;Dbxref=GO:0005576;gene=esxA;Parent=GCA000160335_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001240826,COG:COG4842,COG:V,RefSeq:WP_001240826.1,SO:0001217,UniParc:UPI00000D7884,UniRef:UniRef100_Q2G189,UniRef:UniRef50_Q2G189,UniRef:UniRef90_Q2G189
contig_1	Pyrodigal	gene	278778	281807	.	+	.	ID=GCA000160335_00230_gene;locus_tag=GCA000160335_00230;gene=esaA
contig_1	Pyrodigal	CDS	278778	281807	.	+	0	ID=GCA000160335_00230;Name=type VII secretion system protein EsaA;locus_tag=GCA000160335_00230;product=type VII secretion system protein EsaA;Dbxref=GO:0005886;gene=esaA;Parent=GCA000160335_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000728940.1,SO:0001217,UniParc:UPI00003B1394,UniRef:UniRef100_Q6GK28,UniRef:UniRef50_Q2G188,UniRef:UniRef90_Q2G188,VFDB:VFC0086,VFDB:VFG002406
contig_1	Pyrodigal	gene	281807	282265	.	+	.	ID=GCA000160335_00231_gene;locus_tag=GCA000160335_00231;gene=essA
contig_1	Pyrodigal	CDS	281807	282265	.	+	0	ID=GCA000160335_00231;Name=type VII secretion system protein EssA%2C monotopic membrane protein;locus_tag=GCA000160335_00231;product=type VII secretion system protein EssA%2C monotopic membrane protein;Dbxref=GO:0005886,GO:0009306;gene=essA;Parent=GCA000160335_00231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000928937.1,SO:0001217,UniParc:UPI00003B1395,UniRef:UniRef100_Q6GK27,UniRef:UniRef50_P0C052,UniRef:UniRef90_P0C052,VFDB:VFC0086,VFDB:VFG002404
contig_1	Pyrodigal	gene	282237	282479	.	+	.	ID=GCA000160335_00232_gene;locus_tag=GCA000160335_00232;gene=esaB
contig_1	Pyrodigal	CDS	282237	282479	.	+	0	ID=GCA000160335_00232;Name=type VII secretion protein EsaB;locus_tag=GCA000160335_00232;product=type VII secretion protein EsaB;Dbxref=GO:0005737;gene=esaB;Parent=GCA000160335_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071606,COG:COG5417,COG:U,RefSeq:WP_001071606.1,SO:0001217,UniParc:UPI0000054660,UniRef:UniRef100_Q5HJ88,UniRef:UniRef50_Q5HJ88,UniRef:UniRef90_Q5HJ88
contig_1	Pyrodigal	gene	282492	283832	.	+	.	ID=GCA000160335_00233_gene;locus_tag=GCA000160335_00233;gene=essB
contig_1	Pyrodigal	CDS	282492	283832	.	+	0	ID=GCA000160335_00233;Name=type VII secretion protein EssB;locus_tag=GCA000160335_00233;product=type VII secretion protein EssB;Dbxref=GO:0005886,GO:0009306;gene=essB;Parent=GCA000160335_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4499,COG:U,RefSeq:WP_020967608.1,SO:0001217,UniParc:UPI00038DC45B,UniRef:UniRef100_Q6GK25,UniRef:UniRef50_Q2G185,UniRef:UniRef90_Q2G185
contig_1	Pyrodigal	gene	283849	288297	.	+	.	ID=GCA000160335_00234_gene;locus_tag=GCA000160335_00234;gene=essC
contig_1	Pyrodigal	CDS	283849	288297	.	+	0	ID=GCA000160335_00234;Name=type VII secretion protein EssC;locus_tag=GCA000160335_00234;product=type VII secretion protein EssC;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009306;gene=essC;Parent=GCA000160335_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549303.1,SO:0001217,UniParc:UPI0001B7014A,UniRef:UniRef100_UPI0001B7014A,UniRef:UniRef50_Q2G184,UniRef:UniRef90_Q6GK24
contig_1	Pyrodigal	gene	288300	288566	.	+	.	ID=GCA000160335_00235_gene;locus_tag=GCA000160335_00235
contig_1	Pyrodigal	CDS	288300	288566	.	+	0	ID=GCA000160335_00235;Name=Type VII secretion effector;locus_tag=GCA000160335_00235;product=Type VII secretion effector;Parent=GCA000160335_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000593835.1,SO:0001217,UniParc:UPI00003B1398,UniRef:UniRef100_A0A7Z7W0P8,UniRef:UniRef50_A0A7U7JSM7,UniRef:UniRef90_A0A7U7JSM7
contig_1	Pyrodigal	gene	288589	288984	.	+	.	ID=GCA000160335_00236_gene;locus_tag=GCA000160335_00236
contig_1	Pyrodigal	CDS	288589	288984	.	+	0	ID=GCA000160335_00236;Name=DUF5082 domain-containing protein;locus_tag=GCA000160335_00236;product=DUF5082 domain-containing protein;Parent=GCA000160335_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000066177.1,SO:0001217,UniParc:UPI00003B1399,UniRef:UniRef100_A0A7Z7W0V9,UniRef:UniRef50_A0A7Z7W0V9,UniRef:UniRef90_A0A7Z7W0V9
contig_1	Pyrodigal	gene	289006	290676	.	+	.	ID=GCA000160335_00237_gene;locus_tag=GCA000160335_00237
contig_1	Pyrodigal	CDS	289006	290676	.	+	0	ID=GCA000160335_00237;Name=LXG domain-containing protein;locus_tag=GCA000160335_00237;product=LXG domain-containing protein;Parent=GCA000160335_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000540848.1,SO:0001217,UniParc:UPI00003B139A,UniRef:UniRef100_A0AAJ4YXW3,UniRef:UniRef50_A0A7U7JSC3,UniRef:UniRef90_A0A7U7JSC3
contig_1	Pyrodigal	gene	290692	291336	.	+	.	ID=GCA000160335_00238_gene;locus_tag=GCA000160335_00238
contig_1	Pyrodigal	CDS	290692	291336	.	+	0	ID=GCA000160335_00238;Name=DUF5079 domain-containing protein;locus_tag=GCA000160335_00238;product=DUF5079 domain-containing protein;Parent=GCA000160335_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000701499.1,SO:0001217,UniParc:UPI000197A933,UniRef:UniRef100_A0A7Z7W1R0,UniRef:UniRef50_Q2G192,UniRef:UniRef90_A0A0E1X9W8
contig_1	Pyrodigal	gene	291336	291791	.	+	.	ID=GCA000160335_00239_gene;locus_tag=GCA000160335_00239
contig_1	Pyrodigal	CDS	291336	291791	.	+	0	ID=GCA000160335_00239;Name=DUF5085 domain-containing protein;locus_tag=GCA000160335_00239;product=DUF5085 domain-containing protein;Parent=GCA000160335_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000451775.1,SO:0001217,UniParc:UPI00003B139C,UniRef:UniRef100_A0A7Z7QWN2,UniRef:UniRef50_A0A1S1GSC6,UniRef:UniRef90_A0AA40MHJ9
contig_1	Pyrodigal	gene	291784	292242	.	+	.	ID=GCA000160335_00240_gene;locus_tag=GCA000160335_00240
contig_1	Pyrodigal	CDS	291784	292242	.	+	0	ID=GCA000160335_00240;Name=Phage protein;locus_tag=GCA000160335_00240;product=Phage protein;Parent=GCA000160335_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000360004.1,SO:0001217,UniParc:UPI000197A935,UniRef:UniRef100_A0A7Z7QX50,UniRef:UniRef50_A0A7U7JSC5,UniRef:UniRef90_A0A7U7JSC5
contig_1	Pyrodigal	gene	292266	292853	.	+	.	ID=GCA000160335_00241_gene;locus_tag=GCA000160335_00241
contig_1	Pyrodigal	CDS	292266	292853	.	+	0	ID=GCA000160335_00241;Name=DUF5080 domain-containing protein;locus_tag=GCA000160335_00241;product=DUF5080 domain-containing protein;Parent=GCA000160335_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000583207.1,SO:0001217,UniParc:UPI00003B139E,UniRef:UniRef100_A0A7Z7QWI1,UniRef:UniRef50_Q2G191,UniRef:UniRef90_A0A7U7JSF1
contig_1	Pyrodigal	gene	293031	293249	.	+	.	ID=GCA000160335_00242_gene;locus_tag=GCA000160335_00242
contig_1	Pyrodigal	CDS	293031	293249	.	+	0	ID=GCA000160335_00242;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000160335_00242;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000160335_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431306.1,SO:0001217,UniParc:UPI00000B1441,UniRef:UniRef100_A0A7Z7QWP1,UniRef:UniRef50_A0A1D4LJZ2,UniRef:UniRef90_A0A2K4AI94
contig_1	Pyrodigal	gene	293474	293881	.	+	.	ID=GCA000160335_00243_gene;locus_tag=GCA000160335_00243
contig_1	Pyrodigal	CDS	293474	293881	.	+	0	ID=GCA000160335_00243;Name=TIGR01741 family protein;locus_tag=GCA000160335_00243;product=TIGR01741 family protein;Parent=GCA000160335_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G2Q9,UniRef:UniRef90_UPI00085C3037
contig_1	Pyrodigal	gene	293892	294392	.	+	.	ID=GCA000160335_00244_gene;locus_tag=GCA000160335_00244
contig_1	Pyrodigal	CDS	293892	294392	.	+	0	ID=GCA000160335_00244;Name=Cytosolic protein;locus_tag=GCA000160335_00244;product=Cytosolic protein;Parent=GCA000160335_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142018.1,SO:0001217,UniParc:UPI00000B8FE9,UniRef:UniRef100_A0A7Z7QWS5,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A7Z7QWS5
contig_1	Pyrodigal	gene	294403	294894	.	+	.	ID=GCA000160335_00245_gene;locus_tag=GCA000160335_00245
contig_1	Pyrodigal	CDS	294403	294894	.	+	0	ID=GCA000160335_00245;Name=putative conserved protein;locus_tag=GCA000160335_00245;product=putative conserved protein;Parent=GCA000160335_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141954.1,SO:0001217,UniParc:UPI0001BE5BE7,UniRef:UniRef100_A0A113JKX0,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A113JKX0
contig_1	Pyrodigal	gene	295187	295660	.	+	.	ID=GCA000160335_00246_gene;locus_tag=GCA000160335_00246
contig_1	Pyrodigal	CDS	295187	295660	.	+	0	ID=GCA000160335_00246;Name=DUF5083 domain-containing protein;locus_tag=GCA000160335_00246;product=DUF5083 domain-containing protein;Parent=GCA000160335_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000411304.1,SO:0001217,UniParc:UPI000197AAAC,UniRef:UniRef100_A0A131JS57,UniRef:UniRef50_A0A1J3ZZ03,UniRef:UniRef90_A0A5S9I360
contig_1	Pyrodigal	gene	295675	296049	.	+	.	ID=GCA000160335_00247_gene;locus_tag=GCA000160335_00247
contig_1	Pyrodigal	CDS	295675	296049	.	+	0	ID=GCA000160335_00247;Name=DUF4467 domain-containing protein;locus_tag=GCA000160335_00247;product=DUF4467 domain-containing protein;Parent=GCA000160335_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825544.1,SO:0001217,UniParc:UPI000197AAAD,UniRef:UniRef100_A0A7Z7QXD2,UniRef:UniRef50_A0A853V6S0,UniRef:UniRef90_A0A7U7JSN0
contig_1	Pyrodigal	gene	296067	296456	.	+	.	ID=GCA000160335_00248_gene;locus_tag=GCA000160335_00248
contig_1	Pyrodigal	CDS	296067	296456	.	+	0	ID=GCA000160335_00248;Name=DUF4064 domain-containing protein;locus_tag=GCA000160335_00248;product=DUF4064 domain-containing protein;Parent=GCA000160335_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000413100.1,SO:0001217,UniParc:UPI000197AAAE,UniRef:UniRef100_A0A7Z7QX51,UniRef:UniRef50_A0A1J3ZXP2,UniRef:UniRef90_A0A7Z7QX51
contig_1	Pyrodigal	gene	296458	296850	.	+	.	ID=GCA000160335_00249_gene;locus_tag=GCA000160335_00249
contig_1	Pyrodigal	CDS	296458	296850	.	+	0	ID=GCA000160335_00249;Name=DUF5084 domain-containing protein;locus_tag=GCA000160335_00249;product=DUF5084 domain-containing protein;Parent=GCA000160335_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000878110.1,SO:0001217,UniParc:UPI000197AAAF,UniRef:UniRef100_A0A7Z7W0L9,UniRef:UniRef50_A0A7Z7W0L9,UniRef:UniRef90_A0A7Z7W0L9
contig_1	Pyrodigal	gene	297366	297866	.	+	.	ID=GCA000160335_00250_gene;locus_tag=GCA000160335_00250
contig_1	Pyrodigal	CDS	297366	297866	.	+	0	ID=GCA000160335_00250;Name=Cytosolic protein;locus_tag=GCA000160335_00250;product=Cytosolic protein;Parent=GCA000160335_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141995.1,SO:0001217,UniParc:UPI00019F4E0A,UniRef:UniRef100_A0A7Z7W0Q9,UniRef:UniRef50_Q2G2Q5,UniRef:UniRef90_A0A2C9TRD9
contig_1	Pyrodigal	gene	297938	298234	.	+	.	ID=GCA000160335_00251_gene;locus_tag=GCA000160335_00251
contig_1	Pyrodigal	CDS	297938	298234	.	+	0	ID=GCA000160335_00251;Name=DUF600 domain-containing protein;locus_tag=GCA000160335_00251;product=DUF600 domain-containing protein;Parent=GCA000160335_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A113XY15,UniRef:UniRef90_A0A113XY15
contig_1	Pyrodigal	gene	298377	298877	.	+	.	ID=GCA000160335_00252_gene;locus_tag=GCA000160335_00252
contig_1	Pyrodigal	CDS	298377	298877	.	+	0	ID=GCA000160335_00252;Name=Cytosolic protein;locus_tag=GCA000160335_00252;product=Cytosolic protein;Parent=GCA000160335_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142157.1,SO:0001217,UniParc:UPI0001BE5BE8,UniRef:UniRef100_A0A0Z0QHT4,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A7U7PY06
contig_1	Pyrodigal	gene	298888	299160	.	+	.	ID=GCA000160335_00253_gene;locus_tag=GCA000160335_00253
contig_1	Pyrodigal	CDS	298888	299160	.	+	0	ID=GCA000160335_00253;Name=Cytosolic protein;locus_tag=GCA000160335_00253;product=Cytosolic protein;Parent=GCA000160335_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000197AB4B,UniRef:UniRef100_A0A7Z7W0L0,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A7Z7W0L0
contig_1	Pyrodigal	gene	299287	299376	.	+	.	ID=GCA000160335_00254_gene;locus_tag=GCA000160335_00254
contig_1	Pyrodigal	CDS	299287	299376	.	+	0	ID=GCA000160335_00254;Name=TIGR01741 family protein;locus_tag=GCA000160335_00254;product=TIGR01741 family protein;Parent=GCA000160335_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000197AA29,UniRef:UniRef100_A0A7Z7W1S2,UniRef:UniRef50_Q2G2Q9,UniRef:UniRef90_A0AAE6EY68
contig_1	Bakta	gene	299998	300087	.	+	.	ID=GCA000160335_00255_gene;locus_tag=GCA000160335_00255;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	299998	300087	.	+	0	ID=GCA000160335_00255;Name=Lipoprotein;locus_tag=GCA000160335_00255;product=Lipoprotein;Parent=GCA000160335_00255_gene;Note=SO:0001217,UniParc:UPI0002B8DC15,UniRef:UniRef100_A0A8S1I9N6,UniRef:UniRef50_A0A8S1I9N6,UniRef:UniRef90_A0A8S1I9N6
contig_1	Pyrodigal	gene	300062	300373	.	+	.	ID=GCA000160335_00256_gene;locus_tag=GCA000160335_00256
contig_1	Pyrodigal	CDS	300062	300373	.	+	0	ID=GCA000160335_00256;Name=DUF4467 domain-containing protein;locus_tag=GCA000160335_00256;product=DUF4467 domain-containing protein;Parent=GCA000160335_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4E08,UniRef:UniRef100_A0A7Z7QWP3,UniRef:UniRef50_Q2G174,UniRef:UniRef90_A0A7Z7QWP3
contig_1	Pyrodigal	gene	300523	300834	.	+	.	ID=GCA000160335_00257_gene;locus_tag=GCA000160335_00257
contig_1	Pyrodigal	CDS	300523	300834	.	+	0	ID=GCA000160335_00257;Name=Membrane protein;locus_tag=GCA000160335_00257;product=Membrane protein;Parent=GCA000160335_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8G2HZZ3,UniRef:UniRef90_A0A8G2HZZ3
contig_1	Pyrodigal	gene	301172	301996	.	-	.	ID=GCA000160335_00258_gene;locus_tag=GCA000160335_00258;gene=focA
contig_1	Pyrodigal	CDS	301172	301996	.	-	0	ID=GCA000160335_00258;Name=Formate/nitrite transporter;locus_tag=GCA000160335_00258;product=Formate/nitrite transporter;gene=focA;Parent=GCA000160335_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000659770.1,SO:0001217,UniParc:UPI00000D7745,UniRef:UniRef100_Q2G172,UniRef:UniRef50_Q2G172,UniRef:UniRef90_Q2G172
contig_1	Pyrodigal	gene	302233	303540	.	-	.	ID=GCA000160335_00259_gene;locus_tag=GCA000160335_00259;gene=brnQ
contig_1	Pyrodigal	CDS	302233	303540	.	-	0	ID=GCA000160335_00259;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000160335_00259;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000160335_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,RefSeq:WP_000745110.1,SO:0001217,UniParc:UPI00003B13A2,UniRef:UniRef100_A0A7Z7QWQ3,UniRef:UniRef50_A0A391ES74,UniRef:UniRef90_A0A391ES74
contig_1	Pyrodigal	gene	304124	305014	.	+	.	ID=GCA000160335_00260_gene;locus_tag=GCA000160335_00260
contig_1	Pyrodigal	CDS	304124	305014	.	+	0	ID=GCA000160335_00260;Name=5'-nucleotidase%2C lipoprotein e(P4) family;locus_tag=GCA000160335_00260;product=5'-nucleotidase%2C lipoprotein e(P4) family;Dbxref=GO:0009279;Parent=GCA000160335_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2503,COG:R,RefSeq:WP_001033875.1,SO:0001217,UniParc:UPI00003B13A3,UniRef:UniRef100_A0A7Z7QWI7,UniRef:UniRef50_B9DL66,UniRef:UniRef90_A0A077UG02
contig_1	Pyrodigal	gene	305263	306312	.	+	.	ID=GCA000160335_00261_gene;locus_tag=GCA000160335_00261;gene=hrtB
contig_1	Pyrodigal	CDS	305263	306312	.	+	0	ID=GCA000160335_00261;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000160335_00261;product=Putative hemin transport system permease protein HrtB;gene=hrtB;Parent=GCA000160335_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_000477931.1,SO:0001217,UniParc:UPI00000D782C,UniRef:UniRef100_A0A7Z7QWT3,UniRef:UniRef50_Q2G168,UniRef:UniRef90_Q2G168
contig_1	Pyrodigal	gene	306325	307002	.	+	.	ID=GCA000160335_00262_gene;locus_tag=GCA000160335_00262;gene=hrtA
contig_1	Pyrodigal	CDS	306325	307002	.	+	0	ID=GCA000160335_00262;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000160335_00262;product=Putative hemin import ATP-binding protein HrtA;gene=hrtA;Parent=GCA000160335_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000911014.1,SO:0001217,UniParc:UPI000197AA2A,UniRef:UniRef100_A0A0Y9VH18,UniRef:UniRef50_A0A0Y9VH18,UniRef:UniRef90_A0A0Y9VH18
contig_1	Pyrodigal	gene	307210	308241	.	+	.	ID=GCA000160335_00263_gene;locus_tag=GCA000160335_00263;gene=frwC
contig_1	Pyrodigal	CDS	307210	308241	.	+	0	ID=GCA000160335_00263;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000160335_00263;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000160335_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,SO:0001217,UniParc:UPI00003B13A6,UniRef:UniRef100_A0A0E1XC43,UniRef:UniRef50_Q2G165,UniRef:UniRef90_Q2G165
contig_1	Pyrodigal	gene	308584	309702	.	+	.	ID=GCA000160335_00264_gene;locus_tag=GCA000160335_00264
contig_1	Pyrodigal	CDS	308584	309702	.	+	0	ID=GCA000160335_00264;Name=Ribokinase;locus_tag=GCA000160335_00264;product=Ribokinase;Parent=GCA000160335_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001283968.1,SO:0001217,UniParc:UPI00000CAE3E,UniRef:UniRef100_A0A7U7EXP1,UniRef:UniRef50_K1L4B1,UniRef:UniRef90_A0A7I8NL06
contig_1	Pyrodigal	gene	309677	310600	.	+	.	ID=GCA000160335_00265_gene;locus_tag=GCA000160335_00265;gene=psuG
contig_1	Pyrodigal	CDS	309677	310600	.	+	0	ID=GCA000160335_00265;Name=Pseudouridine-5'-phosphate glycosidase;locus_tag=GCA000160335_00265;product=Pseudouridine-5'-phosphate glycosidase;Dbxref=GO:0004730,GO:0005737,GO:0016798,GO:0046113,GO:0046872;gene=psuG;Parent=GCA000160335_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2313,COG:F,RefSeq:WP_000002080.1,SO:0001217,UniParc:UPI00003B13A7,UniRef:UniRef100_A0A7Z7QX60,UniRef:UniRef50_Q28PY7,UniRef:UniRef90_Q8NYD0;ec_number=4.2.1.70
contig_1	Pyrodigal	gene	310611	311831	.	+	.	ID=GCA000160335_00266_gene;locus_tag=GCA000160335_00266;gene=nupC
contig_1	Pyrodigal	CDS	310611	311831	.	+	0	ID=GCA000160335_00266;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000160335_00266;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000160335_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_001022980.1,SO:0001217,UniParc:UPI00019F4E06,UniRef:UniRef100_A0A7Z7W0M0,UniRef:UniRef50_Q2G162,UniRef:UniRef90_Q2G162
contig_1	Pyrodigal	gene	311936	313468	.	-	.	ID=GCA000160335_00267_gene;locus_tag=GCA000160335_00267;gene=putP
contig_1	Pyrodigal	CDS	311936	313468	.	-	0	ID=GCA000160335_00267;Name=Na+/proline symporter;locus_tag=GCA000160335_00267;product=Na+/proline symporter;gene=putP;Parent=GCA000160335_00267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000665741.1,SO:0001217,UniParc:UPI00003B13A9,UniRef:UniRef100_A0A7Z7W0R4,UniRef:UniRef50_Q2G161,UniRef:UniRef90_Q2G161
contig_1	Pyrodigal	gene	313508	314389	.	-	.	ID=GCA000160335_00268_gene;locus_tag=GCA000160335_00268;gene=nanA
contig_1	Pyrodigal	CDS	313508	314389	.	-	0	ID=GCA000160335_00268;Name=N-acetylneuraminate lyase;locus_tag=GCA000160335_00268;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA000160335_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_001030738.1,SO:0001217,UniParc:UPI0000054599,UniRef:UniRef100_Q2G160,UniRef:UniRef50_Q2G160,UniRef:UniRef90_Q2G160;ec_number=4.1.3.3
contig_1	Pyrodigal	gene	314547	315407	.	+	.	ID=GCA000160335_00269_gene;locus_tag=GCA000160335_00269;gene=nagC
contig_1	Pyrodigal	CDS	314547	315407	.	+	0	ID=GCA000160335_00269;Name=Glucokinase;locus_tag=GCA000160335_00269;product=Glucokinase;gene=nagC;Parent=GCA000160335_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000291432.1,SO:0001217,UniParc:UPI00003B13AA,UniRef:UniRef100_A0A7Z7W0L4,UniRef:UniRef50_A0A2K4AIW7,UniRef:UniRef90_A0A2K4AIW7
contig_1	Pyrodigal	gene	315684	316484	.	-	.	ID=GCA000160335_00270_gene;locus_tag=GCA000160335_00270;gene=rpiR
contig_1	Pyrodigal	CDS	315684	316484	.	-	0	ID=GCA000160335_00270;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000160335_00270;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000160335_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000667382.1,SO:0001217,UniParc:UPI0000054596,UniRef:UniRef100_Q2G158,UniRef:UniRef50_Q2G158,UniRef:UniRef90_Q2G158
contig_1	Pyrodigal	gene	316624	317292	.	+	.	ID=GCA000160335_00271_gene;locus_tag=GCA000160335_00271;gene=nanE
contig_1	Pyrodigal	CDS	316624	317292	.	+	0	ID=GCA000160335_00271;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000160335_00271;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Dbxref=GO:0005829,GO:0005975,GO:0006053,GO:0019262,GO:0047465;gene=nanE;Parent=GCA000160335_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_000936720.1,SO:0001217,UniParc:UPI0000054595,UniRef:UniRef100_Q2G157,UniRef:UniRef50_Q8XNZ3,UniRef:UniRef90_Q2G157;ec_number=5.1.3.9
contig_1	Pyrodigal	gene	317418	318779	.	-	.	ID=GCA000160335_00272_gene;locus_tag=GCA000160335_00272;gene=spoVV
contig_1	Pyrodigal	CDS	317418	318779	.	-	0	ID=GCA000160335_00272;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000160335_00272;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000160335_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,SO:0001217,UniParc:UPI0001B7016B,UniRef:UniRef100_A0A0E1XK53,UniRef:UniRef50_Q2G156,UniRef:UniRef90_Q2G156
contig_1	Pyrodigal	gene	319148	321223	.	+	.	ID=GCA000160335_00273_gene;locus_tag=GCA000160335_00273;gene=geh
contig_1	Pyrodigal	CDS	319148	321223	.	+	0	ID=GCA000160335_00273;Name=glycerol ester hydrolase;locus_tag=GCA000160335_00273;product=glycerol ester hydrolase;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=geh;Parent=GCA000160335_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1075,COG:I,KEGG:K01046,RefSeq:WP_000943842.1,SO:0001217,UniParc:UPI00003B13AC,UniRef:UniRef100_Q6GJZ6,UniRef:UniRef50_Q99WQ6,UniRef:UniRef90_Q99WQ6,VFDB:VFC0251,VFDB:VFG001316;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	321465	322292	.	-	.	ID=GCA000160335_00274_gene;locus_tag=GCA000160335_00274;gene=aes
contig_1	Pyrodigal	CDS	321465	322292	.	-	0	ID=GCA000160335_00274;Name=BD-FAE-like domain-containing protein;locus_tag=GCA000160335_00274;product=BD-FAE-like domain-containing protein;gene=aes;Parent=GCA000160335_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000136022.1,SO:0001217,UniParc:UPI00003B13AD,UniRef:UniRef100_A0A7Z7QWR0,UniRef:UniRef50_Q2G154,UniRef:UniRef90_Q2G154
contig_1	Pyrodigal	gene	322350	323564	.	-	.	ID=GCA000160335_00275_gene;locus_tag=GCA000160335_00275;gene=fadH
contig_1	Pyrodigal	CDS	322350	323564	.	-	0	ID=GCA000160335_00275;Name=NADH-dependent flavin oxidoreductase;locus_tag=GCA000160335_00275;product=NADH-dependent flavin oxidoreductase;gene=fadH;Parent=GCA000160335_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000286469.1,SO:0001217,UniParc:UPI00003B13AE,UniRef:UniRef100_A0A7Z7QWJ7,UniRef:UniRef50_P0DN73,UniRef:UniRef90_A0A2K4AJN2
contig_1	Pyrodigal	gene	323872	324873	.	+	.	ID=GCA000160335_00276_gene;locus_tag=GCA000160335_00276;gene=ssuD
contig_1	Pyrodigal	CDS	323872	324873	.	+	0	ID=GCA000160335_00276;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000160335_00276;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000160335_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000240069.1,SO:0001217,UniParc:UPI00003B13AF,UniRef:UniRef100_A0A7Z7QWU1,UniRef:UniRef50_A0A390B198,UniRef:UniRef90_A0A390B198
contig_1	Pyrodigal	gene	324907	325239	.	+	.	ID=GCA000160335_00277_gene;locus_tag=GCA000160335_00277;gene=gcvH
contig_1	Pyrodigal	CDS	324907	325239	.	+	0	ID=GCA000160335_00277;Name=Glycine cleavage system H-like protein;locus_tag=GCA000160335_00277;product=Glycine cleavage system H-like protein;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000160335_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000731878.1,SO:0001217,UniParc:UPI000005458F,UniRef:UniRef100_A0A0H3JT43,UniRef:UniRef50_P0DN69,UniRef:UniRef90_A0A0H3JT43
contig_1	Pyrodigal	gene	325240	326040	.	+	.	ID=GCA000160335_00278_gene;locus_tag=GCA000160335_00278
contig_1	Pyrodigal	CDS	325240	326040	.	+	0	ID=GCA000160335_00278;Name=protein-ADP-ribose hydrolase;locus_tag=GCA000160335_00278;product=protein-ADP-ribose hydrolase;Dbxref=GO:0016798;Parent=GCA000160335_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449073.1,SO:0001217,UniParc:UPI00003B13B0,UniRef:UniRef100_Q6GJZ1,UniRef:UniRef50_P67343,UniRef:UniRef90_Q6GJZ1;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	326030	326974	.	+	.	ID=GCA000160335_00279_gene;locus_tag=GCA000160335_00279;gene=sIR2
contig_1	Pyrodigal	CDS	326030	326974	.	+	0	ID=GCA000160335_00279;Name=Protein ADP-ribosyltransferase;locus_tag=GCA000160335_00279;product=Protein ADP-ribosyltransferase;Dbxref=GO:0016779,GO:0046872,GO:0140806,GO:1990404;gene=sIR2;Parent=GCA000160335_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_001191936.1,SO:0001217,UniParc:UPI000197A979,UniRef:UniRef100_A0A811I3R6,UniRef:UniRef50_A0A0H3JQ59,UniRef:UniRef90_A0A0H3JQ59;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	326952	327974	.	+	.	ID=GCA000160335_00280_gene;locus_tag=GCA000160335_00280;gene=lplA
contig_1	Pyrodigal	CDS	326952	327974	.	+	0	ID=GCA000160335_00280;Name=Lipoate--protein ligase 2;locus_tag=GCA000160335_00280;product=Lipoate--protein ligase 2;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000160335_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000280814.1,SO:0001217,UniParc:UPI00003B13B2,UniRef:UniRef100_A0A7Z7QX74,UniRef:UniRef50_A0A0H3JX98,UniRef:UniRef90_A0A0H3JX98;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	328290	329315	.	+	.	ID=GCA000160335_00281_gene;locus_tag=GCA000160335_00281;gene=wcaG
contig_1	Pyrodigal	CDS	328290	329315	.	+	0	ID=GCA000160335_00281;Name=3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein;locus_tag=GCA000160335_00281;product=3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein;gene=wcaG;Parent=GCA000160335_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_001060938.1,SO:0001217,UniParc:UPI000197A97A,UniRef:UniRef100_A0A7U7IBZ8,UniRef:UniRef50_A0A0R2AZ52,UniRef:UniRef90_Q2G146
contig_1	Pyrodigal	gene	329409	330755	.	-	.	ID=GCA000160335_00282_gene;locus_tag=GCA000160335_00282;gene=ulaA
contig_1	Pyrodigal	CDS	329409	330755	.	-	0	ID=GCA000160335_00282;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA000160335_00282;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0009401;gene=ulaA;Parent=GCA000160335_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3037,COG:G,KEGG:K03475,RefSeq:WP_001147973.1,SO:0001217,UniParc:UPI00003B13B4,UniRef:UniRef100_A0A454H3A5,UniRef:UniRef50_A0A088T0Z9,UniRef:UniRef90_A0A454H3A5
contig_1	Pyrodigal	gene	330770	331054	.	-	.	ID=GCA000160335_00283_gene;locus_tag=GCA000160335_00283;gene=sgaB
contig_1	Pyrodigal	CDS	330770	331054	.	-	0	ID=GCA000160335_00283;Name=PTS lactose transporter subunit IIB;locus_tag=GCA000160335_00283;product=PTS lactose transporter subunit IIB;gene=sgaB;Parent=GCA000160335_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000699538.1,SO:0001217,UniParc:UPI00000D7893,UniRef:UniRef100_Q2G144,UniRef:UniRef50_A0A2S6D6E6,UniRef:UniRef90_A0A2S6D6E6
contig_1	Pyrodigal	gene	331056	331499	.	-	.	ID=GCA000160335_00284_gene;locus_tag=GCA000160335_00284;gene=ptsN
contig_1	Pyrodigal	CDS	331056	331499	.	-	0	ID=GCA000160335_00284;Name=Ascorbate-specific PTS system EIIA component;locus_tag=GCA000160335_00284;product=Ascorbate-specific PTS system EIIA component;gene=ptsN;Parent=GCA000160335_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000050762.1,SO:0001217,UniParc:UPI00000D9C3C,UniRef:UniRef100_Q2G143,UniRef:UniRef50_A0A391DBH8,UniRef:UniRef90_A0A391DBH8
contig_1	Pyrodigal	gene	331504	333459	.	-	.	ID=GCA000160335_00285_gene;locus_tag=GCA000160335_00285;gene=bglG
contig_1	Pyrodigal	CDS	331504	333459	.	-	0	ID=GCA000160335_00285;Name=BglG family transcription antiterminator;locus_tag=GCA000160335_00285;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000160335_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_000954210.1,SO:0001217,UniParc:UPI0001B70316,UniRef:UniRef100_UPI0001B70316,UniRef:UniRef50_A0A391EL22,UniRef:UniRef90_A0A391EL22
contig_1	Pyrodigal	gene	333671	334090	.	+	.	ID=GCA000160335_00286_gene;locus_tag=GCA000160335_00286;gene=mepR
contig_1	Pyrodigal	CDS	333671	334090	.	+	0	ID=GCA000160335_00286;Name=multidrug efflux transporter transcriptional repressor MepR;locus_tag=GCA000160335_00286;product=multidrug efflux transporter transcriptional repressor MepR;gene=mepR;Parent=GCA000160335_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000397416,COG:COG1846,COG:K,KEGG:K18909,RefSeq:WP_000397416.1,SO:0001217,UniParc:UPI0000054585,UniRef:UniRef100_Q2G141,UniRef:UniRef50_Q2G141,UniRef:UniRef90_Q2G141
contig_1	Pyrodigal	gene	334197	335552	.	+	.	ID=GCA000160335_00287_gene;locus_tag=GCA000160335_00287;gene=mepA
contig_1	Pyrodigal	CDS	334197	335552	.	+	0	ID=GCA000160335_00287;Name=multidrug efflux MATE transporter MepA;locus_tag=GCA000160335_00287;product=multidrug efflux MATE transporter MepA;Dbxref=GO:0005886,GO:0015297,GO:0042910,GO:0046677;gene=mepA;Parent=GCA000160335_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0534,COG:V,KEGG:K18908,NCBIProtein:BAB41547.1,RefSeq:WP_000651040.1,SO:0001217,UniParc:UPI00003B13B6,UniRef:UniRef100_Q6GJY2,UniRef:UniRef50_Q2G140,UniRef:UniRef90_Q2G140
contig_1	Pyrodigal	gene	335658	336095	.	+	.	ID=GCA000160335_00288_gene;locus_tag=GCA000160335_00288
contig_1	Pyrodigal	CDS	335658	336095	.	+	0	ID=GCA000160335_00288;Name=Endonuclease;locus_tag=GCA000160335_00288;product=Endonuclease;Parent=GCA000160335_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000278302.1,SO:0001217,UniParc:UPI0001B70192,UniRef:UniRef100_A0A7Z7QWK6,UniRef:UniRef50_Q2G139,UniRef:UniRef90_A0A2D1CK39
contig_1	Pyrodigal	gene	336104	337051	.	-	.	ID=GCA000160335_00289_gene;locus_tag=GCA000160335_00289;gene=tnp
contig_1	Pyrodigal	CDS	336104	337051	.	-	0	ID=GCA000160335_00289;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_00289;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121211.1,SO:0001217,UniParc:UPI00001833E5,UniRef:UniRef100_Q9MBM9,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	337256	338614	.	-	.	ID=GCA000160335_00290_gene;locus_tag=GCA000160335_00290;gene=glpT
contig_1	Pyrodigal	CDS	337256	338614	.	-	0	ID=GCA000160335_00290;Name=glycerol-3-phosphate transporter;locus_tag=GCA000160335_00290;product=glycerol-3-phosphate transporter;Dbxref=GO:0015169,GO:0015794,GO:0016020;gene=glpT;Parent=GCA000160335_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K02445,RefSeq:WP_001010115.1,SO:0001217,UniParc:UPI00003B13B8,UniRef:UniRef100_A0A7Z7QWR8,UniRef:UniRef50_Q9HTV5,UniRef:UniRef90_Q2G138
contig_1	Pyrodigal	gene	338926	339852	.	+	.	ID=GCA000160335_00291_gene;locus_tag=GCA000160335_00291;gene=gloA
contig_1	Pyrodigal	CDS	338926	339852	.	+	0	ID=GCA000160335_00291;Name=Lactoylglutathione lyase;locus_tag=GCA000160335_00291;product=Lactoylglutathione lyase;gene=gloA;Parent=GCA000160335_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_001028218.1,SO:0001217,UniParc:UPI00003B13B9,UniRef:UniRef100_A0A0E1X9V4,UniRef:UniRef50_A0A077UG87,UniRef:UniRef90_A0A077UG87
contig_1	Pyrodigal	gene	339866	340927	.	+	.	ID=GCA000160335_00292_gene;locus_tag=GCA000160335_00292;gene=ssuD
contig_1	Pyrodigal	CDS	339866	340927	.	+	0	ID=GCA000160335_00292;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000160335_00292;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000160335_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_001086108.1,SO:0001217,UniParc:UPI00003B13BA,UniRef:UniRef100_A0A0E1XK34,UniRef:UniRef50_A0A391E2C4,UniRef:UniRef90_A0A391E2C4
contig_1	Pyrodigal	gene	340941	341078	.	+	.	ID=GCA000160335_00293_gene;locus_tag=GCA000160335_00293
contig_1	Pyrodigal	CDS	340941	341078	.	+	0	ID=GCA000160335_00293;Name=FMN reductase;locus_tag=GCA000160335_00293;product=FMN reductase;Parent=GCA000160335_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD5BA,UniRef:UniRef100_A0A7Z7QWM8,UniRef:UniRef50_A0A7Z7QWM8,UniRef:UniRef90_A0A7Z7QWM8
contig_1	Pyrodigal	gene	341154	341507	.	+	.	ID=GCA000160335_00294_gene;locus_tag=GCA000160335_00294
contig_1	Pyrodigal	CDS	341154	341507	.	+	0	ID=GCA000160335_00294;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000160335_00294;product=FMN-dependent NADPH-azoreductase;Parent=GCA000160335_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002C94A1E,UniRef:UniRef100_A0A7Z7QXG8,UniRef:UniRef50_A0A7Z7QXG8,UniRef:UniRef90_A0A7Z7QXG8
contig_1	Pyrodigal	gene	341567	342562	.	-	.	ID=GCA000160335_00295_gene;locus_tag=GCA000160335_00295;gene=yeiH
contig_1	Pyrodigal	CDS	341567	342562	.	-	0	ID=GCA000160335_00295;Name=UPF0324 membrane protein SACOL0411;locus_tag=GCA000160335_00295;product=UPF0324 membrane protein SACOL0411;Dbxref=GO:0005886;gene=yeiH;Parent=GCA000160335_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,RefSeq:WP_000157627.1,SO:0001217,UniParc:UPI00003B13BB,UniRef:UniRef100_Q6GJX7,UniRef:UniRef50_Q5HRT2,UniRef:UniRef90_Q7A7M5
contig_1	Infernal	gene	342631	342882	.	-	.	ID=GCA000160335_00296_gene;locus_tag=GCA000160335_00296;gene=S35
contig_1	Infernal	ncRNA	342631	342882	3.9e-11	-	.	ID=GCA000160335_00296;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00296;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00296_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	342922	343467	.	+	.	ID=GCA000160335_00297_gene;locus_tag=GCA000160335_00297;gene=rimL
contig_1	Pyrodigal	CDS	342922	343467	.	+	0	ID=GCA000160335_00297;Name=50S ribosomal protein L7 serine acetyltransferase;locus_tag=GCA000160335_00297;product=50S ribosomal protein L7 serine acetyltransferase;gene=rimL;Parent=GCA000160335_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000467645.1,SO:0001217,UniParc:UPI00003B13BC,UniRef:UniRef100_A0A7Z7W0N0,UniRef:UniRef50_A0A2S6DUP1,UniRef:UniRef90_A0A2S6DUP1
contig_1	Pyrodigal	gene	343732	344586	.	+	.	ID=GCA000160335_00298_gene;locus_tag=GCA000160335_00298;gene=efeO
contig_1	Pyrodigal	CDS	343732	344586	.	+	0	ID=GCA000160335_00298;Name=iron uptake system protein EfeO;locus_tag=GCA000160335_00298;product=iron uptake system protein EfeO;Dbxref=GO:0005886,GO:0006826;gene=efeO;Parent=GCA000160335_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2822,COG:P,KEGG:K07224,RefSeq:WP_000737195.1,SO:0001217,UniParc:UPI00019CD5B7,UniRef:UniRef100_A0A7Z7W0S4,UniRef:UniRef50_Q4L8N2,UniRef:UniRef90_Q2G131
contig_1	Pyrodigal	gene	344583	345554	.	+	.	ID=GCA000160335_00299_gene;locus_tag=GCA000160335_00299;gene=efeB;pseudogene=unitary
contig_1	Pyrodigal	CDS	344583	345554	.	+	0	ID=GCA000160335_00299;Name=iron uptake transporter deferrochelatase/peroxidase subunit;locus_tag=GCA000160335_00299;product=iron uptake transporter deferrochelatase/peroxidase subunit;Dbxref=GO:0004601,GO:0020037,GO:0033212;pseudogene=unitary;gene=efeB;Parent=GCA000160335_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2837,COG:P,KEGG:K16301,SO:0001217,UniRef:UniRef50_A0A390V9S3,UniRef:UniRef90_A0A390V9S3;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	345792	347504	.	+	.	ID=GCA000160335_00300_gene;locus_tag=GCA000160335_00300;gene=fTR1
contig_1	Pyrodigal	CDS	345792	347504	.	+	0	ID=GCA000160335_00300;Name=FTR1 family iron permease;locus_tag=GCA000160335_00300;product=FTR1 family iron permease;gene=fTR1;Parent=GCA000160335_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0672,COG:P,RefSeq:WP_000683719.1,SO:0001217,UniParc:UPI00003B13BF,UniRef:UniRef100_A0A0E1XBG6,UniRef:UniRef50_A0A4Z1BRH1,UniRef:UniRef90_Q2G129
contig_1	Pyrodigal	gene	347850	348551	.	-	.	ID=GCA000160335_00301_gene;locus_tag=GCA000160335_00301;gene=tatC
contig_1	Pyrodigal	CDS	347850	348551	.	-	0	ID=GCA000160335_00301;Name=twin-arginine translocase subunit TatC;locus_tag=GCA000160335_00301;product=twin-arginine translocase subunit TatC;Dbxref=GO:0005886,GO:0015628;gene=tatC;Parent=GCA000160335_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,RefSeq:WP_001573569.1,SO:0001217,UniParc:UPI00003B13C0,UniRef:UniRef100_A0A7Z7W1T7,UniRef:UniRef50_A0A2S6D619,UniRef:UniRef90_A0A6B5BEK4
contig_1	Pyrodigal	gene	348568	348783	.	-	.	ID=GCA000160335_00302_gene;locus_tag=GCA000160335_00302;gene=tatA
contig_1	Pyrodigal	CDS	348568	348783	.	-	0	ID=GCA000160335_00302;Name=Sec-independent protein translocase protein TatA;locus_tag=GCA000160335_00302;product=Sec-independent protein translocase protein TatA;gene=tatA;Parent=GCA000160335_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_000632271.1,SO:0001217,UniParc:UPI00000D78AF,UniRef:UniRef100_Q2G127,UniRef:UniRef50_A0A380FX86,UniRef:UniRef90_A0AAN1ZPU7
contig_1	Pyrodigal	gene	348891	349280	.	-	.	ID=GCA000160335_00303_gene;locus_tag=GCA000160335_00303;gene=ybcV
contig_1	Pyrodigal	CDS	348891	349280	.	-	0	ID=GCA000160335_00303;Name=DUF1398 domain-containing protein;locus_tag=GCA000160335_00303;product=DUF1398 domain-containing protein;gene=ybcV;Parent=GCA000160335_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5562,COG:X,RefSeq:WP_000874686.1,SO:0001217,UniParc:UPI00003B13C1,UniRef:UniRef100_A0A7Z7QX93,UniRef:UniRef50_Q2G126,UniRef:UniRef90_Q2G126
contig_1	Pyrodigal	gene	349520	349723	.	+	.	ID=GCA000160335_00304_gene;locus_tag=GCA000160335_00304;gene=xRE
contig_1	Pyrodigal	CDS	349520	349723	.	+	0	ID=GCA000160335_00304;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_00304;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000160335_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001246011.1,SO:0001217,UniParc:UPI00003B13C2,UniRef:UniRef100_A0A7Z7QWL6,UniRef:UniRef50_Q2G1V7,UniRef:UniRef90_Q2G1V7
contig_1	Pyrodigal	gene	349720	350433	.	+	.	ID=GCA000160335_00305_gene;locus_tag=GCA000160335_00305
contig_1	Pyrodigal	CDS	349720	350433	.	+	0	ID=GCA000160335_00305;Name=DUF3169 domain-containing protein;locus_tag=GCA000160335_00305;product=DUF3169 domain-containing protein;Parent=GCA000160335_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000698754.1,SO:0001217,UniParc:UPI00003B13C3,UniRef:UniRef100_A0A7Z7QWS6,UniRef:UniRef50_Q2G1V5,UniRef:UniRef90_Q2G1V5
contig_1	Pyrodigal	gene	350458	351300	.	+	.	ID=GCA000160335_00306_gene;locus_tag=GCA000160335_00306;gene=rbbA
contig_1	Pyrodigal	CDS	350458	351300	.	+	0	ID=GCA000160335_00306;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000160335_00306;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=rbbA;Parent=GCA000160335_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000209478.1,SO:0001217,UniParc:UPI00003B13C4,UniRef:UniRef100_A0A0E1X9T8,UniRef:UniRef50_A0A1D4LL40,UniRef:UniRef90_A0A390TZ70
contig_1	Pyrodigal	gene	351300	351929	.	+	.	ID=GCA000160335_00307_gene;locus_tag=GCA000160335_00307
contig_1	Pyrodigal	CDS	351300	351929	.	+	0	ID=GCA000160335_00307;Name=ABC-2 transporter permease;locus_tag=GCA000160335_00307;product=ABC-2 transporter permease;Parent=GCA000160335_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000677718.1,SO:0001217,UniParc:UPI00003B13C5,UniRef:UniRef100_A0A7Z7QWV9,UniRef:UniRef50_Q2G1V6,UniRef:UniRef90_Q2G1V6
contig_1	Pyrodigal	gene	352298	353431	.	-	.	ID=GCA000160335_00308_gene;locus_tag=GCA000160335_00308;gene=ltrA
contig_1	Pyrodigal	CDS	352298	353431	.	-	0	ID=GCA000160335_00308;Name=Low temperature requirement protein A;locus_tag=GCA000160335_00308;product=Low temperature requirement protein A;gene=ltrA;Parent=GCA000160335_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4292,COG:S,RefSeq:WP_000245695.1,SO:0001217,UniParc:UPI00003B13C6,UniRef:UniRef100_A0A7Z7QXA4,UniRef:UniRef50_Q2G1V3,UniRef:UniRef90_Q2G1V3
contig_1	Pyrodigal	gene	353971	355152	.	+	.	ID=GCA000160335_00309_gene;locus_tag=GCA000160335_00309;gene=paaJ
contig_1	Pyrodigal	CDS	353971	355152	.	+	0	ID=GCA000160335_00309;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000160335_00309;product=putative acetyl-CoA acyltransferase;Dbxref=GO:0003985,GO:0005737;gene=paaJ;Parent=GCA000160335_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_000199080.1,SO:0001217,UniParc:UPI00003B13C7,UniRef:UniRef100_Q6GJW4,UniRef:UniRef50_Q2G124,UniRef:UniRef90_Q2G124;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	355235	355987	.	-	.	ID=GCA000160335_00310_gene;locus_tag=GCA000160335_00310
contig_1	Pyrodigal	CDS	355235	355987	.	-	0	ID=GCA000160335_00310;Name=Cyclase family protein;locus_tag=GCA000160335_00310;product=Cyclase family protein;Parent=GCA000160335_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1878,COG:E,RefSeq:WP_000195908.1,SO:0001217,UniParc:UPI00003B13C8,UniRef:UniRef100_A0A7Z7QXI0,UniRef:UniRef50_Q2G123,UniRef:UniRef90_Q2G123
contig_1	Pyrodigal	gene	356030	358258	.	-	.	ID=GCA000160335_00311_gene;locus_tag=GCA000160335_00311;gene=metE
contig_1	Pyrodigal	CDS	356030	358258	.	-	0	ID=GCA000160335_00311;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000160335_00311;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0009086,GO:0032259;gene=metE;Parent=GCA000160335_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,RefSeq:WP_000207619.1,SO:0001217,UniParc:UPI00000D9C4E,UniRef:UniRef100_Q6GJW2,UniRef:UniRef50_Q8CWX6,UniRef:UniRef90_Q2G122;ec_number=2.1.1.14
contig_1	Pyrodigal	gene	358255	360096	.	-	.	ID=GCA000160335_00312_gene;locus_tag=GCA000160335_00312;gene=metF
contig_1	Pyrodigal	CDS	358255	360096	.	-	0	ID=GCA000160335_00312;Name=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;locus_tag=GCA000160335_00312;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;gene=metF;Parent=GCA000160335_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_000077312.1,SO:0001217,UniParc:UPI0001B7001F,UniRef:UniRef100_A0A7Z7W0N6,UniRef:UniRef50_A0A7U7JSP7,UniRef:UniRef90_A0A7U7JSP7;ec_number=2.1.1.10
contig_1	Pyrodigal	gene	360065	361225	.	-	.	ID=GCA000160335_00313_gene;locus_tag=GCA000160335_00313;gene=metC
contig_1	Pyrodigal	CDS	360065	361225	.	-	0	ID=GCA000160335_00313;Name=cystathionine beta-lyase MetC;locus_tag=GCA000160335_00313;product=cystathionine beta-lyase MetC;Dbxref=GO:0009086,GO:0030170,GO:0047804;gene=metC;Parent=GCA000160335_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000175858.1,SO:0001217,UniParc:UPI00003B13CA,UniRef:UniRef100_A0A7Z7W0S9,UniRef:UniRef50_Q4L332,UniRef:UniRef90_A0A7U7JSH1;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	361222	362325	.	-	.	ID=GCA000160335_00314_gene;locus_tag=GCA000160335_00314;gene=metC
contig_1	Pyrodigal	CDS	361222	362325	.	-	0	ID=GCA000160335_00314;Name=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;locus_tag=GCA000160335_00314;product=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;gene=metC;Parent=GCA000160335_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000655687.1,SO:0001217,UniParc:UPI00003B13CB,UniRef:UniRef100_A0A7Z7W0Z1,UniRef:UniRef50_A0A7U7JSJ6,UniRef:UniRef90_A0A7U7JSJ6
contig_1	Infernal	regulatory_region	362391	362760	5.1e-14	-	.	ID=HBCHLJIIAO_159;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	362989	363834	.	+	.	ID=GCA000160335_00315_gene;locus_tag=GCA000160335_00315;gene=spo0J
contig_1	Pyrodigal	CDS	362989	363834	.	+	0	ID=GCA000160335_00315;Name=Chromosome/plasmid partitioning protein ParB;locus_tag=GCA000160335_00315;product=Chromosome/plasmid partitioning protein ParB;gene=spo0J;Parent=GCA000160335_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_001573568.1,SO:0001217,UniParc:UPI00003B13CC,UniRef:UniRef100_A0A7Z7W0M5,UniRef:UniRef50_A0A390ZJY4,UniRef:UniRef90_A0A390ZJY4
contig_1	Pyrodigal	gene	363988	364869	.	+	.	ID=GCA000160335_00316_gene;locus_tag=GCA000160335_00316;gene=mscS
contig_1	Pyrodigal	CDS	363988	364869	.	+	0	ID=GCA000160335_00316;Name=Mechanosensitive ion channel family protein;locus_tag=GCA000160335_00316;product=Mechanosensitive ion channel family protein;gene=mscS;Parent=GCA000160335_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0668,COG:M,RefSeq:WP_000373076.1,SO:0001217,UniParc:UPI00003B13CD,UniRef:UniRef100_A0A7Z7W1U0,UniRef:UniRef50_Q2G117,UniRef:UniRef90_Q2G117
contig_1	Pyrodigal	gene	364899	365102	.	+	.	ID=GCA000160335_00317_gene;locus_tag=GCA000160335_00317
contig_1	Pyrodigal	CDS	364899	365102	.	+	0	ID=GCA000160335_00317;Name=Cytosolic protein;locus_tag=GCA000160335_00317;product=Cytosolic protein;Parent=GCA000160335_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4481,COG:S,RefSeq:WP_000157348.1,SO:0001217,UniParc:UPI00000CAD14,UniRef:UniRef100_A0A7Z7QWT0,UniRef:UniRef50_Q2G116,UniRef:UniRef90_Q2G116
contig_1	Pyrodigal	gene	365114	366211	.	+	.	ID=GCA000160335_00318_gene;locus_tag=GCA000160335_00318;gene=ychF
contig_1	Pyrodigal	CDS	365114	366211	.	+	0	ID=GCA000160335_00318;Name=redox-regulated ATPase YchF;locus_tag=GCA000160335_00318;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0016887;gene=ychF;Parent=GCA000160335_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_001218732.1,SO:0001217,UniParc:UPI0000054562,UniRef:UniRef100_Q2G115,UniRef:UniRef50_P0ABU2,UniRef:UniRef90_A0A654CN84
contig_1	Pyrodigal	gene	366297	366488	.	-	.	ID=GCA000160335_00319_gene;locus_tag=GCA000160335_00319
contig_1	Pyrodigal	CDS	366297	366488	.	-	0	ID=GCA000160335_00319;Name=hypothetical protein;locus_tag=GCA000160335_00319;product=hypothetical protein;Parent=GCA000160335_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052483.1,SO:0001217,UniParc:UPI0000054561,UniRef:UniRef100_Q2G114,UniRef:UniRef50_Q2G114,UniRef:UniRef90_Q2G114
contig_1	Pyrodigal	gene	366732	367028	.	+	.	ID=GCA000160335_00320_gene;locus_tag=GCA000160335_00320;gene=rpsF
contig_1	Pyrodigal	CDS	366732	367028	.	+	0	ID=GCA000160335_00320;Name=30S ribosomal protein S6;locus_tag=GCA000160335_00320;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0022627,GO:0070181,GO:1990904;gene=rpsF;Parent=GCA000160335_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_001261460.1,SO:0001217,UniParc:UPI0000048022,UniRef:UniRef100_Q2G113,UniRef:UniRef50_P21468,UniRef:UniRef90_Q2G113
contig_1	Pyrodigal	gene	367049	367552	.	+	.	ID=GCA000160335_00321_gene;locus_tag=GCA000160335_00321;gene=ssb
contig_1	Pyrodigal	CDS	367049	367552	.	+	0	ID=GCA000160335_00321;Name=Single-stranded DNA-binding protein 1;locus_tag=GCA000160335_00321;product=Single-stranded DNA-binding protein 1;Dbxref=GO:0003697,GO:0006260,GO:0006281,GO:0006310,GO:0009295;gene=ssb;Parent=GCA000160335_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000934799.1,SO:0001217,UniParc:UPI0000054560,UniRef:UniRef100_Q5HIS8,UniRef:UniRef50_Q5HIS8,UniRef:UniRef90_Q5HIS8
contig_1	Pyrodigal	gene	367604	367846	.	+	.	ID=GCA000160335_00322_gene;locus_tag=GCA000160335_00322;gene=rpsR
contig_1	Pyrodigal	CDS	367604	367846	.	+	0	ID=GCA000160335_00322;Name=30S ribosomal protein S18;locus_tag=GCA000160335_00322;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000160335_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_000897044.1,SO:0001217,UniParc:UPI000004802A,UniRef:UniRef100_Q2G111,UniRef:UniRef50_P21475,UniRef:UniRef90_Q2G111
contig_1	Pyrodigal	gene	368084	369091	.	-	.	ID=GCA000160335_00323_gene;locus_tag=GCA000160335_00323
contig_1	Pyrodigal	CDS	368084	369091	.	-	0	ID=GCA000160335_00323;Name=Abi family protein;locus_tag=GCA000160335_00323;product=Abi family protein;Parent=GCA000160335_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080636.1,SO:0001217,UniParc:UPI00003B13E2,UniRef:UniRef100_A0A7Z7W100,UniRef:UniRef50_A0A2T4PX14,UniRef:UniRef90_A0A7U7JSH7
contig_1	Pyrodigal	gene	369168	369416	.	-	.	ID=GCA000160335_00324_gene;locus_tag=GCA000160335_00324
contig_1	Pyrodigal	CDS	369168	369416	.	-	0	ID=GCA000160335_00324;Name=Integrase;locus_tag=GCA000160335_00324;product=Integrase;Parent=GCA000160335_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD680,UniRef:UniRef100_A0A090N1R2,UniRef:UniRef50_A0A090N1R2,UniRef:UniRef90_A0A090N1R2
contig_1	Pyrodigal	gene	370048	370416	.	+	.	ID=GCA000160335_00325_gene;locus_tag=GCA000160335_00325;gene=yxeA
contig_1	Pyrodigal	CDS	370048	370416	.	+	0	ID=GCA000160335_00325;Name=YxeA family protein;locus_tag=GCA000160335_00325;product=YxeA family protein;gene=yxeA;Parent=GCA000160335_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000849154.1,SO:0001217,UniParc:UPI0001B70023,UniRef:UniRef100_UPI0001B70023,UniRef:UniRef50_Q2G106,UniRef:UniRef90_A0AA40MJ51
contig_1	Pyrodigal	gene	370597	371169	.	+	.	ID=GCA000160335_00326_gene;locus_tag=GCA000160335_00326;gene=ykoI
contig_1	Pyrodigal	CDS	370597	371169	.	+	0	ID=GCA000160335_00326;Name=PepSY domain-containing protein;locus_tag=GCA000160335_00326;product=PepSY domain-containing protein;gene=ykoI;Parent=GCA000160335_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3212,COG:O,RefSeq:WP_000769723.1,SO:0001217,UniParc:UPI00003B13E4,UniRef:UniRef100_A0A7Z7W1V0,UniRef:UniRef50_Q2G105,UniRef:UniRef90_Q2G105
contig_1	Pyrodigal	gene	371307	371570	.	-	.	ID=GCA000160335_00327_gene;locus_tag=GCA000160335_00327
contig_1	Pyrodigal	CDS	371307	371570	.	-	0	ID=GCA000160335_00327;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_00327;product=HTH cro/C1-type domain-containing protein;Parent=GCA000160335_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001055897.1,SO:0001217,UniParc:UPI0000054559,UniRef:UniRef100_Q2G104,UniRef:UniRef50_Q2G104,UniRef:UniRef90_Q2G104
contig_1	Pyrodigal	gene	371864	372118	.	+	.	ID=GCA000160335_00328_gene;locus_tag=GCA000160335_00328;gene=yeaQ
contig_1	Pyrodigal	CDS	371864	372118	.	+	0	ID=GCA000160335_00328;Name=GlsB/YeaQ/YmgE family stress response membrane protein;locus_tag=GCA000160335_00328;product=GlsB/YeaQ/YmgE family stress response membrane protein;gene=yeaQ;Parent=GCA000160335_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2261,COG:R,RefSeq:WP_000466746.1,SO:0001217,UniParc:UPI00003B13E5,UniRef:UniRef100_A0A7Z7QXB6,UniRef:UniRef50_Q2G103,UniRef:UniRef90_Q2G103
contig_1	Infernal	gene	372294	372397	.	-	.	ID=GCA000160335_00329_gene;locus_tag=GCA000160335_00329;gene=sRNA71
contig_1	Infernal	ncRNA	372294	372397	5.5e-16	-	.	ID=GCA000160335_00329;Name=Staphylococcus sRNA71 small RNA;locus_tag=GCA000160335_00329;product=Staphylococcus sRNA71 small RNA;Dbxref=RFAM:RF03534;Parent=GCA000160335_00329_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF03534
contig_1	Pyrodigal	gene	372544	373125	.	+	.	ID=GCA000160335_00330_gene;locus_tag=GCA000160335_00330;gene=phoE
contig_1	Pyrodigal	CDS	372544	373125	.	+	0	ID=GCA000160335_00330;Name=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);locus_tag=GCA000160335_00330;product=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);gene=phoE;Parent=GCA000160335_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_000158375.1,SO:0001217,UniParc:UPI00000D9C57,UniRef:UniRef100_A0A0H3JKT0,UniRef:UniRef50_A0A380CV51,UniRef:UniRef90_Q2G101
contig_1	Pyrodigal	gene	373191	373577	.	-	.	ID=GCA000160335_00331_gene;locus_tag=GCA000160335_00331
contig_1	Pyrodigal	CDS	373191	373577	.	-	0	ID=GCA000160335_00331;Name=Membrane spanning protein;locus_tag=GCA000160335_00331;product=Membrane spanning protein;Parent=GCA000160335_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD67D,UniRef:UniRef100_A0A7Z7QWU7,UniRef:UniRef50_A0A2K4AJS7,UniRef:UniRef90_Q2G100
contig_1	Pyrodigal	gene	373845	374471	.	-	.	ID=GCA000160335_00332_gene;locus_tag=GCA000160335_00332
contig_1	Pyrodigal	CDS	373845	374471	.	-	0	ID=GCA000160335_00332;Name=NDxxF motif lipoprotein;locus_tag=GCA000160335_00332;product=NDxxF motif lipoprotein;Parent=GCA000160335_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000746688.1,SO:0001217,UniParc:UPI00003B13E9,UniRef:UniRef100_A0A7Z7QWQ0,UniRef:UniRef50_Q4L374,UniRef:UniRef90_Q2G0Z9
contig_1	Pyrodigal	gene	374544	376163	.	-	.	ID=GCA000160335_00333_gene;locus_tag=GCA000160335_00333
contig_1	Pyrodigal	CDS	374544	376163	.	-	0	ID=GCA000160335_00333;Name=Rho termination factor N-terminal domain-containing protein;locus_tag=GCA000160335_00333;product=Rho termination factor N-terminal domain-containing protein;Parent=GCA000160335_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000887770.1,SO:0001217,UniParc:UPI00003B13EA,UniRef:UniRef100_A0A7Z7QWY7,UniRef:UniRef50_A0A0H3JUH4,UniRef:UniRef90_A0A0H3JUH4
contig_1	Pyrodigal	gene	376278	377801	.	-	.	ID=GCA000160335_00334_gene;locus_tag=GCA000160335_00334;gene=ahpF
contig_1	Pyrodigal	CDS	376278	377801	.	-	0	ID=GCA000160335_00334;Name=alkyl hydroperoxide reductase subunit F;locus_tag=GCA000160335_00334;product=alkyl hydroperoxide reductase subunit F;Dbxref=GO:0000302,GO:0008785,GO:0016668,GO:0050660,GO:0051287,GO:0102039;gene=ahpF;Parent=GCA000160335_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3634,COG:V,RefSeq:WP_000930504.1,SO:0001217,UniParc:UPI0001B701BC,UniRef:UniRef100_UPI0001B701BC,UniRef:UniRef50_O05204,UniRef:UniRef90_O05204;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	377817	378386	.	-	.	ID=GCA000160335_00335_gene;locus_tag=GCA000160335_00335;gene=ahpC
contig_1	Pyrodigal	CDS	377817	378386	.	-	0	ID=GCA000160335_00335;Name=alkyl hydroperoxide reductase subunit C;locus_tag=GCA000160335_00335;product=alkyl hydroperoxide reductase subunit C;Dbxref=GO:0005829,GO:0006979,GO:0008379,GO:0033554,GO:0042744,GO:0045454,GO:0102039;gene=ahpC;Parent=GCA000160335_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0450,COG:V,KEGG:K24119,RefSeq:WP_000052781.1,SO:0001217,UniParc:UPI0000054552,UniRef:UniRef100_P0A0B7,UniRef:UniRef50_K0J4Q8,UniRef:UniRef90_P0A0B7;ec_number=1.11.1.26
contig_1	Pyrodigal	gene	378877	379632	.	+	.	ID=GCA000160335_00336_gene;locus_tag=GCA000160335_00336;gene=nfsA
contig_1	Pyrodigal	CDS	378877	379632	.	+	0	ID=GCA000160335_00336;Name=oxygen-insensitive NADPH nitroreductase;locus_tag=GCA000160335_00336;product=oxygen-insensitive NADPH nitroreductase;Dbxref=GO:0016491;gene=nfsA;Parent=GCA000160335_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_001279733.1,SO:0001217,UniParc:UPI00003B13EC,UniRef:UniRef100_Q6GJR6,UniRef:UniRef50_Q2G0Z5,UniRef:UniRef90_Q2G0Z5;ec_number=1.6.-.-
contig_1	Pyrodigal	gene	379712	381100	.	-	.	ID=GCA000160335_00337_gene;locus_tag=GCA000160335_00337;gene=tcyP
contig_1	Pyrodigal	CDS	379712	381100	.	-	0	ID=GCA000160335_00337;Name=L-cystine uptake protein TcyP;locus_tag=GCA000160335_00337;product=L-cystine uptake protein TcyP;gene=tcyP;Parent=GCA000160335_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1823,COG:E,RefSeq:WP_000991010.1,SO:0001217,UniParc:UPI00003B13ED,UniRef:UniRef100_A0A7Z7QXC3,UniRef:UniRef50_P54596,UniRef:UniRef90_A0A7U7JSI4
contig_1	Pyrodigal	gene	382219	383175	.	-	.	ID=GCA000160335_00338_gene;locus_tag=GCA000160335_00338
contig_1	Pyrodigal	CDS	382219	383175	.	-	0	ID=GCA000160335_00338;Name=putative protein SAV0385;locus_tag=GCA000160335_00338;product=putative protein SAV0385;Parent=GCA000160335_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956150.1,SO:0001217,UniParc:UPI00019F4DB2,UniRef:UniRef100_A0A7Z7W0Q0,UniRef:UniRef50_P60855,UniRef:UniRef90_P60855
contig_1	Pyrodigal	gene	383293	383955	.	-	.	ID=GCA000160335_00339_gene;locus_tag=GCA000160335_00339
contig_1	Pyrodigal	CDS	383293	383955	.	-	0	ID=GCA000160335_00339;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00339;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000394700.1,SO:0001217,UniParc:UPI00003B13F1,UniRef:UniRef100_A0A7Z7W0U1,UniRef:UniRef50_K9B354,UniRef:UniRef90_Q2G0Z1
contig_1	Pyrodigal	gene	384098	384538	.	-	.	ID=GCA000160335_00340_gene;locus_tag=GCA000160335_00340
contig_1	Pyrodigal	CDS	384098	384538	.	-	0	ID=GCA000160335_00340;Name=UPF0355 protein MRSA252;locus_tag=GCA000160335_00340;product=UPF0355 protein MRSA252;Parent=GCA000160335_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD645,UniRef:UniRef100_Q6GJR0,UniRef:UniRef50_Q4L382,UniRef:UniRef90_Q6GJR0
contig_1	Infernal	regulatory_region	384685	384787	7.8e-11	+	.	ID=HBCHLJIIAO_167;Name=Purine riboswitch aptamer;product=Purine riboswitch aptamer;Dbxref=RFAM:RF00167;inference=profile:Rfam:RF00167;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	385018	385596	.	+	.	ID=GCA000160335_00341_gene;locus_tag=GCA000160335_00341;gene=xpt
contig_1	Pyrodigal	CDS	385018	385596	.	+	0	ID=GCA000160335_00341;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000160335_00341;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000310,GO:0005737,GO:0006166,GO:0032265,GO:0043101,GO:0046110;gene=xpt;Parent=GCA000160335_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K03816,RefSeq:WP_000421416.1,SO:0001217,UniParc:UPI00003B13F3,UniRef:UniRef100_Q6GJQ9,UniRef:UniRef50_Q2G0Y9,UniRef:UniRef90_Q2G0Y9;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	385596	386864	.	+	.	ID=GCA000160335_00342_gene;locus_tag=GCA000160335_00342;gene=uraA
contig_1	Pyrodigal	CDS	385596	386864	.	+	0	ID=GCA000160335_00342;Name=Xanthine permease;locus_tag=GCA000160335_00342;product=Xanthine permease;gene=uraA;Parent=GCA000160335_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_000793023.1,SO:0001217,UniParc:UPI00000D9C61,UniRef:UniRef100_A0A7Z7W1V5,UniRef:UniRef50_P42086,UniRef:UniRef90_A0A1J6I5H8
contig_1	Pyrodigal	gene	386902	388368	.	+	.	ID=GCA000160335_00343_gene;locus_tag=GCA000160335_00343;gene=guaB
contig_1	Pyrodigal	CDS	386902	388368	.	+	0	ID=GCA000160335_00343;Name=IMP dehydrogenase;locus_tag=GCA000160335_00343;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872;gene=guaB;Parent=GCA000160335_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3448,COG:T,KEGG:K00088,RefSeq:WP_000264071.1,SO:0001217,UniParc:UPI0000054548,UniRef:UniRef100_Q2G0Y7,UniRef:UniRef50_Q2G0Y7,UniRef:UniRef90_Q2G0Y7;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	388393	389934	.	+	.	ID=GCA000160335_00344_gene;locus_tag=GCA000160335_00344;gene=guaA
contig_1	Pyrodigal	CDS	388393	389934	.	+	0	ID=GCA000160335_00344;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000160335_00344;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA000160335_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,KEGG:K01951,RefSeq:WP_000424963.1,SO:0001217,UniParc:UPI000012BD6F,UniRef:UniRef100_P64296,UniRef:UniRef50_Q2G0Y6,UniRef:UniRef90_Q2G0Y6;ec_number=6.3.5.2
contig_1	Infernal	gene	389956	390193	.	-	.	ID=GCA000160335_00345_gene;locus_tag=GCA000160335_00345;gene=S35
contig_1	Infernal	ncRNA	389956	390193	4.7e-18	-	.	ID=GCA000160335_00345;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00345;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00345_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Infernal	gene	390096	390333	.	+	.	ID=GCA000160335_00346_gene;locus_tag=GCA000160335_00346;gene=tsr24
contig_1	Infernal	ncRNA	390096	390333	7.3e-36	+	.	ID=GCA000160335_00346;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_00346;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_00346_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	390465	391001	.	-	.	ID=GCA000160335_00347_gene;locus_tag=GCA000160335_00347
contig_1	Pyrodigal	CDS	390465	391001	.	-	0	ID=GCA000160335_00347;Name=Phage protein;locus_tag=GCA000160335_00347;product=Phage protein;Parent=GCA000160335_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000551644.1,SO:0001217,UniParc:UPI00003B13F5,UniRef:UniRef100_A0A7Z7QWQ4,UniRef:UniRef50_Q2G0Y5,UniRef:UniRef90_Q2G0Y5
contig_1	Infernal	gene	391264	391361	.	-	.	ID=GCA000160335_00348_gene;locus_tag=GCA000160335_00348;gene=sau-63
contig_1	Infernal	ncRNA	391264	391361	1.2e-23	-	.	ID=GCA000160335_00348;Name=Staphylococcus sRNA sau-63;locus_tag=GCA000160335_00348;product=Staphylococcus sRNA sau-63;Dbxref=RFAM:RF02394;Parent=GCA000160335_00348_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02394
contig_1	Pyrodigal	gene	391688	392098	.	-	.	ID=GCA000160335_00349_gene;locus_tag=GCA000160335_00349;gene=mazF
contig_1	Pyrodigal	CDS	391688	392098	.	-	0	ID=GCA000160335_00349;Name=Endoribonuclease MazF;locus_tag=GCA000160335_00349;product=Endoribonuclease MazF;gene=mazF;Parent=GCA000160335_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4DB0,UniRef:UniRef100_A0A166JT85,UniRef:UniRef50_A0A166JT85,UniRef:UniRef90_A0A166JT85
contig_1	Pyrodigal	gene	393827	393979	.	-	.	ID=GCA000160335_00350_gene;locus_tag=GCA000160335_00350;pseudogene=unitary
contig_1	Pyrodigal	CDS	393827	393979	.	-	0	ID=GCA000160335_00350;Name=hypothetical protein;locus_tag=GCA000160335_00350;product=hypothetical protein;pseudogene=unitary;Parent=GCA000160335_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248838.1,SO:0001217,UniParc:UPI00019CD642,UniRef:UniRef100_A0A7U7ICC2,UniRef:UniRef50_A0A6B1RMS0,UniRef:UniRef90_A0A7U7ICC2
contig_1	Infernal	regulatory_region	394196	394255	2.6e-17	+	.	ID=HBCHLJIIAO_152;Name=Staphylococcus aureus small RNA TEG147;product=Staphylococcus aureus small RNA TEG147;Dbxref=RFAM:RF03535;inference=profile:Rfam:RF03535;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	394501	394860	.	-	.	ID=GCA000160335_00351_gene;locus_tag=GCA000160335_00351
contig_1	Pyrodigal	CDS	394501	394860	.	-	0	ID=GCA000160335_00351;Name=DUF1304 domain-containing protein;locus_tag=GCA000160335_00351;product=DUF1304 domain-containing protein;Parent=GCA000160335_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3759,COG:S,KEGG:K08987,RefSeq:WP_001021628.1,SO:0001217,UniParc:UPI00003B13FA,UniRef:UniRef100_A0A7Z7QWZ2,UniRef:UniRef50_Q2G0Y1,UniRef:UniRef90_Q2G0Y1
contig_1	Pyrodigal	gene	394879	395724	.	-	.	ID=GCA000160335_00352_gene;locus_tag=GCA000160335_00352;gene=ybjT
contig_1	Pyrodigal	CDS	394879	395724	.	-	0	ID=GCA000160335_00352;Name=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000160335_00352;product=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ybjT;Parent=GCA000160335_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024392.1,SO:0001217,UniParc:UPI00003B13FB,UniRef:UniRef100_A0A0E1X9M0,UniRef:UniRef50_A0A0D0RS60,UniRef:UniRef90_A0A391A2R3
contig_1	Pyrodigal	gene	396196	396876	.	+	.	ID=GCA000160335_00353_gene;locus_tag=GCA000160335_00353;gene=set16
contig_1	Pyrodigal	CDS	396196	396876	.	+	0	ID=GCA000160335_00353;Name=superantigen-like protein SSL1;locus_tag=GCA000160335_00353;product=superantigen-like protein SSL1;gene=set16;Parent=GCA000160335_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11042,RefSeq:WP_000668994.1,SO:0001217,UniParc:UPI00003B13FC,UniRef:UniRef100_A0A7Z7QWS3,UniRef:UniRef50_Q2G0X9,UniRef:UniRef90_A0AAE2ZW11,VFDB:VFC0235,VFDB:VFG004931
contig_1	Pyrodigal	gene	397159	397860	.	+	.	ID=GCA000160335_00354_gene;locus_tag=GCA000160335_00354
contig_1	Pyrodigal	CDS	397159	397860	.	+	0	ID=GCA000160335_00354;Name=superantigen-like protein SSL2;locus_tag=GCA000160335_00354;product=superantigen-like protein SSL2;Parent=GCA000160335_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000782834.1,SO:0001217,UniParc:UPI00003B13FD,UniRef:UniRef100_A0A7Z7QXM7,UniRef:UniRef50_Q2G0X8,UniRef:UniRef90_A0A5S9C5C2
contig_1	Pyrodigal	gene	398148	399179	.	+	.	ID=GCA000160335_00355_gene;locus_tag=GCA000160335_00355
contig_1	Pyrodigal	CDS	398148	399179	.	+	0	ID=GCA000160335_00355;Name=superantigen-like protein SSL3;locus_tag=GCA000160335_00355;product=superantigen-like protein SSL3;Parent=GCA000160335_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000702714.1,SO:0001217,UniParc:UPI00003B13FE,UniRef:UniRef100_A0A7Z7QXD5,UniRef:UniRef50_Q2G0X7,UniRef:UniRef90_A0A5S9C5E6
contig_1	Pyrodigal	gene	399526	400440	.	+	.	ID=GCA000160335_00356_gene;locus_tag=GCA000160335_00356
contig_1	Pyrodigal	CDS	399526	400440	.	+	0	ID=GCA000160335_00356;Name=superantigen-like protein SSL3;locus_tag=GCA000160335_00356;product=superantigen-like protein SSL3;Parent=GCA000160335_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784524.1,SO:0001217,UniParc:UPI0001B7004D,UniRef:UniRef100_UPI0001B7004D,UniRef:UniRef50_Q2G0X7,UniRef:UniRef90_A0A5S9C3J9
contig_1	Pyrodigal	gene	400801	401505	.	+	.	ID=GCA000160335_00357_gene;locus_tag=GCA000160335_00357
contig_1	Pyrodigal	CDS	400801	401505	.	+	0	ID=GCA000160335_00357;Name=superantigen-like protein SSL5;locus_tag=GCA000160335_00357;product=superantigen-like protein SSL5;Parent=GCA000160335_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23587,RefSeq:WP_000784258.1,SO:0001217,UniParc:UPI00000BA6DB,UniRef:UniRef100_Q9ZFS6,UniRef:UniRef50_Q2G1S6,UniRef:UniRef90_Q9ZFS6
contig_1	Pyrodigal	gene	401952	402647	.	+	.	ID=GCA000160335_00358_gene;locus_tag=GCA000160335_00358
contig_1	Pyrodigal	CDS	401952	402647	.	+	0	ID=GCA000160335_00358;Name=superantigen-like protein SSL7;locus_tag=GCA000160335_00358;product=superantigen-like protein SSL7;Parent=GCA000160335_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769829.1,SO:0001217,UniParc:UPI00000AF124,UniRef:UniRef100_A0A7Z7W0P6,UniRef:UniRef50_Q2G2Y0,UniRef:UniRef90_A0A7Z7W0P6
contig_1	Pyrodigal	gene	402988	403686	.	+	.	ID=GCA000160335_00359_gene;locus_tag=GCA000160335_00359
contig_1	Pyrodigal	CDS	402988	403686	.	+	0	ID=GCA000160335_00359;Name=superantigen-like protein SSL9;locus_tag=GCA000160335_00359;product=superantigen-like protein SSL9;Parent=GCA000160335_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778481.1,SO:0001217,UniParc:UPI00000B00C3,UniRef:UniRef100_A0A7Z7W1V8,UniRef:UniRef50_Q2G2X9,UniRef:UniRef90_A0A229LTQ3
contig_1	Pyrodigal	gene	404049	404732	.	+	.	ID=GCA000160335_00360_gene;locus_tag=GCA000160335_00360
contig_1	Pyrodigal	CDS	404049	404732	.	+	0	ID=GCA000160335_00360;Name=superantigen-like protein SSL10;locus_tag=GCA000160335_00360;product=superantigen-like protein SSL10;Parent=GCA000160335_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778504.1,SO:0001217,UniParc:UPI00000B8C55,UniRef:UniRef100_A0A7Z7QWX2,UniRef:UniRef50_Q2G2X7,UniRef:UniRef90_A0A7Z7QWX2
contig_1	Pyrodigal	gene	404994	406550	.	+	.	ID=GCA000160335_00361_gene;locus_tag=GCA000160335_00361;gene=hsdM
contig_1	Pyrodigal	CDS	404994	406550	.	+	0	ID=GCA000160335_00361;Name=type I restriction-modification system subunit M;locus_tag=GCA000160335_00361;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;gene=hsdM;Parent=GCA000160335_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,KEGG:K03427,RefSeq:WP_000028598.1,SO:0001217,UniParc:UPI00003B1402,UniRef:UniRef100_A0A7Z7QXD7,UniRef:UniRef50_B1BVR9,UniRef:UniRef90_A0A0H3JSX7;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	406543	407775	.	+	.	ID=GCA000160335_00362_gene;locus_tag=GCA000160335_00362
contig_1	Pyrodigal	CDS	406543	407775	.	+	0	ID=GCA000160335_00362;Name=Type I restriction modification DNA specificity domain-containing protein;locus_tag=GCA000160335_00362;product=Type I restriction modification DNA specificity domain-containing protein;Parent=GCA000160335_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000072630.1,SO:0001217,UniParc:UPI0001B7004F,UniRef:UniRef100_UPI0001B7004F,UniRef:UniRef50_B0FFT9,UniRef:UniRef90_A0A7Z7QWQ8;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	408158	408856	.	+	.	ID=GCA000160335_00363_gene;locus_tag=GCA000160335_00363
contig_1	Pyrodigal	CDS	408158	408856	.	+	0	ID=GCA000160335_00363;Name=superantigen-like protein SSL11;locus_tag=GCA000160335_00363;product=superantigen-like protein SSL11;Parent=GCA000160335_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769147.1,SO:0001217,UniParc:UPI00003B1404,UniRef:UniRef100_A0A7Z7QWX0,UniRef:UniRef50_A8E1U5,UniRef:UniRef90_A0A5S9ETA0
contig_1	Pyrodigal	gene	408875	410362	.	+	.	ID=GCA000160335_00364_gene;locus_tag=GCA000160335_00364
contig_1	Pyrodigal	CDS	408875	410362	.	+	0	ID=GCA000160335_00364;Name=FKLRK protein;locus_tag=GCA000160335_00364;product=FKLRK protein;Parent=GCA000160335_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001208887,BlastRules:WP_001208912,BlastRules:WP_001208927,RefSeq:WP_001208900.1,SO:0001217,UniParc:UPI00003B1405,UniRef:UniRef100_A0AAJ4YY62,UniRef:UniRef50_A0A418JJR9,UniRef:UniRef90_A0AAJ4YY62
contig_1	Pyrodigal	gene	410468	410776	.	-	.	ID=GCA000160335_00365_gene;locus_tag=GCA000160335_00365;gene=spn
contig_1	Pyrodigal	CDS	410468	410776	.	-	0	ID=GCA000160335_00365;Name=myeloperoxidase inhibitor SPIN;locus_tag=GCA000160335_00365;product=myeloperoxidase inhibitor SPIN;gene=spn;Parent=GCA000160335_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001667246,RefSeq:WP_000669514.1,SO:0001217,UniParc:UPI00003B1406,UniRef:UniRef100_A0A7Z7QXE8,UniRef:UniRef50_A0A2A4GXB5,UniRef:UniRef90_Q2G0X2
contig_1	Pyrodigal	gene	411113	411937	.	+	.	ID=GCA000160335_00366_gene;locus_tag=GCA000160335_00366
contig_1	Pyrodigal	CDS	411113	411937	.	+	0	ID=GCA000160335_00366;Name=putative lipoprotein SAR0445;locus_tag=GCA000160335_00366;product=putative lipoprotein SAR0445;Dbxref=GO:0005886;Parent=GCA000160335_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q7A7G3,UniRef:UniRef90_Q6GJM8
contig_1	Pyrodigal	gene	411930	412043	.	+	.	ID=GCA000160335_00367_gene;locus_tag=GCA000160335_00367
contig_1	Pyrodigal	CDS	411930	412043	.	+	0	ID=GCA000160335_00367;Name=hypothetical protein;locus_tag=GCA000160335_00367;product=hypothetical protein;Parent=GCA000160335_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00021ADBAE,UniRef:UniRef100_A0A7Z7QXE6,UniRef:UniRef50_A0A7Z7QXE6,UniRef:UniRef90_A0A7Z7QXE6
contig_1	Pyrodigal	gene	412004	413257	.	+	.	ID=GCA000160335_00368_gene;locus_tag=GCA000160335_00368
contig_1	Pyrodigal	CDS	412004	413257	.	+	0	ID=GCA000160335_00368;Name=Cytosolic protein;locus_tag=GCA000160335_00368;product=Cytosolic protein;Parent=GCA000160335_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD608,UniRef:UniRef100_A0A7Z7QWR9,UniRef:UniRef50_A0A6A9GY48,UniRef:UniRef90_Q2G0W8
contig_1	Pyrodigal	gene	413254	413577	.	+	.	ID=GCA000160335_00369_gene;locus_tag=GCA000160335_00369
contig_1	Pyrodigal	CDS	413254	413577	.	+	0	ID=GCA000160335_00369;Name=Cytosolic protein;locus_tag=GCA000160335_00369;product=Cytosolic protein;Parent=GCA000160335_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000971498.1,SO:0001217,UniParc:UPI0000054529,UniRef:UniRef100_Q2G0W7,UniRef:UniRef50_Q2G0W7,UniRef:UniRef90_Q2G0W7
contig_1	Pyrodigal	gene	413596	413910	.	+	.	ID=GCA000160335_00370_gene;locus_tag=GCA000160335_00370
contig_1	Pyrodigal	CDS	413596	413910	.	+	0	ID=GCA000160335_00370;Name=hypothetical protein;locus_tag=GCA000160335_00370;product=hypothetical protein;Parent=GCA000160335_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000172546.1,SO:0001217,UniParc:UPI00003B140D,UniRef:UniRef100_A0A7Z7QWS8,UniRef:UniRef50_Q2G0W6,UniRef:UniRef90_Q2G0W6
contig_1	Pyrodigal	gene	414199	414393	.	-	.	ID=GCA000160335_00371_gene;locus_tag=GCA000160335_00371
contig_1	Pyrodigal	CDS	414199	414393	.	-	0	ID=GCA000160335_00371;Name=hypothetical protein;locus_tag=GCA000160335_00371;product=hypothetical protein;Parent=GCA000160335_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B140E,UniRef:UniRef100_A0A5F0HJ68,UniRef:UniRef50_Q2G0W5,UniRef:UniRef90_A0A0H3JVN5
contig_1	Pyrodigal	gene	414578	415780	.	+	.	ID=GCA000160335_00372_gene;locus_tag=GCA000160335_00372;gene=yejR
contig_1	Pyrodigal	CDS	414578	415780	.	+	0	ID=GCA000160335_00372;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000160335_00372;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000160335_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_001062991.1,SO:0001217,UniParc:UPI00003B140F,UniRef:UniRef100_A0A7Z7QXF7,UniRef:UniRef50_P94400,UniRef:UniRef90_Q2G0W4
contig_1	Pyrodigal	gene	416049	416177	.	+	.	ID=GCA000160335_00373_gene;locus_tag=GCA000160335_00373
contig_1	Pyrodigal	CDS	416049	416177	.	+	0	ID=GCA000160335_00373;Name=hypothetical protein;locus_tag=GCA000160335_00373;product=hypothetical protein;Parent=GCA000160335_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001287492.1,SO:0001217,UniParc:UPI00003B1410,UniRef:UniRef100_A0A7Z7QWT8,UniRef:UniRef50_Q2G0W3,UniRef:UniRef90_A0A7Z7QWT8
contig_1	Infernal	gene	416374	416529	.	-	.	ID=GCA000160335_00374_gene;locus_tag=GCA000160335_00374;gene=sau-41
contig_1	Infernal	ncRNA	416374	416529	7.8e-31	-	.	ID=GCA000160335_00374;Name=Staphylococcus sRNA sau-41;locus_tag=GCA000160335_00374;product=Staphylococcus sRNA sau-41;Dbxref=RFAM:RF02390;Parent=GCA000160335_00374_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02390
contig_1	Bakta	gene	416439	416501	.	-	.	ID=GCA000160335_00375_gene;locus_tag=GCA000160335_00375;inference=ab initio prediction:Bakta;gene=psmA4
contig_1	Bakta	CDS	416439	416501	.	-	0	ID=GCA000160335_00375;Name=Phenol-soluble modulin alpha 4 peptide;locus_tag=GCA000160335_00375;product=Phenol-soluble modulin alpha 4 peptide;Dbxref=GO:0031640;gene=psmA4;Parent=GCA000160335_00375_gene;Note=RefSeq:WP_014532416.1,SO:0001217,UniParc:UPI000161A44A,UniRef:UniRef100_P0C818,UniRef:UniRef50_P0C818,UniRef:UniRef90_P0C818
contig_1	Bakta	gene	416565	416633	.	-	.	ID=GCA000160335_00376_gene;locus_tag=GCA000160335_00376;inference=ab initio prediction:Bakta;gene=psmA3
contig_1	Bakta	CDS	416565	416633	.	-	0	ID=GCA000160335_00376;Name=Phenol-soluble modulin alpha 3 peptide;locus_tag=GCA000160335_00376;product=Phenol-soluble modulin alpha 3 peptide;Dbxref=GO:0031640;gene=psmA3;Parent=GCA000160335_00376_gene;Note=RefSeq:WP_099119694.1,SO:0001217,UniParc:UPI000178DEF1,UniRef:UniRef100_P0C812,UniRef:UniRef50_P0C805,UniRef:UniRef90_P0C805
contig_1	Bakta	gene	416685	416750	.	-	.	ID=GCA000160335_00377_gene;locus_tag=GCA000160335_00377;inference=ab initio prediction:Bakta;gene=psmA2
contig_1	Bakta	CDS	416685	416750	.	-	0	ID=GCA000160335_00377;Name=Phenol-soluble modulin alpha 2 peptide;locus_tag=GCA000160335_00377;product=Phenol-soluble modulin alpha 2 peptide;Dbxref=GO:0031640;gene=psmA2;Parent=GCA000160335_00377_gene;Note=RefSeq:WP_014373780.1,SO:0001217,UniParc:UPI00015FD703,UniRef:UniRef100_P0C7Z3,UniRef:UniRef50_P0C7Z3,UniRef:UniRef90_P0C7Z3
contig_1	Bakta	gene	416782	416847	.	-	.	ID=GCA000160335_00378_gene;locus_tag=GCA000160335_00378;inference=ab initio prediction:Bakta;gene=psmA1
contig_1	Bakta	CDS	416782	416847	.	-	0	ID=GCA000160335_00378;Name=Phenol-soluble modulin alpha 1 peptide;locus_tag=GCA000160335_00378;product=Phenol-soluble modulin alpha 1 peptide;Dbxref=GO:0031640;gene=psmA1;Parent=GCA000160335_00378_gene;Note=RefSeq:WP_014373781.1,SO:0001217,UniParc:UPI00015FD704,UniRef:UniRef100_P0C7Y1,UniRef:UniRef50_P0C7Y1,UniRef:UniRef90_P0C7Y1
contig_1	Pyrodigal	gene	417366	418850	.	+	.	ID=GCA000160335_00379_gene;locus_tag=GCA000160335_00379;gene=nuoL
contig_1	Pyrodigal	CDS	417366	418850	.	+	0	ID=GCA000160335_00379;Name=NADH dehydrogenase subunit 5;locus_tag=GCA000160335_00379;product=NADH dehydrogenase subunit 5;gene=nuoL;Parent=GCA000160335_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1009,RefSeq:WP_000948285.1,SO:0001217,UniParc:UPI00003B1411,UniRef:UniRef100_A0A2X2JY01,UniRef:UniRef50_Q2G0W2,UniRef:UniRef90_Q2G0W2;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	418863	421568	.	+	.	ID=GCA000160335_00380_gene;locus_tag=GCA000160335_00380;gene=dabA
contig_1	Pyrodigal	CDS	418863	421568	.	+	0	ID=GCA000160335_00380;Name=putative inorganic carbon transporter subunit DabA;locus_tag=GCA000160335_00380;product=putative inorganic carbon transporter subunit DabA;Dbxref=GO:0005886,GO:0008270;gene=dabA;Parent=GCA000160335_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3002,KEGG:K09822,RefSeq:WP_000211554.1,SO:0001217,UniParc:UPI0001B7034D,UniRef:UniRef100_A0A7Z7QXF4,UniRef:UniRef50_Q2G0W1,UniRef:UniRef90_Q2G0W1
contig_1	Pyrodigal	gene	421730	422092	.	+	.	ID=GCA000160335_00381_gene;locus_tag=GCA000160335_00381;gene=mpsC
contig_1	Pyrodigal	CDS	421730	422092	.	+	0	ID=GCA000160335_00381;Name=Na+-translocating membrane putative-generating system MpsC domain-containing protein;locus_tag=GCA000160335_00381;product=Na+-translocating membrane putative-generating system MpsC domain-containing protein;gene=mpsC;Parent=GCA000160335_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5609,RefSeq:WP_000831495.1,SO:0001217,UniParc:UPI000005451F,UniRef:UniRef100_Q2G0W0,UniRef:UniRef50_A0A7U7PXA8,UniRef:UniRef90_A0A7U7PXA8
contig_1	Pyrodigal	gene	422775	423449	.	+	.	ID=GCA000160335_00382_gene;locus_tag=GCA000160335_00382;gene=pgpB
contig_1	Pyrodigal	CDS	422775	423449	.	+	0	ID=GCA000160335_00382;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000160335_00382;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000160335_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000565823.1,SO:0001217,UniParc:UPI00003B1414,UniRef:UniRef100_A0A0E1XBR6,UniRef:UniRef50_Q2G0V8,UniRef:UniRef90_Q2G0V8
contig_1	Pyrodigal	gene	423486	424220	.	+	.	ID=GCA000160335_00383_gene;locus_tag=GCA000160335_00383;gene=yvaK
contig_1	Pyrodigal	CDS	423486	424220	.	+	0	ID=GCA000160335_00383;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000160335_00383;product=Serine aminopeptidase S33 domain-containing protein;gene=yvaK;Parent=GCA000160335_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001220806.1,SO:0001217,UniParc:UPI00003B1415,UniRef:UniRef100_A0A7Z7W119,UniRef:UniRef50_Q2G0V7,UniRef:UniRef90_Q2G0V7
contig_1	Pyrodigal	gene	424677	426014	.	+	.	ID=GCA000160335_00384_gene;locus_tag=GCA000160335_00384;gene=yocR
contig_1	Pyrodigal	CDS	424677	426014	.	+	0	ID=GCA000160335_00384;Name=Transporter;locus_tag=GCA000160335_00384;product=Transporter;gene=yocR;Parent=GCA000160335_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_000828722.1,SO:0001217,UniParc:UPI0001AE9B20,UniRef:UniRef100_A0A0H3JV22,UniRef:UniRef50_A0A654CN93,UniRef:UniRef90_Q2G0V5
contig_1	Pyrodigal	gene	426231	427136	.	+	.	ID=GCA000160335_00385_gene;locus_tag=GCA000160335_00385;gene=cysK
contig_1	Pyrodigal	CDS	426231	427136	.	+	0	ID=GCA000160335_00385;Name=Tryptophan synthase beta chain-like PALP domain-containing protein;locus_tag=GCA000160335_00385;product=Tryptophan synthase beta chain-like PALP domain-containing protein;gene=cysK;Parent=GCA000160335_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000634114.1,SO:0001217,UniParc:UPI0003188C7F,UniRef:UniRef100_UPI0003188C7F,UniRef:UniRef50_Q2G0V4,UniRef:UniRef90_Q2G0V4
contig_1	Pyrodigal	gene	427129	428271	.	+	.	ID=GCA000160335_00386_gene;locus_tag=GCA000160335_00386;gene=metC
contig_1	Pyrodigal	CDS	427129	428271	.	+	0	ID=GCA000160335_00386;Name=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;locus_tag=GCA000160335_00386;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;Dbxref=GO:0019346,GO:0030170;gene=metC;Parent=GCA000160335_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,KEGG:K17217,RefSeq:WP_001036658.1,SO:0001217,UniParc:UPI00003B1418,UniRef:UniRef100_A0A0E1XJR9,UniRef:UniRef50_Q1M0P5,UniRef:UniRef90_A0A2Y2FJW5;ec_number=4.4.1.2
contig_1	Pyrodigal	gene	428563	429588	.	+	.	ID=GCA000160335_00387_gene;locus_tag=GCA000160335_00387;gene=metN1
contig_1	Pyrodigal	CDS	428563	429588	.	+	0	ID=GCA000160335_00387;Name=Methionine import ATP-binding protein MetN 1;locus_tag=GCA000160335_00387;product=Methionine import ATP-binding protein MetN 1;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN1;Parent=GCA000160335_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000569267.1,SO:0001217,UniParc:UPI00003B1419,UniRef:UniRef100_Q6GJL2,UniRef:UniRef50_Q2G0V2,UniRef:UniRef90_Q2G0V2;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	429592	430251	.	+	.	ID=GCA000160335_00388_gene;locus_tag=GCA000160335_00388;gene=metP
contig_1	Pyrodigal	CDS	429592	430251	.	+	0	ID=GCA000160335_00388;Name=Methionine ABC transporter%2C permease component;locus_tag=GCA000160335_00388;product=Methionine ABC transporter%2C permease component;gene=metP;Parent=GCA000160335_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000467992.1,SO:0001217,UniParc:UPI00003B141A,UniRef:UniRef100_A0A7Z7QWS9,UniRef:UniRef50_S2XCZ2,UniRef:UniRef90_A0A7U7JSM8
contig_1	Pyrodigal	gene	430288	431130	.	+	.	ID=GCA000160335_00389_gene;locus_tag=GCA000160335_00389;gene=gmpC
contig_1	Pyrodigal	CDS	430288	431130	.	+	0	ID=GCA000160335_00389;Name=dipeptide ABC transporter glycylmethionine-binding lipoprotein;locus_tag=GCA000160335_00389;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;gene=gmpC;Parent=GCA000160335_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825530,KEGG:K02073,RefSeq:WP_000825534.1,SO:0001217,UniParc:UPI0001B70053,UniRef:UniRef100_A0A0E1XB44,UniRef:UniRef50_A0A2K4FBN2,UniRef:UniRef90_A0A077UKW1
contig_1	Pyrodigal	gene	431443	432468	.	+	.	ID=GCA000160335_00390_gene;locus_tag=GCA000160335_00390;gene=aaa
contig_1	Pyrodigal	CDS	431443	432468	.	+	0	ID=GCA000160335_00390;Name=autolysin/adhesin Aaa;locus_tag=GCA000160335_00390;product=autolysin/adhesin Aaa;Dbxref=GO:0000917,GO:0005576,GO:0008745,GO:0008932,GO:0009986,GO:0031640,GO:0042742,GO:0071555;gene=aaa;Parent=GCA000160335_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001170264,COG:COG3942,COG:M,SO:0001217,UniParc:UPI0002CC89BC,UniRef:UniRef100_A0A0E1X9I3,UniRef:UniRef50_Q2G0U9,UniRef:UniRef90_Q2G0U9;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	432655	432924	.	-	.	ID=GCA000160335_00391_gene;locus_tag=GCA000160335_00391
contig_1	Pyrodigal	CDS	432655	432924	.	-	0	ID=GCA000160335_00391;Name=Cytosolic protein;locus_tag=GCA000160335_00391;product=Cytosolic protein;Parent=GCA000160335_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001129473.1,SO:0001217,UniParc:UPI0000054512,UniRef:UniRef100_Q2G0U8,UniRef:UniRef50_Q2G0U8,UniRef:UniRef90_Q2G0U8
contig_1	Pyrodigal	gene	433074	433469	.	+	.	ID=GCA000160335_00392_gene;locus_tag=GCA000160335_00392;gene=mutT
contig_1	Pyrodigal	CDS	433074	433469	.	+	0	ID=GCA000160335_00392;Name=NUDIX domain-containing protein;locus_tag=GCA000160335_00392;product=NUDIX domain-containing protein;gene=mutT;Parent=GCA000160335_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000588518.1,SO:0001217,UniParc:UPI00019CD5AF,UniRef:UniRef100_A0A7Z7QXG6,UniRef:UniRef50_A0A2K4FBI9,UniRef:UniRef90_A0AAE8PBQ1
contig_1	Pyrodigal	gene	433447	433944	.	+	.	ID=GCA000160335_00393_gene;locus_tag=GCA000160335_00393;gene=rimI
contig_1	Pyrodigal	CDS	433447	433944	.	+	0	ID=GCA000160335_00393;Name=Acetyltransferase;locus_tag=GCA000160335_00393;product=Acetyltransferase;gene=rimI;Parent=GCA000160335_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,SO:0001217,UniParc:UPI0001D16974,UniRef:UniRef100_A0A7Z7QWU6,UniRef:UniRef50_A0A6B1RF14,UniRef:UniRef90_A0A6B1RF14
contig_1	Pyrodigal	gene	434113	434895	.	-	.	ID=GCA000160335_00394_gene;locus_tag=GCA000160335_00394
contig_1	Pyrodigal	CDS	434113	434895	.	-	0	ID=GCA000160335_00394;Name=YibE/F family protein;locus_tag=GCA000160335_00394;product=YibE/F family protein;Parent=GCA000160335_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,RefSeq:WP_000994677.1,SO:0001217,UniParc:UPI00003B141F,UniRef:UniRef100_A0A7Z7QXR1,UniRef:UniRef50_Q2G0U5,UniRef:UniRef90_Q2G0U5
contig_1	Pyrodigal	gene	434892	436004	.	-	.	ID=GCA000160335_00395_gene;locus_tag=GCA000160335_00395
contig_1	Pyrodigal	CDS	434892	436004	.	-	0	ID=GCA000160335_00395;Name=YibE/F family protein;locus_tag=GCA000160335_00395;product=YibE/F family protein;Parent=GCA000160335_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,SO:0001217,UniParc:UPI00000D77D1,UniRef:UniRef100_W8U1K0,UniRef:UniRef50_Q2G0U4,UniRef:UniRef90_Q2G0U4
contig_1	Pyrodigal	gene	436125	437009	.	-	.	ID=GCA000160335_00396_gene;locus_tag=GCA000160335_00396;gene=gltC
contig_1	Pyrodigal	CDS	436125	437009	.	-	0	ID=GCA000160335_00396;Name=glutamate biosynthesis transcriptional regulator GltC;locus_tag=GCA000160335_00396;product=glutamate biosynthesis transcriptional regulator GltC;Dbxref=GO:0003700,GO:1902065;gene=gltC;Parent=GCA000160335_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000403921.1,SO:0001217,UniParc:UPI00003B1421,UniRef:UniRef100_A0AAJ5CTJ8,UniRef:UniRef50_Q2G0U3,UniRef:UniRef90_Q2G0U3
contig_1	Pyrodigal	gene	437190	441689	.	+	.	ID=GCA000160335_00397_gene;locus_tag=GCA000160335_00397;gene=gltB
contig_1	Pyrodigal	CDS	437190	441689	.	+	0	ID=GCA000160335_00397;Name=glutamate synthase large subunit;locus_tag=GCA000160335_00397;product=glutamate synthase large subunit;Dbxref=GO:0003824,GO:0006537,GO:0008152,GO:0015930,GO:0016491;gene=gltB;Parent=GCA000160335_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0070,COG:E,RefSeq:WP_000551353.1,SO:0001217,UniParc:UPI00003B1422,UniRef:UniRef100_A0A0E1XBQ3,UniRef:UniRef50_A0A2X2UM59,UniRef:UniRef90_A0A2X2UM59;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	441707	443170	.	+	.	ID=GCA000160335_00398_gene;locus_tag=GCA000160335_00398;gene=gltD
contig_1	Pyrodigal	CDS	441707	443170	.	+	0	ID=GCA000160335_00398;Name=Glutamate synthase subunit beta;locus_tag=GCA000160335_00398;product=Glutamate synthase subunit beta;gene=gltD;Parent=GCA000160335_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0493,COG:ER,RefSeq:WP_000503579.1,SO:0001217,UniParc:UPI00003B1423,UniRef:UniRef100_A0A7Z7W0R0,UniRef:UniRef50_B9DLG4,UniRef:UniRef90_A0A0E1X9F2
contig_1	tRNAscan-SE	gene	443443	443535	.	+	.	ID=GCA000160335_00399_gene;locus_tag=GCA000160335_00399;gene=trnS
contig_1	tRNAscan-SE	tRNA	443443	443535	.	+	.	ID=GCA000160335_00399;Name=tRNA-Ser(tga);locus_tag=GCA000160335_00399;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000160335_00399_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	443988	445415	.	+	.	ID=GCA000160335_00400_gene;locus_tag=GCA000160335_00400;gene=treB
contig_1	Pyrodigal	CDS	443988	445415	.	+	0	ID=GCA000160335_00400;Name=PTS trehalose transporter subunit IIBC;locus_tag=GCA000160335_00400;product=PTS trehalose transporter subunit IIBC;Dbxref=GO:0008982,GO:0009401,GO:0015574,GO:0015771,GO:0016020;gene=treB;Parent=GCA000160335_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02819,RefSeq:WP_000279366.1,SO:0001217,UniParc:UPI00003B1424,UniRef:UniRef100_A0A7Z7W1X0,UniRef:UniRef50_A0A7S8HGB6,UniRef:UniRef90_A0A2U0IK03;ec_number=2.7.1.201
contig_1	Pyrodigal	gene	445479	447119	.	+	.	ID=GCA000160335_00401_gene;locus_tag=GCA000160335_00401;gene=treC
contig_1	Pyrodigal	CDS	445479	447119	.	+	0	ID=GCA000160335_00401;Name=alpha%2Calpha-phosphotrehalase;locus_tag=GCA000160335_00401;product=alpha%2Calpha-phosphotrehalase;Dbxref=GO:0005737,GO:0005991,GO:0008788;gene=treC;Parent=GCA000160335_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_000910506.1,SO:0001217,UniParc:UPI00003B1425,UniRef:UniRef100_A0A7Z7QX06,UniRef:UniRef50_A0A1C7FDU5,UniRef:UniRef90_A0AAE2ZTT9;ec_number=3.2.1.93
contig_1	Pyrodigal	gene	447144	447872	.	+	.	ID=GCA000160335_00402_gene;locus_tag=GCA000160335_00402;gene=treR
contig_1	Pyrodigal	CDS	447144	447872	.	+	0	ID=GCA000160335_00402;Name=trehalose operon repressor;locus_tag=GCA000160335_00402;product=trehalose operon repressor;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=treR;Parent=GCA000160335_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03486,RefSeq:WP_001118677.1,SO:0001217,UniParc:UPI0001B70076,UniRef:UniRef100_UPI0001B70076,UniRef:UniRef50_A0A291JNW9,UniRef:UniRef90_A0A380DK00
contig_1	Infernal	gene	447934	448203	.	+	.	ID=GCA000160335_00403_gene;locus_tag=GCA000160335_00403;gene=Bacteria_large_SRP
contig_1	Infernal	ncRNA	447934	448203	3.9e-31	+	.	ID=GCA000160335_00403;Name=Bacterial large signal recognition particle RNA;locus_tag=GCA000160335_00403;product=Bacterial large signal recognition particle RNA;Dbxref=RFAM:RF01854;Parent=GCA000160335_00403_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01854
contig_1	Infernal	gene	448052	448151	.	+	.	ID=GCA000160335_00404_gene;locus_tag=GCA000160335_00404;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	448052	448151	9.6e-12	+	.	ID=GCA000160335_00404;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000160335_00404;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000160335_00404_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	Pyrodigal	gene	448513	449037	.	+	.	ID=GCA000160335_00405_gene;locus_tag=GCA000160335_00405;gene=yhbS
contig_1	Pyrodigal	CDS	448513	449037	.	+	0	ID=GCA000160335_00405;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00405;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000160335_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001167834.1,SO:0001217,UniParc:UPI00003B1428,UniRef:UniRef100_A0A7Z7QWT9,UniRef:UniRef50_Q2G0T6,UniRef:UniRef90_Q2G0T6
contig_1	Pyrodigal	gene	449106	450803	.	+	.	ID=GCA000160335_00406_gene;locus_tag=GCA000160335_00406;gene=dnaX
contig_1	Pyrodigal	CDS	449106	450803	.	+	0	ID=GCA000160335_00406;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000160335_00406;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0009360;gene=dnaX;Parent=GCA000160335_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,KEGG:K02343,RefSeq:WP_001109044.1,SO:0001217,UniParc:UPI00003B1429,UniRef:UniRef100_A0A7Z7QWZ1,UniRef:UniRef50_A0A9X6AJV3,UniRef:UniRef90_A0A3M9FQF8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	450893	451210	.	+	.	ID=GCA000160335_00407_gene;locus_tag=GCA000160335_00407;gene=ybaB
contig_1	Pyrodigal	CDS	450893	451210	.	+	0	ID=GCA000160335_00407;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000160335_00407;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA000160335_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,RefSeq:WP_001213992.1,SO:0001217,UniParc:UPI0000054501,UniRef:UniRef100_Q2G0T4,UniRef:UniRef50_Q2G0T4,UniRef:UniRef90_Q2G0T4
contig_1	Pyrodigal	gene	451217	451813	.	+	.	ID=GCA000160335_00408_gene;locus_tag=GCA000160335_00408;gene=recR
contig_1	Pyrodigal	CDS	451217	451813	.	+	0	ID=GCA000160335_00408;Name=recombination mediator RecR;locus_tag=GCA000160335_00408;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000160335_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_000559156.1,SO:0001217,UniParc:UPI0000054500,UniRef:UniRef100_Q2G0T3,UniRef:UniRef50_Q6GJJ3,UniRef:UniRef90_Q6GJJ3
contig_1	Infernal	gene	452801	454352	.	+	.	ID=GCA000160335_00409_gene;locus_tag=GCA000160335_00409;gene=rrs
contig_1	Infernal	rRNA	452801	454352	1.3e-49	+	.	ID=GCA000160335_00409;Name=16S ribosomal RNA;locus_tag=GCA000160335_00409;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000160335_00409_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Infernal	gene	454794	457716	.	+	.	ID=GCA000160335_00410_gene;locus_tag=GCA000160335_00410;gene=rrl
contig_1	Infernal	rRNA	454794	457716	1.4e-06	+	.	ID=GCA000160335_00410;Name=23S ribosomal RNA;locus_tag=GCA000160335_00410;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000160335_00410_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	457789	457903	.	+	.	ID=GCA000160335_00411_gene;locus_tag=GCA000160335_00411;gene=rrf
contig_1	Infernal	rRNA	457789	457903	1.1e-14	+	.	ID=GCA000160335_00411;Name=5S ribosomal RNA;locus_tag=GCA000160335_00411;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000160335_00411_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	457990	458778	.	-	.	ID=GCA000160335_00412_gene;locus_tag=GCA000160335_00412;gene=tnp
contig_1	Pyrodigal	CDS	457990	458778	.	-	0	ID=GCA000160335_00412;Name=IS3 family transposase ORF B;locus_tag=GCA000160335_00412;product=IS3 family transposase ORF B;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B142B,UniRef:UniRef100_A0A162FEK7,UniRef:UniRef50_Q49YK3,UniRef:UniRef90_A0A162FEK7
contig_1	Pyrodigal	gene	458802	459530	.	-	.	ID=GCA000160335_00413_gene;locus_tag=GCA000160335_00413;gene=tnp
contig_1	Pyrodigal	CDS	458802	459530	.	-	0	ID=GCA000160335_00413;Name=IS3 family ISSau2 transposase ORF A;locus_tag=GCA000160335_00413;product=IS3 family ISSau2 transposase ORF A;gene=tnp;Parent=GCA000160335_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau2,RefSeq:WP_000023693.1,SO:0001217,UniParc:UPI0001C0B7AB,UniRef:UniRef100_A0A0E1X7K9,UniRef:UniRef50_E0D531,UniRef:UniRef90_A0A0E1X7K9
contig_1	Pyrodigal	gene	460127	461509	.	-	.	ID=GCA000160335_00414_gene;locus_tag=GCA000160335_00414;gene=aRO8
contig_1	Pyrodigal	CDS	460127	461509	.	-	0	ID=GCA000160335_00414;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000160335_00414;product=HTH gntR-type domain-containing protein;gene=aRO8;Parent=GCA000160335_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1167,COG:KE,KEGG:K00375,RefSeq:WP_000799261.1,SO:0001217,UniParc:UPI0001B7009B,UniRef:UniRef100_UPI0001B7009B,UniRef:UniRef50_Q2G0Q2,UniRef:UniRef90_Q2G0Q2
contig_1	Pyrodigal	gene	461613	462500	.	+	.	ID=GCA000160335_00415_gene;locus_tag=GCA000160335_00415;gene=pdxS
contig_1	Pyrodigal	CDS	461613	462500	.	+	0	ID=GCA000160335_00415;Name=pyridoxal 5'-phosphate synthase subunit PdxS;locus_tag=GCA000160335_00415;product=pyridoxal 5'-phosphate synthase subunit PdxS;Dbxref=GO:0003824,GO:0006520,GO:0008615,GO:0036381,GO:0042823;gene=pdxS;Parent=GCA000160335_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003247145,COG:COG0214,COG:H,KEGG:K06215,RefSeq:WP_000034728.1,SO:0001217,UniParc:UPI0000054856,UniRef:UniRef100_Q2G0Q1,UniRef:UniRef50_P37527,UniRef:UniRef90_Q2G0Q1;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	462504	463064	.	+	.	ID=GCA000160335_00416_gene;locus_tag=GCA000160335_00416;gene=pdxT
contig_1	Pyrodigal	CDS	462504	463064	.	+	0	ID=GCA000160335_00416;Name=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;locus_tag=GCA000160335_00416;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;Dbxref=GO:0004359,GO:0005829,GO:0006543,GO:0008614,GO:0016884,GO:0036381,GO:0042823,GO:1903600;gene=pdxT;Parent=GCA000160335_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0311,COG:H,KEGG:K08681,RefSeq:WP_000690439.1,SO:0001217,UniParc:UPI0000054855,UniRef:UniRef100_Q2G0Q0,UniRef:UniRef50_Q2G0Q0,UniRef:UniRef90_Q2G0Q0;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	463271	464485	.	-	.	ID=GCA000160335_00417_gene;locus_tag=GCA000160335_00417;gene=nupC
contig_1	Pyrodigal	CDS	463271	464485	.	-	0	ID=GCA000160335_00417;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000160335_00417;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000160335_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_000547794.1,SO:0001217,UniParc:UPI0000054854,UniRef:UniRef100_Q2G0P9,UniRef:UniRef50_Q2G0P9,UniRef:UniRef90_Q2G0P9
contig_1	Pyrodigal	gene	464634	465104	.	+	.	ID=GCA000160335_00418_gene;locus_tag=GCA000160335_00418;gene=ctsR
contig_1	Pyrodigal	CDS	464634	465104	.	+	0	ID=GCA000160335_00418;Name=Transcriptional regulator CtsR;locus_tag=GCA000160335_00418;product=Transcriptional regulator CtsR;Dbxref=GO:0003677,GO:0006355;gene=ctsR;Parent=GCA000160335_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4463,COG:K,SO:0001217,UniParc:UPI0001D1697E,UniRef:UniRef100_Q2G0P8,UniRef:UniRef50_Q2G0P8,UniRef:UniRef90_Q2G0P8
contig_1	Pyrodigal	gene	465123	465689	.	+	.	ID=GCA000160335_00419_gene;locus_tag=GCA000160335_00419;gene=mcsA
contig_1	Pyrodigal	CDS	465123	465689	.	+	0	ID=GCA000160335_00419;Name=Protein-arginine kinase activator protein;locus_tag=GCA000160335_00419;product=Protein-arginine kinase activator protein;Dbxref=GO:0003677,GO:0005507,GO:0008270,GO:0046870,GO:0050897,GO:1990169,GO:1990170;gene=mcsA;Parent=GCA000160335_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3880,COG:O,RefSeq:WP_000882071.1,SO:0001217,UniParc:UPI00003B1440,UniRef:UniRef100_A0A7Z7QX53,UniRef:UniRef50_Q2G0P7,UniRef:UniRef90_Q2G0P7
contig_1	Pyrodigal	gene	465676	466686	.	+	.	ID=GCA000160335_00420_gene;locus_tag=GCA000160335_00420;gene=mcsB
contig_1	Pyrodigal	CDS	465676	466686	.	+	0	ID=GCA000160335_00420;Name=protein arginine kinase;locus_tag=GCA000160335_00420;product=protein arginine kinase;Dbxref=GO:0004111,GO:0004672,GO:0005524,GO:0005615,GO:0046314;gene=mcsB;Parent=GCA000160335_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3869,COG:O,SO:0001217,UniParc:UPI0001574414,UniRef:UniRef100_Q2G0P6,UniRef:UniRef50_Q2G0P6,UniRef:UniRef90_Q2G0P6;ec_number=2.7.14.1
contig_1	Pyrodigal	gene	466700	469156	.	+	.	ID=GCA000160335_00421_gene;locus_tag=GCA000160335_00421;gene=clpC
contig_1	Pyrodigal	CDS	466700	469156	.	+	0	ID=GCA000160335_00421;Name=ATP-dependent Clp protease ATP-binding subunit ClpC;locus_tag=GCA000160335_00421;product=ATP-dependent Clp protease ATP-binding subunit ClpC;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpC;Parent=GCA000160335_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000897145.1,SO:0001217,UniParc:UPI0001B7009C,UniRef:UniRef100_UPI0001B7009C,UniRef:UniRef50_Q2G0P5,UniRef:UniRef90_Q2G0P5
contig_1	Pyrodigal	gene	469640	471004	.	+	.	ID=GCA000160335_00422_gene;locus_tag=GCA000160335_00422;gene=radA
contig_1	Pyrodigal	CDS	469640	471004	.	+	0	ID=GCA000160335_00422;Name=DNA repair protein RadA;locus_tag=GCA000160335_00422;product=DNA repair protein RadA;Dbxref=GO:0003684,GO:0005524,GO:0006281;gene=radA;Parent=GCA000160335_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_001085222.1,SO:0001217,UniParc:UPI00003B1441,UniRef:UniRef100_A0AAJ5CSN4,UniRef:UniRef50_A5GDK5,UniRef:UniRef90_A0A380G4B0
contig_1	Pyrodigal	gene	471029	472102	.	+	.	ID=GCA000160335_00423_gene;locus_tag=GCA000160335_00423
contig_1	Pyrodigal	CDS	471029	472102	.	+	0	ID=GCA000160335_00423;Name=TRAM domain-containing protein;locus_tag=GCA000160335_00423;product=TRAM domain-containing protein;Parent=GCA000160335_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4956,COG:R,RefSeq:WP_001028376.1,SO:0001217,UniParc:UPI00000D7788,UniRef:UniRef100_Q2G242,UniRef:UniRef50_A0A9X6AJN5,UniRef:UniRef90_Q2G242
contig_1	Pyrodigal	gene	472659	474113	.	+	.	ID=GCA000160335_00424_gene;locus_tag=GCA000160335_00424;gene=gltX
contig_1	Pyrodigal	CDS	472659	474113	.	+	0	ID=GCA000160335_00424;Name=glutamate--tRNA ligase;locus_tag=GCA000160335_00424;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000160335_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_001283787.1,SO:0001217,UniParc:UPI00003B1443,UniRef:UniRef100_Q6GJE1,UniRef:UniRef50_Q97NG1,UniRef:UniRef90_Q2G241;ec_number=6.1.1.17
contig_1	Pyrodigal	gene	474504	475184	.	+	.	ID=GCA000160335_00425_gene;locus_tag=GCA000160335_00425;gene=cysE
contig_1	Pyrodigal	CDS	474504	475184	.	+	0	ID=GCA000160335_00425;Name=serine O-acetyltransferase;locus_tag=GCA000160335_00425;product=serine O-acetyltransferase;Dbxref=GO:0005737,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000160335_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1045,COG:E,RefSeq:WP_001547606.1,SO:0001217,UniParc:UPI000175C520,UniRef:UniRef100_Q6GJE0,UniRef:UniRef50_A8F961,UniRef:UniRef90_Q5HRM4;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	475168	476568	.	+	.	ID=GCA000160335_00426_gene;locus_tag=GCA000160335_00426;gene=cysS
contig_1	Pyrodigal	CDS	475168	476568	.	+	0	ID=GCA000160335_00426;Name=cysteine--tRNA ligase;locus_tag=GCA000160335_00426;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000160335_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_000631982.1,SO:0001217,UniParc:UPI00019CD63D,UniRef:UniRef100_A0A7Z7W1Y5,UniRef:UniRef50_Q06752,UniRef:UniRef90_Q2G2M6;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	476561	476965	.	+	.	ID=GCA000160335_00427_gene;locus_tag=GCA000160335_00427;gene=mrnC
contig_1	Pyrodigal	CDS	476561	476965	.	+	0	ID=GCA000160335_00427;Name=Mini-ribonuclease 3;locus_tag=GCA000160335_00427;product=Mini-ribonuclease 3;Dbxref=GO:0004525,GO:0005737,GO:0006364,GO:0019843;gene=mrnC;Parent=GCA000160335_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1939,COG:J,RefSeq:WP_000370181.1,SO:0001217,UniParc:UPI00003B1446,UniRef:UniRef100_A0A7Z7QX48,UniRef:UniRef50_Q2G2M4,UniRef:UniRef90_Q2G2M4;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	476973	477719	.	+	.	ID=GCA000160335_00428_gene;locus_tag=GCA000160335_00428;gene=rlmB
contig_1	Pyrodigal	CDS	476973	477719	.	+	0	ID=GCA000160335_00428;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000160335_00428;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259;gene=rlmB;Parent=GCA000160335_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000390332.1,SO:0001217,UniParc:UPI00000D77B1,UniRef:UniRef100_Q99W72,UniRef:UniRef50_Q49V41,UniRef:UniRef90_Q99W72;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	477719	478243	.	+	.	ID=GCA000160335_00429_gene;locus_tag=GCA000160335_00429;gene=rae1
contig_1	Pyrodigal	CDS	477719	478243	.	+	0	ID=GCA000160335_00429;Name=NYN domain-containing protein;locus_tag=GCA000160335_00429;product=NYN domain-containing protein;gene=rae1;Parent=GCA000160335_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3688,COG:J,KEGG:K06962,RefSeq:WP_000664740.1,SO:0001217,UniParc:UPI00003B1447,UniRef:UniRef100_A0A7Z7QWX5,UniRef:UniRef50_Q49V42,UniRef:UniRef90_Q2G2M5
contig_1	Pyrodigal	gene	478324	478806	.	+	.	ID=GCA000160335_00430_gene;locus_tag=GCA000160335_00430;gene=sigS
contig_1	Pyrodigal	CDS	478324	478806	.	+	0	ID=GCA000160335_00430;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000160335_00430;product=RNA polymerase sigma factor SigS;gene=sigS;Parent=GCA000160335_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2G0P4
contig_1	Pyrodigal	gene	479200	479382	.	+	.	ID=GCA000160335_00431_gene;locus_tag=GCA000160335_00431;gene=secE
contig_1	Pyrodigal	CDS	479200	479382	.	+	0	ID=GCA000160335_00431;Name=preprotein translocase subunit SecE;locus_tag=GCA000160335_00431;product=preprotein translocase subunit SecE;Dbxref=GO:0005886,GO:0006605,GO:0008320,GO:0009306,GO:0015450,GO:0043952,GO:0065002;gene=secE;Parent=GCA000160335_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_001074473.1,SO:0001217,UniParc:UPI000013579E,UniRef:UniRef100_P0A0I4,UniRef:UniRef50_P0A0I4,UniRef:UniRef90_P0A0I4
contig_1	Pyrodigal	gene	479395	479943	.	+	.	ID=GCA000160335_00432_gene;locus_tag=GCA000160335_00432;gene=nusG
contig_1	Pyrodigal	CDS	479395	479943	.	+	0	ID=GCA000160335_00432;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000160335_00432;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0006353,GO:0031564,GO:0032784,GO:0140673;gene=nusG;Parent=GCA000160335_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,RefSeq:WP_001288302.1,SO:0001217,UniParc:UPI0000054843,UniRef:UniRef100_Q2G0P2,UniRef:UniRef50_Q2G0P2,UniRef:UniRef90_Q2G0P2
contig_1	Pyrodigal	gene	480124	480546	.	+	.	ID=GCA000160335_00433_gene;locus_tag=GCA000160335_00433;gene=rplK
contig_1	Pyrodigal	CDS	480124	480546	.	+	0	ID=GCA000160335_00433;Name=50S ribosomal protein L11;locus_tag=GCA000160335_00433;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000160335_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_001085792.1,SO:0001217,UniParc:UPI0000165A2E,UniRef:UniRef100_P0A0F4,UniRef:UniRef50_P0A0F4,UniRef:UniRef90_P0A0F4
contig_1	Pyrodigal	gene	480754	481446	.	+	.	ID=GCA000160335_00434_gene;locus_tag=GCA000160335_00434;gene=rplA
contig_1	Pyrodigal	CDS	480754	481446	.	+	0	ID=GCA000160335_00434;Name=50S ribosomal protein L1;locus_tag=GCA000160335_00434;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843;gene=rplA;Parent=GCA000160335_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_001074619.1,SO:0001217,UniParc:UPI0000054841,UniRef:UniRef100_Q2G0P0,UniRef:UniRef50_Q5M2K0,UniRef:UniRef90_Q2G0P0
contig_1	Infernal	regulatory_region	481534	481680	8.3e-11	+	.	ID=HBCHLJIIAO_168;Name=Ribosomal protein L10 leader;product=Ribosomal protein L10 leader;Dbxref=RFAM:RF00557;inference=profile:Rfam:RF00557;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	481718	482218	.	+	.	ID=GCA000160335_00435_gene;locus_tag=GCA000160335_00435;gene=rplJ
contig_1	Pyrodigal	CDS	481718	482218	.	+	0	ID=GCA000160335_00435;Name=50S ribosomal protein L10;locus_tag=GCA000160335_00435;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0070180;gene=rplJ;Parent=GCA000160335_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_001273085.1,SO:0001217,UniParc:UPI0000054840,UniRef:UniRef100_Q2G0N9,UniRef:UniRef50_P66042,UniRef:UniRef90_Q2G0N9
contig_1	Pyrodigal	gene	482261	482629	.	+	.	ID=GCA000160335_00436_gene;locus_tag=GCA000160335_00436;gene=rplL
contig_1	Pyrodigal	CDS	482261	482629	.	+	0	ID=GCA000160335_00436;Name=50S ribosomal protein L7/L12;locus_tag=GCA000160335_00436;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA000160335_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_001273587.1,SO:0001217,UniParc:UPI00003B144B,UniRef:UniRef100_Q6GJC8,UniRef:UniRef50_P48860,UniRef:UniRef90_P48860
contig_1	Pyrodigal	gene	482804	483412	.	+	.	ID=GCA000160335_00437_gene;locus_tag=GCA000160335_00437;gene=rsmC
contig_1	Pyrodigal	CDS	482804	483412	.	+	0	ID=GCA000160335_00437;Name=Methyltransferase small domain-containing protein;locus_tag=GCA000160335_00437;product=Methyltransferase small domain-containing protein;gene=rsmC;Parent=GCA000160335_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_000020304.1,SO:0001217,UniParc:UPI000005483D,UniRef:UniRef100_Q2G0N7,UniRef:UniRef50_A0A556PLC6,UniRef:UniRef90_Q2G0N7
contig_1	Pyrodigal	gene	483627	487178	.	+	.	ID=GCA000160335_00438_gene;locus_tag=GCA000160335_00438;gene=rpoB
contig_1	Pyrodigal	CDS	483627	487178	.	+	0	ID=GCA000160335_00438;Name=DNA-directed RNA polymerase subunit beta RpoB;locus_tag=GCA000160335_00438;product=DNA-directed RNA polymerase subunit beta RpoB;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA000160335_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_000918664.1,SO:0001217,UniParc:UPI00003B144C,UniRef:UniRef100_Q6GJC6,UniRef:UniRef50_P47768,UniRef:UniRef90_P47768;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	487315	490938	.	+	.	ID=GCA000160335_00439_gene;locus_tag=GCA000160335_00439;gene=rpoC
contig_1	Pyrodigal	CDS	487315	490938	.	+	0	ID=GCA000160335_00439;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000160335_00439;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000160335_00439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,SO:0001217,UniParc:UPI00003B144D,UniRef:UniRef100_Q6GJC5,UniRef:UniRef50_P37871,UniRef:UniRef90_Q2G0N5;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	491075	491329	.	+	.	ID=GCA000160335_00440_gene;locus_tag=GCA000160335_00440;gene=rpl7Ae
contig_1	Pyrodigal	CDS	491075	491329	.	+	0	ID=GCA000160335_00440;Name=RNA-binding protein MW0499;locus_tag=GCA000160335_00440;product=RNA-binding protein MW0499;Dbxref=GO:0003723;gene=rpl7Ae;Parent=GCA000160335_00440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1358,COG:J,KEGG:K07590,RefSeq:WP_000031892.1,SO:0001217,UniParc:UPI00001353D9,UniRef:UniRef100_P0A0G6,UniRef:UniRef50_P0A0G6,UniRef:UniRef90_P0A0G6
contig_1	Pyrodigal	gene	491427	491840	.	+	.	ID=GCA000160335_00441_gene;locus_tag=GCA000160335_00441;gene=rpsL
contig_1	Pyrodigal	CDS	491427	491840	.	+	0	ID=GCA000160335_00441;Name=30S ribosomal protein S12;locus_tag=GCA000160335_00441;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsL;Parent=GCA000160335_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,KEGG:K02950,RefSeq:WP_001142337.1,SO:0001217,UniParc:UPI0000048026,UniRef:UniRef100_P0A0H0,UniRef:UniRef50_P0A0H0,UniRef:UniRef90_P0A0H0
contig_1	Pyrodigal	gene	491906	492376	.	+	.	ID=GCA000160335_00442_gene;locus_tag=GCA000160335_00442;gene=rpsG
contig_1	Pyrodigal	CDS	491906	492376	.	+	0	ID=GCA000160335_00442;Name=30S ribosomal protein S7;locus_tag=GCA000160335_00442;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000160335_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_001137495.1,SO:0001217,UniParc:UPI000004801A,UniRef:UniRef100_P48940,UniRef:UniRef50_P02359,UniRef:UniRef90_P48940
contig_1	Pyrodigal	gene	492499	494580	.	+	.	ID=GCA000160335_00443_gene;locus_tag=GCA000160335_00443;gene=fusA
contig_1	Pyrodigal	CDS	492499	494580	.	+	0	ID=GCA000160335_00443;Name=elongation factor G FusA;locus_tag=GCA000160335_00443;product=elongation factor G FusA;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790;gene=fusA;Parent=GCA000160335_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_000090315.1,SO:0001217,UniParc:UPI0000052287,UniRef:UniRef100_Q2G0N1,UniRef:UniRef50_Q9SI75,UniRef:UniRef90_Q2G0N1
contig_1	Pyrodigal	gene	494797	495981	.	+	.	ID=GCA000160335_00444_gene;locus_tag=GCA000160335_00444;gene=tuf
contig_1	Pyrodigal	CDS	494797	495981	.	+	0	ID=GCA000160335_00444;Name=elongation factor Tu;locus_tag=GCA000160335_00444;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414;gene=tuf;Parent=GCA000160335_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_001040568.1,SO:0001217,UniParc:UPI0000054837,UniRef:UniRef100_Q2G0N0,UniRef:UniRef50_Q74JU6,UniRef:UniRef90_Q2G0N0
contig_1	Pyrodigal	gene	496262	497437	.	-	.	ID=GCA000160335_00445_gene;locus_tag=GCA000160335_00445
contig_1	Pyrodigal	CDS	496262	497437	.	-	0	ID=GCA000160335_00445;Name=Peptidase;locus_tag=GCA000160335_00445;product=Peptidase;Parent=GCA000160335_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01436,RefSeq:WP_000887922.1,SO:0001217,UniParc:UPI00003B144F,UniRef:UniRef100_A0A167JR25,UniRef:UniRef50_A0A2I7Y808,UniRef:UniRef90_A0A167JR25;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	497608	498795	.	+	.	ID=GCA000160335_00446_gene;locus_tag=GCA000160335_00446;gene=bioF
contig_1	Pyrodigal	CDS	497608	498795	.	+	0	ID=GCA000160335_00446;Name=glycine C-acetyltransferase;locus_tag=GCA000160335_00446;product=glycine C-acetyltransferase;Dbxref=GO:0008890,GO:0009058,GO:0016740,GO:0030170;gene=bioF;Parent=GCA000160335_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000250820.1,SO:0001217,UniParc:UPI00003B1450,UniRef:UniRef100_Q6GJB8,UniRef:UniRef50_Q73KM3,UniRef:UniRef90_P60121;ec_number=2.3.1.29
contig_1	Pyrodigal	gene	499071	499949	.	+	.	ID=GCA000160335_00447_gene;locus_tag=GCA000160335_00447;gene=hchA
contig_1	Pyrodigal	CDS	499071	499949	.	+	0	ID=GCA000160335_00447;Name=glyoxalase III HchA;locus_tag=GCA000160335_00447;product=glyoxalase III HchA;Dbxref=GO:0005737,GO:0006281,GO:0016790,GO:0019172,GO:0019243,GO:0030091,GO:0036524;gene=hchA;Parent=GCA000160335_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,KEGG:K05523,RefSeq:WP_000076412.1,SO:0001217,UniParc:UPI00019F4E13,UniRef:UniRef100_A0A7Z7QX77,UniRef:UniRef50_Q2G0M7,UniRef:UniRef90_Q2G0M7;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	500107	501744	.	+	.	ID=GCA000160335_00448_gene;locus_tag=GCA000160335_00448;gene=araB
contig_1	Pyrodigal	CDS	500107	501744	.	+	0	ID=GCA000160335_00448;Name=ribulokinase;locus_tag=GCA000160335_00448;product=ribulokinase;Dbxref=GO:0005524,GO:0005737,GO:0008741,GO:0019150,GO:0019569;gene=araB;Parent=GCA000160335_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1069,COG:G,RefSeq:WP_000122331.1,SO:0001217,UniParc:UPI0002CA6A7F,UniRef:UniRef100_A0A7Z7QXM3,UniRef:UniRef50_Q2G0M6,UniRef:UniRef90_Q2G0M6;ec_number=2.7.1.16
contig_1	Pyrodigal	gene	501958	502923	.	+	.	ID=GCA000160335_00449_gene;locus_tag=GCA000160335_00449;gene=wcaG
contig_1	Pyrodigal	CDS	501958	502923	.	+	0	ID=GCA000160335_00449;Name=putative epimerase/dehydratase SAR0558;locus_tag=GCA000160335_00449;product=putative epimerase/dehydratase SAR0558;Dbxref=GO:0006567,GO:0008743;gene=wcaG;Parent=GCA000160335_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000723304.1,SO:0001217,UniParc:UPI00003B1453,UniRef:UniRef100_Q6GJB5,UniRef:UniRef50_Q2G0M5,UniRef:UniRef90_Q2G0M5
contig_1	Pyrodigal	gene	503257	504333	.	+	.	ID=GCA000160335_00450_gene;locus_tag=GCA000160335_00450;gene=ilvE
contig_1	Pyrodigal	CDS	503257	504333	.	+	0	ID=GCA000160335_00450;Name=branched-chain amino acid aminotransferase;locus_tag=GCA000160335_00450;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081,GO:0009097,GO:0009098,GO:0009099,GO:0052655,GO:0052656;gene=ilvE;Parent=GCA000160335_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_000076025.1,SO:0001217,UniParc:UPI00003B1454,UniRef:UniRef100_Q6GJB4,UniRef:UniRef50_Q8CQ78,UniRef:UniRef90_Q5HIC1;ec_number=2.6.1.42
contig_1	Pyrodigal	gene	504584	505267	.	+	.	ID=GCA000160335_00451_gene;locus_tag=GCA000160335_00451;gene=gph
contig_1	Pyrodigal	CDS	504584	505267	.	+	0	ID=GCA000160335_00451;Name=HAD family hydrolase;locus_tag=GCA000160335_00451;product=HAD family hydrolase;gene=gph;Parent=GCA000160335_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000454783.1,SO:0001217,UniParc:UPI00003B1455,UniRef:UniRef100_A0A7Z7QXL4,UniRef:UniRef50_A0A2Y2GZN0,UniRef:UniRef90_A0A2Y2GZN0
contig_1	Pyrodigal	gene	505383	506045	.	-	.	ID=GCA000160335_00452_gene;locus_tag=GCA000160335_00452;gene=dck
contig_1	Pyrodigal	CDS	505383	506045	.	-	0	ID=GCA000160335_00452;Name=Deoxyadenosine/deoxycytidine kinase;locus_tag=GCA000160335_00452;product=Deoxyadenosine/deoxycytidine kinase;gene=dck;Parent=GCA000160335_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,RefSeq:WP_001067261.1,SO:0001217,UniParc:UPI00000D7874,UniRef:UniRef100_A0A7Z7W0U7,UniRef:UniRef50_P37529,UniRef:UniRef90_A0A0U1MET2
contig_1	Pyrodigal	gene	506038	506655	.	-	.	ID=GCA000160335_00453_gene;locus_tag=GCA000160335_00453;gene=dck
contig_1	Pyrodigal	CDS	506038	506655	.	-	0	ID=GCA000160335_00453;Name=Deoxynucleoside kinase domain-containing protein;locus_tag=GCA000160335_00453;product=Deoxynucleoside kinase domain-containing protein;gene=dck;Parent=GCA000160335_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,KEGG:K15518,RefSeq:WP_001039519.1,SO:0001217,UniParc:UPI000005482C,UniRef:UniRef100_Q2G0M0,UniRef:UniRef50_A0A380GAH5,UniRef:UniRef90_Q2G0M0;ec_number=2.7.1.113
contig_1	Pyrodigal	gene	506722	507192	.	+	.	ID=GCA000160335_00454_gene;locus_tag=GCA000160335_00454;gene=tadA
contig_1	Pyrodigal	CDS	506722	507192	.	+	0	ID=GCA000160335_00454;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA000160335_00454;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270,GO:0052717;gene=tadA;Parent=GCA000160335_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_000180278.1,SO:0001217,UniParc:UPI00003B1456,UniRef:UniRef100_A0A7Z7W154,UniRef:UniRef50_Q99W51,UniRef:UniRef90_Q99W51;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	507339	508208	.	+	.	ID=GCA000160335_00455_gene;locus_tag=GCA000160335_00455
contig_1	Pyrodigal	CDS	507339	508208	.	+	0	ID=GCA000160335_00455;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000160335_00455;product=Cof-type HAD-IIB family hydrolase;Parent=GCA000160335_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21064,RefSeq:WP_000593364.1,SO:0001217,UniParc:UPI00003B1457,UniRef:UniRef100_A0A7Z7W0T7,UniRef:UniRef50_Q2G0L8,UniRef:UniRef90_A0A2K4AEI2;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	508228	508794	.	+	.	ID=GCA000160335_00456_gene;locus_tag=GCA000160335_00456;gene=azo1
contig_1	Pyrodigal	CDS	508228	508794	.	+	0	ID=GCA000160335_00456;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000160335_00456;product=FMN-dependent NADPH-azoreductase;Dbxref=GO:0005829,GO:0010181,GO:0016491;gene=azo1;Parent=GCA000160335_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,RefSeq:WP_000677261.1,SO:0001217,UniParc:UPI0000054828,UniRef:UniRef100_Q2G0L7,UniRef:UniRef50_Q2G0L7,UniRef:UniRef90_Q2G0L7;ec_number=1.7.-.-
contig_1	Pyrodigal	gene	509225	512107	.	+	.	ID=GCA000160335_00457_gene;locus_tag=GCA000160335_00457
contig_1	Pyrodigal	CDS	509225	512107	.	+	0	ID=GCA000160335_00457;Name=Serine-aspartate repeat-containing protein C;locus_tag=GCA000160335_00457;product=Serine-aspartate repeat-containing protein C;Parent=GCA000160335_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7Z7QX64
contig_1	Pyrodigal	gene	512469	516551	.	+	.	ID=GCA000160335_00458_gene;locus_tag=GCA000160335_00458;gene=sdrD
contig_1	Pyrodigal	CDS	512469	516551	.	+	0	ID=GCA000160335_00458;Name=MSCRAMM family adhesin SdrD;locus_tag=GCA000160335_00458;product=MSCRAMM family adhesin SdrD;Dbxref=GO:0007155;gene=sdrD;Parent=GCA000160335_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_020967612.1,SO:0001217,UniParc:UPI00038DC1A8,UniRef:UniRef100_UPI00038DC1A8,UniRef:UniRef50_A0A0E1XIG1,UniRef:UniRef90_A0A0E1XIG1
contig_1	Pyrodigal	gene	516948	520415	.	+	.	ID=GCA000160335_00459_gene;locus_tag=GCA000160335_00459;gene=sdrE
contig_1	Pyrodigal	CDS	516948	520415	.	+	0	ID=GCA000160335_00459;Name=MSCRAMM family adhesin SdrE;locus_tag=GCA000160335_00459;product=MSCRAMM family adhesin SdrE;gene=sdrE;Parent=GCA000160335_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_046462978,BlastRules:WP_047430389,SO:0001217,UniRef:UniRef50_A0A380DKI8,UniRef:UniRef90_A0A380DKI8
contig_1	Pyrodigal	gene	520534	522006	.	+	.	ID=GCA000160335_00460_gene;locus_tag=GCA000160335_00460;gene=rfaB
contig_1	Pyrodigal	CDS	520534	522006	.	+	0	ID=GCA000160335_00460;Name=Glycosyltransferase;locus_tag=GCA000160335_00460;product=Glycosyltransferase;gene=rfaB;Parent=GCA000160335_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106715.1,SO:0001217,UniParc:UPI00003B145A,UniRef:UniRef100_A0A7Z7QX22,UniRef:UniRef50_A0AAE2ZQD7,UniRef:UniRef90_A0AAE2ZQD7
contig_1	Pyrodigal	gene	522131	523621	.	-	.	ID=GCA000160335_00461_gene;locus_tag=GCA000160335_00461;gene=rfaB
contig_1	Pyrodigal	CDS	522131	523621	.	-	0	ID=GCA000160335_00461;Name=Glycosyl transferase family 1 domain-containing protein;locus_tag=GCA000160335_00461;product=Glycosyl transferase family 1 domain-containing protein;gene=rfaB;Parent=GCA000160335_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106108.1,SO:0001217,UniParc:UPI00019F4DF0,UniRef:UniRef100_A0A7Z7QXX8,UniRef:UniRef50_Q2G0L2,UniRef:UniRef90_Q2G0L2
contig_1	Pyrodigal	gene	523903	524781	.	-	.	ID=GCA000160335_00462_gene;locus_tag=GCA000160335_00462;gene=folE2
contig_1	Pyrodigal	CDS	523903	524781	.	-	0	ID=GCA000160335_00462;Name=GTP cyclohydrolase FolE2;locus_tag=GCA000160335_00462;product=GTP cyclohydrolase FolE2;Dbxref=GO:0003933,GO:0003934,GO:0046654;gene=folE2;Parent=GCA000160335_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1469,COG:H,KEGG:K09007,RefSeq:WP_000134231.1,SO:0001217,UniParc:UPI00003B145C,UniRef:UniRef100_Q6GJA3,UniRef:UniRef50_Q2G0L1,UniRef:UniRef90_Q2G0L1;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	524794	525459	.	-	.	ID=GCA000160335_00463_gene;locus_tag=GCA000160335_00463;gene=bshB2
contig_1	Pyrodigal	CDS	524794	525459	.	-	0	ID=GCA000160335_00463;Name=bacillithiol biosynthesis deacetylase BshB2;locus_tag=GCA000160335_00463;product=bacillithiol biosynthesis deacetylase BshB2;Dbxref=GO:0019213;gene=bshB2;Parent=GCA000160335_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2120,COG:G,KEGG:K22135,RefSeq:WP_000129072.1,SO:0001217,UniParc:UPI00003B145D,UniRef:UniRef100_A0A7Z7W0V3,UniRef:UniRef50_A0A8J4SJ37,UniRef:UniRef90_Q2G0L0;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	525473	525835	.	-	.	ID=GCA000160335_00464_gene;locus_tag=GCA000160335_00464
contig_1	Pyrodigal	CDS	525473	525835	.	-	0	ID=GCA000160335_00464;Name=DUF1806 domain-containing protein;locus_tag=GCA000160335_00464;product=DUF1806 domain-containing protein;Parent=GCA000160335_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025173843.1,SO:0001217,UniParc:UPI00046C4195,UniRef:UniRef100_UPI00046C4195,UniRef:UniRef50_A0A7U7JT15,UniRef:UniRef90_A0A7U7JT15
contig_1	Pyrodigal	gene	526112	526870	.	+	.	ID=GCA000160335_00465_gene;locus_tag=GCA000160335_00465;gene=nagB
contig_1	Pyrodigal	CDS	526112	526870	.	+	0	ID=GCA000160335_00465;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000160335_00465;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0005737,GO:0005975,GO:0006043,GO:0006044,GO:0006046,GO:0019262,GO:0042802;gene=nagB;Parent=GCA000160335_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_000866426.1,SO:0001217,UniParc:UPI00003B145F,UniRef:UniRef100_Q6GJA0,UniRef:UniRef50_Q2G0K8,UniRef:UniRef90_Q2G0K8;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	526947	527579	.	+	.	ID=GCA000160335_00466_gene;locus_tag=GCA000160335_00466
contig_1	Pyrodigal	CDS	526947	527579	.	+	0	ID=GCA000160335_00466;Name=3-hexulose-6-phosphate synthase;locus_tag=GCA000160335_00466;product=3-hexulose-6-phosphate synthase;Dbxref=GO:0004590,GO:0006207,GO:0006730,GO:0019647,GO:0019854,GO:0033982,GO:0043801;Parent=GCA000160335_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422864.1,SO:0001217,UniParc:UPI00000D9CB5,UniRef:UniRef100_Q6GJ99,UniRef:UniRef50_P42405,UniRef:UniRef90_Q2FJ70;ec_number=4.1.2.43
contig_1	Pyrodigal	gene	527581	528129	.	+	.	ID=GCA000160335_00467_gene;locus_tag=GCA000160335_00467;gene=gutQ
contig_1	Pyrodigal	CDS	527581	528129	.	+	0	ID=GCA000160335_00467;Name=6-phospho-3-hexuloisomerase (PHI);locus_tag=GCA000160335_00467;product=6-phospho-3-hexuloisomerase (PHI);gene=gutQ;Parent=GCA000160335_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,KEGG:K08094,RefSeq:WP_001051591.1,SO:0001217,UniParc:UPI00003B1460,UniRef:UniRef100_A0A7Z7W200,UniRef:UniRef50_A0A380G9B8,UniRef:UniRef90_A0A0U1MEX0;ec_number=5.3.1.27
contig_1	Pyrodigal	gene	528242	528889	.	+	.	ID=GCA000160335_00468_gene;locus_tag=GCA000160335_00468;gene=gph
contig_1	Pyrodigal	CDS	528242	528889	.	+	0	ID=GCA000160335_00468;Name=HAD family hydrolase;locus_tag=GCA000160335_00468;product=HAD family hydrolase;gene=gph;Parent=GCA000160335_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000667395.1,SO:0001217,UniParc:UPI00003B1461,UniRef:UniRef100_A0A7Z7QX69,UniRef:UniRef50_A0A3M9EEU9,UniRef:UniRef90_A0A3M9EEU9
contig_1	Pyrodigal	gene	529392	530792	.	+	.	ID=GCA000160335_00469_gene;locus_tag=GCA000160335_00469;gene=proP
contig_1	Pyrodigal	CDS	529392	530792	.	+	0	ID=GCA000160335_00469;Name=Putative proline/betaine transporter;locus_tag=GCA000160335_00469;product=Putative proline/betaine transporter;Dbxref=GO:0005886,GO:0015293;gene=proP;Parent=GCA000160335_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03762,RefSeq:WP_000347063.1,SO:0001217,UniParc:UPI00019F4DEF,UniRef:UniRef100_A0A7Z7QXL9,UniRef:UniRef50_Q4L3Q4,UniRef:UniRef90_Q5HIA2
contig_1	Pyrodigal	gene	531337	532713	.	+	.	ID=GCA000160335_00470_gene;locus_tag=GCA000160335_00470;gene=vraA
contig_1	Pyrodigal	CDS	531337	532713	.	+	0	ID=GCA000160335_00470;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000160335_00470;product=Putative long chain fatty acid-CoA ligase VraA;Dbxref=GO:0006631,GO:0031956;gene=vraA;Parent=GCA000160335_00470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000382589.1,SO:0001217,UniParc:UPI0001B700F3,UniRef:UniRef100_UPI0001B700F3,UniRef:UniRef50_Q5HIA1,UniRef:UniRef90_Q6GJ94;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	532715	533854	.	+	.	ID=GCA000160335_00471_gene;locus_tag=GCA000160335_00471;gene=vraB
contig_1	Pyrodigal	CDS	532715	533854	.	+	0	ID=GCA000160335_00471;Name=Putative acetyl-CoA C-acetyltransferase VraB;locus_tag=GCA000160335_00471;product=Putative acetyl-CoA C-acetyltransferase VraB;Dbxref=GO:0003988,GO:0006635,GO:0010124;gene=vraB;Parent=GCA000160335_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001070682.1,SO:0001217,UniParc:UPI00003B1465,UniRef:UniRef100_Q6GJ93,UniRef:UniRef50_Q7A2W9,UniRef:UniRef90_Q7A2W9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	533829	534194	.	+	.	ID=GCA000160335_00472_gene;locus_tag=GCA000160335_00472;gene=vraC
contig_1	Pyrodigal	CDS	533829	534194	.	+	0	ID=GCA000160335_00472;Name=Protein VraC;locus_tag=GCA000160335_00472;product=Protein VraC;gene=vraC;Parent=GCA000160335_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165054.1,SO:0001217,UniParc:UPI00003B1466,UniRef:UniRef100_Q6GJ92,UniRef:UniRef50_Q5HI99,UniRef:UniRef90_Q5HI99
contig_1	Pyrodigal	gene	534197	534466	.	+	.	ID=GCA000160335_00473_gene;locus_tag=GCA000160335_00473
contig_1	Pyrodigal	CDS	534197	534466	.	+	0	ID=GCA000160335_00473;Name=Phage protein;locus_tag=GCA000160335_00473;product=Phage protein;Parent=GCA000160335_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000671097.1,SO:0001217,UniParc:UPI00003B1467,UniRef:UniRef100_A0A0E1XAC4,UniRef:UniRef50_A0A7U7JSW5,UniRef:UniRef90_X5EG78
contig_1	Pyrodigal	gene	534667	534834	.	-	.	ID=GCA000160335_00474_gene;locus_tag=GCA000160335_00474;gene=vraX
contig_1	Pyrodigal	CDS	534667	534834	.	-	0	ID=GCA000160335_00474;Name=Protein VraX;locus_tag=GCA000160335_00474;product=Protein VraX;gene=vraX;Parent=GCA000160335_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000587960.1,SO:0001217,UniParc:UPI00003B1468,UniRef:UniRef100_Q6GJ90,UniRef:UniRef50_Q5HRG9,UniRef:UniRef90_Q5HI97
contig_1	Pyrodigal	gene	535368	536198	.	-	.	ID=GCA000160335_00475_gene;locus_tag=GCA000160335_00475;gene=pdxK
contig_1	Pyrodigal	CDS	535368	536198	.	-	0	ID=GCA000160335_00475;Name=Putative pyridoxine kinase;locus_tag=GCA000160335_00475;product=Putative pyridoxine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008478,GO:0008902,GO:0008972,GO:0009228,GO:0046872;gene=pdxK;Parent=GCA000160335_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_001185462.1,SO:0001217,UniParc:UPI0000054815,UniRef:UniRef100_Q5HI96,UniRef:UniRef50_Q8CTQ7,UniRef:UniRef90_Q5HI96;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	536382	537038	.	+	.	ID=GCA000160335_00476_gene;locus_tag=GCA000160335_00476;gene=ung
contig_1	Pyrodigal	CDS	536382	537038	.	+	0	ID=GCA000160335_00476;Name=uracil-DNA glycosylase;locus_tag=GCA000160335_00476;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0097510;gene=ung;Parent=GCA000160335_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_000455258.1,SO:0001217,UniParc:UPI00003B1469,UniRef:UniRef100_Q6GJ88,UniRef:UniRef50_Q2G0J7,UniRef:UniRef90_Q2G0J7;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	537039	537419	.	+	.	ID=GCA000160335_00477_gene;locus_tag=GCA000160335_00477;gene=ywdI
contig_1	Pyrodigal	CDS	537039	537419	.	+	0	ID=GCA000160335_00477;Name=YwdI family protein;locus_tag=GCA000160335_00477;product=YwdI family protein;gene=ywdI;Parent=GCA000160335_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248110.1,SO:0001217,UniParc:UPI0001B700F4,UniRef:UniRef100_UPI0001B700F4,UniRef:UniRef50_Q2G0J6,UniRef:UniRef90_Q2G0J6
contig_1	Pyrodigal	gene	537552	537920	.	+	.	ID=GCA000160335_00478_gene;locus_tag=GCA000160335_00478;gene=ygdD
contig_1	Pyrodigal	CDS	537552	537920	.	+	0	ID=GCA000160335_00478;Name=UPF0382 membrane protein SACOL0629;locus_tag=GCA000160335_00478;product=UPF0382 membrane protein SACOL0629;Dbxref=GO:0005886;gene=ygdD;Parent=GCA000160335_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_000765183.1,SO:0001217,UniParc:UPI0000054811,UniRef:UniRef100_Q2G0J5,UniRef:UniRef50_Q5HRG3,UniRef:UniRef90_Q2G0J5
contig_1	Pyrodigal	gene	538041	539525	.	+	.	ID=GCA000160335_00479_gene;locus_tag=GCA000160335_00479;gene=potE
contig_1	Pyrodigal	CDS	538041	539525	.	+	0	ID=GCA000160335_00479;Name=APC family permease;locus_tag=GCA000160335_00479;product=APC family permease;gene=potE;Parent=GCA000160335_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000412518.1,SO:0001217,UniParc:UPI00019F4DED,UniRef:UniRef100_A0A2X2JVD1,UniRef:UniRef50_Q2G0J4,UniRef:UniRef90_Q2G0J4
contig_1	Pyrodigal	gene	539667	540119	.	-	.	ID=GCA000160335_00480_gene;locus_tag=GCA000160335_00480;gene=yjjB
contig_1	Pyrodigal	CDS	539667	540119	.	-	0	ID=GCA000160335_00480;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000160335_00480;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000160335_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000498572.1,SO:0001217,UniParc:UPI000005480F,UniRef:UniRef100_Q2G0J3,UniRef:UniRef50_Q2G0J3,UniRef:UniRef90_Q2G0J3
contig_1	Pyrodigal	gene	540132	540896	.	-	.	ID=GCA000160335_00481_gene;locus_tag=GCA000160335_00481;gene=yjjP
contig_1	Pyrodigal	CDS	540132	540896	.	-	0	ID=GCA000160335_00481;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000160335_00481;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000160335_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_000354088.1,SO:0001217,UniParc:UPI0000052269,UniRef:UniRef100_Q2G0J2,UniRef:UniRef50_Q2G0J2,UniRef:UniRef90_Q2G0J2
contig_1	Infernal	gene	541137	541275	.	+	.	ID=GCA000160335_00482_gene;locus_tag=GCA000160335_00482;gene=rsaA
contig_1	Infernal	ncRNA	541137	541275	6.3e-17	+	.	ID=GCA000160335_00482;Name=RNA Staph. aureus A;locus_tag=GCA000160335_00482;gene=rsaA;product=RNA Staph. aureus A;Dbxref=RFAM:RF01816;Parent=GCA000160335_00482_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01816
contig_1	Pyrodigal	gene	541444	542196	.	-	.	ID=GCA000160335_00483_gene;locus_tag=GCA000160335_00483;gene=hemQ
contig_1	Pyrodigal	CDS	541444	542196	.	-	0	ID=GCA000160335_00483;Name=hydrogen peroxide-dependent heme synthase;locus_tag=GCA000160335_00483;product=hydrogen peroxide-dependent heme synthase;Dbxref=GO:0004601,GO:0006783,GO:0006785,GO:0020037,GO:0046872;gene=hemQ;Parent=GCA000160335_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3253,COG:HP,RefSeq:WP_000075713.1,SO:0001217,UniParc:UPI00003B146E,UniRef:UniRef100_Q6GJ81,UniRef:UniRef50_Q8Y5F1,UniRef:UniRef90_Q2G0J1;ec_number=1.3.98.5
contig_1	Pyrodigal	gene	542364	543350	.	+	.	ID=GCA000160335_00484_gene;locus_tag=GCA000160335_00484;gene=pta
contig_1	Pyrodigal	CDS	542364	543350	.	+	0	ID=GCA000160335_00484;Name=phosphate acetyltransferase;locus_tag=GCA000160335_00484;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006085,GO:0006086,GO:0008959;gene=pta;Parent=GCA000160335_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0280,RefSeq:WP_000774286.1,SO:0001217,UniParc:UPI00019CD5A1,UniRef:UniRef100_A0A7Z7QX83,UniRef:UniRef50_P39646,UniRef:UniRef90_Q6GJ80;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	543353	544189	.	+	.	ID=GCA000160335_00485_gene;locus_tag=GCA000160335_00485;gene=lipL
contig_1	Pyrodigal	CDS	543353	544189	.	+	0	ID=GCA000160335_00485;Name=Octanoyl-[GcvH]:protein N-octanoyltransferase;locus_tag=GCA000160335_00485;product=Octanoyl-[GcvH]:protein N-octanoyltransferase;Dbxref=GO:0009107,GO:0033819;gene=lipL;Parent=GCA000160335_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K16869,RefSeq:WP_000362355.1,SO:0001217,UniParc:UPI00003B1470,UniRef:UniRef100_A0AAJ5CSR4,UniRef:UniRef50_Q2G0I9,UniRef:UniRef90_Q2G0I9;ec_number=2.3.1.204
contig_1	Pyrodigal	gene	544776	545696	.	+	.	ID=GCA000160335_00486_gene;locus_tag=GCA000160335_00486;gene=mvk
contig_1	Pyrodigal	CDS	544776	545696	.	+	0	ID=GCA000160335_00486;Name=mevalonate kinase;locus_tag=GCA000160335_00486;product=mevalonate kinase;Dbxref=GO:0004496,GO:0005524,GO:0005737,GO:0016126,GO:0019287;gene=mvk;Parent=GCA000160335_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00869,RefSeq:WP_000197032.1,SO:0001217,UniParc:UPI00003B1471,UniRef:UniRef100_A0A7Z7QX17,UniRef:UniRef50_A0A2K4AEE5,UniRef:UniRef90_A0A2K4AEE5;ec_number=2.7.1.36
contig_1	Pyrodigal	gene	545701	546684	.	+	.	ID=GCA000160335_00487_gene;locus_tag=GCA000160335_00487;gene=mvaD
contig_1	Pyrodigal	CDS	545701	546684	.	+	0	ID=GCA000160335_00487;Name=diphosphomevalonate decarboxylase;locus_tag=GCA000160335_00487;product=diphosphomevalonate decarboxylase;Dbxref=GO:0004163,GO:0005829,GO:0019287;gene=mvaD;Parent=GCA000160335_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3407,COG:I,KEGG:K01597,RefSeq:WP_000597329.1,SO:0001217,UniParc:UPI0001B7022B,UniRef:UniRef100_UPI0001B7022B,UniRef:UniRef50_Q9FD68,UniRef:UniRef90_Q9FD84;ec_number=4.1.1.33
contig_1	Pyrodigal	gene	546697	547773	.	+	.	ID=GCA000160335_00488_gene;locus_tag=GCA000160335_00488;gene=eRG12
contig_1	Pyrodigal	CDS	546697	547773	.	+	0	ID=GCA000160335_00488;Name=phosphomevalonate kinase;locus_tag=GCA000160335_00488;product=phosphomevalonate kinase;Dbxref=GO:0004631,GO:0016126,GO:0019287;gene=eRG12;Parent=GCA000160335_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00938,RefSeq:WP_000616885.1,SO:0001217,UniParc:UPI0000054808,UniRef:UniRef100_Q2G0I6,UniRef:UniRef50_B9DKS0,UniRef:UniRef90_A0A077VHR5;ec_number=2.7.4.2
contig_1	Pyrodigal	gene	547950	548291	.	+	.	ID=GCA000160335_00489_gene;locus_tag=GCA000160335_00489
contig_1	Pyrodigal	CDS	547950	548291	.	+	0	ID=GCA000160335_00489;Name=UPF0741 protein USA300HOU_0586;locus_tag=GCA000160335_00489;product=UPF0741 protein USA300HOU_0586;Parent=GCA000160335_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000798965.1,SO:0001217,UniParc:UPI00003B1473,UniRef:UniRef100_Q6GJ75,UniRef:UniRef50_Q2G0I5,UniRef:UniRef90_Q2G0I5
contig_1	Pyrodigal	gene	548343	549665	.	-	.	ID=GCA000160335_00490_gene;locus_tag=GCA000160335_00490;gene=merA
contig_1	Pyrodigal	CDS	548343	549665	.	-	0	ID=GCA000160335_00490;Name=hypothiocyanous acid reductase MerA;locus_tag=GCA000160335_00490;product=hypothiocyanous acid reductase MerA;Dbxref=GO:0016668,GO:0050660;gene=merA;Parent=GCA000160335_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K21739,RefSeq:WP_000860607.1,SO:0001217,UniParc:UPI00003B1474,UniRef:UniRef100_A0A7Z7QX40,UniRef:UniRef50_A0A266CGC0,UniRef:UniRef90_A0A266CGC0
contig_1	Pyrodigal	gene	549652	550092	.	-	.	ID=GCA000160335_00491_gene;locus_tag=GCA000160335_00491;gene=hypR
contig_1	Pyrodigal	CDS	549652	550092	.	-	0	ID=GCA000160335_00491;Name=redox-sensitive transcriptional regulator HypR;locus_tag=GCA000160335_00491;product=redox-sensitive transcriptional regulator HypR;gene=hypR;Parent=GCA000160335_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_001047251.1,SO:0001217,UniParc:UPI00003B1475,UniRef:UniRef100_A0A7Z7QY11,UniRef:UniRef50_Q2G0I3,UniRef:UniRef90_Q2G0I3
contig_1	Pyrodigal	gene	550716	552110	.	+	.	ID=GCA000160335_00492_gene;locus_tag=GCA000160335_00492
contig_1	Pyrodigal	CDS	550716	552110	.	+	0	ID=GCA000160335_00492;Name=LXG domain-containing protein;locus_tag=GCA000160335_00492;product=LXG domain-containing protein;Parent=GCA000160335_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000020810.1,SO:0001217,UniParc:UPI00003B1476,UniRef:UniRef100_A0A0E1X843,UniRef:UniRef50_Q2G0I1,UniRef:UniRef90_A0A7U7EXC0
contig_1	Pyrodigal	gene	552111	552749	.	+	.	ID=GCA000160335_00493_gene;locus_tag=GCA000160335_00493
contig_1	Pyrodigal	CDS	552111	552749	.	+	0	ID=GCA000160335_00493;Name=DUF443 domain-containing protein;locus_tag=GCA000160335_00493;product=DUF443 domain-containing protein;Parent=GCA000160335_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD59D,UniRef:UniRef100_A0A7Z7W0W2,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0G9
contig_1	Pyrodigal	gene	552984	553211	.	+	.	ID=GCA000160335_00494_gene;locus_tag=GCA000160335_00494
contig_1	Pyrodigal	CDS	552984	553211	.	+	0	ID=GCA000160335_00494;Name=Membrane spanning protein;locus_tag=GCA000160335_00494;product=Membrane spanning protein;Parent=GCA000160335_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CA63D2,UniRef:UniRef100_A0A7Z7W166,UniRef:UniRef50_A0A7Z7W166,UniRef:UniRef90_A0A7Z7W166
contig_1	Pyrodigal	gene	553219	553605	.	+	.	ID=GCA000160335_00495_gene;locus_tag=GCA000160335_00495
contig_1	Pyrodigal	CDS	553219	553605	.	+	0	ID=GCA000160335_00495;Name=Membrane spanning protein;locus_tag=GCA000160335_00495;product=Membrane spanning protein;Parent=GCA000160335_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002B8E930,UniRef:UniRef100_A0A7Z7W0V1,UniRef:UniRef50_A0A0E1X808,UniRef:UniRef90_A0A7Z7W0V1
contig_1	Pyrodigal	gene	553745	554374	.	+	.	ID=GCA000160335_00496_gene;locus_tag=GCA000160335_00496
contig_1	Pyrodigal	CDS	553745	554374	.	+	0	ID=GCA000160335_00496;Name=DUF443 domain-containing protein;locus_tag=GCA000160335_00496;product=DUF443 domain-containing protein;Parent=GCA000160335_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882189.1,SO:0001217,UniParc:UPI00003B1479,UniRef:UniRef100_A0A7Z7W214,UniRef:UniRef50_A0A077UHM8,UniRef:UniRef90_A0A077UHM8
contig_1	Pyrodigal	gene	554827	555765	.	+	.	ID=GCA000160335_00497_gene;locus_tag=GCA000160335_00497;gene=pdxI
contig_1	Pyrodigal	CDS	554827	555765	.	+	0	ID=GCA000160335_00497;Name=NADP-dependent oxidoreductase domain-containing protein;locus_tag=GCA000160335_00497;product=NADP-dependent oxidoreductase domain-containing protein;gene=pdxI;Parent=GCA000160335_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,KEGG:K06607,RefSeq:WP_000808894.1,SO:0001217,UniParc:UPI00019CD59A,UniRef:UniRef100_A0A7Z7QX94,UniRef:UniRef50_Q2G0G6,UniRef:UniRef90_Q2G0G6;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	555975	556511	.	+	.	ID=GCA000160335_00498_gene;locus_tag=GCA000160335_00498;gene=wrbA
contig_1	Pyrodigal	CDS	555975	556511	.	+	0	ID=GCA000160335_00498;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000160335_00498;product=FMN-dependent NADPH-azoreductase;gene=wrbA;Parent=GCA000160335_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0655,RefSeq:WP_000633782.1,SO:0001217,UniParc:UPI00000547F2,UniRef:UniRef100_Q2G0G5,UniRef:UniRef50_A0A7U7PXP0,UniRef:UniRef90_A0A7U7PXP0
contig_1	Pyrodigal	gene	556680	557156	.	+	.	ID=GCA000160335_00499_gene;locus_tag=GCA000160335_00499;gene=rimI
contig_1	Pyrodigal	CDS	556680	557156	.	+	0	ID=GCA000160335_00499;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00499;product=N-acetyltransferase domain-containing protein;gene=rimI;Parent=GCA000160335_00499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000477504.1,SO:0001217,UniParc:UPI00000547F1,UniRef:UniRef100_Q2G0G4,UniRef:UniRef50_Q2G0G4,UniRef:UniRef90_Q2G0G4
contig_1	Pyrodigal	gene	557196	558491	.	+	.	ID=GCA000160335_00500_gene;locus_tag=GCA000160335_00500;gene=ydhJ
contig_1	Pyrodigal	CDS	557196	558491	.	+	0	ID=GCA000160335_00500;Name=HD domain-containing protein;locus_tag=GCA000160335_00500;product=HD domain-containing protein;gene=ydhJ;Parent=GCA000160335_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1078,COG:R,RefSeq:WP_000180233.1,SO:0001217,UniParc:UPI00003B147B,UniRef:UniRef100_A0A7Z7QX70,UniRef:UniRef50_P39651,UniRef:UniRef90_Q2G0G3
contig_1	Pyrodigal	gene	558534	559040	.	+	.	ID=GCA000160335_00501_gene;locus_tag=GCA000160335_00501
contig_1	Pyrodigal	CDS	558534	559040	.	+	0	ID=GCA000160335_00501;Name=Cytosolic protein;locus_tag=GCA000160335_00501;product=Cytosolic protein;Parent=GCA000160335_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9CCC,UniRef:UniRef100_A0A7Z7QX47,UniRef:UniRef50_A0A0U1MGP2,UniRef:UniRef90_A0A0U1MGP2
contig_1	Pyrodigal	gene	559539	560549	.	+	.	ID=GCA000160335_00502_gene;locus_tag=GCA000160335_00502;gene=adhP
contig_1	Pyrodigal	CDS	559539	560549	.	+	0	ID=GCA000160335_00502;Name=alcohol dehydrogenase AdhP;locus_tag=GCA000160335_00502;product=alcohol dehydrogenase AdhP;Dbxref=GO:0004022,GO:0008270;gene=adhP;Parent=GCA000160335_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1064,COG:G,KEGG:K13953,RefSeq:WP_001200748.1,SO:0001217,UniParc:UPI00000547EE,UniRef:UniRef100_Q2G0G1,UniRef:UniRef50_P20368,UniRef:UniRef90_Q2G0G1;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	560825	561241	.	+	.	ID=GCA000160335_00503_gene;locus_tag=GCA000160335_00503;gene=ywiB
contig_1	Pyrodigal	CDS	560825	561241	.	+	0	ID=GCA000160335_00503;Name=DUF1934 domain-containing protein;locus_tag=GCA000160335_00503;product=DUF1934 domain-containing protein;gene=ywiB;Parent=GCA000160335_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4506,COG:S,RefSeq:WP_000359082.1,SO:0001217,UniParc:UPI0001DA2467,UniRef:UniRef100_A0A7Z7QXQ6,UniRef:UniRef50_A0A0D0SIW2,UniRef:UniRef90_A0A077V1W0
contig_1	Pyrodigal	gene	561238	562899	.	+	.	ID=GCA000160335_00504_gene;locus_tag=GCA000160335_00504;gene=argS
contig_1	Pyrodigal	CDS	561238	562899	.	+	0	ID=GCA000160335_00504;Name=arginine--tRNA ligase;locus_tag=GCA000160335_00504;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA000160335_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_001021140.1,SO:0001217,UniParc:UPI00003B147D,UniRef:UniRef100_Q6GJ61,UniRef:UniRef50_P46906,UniRef:UniRef90_Q2G0F8;ec_number=6.1.1.19
contig_1	Pyrodigal	gene	563235	563870	.	+	.	ID=GCA000160335_00505_gene;locus_tag=GCA000160335_00505;gene=hP0602
contig_1	Pyrodigal	CDS	563235	563870	.	+	0	ID=GCA000160335_00505;Name=Endonuclease III;locus_tag=GCA000160335_00505;product=Endonuclease III;gene=hP0602;Parent=GCA000160335_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2231,COG:L,KEGG:K07457,RefSeq:WP_000901760.1,SO:0001217,UniParc:UPI00003B147E,UniRef:UniRef100_A0A7Z7QY19,UniRef:UniRef50_A0A0R2GA19,UniRef:UniRef90_A0A0U1MF38
contig_1	Pyrodigal	gene	564250	565137	.	+	.	ID=GCA000160335_00506_gene;locus_tag=GCA000160335_00506;gene=fepB
contig_1	Pyrodigal	CDS	564250	565137	.	+	0	ID=GCA000160335_00506;Name=ABC transporter substrate-binding protein;locus_tag=GCA000160335_00506;product=ABC transporter substrate-binding protein;gene=fepB;Parent=GCA000160335_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000749051.1,SO:0001217,UniParc:UPI00003B147F,UniRef:UniRef100_A0A7Z7QXQ4,UniRef:UniRef50_A0A380G1W9,UniRef:UniRef90_A0A6K1MU86
contig_1	Pyrodigal	gene	565251	566237	.	+	.	ID=GCA000160335_00507_gene;locus_tag=GCA000160335_00507;gene=fepD
contig_1	Pyrodigal	CDS	565251	566237	.	+	0	ID=GCA000160335_00507;Name=Transporter;locus_tag=GCA000160335_00507;product=Transporter;gene=fepD;Parent=GCA000160335_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniParc:UPI00019CD55E,UniRef:UniRef100_A0A166NJB2,UniRef:UniRef50_A0A1D4I031,UniRef:UniRef90_Q2G0F5
contig_1	Pyrodigal	gene	566292	567011	.	+	.	ID=GCA000160335_00508_gene;locus_tag=GCA000160335_00508;gene=yigB
contig_1	Pyrodigal	CDS	566292	567011	.	+	0	ID=GCA000160335_00508;Name=HAD family hydrolase;locus_tag=GCA000160335_00508;product=HAD family hydrolase;gene=yigB;Parent=GCA000160335_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_000365352.1,SO:0001217,UniParc:UPI00003B1481,UniRef:UniRef100_A0A7Z7W109,UniRef:UniRef50_A0A380G976,UniRef:UniRef90_A0A2K4AEL0
contig_1	Pyrodigal	gene	566995	567795	.	+	.	ID=GCA000160335_00509_gene;locus_tag=GCA000160335_00509;gene=menH
contig_1	Pyrodigal	CDS	566995	567795	.	+	0	ID=GCA000160335_00509;Name=3-oxoadipate enol-lactonase;locus_tag=GCA000160335_00509;product=3-oxoadipate enol-lactonase;gene=menH;Parent=GCA000160335_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000362975.1,SO:0001217,UniParc:UPI00003B1482,UniRef:UniRef100_A0A7Z7W172,UniRef:UniRef50_A0A0Y9U704,UniRef:UniRef90_A0A0Y9U704
contig_1	Pyrodigal	gene	567931	568437	.	+	.	ID=GCA000160335_00510_gene;locus_tag=GCA000160335_00510
contig_1	Pyrodigal	CDS	567931	568437	.	+	0	ID=GCA000160335_00510;Name=SA0570 family protein;locus_tag=GCA000160335_00510;product=SA0570 family protein;Parent=GCA000160335_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735554.1,SO:0001217,UniParc:UPI00003B1483,UniRef:UniRef100_A0A7Z7W0V6,UniRef:UniRef50_Q49VF9,UniRef:UniRef90_A0A2K4AED1
contig_1	Pyrodigal	gene	568599	569315	.	+	.	ID=GCA000160335_00511_gene;locus_tag=GCA000160335_00511
contig_1	Pyrodigal	CDS	568599	569315	.	+	0	ID=GCA000160335_00511;Name=DUF1129 domain-containing protein;locus_tag=GCA000160335_00511;product=DUF1129 domain-containing protein;Parent=GCA000160335_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001222137.1,SO:0001217,UniParc:UPI00003B1484,UniRef:UniRef100_A0A0E1X9M1,UniRef:UniRef50_Q5HRC1,UniRef:UniRef90_A0A6H4BUY2
contig_1	Pyrodigal	gene	569484	570272	.	+	.	ID=GCA000160335_00512_gene;locus_tag=GCA000160335_00512;gene=menH
contig_1	Pyrodigal	CDS	569484	570272	.	+	0	ID=GCA000160335_00512;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000160335_00512;product=AB hydrolase-1 domain-containing protein;gene=menH;Parent=GCA000160335_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_001045416.1,SO:0001217,UniParc:UPI00003B1485,UniRef:UniRef100_A0A0E1X825,UniRef:UniRef50_Q2G0F0,UniRef:UniRef90_Q2G0F0
contig_1	Pyrodigal	gene	570522	570896	.	-	.	ID=GCA000160335_00513_gene;locus_tag=GCA000160335_00513;gene=sarA
contig_1	Pyrodigal	CDS	570522	570896	.	-	0	ID=GCA000160335_00513;Name=global transcriptional regulator SarA;locus_tag=GCA000160335_00513;product=global transcriptional regulator SarA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0046872;gene=sarA;Parent=GCA000160335_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_001018677.1,SO:0001217,UniParc:UPI000003718E,UniRef:UniRef100_Q2G2U9,UniRef:UniRef50_Q2G2U9,UniRef:UniRef90_Q2G2U9
contig_1	Infernal	gene	571061	571256	.	-	.	ID=GCA000160335_00514_gene;locus_tag=GCA000160335_00514;gene=Teg49
contig_1	Infernal	ncRNA	571061	571256	7.8e-31	-	.	ID=GCA000160335_00514;Name=Teg49 sRNA;locus_tag=GCA000160335_00514;product=Teg49 sRNA;Dbxref=RFAM:RF02696;Parent=GCA000160335_00514_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02696
contig_1	Pyrodigal	gene	571844	572773	.	-	.	ID=GCA000160335_00515_gene;locus_tag=GCA000160335_00515;gene=ydcZ
contig_1	Pyrodigal	CDS	571844	572773	.	-	0	ID=GCA000160335_00515;Name=DMT family transporter;locus_tag=GCA000160335_00515;product=DMT family transporter;gene=ydcZ;Parent=GCA000160335_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3238,COG:S,KEGG:K09936,RefSeq:WP_001574632.1,SO:0001217,UniParc:UPI00003B1486,UniRef:UniRef100_A0A7Z7QX33,UniRef:UniRef50_Q2G2U7,UniRef:UniRef90_Q2G2U7
contig_1	Pyrodigal	gene	572966	573190	.	-	.	ID=GCA000160335_00516_gene;locus_tag=GCA000160335_00516
contig_1	Pyrodigal	CDS	572966	573190	.	-	0	ID=GCA000160335_00516;Name=DUF2922 domain-containing protein;locus_tag=GCA000160335_00516;product=DUF2922 domain-containing protein;Parent=GCA000160335_00516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169038.1,SO:0001217,UniParc:UPI00003B1487,UniRef:UniRef100_A0A0E1X7Z0,UniRef:UniRef50_Q2G2V1,UniRef:UniRef90_A0A0E1X7Z0
contig_1	Pyrodigal	gene	573207	573410	.	-	.	ID=GCA000160335_00517_gene;locus_tag=GCA000160335_00517
contig_1	Pyrodigal	CDS	573207	573410	.	-	0	ID=GCA000160335_00517;Name=DUF1659 domain-containing protein;locus_tag=GCA000160335_00517;product=DUF1659 domain-containing protein;Parent=GCA000160335_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000047745.1,SO:0001217,UniParc:UPI00003B1488,UniRef:UniRef100_A0A7Z7QX57,UniRef:UniRef50_G5JM78,UniRef:UniRef90_A0A0D1ICG2
contig_1	Pyrodigal	gene	573565	574125	.	+	.	ID=GCA000160335_00518_gene;locus_tag=GCA000160335_00518
contig_1	Pyrodigal	CDS	573565	574125	.	+	0	ID=GCA000160335_00518;Name=Phage integrase family protein;locus_tag=GCA000160335_00518;product=Phage integrase family protein;Parent=GCA000160335_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001044966.1,SO:0001217,UniParc:UPI00003B1489,UniRef:UniRef100_A0A166NJK6,UniRef:UniRef50_W8U156,UniRef:UniRef90_A0A166NJK6
contig_1	Pyrodigal	gene	574144	576546	.	+	.	ID=GCA000160335_00519_gene;locus_tag=GCA000160335_00519;gene=mnhA2
contig_1	Pyrodigal	CDS	574144	576546	.	+	0	ID=GCA000160335_00519;Name=Na+/H+ antiporter Mnh2 subunit A;locus_tag=GCA000160335_00519;product=Na+/H+ antiporter Mnh2 subunit A;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhA2;Parent=GCA000160335_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000060776,COG:COG2111,COG:P,RefSeq:WP_000060783.1,SO:0001217,UniParc:UPI00003B148A,UniRef:UniRef100_Q6GJ47,UniRef:UniRef50_Q2G2U8,UniRef:UniRef90_Q2G2U8
contig_1	Pyrodigal	gene	576533	576958	.	+	.	ID=GCA000160335_00520_gene;locus_tag=GCA000160335_00520;gene=mnhB2
contig_1	Pyrodigal	CDS	576533	576958	.	+	0	ID=GCA000160335_00520;Name=Na+/H+ antiporter Mnh2 subunit B;locus_tag=GCA000160335_00520;product=Na+/H+ antiporter Mnh2 subunit B;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhB2;Parent=GCA000160335_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000661906,RefSeq:WP_000661909.1,SO:0001217,UniParc:UPI00003B148B,UniRef:UniRef100_Q6GJ46,UniRef:UniRef50_Q49VH0,UniRef:UniRef90_Q6GJ46
contig_1	Pyrodigal	gene	576955	577299	.	+	.	ID=GCA000160335_00521_gene;locus_tag=GCA000160335_00521;gene=mnhC2
contig_1	Pyrodigal	CDS	576955	577299	.	+	0	ID=GCA000160335_00521;Name=Na+/H+ antiporter Mnh2 subunit C;locus_tag=GCA000160335_00521;product=Na+/H+ antiporter Mnh2 subunit C;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhC2;Parent=GCA000160335_00521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001048985,RefSeq:WP_001048982.1,SO:0001217,UniParc:UPI00003B148C,UniRef:UniRef100_Q6GJ45,UniRef:UniRef50_Q2G213,UniRef:UniRef90_Q6GJ45
contig_1	Pyrodigal	gene	577289	578785	.	+	.	ID=GCA000160335_00522_gene;locus_tag=GCA000160335_00522;gene=mnhD2
contig_1	Pyrodigal	CDS	577289	578785	.	+	0	ID=GCA000160335_00522;Name=Na+/H+ antiporter Mnh2 subunit D;locus_tag=GCA000160335_00522;product=Na+/H+ antiporter Mnh2 subunit D;Dbxref=GO:0005886,GO:0008137,GO:0015297,GO:0042773;gene=mnhD2;Parent=GCA000160335_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000950548,COG:COG0651,COG:CP,RefSeq:WP_000950557.1,SO:0001217,UniParc:UPI00019CD52D,UniRef:UniRef100_A0AB33V1C7,UniRef:UniRef50_Q0Q2J7,UniRef:UniRef90_Q0Q2J7
contig_1	Pyrodigal	gene	578786	579268	.	+	.	ID=GCA000160335_00523_gene;locus_tag=GCA000160335_00523;gene=mnhE2
contig_1	Pyrodigal	CDS	578786	579268	.	+	0	ID=GCA000160335_00523;Name=Na+/H+ antiporter Mnh2 subunit E;locus_tag=GCA000160335_00523;product=Na+/H+ antiporter Mnh2 subunit E;Dbxref=GO:0005886,GO:0008324,GO:0015297;gene=mnhE2;Parent=GCA000160335_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071973,COG:COG1863,COG:P,RefSeq:WP_001071971.1,SO:0001217,UniParc:UPI00000CAC4B,UniRef:UniRef100_Q99VY8,UniRef:UniRef50_Q2G210,UniRef:UniRef90_Q2G210
contig_1	Pyrodigal	gene	579265	579567	.	+	.	ID=GCA000160335_00524_gene;locus_tag=GCA000160335_00524;gene=mnhF2
contig_1	Pyrodigal	CDS	579265	579567	.	+	0	ID=GCA000160335_00524;Name=Na+/H+ antiporter Mnh2 subunit F;locus_tag=GCA000160335_00524;product=Na+/H+ antiporter Mnh2 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF2;Parent=GCA000160335_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000616642,COG:COG2212,COG:P,RefSeq:WP_000616643.1,SO:0001217,UniParc:UPI00003B148E,UniRef:UniRef100_Q6GJ42,UniRef:UniRef50_P0C948,UniRef:UniRef90_P0C948
contig_1	Pyrodigal	gene	579542	579979	.	+	.	ID=GCA000160335_00525_gene;locus_tag=GCA000160335_00525;gene=mnhG2
contig_1	Pyrodigal	CDS	579542	579979	.	+	0	ID=GCA000160335_00525;Name=Na+/H+ antiporter Mnh2 subunit G;locus_tag=GCA000160335_00525;product=Na+/H+ antiporter Mnh2 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG2;Parent=GCA000160335_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566533,COG:COG1320,COG:P,RefSeq:WP_000406616.1,SO:0001217,UniParc:UPI00019B23AE,UniRef:UniRef100_P0C947,UniRef:UniRef50_Q49VH5,UniRef:UniRef90_P0C947
contig_1	Pyrodigal	gene	580319	582361	.	+	.	ID=GCA000160335_00526_gene;locus_tag=GCA000160335_00526;gene=nhaP
contig_1	Pyrodigal	CDS	580319	582361	.	+	0	ID=GCA000160335_00526;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000160335_00526;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000160335_00526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,RefSeq:WP_000402172.1,SO:0001217,UniParc:UPI00000D9CD6,UniRef:UniRef100_A0A7Z7W222,UniRef:UniRef50_Q2G2E0,UniRef:UniRef90_Q2G2E0
contig_1	Pyrodigal	gene	582447	583595	.	-	.	ID=GCA000160335_00527_gene;locus_tag=GCA000160335_00527
contig_1	Pyrodigal	CDS	582447	583595	.	-	0	ID=GCA000160335_00527;Name=Membrane protein;locus_tag=GCA000160335_00527;product=Membrane protein;Parent=GCA000160335_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000065345.1,SO:0001217,UniParc:UPI00003B148F,UniRef:UniRef100_A0A7Z7QXB3,UniRef:UniRef50_A0A380E195,UniRef:UniRef90_A0A380E195
contig_1	Pyrodigal	gene	583599	584108	.	-	.	ID=GCA000160335_00528_gene;locus_tag=GCA000160335_00528
contig_1	Pyrodigal	CDS	583599	584108	.	-	0	ID=GCA000160335_00528;Name=HAD family hydrolase;locus_tag=GCA000160335_00528;product=HAD family hydrolase;Parent=GCA000160335_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4DC2,UniRef:UniRef100_A0A7Z7QXQ3,UniRef:UniRef50_K8EMR0,UniRef:UniRef90_A0A380E3C7
contig_1	Infernal	gene	584481	584920	.	-	.	ID=GCA000160335_00529_gene;locus_tag=GCA000160335_00529;gene=rsaC
contig_1	Infernal	ncRNA	584481	584920	6.9e-65	-	.	ID=GCA000160335_00529;Name=RNA Staph. aureus C;locus_tag=GCA000160335_00529;gene=rsaC;product=RNA Staph. aureus C;Dbxref=RFAM:RF01818;Parent=GCA000160335_00529_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01818
contig_1	Pyrodigal	gene	585246	586175	.	-	.	ID=GCA000160335_00530_gene;locus_tag=GCA000160335_00530;gene=mntC
contig_1	Pyrodigal	CDS	585246	586175	.	-	0	ID=GCA000160335_00530;Name=manganese ABC transporter substrate-binding lipoprotein MntC;locus_tag=GCA000160335_00530;product=manganese ABC transporter substrate-binding lipoprotein MntC;Dbxref=GO:0015410;gene=mntC;Parent=GCA000160335_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0803,COG:P,RefSeq:WP_000737654.1,SO:0001217,UniParc:UPI000005228B,UniRef:UniRef100_A0A7Z7QX41,UniRef:UniRef50_S2YNP1,UniRef:UniRef90_A0A7U7PYB7;ec_number=7.2.2.5
contig_1	Pyrodigal	gene	586172	587008	.	-	.	ID=GCA000160335_00531_gene;locus_tag=GCA000160335_00531;gene=znuB
contig_1	Pyrodigal	CDS	586172	587008	.	-	0	ID=GCA000160335_00531;Name=Metal ABC transporter permease;locus_tag=GCA000160335_00531;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000160335_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_000889252.1,SO:0001217,UniParc:UPI00000547D1,UniRef:UniRef100_Q2G2D9,UniRef:UniRef50_S2XTU7,UniRef:UniRef90_A0A7U7EXG0
contig_1	Pyrodigal	gene	587002	587745	.	-	.	ID=GCA000160335_00532_gene;locus_tag=GCA000160335_00532;gene=znuC
contig_1	Pyrodigal	CDS	587002	587745	.	-	0	ID=GCA000160335_00532;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_00532;product=ABC transporter domain-containing protein;gene=znuC;Parent=GCA000160335_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_000894458.1,SO:0001217,UniParc:UPI00003B1490,UniRef:UniRef100_A0A7Z7QX59,UniRef:UniRef50_A0A240BUN7,UniRef:UniRef90_Q2G2L2
contig_1	Pyrodigal	gene	587867	588511	.	+	.	ID=GCA000160335_00533_gene;locus_tag=GCA000160335_00533;gene=mntR
contig_1	Pyrodigal	CDS	587867	588511	.	+	0	ID=GCA000160335_00533;Name=Manganese transport regulator;locus_tag=GCA000160335_00533;product=Manganese transport regulator;gene=mntR;Parent=GCA000160335_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1321,COG:K,RefSeq:WP_000954654.1,SO:0001217,UniParc:UPI00000547CF,UniRef:UniRef100_Q2G2L0,UniRef:UniRef50_Q5HRA0,UniRef:UniRef90_A0A2K4AED5
contig_1	Pyrodigal	gene	588591	589343	.	-	.	ID=GCA000160335_00534_gene;locus_tag=GCA000160335_00534
contig_1	Pyrodigal	CDS	588591	589343	.	-	0	ID=GCA000160335_00534;Name=M50 family metallopeptidase;locus_tag=GCA000160335_00534;product=M50 family metallopeptidase;Parent=GCA000160335_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001108545.1,SO:0001217,UniParc:UPI00003B1491,UniRef:UniRef100_Q2G2K9,UniRef:UniRef50_Q2G2K9,UniRef:UniRef90_Q2G2K9
contig_1	Pyrodigal	gene	589579	590343	.	+	.	ID=GCA000160335_00535_gene;locus_tag=GCA000160335_00535;gene=tarA
contig_1	Pyrodigal	CDS	589579	590343	.	+	0	ID=GCA000160335_00535;Name=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;locus_tag=GCA000160335_00535;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;Dbxref=GO:0019350,GO:0047244,GO:0071555;gene=tarA;Parent=GCA000160335_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1922,COG:M,RefSeq:WP_000215382.1,SO:0001217,UniParc:UPI00003B1492,UniRef:UniRef100_Q6GJ34,UniRef:UniRef50_Q2G2L3,UniRef:UniRef90_Q2G2L3;ec_number=2.4.1.187
contig_1	Pyrodigal	gene	590403	591197	.	-	.	ID=GCA000160335_00536_gene;locus_tag=GCA000160335_00536;gene=tagH
contig_1	Pyrodigal	CDS	590403	591197	.	-	0	ID=GCA000160335_00536;Name=teichoic acids export ABC transporter ATP-binding subunit TagH;locus_tag=GCA000160335_00536;product=teichoic acids export ABC transporter ATP-binding subunit TagH;Dbxref=GO:0005524,GO:0005886,GO:0015438,GO:0016020,GO:0016887,GO:0140359;gene=tagH;Parent=GCA000160335_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_001103232.1,SO:0001217,UniParc:UPI00000D9CD8,UniRef:UniRef100_Q2G2L1,UniRef:UniRef50_Q2G2L1,UniRef:UniRef90_Q2G2L1;ec_number=7.5.2.4
contig_1	Pyrodigal	gene	591544	592356	.	+	.	ID=GCA000160335_00537_gene;locus_tag=GCA000160335_00537;gene=tagG
contig_1	Pyrodigal	CDS	591544	592356	.	+	0	ID=GCA000160335_00537;Name=teichoic acids export ABC transporter permease subunit TagG;locus_tag=GCA000160335_00537;product=teichoic acids export ABC transporter permease subunit TagG;gene=tagG;Parent=GCA000160335_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001273058,BlastRules:WP_003227928,COG:COG1682,COG:G,KEGG:K09692,RefSeq:WP_001273056.1,SO:0001217,UniParc:UPI0001D169BD,UniRef:UniRef100_A0A7U7EU92,UniRef:UniRef50_A0A7U7EU92,UniRef:UniRef90_A0A7U7EU92
contig_1	Pyrodigal	gene	592455	593558	.	+	.	ID=GCA000160335_00538_gene;locus_tag=GCA000160335_00538;gene=tarB
contig_1	Pyrodigal	CDS	592455	593558	.	+	0	ID=GCA000160335_00538;Name=teichoic acid glycerol-phosphate primase TarB;locus_tag=GCA000160335_00538;product=teichoic acid glycerol-phosphate primase TarB;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarB;Parent=GCA000160335_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_001101592.1,SO:0001217,UniParc:UPI0001B70036,UniRef:UniRef100_UPI0001B70036,UniRef:UniRef50_Q2G2X4,UniRef:UniRef90_Q2G2X4;ec_number=2.7.8.44
contig_1	Pyrodigal	gene	593555	594616	.	+	.	ID=GCA000160335_00539_gene;locus_tag=GCA000160335_00539;gene=tagX
contig_1	Pyrodigal	CDS	593555	594616	.	+	0	ID=GCA000160335_00539;Name=Putative glycosyltransferase TagX;locus_tag=GCA000160335_00539;product=Putative glycosyltransferase TagX;Dbxref=GO:0008360,GO:0016757,GO:0019350,GO:0071555;gene=tagX;Parent=GCA000160335_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1216,COG:G,RefSeq:WP_001241200.1,SO:0001217,UniParc:UPI00003B1496,UniRef:UniRef100_Q6GJ30,UniRef:UniRef50_O05154,UniRef:UniRef90_O05154;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	594679	595077	.	+	.	ID=GCA000160335_00540_gene;locus_tag=GCA000160335_00540;gene=tagD
contig_1	Pyrodigal	CDS	594679	595077	.	+	0	ID=GCA000160335_00540;Name=glycerol-3-phosphate cytidylyltransferase;locus_tag=GCA000160335_00540;product=glycerol-3-phosphate cytidylyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0046872,GO:0047348,GO:0071555;gene=tagD;Parent=GCA000160335_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0615,COG:M,RefSeq:WP_000832260.1,SO:0001217,UniParc:UPI00000547C8,UniRef:UniRef100_Q2G2X2,UniRef:UniRef50_Q2G2X2,UniRef:UniRef90_Q2G2X2;ec_number=2.7.7.39
contig_1	Pyrodigal	gene	595194	596489	.	-	.	ID=GCA000160335_00541_gene;locus_tag=GCA000160335_00541;gene=pbp4
contig_1	Pyrodigal	CDS	595194	596489	.	-	0	ID=GCA000160335_00541;Name=penicillin-binding protein PBP4;locus_tag=GCA000160335_00541;product=penicillin-binding protein PBP4;gene=pbp4;Parent=GCA000160335_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,RefSeq:WP_000793055.1,SO:0001217,UniParc:UPI0001B70061,UniRef:UniRef100_A0A7Z7W0W3,UniRef:UniRef50_A0A218M1Q9,UniRef:UniRef90_A0A218M1Q9
contig_1	Pyrodigal	gene	596910	598637	.	+	.	ID=GCA000160335_00542_gene;locus_tag=GCA000160335_00542;gene=mdlB
contig_1	Pyrodigal	CDS	596910	598637	.	+	0	ID=GCA000160335_00542;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00542;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000160335_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000817954.1,SO:0001217,UniParc:UPI00000547C5,UniRef:UniRef100_Q2G2E5,UniRef:UniRef50_Q2G2E5,UniRef:UniRef90_Q2G2E5
contig_1	Pyrodigal	gene	598996	600225	.	+	.	ID=GCA000160335_00543_gene;locus_tag=GCA000160335_00543;gene=nupC
contig_1	Pyrodigal	CDS	598996	600225	.	+	0	ID=GCA000160335_00543;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000160335_00543;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000160335_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K16323,RefSeq:WP_000479281.1,SO:0001217,UniParc:UPI00019CD4EE,UniRef:UniRef100_A0A7Z7QXC2,UniRef:UniRef50_Q2G2E4,UniRef:UniRef90_Q2G2E4
contig_1	Infernal	gene	600375	600551	.	-	.	ID=GCA000160335_00544_gene;locus_tag=GCA000160335_00544;gene=rsaD
contig_1	Infernal	ncRNA	600375	600551	7.6e-29	-	.	ID=GCA000160335_00544;Name=RNA Staph. aureus D;locus_tag=GCA000160335_00544;gene=rsaD;product=RNA Staph. aureus D;Dbxref=RFAM:RF01819;Parent=GCA000160335_00544_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01819
contig_1	Pyrodigal	gene	600750	601583	.	+	.	ID=GCA000160335_00545_gene;locus_tag=GCA000160335_00545;gene=yitT
contig_1	Pyrodigal	CDS	600750	601583	.	+	0	ID=GCA000160335_00545;Name=DUF2179 domain-containing protein;locus_tag=GCA000160335_00545;product=DUF2179 domain-containing protein;gene=yitT;Parent=GCA000160335_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1284,COG:S,RefSeq:WP_001044662.1,SO:0001217,UniParc:UPI00003B1A72,UniRef:UniRef100_Q2G2E2,UniRef:UniRef50_Q2G2E2,UniRef:UniRef90_Q2G2E2
contig_1	Pyrodigal	gene	601864	602661	.	+	.	ID=GCA000160335_00546_gene;locus_tag=GCA000160335_00546;gene=fepC
contig_1	Pyrodigal	CDS	601864	602661	.	+	0	ID=GCA000160335_00546;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00546;product=ABC transporter ATP-binding protein;gene=fepC;Parent=GCA000160335_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_001080809.1,SO:0001217,UniParc:UPI00000549B6,UniRef:UniRef100_Q2G1Z3,UniRef:UniRef50_R2PWZ5,UniRef:UniRef90_A0A2K4AE83
contig_1	Pyrodigal	gene	602697	603701	.	+	.	ID=GCA000160335_00547_gene;locus_tag=GCA000160335_00547;gene=fepD
contig_1	Pyrodigal	CDS	602697	603701	.	+	0	ID=GCA000160335_00547;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000160335_00547;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000160335_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000184732.1,SO:0001217,UniParc:UPI00003B149B,UniRef:UniRef100_A0A0E1XA68,UniRef:UniRef50_B9E9G3,UniRef:UniRef90_A0A7U7JT50
contig_1	Pyrodigal	gene	603698	604714	.	+	.	ID=GCA000160335_00548_gene;locus_tag=GCA000160335_00548;gene=fepD
contig_1	Pyrodigal	CDS	603698	604714	.	+	0	ID=GCA000160335_00548;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000160335_00548;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000160335_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000625890.1,SO:0001217,UniParc:UPI00003B149C,UniRef:UniRef100_A0A7Z7QX71,UniRef:UniRef50_B9DKA5,UniRef:UniRef90_A0A0U1MFB2
contig_1	Pyrodigal	gene	604948	605916	.	+	.	ID=GCA000160335_00549_gene;locus_tag=GCA000160335_00549;gene=dhaK
contig_1	Pyrodigal	CDS	604948	605916	.	+	0	ID=GCA000160335_00549;Name=dihydroxyacetone kinase subunit DhaK;locus_tag=GCA000160335_00549;product=dihydroxyacetone kinase subunit DhaK;Dbxref=GO:0004371,GO:0006071;gene=dhaK;Parent=GCA000160335_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000976253.1,SO:0001217,UniParc:UPI00019F4DA2,UniRef:UniRef100_A0A7Z7QXE9,UniRef:UniRef50_A0A0D6XPW7,UniRef:UniRef90_A0A380E3E7;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	605958	606542	.	+	.	ID=GCA000160335_00550_gene;locus_tag=GCA000160335_00550;gene=dhaL
contig_1	Pyrodigal	CDS	605958	606542	.	+	0	ID=GCA000160335_00550;Name=dihydroxyacetone kinase subunit DhaL;locus_tag=GCA000160335_00550;product=dihydroxyacetone kinase subunit DhaL;Dbxref=GO:0006071,GO:0047324;gene=dhaL;Parent=GCA000160335_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000867193.1,SO:0001217,UniParc:UPI00003B149E,UniRef:UniRef100_A0A0E1X7Z4,UniRef:UniRef50_A0A380G5G0,UniRef:UniRef90_A0AAE8PB82;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	606535	606897	.	+	.	ID=GCA000160335_00551_gene;locus_tag=GCA000160335_00551;gene=dhaM
contig_1	Pyrodigal	CDS	606535	606897	.	+	0	ID=GCA000160335_00551;Name=phosphoenolpyruvate--glycerone phosphotransferase;locus_tag=GCA000160335_00551;product=phosphoenolpyruvate--glycerone phosphotransferase;gene=dhaM;Parent=GCA000160335_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3412,COG:T,RefSeq:WP_001124164.1,SO:0001217,UniParc:UPI00003B149F,UniRef:UniRef100_A0A7Z7QX72,UniRef:UniRef50_A0A2T4MIK7,UniRef:UniRef90_A0A0U1MGK2
contig_1	Pyrodigal	gene	607013	607510	.	+	.	ID=GCA000160335_00552_gene;locus_tag=GCA000160335_00552
contig_1	Pyrodigal	CDS	607013	607510	.	+	0	ID=GCA000160335_00552;Name=Immunity protein 30 domain-containing protein;locus_tag=GCA000160335_00552;product=Immunity protein 30 domain-containing protein;Parent=GCA000160335_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001164085.1,SO:0001217,UniParc:UPI00000549AF,UniRef:UniRef100_Q2G0E7,UniRef:UniRef50_S2YNQ8,UniRef:UniRef90_A0A9X5XNP2
contig_1	Pyrodigal	gene	607966	609033	.	+	.	ID=GCA000160335_00553_gene;locus_tag=GCA000160335_00553;gene=ykvI
contig_1	Pyrodigal	CDS	607966	609033	.	+	0	ID=GCA000160335_00553;Name=Branched-chain amino acid transport system II carrier protein;locus_tag=GCA000160335_00553;product=Branched-chain amino acid transport system II carrier protein;gene=ykvI;Parent=GCA000160335_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_000980141.1,SO:0001217,UniParc:UPI00019F4DA1,UniRef:UniRef100_A0A7Z7QXU0,UniRef:UniRef50_K9AMJ6,UniRef:UniRef90_Q2G0E6
contig_1	Pyrodigal	gene	609184	610227	.	+	.	ID=GCA000160335_00554_gene;locus_tag=GCA000160335_00554;gene=aes
contig_1	Pyrodigal	CDS	609184	610227	.	+	0	ID=GCA000160335_00554;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000160335_00554;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000160335_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001030763.1,SO:0001217,UniParc:UPI00003B14A1,UniRef:UniRef100_A0A168JT00,UniRef:UniRef50_A0A240BV45,UniRef:UniRef90_Q2G0E5
contig_1	Pyrodigal	gene	610555	610983	.	+	.	ID=GCA000160335_00555_gene;locus_tag=GCA000160335_00555
contig_1	Pyrodigal	CDS	610555	610983	.	+	0	ID=GCA000160335_00555;Name=Cytosolic protein;locus_tag=GCA000160335_00555;product=Cytosolic protein;Parent=GCA000160335_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000198497.1,SO:0001217,UniParc:UPI0001B70243,UniRef:UniRef100_UPI0001B70243,UniRef:UniRef50_A0A7U7JT75,UniRef:UniRef90_Q2G0E3
contig_1	Pyrodigal	gene	611181	611687	.	-	.	ID=GCA000160335_00556_gene;locus_tag=GCA000160335_00556;gene=rimL
contig_1	Pyrodigal	CDS	611181	611687	.	-	0	ID=GCA000160335_00556;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00556;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000160335_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000940129.1,SO:0001217,UniParc:UPI00000D7737,UniRef:UniRef100_A0A7Z7W0X0,UniRef:UniRef50_Q2G0E2,UniRef:UniRef90_Q2G0E2
contig_1	Pyrodigal	gene	611800	612723	.	+	.	ID=GCA000160335_00557_gene;locus_tag=GCA000160335_00557;gene=graX
contig_1	Pyrodigal	CDS	611800	612723	.	+	0	ID=GCA000160335_00557;Name=auxiliary protein GraX/ApsX;locus_tag=GCA000160335_00557;product=auxiliary protein GraX/ApsX;gene=graX;Parent=GCA000160335_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000802946,BlastRules:WP_001832033,COG:COG0451,COG:M,RefSeq:WP_000802949.1,SO:0001217,UniParc:UPI00003B14A3,UniRef:UniRef100_A0A7Z7W234,UniRef:UniRef50_Q2G0E1,UniRef:UniRef90_Q2G0E1
contig_1	Pyrodigal	gene	612739	613413	.	+	.	ID=GCA000160335_00558_gene;locus_tag=GCA000160335_00558;gene=graR
contig_1	Pyrodigal	CDS	612739	613413	.	+	0	ID=GCA000160335_00558;Name=response regulator transcription factor GraR/ApsR;locus_tag=GCA000160335_00558;product=response regulator transcription factor GraR/ApsR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993,GO:0046677;gene=graR;Parent=GCA000160335_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001166505,BlastRules:WP_001832046,COG:COG0745,COG:TK,KEGG:K19078,RefSeq:WP_001166499.1,SO:0001217,UniParc:UPI00003B14A4,UniRef:UniRef100_Q6GJ11,UniRef:UniRef50_Q2G0E0,UniRef:UniRef90_Q2G0E0
contig_1	Pyrodigal	gene	613406	614446	.	+	.	ID=GCA000160335_00559_gene;locus_tag=GCA000160335_00559;gene=graS
contig_1	Pyrodigal	CDS	613406	614446	.	+	0	ID=GCA000160335_00559;Name=histidine kinase GraS/ApsS;locus_tag=GCA000160335_00559;product=histidine kinase GraS/ApsS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036,GO:0046677;gene=graS;Parent=GCA000160335_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001061252,BlastRules:WP_002468453,COG:COG0642,COG:T,RefSeq:WP_001061270.1,SO:0001217,UniParc:UPI00003B14A5,UniRef:UniRef100_Q6GJ10,UniRef:UniRef50_Q8NXR5,UniRef:UniRef90_Q8NXR5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	614593	615354	.	+	.	ID=GCA000160335_00560_gene;locus_tag=GCA000160335_00560;gene=vraF
contig_1	Pyrodigal	CDS	614593	615354	.	+	0	ID=GCA000160335_00560;Name=ABC transporter ATP-binding protein VraF;locus_tag=GCA000160335_00560;product=ABC transporter ATP-binding protein VraF;gene=vraF;Parent=GCA000160335_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001637630,BlastRules:WP_020363729,COG:COG1136,COG:M,KEGG:K19079,RefSeq:WP_000153733.1,SO:0001217,UniParc:UPI00003B14A6,UniRef:UniRef100_A0A7Z7QX56,UniRef:UniRef50_O34697,UniRef:UniRef90_Q2G0D8
contig_1	Pyrodigal	gene	615344	617233	.	+	.	ID=GCA000160335_00561_gene;locus_tag=GCA000160335_00561
contig_1	Pyrodigal	CDS	615344	617233	.	+	0	ID=GCA000160335_00561;Name=ABC transporter permease;locus_tag=GCA000160335_00561;product=ABC transporter permease;Parent=GCA000160335_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19080,RefSeq:WP_000009408.1,SO:0001217,UniParc:UPI00019F4DA0,UniRef:UniRef100_A0A2W3AHG8,UniRef:UniRef50_Q4L484,UniRef:UniRef90_A0A0U1MFF4
contig_1	Pyrodigal	gene	617849	618466	.	+	.	ID=GCA000160335_00562_gene;locus_tag=GCA000160335_00562;gene=ykaA
contig_1	Pyrodigal	CDS	617849	618466	.	+	0	ID=GCA000160335_00562;Name=DUF47 domain-containing protein;locus_tag=GCA000160335_00562;product=DUF47 domain-containing protein;gene=ykaA;Parent=GCA000160335_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1392,COG:P,RefSeq:WP_000491755.1,SO:0001217,UniParc:UPI00000549A3,UniRef:UniRef100_Q2G0D6,UniRef:UniRef50_A0A919WW74,UniRef:UniRef90_Q2G0D6
contig_1	Pyrodigal	gene	618482	619489	.	+	.	ID=GCA000160335_00563_gene;locus_tag=GCA000160335_00563;gene=pitA
contig_1	Pyrodigal	CDS	618482	619489	.	+	0	ID=GCA000160335_00563;Name=Inorganic phosphate transporter;locus_tag=GCA000160335_00563;product=Inorganic phosphate transporter;gene=pitA;Parent=GCA000160335_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,KEGG:K03306,RefSeq:WP_000120368.1,SO:0001217,UniParc:UPI00000549A2,UniRef:UniRef100_Q2G0D5,UniRef:UniRef50_Q2G0D5,UniRef:UniRef90_Q2G0D5
contig_1	Pyrodigal	gene	620076	620873	.	-	.	ID=GCA000160335_00564_gene;locus_tag=GCA000160335_00564
contig_1	Pyrodigal	CDS	620076	620873	.	-	0	ID=GCA000160335_00564;Name=putative autolysin SsaALP;locus_tag=GCA000160335_00564;product=putative autolysin SsaALP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000160335_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000731642.1,SO:0001217,UniParc:UPI00003B14A8,UniRef:UniRef100_A0A7Z7QX86,UniRef:UniRef50_Q2G0D4,UniRef:UniRef90_Q2G0D4;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	621234	621878	.	+	.	ID=GCA000160335_00565_gene;locus_tag=GCA000160335_00565;gene=ybhL
contig_1	Pyrodigal	CDS	621234	621878	.	+	0	ID=GCA000160335_00565;Name=Transporter;locus_tag=GCA000160335_00565;product=Transporter;gene=ybhL;Parent=GCA000160335_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_000081597.1,SO:0001217,UniParc:UPI00003B14A9,UniRef:UniRef100_A0A7Z7QY63,UniRef:UniRef50_Q2G0D3,UniRef:UniRef90_Q2G0D3
contig_1	Pyrodigal	gene	622560	624710	.	+	.	ID=GCA000160335_00566_gene;locus_tag=GCA000160335_00566;gene=araC
contig_1	Pyrodigal	CDS	622560	624710	.	+	0	ID=GCA000160335_00566;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000160335_00566;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000160335_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_001129756.1,SO:0001217,UniParc:UPI00019F4D9E,UniRef:UniRef100_UPI00019F4D9E,UniRef:UniRef50_Q2G0D2,UniRef:UniRef90_Q2G0D2
contig_1	Pyrodigal	gene	624790	625215	.	+	.	ID=GCA000160335_00567_gene;locus_tag=GCA000160335_00567;gene=sarX
contig_1	Pyrodigal	CDS	624790	625215	.	+	0	ID=GCA000160335_00567;Name=HTH-type transcriptional regulator SarX;locus_tag=GCA000160335_00567;product=HTH-type transcriptional regulator SarX;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarX;Parent=GCA000160335_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B14AA,UniRef:UniRef100_A0A0E1X7S0,UniRef:UniRef50_Q2G0D1,UniRef:UniRef90_Q2G0D1
contig_1	Pyrodigal	gene	625405	626121	.	+	.	ID=GCA000160335_00568_gene;locus_tag=GCA000160335_00568;gene=tACO1
contig_1	Pyrodigal	CDS	625405	626121	.	+	0	ID=GCA000160335_00568;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000160335_00568;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA000160335_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_000532963.1,SO:0001217,UniParc:UPI0001B70064,UniRef:UniRef100_UPI0001B70064,UniRef:UniRef50_P0A8A2,UniRef:UniRef90_Q2G0D0
contig_1	Pyrodigal	gene	626121	626594	.	+	.	ID=GCA000160335_00569_gene;locus_tag=GCA000160335_00569;gene=cFF1
contig_1	Pyrodigal	CDS	626121	626594	.	+	0	ID=GCA000160335_00569;Name=DUF985 domain-containing protein;locus_tag=GCA000160335_00569;product=DUF985 domain-containing protein;gene=cFF1;Parent=GCA000160335_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3542,COG:R,KEGG:K09705,RefSeq:WP_000833480.1,SO:0001217,UniParc:UPI00003B14AB,UniRef:UniRef100_A0A7Z7W191,UniRef:UniRef50_Q2G0C9,UniRef:UniRef90_Q2G0C9
contig_1	Pyrodigal	gene	626947	627591	.	+	.	ID=GCA000160335_00570_gene;locus_tag=GCA000160335_00570
contig_1	Pyrodigal	CDS	626947	627591	.	+	0	ID=GCA000160335_00570;Name=DUF402 domain-containing protein;locus_tag=GCA000160335_00570;product=DUF402 domain-containing protein;Parent=GCA000160335_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2306,COG:R,KEGG:K09145,RefSeq:WP_000865619.1,SO:0001217,UniParc:UPI00003B14AC,UniRef:UniRef100_A0A7Z7W0X4,UniRef:UniRef50_Q49VL4,UniRef:UniRef90_A0A7U7JT79
contig_1	Pyrodigal	gene	627709	628575	.	+	.	ID=GCA000160335_00571_gene;locus_tag=GCA000160335_00571;gene=lysR
contig_1	Pyrodigal	CDS	627709	628575	.	+	0	ID=GCA000160335_00571;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000160335_00571;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000160335_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000687413.1,SO:0001217,UniParc:UPI00003B14AD,UniRef:UniRef100_A0A7Z7W239,UniRef:UniRef50_Q2G0C6,UniRef:UniRef90_Q2G0C6
contig_1	Pyrodigal	gene	628793	630085	.	+	.	ID=GCA000160335_00572_gene;locus_tag=GCA000160335_00572
contig_1	Pyrodigal	CDS	628793	630085	.	+	0	ID=GCA000160335_00572;Name=Major facilitator superfamily protein superfamily;locus_tag=GCA000160335_00572;product=Major facilitator superfamily protein superfamily;Parent=GCA000160335_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03291,SO:0001217,UniParc:UPI00021AE3C1,UniRef:UniRef100_A0A2X2JL33,UniRef:UniRef50_Q2G0C4,UniRef:UniRef90_Q2G0C4
contig_1	Pyrodigal	gene	630082	630549	.	+	.	ID=GCA000160335_00573_gene;locus_tag=GCA000160335_00573
contig_1	Pyrodigal	CDS	630082	630549	.	+	0	ID=GCA000160335_00573;Name=DUF456 domain-containing protein;locus_tag=GCA000160335_00573;product=DUF456 domain-containing protein;Parent=GCA000160335_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09793,RefSeq:WP_000158017.1,SO:0001217,UniParc:UPI0001CF72B2,UniRef:UniRef100_UPI0001CF72B2,UniRef:UniRef50_Q49VL7,UniRef:UniRef90_A0A380E3B9
contig_1	Infernal	gene	630577	630802	.	-	.	ID=GCA000160335_00574_gene;locus_tag=GCA000160335_00574;gene=tsr24
contig_1	Infernal	ncRNA	630577	630802	1.1e-28	-	.	ID=GCA000160335_00574;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_00574;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_00574_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	630792	632438	.	+	.	ID=GCA000160335_00575_gene;locus_tag=GCA000160335_00575;gene=tnp
contig_1	Pyrodigal	CDS	630792	632438	.	+	0	ID=GCA000160335_00575;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_00575;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_020967614.1,SO:0001217,UniParc:UPI00038DC9A8,UniRef:UniRef100_A0A7Z7QX66,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	632593	633282	.	-	.	ID=GCA000160335_00576_gene;locus_tag=GCA000160335_00576
contig_1	Pyrodigal	CDS	632593	633282	.	-	0	ID=GCA000160335_00576;Name=DUF1129 domain-containing protein;locus_tag=GCA000160335_00576;product=DUF1129 domain-containing protein;Parent=GCA000160335_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4858,COG:S,RefSeq:WP_000842865.1,SO:0001217,UniParc:UPI00003B14C4,UniRef:UniRef100_A0A7Z7QXB8,UniRef:UniRef50_Q2G0C2,UniRef:UniRef90_Q2G0C2
contig_1	Pyrodigal	gene	633409	633852	.	+	.	ID=GCA000160335_00577_gene;locus_tag=GCA000160335_00577
contig_1	Pyrodigal	CDS	633409	633852	.	+	0	ID=GCA000160335_00577;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00577;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001259671.1,SO:0001217,UniParc:UPI0001B70066,UniRef:UniRef100_UPI0001B70066,UniRef:UniRef50_Q2G0C1,UniRef:UniRef90_Q2G0C1
contig_1	Pyrodigal	gene	633919	634308	.	+	.	ID=GCA000160335_00578_gene;locus_tag=GCA000160335_00578
contig_1	Pyrodigal	CDS	633919	634308	.	+	0	ID=GCA000160335_00578;Name=SA0632 family lipoprotein;locus_tag=GCA000160335_00578;product=SA0632 family lipoprotein;Parent=GCA000160335_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733427.1,SO:0001217,UniParc:UPI00003B14C6,UniRef:UniRef100_A0A7Z7QXI3,UniRef:UniRef50_G5JIS8,UniRef:UniRef90_A0A6A9GRM5
contig_1	Pyrodigal	gene	634446	634745	.	+	.	ID=GCA000160335_00579_gene;locus_tag=GCA000160335_00579
contig_1	Pyrodigal	CDS	634446	634745	.	+	0	ID=GCA000160335_00579;Name=Phage protein;locus_tag=GCA000160335_00579;product=Phage protein;Parent=GCA000160335_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000545117.1,SO:0001217,UniParc:UPI0001B70067,UniRef:UniRef100_UPI0001B70067,UniRef:UniRef50_A0A240BWH3,UniRef:UniRef90_Q2G0B9
contig_1	Pyrodigal	gene	634825	635367	.	+	.	ID=GCA000160335_00580_gene;locus_tag=GCA000160335_00580;gene=rimL
contig_1	Pyrodigal	CDS	634825	635367	.	+	0	ID=GCA000160335_00580;Name=Acetyltransferase%2C GNAT family;locus_tag=GCA000160335_00580;product=Acetyltransferase%2C GNAT family;gene=rimL;Parent=GCA000160335_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000638614.1,SO:0001217,UniParc:UPI00003B14C8,UniRef:UniRef100_A0A7Z7QX92,UniRef:UniRef50_A0A0U1MFJ7,UniRef:UniRef90_A0A0U1MFJ7
contig_1	Pyrodigal	gene	635462	636028	.	-	.	ID=GCA000160335_00581_gene;locus_tag=GCA000160335_00581;gene=ppnN
contig_1	Pyrodigal	CDS	635462	636028	.	-	0	ID=GCA000160335_00581;Name=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;locus_tag=GCA000160335_00581;product=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;gene=ppnN;Parent=GCA000160335_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1611,COG:F,KEGG:K22522,RefSeq:WP_000820892.1,SO:0001217,UniParc:UPI00000548EB,UniRef:UniRef100_Q2G0B7,UniRef:UniRef50_A0A9X5XNB6,UniRef:UniRef90_A0A0U1MFK8;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	636030	636488	.	-	.	ID=GCA000160335_00582_gene;locus_tag=GCA000160335_00582;gene=yaiI
contig_1	Pyrodigal	CDS	636030	636488	.	-	0	ID=GCA000160335_00582;Name=YaiI/YqxD family protein;locus_tag=GCA000160335_00582;product=YaiI/YqxD family protein;gene=yaiI;Parent=GCA000160335_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1671,COG:S,KEGG:K09768,RefSeq:WP_000148818.1,SO:0001217,UniParc:UPI0001B70068,UniRef:UniRef100_UPI0001B70068,UniRef:UniRef50_Q2G0B6,UniRef:UniRef90_Q2G0B6
contig_1	Pyrodigal	gene	636491	637174	.	-	.	ID=GCA000160335_00583_gene;locus_tag=GCA000160335_00583
contig_1	Pyrodigal	CDS	636491	637174	.	-	0	ID=GCA000160335_00583;Name=hypothetical protein;locus_tag=GCA000160335_00583;product=hypothetical protein;Parent=GCA000160335_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000358501.1,SO:0001217,UniParc:UPI00003B14CA,UniRef:UniRef100_A0A0E1X7T8,UniRef:UniRef50_A0A0E1X7T8,UniRef:UniRef90_A0A0E1X7T8
contig_1	Pyrodigal	gene	637346	638221	.	-	.	ID=GCA000160335_00584_gene;locus_tag=GCA000160335_00584;gene=uppP
contig_1	Pyrodigal	CDS	637346	638221	.	-	0	ID=GCA000160335_00584;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000160335_00584;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555;gene=uppP;Parent=GCA000160335_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1968,COG:I,RefSeq:WP_000469883.1,SO:0001217,UniParc:UPI00003B14CB,UniRef:UniRef100_Q6GIV9,UniRef:UniRef50_P94507,UniRef:UniRef90_Q9KIN5;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	638440	640071	.	+	.	ID=GCA000160335_00585_gene;locus_tag=GCA000160335_00585;gene=cydD
contig_1	Pyrodigal	CDS	638440	640071	.	+	0	ID=GCA000160335_00585;Name=ABC transporter ATP-binding protein/permease;locus_tag=GCA000160335_00585;product=ABC transporter ATP-binding protein/permease;gene=cydD;Parent=GCA000160335_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_000737141.1,SO:0001217,UniParc:UPI0001B70085,UniRef:UniRef100_UPI0001B70085,UniRef:UniRef50_A0A0H2VEV6,UniRef:UniRef90_Q2G0B3
contig_1	Pyrodigal	gene	640068	641741	.	+	.	ID=GCA000160335_00586_gene;locus_tag=GCA000160335_00586;gene=cydC
contig_1	Pyrodigal	CDS	640068	641741	.	+	0	ID=GCA000160335_00586;Name=Amino acid ABC transporter ATP-binding/permease protein;locus_tag=GCA000160335_00586;product=Amino acid ABC transporter ATP-binding/permease protein;gene=cydC;Parent=GCA000160335_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_000857616.1,SO:0001217,UniParc:UPI00003B14CD,UniRef:UniRef100_A0A7Z7W0X7,UniRef:UniRef50_A0A4U9TIQ0,UniRef:UniRef90_Q2G0B2
contig_1	Pyrodigal	gene	641868	642311	.	-	.	ID=GCA000160335_00587_gene;locus_tag=GCA000160335_00587;gene=mgrA
contig_1	Pyrodigal	CDS	641868	642311	.	-	0	ID=GCA000160335_00587;Name=HTH-type transcriptional regulator MgrA;locus_tag=GCA000160335_00587;product=HTH-type transcriptional regulator MgrA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=mgrA;Parent=GCA000160335_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001283444,COG:COG1846,COG:K,KEGG:K18906,RefSeq:WP_001283444.1,SO:0001217,UniParc:UPI00000548AE,UniRef:UniRef100_Q2G0B1,UniRef:UniRef50_Q2G0B1,UniRef:UniRef90_Q2G0B1
contig_1	Pyrodigal	gene	642538	643464	.	+	.	ID=GCA000160335_00588_gene;locus_tag=GCA000160335_00588;gene=yejR
contig_1	Pyrodigal	CDS	642538	643464	.	+	0	ID=GCA000160335_00588;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000160335_00588;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000160335_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000794424.1,SO:0001217,UniParc:UPI00003B14CE,UniRef:UniRef100_A0A7Z7QXE3,UniRef:UniRef50_G5JL55,UniRef:UniRef90_Q2G0B0
contig_1	Pyrodigal	gene	643567	644475	.	+	.	ID=GCA000160335_00589_gene;locus_tag=GCA000160335_00589;gene=ydhF
contig_1	Pyrodigal	CDS	643567	644475	.	+	0	ID=GCA000160335_00589;Name=NADP-dependent oxidoreductase domain-containing protein;locus_tag=GCA000160335_00589;product=NADP-dependent oxidoreductase domain-containing protein;gene=ydhF;Parent=GCA000160335_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4989,COG:R,RefSeq:WP_000435104.1,SO:0001217,UniParc:UPI00019CD7C0,UniRef:UniRef100_A0A7Z7QXV1,UniRef:UniRef50_Q2G0A9,UniRef:UniRef90_Q2G0A9
contig_1	Pyrodigal	gene	644510	644797	.	+	.	ID=GCA000160335_00590_gene;locus_tag=GCA000160335_00590
contig_1	Pyrodigal	CDS	644510	644797	.	+	0	ID=GCA000160335_00590;Name=Membrane protein;locus_tag=GCA000160335_00590;product=Membrane protein;Parent=GCA000160335_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000180420.1,SO:0001217,UniParc:UPI00003B14D0,UniRef:UniRef100_A0A7Z7QX73,UniRef:UniRef50_Q2G0A8,UniRef:UniRef90_Q2G0A8
contig_1	Pyrodigal	gene	645080	646633	.	+	.	ID=GCA000160335_00591_gene;locus_tag=GCA000160335_00591;gene=citT
contig_1	Pyrodigal	CDS	645080	646633	.	+	0	ID=GCA000160335_00591;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000160335_00591;product=Sodium-dependent dicarboxylate transporter SdcS;gene=citT;Parent=GCA000160335_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_000005632.1,SO:0001217,UniParc:UPI00003B14D1,UniRef:UniRef100_A0A0E1X7M3,UniRef:UniRef50_M7PBF6,UniRef:UniRef90_A0A9N8IKH9
contig_1	Pyrodigal	gene	646719	648092	.	+	.	ID=GCA000160335_00592_gene;locus_tag=GCA000160335_00592;gene=phrB
contig_1	Pyrodigal	CDS	646719	648092	.	+	0	ID=GCA000160335_00592;Name=Deoxyribodipyrimidine photo-lyase;locus_tag=GCA000160335_00592;product=Deoxyribodipyrimidine photo-lyase;gene=phrB;Parent=GCA000160335_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0415,COG:L,RefSeq:WP_000952030.1,SO:0001217,UniParc:UPI00003B14D2,UniRef:UniRef100_A0A7Z7QXA7,UniRef:UniRef50_A0A0E7MV68,UniRef:UniRef90_A0A390QMX5
contig_1	Pyrodigal	gene	648247	648531	.	-	.	ID=GCA000160335_00593_gene;locus_tag=GCA000160335_00593
contig_1	Pyrodigal	CDS	648247	648531	.	-	0	ID=GCA000160335_00593;Name=Membrane spanning protein;locus_tag=GCA000160335_00593;product=Membrane spanning protein;Parent=GCA000160335_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154465.1,SO:0001217,UniParc:UPI00000D7813,UniRef:UniRef100_A0A7Z7QXJ8,UniRef:UniRef50_A0A2T4Q280,UniRef:UniRef90_A0A7Z7QXJ8
contig_1	Pyrodigal	gene	648528	649145	.	-	.	ID=GCA000160335_00594_gene;locus_tag=GCA000160335_00594
contig_1	Pyrodigal	CDS	648528	649145	.	-	0	ID=GCA000160335_00594;Name=DUF1361 domain-containing protein;locus_tag=GCA000160335_00594;product=DUF1361 domain-containing protein;Parent=GCA000160335_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4330,COG:S,RefSeq:WP_001191871.1,SO:0001217,UniParc:UPI0001D16945,UniRef:UniRef100_A0A5S9ETM7,UniRef:UniRef50_Q2G0A4,UniRef:UniRef90_Q2G0A4
contig_1	Pyrodigal	gene	649332	649754	.	-	.	ID=GCA000160335_00595_gene;locus_tag=GCA000160335_00595;gene=aF0104
contig_1	Pyrodigal	CDS	649332	649754	.	-	0	ID=GCA000160335_00595;Name=PPC domain-containing protein;locus_tag=GCA000160335_00595;product=PPC domain-containing protein;gene=aF0104;Parent=GCA000160335_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1661,COG:R,RefSeq:WP_000776010.1,SO:0001217,UniParc:UPI00003B14D4,UniRef:UniRef100_A0A166NFH8,UniRef:UniRef50_Q2G0A3,UniRef:UniRef90_Q2G0A3
contig_1	Pyrodigal	gene	649964	651130	.	+	.	ID=GCA000160335_00596_gene;locus_tag=GCA000160335_00596;gene=norA
contig_1	Pyrodigal	CDS	649964	651130	.	+	0	ID=GCA000160335_00596;Name=Quinolone resistance protein NorA;locus_tag=GCA000160335_00596;product=Quinolone resistance protein NorA;Dbxref=GO:0005886,GO:0042910;gene=norA;Parent=GCA000160335_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001041284.1,SO:0001217,UniParc:UPI00000BC168,UniRef:UniRef100_A0A7Z7QY81,UniRef:UniRef50_P0A0J4,UniRef:UniRef90_P0A0J4
contig_1	Pyrodigal	gene	651427	651879	.	+	.	ID=GCA000160335_00597_gene;locus_tag=GCA000160335_00597
contig_1	Pyrodigal	CDS	651427	651879	.	+	0	ID=GCA000160335_00597;Name=Lipoprotein;locus_tag=GCA000160335_00597;product=Lipoprotein;Parent=GCA000160335_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000216727.1,SO:0001217,UniParc:UPI00004B5B55,UniRef:UniRef100_Q2G0A1,UniRef:UniRef50_Q2G0A1,UniRef:UniRef90_Q2G0A1
contig_1	Pyrodigal	gene	652053	652535	.	+	.	ID=GCA000160335_00598_gene;locus_tag=GCA000160335_00598;gene=ybaK
contig_1	Pyrodigal	CDS	652053	652535	.	+	0	ID=GCA000160335_00598;Name=Cys-tRNA(Pro) deacylase;locus_tag=GCA000160335_00598;product=Cys-tRNA(Pro) deacylase;Dbxref=GO:0002161,GO:0043039;gene=ybaK;Parent=GCA000160335_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,KEGG:K03976,RefSeq:WP_001107240.1,SO:0001217,UniParc:UPI00003B14D7,UniRef:UniRef100_A0A7Z7W0Z3,UniRef:UniRef50_A0A2T4MLR5,UniRef:UniRef90_A0A0U1MHA1;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	652785	653549	.	+	.	ID=GCA000160335_00599_gene;locus_tag=GCA000160335_00599;gene=glpR
contig_1	Pyrodigal	CDS	652785	653549	.	+	0	ID=GCA000160335_00599;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000160335_00599;product=HTH deoR-type domain-containing protein;gene=glpR;Parent=GCA000160335_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_001574605.1,SO:0001217,UniParc:UPI00019CD787,UniRef:UniRef100_A0A7Z7W141,UniRef:UniRef50_Q2G240,UniRef:UniRef90_Q2G240
contig_1	Pyrodigal	gene	653546	654466	.	+	.	ID=GCA000160335_00600_gene;locus_tag=GCA000160335_00600;gene=pfkB
contig_1	Pyrodigal	CDS	653546	654466	.	+	0	ID=GCA000160335_00600;Name=1-phosphofructokinase;locus_tag=GCA000160335_00600;product=1-phosphofructokinase;Dbxref=GO:0008662;gene=pfkB;Parent=GCA000160335_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_000640738.1,SO:0001217,UniParc:UPI00003B14D9,UniRef:UniRef100_A0A7Z7W1A0,UniRef:UniRef50_Q9KWK1,UniRef:UniRef90_Q9KWK1;ec_number=2.7.1.56
contig_1	Pyrodigal	gene	654472	656430	.	+	.	ID=GCA000160335_00601_gene;locus_tag=GCA000160335_00601;gene=ptsN
contig_1	Pyrodigal	CDS	654472	656430	.	+	0	ID=GCA000160335_00601;Name=PTS fructose transporter subunit IIC;locus_tag=GCA000160335_00601;product=PTS fructose transporter subunit IIC;gene=ptsN;Parent=GCA000160335_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_001266540.1,SO:0001217,UniParc:UPI00003B14DA,UniRef:UniRef100_A0A0E1X7L4,UniRef:UniRef50_B9DK53,UniRef:UniRef90_A0A389U8J0
contig_1	Pyrodigal	gene	656733	657914	.	+	.	ID=GCA000160335_00602_gene;locus_tag=GCA000160335_00602;gene=nagA
contig_1	Pyrodigal	CDS	656733	657914	.	+	0	ID=GCA000160335_00602;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000160335_00602;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA000160335_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1820,COG:G,KEGG:K01443,RefSeq:WP_001292236.1,SO:0001217,UniParc:UPI0001B70086,UniRef:UniRef100_UPI0001B70086,UniRef:UniRef50_A0A0D6G8V3,UniRef:UniRef90_A0A0D6G8V3;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	658135	659484	.	+	.	ID=GCA000160335_00603_gene;locus_tag=GCA000160335_00603;gene=mpfA
contig_1	Pyrodigal	CDS	658135	659484	.	+	0	ID=GCA000160335_00603;Name=HlyC/CorC family transporter;locus_tag=GCA000160335_00603;product=HlyC/CorC family transporter;gene=mpfA;Parent=GCA000160335_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,KEGG:K03699,RefSeq:WP_000450253.1,SO:0001217,UniParc:UPI00003B14DC,UniRef:UniRef100_A0A7Z7QXF2,UniRef:UniRef50_A0A380G318,UniRef:UniRef90_Q2G2T9
contig_1	Pyrodigal	gene	659698	660537	.	+	.	ID=GCA000160335_00604_gene;locus_tag=GCA000160335_00604;gene=aRA1
contig_1	Pyrodigal	CDS	659698	660537	.	+	0	ID=GCA000160335_00604;Name=Aldo/keto reductase;locus_tag=GCA000160335_00604;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000160335_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000931237.1,SO:0001217,UniParc:UPI00000547BA,UniRef:UniRef100_Q2G2T8,UniRef:UniRef50_A0A7U7PXK1,UniRef:UniRef90_A0A0U1MH70
contig_1	Pyrodigal	gene	660669	661652	.	+	.	ID=GCA000160335_00605_gene;locus_tag=GCA000160335_00605;gene=csbB
contig_1	Pyrodigal	CDS	660669	661652	.	+	0	ID=GCA000160335_00605;Name=lipoteichoic acid-specific glycosylation protein CsbB;locus_tag=GCA000160335_00605;product=lipoteichoic acid-specific glycosylation protein CsbB;gene=csbB;Parent=GCA000160335_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702782,COG:COG0463,COG:M,KEGG:K25617,RefSeq:WP_000702777.1,SO:0001217,UniParc:UPI0001B70088,UniRef:UniRef100_UPI0001B70088,UniRef:UniRef50_B9DKD4,UniRef:UniRef90_A0AAE8PA40;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	661724	662779	.	-	.	ID=GCA000160335_00606_gene;locus_tag=GCA000160335_00606;gene=saeS
contig_1	Pyrodigal	CDS	661724	662779	.	-	0	ID=GCA000160335_00606;Name=two-component system sensor histidine kinase SaeS;locus_tag=GCA000160335_00606;product=two-component system sensor histidine kinase SaeS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036;gene=saeS;Parent=GCA000160335_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000244412,COG:COG0642,COG:T,KEGG:K10681,RefSeq:WP_000244416.1,SO:0001217,UniParc:UPI00003B14DE,UniRef:UniRef100_Q6GIT7,UniRef:UniRef50_Q2G2U1,UniRef:UniRef90_Q2G2U1;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	662779	663465	.	-	.	ID=GCA000160335_00607_gene;locus_tag=GCA000160335_00607;gene=saeR
contig_1	Pyrodigal	CDS	662779	663465	.	-	0	ID=GCA000160335_00607;Name=response regulator transcription factor SaeR;locus_tag=GCA000160335_00607;product=response regulator transcription factor SaeR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=saeR;Parent=GCA000160335_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000149344,BlastRules:WP_001830352,COG:COG0745,COG:TK,KEGG:K10682,RefSeq:WP_000149344.1,SO:0001217,UniParc:UPI00000547B6,UniRef:UniRef100_Q2G2G2,UniRef:UniRef50_Q2G2G2,UniRef:UniRef90_Q2G2G2
contig_1	Pyrodigal	gene	663440	663913	.	-	.	ID=GCA000160335_00608_gene;locus_tag=GCA000160335_00608;gene=doxX
contig_1	Pyrodigal	CDS	663440	663913	.	-	0	ID=GCA000160335_00608;Name=DoxX family protein;locus_tag=GCA000160335_00608;product=DoxX family protein;gene=doxX;Parent=GCA000160335_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037807.1,SO:0001217,UniParc:UPI000018DB08,UniRef:UniRef100_Q2G2G1,UniRef:UniRef50_Q2G2G1,UniRef:UniRef90_Q2G2G1
contig_1	Pyrodigal	gene	664255	664695	.	-	.	ID=GCA000160335_00609_gene;locus_tag=GCA000160335_00609
contig_1	Pyrodigal	CDS	664255	664695	.	-	0	ID=GCA000160335_00609;Name=DM13 domain-containing protein;locus_tag=GCA000160335_00609;product=DM13 domain-containing protein;Parent=GCA000160335_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093552.1,SO:0001217,UniParc:UPI00003B14DF,UniRef:UniRef100_A0A7Z7QXW2,UniRef:UniRef50_Q2G2G0,UniRef:UniRef90_Q2G2G0
contig_1	Pyrodigal	gene	664975	665559	.	-	.	ID=GCA000160335_00610_gene;locus_tag=GCA000160335_00610
contig_1	Pyrodigal	CDS	664975	665559	.	-	0	ID=GCA000160335_00610;Name=hypothetical protein;locus_tag=GCA000160335_00610;product=hypothetical protein;Parent=GCA000160335_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000637686.1,SO:0001217,UniParc:UPI00003B14E0,UniRef:UniRef100_A0A7Z7QXA9,UniRef:UniRef50_Q2G2F9,UniRef:UniRef90_Q2G2F9
contig_1	Pyrodigal	gene	665658	666371	.	-	.	ID=GCA000160335_00611_gene;locus_tag=GCA000160335_00611;gene=queE
contig_1	Pyrodigal	CDS	665658	666371	.	-	0	ID=GCA000160335_00611;Name=7-carboxy-7-deazaguanine synthase QueE;locus_tag=GCA000160335_00611;product=7-carboxy-7-deazaguanine synthase QueE;Dbxref=GO:0006400,GO:0051539,GO:1904047;gene=queE;Parent=GCA000160335_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_001062968.1,SO:0001217,UniParc:UPI00003B14E1,UniRef:UniRef100_A0A7Z7QY94,UniRef:UniRef50_Q81G67,UniRef:UniRef90_A0A7Z7QY94;ec_number=4.3.99.3
contig_1	Pyrodigal	gene	666375	666794	.	-	.	ID=GCA000160335_00612_gene;locus_tag=GCA000160335_00612;gene=queD
contig_1	Pyrodigal	CDS	666375	666794	.	-	0	ID=GCA000160335_00612;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA000160335_00612;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008616;gene=queD;Parent=GCA000160335_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,RefSeq:WP_000941336.1,SO:0001217,UniParc:UPI00000D7847,UniRef:UniRef100_Q2G1X5,UniRef:UniRef50_A0A0D6XSA1,UniRef:UniRef90_A0A2S6D445;ec_number=4.2.3.12
contig_1	Pyrodigal	gene	666796	667464	.	-	.	ID=GCA000160335_00613_gene;locus_tag=GCA000160335_00613;gene=queC
contig_1	Pyrodigal	CDS	666796	667464	.	-	0	ID=GCA000160335_00613;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA000160335_00613;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0005524,GO:0008270,GO:0008616,GO:0016879;gene=queC;Parent=GCA000160335_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,KEGG:K06920,RefSeq:WP_000446724.1,SO:0001217,UniParc:UPI00000D7650,UniRef:UniRef100_Q2G1X6,UniRef:UniRef50_O31675,UniRef:UniRef90_Q2G1X6;ec_number=6.3.4.20
contig_1	Pyrodigal	gene	667814	668407	.	+	.	ID=GCA000160335_00614_gene;locus_tag=GCA000160335_00614;gene=pabA
contig_1	Pyrodigal	CDS	667814	668407	.	+	0	ID=GCA000160335_00614;Name=Aminodeoxychorismate/anthranilate synthase component II;locus_tag=GCA000160335_00614;product=Aminodeoxychorismate/anthranilate synthase component II;gene=pabA;Parent=GCA000160335_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000604510.1,SO:0001217,UniParc:UPI0001B70089,UniRef:UniRef100_UPI0001B70089,UniRef:UniRef50_A0A2T7BWH4,UniRef:UniRef90_A0A2S6D430
contig_1	Pyrodigal	gene	668391	669542	.	+	.	ID=GCA000160335_00615_gene;locus_tag=GCA000160335_00615;gene=trpE
contig_1	Pyrodigal	CDS	668391	669542	.	+	0	ID=GCA000160335_00615;Name=Aminodeoxychorismate synthase component I;locus_tag=GCA000160335_00615;product=Aminodeoxychorismate synthase component I;gene=trpE;Parent=GCA000160335_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_001217804.1,SO:0001217,UniParc:UPI00003B14E3,UniRef:UniRef100_A0A7Z7W1A7,UniRef:UniRef50_A0A418IG77,UniRef:UniRef90_A0AAE2ZQN1
contig_1	Pyrodigal	gene	669542	670150	.	+	.	ID=GCA000160335_00616_gene;locus_tag=GCA000160335_00616;gene=ilvE
contig_1	Pyrodigal	CDS	669542	670150	.	+	0	ID=GCA000160335_00616;Name=Aminodeoxychorismate lyase;locus_tag=GCA000160335_00616;product=Aminodeoxychorismate lyase;gene=ilvE;Parent=GCA000160335_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_001175769.1,SO:0001217,UniParc:UPI00003B14E4,UniRef:UniRef100_A0A7Z7W0Y6,UniRef:UniRef50_A0A380H6Y2,UniRef:UniRef90_A0AAE8TJ44
contig_1	Infernal	gene	670282	670361	.	-	.	ID=GCA000160335_00617_gene;locus_tag=GCA000160335_00617;gene=sau-66
contig_1	Infernal	ncRNA	670282	670361	2.2e-19	-	.	ID=GCA000160335_00617;Name=Staphylococcus sRNA sau-66;locus_tag=GCA000160335_00617;product=Staphylococcus sRNA sau-66;Dbxref=RFAM:RF02395;Parent=GCA000160335_00617_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02395
contig_1	Pyrodigal	gene	670510	671220	.	+	.	ID=GCA000160335_00618_gene;locus_tag=GCA000160335_00618;gene=pxpB
contig_1	Pyrodigal	CDS	670510	671220	.	+	0	ID=GCA000160335_00618;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000160335_00618;product=Carboxyltransferase domain-containing protein;gene=pxpB;Parent=GCA000160335_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000708692.1,SO:0001217,UniParc:UPI00000547AA,UniRef:UniRef100_Q2G095,UniRef:UniRef50_A0A143PAI6,UniRef:UniRef90_Q2G095
contig_1	Pyrodigal	gene	671204	672208	.	+	.	ID=GCA000160335_00619_gene;locus_tag=GCA000160335_00619;gene=pxpC
contig_1	Pyrodigal	CDS	671204	672208	.	+	0	ID=GCA000160335_00619;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000160335_00619;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000160335_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000022329.1,SO:0001217,UniParc:UPI00003B14E7,UniRef:UniRef100_A0A7Z7QXG1,UniRef:UniRef50_Q2G094,UniRef:UniRef90_Q2G094
contig_1	Pyrodigal	gene	672682	674622	.	+	.	ID=GCA000160335_00620_gene;locus_tag=GCA000160335_00620;gene=ltaS
contig_1	Pyrodigal	CDS	672682	674622	.	+	0	ID=GCA000160335_00620;Name=polyglycerol-phosphate lipoteichoic acid synthase LtaS;locus_tag=GCA000160335_00620;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;Dbxref=GO:0005576,GO:0005886,GO:0016740,GO:0046872,GO:0070395,GO:0071555;gene=ltaS;Parent=GCA000160335_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000098285,COG:COG1368,COG:M,KEGG:K19005,RefSeq:WP_000098285.1,SO:0001217,UniParc:UPI00000547A8,UniRef:UniRef100_Q2G093,UniRef:UniRef50_Q797B3,UniRef:UniRef90_Q2G093;ec_number=2.7.8.20
contig_1	Pyrodigal	gene	674900	676777	.	+	.	ID=GCA000160335_00621_gene;locus_tag=GCA000160335_00621;gene=abc-f
contig_1	Pyrodigal	CDS	674900	676777	.	+	0	ID=GCA000160335_00621;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000160335_00621;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000160335_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,SO:0001217,UniRef:UniRef50_S2Y7N2,UniRef:UniRef90_A0A7U7PXX1
contig_1	Pyrodigal	gene	676789	678570	.	+	.	ID=GCA000160335_00622_gene;locus_tag=GCA000160335_00622;gene=recQ
contig_1	Pyrodigal	CDS	676789	678570	.	+	0	ID=GCA000160335_00622;Name=DNA helicase RecQ;locus_tag=GCA000160335_00622;product=DNA helicase RecQ;Dbxref=GO:0003678,GO:0006310,GO:0009432;gene=recQ;Parent=GCA000160335_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000983677.1,SO:0001217,UniParc:UPI00000547A6,UniRef:UniRef100_Q2G090,UniRef:UniRef50_Q2G090,UniRef:UniRef90_Q2G090;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	678791	679768	.	+	.	ID=GCA000160335_00623_gene;locus_tag=GCA000160335_00623;gene=opuBA
contig_1	Pyrodigal	CDS	678791	679768	.	+	0	ID=GCA000160335_00623;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00623;product=ABC transporter ATP-binding protein;gene=opuBA;Parent=GCA000160335_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000589245.1,SO:0001217,UniParc:UPI0001B700AB,UniRef:UniRef100_UPI0001B700AB,UniRef:UniRef50_D7UZC8,UniRef:UniRef90_A0A389QD38
contig_1	Pyrodigal	gene	679761	681275	.	+	.	ID=GCA000160335_00624_gene;locus_tag=GCA000160335_00624;gene=egtUBC
contig_1	Pyrodigal	CDS	679761	681275	.	+	0	ID=GCA000160335_00624;Name=putative ergothioneine transporter EgtUBC;locus_tag=GCA000160335_00624;product=putative ergothioneine transporter EgtUBC;Dbxref=GO:0015675,GO:0016597,GO:0016787,GO:0022857,GO:0031460,GO:0043190;gene=egtUBC;Parent=GCA000160335_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000180987.1,SO:0001217,UniParc:UPI00003B14EA,UniRef:UniRef100_A0A7Z7QXM5,UniRef:UniRef50_A0A0H2XK79,UniRef:UniRef90_A0A0H2XK79
contig_1	Pyrodigal	gene	681515	682573	.	+	.	ID=GCA000160335_00625_gene;locus_tag=GCA000160335_00625;gene=hisC
contig_1	Pyrodigal	CDS	681515	682573	.	+	0	ID=GCA000160335_00625;Name=histidinol-phosphate transaminase;locus_tag=GCA000160335_00625;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000160335_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_000663016.1,SO:0001217,UniParc:UPI00003B14EB,UniRef:UniRef100_Q6GIR8,UniRef:UniRef50_Q2G087,UniRef:UniRef90_Q2G087;ec_number=2.6.1.9
contig_1	Pyrodigal	gene	682732	683274	.	+	.	ID=GCA000160335_00626_gene;locus_tag=GCA000160335_00626;gene=yorC
contig_1	Pyrodigal	CDS	682732	683274	.	+	0	ID=GCA000160335_00626;Name=Putative 5'(3')-deoxyribonucleotidase;locus_tag=GCA000160335_00626;product=Putative 5'(3')-deoxyribonucleotidase;Dbxref=GO:0008253,GO:0009223,GO:0046872;gene=yorC;Parent=GCA000160335_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4502,COG:F,RefSeq:WP_000197262.1,SO:0001217,UniParc:UPI00000CA98C,UniRef:UniRef100_P66840,UniRef:UniRef50_Q5HR07,UniRef:UniRef90_P66840;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	683279	683413	.	+	.	ID=GCA000160335_00627_gene;locus_tag=GCA000160335_00627
contig_1	Pyrodigal	CDS	683279	683413	.	+	0	ID=GCA000160335_00627;Name=Nitrogen regulation protein NIFR3;locus_tag=GCA000160335_00627;product=Nitrogen regulation protein NIFR3;Parent=GCA000160335_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B14EC,UniRef:UniRef100_A0A0E1XHX6,UniRef:UniRef50_A0A0E1XHX6,UniRef:UniRef90_A0A0E1XHX6
contig_1	Pyrodigal	gene	683826	684743	.	-	.	ID=GCA000160335_00628_gene;locus_tag=GCA000160335_00628;gene=lCB5
contig_1	Pyrodigal	CDS	683826	684743	.	-	0	ID=GCA000160335_00628;Name=Putative lipid kinase SA0681;locus_tag=GCA000160335_00628;product=Putative lipid kinase SA0681;Dbxref=GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=lCB5;Parent=GCA000160335_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_000429002.1,SO:0001217,UniParc:UPI00003B14ED,UniRef:UniRef100_Q6GIR5,UniRef:UniRef50_Q6GIR5,UniRef:UniRef90_Q6GIR5;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	685013	686518	.	-	.	ID=GCA000160335_00629_gene;locus_tag=GCA000160335_00629;gene=pTR2
contig_1	Pyrodigal	CDS	685013	686518	.	-	0	ID=GCA000160335_00629;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_00629;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=pTR2;Parent=GCA000160335_00629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3104,COG:E,RefSeq:WP_000193750.1,SO:0001217,UniParc:UPI00003B14EE,UniRef:UniRef100_A0A166Q0B3,UniRef:UniRef50_Q2G082,UniRef:UniRef90_Q2G082
contig_1	Pyrodigal	gene	686858	687358	.	-	.	ID=GCA000160335_00630_gene;locus_tag=GCA000160335_00630;gene=queF
contig_1	Pyrodigal	CDS	686858	687358	.	-	0	ID=GCA000160335_00630;Name=preQ(1) synthase;locus_tag=GCA000160335_00630;product=preQ(1) synthase;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0046857;gene=queF;Parent=GCA000160335_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0780,COG:J,RefSeq:WP_000930016.1,SO:0001217,UniParc:UPI00003B14EF,UniRef:UniRef100_Q6GIR3,UniRef:UniRef50_Q2G081,UniRef:UniRef90_Q2G081;ec_number=1.7.1.13
contig_1	Pyrodigal	gene	687378	688244	.	-	.	ID=GCA000160335_00631_gene;locus_tag=GCA000160335_00631;gene=rhaT
contig_1	Pyrodigal	CDS	687378	688244	.	-	0	ID=GCA000160335_00631;Name=EamA domain-containing protein;locus_tag=GCA000160335_00631;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000160335_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_001068491.1,SO:0001217,UniParc:UPI00003B14F0,UniRef:UniRef100_A0A7Z7W259,UniRef:UniRef50_Q2G080,UniRef:UniRef90_Q2G080
contig_1	Pyrodigal	gene	689046	689444	.	+	.	ID=GCA000160335_00632_gene;locus_tag=GCA000160335_00632;gene=nrdI
contig_1	Pyrodigal	CDS	689046	689444	.	+	0	ID=GCA000160335_00632;Name=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;locus_tag=GCA000160335_00632;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;Dbxref=GO:0009263,GO:0010181,GO:0036211;gene=nrdI;Parent=GCA000160335_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1780,COG:F,KEGG:K03647,RefSeq:WP_000692521.1,SO:0001217,UniParc:UPI00001304E3,UniRef:UniRef100_Q2G079,UniRef:UniRef50_Q2G079,UniRef:UniRef90_Q2G079
contig_1	Pyrodigal	gene	689407	691512	.	+	.	ID=GCA000160335_00633_gene;locus_tag=GCA000160335_00633;gene=nrdE
contig_1	Pyrodigal	CDS	689407	691512	.	+	0	ID=GCA000160335_00633;Name=class 1b ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000160335_00633;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0006260;gene=nrdE;Parent=GCA000160335_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_000855505.1,SO:0001217,UniParc:UPI000005479A,UniRef:UniRef100_Q2G078,UniRef:UniRef50_A0A240A193,UniRef:UniRef90_A0AAE3D4Q3;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	691632	692603	.	+	.	ID=GCA000160335_00634_gene;locus_tag=GCA000160335_00634;gene=nrdF
contig_1	Pyrodigal	CDS	691632	692603	.	+	0	ID=GCA000160335_00634;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000160335_00634;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009263;gene=nrdF;Parent=GCA000160335_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_000562498.1,SO:0001217,UniParc:UPI0000054799,UniRef:UniRef100_Q2G077,UniRef:UniRef50_A0A1L8Y4Q5,UniRef:UniRef90_A0A1L8Y4Q5;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	692980	693951	.	+	.	ID=GCA000160335_00635_gene;locus_tag=GCA000160335_00635;gene=ceuB
contig_1	Pyrodigal	CDS	692980	693951	.	+	0	ID=GCA000160335_00635;Name=FatD;locus_tag=GCA000160335_00635;product=FatD;gene=ceuB;Parent=GCA000160335_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4606,COG:P,RefSeq:WP_000876309.1,SO:0001217,UniParc:UPI0001B700AC,UniRef:UniRef100_UPI0001B700AC,UniRef:UniRef50_P94418,UniRef:UniRef90_A0A0D6I039
contig_1	Pyrodigal	gene	693938	694894	.	+	.	ID=GCA000160335_00636_gene;locus_tag=GCA000160335_00636;gene=ceuC
contig_1	Pyrodigal	CDS	693938	694894	.	+	0	ID=GCA000160335_00636;Name=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000160335_00636;product=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ceuC;Parent=GCA000160335_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4605,COG:P,RefSeq:WP_001245566.1,SO:0001217,UniParc:UPI00003B14F2,UniRef:UniRef100_A0A7Z7QXE2,UniRef:UniRef50_W8TNI3,UniRef:UniRef90_W8TNI3
contig_1	Pyrodigal	gene	694891	695652	.	+	.	ID=GCA000160335_00637_gene;locus_tag=GCA000160335_00637;gene=ceuD
contig_1	Pyrodigal	CDS	694891	695652	.	+	0	ID=GCA000160335_00637;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_00637;product=ABC transporter domain-containing protein;gene=ceuD;Parent=GCA000160335_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4604,COG:P,RefSeq:WP_000616865.1,SO:0001217,UniParc:UPI00003B14F3,UniRef:UniRef100_A0A7Z7QXN3,UniRef:UniRef50_Q81XB3,UniRef:UniRef90_Q2G072
contig_1	Pyrodigal	gene	695767	696795	.	+	.	ID=GCA000160335_00638_gene;locus_tag=GCA000160335_00638;gene=ceuA
contig_1	Pyrodigal	CDS	695767	696795	.	+	0	ID=GCA000160335_00638;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000160335_00638;product=Fe/B12 periplasmic-binding domain-containing protein;gene=ceuA;Parent=GCA000160335_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4607,COG:P,RefSeq:WP_000754458.1,SO:0001217,UniParc:UPI00003B14F4,UniRef:UniRef100_A0A7Z7QXX9,UniRef:UniRef50_A0A239ZZP9,UniRef:UniRef90_Q2G071
contig_1	Pyrodigal	gene	697112	697426	.	-	.	ID=GCA000160335_00639_gene;locus_tag=GCA000160335_00639;gene=hot13
contig_1	Pyrodigal	CDS	697112	697426	.	-	0	ID=GCA000160335_00639;Name=CHY-type domain-containing protein;locus_tag=GCA000160335_00639;product=CHY-type domain-containing protein;gene=hot13;Parent=GCA000160335_00639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4357,COG:O,RefSeq:WP_001127269.1,SO:0001217,UniParc:UPI00000D78A9,UniRef:UniRef100_Q2G070,UniRef:UniRef50_A0A166MHJ2,UniRef:UniRef90_Q2G070
contig_1	Pyrodigal	gene	697444	698367	.	-	.	ID=GCA000160335_00640_gene;locus_tag=GCA000160335_00640;gene=murB
contig_1	Pyrodigal	CDS	697444	698367	.	-	0	ID=GCA000160335_00640;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000160335_00640;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000160335_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_000608444.1,SO:0001217,UniParc:UPI00003B14F5,UniRef:UniRef100_Q6GIQ3,UniRef:UniRef50_A4ILI2,UniRef:UniRef90_Q2G069;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	698494	699012	.	-	.	ID=GCA000160335_00641_gene;locus_tag=GCA000160335_00641;gene=grpB
contig_1	Pyrodigal	CDS	698494	699012	.	-	0	ID=GCA000160335_00641;Name=GrpB family protein;locus_tag=GCA000160335_00641;product=GrpB family protein;gene=grpB;Parent=GCA000160335_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2320,COG:R,RefSeq:WP_000287208.1,SO:0001217,UniParc:UPI00003B14F6,UniRef:UniRef100_A0A166NED8,UniRef:UniRef50_Q5HQZ0,UniRef:UniRef90_Q2G068
contig_1	Pyrodigal	gene	699132	699533	.	+	.	ID=GCA000160335_00642_gene;locus_tag=GCA000160335_00642
contig_1	Pyrodigal	CDS	699132	699533	.	+	0	ID=GCA000160335_00642;Name=EMYY motif lipoprotein;locus_tag=GCA000160335_00642;product=EMYY motif lipoprotein;Parent=GCA000160335_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00204352C3,UniRef:UniRef90_UPI00204352C3
contig_1	Pyrodigal	gene	699757	700011	.	+	.	ID=GCA000160335_00643_gene;locus_tag=GCA000160335_00643;pseudogene=unitary
contig_1	Pyrodigal	CDS	699757	700011	.	+	0	ID=GCA000160335_00643;Name=EMYY motif lipoprotein;locus_tag=GCA000160335_00643;product=EMYY motif lipoprotein;pseudogene=unitary;Parent=GCA000160335_00643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0037DCBD65,UniRef:UniRef90_UPI0037DCBD65
contig_1	Pyrodigal	gene	700165	700485	.	+	.	ID=GCA000160335_00644_gene;locus_tag=GCA000160335_00644;gene=ytxJ
contig_1	Pyrodigal	CDS	700165	700485	.	+	0	ID=GCA000160335_00644;Name=Bacillithiol system redox-active protein YtxJ;locus_tag=GCA000160335_00644;product=Bacillithiol system redox-active protein YtxJ;gene=ytxJ;Parent=GCA000160335_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26959,RefSeq:WP_000985617.1,SO:0001217,UniParc:UPI00000D78B4,UniRef:UniRef100_Q2G066,UniRef:UniRef50_Q2G066,UniRef:UniRef90_Q2G066
contig_1	Pyrodigal	gene	700910	702034	.	+	.	ID=GCA000160335_00645_gene;locus_tag=GCA000160335_00645;gene=glxK
contig_1	Pyrodigal	CDS	700910	702034	.	+	0	ID=GCA000160335_00645;Name=Glycerate kinase;locus_tag=GCA000160335_00645;product=Glycerate kinase;gene=glxK;Parent=GCA000160335_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_000866741.1,SO:0001217,UniParc:UPI00003B14F7,UniRef:UniRef100_A0A7Z7W1B5,UniRef:UniRef50_A0A6N3ELY9,UniRef:UniRef90_Q2G065;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	702222	703448	.	-	.	ID=GCA000160335_00646_gene;locus_tag=GCA000160335_00646;gene=pepT
contig_1	Pyrodigal	CDS	702222	703448	.	-	0	ID=GCA000160335_00646;Name=peptidase T;locus_tag=GCA000160335_00646;product=peptidase T;Dbxref=GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0043171,GO:0045148;gene=pepT;Parent=GCA000160335_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000795816.1,SO:0001217,UniParc:UPI0001B700AE,UniRef:UniRef100_UPI0001B700AE,UniRef:UniRef50_P55179,UniRef:UniRef90_Q2G064;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	703462	703956	.	-	.	ID=GCA000160335_00647_gene;locus_tag=GCA000160335_00647;gene=yjjB
contig_1	Pyrodigal	CDS	703462	703956	.	-	0	ID=GCA000160335_00647;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000160335_00647;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000160335_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000899891.1,SO:0001217,UniParc:UPI00003B14F9,UniRef:UniRef100_A0A7Z7W261,UniRef:UniRef50_Q2G063,UniRef:UniRef90_Q2G063
contig_1	Pyrodigal	gene	703974	704735	.	-	.	ID=GCA000160335_00648_gene;locus_tag=GCA000160335_00648;gene=yjjP
contig_1	Pyrodigal	CDS	703974	704735	.	-	0	ID=GCA000160335_00648;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000160335_00648;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000160335_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_001113406.1,SO:0001217,UniParc:UPI000005226C,UniRef:UniRef100_Q2G062,UniRef:UniRef50_A0A853V662,UniRef:UniRef90_Q2G062
contig_1	Pyrodigal	gene	704931	706001	.	-	.	ID=GCA000160335_00649_gene;locus_tag=GCA000160335_00649;gene=gGDEF
contig_1	Pyrodigal	CDS	704931	706001	.	-	0	ID=GCA000160335_00649;Name=putative membrane protein MW0708;locus_tag=GCA000160335_00649;product=putative membrane protein MW0708;Dbxref=GO:0000155,GO:0005886,GO:0043709,GO:0052621,GO:0071555,GO:1902201;gene=gGDEF;Parent=GCA000160335_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2199,COG:T,RefSeq:WP_000460983.1,SO:0001217,UniParc:UPI0000054788,UniRef:UniRef100_Q2G061,UniRef:UniRef50_Q5HQY3,UniRef:UniRef90_Q2G061
contig_1	Pyrodigal	gene	706319	707374	.	+	.	ID=GCA000160335_00650_gene;locus_tag=GCA000160335_00650;gene=rfe
contig_1	Pyrodigal	CDS	706319	707374	.	+	0	ID=GCA000160335_00650;Name=Glycosyl transferase family protein;locus_tag=GCA000160335_00650;product=Glycosyl transferase family protein;gene=rfe;Parent=GCA000160335_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_000258151.1,SO:0001217,UniParc:UPI0000054787,UniRef:UniRef100_Q2G060,UniRef:UniRef50_A0A380GAZ8,UniRef:UniRef90_Q53761;ec_number=2.7.8.35
contig_1	Pyrodigal	gene	707538	708179	.	-	.	ID=GCA000160335_00651_gene;locus_tag=GCA000160335_00651;gene=yIH1
contig_1	Pyrodigal	CDS	707538	708179	.	-	0	ID=GCA000160335_00651;Name=YigZ family protein;locus_tag=GCA000160335_00651;product=YigZ family protein;gene=yIH1;Parent=GCA000160335_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1739,COG:R,RefSeq:WP_000192947.1,SO:0001217,UniParc:UPI0000054786,UniRef:UniRef100_Q2G059,UniRef:UniRef50_Q2G059,UniRef:UniRef90_Q2G059
contig_1	Pyrodigal	gene	708323	709189	.	+	.	ID=GCA000160335_00652_gene;locus_tag=GCA000160335_00652;gene=fakB1
contig_1	Pyrodigal	CDS	708323	709189	.	+	0	ID=GCA000160335_00652;Name=fatty acid kinase binding subunit FakB1;locus_tag=GCA000160335_00652;product=fatty acid kinase binding subunit FakB1;Dbxref=GO:0008289;gene=fakB1;Parent=GCA000160335_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1307,COG:I,RefSeq:WP_000686342.1,SO:0001217,UniParc:UPI0000139C1F,UniRef:UniRef100_Q8NXM4,UniRef:UniRef50_P0A0N1,UniRef:UniRef90_P0A0N1
contig_1	Pyrodigal	gene	709553	710635	.	+	.	ID=GCA000160335_00653_gene;locus_tag=GCA000160335_00653;gene=comFA
contig_1	Pyrodigal	CDS	709553	710635	.	+	0	ID=GCA000160335_00653;Name=Comf operon protein 1;locus_tag=GCA000160335_00653;product=Comf operon protein 1;gene=comFA;Parent=GCA000160335_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4098,COG:L,RefSeq:WP_000370984.1,SO:0001217,UniParc:UPI00003B14FA,UniRef:UniRef100_A0A7Z7QXP6,UniRef:UniRef50_S2XU73,UniRef:UniRef90_X5EK03
contig_1	Pyrodigal	gene	710628	711308	.	+	.	ID=GCA000160335_00654_gene;locus_tag=GCA000160335_00654;gene=comFC
contig_1	Pyrodigal	CDS	710628	711308	.	+	0	ID=GCA000160335_00654;Name=ComF family protein;locus_tag=GCA000160335_00654;product=ComF family protein;gene=comFC;Parent=GCA000160335_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1040,COG:R,KEGG:K02242,SO:0001217,UniRef:UniRef50_Q2G056,UniRef:UniRef90_Q2G056
contig_1	Pyrodigal	gene	711364	711936	.	+	.	ID=GCA000160335_00655_gene;locus_tag=GCA000160335_00655;gene=hpf
contig_1	Pyrodigal	CDS	711364	711936	.	+	0	ID=GCA000160335_00655;Name=ribosome hibernation-promoting factor%2C HPF/YfiA family;locus_tag=GCA000160335_00655;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;Dbxref=GO:0005840,GO:0022627,GO:0043024,GO:0045182,GO:0045900;gene=hpf;Parent=GCA000160335_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_000617735.1,SO:0001217,UniParc:UPI0000054781,UniRef:UniRef100_Q2G055,UniRef:UniRef50_P28368,UniRef:UniRef90_Q2G055
contig_1	Pyrodigal	gene	712350	714881	.	+	.	ID=GCA000160335_00656_gene;locus_tag=GCA000160335_00656;gene=secA
contig_1	Pyrodigal	CDS	712350	714881	.	+	0	ID=GCA000160335_00656;Name=preprotein translocase subunit SecA;locus_tag=GCA000160335_00656;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0008564,GO:0009898,GO:0015450,GO:0016887,GO:0017038,GO:0031522,GO:0043952,GO:0046872,GO:0065002;gene=secA;Parent=GCA000160335_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03070,RefSeq:WP_000506536.1,SO:0001217,UniParc:UPI00003B14FC,UniRef:UniRef100_Q6GIN8,UniRef:UniRef50_O06446,UniRef:UniRef90_Q6GIN8;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	715314	716306	.	+	.	ID=GCA000160335_00657_gene;locus_tag=GCA000160335_00657;gene=prfB
contig_1	Pyrodigal	CDS	715314	716306	.	+	0	ID=GCA000160335_00657;Name=peptide chain release factor 2;locus_tag=GCA000160335_00657;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfB;Parent=GCA000160335_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02836,SO:0001217,UniRef:UniRef50_Q49VV3,UniRef:UniRef90_A0A380E0H0
contig_1	Infernal	gene	716438	716690	.	+	.	ID=GCA000160335_00658_gene;locus_tag=GCA000160335_00658;gene=S35
contig_1	Infernal	ncRNA	716438	716690	8.9e-28	+	.	ID=GCA000160335_00658;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00658;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00658_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	717075	717914	.	+	.	ID=GCA000160335_00659_gene;locus_tag=GCA000160335_00659
contig_1	Pyrodigal	CDS	717075	717914	.	+	0	ID=GCA000160335_00659;Name=putative autolysin LDP;locus_tag=GCA000160335_00659;product=putative autolysin LDP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000160335_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000749385.1,SO:0001217,UniParc:UPI00003B14FE,UniRef:UniRef100_A0A7Z7W113,UniRef:UniRef50_Q2G278,UniRef:UniRef90_Q2G278;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	718088	718738	.	+	.	ID=GCA000160335_00660_gene;locus_tag=GCA000160335_00660;gene=yfbR
contig_1	Pyrodigal	CDS	718088	718738	.	+	0	ID=GCA000160335_00660;Name=HD domain-containing protein;locus_tag=GCA000160335_00660;product=HD domain-containing protein;gene=yfbR;Parent=GCA000160335_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1896,COG:FR,RefSeq:WP_000538141.1,SO:0001217,UniParc:UPI00000D7871,UniRef:UniRef100_Q2G277,UniRef:UniRef50_A0A239ZXJ0,UniRef:UniRef90_A0A2K4AJY4
contig_1	Pyrodigal	gene	718735	718971	.	+	.	ID=GCA000160335_00661_gene;locus_tag=GCA000160335_00661;gene=csbA
contig_1	Pyrodigal	CDS	718735	718971	.	+	0	ID=GCA000160335_00661;Name=DUF2198 domain-containing protein;locus_tag=GCA000160335_00661;product=DUF2198 domain-containing protein;gene=csbA;Parent=GCA000160335_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4897,COG:S,RefSeq:WP_000638419.1,SO:0001217,UniParc:UPI000005477D,UniRef:UniRef100_Q2G051,UniRef:UniRef50_Q2G051,UniRef:UniRef90_Q2G051
contig_1	Pyrodigal	gene	719240	721225	.	+	.	ID=GCA000160335_00662_gene;locus_tag=GCA000160335_00662;gene=uvrB
contig_1	Pyrodigal	CDS	719240	721225	.	+	0	ID=GCA000160335_00662;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000160335_00662;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0005515,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016787,GO:0016887;gene=uvrB;Parent=GCA000160335_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,RefSeq:WP_000229253.1,SO:0001217,UniParc:UPI0000696BE1,UniRef:UniRef100_Q2G047,UniRef:UniRef50_P56981,UniRef:UniRef90_Q4L4I5;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	721233	724079	.	+	.	ID=GCA000160335_00663_gene;locus_tag=GCA000160335_00663;gene=uvrA
contig_1	Pyrodigal	CDS	721233	724079	.	+	0	ID=GCA000160335_00663;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000160335_00663;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0008270,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrA;Parent=GCA000160335_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_000662687.1,SO:0001217,UniParc:UPI00003B1501,UniRef:UniRef100_Q6GIN2,UniRef:UniRef50_Q8F435,UniRef:UniRef90_P63382;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	724690	725622	.	+	.	ID=GCA000160335_00664_gene;locus_tag=GCA000160335_00664;gene=hprK
contig_1	Pyrodigal	CDS	724690	725622	.	+	0	ID=GCA000160335_00664;Name=HPr(Ser) kinase/phosphatase;locus_tag=GCA000160335_00664;product=HPr(Ser) kinase/phosphatase;Dbxref=GO:0000155,GO:0000160,GO:0000287,GO:0004674,GO:0004712,GO:0005524,GO:0006109;gene=hprK;Parent=GCA000160335_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1493,COG:T,KEGG:K06023,RefSeq:WP_000958224.1,SO:0001217,UniParc:UPI0000054778,UniRef:UniRef100_Q2G045,UniRef:UniRef50_O34483,UniRef:UniRef90_Q2G045;ec_number=2.7.4.-
contig_1	Pyrodigal	gene	725628	726470	.	+	.	ID=GCA000160335_00665_gene;locus_tag=GCA000160335_00665;gene=lgt
contig_1	Pyrodigal	CDS	725628	726470	.	+	0	ID=GCA000160335_00665;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000160335_00665;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0009249,GO:0016020,GO:0042158;gene=lgt;Parent=GCA000160335_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_000508984.1,SO:0001217,UniParc:UPI00003B1502,UniRef:UniRef100_Q6GIN0,UniRef:UniRef50_Q2G044,UniRef:UniRef90_Q2G044;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	726478	726963	.	+	.	ID=GCA000160335_00666_gene;locus_tag=GCA000160335_00666
contig_1	Pyrodigal	CDS	726478	726963	.	+	0	ID=GCA000160335_00666;Name=Putative acetyltransferase SAR0816;locus_tag=GCA000160335_00666;product=Putative acetyltransferase SAR0816;Dbxref=GO:0016746;Parent=GCA000160335_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224791.1,SO:0001217,UniParc:UPI00003B1503,UniRef:UniRef100_Q6GIM9,UniRef:UniRef50_Q5HHQ6,UniRef:UniRef90_Q6GIM9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	726971	728038	.	+	.	ID=GCA000160335_00667_gene;locus_tag=GCA000160335_00667;gene=lapB
contig_1	Pyrodigal	CDS	726971	728038	.	+	0	ID=GCA000160335_00667;Name=lipopolysaccharide assembly protein LapB;locus_tag=GCA000160335_00667;product=lipopolysaccharide assembly protein LapB;gene=lapB;Parent=GCA000160335_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001C405B64
contig_1	Pyrodigal	gene	727983	728411	.	+	.	ID=GCA000160335_00668_gene;locus_tag=GCA000160335_00668
contig_1	Pyrodigal	CDS	727983	728411	.	+	0	ID=GCA000160335_00668;Name=hypothetical protein;locus_tag=GCA000160335_00668;product=hypothetical protein;Parent=GCA000160335_00668_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	728478	729413	.	+	.	ID=GCA000160335_00669_gene;locus_tag=GCA000160335_00669;gene=trxB
contig_1	Pyrodigal	CDS	728478	729413	.	+	0	ID=GCA000160335_00669;Name=thioredoxin-disulfide reductase;locus_tag=GCA000160335_00669;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0005737,GO:0019430,GO:0071949;gene=trxB;Parent=GCA000160335_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K00384,RefSeq:WP_000134963.1,SO:0001217,UniParc:UPI0000054774,UniRef:UniRef100_Q5HHQ4,UniRef:UniRef50_P80880,UniRef:UniRef90_Q5HHQ4;ec_number=1.8.1.9
contig_1	Infernal	gene	729780	730037	.	+	.	ID=GCA000160335_00670_gene;locus_tag=GCA000160335_00670;gene=S35
contig_1	Infernal	ncRNA	729780	730037	4.7e-16	+	.	ID=GCA000160335_00670;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00670;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00670_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	730181	731092	.	+	.	ID=GCA000160335_00671_gene;locus_tag=GCA000160335_00671;gene=rapZ
contig_1	Pyrodigal	CDS	730181	731092	.	+	0	ID=GCA000160335_00671;Name=RNase adapter RapZ;locus_tag=GCA000160335_00671;product=RNase adapter RapZ;Dbxref=GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000160335_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_000369719.1,SO:0001217,UniParc:UPI00003B1506,UniRef:UniRef100_Q6GIM6,UniRef:UniRef50_Q2G039,UniRef:UniRef90_Q2G039
contig_1	Pyrodigal	gene	731089	732084	.	+	.	ID=GCA000160335_00672_gene;locus_tag=GCA000160335_00672;gene=cofD
contig_1	Pyrodigal	CDS	731089	732084	.	+	0	ID=GCA000160335_00672;Name=Gluconeogenesis factor;locus_tag=GCA000160335_00672;product=Gluconeogenesis factor;gene=cofD;Parent=GCA000160335_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0391,COG:GH,RefSeq:WP_001248939.1,SO:0001217,UniParc:UPI000005476F,UniRef:UniRef100_Q2G038,UniRef:UniRef50_A0A0U1MHM9,UniRef:UniRef90_A0A0U1MHM9
contig_1	Pyrodigal	gene	732193	733137	.	+	.	ID=GCA000160335_00673_gene;locus_tag=GCA000160335_00673;gene=whiA
contig_1	Pyrodigal	CDS	732193	733137	.	+	0	ID=GCA000160335_00673;Name=DNA-binding protein WhiA;locus_tag=GCA000160335_00673;product=DNA-binding protein WhiA;Dbxref=GO:0003677,GO:0043937,GO:0051301;gene=whiA;Parent=GCA000160335_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1481,COG:K,RefSeq:WP_000006551.1,SO:0001217,UniParc:UPI000005476E,UniRef:UniRef100_Q2G037,UniRef:UniRef50_O06975,UniRef:UniRef90_Q2G037
contig_1	tRNAscan-SE	gene	733447	733518	.	-	.	ID=GCA000160335_00674_gene;locus_tag=GCA000160335_00674;gene=trnR;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	733447	733518	.	-	.	ID=GCA000160335_00674;Name=tRNA-Arg(ccg);locus_tag=GCA000160335_00674;product=tRNA-Arg(ccg);gene=trnR;pseudogene=unknown;anti_codon=ccg;amino_acid=Arg;Parent=GCA000160335_00674_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	733706	734293	.	+	.	ID=GCA000160335_00675_gene;locus_tag=GCA000160335_00675;gene=clpP
contig_1	Pyrodigal	CDS	733706	734293	.	+	0	ID=GCA000160335_00675;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA000160335_00675;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117;gene=clpP;Parent=GCA000160335_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_001049165.1,SO:0001217,UniParc:UPI000005476D,UniRef:UniRef100_Q2G036,UniRef:UniRef50_P80244,UniRef:UniRef90_Q2G036;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	734475	736109	.	+	.	ID=GCA000160335_00676_gene;locus_tag=GCA000160335_00676
contig_1	Pyrodigal	CDS	734475	736109	.	+	0	ID=GCA000160335_00676;Name=malolactic enzyme;locus_tag=GCA000160335_00676;product=malolactic enzyme;Dbxref=GO:0043464,GO:0043883;Parent=GCA000160335_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000675909.1,SO:0001217,UniParc:UPI00003B1507,UniRef:UniRef100_A0A169AUR0,UniRef:UniRef50_Q48796,UniRef:UniRef90_A0A0U1MG66;ec_number=4.1.1.101
contig_1	Pyrodigal	gene	736316	737218	.	-	.	ID=GCA000160335_00677_gene;locus_tag=GCA000160335_00677;gene=yfcH
contig_1	Pyrodigal	CDS	736316	737218	.	-	0	ID=GCA000160335_00677;Name=Epimerase family protein SAUSA300_0753;locus_tag=GCA000160335_00677;product=Epimerase family protein SAUSA300_0753;gene=yfcH;Parent=GCA000160335_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,RefSeq:WP_000816311.1,SO:0001217,UniParc:UPI00003B1508,UniRef:UniRef100_Q6GIM1,UniRef:UniRef50_Q2G035,UniRef:UniRef90_Q2G035
contig_1	Infernal	gene	737367	737490	.	+	.	ID=GCA000160335_00678_gene;locus_tag=GCA000160335_00678;gene=rsaH
contig_1	Infernal	ncRNA	737367	737490	6.9e-21	+	.	ID=GCA000160335_00678;Name=RNA Staph. aureus H;locus_tag=GCA000160335_00678;gene=rsaH;product=RNA Staph. aureus H;Dbxref=RFAM:RF01821;Parent=GCA000160335_00678_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01821
contig_1	Pyrodigal	gene	737921	738550	.	+	.	ID=GCA000160335_00679_gene;locus_tag=GCA000160335_00679
contig_1	Pyrodigal	CDS	737921	738550	.	+	0	ID=GCA000160335_00679;Name=DUF4887 domain-containing protein;locus_tag=GCA000160335_00679;product=DUF4887 domain-containing protein;Parent=GCA000160335_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070826.1,SO:0001217,UniParc:UPI00003B1509,UniRef:UniRef100_Q2G034,UniRef:UniRef50_Q2G034,UniRef:UniRef90_Q2G034
contig_1	Pyrodigal	gene	739044	740057	.	+	.	ID=GCA000160335_00680_gene;locus_tag=GCA000160335_00680;gene=deoR
contig_1	Pyrodigal	CDS	739044	740057	.	+	0	ID=GCA000160335_00680;Name=Central glycolytic genes regulator;locus_tag=GCA000160335_00680;product=Central glycolytic genes regulator;gene=deoR;Parent=GCA000160335_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,RefSeq:WP_000654027.1,SO:0001217,UniParc:UPI00003B150A,UniRef:UniRef100_A0A7Z7QXJ9,UniRef:UniRef50_A0A7V7VIG1,UniRef:UniRef90_A0A7Z1N475
contig_1	Pyrodigal	gene	740110	741120	.	+	.	ID=GCA000160335_00681_gene;locus_tag=GCA000160335_00681;gene=gap
contig_1	Pyrodigal	CDS	740110	741120	.	+	0	ID=GCA000160335_00681;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000160335_00681;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000160335_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000279414.1,SO:0001217,UniParc:UPI000005229B,UniRef:UniRef100_Q5HHP5,UniRef:UniRef50_O52631,UniRef:UniRef90_Q5HQV4;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	741259	742449	.	+	.	ID=GCA000160335_00682_gene;locus_tag=GCA000160335_00682;gene=pgk
contig_1	Pyrodigal	CDS	741259	742449	.	+	0	ID=GCA000160335_00682;Name=Phosphoglycerate kinase;locus_tag=GCA000160335_00682;product=Phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA000160335_00682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_001074749.1,SO:0001217,UniParc:UPI0000054769,UniRef:UniRef100_Q2G031,UniRef:UniRef50_Q8Y4I2,UniRef:UniRef90_Q2G031;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	742571	743332	.	+	.	ID=GCA000160335_00683_gene;locus_tag=GCA000160335_00683;gene=tpiA
contig_1	Pyrodigal	CDS	742571	743332	.	+	0	ID=GCA000160335_00683;Name=triose-phosphate isomerase;locus_tag=GCA000160335_00683;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000160335_00683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,KEGG:K01803,RefSeq:WP_001260089.1,SO:0001217,UniParc:UPI000013722C,UniRef:UniRef100_Q2FIL9,UniRef:UniRef50_Q5XD48,UniRef:UniRef90_Q2G030;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	743335	744852	.	+	.	ID=GCA000160335_00684_gene;locus_tag=GCA000160335_00684;gene=gpmI
contig_1	Pyrodigal	CDS	743335	744852	.	+	0	ID=GCA000160335_00684;Name=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;locus_tag=GCA000160335_00684;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;Dbxref=GO:0005829,GO:0006007,GO:0006096,GO:0030145,GO:0046537;gene=gpmI;Parent=GCA000160335_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0696,COG:G,KEGG:K15633,RefSeq:WP_001085499.1,SO:0001217,UniParc:UPI0001B700D0,UniRef:UniRef100_UPI0001B700D0,UniRef:UniRef50_P64269,UniRef:UniRef90_P64269;ec_number=5.4.2.12
contig_1	Pyrodigal	gene	744982	746286	.	+	.	ID=GCA000160335_00685_gene;locus_tag=GCA000160335_00685;gene=eno
contig_1	Pyrodigal	CDS	744982	746286	.	+	0	ID=GCA000160335_00685;Name=phosphopyruvate hydratase;locus_tag=GCA000160335_00685;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000160335_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_001121760.1,SO:0001217,UniParc:UPI0000054764,UniRef:UniRef100_Q2G028,UniRef:UniRef50_Q97QS2,UniRef:UniRef90_O69174;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	746623	747081	.	+	.	ID=GCA000160335_00686_gene;locus_tag=GCA000160335_00686
contig_1	Pyrodigal	CDS	746623	747081	.	+	0	ID=GCA000160335_00686;Name=DUF2127 domain-containing protein;locus_tag=GCA000160335_00686;product=DUF2127 domain-containing protein;Parent=GCA000160335_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000228398.1,SO:0001217,UniParc:UPI0001B700D1,UniRef:UniRef100_UPI0001B700D1,UniRef:UniRef50_Q2G027,UniRef:UniRef90_Q2G027
contig_1	Pyrodigal	gene	747148	747381	.	+	.	ID=GCA000160335_00687_gene;locus_tag=GCA000160335_00687;gene=secG
contig_1	Pyrodigal	CDS	747148	747381	.	+	0	ID=GCA000160335_00687;Name=preprotein translocase subunit SecG;locus_tag=GCA000160335_00687;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0043952,GO:0065002;gene=secG;Parent=GCA000160335_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_000556760.1,SO:0001217,UniParc:UPI00000D77CD,UniRef:UniRef100_Q2G026,UniRef:UniRef50_Q2G026,UniRef:UniRef90_Q2G026
contig_1	Pyrodigal	gene	747510	748250	.	+	.	ID=GCA000160335_00688_gene;locus_tag=GCA000160335_00688;gene=yvaK
contig_1	Pyrodigal	CDS	747510	748250	.	+	0	ID=GCA000160335_00688;Name=Carboxylesterase%2C putative;locus_tag=GCA000160335_00688;product=Carboxylesterase%2C putative;gene=yvaK;Parent=GCA000160335_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001165967.1,SO:0001217,UniParc:UPI00003B150E,UniRef:UniRef100_A0A7Z7QYE5,UniRef:UniRef50_Q2G025,UniRef:UniRef90_Q2G025
contig_1	Pyrodigal	gene	748284	750656	.	+	.	ID=GCA000160335_00689_gene;locus_tag=GCA000160335_00689;gene=rnr
contig_1	Pyrodigal	CDS	748284	750656	.	+	0	ID=GCA000160335_00689;Name=ribonuclease R;locus_tag=GCA000160335_00689;product=ribonuclease R;Dbxref=GO:0003723,GO:0004518;gene=rnr;Parent=GCA000160335_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_001050041.1,SO:0001217,UniParc:UPI00003B150F,UniRef:UniRef100_A0A7Z7QY34,UniRef:UniRef50_O32231,UniRef:UniRef90_A0A7Z7QY34;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	750678	751142	.	+	.	ID=GCA000160335_00690_gene;locus_tag=GCA000160335_00690;gene=smpB
contig_1	Pyrodigal	CDS	750678	751142	.	+	0	ID=GCA000160335_00690;Name=SsrA-binding protein SmpB;locus_tag=GCA000160335_00690;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000160335_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_001085185.1,SO:0001217,UniParc:UPI000005475F,UniRef:UniRef100_Q2G023,UniRef:UniRef50_C4L5G5,UniRef:UniRef90_P66862
contig_1	Aragorn	gene	751233	751591	.	+	.	ID=GCA000160335_00691_gene;locus_tag=GCA000160335_00691;gene=ssrA
contig_1	Aragorn	tmRNA	751233	751591	.	+	.	ID=GCA000160335_00691;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000160335_00691;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=751326..751361;Parent=GCA000160335_00691_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	752108	752722	.	+	.	ID=GCA000160335_00692_gene;locus_tag=GCA000160335_00692
contig_1	Pyrodigal	CDS	752108	752722	.	+	0	ID=GCA000160335_00692;Name=Stage II sporulation protein M;locus_tag=GCA000160335_00692;product=Stage II sporulation protein M;Parent=GCA000160335_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06384,RefSeq:WP_000999096.1,SO:0001217,UniParc:UPI00003B1510,UniRef:UniRef100_A0A7Z7W167,UniRef:UniRef50_A0A6A9GWE6,UniRef:UniRef90_A0A6A9GWE6
contig_1	Pyrodigal	gene	753010	753738	.	-	.	ID=GCA000160335_00693_gene;locus_tag=GCA000160335_00693
contig_1	Pyrodigal	CDS	753010	753738	.	-	0	ID=GCA000160335_00693;Name=DUF5067 domain-containing protein;locus_tag=GCA000160335_00693;product=DUF5067 domain-containing protein;Parent=GCA000160335_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001574560.1,SO:0001217,UniParc:UPI00003B1511,UniRef:UniRef100_A0AAJ4YVZ0,UniRef:UniRef50_Q2G019,UniRef:UniRef90_Q2G019
contig_1	Pyrodigal	gene	754335	754856	.	+	.	ID=GCA000160335_00694_gene;locus_tag=GCA000160335_00694
contig_1	Pyrodigal	CDS	754335	754856	.	+	0	ID=GCA000160335_00694;Name=SMODS-associated and fused to various effectors domain-containing protein;locus_tag=GCA000160335_00694;product=SMODS-associated and fused to various effectors domain-containing protein;Parent=GCA000160335_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000608187.1,SO:0001217,UniParc:UPI00003B1512,UniRef:UniRef100_A0A0E1X914,UniRef:UniRef50_K9AW58,UniRef:UniRef90_Q2G017
contig_1	Pyrodigal	gene	754995	755525	.	+	.	ID=GCA000160335_00695_gene;locus_tag=GCA000160335_00695;gene=yhbS
contig_1	Pyrodigal	CDS	754995	755525	.	+	0	ID=GCA000160335_00695;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00695;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000160335_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001167165.1,SO:0001217,UniParc:UPI00003B1513,UniRef:UniRef100_A0A7Z7QXK8,UniRef:UniRef50_Q2G016,UniRef:UniRef90_Q2G016
contig_1	Pyrodigal	gene	755789	758806	.	+	.	ID=GCA000160335_00696_gene;locus_tag=GCA000160335_00696;gene=clfA
contig_1	Pyrodigal	CDS	755789	758806	.	+	0	ID=GCA000160335_00696;Name=MSCRAMM family adhesin clumping factor ClfA;locus_tag=GCA000160335_00696;product=MSCRAMM family adhesin clumping factor ClfA;Dbxref=GO:0005576,GO:0007155;gene=clfA;Parent=GCA000160335_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001056321.1,SO:0001217,UniParc:UPI0001B700D2,UniRef:UniRef100_UPI0001B700D2,UniRef:UniRef50_Q2G015,UniRef:UniRef90_Q6GIK4
contig_1	Pyrodigal	gene	759027	760535	.	+	.	ID=GCA000160335_00697_gene;locus_tag=GCA000160335_00697;gene=vwb
contig_1	Pyrodigal	CDS	759027	760535	.	+	0	ID=GCA000160335_00697;Name=von Willebrand factor binding protein Vwb;locus_tag=GCA000160335_00697;product=von Willebrand factor binding protein Vwb;gene=vwb;Parent=GCA000160335_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791710.1,SO:0001217,UniParc:UPI00019F4D2E,UniRef:UniRef100_A0A7Z7QXF0,UniRef:UniRef50_E2FZT0,UniRef:UniRef90_A0A6A8FET9
contig_1	Pyrodigal	gene	760886	761911	.	+	.	ID=GCA000160335_00698_gene;locus_tag=GCA000160335_00698;gene=emp
contig_1	Pyrodigal	CDS	760886	761911	.	+	0	ID=GCA000160335_00698;Name=extracellular matrix protein-binding adhesin Emp;locus_tag=GCA000160335_00698;product=extracellular matrix protein-binding adhesin Emp;gene=emp;Parent=GCA000160335_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000727726,BlastRules:WP_000728056,BlastRules:WP_031788349,BlastRules:WP_047447833,RefSeq:WP_000728052.1,SO:0001217,UniParc:UPI00003B1515,UniRef:UniRef100_A0A166DEL7,UniRef:UniRef50_P0C6P1,UniRef:UniRef90_A0A166DEL7
contig_1	Pyrodigal	gene	762242	762799	.	+	.	ID=GCA000160335_00699_gene;locus_tag=GCA000160335_00699
contig_1	Pyrodigal	CDS	762242	762799	.	+	0	ID=GCA000160335_00699;Name=Extracellular matrix and plasma binding protein;locus_tag=GCA000160335_00699;product=Extracellular matrix and plasma binding protein;Parent=GCA000160335_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824491.1,SO:0001217,UniParc:UPI00003B1516,UniRef:UniRef100_A0AAJ5CSE2,UniRef:UniRef50_Q2G011,UniRef:UniRef90_A0A5S9I325
contig_1	Pyrodigal	gene	763140	763826	.	+	.	ID=GCA000160335_00700_gene;locus_tag=GCA000160335_00700;gene=nuc
contig_1	Pyrodigal	CDS	763140	763826	.	+	0	ID=GCA000160335_00700;Name=Thermonuclease;locus_tag=GCA000160335_00700;product=Thermonuclease;Dbxref=GO:0003676,GO:0005576,GO:0016894,GO:0046872;gene=nuc;Parent=GCA000160335_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_001574556.1,SO:0001217,UniParc:UPI00019CD66A,UniRef:UniRef100_A0A7Z7QXF9,UniRef:UniRef50_P00644,UniRef:UniRef90_P00644;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	764183	764383	.	+	.	ID=GCA000160335_00701_gene;locus_tag=GCA000160335_00701;gene=cspA
contig_1	Pyrodigal	CDS	764183	764383	.	+	0	ID=GCA000160335_00701;Name=Cold shock protein CspA;locus_tag=GCA000160335_00701;product=Cold shock protein CspA;gene=cspA;Parent=GCA000160335_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059082.1,SO:0001217,UniParc:UPI0000054751,UniRef:UniRef100_Q2G009,UniRef:UniRef50_A0A2X3Z2C5,UniRef:UniRef90_Q2G009
contig_1	Pyrodigal	gene	764880	765098	.	-	.	ID=GCA000160335_00702_gene;locus_tag=GCA000160335_00702
contig_1	Pyrodigal	CDS	764880	765098	.	-	0	ID=GCA000160335_00702;Name=hypothetical protein;locus_tag=GCA000160335_00702;product=hypothetical protein;Parent=GCA000160335_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000005879.1,SO:0001217,UniParc:UPI00003B1518,UniRef:UniRef100_A0A7Z7QYF6,UniRef:UniRef50_Q2G008,UniRef:UniRef90_Q2G008
contig_1	Pyrodigal	gene	765160	765444	.	-	.	ID=GCA000160335_00703_gene;locus_tag=GCA000160335_00703
contig_1	Pyrodigal	CDS	765160	765444	.	-	0	ID=GCA000160335_00703;Name=Phage protein;locus_tag=GCA000160335_00703;product=Phage protein;Parent=GCA000160335_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001004401.1,SO:0001217,UniParc:UPI00000D9D20,UniRef:UniRef100_A0A7Z7QY45,UniRef:UniRef50_Q2G007,UniRef:UniRef90_Q2G007
contig_1	Pyrodigal	gene	765532	766101	.	-	.	ID=GCA000160335_00704_gene;locus_tag=GCA000160335_00704;gene=lnsA
contig_1	Pyrodigal	CDS	765532	766101	.	-	0	ID=GCA000160335_00704;Name=lipoprotein N-acylation protein LnsA;locus_tag=GCA000160335_00704;product=lipoprotein N-acylation protein LnsA;gene=lnsA;Parent=GCA000160335_00704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3863,COG:S,KEGG:K27957,RefSeq:WP_001106663.1,SO:0001217,UniParc:UPI00003B1519,UniRef:UniRef100_A0A7Z7W129,UniRef:UniRef50_A0A1J3ZZ65,UniRef:UniRef90_Q2G006;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	766289	766477	.	-	.	ID=GCA000160335_00705_gene;locus_tag=GCA000160335_00705;gene=tsaT
contig_1	Pyrodigal	CDS	766289	766477	.	-	0	ID=GCA000160335_00705;Name=type II toxin-antitoxin system toxin TsaT;locus_tag=GCA000160335_00705;product=type II toxin-antitoxin system toxin TsaT;Dbxref=GO:0090729,GO:0110001;gene=tsaT;Parent=GCA000160335_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000052076.1,SO:0001217,UniParc:UPI00000D77FC,UniRef:UniRef100_A0A7Z7W171,UniRef:UniRef50_Q2G005,UniRef:UniRef90_Q2G005
contig_1	Pyrodigal	gene	766506	766766	.	-	.	ID=GCA000160335_00706_gene;locus_tag=GCA000160335_00706;gene=tsaA
contig_1	Pyrodigal	CDS	766506	766766	.	-	0	ID=GCA000160335_00706;Name=type II toxin-antitoxin system antitoxin TsaA;locus_tag=GCA000160335_00706;product=type II toxin-antitoxin system antitoxin TsaA;Dbxref=GO:0110001;gene=tsaA;Parent=GCA000160335_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001059690.1,SO:0001217,UniParc:UPI00000D774E,UniRef:UniRef100_Q2G004,UniRef:UniRef50_Q2G004,UniRef:UniRef90_Q2G004
contig_1	Pyrodigal	gene	767107	767310	.	+	.	ID=GCA000160335_00707_gene;locus_tag=GCA000160335_00707;gene=yozE
contig_1	Pyrodigal	CDS	767107	767310	.	+	0	ID=GCA000160335_00707;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000160335_00707;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000160335_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145163.1,SO:0001217,UniParc:UPI000005474D,UniRef:UniRef100_Q2G003,UniRef:UniRef50_Q2G003,UniRef:UniRef90_Q2G003
contig_1	Pyrodigal	gene	767307	767543	.	-	.	ID=GCA000160335_00708_gene;locus_tag=GCA000160335_00708
contig_1	Pyrodigal	CDS	767307	767543	.	-	0	ID=GCA000160335_00708;Name=CobW/HypB/UreG nucleotide-binding domain-containing protein;locus_tag=GCA000160335_00708;product=CobW/HypB/UreG nucleotide-binding domain-containing protein;Parent=GCA000160335_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000368687.1,SO:0001217,UniParc:UPI00000D9D21,UniRef:UniRef100_Q2G1T2,UniRef:UniRef50_A0A9X4L8V2,UniRef:UniRef90_Q2G1T2
contig_1	Pyrodigal	gene	767765	768349	.	+	.	ID=GCA000160335_00709_gene;locus_tag=GCA000160335_00709;gene=phoE
contig_1	Pyrodigal	CDS	767765	768349	.	+	0	ID=GCA000160335_00709;Name=Phosphoglycerate mutase;locus_tag=GCA000160335_00709;product=Phosphoglycerate mutase;gene=phoE;Parent=GCA000160335_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,SO:0001217,UniParc:UPI0002C9EFA0,UniRef:UniRef100_A0A0U1MHV8,UniRef:UniRef50_A0A0E8GAD0,UniRef:UniRef90_A0A0E8GAD0
contig_1	Pyrodigal	gene	768422	769039	.	-	.	ID=GCA000160335_00710_gene;locus_tag=GCA000160335_00710;gene=argO
contig_1	Pyrodigal	CDS	768422	769039	.	-	0	ID=GCA000160335_00710;Name=Amino acid transporter;locus_tag=GCA000160335_00710;product=Amino acid transporter;gene=argO;Parent=GCA000160335_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1279,COG:E,KEGG:K06895,RefSeq:WP_000255542.1,SO:0001217,UniParc:UPI0001B702A4,UniRef:UniRef100_UPI0001B702A4,UniRef:UniRef50_Q2G1T0,UniRef:UniRef90_Q2G1T0
contig_1	Pyrodigal	gene	769195	769689	.	-	.	ID=GCA000160335_00711_gene;locus_tag=GCA000160335_00711
contig_1	Pyrodigal	CDS	769195	769689	.	-	0	ID=GCA000160335_00711;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_00711;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000569884.1,SO:0001217,UniParc:UPI0000054749,UniRef:UniRef100_Q2G1T4,UniRef:UniRef50_Q2G1T4,UniRef:UniRef90_Q2G1T4
contig_1	Pyrodigal	gene	770088	770510	.	-	.	ID=GCA000160335_00712_gene;locus_tag=GCA000160335_00712;gene=osmC
contig_1	Pyrodigal	CDS	770088	770510	.	-	0	ID=GCA000160335_00712;Name=Organic hydroperoxide resistance protein-like;locus_tag=GCA000160335_00712;product=Organic hydroperoxide resistance protein-like;Dbxref=GO:0006979;gene=osmC;Parent=GCA000160335_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,KEGG:K04063,RefSeq:WP_000974455.1,SO:0001217,UniParc:UPI00003B151B,UniRef:UniRef100_Q6GII8,UniRef:UniRef50_Q49W40,UniRef:UniRef90_Q2G1T3;ec_number=1.11.1.28
contig_1	Pyrodigal	gene	770658	771374	.	+	.	ID=GCA000160335_00713_gene;locus_tag=GCA000160335_00713;gene=aroD
contig_1	Pyrodigal	CDS	770658	771374	.	+	0	ID=GCA000160335_00713;Name=3-dehydroquinate dehydratase;locus_tag=GCA000160335_00713;product=3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0008652,GO:0009073,GO:0009423,GO:0046279;gene=aroD;Parent=GCA000160335_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0710,COG:E,RefSeq:WP_000150025.1,SO:0001217,UniParc:UPI00019F4D2B,UniRef:UniRef100_UPI00019F4D2B,UniRef:UniRef50_Q6GII7,UniRef:UniRef90_Q6GII7;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	771457	771996	.	+	.	ID=GCA000160335_00714_gene;locus_tag=GCA000160335_00714;gene=nfnB
contig_1	Pyrodigal	CDS	771457	771996	.	+	0	ID=GCA000160335_00714;Name=Nitroreductase domain-containing protein;locus_tag=GCA000160335_00714;product=Nitroreductase domain-containing protein;gene=nfnB;Parent=GCA000160335_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000422908.1,SO:0001217,UniParc:UPI0000054746,UniRef:UniRef100_Q2G001,UniRef:UniRef50_Q2G001,UniRef:UniRef90_Q2G001
contig_1	Pyrodigal	gene	772146	772466	.	-	.	ID=GCA000160335_00715_gene;locus_tag=GCA000160335_00715;gene=trxA
contig_1	Pyrodigal	CDS	772146	772466	.	-	0	ID=GCA000160335_00715;Name=Putative thioredoxin or thiol-disulfide isomerase;locus_tag=GCA000160335_00715;product=Putative thioredoxin or thiol-disulfide isomerase;gene=trxA;Parent=GCA000160335_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_001147955.1,SO:0001217,UniParc:UPI00003B151D,UniRef:UniRef100_A0A7Z7QY14,UniRef:UniRef50_A0A0U1MGB8,UniRef:UniRef90_A0A0U1MGB8
contig_1	Pyrodigal	gene	772610	772966	.	+	.	ID=GCA000160335_00716_gene;locus_tag=GCA000160335_00716;gene=arsC
contig_1	Pyrodigal	CDS	772610	772966	.	+	0	ID=GCA000160335_00716;Name=Arsenate reductase;locus_tag=GCA000160335_00716;product=Arsenate reductase;gene=arsC;Parent=GCA000160335_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_000589549.1,SO:0001217,UniParc:UPI0000054744,UniRef:UniRef100_Q2FZZ9,UniRef:UniRef50_A0A1D4Q7A2,UniRef:UniRef90_A0AAE8TJ65
contig_1	Pyrodigal	gene	773124	773504	.	+	.	ID=GCA000160335_00717_gene;locus_tag=GCA000160335_00717;gene=gcvH
contig_1	Pyrodigal	CDS	773124	773504	.	+	0	ID=GCA000160335_00717;Name=glycine cleavage system protein GcvH;locus_tag=GCA000160335_00717;product=glycine cleavage system protein GcvH;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000160335_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000290491.1,SO:0001217,UniParc:UPI000012B33B,UniRef:UniRef100_P64213,UniRef:UniRef50_P64213,UniRef:UniRef90_P64213
contig_1	Pyrodigal	gene	773568	774560	.	+	.	ID=GCA000160335_00718_gene;locus_tag=GCA000160335_00718
contig_1	Pyrodigal	CDS	773568	774560	.	+	0	ID=GCA000160335_00718;Name=DUF1963 domain-containing protein;locus_tag=GCA000160335_00718;product=DUF1963 domain-containing protein;Parent=GCA000160335_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FZZ6,UniRef:UniRef90_Q2FZZ6
contig_1	Infernal	gene	774734	774984	.	+	.	ID=GCA000160335_00719_gene;locus_tag=GCA000160335_00719;gene=S35
contig_1	Infernal	ncRNA	774734	774984	4.3e-15	+	.	ID=GCA000160335_00719;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00719;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00719_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	775147	775536	.	+	.	ID=GCA000160335_00720_gene;locus_tag=GCA000160335_00720;gene=rnmV
contig_1	Pyrodigal	CDS	775147	775536	.	+	0	ID=GCA000160335_00720;Name=Toprim domain-containing protein;locus_tag=GCA000160335_00720;product=Toprim domain-containing protein;gene=rnmV;Parent=GCA000160335_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1658,COG:J,SO:0001217,UniParc:UPI0001B7010A,UniRef:UniRef100_A0A0E1X7B6,UniRef:UniRef50_A0A1E5LDX5,UniRef:UniRef90_Q2FZZ4
contig_1	Pyrodigal	gene	775529	775825	.	+	.	ID=GCA000160335_00721_gene;locus_tag=GCA000160335_00721
contig_1	Pyrodigal	CDS	775529	775825	.	+	0	ID=GCA000160335_00721;Name=Thioredoxin domain-containing protein;locus_tag=GCA000160335_00721;product=Thioredoxin domain-containing protein;Parent=GCA000160335_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065804.1,SO:0001217,UniParc:UPI00019CD639,UniRef:UniRef100_A0A7Z7W176,UniRef:UniRef50_Q2FZZ3,UniRef:UniRef90_Q2FZZ3
contig_1	Infernal	regulatory_region	775883	775986	3.5e-15	+	.	ID=HBCHLJIIAO_156;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	776075	777100	.	+	.	ID=GCA000160335_00722_gene;locus_tag=GCA000160335_00722;gene=metN2
contig_1	Pyrodigal	CDS	776075	777100	.	+	0	ID=GCA000160335_00722;Name=Methionine import ATP-binding protein MetN 2;locus_tag=GCA000160335_00722;product=Methionine import ATP-binding protein MetN 2;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN2;Parent=GCA000160335_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000571222.1,SO:0001217,UniParc:UPI0001B7010B,UniRef:UniRef100_UPI0001B7010B,UniRef:UniRef50_Q99VG8,UniRef:UniRef90_Q99VG8;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	777093	777788	.	+	.	ID=GCA000160335_00723_gene;locus_tag=GCA000160335_00723;gene=metP
contig_1	Pyrodigal	CDS	777093	777788	.	+	0	ID=GCA000160335_00723;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000160335_00723;product=ABC transmembrane type-1 domain-containing protein;gene=metP;Parent=GCA000160335_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000520233.1,SO:0001217,UniParc:UPI000005473C,UniRef:UniRef100_Q2FZZ1,UniRef:UniRef50_O32168,UniRef:UniRef90_Q2FZZ1
contig_1	Pyrodigal	gene	777806	778627	.	+	.	ID=GCA000160335_00724_gene;locus_tag=GCA000160335_00724;gene=nlpA
contig_1	Pyrodigal	CDS	777806	778627	.	+	0	ID=GCA000160335_00724;Name=Lipoprotein;locus_tag=GCA000160335_00724;product=Lipoprotein;gene=nlpA;Parent=GCA000160335_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_000732338.1,SO:0001217,UniParc:UPI00003B1522,UniRef:UniRef100_A0A7Z7W284,UniRef:UniRef50_A0A380G8D6,UniRef:UniRef90_A0A0U1MGY2
contig_1	Pyrodigal	gene	778770	779990	.	-	.	ID=GCA000160335_00725_gene;locus_tag=GCA000160335_00725
contig_1	Pyrodigal	CDS	778770	779990	.	-	0	ID=GCA000160335_00725;Name=Int protein;locus_tag=GCA000160335_00725;product=Int protein;Parent=GCA000160335_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000270271.1,SO:0001217,UniParc:UPI0001B3AA80,UniRef:UniRef100_A0A658BIR2,UniRef:UniRef50_A0A0C6DXB6,UniRef:UniRef90_A0A0C6DXB6
contig_1	Pyrodigal	gene	780004	781392	.	-	.	ID=GCA000160335_00726_gene;locus_tag=GCA000160335_00726
contig_1	Pyrodigal	CDS	780004	781392	.	-	0	ID=GCA000160335_00726;Name=SAP domain-containing protein;locus_tag=GCA000160335_00726;product=SAP domain-containing protein;Parent=GCA000160335_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025173845.1,SO:0001217,UniParc:UPI000312045E,UniRef:UniRef100_A0A6B0BSY4,UniRef:UniRef50_A0A5S9EUS6,UniRef:UniRef90_A0A5S9EUS6
contig_1	Pyrodigal	gene	781419	781991	.	-	.	ID=GCA000160335_00727_gene;locus_tag=GCA000160335_00727
contig_1	Pyrodigal	CDS	781419	781991	.	-	0	ID=GCA000160335_00727;Name=Transcriptional regulator;locus_tag=GCA000160335_00727;product=Transcriptional regulator;Parent=GCA000160335_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001661454.1,SO:0001217,UniParc:UPI00019F4D26,UniRef:UniRef100_A0A133PWY1,UniRef:UniRef50_A0A853V0T6,UniRef:UniRef90_A0A853V0T6
contig_1	Pyrodigal	gene	782163	782384	.	+	.	ID=GCA000160335_00728_gene;locus_tag=GCA000160335_00728
contig_1	Pyrodigal	CDS	782163	782384	.	+	0	ID=GCA000160335_00728;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000160335_00728;product=Helix-turn-helix domain-containing protein;Parent=GCA000160335_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000560872.1,SO:0001217,UniParc:UPI00019F4D25,UniRef:UniRef100_X5IX04,UniRef:UniRef50_X5IX04,UniRef:UniRef90_X5IX04
contig_1	Pyrodigal	gene	782385	782657	.	+	.	ID=GCA000160335_00729_gene;locus_tag=GCA000160335_00729
contig_1	Pyrodigal	CDS	782385	782657	.	+	0	ID=GCA000160335_00729;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000160335_00729;product=Helix-turn-helix domain-containing protein;Parent=GCA000160335_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000124597.1,SO:0001217,UniParc:UPI00019F4D24,UniRef:UniRef100_X5IY55,UniRef:UniRef50_X5IY47,UniRef:UniRef90_X5IY55
contig_1	Pyrodigal	gene	782669	782824	.	+	.	ID=GCA000160335_00730_gene;locus_tag=GCA000160335_00730
contig_1	Pyrodigal	CDS	782669	782824	.	+	0	ID=GCA000160335_00730;Name=Pathogenicity island protein;locus_tag=GCA000160335_00730;product=Pathogenicity island protein;Parent=GCA000160335_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784891.1,SO:0001217,UniParc:UPI00021AE6C3,UniRef:UniRef100_A0A380DTI6,UniRef:UniRef50_A0A0U1MQK6,UniRef:UniRef90_A0A0U1MQK6
contig_1	Pyrodigal	gene	782809	783012	.	+	.	ID=GCA000160335_00731_gene;locus_tag=GCA000160335_00731
contig_1	Pyrodigal	CDS	782809	783012	.	+	0	ID=GCA000160335_00731;Name=Pathogenicity island protein;locus_tag=GCA000160335_00731;product=Pathogenicity island protein;Parent=GCA000160335_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001231375.1,SO:0001217,UniParc:UPI00019F4D22,UniRef:UniRef100_A0A2U0IFS1,UniRef:UniRef50_A0A0E1XAY4,UniRef:UniRef90_A0A0E1XAY4
contig_1	Pyrodigal	gene	783014	783397	.	+	.	ID=GCA000160335_00732_gene;locus_tag=GCA000160335_00732
contig_1	Pyrodigal	CDS	783014	783397	.	+	0	ID=GCA000160335_00732;Name=Pathogenicity island protein;locus_tag=GCA000160335_00732;product=Pathogenicity island protein;Parent=GCA000160335_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000695073.1,SO:0001217,UniParc:UPI0001B7010D,UniRef:UniRef100_UPI0001B7010D,UniRef:UniRef50_A0A0C6E6E7,UniRef:UniRef90_A0A6G4ZNW9
contig_1	Pyrodigal	gene	783398	783691	.	+	.	ID=GCA000160335_00733_gene;locus_tag=GCA000160335_00733;gene=tscT
contig_1	Pyrodigal	CDS	783398	783691	.	+	0	ID=GCA000160335_00733;Name=type II toxin-antitoxin system toxin TscT;locus_tag=GCA000160335_00733;product=type II toxin-antitoxin system toxin TscT;Dbxref=GO:0090729,GO:0110001;gene=tscT;Parent=GCA000160335_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001103971.1,SO:0001217,UniParc:UPI00019F4D20,UniRef:UniRef100_UPI00019F4D20,UniRef:UniRef50_A0A0C6DRY8,UniRef:UniRef90_A0A0C6DRY8
contig_1	Pyrodigal	gene	783779	784648	.	+	.	ID=GCA000160335_00734_gene;locus_tag=GCA000160335_00734
contig_1	Pyrodigal	CDS	783779	784648	.	+	0	ID=GCA000160335_00734;Name=Primase C-terminal 1 domain-containing protein;locus_tag=GCA000160335_00734;product=Primase C-terminal 1 domain-containing protein;Parent=GCA000160335_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001002696.1,SO:0001217,UniParc:UPI0001B3AA57,UniRef:UniRef100_A0A2Z6BC04,UniRef:UniRef50_Q4L4M2,UniRef:UniRef90_A0A0H3JMU8
contig_1	Pyrodigal	gene	784662	786371	.	+	.	ID=GCA000160335_00735_gene;locus_tag=GCA000160335_00735
contig_1	Pyrodigal	CDS	784662	786371	.	+	0	ID=GCA000160335_00735;Name=DUF927 domain-containing protein;locus_tag=GCA000160335_00735;product=DUF927 domain-containing protein;Parent=GCA000160335_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5519,COG:R,RefSeq:WP_000447476.1,SO:0001217,UniParc:UPI00019F4D1E,UniRef:UniRef100_K7ZK03,UniRef:UniRef50_A0A0H3JV51,UniRef:UniRef90_A0A0H3JV51
contig_1	Pyrodigal	gene	786701	787081	.	+	.	ID=GCA000160335_00736_gene;locus_tag=GCA000160335_00736
contig_1	Pyrodigal	CDS	786701	787081	.	+	0	ID=GCA000160335_00736;Name=Interference protein with phage growth;locus_tag=GCA000160335_00736;product=Interference protein with phage growth;Parent=GCA000160335_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356930.1,SO:0001217,UniParc:UPI00019F4D1D,UniRef:UniRef100_A0A5S9I3D7,UniRef:UniRef50_K7ZQ57,UniRef:UniRef90_K7ZQ57
contig_1	Pyrodigal	gene	787078	787719	.	+	.	ID=GCA000160335_00737_gene;locus_tag=GCA000160335_00737
contig_1	Pyrodigal	CDS	787078	787719	.	+	0	ID=GCA000160335_00737;Name=Pathogenicity island protein;locus_tag=GCA000160335_00737;product=Pathogenicity island protein;Parent=GCA000160335_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001047696.1,SO:0001217,UniParc:UPI0001B7010E,UniRef:UniRef100_UPI0006B561CE,UniRef:UniRef50_Q4L4M5,UniRef:UniRef90_A0A0H3JR25
contig_1	Pyrodigal	gene	788255	788596	.	+	.	ID=GCA000160335_00738_gene;locus_tag=GCA000160335_00738
contig_1	Pyrodigal	CDS	788255	788596	.	+	0	ID=GCA000160335_00738;Name=Pathogenicity island protein;locus_tag=GCA000160335_00738;product=Pathogenicity island protein;Parent=GCA000160335_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001190615.1,SO:0001217,UniParc:UPI00000D5EFD,UniRef:UniRef100_Q99SM8,UniRef:UniRef50_Q4L4M7,UniRef:UniRef90_K7ZLS3
contig_1	Pyrodigal	gene	788608	789186	.	+	.	ID=GCA000160335_00739_gene;locus_tag=GCA000160335_00739
contig_1	Pyrodigal	CDS	788608	789186	.	+	0	ID=GCA000160335_00739;Name=Pathogenicity island protein;locus_tag=GCA000160335_00739;product=Pathogenicity island protein;Parent=GCA000160335_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846285.1,SO:0001217,UniParc:UPI00000B44CF,UniRef:UniRef100_Q93CE0,UniRef:UniRef50_A0A0H3JTD1,UniRef:UniRef90_A0A0H3JTD1
contig_1	Pyrodigal	gene	789204	789422	.	+	.	ID=GCA000160335_00740_gene;locus_tag=GCA000160335_00740
contig_1	Pyrodigal	CDS	789204	789422	.	+	0	ID=GCA000160335_00740;Name=Pathogenicity island protein;locus_tag=GCA000160335_00740;product=Pathogenicity island protein;Parent=GCA000160335_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000448773.1,SO:0001217,UniParc:UPI00019F4D1B,UniRef:UniRef100_I7GSD1,UniRef:UniRef50_A0A0H3JWD3,UniRef:UniRef90_A0A0H3JWD3
contig_1	Pyrodigal	gene	789473	790000	.	+	.	ID=GCA000160335_00741_gene;locus_tag=GCA000160335_00741;gene=cotF
contig_1	Pyrodigal	CDS	789473	790000	.	+	0	ID=GCA000160335_00741;Name=Spore coat protein;locus_tag=GCA000160335_00741;product=Spore coat protein;gene=cotF;Parent=GCA000160335_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5577,COG:M,RefSeq:WP_000771367.1,SO:0001217,UniParc:UPI00019F4D1A,UniRef:UniRef100_A0A5S9I3P6,UniRef:UniRef50_A0A0U1MQR4,UniRef:UniRef90_A0A0U1MQR4
contig_1	Pyrodigal	gene	790003	790344	.	+	.	ID=GCA000160335_00742_gene;locus_tag=GCA000160335_00742
contig_1	Pyrodigal	CDS	790003	790344	.	+	0	ID=GCA000160335_00742;Name=Transposase;locus_tag=GCA000160335_00742;product=Transposase;Parent=GCA000160335_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4CF6,UniRef:UniRef100_A0A5S9I4P9,UniRef:UniRef50_A0A0H3JQL6,UniRef:UniRef90_A0A0H3JQL6
contig_1	Pyrodigal	gene	790341	790910	.	+	.	ID=GCA000160335_00743_gene;locus_tag=GCA000160335_00743;gene=xtmA
contig_1	Pyrodigal	CDS	790341	790910	.	+	0	ID=GCA000160335_00743;Name=Terminase small subunit;locus_tag=GCA000160335_00743;product=Terminase small subunit;gene=xtmA;Parent=GCA000160335_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3728,COG:X,RefSeq:WP_001293081.1,SO:0001217,UniParc:UPI00019F4CF5,UniRef:UniRef100_A0A898CS89,UniRef:UniRef50_Q4L4N2,UniRef:UniRef90_Q93CE3
contig_1	Pyrodigal	gene	791111	792133	.	+	.	ID=GCA000160335_00744_gene;locus_tag=GCA000160335_00744
contig_1	Pyrodigal	CDS	791111	792133	.	+	0	ID=GCA000160335_00744;Name=Phage protein;locus_tag=GCA000160335_00744;product=Phage protein;Parent=GCA000160335_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794228.1,SO:0001217,UniParc:UPI00019F4CF4,UniRef:UniRef100_UPI0001F23B29,UniRef:UniRef50_A0A653ZGG4,UniRef:UniRef90_A0A653ZGG4
contig_1	Pyrodigal	gene	792152	792715	.	+	.	ID=GCA000160335_00745_gene;locus_tag=GCA000160335_00745
contig_1	Pyrodigal	CDS	792152	792715	.	+	0	ID=GCA000160335_00745;Name=hypothetical protein;locus_tag=GCA000160335_00745;product=hypothetical protein;Parent=GCA000160335_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091245.1,SO:0001217,UniParc:UPI00030B00A5,UniRef:UniRef100_UPI00030B00A5,UniRef:UniRef50_A0A653ZGW2,UniRef:UniRef90_UPI00280217D2
contig_1	Pyrodigal	gene	792964	793518	.	-	.	ID=GCA000160335_00746_gene;locus_tag=GCA000160335_00746
contig_1	Pyrodigal	CDS	792964	793518	.	-	0	ID=GCA000160335_00746;Name=DUF4888 domain-containing protein;locus_tag=GCA000160335_00746;product=DUF4888 domain-containing protein;Parent=GCA000160335_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001035614.1,SO:0001217,UniParc:UPI00019F4CF2,UniRef:UniRef100_UPI001865231E,UniRef:UniRef50_M9NUJ8,UniRef:UniRef90_UPI0007CA3B3D
contig_1	Pyrodigal	gene	793917	794045	.	+	.	ID=GCA000160335_00747_gene;locus_tag=GCA000160335_00747
contig_1	Pyrodigal	CDS	793917	794045	.	+	0	ID=GCA000160335_00747;Name=Phage protein;locus_tag=GCA000160335_00747;product=Phage protein;Parent=GCA000160335_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000884151.1,SO:0001217,UniParc:UPI00000CAEBA,UniRef:UniRef100_A0A0F6N3H2,UniRef:UniRef50_A0A2K4AE04,UniRef:UniRef90_A0A6B5V308
contig_1	Pyrodigal	gene	794116	794226	.	+	.	ID=GCA000160335_00748_gene;locus_tag=GCA000160335_00748
contig_1	Pyrodigal	CDS	794116	794226	.	+	0	ID=GCA000160335_00748;Name=hypothetical protein;locus_tag=GCA000160335_00748;product=hypothetical protein;Parent=GCA000160335_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2K4ADZ9,UniRef:UniRef90_A0A0H3JYK5
contig_1	Pyrodigal	gene	794228	794413	.	+	.	ID=GCA000160335_00749_gene;locus_tag=GCA000160335_00749
contig_1	Pyrodigal	CDS	794228	794413	.	+	0	ID=GCA000160335_00749;Name=XRE family transcriptional regulator;locus_tag=GCA000160335_00749;product=XRE family transcriptional regulator;Parent=GCA000160335_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001286805.1,SO:0001217,UniParc:UPI0000505AC9,UniRef:UniRef100_S4SXF7,UniRef:UniRef50_Q2FYY1,UniRef:UniRef90_S4SXF7
contig_1	Infernal	gene	795264	795515	.	-	.	ID=GCA000160335_00750_gene;locus_tag=GCA000160335_00750;gene=S35
contig_1	Infernal	ncRNA	795264	795515	9.7e-21	-	.	ID=GCA000160335_00750;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00750;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00750_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	795700	795894	.	+	.	ID=GCA000160335_00751_gene;locus_tag=GCA000160335_00751;gene=yjbJ
contig_1	Pyrodigal	CDS	795700	795894	.	+	0	ID=GCA000160335_00751;Name=UPF0337 protein SAR0874;locus_tag=GCA000160335_00751;product=UPF0337 protein SAR0874;gene=yjbJ;Parent=GCA000160335_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752917.1,SO:0001217,UniParc:UPI000005473A,UniRef:UniRef100_Q2FZY9,UniRef:UniRef50_Q2FZY9,UniRef:UniRef90_Q2FZY9
contig_1	Pyrodigal	gene	796128	796979	.	-	.	ID=GCA000160335_00752_gene;locus_tag=GCA000160335_00752;gene=popT
contig_1	Pyrodigal	CDS	796128	796979	.	-	0	ID=GCA000160335_00752;Name=Polyprenyl-phosphate transporter;locus_tag=GCA000160335_00752;product=Polyprenyl-phosphate transporter;Dbxref=GO:0005886,GO:0071555;gene=popT;Parent=GCA000160335_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2035,COG:M,KEGG:K08974,RefSeq:WP_001183862.1,SO:0001217,UniParc:UPI00003B1523,UniRef:UniRef100_A0A7Z7QY33,UniRef:UniRef50_Q2FZY8,UniRef:UniRef90_Q2FZY8
contig_1	Pyrodigal	gene	797307	798068	.	+	.	ID=GCA000160335_00753_gene;locus_tag=GCA000160335_00753;gene=sufC
contig_1	Pyrodigal	CDS	797307	798068	.	+	0	ID=GCA000160335_00753;Name=Fe-S cluster assembly ATPase SufC;locus_tag=GCA000160335_00753;product=Fe-S cluster assembly ATPase SufC;Dbxref=GO:0005524,GO:0016226;gene=sufC;Parent=GCA000160335_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0396,COG:O,RefSeq:WP_000168843.1,SO:0001217,UniParc:UPI0001B701B2,UniRef:UniRef100_UPI0001B701B2,UniRef:UniRef50_A0A1G4NXF9,UniRef:UniRef90_Q5HQQ2
contig_1	Pyrodigal	gene	798166	799473	.	+	.	ID=GCA000160335_00754_gene;locus_tag=GCA000160335_00754;gene=sufD
contig_1	Pyrodigal	CDS	798166	799473	.	+	0	ID=GCA000160335_00754;Name=Fe-S cluster assembly protein SufD;locus_tag=GCA000160335_00754;product=Fe-S cluster assembly protein SufD;Dbxref=GO:0016226;gene=sufD;Parent=GCA000160335_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,KEGG:K09015,RefSeq:WP_000205572.1,SO:0001217,UniParc:UPI000005228C,UniRef:UniRef100_Q2FZY6,UniRef:UniRef50_O32165,UniRef:UniRef90_Q2FZY6
contig_1	Pyrodigal	gene	799588	800829	.	+	.	ID=GCA000160335_00755_gene;locus_tag=GCA000160335_00755;gene=csd
contig_1	Pyrodigal	CDS	799588	800829	.	+	0	ID=GCA000160335_00755;Name=putative cysteine desulfurase;locus_tag=GCA000160335_00755;product=putative cysteine desulfurase;Dbxref=GO:0006534,GO:0030170,GO:0031071;gene=csd;Parent=GCA000160335_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0520,COG:E,SO:0001217,UniParc:UPI00000D9D2B,UniRef:UniRef100_Q5HHH0,UniRef:UniRef50_O32164,UniRef:UniRef90_P63518;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	800819	801283	.	+	.	ID=GCA000160335_00756_gene;locus_tag=GCA000160335_00756;gene=sufU
contig_1	Pyrodigal	CDS	800819	801283	.	+	0	ID=GCA000160335_00756;Name=Fe-S cluster assembly sulfur transfer protein SufU;locus_tag=GCA000160335_00756;product=Fe-S cluster assembly sulfur transfer protein SufU;Dbxref=GO:0005198,GO:0016226;gene=sufU;Parent=GCA000160335_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_001010506.1,SO:0001217,UniParc:UPI0001B70111,UniRef:UniRef100_UPI0001B70111,UniRef:UniRef50_O32163,UniRef:UniRef90_Q2FZY4
contig_1	Pyrodigal	gene	801434	802831	.	+	.	ID=GCA000160335_00757_gene;locus_tag=GCA000160335_00757;gene=sufB
contig_1	Pyrodigal	CDS	801434	802831	.	+	0	ID=GCA000160335_00757;Name=Fe-S cluster assembly protein SufB;locus_tag=GCA000160335_00757;product=Fe-S cluster assembly protein SufB;Dbxref=GO:0016226;gene=sufB;Parent=GCA000160335_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,RefSeq:WP_001074405.1,SO:0001217,UniParc:UPI00000D7837,UniRef:UniRef100_Q2FZY3,UniRef:UniRef50_O32162,UniRef:UniRef90_Q2FZY3
contig_1	Pyrodigal	gene	803163	803477	.	-	.	ID=GCA000160335_00758_gene;locus_tag=GCA000160335_00758
contig_1	Pyrodigal	CDS	803163	803477	.	-	0	ID=GCA000160335_00758;Name=Membrane protein;locus_tag=GCA000160335_00758;product=Membrane protein;Parent=GCA000160335_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000274040.1,SO:0001217,UniParc:UPI00003B1525,UniRef:UniRef100_A0A7Z7QXH8,UniRef:UniRef50_Q2FZY1,UniRef:UniRef90_Q2FZY1
contig_1	Pyrodigal	gene	803846	804886	.	+	.	ID=GCA000160335_00759_gene;locus_tag=GCA000160335_00759;gene=corB
contig_1	Pyrodigal	CDS	803846	804886	.	+	0	ID=GCA000160335_00759;Name=CNNM transmembrane domain-containing protein;locus_tag=GCA000160335_00759;product=CNNM transmembrane domain-containing protein;gene=corB;Parent=GCA000160335_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,RefSeq:WP_000582326.1,SO:0001217,UniParc:UPI00000CAB54,UniRef:UniRef100_A0A7Z7QYH0,UniRef:UniRef50_K0J4R5,UniRef:UniRef90_Q2FZY0
contig_1	Pyrodigal	gene	804900	805967	.	+	.	ID=GCA000160335_00760_gene;locus_tag=GCA000160335_00760;gene=yrpB
contig_1	Pyrodigal	CDS	804900	805967	.	+	0	ID=GCA000160335_00760;Name=putative nitronate monooxygenase;locus_tag=GCA000160335_00760;product=putative nitronate monooxygenase;Dbxref=GO:0000166,GO:0009636,GO:0018580;gene=yrpB;Parent=GCA000160335_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2070,COG:R,RefSeq:WP_000267243.1,SO:0001217,UniParc:UPI00003B1526,UniRef:UniRef100_Q6GIG7,UniRef:UniRef50_Q2FZX9,UniRef:UniRef90_Q2FZX9;ec_number=1.13.12.-
contig_1	Pyrodigal	gene	806224	807072	.	+	.	ID=GCA000160335_00761_gene;locus_tag=GCA000160335_00761;gene=yecE
contig_1	Pyrodigal	CDS	806224	807072	.	+	0	ID=GCA000160335_00761;Name=Cytosolic protein;locus_tag=GCA000160335_00761;product=Cytosolic protein;gene=yecE;Parent=GCA000160335_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1801,COG:R,RefSeq:WP_000608129.1,SO:0001217,UniParc:UPI00000D77D2,UniRef:UniRef100_Q2FZX7,UniRef:UniRef50_A0A0A8JCS6,UniRef:UniRef90_A0A7U7PXU7
contig_1	Pyrodigal	gene	807085	807912	.	+	.	ID=GCA000160335_00762_gene;locus_tag=GCA000160335_00762;gene=tauE
contig_1	Pyrodigal	CDS	807085	807912	.	+	0	ID=GCA000160335_00762;Name=putative membrane transporter protein;locus_tag=GCA000160335_00762;product=putative membrane transporter protein;gene=tauE;Parent=GCA000160335_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000927626.1,SO:0001217,UniParc:UPI00003B1527,UniRef:UniRef100_A0A7Z7W179,UniRef:UniRef50_A0A7U7PY32,UniRef:UniRef90_A0A7U7PY32
contig_1	Pyrodigal	gene	807939	809258	.	+	.	ID=GCA000160335_00763_gene;locus_tag=GCA000160335_00763;gene=ushA
contig_1	Pyrodigal	CDS	807939	809258	.	+	0	ID=GCA000160335_00763;Name=UDP-sugar hydrolase 5-nucleotidase;locus_tag=GCA000160335_00763;product=UDP-sugar hydrolase 5-nucleotidase;gene=ushA;Parent=GCA000160335_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_001241228.1,SO:0001217,UniParc:UPI00003B1528,UniRef:UniRef100_A0A7Z7W1E6,UniRef:UniRef50_A0A2I7Y753,UniRef:UniRef90_A0A2I7Y753
contig_1	Pyrodigal	gene	809342	810259	.	+	.	ID=GCA000160335_00764_gene;locus_tag=GCA000160335_00764;gene=lipA
contig_1	Pyrodigal	CDS	809342	810259	.	+	0	ID=GCA000160335_00764;Name=lipoyl synthase;locus_tag=GCA000160335_00764;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000160335_00764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_000201875.1,SO:0001217,UniParc:UPI000012E6DB,UniRef:UniRef100_Q2FZX4,UniRef:UniRef50_Q2FZX4,UniRef:UniRef90_Q2FZX4;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	810388	810771	.	+	.	ID=GCA000160335_00765_gene;locus_tag=GCA000160335_00765;gene=yutD
contig_1	Pyrodigal	CDS	810388	810771	.	+	0	ID=GCA000160335_00765;Name=DUF1027 domain-containing protein;locus_tag=GCA000160335_00765;product=DUF1027 domain-containing protein;gene=yutD;Parent=GCA000160335_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4470,COG:S,RefSeq:WP_000598444.1,SO:0001217,UniParc:UPI00000D76FB,UniRef:UniRef100_Q2FZX3,UniRef:UniRef50_S2XM05,UniRef:UniRef90_Q2FZX3
contig_1	Pyrodigal	gene	810850	811116	.	-	.	ID=GCA000160335_00766_gene;locus_tag=GCA000160335_00766
contig_1	Pyrodigal	CDS	810850	811116	.	-	0	ID=GCA000160335_00766;Name=Cytosolic protein;locus_tag=GCA000160335_00766;product=Cytosolic protein;Parent=GCA000160335_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566649.1,SO:0001217,UniParc:UPI0000054726,UniRef:UniRef100_Q2FZX2,UniRef:UniRef50_Q2FZX2,UniRef:UniRef90_Q2FZX2
contig_1	Pyrodigal	gene	811214	811648	.	+	.	ID=GCA000160335_00767_gene;locus_tag=GCA000160335_00767;gene=yutE
contig_1	Pyrodigal	CDS	811214	811648	.	+	0	ID=GCA000160335_00767;Name=DUF86 domain-containing protein;locus_tag=GCA000160335_00767;product=DUF86 domain-containing protein;gene=yutE;Parent=GCA000160335_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2445,COG:R,RefSeq:WP_000273979.1,SO:0001217,UniParc:UPI00003B1529,UniRef:UniRef100_A0A0D1IGR7,UniRef:UniRef50_A0A077UTM6,UniRef:UniRef90_A0A077UTM6
contig_1	Pyrodigal	gene	811648	812427	.	+	.	ID=GCA000160335_00768_gene;locus_tag=GCA000160335_00768;gene=nagD
contig_1	Pyrodigal	CDS	811648	812427	.	+	0	ID=GCA000160335_00768;Name=Acid sugar phosphatase;locus_tag=GCA000160335_00768;product=Acid sugar phosphatase;Dbxref=GO:0005737,GO:0016791,GO:0046872;gene=nagD;Parent=GCA000160335_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0647,COG:F,RefSeq:WP_000816182.1,SO:0001217,UniParc:UPI00003B152A,UniRef:UniRef100_Q6GIF9,UniRef:UniRef50_Q2FZX0,UniRef:UniRef90_Q2FZX0;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	812460	813419	.	+	.	ID=GCA000160335_00769_gene;locus_tag=GCA000160335_00769;gene=ldhA
contig_1	Pyrodigal	CDS	812460	813419	.	+	0	ID=GCA000160335_00769;Name=Glyoxylate reductase;locus_tag=GCA000160335_00769;product=Glyoxylate reductase;gene=ldhA;Parent=GCA000160335_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000239139.1,SO:0001217,UniParc:UPI00003B152B,UniRef:UniRef100_A0A7Z7QXN6,UniRef:UniRef50_A0A1W7ABE9,UniRef:UniRef90_A0A0U1MIE0
contig_1	Pyrodigal	gene	813830	813982	.	+	.	ID=GCA000160335_00770_gene;locus_tag=GCA000160335_00770;gene=dltX
contig_1	Pyrodigal	CDS	813830	813982	.	+	0	ID=GCA000160335_00770;Name=Teichoic acid D-Ala incorporation-associated protein DltX;locus_tag=GCA000160335_00770;product=Teichoic acid D-Ala incorporation-associated protein DltX;gene=dltX;Parent=GCA000160335_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000837752.1,SO:0001217,UniParc:UPI00000D78B3,UniRef:UniRef100_Q2FZW7,UniRef:UniRef50_Q2FZW7,UniRef:UniRef90_Q2FZW7
contig_1	Pyrodigal	gene	813998	815455	.	+	.	ID=GCA000160335_00771_gene;locus_tag=GCA000160335_00771;gene=dltA
contig_1	Pyrodigal	CDS	813998	815455	.	+	0	ID=GCA000160335_00771;Name=D-alanine--poly(phosphoribitol) ligase subunit DltA;locus_tag=GCA000160335_00771;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;Dbxref=GO:0005524,GO:0005737,GO:0019350,GO:0047473,GO:0070395;gene=dltA;Parent=GCA000160335_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1020,COG:Q,RefSeq:WP_000129645.1,SO:0001217,UniParc:UPI00003B152C,UniRef:UniRef100_Q6GIF6,UniRef:UniRef50_P68876,UniRef:UniRef90_P68876;ec_number=6.2.1.54
contig_1	Pyrodigal	gene	815452	816666	.	+	.	ID=GCA000160335_00772_gene;locus_tag=GCA000160335_00772;gene=dltB
contig_1	Pyrodigal	CDS	815452	816666	.	+	0	ID=GCA000160335_00772;Name=PG:teichoic acid D-alanyltransferase DltB;locus_tag=GCA000160335_00772;product=PG:teichoic acid D-alanyltransferase DltB;Dbxref=GO:0016746,GO:0070395;gene=dltB;Parent=GCA000160335_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000613541,COG:COG1696,COG:M,KEGG:K03739,RefSeq:WP_000613541.1,SO:0001217,UniParc:UPI000005471F,UniRef:UniRef100_Q2FZW5,UniRef:UniRef50_B9EAK7,UniRef:UniRef90_A0A7U7JTN1
contig_1	Pyrodigal	gene	816684	816920	.	+	.	ID=GCA000160335_00773_gene;locus_tag=GCA000160335_00773;gene=dltC
contig_1	Pyrodigal	CDS	816684	816920	.	+	0	ID=GCA000160335_00773;Name=D-alanine--poly(phosphoribitol) ligase subunit 2;locus_tag=GCA000160335_00773;product=D-alanine--poly(phosphoribitol) ligase subunit 2;Dbxref=GO:0005737,GO:0019350,GO:0036370,GO:0070395,GO:0071555;gene=dltC;Parent=GCA000160335_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000395692.1,SO:0001217,UniParc:UPI000005471E,UniRef:UniRef100_Q2FZW4,UniRef:UniRef50_P39579,UniRef:UniRef90_Q2FZW4;ec_number=6.1.1.13
contig_1	Pyrodigal	gene	816917	818092	.	+	.	ID=GCA000160335_00774_gene;locus_tag=GCA000160335_00774;gene=dltD
contig_1	Pyrodigal	CDS	816917	818092	.	+	0	ID=GCA000160335_00774;Name=D-alanyl-lipoteichoic acid biosynthesis protein DltD;locus_tag=GCA000160335_00774;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;Dbxref=GO:0005886,GO:0070394,GO:0070395;gene=dltD;Parent=GCA000160335_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3966,COG:M,KEGG:K03740,RefSeq:WP_000769416.1,SO:0001217,UniParc:UPI000005471C,UniRef:UniRef100_Q2FZW3,UniRef:UniRef50_Q2FZW3,UniRef:UniRef90_Q2FZW3
contig_1	Pyrodigal	gene	818355	818597	.	-	.	ID=GCA000160335_00775_gene;locus_tag=GCA000160335_00775;gene=nifU
contig_1	Pyrodigal	CDS	818355	818597	.	-	0	ID=GCA000160335_00775;Name=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;locus_tag=GCA000160335_00775;product=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;gene=nifU;Parent=GCA000160335_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0694,COG:O,RefSeq:WP_001141883.1,SO:0001217,UniParc:UPI000005471B,UniRef:UniRef100_Q2FZW2,UniRef:UniRef50_I0JQ31,UniRef:UniRef90_Q2FZW2
contig_1	Pyrodigal	gene	818698	819021	.	+	.	ID=GCA000160335_00776_gene;locus_tag=GCA000160335_00776;gene=yuzD
contig_1	Pyrodigal	CDS	818698	819021	.	+	0	ID=GCA000160335_00776;Name=Disulfide oxidoreductase;locus_tag=GCA000160335_00776;product=Disulfide oxidoreductase;gene=yuzD;Parent=GCA000160335_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4837,COG:O,RefSeq:WP_000401409.1,SO:0001217,UniParc:UPI00003B152D,UniRef:UniRef100_A0A0E1X778,UniRef:UniRef50_A0A0H3JTK4,UniRef:UniRef90_A0A0H3JTK4
contig_1	Pyrodigal	gene	819081	820145	.	-	.	ID=GCA000160335_00777_gene;locus_tag=GCA000160335_00777;gene=ndh
contig_1	Pyrodigal	CDS	819081	820145	.	-	0	ID=GCA000160335_00777;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000160335_00777;product=Type II NADH:quinone oxidoreductase;gene=ndh;Parent=GCA000160335_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000794020.1,SO:0001217,UniParc:UPI0000054719,UniRef:UniRef100_Q2FZW0,UniRef:UniRef50_A0A239ZU84,UniRef:UniRef90_A0A077UJH8
contig_1	Pyrodigal	gene	820462	820698	.	+	.	ID=GCA000160335_00778_gene;locus_tag=GCA000160335_00778;gene=yuzB
contig_1	Pyrodigal	CDS	820462	820698	.	+	0	ID=GCA000160335_00778;Name=UPF0349 protein SACOL0942;locus_tag=GCA000160335_00778;product=UPF0349 protein SACOL0942;gene=yuzB;Parent=GCA000160335_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4844,COG:S,RefSeq:WP_001068337.1,SO:0001217,UniParc:UPI0000054718,UniRef:UniRef100_Q2FZV9,UniRef:UniRef50_A4ISE9,UniRef:UniRef90_Q2FZV9
contig_1	Pyrodigal	gene	820711	821070	.	+	.	ID=GCA000160335_00779_gene;locus_tag=GCA000160335_00779;gene=iscA
contig_1	Pyrodigal	CDS	820711	821070	.	+	0	ID=GCA000160335_00779;Name=FeS cluster biogenesis domain-containing protein;locus_tag=GCA000160335_00779;product=FeS cluster biogenesis domain-containing protein;gene=iscA;Parent=GCA000160335_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_001143497.1,SO:0001217,UniParc:UPI0000054717,UniRef:UniRef100_Q2FZV8,UniRef:UniRef50_A0A810E529,UniRef:UniRef90_G5JHW3
contig_1	Pyrodigal	gene	821524	822732	.	+	.	ID=GCA000160335_00780_gene;locus_tag=GCA000160335_00780;gene=ndh
contig_1	Pyrodigal	CDS	821524	822732	.	+	0	ID=GCA000160335_00780;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000160335_00780;product=Type II NADH:quinone oxidoreductase;Dbxref=GO:0003955,GO:0005886,GO:0019646,GO:0050136;gene=ndh;Parent=GCA000160335_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000046076.1,SO:0001217,UniParc:UPI0000054716,UniRef:UniRef100_Q2FZV7,UniRef:UniRef50_Q2FZV7,UniRef:UniRef90_Q2FZV7;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	822863	824338	.	+	.	ID=GCA000160335_00781_gene;locus_tag=GCA000160335_00781;gene=pepB
contig_1	Pyrodigal	CDS	822863	824338	.	+	0	ID=GCA000160335_00781;Name=Leucyl aminopeptidase family protein;locus_tag=GCA000160335_00781;product=Leucyl aminopeptidase family protein;gene=pepB;Parent=GCA000160335_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_001009683.1,SO:0001217,UniParc:UPI00003B152E,UniRef:UniRef100_A0A7Z7QXI9,UniRef:UniRef50_B9DIX2,UniRef:UniRef90_A0A0U1MHC9
contig_1	Pyrodigal	gene	824749	826065	.	+	.	ID=GCA000160335_00782_gene;locus_tag=GCA000160335_00782;gene=yuiF
contig_1	Pyrodigal	CDS	824749	826065	.	+	0	ID=GCA000160335_00782;Name=Na+/H+ antiporter family protein;locus_tag=GCA000160335_00782;product=Na+/H+ antiporter family protein;gene=yuiF;Parent=GCA000160335_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2056,COG:E,KEGG:K07084,RefSeq:WP_000606324.1,SO:0001217,UniParc:UPI00000D771F,UniRef:UniRef100_Q2FZV5,UniRef:UniRef50_Q2FZV5,UniRef:UniRef90_Q2FZV5
contig_1	Pyrodigal	gene	826084	826458	.	+	.	ID=GCA000160335_00783_gene;locus_tag=GCA000160335_00783;gene=paaI
contig_1	Pyrodigal	CDS	826084	826458	.	+	0	ID=GCA000160335_00783;Name=ComA operon protein 2;locus_tag=GCA000160335_00783;product=ComA operon protein 2;gene=paaI;Parent=GCA000160335_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000149292.1,SO:0001217,UniParc:UPI00003B152F,UniRef:UniRef100_A0A7Z7QXW4,UniRef:UniRef50_A0A090LQF4,UniRef:UniRef90_A0A090LQF4
contig_1	Pyrodigal	gene	826514	827668	.	-	.	ID=GCA000160335_00784_gene;locus_tag=GCA000160335_00784;gene=ndh
contig_1	Pyrodigal	CDS	826514	827668	.	-	0	ID=GCA000160335_00784;Name=FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000160335_00784;product=FAD/NAD(P)-binding domain-containing protein;gene=ndh;Parent=GCA000160335_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000558764.1,SO:0001217,UniParc:UPI00003B1530,UniRef:UniRef100_A0A7Z7QY43,UniRef:UniRef50_Q2G2I0,UniRef:UniRef90_Q2G2I0
contig_1	Pyrodigal	gene	827931	828287	.	-	.	ID=GCA000160335_00785_gene;locus_tag=GCA000160335_00785;gene=mnhG1
contig_1	Pyrodigal	CDS	827931	828287	.	-	0	ID=GCA000160335_00785;Name=Na+/H+ antiporter Mnh1 subunit G;locus_tag=GCA000160335_00785;product=Na+/H+ antiporter Mnh1 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG1;Parent=GCA000160335_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000590451,COG:COG1320,COG:P,RefSeq:WP_000590451.1,SO:0001217,UniParc:UPI00000D7713,UniRef:UniRef100_Q2G2H9,UniRef:UniRef50_Q2G2H9,UniRef:UniRef90_Q2G2H9
contig_1	Pyrodigal	gene	828265	828558	.	-	.	ID=GCA000160335_00786_gene;locus_tag=GCA000160335_00786;gene=mnhF1
contig_1	Pyrodigal	CDS	828265	828558	.	-	0	ID=GCA000160335_00786;Name=Na+/H+ antiporter Mnh1 subunit F;locus_tag=GCA000160335_00786;product=Na+/H+ antiporter Mnh1 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF1;Parent=GCA000160335_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001016306,COG:COG2212,COG:P,RefSeq:WP_001016306.1,SO:0001217,UniParc:UPI00000522D3,UniRef:UniRef100_Q2G2H6,UniRef:UniRef50_Q2G2H6,UniRef:UniRef90_Q2G2H6
contig_1	Pyrodigal	gene	828558	829037	.	-	.	ID=GCA000160335_00787_gene;locus_tag=GCA000160335_00787;gene=mnhE1
contig_1	Pyrodigal	CDS	828558	829037	.	-	0	ID=GCA000160335_00787;Name=Na+/H+ antiporter Mnh1 subunit E;locus_tag=GCA000160335_00787;product=Na+/H+ antiporter Mnh1 subunit E;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhE1;Parent=GCA000160335_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000290674,COG:COG1863,COG:P,RefSeq:WP_000290674.1,SO:0001217,UniParc:UPI0000054228,UniRef:UniRef100_Q2G2H8,UniRef:UniRef50_Q2G2H8,UniRef:UniRef90_Q2G2H8
contig_1	Pyrodigal	gene	829039	830535	.	-	.	ID=GCA000160335_00788_gene;locus_tag=GCA000160335_00788;gene=mnhD1
contig_1	Pyrodigal	CDS	829039	830535	.	-	0	ID=GCA000160335_00788;Name=Na+/H+ antiporter Mnh1 subunit D;locus_tag=GCA000160335_00788;product=Na+/H+ antiporter Mnh1 subunit D;Dbxref=GO:0005886,GO:0006814,GO:0008137,GO:0015297,GO:0015386,GO:0042773;gene=mnhD1;Parent=GCA000160335_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000573077,COG:COG0651,COG:CP,RefSeq:WP_000573086.1,SO:0001217,UniParc:UPI00005FE38D,UniRef:UniRef100_Q2YWT7,UniRef:UniRef50_Q2G2H7,UniRef:UniRef90_Q2G2H7
contig_1	Pyrodigal	gene	830528	830869	.	-	.	ID=GCA000160335_00789_gene;locus_tag=GCA000160335_00789;gene=mnhC1
contig_1	Pyrodigal	CDS	830528	830869	.	-	0	ID=GCA000160335_00789;Name=Na+/H+ antiporter Mnh1 subunit C;locus_tag=GCA000160335_00789;product=Na+/H+ antiporter Mnh1 subunit C;Dbxref=GO:0005886,GO:0006812,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhC1;Parent=GCA000160335_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000402803,COG:COG1006,COG:P,RefSeq:WP_000402803.1,SO:0001217,UniParc:UPI00000D765F,UniRef:UniRef100_Q2FZV3,UniRef:UniRef50_O05260,UniRef:UniRef90_Q2FZV3
contig_1	Pyrodigal	gene	830869	831297	.	-	.	ID=GCA000160335_00790_gene;locus_tag=GCA000160335_00790;gene=mnhB1
contig_1	Pyrodigal	CDS	830869	831297	.	-	0	ID=GCA000160335_00790;Name=Na+/H+ antiporter Mnh1 subunit B;locus_tag=GCA000160335_00790;product=Na+/H+ antiporter Mnh1 subunit B;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhB1;Parent=GCA000160335_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081626,COG:COG2111,COG:P,RefSeq:WP_001081626.1,SO:0001217,UniParc:UPI0000054246,UniRef:UniRef100_Q2FZV2,UniRef:UniRef50_Q2FZV2,UniRef:UniRef90_Q2FZV2
contig_1	Pyrodigal	gene	831290	833695	.	-	.	ID=GCA000160335_00791_gene;locus_tag=GCA000160335_00791;gene=mnhA1
contig_1	Pyrodigal	CDS	831290	833695	.	-	0	ID=GCA000160335_00791;Name=Na+/H+ antiporter Mnh1 subunit A;locus_tag=GCA000160335_00791;product=Na+/H+ antiporter Mnh1 subunit A;Dbxref=GO:0005886,GO:0006814,GO:0015297,GO:0051139,GO:0098662,GO:1902600;gene=mnhA1;Parent=GCA000160335_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_042727539,COG:COG2111,COG:P,RefSeq:WP_000054599.1,SO:0001217,UniParc:UPI00003B1532,UniRef:UniRef100_Q6GID6,UniRef:UniRef50_Q9K2S2,UniRef:UniRef90_Q9ZNG6
contig_1	Pyrodigal	gene	833826	834209	.	-	.	ID=GCA000160335_00792_gene;locus_tag=GCA000160335_00792
contig_1	Pyrodigal	CDS	833826	834209	.	-	0	ID=GCA000160335_00792;Name=Kinase associated B family protein;locus_tag=GCA000160335_00792;product=Kinase associated B family protein;Parent=GCA000160335_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000781162.1,SO:0001217,UniParc:UPI00000D767F,UniRef:UniRef100_A0A7Z7W299,UniRef:UniRef50_A0A0M2NU22,UniRef:UniRef90_A0A380DMN1
contig_1	Pyrodigal	gene	834273	834866	.	+	.	ID=GCA000160335_00793_gene;locus_tag=GCA000160335_00793;gene=ppiB
contig_1	Pyrodigal	CDS	834273	834866	.	+	0	ID=GCA000160335_00793;Name=Putative peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000160335_00793;product=Putative peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0140839,GO:0140840;gene=ppiB;Parent=GCA000160335_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_000035058.1,SO:0001217,UniParc:UPI000005425D,UniRef:UniRef100_Q2FZU9,UniRef:UniRef50_Q2FZU9,UniRef:UniRef90_Q2FZU9;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	835281	835658	.	+	.	ID=GCA000160335_00794_gene;locus_tag=GCA000160335_00794;gene=ygs
contig_1	Pyrodigal	CDS	835281	835658	.	+	0	ID=GCA000160335_00794;Name=S1 domain-containing post-transcriptional regulator Ygs;locus_tag=GCA000160335_00794;product=S1 domain-containing post-transcriptional regulator Ygs;gene=ygs;Parent=GCA000160335_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1098,COG:R,RefSeq:WP_001067294.1,SO:0001217,UniParc:UPI00000D9D39,UniRef:UniRef100_A0A7Z7QY58,UniRef:UniRef50_B9DIU9,UniRef:UniRef90_A0A1L8Y4M2
contig_1	Pyrodigal	gene	836020	837147	.	+	.	ID=GCA000160335_00795_gene;locus_tag=GCA000160335_00795;gene=fadH
contig_1	Pyrodigal	CDS	836020	837147	.	+	0	ID=GCA000160335_00795;Name=Putative NADH-dependent flavin oxidoreductase YqiG;locus_tag=GCA000160335_00795;product=Putative NADH-dependent flavin oxidoreductase YqiG;gene=fadH;Parent=GCA000160335_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000838046.1,SO:0001217,UniParc:UPI00019F4CDC,UniRef:UniRef100_A0A7Z7QXK0,UniRef:UniRef50_S2YL03,UniRef:UniRef90_A0A0U1MHF9
contig_1	Pyrodigal	gene	837455	838645	.	+	.	ID=GCA000160335_00796_gene;locus_tag=GCA000160335_00796;gene=rocD2
contig_1	Pyrodigal	CDS	837455	838645	.	+	0	ID=GCA000160335_00796;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000160335_00796;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0030170,GO:0042802,GO:0055129;gene=rocD2;Parent=GCA000160335_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,KEGG:K00819,RefSeq:WP_000167322.1,SO:0001217,UniParc:UPI0001B70135,UniRef:UniRef100_A0A7Z7QXP1,UniRef:UniRef50_P38021,UniRef:UniRef90_Q49W96;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	838754	839998	.	+	.	ID=GCA000160335_00797_gene;locus_tag=GCA000160335_00797;gene=gluD
contig_1	Pyrodigal	CDS	838754	839998	.	+	0	ID=GCA000160335_00797;Name=NAD-specific glutamate dehydrogenase;locus_tag=GCA000160335_00797;product=NAD-specific glutamate dehydrogenase;Dbxref=GO:0004352,GO:0006520,GO:0006538;gene=gluD;Parent=GCA000160335_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_000138487.1,SO:0001217,UniParc:UPI00000D78A5,UniRef:UniRef100_Q5HHC7,UniRef:UniRef50_P39633,UniRef:UniRef90_Q5HHC7;ec_number=1.4.1.2
contig_1	Pyrodigal	gene	840393	841322	.	-	.	ID=GCA000160335_00798_gene;locus_tag=GCA000160335_00798;gene=ugpQ
contig_1	Pyrodigal	CDS	840393	841322	.	-	0	ID=GCA000160335_00798;Name=GP-PDE domain-containing protein;locus_tag=GCA000160335_00798;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000160335_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,RefSeq:WP_000185311.1,SO:0001217,UniParc:UPI00003B1536,UniRef:UniRef100_A0A167H2Q7,UniRef:UniRef50_A0A380GA35,UniRef:UniRef90_Q2FZU3
contig_1	Pyrodigal	gene	841564	842943	.	-	.	ID=GCA000160335_00799_gene;locus_tag=GCA000160335_00799;gene=argH
contig_1	Pyrodigal	CDS	841564	842943	.	-	0	ID=GCA000160335_00799;Name=argininosuccinate lyase;locus_tag=GCA000160335_00799;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0042450;gene=argH;Parent=GCA000160335_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_000066056.1,SO:0001217,UniParc:UPI00003B1537,UniRef:UniRef100_Q6GIC8,UniRef:UniRef50_P73257,UniRef:UniRef90_Q2FZU2;ec_number=4.3.2.1
contig_1	Pyrodigal	gene	842933	844138	.	-	.	ID=GCA000160335_00800_gene;locus_tag=GCA000160335_00800;gene=argG
contig_1	Pyrodigal	CDS	842933	844138	.	-	0	ID=GCA000160335_00800;Name=argininosuccinate synthase;locus_tag=GCA000160335_00800;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526;gene=argG;Parent=GCA000160335_00800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_000660054.1,SO:0001217,UniParc:UPI00003B1538,UniRef:UniRef100_Q6GIC7,UniRef:UniRef50_A0RJM4,UniRef:UniRef90_Q2FZU1;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	844489	845820	.	+	.	ID=GCA000160335_00801_gene;locus_tag=GCA000160335_00801;gene=pgi
contig_1	Pyrodigal	CDS	844489	845820	.	+	0	ID=GCA000160335_00801;Name=glucose-6-phosphate isomerase;locus_tag=GCA000160335_00801;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000160335_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000148855.1,SO:0001217,UniParc:UPI000012AF6E,UniRef:UniRef100_Q2FIB3,UniRef:UniRef50_P13376,UniRef:UniRef90_Q2FIB3;ec_number=5.3.1.9
contig_1	Pyrodigal	gene	846146	846721	.	+	.	ID=GCA000160335_00802_gene;locus_tag=GCA000160335_00802;gene=tVP38
contig_1	Pyrodigal	CDS	846146	846721	.	+	0	ID=GCA000160335_00802;Name=Putative undecaprenyl phosphate transporter SAOUHSC_00901;locus_tag=GCA000160335_00802;product=Putative undecaprenyl phosphate transporter SAOUHSC_00901;Dbxref=GO:0005886;gene=tVP38;Parent=GCA000160335_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0398,COG:S,RefSeq:WP_000007960.1,SO:0001217,UniParc:UPI00003B1539,UniRef:UniRef100_A0A7Z7QY97,UniRef:UniRef50_Q2FZT9,UniRef:UniRef90_Q2FZT9
contig_1	Pyrodigal	gene	846726	847250	.	+	.	ID=GCA000160335_00803_gene;locus_tag=GCA000160335_00803;gene=lepB
contig_1	Pyrodigal	CDS	846726	847250	.	+	0	ID=GCA000160335_00803;Name=signal peptidase I;locus_tag=GCA000160335_00803;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000160335_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000758209.1,SO:0001217,UniParc:UPI000012E499,UniRef:UniRef100_P0A063,UniRef:UniRef50_P0A063,UniRef:UniRef90_P0A063;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	847266	847841	.	+	.	ID=GCA000160335_00804_gene;locus_tag=GCA000160335_00804;gene=lepB
contig_1	Pyrodigal	CDS	847266	847841	.	+	0	ID=GCA000160335_00804;Name=signal peptidase I;locus_tag=GCA000160335_00804;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000160335_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000711897.1,SO:0001217,UniParc:UPI00003B153B,UniRef:UniRef100_Q6GIC3,UniRef:UniRef50_Q5HHB9,UniRef:UniRef90_Q5HHB9;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	848001	851477	.	+	.	ID=GCA000160335_00805_gene;locus_tag=GCA000160335_00805;gene=addB
contig_1	Pyrodigal	CDS	848001	851477	.	+	0	ID=GCA000160335_00805;Name=helicase-exonuclease AddAB subunit AddB;locus_tag=GCA000160335_00805;product=helicase-exonuclease AddAB subunit AddB;Dbxref=GO:0000724,GO:0003690,GO:0004527,GO:0005524,GO:0008409,GO:0009378,GO:0036121,GO:0046872,GO:0051539,GO:0061749,GO:1990518;gene=addB;Parent=GCA000160335_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3857,COG:L,RefSeq:WP_000172367.1,SO:0001217,UniParc:UPI00003B153C,UniRef:UniRef100_Q6GIC2,UniRef:UniRef50_Q2FZT6,UniRef:UniRef90_Q2FZT6;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	851478	855131	.	+	.	ID=GCA000160335_00806_gene;locus_tag=GCA000160335_00806;gene=addA
contig_1	Pyrodigal	CDS	851478	855131	.	+	0	ID=GCA000160335_00806;Name=helicase-exonuclease AddAB subunit AddA;locus_tag=GCA000160335_00806;product=helicase-exonuclease AddAB subunit AddA;Dbxref=GO:0000724,GO:0003678,GO:0003689,GO:0003690,GO:0005524,GO:0005829,GO:0006302,GO:0008408,GO:0009378,GO:0016818,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=addA;Parent=GCA000160335_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K16898,RefSeq:WP_000154951.1,SO:0001217,UniParc:UPI0001B70151,UniRef:UniRef100_UPI0001B70151,UniRef:UniRef50_Q4L4Y3,UniRef:UniRef90_Q2FZT5;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	855297	856199	.	+	.	ID=GCA000160335_00807_gene;locus_tag=GCA000160335_00807;gene=ycgM
contig_1	Pyrodigal	CDS	855297	856199	.	+	0	ID=GCA000160335_00807;Name=putative protein SAS0838;locus_tag=GCA000160335_00807;product=putative protein SAS0838;Dbxref=GO:0018773,GO:0046872;gene=ycgM;Parent=GCA000160335_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0179,COG:Q,RefSeq:WP_000670755.1,SO:0001217,UniParc:UPI00019F4CD9,UniRef:UniRef100_A0A7Z7W2A4,UniRef:UniRef50_Q2FZT4,UniRef:UniRef90_Q2FZT4
contig_1	Pyrodigal	gene	856525	856914	.	+	.	ID=GCA000160335_00808_gene;locus_tag=GCA000160335_00808
contig_1	Pyrodigal	CDS	856525	856914	.	+	0	ID=GCA000160335_00808;Name=UPF0344 protein MW0851;locus_tag=GCA000160335_00808;product=UPF0344 protein MW0851;Dbxref=GO:0005886;Parent=GCA000160335_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902803.1,SO:0001217,UniParc:UPI0001B70152,UniRef:UniRef100_UPI0001B70152,UniRef:UniRef50_Q2FZT3,UniRef:UniRef90_Q2FZT3
contig_1	Infernal	gene	857076	857301	.	-	.	ID=GCA000160335_00809_gene;locus_tag=GCA000160335_00809;gene=tsr24
contig_1	Infernal	ncRNA	857076	857301	1.1e-28	-	.	ID=GCA000160335_00809;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_00809;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_00809_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	857291	858937	.	+	.	ID=GCA000160335_00810_gene;locus_tag=GCA000160335_00810;gene=tnp
contig_1	Pyrodigal	CDS	857291	858937	.	+	0	ID=GCA000160335_00810;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_00810;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277726.1,SO:0001217,UniParc:UPI0001D854CF,UniRef:UniRef100_A0A7Z7QY64,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	859009	860325	.	-	.	ID=GCA000160335_00811_gene;locus_tag=GCA000160335_00811;gene=cdr
contig_1	Pyrodigal	CDS	859009	860325	.	-	0	ID=GCA000160335_00811;Name=CoA-disulfide reductase;locus_tag=GCA000160335_00811;product=CoA-disulfide reductase;Dbxref=GO:0003756,GO:0016491,GO:0045454,GO:0050451,GO:0050660,GO:0050661;gene=cdr;Parent=GCA000160335_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,KEGG:K08255,RefSeq:WP_001124494.1,SO:0001217,UniParc:UPI00003B1541,UniRef:UniRef100_Q6GIB7,UniRef:UniRef50_O52582,UniRef:UniRef90_O52582;ec_number=1.8.1.14
contig_1	Pyrodigal	gene	860377	861201	.	-	.	ID=GCA000160335_00812_gene;locus_tag=GCA000160335_00812;gene=cof
contig_1	Pyrodigal	CDS	860377	861201	.	-	0	ID=GCA000160335_00812;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000160335_00812;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000160335_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_001182437.1,SO:0001217,UniParc:UPI00003B1542,UniRef:UniRef100_A0A7Z7QXQ2,UniRef:UniRef50_P70947,UniRef:UniRef90_Q2FZT1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	861315	861623	.	+	.	ID=GCA000160335_00813_gene;locus_tag=GCA000160335_00813;gene=sufT
contig_1	Pyrodigal	CDS	861315	861623	.	+	0	ID=GCA000160335_00813;Name=Fe-S protein maturation auxiliary factor SufT;locus_tag=GCA000160335_00813;product=Fe-S protein maturation auxiliary factor SufT;gene=sufT;Parent=GCA000160335_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2151,COG:O,RefSeq:WP_000390575.1,SO:0001217,UniParc:UPI00000D76BA,UniRef:UniRef100_A0A0H2XI17,UniRef:UniRef50_A0A0H2XI17,UniRef:UniRef90_A0A0H2XI17
contig_1	Pyrodigal	gene	862203	863726	.	+	.	ID=GCA000160335_00814_gene;locus_tag=GCA000160335_00814;gene=oafA
contig_1	Pyrodigal	CDS	862203	863726	.	+	0	ID=GCA000160335_00814;Name=Putative O-acetyltransferase MW0856;locus_tag=GCA000160335_00814;product=Putative O-acetyltransferase MW0856;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oafA;Parent=GCA000160335_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,SO:0001217,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q99VB6;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	864219	866828	.	+	.	ID=GCA000160335_00815_gene;locus_tag=GCA000160335_00815;gene=clpB
contig_1	Pyrodigal	CDS	864219	866828	.	+	0	ID=GCA000160335_00815;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000160335_00815;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026;gene=clpB;Parent=GCA000160335_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000353961.1,SO:0001217,UniParc:UPI0001B702CB,UniRef:UniRef100_UPI0001B702CB,UniRef:UniRef50_Q8CPT5,UniRef:UniRef90_Q99VB5
contig_1	Pyrodigal	gene	866887	867756	.	-	.	ID=GCA000160335_00816_gene;locus_tag=GCA000160335_00816;gene=lysR
contig_1	Pyrodigal	CDS	866887	867756	.	-	0	ID=GCA000160335_00816;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000160335_00816;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000160335_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001047061.1,SO:0001217,UniParc:UPI00003B1546,UniRef:UniRef100_A0A7Z7QYK8,UniRef:UniRef50_Q2FZS7,UniRef:UniRef90_Q2FZS7
contig_1	Pyrodigal	gene	867866	869011	.	+	.	ID=GCA000160335_00817_gene;locus_tag=GCA000160335_00817;gene=leuA
contig_1	Pyrodigal	CDS	867866	869011	.	+	0	ID=GCA000160335_00817;Name=2-isopropylmalate synthase;locus_tag=GCA000160335_00817;product=2-isopropylmalate synthase;gene=leuA;Parent=GCA000160335_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,RefSeq:WP_000619360.1,SO:0001217,UniParc:UPI00000D780D,UniRef:UniRef100_A0A4T9Z9Z3,UniRef:UniRef50_A0A4T9Z9Z3,UniRef:UniRef90_A0A4T9Z9Z3
contig_1	Pyrodigal	gene	868995	869636	.	+	.	ID=GCA000160335_00818_gene;locus_tag=GCA000160335_00818;gene=tsaC
contig_1	Pyrodigal	CDS	868995	869636	.	+	0	ID=GCA000160335_00818;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000160335_00818;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000160335_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_000404423.1,SO:0001217,UniParc:UPI00003B1547,UniRef:UniRef100_A0A7Z7W199,UniRef:UniRef50_A0A7Z7W199,UniRef:UniRef90_A0A7Z7W199;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	869629	870747	.	+	.	ID=GCA000160335_00819_gene;locus_tag=GCA000160335_00819
contig_1	Pyrodigal	CDS	869629	870747	.	+	0	ID=GCA000160335_00819;Name=MFS transporter;locus_tag=GCA000160335_00819;product=MFS transporter;Parent=GCA000160335_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037449.1,SO:0001217,UniParc:UPI00019F4CD6,UniRef:UniRef100_A0A2W3L7N7,UniRef:UniRef50_Q2FZS4,UniRef:UniRef90_Q2FZS4
contig_1	Pyrodigal	gene	870731	871246	.	+	.	ID=GCA000160335_00820_gene;locus_tag=GCA000160335_00820;gene=ybhB
contig_1	Pyrodigal	CDS	870731	871246	.	+	0	ID=GCA000160335_00820;Name=YbhB/YbcL family Raf kinase inhibitor-like protein;locus_tag=GCA000160335_00820;product=YbhB/YbcL family Raf kinase inhibitor-like protein;gene=ybhB;Parent=GCA000160335_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1881,COG:R,RefSeq:WP_000769795.1,SO:0001217,UniParc:UPI00003B1549,UniRef:UniRef100_A0A7Z7W137,UniRef:UniRef50_Q2FZS3,UniRef:UniRef90_Q2FZS3
contig_1	Pyrodigal	gene	871557	871991	.	+	.	ID=GCA000160335_00821_gene;locus_tag=GCA000160335_00821
contig_1	Pyrodigal	CDS	871557	871991	.	+	0	ID=GCA000160335_00821;Name=Cell surface like-protein Map-w;locus_tag=GCA000160335_00821;product=Cell surface like-protein Map-w;Parent=GCA000160335_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14204,RefSeq:WP_000769690.1,SO:0001217,UniParc:UPI00003B154A,UniRef:UniRef100_A0A7Z7W2A8,UniRef:UniRef50_A0A224B134,UniRef:UniRef90_A0AAE8P9X9
contig_1	Pyrodigal	gene	872248	872433	.	-	.	ID=GCA000160335_00822_gene;locus_tag=GCA000160335_00822
contig_1	Pyrodigal	CDS	872248	872433	.	-	0	ID=GCA000160335_00822;Name=DUF2929 domain-containing protein;locus_tag=GCA000160335_00822;product=DUF2929 domain-containing protein;Parent=GCA000160335_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000682089.1,SO:0001217,UniParc:UPI0000054B18,UniRef:UniRef100_Q2FZS1,UniRef:UniRef50_Q2FZS1,UniRef:UniRef90_Q2FZS1
contig_1	Pyrodigal	gene	872728	873669	.	+	.	ID=GCA000160335_00823_gene;locus_tag=GCA000160335_00823;gene=fabH
contig_1	Pyrodigal	CDS	872728	873669	.	+	0	ID=GCA000160335_00823;Name=Beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA000160335_00823;product=Beta-ketoacyl-[acyl-carrier-protein] synthase III;Dbxref=GO:0004315,GO:0005737,GO:0006633,GO:0033818;gene=fabH;Parent=GCA000160335_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0332,COG:I,RefSeq:WP_001100527.1,SO:0001217,UniParc:UPI0001B70154,UniRef:UniRef100_UPI0001B70154,UniRef:UniRef50_P68795,UniRef:UniRef90_P68795;ec_number=2.3.1.180
contig_1	Pyrodigal	gene	873681	874925	.	+	.	ID=GCA000160335_00824_gene;locus_tag=GCA000160335_00824;gene=fabF
contig_1	Pyrodigal	CDS	873681	874925	.	+	0	ID=GCA000160335_00824;Name=beta-ketoacyl-ACP synthase II;locus_tag=GCA000160335_00824;product=beta-ketoacyl-ACP synthase II;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabF;Parent=GCA000160335_00824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_000081181.1,SO:0001217,UniParc:UPI00003B154B,UniRef:UniRef100_Q6GIA3,UniRef:UniRef50_O34340,UniRef:UniRef90_Q5HHA1;ec_number=2.3.1.179
contig_1	Pyrodigal	gene	874980	875351	.	-	.	ID=GCA000160335_00825_gene;locus_tag=GCA000160335_00825
contig_1	Pyrodigal	CDS	874980	875351	.	-	0	ID=GCA000160335_00825;Name=DUF3899 domain-containing protein;locus_tag=GCA000160335_00825;product=DUF3899 domain-containing protein;Parent=GCA000160335_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000915161.1,SO:0001217,UniParc:UPI00003B154C,UniRef:UniRef100_A0A7Z7QXR3,UniRef:UniRef50_Q2FZR8,UniRef:UniRef90_A0A0U1MHH0
contig_1	Pyrodigal	gene	875594	876520	.	+	.	ID=GCA000160335_00826_gene;locus_tag=GCA000160335_00826;gene=opp3b
contig_1	Pyrodigal	CDS	875594	876520	.	+	0	ID=GCA000160335_00826;Name=oligopeptide ABC transporter permease;locus_tag=GCA000160335_00826;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3b;Parent=GCA000160335_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000521533.1,SO:0001217,UniParc:UPI0000054B14,UniRef:UniRef100_Q2FZR7,UniRef:UniRef50_Q2FZR7,UniRef:UniRef90_Q2FZR7
contig_1	Pyrodigal	gene	876520	877590	.	+	.	ID=GCA000160335_00827_gene;locus_tag=GCA000160335_00827;gene=opp3C
contig_1	Pyrodigal	CDS	876520	877590	.	+	0	ID=GCA000160335_00827;Name=oligopeptide ABC transporter permease;locus_tag=GCA000160335_00827;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3C;Parent=GCA000160335_00827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000829637.1,SO:0001217,UniParc:UPI00003B154D,UniRef:UniRef100_A0A7Z7QXZ1,UniRef:UniRef50_B9DIT6,UniRef:UniRef90_Q2FZR6
contig_1	Pyrodigal	gene	877606	878688	.	+	.	ID=GCA000160335_00828_gene;locus_tag=GCA000160335_00828;gene=dppD
contig_1	Pyrodigal	CDS	877606	878688	.	+	0	ID=GCA000160335_00828;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_00828;product=ABC transporter domain-containing protein;gene=dppD;Parent=GCA000160335_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000140043.1,SO:0001217,UniParc:UPI00003B154E,UniRef:UniRef100_A0A7Z7QY75,UniRef:UniRef50_A0A1E9VQX6,UniRef:UniRef90_Q2FZR5
contig_1	Pyrodigal	gene	878678	879619	.	+	.	ID=GCA000160335_00829_gene;locus_tag=GCA000160335_00829;gene=oppF
contig_1	Pyrodigal	CDS	878678	879619	.	+	0	ID=GCA000160335_00829;Name=Oligopeptide transport ATP-binding protein oppF;locus_tag=GCA000160335_00829;product=Oligopeptide transport ATP-binding protein oppF;gene=oppF;Parent=GCA000160335_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000786746.1,SO:0001217,UniParc:UPI00003B154F,UniRef:UniRef100_A0A7Z7QXM2,UniRef:UniRef50_A0A091C226,UniRef:UniRef90_A0A2X2MUC1
contig_1	Pyrodigal	gene	879638	881293	.	+	.	ID=GCA000160335_00830_gene;locus_tag=GCA000160335_00830;gene=oppA
contig_1	Pyrodigal	CDS	879638	881293	.	+	0	ID=GCA000160335_00830;Name=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;locus_tag=GCA000160335_00830;product=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;gene=oppA;Parent=GCA000160335_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_000197096.1,SO:0001217,UniParc:UPI00003B1550,UniRef:UniRef100_A0A166IYH7,UniRef:UniRef50_S2XM61,UniRef:UniRef90_A0A166IYH7
contig_1	Pyrodigal	gene	881505	881771	.	+	.	ID=GCA000160335_00831_gene;locus_tag=GCA000160335_00831
contig_1	Pyrodigal	CDS	881505	881771	.	+	0	ID=GCA000160335_00831;Name=Peptide/nickel transport system substrate-binding protein;locus_tag=GCA000160335_00831;product=Peptide/nickel transport system substrate-binding protein;Parent=GCA000160335_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D854C8,UniRef:UniRef100_A0A7Z7W160,UniRef:UniRef50_A0A7Z7W160,UniRef:UniRef90_A0A7Z7W160
contig_1	Pyrodigal	gene	881763	882710	.	-	.	ID=GCA000160335_00832_gene;locus_tag=GCA000160335_00832;gene=tnp
contig_1	Pyrodigal	CDS	881763	882710	.	-	0	ID=GCA000160335_00832;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_00832;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121211.1,SO:0001217,UniParc:UPI00001833E5,UniRef:UniRef100_Q9MBM9,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	882939	884294	.	+	.	ID=GCA000160335_00833_gene;locus_tag=GCA000160335_00833
contig_1	Pyrodigal	CDS	882939	884294	.	+	0	ID=GCA000160335_00833;Name=Extracellular solute-binding protein%2C family 5;locus_tag=GCA000160335_00833;product=Extracellular solute-binding protein%2C family 5;Parent=GCA000160335_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD559,UniRef:UniRef100_A0A7Z7W1G7,UniRef:UniRef50_A0A7Z7W1G7,UniRef:UniRef90_A0A7Z7W1G7
contig_1	Pyrodigal	gene	884345	885331	.	+	.	ID=GCA000160335_00834_gene;locus_tag=GCA000160335_00834
contig_1	Pyrodigal	CDS	884345	885331	.	+	0	ID=GCA000160335_00834;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00834;product=ABC transporter ATP-binding protein;Parent=GCA000160335_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001067041.1,SO:0001217,UniParc:UPI00003B1551,UniRef:UniRef100_A0A163UK23,UniRef:UniRef50_A0A163UK23,UniRef:UniRef90_A0A163UK23
contig_1	Pyrodigal	gene	885334	886314	.	+	.	ID=GCA000160335_00835_gene;locus_tag=GCA000160335_00835;gene=dppD
contig_1	Pyrodigal	CDS	885334	886314	.	+	0	ID=GCA000160335_00835;Name=Dipeptide ABC transporter ATP-binding protein;locus_tag=GCA000160335_00835;product=Dipeptide ABC transporter ATP-binding protein;gene=dppD;Parent=GCA000160335_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000427776.1,SO:0001217,UniParc:UPI00003B1552,UniRef:UniRef100_A0A7Z7W2B4,UniRef:UniRef50_A0A150KNE3,UniRef:UniRef90_A0A389Q283
contig_1	Pyrodigal	gene	886307	887269	.	+	.	ID=GCA000160335_00836_gene;locus_tag=GCA000160335_00836;gene=opp4B
contig_1	Pyrodigal	CDS	886307	887269	.	+	0	ID=GCA000160335_00836;Name=oligopeptide ABC transporter permease;locus_tag=GCA000160335_00836;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp4B;Parent=GCA000160335_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000593417.1,SO:0001217,UniParc:UPI0000054B0B,UniRef:UniRef100_Q2FZQ9,UniRef:UniRef50_S2XU22,UniRef:UniRef90_A0A0U1MIX6
contig_1	Pyrodigal	gene	887281	888162	.	+	.	ID=GCA000160335_00837_gene;locus_tag=GCA000160335_00837;gene=opp4C
contig_1	Pyrodigal	CDS	887281	888162	.	+	0	ID=GCA000160335_00837;Name=oligopeptide ABC transporter permease;locus_tag=GCA000160335_00837;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp4C;Parent=GCA000160335_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_001180271.1,SO:0001217,UniParc:UPI00003B1553,UniRef:UniRef100_A0A8G2HYR2,UniRef:UniRef50_A0A075RFR8,UniRef:UniRef90_A0A8G2HYR2
contig_1	Pyrodigal	gene	888251	889039	.	-	.	ID=GCA000160335_00838_gene;locus_tag=GCA000160335_00838;gene=tnp
contig_1	Pyrodigal	CDS	888251	889039	.	-	0	ID=GCA000160335_00838;Name=IS3 family transposase ORF B;locus_tag=GCA000160335_00838;product=IS3 family transposase ORF B;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B142B,UniRef:UniRef100_A0A162FEK7,UniRef:UniRef50_Q49YK3,UniRef:UniRef90_A0A162FEK7
contig_1	Pyrodigal	gene	889063	889791	.	-	.	ID=GCA000160335_00839_gene;locus_tag=GCA000160335_00839;gene=tnp
contig_1	Pyrodigal	CDS	889063	889791	.	-	0	ID=GCA000160335_00839;Name=IS3 family ISSau2 transposase ORF A;locus_tag=GCA000160335_00839;product=IS3 family ISSau2 transposase ORF A;gene=tnp;Parent=GCA000160335_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau2,RefSeq:WP_000023693.1,SO:0001217,UniParc:UPI0001C0B7AB,UniRef:UniRef100_A0A0E1X7K9,UniRef:UniRef50_E0D531,UniRef:UniRef90_A0A0E1X7K9
contig_1	Infernal	gene	889899	890124	.	-	.	ID=GCA000160335_00840_gene;locus_tag=GCA000160335_00840;gene=tsr24
contig_1	Infernal	ncRNA	889899	890124	1.1e-28	-	.	ID=GCA000160335_00840;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_00840;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_00840_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	890114	891760	.	+	.	ID=GCA000160335_00841_gene;locus_tag=GCA000160335_00841;gene=tnp
contig_1	Pyrodigal	CDS	890114	891760	.	+	0	ID=GCA000160335_00841;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_00841;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_020967619.1,SO:0001217,UniParc:UPI00038DC522,UniRef:UniRef100_UPI00038DC522,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	891787	892776	.	-	.	ID=GCA000160335_00842_gene;locus_tag=GCA000160335_00842;gene=trpS
contig_1	Pyrodigal	CDS	891787	892776	.	-	0	ID=GCA000160335_00842;Name=tryptophan--tRNA ligase;locus_tag=GCA000160335_00842;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0006436;gene=trpS;Parent=GCA000160335_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0180,COG:J,RefSeq:WP_000448933.1,SO:0001217,UniParc:UPI00003B1556,UniRef:UniRef100_Q6GI89,UniRef:UniRef50_P21656,UniRef:UniRef90_Q5HH88;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	893071	893466	.	+	.	ID=GCA000160335_00843_gene;locus_tag=GCA000160335_00843;gene=spxA
contig_1	Pyrodigal	CDS	893071	893466	.	+	0	ID=GCA000160335_00843;Name=transcriptional regulator SpxA;locus_tag=GCA000160335_00843;product=transcriptional regulator SpxA;Dbxref=GO:0005737,GO:0045892;gene=spxA;Parent=GCA000160335_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,KEGG:K16509,RefSeq:WP_000258003.1,SO:0001217,UniParc:UPI00000D77A6,UniRef:UniRef100_Q2G1U6,UniRef:UniRef50_O31602,UniRef:UniRef90_Q2G1U6
contig_1	Pyrodigal	gene	893837	894556	.	+	.	ID=GCA000160335_00844_gene;locus_tag=GCA000160335_00844;gene=mecA
contig_1	Pyrodigal	CDS	893837	894556	.	+	0	ID=GCA000160335_00844;Name=adaptor protein MecA;locus_tag=GCA000160335_00844;product=adaptor protein MecA;Dbxref=GO:0030674;gene=mecA;Parent=GCA000160335_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4862,COG:KTN,RefSeq:WP_001217728.1,SO:0001217,UniParc:UPI00000D772B,UniRef:UniRef100_P60184,UniRef:UniRef50_P60184,UniRef:UniRef90_P60184
contig_1	Pyrodigal	gene	894677	895663	.	+	.	ID=GCA000160335_00845_gene;locus_tag=GCA000160335_00845;gene=coiA
contig_1	Pyrodigal	CDS	894677	895663	.	+	0	ID=GCA000160335_00845;Name=Competence protein CoiA;locus_tag=GCA000160335_00845;product=Competence protein CoiA;gene=coiA;Parent=GCA000160335_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4469,COG:R,RefSeq:WP_000959276.1,SO:0001217,UniParc:UPI00003B1557,UniRef:UniRef100_A0AAJ4YXL4,UniRef:UniRef50_Q2G1U4,UniRef:UniRef90_Q2G1U4
contig_1	Pyrodigal	gene	895711	897519	.	+	.	ID=GCA000160335_00846_gene;locus_tag=GCA000160335_00846;gene=pepF
contig_1	Pyrodigal	CDS	895711	897519	.	+	0	ID=GCA000160335_00846;Name=oligoendopeptidase F;locus_tag=GCA000160335_00846;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000160335_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000082722.1,SO:0001217,UniParc:UPI00003B1558,UniRef:UniRef100_A0A7Z7W1A6,UniRef:UniRef50_O31605,UniRef:UniRef90_A0A0D1I4D2;ec_number=3.4.24.-
contig_1	Infernal	gene	897619	897716	.	+	.	ID=GCA000160335_00847_gene;locus_tag=GCA000160335_00847;gene=rsaE
contig_1	Infernal	ncRNA	897619	897716	1.1e-15	+	.	ID=GCA000160335_00847;Name=RNA Staph. aureus E (RoxS);locus_tag=GCA000160335_00847;gene=rsaE;product=RNA Staph. aureus E (RoxS);Dbxref=RFAM:RF01820;Parent=GCA000160335_00847_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01820
contig_1	Infernal	gene	897682	897800	.	+	.	ID=GCA000160335_00848_gene;locus_tag=GCA000160335_00848;gene=rsaF
contig_1	Infernal	ncRNA	897682	897800	3.8e-23	+	.	ID=GCA000160335_00848;Name=RNA Staph. aureus F;locus_tag=GCA000160335_00848;gene=rsaF;product=RNA Staph. aureus F;Dbxref=RFAM:RF01858;Parent=GCA000160335_00848_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01858
contig_1	Pyrodigal	gene	897979	898785	.	-	.	ID=GCA000160335_00849_gene;locus_tag=GCA000160335_00849;gene=yjbH
contig_1	Pyrodigal	CDS	897979	898785	.	-	0	ID=GCA000160335_00849;Name=protease adaptor protein YjbH;locus_tag=GCA000160335_00849;product=protease adaptor protein YjbH;Dbxref=GO:0005737;gene=yjbH;Parent=GCA000160335_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000896697,BlastRules:WP_014614367,COG:COG2761,COG:O,RefSeq:WP_000896691.1,SO:0001217,UniParc:UPI00019CD584,UniRef:UniRef100_A0A7Z7W1H1,UniRef:UniRef50_Q2G203,UniRef:UniRef90_Q2G203
contig_1	Pyrodigal	gene	898808	899173	.	-	.	ID=GCA000160335_00850_gene;locus_tag=GCA000160335_00850;gene=yjbI
contig_1	Pyrodigal	CDS	898808	899173	.	-	0	ID=GCA000160335_00850;Name=truncated hemoglobin YjbI;locus_tag=GCA000160335_00850;product=truncated hemoglobin YjbI;gene=yjbI;Parent=GCA000160335_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000214067,BlastRules:WP_019167281,COG:COG2346,COG:P,RefSeq:WP_000214067.1,SO:0001217,UniParc:UPI00003B155A,UniRef:UniRef100_A0A7Z7W147,UniRef:UniRef50_Q2G202,UniRef:UniRef90_A0A2P7CBJ7
contig_1	Pyrodigal	gene	899277	899870	.	-	.	ID=GCA000160335_00851_gene;locus_tag=GCA000160335_00851;gene=yjbK
contig_1	Pyrodigal	CDS	899277	899870	.	-	0	ID=GCA000160335_00851;Name=CYTH domain-containing protein;locus_tag=GCA000160335_00851;product=CYTH domain-containing protein;gene=yjbK;Parent=GCA000160335_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4116,COG:R,RefSeq:WP_000224620.1,SO:0001217,UniParc:UPI00003B155B,UniRef:UniRef100_A0A7Z7W2C0,UniRef:UniRef50_Q2G201,UniRef:UniRef90_Q2G201
contig_1	Pyrodigal	gene	900056	900403	.	+	.	ID=GCA000160335_00852_gene;locus_tag=GCA000160335_00852
contig_1	Pyrodigal	CDS	900056	900403	.	+	0	ID=GCA000160335_00852;Name=UPF0738 protein SAS0874;locus_tag=GCA000160335_00852;product=UPF0738 protein SAS0874;Parent=GCA000160335_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001242102.1,SO:0001217,UniParc:UPI00000D9D4A,UniRef:UniRef100_Q2G200,UniRef:UniRef50_Q2G200,UniRef:UniRef90_Q2G200
contig_1	Pyrodigal	gene	900420	901055	.	+	.	ID=GCA000160335_00853_gene;locus_tag=GCA000160335_00853;gene=yjbM
contig_1	Pyrodigal	CDS	900420	901055	.	+	0	ID=GCA000160335_00853;Name=GTP pyrophosphokinase;locus_tag=GCA000160335_00853;product=GTP pyrophosphokinase;gene=yjbM;Parent=GCA000160335_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_001077683.1,SO:0001217,UniParc:UPI0000054B00,UniRef:UniRef100_Q2G204,UniRef:UniRef50_O31611,UniRef:UniRef90_A0A380G3W5
contig_1	Pyrodigal	gene	901072	901881	.	+	.	ID=GCA000160335_00854_gene;locus_tag=GCA000160335_00854;gene=nadK
contig_1	Pyrodigal	CDS	901072	901881	.	+	0	ID=GCA000160335_00854;Name=NAD kinase;locus_tag=GCA000160335_00854;product=NAD kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0019674,GO:0046872,GO:0051287;gene=nadK;Parent=GCA000160335_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_001270834.1,SO:0001217,UniParc:UPI0000054AFF,UniRef:UniRef100_Q2G1Z9,UniRef:UniRef50_Q8Y8D7,UniRef:UniRef90_Q2G1Z9;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	901878	902732	.	+	.	ID=GCA000160335_00855_gene;locus_tag=GCA000160335_00855;gene=rluA
contig_1	Pyrodigal	CDS	901878	902732	.	+	0	ID=GCA000160335_00855;Name=Ribosomal large subunit pseudouridine synthase D;locus_tag=GCA000160335_00855;product=Ribosomal large subunit pseudouridine synthase D;gene=rluA;Parent=GCA000160335_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669938.1,SO:0001217,UniParc:UPI00003B155C,UniRef:UniRef100_A0A7Z7QXU2,UniRef:UniRef50_A0A380CJ34,UniRef:UniRef90_A0A390AE29
contig_1	Pyrodigal	gene	902753	904138	.	+	.	ID=GCA000160335_00856_gene;locus_tag=GCA000160335_00856;gene=mgtE
contig_1	Pyrodigal	CDS	902753	904138	.	+	0	ID=GCA000160335_00856;Name=magnesium transporter;locus_tag=GCA000160335_00856;product=magnesium transporter;Dbxref=GO:0015095,GO:0015693,GO:0016020;gene=mgtE;Parent=GCA000160335_00856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2239,COG:P,RefSeq:WP_000062404.1,SO:0001217,UniParc:UPI00003B155D,UniRef:UniRef100_A0A7Z7QXU5,UniRef:UniRef50_A0A2T4SE99,UniRef:UniRef90_A0A0D1GXI3
contig_1	Pyrodigal	gene	904148	905992	.	+	.	ID=GCA000160335_00857_gene;locus_tag=GCA000160335_00857;gene=trkA
contig_1	Pyrodigal	CDS	904148	905992	.	+	0	ID=GCA000160335_00857;Name=Sodium:proton antiporter;locus_tag=GCA000160335_00857;product=Sodium:proton antiporter;gene=trkA;Parent=GCA000160335_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000395156.1,SO:0001217,UniParc:UPI00003B155E,UniRef:UniRef100_A0A7Z7QY09,UniRef:UniRef50_O31615,UniRef:UniRef90_Q2FZQ4
contig_1	Pyrodigal	gene	906270	907040	.	+	.	ID=GCA000160335_00858_gene;locus_tag=GCA000160335_00858;gene=fabI
contig_1	Pyrodigal	CDS	906270	907040	.	+	0	ID=GCA000160335_00858;Name=enoyl-ACP reductase FabI;locus_tag=GCA000160335_00858;product=enoyl-ACP reductase FabI;Dbxref=GO:0004318,GO:0006633,GO:0030497,GO:0042802,GO:0050661,GO:0141148;gene=fabI;Parent=GCA000160335_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_000933195.1,SO:0001217,UniParc:UPI00000D774F,UniRef:UniRef100_Q6GI75,UniRef:UniRef50_Q2FZQ3,UniRef:UniRef90_Q2FZQ3;ec_number=1.3.1.39
contig_1	Pyrodigal	gene	907235	908320	.	-	.	ID=GCA000160335_00859_gene;locus_tag=GCA000160335_00859;gene=perM
contig_1	Pyrodigal	CDS	907235	908320	.	-	0	ID=GCA000160335_00859;Name=AI-2E family transporter;locus_tag=GCA000160335_00859;product=AI-2E family transporter;gene=perM;Parent=GCA000160335_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000933110.1,SO:0001217,UniParc:UPI0001B7017A,UniRef:UniRef100_UPI0001B7017A,UniRef:UniRef50_Q2FZQ2,UniRef:UniRef90_Q2FZQ2
contig_1	Pyrodigal	gene	908662	910230	.	+	.	ID=GCA000160335_00860_gene;locus_tag=GCA000160335_00860;gene=alsT
contig_1	Pyrodigal	CDS	908662	910230	.	+	0	ID=GCA000160335_00860;Name=Alanine:cation symporter family protein;locus_tag=GCA000160335_00860;product=Alanine:cation symporter family protein;gene=alsT;Parent=GCA000160335_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000570704.1,SO:0001217,UniParc:UPI00003B155F,UniRef:UniRef100_A0A7Z7QYN9,UniRef:UniRef50_A0A6N3F963,UniRef:UniRef90_Q2FZQ1
contig_1	Pyrodigal	gene	910373	911131	.	+	.	ID=GCA000160335_00861_gene;locus_tag=GCA000160335_00861;gene=fes
contig_1	Pyrodigal	CDS	910373	911131	.	+	0	ID=GCA000160335_00861;Name=Esterase family protein;locus_tag=GCA000160335_00861;product=Esterase family protein;gene=fes;Parent=GCA000160335_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2382,COG:P,RefSeq:WP_000889176.1,SO:0001217,UniParc:UPI00003B1560,UniRef:UniRef100_A0A7Z7QYD5,UniRef:UniRef50_Q2FZQ0,UniRef:UniRef90_Q2FZQ0
contig_1	Pyrodigal	gene	911297	912022	.	+	.	ID=GCA000160335_00862_gene;locus_tag=GCA000160335_00862
contig_1	Pyrodigal	CDS	911297	912022	.	+	0	ID=GCA000160335_00862;Name=hypothetical protein;locus_tag=GCA000160335_00862;product=hypothetical protein;Parent=GCA000160335_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060544.1,SO:0001217,UniParc:UPI00019F4D89,UniRef:UniRef100_A0A7Z7W170,UniRef:UniRef50_A0A6B1RUL7,UniRef:UniRef90_A0A6B1RUL7
contig_1	Pyrodigal	gene	912024	912875	.	+	.	ID=GCA000160335_00863_gene;locus_tag=GCA000160335_00863
contig_1	Pyrodigal	CDS	912024	912875	.	+	0	ID=GCA000160335_00863;Name=DNA-3-methyladenine glycosidase;locus_tag=GCA000160335_00863;product=DNA-3-methyladenine glycosidase;Parent=GCA000160335_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000355329.1,SO:0001217,UniParc:UPI00019CD54A,UniRef:UniRef100_A0A2X2LWN3,UniRef:UniRef50_A0A2X2LWN3,UniRef:UniRef90_A0A2X2LWN3
contig_1	Pyrodigal	gene	913618	914127	.	+	.	ID=GCA000160335_00864_gene;locus_tag=GCA000160335_00864;gene=thpR
contig_1	Pyrodigal	CDS	913618	914127	.	+	0	ID=GCA000160335_00864;Name=Putative phosphoesterase SA0873;locus_tag=GCA000160335_00864;product=Putative phosphoesterase SA0873;Dbxref=GO:0016788;gene=thpR;Parent=GCA000160335_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1514,COG:J,RefSeq:WP_000600387.1,SO:0001217,UniParc:UPI00000D77FD,UniRef:UniRef100_Q99V77,UniRef:UniRef50_Q2FZP9,UniRef:UniRef90_Q2FZP9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	914240	915430	.	-	.	ID=GCA000160335_00865_gene;locus_tag=GCA000160335_00865;gene=ltaA
contig_1	Pyrodigal	CDS	914240	915430	.	-	0	ID=GCA000160335_00865;Name=lipoteichoic acid biosynthesis MFS flippase LtaA;locus_tag=GCA000160335_00865;product=lipoteichoic acid biosynthesis MFS flippase LtaA;Dbxref=GO:0005886,GO:0006869,GO:0015297,GO:0070395,GO:0140327;gene=ltaA;Parent=GCA000160335_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001154224.1,SO:0001217,UniParc:UPI00000D9D4E,UniRef:UniRef100_Q6GI68,UniRef:UniRef50_Q2FZP8,UniRef:UniRef90_Q2FZP8
contig_1	Pyrodigal	gene	915408	916583	.	-	.	ID=GCA000160335_00866_gene;locus_tag=GCA000160335_00866;gene=ugtP
contig_1	Pyrodigal	CDS	915408	916583	.	-	0	ID=GCA000160335_00866;Name=diglucosyl diacylglycerol synthase;locus_tag=GCA000160335_00866;product=diglucosyl diacylglycerol synthase;Dbxref=GO:0005886,GO:0009246,GO:0009247,GO:0047228,GO:0070395;gene=ugtP;Parent=GCA000160335_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,RefSeq:WP_000258649.1,SO:0001217,UniParc:UPI00019CD548,UniRef:UniRef100_A0A7Z7QXU6,UniRef:UniRef50_Q2FZP7,UniRef:UniRef90_Q2FZP7;ec_number=2.4.1.315
contig_1	Pyrodigal	gene	917015	918499	.	+	.	ID=GCA000160335_00867_gene;locus_tag=GCA000160335_00867;gene=murE
contig_1	Pyrodigal	CDS	917015	918499	.	+	0	ID=GCA000160335_00867;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;locus_tag=GCA000160335_00867;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0008360,GO:0009252,GO:0047482,GO:0051301,GO:0071555;gene=murE;Parent=GCA000160335_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_000340133.1,SO:0001217,UniParc:UPI00003B1564,UniRef:UniRef100_Q6GI66,UniRef:UniRef50_Q2FZP6,UniRef:UniRef90_Q2FZP6;ec_number=6.3.2.7
contig_1	Pyrodigal	gene	918489	918740	.	+	.	ID=GCA000160335_00868_gene;locus_tag=GCA000160335_00868
contig_1	Pyrodigal	CDS	918489	918740	.	+	0	ID=GCA000160335_00868;Name=YueH-like family protein;locus_tag=GCA000160335_00868;product=YueH-like family protein;Parent=GCA000160335_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000247593.1,SO:0001217,UniParc:UPI00003B1565,UniRef:UniRef100_A0A7Z7QXQ1,UniRef:UniRef50_Q2FZP5,UniRef:UniRef90_Q2FZP5
contig_1	Pyrodigal	gene	918740	920302	.	+	.	ID=GCA000160335_00869_gene;locus_tag=GCA000160335_00869;gene=prfC
contig_1	Pyrodigal	CDS	918740	920302	.	+	0	ID=GCA000160335_00869;Name=peptide chain release factor 3;locus_tag=GCA000160335_00869;product=peptide chain release factor 3;Dbxref=GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150;gene=prfC;Parent=GCA000160335_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_001049957.1,SO:0001217,UniParc:UPI000013378F,UniRef:UniRef100_Q6GI64,UniRef:UniRef50_Q8Y8C0,UniRef:UniRef90_Q2FZP4
contig_1	Infernal	regulatory_region	920422	920529	4.4e-10	+	.	ID=HBCHLJIIAO_169;Name=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);product=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);Dbxref=RFAM:RF00080;inference=profile:Rfam:RF00080;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	920604	921407	.	+	.	ID=GCA000160335_00870_gene;locus_tag=GCA000160335_00870;gene=terC
contig_1	Pyrodigal	CDS	920604	921407	.	+	0	ID=GCA000160335_00870;Name=TerC family protein;locus_tag=GCA000160335_00870;product=TerC family protein;gene=terC;Parent=GCA000160335_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_000928413.1,SO:0001217,UniParc:UPI00000CABC2,UniRef:UniRef100_Q2FZP3,UniRef:UniRef50_O34997,UniRef:UniRef90_Q2FZP3
contig_1	Pyrodigal	gene	921641	923950	.	+	.	ID=GCA000160335_00871_gene;locus_tag=GCA000160335_00871;gene=degQ
contig_1	Pyrodigal	CDS	921641	923950	.	+	0	ID=GCA000160335_00871;Name=Serine protease HtrA-like;locus_tag=GCA000160335_00871;product=Serine protease HtrA-like;Dbxref=GO:0004252,GO:0005886,GO:0006508;gene=degQ;Parent=GCA000160335_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,SO:0001217,UniParc:UPI00003B1566,UniRef:UniRef100_Q6GI62,UniRef:UniRef50_Q2FZP2,UniRef:UniRef90_Q2FZP2;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	923967	925325	.	+	.	ID=GCA000160335_00872_gene;locus_tag=GCA000160335_00872;gene=trkG
contig_1	Pyrodigal	CDS	923967	925325	.	+	0	ID=GCA000160335_00872;Name=K+-transporting ATPase;locus_tag=GCA000160335_00872;product=K+-transporting ATPase;gene=trkG;Parent=GCA000160335_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_000021872.1,SO:0001217,UniParc:UPI00003B1567,UniRef:UniRef100_A0A7Z7QYE8,UniRef:UniRef50_O31658,UniRef:UniRef90_A0A7U7JTZ2
contig_1	Pyrodigal	gene	925461	926975	.	+	.	ID=GCA000160335_00873_gene;locus_tag=GCA000160335_00873;gene=ushA
contig_1	Pyrodigal	CDS	925461	926975	.	+	0	ID=GCA000160335_00873;Name=5'-Nucleotidase C-terminal domain-containing protein;locus_tag=GCA000160335_00873;product=5'-Nucleotidase C-terminal domain-containing protein;gene=ushA;Parent=GCA000160335_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,SO:0001217,UniParc:UPI00003B1568,UniRef:UniRef100_A0A7Z7W175,UniRef:UniRef50_A0A380G340,UniRef:UniRef90_Q2FZP0
contig_1	tRNAscan-SE	gene	927157	927245	.	-	.	ID=GCA000160335_00874_gene;locus_tag=GCA000160335_00874;gene=trnS
contig_1	tRNAscan-SE	tRNA	927157	927245	.	-	.	ID=GCA000160335_00874;Name=tRNA-Ser(gct);locus_tag=GCA000160335_00874;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000160335_00874_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	927248	927322	.	-	.	ID=GCA000160335_00875_gene;locus_tag=GCA000160335_00875;gene=trnN
contig_1	tRNAscan-SE	tRNA	927248	927322	.	-	.	ID=GCA000160335_00875;Name=tRNA-Asn(gtt);locus_tag=GCA000160335_00875;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000160335_00875_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	927464	928033	.	-	.	ID=GCA000160335_00876_gene;locus_tag=GCA000160335_00876;gene=comK
contig_1	Pyrodigal	CDS	927464	928033	.	-	0	ID=GCA000160335_00876;Name=Competence protein ComK;locus_tag=GCA000160335_00876;product=Competence protein ComK;gene=comK;Parent=GCA000160335_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4903,COG:K,RefSeq:WP_000287265.1,SO:0001217,UniParc:UPI00000D7742,UniRef:UniRef100_Q2FZN9,UniRef:UniRef50_Q2FZN9,UniRef:UniRef90_Q2FZN9
contig_1	Pyrodigal	gene	928243	928461	.	+	.	ID=GCA000160335_00877_gene;locus_tag=GCA000160335_00877
contig_1	Pyrodigal	CDS	928243	928461	.	+	0	ID=GCA000160335_00877;Name=IDEAL domain-containing protein;locus_tag=GCA000160335_00877;product=IDEAL domain-containing protein;Parent=GCA000160335_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000876825.1,SO:0001217,UniParc:UPI00019CD546,UniRef:UniRef100_A0A7U7ICJ3,UniRef:UniRef50_Q2FZN8,UniRef:UniRef90_Q2FZN8
contig_1	Pyrodigal	gene	928542	929528	.	-	.	ID=GCA000160335_00878_gene;locus_tag=GCA000160335_00878;gene=lplA
contig_1	Pyrodigal	CDS	928542	929528	.	-	0	ID=GCA000160335_00878;Name=Lipoate--protein ligase 1;locus_tag=GCA000160335_00878;product=Lipoate--protein ligase 1;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000160335_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000668820.1,SO:0001217,UniParc:UPI0000054AE9,UniRef:UniRef100_Q2FZN7,UniRef:UniRef50_O07608,UniRef:UniRef90_A0A0H3JR16;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	929727	929903	.	+	.	ID=GCA000160335_00879_gene;locus_tag=GCA000160335_00879;gene=ykvS
contig_1	Pyrodigal	CDS	929727	929903	.	+	0	ID=GCA000160335_00879;Name=DUF2187 domain-containing protein;locus_tag=GCA000160335_00879;product=DUF2187 domain-containing protein;gene=ykvS;Parent=GCA000160335_00879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4873,COG:S,RefSeq:WP_000214898.1,SO:0001217,UniParc:UPI0000054AE8,UniRef:UniRef100_Q2FZN6,UniRef:UniRef50_Q2FZN6,UniRef:UniRef90_Q2FZN6
contig_1	Pyrodigal	gene	929918	930520	.	+	.	ID=GCA000160335_00880_gene;locus_tag=GCA000160335_00880
contig_1	Pyrodigal	CDS	929918	930520	.	+	0	ID=GCA000160335_00880;Name=CPBP family intramembrane metalloprotease;locus_tag=GCA000160335_00880;product=CPBP family intramembrane metalloprotease;Parent=GCA000160335_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033867.1,SO:0001217,UniParc:UPI0000054AE7,UniRef:UniRef100_Q2FZN5,UniRef:UniRef50_Q2FZN5,UniRef:UniRef90_Q2FZN5
contig_1	Infernal	gene	930681	930864	.	+	.	ID=GCA000160335_00881_gene;locus_tag=GCA000160335_00881;gene=rli28
contig_1	Infernal	ncRNA	930681	930864	5.1e-07	+	.	ID=GCA000160335_00881;Name=Listeria sRNA rli28;locus_tag=GCA000160335_00881;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000160335_00881_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Bakta	gene	930821	930898	.	+	.	ID=GCA000160335_00882_gene;locus_tag=GCA000160335_00882;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	930821	930898	.	+	0	ID=GCA000160335_00882;Name=Holin-like toxin;locus_tag=GCA000160335_00882;product=Holin-like toxin;Parent=GCA000160335_00882_gene;Note=RefSeq:WP_099119695.1,SO:0001217,UniParc:UPI000C03D0C2,UniRef:UniRef100_A0AAP7YW19,UniRef:UniRef50_Q2FZN4,UniRef:UniRef90_Q2FZN4
contig_1	Pyrodigal	gene	931864	933828	.	+	.	ID=GCA000160335_00883_gene;locus_tag=GCA000160335_00883
contig_1	Pyrodigal	CDS	931864	933828	.	+	0	ID=GCA000160335_00883;Name=Bacteriocin-associated integral membrane family protein;locus_tag=GCA000160335_00883;product=Bacteriocin-associated integral membrane family protein;Parent=GCA000160335_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4652,COG:S,RefSeq:WP_000870822.1,SO:0001217,UniParc:UPI0001B70194,UniRef:UniRef100_UPI0001B70194,UniRef:UniRef50_Q2FZN2,UniRef:UniRef90_Q2FZN2
contig_1	Pyrodigal	gene	933831	934151	.	+	.	ID=GCA000160335_00884_gene;locus_tag=GCA000160335_00884;gene=yxeA
contig_1	Pyrodigal	CDS	933831	934151	.	+	0	ID=GCA000160335_00884;Name=YxeA family protein;locus_tag=GCA000160335_00884;product=YxeA family protein;gene=yxeA;Parent=GCA000160335_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000873929.1,SO:0001217,UniParc:UPI00003B156D,UniRef:UniRef100_A0A090N182,UniRef:UniRef50_G5JID0,UniRef:UniRef90_Q2FZN1
contig_1	Pyrodigal	gene	934148	934789	.	+	.	ID=GCA000160335_00885_gene;locus_tag=GCA000160335_00885;gene=lolD
contig_1	Pyrodigal	CDS	934148	934789	.	+	0	ID=GCA000160335_00885;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_00885;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000160335_00885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000571183.1,SO:0001217,UniParc:UPI00019F4D88,UniRef:UniRef100_A0A7Z7QXW1,UniRef:UniRef50_A0A390FES4,UniRef:UniRef90_A0A390FES4
contig_1	Pyrodigal	gene	935509	935796	.	+	.	ID=GCA000160335_00886_gene;locus_tag=GCA000160335_00886
contig_1	Pyrodigal	CDS	935509	935796	.	+	0	ID=GCA000160335_00886;Name=Phage protein;locus_tag=GCA000160335_00886;product=Phage protein;Parent=GCA000160335_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000410718.1,SO:0001217,UniParc:UPI00003B1571,UniRef:UniRef100_A0A0E1X6Y5,UniRef:UniRef50_Q2FZM8,UniRef:UniRef90_Q2FZM8
contig_1	Pyrodigal	gene	935802	937283	.	+	.	ID=GCA000160335_00887_gene;locus_tag=GCA000160335_00887;gene=tarM
contig_1	Pyrodigal	CDS	935802	937283	.	+	0	ID=GCA000160335_00887;Name=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;locus_tag=GCA000160335_00887;product=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0047269,GO:0071555;gene=tarM;Parent=GCA000160335_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000719183.1,SO:0001217,UniParc:UPI00019CD508,UniRef:UniRef100_A0AAJ5CT77,UniRef:UniRef50_A0A0H2WWV6,UniRef:UniRef90_A0A0H2WWV6;ec_number=2.4.1.70
contig_1	Pyrodigal	gene	937373	937729	.	-	.	ID=GCA000160335_00888_gene;locus_tag=GCA000160335_00888;gene=doxX
contig_1	Pyrodigal	CDS	937373	937729	.	-	0	ID=GCA000160335_00888;Name=DoxX family protein;locus_tag=GCA000160335_00888;product=DoxX family protein;gene=doxX;Parent=GCA000160335_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_000766009.1,SO:0001217,UniParc:UPI00000D77EC,UniRef:UniRef100_Q2FZM5,UniRef:UniRef50_Q2FZM5,UniRef:UniRef90_Q2FZM5
contig_1	Pyrodigal	gene	938220	939179	.	+	.	ID=GCA000160335_00889_gene;locus_tag=GCA000160335_00889;gene=fecB
contig_1	Pyrodigal	CDS	938220	939179	.	+	0	ID=GCA000160335_00889;Name=ABC transporter substrate-binding protein;locus_tag=GCA000160335_00889;product=ABC transporter substrate-binding protein;gene=fecB;Parent=GCA000160335_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,RefSeq:WP_001081336.1,SO:0001217,UniParc:UPI0001B70195,UniRef:UniRef100_UPI0001B70195,UniRef:UniRef50_W8URT6,UniRef:UniRef90_W8URT6
contig_1	Pyrodigal	gene	939226	939342	.	-	.	ID=GCA000160335_00890_gene;locus_tag=GCA000160335_00890
contig_1	Pyrodigal	CDS	939226	939342	.	-	0	ID=GCA000160335_00890;Name=SAR1012 family small protein;locus_tag=GCA000160335_00890;product=SAR1012 family small protein;Parent=GCA000160335_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1573,UniRef:UniRef100_A0A317YL45,UniRef:UniRef50_Q2FZM3,UniRef:UniRef90_Q2FZM3
contig_1	Pyrodigal	gene	939421	939636	.	-	.	ID=GCA000160335_00891_gene;locus_tag=GCA000160335_00891;gene=tM2
contig_1	Pyrodigal	CDS	939421	939636	.	-	0	ID=GCA000160335_00891;Name=TM2 domain-containing protein;locus_tag=GCA000160335_00891;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000160335_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,RefSeq:WP_000867359.1,SO:0001217,UniParc:UPI00003B1574,UniRef:UniRef100_A0A0E1X8H7,UniRef:UniRef50_Q2FZM2,UniRef:UniRef90_Q2FZM2
contig_1	Pyrodigal	gene	939801	940352	.	+	.	ID=GCA000160335_00892_gene;locus_tag=GCA000160335_00892
contig_1	Pyrodigal	CDS	939801	940352	.	+	0	ID=GCA000160335_00892;Name=Acetyltransferase (GNAT family);locus_tag=GCA000160335_00892;product=Acetyltransferase (GNAT family);Parent=GCA000160335_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000620943.1,SO:0001217,UniParc:UPI00003B1575,UniRef:UniRef100_A0AB33V4Y7,UniRef:UniRef50_Q2FZM1,UniRef:UniRef90_A0AB33V4Y7
contig_1	Pyrodigal	gene	940404	941342	.	-	.	ID=GCA000160335_00893_gene;locus_tag=GCA000160335_00893;gene=menA
contig_1	Pyrodigal	CDS	940404	941342	.	-	0	ID=GCA000160335_00893;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA000160335_00893;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;gene=menA;Parent=GCA000160335_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,RefSeq:WP_000070966.1,SO:0001217,UniParc:UPI00000D77C6,UniRef:UniRef100_Q2FZM0,UniRef:UniRef50_Q2FZM0,UniRef:UniRef90_Q2FZM0;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	941524	942885	.	+	.	ID=GCA000160335_00894_gene;locus_tag=GCA000160335_00894;gene=menF
contig_1	Pyrodigal	CDS	941524	942885	.	+	0	ID=GCA000160335_00894;Name=isochorismate synthase;locus_tag=GCA000160335_00894;product=isochorismate synthase;gene=menF;Parent=GCA000160335_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,RefSeq:WP_000190608.1,SO:0001217,UniParc:UPI0001EFF0A6,UniRef:UniRef100_A0A0E1X936,UniRef:UniRef50_A0A6K1LZM7,UniRef:UniRef90_A0A0D1HF04
contig_1	Pyrodigal	gene	942872	944545	.	+	.	ID=GCA000160335_00895_gene;locus_tag=GCA000160335_00895;gene=menD
contig_1	Pyrodigal	CDS	942872	944545	.	+	0	ID=GCA000160335_00895;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000160335_00895;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000160335_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_000526678.1,SO:0001217,UniParc:UPI00003B1578,UniRef:UniRef100_Q6GI39,UniRef:UniRef50_Q8CPQ5,UniRef:UniRef90_Q2FZL7;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	944532	945335	.	+	.	ID=GCA000160335_00896_gene;locus_tag=GCA000160335_00896;gene=menH
contig_1	Pyrodigal	CDS	944532	945335	.	+	0	ID=GCA000160335_00896;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA000160335_00896;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA000160335_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000150205.1,SO:0001217,UniParc:UPI00003B1579,UniRef:UniRef100_A0A7Z7QY55,UniRef:UniRef50_A0A380H942,UniRef:UniRef90_A0A7Z7QY55;ec_number=4.2.99.20
contig_1	Pyrodigal	gene	945328	946149	.	+	.	ID=GCA000160335_00897_gene;locus_tag=GCA000160335_00897;gene=menB
contig_1	Pyrodigal	CDS	945328	946149	.	+	0	ID=GCA000160335_00897;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000160335_00897;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234;gene=menB;Parent=GCA000160335_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,KEGG:K01661,RefSeq:WP_000184947.1,SO:0001217,UniParc:UPI0000054A17,UniRef:UniRef100_Q5HH38,UniRef:UniRef50_Q5HH38,UniRef:UniRef90_Q5HH38;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	946385	946714	.	-	.	ID=GCA000160335_00898_gene;locus_tag=GCA000160335_00898;gene=sspC
contig_1	Pyrodigal	CDS	946385	946714	.	-	0	ID=GCA000160335_00898;Name=staphostatin B;locus_tag=GCA000160335_00898;product=staphostatin B;Dbxref=GO:0004869,GO:0005737;gene=sspC;Parent=GCA000160335_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000284457,KEGG:K23597,RefSeq:WP_000284455.1,SO:0001217,UniParc:UPI00003B157A,UniRef:UniRef100_Q6GI36,UniRef:UniRef50_Q9EYW6,UniRef:UniRef90_Q9EYW6
contig_1	Pyrodigal	gene	946752	947933	.	-	.	ID=GCA000160335_00899_gene;locus_tag=GCA000160335_00899;gene=sspB
contig_1	Pyrodigal	CDS	946752	947933	.	-	0	ID=GCA000160335_00899;Name=cysteine protease staphopain B;locus_tag=GCA000160335_00899;product=cysteine protease staphopain B;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=sspB;Parent=GCA000160335_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001088780,RefSeq:WP_001088793.1,SO:0001217,UniParc:UPI00002322F9,UniRef:UniRef100_P0C1S6,UniRef:UniRef50_Q2FZL3,UniRef:UniRef90_Q2FZL3;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	948015	949088	.	-	.	ID=GCA000160335_00900_gene;locus_tag=GCA000160335_00900;gene=sspA
contig_1	Pyrodigal	CDS	948015	949088	.	-	0	ID=GCA000160335_00900;Name=Glutamyl endopeptidase;locus_tag=GCA000160335_00900;product=Glutamyl endopeptidase;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=sspA;Parent=GCA000160335_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3591,COG:O,RefSeq:WP_000676568.1,SO:0001217,UniParc:UPI00000B77BF,UniRef:UniRef100_A0A7Z7QYI6,UniRef:UniRef50_Q2FZL2,UniRef:UniRef90_Q2FZL2;ec_number=3.4.21.19
contig_1	Pyrodigal	gene	949391	949579	.	+	.	ID=GCA000160335_00901_gene;locus_tag=GCA000160335_00901
contig_1	Pyrodigal	CDS	949391	949579	.	+	0	ID=GCA000160335_00901;Name=hypothetical protein;locus_tag=GCA000160335_00901;product=hypothetical protein;Parent=GCA000160335_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD504,UniRef:UniRef100_A0A7Z7W190,UniRef:UniRef50_A0A7Z7W190,UniRef:UniRef90_A0A7Z7W190
contig_1	Pyrodigal	gene	949615	950769	.	-	.	ID=GCA000160335_00902_gene;locus_tag=GCA000160335_00902;gene=aspB
contig_1	Pyrodigal	CDS	949615	950769	.	-	0	ID=GCA000160335_00902;Name=Aminotransferase;locus_tag=GCA000160335_00902;product=Aminotransferase;gene=aspB;Parent=GCA000160335_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,KEGG:K00841,RefSeq:WP_000777562.1,SO:0001217,UniParc:UPI00003B157D,UniRef:UniRef100_A0A7Z7W1C4,UniRef:UniRef50_Q4L550,UniRef:UniRef90_A0A0D6HV28;ec_number=2.6.1.-
contig_1	Pyrodigal	gene	950964	951974	.	-	.	ID=GCA000160335_00903_gene;locus_tag=GCA000160335_00903;gene=nolL
contig_1	Pyrodigal	CDS	950964	951974	.	-	0	ID=GCA000160335_00903;Name=Acyltransferase 3 domain-containing protein;locus_tag=GCA000160335_00903;product=Acyltransferase 3 domain-containing protein;gene=nolL;Parent=GCA000160335_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3594,COG:G,RefSeq:WP_000202434.1,SO:0001217,UniParc:UPI00019CD503,UniRef:UniRef100_A0A7Z7W1J4,UniRef:UniRef50_Q2FZL0,UniRef:UniRef90_Q2FZL0
contig_1	Pyrodigal	gene	952127	952546	.	+	.	ID=GCA000160335_00904_gene;locus_tag=GCA000160335_00904;gene=marR
contig_1	Pyrodigal	CDS	952127	952546	.	+	0	ID=GCA000160335_00904;Name=Transcriptional regulator%2C MarR family%2C putative;locus_tag=GCA000160335_00904;product=Transcriptional regulator%2C MarR family%2C putative;gene=marR;Parent=GCA000160335_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000278015.1,SO:0001217,UniParc:UPI0000054B7D,UniRef:UniRef100_Q2FZK9,UniRef:UniRef50_Q2FZK9,UniRef:UniRef90_Q2FZK9
contig_1	Pyrodigal	gene	952754	956527	.	-	.	ID=GCA000160335_00905_gene;locus_tag=GCA000160335_00905;gene=atl
contig_1	Pyrodigal	CDS	952754	956527	.	-	0	ID=GCA000160335_00905;Name=Bifunctional autolysin;locus_tag=GCA000160335_00905;product=Bifunctional autolysin;Dbxref=GO:0004040,GO:0005576,GO:0008745,GO:0009253,GO:0033925,GO:0071555;gene=atl;Parent=GCA000160335_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5632,COG:M,RefSeq:WP_001074519.1,SO:0001217,UniParc:UPI00003B157E,UniRef:UniRef100_Q6GI31,UniRef:UniRef50_P0C5Z8,UniRef:UniRef90_P0C5Z8
contig_1	Pyrodigal	gene	956754	957188	.	-	.	ID=GCA000160335_00906_gene;locus_tag=GCA000160335_00906;gene=elaA
contig_1	Pyrodigal	CDS	956754	957188	.	-	0	ID=GCA000160335_00906;Name=Putative acetyltransferase MW0937;locus_tag=GCA000160335_00906;product=Putative acetyltransferase MW0937;Dbxref=GO:0004343,GO:0016747;gene=elaA;Parent=GCA000160335_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2153,COG:R,KEGG:K02348,RefSeq:WP_000491975.1,SO:0001217,UniParc:UPI00003B157F,UniRef:UniRef100_Q6GI30,UniRef:UniRef50_Q5HH30,UniRef:UniRef90_Q5HH30;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	957344	957814	.	-	.	ID=GCA000160335_00907_gene;locus_tag=GCA000160335_00907
contig_1	Pyrodigal	CDS	957344	957814	.	-	0	ID=GCA000160335_00907;Name=osmotic stress response protein;locus_tag=GCA000160335_00907;product=osmotic stress response protein;Parent=GCA000160335_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000088431,RefSeq:WP_000088437.1,SO:0001217,UniParc:UPI00003B1580,UniRef:UniRef100_A0A0E1X6W4,UniRef:UniRef50_P0A0Q4,UniRef:UniRef90_P0A0Q4
contig_1	Pyrodigal	gene	957862	959088	.	-	.	ID=GCA000160335_00908_gene;locus_tag=GCA000160335_00908;gene=cps2a
contig_1	Pyrodigal	CDS	957862	959088	.	-	0	ID=GCA000160335_00908;Name=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;locus_tag=GCA000160335_00908;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;gene=cps2a;Parent=GCA000160335_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001031978,COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_001031977.1,SO:0001217,UniParc:UPI00003B1581,UniRef:UniRef100_A0A7Z7QXX3,UniRef:UniRef50_P52078,UniRef:UniRef90_P52078;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	959529	960722	.	+	.	ID=GCA000160335_00909_gene;locus_tag=GCA000160335_00909;gene=fmtA
contig_1	Pyrodigal	CDS	959529	960722	.	+	0	ID=GCA000160335_00909;Name=teichoic acid D-Ala esterase FmtA;locus_tag=GCA000160335_00909;product=teichoic acid D-Ala esterase FmtA;Dbxref=GO:0005886,GO:0016787,GO:0046677,GO:0071555;gene=fmtA;Parent=GCA000160335_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671243,COG:COG1680,COG:V,RefSeq:WP_000671257.1,SO:0001217,UniParc:UPI00019F4D74,UniRef:UniRef100_A0A7Z7QY10,UniRef:UniRef50_Q2FZK3,UniRef:UniRef90_Q2FZK3;ec_number=3.1.1.103
contig_1	Pyrodigal	gene	961065	961355	.	-	.	ID=GCA000160335_00910_gene;locus_tag=GCA000160335_00910;gene=qoxD
contig_1	Pyrodigal	CDS	961065	961355	.	-	0	ID=GCA000160335_00910;Name=cytochrome aa3 quinol oxidase subunit IV;locus_tag=GCA000160335_00910;product=cytochrome aa3 quinol oxidase subunit IV;Dbxref=GO:0005886,GO:0009319,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxD;Parent=GCA000160335_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3125,KEGG:K02829,SO:0001217,UniParc:UPI00003B1583,UniRef:UniRef100_Q6GI26,UniRef:UniRef50_Q2FZK2,UniRef:UniRef90_Q2FZK2;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	961352	961957	.	-	.	ID=GCA000160335_00911_gene;locus_tag=GCA000160335_00911;gene=qoxC
contig_1	Pyrodigal	CDS	961352	961957	.	-	0	ID=GCA000160335_00911;Name=cytochrome aa3 quinol oxidase subunit III;locus_tag=GCA000160335_00911;product=cytochrome aa3 quinol oxidase subunit III;Dbxref=GO:0004129,GO:0005886,GO:0009055,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxC;Parent=GCA000160335_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1845,RefSeq:WP_000017736.1,SO:0001217,UniParc:UPI0000054B75,UniRef:UniRef100_Q2FZK1,UniRef:UniRef50_P34958,UniRef:UniRef90_Q2FZK1;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	961947	963935	.	-	.	ID=GCA000160335_00912_gene;locus_tag=GCA000160335_00912;gene=qoxB
contig_1	Pyrodigal	CDS	961947	963935	.	-	0	ID=GCA000160335_00912;Name=cytochrome aa3 quinol oxidase subunit I;locus_tag=GCA000160335_00912;product=cytochrome aa3 quinol oxidase subunit I;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0006119,GO:0015990,GO:0016020,GO:0016682,GO:0020037,GO:0022904;gene=qoxB;Parent=GCA000160335_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0843,KEGG:K02827,RefSeq:WP_001010762.1,SO:0001217,UniParc:UPI0000054B74,UniRef:UniRef100_Q2FZK0,UniRef:UniRef50_E0TW66,UniRef:UniRef90_Q2FZK0;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	963935	965035	.	-	.	ID=GCA000160335_00913_gene;locus_tag=GCA000160335_00913;gene=qoxA
contig_1	Pyrodigal	CDS	963935	965035	.	-	0	ID=GCA000160335_00913;Name=cytochrome aa3 quinol oxidase subunit II;locus_tag=GCA000160335_00913;product=cytochrome aa3 quinol oxidase subunit II;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0042773;gene=qoxA;Parent=GCA000160335_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1622,KEGG:K02826,RefSeq:WP_000032836.1,SO:0001217,UniParc:UPI00000D7857,UniRef:UniRef100_Q2FZJ9,UniRef:UniRef50_Q2FZJ9,UniRef:UniRef90_Q2FZJ9;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	965607	965924	.	-	.	ID=GCA000160335_00914_gene;locus_tag=GCA000160335_00914
contig_1	Pyrodigal	CDS	965607	965924	.	-	0	ID=GCA000160335_00914;Name=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;locus_tag=GCA000160335_00914;product=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;Parent=GCA000160335_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037831.1,SO:0001217,UniParc:UPI0000054B71,UniRef:UniRef100_Q2FZJ7,UniRef:UniRef50_Q2FZJ7,UniRef:UniRef90_Q2FZJ7
contig_1	Infernal	gene	966285	966533	.	+	.	ID=GCA000160335_00915_gene;locus_tag=GCA000160335_00915;gene=S35
contig_1	Infernal	ncRNA	966285	966533	5.7e-15	+	.	ID=GCA000160335_00915;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00915;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00915_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	966706	967566	.	-	.	ID=GCA000160335_00916_gene;locus_tag=GCA000160335_00916;gene=folD
contig_1	Pyrodigal	CDS	966706	967566	.	-	0	ID=GCA000160335_00916;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA000160335_00916;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999;gene=folD;Parent=GCA000160335_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000225845.1,SO:0001217,UniParc:UPI00003B1585,UniRef:UniRef100_Q6GI21,UniRef:UniRef50_Q2FZJ6,UniRef:UniRef90_Q6GI21
contig_1	Pyrodigal	gene	967767	968249	.	+	.	ID=GCA000160335_00917_gene;locus_tag=GCA000160335_00917;gene=purE
contig_1	Pyrodigal	CDS	967767	968249	.	+	0	ID=GCA000160335_00917;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000160335_00917;product=N5-carboxyaminoimidazole ribonucleotide mutase;gene=purE;Parent=GCA000160335_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0041,COG:F,RefSeq:WP_000861570.1,SO:0001217,UniParc:UPI00005FE3DA,UniRef:UniRef100_A0A7Z7W1K0,UniRef:UniRef50_P43849,UniRef:UniRef90_Q2FZJ5
contig_1	Pyrodigal	gene	968236	969360	.	+	.	ID=GCA000160335_00918_gene;locus_tag=GCA000160335_00918;gene=purK
contig_1	Pyrodigal	CDS	968236	969360	.	+	0	ID=GCA000160335_00918;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000160335_00918;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000160335_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0026,COG:F,RefSeq:WP_001010391.1,SO:0001217,UniParc:UPI00003B1587,UniRef:UniRef100_Q6GI19,UniRef:UniRef50_Q49WI9,UniRef:UniRef90_Q99V32;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	969364	970068	.	+	.	ID=GCA000160335_00919_gene;locus_tag=GCA000160335_00919;gene=purC
contig_1	Pyrodigal	CDS	969364	970068	.	+	0	ID=GCA000160335_00919;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000160335_00919;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0006164,GO:0006189,GO:0009236;gene=purC;Parent=GCA000160335_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0152,COG:F,RefSeq:WP_000174050.1,SO:0001217,UniParc:UPI00019CD654,UniRef:UniRef100_A0A7Z7W2E8,UniRef:UniRef50_Q81IQ6,UniRef:UniRef90_Q2FZJ3;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	970068	970331	.	+	.	ID=GCA000160335_00920_gene;locus_tag=GCA000160335_00920;gene=purS
contig_1	Pyrodigal	CDS	970068	970331	.	+	0	ID=GCA000160335_00920;Name=phosphoribosylformylglycinamidine synthase subunit PurS;locus_tag=GCA000160335_00920;product=phosphoribosylformylglycinamidine synthase subunit PurS;gene=purS;Parent=GCA000160335_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1828,COG:F,RefSeq:WP_000848351.1,SO:0001217,UniParc:UPI00003B1589,UniRef:UniRef100_A0A7Z7QXZ2,UniRef:UniRef50_A0A239ZQS9,UniRef:UniRef90_Q2FZJ2;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	970333	971004	.	+	.	ID=GCA000160335_00921_gene;locus_tag=GCA000160335_00921;gene=purQ
contig_1	Pyrodigal	CDS	970333	971004	.	+	0	ID=GCA000160335_00921;Name=phosphoribosylformylglycinamidine synthase I;locus_tag=GCA000160335_00921;product=phosphoribosylformylglycinamidine synthase I;Dbxref=GO:0004359,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purQ;Parent=GCA000160335_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0047,COG:F,RefSeq:WP_000666808.1,SO:0001217,UniParc:UPI00003B158A,UniRef:UniRef100_Q6GI16,UniRef:UniRef50_P12041,UniRef:UniRef90_Q2FZJ1;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	970997	973186	.	+	.	ID=GCA000160335_00922_gene;locus_tag=GCA000160335_00922;gene=purL
contig_1	Pyrodigal	CDS	970997	973186	.	+	0	ID=GCA000160335_00922;Name=phosphoribosylformylglycinamidine synthase subunit PurL;locus_tag=GCA000160335_00922;product=phosphoribosylformylglycinamidine synthase subunit PurL;Dbxref=GO:0000287,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purL;Parent=GCA000160335_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0046,COG:F,KEGG:K23269,RefSeq:WP_000032734.1,SO:0001217,UniParc:UPI00003B158B,UniRef:UniRef100_Q6GI15,UniRef:UniRef50_Q2FZJ0,UniRef:UniRef90_Q2FZJ0;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	973165	974649	.	+	.	ID=GCA000160335_00923_gene;locus_tag=GCA000160335_00923;gene=purF
contig_1	Pyrodigal	CDS	973165	974649	.	+	0	ID=GCA000160335_00923;Name=amidophosphoribosyltransferase;locus_tag=GCA000160335_00923;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0006189,GO:0009113;gene=purF;Parent=GCA000160335_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_000483708.1,SO:0001217,UniParc:UPI00019F4D71,UniRef:UniRef100_A0A7Z7QXY3,UniRef:UniRef50_Q5HQA0,UniRef:UniRef90_Q5HQA0;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	974642	975670	.	+	.	ID=GCA000160335_00924_gene;locus_tag=GCA000160335_00924;gene=purM
contig_1	Pyrodigal	CDS	974642	975670	.	+	0	ID=GCA000160335_00924;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000160335_00924;product=Phosphoribosylformylglycinamidine cyclo-ligase;Dbxref=GO:0004637,GO:0004641,GO:0005524,GO:0005829,GO:0006189,GO:0046084;gene=purM;Parent=GCA000160335_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_000030814.1,SO:0001217,UniParc:UPI00003B158D,UniRef:UniRef100_Q6GI13,UniRef:UniRef50_Q2FZI8,UniRef:UniRef90_Q2FZI8;ec_number=6.3.3.1
contig_1	Pyrodigal	gene	975673	976239	.	+	.	ID=GCA000160335_00925_gene;locus_tag=GCA000160335_00925;gene=purN
contig_1	Pyrodigal	CDS	975673	976239	.	+	0	ID=GCA000160335_00925;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000160335_00925;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0004644,GO:0005829,GO:0006189;gene=purN;Parent=GCA000160335_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0299,COG:F,RefSeq:WP_000238673.1,SO:0001217,UniParc:UPI00003B158E,UniRef:UniRef100_Q6GI12,UniRef:UniRef50_Q5HQ98,UniRef:UniRef90_P65897;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	976254	977732	.	+	.	ID=GCA000160335_00926_gene;locus_tag=GCA000160335_00926;gene=purH
contig_1	Pyrodigal	CDS	976254	977732	.	+	0	ID=GCA000160335_00926;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000160335_00926;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003824,GO:0003937,GO:0004643,GO:0005829,GO:0006164,GO:0006189;gene=purH;Parent=GCA000160335_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0138,COG:F,KEGG:K00602,RefSeq:WP_000709288.1,SO:0001217,UniParc:UPI00003B158F,UniRef:UniRef100_Q6GI11,UniRef:UniRef50_P67543,UniRef:UniRef90_P67543;ec_number=3.5.4.10
contig_1	Pyrodigal	gene	977754	979001	.	+	.	ID=GCA000160335_00927_gene;locus_tag=GCA000160335_00927;gene=purD
contig_1	Pyrodigal	CDS	977754	979001	.	+	0	ID=GCA000160335_00927;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000160335_00927;product=Phosphoribosylamine--glycine ligase;Dbxref=GO:0004637,GO:0005524,GO:0006189,GO:0009113,GO:0046872;gene=purD;Parent=GCA000160335_00927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0151,COG:F,RefSeq:WP_001101912.1,SO:0001217,UniParc:UPI00003B1590,UniRef:UniRef100_Q6GI10,UniRef:UniRef50_P65895,UniRef:UniRef90_P65895;ec_number=6.3.4.13
contig_1	Pyrodigal	gene	979269	980075	.	-	.	ID=GCA000160335_00928_gene;locus_tag=GCA000160335_00928;gene=ecfT
contig_1	Pyrodigal	CDS	979269	980075	.	-	0	ID=GCA000160335_00928;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000160335_00928;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000160335_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000273254.1,SO:0001217,UniParc:UPI00019CD650,UniRef:UniRef100_A0A7U7EUJ3,UniRef:UniRef50_S2XR66,UniRef:UniRef90_Q2FZI4
contig_1	Pyrodigal	gene	980068	981468	.	-	.	ID=GCA000160335_00929_gene;locus_tag=GCA000160335_00929;gene=ccmA
contig_1	Pyrodigal	CDS	980068	981468	.	-	0	ID=GCA000160335_00929;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA000160335_00929;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190;gene=ccmA;Parent=GCA000160335_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000921970.1,SO:0001217,UniParc:UPI00019F4D56,UniRef:UniRef100_A0A7Z7QYK6,UniRef:UniRef50_S2XKC2,UniRef:UniRef90_Q2FZI3;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	981483	982058	.	-	.	ID=GCA000160335_00930_gene;locus_tag=GCA000160335_00930;gene=ykoE
contig_1	Pyrodigal	CDS	981483	982058	.	-	0	ID=GCA000160335_00930;Name=Thiamine ABC transporter permease;locus_tag=GCA000160335_00930;product=Thiamine ABC transporter permease;gene=ykoE;Parent=GCA000160335_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4721,COG:H,KEGG:K16925,RefSeq:WP_000033477.1,SO:0001217,UniParc:UPI0000054B61,UniRef:UniRef100_Q2FZI2,UniRef:UniRef50_Q2FZI2,UniRef:UniRef90_Q2FZI2
contig_1	Infernal	regulatory_region	982135	982235	4.4e-12	-	.	ID=HBCHLJIIAO_165;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	982642	982776	.	-	.	ID=GCA000160335_00931_gene;locus_tag=GCA000160335_00931;gene=graF
contig_1	Pyrodigal	CDS	982642	982776	.	-	0	ID=GCA000160335_00931;Name=glycopeptide resistance-associated protein GraF;locus_tag=GCA000160335_00931;product=glycopeptide resistance-associated protein GraF;gene=graF;Parent=GCA000160335_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000064214.1,SO:0001217,UniParc:UPI0000054B60,UniRef:UniRef100_Q2FZI0,UniRef:UniRef50_Q2FZI0,UniRef:UniRef90_Q2FZI0
contig_1	Pyrodigal	gene	982928	984223	.	+	.	ID=GCA000160335_00932_gene;locus_tag=GCA000160335_00932;gene=auxA
contig_1	Pyrodigal	CDS	982928	984223	.	+	0	ID=GCA000160335_00932;Name=Membrane spanning protein;locus_tag=GCA000160335_00932;product=Membrane spanning protein;gene=auxA;Parent=GCA000160335_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009075.1,SO:0001217,UniParc:UPI00003B1593,UniRef:UniRef100_A0A7Z7W1K6,UniRef:UniRef50_A0A1E9A5G9,UniRef:UniRef90_Q2FZH9
contig_1	Infernal	gene	983681	983808	.	-	.	ID=GCA000160335_00933_gene;locus_tag=GCA000160335_00933;gene=sau-59
contig_1	Infernal	ncRNA	983681	983808	5.3e-23	-	.	ID=GCA000160335_00933;Name=Staphylococcus sRNA sau-59;locus_tag=GCA000160335_00933;product=Staphylococcus sRNA sau-59;Dbxref=RFAM:RF02393;Parent=GCA000160335_00933_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02393
contig_1	Pyrodigal	gene	984648	985820	.	+	.	ID=GCA000160335_00934_gene;locus_tag=GCA000160335_00934;gene=rlmK
contig_1	Pyrodigal	CDS	984648	985820	.	+	0	ID=GCA000160335_00934;Name=Class I SAM-dependent rRNA methyltransferase;locus_tag=GCA000160335_00934;product=Class I SAM-dependent rRNA methyltransferase;gene=rlmK;Parent=GCA000160335_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,RefSeq:WP_000685076.1,SO:0001217,UniParc:UPI00019F4D54,UniRef:UniRef100_A0A7Z7W181,UniRef:UniRef50_Q2FZH8,UniRef:UniRef90_Q2FZH8
contig_1	Pyrodigal	gene	985874	986416	.	+	.	ID=GCA000160335_00935_gene;locus_tag=GCA000160335_00935
contig_1	Pyrodigal	CDS	985874	986416	.	+	0	ID=GCA000160335_00935;Name=DUF697 domain-containing protein;locus_tag=GCA000160335_00935;product=DUF697 domain-containing protein;Parent=GCA000160335_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000505964.1,SO:0001217,UniParc:UPI00003B1595,UniRef:UniRef100_A0A7Z7W2F6,UniRef:UniRef50_A0AAE5M2R9,UniRef:UniRef90_Q2FZH7
contig_1	Pyrodigal	gene	986570	986836	.	+	.	ID=GCA000160335_00936_gene;locus_tag=GCA000160335_00936;gene=ptsH
contig_1	Pyrodigal	CDS	986570	986836	.	+	0	ID=GCA000160335_00936;Name=phosphocarrier protein HPr;locus_tag=GCA000160335_00936;product=phosphocarrier protein HPr;Dbxref=GO:0005737,GO:0009401;gene=ptsH;Parent=GCA000160335_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_000437472.1,SO:0001217,UniParc:UPI00001328F8,UniRef:UniRef100_Q5HH02,UniRef:UniRef50_Q9F166,UniRef:UniRef90_Q5HH02
contig_1	Pyrodigal	gene	986839	988557	.	+	.	ID=GCA000160335_00937_gene;locus_tag=GCA000160335_00937;gene=ptsI
contig_1	Pyrodigal	CDS	986839	988557	.	+	0	ID=GCA000160335_00937;Name=Phosphoenolpyruvate-protein phosphotransferase;locus_tag=GCA000160335_00937;product=Phosphoenolpyruvate-protein phosphotransferase;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872;gene=ptsI;Parent=GCA000160335_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_000040043.1,SO:0001217,UniParc:UPI00019F4D53,UniRef:UniRef100_A0A7Z7QYH7,UniRef:UniRef50_P23533,UniRef:UniRef90_Q99V14;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	988794	989027	.	-	.	ID=GCA000160335_00938_gene;locus_tag=GCA000160335_00938;gene=nrdH
contig_1	Pyrodigal	CDS	988794	989027	.	-	0	ID=GCA000160335_00938;Name=glutaredoxin-like protein NrdH;locus_tag=GCA000160335_00938;product=glutaredoxin-like protein NrdH;gene=nrdH;Parent=GCA000160335_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001289614,COG:COG0695,COG:O,RefSeq:WP_001289622.1,SO:0001217,UniParc:UPI00003B1597,UniRef:UniRef100_A0A7Z7QXW3,UniRef:UniRef50_Q2FZH4,UniRef:UniRef90_Q2FZH4
contig_1	Pyrodigal	gene	989225	990586	.	+	.	ID=GCA000160335_00939_gene;locus_tag=GCA000160335_00939;gene=appC
contig_1	Pyrodigal	CDS	989225	990586	.	+	0	ID=GCA000160335_00939;Name=Putative cytochrome bd menaquinol oxidase subunit I;locus_tag=GCA000160335_00939;product=Putative cytochrome bd menaquinol oxidase subunit I;gene=appC;Parent=GCA000160335_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_000381855.1,SO:0001217,UniParc:UPI00003B1598,UniRef:UniRef100_A0AAJ4YXF2,UniRef:UniRef50_A0A2S5D5L8,UniRef:UniRef90_A0A7U7PY91;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	990583	991602	.	+	.	ID=GCA000160335_00940_gene;locus_tag=GCA000160335_00940;gene=appB
contig_1	Pyrodigal	CDS	990583	991602	.	+	0	ID=GCA000160335_00940;Name=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;locus_tag=GCA000160335_00940;product=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;gene=appB;Parent=GCA000160335_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_000638453.1,SO:0001217,UniParc:UPI00000D9D70,UniRef:UniRef100_A0A4T9YQ33,UniRef:UniRef50_A0AAJ5RM05,UniRef:UniRef90_Q2FZH2;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	991735	992397	.	+	.	ID=GCA000160335_00941_gene;locus_tag=GCA000160335_00941;gene=trkA
contig_1	Pyrodigal	CDS	991735	992397	.	+	0	ID=GCA000160335_00941;Name=TrkA family potassium uptake protein;locus_tag=GCA000160335_00941;product=TrkA family potassium uptake protein;gene=trkA;Parent=GCA000160335_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000514290.1,SO:0001217,UniParc:UPI0000054B56,UniRef:UniRef100_Q2FZH1,UniRef:UniRef50_Q2FZH1,UniRef:UniRef90_Q2FZH1
contig_1	Infernal	gene	992388	992654	.	+	.	ID=GCA000160335_00942_gene;locus_tag=GCA000160335_00942;gene=S35
contig_1	Infernal	ncRNA	992388	992654	9.6e-30	+	.	ID=GCA000160335_00942;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_00942;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_00942_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	992745	994442	.	-	.	ID=GCA000160335_00943_gene;locus_tag=GCA000160335_00943;gene=rnjA
contig_1	Pyrodigal	CDS	992745	994442	.	-	0	ID=GCA000160335_00943;Name=ribonuclease J1;locus_tag=GCA000160335_00943;product=ribonuclease J1;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnjA;Parent=GCA000160335_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000811375.1,SO:0001217,UniParc:UPI0000054B55,UniRef:UniRef100_Q2FZG9,UniRef:UniRef50_Q2FZG9,UniRef:UniRef90_Q2FZG9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	994442	994660	.	-	.	ID=GCA000160335_00944_gene;locus_tag=GCA000160335_00944;gene=rpoY
contig_1	Pyrodigal	CDS	994442	994660	.	-	0	ID=GCA000160335_00944;Name=DNA-directed RNA polymerase subunit epsilon;locus_tag=GCA000160335_00944;product=DNA-directed RNA polymerase subunit epsilon;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677;gene=rpoY;Parent=GCA000160335_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5503,COG:KV,RefSeq:WP_000257888.1,SO:0001217,UniParc:UPI0000054B54,UniRef:UniRef100_Q2FZG8,UniRef:UniRef50_Q2FZG8,UniRef:UniRef90_Q2FZG8;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	995142	995693	.	-	.	ID=GCA000160335_00945_gene;locus_tag=GCA000160335_00945;gene=def
contig_1	Pyrodigal	CDS	995142	995693	.	-	0	ID=GCA000160335_00945;Name=peptide deformylase;locus_tag=GCA000160335_00945;product=peptide deformylase;Dbxref=GO:0006412,GO:0036211,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000160335_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000957036.1,SO:0001217,UniParc:UPI00000D9D72,UniRef:UniRef100_Q5HGZ3,UniRef:UniRef50_Q45495,UniRef:UniRef90_Q5HGZ3;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	996058	996684	.	+	.	ID=GCA000160335_00946_gene;locus_tag=GCA000160335_00946
contig_1	Pyrodigal	CDS	996058	996684	.	+	0	ID=GCA000160335_00946;Name=Lipoprotein;locus_tag=GCA000160335_00946;product=Lipoprotein;Parent=GCA000160335_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000668339.1,SO:0001217,UniParc:UPI00000D9D73,UniRef:UniRef100_Q2FZG5,UniRef:UniRef50_Q2FZG5,UniRef:UniRef90_Q2FZG5
contig_1	Pyrodigal	gene	996855	997967	.	+	.	ID=GCA000160335_00947_gene;locus_tag=GCA000160335_00947;gene=pdhA
contig_1	Pyrodigal	CDS	996855	997967	.	+	0	ID=GCA000160335_00947;Name=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;locus_tag=GCA000160335_00947;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;Dbxref=GO:0004739,GO:0006086,GO:0009083,GO:0045254;gene=pdhA;Parent=GCA000160335_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000035325.1,SO:0001217,UniParc:UPI00003B1599,UniRef:UniRef100_Q6GHZ2,UniRef:UniRef50_P21881,UniRef:UniRef90_Q5HGZ1;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	997971	998948	.	+	.	ID=GCA000160335_00948_gene;locus_tag=GCA000160335_00948;gene=pdhB
contig_1	Pyrodigal	CDS	997971	998948	.	+	0	ID=GCA000160335_00948;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000160335_00948;product=Pyruvate dehydrogenase E1 component subunit beta;Dbxref=GO:0004739;gene=pdhB;Parent=GCA000160335_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_000068176.1,SO:0001217,UniParc:UPI0000054B50,UniRef:UniRef100_P0A0A1,UniRef:UniRef50_Q5HQ75,UniRef:UniRef90_Q5HQ75;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	999039	1000331	.	+	.	ID=GCA000160335_00949_gene;locus_tag=GCA000160335_00949;gene=pdhC
contig_1	Pyrodigal	CDS	999039	1000331	.	+	0	ID=GCA000160335_00949;Name=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000160335_00949;product=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;Dbxref=GO:0004742,GO:0005737,GO:0031405;gene=pdhC;Parent=GCA000160335_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000863437.1,SO:0001217,UniParc:UPI00003B159A,UniRef:UniRef100_Q6GHZ0,UniRef:UniRef50_P21883,UniRef:UniRef90_P65635;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	1000335	1001741	.	+	.	ID=GCA000160335_00950_gene;locus_tag=GCA000160335_00950;gene=lpdA
contig_1	Pyrodigal	CDS	1000335	1001741	.	+	0	ID=GCA000160335_00950;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000160335_00950;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0016020,GO:0050660;gene=lpdA;Parent=GCA000160335_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_000260117.1,SO:0001217,UniParc:UPI0000129471,UniRef:UniRef100_Q5HGY8,UniRef:UniRef50_P11959,UniRef:UniRef90_Q5HGY8;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1001912	1002187	.	+	.	ID=GCA000160335_00951_gene;locus_tag=GCA000160335_00951;gene=yktA
contig_1	Pyrodigal	CDS	1001912	1002187	.	+	0	ID=GCA000160335_00951;Name=UPF0223 protein SaurJH1_1179;locus_tag=GCA000160335_00951;product=UPF0223 protein SaurJH1_1179;gene=yktA;Parent=GCA000160335_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4476,COG:S,RefSeq:WP_000455584.1,SO:0001217,UniParc:UPI00003B159B,UniRef:UniRef100_Q6GHY8,UniRef:UniRef50_Q2G2A2,UniRef:UniRef90_Q2G2A2
contig_1	Pyrodigal	gene	1002331	1002870	.	+	.	ID=GCA000160335_00952_gene;locus_tag=GCA000160335_00952;gene=qdoI
contig_1	Pyrodigal	CDS	1002331	1002870	.	+	0	ID=GCA000160335_00952;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_00952;product=HTH cro/C1-type domain-containing protein;gene=qdoI;Parent=GCA000160335_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1917,COG:R,RefSeq:WP_001020627.1,SO:0001217,UniParc:UPI00003B159C,UniRef:UniRef100_A0A166NA88,UniRef:UniRef50_Q2G2A6,UniRef:UniRef90_Q2G2A6
contig_1	Pyrodigal	gene	1002883	1003977	.	+	.	ID=GCA000160335_00953_gene;locus_tag=GCA000160335_00953;gene=potA
contig_1	Pyrodigal	CDS	1002883	1003977	.	+	0	ID=GCA000160335_00953;Name=Spermidine/putrescine import ATP-binding protein PotA;locus_tag=GCA000160335_00953;product=Spermidine/putrescine import ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015417,GO:0016887,GO:0043190;gene=potA;Parent=GCA000160335_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000433551.1,SO:0001217,UniParc:UPI00000D7714,UniRef:UniRef100_Q2G2A7,UniRef:UniRef50_Q24XJ2,UniRef:UniRef90_Q2G2A7;ec_number=7.6.2.11
contig_1	Pyrodigal	gene	1003970	1004767	.	+	.	ID=GCA000160335_00954_gene;locus_tag=GCA000160335_00954;gene=potB
contig_1	Pyrodigal	CDS	1003970	1004767	.	+	0	ID=GCA000160335_00954;Name=Spermidine/putrescine ABC transporter-like protein;locus_tag=GCA000160335_00954;product=Spermidine/putrescine ABC transporter-like protein;gene=potB;Parent=GCA000160335_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_001246555.1,SO:0001217,UniParc:UPI00000CABE6,UniRef:UniRef100_A0A7Z7QY06,UniRef:UniRef50_S2XR89,UniRef:UniRef90_A0A7U7IE88
contig_1	Pyrodigal	gene	1004773	1005582	.	+	.	ID=GCA000160335_00955_gene;locus_tag=GCA000160335_00955;gene=potC
contig_1	Pyrodigal	CDS	1004773	1005582	.	+	0	ID=GCA000160335_00955;Name=ABC transporter permease;locus_tag=GCA000160335_00955;product=ABC transporter permease;gene=potC;Parent=GCA000160335_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_000872390.1,SO:0001217,UniParc:UPI00000D7872,UniRef:UniRef100_Q2G2A9,UniRef:UniRef50_S2XKD8,UniRef:UniRef90_A0A2K4AL30
contig_1	Pyrodigal	gene	1005582	1006655	.	+	.	ID=GCA000160335_00956_gene;locus_tag=GCA000160335_00956;gene=potD
contig_1	Pyrodigal	CDS	1005582	1006655	.	+	0	ID=GCA000160335_00956;Name=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;locus_tag=GCA000160335_00956;product=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;gene=potD;Parent=GCA000160335_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_000819679.1,SO:0001217,UniParc:UPI00003B159D,UniRef:UniRef100_A0A7Z7QY92,UniRef:UniRef50_Q5HQ67,UniRef:UniRef90_A0A390B6L2
contig_1	Pyrodigal	gene	1006729	1007748	.	+	.	ID=GCA000160335_00957_gene;locus_tag=GCA000160335_00957;gene=auxB
contig_1	Pyrodigal	CDS	1006729	1007748	.	+	0	ID=GCA000160335_00957;Name=lipoteichoic acid stability factor AuxB;locus_tag=GCA000160335_00957;product=lipoteichoic acid stability factor AuxB;gene=auxB;Parent=GCA000160335_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145497.1,SO:0001217,UniParc:UPI00019CD619,UniRef:UniRef100_A0A7Z7QYI1,UniRef:UniRef50_A0A974KWU6,UniRef:UniRef90_Q2G2G6
contig_1	Pyrodigal	gene	1008031	1008450	.	+	.	ID=GCA000160335_00958_gene;locus_tag=GCA000160335_00958
contig_1	Pyrodigal	CDS	1008031	1008450	.	+	0	ID=GCA000160335_00958;Name=DUF4064 domain-containing protein;locus_tag=GCA000160335_00958;product=DUF4064 domain-containing protein;Parent=GCA000160335_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080460.1,SO:0001217,UniParc:UPI00003B159F,UniRef:UniRef100_A0A7Z7QXY4,UniRef:UniRef50_Q2G2G5,UniRef:UniRef90_Q2G2G5
contig_1	Pyrodigal	gene	1008532	1009884	.	-	.	ID=GCA000160335_00959_gene;locus_tag=GCA000160335_00959;gene=mntH
contig_1	Pyrodigal	CDS	1008532	1009884	.	-	0	ID=GCA000160335_00959;Name=Nramp family divalent metal transporter;locus_tag=GCA000160335_00959;product=Nramp family divalent metal transporter;Dbxref=GO:0005384,GO:0005886,GO:0015086,GO:0015293,GO:0016020,GO:0022857,GO:0034755,GO:0046872,GO:0055085;gene=mntH;Parent=GCA000160335_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_001060841.1,SO:0001217,UniParc:UPI00019CD5E8,UniRef:UniRef100_A0A7Z7QYW1,UniRef:UniRef50_Q2G2G3,UniRef:UniRef90_Q2G2G3
contig_1	Pyrodigal	gene	1010068	1010682	.	-	.	ID=GCA000160335_00960_gene;locus_tag=GCA000160335_00960;gene=yktB
contig_1	Pyrodigal	CDS	1010068	1010682	.	-	0	ID=GCA000160335_00960;Name=UPF0637 protein MW0989;locus_tag=GCA000160335_00960;product=UPF0637 protein MW0989;gene=yktB;Parent=GCA000160335_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4493,COG:S,RefSeq:WP_000170614.1,SO:0001217,UniParc:UPI0001B70025,UniRef:UniRef100_UPI0001B70025,UniRef:UniRef50_Q2G2G7,UniRef:UniRef90_Q2G2G7
contig_1	Pyrodigal	gene	1010839	1011666	.	+	.	ID=GCA000160335_00961_gene;locus_tag=GCA000160335_00961;gene=suhB
contig_1	Pyrodigal	CDS	1010839	1011666	.	+	0	ID=GCA000160335_00961;Name=Inositol monophosphatase;locus_tag=GCA000160335_00961;product=Inositol monophosphatase;gene=suhB;Parent=GCA000160335_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_001240323.1,SO:0001217,UniParc:UPI0001D169B5,UniRef:UniRef100_A0A0E1X891,UniRef:UniRef50_A0A654A156,UniRef:UniRef90_A0A659IB49;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	1011820	1012011	.	-	.	ID=GCA000160335_00962_gene;locus_tag=GCA000160335_00962;gene=ylaF
contig_1	Pyrodigal	CDS	1011820	1012011	.	-	0	ID=GCA000160335_00962;Name=YlaF family protein;locus_tag=GCA000160335_00962;product=YlaF family protein;gene=ylaF;Parent=GCA000160335_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000810619.1,SO:0001217,UniParc:UPI00003B15A3,UniRef:UniRef100_A0A7Z7W1E3,UniRef:UniRef50_Q49WN3,UniRef:UniRef90_A0A2K4ALB3
contig_1	Pyrodigal	gene	1012113	1013960	.	+	.	ID=GCA000160335_00963_gene;locus_tag=GCA000160335_00963;gene=typA
contig_1	Pyrodigal	CDS	1012113	1013960	.	+	0	ID=GCA000160335_00963;Name=translational GTPase TypA;locus_tag=GCA000160335_00963;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA000160335_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_000182647.1,SO:0001217,UniParc:UPI00003B15A4,UniRef:UniRef100_A0AAJ5CT92,UniRef:UniRef50_A0A0R2DHU7,UniRef:UniRef90_A0A2A1K7F6
contig_1	Pyrodigal	gene	1014268	1014750	.	-	.	ID=GCA000160335_00964_gene;locus_tag=GCA000160335_00964
contig_1	Pyrodigal	CDS	1014268	1014750	.	-	0	ID=GCA000160335_00964;Name=Phage protein;locus_tag=GCA000160335_00964;product=Phage protein;Parent=GCA000160335_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000614712.1,SO:0001217,UniParc:UPI00000D7668,UniRef:UniRef100_Q2G1Y7,UniRef:UniRef50_B9DPZ4,UniRef:UniRef90_A0A7U7JTX4
contig_1	Pyrodigal	gene	1014891	1015166	.	+	.	ID=GCA000160335_00965_gene;locus_tag=GCA000160335_00965;gene=ylaN
contig_1	Pyrodigal	CDS	1014891	1015166	.	+	0	ID=GCA000160335_00965;Name=UPF0358 protein SaurJH1_1194;locus_tag=GCA000160335_00965;product=UPF0358 protein SaurJH1_1194;gene=ylaN;Parent=GCA000160335_00965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4838,COG:S,RefSeq:WP_001118970.1,SO:0001217,UniParc:UPI00003B15A5,UniRef:UniRef100_Q6GHX3,UniRef:UniRef50_Q2G2C3,UniRef:UniRef90_Q2G2C3
contig_1	Pyrodigal	gene	1015480	1016706	.	+	.	ID=GCA000160335_00966_gene;locus_tag=GCA000160335_00966;gene=ftsW
contig_1	Pyrodigal	CDS	1015480	1016706	.	+	0	ID=GCA000160335_00966;Name=cell division protein FtsW;locus_tag=GCA000160335_00966;product=cell division protein FtsW;gene=ftsW;Parent=GCA000160335_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000787940,COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_000787941.1,SO:0001217,UniParc:UPI0002D95B51,UniRef:UniRef100_UPI0002D95B51,UniRef:UniRef50_A0AAE8PBF8,UniRef:UniRef90_A0AAE8PBF8
contig_1	Pyrodigal	gene	1017259	1020711	.	+	.	ID=GCA000160335_00967_gene;locus_tag=GCA000160335_00967;gene=pycA
contig_1	Pyrodigal	CDS	1017259	1020711	.	+	0	ID=GCA000160335_00967;Name=pyruvate carboxylase;locus_tag=GCA000160335_00967;product=pyruvate carboxylase;Dbxref=GO:0004736,GO:0005524,GO:0005737,GO:0006090,GO:0006094,GO:0009374,GO:0042802,GO:0046872;gene=pycA;Parent=GCA000160335_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1038,KEGG:K01958,RefSeq:WP_000809522.1,SO:0001217,UniParc:UPI00003B15A6,UniRef:UniRef100_A0A7Z7QYJ8,UniRef:UniRef50_A0A0H3JRU9,UniRef:UniRef90_A0A0H3JRU9;ec_number=6.4.1.1
contig_1	Pyrodigal	gene	1020979	1021899	.	-	.	ID=GCA000160335_00968_gene;locus_tag=GCA000160335_00968;gene=ctaA
contig_1	Pyrodigal	CDS	1020979	1021899	.	-	0	ID=GCA000160335_00968;Name=Heme A synthase;locus_tag=GCA000160335_00968;product=Heme A synthase;Dbxref=GO:0005886,GO:0006784,GO:0016653,GO:0046872;gene=ctaA;Parent=GCA000160335_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1612,COG:H,KEGG:K02259,SO:0001217,UniParc:UPI00019CD5E5,UniRef:UniRef100_A0A7Z7QXY9,UniRef:UniRef50_Q2G2C0,UniRef:UniRef90_Q2G2C0;ec_number=1.17.99.9
contig_1	Pyrodigal	gene	1022341	1023252	.	+	.	ID=GCA000160335_00969_gene;locus_tag=GCA000160335_00969;gene=cyoE
contig_1	Pyrodigal	CDS	1022341	1023252	.	+	0	ID=GCA000160335_00969;Name=heme o synthase;locus_tag=GCA000160335_00969;product=heme o synthase;Dbxref=GO:0005886,GO:0006783,GO:0008495,GO:0016020,GO:0048034;gene=cyoE;Parent=GCA000160335_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0109,COG:HI,RefSeq:WP_000031403.1,SO:0001217,UniParc:UPI00000D9D7A,UniRef:UniRef100_Q6GHW9,UniRef:UniRef50_Q8CPM1,UniRef:UniRef90_Q2G2B9;ec_number=2.5.1.141
contig_1	Pyrodigal	gene	1023277	1023738	.	+	.	ID=GCA000160335_00970_gene;locus_tag=GCA000160335_00970;gene=ctaM
contig_1	Pyrodigal	CDS	1023277	1023738	.	+	0	ID=GCA000160335_00970;Name=DUF420 domain-containing protein;locus_tag=GCA000160335_00970;product=DUF420 domain-containing protein;gene=ctaM;Parent=GCA000160335_00970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2322,COG:O,KEGG:K08976,RefSeq:WP_000538761.1,SO:0001217,UniParc:UPI00003B15A7,UniRef:UniRef100_A0A0E1X883,UniRef:UniRef50_Q2FZG3,UniRef:UniRef90_Q2FZG3
contig_1	Pyrodigal	gene	1024065	1025102	.	+	.	ID=GCA000160335_00971_gene;locus_tag=GCA000160335_00971
contig_1	Pyrodigal	CDS	1024065	1025102	.	+	0	ID=GCA000160335_00971;Name=Cysteine-rich secretory family protein;locus_tag=GCA000160335_00971;product=Cysteine-rich secretory family protein;Parent=GCA000160335_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733421.1,SO:0001217,UniParc:UPI00003B15A8,UniRef:UniRef100_A0A7Z7QYA0,UniRef:UniRef50_Q5HQ49,UniRef:UniRef90_A0A0U1MJG5
contig_1	Pyrodigal	gene	1025118	1025552	.	+	.	ID=GCA000160335_00972_gene;locus_tag=GCA000160335_00972;gene=ylbF
contig_1	Pyrodigal	CDS	1025118	1025552	.	+	0	ID=GCA000160335_00972;Name=YlbF family regulator;locus_tag=GCA000160335_00972;product=YlbF family regulator;gene=ylbF;Parent=GCA000160335_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,RefSeq:WP_000606480.1,SO:0001217,UniParc:UPI0000054B34,UniRef:UniRef100_Q2FZG0,UniRef:UniRef50_Q2FZG0,UniRef:UniRef90_Q2FZG0
contig_1	Pyrodigal	gene	1025619	1026548	.	-	.	ID=GCA000160335_00973_gene;locus_tag=GCA000160335_00973;gene=ugpQ
contig_1	Pyrodigal	CDS	1025619	1026548	.	-	0	ID=GCA000160335_00973;Name=Glycerophosphodiester phosphodiesterase;locus_tag=GCA000160335_00973;product=Glycerophosphodiester phosphodiesterase;gene=ugpQ;Parent=GCA000160335_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000757583.1,SO:0001217,UniParc:UPI0001B70055,UniRef:UniRef100_UPI0001B70055,UniRef:UniRef50_A0A3A3AIN7,UniRef:UniRef90_A0A3A3AIN7;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1026787	1027041	.	+	.	ID=GCA000160335_00974_gene;locus_tag=GCA000160335_00974;gene=ylbG
contig_1	Pyrodigal	CDS	1026787	1027041	.	+	0	ID=GCA000160335_00974;Name=UPF0298 protein SACOL1131;locus_tag=GCA000160335_00974;product=UPF0298 protein SACOL1131;Dbxref=GO:0005737;gene=ylbG;Parent=GCA000160335_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4471,COG:S,RefSeq:WP_001049150.1,SO:0001217,UniParc:UPI0000054B32,UniRef:UniRef100_Q2FZF8,UniRef:UniRef50_Q2FZF8,UniRef:UniRef90_Q2FZF8
contig_1	Pyrodigal	gene	1027044	1027433	.	-	.	ID=GCA000160335_00975_gene;locus_tag=GCA000160335_00975
contig_1	Pyrodigal	CDS	1027044	1027433	.	-	0	ID=GCA000160335_00975;Name=Methylthioribose kinase;locus_tag=GCA000160335_00975;product=Methylthioribose kinase;Parent=GCA000160335_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000814565.1,SO:0001217,UniParc:UPI0000054B31,UniRef:UniRef100_Q2FZF7,UniRef:UniRef50_B9DPZ2,UniRef:UniRef90_A0A2K4AL88
contig_1	Pyrodigal	gene	1027503	1028045	.	+	.	ID=GCA000160335_00976_gene;locus_tag=GCA000160335_00976;gene=rsmD
contig_1	Pyrodigal	CDS	1027503	1028045	.	+	0	ID=GCA000160335_00976;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA000160335_00976;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0031167,GO:0052913;gene=rsmD;Parent=GCA000160335_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,RefSeq:WP_001263796.1,SO:0001217,UniParc:UPI00000D7739,UniRef:UniRef100_Q2FZF6,UniRef:UniRef50_A0A9N8IIV2,UniRef:UniRef90_A0A9N8IIV2;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	1028047	1028529	.	+	.	ID=GCA000160335_00977_gene;locus_tag=GCA000160335_00977;gene=coaD
contig_1	Pyrodigal	CDS	1028047	1028529	.	+	0	ID=GCA000160335_00977;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000160335_00977;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000160335_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_000401377.1,SO:0001217,UniParc:UPI0000054B2E,UniRef:UniRef100_Q2FZF5,UniRef:UniRef50_Q2FZF5,UniRef:UniRef90_Q2FZF5;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	1028591	1029730	.	-	.	ID=GCA000160335_00978_gene;locus_tag=GCA000160335_00978;gene=tmcAL
contig_1	Pyrodigal	CDS	1028591	1029730	.	-	0	ID=GCA000160335_00978;Name=nucleotidyltransferase;locus_tag=GCA000160335_00978;product=nucleotidyltransferase;Dbxref=GO:0000049,GO:0005524,GO:0005737,GO:0006400,GO:0016879;gene=tmcAL;Parent=GCA000160335_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1323,COG:J,KEGG:K27343,RefSeq:WP_000843621.1,SO:0001217,UniParc:UPI00003B15AB,UniRef:UniRef100_Q6GHW0,UniRef:UniRef50_Q2FZF4,UniRef:UniRef90_Q2FZF4;ec_number=6.3.4.-
contig_1	Pyrodigal	gene	1029857	1030414	.	+	.	ID=GCA000160335_00979_gene;locus_tag=GCA000160335_00979;gene=yceD
contig_1	Pyrodigal	CDS	1029857	1030414	.	+	0	ID=GCA000160335_00979;Name=DUF177 domain-containing protein;locus_tag=GCA000160335_00979;product=DUF177 domain-containing protein;gene=yceD;Parent=GCA000160335_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_000872158.1,SO:0001217,UniParc:UPI00000D7803,UniRef:UniRef100_Q2FZF3,UniRef:UniRef50_Q2FZF3,UniRef:UniRef90_Q2FZF3
contig_1	Pyrodigal	gene	1030494	1030667	.	+	.	ID=GCA000160335_00980_gene;locus_tag=GCA000160335_00980;gene=rpmF
contig_1	Pyrodigal	CDS	1030494	1030667	.	+	0	ID=GCA000160335_00980;Name=50S ribosomal protein L32;locus_tag=GCA000160335_00980;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000160335_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_000290472.1,SO:0001217,UniParc:UPI0000133F6C,UniRef:UniRef100_Q2FHV3,UniRef:UniRef50_B7JC05,UniRef:UniRef90_Q5HQ39
contig_1	Pyrodigal	gene	1030821	1032767	.	-	.	ID=GCA000160335_00981_gene;locus_tag=GCA000160335_00981;gene=isdB
contig_1	Pyrodigal	CDS	1030821	1032767	.	-	0	ID=GCA000160335_00981;Name=heme uptake protein IsdB;locus_tag=GCA000160335_00981;product=heme uptake protein IsdB;Dbxref=GO:0005576,GO:0015232,GO:0015886,GO:0020037,GO:0046872;gene=isdB;Parent=GCA000160335_00981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_001041576.1,SO:0001217,UniParc:UPI00019F4D3A,UniRef:UniRef100_A0A2W3JPS3,UniRef:UniRef50_Q2FZF0,UniRef:UniRef90_Q2FZF0
contig_1	Pyrodigal	gene	1032969	1034033	.	-	.	ID=GCA000160335_00982_gene;locus_tag=GCA000160335_00982;gene=isdA
contig_1	Pyrodigal	CDS	1032969	1034033	.	-	0	ID=GCA000160335_00982;Name=Iron-regulated surface determinant protein A;locus_tag=GCA000160335_00982;product=Iron-regulated surface determinant protein A;Dbxref=GO:0005576,GO:0046872;gene=isdA;Parent=GCA000160335_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000160848.1,SO:0001217,UniParc:UPI00000AED64,UniRef:UniRef100_Q6GHV6,UniRef:UniRef50_Q2FZE9,UniRef:UniRef90_Q2FZE9
contig_1	Pyrodigal	gene	1034242	1034925	.	+	.	ID=GCA000160335_00983_gene;locus_tag=GCA000160335_00983;gene=isdC
contig_1	Pyrodigal	CDS	1034242	1034925	.	+	0	ID=GCA000160335_00983;Name=iron-regulated surface determinant protein C;locus_tag=GCA000160335_00983;product=iron-regulated surface determinant protein C;Dbxref=GO:0005576,GO:0009274,GO:0015886,GO:0030492,GO:0046872;gene=isdC;Parent=GCA000160335_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000789812.1,SO:0001217,UniParc:UPI00000BD674,UniRef:UniRef100_Q6GHV5,UniRef:UniRef50_Q8KQR1,UniRef:UniRef90_Q8KQR1,VFDB:VFC0272,VFDB:VFG001319
contig_1	Pyrodigal	gene	1034925	1036001	.	+	.	ID=GCA000160335_00984_gene;locus_tag=GCA000160335_00984;gene=isdD
contig_1	Pyrodigal	CDS	1034925	1036001	.	+	0	ID=GCA000160335_00984;Name=iron-regulated surface determinant protein D;locus_tag=GCA000160335_00984;product=iron-regulated surface determinant protein D;gene=isdD;Parent=GCA000160335_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K25116,RefSeq:WP_001246693.1,SO:0001217,UniParc:UPI00000B2B62,UniRef:UniRef100_A0A7Z7QY22,UniRef:UniRef50_Q2FZE7,UniRef:UniRef90_Q2FZE7,VFDB:VFC0272,VFDB:VFG044266
contig_1	Pyrodigal	gene	1035998	1036876	.	+	.	ID=GCA000160335_00985_gene;locus_tag=GCA000160335_00985;gene=isdE
contig_1	Pyrodigal	CDS	1035998	1036876	.	+	0	ID=GCA000160335_00985;Name=iron-regulated surface determinant protein E;locus_tag=GCA000160335_00985;product=iron-regulated surface determinant protein E;Dbxref=GO:0005886,GO:0015886,GO:0016020,GO:0020037,GO:0046872,GO:0071281;gene=isdE;Parent=GCA000160335_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_001220199.1,SO:0001217,UniParc:UPI00000D7746,UniRef:UniRef100_Q2FZE6,UniRef:UniRef50_Q2FZE6,UniRef:UniRef90_Q2FZE6,VFDB:VFC0272,VFDB:VFG001321
contig_1	Pyrodigal	gene	1036886	1037854	.	+	.	ID=GCA000160335_00986_gene;locus_tag=GCA000160335_00986;gene=isdF
contig_1	Pyrodigal	CDS	1036886	1037854	.	+	0	ID=GCA000160335_00986;Name=iron-regulated surface determinant protein F%2C ATP-binding-cassette-type transmembrane transporter;locus_tag=GCA000160335_00986;product=iron-regulated surface determinant protein F%2C ATP-binding-cassette-type transmembrane transporter;Dbxref=GO:0005886,GO:0022857,GO:0033214;gene=isdF;Parent=GCA000160335_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniParc:UPI00000BE5B6,UniRef:UniRef100_Q2FHU7,UniRef:UniRef50_Q2FZE5,UniRef:UniRef90_Q2FZE5,VFDB:VFC0272,VFDB:VFG044268
contig_1	Pyrodigal	gene	1037916	1038650	.	+	.	ID=GCA000160335_00987_gene;locus_tag=GCA000160335_00987;gene=srtB
contig_1	Pyrodigal	CDS	1037916	1038650	.	+	0	ID=GCA000160335_00987;Name=NPQTN specific sortase B;locus_tag=GCA000160335_00987;product=NPQTN specific sortase B;Dbxref=GO:0004197,GO:0005886,GO:0016485,GO:0016787,GO:0045184;gene=srtB;Parent=GCA000160335_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4509,COG:S,KEGG:K08600,RefSeq:WP_001242415.1,SO:0001217,UniParc:UPI0001B70056,UniRef:UniRef100_UPI0001B70056,UniRef:UniRef50_Q2FZE3,UniRef:UniRef90_Q2FZE3,VFDB:VFC0272,VFDB:VFG044269;ec_number=3.4.22.71
contig_1	Pyrodigal	gene	1038669	1038992	.	+	.	ID=GCA000160335_00988_gene;locus_tag=GCA000160335_00988;gene=isdG
contig_1	Pyrodigal	CDS	1038669	1038992	.	+	0	ID=GCA000160335_00988;Name=staphylobilin-forming heme oxygenase IsdG;locus_tag=GCA000160335_00988;product=staphylobilin-forming heme oxygenase IsdG;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdG;Parent=GCA000160335_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000670950,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000670950.1,SO:0001217,UniParc:UPI0000054403,UniRef:UniRef100_Q2FZE2,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2FZE2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	1039376	1040116	.	+	.	ID=GCA000160335_00989_gene;locus_tag=GCA000160335_00989;gene=spoU
contig_1	Pyrodigal	CDS	1039376	1040116	.	+	0	ID=GCA000160335_00989;Name=RNA methyltransferase;locus_tag=GCA000160335_00989;product=RNA methyltransferase;gene=spoU;Parent=GCA000160335_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000435380.1,SO:0001217,UniParc:UPI00003B15AE,UniRef:UniRef100_A0A098H324,UniRef:UniRef50_A0A098H324,UniRef:UniRef90_A0A098H324
contig_1	Pyrodigal	gene	1040497	1041555	.	+	.	ID=GCA000160335_00990_gene;locus_tag=GCA000160335_00990;gene=pheS
contig_1	Pyrodigal	CDS	1040497	1041555	.	+	0	ID=GCA000160335_00990;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000160335_00990;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432,GO:0016740;gene=pheS;Parent=GCA000160335_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0016,COG:J,KEGG:K01889,RefSeq:WP_000003566.1,SO:0001217,UniParc:UPI0000030AD8,UniRef:UniRef100_P68847,UniRef:UniRef50_Q4L5E3,UniRef:UniRef90_Q4L5E3;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1041555	1043957	.	+	.	ID=GCA000160335_00991_gene;locus_tag=GCA000160335_00991;gene=pheT
contig_1	Pyrodigal	CDS	1041555	1043957	.	+	0	ID=GCA000160335_00991;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000160335_00991;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0006432,GO:0009328,GO:0016740;gene=pheT;Parent=GCA000160335_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_000908974.1,SO:0001217,UniParc:UPI00003B15AF,UniRef:UniRef100_Q6GHU6,UniRef:UniRef50_Q4L5E4,UniRef:UniRef90_Q2FHU2;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1044259	1045248	.	-	.	ID=GCA000160335_00992_gene;locus_tag=GCA000160335_00992;gene=rnhC
contig_1	Pyrodigal	CDS	1044259	1045248	.	-	0	ID=GCA000160335_00992;Name=ribonuclease HIII;locus_tag=GCA000160335_00992;product=ribonuclease HIII;Dbxref=GO:0000287,GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0006401,GO:0032299,GO:0043137;gene=rnhC;Parent=GCA000160335_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1039,COG:L,KEGG:K03471,SO:0001217,UniParc:UPI00019CD5B3,UniRef:UniRef100_Q6GHU5,UniRef:UniRef50_Q2FZD7,UniRef:UniRef90_Q2FZD7;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1045573	1045839	.	+	.	ID=GCA000160335_00993_gene;locus_tag=GCA000160335_00993;gene=zapA
contig_1	Pyrodigal	CDS	1045573	1045839	.	+	0	ID=GCA000160335_00993;Name=cell division protein ZapA;locus_tag=GCA000160335_00993;product=cell division protein ZapA;Dbxref=GO:0051301;gene=zapA;Parent=GCA000160335_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000046704.1,SO:0001217,UniParc:UPI00000D7660,UniRef:UniRef100_A0A7Z7W1A1,UniRef:UniRef50_A0A085UFE6,UniRef:UniRef90_A0A0D3Q6G5
contig_1	Pyrodigal	gene	1045840	1046361	.	+	.	ID=GCA000160335_00994_gene;locus_tag=GCA000160335_00994;gene=cvpA
contig_1	Pyrodigal	CDS	1045840	1046361	.	+	0	ID=GCA000160335_00994;Name=CvpA family protein;locus_tag=GCA000160335_00994;product=CvpA family protein;gene=cvpA;Parent=GCA000160335_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_000582582.1,SO:0001217,UniParc:UPI00003B15B1,UniRef:UniRef100_A0A7Z7W2H2,UniRef:UniRef50_Q2FZD5,UniRef:UniRef90_Q2FZD5
contig_1	Pyrodigal	gene	1046434	1048146	.	+	.	ID=GCA000160335_00995_gene;locus_tag=GCA000160335_00995;gene=polX
contig_1	Pyrodigal	CDS	1046434	1048146	.	+	0	ID=GCA000160335_00995;Name=DNA polymerase/3'-5' exonuclease PolX;locus_tag=GCA000160335_00995;product=DNA polymerase/3'-5' exonuclease PolX;Dbxref=GO:0003677,GO:0003887,GO:0006281;gene=polX;Parent=GCA000160335_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1796,COG:L,RefSeq:WP_000161937.1,SO:0001217,UniParc:UPI00019CD581,UniRef:UniRef100_A0A0E1X863,UniRef:UniRef50_A0A0U1MIQ0,UniRef:UniRef90_A0A0U1MIQ0
contig_1	Pyrodigal	gene	1048156	1050504	.	+	.	ID=GCA000160335_00996_gene;locus_tag=GCA000160335_00996;gene=mutS2
contig_1	Pyrodigal	CDS	1048156	1050504	.	+	0	ID=GCA000160335_00996;Name=endonuclease MutS2;locus_tag=GCA000160335_00996;product=endonuclease MutS2;Dbxref=GO:0004519,GO:0005524,GO:0006259,GO:0006298,GO:0016887,GO:0019843,GO:0030983,GO:0045910,GO:0140664;gene=mutS2;Parent=GCA000160335_00996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1193,COG:J,KEGG:K07456,SO:0001217,UniRef:UniRef50_Q2FZD3,UniRef:UniRef90_Q2FZD3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1050677	1050991	.	+	.	ID=GCA000160335_00997_gene;locus_tag=GCA000160335_00997;gene=trxA
contig_1	Pyrodigal	CDS	1050677	1050991	.	+	0	ID=GCA000160335_00997;Name=thioredoxin;locus_tag=GCA000160335_00997;product=thioredoxin;Dbxref=GO:0005829,GO:0015035,GO:0045454;gene=trxA;Parent=GCA000160335_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_001018928.1,SO:0001217,UniParc:UPI00000D78B6,UniRef:UniRef100_Q2FZD2,UniRef:UniRef50_P14949,UniRef:UniRef90_Q2FZD2
contig_1	Pyrodigal	gene	1051315	1053096	.	+	.	ID=GCA000160335_00998_gene;locus_tag=GCA000160335_00998;gene=uvrC
contig_1	Pyrodigal	CDS	1051315	1053096	.	+	0	ID=GCA000160335_00998;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000160335_00998;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432;gene=uvrC;Parent=GCA000160335_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_000390514.1,SO:0001217,UniParc:UPI0000137EEF,UniRef:UniRef100_Q6GHT9,UniRef:UniRef50_Q8DQQ9,UniRef:UniRef90_Q2FZD0
contig_1	Pyrodigal	gene	1053420	1054034	.	+	.	ID=GCA000160335_00999_gene;locus_tag=GCA000160335_00999;gene=sdhC
contig_1	Pyrodigal	CDS	1053420	1054034	.	+	0	ID=GCA000160335_00999;Name=succinate dehydrogenase%2C cytochrome b556 subunit;locus_tag=GCA000160335_00999;product=succinate dehydrogenase%2C cytochrome b556 subunit;Dbxref=GO:0000104,GO:0006099,GO:0009055,GO:0045273;gene=sdhC;Parent=GCA000160335_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2009,RefSeq:WP_000079317.1,SO:0001217,UniParc:UPI00000D786C,UniRef:UniRef100_Q2FZC9,UniRef:UniRef50_P08064,UniRef:UniRef90_A0A7U7JU09
contig_1	Pyrodigal	gene	1054086	1055852	.	+	.	ID=GCA000160335_01000_gene;locus_tag=GCA000160335_01000;gene=sdhA
contig_1	Pyrodigal	CDS	1054086	1055852	.	+	0	ID=GCA000160335_01000;Name=succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000160335_01000;product=succinate dehydrogenase flavoprotein subunit;gene=sdhA;Parent=GCA000160335_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,RefSeq:WP_000818278.1,SO:0001217,UniParc:UPI00000543F4,UniRef:UniRef100_Q2FZC8,UniRef:UniRef50_P08065,UniRef:UniRef90_A0AAE8PAN5
contig_1	Pyrodigal	gene	1055852	1056085	.	+	.	ID=GCA000160335_01001_gene;locus_tag=GCA000160335_01001
contig_1	Pyrodigal	CDS	1055852	1056085	.	+	0	ID=GCA000160335_01001;Name=hypothetical protein;locus_tag=GCA000160335_01001;product=hypothetical protein;Parent=GCA000160335_01001_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1056118	1056666	.	+	.	ID=GCA000160335_01002_gene;locus_tag=GCA000160335_01002;gene=sdhB
contig_1	Pyrodigal	CDS	1056118	1056666	.	+	0	ID=GCA000160335_01002;Name=succinate dehydrogenase iron-sulfur subunit;locus_tag=GCA000160335_01002;product=succinate dehydrogenase iron-sulfur subunit;Dbxref=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gene=sdhB;Parent=GCA000160335_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A154BRT2,UniRef:UniRef90_A0A380FEI3
contig_1	Pyrodigal	gene	1056905	1057705	.	+	.	ID=GCA000160335_01003_gene;locus_tag=GCA000160335_01003;gene=racE
contig_1	Pyrodigal	CDS	1056905	1057705	.	+	0	ID=GCA000160335_01003;Name=glutamate racemase;locus_tag=GCA000160335_01003;product=glutamate racemase;Dbxref=GO:0008152,GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=racE;Parent=GCA000160335_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_001039660.1,SO:0001217,UniParc:UPI00003B15B5,UniRef:UniRef100_Q6GHT5,UniRef:UniRef50_Q6GHT5,UniRef:UniRef90_Q6GHT5;ec_number=5.1.1.3
contig_1	Pyrodigal	gene	1057717	1058304	.	+	.	ID=GCA000160335_01004_gene;locus_tag=GCA000160335_01004;gene=rdgB
contig_1	Pyrodigal	CDS	1057717	1058304	.	+	0	ID=GCA000160335_01004;Name=XTP/dITP diphosphatase;locus_tag=GCA000160335_01004;product=XTP/dITP diphosphatase;Dbxref=GO:0000166,GO:0005829,GO:0009117,GO:0009143,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872,GO:0047429;gene=rdgB;Parent=GCA000160335_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,KEGG:K01519,RefSeq:WP_000659309.1,SO:0001217,UniParc:UPI00003B15B6,UniRef:UniRef100_Q6GHT4,UniRef:UniRef50_Q8CSY5,UniRef:UniRef90_P64309;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	1058297	1058800	.	+	.	ID=GCA000160335_01005_gene;locus_tag=GCA000160335_01005
contig_1	Pyrodigal	CDS	1058297	1058800	.	+	0	ID=GCA000160335_01005;Name=Phosphoesterase;locus_tag=GCA000160335_01005;product=Phosphoesterase;Parent=GCA000160335_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07095,RefSeq:WP_000049496.1,SO:0001217,UniParc:UPI00019F4D08,UniRef:UniRef100_A0A7Z7W1C6,UniRef:UniRef50_Q2FZC4,UniRef:UniRef90_A0AAP7YV19
contig_1	Pyrodigal	gene	1059291	1059608	.	+	.	ID=GCA000160335_01006_gene;locus_tag=GCA000160335_01006
contig_1	Pyrodigal	CDS	1059291	1059608	.	+	0	ID=GCA000160335_01006;Name=Fibrinogen-binding protein;locus_tag=GCA000160335_01006;product=Fibrinogen-binding protein;Parent=GCA000160335_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000739205.1,SO:0001217,UniParc:UPI00003B15B9,UniRef:UniRef100_A0A7Z7W1F7,UniRef:UniRef50_A0A3M8VBL4,UniRef:UniRef90_A0A3M8VBL4
contig_1	Pyrodigal	gene	1060049	1060342	.	-	.	ID=GCA000160335_01007_gene;locus_tag=GCA000160335_01007
contig_1	Pyrodigal	CDS	1060049	1060342	.	-	0	ID=GCA000160335_01007;Name=FPRL1 family inhibitory protein;locus_tag=GCA000160335_01007;product=FPRL1 family inhibitory protein;Parent=GCA000160335_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14203,SO:0001217,UniRef:UniRef50_A6QG57,UniRef:UniRef90_A0A7Z7W1N4
contig_1	Pyrodigal	gene	1061014	1061520	.	+	.	ID=GCA000160335_01008_gene;locus_tag=GCA000160335_01008
contig_1	Pyrodigal	CDS	1061014	1061520	.	+	0	ID=GCA000160335_01008;Name=Membrane protein;locus_tag=GCA000160335_01008;product=Membrane protein;Parent=GCA000160335_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000584395.1,SO:0001217,UniParc:UPI00003B15BA,UniRef:UniRef100_A0A7Z7W1A5,UniRef:UniRef50_Q2FZB9,UniRef:UniRef90_Q2FZB9
contig_1	Pyrodigal	gene	1061777	1062274	.	+	.	ID=GCA000160335_01009_gene;locus_tag=GCA000160335_01009;gene=efb
contig_1	Pyrodigal	CDS	1061777	1062274	.	+	0	ID=GCA000160335_01009;Name=complement convertase inhibitor Efb;locus_tag=GCA000160335_01009;product=complement convertase inhibitor Efb;Dbxref=GO:0001848,GO:0005615;gene=efb;Parent=GCA000160335_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000791587,KEGG:K14200,RefSeq:WP_000791575.1,SO:0001217,UniParc:UPI00003B15BB,UniRef:UniRef100_Q6GHS9,UniRef:UniRef50_P68799,UniRef:UniRef90_Q6GHS9
contig_1	Pyrodigal	gene	1062426	1062776	.	+	.	ID=GCA000160335_01010_gene;locus_tag=GCA000160335_01010;gene=scc
contig_1	Pyrodigal	CDS	1062426	1062776	.	+	0	ID=GCA000160335_01010;Name=complement inhibitor SCIN-C;locus_tag=GCA000160335_01010;product=complement inhibitor SCIN-C;gene=scc;Parent=GCA000160335_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000669541,KEGG:K14199,RefSeq:WP_000669541.1,SO:0001217,UniParc:UPI00003B15BC,UniRef:UniRef100_A0A7Z7QY52,UniRef:UniRef50_A0A0U1MK84,UniRef:UniRef90_A0A7Z7QY52
contig_1	Pyrodigal	gene	1063025	1063210	.	-	.	ID=GCA000160335_01011_gene;locus_tag=GCA000160335_01011
contig_1	Pyrodigal	CDS	1063025	1063210	.	-	0	ID=GCA000160335_01011;Name=DUF4044 domain-containing protein;locus_tag=GCA000160335_01011;product=DUF4044 domain-containing protein;Parent=GCA000160335_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001032820.1,SO:0001217,UniParc:UPI00003B15BE,UniRef:UniRef100_A0A7Z7QYM7,UniRef:UniRef50_Q2G1X3,UniRef:UniRef90_A0A7Z7QYM7
contig_1	Pyrodigal	gene	1063820	1064053	.	-	.	ID=GCA000160335_01012_gene;locus_tag=GCA000160335_01012
contig_1	Pyrodigal	CDS	1063820	1064053	.	-	0	ID=GCA000160335_01012;Name=Phage protein;locus_tag=GCA000160335_01012;product=Phage protein;Parent=GCA000160335_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000231331.1,SO:0001217,UniParc:UPI00003B15C0,UniRef:UniRef100_A0A2X2M9T6,UniRef:UniRef50_Q2G1X1,UniRef:UniRef90_A0A0U1MIP2
contig_1	Pyrodigal	gene	1064507	1065466	.	-	.	ID=GCA000160335_01013_gene;locus_tag=GCA000160335_01013;gene=hly
contig_1	Pyrodigal	CDS	1064507	1065466	.	-	0	ID=GCA000160335_01013;Name=Alpha-Hemolysin precursor;locus_tag=GCA000160335_01013;product=Alpha-Hemolysin precursor;Dbxref=GO:0005576,GO:0042802,GO:0051715,GO:0090729;gene=hly;Parent=GCA000160335_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11032,RefSeq:WP_000857479.1,SO:0001217,UniParc:UPI0001B70078,UniRef:UniRef100_A0A7Z7QY41,UniRef:UniRef50_P09616,UniRef:UniRef90_P09616,VFDB:VFC0235,VFDB:VFG001293
contig_1	Pyrodigal	gene	1066264	1066464	.	+	.	ID=GCA000160335_01014_gene;locus_tag=GCA000160335_01014
contig_1	Pyrodigal	CDS	1066264	1066464	.	+	0	ID=GCA000160335_01014;Name=DNA-binding protein;locus_tag=GCA000160335_01014;product=DNA-binding protein;Parent=GCA000160335_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B15C2,UniRef:UniRef100_A0A7Z7QYC7,UniRef:UniRef50_Q2FZB4,UniRef:UniRef90_A0A0U1MK90
contig_1	Infernal	gene	1066551	1066776	.	-	.	ID=GCA000160335_01015_gene;locus_tag=GCA000160335_01015;gene=tsr24
contig_1	Infernal	ncRNA	1066551	1066776	1.1e-28	-	.	ID=GCA000160335_01015;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_01015;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_01015_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1066766	1068367	.	+	.	ID=GCA000160335_01016_gene;locus_tag=GCA000160335_01016;gene=tnp
contig_1	Pyrodigal	CDS	1066766	1068367	.	+	0	ID=GCA000160335_01016;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_01016;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,SO:0001217,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	1068413	1068675	.	-	.	ID=GCA000160335_01017_gene;locus_tag=GCA000160335_01017;gene=S35
contig_1	Infernal	ncRNA	1068413	1068675	9.1e-17	-	.	ID=GCA000160335_01017;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01017;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01017_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1068783	1069499	.	-	.	ID=GCA000160335_01018_gene;locus_tag=GCA000160335_01018
contig_1	Pyrodigal	CDS	1068783	1069499	.	-	0	ID=GCA000160335_01018;Name=superantigen-like protein SSL12;locus_tag=GCA000160335_01018;product=superantigen-like protein SSL12;Parent=GCA000160335_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224174.1,SO:0001217,UniParc:UPI00003B15C4,UniRef:UniRef100_A0A0E1X847,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A0E1X847
contig_1	Pyrodigal	gene	1069608	1070333	.	-	.	ID=GCA000160335_01019_gene;locus_tag=GCA000160335_01019
contig_1	Pyrodigal	CDS	1069608	1070333	.	-	0	ID=GCA000160335_01019;Name=superantigen-like protein SSL13;locus_tag=GCA000160335_01019;product=superantigen-like protein SSL13;Parent=GCA000160335_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000794663.1,SO:0001217,UniParc:UPI00003B15C5,UniRef:UniRef100_A0A0E1X6J7,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A5S9C3W2
contig_1	Pyrodigal	gene	1070443	1071168	.	-	.	ID=GCA000160335_01020_gene;locus_tag=GCA000160335_01020
contig_1	Pyrodigal	CDS	1070443	1071168	.	-	0	ID=GCA000160335_01020;Name=superantigen-like protein SSL14;locus_tag=GCA000160335_01020;product=superantigen-like protein SSL14;Parent=GCA000160335_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000739586.1,SO:0001217,UniParc:UPI0001B70079,UniRef:UniRef100_A0A0E1XGV4,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A5S9C3X8
contig_1	Pyrodigal	gene	1071598	1072599	.	+	.	ID=GCA000160335_01021_gene;locus_tag=GCA000160335_01021;gene=argF
contig_1	Pyrodigal	CDS	1071598	1072599	.	+	0	ID=GCA000160335_01021;Name=ornithine carbamoyltransferase;locus_tag=GCA000160335_01021;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000160335_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000793614.1,SO:0001217,UniParc:UPI0001B7007A,UniRef:UniRef100_UPI0001B7007A,UniRef:UniRef50_P08308,UniRef:UniRef90_P0C0N0;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	1072619	1073554	.	+	.	ID=GCA000160335_01022_gene;locus_tag=GCA000160335_01022;gene=arcC
contig_1	Pyrodigal	CDS	1072619	1073554	.	+	0	ID=GCA000160335_01022;Name=carbamate kinase;locus_tag=GCA000160335_01022;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000160335_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,SO:0001217,UniParc:UPI00019CD540,UniRef:UniRef100_Q6GHR6,UniRef:UniRef50_Q2FZA9,UniRef:UniRef90_Q2FZA9;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	1073725	1075281	.	+	.	ID=GCA000160335_01023_gene;locus_tag=GCA000160335_01023;gene=yfcC
contig_1	Pyrodigal	CDS	1073725	1075281	.	+	0	ID=GCA000160335_01023;Name=ArcD-like protein;locus_tag=GCA000160335_01023;product=ArcD-like protein;gene=yfcC;Parent=GCA000160335_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,RefSeq:WP_000432070.1,SO:0001217,UniParc:UPI00003B15C8,UniRef:UniRef100_A0A7Z7W1P1,UniRef:UniRef50_P44023,UniRef:UniRef90_H9BJB2
contig_1	Pyrodigal	gene	1075588	1075815	.	+	.	ID=GCA000160335_01024_gene;locus_tag=GCA000160335_01024;gene=elxI1
contig_1	Pyrodigal	CDS	1075588	1075815	.	+	0	ID=GCA000160335_01024;Name=epilancin biosynthesis-related protein ElxI1;locus_tag=GCA000160335_01024;product=epilancin biosynthesis-related protein ElxI1;gene=elxI1;Parent=GCA000160335_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000149426.1,SO:0001217,UniParc:UPI00003B15C9,UniRef:UniRef100_A0A7Z7W1B1,UniRef:UniRef50_I6ZHL4,UniRef:UniRef90_Q2FZA7
contig_1	Pyrodigal	gene	1076131	1077078	.	-	.	ID=GCA000160335_01025_gene;locus_tag=GCA000160335_01025;gene=tehA
contig_1	Pyrodigal	CDS	1076131	1077078	.	-	0	ID=GCA000160335_01025;Name=Permease;locus_tag=GCA000160335_01025;product=Permease;gene=tehA;Parent=GCA000160335_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1275,COG:V,KEGG:K11041,RefSeq:WP_001239277.1,SO:0001217,UniParc:UPI00003B15CA,UniRef:UniRef100_A0AAJ5CU46,UniRef:UniRef50_Q2FZA6,UniRef:UniRef90_Q2FZA6
contig_1	Pyrodigal	gene	1077325	1077522	.	+	.	ID=GCA000160335_01026_gene;locus_tag=GCA000160335_01026
contig_1	Pyrodigal	CDS	1077325	1077522	.	+	0	ID=GCA000160335_01026;Name=DNA-binding protein;locus_tag=GCA000160335_01026;product=DNA-binding protein;Parent=GCA000160335_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001245800.1,SO:0001217,UniParc:UPI00003B15CB,UniRef:UniRef100_A0A7Z7QY59,UniRef:UniRef50_Q2FZA5,UniRef:UniRef90_A0A380DYZ2
contig_1	tRNAscan-SE	gene	1077984	1078057	.	-	.	ID=GCA000160335_01027_gene;locus_tag=GCA000160335_01027;gene=trnR
contig_1	tRNAscan-SE	tRNA	1077984	1078057	.	-	.	ID=GCA000160335_01027;Name=tRNA-Arg(tct);locus_tag=GCA000160335_01027;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000160335_01027_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	1078421	1078555	.	+	.	ID=GCA000160335_01028_gene;locus_tag=GCA000160335_01028
contig_1	Pyrodigal	CDS	1078421	1078555	.	+	0	ID=GCA000160335_01028;Name=Beta-class phenol-soluble modulin;locus_tag=GCA000160335_01028;product=Beta-class phenol-soluble modulin;Parent=GCA000160335_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20337,RefSeq:WP_000398672.1,SO:0001217,UniParc:UPI00000D9D8F,UniRef:UniRef100_Q2FZA4,UniRef:UniRef50_P11697,UniRef:UniRef90_Q2FZA4
contig_1	Pyrodigal	gene	1078688	1079374	.	+	.	ID=GCA000160335_01029_gene;locus_tag=GCA000160335_01029;gene=yigB
contig_1	Pyrodigal	CDS	1078688	1079374	.	+	0	ID=GCA000160335_01029;Name=YjjG family noncanonical pyrimidine nucleotidase;locus_tag=GCA000160335_01029;product=YjjG family noncanonical pyrimidine nucleotidase;Dbxref=GO:0008253;gene=yigB;Parent=GCA000160335_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,SO:0001217,UniRef:UniRef50_Q2FZA2,UniRef:UniRef90_Q2FZA2;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	1079482	1079922	.	-	.	ID=GCA000160335_01030_gene;locus_tag=GCA000160335_01030
contig_1	Pyrodigal	CDS	1079482	1079922	.	-	0	ID=GCA000160335_01030;Name=N-acetyltransferase;locus_tag=GCA000160335_01030;product=N-acetyltransferase;Dbxref=GO:0008080,GO:0016747;Parent=GCA000160335_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001289711.1,SO:0001217,UniParc:UPI00000543D3,UniRef:UniRef100_Q99UT4,UniRef:UniRef50_Q8CSY0,UniRef:UniRef90_Q99UT4;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1080117	1081730	.	+	.	ID=GCA000160335_01031_gene;locus_tag=GCA000160335_01031;gene=bshC
contig_1	Pyrodigal	CDS	1080117	1081730	.	+	0	ID=GCA000160335_01031;Name=bacillithiol biosynthesis cysteine-adding enzyme BshC;locus_tag=GCA000160335_01031;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;Dbxref=GO:0003824,GO:0016874,GO:0071793;gene=bshC;Parent=GCA000160335_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4365,COG:Q,KEGG:K22136,RefSeq:WP_000340456.1,SO:0001217,UniParc:UPI00003B15CD,UniRef:UniRef100_Q6GHQ8,UniRef:UniRef50_Q2FZ98,UniRef:UniRef90_Q2FZ98;ec_number=6.-.-.-
contig_1	Pyrodigal	gene	1081874	1082305	.	+	.	ID=GCA000160335_01032_gene;locus_tag=GCA000160335_01032;gene=mraZ
contig_1	Pyrodigal	CDS	1081874	1082305	.	+	0	ID=GCA000160335_01032;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000160335_01032;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000160335_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_000480800.1,SO:0001217,UniParc:UPI00000543CE,UniRef:UniRef100_Q2FZ97,UniRef:UniRef50_Q8Y5L6,UniRef:UniRef90_Q2FZ97
contig_1	Pyrodigal	gene	1082321	1083256	.	+	.	ID=GCA000160335_01033_gene;locus_tag=GCA000160335_01033;gene=rsmH
contig_1	Pyrodigal	CDS	1082321	1083256	.	+	0	ID=GCA000160335_01033;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000160335_01033;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000160335_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,KEGG:K03438,RefSeq:WP_000468384.1,SO:0001217,UniParc:UPI000012F4FC,UniRef:UniRef100_P60393,UniRef:UniRef50_Q07876,UniRef:UniRef90_P60393;ec_number=2.1.1.199
contig_1	Pyrodigal	gene	1083270	1083671	.	+	.	ID=GCA000160335_01034_gene;locus_tag=GCA000160335_01034;gene=ftsL
contig_1	Pyrodigal	CDS	1083270	1083671	.	+	0	ID=GCA000160335_01034;Name=cell division protein FtsL;locus_tag=GCA000160335_01034;product=cell division protein FtsL;Dbxref=GO:0000910,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=ftsL;Parent=GCA000160335_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4839,COG:D,KEGG:K03586,RefSeq:WP_000257598.1,SO:0001217,UniParc:UPI00000338FA,UniRef:UniRef100_Q2FZ95,UniRef:UniRef50_Q2FZ95,UniRef:UniRef90_Q2FZ95
contig_1	Pyrodigal	gene	1083761	1085887	.	+	.	ID=GCA000160335_01035_gene;locus_tag=GCA000160335_01035;gene=ftsI
contig_1	Pyrodigal	CDS	1083761	1085887	.	+	0	ID=GCA000160335_01035;Name=Cell division protein FtsI (Peptidoglycan synthetase);locus_tag=GCA000160335_01035;product=Cell division protein FtsI (Peptidoglycan synthetase);gene=ftsI;Parent=GCA000160335_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2815,COG:M,KEGG:K12552,SO:0001217,UniParc:UPI0001EFF0FB,UniRef:UniRef100_A0A380DQM5,UniRef:UniRef50_A0A640MVC3,UniRef:UniRef90_A0A218M1I3;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1086179	1087144	.	+	.	ID=GCA000160335_01036_gene;locus_tag=GCA000160335_01036;gene=mraY
contig_1	Pyrodigal	CDS	1086179	1087144	.	+	0	ID=GCA000160335_01036;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000160335_01036;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000160335_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01000,RefSeq:WP_000578452.1,SO:0001217,UniParc:UPI0001B7007C,UniRef:UniRef100_UPI0001B7007C,UniRef:UniRef50_Q2FZ93,UniRef:UniRef90_Q8NX36;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	1087146	1088495	.	+	.	ID=GCA000160335_01037_gene;locus_tag=GCA000160335_01037;gene=murD
contig_1	Pyrodigal	CDS	1087146	1088495	.	+	0	ID=GCA000160335_01037;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000160335_01037;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000160335_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0771,COG:M,RefSeq:WP_000935984.1,SO:0001217,UniParc:UPI00003B15CE,UniRef:UniRef100_Q6GHQ2,UniRef:UniRef50_Q2FZ92,UniRef:UniRef90_Q2FZ92;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	1088511	1089830	.	+	.	ID=GCA000160335_01038_gene;locus_tag=GCA000160335_01038;gene=divIB
contig_1	Pyrodigal	CDS	1088511	1089830	.	+	0	ID=GCA000160335_01038;Name=Cell division protein DivIB;locus_tag=GCA000160335_01038;product=Cell division protein DivIB;Dbxref=GO:0005886,GO:0032153,GO:0043093;gene=divIB;Parent=GCA000160335_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_000342189.1,SO:0001217,UniParc:UPI00019F4CFE,UniRef:UniRef100_A0A7Z7W1P6,UniRef:UniRef50_Q2FZ91,UniRef:UniRef90_Q2FZ91
contig_1	Pyrodigal	gene	1089936	1091342	.	+	.	ID=GCA000160335_01039_gene;locus_tag=GCA000160335_01039;gene=ftsA
contig_1	Pyrodigal	CDS	1089936	1091342	.	+	0	ID=GCA000160335_01039;Name=cell division protein FtsA;locus_tag=GCA000160335_01039;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0005524,GO:0009898,GO:0032153,GO:0043093;gene=ftsA;Parent=GCA000160335_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_000391030.1,SO:0001217,UniParc:UPI00003B15D0,UniRef:UniRef100_Q6GHQ0,UniRef:UniRef50_O07325,UniRef:UniRef90_O07325
contig_1	Pyrodigal	gene	1091375	1092547	.	+	.	ID=GCA000160335_01040_gene;locus_tag=GCA000160335_01040;gene=ftsZ
contig_1	Pyrodigal	CDS	1091375	1092547	.	+	0	ID=GCA000160335_01040;Name=cell division protein FtsZ;locus_tag=GCA000160335_01040;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258;gene=ftsZ;Parent=GCA000160335_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_000888997.1,SO:0001217,UniParc:UPI00000543C7,UniRef:UniRef100_Q2FZ89,UniRef:UniRef50_Q2FZ89,UniRef:UniRef90_Q2FZ89
contig_1	Pyrodigal	gene	1092805	1093596	.	+	.	ID=GCA000160335_01041_gene;locus_tag=GCA000160335_01041;gene=pgeF
contig_1	Pyrodigal	CDS	1092805	1093596	.	+	0	ID=GCA000160335_01041;Name=peptidoglycan editing factor PgeF;locus_tag=GCA000160335_01041;product=peptidoglycan editing factor PgeF;Dbxref=GO:0004000,GO:0005507,GO:0016491,GO:0017061,GO:0046936;gene=pgeF;Parent=GCA000160335_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_000999333.1,SO:0001217,UniParc:UPI000013B845,UniRef:UniRef100_Q6GHP8,UniRef:UniRef50_Q49WW9,UniRef:UniRef90_Q99US8;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	1093620	1094288	.	+	.	ID=GCA000160335_01042_gene;locus_tag=GCA000160335_01042;gene=yggS
contig_1	Pyrodigal	CDS	1093620	1094288	.	+	0	ID=GCA000160335_01042;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA000160335_01042;product=Pyridoxal phosphate homeostasis protein;gene=yggS;Parent=GCA000160335_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0325,COG:H,RefSeq:WP_001548498.1,SO:0001217,UniParc:UPI0000696C16,UniRef:UniRef100_Q2FZ87,UniRef:UniRef50_U2FRM0,UniRef:UniRef90_Q9ZHA3
contig_1	Pyrodigal	gene	1094285	1094848	.	+	.	ID=GCA000160335_01043_gene;locus_tag=GCA000160335_01043;gene=sepF
contig_1	Pyrodigal	CDS	1094285	1094848	.	+	0	ID=GCA000160335_01043;Name=Cell division protein SepF;locus_tag=GCA000160335_01043;product=Cell division protein SepF;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=sepF;Parent=GCA000160335_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1799,COG:D,RefSeq:WP_000018608.1,SO:0001217,UniParc:UPI00000D7683,UniRef:UniRef100_Q2FZ86,UniRef:UniRef50_Q2FZ86,UniRef:UniRef90_Q2FZ86
contig_1	Pyrodigal	gene	1094860	1095150	.	+	.	ID=GCA000160335_01044_gene;locus_tag=GCA000160335_01044;gene=yggT
contig_1	Pyrodigal	CDS	1094860	1095150	.	+	0	ID=GCA000160335_01044;Name=YggT family protein;locus_tag=GCA000160335_01044;product=YggT family protein;gene=yggT;Parent=GCA000160335_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,RefSeq:WP_000354114.1,SO:0001217,UniParc:UPI00000543C2,UniRef:UniRef100_Q2FZ85,UniRef:UniRef50_Q2FZ85,UniRef:UniRef90_Q2FZ85
contig_1	Pyrodigal	gene	1095233	1095889	.	+	.	ID=GCA000160335_01045_gene;locus_tag=GCA000160335_01045
contig_1	Pyrodigal	CDS	1095233	1095889	.	+	0	ID=GCA000160335_01045;Name=RNA binding protein;locus_tag=GCA000160335_01045;product=RNA binding protein;Parent=GCA000160335_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A8R2BB04,UniRef:UniRef90_A0A6D2GR76
contig_1	Pyrodigal	gene	1095886	1096038	.	+	.	ID=GCA000160335_01046_gene;locus_tag=GCA000160335_01046
contig_1	Pyrodigal	CDS	1095886	1096038	.	+	0	ID=GCA000160335_01046;Name=RNA binding protein;locus_tag=GCA000160335_01046;product=RNA binding protein;Parent=GCA000160335_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E0C659,UniRef:UniRef100_A0A6D2GYK0,UniRef:UniRef50_A0A6D2GYK0,UniRef:UniRef90_A0A6D2GYK0
contig_1	Pyrodigal	gene	1096062	1096679	.	+	.	ID=GCA000160335_01047_gene;locus_tag=GCA000160335_01047;gene=divIVA
contig_1	Pyrodigal	CDS	1096062	1096679	.	+	0	ID=GCA000160335_01047;Name=DivIVA domain-containing protein;locus_tag=GCA000160335_01047;product=DivIVA domain-containing protein;gene=divIVA;Parent=GCA000160335_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001117066.1,SO:0001217,UniParc:UPI00000D777A,UniRef:UniRef100_Q53622,UniRef:UniRef50_Q2FZ83,UniRef:UniRef90_Q2FZ83
contig_1	Pyrodigal	gene	1096900	1099653	.	+	.	ID=GCA000160335_01048_gene;locus_tag=GCA000160335_01048;gene=ileS
contig_1	Pyrodigal	CDS	1096900	1099653	.	+	0	ID=GCA000160335_01048;Name=isoleucine--tRNA ligase IleS;locus_tag=GCA000160335_01048;product=isoleucine--tRNA ligase IleS;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000160335_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_000384706.1,SO:0001217,UniParc:UPI0000136500,UniRef:UniRef100_P41972,UniRef:UniRef50_P41972,UniRef:UniRef90_P41972;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	1099765	1100712	.	-	.	ID=GCA000160335_01049_gene;locus_tag=GCA000160335_01049;gene=tnp
contig_1	Pyrodigal	CDS	1099765	1100712	.	-	0	ID=GCA000160335_01049;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_01049;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121211.1,SO:0001217,UniParc:UPI00001833E5,UniRef:UniRef100_Q9MBM9,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	1100987	1101784	.	+	.	ID=GCA000160335_01050_gene;locus_tag=GCA000160335_01050;gene=catE
contig_1	Pyrodigal	CDS	1100987	1101784	.	+	0	ID=GCA000160335_01050;Name=Glyoxalase;locus_tag=GCA000160335_01050;product=Glyoxalase;gene=catE;Parent=GCA000160335_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_000274850.1,SO:0001217,UniParc:UPI00003B15D3,UniRef:UniRef100_A0A0D1JNZ5,UniRef:UniRef50_A0AAP7IFI2,UniRef:UniRef90_A0A0D1JNZ5
contig_1	Pyrodigal	gene	1102033	1102524	.	+	.	ID=GCA000160335_01051_gene;locus_tag=GCA000160335_01051;gene=lspA
contig_1	Pyrodigal	CDS	1102033	1102524	.	+	0	ID=GCA000160335_01051;Name=signal peptidase II;locus_tag=GCA000160335_01051;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA000160335_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_000549203.1,SO:0001217,UniParc:UPI0001B7009F,UniRef:UniRef100_UPI0001B7009F,UniRef:UniRef50_Q8CPK0,UniRef:UniRef90_Q6GHN9;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	1102524	1103441	.	+	.	ID=GCA000160335_01052_gene;locus_tag=GCA000160335_01052;gene=rluA
contig_1	Pyrodigal	CDS	1102524	1103441	.	+	0	ID=GCA000160335_01052;Name=Pseudouridine synthase;locus_tag=GCA000160335_01052;product=Pseudouridine synthase;gene=rluA;Parent=GCA000160335_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_000451297.1,SO:0001217,UniParc:UPI00003B15D5,UniRef:UniRef100_A0A7Z7W1D0,UniRef:UniRef50_A5I1V5,UniRef:UniRef90_A0A380EGR6;ec_number=5.4.99.23
contig_1	Pyrodigal	gene	1103843	1104370	.	+	.	ID=GCA000160335_01053_gene;locus_tag=GCA000160335_01053;gene=pyrR
contig_1	Pyrodigal	CDS	1103843	1104370	.	+	0	ID=GCA000160335_01053;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA000160335_01053;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0003723,GO:0004845,GO:0006353;gene=pyrR;Parent=GCA000160335_01053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2065,COG:F,KEGG:K02825,RefSeq:WP_000003870.1,SO:0001217,UniParc:UPI00000543B9,UniRef:UniRef100_Q2FZ77,UniRef:UniRef50_Q9K9V4,UniRef:UniRef90_Q2FZ77;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	1104588	1105895	.	+	.	ID=GCA000160335_01054_gene;locus_tag=GCA000160335_01054;gene=uraA
contig_1	Pyrodigal	CDS	1104588	1105895	.	+	0	ID=GCA000160335_01054;Name=Uracil permease%2C putative;locus_tag=GCA000160335_01054;product=Uracil permease%2C putative;gene=uraA;Parent=GCA000160335_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_001178619.1,SO:0001217,UniParc:UPI00000D7719,UniRef:UniRef100_Q2FZ76,UniRef:UniRef50_P39766,UniRef:UniRef90_Q2FZ76
contig_1	Pyrodigal	gene	1105923	1106804	.	+	.	ID=GCA000160335_01055_gene;locus_tag=GCA000160335_01055;gene=pyrB
contig_1	Pyrodigal	CDS	1105923	1106804	.	+	0	ID=GCA000160335_01055;Name=aspartate carbamoyltransferase catalytic subunit;locus_tag=GCA000160335_01055;product=aspartate carbamoyltransferase catalytic subunit;Dbxref=GO:0004070,GO:0005829,GO:0006207,GO:0006520,GO:0016597,GO:0044205;gene=pyrB;Parent=GCA000160335_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0540,COG:F,RefSeq:WP_001016166.1,SO:0001217,UniParc:UPI00000543B7,UniRef:UniRef100_Q2FZ75,UniRef:UniRef50_P05654,UniRef:UniRef90_Q2FZ75;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	1106819	1108096	.	+	.	ID=GCA000160335_01056_gene;locus_tag=GCA000160335_01056;gene=pyrC
contig_1	Pyrodigal	CDS	1106819	1108096	.	+	0	ID=GCA000160335_01056;Name=dihydroorotase;locus_tag=GCA000160335_01056;product=dihydroorotase;Dbxref=GO:0004038,GO:0004151,GO:0005737,GO:0006145,GO:0006221,GO:0008270,GO:0044205,GO:0046872;gene=pyrC;Parent=GCA000160335_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0044,COG:F,SO:0001217,UniParc:UPI00000543B6,UniRef:UniRef100_Q5HGN1,UniRef:UniRef50_Q81WF0,UniRef:UniRef90_Q5HGN1;ec_number=3.5.2.3
contig_1	Pyrodigal	gene	1108098	1109198	.	+	.	ID=GCA000160335_01057_gene;locus_tag=GCA000160335_01057;gene=carA
contig_1	Pyrodigal	CDS	1108098	1109198	.	+	0	ID=GCA000160335_01057;Name=carbamoyl phosphate synthase small subunit;locus_tag=GCA000160335_01057;product=carbamoyl phosphate synthase small subunit;Dbxref=GO:0004088,GO:0004359,GO:0005524,GO:0006207,GO:0006526,GO:0006541,GO:0044205;gene=carA;Parent=GCA000160335_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0505,COG:EF,RefSeq:WP_001190907.1,SO:0001217,UniParc:UPI0001B700A0,UniRef:UniRef100_UPI0001B700A0,UniRef:UniRef50_P25993,UniRef:UniRef90_Q5HGN0;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1109191	1112364	.	+	.	ID=GCA000160335_01058_gene;locus_tag=GCA000160335_01058;gene=carB
contig_1	Pyrodigal	CDS	1109191	1112364	.	+	0	ID=GCA000160335_01058;Name=carbamoyl-phosphate synthase large subunit;locus_tag=GCA000160335_01058;product=carbamoyl-phosphate synthase large subunit;Dbxref=GO:0004087,GO:0004088,GO:0005524,GO:0005737,GO:0006526,GO:0006541,GO:0008152,GO:0044205,GO:0046872;gene=carB;Parent=GCA000160335_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0458,COG:EF,KEGG:K01955,RefSeq:WP_001126264.1,SO:0001217,UniParc:UPI0000052291,UniRef:UniRef100_Q2FZ72,UniRef:UniRef50_P25994,UniRef:UniRef90_P63739;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1112474	1113166	.	+	.	ID=GCA000160335_01059_gene;locus_tag=GCA000160335_01059;gene=pyrF
contig_1	Pyrodigal	CDS	1112474	1113166	.	+	0	ID=GCA000160335_01059;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000160335_01059;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0005829,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA000160335_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,RefSeq:WP_000654067.1,SO:0001217,UniParc:UPI0000132D38,UniRef:UniRef100_P65595,UniRef:UniRef50_P0CB75,UniRef:UniRef90_Q2FZ71;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1113166	1113777	.	+	.	ID=GCA000160335_01060_gene;locus_tag=GCA000160335_01060;gene=pyrE
contig_1	Pyrodigal	CDS	1113166	1113777	.	+	0	ID=GCA000160335_01060;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000160335_01060;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0019856,GO:0044205;gene=pyrE;Parent=GCA000160335_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_001040248.1,SO:0001217,UniParc:UPI0000132CD8,UniRef:UniRef100_P65916,UniRef:UniRef50_P58856,UniRef:UniRef90_P65916;ec_number=2.4.2.10
contig_1	Pyrodigal	gene	1113807	1114019	.	+	.	ID=GCA000160335_01061_gene;locus_tag=GCA000160335_01061
contig_1	Pyrodigal	CDS	1113807	1114019	.	+	0	ID=GCA000160335_01061;Name=hypothetical protein;locus_tag=GCA000160335_01061;product=hypothetical protein;Parent=GCA000160335_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000998559.1,SO:0001217,UniParc:UPI00003B15DB,UniRef:UniRef100_A0A7Z7QY56,UniRef:UniRef50_A0A2K4ADL6,UniRef:UniRef90_Q2FZ69
contig_1	Pyrodigal	gene	1114456	1114857	.	+	.	ID=GCA000160335_01062_gene;locus_tag=GCA000160335_01062
contig_1	Pyrodigal	CDS	1114456	1114857	.	+	0	ID=GCA000160335_01062;Name=PhnB-like domain-containing protein;locus_tag=GCA000160335_01062;product=PhnB-like domain-containing protein;Parent=GCA000160335_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3865,COG:R,RefSeq:WP_000354184.1,SO:0001217,UniParc:UPI00000543B0,UniRef:UniRef100_Q2G1U2,UniRef:UniRef50_Q2G1U2,UniRef:UniRef90_Q2G1U2
contig_1	Pyrodigal	gene	1115120	1116817	.	-	.	ID=GCA000160335_01063_gene;locus_tag=GCA000160335_01063;gene=rqcH
contig_1	Pyrodigal	CDS	1115120	1116817	.	-	0	ID=GCA000160335_01063;Name=Rqc2-like protein RqcH;locus_tag=GCA000160335_01063;product=Rqc2-like protein RqcH;gene=rqcH;Parent=GCA000160335_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1293,COG:JO,RefSeq:WP_000312771.1,SO:0001217,UniParc:UPI00003B15DC,UniRef:UniRef100_A0A7Z7QYV5,UniRef:UniRef50_Q5HPY2,UniRef:UniRef90_A0A0U1MIQ6
contig_1	Pyrodigal	gene	1117092	1117715	.	+	.	ID=GCA000160335_01064_gene;locus_tag=GCA000160335_01064;gene=gmk
contig_1	Pyrodigal	CDS	1117092	1117715	.	+	0	ID=GCA000160335_01064;Name=guanylate kinase;locus_tag=GCA000160335_01064;product=guanylate kinase;Dbxref=GO:0004385,GO:0005524,GO:0005829,GO:0006163;gene=gmk;Parent=GCA000160335_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0194,COG:F,RefSeq:WP_000368225.1,SO:0001217,UniParc:UPI00003B15DD,UniRef:UniRef100_Q6GHM6,UniRef:UniRef50_O34328,UniRef:UniRef90_P0C0M9;ec_number=2.7.4.8
contig_1	Pyrodigal	gene	1117715	1117933	.	+	.	ID=GCA000160335_01065_gene;locus_tag=GCA000160335_01065;gene=rpoZ
contig_1	Pyrodigal	CDS	1117715	1117933	.	+	0	ID=GCA000160335_01065;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA000160335_01065;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351;gene=rpoZ;Parent=GCA000160335_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_000933956.1,SO:0001217,UniParc:UPI00000543AD,UniRef:UniRef100_Q2G1T9,UniRef:UniRef50_Q2G1T9,UniRef:UniRef90_Q2G1T9;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1118149	1119348	.	+	.	ID=GCA000160335_01066_gene;locus_tag=GCA000160335_01066;gene=coaBC
contig_1	Pyrodigal	CDS	1118149	1119348	.	+	0	ID=GCA000160335_01066;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000160335_01066;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941;gene=coaBC;Parent=GCA000160335_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_000722165.1,SO:0001217,UniParc:UPI00000D77D5,UniRef:UniRef100_Q2G268,UniRef:UniRef50_W4QPQ9,UniRef:UniRef90_Q2G268;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	1119348	1121756	.	+	.	ID=GCA000160335_01067_gene;locus_tag=GCA000160335_01067;gene=priA
contig_1	Pyrodigal	CDS	1119348	1121756	.	+	0	ID=GCA000160335_01067;Name=primosomal protein N';locus_tag=GCA000160335_01067;product=primosomal protein N';Dbxref=GO:0003678,GO:0006260,GO:0032508;gene=priA;Parent=GCA000160335_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1198,COG:L,RefSeq:WP_000560856.1,SO:0001217,UniParc:UPI00003B15DE,UniRef:UniRef100_A0AAJ4YXC4,UniRef:UniRef50_A0A0B8RHA5,UniRef:UniRef90_A0A7Z7W1D5;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1122259	1123212	.	+	.	ID=GCA000160335_01068_gene;locus_tag=GCA000160335_01068
contig_1	Pyrodigal	CDS	1122259	1123212	.	+	0	ID=GCA000160335_01068;Name=Lipoprotein;locus_tag=GCA000160335_01068;product=Lipoprotein;Parent=GCA000160335_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000751698.1,SO:0001217,UniParc:UPI00003B15DF,UniRef:UniRef100_A0AAJ4YYP0,UniRef:UniRef50_Q2G264,UniRef:UniRef90_Q2G264
contig_1	Pyrodigal	gene	1123375	1123677	.	-	.	ID=GCA000160335_01069_gene;locus_tag=GCA000160335_01069;gene=tM2
contig_1	Pyrodigal	CDS	1123375	1123677	.	-	0	ID=GCA000160335_01069;Name=TM2 domain-containing protein;locus_tag=GCA000160335_01069;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000160335_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,SO:0001217,UniParc:UPI00019CD4D2,UniRef:UniRef100_Q2G267,UniRef:UniRef50_Q2G267,UniRef:UniRef90_Q2G267
contig_1	Pyrodigal	gene	1123877	1124365	.	+	.	ID=GCA000160335_01070_gene;locus_tag=GCA000160335_01070;gene=def
contig_1	Pyrodigal	CDS	1123877	1124365	.	+	0	ID=GCA000160335_01070;Name=peptide deformylase;locus_tag=GCA000160335_01070;product=peptide deformylase;Dbxref=GO:0006412,GO:0042586,GO:0043686;gene=def;Parent=GCA000160335_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000985287.1,SO:0001217,UniParc:UPI00000D9D9D,UniRef:UniRef100_Q6GHM0,UniRef:UniRef50_Q5HPX6,UniRef:UniRef90_Q5HGL7;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	1124358	1125293	.	+	.	ID=GCA000160335_01071_gene;locus_tag=GCA000160335_01071;gene=fmt
contig_1	Pyrodigal	CDS	1124358	1125293	.	+	0	ID=GCA000160335_01071;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000160335_01071;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000160335_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,RefSeq:WP_000161291.1,SO:0001217,UniParc:UPI000012AB0A,UniRef:UniRef100_P64136,UniRef:UniRef50_P94463,UniRef:UniRef90_Q2FZ68;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	1125290	1126597	.	+	.	ID=GCA000160335_01072_gene;locus_tag=GCA000160335_01072;gene=rsmB
contig_1	Pyrodigal	CDS	1125290	1126597	.	+	0	ID=GCA000160335_01072;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA000160335_01072;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0001510,GO:0003723,GO:0006355,GO:0008168;gene=rsmB;Parent=GCA000160335_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03500,RefSeq:WP_000572248.1,SO:0001217,UniParc:UPI00019CD4D1,UniRef:UniRef100_A0A7Z7QY79,UniRef:UniRef50_A0A2T4MK73,UniRef:UniRef90_A0A7U7JU44;ec_number=2.1.1.176
contig_1	Pyrodigal	gene	1126600	1127694	.	+	.	ID=GCA000160335_01073_gene;locus_tag=GCA000160335_01073;gene=rlmN
contig_1	Pyrodigal	CDS	1126600	1127694	.	+	0	ID=GCA000160335_01073;Name=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;locus_tag=GCA000160335_01073;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0008757,GO:0016433,GO:0019843,GO:0030488,GO:0046677,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000160335_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,RefSeq:WP_000626897.1,SO:0001217,UniParc:UPI00000543A4,UniRef:UniRef100_Q2FZ66,UniRef:UniRef50_O34617,UniRef:UniRef90_Q2FZ66;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	1127701	1128444	.	+	.	ID=GCA000160335_01074_gene;locus_tag=GCA000160335_01074;gene=pTC1
contig_1	Pyrodigal	CDS	1127701	1128444	.	+	0	ID=GCA000160335_01074;Name=protein-serine/threonine phosphatase Stp1;locus_tag=GCA000160335_01074;product=protein-serine/threonine phosphatase Stp1;Dbxref=GO:0004722,GO:0006470;gene=pTC1;Parent=GCA000160335_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000888494,COG:COG0631,COG:T,KEGG:K20074,RefSeq:WP_000888494.1,SO:0001217,UniParc:UPI00000543A3,UniRef:UniRef100_Q2FZ65,UniRef:UniRef50_A0A0D0SSN4,UniRef:UniRef90_A0A7U7PY84;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	1128441	1130435	.	+	.	ID=GCA000160335_01075_gene;locus_tag=GCA000160335_01075;gene=pknB
contig_1	Pyrodigal	CDS	1128441	1130435	.	+	0	ID=GCA000160335_01075;Name=serine/threonine protein kinase Stk1;locus_tag=GCA000160335_01075;product=serine/threonine protein kinase Stk1;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006468,GO:0007165,GO:0009847,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042834,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0071224,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknB;Parent=GCA000160335_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000579564,COG:COG2815,COG:M,RefSeq:WP_000579561.1,SO:0001217,UniParc:UPI0001B700A1,UniRef:UniRef100_UPI0001B700A1,UniRef:UniRef50_A6QGC0,UniRef:UniRef90_A6QGC0;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1130663	1131538	.	+	.	ID=GCA000160335_01076_gene;locus_tag=GCA000160335_01076;gene=rsgA
contig_1	Pyrodigal	CDS	1130663	1131538	.	+	0	ID=GCA000160335_01076;Name=ribosome small subunit-dependent GTPase A;locus_tag=GCA000160335_01076;product=ribosome small subunit-dependent GTPase A;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0006412,GO:0019843,GO:0042274,GO:0043022,GO:0046872;gene=rsgA;Parent=GCA000160335_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,KEGG:K06949,RefSeq:WP_000847923.1,SO:0001217,UniParc:UPI00003B15E1,UniRef:UniRef100_Q6GHL4,UniRef:UniRef50_Q8CSV8,UniRef:UniRef90_Q9KX08;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1131539	1132183	.	+	.	ID=GCA000160335_01077_gene;locus_tag=GCA000160335_01077;gene=rpe
contig_1	Pyrodigal	CDS	1131539	1132183	.	+	0	ID=GCA000160335_01077;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA000160335_01077;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0006098;gene=rpe;Parent=GCA000160335_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0036,COG:G,KEGG:K01783,RefSeq:WP_000164332.1,SO:0001217,UniParc:UPI00000543A0,UniRef:UniRef100_Q2FZ62,UniRef:UniRef50_A0A931T8B0,UniRef:UniRef90_Q2FZ62;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	1132190	1132831	.	+	.	ID=GCA000160335_01078_gene;locus_tag=GCA000160335_01078;gene=thiN
contig_1	Pyrodigal	CDS	1132190	1132831	.	+	0	ID=GCA000160335_01078;Name=thiamine diphosphokinase;locus_tag=GCA000160335_01078;product=thiamine diphosphokinase;Dbxref=GO:0004788,GO:0006772;gene=thiN;Parent=GCA000160335_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1564,COG:H,KEGG:K00949,RefSeq:WP_000547905.1,SO:0001217,UniParc:UPI00000D9DA1,UniRef:UniRef100_Q2FZ61,UniRef:UniRef50_A0A380G740,UniRef:UniRef90_A0A3A5LHB3;ec_number=2.7.6.2
contig_1	Pyrodigal	gene	1133212	1133400	.	-	.	ID=GCA000160335_01079_gene;locus_tag=GCA000160335_01079;gene=rpmB
contig_1	Pyrodigal	CDS	1133212	1133400	.	-	0	ID=GCA000160335_01079;Name=50S ribosomal protein L28;locus_tag=GCA000160335_01079;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000160335_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_000517908.1,SO:0001217,UniParc:UPI000005439D,UniRef:UniRef100_Q2FZ60,UniRef:UniRef50_Q82ZE4,UniRef:UniRef90_Q49X05
contig_1	Pyrodigal	gene	1133843	1134217	.	+	.	ID=GCA000160335_01080_gene;locus_tag=GCA000160335_01080;gene=yloU
contig_1	Pyrodigal	CDS	1133843	1134217	.	+	0	ID=GCA000160335_01080;Name=Alkaline shock protein 23;locus_tag=GCA000160335_01080;product=Alkaline shock protein 23;gene=yloU;Parent=GCA000160335_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000171418.1,SO:0001217,UniParc:UPI00000D7669,UniRef:UniRef100_Q2FZ59,UniRef:UniRef50_O34318,UniRef:UniRef90_A0A7U7JU57
contig_1	Pyrodigal	gene	1134232	1135878	.	+	.	ID=GCA000160335_01081_gene;locus_tag=GCA000160335_01081;gene=fakA
contig_1	Pyrodigal	CDS	1134232	1135878	.	+	0	ID=GCA000160335_01081;Name=fatty acid kinase catalytic subunit FakA;locus_tag=GCA000160335_01081;product=fatty acid kinase catalytic subunit FakA;Dbxref=GO:0004371,GO:0006071;gene=fakA;Parent=GCA000160335_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1461,COG:I,RefSeq:WP_000623906.1,SO:0001217,UniParc:UPI00003B15E2,UniRef:UniRef100_Q6GHK9,UniRef:UniRef50_O34751,UniRef:UniRef90_Q2FZ58
contig_1	Pyrodigal	gene	1136068	1138128	.	+	.	ID=GCA000160335_01082_gene;locus_tag=GCA000160335_01082;gene=recG
contig_1	Pyrodigal	CDS	1136068	1138128	.	+	0	ID=GCA000160335_01082;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000160335_01082;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000160335_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,KEGG:K03655,RefSeq:WP_001151515.1,SO:0001217,UniParc:UPI00003B15E3,UniRef:UniRef100_Q6GHK8,UniRef:UniRef50_O50581,UniRef:UniRef90_O50581;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1138345	1138902	.	+	.	ID=GCA000160335_01083_gene;locus_tag=GCA000160335_01083;gene=fapR
contig_1	Pyrodigal	CDS	1138345	1138902	.	+	0	ID=GCA000160335_01083;Name=transcription factor FapR;locus_tag=GCA000160335_01083;product=transcription factor FapR;Dbxref=GO:0003677,GO:0003700,GO:0006633,GO:0045717,GO:0045892;gene=fapR;Parent=GCA000160335_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000768423.1,SO:0001217,UniParc:UPI00000D78A4,UniRef:UniRef100_Q5HGK5,UniRef:UniRef50_Q4L5T0,UniRef:UniRef90_Q5HGK5
contig_1	Pyrodigal	gene	1138907	1139893	.	+	.	ID=GCA000160335_01084_gene;locus_tag=GCA000160335_01084;gene=plsX
contig_1	Pyrodigal	CDS	1138907	1139893	.	+	0	ID=GCA000160335_01084;Name=phosphate acyltransferase PlsX;locus_tag=GCA000160335_01084;product=phosphate acyltransferase PlsX;Dbxref=GO:0005737,GO:0006633,GO:0008610,GO:0008654,GO:0043811;gene=plsX;Parent=GCA000160335_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0416,COG:I,KEGG:K03621,RefSeq:WP_000239746.1,SO:0001217,UniParc:UPI00003B15E4,UniRef:UniRef100_Q6GHK6,UniRef:UniRef50_P71018,UniRef:UniRef90_Q2FZ55;ec_number=2.3.1.274
contig_1	Pyrodigal	gene	1139886	1140812	.	+	.	ID=GCA000160335_01085_gene;locus_tag=GCA000160335_01085;gene=fabD
contig_1	Pyrodigal	CDS	1139886	1140812	.	+	0	ID=GCA000160335_01085;Name=ACP S-malonyltransferase;locus_tag=GCA000160335_01085;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0005829,GO:0006633;gene=fabD;Parent=GCA000160335_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0331,COG:I,RefSeq:WP_000047355.1,SO:0001217,UniParc:UPI00003B15E5,UniRef:UniRef100_Q6GHK5,UniRef:UniRef50_Q99UN8,UniRef:UniRef90_Q99UN8;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	1140805	1141539	.	+	.	ID=GCA000160335_01086_gene;locus_tag=GCA000160335_01086;gene=fabG
contig_1	Pyrodigal	CDS	1140805	1141539	.	+	0	ID=GCA000160335_01086;Name=3-oxoacyl-[acyl-carrier-protein] reductase;locus_tag=GCA000160335_01086;product=3-oxoacyl-[acyl-carrier-protein] reductase;Dbxref=GO:0004316,GO:0006633,GO:0030497,GO:0050661,GO:0051287;gene=fabG;Parent=GCA000160335_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000167269.1,SO:0001217,UniParc:UPI00004B5BBF,UniRef:UniRef100_Q2FZ53,UniRef:UniRef50_Q5HGK2,UniRef:UniRef90_Q5HGK2;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1141845	1142078	.	+	.	ID=GCA000160335_01087_gene;locus_tag=GCA000160335_01087;gene=acpP
contig_1	Pyrodigal	CDS	1141845	1142078	.	+	0	ID=GCA000160335_01087;Name=acyl carrier protein;locus_tag=GCA000160335_01087;product=acyl carrier protein;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020,GO:0046677;gene=acpP;Parent=GCA000160335_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000426914.1,SO:0001217,UniParc:UPI0000125385,UniRef:UniRef100_Q2FZ51,UniRef:UniRef50_Q2FZ51,UniRef:UniRef90_Q2FZ51
contig_1	Pyrodigal	gene	1142194	1142925	.	+	.	ID=GCA000160335_01088_gene;locus_tag=GCA000160335_01088;gene=rnc
contig_1	Pyrodigal	CDS	1142194	1142925	.	+	0	ID=GCA000160335_01088;Name=ribonuclease III;locus_tag=GCA000160335_01088;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005829,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0019843,GO:0046872;gene=rnc;Parent=GCA000160335_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_000043237.1,SO:0001217,UniParc:UPI0000054AFA,UniRef:UniRef100_Q2FZ50,UniRef:UniRef50_Q2FZ50,UniRef:UniRef90_Q2FZ50;ec_number=3.1.26.3
contig_1	Pyrodigal	gene	1143072	1146638	.	+	.	ID=GCA000160335_01089_gene;locus_tag=GCA000160335_01089;gene=smc
contig_1	Pyrodigal	CDS	1143072	1146638	.	+	0	ID=GCA000160335_01089;Name=chromosome segregation protein SMC;locus_tag=GCA000160335_01089;product=chromosome segregation protein SMC;Dbxref=GO:0005524,GO:0007059,GO:0030261;gene=smc;Parent=GCA000160335_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1196,COG:D,KEGG:K03529,RefSeq:WP_000262715.1,SO:0001217,UniParc:UPI00019F4CD1,UniRef:UniRef100_A0A7Z7QYI5,UniRef:UniRef50_A0A380G9C6,UniRef:UniRef90_A0A2I7Y681
contig_1	Pyrodigal	gene	1146638	1147888	.	+	.	ID=GCA000160335_01090_gene;locus_tag=GCA000160335_01090;gene=ftsY
contig_1	Pyrodigal	CDS	1146638	1147888	.	+	0	ID=GCA000160335_01090;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000160335_01090;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0006614,GO:0009306;gene=ftsY;Parent=GCA000160335_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0552,COG:U,KEGG:K03110,RefSeq:WP_000007673.1,SO:0001217,UniParc:UPI00019F4CD0,UniRef:UniRef100_A0A7Z7QYS7,UniRef:UniRef50_Q2FZ48,UniRef:UniRef90_Q2FZ48
contig_1	Pyrodigal	gene	1147875	1148207	.	+	.	ID=GCA000160335_01091_gene;locus_tag=GCA000160335_01091;gene=ylxM
contig_1	Pyrodigal	CDS	1147875	1148207	.	+	0	ID=GCA000160335_01091;Name=putative DNA-binding protein;locus_tag=GCA000160335_01091;product=putative DNA-binding protein;gene=ylxM;Parent=GCA000160335_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2739,COG:K,RefSeq:WP_000531319.1,SO:0001217,UniParc:UPI00003B15E8,UniRef:UniRef100_Q6GHJ9,UniRef:UniRef50_Q2FZ47,UniRef:UniRef90_Q2FZ47
contig_1	Pyrodigal	gene	1148233	1149600	.	+	.	ID=GCA000160335_01092_gene;locus_tag=GCA000160335_01092;gene=ffh
contig_1	Pyrodigal	CDS	1148233	1149600	.	+	0	ID=GCA000160335_01092;Name=signal recognition particle protein;locus_tag=GCA000160335_01092;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501;gene=ffh;Parent=GCA000160335_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0541,COG:U,RefSeq:WP_000863477.1,SO:0001217,UniParc:UPI0001B700BF,UniRef:UniRef100_UPI0001B700BF,UniRef:UniRef50_P37105,UniRef:UniRef90_A0A7Z7QZ67
contig_1	Pyrodigal	gene	1150035	1150310	.	+	.	ID=GCA000160335_01093_gene;locus_tag=GCA000160335_01093;gene=rpsP
contig_1	Pyrodigal	CDS	1150035	1150310	.	+	0	ID=GCA000160335_01093;Name=30S ribosomal protein S16;locus_tag=GCA000160335_01093;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA000160335_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_000268754.1,SO:0001217,UniParc:UPI0000134D53,UniRef:UniRef100_Q2FZ45,UniRef:UniRef50_Q2FZ45,UniRef:UniRef90_Q2FZ45
contig_1	Pyrodigal	gene	1150498	1151001	.	+	.	ID=GCA000160335_01094_gene;locus_tag=GCA000160335_01094;gene=rimM
contig_1	Pyrodigal	CDS	1150498	1151001	.	+	0	ID=GCA000160335_01094;Name=ribosome maturation factor RimM;locus_tag=GCA000160335_01094;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000160335_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_001261987.1,SO:0001217,UniParc:UPI000013391A,UniRef:UniRef100_Q2FHJ9,UniRef:UniRef50_Q2FZ44,UniRef:UniRef90_Q2FZ44
contig_1	Pyrodigal	gene	1151001	1151738	.	+	.	ID=GCA000160335_01095_gene;locus_tag=GCA000160335_01095;gene=trmD
contig_1	Pyrodigal	CDS	1151001	1151738	.	+	0	ID=GCA000160335_01095;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000160335_01095;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0008033,GO:0052906;gene=trmD;Parent=GCA000160335_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,RefSeq:WP_000687323.1,SO:0001217,UniParc:UPI00003B15EB,UniRef:UniRef100_Q6GHJ5,UniRef:UniRef50_Q6GHJ5,UniRef:UniRef90_Q6GHJ5;ec_number=2.1.1.228
contig_1	Infernal	regulatory_region	1151779	1151821	9e-09	+	.	ID=HBCHLJIIAO_171;Name=Ribosomal protein L19 leader;product=Ribosomal protein L19 leader;Dbxref=RFAM:RF00556;inference=profile:Rfam:RF00556;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1151841	1152191	.	+	.	ID=GCA000160335_01096_gene;locus_tag=GCA000160335_01096;gene=rplS
contig_1	Pyrodigal	CDS	1151841	1152191	.	+	0	ID=GCA000160335_01096;Name=50S ribosomal protein L19;locus_tag=GCA000160335_01096;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000160335_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_000181404.1,SO:0001217,UniParc:UPI0000054AE5,UniRef:UniRef100_Q2FZ42,UniRef:UniRef50_Q8EWU9,UniRef:UniRef90_Q2FZ42
contig_1	Pyrodigal	gene	1152435	1155041	.	-	.	ID=GCA000160335_01097_gene;locus_tag=GCA000160335_01097;gene=yfhO
contig_1	Pyrodigal	CDS	1152435	1155041	.	-	0	ID=GCA000160335_01097;Name=lipoteichoic acid-specific glycosyltransferase YfhO;locus_tag=GCA000160335_01097;product=lipoteichoic acid-specific glycosyltransferase YfhO;gene=yfhO;Parent=GCA000160335_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000915229,COG:COG4485,COG:S,KEGG:K25619,RefSeq:WP_000915257.1,SO:0001217,UniParc:UPI00003B15EC,UniRef:UniRef100_A0AAJ4YXA6,UniRef:UniRef50_Q2FZ40,UniRef:UniRef90_Q2FZ40
contig_1	Pyrodigal	gene	1155442	1156326	.	+	.	ID=GCA000160335_01098_gene;locus_tag=GCA000160335_01098;gene=ylqF
contig_1	Pyrodigal	CDS	1155442	1156326	.	+	0	ID=GCA000160335_01098;Name=ribosome biogenesis GTPase YlqF;locus_tag=GCA000160335_01098;product=ribosome biogenesis GTPase YlqF;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=ylqF;Parent=GCA000160335_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_000236718.1,SO:0001217,UniParc:UPI00003B15ED,UniRef:UniRef100_A0A7Z7W2L2,UniRef:UniRef50_A0A3G6UNR5,UniRef:UniRef90_A0A389V7Z2
contig_1	Pyrodigal	gene	1156310	1157077	.	+	.	ID=GCA000160335_01099_gene;locus_tag=GCA000160335_01099;gene=rnhB
contig_1	Pyrodigal	CDS	1156310	1157077	.	+	0	ID=GCA000160335_01099;Name=ribonuclease HII;locus_tag=GCA000160335_01099;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000160335_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,KEGG:K03470,RefSeq:WP_000176401.1,SO:0001217,UniParc:UPI00003B15EE,UniRef:UniRef100_Q6GHJ1,UniRef:UniRef50_Q6GHJ1,UniRef:UniRef90_Q6GHJ1;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1157186	1158352	.	+	.	ID=GCA000160335_01100_gene;locus_tag=GCA000160335_01100;gene=sucC
contig_1	Pyrodigal	CDS	1157186	1158352	.	+	0	ID=GCA000160335_01100;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000160335_01100;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000160335_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_001020801.1,SO:0001217,UniParc:UPI0000054AE0,UniRef:UniRef100_Q2FZ37,UniRef:UniRef50_Q8UC60,UniRef:UniRef90_Q2FZ37;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1158374	1159282	.	+	.	ID=GCA000160335_01101_gene;locus_tag=GCA000160335_01101;gene=sucD
contig_1	Pyrodigal	CDS	1158374	1159282	.	+	0	ID=GCA000160335_01101;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000160335_01101;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0005829,GO:0006099,GO:0009361;gene=sucD;Parent=GCA000160335_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_000110257.1,SO:0001217,UniParc:UPI0001B700C0,UniRef:UniRef100_UPI0001B700C0,UniRef:UniRef50_P80865,UniRef:UniRef90_Q5HPU4;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1159509	1160039	.	+	.	ID=GCA000160335_01102_gene;locus_tag=GCA000160335_01102
contig_1	Pyrodigal	CDS	1159509	1160039	.	+	0	ID=GCA000160335_01102;Name=YSIRK family Gram-positive signal peptide;locus_tag=GCA000160335_01102;product=YSIRK family Gram-positive signal peptide;Parent=GCA000160335_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AB33UZ40
contig_1	Pyrodigal	gene	1160135	1160626	.	+	.	ID=GCA000160335_01103_gene;locus_tag=GCA000160335_01103
contig_1	Pyrodigal	CDS	1160135	1160626	.	+	0	ID=GCA000160335_01103;Name=CHAP domain-containing protein;locus_tag=GCA000160335_01103;product=CHAP domain-containing protein;Parent=GCA000160335_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F0C49F5,UniRef:UniRef90_UPI000BCCA249
contig_1	Pyrodigal	gene	1160654	1161898	.	+	.	ID=GCA000160335_01104_gene;locus_tag=GCA000160335_01104;gene=fmhC
contig_1	Pyrodigal	CDS	1160654	1161898	.	+	0	ID=GCA000160335_01104;Name=FemA/FemB family glycyltransferase FmhC;locus_tag=GCA000160335_01104;product=FemA/FemB family glycyltransferase FmhC;gene=fmhC;Parent=GCA000160335_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_100495214,COG:COG2348,COG:M,RefSeq:WP_000672864.1,SO:0001217,UniParc:UPI00003B15F2,UniRef:UniRef100_A0A113Z8B5,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_A0A380DRS9
contig_1	Pyrodigal	gene	1162070	1162942	.	+	.	ID=GCA000160335_01105_gene;locus_tag=GCA000160335_01105;gene=dprA
contig_1	Pyrodigal	CDS	1162070	1162942	.	+	0	ID=GCA000160335_01105;Name=DNA-processing protein DprA;locus_tag=GCA000160335_01105;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000160335_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_000620184.1,SO:0001217,UniParc:UPI00003B15F3,UniRef:UniRef100_A0A7Z7QYT5,UniRef:UniRef50_A0A140HKN1,UniRef:UniRef90_A0A140HKN1
contig_1	Pyrodigal	gene	1163116	1165191	.	+	.	ID=GCA000160335_01106_gene;locus_tag=GCA000160335_01106;gene=topA
contig_1	Pyrodigal	CDS	1163116	1165191	.	+	0	ID=GCA000160335_01106;Name=type I DNA topoisomerase;locus_tag=GCA000160335_01106;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872;gene=topA;Parent=GCA000160335_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,KEGG:K03168,RefSeq:WP_001557331.1,SO:0001217,UniParc:UPI00000D9DAC,UniRef:UniRef100_A0A4T9ZI63,UniRef:UniRef50_Q9CG80,UniRef:UniRef90_Q2FZ32;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1165347	1166654	.	+	.	ID=GCA000160335_01107_gene;locus_tag=GCA000160335_01107;gene=trmFO
contig_1	Pyrodigal	CDS	1165347	1166654	.	+	0	ID=GCA000160335_01107;Name=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;locus_tag=GCA000160335_01107;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0047151,GO:0050660;gene=trmFO;Parent=GCA000160335_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1206,COG:J,KEGG:K04094,RefSeq:WP_000195249.1,SO:0001217,UniParc:UPI00019F4CCC,UniRef:UniRef100_UPI00019F4CCC,UniRef:UniRef50_Q2FZ31,UniRef:UniRef90_Q2FZ31;ec_number=2.1.1.74
contig_1	Pyrodigal	gene	1167072	1167968	.	+	.	ID=GCA000160335_01108_gene;locus_tag=GCA000160335_01108;gene=xerC
contig_1	Pyrodigal	CDS	1167072	1167968	.	+	0	ID=GCA000160335_01108;Name=tyrosine recombinase XerC;locus_tag=GCA000160335_01108;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009037,GO:0015074,GO:0051301;gene=xerC;Parent=GCA000160335_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_001015609.1,SO:0001217,UniParc:UPI00003B15F5,UniRef:UniRef100_Q6GHI3,UniRef:UniRef50_Q2FZ30,UniRef:UniRef90_Q2FZ30
contig_1	Pyrodigal	gene	1167965	1168510	.	+	.	ID=GCA000160335_01109_gene;locus_tag=GCA000160335_01109;gene=hslV
contig_1	Pyrodigal	CDS	1167965	1168510	.	+	0	ID=GCA000160335_01109;Name=ATP-dependent protease subunit HslV;locus_tag=GCA000160335_01109;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA000160335_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,KEGG:K01419,RefSeq:WP_000072681.1,SO:0001217,UniParc:UPI0000054AD7,UniRef:UniRef100_Q2FZ29,UniRef:UniRef50_Q2FZ29,UniRef:UniRef90_Q2FZ29;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1168576	1169979	.	+	.	ID=GCA000160335_01110_gene;locus_tag=GCA000160335_01110;gene=hslU
contig_1	Pyrodigal	CDS	1168576	1169979	.	+	0	ID=GCA000160335_01110;Name=ATP-dependent protease ATPase subunit HslU;locus_tag=GCA000160335_01110;product=ATP-dependent protease ATPase subunit HslU;Dbxref=GO:0005524,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603;gene=hslU;Parent=GCA000160335_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_000379050.1,SO:0001217,UniParc:UPI0001B70037,UniRef:UniRef100_UPI0001B70037,UniRef:UniRef50_P63796,UniRef:UniRef90_P63796;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1170004	1170777	.	+	.	ID=GCA000160335_01111_gene;locus_tag=GCA000160335_01111;gene=codY
contig_1	Pyrodigal	CDS	1170004	1170777	.	+	0	ID=GCA000160335_01111;Name=GTP-sensing pleiotropic transcriptional regulator CodY;locus_tag=GCA000160335_01111;product=GTP-sensing pleiotropic transcriptional regulator CodY;Dbxref=GO:0003677,GO:0003700,GO:0005525,GO:0005737,GO:0045892;gene=codY;Parent=GCA000160335_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4465,COG:K,KEGG:K03706,RefSeq:WP_000055337.1,SO:0001217,UniParc:UPI0000054AD5,UniRef:UniRef100_Q2FZ27,UniRef:UniRef50_P39779,UniRef:UniRef90_Q2FZ27
contig_1	Pyrodigal	gene	1171119	1171886	.	+	.	ID=GCA000160335_01112_gene;locus_tag=GCA000160335_01112;gene=rpsB
contig_1	Pyrodigal	CDS	1171119	1171886	.	+	0	ID=GCA000160335_01112;Name=30S ribosomal protein S2;locus_tag=GCA000160335_01112;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000160335_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_000268484.1,SO:0001217,UniParc:UPI0000134F21,UniRef:UniRef100_Q2FZ25,UniRef:UniRef50_P21464,UniRef:UniRef90_Q2FZ25
contig_1	Pyrodigal	gene	1172068	1172949	.	+	.	ID=GCA000160335_01113_gene;locus_tag=GCA000160335_01113;gene=tsf
contig_1	Pyrodigal	CDS	1172068	1172949	.	+	0	ID=GCA000160335_01113;Name=translation elongation factor Ts;locus_tag=GCA000160335_01113;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0005737,GO:0006414;gene=tsf;Parent=GCA000160335_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_000201388.1,SO:0001217,UniParc:UPI0001B700C2,UniRef:UniRef100_UPI0001B700C2,UniRef:UniRef50_Q2FZ23,UniRef:UniRef90_Q2FZ23
contig_1	Pyrodigal	gene	1173086	1173808	.	+	.	ID=GCA000160335_01114_gene;locus_tag=GCA000160335_01114;gene=pyrH
contig_1	Pyrodigal	CDS	1173086	1173808	.	+	0	ID=GCA000160335_01114;Name=UMP kinase;locus_tag=GCA000160335_01114;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000160335_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,RefSeq:WP_000057330.1,SO:0001217,UniParc:UPI0000132DC0,UniRef:UniRef100_Q2FZ22,UniRef:UniRef50_O31749,UniRef:UniRef90_Q2FZ22;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	1173827	1174381	.	+	.	ID=GCA000160335_01115_gene;locus_tag=GCA000160335_01115;gene=frr
contig_1	Pyrodigal	CDS	1173827	1174381	.	+	0	ID=GCA000160335_01115;Name=ribosome recycling factor;locus_tag=GCA000160335_01115;product=ribosome recycling factor;Dbxref=GO:0005737,GO:0006412,GO:0006415,GO:0008135,GO:0043023;gene=frr;Parent=GCA000160335_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_001280006.1,SO:0001217,UniParc:UPI0000054ACC,UniRef:UniRef100_Q2FZ21,UniRef:UniRef50_Q2FZ21,UniRef:UniRef90_Q2FZ21
contig_1	Pyrodigal	gene	1174754	1175524	.	+	.	ID=GCA000160335_01116_gene;locus_tag=GCA000160335_01116;gene=uppS
contig_1	Pyrodigal	CDS	1174754	1175524	.	+	0	ID=GCA000160335_01116;Name=isoprenyl transferase;locus_tag=GCA000160335_01116;product=isoprenyl transferase;Dbxref=GO:0000287,GO:0005829,GO:0008834,GO:0016094,GO:0016765,GO:0030145,GO:0045547;gene=uppS;Parent=GCA000160335_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_000473705.1,SO:0001217,UniParc:UPI00000D9DAE,UniRef:UniRef100_Q5HGH1,UniRef:UniRef50_Q8DRB3,UniRef:UniRef90_P60476;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	1175531	1176313	.	+	.	ID=GCA000160335_01117_gene;locus_tag=GCA000160335_01117;gene=cdsA
contig_1	Pyrodigal	CDS	1175531	1176313	.	+	0	ID=GCA000160335_01117;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA000160335_01117;product=Phosphatidate cytidylyltransferase;Dbxref=GO:0004605,GO:0005886,GO:0016024;gene=cdsA;Parent=GCA000160335_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,RefSeq:WP_000868413.1,SO:0001217,UniParc:UPI0000054ACA,UniRef:UniRef100_Q5HGH0,UniRef:UniRef50_Q49X46,UniRef:UniRef90_Q5HGH0;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	1176525	1177811	.	+	.	ID=GCA000160335_01118_gene;locus_tag=GCA000160335_01118;gene=rseP
contig_1	Pyrodigal	CDS	1176525	1177811	.	+	0	ID=GCA000160335_01118;Name=RIP metalloprotease RseP;locus_tag=GCA000160335_01118;product=RIP metalloprotease RseP;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0016020,GO:0046872;gene=rseP;Parent=GCA000160335_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_000121120.1,SO:0001217,UniParc:UPI00019F4CCA,UniRef:UniRef100_A0A7Z7QY99,UniRef:UniRef50_P63333,UniRef:UniRef90_P63333;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1177831	1179534	.	+	.	ID=GCA000160335_01119_gene;locus_tag=GCA000160335_01119;gene=proS
contig_1	Pyrodigal	CDS	1177831	1179534	.	+	0	ID=GCA000160335_01119;Name=proline--tRNA ligase;locus_tag=GCA000160335_01119;product=proline--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524,GO:0005829,GO:0006418,GO:0006433,GO:0016740;gene=proS;Parent=GCA000160335_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_000814087.1,SO:0001217,UniParc:UPI00003B15F8,UniRef:UniRef100_Q6GHH2,UniRef:UniRef50_Q2G1Z4,UniRef:UniRef90_Q2G1Z4;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	1179792	1184108	.	+	.	ID=GCA000160335_01120_gene;locus_tag=GCA000160335_01120;gene=polC
contig_1	Pyrodigal	CDS	1179792	1184108	.	+	0	ID=GCA000160335_01120;Name=PolC-type DNA polymerase III;locus_tag=GCA000160335_01120;product=PolC-type DNA polymerase III;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006261,GO:0008408;gene=polC;Parent=GCA000160335_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2176,COG:L,KEGG:K03763,SO:0001217,UniParc:UPI00019F4CB2,UniRef:UniRef100_A0A7Z7QZ02,UniRef:UniRef50_Q2G1Z8,UniRef:UniRef90_Q2G1Z8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1184398	1184865	.	+	.	ID=GCA000160335_01121_gene;locus_tag=GCA000160335_01121;gene=rimP
contig_1	Pyrodigal	CDS	1184398	1184865	.	+	0	ID=GCA000160335_01121;Name=ribosome maturation factor RimP;locus_tag=GCA000160335_01121;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000160335_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_000036631.1,SO:0001217,UniParc:UPI00000D9DB0,UniRef:UniRef100_Q2G2D3,UniRef:UniRef50_P32726,UniRef:UniRef90_Q2G2D3
contig_1	Pyrodigal	gene	1184886	1186061	.	+	.	ID=GCA000160335_01122_gene;locus_tag=GCA000160335_01122;gene=nusA
contig_1	Pyrodigal	CDS	1184886	1186061	.	+	0	ID=GCA000160335_01122;Name=transcription termination factor NusA;locus_tag=GCA000160335_01122;product=transcription termination factor NusA;gene=nusA;Parent=GCA000160335_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000097458.1,SO:0001217,UniParc:UPI0001B70039,UniRef:UniRef100_UPI0001B70039,UniRef:UniRef50_K9AT72,UniRef:UniRef90_UPI000DFDA5D8
contig_1	Pyrodigal	gene	1186082	1186366	.	+	.	ID=GCA000160335_01123_gene;locus_tag=GCA000160335_01123;gene=rnpM
contig_1	Pyrodigal	CDS	1186082	1186366	.	+	0	ID=GCA000160335_01123;Name=RNase P modulator RnpM;locus_tag=GCA000160335_01123;product=RNase P modulator RnpM;gene=rnpM;Parent=GCA000160335_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:AJ,COG:COG2740,KEGG:K07742,RefSeq:WP_000727423.1,SO:0001217,UniParc:UPI0000054AC3,UniRef:UniRef100_Q2G2D1,UniRef:UniRef50_A0A920C274,UniRef:UniRef90_Q2G2D1
contig_1	Pyrodigal	gene	1186363	1186491	.	+	.	ID=GCA000160335_01124_gene;locus_tag=GCA000160335_01124
contig_1	Pyrodigal	CDS	1186363	1186491	.	+	0	ID=GCA000160335_01124;Name=hypothetical protein;locus_tag=GCA000160335_01124;product=hypothetical protein;Parent=GCA000160335_01124_gene;inference=ab initio prediction:Pyrodigal:3.5
contig_1	Pyrodigal	gene	1186439	1186681	.	+	.	ID=GCA000160335_01125_gene;locus_tag=GCA000160335_01125
contig_1	Pyrodigal	CDS	1186439	1186681	.	+	0	ID=GCA000160335_01125;Name=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;locus_tag=GCA000160335_01125;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;Parent=GCA000160335_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001021024E
contig_1	Pyrodigal	gene	1186686	1188803	.	+	.	ID=GCA000160335_01126_gene;locus_tag=GCA000160335_01126;gene=infB
contig_1	Pyrodigal	CDS	1186686	1188803	.	+	0	ID=GCA000160335_01126;Name=translation initiation factor IF-2;locus_tag=GCA000160335_01126;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413;gene=infB;Parent=GCA000160335_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0532,COG:J,KEGG:K02519,RefSeq:WP_000043642.1,SO:0001217,UniParc:UPI00003B15FC,UniRef:UniRef100_Q6GHG6,UniRef:UniRef50_P17889,UniRef:UniRef90_P65133
contig_1	Pyrodigal	gene	1189190	1189540	.	+	.	ID=GCA000160335_01127_gene;locus_tag=GCA000160335_01127;gene=rbfA
contig_1	Pyrodigal	CDS	1189190	1189540	.	+	0	ID=GCA000160335_01127;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000160335_01127;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0043024;gene=rbfA;Parent=GCA000160335_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0858,COG:J,RefSeq:WP_000097322.1,SO:0001217,UniParc:UPI00001331BF,UniRef:UniRef100_Q2G2Q4,UniRef:UniRef50_Q2G2Q4,UniRef:UniRef90_Q2G2Q4
contig_1	Pyrodigal	gene	1189710	1190627	.	+	.	ID=GCA000160335_01128_gene;locus_tag=GCA000160335_01128;gene=truB
contig_1	Pyrodigal	CDS	1189710	1190627	.	+	0	ID=GCA000160335_01128;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000160335_01128;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000160335_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,KEGG:K03177,RefSeq:WP_000282296.1,SO:0001217,UniParc:UPI00003B15FD,UniRef:UniRef100_Q6GHG4,UniRef:UniRef50_Q2G2Q3,UniRef:UniRef90_Q2G2Q3;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	1190642	1191613	.	+	.	ID=GCA000160335_01129_gene;locus_tag=GCA000160335_01129;gene=ribF
contig_1	Pyrodigal	CDS	1190642	1191613	.	+	0	ID=GCA000160335_01129;Name=riboflavin biosynthesis protein RibF;locus_tag=GCA000160335_01129;product=riboflavin biosynthesis protein RibF;Dbxref=GO:0003919,GO:0005737,GO:0006747,GO:0009398;gene=ribF;Parent=GCA000160335_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_000864185.1,SO:0001217,UniParc:UPI0000054ABD,UniRef:UniRef100_Q2G2Q2,UniRef:UniRef50_Q2G2Q2,UniRef:UniRef90_Q2G2Q2;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	1191728	1191997	.	+	.	ID=GCA000160335_01130_gene;locus_tag=GCA000160335_01130;gene=rpsO
contig_1	Pyrodigal	CDS	1191728	1191997	.	+	0	ID=GCA000160335_01130;Name=30S ribosomal protein S15;locus_tag=GCA000160335_01130;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000160335_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_001018328.1,SO:0001217,UniParc:UPI000004801C,UniRef:UniRef100_Q2G2Q1,UniRef:UniRef50_Q2G2Q1,UniRef:UniRef90_Q2G2Q1
contig_1	Pyrodigal	gene	1192366	1194462	.	+	.	ID=GCA000160335_01131_gene;locus_tag=GCA000160335_01131;gene=pnp
contig_1	Pyrodigal	CDS	1192366	1194462	.	+	0	ID=GCA000160335_01131;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000160335_01131;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA000160335_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_000076692.1,SO:0001217,UniParc:UPI00003B15FF,UniRef:UniRef100_Q6GHG1,UniRef:UniRef50_Q2FZ20,UniRef:UniRef90_Q2FZ20;ec_number=2.7.7.8
contig_1	Pyrodigal	gene	1194698	1196371	.	+	.	ID=GCA000160335_01132_gene;locus_tag=GCA000160335_01132;gene=rnj2
contig_1	Pyrodigal	CDS	1194698	1196371	.	+	0	ID=GCA000160335_01132;Name=Ribonuclease J 2;locus_tag=GCA000160335_01132;product=Ribonuclease J 2;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnj2;Parent=GCA000160335_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000052599.1,SO:0001217,UniParc:UPI00003B1600,UniRef:UniRef100_Q6GHG0,UniRef:UniRef50_Q2FZ19,UniRef:UniRef90_Q2FZ19;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1196628	1198997	.	+	.	ID=GCA000160335_01133_gene;locus_tag=GCA000160335_01133;gene=ftsK
contig_1	Pyrodigal	CDS	1196628	1198997	.	+	0	ID=GCA000160335_01133;Name=DNA translocase FtsK;locus_tag=GCA000160335_01133;product=DNA translocase FtsK;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0007059,GO:0016887,GO:0051301;gene=ftsK;Parent=GCA000160335_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000035759.1,SO:0001217,UniParc:UPI00003B1601,UniRef:UniRef100_Q6GHF9,UniRef:UniRef50_Q5HGF5,UniRef:UniRef90_Q6GHF9
contig_1	Pyrodigal	gene	1199002	1199715	.	+	.	ID=GCA000160335_01134_gene;locus_tag=GCA000160335_01134;gene=mngR
contig_1	Pyrodigal	CDS	1199002	1199715	.	+	0	ID=GCA000160335_01134;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000160335_01134;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000160335_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_001293307.1,SO:0001217,UniParc:UPI00003B1602,UniRef:UniRef100_Q2FZ17,UniRef:UniRef50_Q2FZ17,UniRef:UniRef90_Q2FZ17
contig_1	Pyrodigal	gene	1199746	1201011	.	+	.	ID=GCA000160335_01135_gene;locus_tag=GCA000160335_01135;gene=yfmF
contig_1	Pyrodigal	CDS	1199746	1201011	.	+	0	ID=GCA000160335_01135;Name=EF-P 5-aminopentanol modification-associated protein YfmF;locus_tag=GCA000160335_01135;product=EF-P 5-aminopentanol modification-associated protein YfmF;gene=yfmF;Parent=GCA000160335_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000089941.1,SO:0001217,UniParc:UPI00000CA9CD,UniRef:UniRef100_Q2FZ16,UniRef:UniRef50_Q2FZ16,UniRef:UniRef90_Q2FZ16
contig_1	Pyrodigal	gene	1201011	1202297	.	+	.	ID=GCA000160335_01136_gene;locus_tag=GCA000160335_01136;gene=yfmH
contig_1	Pyrodigal	CDS	1201011	1202297	.	+	0	ID=GCA000160335_01136;Name=EF-P 5-aminopentanol modification-associated protein YfmH;locus_tag=GCA000160335_01136;product=EF-P 5-aminopentanol modification-associated protein YfmH;gene=yfmH;Parent=GCA000160335_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000664777.1,SO:0001217,UniParc:UPI00003B1603,UniRef:UniRef100_A0A7Z7W1G5,UniRef:UniRef50_A0A7U7PY37,UniRef:UniRef90_A0A7U7PY37
contig_1	Pyrodigal	gene	1202297	1203001	.	+	.	ID=GCA000160335_01137_gene;locus_tag=GCA000160335_01137;gene=ymfI
contig_1	Pyrodigal	CDS	1202297	1203001	.	+	0	ID=GCA000160335_01137;Name=elongation factor P 5-aminopentanone reductase;locus_tag=GCA000160335_01137;product=elongation factor P 5-aminopentanone reductase;gene=ymfI;Parent=GCA000160335_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000646219.1,SO:0001217,UniParc:UPI00003B1604,UniRef:UniRef100_A0A7Z7W1K2,UniRef:UniRef50_A0A380G8X7,UniRef:UniRef90_A0A389U4Z7
contig_1	Pyrodigal	gene	1203106	1203933	.	+	.	ID=GCA000160335_01138_gene;locus_tag=GCA000160335_01138
contig_1	Pyrodigal	CDS	1203106	1203933	.	+	0	ID=GCA000160335_01138;Name=ACT domain-containing protein;locus_tag=GCA000160335_01138;product=ACT domain-containing protein;Parent=GCA000160335_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214890.1,SO:0001217,UniParc:UPI00000D77F9,UniRef:UniRef100_Q2FZ13,UniRef:UniRef50_O31769,UniRef:UniRef90_A0A1J3ZWG3
contig_1	Pyrodigal	gene	1203952	1204344	.	+	.	ID=GCA000160335_01139_gene;locus_tag=GCA000160335_01139;gene=rodZ
contig_1	Pyrodigal	CDS	1203952	1204344	.	+	0	ID=GCA000160335_01139;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_01139;product=HTH cro/C1-type domain-containing protein;gene=rodZ;Parent=GCA000160335_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1426,COG:D,RefSeq:WP_000859443.1,SO:0001217,UniParc:UPI00000D78AE,UniRef:UniRef100_Q2FZ12,UniRef:UniRef50_Q2FZ12,UniRef:UniRef90_Q2FZ12
contig_1	Pyrodigal	gene	1204378	1204956	.	+	.	ID=GCA000160335_01140_gene;locus_tag=GCA000160335_01140;gene=pgsA
contig_1	Pyrodigal	CDS	1204378	1204956	.	+	0	ID=GCA000160335_01140;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;locus_tag=GCA000160335_01140;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;Dbxref=GO:0005886,GO:0006655,GO:0008444,GO:0008654,GO:0016020;gene=pgsA;Parent=GCA000160335_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,KEGG:K00995,RefSeq:WP_001025093.1,SO:0001217,UniParc:UPI0000054AB2,UniRef:UniRef100_Q5HGE8,UniRef:UniRef50_Q5HGE8,UniRef:UniRef90_Q5HGE8;ec_number=2.7.8.5
contig_1	Pyrodigal	gene	1205180	1206331	.	+	.	ID=GCA000160335_01141_gene;locus_tag=GCA000160335_01141;gene=cinA
contig_1	Pyrodigal	CDS	1205180	1206331	.	+	0	ID=GCA000160335_01141;Name=Putative competence-damage inducible protein;locus_tag=GCA000160335_01141;product=Putative competence-damage inducible protein;gene=cinA;Parent=GCA000160335_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1058,COG:L,RefSeq:WP_000020355.1,SO:0001217,UniParc:UPI00019F4CB0,UniRef:UniRef100_A0A7Z7QYE1,UniRef:UniRef50_A0A380G809,UniRef:UniRef90_A0A389XUJ1
contig_1	Pyrodigal	gene	1206496	1207539	.	+	.	ID=GCA000160335_01142_gene;locus_tag=GCA000160335_01142;gene=recA
contig_1	Pyrodigal	CDS	1206496	1207539	.	+	0	ID=GCA000160335_01142;Name=recombinase RecA;locus_tag=GCA000160335_01142;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA000160335_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_000368166.1,SO:0001217,UniParc:UPI000013352D,UniRef:UniRef100_Q5HGE6,UniRef:UniRef50_P0A452,UniRef:UniRef90_Q5HPQ6
contig_1	Pyrodigal	gene	1207893	1209452	.	+	.	ID=GCA000160335_01143_gene;locus_tag=GCA000160335_01143;gene=rny
contig_1	Pyrodigal	CDS	1207893	1209452	.	+	0	ID=GCA000160335_01143;Name=ribonuclease Y;locus_tag=GCA000160335_01143;product=ribonuclease Y;Dbxref=GO:0003723,GO:0004521,GO:0005886,GO:0006402,GO:0016020;gene=rny;Parent=GCA000160335_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,RefSeq:WP_001050910.1,SO:0001217,UniParc:UPI0001B7006A,UniRef:UniRef100_UPI0001B7006A,UniRef:UniRef50_O31774,UniRef:UniRef90_Q2FZ08;ec_number=3.1.-.-
contig_1	Infernal	gene	1209465	1209555	.	+	.	ID=GCA000160335_01144_gene;locus_tag=GCA000160335_01144;gene=sau-27
contig_1	Infernal	ncRNA	1209465	1209555	2.5e-16	+	.	ID=GCA000160335_01144;Name=Staphylococcus sRNA sau-27;locus_tag=GCA000160335_01144;product=Staphylococcus sRNA sau-27;Dbxref=RFAM:RF02387;Parent=GCA000160335_01144_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02387
contig_1	Pyrodigal	gene	1209748	1209963	.	-	.	ID=GCA000160335_01145_gene;locus_tag=GCA000160335_01145
contig_1	Pyrodigal	CDS	1209748	1209963	.	-	0	ID=GCA000160335_01145;Name=Phage protein;locus_tag=GCA000160335_01145;product=Phage protein;Parent=GCA000160335_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000026308.1,SO:0001217,UniParc:UPI0000054AAD,UniRef:UniRef100_Q2FZ07,UniRef:UniRef50_Q2FZ07,UniRef:UniRef90_Q2FZ07
contig_1	Pyrodigal	gene	1210137	1210934	.	+	.	ID=GCA000160335_01146_gene;locus_tag=GCA000160335_01146;gene=ymdB
contig_1	Pyrodigal	CDS	1210137	1210934	.	+	0	ID=GCA000160335_01146;Name=TIGR00282 family metallophosphoesterase;locus_tag=GCA000160335_01146;product=TIGR00282 family metallophosphoesterase;gene=ymdB;Parent=GCA000160335_01146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1692,COG:T,RefSeq:WP_001222103.1,SO:0001217,UniParc:UPI00003B1606,UniRef:UniRef100_A0A7Z7QYH4,UniRef:UniRef50_O31775,UniRef:UniRef90_Q2FZ06
contig_1	Pyrodigal	gene	1211074	1212834	.	+	.	ID=GCA000160335_01147_gene;locus_tag=GCA000160335_01147;gene=porG
contig_1	Pyrodigal	CDS	1211074	1212834	.	+	0	ID=GCA000160335_01147;Name=2-oxoacid ferredoxin oxidoreductase subunit alpha;locus_tag=GCA000160335_01147;product=2-oxoacid ferredoxin oxidoreductase subunit alpha;gene=porG;Parent=GCA000160335_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1014,KEGG:K00174,RefSeq:WP_000804336.1,SO:0001217,UniParc:UPI00019CD744,UniRef:UniRef100_A0A7Z7QYM2,UniRef:UniRef50_A0A840PSQ9,UniRef:UniRef90_A0A380DYA8;ec_number=1.2.7.3
contig_1	Pyrodigal	gene	1212835	1213701	.	+	.	ID=GCA000160335_01148_gene;locus_tag=GCA000160335_01148;gene=porB
contig_1	Pyrodigal	CDS	1212835	1213701	.	+	0	ID=GCA000160335_01148;Name=2-oxoacid ferredoxin oxidoreductase;locus_tag=GCA000160335_01148;product=2-oxoacid ferredoxin oxidoreductase;gene=porB;Parent=GCA000160335_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1013,RefSeq:WP_001141929.1,SO:0001217,UniParc:UPI00003B1608,UniRef:UniRef100_A0A7Z7QYW4,UniRef:UniRef50_A0A239ZH51,UniRef:UniRef90_W8UY88
contig_1	Pyrodigal	gene	1213796	1214089	.	+	.	ID=GCA000160335_01149_gene;locus_tag=GCA000160335_01149;gene=yqgV
contig_1	Pyrodigal	CDS	1213796	1214089	.	+	0	ID=GCA000160335_01149;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000160335_01149;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000160335_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_000655664.1,SO:0001217,UniParc:UPI00019F4CAF,UniRef:UniRef100_A0A7Z7QYC1,UniRef:UniRef50_Q49X83,UniRef:UniRef90_A0A7U7JUD0
contig_1	Pyrodigal	gene	1214223	1215767	.	+	.	ID=GCA000160335_01150_gene;locus_tag=GCA000160335_01150;gene=miaB
contig_1	Pyrodigal	CDS	1214223	1215767	.	+	0	ID=GCA000160335_01150;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000160335_01150;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0035600,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000160335_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_001001521.1,SO:0001217,UniParc:UPI00003B160A,UniRef:UniRef100_Q6GHE3,UniRef:UniRef50_O31778,UniRef:UniRef90_Q2FZ02;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	1215768	1216133	.	+	.	ID=GCA000160335_01151_gene;locus_tag=GCA000160335_01151;gene=ymcA
contig_1	Pyrodigal	CDS	1215768	1216133	.	+	0	ID=GCA000160335_01151;Name=YlbF family regulator;locus_tag=GCA000160335_01151;product=YlbF family regulator;gene=ymcA;Parent=GCA000160335_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4550,COG:T,RefSeq:WP_000282386.1,SO:0001217,UniParc:UPI00000D767C,UniRef:UniRef100_A0A7Z7QZ25,UniRef:UniRef50_Q49X86,UniRef:UniRef90_Q2FZ01
contig_1	Pyrodigal	gene	1216160	1216651	.	+	.	ID=GCA000160335_01152_gene;locus_tag=GCA000160335_01152;gene=thiW
contig_1	Pyrodigal	CDS	1216160	1216651	.	+	0	ID=GCA000160335_01152;Name=energy coupling factor transporter S component ThiW;locus_tag=GCA000160335_01152;product=energy coupling factor transporter S component ThiW;Dbxref=GO:0005215,GO:0006810,GO:0009228;gene=thiW;Parent=GCA000160335_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000842278.1,SO:0001217,UniParc:UPI00003B160B,UniRef:UniRef100_A0A7Z7W1G9,UniRef:UniRef50_Q2FZ00,UniRef:UniRef90_A0A6A9GVI5
contig_1	Pyrodigal	gene	1216954	1219572	.	+	.	ID=GCA000160335_01153_gene;locus_tag=GCA000160335_01153;gene=mutS
contig_1	Pyrodigal	CDS	1216954	1219572	.	+	0	ID=GCA000160335_01153;Name=DNA mismatch repair protein MutS;locus_tag=GCA000160335_01153;product=DNA mismatch repair protein MutS;Dbxref=GO:0003684,GO:0005524,GO:0005829,GO:0006298,GO:0030983,GO:0140664;gene=mutS;Parent=GCA000160335_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000073334.1,SO:0001217,UniParc:UPI00003B160C,UniRef:UniRef100_Q6GHE0,UniRef:UniRef50_Q2FYZ9,UniRef:UniRef90_Q2FYZ9
contig_1	Pyrodigal	gene	1219585	1221594	.	+	.	ID=GCA000160335_01154_gene;locus_tag=GCA000160335_01154;gene=mutL
contig_1	Pyrodigal	CDS	1219585	1221594	.	+	0	ID=GCA000160335_01154;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA000160335_01154;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300,GO:0140664;gene=mutL;Parent=GCA000160335_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_000516249.1,SO:0001217,UniParc:UPI00003B160D,UniRef:UniRef100_Q6GHD9,UniRef:UniRef50_Q93T05,UniRef:UniRef90_Q93T05
contig_1	Pyrodigal	gene	1221609	1222142	.	+	.	ID=GCA000160335_01155_gene;locus_tag=GCA000160335_01155;gene=glpP
contig_1	Pyrodigal	CDS	1221609	1222142	.	+	0	ID=GCA000160335_01155;Name=Glycerol uptake operon antiterminator regulatory protein;locus_tag=GCA000160335_01155;product=Glycerol uptake operon antiterminator regulatory protein;gene=glpP;Parent=GCA000160335_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1954,COG:K,KEGG:K02443,RefSeq:WP_001063535.1,SO:0001217,UniParc:UPI00000D7824,UniRef:UniRef100_A0A7Z7W1G4,UniRef:UniRef50_Q2FYZ7,UniRef:UniRef90_Q2FYZ7
contig_1	Pyrodigal	gene	1222617	1223417	.	+	.	ID=GCA000160335_01156_gene;locus_tag=GCA000160335_01156;gene=glpF
contig_1	Pyrodigal	CDS	1222617	1223417	.	+	0	ID=GCA000160335_01156;Name=Aquaporin family protein;locus_tag=GCA000160335_01156;product=Aquaporin family protein;gene=glpF;Parent=GCA000160335_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0580,COG:G,SO:0001217,UniRef:UniRef50_P18156,UniRef:UniRef90_Q2FYZ6
contig_1	Pyrodigal	gene	1223566	1225062	.	+	.	ID=GCA000160335_01157_gene;locus_tag=GCA000160335_01157;gene=glpK
contig_1	Pyrodigal	CDS	1223566	1225062	.	+	0	ID=GCA000160335_01157;Name=glycerol kinase GlpK;locus_tag=GCA000160335_01157;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563;gene=glpK;Parent=GCA000160335_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,RefSeq:WP_000417379.1,SO:0001217,UniParc:UPI00003B1610,UniRef:UniRef100_Q6GHD5,UniRef:UniRef50_O34153,UniRef:UniRef90_Q2FYZ5;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	1225220	1226893	.	+	.	ID=GCA000160335_01158_gene;locus_tag=GCA000160335_01158;gene=glpD
contig_1	Pyrodigal	CDS	1225220	1226893	.	+	0	ID=GCA000160335_01158;Name=Aerobic glycerol-3-phosphate dehydrogenase;locus_tag=GCA000160335_01158;product=Aerobic glycerol-3-phosphate dehydrogenase;Dbxref=GO:0004368,GO:0005737,GO:0019563,GO:0046168;gene=glpD;Parent=GCA000160335_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_001218603.1,SO:0001217,UniParc:UPI0000EADFB9,UniRef:UniRef100_Q6GHD4,UniRef:UniRef50_Q6GHD4,UniRef:UniRef90_Q6GHD4;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	1227040	1227957	.	+	.	ID=GCA000160335_01159_gene;locus_tag=GCA000160335_01159;gene=pldB
contig_1	Pyrodigal	CDS	1227040	1227957	.	+	0	ID=GCA000160335_01159;Name=Hydrolase%2C alpha/beta fold family domain protein;locus_tag=GCA000160335_01159;product=Hydrolase%2C alpha/beta fold family domain protein;gene=pldB;Parent=GCA000160335_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,SO:0001217,UniParc:UPI00019CD70D,UniRef:UniRef100_A0A7Z7QYC6,UniRef:UniRef50_Q2FYZ3,UniRef:UniRef90_Q2FYZ3
contig_1	Pyrodigal	gene	1227975	1228910	.	+	.	ID=GCA000160335_01160_gene;locus_tag=GCA000160335_01160;gene=miaA
contig_1	Pyrodigal	CDS	1227975	1228910	.	+	0	ID=GCA000160335_01160;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000160335_01160;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000160335_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_001574397.1,SO:0001217,UniParc:UPI00003B1613,UniRef:UniRef100_Q6GHD2,UniRef:UniRef50_Q5HPN8,UniRef:UniRef90_Q2YXR3;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	1228925	1229158	.	+	.	ID=GCA000160335_01161_gene;locus_tag=GCA000160335_01161;gene=hfq
contig_1	Pyrodigal	CDS	1228925	1229158	.	+	0	ID=GCA000160335_01161;Name=RNA chaperone Hfq;locus_tag=GCA000160335_01161;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0016070;gene=hfq;Parent=GCA000160335_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1923,COG:T,RefSeq:WP_000561357.1,SO:0001217,UniParc:UPI00003B1614,UniRef:UniRef100_A0A7Z7QYH9,UniRef:UniRef50_A0A640MVL3,UniRef:UniRef90_A0A7Z7QYH9
contig_1	Pyrodigal	gene	1229380	1229856	.	-	.	ID=GCA000160335_01162_gene;locus_tag=GCA000160335_01162;gene=bsaA
contig_1	Pyrodigal	CDS	1229380	1229856	.	-	0	ID=GCA000160335_01162;Name=Glutathione peroxidase-like protein BsaA;locus_tag=GCA000160335_01162;product=Glutathione peroxidase-like protein BsaA;Dbxref=GO:0004601,GO:0034599;gene=bsaA;Parent=GCA000160335_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_000448078.1,SO:0001217,UniParc:UPI0000054618,UniRef:UniRef100_Q5HGC7,UniRef:UniRef50_Q8CSR9,UniRef:UniRef90_Q5HGC7;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	1229968	1231206	.	+	.	ID=GCA000160335_01163_gene;locus_tag=GCA000160335_01163;gene=hflX
contig_1	Pyrodigal	CDS	1229968	1231206	.	+	0	ID=GCA000160335_01163;Name=GTPase HflX;locus_tag=GCA000160335_01163;product=GTPase HflX;Dbxref=GO:0005525;gene=hflX;Parent=GCA000160335_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2262,COG:J,RefSeq:WP_000068622.1,SO:0001217,UniParc:UPI00019CD70C,UniRef:UniRef100_A0A2W2M8Z4,UniRef:UniRef50_B9DPA4,UniRef:UniRef90_Q2FYY9
contig_1	Pyrodigal	gene	1231225	1232463	.	+	.	ID=GCA000160335_01164_gene;locus_tag=GCA000160335_01164;gene=ynbB
contig_1	Pyrodigal	CDS	1231225	1232463	.	+	0	ID=GCA000160335_01164;Name=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;locus_tag=GCA000160335_01164;product=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;gene=ynbB;Parent=GCA000160335_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4100,COG:PR,RefSeq:WP_000652040.1,SO:0001217,UniParc:UPI00003B1616,UniRef:UniRef100_A0A7Z7QZA6,UniRef:UniRef50_A0A202F6W0,UniRef:UniRef90_Q2FYY8
contig_1	Pyrodigal	gene	1232707	1233075	.	+	.	ID=GCA000160335_01165_gene;locus_tag=GCA000160335_01165;gene=soxR
contig_1	Pyrodigal	CDS	1232707	1233075	.	+	0	ID=GCA000160335_01165;Name=HTH merR-type domain-containing protein;locus_tag=GCA000160335_01165;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000160335_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000624945.1,SO:0001217,UniParc:UPI0000054602,UniRef:UniRef100_Q2FYY7,UniRef:UniRef50_Q2FYY7,UniRef:UniRef90_Q2FYY7
contig_1	Pyrodigal	gene	1233094	1234434	.	+	.	ID=GCA000160335_01166_gene;locus_tag=GCA000160335_01166;gene=glnA
contig_1	Pyrodigal	CDS	1233094	1234434	.	+	0	ID=GCA000160335_01166;Name=type I glutamate--ammonia ligase;locus_tag=GCA000160335_01166;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0006542,GO:0046872;gene=glnA;Parent=GCA000160335_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_001126603.1,SO:0001217,UniParc:UPI000012B701,UniRef:UniRef100_Q5HGC3,UniRef:UniRef50_P12425,UniRef:UniRef90_Q5HGC3;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	1235711	1235800	.	+	.	ID=GCA000160335_01167_gene;locus_tag=GCA000160335_01167;pseudogene=unitary
contig_1	Pyrodigal	CDS	1235711	1235800	.	+	0	ID=GCA000160335_01167;Name=hypothetical protein;locus_tag=GCA000160335_01167;product=hypothetical protein;pseudogene=unitary;Parent=GCA000160335_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002AFC80E,UniRef:UniRef100_A0A7Z7W1U2,UniRef:UniRef50_A0A2X2KYI6,UniRef:UniRef50_A0A7Z7W1U2,UniRef:UniRef90_A0A2X2KYI6,UniRef:UniRef90_A0A7Z7W1U2
contig_1	Pyrodigal	gene	1235827	1236039	.	+	.	ID=GCA000160335_01168_gene;locus_tag=GCA000160335_01168
contig_1	Pyrodigal	CDS	1235827	1236039	.	+	0	ID=GCA000160335_01168;Name=XRE family transcriptional regulator;locus_tag=GCA000160335_01168;product=XRE family transcriptional regulator;Parent=GCA000160335_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001071312.1,SO:0001217,UniParc:UPI00003B1626,UniRef:UniRef100_A0A7Z7W1G8,UniRef:UniRef50_A0A3E0IKC6,UniRef:UniRef90_Q2FYY4
contig_1	Pyrodigal	gene	1236336	1236542	.	+	.	ID=GCA000160335_01169_gene;locus_tag=GCA000160335_01169
contig_1	Pyrodigal	CDS	1236336	1236542	.	+	0	ID=GCA000160335_01169;Name=DNA-binding protein;locus_tag=GCA000160335_01169;product=DNA-binding protein;Parent=GCA000160335_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001002343.1,SO:0001217,UniParc:UPI00003B1627,UniRef:UniRef100_A0A7Z7W2P0,UniRef:UniRef50_Q2FYY3,UniRef:UniRef90_A0A2K4AI64
contig_1	Pyrodigal	gene	1237747	1237932	.	+	.	ID=GCA000160335_01170_gene;locus_tag=GCA000160335_01170
contig_1	Pyrodigal	CDS	1237747	1237932	.	+	0	ID=GCA000160335_01170;Name=DNA-binding protein;locus_tag=GCA000160335_01170;product=DNA-binding protein;Parent=GCA000160335_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000006110.1,SO:0001217,UniParc:UPI00000CAA56,UniRef:UniRef100_Q2FYY1,UniRef:UniRef50_Q2FYY1,UniRef:UniRef90_Q2FYY1
contig_1	Pyrodigal	gene	1238144	1239091	.	-	.	ID=GCA000160335_01171_gene;locus_tag=GCA000160335_01171;gene=tnp
contig_1	Pyrodigal	CDS	1238144	1239091	.	-	0	ID=GCA000160335_01171;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_01171;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121213.1,SO:0001217,UniParc:UPI00003B1628,UniRef:UniRef100_A0A7Z7QYZ4,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	1239518	1239934	.	+	.	ID=GCA000160335_01172_gene;locus_tag=GCA000160335_01172
contig_1	Pyrodigal	CDS	1239518	1239934	.	+	0	ID=GCA000160335_01172;Name=Phage protein;locus_tag=GCA000160335_01172;product=Phage protein;Parent=GCA000160335_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477487.1,SO:0001217,UniParc:UPI00003B1629,UniRef:UniRef100_A0A7Z7QYD2,UniRef:UniRef50_A0A6B5BDK7,UniRef:UniRef90_A0A7U7PZ11
contig_1	Pyrodigal	gene	1241455	1241706	.	+	.	ID=GCA000160335_01173_gene;locus_tag=GCA000160335_01173
contig_1	Pyrodigal	CDS	1241455	1241706	.	+	0	ID=GCA000160335_01173;Name=hypothetical protein;locus_tag=GCA000160335_01173;product=hypothetical protein;Parent=GCA000160335_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000585095.1,SO:0001217,UniParc:UPI00003B162A,UniRef:UniRef100_A0A7Z7QYI8,UniRef:UniRef50_A0A2S6DAZ6,UniRef:UniRef90_A0A8G2HXS0
contig_1	Pyrodigal	gene	1241911	1242432	.	+	.	ID=GCA000160335_01174_gene;locus_tag=GCA000160335_01174
contig_1	Pyrodigal	CDS	1241911	1242432	.	+	0	ID=GCA000160335_01174;Name=Bacterial toxin 50 domain-containing protein;locus_tag=GCA000160335_01174;product=Bacterial toxin 50 domain-containing protein;Parent=GCA000160335_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B162B,UniRef:UniRef100_A0A0E1X7N6,UniRef:UniRef50_A0A0H2VFZ5,UniRef:UniRef90_A0A0E1X7N6
contig_1	Pyrodigal	gene	1242434	1242631	.	+	.	ID=GCA000160335_01175_gene;locus_tag=GCA000160335_01175
contig_1	Pyrodigal	CDS	1242434	1242631	.	+	0	ID=GCA000160335_01175;Name=LSM domain protein;locus_tag=GCA000160335_01175;product=LSM domain protein;Parent=GCA000160335_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000905625.1,SO:0001217,UniParc:UPI00003B162C,UniRef:UniRef100_A0A7Z7QYY5,UniRef:UniRef50_A0A654AFK0,UniRef:UniRef90_A0A7Z7QYY5
contig_1	Pyrodigal	gene	1242791	1243375	.	+	.	ID=GCA000160335_01176_gene;locus_tag=GCA000160335_01176
contig_1	Pyrodigal	CDS	1242791	1243375	.	+	0	ID=GCA000160335_01176;Name=SPP1 gp7 family Phage head morphogenesis protein;locus_tag=GCA000160335_01176;product=SPP1 gp7 family Phage head morphogenesis protein;Parent=GCA000160335_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414196.1,SO:0001217,UniParc:UPI00019F4C93,UniRef:UniRef100_A0A7Z7QYE2,UniRef:UniRef50_A0A7U7JUC4,UniRef:UniRef90_A0A7Z7QYE2
contig_1	Pyrodigal	gene	1243401	1243499	.	+	.	ID=GCA000160335_01177_gene;locus_tag=GCA000160335_01177
contig_1	Pyrodigal	CDS	1243401	1243499	.	+	0	ID=GCA000160335_01177;Name=hypothetical protein;locus_tag=GCA000160335_01177;product=hypothetical protein;Parent=GCA000160335_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CAD65B,UniRef:UniRef100_A0A7Z7QZB3,UniRef:UniRef50_A0A7Z7QZB3,UniRef:UniRef90_A0A7Z7QZB3
contig_1	Pyrodigal	gene	1243702	1243899	.	+	.	ID=GCA000160335_01178_gene;locus_tag=GCA000160335_01178
contig_1	Pyrodigal	CDS	1243702	1243899	.	+	0	ID=GCA000160335_01178;Name=Phage head morphogenesis protein;locus_tag=GCA000160335_01178;product=Phage head morphogenesis protein;Parent=GCA000160335_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B162E,UniRef:UniRef100_A0A0E1X8B5,UniRef:UniRef50_A0A0E1X8B5,UniRef:UniRef90_A0A0E1X8B5
contig_1	Pyrodigal	gene	1244228	1244422	.	+	.	ID=GCA000160335_01179_gene;locus_tag=GCA000160335_01179
contig_1	Pyrodigal	CDS	1244228	1244422	.	+	0	ID=GCA000160335_01179;Name=LSM domain protein;locus_tag=GCA000160335_01179;product=LSM domain protein;Parent=GCA000160335_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217295.1,SO:0001217,UniParc:UPI00003B1630,UniRef:UniRef100_Q2FYW9,UniRef:UniRef50_Q2FYW9,UniRef:UniRef90_Q2FYW9
contig_1	Pyrodigal	gene	1244635	1244868	.	+	.	ID=GCA000160335_01180_gene;locus_tag=GCA000160335_01180
contig_1	Pyrodigal	CDS	1244635	1244868	.	+	0	ID=GCA000160335_01180;Name=Phage head morphogenesis protein;locus_tag=GCA000160335_01180;product=Phage head morphogenesis protein;Parent=GCA000160335_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1631,UniRef:UniRef100_A0A0Z2J5R7,UniRef:UniRef50_A0A6I2KTE3,UniRef:UniRef90_A0A0Z2J5R7
contig_1	Pyrodigal	gene	1245053	1245166	.	+	.	ID=GCA000160335_01181_gene;locus_tag=GCA000160335_01181
contig_1	Pyrodigal	CDS	1245053	1245166	.	+	0	ID=GCA000160335_01181;Name=Phage Mu protein F like protein;locus_tag=GCA000160335_01181;product=Phage Mu protein F like protein;Parent=GCA000160335_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CC7F4F,UniRef:UniRef100_A0A7U7EV89,UniRef:UniRef50_A0A0H2VFZ5,UniRef:UniRef90_A0A7U7EV89
contig_1	Pyrodigal	gene	1245179	1245427	.	+	.	ID=GCA000160335_01182_gene;locus_tag=GCA000160335_01182
contig_1	Pyrodigal	CDS	1245179	1245427	.	+	0	ID=GCA000160335_01182;Name=hypothetical protein;locus_tag=GCA000160335_01182;product=hypothetical protein;Parent=GCA000160335_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000906224.1,SO:0001217,UniParc:UPI00003B1633,UniRef:UniRef100_Q2FYX6,UniRef:UniRef50_Q2FYX6,UniRef:UniRef90_Q2FYX6
contig_1	Pyrodigal	gene	1245578	1245856	.	+	.	ID=GCA000160335_01183_gene;locus_tag=GCA000160335_01183
contig_1	Pyrodigal	CDS	1245578	1245856	.	+	0	ID=GCA000160335_01183;Name=Phage protein;locus_tag=GCA000160335_01183;product=Phage protein;Parent=GCA000160335_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429703.1,SO:0001217,UniParc:UPI00003B1634,UniRef:UniRef100_A0A7Z7W2P8,UniRef:UniRef50_A0A7U7JUC4,UniRef:UniRef90_Q2FYX3
contig_1	Pyrodigal	gene	1245902	1246168	.	+	.	ID=GCA000160335_01184_gene;locus_tag=GCA000160335_01184
contig_1	Pyrodigal	CDS	1245902	1246168	.	+	0	ID=GCA000160335_01184;Name=Phage protein;locus_tag=GCA000160335_01184;product=Phage protein;Parent=GCA000160335_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001574384.1,SO:0001217,UniParc:UPI00019F4C91,UniRef:UniRef100_A0A7Z7QYH3,UniRef:UniRef50_A0A7U7JUC4,UniRef:UniRef90_Q2FYX3
contig_1	Pyrodigal	gene	1246177	1246302	.	+	.	ID=GCA000160335_01185_gene;locus_tag=GCA000160335_01185
contig_1	Pyrodigal	CDS	1246177	1246302	.	+	0	ID=GCA000160335_01185;Name=Phage protein;locus_tag=GCA000160335_01185;product=Phage protein;Parent=GCA000160335_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001EFF15A,UniRef:UniRef100_A0A7Z7QZ04,UniRef:UniRef50_A0A7U7JUI8,UniRef:UniRef90_A0A7U7JUI8
contig_1	Pyrodigal	gene	1246712	1246909	.	+	.	ID=GCA000160335_01186_gene;locus_tag=GCA000160335_01186
contig_1	Pyrodigal	CDS	1246712	1246909	.	+	0	ID=GCA000160335_01186;Name=LSM domain protein;locus_tag=GCA000160335_01186;product=LSM domain protein;Parent=GCA000160335_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001053369.1,SO:0001217,UniParc:UPI00003B1638,UniRef:UniRef100_A0A7Z7QYE6,UniRef:UniRef50_Q2FYW7,UniRef:UniRef90_A0A7Z7QYE6
contig_1	Pyrodigal	gene	1247456	1248481	.	-	.	ID=GCA000160335_01187_gene;locus_tag=GCA000160335_01187;gene=gLY1
contig_1	Pyrodigal	CDS	1247456	1248481	.	-	0	ID=GCA000160335_01187;Name=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;locus_tag=GCA000160335_01187;product=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;gene=gLY1;Parent=GCA000160335_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2008,COG:E,RefSeq:WP_000622698.1,SO:0001217,UniParc:UPI00000D9DC7,UniRef:UniRef100_A0A7Z7QYJ9,UniRef:UniRef50_Q2FYW6,UniRef:UniRef90_Q2FYW6
contig_1	Pyrodigal	gene	1248751	1248948	.	+	.	ID=GCA000160335_01188_gene;locus_tag=GCA000160335_01188
contig_1	Pyrodigal	CDS	1248751	1248948	.	+	0	ID=GCA000160335_01188;Name=Phage protein;locus_tag=GCA000160335_01188;product=Phage protein;Parent=GCA000160335_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435074.1,SO:0001217,UniParc:UPI00003B163A,UniRef:UniRef100_A0A7Z7QYQ4,UniRef:UniRef50_G5JMD9,UniRef:UniRef90_A0A6A9GYQ0
contig_1	Pyrodigal	gene	1249005	1250486	.	+	.	ID=GCA000160335_01189_gene;locus_tag=GCA000160335_01189;gene=cls
contig_1	Pyrodigal	CDS	1249005	1250486	.	+	0	ID=GCA000160335_01189;Name=cardiolipin synthase;locus_tag=GCA000160335_01189;product=cardiolipin synthase;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000160335_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,RefSeq:WP_001160617.1,SO:0001217,UniParc:UPI00003B163B,UniRef:UniRef100_Q6GH88,UniRef:UniRef50_Q8CPD8,UniRef:UniRef90_Q5HGA3;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1250669	1251568	.	+	.	ID=GCA000160335_01190_gene;locus_tag=GCA000160335_01190
contig_1	Pyrodigal	CDS	1250669	1251568	.	+	0	ID=GCA000160335_01190;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_01190;product=ABC transporter ATP-binding protein;Parent=GCA000160335_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000614800.1,SO:0001217,UniParc:UPI0001D169A8,UniRef:UniRef100_A0A7Z7QYF0,UniRef:UniRef50_A0A0D6HPC7,UniRef:UniRef90_A0A077UMM6
contig_1	Pyrodigal	gene	1251537	1252268	.	+	.	ID=GCA000160335_01191_gene;locus_tag=GCA000160335_01191;gene=yadH
contig_1	Pyrodigal	CDS	1251537	1252268	.	+	0	ID=GCA000160335_01191;Name=ABC transmembrane type-2 domain-containing protein;locus_tag=GCA000160335_01191;product=ABC transmembrane type-2 domain-containing protein;gene=yadH;Parent=GCA000160335_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_000603961.1,SO:0001217,UniParc:UPI00003B163D,UniRef:UniRef100_A0A7Z7QZC2,UniRef:UniRef50_Q2FYW2,UniRef:UniRef90_Q2FYW2
contig_1	Pyrodigal	gene	1252272	1253363	.	+	.	ID=GCA000160335_01192_gene;locus_tag=GCA000160335_01192
contig_1	Pyrodigal	CDS	1252272	1253363	.	+	0	ID=GCA000160335_01192;Name=histidine kinase;locus_tag=GCA000160335_01192;product=histidine kinase;Parent=GCA000160335_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07778,RefSeq:WP_000670311.1,SO:0001217,UniParc:UPI00003B163E,UniRef:UniRef100_A0A7Z7QZ60,UniRef:UniRef50_A0A4U9TN42,UniRef:UniRef90_A0A7Z7QZ60;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1253360	1253962	.	+	.	ID=GCA000160335_01193_gene;locus_tag=GCA000160335_01193;gene=citB
contig_1	Pyrodigal	CDS	1253360	1253962	.	+	0	ID=GCA000160335_01193;Name=Response regulator transcription factor;locus_tag=GCA000160335_01193;product=Response regulator transcription factor;gene=citB;Parent=GCA000160335_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_000624456.1,SO:0001217,UniParc:UPI00019F4C90,UniRef:UniRef100_A0A7Z7W1I1,UniRef:UniRef50_Q2FYW0,UniRef:UniRef90_Q2FYW0
contig_1	Pyrodigal	gene	1254075	1254263	.	-	.	ID=GCA000160335_01194_gene;locus_tag=GCA000160335_01194;gene=lapA
contig_1	Pyrodigal	CDS	1254075	1254263	.	-	0	ID=GCA000160335_01194;Name=LapA family protein;locus_tag=GCA000160335_01194;product=LapA family protein;gene=lapA;Parent=GCA000160335_01194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001027143.1,SO:0001217,UniParc:UPI00000544C0,UniRef:UniRef100_Q2FYV9,UniRef:UniRef50_Q2FYV9,UniRef:UniRef90_Q2FYV9
contig_1	Pyrodigal	gene	1254402	1254935	.	+	.	ID=GCA000160335_01195_gene;locus_tag=GCA000160335_01195;gene=nucI
contig_1	Pyrodigal	CDS	1254402	1254935	.	+	0	ID=GCA000160335_01195;Name=thermonuclease NucI;locus_tag=GCA000160335_01195;product=thermonuclease NucI;Dbxref=GO:0003676,GO:0016894;gene=nucI;Parent=GCA000160335_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_000841344.1,SO:0001217,UniParc:UPI00003B1640,UniRef:UniRef100_A0A0E1X605,UniRef:UniRef50_P43270,UniRef:UniRef90_A0A7U7PYI0;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	1255078	1255932	.	-	.	ID=GCA000160335_01196_gene;locus_tag=GCA000160335_01196
contig_1	Pyrodigal	CDS	1255078	1255932	.	-	0	ID=GCA000160335_01196;Name=NERD domain-containing protein;locus_tag=GCA000160335_01196;product=NERD domain-containing protein;Parent=GCA000160335_01196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011827.1,SO:0001217,UniParc:UPI00003B1641,UniRef:UniRef100_A0A0E1XGC0,UniRef:UniRef50_G5JGH5,UniRef:UniRef90_A0A0E1XGC0
contig_1	Pyrodigal	gene	1256254	1256838	.	+	.	ID=GCA000160335_01197_gene;locus_tag=GCA000160335_01197
contig_1	Pyrodigal	CDS	1256254	1256838	.	+	0	ID=GCA000160335_01197;Name=Phage protein;locus_tag=GCA000160335_01197;product=Phage protein;Parent=GCA000160335_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D854F4,UniRef:UniRef100_A0A7Z7W2Q0,UniRef:UniRef50_A0A1S1GQT7,UniRef:UniRef90_A0A7Z7W2Q0
contig_1	Pyrodigal	gene	1256892	1258274	.	-	.	ID=GCA000160335_01198_gene;locus_tag=GCA000160335_01198;gene=metL1
contig_1	Pyrodigal	CDS	1256892	1258274	.	-	0	ID=GCA000160335_01198;Name=aspartate kinase;locus_tag=GCA000160335_01198;product=aspartate kinase;Dbxref=GO:0004072,GO:0009089;gene=metL1;Parent=GCA000160335_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000868645.1,SO:0001217,UniParc:UPI00000D7823,UniRef:UniRef100_Q2FYV5,UniRef:UniRef50_A0A6V7RA03,UniRef:UniRef90_A0A077UJG8;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1258465	1259745	.	+	.	ID=GCA000160335_01199_gene;locus_tag=GCA000160335_01199;gene=thrA
contig_1	Pyrodigal	CDS	1258465	1259745	.	+	0	ID=GCA000160335_01199;Name=Homoserine dehydrogenase;locus_tag=GCA000160335_01199;product=Homoserine dehydrogenase;gene=thrA;Parent=GCA000160335_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0460,COG:E,RefSeq:WP_000735863.1,SO:0001217,UniParc:UPI00003B1644,UniRef:UniRef100_A0A7Z7QZ07,UniRef:UniRef50_B9DP89,UniRef:UniRef90_A0A2K4AHW8
contig_1	Pyrodigal	gene	1259751	1260812	.	+	.	ID=GCA000160335_01200_gene;locus_tag=GCA000160335_01200;gene=thrC
contig_1	Pyrodigal	CDS	1259751	1260812	.	+	0	ID=GCA000160335_01200;Name=threonine synthase;locus_tag=GCA000160335_01200;product=threonine synthase;Dbxref=GO:0004795,GO:0009088;gene=thrC;Parent=GCA000160335_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01733,RefSeq:WP_001255453.1,SO:0001217,UniParc:UPI00019F4E79,UniRef:UniRef100_A0A7Z7QYE9,UniRef:UniRef50_Q9K7E3,UniRef:UniRef90_A0A7Z7QYE9;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	1260814	1261728	.	+	.	ID=GCA000160335_01201_gene;locus_tag=GCA000160335_01201;gene=thrB
contig_1	Pyrodigal	CDS	1260814	1261728	.	+	0	ID=GCA000160335_01201;Name=homoserine kinase;locus_tag=GCA000160335_01201;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000160335_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,RefSeq:WP_000073177.1,SO:0001217,UniParc:UPI00003B1646,UniRef:UniRef100_Q6GH76,UniRef:UniRef50_Q2FYV2,UniRef:UniRef90_Q2FYV2;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	1261786	1262589	.	+	.	ID=GCA000160335_01202_gene;locus_tag=GCA000160335_01202;gene=cof
contig_1	Pyrodigal	CDS	1261786	1262589	.	+	0	ID=GCA000160335_01202;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000160335_01202;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000160335_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_000186306.1,SO:0001217,UniParc:UPI00003B1647,UniRef:UniRef100_A0A7Z7QYK7,UniRef:UniRef50_Q2FYV1,UniRef:UniRef90_Q2FYV1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	1262881	1263195	.	-	.	ID=GCA000160335_01203_gene;locus_tag=GCA000160335_01203
contig_1	Pyrodigal	CDS	1262881	1263195	.	-	0	ID=GCA000160335_01203;Name=Phage protein;locus_tag=GCA000160335_01203;product=Phage protein;Parent=GCA000160335_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580200.1,SO:0001217,UniParc:UPI0001B7008C,UniRef:UniRef100_UPI0001B7008C,UniRef:UniRef50_B9DP93,UniRef:UniRef90_Q2FYV0
contig_1	Pyrodigal	gene	1263414	1264868	.	-	.	ID=GCA000160335_01204_gene;locus_tag=GCA000160335_01204;gene=lysP
contig_1	Pyrodigal	CDS	1263414	1264868	.	-	0	ID=GCA000160335_01204;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000160335_01204;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000160335_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,RefSeq:WP_000389946.1,SO:0001217,UniParc:UPI00003B1648,UniRef:UniRef100_A0A7Z7QZ06,UniRef:UniRef50_Q2FYU8,UniRef:UniRef90_Q2FYU8
contig_1	Pyrodigal	gene	1265072	1266589	.	+	.	ID=GCA000160335_01205_gene;locus_tag=GCA000160335_01205;gene=katA
contig_1	Pyrodigal	CDS	1265072	1266589	.	+	0	ID=GCA000160335_01205;Name=Catalase;locus_tag=GCA000160335_01205;product=Catalase;Dbxref=GO:0004096,GO:0005737,GO:0020037,GO:0042542,GO:0042744,GO:0046872;gene=katA;Parent=GCA000160335_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0753,COG:P,KEGG:K03781,RefSeq:WP_000089857.1,SO:0001217,UniParc:UPI00003B1649,UniRef:UniRef100_Q6GH72,UniRef:UniRef50_O52762,UniRef:UniRef90_Q2FYU7;ec_number=1.11.1.6
contig_1	Pyrodigal	gene	1266680	1266829	.	+	.	ID=GCA000160335_01206_gene;locus_tag=GCA000160335_01206;gene=rpmG
contig_1	Pyrodigal	CDS	1266680	1266829	.	+	0	ID=GCA000160335_01206;Name=50S ribosomal protein L33;locus_tag=GCA000160335_01206;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000160335_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265708.1,SO:0001217,UniParc:UPI0000132FC6,UniRef:UniRef100_Q2FYU6,UniRef:UniRef50_Q2FYU6,UniRef:UniRef90_Q2FYU6
contig_1	Pyrodigal	gene	1267283	1267552	.	+	.	ID=GCA000160335_01207_gene;locus_tag=GCA000160335_01207;gene=rpsN
contig_1	Pyrodigal	CDS	1267283	1267552	.	+	0	ID=GCA000160335_01207;Name=30S ribosomal protein S14;locus_tag=GCA000160335_01207;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000160335_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,RefSeq:WP_001085657.1,SO:0001217,UniParc:UPI00003B164A,UniRef:UniRef100_Q6GH70,UniRef:UniRef50_Q5HPK6,UniRef:UniRef90_Q5HPK6
contig_1	Pyrodigal	gene	1267709	1268686	.	+	.	ID=GCA000160335_01208_gene;locus_tag=GCA000160335_01208
contig_1	Pyrodigal	CDS	1267709	1268686	.	+	0	ID=GCA000160335_01208;Name=GMP reductase;locus_tag=GCA000160335_01208;product=GMP reductase;Parent=GCA000160335_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000688127.1,SO:0001217,UniParc:UPI00003B164B,UniRef:UniRef100_Q6GH69,UniRef:UniRef90_Q4L646
contig_1	Pyrodigal	gene	1268861	1269724	.	+	.	ID=GCA000160335_01209_gene;locus_tag=GCA000160335_01209
contig_1	Pyrodigal	CDS	1268861	1269724	.	+	0	ID=GCA000160335_01209;Name=CAP domain-containing protein;locus_tag=GCA000160335_01209;product=CAP domain-containing protein;Parent=GCA000160335_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD64C,UniRef:UniRef100_A0A7Z7W1M8,UniRef:UniRef50_Q49XD3,UniRef:UniRef90_Q2FYU2
contig_1	Pyrodigal	gene	1270104	1270727	.	-	.	ID=GCA000160335_01210_gene;locus_tag=GCA000160335_01210;gene=lexA
contig_1	Pyrodigal	CDS	1270104	1270727	.	-	0	ID=GCA000160335_01210;Name=transcriptional repressor LexA;locus_tag=GCA000160335_01210;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0009432,GO:0045892;gene=lexA;Parent=GCA000160335_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_001208760.1,SO:0001217,UniParc:UPI00000543FA,UniRef:UniRef100_Q2FYU1,UniRef:UniRef50_Q81A92,UniRef:UniRef90_Q2FYU1;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	1270867	1271103	.	+	.	ID=GCA000160335_01211_gene;locus_tag=GCA000160335_01211;gene=sosA
contig_1	Pyrodigal	CDS	1270867	1271103	.	+	0	ID=GCA000160335_01211;Name=DNA damage-induced cell division inhibitor SosA;locus_tag=GCA000160335_01211;product=DNA damage-induced cell division inhibitor SosA;gene=sosA;Parent=GCA000160335_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B164D,UniRef:UniRef100_A0A0E1XG93,UniRef:UniRef50_A0A0E1XG93,UniRef:UniRef90_A0A0E1XG93
contig_1	Pyrodigal	gene	1271239	1271478	.	+	.	ID=GCA000160335_01212_gene;locus_tag=GCA000160335_01212;gene=ynzC
contig_1	Pyrodigal	CDS	1271239	1271478	.	+	0	ID=GCA000160335_01212;Name=UPF0291 protein SACOL1376;locus_tag=GCA000160335_01212;product=UPF0291 protein SACOL1376;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000160335_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000071351.1,SO:0001217,UniParc:UPI00000D776D,UniRef:UniRef100_P60076,UniRef:UniRef50_P60076,UniRef:UniRef90_P60076
contig_1	Pyrodigal	gene	1271599	1273587	.	+	.	ID=GCA000160335_01213_gene;locus_tag=GCA000160335_01213;gene=tkt
contig_1	Pyrodigal	CDS	1271599	1273587	.	+	0	ID=GCA000160335_01213;Name=transketolase;locus_tag=GCA000160335_01213;product=transketolase;Dbxref=GO:0004802,GO:0005829,GO:0006098,GO:0006310,GO:0019253,GO:0046872;gene=tkt;Parent=GCA000160335_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_000481438.1,SO:0001217,UniParc:UPI00019CD64A,UniRef:UniRef100_A0A7Z7QYJ6,UniRef:UniRef50_P22976,UniRef:UniRef90_Q5HG77;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	1273820	1274107	.	+	.	ID=GCA000160335_01214_gene;locus_tag=GCA000160335_01214;gene=yneF
contig_1	Pyrodigal	CDS	1273820	1274107	.	+	0	ID=GCA000160335_01214;Name=UPF0154 protein SaurJH1_1431;locus_tag=GCA000160335_01214;product=UPF0154 protein SaurJH1_1431;Dbxref=GO:0005886;gene=yneF;Parent=GCA000160335_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3763,COG:S,KEGG:K09976,RefSeq:WP_001548645.1,SO:0001217,UniParc:UPI0000696C25,UniRef:UniRef100_P67291,UniRef:UniRef50_P67288,UniRef:UniRef90_P67291
contig_1	Pyrodigal	gene	1274286	1274753	.	+	.	ID=GCA000160335_01215_gene;locus_tag=GCA000160335_01215;gene=ccdC
contig_1	Pyrodigal	CDS	1274286	1274753	.	+	0	ID=GCA000160335_01215;Name=DUF1453 domain-containing protein;locus_tag=GCA000160335_01215;product=DUF1453 domain-containing protein;gene=ccdC;Parent=GCA000160335_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4846,COG:T,RefSeq:WP_000966146.1,SO:0001217,UniParc:UPI00003B164F,UniRef:UniRef100_A0A7Z7QYF7,UniRef:UniRef50_Q2FYT5,UniRef:UniRef90_Q2FYT5
contig_1	Pyrodigal	gene	1274877	1275998	.	+	.	ID=GCA000160335_01216_gene;locus_tag=GCA000160335_01216;gene=sbcD
contig_1	Pyrodigal	CDS	1274877	1275998	.	+	0	ID=GCA000160335_01216;Name=exonuclease subunit SbcD;locus_tag=GCA000160335_01216;product=exonuclease subunit SbcD;Dbxref=GO:0004519,GO:0004527,GO:0006260,GO:0006310,GO:0008408;gene=sbcD;Parent=GCA000160335_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000691309.1,SO:0001217,UniParc:UPI00003B1650,UniRef:UniRef100_Q6GH61,UniRef:UniRef50_Q2FYT4,UniRef:UniRef90_Q2FYT4;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1276002	1279031	.	+	.	ID=GCA000160335_01217_gene;locus_tag=GCA000160335_01217;gene=sbcC
contig_1	Pyrodigal	CDS	1276002	1279031	.	+	0	ID=GCA000160335_01217;Name=exonuclease subunit SbcC;locus_tag=GCA000160335_01217;product=exonuclease subunit SbcC;Dbxref=GO:0004519,GO:0004527,GO:0005524,GO:0006260,GO:0006302,GO:0006310,GO:0016887;gene=sbcC;Parent=GCA000160335_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0419,COG:L,RefSeq:WP_000803176.1,SO:0001217,UniParc:UPI00003B1651,UniRef:UniRef100_Q6GH60,UniRef:UniRef50_Q2FYT3,UniRef:UniRef90_Q2FYT3;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1279102	1279464	.	-	.	ID=GCA000160335_01218_gene;locus_tag=GCA000160335_01218;gene=mscL
contig_1	Pyrodigal	CDS	1279102	1279464	.	-	0	ID=GCA000160335_01218;Name=large conductance mechanosensitive channel protein MscL;locus_tag=GCA000160335_01218;product=large conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0008381,GO:0042802;gene=mscL;Parent=GCA000160335_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,KEGG:K03282,RefSeq:WP_000910489.1,SO:0001217,UniParc:UPI000012F5E4,UniRef:UniRef100_P68805,UniRef:UniRef50_P68805,UniRef:UniRef90_P68805
contig_1	Pyrodigal	gene	1279668	1281314	.	+	.	ID=GCA000160335_01219_gene;locus_tag=GCA000160335_01219;gene=betT
contig_1	Pyrodigal	CDS	1279668	1281314	.	+	0	ID=GCA000160335_01219;Name=Glycine betaine transporter;locus_tag=GCA000160335_01219;product=Glycine betaine transporter;gene=betT;Parent=GCA000160335_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_001088984.1,SO:0001217,UniParc:UPI00019F4E76,UniRef:UniRef100_A0A7Z7QZ21,UniRef:UniRef50_A0A1D4R1U3,UniRef:UniRef90_A0A7U7JUD7
contig_1	Pyrodigal	gene	1281882	1284587	.	+	.	ID=GCA000160335_01220_gene;locus_tag=GCA000160335_01220;gene=acnA
contig_1	Pyrodigal	CDS	1281882	1284587	.	+	0	ID=GCA000160335_01220;Name=aconitate hydratase AcnA;locus_tag=GCA000160335_01220;product=aconitate hydratase AcnA;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0006099,GO:0019679,GO:0046872,GO:0047456,GO:0051539;gene=acnA;Parent=GCA000160335_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1048,KEGG:K27802,RefSeq:WP_000729731.1,SO:0001217,UniParc:UPI00019F4E75,UniRef:UniRef100_A0A7Z7QYH2,UniRef:UniRef50_Q9RTN7,UniRef:UniRef90_Q8CPC2;ec_number=4.2.1.3
contig_1	Pyrodigal	gene	1284768	1285235	.	+	.	ID=GCA000160335_01221_gene;locus_tag=GCA000160335_01221;gene=menI
contig_1	Pyrodigal	CDS	1284768	1285235	.	+	0	ID=GCA000160335_01221;Name=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;locus_tag=GCA000160335_01221;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;Dbxref=GO:0009234;gene=menI;Parent=GCA000160335_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,KEGG:K07107,RefSeq:WP_000640483.1,SO:0001217,UniParc:UPI00003B1654,UniRef:UniRef100_A0A7Z7QZE5,UniRef:UniRef50_Q2FYS8,UniRef:UniRef90_Q2FYS8;ec_number=3.1.2.28
contig_1	Pyrodigal	gene	1285444	1285740	.	-	.	ID=GCA000160335_01222_gene;locus_tag=GCA000160335_01222
contig_1	Pyrodigal	CDS	1285444	1285740	.	-	0	ID=GCA000160335_01222;Name=Iron-sulfur cluster biosynthesis protein;locus_tag=GCA000160335_01222;product=Iron-sulfur cluster biosynthesis protein;Parent=GCA000160335_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165376.1,SO:0001217,UniParc:UPI00019F4E74,UniRef:UniRef100_A0A7Z7QZ75,UniRef:UniRef50_Q2FYS7,UniRef:UniRef90_A0A7Z7QZ75
contig_1	Infernal	gene	1285732	1285983	.	+	.	ID=GCA000160335_01223_gene;locus_tag=GCA000160335_01223;gene=S35
contig_1	Infernal	ncRNA	1285732	1285983	8.8e-12	+	.	ID=GCA000160335_01223;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01223;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01223_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1286118	1286726	.	-	.	ID=GCA000160335_01224_gene;locus_tag=GCA000160335_01224;gene=plsY
contig_1	Pyrodigal	CDS	1286118	1286726	.	-	0	ID=GCA000160335_01224;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA000160335_01224;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772;gene=plsY;Parent=GCA000160335_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_000972779.1,SO:0001217,UniParc:UPI000013A85C,UniRef:UniRef100_P67163,UniRef:UniRef50_Q2FYS6,UniRef:UniRef90_Q2FYS6;ec_number=2.3.1.275
contig_1	Pyrodigal	gene	1286932	1288923	.	+	.	ID=GCA000160335_01225_gene;locus_tag=GCA000160335_01225;gene=parE
contig_1	Pyrodigal	CDS	1286932	1288923	.	+	0	ID=GCA000160335_01225;Name=DNA topoisomerase IV subunit B;locus_tag=GCA000160335_01225;product=DNA topoisomerase IV subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872;gene=parE;Parent=GCA000160335_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,RefSeq:WP_001574370.1,SO:0001217,UniParc:UPI000175BBF1,UniRef:UniRef100_A0A0E1X7H6,UniRef:UniRef50_Q59961,UniRef:UniRef90_Q2FYS5;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1288923	1291325	.	+	.	ID=GCA000160335_01226_gene;locus_tag=GCA000160335_01226;gene=parC
contig_1	Pyrodigal	CDS	1288923	1291325	.	+	0	ID=GCA000160335_01226;Name=DNA topoisomerase IV subunit A ParC;locus_tag=GCA000160335_01226;product=DNA topoisomerase IV subunit A ParC;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006265,GO:0007059,GO:0009330,GO:0019897,GO:0034335;gene=parC;Parent=GCA000160335_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_001289586.1,SO:0001217,UniParc:UPI00019CD618,UniRef:UniRef100_A0A7Z7W1W5,UniRef:UniRef50_P72525,UniRef:UniRef90_Q2FYS4;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1291575	1293035	.	+	.	ID=GCA000160335_01227_gene;locus_tag=GCA000160335_01227;gene=alsT
contig_1	Pyrodigal	CDS	1291575	1293035	.	+	0	ID=GCA000160335_01227;Name=Amino acid carrier protein;locus_tag=GCA000160335_01227;product=Amino acid carrier protein;gene=alsT;Parent=GCA000160335_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000651159.1,SO:0001217,UniParc:UPI00003B1658,UniRef:UniRef100_A0A7Z7W1I5,UniRef:UniRef50_A0A078M5B3,UniRef:UniRef90_A0A0U1MK54
contig_1	Pyrodigal	gene	1293535	1294386	.	+	.	ID=GCA000160335_01228_gene;locus_tag=GCA000160335_01228;gene=glcT
contig_1	Pyrodigal	CDS	1293535	1294386	.	+	0	ID=GCA000160335_01228;Name=glucose PTS transporter transcription antiterminator GlcT;locus_tag=GCA000160335_01228;product=glucose PTS transporter transcription antiterminator GlcT;Dbxref=GO:0003723,GO:0045893;gene=glcT;Parent=GCA000160335_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03480,RefSeq:WP_000505016.1,SO:0001217,UniParc:UPI00003B1659,UniRef:UniRef100_Q6GH48,UniRef:UniRef50_O33618,UniRef:UniRef90_Q2G2N4
contig_1	Pyrodigal	gene	1294581	1295729	.	+	.	ID=GCA000160335_01229_gene;locus_tag=GCA000160335_01229;gene=perM
contig_1	Pyrodigal	CDS	1294581	1295729	.	+	0	ID=GCA000160335_01229;Name=AI-2E family transporter;locus_tag=GCA000160335_01229;product=AI-2E family transporter;gene=perM;Parent=GCA000160335_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000673632.1,SO:0001217,UniParc:UPI0001BAF7E0,UniRef:UniRef100_Q2G2N2,UniRef:UniRef50_Q2G2N2,UniRef:UniRef90_Q2G2N2
contig_1	Pyrodigal	gene	1296210	1298732	.	+	.	ID=GCA000160335_01230_gene;locus_tag=GCA000160335_01230;gene=mprF
contig_1	Pyrodigal	CDS	1296210	1298732	.	+	0	ID=GCA000160335_01230;Name=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;locus_tag=GCA000160335_01230;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;Dbxref=GO:0005886,GO:0006629,GO:0046677,GO:0050071,GO:0055091;gene=mprF;Parent=GCA000160335_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2898,COG:I,KEGG:K14205,RefSeq:WP_001071160.1,SO:0001217,UniParc:UPI00003B165A,UniRef:UniRef100_Q6GH45,UniRef:UniRef50_Q2G2M2,UniRef:UniRef90_Q2G2M2;ec_number=2.3.2.3
contig_1	Pyrodigal	gene	1298935	1299444	.	-	.	ID=GCA000160335_01231_gene;locus_tag=GCA000160335_01231;gene=msrA1
contig_1	Pyrodigal	CDS	1298935	1299444	.	-	0	ID=GCA000160335_01231;Name=Peptide methionine sulfoxide reductase MsrA 1;locus_tag=GCA000160335_01231;product=Peptide methionine sulfoxide reductase MsrA 1;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA1;Parent=GCA000160335_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_001024830.1,SO:0001217,UniParc:UPI000012F5B2,UniRef:UniRef100_P0A084,UniRef:UniRef50_P0A084,UniRef:UniRef90_P0A084;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1299581	1300564	.	+	.	ID=GCA000160335_01232_gene;locus_tag=GCA000160335_01232;gene=msrR
contig_1	Pyrodigal	CDS	1299581	1300564	.	+	0	ID=GCA000160335_01232;Name=Regulatory protein MsrR;locus_tag=GCA000160335_01232;product=Regulatory protein MsrR;Dbxref=GO:0005886;gene=msrR;Parent=GCA000160335_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000356975.1,SO:0001217,UniParc:UPI00000549E5,UniRef:UniRef100_Q7BHL7,UniRef:UniRef50_Q7BHL7,UniRef:UniRef90_Q7BHL7;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1300641	1302242	.	-	.	ID=GCA000160335_01233_gene;locus_tag=GCA000160335_01233;gene=tnp
contig_1	Pyrodigal	CDS	1300641	1302242	.	-	0	ID=GCA000160335_01233;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_01233;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,SO:0001217,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	1302232	1302457	.	+	.	ID=GCA000160335_01234_gene;locus_tag=GCA000160335_01234;gene=tsr24
contig_1	Infernal	ncRNA	1302232	1302457	1.1e-28	+	.	ID=GCA000160335_01234;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_01234;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_01234_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1302566	1302754	.	-	.	ID=GCA000160335_01235_gene;locus_tag=GCA000160335_01235;gene=pptA
contig_1	Pyrodigal	CDS	1302566	1302754	.	-	0	ID=GCA000160335_01235;Name=2-hydroxymuconate tautomerase;locus_tag=GCA000160335_01235;product=2-hydroxymuconate tautomerase;Dbxref=GO:0008152,GO:0016853,GO:0016862;gene=pptA;Parent=GCA000160335_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1942,COG:Q,RefSeq:WP_001548680.1,SO:0001217,UniParc:UPI00000549E3,UniRef:UniRef100_P99132,UniRef:UniRef50_Q814P5,UniRef:UniRef90_P99132;ec_number=5.3.2.6
contig_1	Pyrodigal	gene	1302899	1304161	.	+	.	ID=GCA000160335_01236_gene;locus_tag=GCA000160335_01236;gene=dinP
contig_1	Pyrodigal	CDS	1302899	1304161	.	+	0	ID=GCA000160335_01236;Name=UmuC domain-containing protein;locus_tag=GCA000160335_01236;product=UmuC domain-containing protein;gene=dinP;Parent=GCA000160335_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_000283026.1,SO:0001217,UniParc:UPI00019F4E56,UniRef:UniRef100_A0A7Z7QZ32,UniRef:UniRef50_A0A6N3A9E1,UniRef:UniRef90_Q2FYS2
contig_1	Pyrodigal	gene	1304297	1305388	.	-	.	ID=GCA000160335_01237_gene;locus_tag=GCA000160335_01237;gene=tyrA
contig_1	Pyrodigal	CDS	1304297	1305388	.	-	0	ID=GCA000160335_01237;Name=prephenate dehydrogenase;locus_tag=GCA000160335_01237;product=prephenate dehydrogenase;Dbxref=GO:0004665,GO:0006571,GO:0008977,GO:0070403;gene=tyrA;Parent=GCA000160335_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0287,COG:E,RefSeq:WP_000214282.1,SO:0001217,UniParc:UPI00003B165D,UniRef:UniRef100_Q6GH39,UniRef:UniRef50_Q2FYS1,UniRef:UniRef90_Q2FYS1;ec_number=1.3.1.12
contig_1	Pyrodigal	gene	1305553	1306584	.	+	.	ID=GCA000160335_01238_gene;locus_tag=GCA000160335_01238;gene=frvX
contig_1	Pyrodigal	CDS	1305553	1306584	.	+	0	ID=GCA000160335_01238;Name=Aminopeptidase;locus_tag=GCA000160335_01238;product=Aminopeptidase;gene=frvX;Parent=GCA000160335_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,KEGG:K01269,RefSeq:WP_000433352.1,SO:0001217,UniParc:UPI00003B165E,UniRef:UniRef100_A0A7Z7QZF1,UniRef:UniRef50_O07603,UniRef:UniRef90_A0A0E7NTZ3;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	1307077	1308483	.	+	.	ID=GCA000160335_01239_gene;locus_tag=GCA000160335_01239;gene=trpE
contig_1	Pyrodigal	CDS	1307077	1308483	.	+	0	ID=GCA000160335_01239;Name=anthranilate synthase component I;locus_tag=GCA000160335_01239;product=anthranilate synthase component I;gene=trpE;Parent=GCA000160335_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_000382430.1,SO:0001217,UniParc:UPI00003B165F,UniRef:UniRef100_A0A7Z7QZ85,UniRef:UniRef50_A0A6N3A4A0,UniRef:UniRef90_A0A7U7EYB1;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1308480	1309046	.	+	.	ID=GCA000160335_01240_gene;locus_tag=GCA000160335_01240;gene=pabA
contig_1	Pyrodigal	CDS	1308480	1309046	.	+	0	ID=GCA000160335_01240;Name=Anthranilate synthase component II;locus_tag=GCA000160335_01240;product=Anthranilate synthase component II;gene=pabA;Parent=GCA000160335_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000604802.1,SO:0001217,UniParc:UPI00003B1660,UniRef:UniRef100_A0A7Z7W1J5,UniRef:UniRef50_B9DP49,UniRef:UniRef90_A0A390DEC3
contig_1	Pyrodigal	gene	1309052	1310050	.	+	.	ID=GCA000160335_01241_gene;locus_tag=GCA000160335_01241;gene=trpD
contig_1	Pyrodigal	CDS	1309052	1310050	.	+	0	ID=GCA000160335_01241;Name=Anthranilate phosphoribosyltransferase;locus_tag=GCA000160335_01241;product=Anthranilate phosphoribosyltransferase;Dbxref=GO:0000162,GO:0000287,GO:0004048,GO:0005829;gene=trpD;Parent=GCA000160335_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,KEGG:K00766,RefSeq:WP_000173851.1,SO:0001217,UniParc:UPI00021AE3B9,UniRef:UniRef100_A0A2X2JWN2,UniRef:UniRef50_Q2FYR7,UniRef:UniRef90_Q2FYR7;ec_number=2.4.2.18
contig_1	Pyrodigal	gene	1310052	1310834	.	+	.	ID=GCA000160335_01242_gene;locus_tag=GCA000160335_01242;gene=trpC
contig_1	Pyrodigal	CDS	1310052	1310834	.	+	0	ID=GCA000160335_01242;Name=indole-3-glycerol phosphate synthase TrpC;locus_tag=GCA000160335_01242;product=indole-3-glycerol phosphate synthase TrpC;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpC;Parent=GCA000160335_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0134,COG:E,RefSeq:WP_000153717.1,SO:0001217,UniParc:UPI00003B1661,UniRef:UniRef100_Q6GH35,UniRef:UniRef50_Q2FYR6,UniRef:UniRef90_Q2FYR6;ec_number=4.1.1.48
contig_1	Pyrodigal	gene	1310831	1311466	.	+	.	ID=GCA000160335_01243_gene;locus_tag=GCA000160335_01243;gene=trpF
contig_1	Pyrodigal	CDS	1310831	1311466	.	+	0	ID=GCA000160335_01243;Name=phosphoribosylanthranilate isomerase;locus_tag=GCA000160335_01243;product=phosphoribosylanthranilate isomerase;Dbxref=GO:0000162,GO:0004640,GO:0006568;gene=trpF;Parent=GCA000160335_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD5E3,UniRef:UniRef100_Q6GH34,UniRef:UniRef50_Q2FYR5,UniRef:UniRef90_Q6GH34;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1311459	1312673	.	+	.	ID=GCA000160335_01244_gene;locus_tag=GCA000160335_01244;gene=trpB
contig_1	Pyrodigal	CDS	1311459	1312673	.	+	0	ID=GCA000160335_01244;Name=tryptophan synthase subunit beta;locus_tag=GCA000160335_01244;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA000160335_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,RefSeq:WP_001041343.1,SO:0001217,UniParc:UPI00003B1663,UniRef:UniRef100_Q6GH33,UniRef:UniRef50_P07600,UniRef:UniRef90_Q2FYR4;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1312666	1313394	.	+	.	ID=GCA000160335_01245_gene;locus_tag=GCA000160335_01245;gene=trpA
contig_1	Pyrodigal	CDS	1312666	1313394	.	+	0	ID=GCA000160335_01245;Name=tryptophan synthase subunit alpha;locus_tag=GCA000160335_01245;product=tryptophan synthase subunit alpha;Dbxref=GO:0000162,GO:0004834,GO:0005829,GO:0006568;gene=trpA;Parent=GCA000160335_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0159,COG:E,KEGG:K01695,RefSeq:WP_000163621.1,SO:0001217,UniParc:UPI00003B1664,UniRef:UniRef100_Q6GH32,UniRef:UniRef50_Q2FYR3,UniRef:UniRef90_Q2FYR3;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1313716	1314978	.	+	.	ID=GCA000160335_01246_gene;locus_tag=GCA000160335_01246;gene=femA
contig_1	Pyrodigal	CDS	1313716	1314978	.	+	0	ID=GCA000160335_01246;Name=glycine glycyltransferase FemA;locus_tag=GCA000160335_01246;product=glycine glycyltransferase FemA;Dbxref=GO:0000166,GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femA;Parent=GCA000160335_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673309,COG:COG2348,COG:M,RefSeq:WP_000673317.1,SO:0001217,UniParc:UPI00003B1665,UniRef:UniRef100_Q6GH31,UniRef:UniRef50_Q2FYR2,UniRef:UniRef90_Q2FYR2;ec_number=2.3.2.17
contig_1	Pyrodigal	gene	1314997	1316256	.	+	.	ID=GCA000160335_01247_gene;locus_tag=GCA000160335_01247;gene=femB
contig_1	Pyrodigal	CDS	1314997	1316256	.	+	0	ID=GCA000160335_01247;Name=glycine glycyltransferase FemB;locus_tag=GCA000160335_01247;product=glycine glycyltransferase FemB;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0071555;gene=femB;Parent=GCA000160335_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673098,COG:COG2348,COG:M,KEGG:K11695,RefSeq:WP_000673098.1,SO:0001217,UniParc:UPI00000549D5,UniRef:UniRef100_Q2FYR1,UniRef:UniRef50_Q2FYR1,UniRef:UniRef90_Q2FYR1;ec_number=2.3.2.18
contig_1	Pyrodigal	gene	1317118	1317687	.	+	.	ID=GCA000160335_01248_gene;locus_tag=GCA000160335_01248
contig_1	Pyrodigal	CDS	1317118	1317687	.	+	0	ID=GCA000160335_01248;Name=Hydrolase;locus_tag=GCA000160335_01248;product=Hydrolase;Parent=GCA000160335_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD5E1,UniRef:UniRef100_A0A7Z7QYN7,UniRef:UniRef50_Q2FYR0,UniRef:UniRef90_A0A0H3JW28
contig_1	Pyrodigal	gene	1317735	1318193	.	-	.	ID=GCA000160335_01249_gene;locus_tag=GCA000160335_01249
contig_1	Pyrodigal	CDS	1317735	1318193	.	-	0	ID=GCA000160335_01249;Name=SWIM-type domain-containing protein;locus_tag=GCA000160335_01249;product=SWIM-type domain-containing protein;Parent=GCA000160335_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000523664.1,SO:0001217,UniParc:UPI0001B700B3,UniRef:UniRef100_UPI0001B700B3,UniRef:UniRef50_Q2FYQ9,UniRef:UniRef90_Q2FYQ9
contig_1	Pyrodigal	gene	1318316	1319017	.	-	.	ID=GCA000160335_01250_gene;locus_tag=GCA000160335_01250;gene=nikE
contig_1	Pyrodigal	CDS	1318316	1319017	.	-	0	ID=GCA000160335_01250;Name=Nickel import system ATP-binding protein NikE;locus_tag=GCA000160335_01250;product=Nickel import system ATP-binding protein NikE;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0016887;gene=nikE;Parent=GCA000160335_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000571253.1,SO:0001217,UniParc:UPI00003B1667,UniRef:UniRef100_Q6GH28,UniRef:UniRef50_Q2FYQ8,UniRef:UniRef90_Q2FYQ8;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	1319010	1319783	.	-	.	ID=GCA000160335_01251_gene;locus_tag=GCA000160335_01251;gene=nikD
contig_1	Pyrodigal	CDS	1319010	1319783	.	-	0	ID=GCA000160335_01251;Name=Nickel import system ATP-binding protein NikD;locus_tag=GCA000160335_01251;product=Nickel import system ATP-binding protein NikD;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0016887;gene=nikD;Parent=GCA000160335_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000052330.1,SO:0001217,UniParc:UPI00003B1668,UniRef:UniRef100_Q6GH27,UniRef:UniRef50_Q2FYQ7,UniRef:UniRef90_Q2FYQ7;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	1319770	1320600	.	-	.	ID=GCA000160335_01252_gene;locus_tag=GCA000160335_01252;gene=nikC
contig_1	Pyrodigal	CDS	1319770	1320600	.	-	0	ID=GCA000160335_01252;Name=nickel transporter permease;locus_tag=GCA000160335_01252;product=nickel transporter permease;Dbxref=GO:0005886,GO:0015675,GO:0043190,GO:0055085,GO:0140359;gene=nikC;Parent=GCA000160335_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000548927.1,SO:0001217,UniParc:UPI00003B1669,UniRef:UniRef100_Q6GH26,UniRef:UniRef50_Q2FYQ6,UniRef:UniRef90_Q2FYQ6
contig_1	Pyrodigal	gene	1320593	1321579	.	-	.	ID=GCA000160335_01253_gene;locus_tag=GCA000160335_01253;gene=nikB
contig_1	Pyrodigal	CDS	1320593	1321579	.	-	0	ID=GCA000160335_01253;Name=nickel ABC transporter permease;locus_tag=GCA000160335_01253;product=nickel ABC transporter permease;Dbxref=GO:0005886,GO:0015099,GO:0043190,GO:0140359;gene=nikB;Parent=GCA000160335_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000469932.1,SO:0001217,UniParc:UPI00003B166A,UniRef:UniRef100_Q6GH25,UniRef:UniRef50_Q2FYQ5,UniRef:UniRef90_Q2FYQ5
contig_1	Pyrodigal	gene	1321883	1322227	.	-	.	ID=GCA000160335_01254_gene;locus_tag=GCA000160335_01254
contig_1	Pyrodigal	CDS	1321883	1322227	.	-	0	ID=GCA000160335_01254;Name=Permease;locus_tag=GCA000160335_01254;product=Permease;Parent=GCA000160335_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171798.1,SO:0001217,UniParc:UPI00000D788B,UniRef:UniRef100_Q2FYQ3,UniRef:UniRef50_A0A3A0VJ57,UniRef:UniRef90_Q2FYQ3
contig_1	Pyrodigal	gene	1322432	1324246	.	+	.	ID=GCA000160335_01255_gene;locus_tag=GCA000160335_01255;gene=pepF
contig_1	Pyrodigal	CDS	1322432	1324246	.	+	0	ID=GCA000160335_01255;Name=oligoendopeptidase F;locus_tag=GCA000160335_01255;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000160335_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000077549.1,SO:0001217,UniParc:UPI00003B166B,UniRef:UniRef100_A0A0E1X7E7,UniRef:UniRef50_A0A7X9ZKX9,UniRef:UniRef90_A0A641AAT8;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1324386	1325027	.	-	.	ID=GCA000160335_01256_gene;locus_tag=GCA000160335_01256;gene=phoU
contig_1	Pyrodigal	CDS	1324386	1325027	.	-	0	ID=GCA000160335_01256;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000160335_01256;product=phosphate signaling complex protein PhoU;Dbxref=GO:0006817,GO:0030643,GO:0045936;gene=phoU;Parent=GCA000160335_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0704,COG:P,RefSeq:WP_000974850.1,SO:0001217,UniParc:UPI00003B166C,UniRef:UniRef100_A0A7Z7W1X9,UniRef:UniRef50_A0A4R6BXI3,UniRef:UniRef90_A0A2K4AIT2
contig_1	Pyrodigal	gene	1325034	1325885	.	-	.	ID=GCA000160335_01257_gene;locus_tag=GCA000160335_01257;gene=pstB
contig_1	Pyrodigal	CDS	1325034	1325885	.	-	0	ID=GCA000160335_01257;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000160335_01257;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000160335_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_000079448.1,SO:0001217,UniParc:UPI00003B166D,UniRef:UniRef100_Q6GH21,UniRef:UniRef50_Q2FYQ0,UniRef:UniRef90_Q2FYQ0;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1325932	1326849	.	-	.	ID=GCA000160335_01258_gene;locus_tag=GCA000160335_01258;gene=pstA
contig_1	Pyrodigal	CDS	1325932	1326849	.	-	0	ID=GCA000160335_01258;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000160335_01258;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstA;Parent=GCA000160335_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0581,COG:P,RefSeq:WP_000450299.1,SO:0001217,UniParc:UPI00003B166E,UniRef:UniRef100_A0A162H532,UniRef:UniRef50_B9E6T5,UniRef:UniRef90_A0A380EIN5
contig_1	Pyrodigal	gene	1326851	1327777	.	-	.	ID=GCA000160335_01259_gene;locus_tag=GCA000160335_01259;gene=pstC
contig_1	Pyrodigal	CDS	1326851	1327777	.	-	0	ID=GCA000160335_01259;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000160335_01259;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstC;Parent=GCA000160335_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0573,COG:P,RefSeq:WP_000204625.1,SO:0001217,UniParc:UPI00000D9DE2,UniRef:UniRef100_Q2FYP8,UniRef:UniRef50_A0A235FA99,UniRef:UniRef90_A0A380EHK1
contig_1	Pyrodigal	gene	1327968	1328951	.	-	.	ID=GCA000160335_01260_gene;locus_tag=GCA000160335_01260;gene=pstS
contig_1	Pyrodigal	CDS	1327968	1328951	.	-	0	ID=GCA000160335_01260;Name=Phosphate-binding protein PstS;locus_tag=GCA000160335_01260;product=Phosphate-binding protein PstS;Dbxref=GO:0005886,GO:0006817,GO:0042301;gene=pstS;Parent=GCA000160335_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0226,COG:P,RefSeq:WP_000759233.1,SO:0001217,UniParc:UPI00003B166F,UniRef:UniRef100_Q6GH18,UniRef:UniRef50_Q49XJ1,UniRef:UniRef90_Q2FYP6
contig_1	Pyrodigal	gene	1329262	1330164	.	-	.	ID=GCA000160335_01261_gene;locus_tag=GCA000160335_01261;gene=cvfB
contig_1	Pyrodigal	CDS	1329262	1330164	.	-	0	ID=GCA000160335_01261;Name=RNA-binding virulence regulatory protein CvfB;locus_tag=GCA000160335_01261;product=RNA-binding virulence regulatory protein CvfB;gene=cvfB;Parent=GCA000160335_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001095445,BlastRules:WP_001162352,RefSeq:WP_001162353.1,SO:0001217,UniParc:UPI0001B700B4,UniRef:UniRef100_UPI0001B700B4,UniRef:UniRef50_Q2FYP3,UniRef:UniRef90_Q2FYP3
contig_1	Pyrodigal	gene	1330311	1331912	.	+	.	ID=GCA000160335_01262_gene;locus_tag=GCA000160335_01262;gene=uup
contig_1	Pyrodigal	CDS	1330311	1331912	.	+	0	ID=GCA000160335_01262;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_01262;product=ABC transporter domain-containing protein;gene=uup;Parent=GCA000160335_01262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000942303.1,SO:0001217,UniParc:UPI00000CAB93,UniRef:UniRef100_A0A7U7IEZ5,UniRef:UniRef50_R5Y8E8,UniRef:UniRef90_S2YJP1
contig_1	Infernal	regulatory_region	1332512	1332687	2.6e-15	+	.	ID=HBCHLJIIAO_155;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1332769	1333974	.	+	.	ID=GCA000160335_01263_gene;locus_tag=GCA000160335_01263;gene=metL1
contig_1	Pyrodigal	CDS	1332769	1333974	.	+	0	ID=GCA000160335_01263;Name=aspartate kinase;locus_tag=GCA000160335_01263;product=aspartate kinase;gene=metL1;Parent=GCA000160335_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000258725.1,SO:0001217,UniParc:UPI00003B1671,UniRef:UniRef100_A0A163VD66,UniRef:UniRef50_B9EBZ4,UniRef:UniRef90_A0A0H2WZ50;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1334038	1335027	.	+	.	ID=GCA000160335_01264_gene;locus_tag=GCA000160335_01264;gene=asd
contig_1	Pyrodigal	CDS	1334038	1335027	.	+	0	ID=GCA000160335_01264;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000160335_01264;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0008652,GO:0016620,GO:0051287;gene=asd;Parent=GCA000160335_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_000163520.1,SO:0001217,UniParc:UPI00003B1672,UniRef:UniRef100_A0AAJ5CTR1,UniRef:UniRef50_A0A2T4PUK5,UniRef:UniRef90_A0A7Z7QZD9;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	1335029	1335916	.	+	.	ID=GCA000160335_01265_gene;locus_tag=GCA000160335_01265;gene=dapA
contig_1	Pyrodigal	CDS	1335029	1335916	.	+	0	ID=GCA000160335_01265;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000160335_01265;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000160335_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_000149267.1,SO:0001217,UniParc:UPI00003B1673,UniRef:UniRef100_Q6GH13,UniRef:UniRef50_Q6GH13,UniRef:UniRef90_Q6GH13;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	1335913	1336635	.	+	.	ID=GCA000160335_01266_gene;locus_tag=GCA000160335_01266;gene=dapB
contig_1	Pyrodigal	CDS	1335913	1336635	.	+	0	ID=GCA000160335_01266;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000160335_01266;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0008839,GO:0009089,GO:0016726,GO:0019877,GO:0050661,GO:0051287;gene=dapB;Parent=GCA000160335_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_000698226.1,SO:0001217,UniParc:UPI00003B1674,UniRef:UniRef100_Q6GH12,UniRef:UniRef50_Q9EZ11,UniRef:UniRef90_Q9EZ11;ec_number=1.17.1.8
contig_1	Pyrodigal	gene	1336662	1337381	.	+	.	ID=GCA000160335_01267_gene;locus_tag=GCA000160335_01267;gene=dapD
contig_1	Pyrodigal	CDS	1336662	1337381	.	+	0	ID=GCA000160335_01267;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;locus_tag=GCA000160335_01267;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;Dbxref=GO:0009089,GO:0019877,GO:0047200;gene=dapD;Parent=GCA000160335_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2171,COG:E,KEGG:K05822,RefSeq:WP_000249839.1,SO:0001217,UniParc:UPI00000549C1,UniRef:UniRef100_Q2FYN7,UniRef:UniRef50_A8F8L8,UniRef:UniRef90_Q2FYN7;ec_number=2.3.1.89
contig_1	Pyrodigal	gene	1337524	1338675	.	+	.	ID=GCA000160335_01268_gene;locus_tag=GCA000160335_01268;gene=abgB
contig_1	Pyrodigal	CDS	1337524	1338675	.	+	0	ID=GCA000160335_01268;Name=putative hydrolase SAS1339;locus_tag=GCA000160335_01268;product=putative hydrolase SAS1339;Dbxref=GO:0016787;gene=abgB;Parent=GCA000160335_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001003794.1,SO:0001217,UniParc:UPI00019F4E4F,UniRef:UniRef100_A0A7Z7W1K1,UniRef:UniRef50_Q2FYN6,UniRef:UniRef90_Q2FYN6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1338680	1339765	.	+	.	ID=GCA000160335_01269_gene;locus_tag=GCA000160335_01269;gene=alr2
contig_1	Pyrodigal	CDS	1338680	1339765	.	+	0	ID=GCA000160335_01269;Name=Alanine racemase 2;locus_tag=GCA000160335_01269;product=Alanine racemase 2;Dbxref=GO:0005829,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr2;Parent=GCA000160335_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_000127596.1,SO:0001217,UniParc:UPI00003B1677,UniRef:UniRef100_A0A7Z7W2S7,UniRef:UniRef50_Q9EZ08,UniRef:UniRef90_Q9EZ08;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	1339755	1341020	.	+	.	ID=GCA000160335_01270_gene;locus_tag=GCA000160335_01270;gene=lysA
contig_1	Pyrodigal	CDS	1339755	1341020	.	+	0	ID=GCA000160335_01270;Name=diaminopimelate decarboxylase;locus_tag=GCA000160335_01270;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0030170,GO:0046677;gene=lysA;Parent=GCA000160335_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_000216956.1,SO:0001217,UniParc:UPI00003B1678,UniRef:UniRef100_A0A0E1X7D7,UniRef:UniRef50_Q5HG20,UniRef:UniRef90_Q5HG20;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	1341256	1341657	.	-	.	ID=GCA000160335_01271_gene;locus_tag=GCA000160335_01271;gene=msaC
contig_1	Pyrodigal	CDS	1341256	1341657	.	-	0	ID=GCA000160335_01271;Name=sarA expression modulator MsaC;locus_tag=GCA000160335_01271;product=sarA expression modulator MsaC;Dbxref=GO:0005886;gene=msaC;Parent=GCA000160335_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876201,RefSeq:WP_000876206.1,SO:0001217,UniParc:UPI00003B1679,UniRef:UniRef100_Q6GH07,UniRef:UniRef50_Q2FYN3,UniRef:UniRef90_Q2FYN3
contig_1	Pyrodigal	gene	1341854	1342054	.	-	.	ID=GCA000160335_01272_gene;locus_tag=GCA000160335_01272;gene=cspA
contig_1	Pyrodigal	CDS	1341854	1342054	.	-	0	ID=GCA000160335_01272;Name=cold shock protein CspA;locus_tag=GCA000160335_01272;product=cold shock protein CspA;Dbxref=GO:0003676,GO:0005737;gene=cspA;Parent=GCA000160335_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000809131,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_000809131.1,SO:0001217,UniParc:UPI00000D7888,UniRef:UniRef100_Q2FYN2,UniRef:UniRef50_P42016,UniRef:UniRef90_Q2FYN2
contig_1	Pyrodigal	gene	1342225	1342533	.	-	.	ID=GCA000160335_01273_gene;locus_tag=GCA000160335_01273;gene=msaA
contig_1	Pyrodigal	CDS	1342225	1342533	.	-	0	ID=GCA000160335_01273;Name=regulatory protein MsaA;locus_tag=GCA000160335_01273;product=regulatory protein MsaA;gene=msaA;Parent=GCA000160335_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000269923,COG:COG4699,COG:S,RefSeq:WP_000269923.1,SO:0001217,UniParc:UPI0000054A76,UniRef:UniRef100_Q2FYN0,UniRef:UniRef50_Q2FYN0,UniRef:UniRef90_Q2FYN0
contig_1	Pyrodigal	gene	1342695	1342964	.	+	.	ID=GCA000160335_01274_gene;locus_tag=GCA000160335_01274;gene=acyP
contig_1	Pyrodigal	CDS	1342695	1342964	.	+	0	ID=GCA000160335_01274;Name=acylphosphatase;locus_tag=GCA000160335_01274;product=acylphosphatase;Dbxref=GO:0003998,GO:0008270,GO:0016743,GO:0051604;gene=acyP;Parent=GCA000160335_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1254,RefSeq:WP_001215907.1,SO:0001217,UniParc:UPI00000D7703,UniRef:UniRef100_Q2FYM9,UniRef:UniRef50_Q4L6A9,UniRef:UniRef90_Q2FYM9;ec_number=3.6.1.7
contig_1	Pyrodigal	gene	1342989	1343612	.	+	.	ID=GCA000160335_01275_gene;locus_tag=GCA000160335_01275;gene=xpaC
contig_1	Pyrodigal	CDS	1342989	1343612	.	+	0	ID=GCA000160335_01275;Name=5-bromo-4-chloroindolyl phosphate hydrolase;locus_tag=GCA000160335_01275;product=5-bromo-4-chloroindolyl phosphate hydrolase;gene=xpaC;Parent=GCA000160335_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4915,COG:QR,SO:0001217,UniParc:UPI00003B167A,UniRef:UniRef100_A0A7Z7QZ63,UniRef:UniRef50_K9AM25,UniRef:UniRef90_Q2FYM8
contig_1	Pyrodigal	gene	1343644	1344780	.	+	.	ID=GCA000160335_01276_gene;locus_tag=GCA000160335_01276;gene=yaaN
contig_1	Pyrodigal	CDS	1343644	1344780	.	+	0	ID=GCA000160335_01276;Name=TelA-like protein MW1294;locus_tag=GCA000160335_01276;product=TelA-like protein MW1294;gene=yaaN;Parent=GCA000160335_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3853,COG:V,RefSeq:WP_000138413.1,SO:0001217,UniParc:UPI00003B167B,UniRef:UniRef100_Q2FYM7,UniRef:UniRef50_Q49XK7,UniRef:UniRef90_Q2FYM7
contig_1	Pyrodigal	gene	1344848	1346191	.	-	.	ID=GCA000160335_01277_gene;locus_tag=GCA000160335_01277;gene=brnQ
contig_1	Pyrodigal	CDS	1344848	1346191	.	-	0	ID=GCA000160335_01277;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000160335_01277;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015658,GO:0015803,GO:0015818,GO:0015820,GO:0016020;gene=brnQ;Parent=GCA000160335_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_001039269.1,SO:0001217,UniParc:UPI00019CD5B0,UniRef:UniRef100_A0A7Z7QZE7,UniRef:UniRef50_Q2FYM4,UniRef:UniRef90_Q2FYM4
contig_1	Pyrodigal	gene	1346416	1348302	.	-	.	ID=GCA000160335_01278_gene;locus_tag=GCA000160335_01278;gene=norD
contig_1	Pyrodigal	CDS	1346416	1348302	.	-	0	ID=GCA000160335_01278;Name=Nitric oxide reductase activation protein NorD;locus_tag=GCA000160335_01278;product=Nitric oxide reductase activation protein NorD;gene=norD;Parent=GCA000160335_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4548,COG:P,RefSeq:WP_001283668.1,SO:0001217,UniParc:UPI00003B167D,UniRef:UniRef100_A0A7Z7W1K8,UniRef:UniRef50_A0A380G8L3,UniRef:UniRef90_A0A5N5IGR7
contig_1	Pyrodigal	gene	1348316	1349107	.	-	.	ID=GCA000160335_01279_gene;locus_tag=GCA000160335_01279;gene=mMP0363
contig_1	Pyrodigal	CDS	1348316	1349107	.	-	0	ID=GCA000160335_01279;Name=putative protein SAOUHSC_01413;locus_tag=GCA000160335_01279;product=putative protein SAOUHSC_01413;Dbxref=GO:0005524,GO:0016887;gene=mMP0363;Parent=GCA000160335_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_001185421.1,SO:0001217,UniParc:UPI0000054A6B,UniRef:UniRef100_Q2G2J8,UniRef:UniRef50_Q49XL1,UniRef:UniRef90_Q2G2J8
contig_1	Pyrodigal	gene	1349288	1349491	.	-	.	ID=GCA000160335_01280_gene;locus_tag=GCA000160335_01280
contig_1	Pyrodigal	CDS	1349288	1349491	.	-	0	ID=GCA000160335_01280;Name=Phage protein;locus_tag=GCA000160335_01280;product=Phage protein;Parent=GCA000160335_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902175.1,SO:0001217,UniParc:UPI0000054A6A,UniRef:UniRef100_Q2G2J7,UniRef:UniRef50_Q2G2J7,UniRef:UniRef90_Q2G2J7
contig_1	Pyrodigal	gene	1349519	1350328	.	-	.	ID=GCA000160335_01281_gene;locus_tag=GCA000160335_01281
contig_1	Pyrodigal	CDS	1349519	1350328	.	-	0	ID=GCA000160335_01281;Name=VOC domain-containing protein;locus_tag=GCA000160335_01281;product=VOC domain-containing protein;Parent=GCA000160335_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000334506.1,SO:0001217,UniParc:UPI00003B167E,UniRef:UniRef100_A0A0E1X5N8,UniRef:UniRef50_A0A6N3AGB1,UniRef:UniRef90_Q2FYM3
contig_1	Pyrodigal	gene	1350918	1352189	.	-	.	ID=GCA000160335_01282_gene;locus_tag=GCA000160335_01282;gene=sucB
contig_1	Pyrodigal	CDS	1350918	1352189	.	-	0	ID=GCA000160335_01282;Name=dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000160335_01282;product=dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0005829,GO:0006099,GO:0033512,GO:0045252;gene=sucB;Parent=GCA000160335_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_001115431.1,SO:0001217,UniParc:UPI00003B167F,UniRef:UniRef100_Q6GGZ6,UniRef:UniRef50_Q2FYM2,UniRef:UniRef90_Q2FYM2;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	1352203	1355001	.	-	.	ID=GCA000160335_01283_gene;locus_tag=GCA000160335_01283;gene=odhA
contig_1	Pyrodigal	CDS	1352203	1355001	.	-	0	ID=GCA000160335_01283;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000160335_01283;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0005829,GO:0006096,GO:0006099,GO:0030976,GO:0045252;gene=odhA;Parent=GCA000160335_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_000180659.1,SO:0001217,UniParc:UPI00003B1680,UniRef:UniRef100_Q6GGZ5,UniRef:UniRef50_P0C601,UniRef:UniRef90_P0C601;ec_number=1.2.4.2
contig_1	Infernal	gene	1355207	1355417	.	+	.	ID=GCA000160335_01284_gene;locus_tag=GCA000160335_01284;gene=S35
contig_1	Infernal	ncRNA	1355207	1355417	1.4e-18	+	.	ID=GCA000160335_01284;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01284;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01284_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1355475	1356830	.	-	.	ID=GCA000160335_01285_gene;locus_tag=GCA000160335_01285;gene=arlS
contig_1	Pyrodigal	CDS	1355475	1356830	.	-	0	ID=GCA000160335_01285;Name=sensor histidine kinase ArlS;locus_tag=GCA000160335_01285;product=sensor histidine kinase ArlS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=arlS;Parent=GCA000160335_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166801,COG:COG5002,COG:T,KEGG:K18940,RefSeq:WP_000166793.1,SO:0001217,UniParc:UPI00003B1681,UniRef:UniRef100_Q6GGZ4,UniRef:UniRef50_Q9KJN3,UniRef:UniRef90_Q9KJN3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1356827	1357486	.	-	.	ID=GCA000160335_01286_gene;locus_tag=GCA000160335_01286;gene=arlR
contig_1	Pyrodigal	CDS	1356827	1357486	.	-	0	ID=GCA000160335_01286;Name=response regulator transcription factor ArlR;locus_tag=GCA000160335_01286;product=response regulator transcription factor ArlR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=arlR;Parent=GCA000160335_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000192137,KEGG:K18941,RefSeq:WP_000192137.1,SO:0001217,UniParc:UPI000002E8B9,UniRef:UniRef100_Q9KJN4,UniRef:UniRef50_Q9KJN4,UniRef:UniRef90_Q9KJN4
contig_1	Pyrodigal	gene	1357956	1358156	.	-	.	ID=GCA000160335_01287_gene;locus_tag=GCA000160335_01287
contig_1	Pyrodigal	CDS	1357956	1358156	.	-	0	ID=GCA000160335_01287;Name=Transposase;locus_tag=GCA000160335_01287;product=Transposase;Parent=GCA000160335_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184337.1,SO:0001217,UniParc:UPI00019F4E37,UniRef:UniRef100_A0A7Z7QYW6,UniRef:UniRef50_Q2FYL7,UniRef:UniRef90_Q2FYL7
contig_1	Infernal	gene	1358079	1358259	.	+	.	ID=GCA000160335_01288_gene;locus_tag=GCA000160335_01288;gene=tsr25
contig_1	Infernal	ncRNA	1358079	1358259	3.3e-37	+	.	ID=GCA000160335_01288;Name=S. aureus tsr25 small RNA;locus_tag=GCA000160335_01288;product=S. aureus tsr25 small RNA;Dbxref=RFAM:RF02578;Parent=GCA000160335_01288_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02578
contig_1	Pyrodigal	gene	1358273	1358887	.	-	.	ID=GCA000160335_01289_gene;locus_tag=GCA000160335_01289;gene=pgpB
contig_1	Pyrodigal	CDS	1358273	1358887	.	-	0	ID=GCA000160335_01289;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000160335_01289;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000160335_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000084775.1,SO:0001217,UniParc:UPI00003B1683,UniRef:UniRef100_A0A7Z7QZ72,UniRef:UniRef50_Q2FYL6,UniRef:UniRef90_Q2FYL6
contig_1	Pyrodigal	gene	1358904	1359974	.	-	.	ID=GCA000160335_01290_gene;locus_tag=GCA000160335_01290;gene=murG
contig_1	Pyrodigal	CDS	1358904	1359974	.	-	0	ID=GCA000160335_01290;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000160335_01290;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000160335_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_000160914.1,SO:0001217,UniParc:UPI00003B1684,UniRef:UniRef100_Q6GGZ0,UniRef:UniRef50_Q2FYL5,UniRef:UniRef90_Q2FYL5;ec_number=2.4.1.227
contig_1	Infernal	gene	1359272	1359446	.	+	.	ID=GCA000160335_01291_gene;locus_tag=GCA000160335_01291;gene=S414
contig_1	Infernal	ncRNA	1359272	1359446	5.3e-25	+	.	ID=GCA000160335_01291;Name=Staphylococcus sRNA 414;locus_tag=GCA000160335_01291;product=Staphylococcus sRNA 414;Dbxref=RFAM:RF02895;Parent=GCA000160335_01291_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02895
contig_1	Pyrodigal	gene	1359986	1360495	.	-	.	ID=GCA000160335_01292_gene;locus_tag=GCA000160335_01292;gene=rimL
contig_1	Pyrodigal	CDS	1359986	1360495	.	-	0	ID=GCA000160335_01292;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_01292;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000160335_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000620191.1,SO:0001217,UniParc:UPI00003B1685,UniRef:UniRef100_A0A7Z7QZJ1,UniRef:UniRef50_Q2FYL4,UniRef:UniRef90_Q2FYL4
contig_1	Pyrodigal	gene	1360896	1362386	.	-	.	ID=GCA000160335_01293_gene;locus_tag=GCA000160335_01293;gene=ctpA
contig_1	Pyrodigal	CDS	1360896	1362386	.	-	0	ID=GCA000160335_01293;Name=putative CtpA-like serine protease;locus_tag=GCA000160335_01293;product=putative CtpA-like serine protease;Dbxref=GO:0004175,GO:0005886,GO:0006508,GO:0007165,GO:0008236,GO:0030288;gene=ctpA;Parent=GCA000160335_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_000342154.1,SO:0001217,UniParc:UPI00003B1686,UniRef:UniRef100_Q6GGY8,UniRef:UniRef50_Q4L6D0,UniRef:UniRef90_Q99U67;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1362625	1363572	.	+	.	ID=GCA000160335_01294_gene;locus_tag=GCA000160335_01294;gene=tnp
contig_1	Pyrodigal	CDS	1362625	1363572	.	+	0	ID=GCA000160335_01294;Name=IS30 family ISSau1 transposase;locus_tag=GCA000160335_01294;product=IS30 family ISSau1 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau1,RefSeq:WP_000121211.1,SO:0001217,UniParc:UPI00001833E5,UniRef:UniRef100_Q9MBM9,UniRef:UniRef50_A7GQY4,UniRef:UniRef90_Q599I4
contig_1	Pyrodigal	gene	1363645	1363866	.	-	.	ID=GCA000160335_01295_gene;locus_tag=GCA000160335_01295;gene=yozE
contig_1	Pyrodigal	CDS	1363645	1363866	.	-	0	ID=GCA000160335_01295;Name=UPF0346 protein SaurJH9_1481;locus_tag=GCA000160335_01295;product=UPF0346 protein SaurJH9_1481;gene=yozE;Parent=GCA000160335_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4479,COG:S,RefSeq:WP_000801007.1,SO:0001217,UniParc:UPI0000054A60,UniRef:UniRef100_Q2FYL1,UniRef:UniRef50_Q2FYL1,UniRef:UniRef90_Q2FYL1
contig_1	Pyrodigal	gene	1363866	1364366	.	-	.	ID=GCA000160335_01296_gene;locus_tag=GCA000160335_01296;gene=crr
contig_1	Pyrodigal	CDS	1363866	1364366	.	-	0	ID=GCA000160335_01296;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000160335_01296;product=PTS system glucose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0046872;gene=crr;Parent=GCA000160335_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_000473654.1,SO:0001217,UniParc:UPI00003B1687,UniRef:UniRef100_Q6GGY5,UniRef:UniRef50_Q81JY0,UniRef:UniRef90_P60856
contig_1	Pyrodigal	gene	1364378	1364806	.	-	.	ID=GCA000160335_01297_gene;locus_tag=GCA000160335_01297;gene=msrB
contig_1	Pyrodigal	CDS	1364378	1364806	.	-	0	ID=GCA000160335_01297;Name=Peptide methionine sulfoxide reductase MsrB;locus_tag=GCA000160335_01297;product=Peptide methionine sulfoxide reductase MsrB;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0033743;gene=msrB;Parent=GCA000160335_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,RefSeq:WP_000913317.1,SO:0001217,UniParc:UPI000012F67F,UniRef:UniRef100_P65451,UniRef:UniRef50_P0A088,UniRef:UniRef90_P0A088;ec_number=1.8.4.12
contig_1	Pyrodigal	gene	1364799	1365332	.	-	.	ID=GCA000160335_01298_gene;locus_tag=GCA000160335_01298;gene=msrA2
contig_1	Pyrodigal	CDS	1364799	1365332	.	-	0	ID=GCA000160335_01298;Name=Peptide methionine sulfoxide reductase MsrA 2;locus_tag=GCA000160335_01298;product=Peptide methionine sulfoxide reductase MsrA 2;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA2;Parent=GCA000160335_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159899.1,SO:0001217,UniParc:UPI00003B1688,UniRef:UniRef100_Q6GGY3,UniRef:UniRef50_P0A086,UniRef:UniRef90_P0A086;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1365418	1366257	.	-	.	ID=GCA000160335_01299_gene;locus_tag=GCA000160335_01299;gene=fakB2
contig_1	Pyrodigal	CDS	1365418	1366257	.	-	0	ID=GCA000160335_01299;Name=fatty acid kinase binding subunit FakB2;locus_tag=GCA000160335_01299;product=fatty acid kinase binding subunit FakB2;Dbxref=GO:0008289;gene=fakB2;Parent=GCA000160335_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166059,COG:COG1307,COG:I,RefSeq:WP_000166055.1,SO:0001217,UniParc:UPI00003B1689,UniRef:UniRef100_Q6GGY2,UniRef:UniRef50_Q8NWR0,UniRef:UniRef90_Q8NWR0
contig_1	Pyrodigal	gene	1366272	1366751	.	-	.	ID=GCA000160335_01300_gene;locus_tag=GCA000160335_01300;gene=folA
contig_1	Pyrodigal	CDS	1366272	1366751	.	-	0	ID=GCA000160335_01300;Name=Dihydrofolate reductase;locus_tag=GCA000160335_01300;product=Dihydrofolate reductase;Dbxref=GO:0004146,GO:0005829,GO:0006730,GO:0046452,GO:0046654,GO:0046655,GO:0050661;gene=folA;Parent=GCA000160335_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,RefSeq:WP_000175755.1,SO:0001217,UniParc:UPI0001B7028D,UniRef:UniRef100_UPI0001B7028D,UniRef:UniRef50_Q5HFZ7,UniRef:UniRef90_Q5HFZ7;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	1366951	1367907	.	-	.	ID=GCA000160335_01301_gene;locus_tag=GCA000160335_01301;gene=thyA
contig_1	Pyrodigal	CDS	1366951	1367907	.	-	0	ID=GCA000160335_01301;Name=thymidylate synthase;locus_tag=GCA000160335_01301;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259;gene=thyA;Parent=GCA000160335_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_000934885.1,SO:0001217,UniParc:UPI00003B168A,UniRef:UniRef100_Q2FYK5,UniRef:UniRef50_P00469,UniRef:UniRef90_P67046;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	1368327	1368764	.	-	.	ID=GCA000160335_01302_gene;locus_tag=GCA000160335_01302
contig_1	Pyrodigal	CDS	1368327	1368764	.	-	0	ID=GCA000160335_01302;Name=Bacilliredoxin SAV1428;locus_tag=GCA000160335_01302;product=Bacilliredoxin SAV1428;Dbxref=GO:0045454;Parent=GCA000160335_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000995290.1,SO:0001217,UniParc:UPI00003B168B,UniRef:UniRef100_Q6GGX9,UniRef:UniRef50_Q2FYK4,UniRef:UniRef90_Q2FYK4
contig_1	Pyrodigal	gene	1368780	1369904	.	-	.	ID=GCA000160335_01303_gene;locus_tag=GCA000160335_01303;gene=cvfC
contig_1	Pyrodigal	CDS	1368780	1369904	.	-	0	ID=GCA000160335_01303;Name=Conserved virulence factor C;locus_tag=GCA000160335_01303;product=Conserved virulence factor C;Dbxref=GO:0016491;gene=cvfC;Parent=GCA000160335_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000404628.1,SO:0001217,UniParc:UPI00003B168C,UniRef:UniRef100_Q6GGX8,UniRef:UniRef50_Q2FYK3,UniRef:UniRef90_Q2FH09
contig_1	Pyrodigal	gene	1369942	1370193	.	-	.	ID=GCA000160335_01304_gene;locus_tag=GCA000160335_01304
contig_1	Pyrodigal	CDS	1369942	1370193	.	-	0	ID=GCA000160335_01304;Name=PBS lyase HEAT-like repeat protein;locus_tag=GCA000160335_01304;product=PBS lyase HEAT-like repeat protein;Parent=GCA000160335_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165814.1,SO:0001217,UniParc:UPI00003B168D,UniRef:UniRef100_A0A7Z7QZ83,UniRef:UniRef50_A0A0U1E823,UniRef:UniRef90_A0A077UK56
contig_1	Pyrodigal	gene	1370644	1371348	.	+	.	ID=GCA000160335_01305_gene;locus_tag=GCA000160335_01305;gene=yhhQ
contig_1	Pyrodigal	CDS	1370644	1371348	.	+	0	ID=GCA000160335_01305;Name=queuosine precursor transporter;locus_tag=GCA000160335_01305;product=queuosine precursor transporter;Dbxref=GO:1990397;gene=yhhQ;Parent=GCA000160335_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,RefSeq:WP_000282169.1,SO:0001217,UniParc:UPI00003B168F,UniRef:UniRef100_A0A7Z7QYN5,UniRef:UniRef50_A0A380CFB3,UniRef:UniRef90_A0A0U1MKY9
contig_1	Pyrodigal	gene	1371589	1371990	.	+	.	ID=GCA000160335_01306_gene;locus_tag=GCA000160335_01306;gene=rnhA
contig_1	Pyrodigal	CDS	1371589	1371990	.	+	0	ID=GCA000160335_01306;Name=RNase H type-1 domain-containing protein;locus_tag=GCA000160335_01306;product=RNase H type-1 domain-containing protein;gene=rnhA;Parent=GCA000160335_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,RefSeq:WP_001062938.1,SO:0001217,UniParc:UPI00003B1690,UniRef:UniRef100_A0A7Z7QZK2,UniRef:UniRef50_Q2FYJ7,UniRef:UniRef90_Q2FYJ7
contig_1	Pyrodigal	gene	1372049	1392568	.	-	.	ID=GCA000160335_01307_gene;locus_tag=GCA000160335_01307
contig_1	Pyrodigal	CDS	1372049	1392568	.	-	0	ID=GCA000160335_01307;Name=DUF1542 domain-containing protein;locus_tag=GCA000160335_01307;product=DUF1542 domain-containing protein;Parent=GCA000160335_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q931R6,UniRef:UniRef90_UPI00223C7BBB
contig_1	Pyrodigal	gene	1392698	1403680	.	-	.	ID=GCA000160335_01308_gene;locus_tag=GCA000160335_01308
contig_1	Pyrodigal	CDS	1392698	1403680	.	-	0	ID=GCA000160335_01308;Name=Erythrocyte membrane binding protein;locus_tag=GCA000160335_01308;product=Erythrocyte membrane binding protein;Parent=GCA000160335_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A9N8IGR9,UniRef:UniRef90_A0A2X2JWA4
contig_1	Pyrodigal	gene	1404081	1405472	.	-	.	ID=GCA000160335_01309_gene;locus_tag=GCA000160335_01309;gene=norB
contig_1	Pyrodigal	CDS	1404081	1405472	.	-	0	ID=GCA000160335_01309;Name=multidrug efflux MFS transporter NorB;locus_tag=GCA000160335_01309;product=multidrug efflux MFS transporter NorB;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=norB;Parent=GCA000160335_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000414682,COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000414703.1,SO:0001217,UniParc:UPI00003B1691,UniRef:UniRef100_Q6GGX2,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q2FYJ5
contig_1	Pyrodigal	gene	1405629	1406951	.	-	.	ID=GCA000160335_01310_gene;locus_tag=GCA000160335_01310;gene=potE
contig_1	Pyrodigal	CDS	1405629	1406951	.	-	0	ID=GCA000160335_01310;Name=Amino acid permease;locus_tag=GCA000160335_01310;product=Amino acid permease;gene=potE;Parent=GCA000160335_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000064778.1,SO:0001217,UniParc:UPI0000054A4A,UniRef:UniRef100_Q2FYJ4,UniRef:UniRef50_Q2FYJ4,UniRef:UniRef90_Q2FYJ4
contig_1	Pyrodigal	gene	1406982	1408022	.	-	.	ID=GCA000160335_01311_gene;locus_tag=GCA000160335_01311;gene=tdcB
contig_1	Pyrodigal	CDS	1406982	1408022	.	-	0	ID=GCA000160335_01311;Name=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;locus_tag=GCA000160335_01311;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;Dbxref=GO:0000166,GO:0003941,GO:0004794,GO:0006565,GO:0006567,GO:0009097,GO:0030170,GO:0070689;gene=tdcB;Parent=GCA000160335_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000210828.1,SO:0001217,UniParc:UPI0000054A49,UniRef:UniRef100_Q2FYJ3,UniRef:UniRef50_P0AGF6,UniRef:UniRef90_Q2FYJ3;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	1408117	1409235	.	-	.	ID=GCA000160335_01312_gene;locus_tag=GCA000160335_01312;gene=ald
contig_1	Pyrodigal	CDS	1408117	1409235	.	-	0	ID=GCA000160335_01312;Name=alanine dehydrogenase;locus_tag=GCA000160335_01312;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000160335_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000959426.1,SO:0001217,UniParc:UPI00003B1692,UniRef:UniRef100_Q6GGW9,UniRef:UniRef50_Q2FYJ2,UniRef:UniRef90_Q2FYJ2;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1409710	1410588	.	-	.	ID=GCA000160335_01313_gene;locus_tag=GCA000160335_01313;gene=exoIX
contig_1	Pyrodigal	CDS	1409710	1410588	.	-	0	ID=GCA000160335_01313;Name=5'-3' exonuclease;locus_tag=GCA000160335_01313;product=5'-3' exonuclease;gene=exoIX;Parent=GCA000160335_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0258,COG:L,RefSeq:WP_001133021.1,SO:0001217,UniParc:UPI00000CAC0A,UniRef:UniRef100_A0A7Z7QYY6,UniRef:UniRef50_A0A380G7N4,UniRef:UniRef90_A0A641AB36
contig_1	Pyrodigal	gene	1410608	1414048	.	-	.	ID=GCA000160335_01314_gene;locus_tag=GCA000160335_01314;gene=era
contig_1	Pyrodigal	CDS	1410608	1414048	.	-	0	ID=GCA000160335_01314;Name=Dynamin N-terminal domain-containing protein;locus_tag=GCA000160335_01314;product=Dynamin N-terminal domain-containing protein;gene=era;Parent=GCA000160335_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000608492.1,SO:0001217,UniParc:UPI00019F4E1D,UniRef:UniRef100_UPI00019F4E1D,UniRef:UniRef50_K9B117,UniRef:UniRef90_Q2FYJ0
contig_1	Pyrodigal	gene	1414352	1415692	.	+	.	ID=GCA000160335_01315_gene;locus_tag=GCA000160335_01315;gene=piuB
contig_1	Pyrodigal	CDS	1414352	1415692	.	+	0	ID=GCA000160335_01315;Name=PepSY domain-containing protein;locus_tag=GCA000160335_01315;product=PepSY domain-containing protein;gene=piuB;Parent=GCA000160335_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3182,COG:P,RefSeq:WP_000798995.1,SO:0001217,UniParc:UPI00019F4E1C,UniRef:UniRef100_A0A7Z7QZH2,UniRef:UniRef50_Q2FYI9,UniRef:UniRef90_Q2FYI9
contig_1	Pyrodigal	gene	1416037	1416369	.	-	.	ID=GCA000160335_01316_gene;locus_tag=GCA000160335_01316
contig_1	Pyrodigal	CDS	1416037	1416369	.	-	0	ID=GCA000160335_01316;Name=DUF4889 domain-containing protein;locus_tag=GCA000160335_01316;product=DUF4889 domain-containing protein;Parent=GCA000160335_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000516800.1,SO:0001217,UniParc:UPI0000054A43,UniRef:UniRef100_Q2FYI7,UniRef:UniRef50_Q2FYI7,UniRef:UniRef90_Q2FYI7
contig_1	Pyrodigal	gene	1416453	1417598	.	-	.	ID=GCA000160335_01317_gene;locus_tag=GCA000160335_01317;gene=rlmL
contig_1	Pyrodigal	CDS	1416453	1417598	.	-	0	ID=GCA000160335_01317;Name=THUMP domain-containing protein;locus_tag=GCA000160335_01317;product=THUMP domain-containing protein;gene=rlmL;Parent=GCA000160335_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0116,COG:J,RefSeq:WP_000487150.1,SO:0001217,UniParc:UPI0000054A42,UniRef:UniRef100_Q2FYI6,UniRef:UniRef50_P50840,UniRef:UniRef90_Q2FYI6
contig_1	Infernal	gene	1417807	1418186	.	-	.	ID=GCA000160335_01318_gene;locus_tag=GCA000160335_01318;gene=RNaseP_bact_b
contig_1	Infernal	ncRNA	1417807	1418186	1.2e-35	-	.	ID=GCA000160335_01318;Name=Bacterial RNase P class B;locus_tag=GCA000160335_01318;product=Bacterial RNase P class B;Dbxref=RFAM:RF00011;Parent=GCA000160335_01318_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00011
contig_1	Pyrodigal	gene	1418032	1418148	.	-	.	ID=GCA000160335_01319_gene;locus_tag=GCA000160335_01319
contig_1	Pyrodigal	CDS	1418032	1418148	.	-	0	ID=GCA000160335_01319;Name=hypothetical protein;locus_tag=GCA000160335_01319;product=hypothetical protein;Parent=GCA000160335_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D78B8,UniRef:UniRef100_A0A0M5N980,UniRef:UniRef50_A0A0M5N980,UniRef:UniRef90_A0A0M5N980
contig_1	Pyrodigal	gene	1418249	1418593	.	-	.	ID=GCA000160335_01320_gene;locus_tag=GCA000160335_01320;gene=gpsB
contig_1	Pyrodigal	CDS	1418249	1418593	.	-	0	ID=GCA000160335_01320;Name=cell division regulator GpsB;locus_tag=GCA000160335_01320;product=cell division regulator GpsB;Dbxref=GO:0005737,GO:0008360,GO:0051301;gene=gpsB;Parent=GCA000160335_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001286320.1,SO:0001217,UniParc:UPI0000054A3F,UniRef:UniRef100_Q2FYI5,UniRef:UniRef50_Q2FYI5,UniRef:UniRef90_Q2FYI5
contig_1	Pyrodigal	gene	1418607	1419170	.	-	.	ID=GCA000160335_01321_gene;locus_tag=GCA000160335_01321;gene=yoqJ
contig_1	Pyrodigal	CDS	1418607	1419170	.	-	0	ID=GCA000160335_01321;Name=UPF0398 protein SaurJH1_1535;locus_tag=GCA000160335_01321;product=UPF0398 protein SaurJH1_1535;gene=yoqJ;Parent=GCA000160335_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4474,COG:X,RefSeq:WP_000241308.1,SO:0001217,UniParc:UPI00000D78A2,UniRef:UniRef100_Q2FYI4,UniRef:UniRef50_Q2FYI4,UniRef:UniRef90_Q2FYI4
contig_1	Pyrodigal	gene	1419163	1419564	.	-	.	ID=GCA000160335_01322_gene;locus_tag=GCA000160335_01322
contig_1	Pyrodigal	CDS	1419163	1419564	.	-	0	ID=GCA000160335_01322;Name=DUF1798 domain-containing protein;locus_tag=GCA000160335_01322;product=DUF1798 domain-containing protein;Parent=GCA000160335_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD4F9,UniRef:UniRef100_A0A7Z7W2V5,UniRef:UniRef50_Q2FYI3,UniRef:UniRef90_Q2FYI3
contig_1	Pyrodigal	gene	1420052	1420678	.	+	.	ID=GCA000160335_01323_gene;locus_tag=GCA000160335_01323;gene=recU
contig_1	Pyrodigal	CDS	1420052	1420678	.	+	0	ID=GCA000160335_01323;Name=Holliday junction resolvase RecU;locus_tag=GCA000160335_01323;product=Holliday junction resolvase RecU;Dbxref=GO:0000287,GO:0003676,GO:0004519,GO:0005737,GO:0006281,GO:0006310,GO:0007059;gene=recU;Parent=GCA000160335_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3331,COG:R,RefSeq:WP_001108885.1,SO:0001217,UniParc:UPI00003B1697,UniRef:UniRef100_Q6GGW0,UniRef:UniRef50_Q8GN53,UniRef:UniRef90_Q8GN53;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1420675	1422825	.	+	.	ID=GCA000160335_01324_gene;locus_tag=GCA000160335_01324;gene=mrcB
contig_1	Pyrodigal	CDS	1420675	1422825	.	+	0	ID=GCA000160335_01324;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000160335_01324;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000160335_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,RefSeq:WP_000138342.1,SO:0001217,UniParc:UPI00000B2CEA,UniRef:UniRef100_A0A181K8D6,UniRef:UniRef50_F4NA87,UniRef:UniRef90_F4NA87
contig_1	Pyrodigal	gene	1423375	1423716	.	-	.	ID=GCA000160335_01325_gene;locus_tag=GCA000160335_01325
contig_1	Pyrodigal	CDS	1423375	1423716	.	-	0	ID=GCA000160335_01325;Name=YpoC-like domain-containing protein;locus_tag=GCA000160335_01325;product=YpoC-like domain-containing protein;Parent=GCA000160335_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182035.1,SO:0001217,UniParc:UPI00003B1699,UniRef:UniRef100_A0A0E1XFX3,UniRef:UniRef50_A0A143PAF6,UniRef:UniRef90_Q2FYH9
contig_1	Pyrodigal	gene	1423721	1424380	.	-	.	ID=GCA000160335_01326_gene;locus_tag=GCA000160335_01326;gene=nth
contig_1	Pyrodigal	CDS	1423721	1424380	.	-	0	ID=GCA000160335_01326;Name=endonuclease III;locus_tag=GCA000160335_01326;product=endonuclease III;Dbxref=GO:0006281,GO:0140078;gene=nth;Parent=GCA000160335_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_000253765.1,SO:0001217,UniParc:UPI00000D7789,UniRef:UniRef100_Q2FYH8,UniRef:UniRef50_A0A024P153,UniRef:UniRef90_A0A7X9ZHC0;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1424370	1425056	.	-	.	ID=GCA000160335_01327_gene;locus_tag=GCA000160335_01327;gene=dnaD
contig_1	Pyrodigal	CDS	1424370	1425056	.	-	0	ID=GCA000160335_01327;Name=Chromosome replication initiation protein dnaD;locus_tag=GCA000160335_01327;product=Chromosome replication initiation protein dnaD;gene=dnaD;Parent=GCA000160335_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3935,COG:L,RefSeq:WP_000362222.1,SO:0001217,UniParc:UPI00003B169A,UniRef:UniRef100_A0A7Z7QYT3,UniRef:UniRef50_A0A2T4RL44,UniRef:UniRef90_A0A2W2X8C3
contig_1	Pyrodigal	gene	1425385	1426677	.	-	.	ID=GCA000160335_01328_gene;locus_tag=GCA000160335_01328;gene=asnS
contig_1	Pyrodigal	CDS	1425385	1426677	.	-	0	ID=GCA000160335_01328;Name=asparagine--tRNA ligase;locus_tag=GCA000160335_01328;product=asparagine--tRNA ligase;Dbxref=GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421,GO:0016740;gene=asnS;Parent=GCA000160335_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_000858795.1,SO:0001217,UniParc:UPI00003B169B,UniRef:UniRef100_Q6GGV5,UniRef:UniRef50_P54262,UniRef:UniRef90_Q2FYH6;ec_number=6.1.1.22
contig_1	Pyrodigal	gene	1426999	1429692	.	-	.	ID=GCA000160335_01329_gene;locus_tag=GCA000160335_01329;gene=dinG
contig_1	Pyrodigal	CDS	1426999	1429692	.	-	0	ID=GCA000160335_01329;Name=3'-5' exonuclease DinG;locus_tag=GCA000160335_01329;product=3'-5' exonuclease DinG;Dbxref=GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0005829,GO:0008408,GO:0016818,GO:0045004;gene=dinG;Parent=GCA000160335_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2176,COG:L,KEGG:K03722,RefSeq:WP_000525060.1,SO:0001217,UniParc:UPI00003B169C,UniRef:UniRef100_Q6GGV4,UniRef:UniRef50_Q6GGV4,UniRef:UniRef90_Q6GGV4;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1429716	1430687	.	-	.	ID=GCA000160335_01330_gene;locus_tag=GCA000160335_01330;gene=birA
contig_1	Pyrodigal	CDS	1429716	1430687	.	-	0	ID=GCA000160335_01330;Name=Bifunctional ligase/repressor BirA;locus_tag=GCA000160335_01330;product=Bifunctional ligase/repressor BirA;gene=birA;Parent=GCA000160335_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1654,COG:K,KEGG:K03524,RefSeq:WP_000049917.1,SO:0001217,UniParc:UPI00003B169D,UniRef:UniRef100_A0A7Z7QZM3,UniRef:UniRef50_A0A2K4AIL1,UniRef:UniRef90_A0A2K4AIL1;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	1430674	1431876	.	-	.	ID=GCA000160335_01331_gene;locus_tag=GCA000160335_01331;gene=cca
contig_1	Pyrodigal	CDS	1430674	1431876	.	-	0	ID=GCA000160335_01331;Name=CCA tRNA nucleotidyltransferase;locus_tag=GCA000160335_01331;product=CCA tRNA nucleotidyltransferase;Dbxref=GO:0000049,GO:0000287,GO:0001680,GO:0005524,GO:0016779,GO:0042245,GO:0160016;gene=cca;Parent=GCA000160335_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,RefSeq:WP_000361536.1,SO:0001217,UniParc:UPI00003B169E,UniRef:UniRef100_Q6GGV2,UniRef:UniRef50_Q49XR3,UniRef:UniRef90_Q99U32;ec_number=2.7.7.72
contig_1	Pyrodigal	gene	1431881	1433023	.	-	.	ID=GCA000160335_01332_gene;locus_tag=GCA000160335_01332;gene=bshA
contig_1	Pyrodigal	CDS	1431881	1433023	.	-	0	ID=GCA000160335_01332;Name=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;locus_tag=GCA000160335_01332;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;Dbxref=GO:0016757,GO:0071793;gene=bshA;Parent=GCA000160335_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000690024.1,SO:0001217,UniParc:UPI00003B169F,UniRef:UniRef100_A0A0E1X5C4,UniRef:UniRef50_P42982,UniRef:UniRef90_Q2G255
contig_1	Pyrodigal	gene	1433267	1433584	.	-	.	ID=GCA000160335_01333_gene;locus_tag=GCA000160335_01333;gene=mazG
contig_1	Pyrodigal	CDS	1433267	1433584	.	-	0	ID=GCA000160335_01333;Name=NTP pyrophosphohydrolase MazG-like domain-containing protein;locus_tag=GCA000160335_01333;product=NTP pyrophosphohydrolase MazG-like domain-containing protein;gene=mazG;Parent=GCA000160335_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1694,COG:V,RefSeq:WP_000839927.1,SO:0001217,UniParc:UPI00003B16A0,UniRef:UniRef100_A0A0E1X782,UniRef:UniRef50_K8ZP05,UniRef:UniRef90_Q2G254
contig_1	Pyrodigal	gene	1433920	1434618	.	-	.	ID=GCA000160335_01334_gene;locus_tag=GCA000160335_01334;gene=yugP
contig_1	Pyrodigal	CDS	1433920	1434618	.	-	0	ID=GCA000160335_01334;Name=Putative membrane protease YugP;locus_tag=GCA000160335_01334;product=Putative membrane protease YugP;gene=yugP;Parent=GCA000160335_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2738,COG:O,KEGG:K06973,SO:0001217,UniParc:UPI00000CAC92,UniRef:UniRef100_A0A7Z7W209,UniRef:UniRef50_A0A7U7PY90,UniRef:UniRef90_A0A7U7PY90
contig_1	Pyrodigal	gene	1434672	1435259	.	-	.	ID=GCA000160335_01335_gene;locus_tag=GCA000160335_01335;gene=ypjA
contig_1	Pyrodigal	CDS	1434672	1435259	.	-	0	ID=GCA000160335_01335;Name=DUF1405 domain-containing protein;locus_tag=GCA000160335_01335;product=DUF1405 domain-containing protein;gene=ypjA;Parent=GCA000160335_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4347,COG:S,RefSeq:WP_000154479.1,SO:0001217,UniParc:UPI00003B16A1,UniRef:UniRef100_A0A7Z7W1M3,UniRef:UniRef50_Q2FYH4,UniRef:UniRef90_Q2FYH4
contig_1	Pyrodigal	gene	1435249	1435866	.	-	.	ID=GCA000160335_01336_gene;locus_tag=GCA000160335_01336;gene=ypiB
contig_1	Pyrodigal	CDS	1435249	1435866	.	-	0	ID=GCA000160335_01336;Name=UPF0302 protein SA1295;locus_tag=GCA000160335_01336;product=UPF0302 protein SA1295;gene=ypiB;Parent=GCA000160335_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5582,COG:S,SO:0001217,UniParc:UPI00019CD4CD,UniRef:UniRef100_Q6GGU7,UniRef:UniRef50_Q2FYH3,UniRef:UniRef90_Q2FYH3
contig_1	Pyrodigal	gene	1435838	1437082	.	-	.	ID=GCA000160335_01337_gene;locus_tag=GCA000160335_01337;gene=tadD
contig_1	Pyrodigal	CDS	1435838	1437082	.	-	0	ID=GCA000160335_01337;Name=Tetratricopeptide repeat protein;locus_tag=GCA000160335_01337;product=Tetratricopeptide repeat protein;gene=tadD;Parent=GCA000160335_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5010,COG:W,RefSeq:WP_000389521.1,SO:0001217,UniParc:UPI00003B16A3,UniRef:UniRef100_A0A0E1X5B9,UniRef:UniRef50_Q49XR9,UniRef:UniRef90_A0AA40JLE9
contig_1	Pyrodigal	gene	1437089	1438387	.	-	.	ID=GCA000160335_01338_gene;locus_tag=GCA000160335_01338;gene=aroA
contig_1	Pyrodigal	CDS	1437089	1438387	.	-	0	ID=GCA000160335_01338;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000160335_01338;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000160335_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_000245891.1,SO:0001217,UniParc:UPI00003B16A4,UniRef:UniRef100_Q6GGU5,UniRef:UniRef50_Q05615,UniRef:UniRef90_Q05615;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	1438397	1439461	.	-	.	ID=GCA000160335_01339_gene;locus_tag=GCA000160335_01339;gene=aroB
contig_1	Pyrodigal	CDS	1438397	1439461	.	-	0	ID=GCA000160335_01339;Name=3-dehydroquinate synthase;locus_tag=GCA000160335_01339;product=3-dehydroquinate synthase;Dbxref=GO:0000166,GO:0003856,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0046872;gene=aroB;Parent=GCA000160335_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_000776318.1,SO:0001217,UniParc:UPI00003B16A5,UniRef:UniRef100_Q6GGU4,UniRef:UniRef50_Q6GGU4,UniRef:UniRef90_Q6GGU4;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	1439487	1440653	.	-	.	ID=GCA000160335_01340_gene;locus_tag=GCA000160335_01340;gene=aroC
contig_1	Pyrodigal	CDS	1439487	1440653	.	-	0	ID=GCA000160335_01340;Name=chorismate synthase;locus_tag=GCA000160335_01340;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA000160335_01340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_001269937.1,SO:0001217,UniParc:UPI00003B16A6,UniRef:UniRef100_Q6GGU3,UniRef:UniRef50_Q59803,UniRef:UniRef90_Q59803;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	1441122	1441571	.	-	.	ID=GCA000160335_01341_gene;locus_tag=GCA000160335_01341;gene=ndk
contig_1	Pyrodigal	CDS	1441122	1441571	.	-	0	ID=GCA000160335_01341;Name=nucleoside-diphosphate kinase;locus_tag=GCA000160335_01341;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550,GO:0005524,GO:0005737,GO:0006183,GO:0006228,GO:0006241,GO:0046872;gene=ndk;Parent=GCA000160335_01341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_000442480.1,SO:0001217,UniParc:UPI000012FEC6,UniRef:UniRef100_Q2FYG7,UniRef:UniRef50_Q2FYG7,UniRef:UniRef90_Q2FYG7;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	1441663	1442622	.	-	.	ID=GCA000160335_01342_gene;locus_tag=GCA000160335_01342;gene=ispA
contig_1	Pyrodigal	CDS	1441663	1442622	.	-	0	ID=GCA000160335_01342;Name=Farnesyl pyrophosphate synthetase;locus_tag=GCA000160335_01342;product=Farnesyl pyrophosphate synthetase;gene=ispA;Parent=GCA000160335_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,KEGG:K24873,RefSeq:WP_001096481.1,SO:0001217,UniParc:UPI00003B16A7,UniRef:UniRef100_A0A7Z7QZ05,UniRef:UniRef50_A0A0D6HKK2,UniRef:UniRef90_A0A0D6HKK2;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1442624	1443349	.	-	.	ID=GCA000160335_01343_gene;locus_tag=GCA000160335_01343;gene=menG
contig_1	Pyrodigal	CDS	1442624	1443349	.	-	0	ID=GCA000160335_01343;Name=demethylmenaquinone methyltransferase;locus_tag=GCA000160335_01343;product=demethylmenaquinone methyltransferase;Dbxref=GO:0008168,GO:0009234,GO:0032259,GO:0043770;gene=menG;Parent=GCA000160335_01343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000774688.1,SO:0001217,UniParc:UPI00019F4E03,UniRef:UniRef100_A0A7Z7QZB1,UniRef:UniRef50_P31113,UniRef:UniRef90_Q6GGU0;ec_number=2.1.1.163
contig_1	Pyrodigal	gene	1443352	1443924	.	-	.	ID=GCA000160335_01344_gene;locus_tag=GCA000160335_01344
contig_1	Pyrodigal	CDS	1443352	1443924	.	-	0	ID=GCA000160335_01344;Name=Heptaprenyl pyrophosphate synthase subunit A;locus_tag=GCA000160335_01344;product=Heptaprenyl pyrophosphate synthase subunit A;Parent=GCA000160335_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00805,RefSeq:WP_000450555.1,SO:0001217,UniParc:UPI00000D76A6,UniRef:UniRef100_A0A7Z7QYR7,UniRef:UniRef50_Q2FYG4,UniRef:UniRef90_Q2FYG4;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1444355	1444627	.	-	.	ID=GCA000160335_01345_gene;locus_tag=GCA000160335_01345;gene=hup
contig_1	Pyrodigal	CDS	1444355	1444627	.	-	0	ID=GCA000160335_01345;Name=DNA-binding protein HU;locus_tag=GCA000160335_01345;product=DNA-binding protein HU;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hup;Parent=GCA000160335_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_001043863.1,SO:0001217,UniParc:UPI0000054C6E,UniRef:UniRef100_Q5HFV0,UniRef:UniRef50_P0A3H3,UniRef:UniRef90_Q5HFV0
contig_1	Pyrodigal	gene	1444798	1445796	.	-	.	ID=GCA000160335_01346_gene;locus_tag=GCA000160335_01346;gene=gpsA
contig_1	Pyrodigal	CDS	1444798	1445796	.	-	0	ID=GCA000160335_01346;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000160335_01346;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006650,GO:0008654,GO:0009331,GO:0046167,GO:0046168,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000160335_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_000161753.1,SO:0001217,UniParc:UPI00003B16A9,UniRef:UniRef100_Q6GGT7,UniRef:UniRef50_Q5XE03,UniRef:UniRef90_Q2FYG1;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	1445813	1447123	.	-	.	ID=GCA000160335_01347_gene;locus_tag=GCA000160335_01347;gene=der
contig_1	Pyrodigal	CDS	1445813	1447123	.	-	0	ID=GCA000160335_01347;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000160335_01347;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=der;Parent=GCA000160335_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,KEGG:K03977,RefSeq:WP_000165530.1,SO:0001217,UniParc:UPI0000054C70,UniRef:UniRef100_Q2FYG0,UniRef:UniRef50_P50743,UniRef:UniRef90_Q2FYG0;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1447345	1448520	.	-	.	ID=GCA000160335_01348_gene;locus_tag=GCA000160335_01348;gene=rpsA
contig_1	Pyrodigal	CDS	1447345	1448520	.	-	0	ID=GCA000160335_01348;Name=30S ribosomal protein S1;locus_tag=GCA000160335_01348;product=30S ribosomal protein S1;Dbxref=GO:0003676,GO:0003729,GO:0003735,GO:0006412,GO:0022627;gene=rpsA;Parent=GCA000160335_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_000133953.1,SO:0001217,UniParc:UPI00003B16AA,UniRef:UniRef100_Q6GGT5,UniRef:UniRef50_Q49XT0,UniRef:UniRef90_Q6GGT5
contig_1	Pyrodigal	gene	1449232	1449891	.	-	.	ID=GCA000160335_01349_gene;locus_tag=GCA000160335_01349;gene=cmk
contig_1	Pyrodigal	CDS	1449232	1449891	.	-	0	ID=GCA000160335_01349;Name=(d)CMP kinase;locus_tag=GCA000160335_01349;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000160335_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,RefSeq:WP_000644393.1,SO:0001217,UniParc:UPI00003B16AB,UniRef:UniRef100_Q6GGT4,UniRef:UniRef50_B9DNU7,UniRef:UniRef90_Q6GGT4;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	1449968	1450936	.	+	.	ID=GCA000160335_01350_gene;locus_tag=GCA000160335_01350;gene=ansA
contig_1	Pyrodigal	CDS	1449968	1450936	.	+	0	ID=GCA000160335_01350;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000160335_01350;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=ansA;Parent=GCA000160335_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_000681744.1,SO:0001217,UniParc:UPI00003B16AC,UniRef:UniRef100_A0A0E1X5A6,UniRef:UniRef50_K8E262,UniRef:UniRef90_A0A391A6D3
contig_1	Pyrodigal	gene	1451051	1452037	.	-	.	ID=GCA000160335_01351_gene;locus_tag=GCA000160335_01351;gene=trxB
contig_1	Pyrodigal	CDS	1451051	1452037	.	-	0	ID=GCA000160335_01351;Name=FAD-binding protein;locus_tag=GCA000160335_01351;product=FAD-binding protein;gene=trxB;Parent=GCA000160335_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K26960,RefSeq:WP_001174260.1,SO:0001217,UniParc:UPI00000D9E08,UniRef:UniRef100_Q2FYF3,UniRef:UniRef50_A0A380G2E5,UniRef:UniRef90_A0A2K4AII5;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	1452422	1453882	.	-	.	ID=GCA000160335_01352_gene;locus_tag=GCA000160335_01352;gene=ebp
contig_1	Pyrodigal	CDS	1452422	1453882	.	-	0	ID=GCA000160335_01352;Name=cell surface elastin binding protein;locus_tag=GCA000160335_01352;product=cell surface elastin binding protein;Dbxref=GO:0005886;gene=ebp;Parent=GCA000160335_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000069298.1,SO:0001217,UniParc:UPI00000BE731,UniRef:UniRef100_Q6GGT1,UniRef:UniRef50_Q2FYF1,UniRef:UniRef90_Q2FYF1,VFDB:VFC0001,VFDB:VFG001278
contig_1	Pyrodigal	gene	1454035	1455414	.	-	.	ID=GCA000160335_01353_gene;locus_tag=GCA000160335_01353;gene=recQ
contig_1	Pyrodigal	CDS	1454035	1455414	.	-	0	ID=GCA000160335_01353;Name=ATP-dependent DNA helicase;locus_tag=GCA000160335_01353;product=ATP-dependent DNA helicase;gene=recQ;Parent=GCA000160335_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000902107.1,SO:0001217,UniParc:UPI00003B16AD,UniRef:UniRef100_A0A7Z7QYP8,UniRef:UniRef50_A0A380G6G1,UniRef:UniRef90_A0A390B2J9
contig_1	Pyrodigal	gene	1455404	1456357	.	-	.	ID=GCA000160335_01354_gene;locus_tag=GCA000160335_01354;gene=ypbB
contig_1	Pyrodigal	CDS	1455404	1456357	.	-	0	ID=GCA000160335_01354;Name=Helicase Helix-turn-helix domain-containing protein;locus_tag=GCA000160335_01354;product=Helicase Helix-turn-helix domain-containing protein;gene=ypbB;Parent=GCA000160335_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4955,COG:S,RefSeq:WP_001163814.1,SO:0001217,UniParc:UPI00003B16AE,UniRef:UniRef100_A0A7Z7QYR4,UniRef:UniRef50_Q2FYE9,UniRef:UniRef90_Q2FYE9
contig_1	Pyrodigal	gene	1456465	1456713	.	+	.	ID=GCA000160335_01355_gene;locus_tag=GCA000160335_01355;gene=fer
contig_1	Pyrodigal	CDS	1456465	1456713	.	+	0	ID=GCA000160335_01355;Name=Ferredoxin;locus_tag=GCA000160335_01355;product=Ferredoxin;gene=fer;Parent=GCA000160335_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1141,RefSeq:WP_001151997.1,SO:0001217,UniParc:UPI00000D7814,UniRef:UniRef100_A0A7Z7QYV2,UniRef:UniRef50_P50727,UniRef:UniRef90_D3G002
contig_1	Pyrodigal	gene	1456819	1457364	.	-	.	ID=GCA000160335_01356_gene;locus_tag=GCA000160335_01356;gene=ribU
contig_1	Pyrodigal	CDS	1456819	1457364	.	-	0	ID=GCA000160335_01356;Name=Riboflavin transporter RibU;locus_tag=GCA000160335_01356;product=Riboflavin transporter RibU;Dbxref=GO:0005886,GO:0032217;gene=ribU;Parent=GCA000160335_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3601,COG:H,KEGG:K23675,RefSeq:WP_001186908.1,SO:0001217,UniParc:UPI00003B16AF,UniRef:UniRef100_E5QVT2,UniRef:UniRef50_E5QVT2,UniRef:UniRef90_E5QVT2
contig_1	Infernal	regulatory_region	1457426	1457560	2e-20	-	.	ID=HBCHLJIIAO_148;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1458012	1458263	.	-	.	ID=GCA000160335_01357_gene;locus_tag=GCA000160335_01357
contig_1	Pyrodigal	CDS	1458012	1458263	.	-	0	ID=GCA000160335_01357;Name=DUF1672 domain-containing protein;locus_tag=GCA000160335_01357;product=DUF1672 domain-containing protein;Parent=GCA000160335_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00202062CD,UniRef:UniRef90_UPI00202062CD
contig_1	Pyrodigal	gene	1458303	1458920	.	-	.	ID=GCA000160335_01358_gene;locus_tag=GCA000160335_01358
contig_1	Pyrodigal	CDS	1458303	1458920	.	-	0	ID=GCA000160335_01358;Name=DUF1672 domain-containing protein;locus_tag=GCA000160335_01358;product=DUF1672 domain-containing protein;Parent=GCA000160335_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1J3ZUN5
contig_1	Pyrodigal	gene	1458978	1459883	.	-	.	ID=GCA000160335_01359_gene;locus_tag=GCA000160335_01359
contig_1	Pyrodigal	CDS	1458978	1459883	.	-	0	ID=GCA000160335_01359;Name=DUF1672 domain-containing protein;locus_tag=GCA000160335_01359;product=DUF1672 domain-containing protein;Parent=GCA000160335_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000913238.1,SO:0001217,UniParc:UPI00003B16B1,UniRef:UniRef100_A0A7Z7QZK0,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_A0A389QEW1
contig_1	Pyrodigal	gene	1459973	1460158	.	-	.	ID=GCA000160335_01360_gene;locus_tag=GCA000160335_01360
contig_1	Pyrodigal	CDS	1459973	1460158	.	-	0	ID=GCA000160335_01360;Name=Lipoprotein;locus_tag=GCA000160335_01360;product=Lipoprotein;Parent=GCA000160335_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000470336.1,SO:0001217,UniParc:UPI00000D9E0E,UniRef:UniRef100_A0A7Z7QYW5,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0A0E1X540
contig_1	Pyrodigal	gene	1460399	1461385	.	-	.	ID=GCA000160335_01361_gene;locus_tag=GCA000160335_01361;gene=lukF-PV
contig_1	Pyrodigal	CDS	1460399	1461385	.	-	0	ID=GCA000160335_01361;Name=Panton-Valentine bi-component leukocidin subunit F;locus_tag=GCA000160335_01361;product=Panton-Valentine bi-component leukocidin subunit F;gene=lukF-PV;Parent=GCA000160335_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:BAA24008.1,SO:0001217,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q53747,VFDB:VFC0235,VFDB:VFG001276
contig_1	Pyrodigal	gene	1461387	1462325	.	-	.	ID=GCA000160335_01362_gene;locus_tag=GCA000160335_01362;gene=lukS-PV
contig_1	Pyrodigal	CDS	1461387	1462325	.	-	0	ID=GCA000160335_01362;Name=Panton-Valentine bi-component leukocidin subunit S;locus_tag=GCA000160335_01362;product=Panton-Valentine bi-component leukocidin subunit S;gene=lukS-PV;Parent=GCA000160335_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000239544,NCBIProtein:AGW33874.1,RefSeq:WP_000239544.1,SO:0001217,UniParc:UPI000009C32F,UniRef:UniRef100_M1SVD4,UniRef:UniRef50_O54081,UniRef:UniRef90_A0FGS6
contig_1	Pyrodigal	gene	1462690	1464168	.	-	.	ID=GCA000160335_01363_gene;locus_tag=GCA000160335_01363;gene=tnp
contig_1	Pyrodigal	CDS	1462690	1464168	.	-	0	ID=GCA000160335_01363;Name=IS1182 family transposase;locus_tag=GCA000160335_01363;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,SO:0001217,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	1464113	1464337	.	-	.	ID=GCA000160335_01364_gene;locus_tag=GCA000160335_01364
contig_1	Pyrodigal	CDS	1464113	1464337	.	-	0	ID=GCA000160335_01364;Name=Transposase for IS1272;locus_tag=GCA000160335_01364;product=Transposase for IS1272;Parent=GCA000160335_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4L5A1,UniRef:UniRef90_A0A2X2LWK3
contig_1	Infernal	gene	1464327	1464552	.	+	.	ID=GCA000160335_01365_gene;locus_tag=GCA000160335_01365;gene=tsr24
contig_1	Infernal	ncRNA	1464327	1464552	1.1e-28	+	.	ID=GCA000160335_01365;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_01365;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_01365_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1464638	1466092	.	-	.	ID=GCA000160335_01366_gene;locus_tag=GCA000160335_01366
contig_1	Pyrodigal	CDS	1464638	1466092	.	-	0	ID=GCA000160335_01366;Name=putative autolysin PH;locus_tag=GCA000160335_01366;product=putative autolysin PH;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0031640,GO:0042742,GO:0043093,GO:0071555;Parent=GCA000160335_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01448,RefSeq:WP_000909207.1,SO:0001217,UniParc:UPI00000D9E10,UniRef:UniRef100_M1TB12,UniRef:UniRef50_Q2FYD8,UniRef:UniRef90_Q2FYD8;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	1466103	1466405	.	-	.	ID=GCA000160335_01367_gene;locus_tag=GCA000160335_01367
contig_1	Pyrodigal	CDS	1466103	1466405	.	-	0	ID=GCA000160335_01367;Name=phage holin;locus_tag=GCA000160335_01367;product=phage holin;Dbxref=GO:0140911;Parent=GCA000160335_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_M1T2Y5,UniRef:UniRef90_M1T2Y5
contig_1	Pyrodigal	gene	1466531	1466905	.	-	.	ID=GCA000160335_01368_gene;locus_tag=GCA000160335_01368
contig_1	Pyrodigal	CDS	1466531	1466905	.	-	0	ID=GCA000160335_01368;Name=Phage protein;locus_tag=GCA000160335_01368;product=Phage protein;Parent=GCA000160335_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000340978.1,SO:0001217,UniParc:UPI0001B701B3,UniRef:UniRef100_UPI0001B701B3,UniRef:UniRef50_A0A9X0TMI7,UniRef:UniRef90_A0A1R3UDI8
contig_1	Pyrodigal	gene	1466961	1467248	.	-	.	ID=GCA000160335_01369_gene;locus_tag=GCA000160335_01369
contig_1	Pyrodigal	CDS	1466961	1467248	.	-	0	ID=GCA000160335_01369;Name=Phage protein;locus_tag=GCA000160335_01369;product=Phage protein;Parent=GCA000160335_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001262620.1,SO:0001217,UniParc:UPI0001A5C4F9,UniRef:UniRef100_A0A977TEU2,UniRef:UniRef50_A0A0H3JMR5,UniRef:UniRef90_A0A0H3JMR5
contig_1	Pyrodigal	gene	1467294	1467446	.	-	.	ID=GCA000160335_01370_gene;locus_tag=GCA000160335_01370
contig_1	Pyrodigal	CDS	1467294	1467446	.	-	0	ID=GCA000160335_01370;Name=Phage protein;locus_tag=GCA000160335_01370;product=Phage protein;Parent=GCA000160335_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001000058.1,SO:0001217,UniParc:UPI00000D7722,UniRef:UniRef100_A0A345AQI6,UniRef:UniRef50_A0A345AQI6,UniRef:UniRef90_A0A345AQI6
contig_1	Pyrodigal	gene	1467439	1471221	.	-	.	ID=GCA000160335_01371_gene;locus_tag=GCA000160335_01371
contig_1	Pyrodigal	CDS	1467439	1471221	.	-	0	ID=GCA000160335_01371;Name=Peptidase S74 domain-containing protein;locus_tag=GCA000160335_01371;product=Peptidase S74 domain-containing protein;Parent=GCA000160335_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_020967630.1,SO:0001217,UniParc:UPI00038DC366,UniRef:UniRef100_UPI00038DC366,UniRef:UniRef50_A0A2I6PDL0,UniRef:UniRef90_A0A9X9JUS9
contig_1	Pyrodigal	gene	1471237	1472727	.	-	.	ID=GCA000160335_01372_gene;locus_tag=GCA000160335_01372
contig_1	Pyrodigal	CDS	1471237	1472727	.	-	0	ID=GCA000160335_01372;Name=Siphovirus-type tail component C-terminal domain-containing protein;locus_tag=GCA000160335_01372;product=Siphovirus-type tail component C-terminal domain-containing protein;Parent=GCA000160335_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001154327.1,SO:0001217,UniParc:UPI000005444A,UniRef:UniRef100_Q2FWU4,UniRef:UniRef50_C5I676,UniRef:UniRef90_C5I676
contig_1	Pyrodigal	gene	1472727	1476059	.	-	.	ID=GCA000160335_01373_gene;locus_tag=GCA000160335_01373
contig_1	Pyrodigal	CDS	1472727	1476059	.	-	0	ID=GCA000160335_01373;Name=Tail length tape measure protein2;locus_tag=GCA000160335_01373;product=Tail length tape measure protein2;Parent=GCA000160335_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EA29D3,UniRef:UniRef100_A0ZS52,UniRef:UniRef50_A0ZS52,UniRef:UniRef90_A0ZS52
contig_1	Pyrodigal	gene	1476064	1477380	.	-	.	ID=GCA000160335_01374_gene;locus_tag=GCA000160335_01374
contig_1	Pyrodigal	CDS	1476064	1477380	.	-	0	ID=GCA000160335_01374;Name=Tail length tape measure protein1;locus_tag=GCA000160335_01374;product=Tail length tape measure protein1;Parent=GCA000160335_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EA29BF,UniRef:UniRef100_A0ZS51,UniRef:UniRef50_A0ZS51,UniRef:UniRef90_A0ZS51
contig_1	Pyrodigal	gene	1477618	1478064	.	-	.	ID=GCA000160335_01375_gene;locus_tag=GCA000160335_01375;gene=gpG
contig_1	Pyrodigal	CDS	1477618	1478064	.	-	0	ID=GCA000160335_01375;Name=phage tail assembly chaperone G;locus_tag=GCA000160335_01375;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000160335_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000442601.1,SO:0001217,UniParc:UPI0000054447,UniRef:UniRef100_Q2FWU1,UniRef:UniRef50_A0A2A4GVJ9,UniRef:UniRef90_O80053
contig_1	Pyrodigal	gene	1478129	1479082	.	-	.	ID=GCA000160335_01376_gene;locus_tag=GCA000160335_01376
contig_1	Pyrodigal	CDS	1478129	1479082	.	-	0	ID=GCA000160335_01376;Name=BIG2 domain-containing protein;locus_tag=GCA000160335_01376;product=BIG2 domain-containing protein;Parent=GCA000160335_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000570652.1,SO:0001217,UniParc:UPI0000054446,UniRef:UniRef100_Q2FWU0,UniRef:UniRef50_A0A418JI27,UniRef:UniRef90_O80052
contig_1	Pyrodigal	gene	1479083	1479463	.	-	.	ID=GCA000160335_01377_gene;locus_tag=GCA000160335_01377
contig_1	Pyrodigal	CDS	1479083	1479463	.	-	0	ID=GCA000160335_01377;Name=Phage protein;locus_tag=GCA000160335_01377;product=Phage protein;Parent=GCA000160335_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000611452.1,SO:0001217,UniParc:UPI0000054445,UniRef:UniRef100_Q2FWT9,UniRef:UniRef50_A0A2T4MKH0,UniRef:UniRef90_A0A1R3UDX6
contig_1	Pyrodigal	gene	1479460	1479837	.	-	.	ID=GCA000160335_01378_gene;locus_tag=GCA000160335_01378
contig_1	Pyrodigal	CDS	1479460	1479837	.	-	0	ID=GCA000160335_01378;Name=HK97-gp10 family putative phage morphogenesis protein;locus_tag=GCA000160335_01378;product=HK97-gp10 family putative phage morphogenesis protein;Parent=GCA000160335_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000501244.1,SO:0001217,UniParc:UPI000009BDB1,UniRef:UniRef100_Q2FWT8,UniRef:UniRef50_A0A1J0MGE3,UniRef:UniRef90_A0A1P8L6C1
contig_1	Pyrodigal	gene	1479837	1480172	.	-	.	ID=GCA000160335_01379_gene;locus_tag=GCA000160335_01379
contig_1	Pyrodigal	CDS	1479837	1480172	.	-	0	ID=GCA000160335_01379;Name=Phage head-tail adaptor%2C putative;locus_tag=GCA000160335_01379;product=Phage head-tail adaptor%2C putative;Parent=GCA000160335_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000975314.1,SO:0001217,UniParc:UPI000009BB29,UniRef:UniRef100_Q2FWT7,UniRef:UniRef50_A0A499SMY4,UniRef:UniRef90_Q2FWT7
contig_1	Pyrodigal	gene	1480159	1480491	.	-	.	ID=GCA000160335_01380_gene;locus_tag=GCA000160335_01380
contig_1	Pyrodigal	CDS	1480159	1480491	.	-	0	ID=GCA000160335_01380;Name=head-tail connector protein;locus_tag=GCA000160335_01380;product=head-tail connector protein;Dbxref=GO:0016032;Parent=GCA000160335_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001177484.1,SO:0001217,UniParc:UPI0000EA29DC,UniRef:UniRef100_A7TWQ4,UniRef:UniRef50_O80048,UniRef:UniRef90_O80048
contig_1	Pyrodigal	gene	1480500	1480658	.	-	.	ID=GCA000160335_01381_gene;locus_tag=GCA000160335_01381
contig_1	Pyrodigal	CDS	1480500	1480658	.	-	0	ID=GCA000160335_01381;Name=Bacteriophage;locus_tag=GCA000160335_01381;product=Bacteriophage;Parent=GCA000160335_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001252099.1,SO:0001217,UniParc:UPI0000054440,UniRef:UniRef100_A7TWQ3,UniRef:UniRef50_A7TWQ3,UniRef:UniRef90_A7TWQ3
contig_1	Pyrodigal	gene	1480694	1481941	.	-	.	ID=GCA000160335_01382_gene;locus_tag=GCA000160335_01382
contig_1	Pyrodigal	CDS	1480694	1481941	.	-	0	ID=GCA000160335_01382;Name=phage major capsid protein;locus_tag=GCA000160335_01382;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000160335_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849950.1,SO:0001217,UniParc:UPI00000D9EF8,UniRef:UniRef100_A7TWQ2,UniRef:UniRef50_A0A9W5U0R4,UniRef:UniRef90_A7TWQ2
contig_1	Pyrodigal	gene	1482029	1482613	.	-	.	ID=GCA000160335_01383_gene;locus_tag=GCA000160335_01383
contig_1	Pyrodigal	CDS	1482029	1482613	.	-	0	ID=GCA000160335_01383;Name=HK97 family phage prohead protease;locus_tag=GCA000160335_01383;product=HK97 family phage prohead protease;Dbxref=GO:0005198,GO:0008233,GO:0019068,GO:0019082;Parent=GCA000160335_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000032525.1,SO:0001217,UniParc:UPI000009BC4A,UniRef:UniRef100_Q2G1W7,UniRef:UniRef50_A0A268BTX9,UniRef:UniRef90_O80044
contig_1	Pyrodigal	gene	1482606	1483856	.	-	.	ID=GCA000160335_01384_gene;locus_tag=GCA000160335_01384
contig_1	Pyrodigal	CDS	1482606	1483856	.	-	0	ID=GCA000160335_01384;Name=phage portal protein;locus_tag=GCA000160335_01384;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000160335_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000511063.1,SO:0001217,UniParc:UPI0002F197D2,UniRef:UniRef100_UPI0002F197D2,UniRef:UniRef50_A0AA47LWV0,UniRef:UniRef90_A0AA47LWV0
contig_1	Pyrodigal	gene	1483862	1484101	.	-	.	ID=GCA000160335_01385_gene;locus_tag=GCA000160335_01385
contig_1	Pyrodigal	CDS	1483862	1484101	.	-	0	ID=GCA000160335_01385;Name=DUF1056 domain-containing protein;locus_tag=GCA000160335_01385;product=DUF1056 domain-containing protein;Parent=GCA000160335_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000644965.1,SO:0001217,UniParc:UPI000005443C,UniRef:UniRef100_Q2FWT5,UniRef:UniRef50_A0A385IRS8,UniRef:UniRef90_A0A385IRS8
contig_1	Pyrodigal	gene	1484076	1485770	.	-	.	ID=GCA000160335_01386_gene;locus_tag=GCA000160335_01386
contig_1	Pyrodigal	CDS	1484076	1485770	.	-	0	ID=GCA000160335_01386;Name=Terminase large subunit;locus_tag=GCA000160335_01386;product=Terminase large subunit;Parent=GCA000160335_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000133304.1,SO:0001217,UniParc:UPI000005443B,UniRef:UniRef100_Q2FWT4,UniRef:UniRef50_O80041,UniRef:UniRef90_O80041
contig_1	Pyrodigal	gene	1485773	1486240	.	-	.	ID=GCA000160335_01387_gene;locus_tag=GCA000160335_01387
contig_1	Pyrodigal	CDS	1485773	1486240	.	-	0	ID=GCA000160335_01387;Name=phage terminase small subunit P27 family;locus_tag=GCA000160335_01387;product=phage terminase small subunit P27 family;Parent=GCA000160335_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000919026.1,SO:0001217,UniParc:UPI000005443A,UniRef:UniRef100_Q2FWT3,UniRef:UniRef50_A0A8E4QK58,UniRef:UniRef90_A0A8E4QK58
contig_1	Pyrodigal	gene	1486370	1486723	.	-	.	ID=GCA000160335_01388_gene;locus_tag=GCA000160335_01388;gene=yajD
contig_1	Pyrodigal	CDS	1486370	1486723	.	-	0	ID=GCA000160335_01388;Name=Putative HNH nuclease YajD;locus_tag=GCA000160335_01388;product=Putative HNH nuclease YajD;gene=yajD;Parent=GCA000160335_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000009BE45,UniRef:UniRef100_A0A9X9JUL0,UniRef:UniRef50_A0A9X0PG32,UniRef:UniRef90_A0A077UMN6
contig_1	Pyrodigal	gene	1486729	1487181	.	-	.	ID=GCA000160335_01389_gene;locus_tag=GCA000160335_01389
contig_1	Pyrodigal	CDS	1486729	1487181	.	-	0	ID=GCA000160335_01389;Name=Nucleoside triphosphate pyrophosphohydrolase family protein;locus_tag=GCA000160335_01389;product=Nucleoside triphosphate pyrophosphohydrolase family protein;Parent=GCA000160335_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000406191.1,SO:0001217,UniParc:UPI00000D9EFB,UniRef:UniRef100_A0A9X9JXH5,UniRef:UniRef50_A0A345AQN3,UniRef:UniRef90_A0A345AQN3
contig_1	Pyrodigal	gene	1487296	1487766	.	-	.	ID=GCA000160335_01390_gene;locus_tag=GCA000160335_01390
contig_1	Pyrodigal	CDS	1487296	1487766	.	-	0	ID=GCA000160335_01390;Name=Phage protein;locus_tag=GCA000160335_01390;product=Phage protein;Parent=GCA000160335_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000282748.1,SO:0001217,UniParc:UPI0000054434,UniRef:UniRef100_A7TWP4,UniRef:UniRef50_A0A1P8L6D6,UniRef:UniRef90_A0A1P8L6D6
contig_1	Pyrodigal	gene	1487789	1487989	.	-	.	ID=GCA000160335_01391_gene;locus_tag=GCA000160335_01391
contig_1	Pyrodigal	CDS	1487789	1487989	.	-	0	ID=GCA000160335_01391;Name=Phage protein;locus_tag=GCA000160335_01391;product=Phage protein;Parent=GCA000160335_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794311.1,SO:0001217,UniParc:UPI0000EA29BD,UniRef:UniRef100_A0A9X9P2A0,UniRef:UniRef50_A0A0H3JV18,UniRef:UniRef90_A0A0H3JV18
contig_1	Pyrodigal	gene	1487989	1488141	.	-	.	ID=GCA000160335_01392_gene;locus_tag=GCA000160335_01392;gene=rinB
contig_1	Pyrodigal	CDS	1487989	1488141	.	-	0	ID=GCA000160335_01392;Name=transcriptional activator RinB;locus_tag=GCA000160335_01392;product=transcriptional activator RinB;gene=rinB;Parent=GCA000160335_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A653ZBR0,UniRef:UniRef90_A0AA47KWC5
contig_1	Pyrodigal	gene	1488131	1488367	.	-	.	ID=GCA000160335_01393_gene;locus_tag=GCA000160335_01393
contig_1	Pyrodigal	CDS	1488131	1488367	.	-	0	ID=GCA000160335_01393;Name=Phage protein;locus_tag=GCA000160335_01393;product=Phage protein;Parent=GCA000160335_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000483477.1,SO:0001217,UniParc:UPI000009C1B5,UniRef:UniRef100_M1TB32,UniRef:UniRef50_A9CR94,UniRef:UniRef90_A0A9P3ZCZ3
contig_1	Pyrodigal	gene	1488392	1488628	.	-	.	ID=GCA000160335_01394_gene;locus_tag=GCA000160335_01394
contig_1	Pyrodigal	CDS	1488392	1488628	.	-	0	ID=GCA000160335_01394;Name=DUF1381 domain-containing protein;locus_tag=GCA000160335_01394;product=DUF1381 domain-containing protein;Parent=GCA000160335_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000195831.1,SO:0001217,UniParc:UPI0000168270,UniRef:UniRef100_C8CH06,UniRef:UniRef50_A9CR91,UniRef:UniRef90_C8CH06
contig_1	Pyrodigal	gene	1488665	1489192	.	-	.	ID=GCA000160335_01395_gene;locus_tag=GCA000160335_01395;gene=dut
contig_1	Pyrodigal	CDS	1488665	1489192	.	-	0	ID=GCA000160335_01395;Name=dUTP diphosphatase;locus_tag=GCA000160335_01395;product=dUTP diphosphatase;Dbxref=GO:0000287,GO:0004170,GO:0006226,GO:0046081;gene=dut;Parent=GCA000160335_01395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000185638.1,SO:0001217,UniParc:UPI000009BD00,UniRef:UniRef100_A0A9X9JZ40,UniRef:UniRef50_A0A5C8XBY4,UniRef:UniRef90_A0A7Z1SEK6;ec_number=3.6.1.23
contig_1	Pyrodigal	gene	1489185	1489433	.	-	.	ID=GCA000160335_01396_gene;locus_tag=GCA000160335_01396
contig_1	Pyrodigal	CDS	1489185	1489433	.	-	0	ID=GCA000160335_01396;Name=DUF1024 domain-containing protein;locus_tag=GCA000160335_01396;product=DUF1024 domain-containing protein;Parent=GCA000160335_01396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065062.1,SO:0001217,UniParc:UPI0000EA29DD,UniRef:UniRef100_A7TWN9,UniRef:UniRef50_A9CR86,UniRef:UniRef90_A0A0N9BAY6
contig_1	Pyrodigal	gene	1489426	1489797	.	-	.	ID=GCA000160335_01397_gene;locus_tag=GCA000160335_01397
contig_1	Pyrodigal	CDS	1489426	1489797	.	-	0	ID=GCA000160335_01397;Name=Acetyltransferase;locus_tag=GCA000160335_01397;product=Acetyltransferase;Parent=GCA000160335_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EA29D4,UniRef:UniRef100_A0ZS31,UniRef:UniRef50_C8CH13,UniRef:UniRef90_A0ZS31
contig_1	Pyrodigal	gene	1489806	1490054	.	-	.	ID=GCA000160335_01398_gene;locus_tag=GCA000160335_01398
contig_1	Pyrodigal	CDS	1489806	1490054	.	-	0	ID=GCA000160335_01398;Name=Phage protein;locus_tag=GCA000160335_01398;product=Phage protein;Parent=GCA000160335_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001126843.1,SO:0001217,UniParc:UPI0000EA29D5,UniRef:UniRef100_A7TWN7,UniRef:UniRef50_A9CR79,UniRef:UniRef90_A9CR79
contig_1	Pyrodigal	gene	1490055	1490426	.	-	.	ID=GCA000160335_01399_gene;locus_tag=GCA000160335_01399
contig_1	Pyrodigal	CDS	1490055	1490426	.	-	0	ID=GCA000160335_01399;Name=Phage protein;locus_tag=GCA000160335_01399;product=Phage protein;Parent=GCA000160335_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001140284.1,SO:0001217,UniParc:UPI0000EA29CC,UniRef:UniRef100_A7TWN6,UniRef:UniRef50_A0A0E3T8L4,UniRef:UniRef90_A7TWN6
contig_1	Pyrodigal	gene	1490427	1490612	.	-	.	ID=GCA000160335_01400_gene;locus_tag=GCA000160335_01400
contig_1	Pyrodigal	CDS	1490427	1490612	.	-	0	ID=GCA000160335_01400;Name=DUF3113 domain-containing protein;locus_tag=GCA000160335_01400;product=DUF3113 domain-containing protein;Parent=GCA000160335_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001187231.1,SO:0001217,UniParc:UPI00015C0C7E,UniRef:UniRef100_A7YGR8,UniRef:UniRef50_B2ZYW2,UniRef:UniRef90_C8CGZ8
contig_1	Pyrodigal	gene	1490617	1491021	.	-	.	ID=GCA000160335_01401_gene;locus_tag=GCA000160335_01401
contig_1	Pyrodigal	CDS	1490617	1491021	.	-	0	ID=GCA000160335_01401;Name=DUF1064 domain-containing protein;locus_tag=GCA000160335_01401;product=DUF1064 domain-containing protein;Parent=GCA000160335_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000049784.1,SO:0001217,UniParc:UPI00000CAE93,UniRef:UniRef100_A7TWN5,UniRef:UniRef50_Q9G020,UniRef:UniRef90_A7TWN5
contig_1	Pyrodigal	gene	1491032	1491253	.	-	.	ID=GCA000160335_01402_gene;locus_tag=GCA000160335_01402
contig_1	Pyrodigal	CDS	1491032	1491253	.	-	0	ID=GCA000160335_01402;Name=DUF3269 domain-containing protein;locus_tag=GCA000160335_01402;product=DUF3269 domain-containing protein;Parent=GCA000160335_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001123666.1,SO:0001217,UniParc:UPI0000EA29DB,UniRef:UniRef100_A7YGR3,UniRef:UniRef50_Q4L3U2,UniRef:UniRef90_A7YGR3
contig_1	Pyrodigal	gene	1491266	1491427	.	-	.	ID=GCA000160335_01403_gene;locus_tag=GCA000160335_01403
contig_1	Pyrodigal	CDS	1491266	1491427	.	-	0	ID=GCA000160335_01403;Name=Phage protein;locus_tag=GCA000160335_01403;product=Phage protein;Parent=GCA000160335_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000237153.1,SO:0001217,UniParc:UPI0000505B41,UniRef:UniRef100_M9NRM1,UniRef:UniRef50_M9NRM1,UniRef:UniRef90_M9NRM1
contig_1	Pyrodigal	gene	1491421	1492200	.	-	.	ID=GCA000160335_01404_gene;locus_tag=GCA000160335_01404;gene=dnaC
contig_1	Pyrodigal	CDS	1491421	1492200	.	-	0	ID=GCA000160335_01404;Name=DnaC;locus_tag=GCA000160335_01404;product=DnaC;gene=dnaC;Parent=GCA000160335_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000803065.1,SO:0001217,UniParc:UPI0000505B68,UniRef:UniRef100_M9NTH0,UniRef:UniRef90_Q9G022
contig_1	Pyrodigal	gene	1492210	1492980	.	-	.	ID=GCA000160335_01405_gene;locus_tag=GCA000160335_01405
contig_1	Pyrodigal	CDS	1492210	1492980	.	-	0	ID=GCA000160335_01405;Name=DNA replication protein;locus_tag=GCA000160335_01405;product=DNA replication protein;Parent=GCA000160335_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000190224.1,SO:0001217,UniParc:UPI0000505B67,UniRef:UniRef100_M9NS94,UniRef:UniRef50_A0A1W6JPP4,UniRef:UniRef90_B2ZYV7
contig_1	Pyrodigal	gene	1493045	1493902	.	+	.	ID=GCA000160335_01406_gene;locus_tag=GCA000160335_01406
contig_1	Pyrodigal	CDS	1493045	1493902	.	+	0	ID=GCA000160335_01406;Name=DUF4393 domain-containing protein;locus_tag=GCA000160335_01406;product=DUF4393 domain-containing protein;Parent=GCA000160335_01406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000371250.1,SO:0001217,UniParc:UPI000050588D,UniRef:UniRef100_A0A0N9BAX1,UniRef:UniRef50_A0A0N9BAX1,UniRef:UniRef90_A0A0N9BAX1
contig_1	Pyrodigal	gene	1493895	1494011	.	-	.	ID=GCA000160335_01407_gene;locus_tag=GCA000160335_01407;pseudogene=unitary
contig_1	Pyrodigal	CDS	1493895	1494011	.	-	0	ID=GCA000160335_01407;Name=hypothetical protein;locus_tag=GCA000160335_01407;product=hypothetical protein;pseudogene=unitary;Parent=GCA000160335_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI000B29F9F1,UniRef:UniRef90_UPI000B29F9F1
contig_1	Pyrodigal	gene	1494008	1494679	.	-	.	ID=GCA000160335_01408_gene;locus_tag=GCA000160335_01408
contig_1	Pyrodigal	CDS	1494008	1494679	.	-	0	ID=GCA000160335_01408;Name=Phage protein;locus_tag=GCA000160335_01408;product=Phage protein;Parent=GCA000160335_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4L3T6,UniRef:UniRef90_M9NUK7
contig_1	Pyrodigal	gene	1494692	1495243	.	-	.	ID=GCA000160335_01409_gene;locus_tag=GCA000160335_01409
contig_1	Pyrodigal	CDS	1494692	1495243	.	-	0	ID=GCA000160335_01409;Name=Single-stranded DNA-binding protein;locus_tag=GCA000160335_01409;product=Single-stranded DNA-binding protein;Parent=GCA000160335_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704708.1,SO:0001217,UniParc:UPI0000EA29C2,UniRef:UniRef100_M9NRM4,UniRef:UniRef50_A0A6N3ATM7,UniRef:UniRef90_A0A6G4QEG7
contig_1	Pyrodigal	gene	1495273	1496046	.	-	.	ID=GCA000160335_01410_gene;locus_tag=GCA000160335_01410
contig_1	Pyrodigal	CDS	1495273	1496046	.	-	0	ID=GCA000160335_01410;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000160335_01410;product=AAA+ ATPase domain-containing protein;Parent=GCA000160335_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001288250.1,SO:0001217,UniParc:UPI0000EA29C1,UniRef:UniRef100_A0ZS20,UniRef:UniRef50_A9CR62,UniRef:UniRef90_A0ZS20
contig_1	Pyrodigal	gene	1496046	1496525	.	-	.	ID=GCA000160335_01411_gene;locus_tag=GCA000160335_01411
contig_1	Pyrodigal	CDS	1496046	1496525	.	-	0	ID=GCA000160335_01411;Name=Siphovirus Gp157 family protein;locus_tag=GCA000160335_01411;product=Siphovirus Gp157 family protein;Parent=GCA000160335_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000002519.1,SO:0001217,UniParc:UPI0000EA29D6,UniRef:UniRef100_A0ZS19,UniRef:UniRef50_M9NS34,UniRef:UniRef90_M9NS34
contig_1	Pyrodigal	gene	1496540	1496800	.	-	.	ID=GCA000160335_01412_gene;locus_tag=GCA000160335_01412
contig_1	Pyrodigal	CDS	1496540	1496800	.	-	0	ID=GCA000160335_01412;Name=DUF1108 domain-containing protein;locus_tag=GCA000160335_01412;product=DUF1108 domain-containing protein;Parent=GCA000160335_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291065.1,SO:0001217,UniParc:UPI00015C0C7B,UniRef:UniRef100_A0ZS18,UniRef:UniRef50_A4ZF80,UniRef:UniRef90_A0A0K1LLD6
contig_1	Pyrodigal	gene	1496805	1497107	.	-	.	ID=GCA000160335_01413_gene;locus_tag=GCA000160335_01413
contig_1	Pyrodigal	CDS	1496805	1497107	.	-	0	ID=GCA000160335_01413;Name=Phage protein;locus_tag=GCA000160335_01413;product=Phage protein;Parent=GCA000160335_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000165368.1,SO:0001217,UniParc:UPI0001B702BD,UniRef:UniRef100_UPI0001B702BD,UniRef:UniRef50_W5RAK4,UniRef:UniRef90_A0EWW7
contig_1	Pyrodigal	gene	1497202	1497363	.	-	.	ID=GCA000160335_01414_gene;locus_tag=GCA000160335_01414
contig_1	Pyrodigal	CDS	1497202	1497363	.	-	0	ID=GCA000160335_01414;Name=Phage protein;locus_tag=GCA000160335_01414;product=Phage protein;Parent=GCA000160335_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001285954.1,SO:0001217,UniParc:UPI0000505945,UniRef:UniRef100_Q4ZCQ0,UniRef:UniRef50_B2ZYU9,UniRef:UniRef90_B2ZYU9
contig_1	Pyrodigal	gene	1497375	1497638	.	-	.	ID=GCA000160335_01415_gene;locus_tag=GCA000160335_01415
contig_1	Pyrodigal	CDS	1497375	1497638	.	-	0	ID=GCA000160335_01415;Name=DNA-binding protein;locus_tag=GCA000160335_01415;product=DNA-binding protein;Parent=GCA000160335_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000034801.1,SO:0001217,UniParc:UPI0000EA29C6,UniRef:UniRef100_A0ZS16,UniRef:UniRef50_A0AAE8Z0C4,UniRef:UniRef90_A0AAE8Z0C4
contig_1	Pyrodigal	gene	1497668	1497886	.	-	.	ID=GCA000160335_01416_gene;locus_tag=GCA000160335_01416
contig_1	Pyrodigal	CDS	1497668	1497886	.	-	0	ID=GCA000160335_01416;Name=hypothetical protein;locus_tag=GCA000160335_01416;product=hypothetical protein;Parent=GCA000160335_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B701C5,UniRef:UniRef100_A0A9X9K1N4,UniRef:UniRef90_Q6R849
contig_1	Pyrodigal	gene	1497883	1498209	.	-	.	ID=GCA000160335_01417_gene;locus_tag=GCA000160335_01417
contig_1	Pyrodigal	CDS	1497883	1498209	.	-	0	ID=GCA000160335_01417;Name=Phage protein;locus_tag=GCA000160335_01417;product=Phage protein;Parent=GCA000160335_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001025595.1,SO:0001217,UniParc:UPI0000EA29D8,UniRef:UniRef100_A7TWM0,UniRef:UniRef50_A7TWM0,UniRef:UniRef90_A7TWM0
contig_1	Pyrodigal	gene	1498265	1498582	.	+	.	ID=GCA000160335_01418_gene;locus_tag=GCA000160335_01418
contig_1	Pyrodigal	CDS	1498265	1498582	.	+	0	ID=GCA000160335_01418;Name=hypothetical protein;locus_tag=GCA000160335_01418;product=hypothetical protein;Parent=GCA000160335_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0ZS13,UniRef:UniRef90_A0ZS13
contig_1	Pyrodigal	gene	1498536	1498775	.	-	.	ID=GCA000160335_01419_gene;locus_tag=GCA000160335_01419
contig_1	Pyrodigal	CDS	1498536	1498775	.	-	0	ID=GCA000160335_01419;Name=hypothetical protein;locus_tag=GCA000160335_01419;product=hypothetical protein;Parent=GCA000160335_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001294156.1,SO:0001217,UniParc:UPI0000EA29C4,UniRef:UniRef100_A0ZS12,UniRef:UniRef50_A0ZS12,UniRef:UniRef90_A0ZS12
contig_1	Pyrodigal	gene	1498852	1499268	.	-	.	ID=GCA000160335_01420_gene;locus_tag=GCA000160335_01420
contig_1	Pyrodigal	CDS	1498852	1499268	.	-	0	ID=GCA000160335_01420;Name=Transcriptional regulator;locus_tag=GCA000160335_01420;product=Transcriptional regulator;Parent=GCA000160335_01420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000EA29C7,UniRef:UniRef100_A0ZS11,UniRef:UniRef50_A0ZS11,UniRef:UniRef90_A0ZS11
contig_1	Pyrodigal	gene	1499281	1500033	.	-	.	ID=GCA000160335_01421_gene;locus_tag=GCA000160335_01421;gene=kilAC
contig_1	Pyrodigal	CDS	1499281	1500033	.	-	0	ID=GCA000160335_01421;Name=Anti-repressor;locus_tag=GCA000160335_01421;product=Anti-repressor;gene=kilAC;Parent=GCA000160335_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3645,COG:X,KEGG:K07741,RefSeq:WP_001148617.1,SO:0001217,UniParc:UPI0000EA29C5,UniRef:UniRef100_C5I631,UniRef:UniRef50_A0A0C6ELE4,UniRef:UniRef90_C5I631
contig_1	Pyrodigal	gene	1500049	1500291	.	-	.	ID=GCA000160335_01422_gene;locus_tag=GCA000160335_01422
contig_1	Pyrodigal	CDS	1500049	1500291	.	-	0	ID=GCA000160335_01422;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_01422;product=HTH cro/C1-type domain-containing protein;Parent=GCA000160335_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000639925.1,SO:0001217,UniParc:UPI0000EA29C9,UniRef:UniRef100_A0A9X9P4K8,UniRef:UniRef50_A0A2I6PDH8,UniRef:UniRef90_A0A2I6PDH8
contig_1	Pyrodigal	gene	1500455	1501171	.	+	.	ID=GCA000160335_01423_gene;locus_tag=GCA000160335_01423
contig_1	Pyrodigal	CDS	1500455	1501171	.	+	0	ID=GCA000160335_01423;Name=CI-like repressor;locus_tag=GCA000160335_01423;product=CI-like repressor;Parent=GCA000160335_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001083969.1,SO:0001217,UniParc:UPI0000EA29D1,UniRef:UniRef100_A0ZS08,UniRef:UniRef50_A0ZS08,UniRef:UniRef90_A0ZS08
contig_1	Pyrodigal	gene	1501226	1501660	.	+	.	ID=GCA000160335_01424_gene;locus_tag=GCA000160335_01424
contig_1	Pyrodigal	CDS	1501226	1501660	.	+	0	ID=GCA000160335_01424;Name=Lipoprotein;locus_tag=GCA000160335_01424;product=Lipoprotein;Parent=GCA000160335_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755719.1,SO:0001217,UniParc:UPI00003B16DB,UniRef:UniRef100_A0A9X9K1M6,UniRef:UniRef50_A0A641ACN8,UniRef:UniRef90_A0A641ACN8
contig_1	Pyrodigal	gene	1501689	1502084	.	+	.	ID=GCA000160335_01425_gene;locus_tag=GCA000160335_01425
contig_1	Pyrodigal	CDS	1501689	1502084	.	+	0	ID=GCA000160335_01425;Name=Phage protein;locus_tag=GCA000160335_01425;product=Phage protein;Parent=GCA000160335_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449656.1,SO:0001217,UniParc:UPI00003B16DC,UniRef:UniRef100_A0ZS06,UniRef:UniRef50_A0ZS06,UniRef:UniRef90_A0A0H3JWE4
contig_1	Pyrodigal	gene	1502284	1502907	.	-	.	ID=GCA000160335_01426_gene;locus_tag=GCA000160335_01426
contig_1	Pyrodigal	CDS	1502284	1502907	.	-	0	ID=GCA000160335_01426;Name=Phage protein;locus_tag=GCA000160335_01426;product=Phage protein;Parent=GCA000160335_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001166482.1,SO:0001217,UniParc:UPI00000D9E38,UniRef:UniRef100_A0A0Z4IKD9,UniRef:UniRef50_A0A077UK02,UniRef:UniRef90_A0A077UK02
contig_1	Pyrodigal	gene	1503017	1504222	.	+	.	ID=GCA000160335_01427_gene;locus_tag=GCA000160335_01427
contig_1	Pyrodigal	CDS	1503017	1504222	.	+	0	ID=GCA000160335_01427;Name=Integrase;locus_tag=GCA000160335_01427;product=Integrase;Parent=GCA000160335_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000264191.1,SO:0001217,UniParc:UPI00000D9E39,UniRef:UniRef100_M1RZA8,UniRef:UniRef50_P20709,UniRef:UniRef90_A0A977TEW5
contig_1	Pyrodigal	gene	1504265	1506247	.	-	.	ID=GCA000160335_01428_gene;locus_tag=GCA000160335_01428
contig_1	Pyrodigal	CDS	1504265	1506247	.	-	0	ID=GCA000160335_01428;Name=Lipoprotein;locus_tag=GCA000160335_01428;product=Lipoprotein;Parent=GCA000160335_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_223223701.1,SO:0001217,UniParc:UPI0002D7E12E,UniRef:UniRef100_UPI0002D7E12E,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0A0E1X540
contig_1	Pyrodigal	gene	1506280	1507227	.	-	.	ID=GCA000160335_01429_gene;locus_tag=GCA000160335_01429
contig_1	Pyrodigal	CDS	1506280	1507227	.	-	0	ID=GCA000160335_01429;Name=DUF1672 domain-containing protein;locus_tag=GCA000160335_01429;product=DUF1672 domain-containing protein;Parent=GCA000160335_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794318.1,SO:0001217,UniParc:UPI0001B702CF,UniRef:UniRef100_UPI0001B702CF,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_A0A0E1X6Z9
contig_1	Pyrodigal	gene	1507479	1509230	.	-	.	ID=GCA000160335_01430_gene;locus_tag=GCA000160335_01430;gene=srrB
contig_1	Pyrodigal	CDS	1507479	1509230	.	-	0	ID=GCA000160335_01430;Name=two-component system sensor histidine kinase SrrB;locus_tag=GCA000160335_01430;product=two-component system sensor histidine kinase SrrB;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0007234,GO:0030295;gene=srrB;Parent=GCA000160335_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000987769,COG:COG5002,COG:T,KEGG:K07651,RefSeq:WP_000987777.1,SO:0001217,UniParc:UPI00005B2E68,UniRef:UniRef100_Q6GGK7,UniRef:UniRef50_Q9L523,UniRef:UniRef90_Q9L523;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1509211	1509936	.	-	.	ID=GCA000160335_01431_gene;locus_tag=GCA000160335_01431;gene=srrA
contig_1	Pyrodigal	CDS	1509211	1509936	.	-	0	ID=GCA000160335_01431;Name=two-component system response regulator SrrA;locus_tag=GCA000160335_01431;product=two-component system response regulator SrrA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=srrA;Parent=GCA000160335_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000064078,COG:COG0745,COG:TK,RefSeq:WP_000064079.1,SO:0001217,UniParc:UPI000314C82C,UniRef:UniRef100_UPI000314C82C,UniRef:UniRef50_P35163,UniRef:UniRef90_Q2FY79
contig_1	Pyrodigal	gene	1510069	1510806	.	-	.	ID=GCA000160335_01432_gene;locus_tag=GCA000160335_01432;gene=rsuA
contig_1	Pyrodigal	CDS	1510069	1510806	.	-	0	ID=GCA000160335_01432;Name=Pseudouridine synthase;locus_tag=GCA000160335_01432;product=Pseudouridine synthase;gene=rsuA;Parent=GCA000160335_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_000159577.1,SO:0001217,UniParc:UPI000005430C,UniRef:UniRef100_Q2FY78,UniRef:UniRef50_A0A090YKY4,UniRef:UniRef90_A0A7U7IEK5
contig_1	Pyrodigal	gene	1510799	1511341	.	-	.	ID=GCA000160335_01433_gene;locus_tag=GCA000160335_01433;gene=scpB
contig_1	Pyrodigal	CDS	1510799	1511341	.	-	0	ID=GCA000160335_01433;Name=SMC-Scp complex subunit ScpB;locus_tag=GCA000160335_01433;product=SMC-Scp complex subunit ScpB;Dbxref=GO:0005515,GO:0005737,GO:0006260,GO:0007059,GO:0051301,GO:0051304;gene=scpB;Parent=GCA000160335_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1386,COG:K,KEGG:K06024,RefSeq:WP_000368652.1,SO:0001217,UniParc:UPI00003B16E0,UniRef:UniRef100_Q6GGK4,UniRef:UniRef50_Q2FY77,UniRef:UniRef90_Q2FY77
contig_1	Pyrodigal	gene	1511334	1512089	.	-	.	ID=GCA000160335_01434_gene;locus_tag=GCA000160335_01434;gene=scpA
contig_1	Pyrodigal	CDS	1511334	1512089	.	-	0	ID=GCA000160335_01434;Name=Segregation and condensation protein A;locus_tag=GCA000160335_01434;product=Segregation and condensation protein A;Dbxref=GO:0005737,GO:0006260,GO:0007059,GO:0051301;gene=scpA;Parent=GCA000160335_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1354,COG:L,KEGG:K05896,SO:0001217,UniParc:UPI00019F4DA9,UniRef:UniRef100_A0A2X2LVV0,UniRef:UniRef50_Q6GGK3,UniRef:UniRef90_Q6GGK3
contig_1	Pyrodigal	gene	1512157	1512663	.	+	.	ID=GCA000160335_01435_gene;locus_tag=GCA000160335_01435;gene=ypuF
contig_1	Pyrodigal	CDS	1512157	1512663	.	+	0	ID=GCA000160335_01435;Name=Cytosolic protein;locus_tag=GCA000160335_01435;product=Cytosolic protein;gene=ypuF;Parent=GCA000160335_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1547,COG:S,KEGG:K09763,RefSeq:WP_001183424.1,SO:0001217,UniParc:UPI00019CD564,UniRef:UniRef100_A0A7Z7W1Q4,UniRef:UniRef50_Q2FY75,UniRef:UniRef90_Q2FY75
contig_1	Pyrodigal	gene	1512741	1513628	.	-	.	ID=GCA000160335_01436_gene;locus_tag=GCA000160335_01436;gene=xerD
contig_1	Pyrodigal	CDS	1512741	1513628	.	-	0	ID=GCA000160335_01436;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000160335_01436;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000160335_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_000447733.1,SO:0001217,UniParc:UPI00000D7702,UniRef:UniRef100_Q5HFS5,UniRef:UniRef50_Q5HFS5,UniRef:UniRef90_Q5HFS5
contig_1	Pyrodigal	gene	1513677	1514126	.	-	.	ID=GCA000160335_01437_gene;locus_tag=GCA000160335_01437;gene=fur
contig_1	Pyrodigal	CDS	1513677	1514126	.	-	0	ID=GCA000160335_01437;Name=Transcriptional regulator%2C Fur%2C putative;locus_tag=GCA000160335_01437;product=Transcriptional regulator%2C Fur%2C putative;gene=fur;Parent=GCA000160335_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_000392691.1,SO:0001217,UniParc:UPI00000D782F,UniRef:UniRef100_Q2FY73,UniRef:UniRef50_Q2FY73,UniRef:UniRef90_Q2FY73
contig_1	Pyrodigal	gene	1514231	1514773	.	-	.	ID=GCA000160335_01438_gene;locus_tag=GCA000160335_01438;gene=mutT
contig_1	Pyrodigal	CDS	1514231	1514773	.	-	0	ID=GCA000160335_01438;Name=GDP-mannose pyrophosphatase;locus_tag=GCA000160335_01438;product=GDP-mannose pyrophosphatase;gene=mutT;Parent=GCA000160335_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000365236.1,SO:0001217,UniParc:UPI00003B16E3,UniRef:UniRef100_A0A7Z7QZG3,UniRef:UniRef50_A0A8I0L781,UniRef:UniRef90_A0A8I0L781
contig_1	Pyrodigal	gene	1514855	1515763	.	+	.	ID=GCA000160335_01439_gene;locus_tag=GCA000160335_01439;gene=pdxI
contig_1	Pyrodigal	CDS	1514855	1515763	.	+	0	ID=GCA000160335_01439;Name=NADPH-dependent aldo-keto reductase;locus_tag=GCA000160335_01439;product=NADPH-dependent aldo-keto reductase;gene=pdxI;Parent=GCA000160335_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_001171333.1,SO:0001217,UniParc:UPI00003B16E4,UniRef:UniRef100_A0A0E1X6Y8,UniRef:UniRef50_A0A380G9Q4,UniRef:UniRef90_A0A7U7JUR9
contig_1	Pyrodigal	gene	1515979	1516227	.	-	.	ID=GCA000160335_01440_gene;locus_tag=GCA000160335_01440
contig_1	Pyrodigal	CDS	1515979	1516227	.	-	0	ID=GCA000160335_01440;Name=Phage protein;locus_tag=GCA000160335_01440;product=Phage protein;Parent=GCA000160335_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000995806.1,SO:0001217,UniParc:UPI00003B16E5,UniRef:UniRef100_A0A0E1X563,UniRef:UniRef50_A0A2K4AGQ5,UniRef:UniRef90_A0A6A9GX39
contig_1	Pyrodigal	gene	1516243	1516998	.	-	.	ID=GCA000160335_01441_gene;locus_tag=GCA000160335_01441;gene=hetN
contig_1	Pyrodigal	CDS	1516243	1516998	.	-	0	ID=GCA000160335_01441;Name=HetN;locus_tag=GCA000160335_01441;product=HetN;gene=hetN;Parent=GCA000160335_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678227.1,SO:0001217,UniParc:UPI00019CD566,UniRef:UniRef100_A0A7U7EV53,UniRef:UniRef50_A0A7I8NJV3,UniRef:UniRef90_A0A0D1HST1
contig_1	Pyrodigal	gene	1517140	1517955	.	+	.	ID=GCA000160335_01442_gene;locus_tag=GCA000160335_01442;gene=proC
contig_1	Pyrodigal	CDS	1517140	1517955	.	+	0	ID=GCA000160335_01442;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000160335_01442;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0004735,GO:0005737,GO:0006561,GO:0055129;gene=proC;Parent=GCA000160335_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0345,COG:E,RefSeq:WP_000779748.1,SO:0001217,UniParc:UPI00003B16E7,UniRef:UniRef100_Q5HFR9,UniRef:UniRef50_Q49XV0,UniRef:UniRef90_Q99TZ0;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	1518060	1518980	.	-	.	ID=GCA000160335_01443_gene;locus_tag=GCA000160335_01443;gene=rnz
contig_1	Pyrodigal	CDS	1518060	1518980	.	-	0	ID=GCA000160335_01443;Name=ribonuclease Z;locus_tag=GCA000160335_01443;product=ribonuclease Z;Dbxref=GO:0008270,GO:0016891,GO:0042780,GO:0042781;gene=rnz;Parent=GCA000160335_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1234,COG:J,RefSeq:WP_000454059.1,SO:0001217,UniParc:UPI00003B16E8,UniRef:UniRef100_Q6GGJ4,UniRef:UniRef50_Q2FY67,UniRef:UniRef90_Q2FY67;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	1519293	1520777	.	+	.	ID=GCA000160335_01444_gene;locus_tag=GCA000160335_01444;gene=zwf
contig_1	Pyrodigal	CDS	1519293	1520777	.	+	0	ID=GCA000160335_01444;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000160335_01444;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0006006,GO:0006098,GO:0016614,GO:0050661;gene=zwf;Parent=GCA000160335_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,RefSeq:WP_000105070.1,SO:0001217,UniParc:UPI00000D771A,UniRef:UniRef100_Q2FY66,UniRef:UniRef50_Q5HP46,UniRef:UniRef90_Q5HP46;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1521007	1521873	.	+	.	ID=GCA000160335_01445_gene;locus_tag=GCA000160335_01445;gene=araC
contig_1	Pyrodigal	CDS	1521007	1521873	.	+	0	ID=GCA000160335_01445;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000160335_01445;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000160335_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000382585.1,SO:0001217,UniParc:UPI00000CAA4E,UniRef:UniRef100_A0A7Z7QZU6,UniRef:UniRef50_Q2FY65,UniRef:UniRef90_Q2FY65
contig_1	Pyrodigal	gene	1521956	1523605	.	-	.	ID=GCA000160335_01446_gene;locus_tag=GCA000160335_01446;gene=amyA
contig_1	Pyrodigal	CDS	1521956	1523605	.	-	0	ID=GCA000160335_01446;Name=Alpha-amylase;locus_tag=GCA000160335_01446;product=Alpha-amylase;gene=amyA;Parent=GCA000160335_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_001041925.1,SO:0001217,UniParc:UPI00003B16E9,UniRef:UniRef100_A0A7Z7QZR5,UniRef:UniRef50_O05242,UniRef:UniRef90_A0A7Z7QZR5
contig_1	Pyrodigal	gene	1523621	1524640	.	-	.	ID=GCA000160335_01447_gene;locus_tag=GCA000160335_01447;gene=purR
contig_1	Pyrodigal	CDS	1523621	1524640	.	-	0	ID=GCA000160335_01447;Name=Transcriptional regulator%2C putative;locus_tag=GCA000160335_01447;product=Transcriptional regulator%2C putative;gene=purR;Parent=GCA000160335_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000256335.1,SO:0001217,UniParc:UPI00003B16EA,UniRef:UniRef100_A0A7Z7W1R6,UniRef:UniRef50_Q2FY63,UniRef:UniRef90_Q2FY63
contig_1	Pyrodigal	gene	1524834	1525205	.	-	.	ID=GCA000160335_01448_gene;locus_tag=GCA000160335_01448;gene=gloA
contig_1	Pyrodigal	CDS	1524834	1525205	.	-	0	ID=GCA000160335_01448;Name=Glyoxalase;locus_tag=GCA000160335_01448;product=Glyoxalase;gene=gloA;Parent=GCA000160335_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_000413432.1,SO:0001217,UniParc:UPI00019CD5A7,UniRef:UniRef100_A0A7Z7W1V2,UniRef:UniRef50_A0A090M013,UniRef:UniRef90_A0A090M013
contig_1	Pyrodigal	gene	1525682	1526581	.	-	.	ID=GCA000160335_01449_gene;locus_tag=GCA000160335_01449;gene=pfkB
contig_1	Pyrodigal	CDS	1525682	1526581	.	-	0	ID=GCA000160335_01449;Name=PfkB family carbohydrate kinase;locus_tag=GCA000160335_01449;product=PfkB family carbohydrate kinase;gene=pfkB;Parent=GCA000160335_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000798483.1,SO:0001217,UniParc:UPI0001B7013C,UniRef:UniRef100_A0A7Z7W250,UniRef:UniRef50_A0A380SB86,UniRef:UniRef90_A0AAJ5CRQ9
contig_1	Pyrodigal	gene	1526596	1527810	.	-	.	ID=GCA000160335_01450_gene;locus_tag=GCA000160335_01450;gene=araJ
contig_1	Pyrodigal	CDS	1526596	1527810	.	-	0	ID=GCA000160335_01450;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_01450;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000160335_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08217,RefSeq:WP_000119398.1,SO:0001217,UniParc:UPI0001B70158,UniRef:UniRef100_UPI0001B70158,UniRef:UniRef50_A0A0H3JRQ3,UniRef:UniRef90_A0A0H3JRQ3
contig_1	Pyrodigal	gene	1527948	1528100	.	-	.	ID=GCA000160335_01451_gene;locus_tag=GCA000160335_01451
contig_1	Pyrodigal	CDS	1527948	1528100	.	-	0	ID=GCA000160335_01451;Name=hypothetical protein;locus_tag=GCA000160335_01451;product=hypothetical protein;Parent=GCA000160335_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CBD57A,UniRef:UniRef100_A0A7Z7W2Z9,UniRef:UniRef50_A0A077VKX6,UniRef:UniRef90_A0A077VKX6
contig_1	Pyrodigal	gene	1528126	1529532	.	-	.	ID=GCA000160335_01452_gene;locus_tag=GCA000160335_01452;gene=gndA
contig_1	Pyrodigal	CDS	1528126	1529532	.	-	0	ID=GCA000160335_01452;Name=NADP-dependent phosphogluconate dehydrogenase;locus_tag=GCA000160335_01452;product=NADP-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0006098,GO:0016054,GO:0019521,GO:0050661;gene=gndA;Parent=GCA000160335_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0362,COG:G,KEGG:K00033,RefSeq:WP_000193707.1,SO:0001217,UniParc:UPI00000542F9,UniRef:UniRef100_Q5HFR2,UniRef:UniRef50_P00350,UniRef:UniRef90_Q931R3;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	1529600	1530088	.	-	.	ID=GCA000160335_01453_gene;locus_tag=GCA000160335_01453
contig_1	Pyrodigal	CDS	1529600	1530088	.	-	0	ID=GCA000160335_01453;Name=M20/M25/M40 family metallo-hydrolase;locus_tag=GCA000160335_01453;product=M20/M25/M40 family metallo-hydrolase;Parent=GCA000160335_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00190CA15E,UniRef:UniRef90_UPI00190CA15E
contig_1	Pyrodigal	gene	1530085	1530732	.	-	.	ID=GCA000160335_01454_gene;locus_tag=GCA000160335_01454
contig_1	Pyrodigal	CDS	1530085	1530732	.	-	0	ID=GCA000160335_01454;Name=M20/M25/M40 family metallo-hydrolase;locus_tag=GCA000160335_01454;product=M20/M25/M40 family metallo-hydrolase;Parent=GCA000160335_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01258,SO:0001217,UniRef:UniRef50_A0A3S7H165,UniRef:UniRef90_UPI000D57CD92;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	1531082	1531174	.	+	.	ID=GCA000160335_01455_gene;locus_tag=GCA000160335_01455;gene=prli42
contig_1	Pyrodigal	CDS	1531082	1531174	.	+	0	ID=GCA000160335_01455;Name=stressosome-associated protein Prli42;locus_tag=GCA000160335_01455;product=stressosome-associated protein Prli42;gene=prli42;Parent=GCA000160335_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001180311.1,SO:0001217,UniParc:UPI0001573141,UniRef:UniRef100_Q2FY58,UniRef:UniRef50_Q2FY58,UniRef:UniRef90_Q2FY58
contig_1	Pyrodigal	gene	1531301	1532281	.	-	.	ID=GCA000160335_01456_gene;locus_tag=GCA000160335_01456;gene=ygaE
contig_1	Pyrodigal	CDS	1531301	1532281	.	-	0	ID=GCA000160335_01456;Name=Putative membrane protein;locus_tag=GCA000160335_01456;product=Putative membrane protein;gene=ygaE;Parent=GCA000160335_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_000916193.1,SO:0001217,UniParc:UPI00003B16EE,UniRef:UniRef100_A0A7Z7QYY3,UniRef:UniRef50_Q49XV8,UniRef:UniRef90_A0A7U7JUT7
contig_1	Pyrodigal	gene	1532295	1532732	.	-	.	ID=GCA000160335_01457_gene;locus_tag=GCA000160335_01457
contig_1	Pyrodigal	CDS	1532295	1532732	.	-	0	ID=GCA000160335_01457;Name=Bacilliredoxin SAR1592;locus_tag=GCA000160335_01457;product=Bacilliredoxin SAR1592;Dbxref=GO:0045454;Parent=GCA000160335_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000367421.1,SO:0001217,UniParc:UPI0001B7015B,UniRef:UniRef100_UPI0001B7015B,UniRef:UniRef50_Q2FY55,UniRef:UniRef90_Q2FY55
contig_1	Pyrodigal	gene	1533082	1534356	.	-	.	ID=GCA000160335_01458_gene;locus_tag=GCA000160335_01458;gene=aceF
contig_1	Pyrodigal	CDS	1533082	1534356	.	-	0	ID=GCA000160335_01458;Name=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000160335_01458;product=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;gene=aceF;Parent=GCA000160335_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000406855.1,SO:0001217,UniParc:UPI00003B16F0,UniRef:UniRef100_A0A7Z7QZ92,UniRef:UniRef50_P37942,UniRef:UniRef90_A0A0U1MLL2
contig_1	Pyrodigal	gene	1534369	1535352	.	-	.	ID=GCA000160335_01459_gene;locus_tag=GCA000160335_01459;gene=acoB
contig_1	Pyrodigal	CDS	1534369	1535352	.	-	0	ID=GCA000160335_01459;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000160335_01459;product=Pyruvate dehydrogenase E1 component subunit beta;gene=acoB;Parent=GCA000160335_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_001096631.1,SO:0001217,UniParc:UPI00003B16F1,UniRef:UniRef100_A0AAJ4YUR9,UniRef:UniRef50_P37941,UniRef:UniRef90_Q2FY53
contig_1	Pyrodigal	gene	1535352	1536344	.	-	.	ID=GCA000160335_01460_gene;locus_tag=GCA000160335_01460;gene=acoA
contig_1	Pyrodigal	CDS	1535352	1536344	.	-	0	ID=GCA000160335_01460;Name=2-oxoisovalerate dehydrogenase subunit alpha;locus_tag=GCA000160335_01460;product=2-oxoisovalerate dehydrogenase subunit alpha;gene=acoA;Parent=GCA000160335_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000568358.1,SO:0001217,UniParc:UPI00003B16F2,UniRef:UniRef100_A0A7Z7QYY8,UniRef:UniRef50_A0A085UCJ1,UniRef:UniRef90_A0A2Y2J981
contig_1	Pyrodigal	gene	1536360	1537781	.	-	.	ID=GCA000160335_01461_gene;locus_tag=GCA000160335_01461;gene=lpdA
contig_1	Pyrodigal	CDS	1536360	1537781	.	-	0	ID=GCA000160335_01461;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000160335_01461;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0050660;gene=lpdA;Parent=GCA000160335_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_001291540.1,SO:0001217,UniParc:UPI000175C238,UniRef:UniRef100_A0A7Z7QZW1,UniRef:UniRef50_A0A0U1MLM9,UniRef:UniRef90_A0A0U1MLM9;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1537932	1539611	.	-	.	ID=GCA000160335_01462_gene;locus_tag=GCA000160335_01462;gene=recN
contig_1	Pyrodigal	CDS	1537932	1539611	.	-	0	ID=GCA000160335_01462;Name=DNA repair protein RecN;locus_tag=GCA000160335_01462;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006310;gene=recN;Parent=GCA000160335_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_000942208.1,SO:0001217,UniParc:UPI0001B701DA,UniRef:UniRef100_A0A7Z7QZT0,UniRef:UniRef50_B9E6Q3,UniRef:UniRef90_A0A0D3Q7N8
contig_1	Pyrodigal	gene	1539627	1540079	.	-	.	ID=GCA000160335_01463_gene;locus_tag=GCA000160335_01463;gene=ahrC
contig_1	Pyrodigal	CDS	1539627	1540079	.	-	0	ID=GCA000160335_01463;Name=transcriptional regulator AhrC/ArgR;locus_tag=GCA000160335_01463;product=transcriptional regulator AhrC/ArgR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=ahrC;Parent=GCA000160335_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_001124985.1,SO:0001217,UniParc:UPI00000D783E,UniRef:UniRef100_Q2FY49,UniRef:UniRef50_P17893,UniRef:UniRef90_Q2FY49
contig_1	Pyrodigal	gene	1540510	1541391	.	-	.	ID=GCA000160335_01464_gene;locus_tag=GCA000160335_01464;gene=ispA
contig_1	Pyrodigal	CDS	1540510	1541391	.	-	0	ID=GCA000160335_01464;Name=Geranyltranstransferase%2C putative;locus_tag=GCA000160335_01464;product=Geranyltranstransferase%2C putative;gene=ispA;Parent=GCA000160335_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_000183386.1,SO:0001217,UniParc:UPI00003B16F5,UniRef:UniRef100_A0A7Z7W1V7,UniRef:UniRef50_A0A4U9TB05,UniRef:UniRef90_Q2FY48
contig_1	Pyrodigal	gene	1541369	1541599	.	-	.	ID=GCA000160335_01465_gene;locus_tag=GCA000160335_01465;gene=xseB
contig_1	Pyrodigal	CDS	1541369	1541599	.	-	0	ID=GCA000160335_01465;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000160335_01465;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000160335_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_000159866.1,SO:0001217,UniParc:UPI00003B16F6,UniRef:UniRef100_Q6GGH6,UniRef:UniRef50_Q2FY47,UniRef:UniRef90_Q2FY47;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1541592	1542929	.	-	.	ID=GCA000160335_01466_gene;locus_tag=GCA000160335_01466;gene=xseA
contig_1	Pyrodigal	CDS	1541592	1542929	.	-	0	ID=GCA000160335_01466;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000160335_01466;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA000160335_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_001286928.1,SO:0001217,UniParc:UPI00000542E9,UniRef:UniRef100_Q2FY46,UniRef:UniRef50_Q2FY46,UniRef:UniRef90_Q2FY46;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1542946	1543335	.	-	.	ID=GCA000160335_01467_gene;locus_tag=GCA000160335_01467;gene=nusB
contig_1	Pyrodigal	CDS	1542946	1543335	.	-	0	ID=GCA000160335_01467;Name=transcription antitermination factor NusB;locus_tag=GCA000160335_01467;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000160335_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_000087385.1,SO:0001217,UniParc:UPI0000130A67,UniRef:UniRef100_Q2FY45,UniRef:UniRef50_Q2FY45,UniRef:UniRef90_Q2FY45
contig_1	Pyrodigal	gene	1543395	1543757	.	-	.	ID=GCA000160335_01468_gene;locus_tag=GCA000160335_01468;gene=yloU
contig_1	Pyrodigal	CDS	1543395	1543757	.	-	0	ID=GCA000160335_01468;Name=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;locus_tag=GCA000160335_01468;product=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;gene=yloU;Parent=GCA000160335_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000241588.1,SO:0001217,UniParc:UPI00000542E7,UniRef:UniRef100_Q2FY44,UniRef:UniRef50_A0A853V4U3,UniRef:UniRef90_Q2FY44
contig_1	Pyrodigal	gene	1543772	1545127	.	-	.	ID=GCA000160335_01469_gene;locus_tag=GCA000160335_01469;gene=accC
contig_1	Pyrodigal	CDS	1543772	1545127	.	-	0	ID=GCA000160335_01469;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000160335_01469;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0004075,GO:0009317,GO:0016874;gene=accC;Parent=GCA000160335_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4770,COG:I,RefSeq:WP_000756612.1,SO:0001217,UniParc:UPI00000542E6,UniRef:UniRef100_Q2FY43,UniRef:UniRef50_A0A0U1E6Z3,UniRef:UniRef90_A0A0Y9APZ0;ec_number=6.3.4.14
contig_1	Pyrodigal	gene	1545127	1545591	.	-	.	ID=GCA000160335_01470_gene;locus_tag=GCA000160335_01470;gene=accB
contig_1	Pyrodigal	CDS	1545127	1545591	.	-	0	ID=GCA000160335_01470;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA000160335_01470;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA000160335_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001009518.1,SO:0001217,UniParc:UPI00019F4D85,UniRef:UniRef100_A0A7Z7QYY4,UniRef:UniRef50_A0A090LU16,UniRef:UniRef90_A0A090LU16;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1546065	1546622	.	-	.	ID=GCA000160335_01471_gene;locus_tag=GCA000160335_01471;gene=efp
contig_1	Pyrodigal	CDS	1546065	1546622	.	-	0	ID=GCA000160335_01471;Name=elongation factor P;locus_tag=GCA000160335_01471;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA000160335_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_000626504.1,SO:0001217,UniParc:UPI00000542E4,UniRef:UniRef100_Q2FY41,UniRef:UniRef50_Q2FY41,UniRef:UniRef90_Q2FY41
contig_1	Pyrodigal	gene	1546648	1547709	.	-	.	ID=GCA000160335_01472_gene;locus_tag=GCA000160335_01472;gene=pepP
contig_1	Pyrodigal	CDS	1546648	1547709	.	-	0	ID=GCA000160335_01472;Name=Aminopeptidase P family protein;locus_tag=GCA000160335_01472;product=Aminopeptidase P family protein;gene=pepP;Parent=GCA000160335_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_000087104.1,SO:0001217,UniParc:UPI00003B16F9,UniRef:UniRef100_A0A7Z7QZ26,UniRef:UniRef50_A0A0D6XTL2,UniRef:UniRef90_A0A2K4AGC7;ec_number=3.4.11.9
contig_1	Pyrodigal	gene	1547814	1548395	.	+	.	ID=GCA000160335_01473_gene;locus_tag=GCA000160335_01473
contig_1	Pyrodigal	CDS	1547814	1548395	.	+	0	ID=GCA000160335_01473;Name=Lipoprotein;locus_tag=GCA000160335_01473;product=Lipoprotein;Parent=GCA000160335_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000737686.1,SO:0001217,UniParc:UPI00000542E2,UniRef:UniRef100_Q2FY39,UniRef:UniRef50_A0A1J3ZXK3,UniRef:UniRef90_Q2FY39
contig_1	Pyrodigal	gene	1548409	1548627	.	+	.	ID=GCA000160335_01474_gene;locus_tag=GCA000160335_01474
contig_1	Pyrodigal	CDS	1548409	1548627	.	+	0	ID=GCA000160335_01474;Name=hypothetical protein;locus_tag=GCA000160335_01474;product=hypothetical protein;Parent=GCA000160335_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001244301.1,SO:0001217,UniParc:UPI00000D9E4F,UniRef:UniRef100_A0A0E1XFI2,UniRef:UniRef50_Q2FY38,UniRef:UniRef90_Q2FY38
contig_1	Pyrodigal	gene	1548691	1549521	.	-	.	ID=GCA000160335_01475_gene;locus_tag=GCA000160335_01475;gene=lipM
contig_1	Pyrodigal	CDS	1548691	1549521	.	-	0	ID=GCA000160335_01475;Name=Octanoyltransferase LipM;locus_tag=GCA000160335_01475;product=Octanoyltransferase LipM;Dbxref=GO:0009107,GO:0033819;gene=lipM;Parent=GCA000160335_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,RefSeq:WP_000141110.1,SO:0001217,UniParc:UPI00003B16FA,UniRef:UniRef100_A0A7Z7QYZ8,UniRef:UniRef50_P54511,UniRef:UniRef90_Q2FY37;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	1549679	1550065	.	+	.	ID=GCA000160335_01476_gene;locus_tag=GCA000160335_01476;gene=pspE
contig_1	Pyrodigal	CDS	1549679	1550065	.	+	0	ID=GCA000160335_01476;Name=Rhodanese domain-containing protein;locus_tag=GCA000160335_01476;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000160335_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_001276571.1,SO:0001217,UniParc:UPI00000542DF,UniRef:UniRef100_Q2FY36,UniRef:UniRef50_Q2FY36,UniRef:UniRef90_Q2FY36
contig_1	Pyrodigal	gene	1550450	1551922	.	-	.	ID=GCA000160335_01477_gene;locus_tag=GCA000160335_01477;gene=gcvPB
contig_1	Pyrodigal	CDS	1550450	1551922	.	-	0	ID=GCA000160335_01477;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;locus_tag=GCA000160335_01477;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;Dbxref=GO:0004375,GO:0005829,GO:0005960,GO:0006546,GO:0016594,GO:0019464,GO:0030170;gene=gcvPB;Parent=GCA000160335_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1003,COG:E,RefSeq:WP_000202178.1,SO:0001217,UniParc:UPI00003B16FB,UniRef:UniRef100_Q6GGG4,UniRef:UniRef50_P54377,UniRef:UniRef90_Q2FY35;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1551915	1553261	.	-	.	ID=GCA000160335_01478_gene;locus_tag=GCA000160335_01478;gene=gcvPA
contig_1	Pyrodigal	CDS	1551915	1553261	.	-	0	ID=GCA000160335_01478;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;locus_tag=GCA000160335_01478;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;Dbxref=GO:0004375,GO:0006546,GO:0009116,GO:0019464;gene=gcvPA;Parent=GCA000160335_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0403,COG:E,RefSeq:WP_000019697.1,SO:0001217,UniParc:UPI00019CD5D2,UniRef:UniRef100_A0A7Z7W1W1,UniRef:UniRef50_Q81M07,UniRef:UniRef90_Q2FY34;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1553281	1554372	.	-	.	ID=GCA000160335_01479_gene;locus_tag=GCA000160335_01479;gene=gcvT
contig_1	Pyrodigal	CDS	1553281	1554372	.	-	0	ID=GCA000160335_01479;Name=glycine cleavage system aminomethyltransferase GcvT;locus_tag=GCA000160335_01479;product=glycine cleavage system aminomethyltransferase GcvT;Dbxref=GO:0004047,GO:0005737,GO:0005829,GO:0005960,GO:0008483,GO:0019464;gene=gcvT;Parent=GCA000160335_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0404,COG:E,RefSeq:WP_000093347.1,SO:0001217,UniParc:UPI00003B16FD,UniRef:UniRef100_Q6GGG2,UniRef:UniRef50_Q2FY33,UniRef:UniRef90_Q2FY33;ec_number=2.1.2.10
contig_1	Infernal	regulatory_region	1554447	1554544	7.2e-12	-	.	ID=HBCHLJIIAO_166;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1554531	1555055	.	-	.	ID=GCA000160335_01480_gene;locus_tag=GCA000160335_01480;gene=aroK
contig_1	Pyrodigal	CDS	1554531	1555055	.	-	0	ID=GCA000160335_01480;Name=Shikimate kinase;locus_tag=GCA000160335_01480;product=Shikimate kinase;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroK;Parent=GCA000160335_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_001015125.1,SO:0001217,UniParc:UPI00003B16FE,UniRef:UniRef100_Q6GGG1,UniRef:UniRef50_Q2FY32,UniRef:UniRef90_Q2FY32;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	1555288	1555662	.	-	.	ID=GCA000160335_01481_gene;locus_tag=GCA000160335_01481;gene=comGF
contig_1	Pyrodigal	CDS	1555288	1555662	.	-	0	ID=GCA000160335_01481;Name=Late competence protein ComGF%2C access of DNA to ComEA;locus_tag=GCA000160335_01481;product=Late competence protein ComGF%2C access of DNA to ComEA;gene=comGF;Parent=GCA000160335_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4940,COG:X,KEGG:K02248,SO:0001217,UniParc:UPI0002CB0617,UniRef:UniRef100_A0A7Z7W1R8,UniRef:UniRef50_A0A2X4YB59,UniRef:UniRef90_A0A2X4YB59
contig_1	Pyrodigal	gene	1555703	1556002	.	-	.	ID=GCA000160335_01482_gene;locus_tag=GCA000160335_01482
contig_1	Pyrodigal	CDS	1555703	1556002	.	-	0	ID=GCA000160335_01482;Name=Competence protein ComGE;locus_tag=GCA000160335_01482;product=Competence protein ComGE;Parent=GCA000160335_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000844413.1,SO:0001217,UniParc:UPI00000542D8,UniRef:UniRef100_Q2G2I8,UniRef:UniRef50_A0A2K4AGD7,UniRef:UniRef90_Q2G2I8
contig_1	Pyrodigal	gene	1555989	1556423	.	-	.	ID=GCA000160335_01483_gene;locus_tag=GCA000160335_01483;gene=comGD
contig_1	Pyrodigal	CDS	1555989	1556423	.	-	0	ID=GCA000160335_01483;Name=competence type IV pilus minor pilin ComGD;locus_tag=GCA000160335_01483;product=competence type IV pilus minor pilin ComGD;gene=comGD;Parent=GCA000160335_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,SO:0001217,UniParc:UPI00003B1700,UniRef:UniRef100_A0A7Z7QZ37,UniRef:UniRef50_Q2G2I7,UniRef:UniRef90_Q2G2I7
contig_1	Pyrodigal	gene	1556413	1556724	.	-	.	ID=GCA000160335_01484_gene;locus_tag=GCA000160335_01484;gene=comGC
contig_1	Pyrodigal	CDS	1556413	1556724	.	-	0	ID=GCA000160335_01484;Name=competence type IV pilus major pilin ComGC;locus_tag=GCA000160335_01484;product=competence type IV pilus major pilin ComGC;Dbxref=GO:0030420;gene=comGC;Parent=GCA000160335_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4537,COG:X,RefSeq:WP_000472257.1,SO:0001217,UniParc:UPI00003B1701,UniRef:UniRef100_A0A7Z7QZJ5,UniRef:UniRef50_A0A380G8S0,UniRef:UniRef90_A0A0U1MLR1
contig_1	Pyrodigal	gene	1556738	1557808	.	-	.	ID=GCA000160335_01485_gene;locus_tag=GCA000160335_01485;gene=comGB
contig_1	Pyrodigal	CDS	1556738	1557808	.	-	0	ID=GCA000160335_01485;Name=competence type IV pilus assembly protein ComGB;locus_tag=GCA000160335_01485;product=competence type IV pilus assembly protein ComGB;gene=comGB;Parent=GCA000160335_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1459,COG:NU,RefSeq:WP_000776412.1,SO:0001217,UniParc:UPI00003B1702,UniRef:UniRef100_A0A7Z7QYZ1,UniRef:UniRef50_Q2G2I6,UniRef:UniRef90_Q2G2I6
contig_1	Pyrodigal	gene	1557780	1558382	.	-	.	ID=GCA000160335_01486_gene;locus_tag=GCA000160335_01486
contig_1	Pyrodigal	CDS	1557780	1558382	.	-	0	ID=GCA000160335_01486;Name=Bacterial type II secretion system protein E domain-containing protein;locus_tag=GCA000160335_01486;product=Bacterial type II secretion system protein E domain-containing protein;Parent=GCA000160335_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_S2XHQ2
contig_1	Pyrodigal	gene	1558405	1558755	.	-	.	ID=GCA000160335_01487_gene;locus_tag=GCA000160335_01487
contig_1	Pyrodigal	CDS	1558405	1558755	.	-	0	ID=GCA000160335_01487;Name=Late competence protein;locus_tag=GCA000160335_01487;product=Late competence protein;Parent=GCA000160335_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380GN61
contig_1	Pyrodigal	gene	1558807	1559430	.	-	.	ID=GCA000160335_01488_gene;locus_tag=GCA000160335_01488;gene=gloB
contig_1	Pyrodigal	CDS	1558807	1559430	.	-	0	ID=GCA000160335_01488;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000160335_01488;product=Metallo-beta-lactamase domain-containing protein;gene=gloB;Parent=GCA000160335_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_001223008.1,SO:0001217,UniParc:UPI00000542D1,UniRef:UniRef100_Q2FY29,UniRef:UniRef50_Q2FY29,UniRef:UniRef90_Q2FY29
contig_1	Pyrodigal	gene	1559427	1559756	.	-	.	ID=GCA000160335_01489_gene;locus_tag=GCA000160335_01489;gene=yqgV
contig_1	Pyrodigal	CDS	1559427	1559756	.	-	0	ID=GCA000160335_01489;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000160335_01489;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000160335_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_001018871.1,SO:0001217,UniParc:UPI00000542D0,UniRef:UniRef100_Q2FY28,UniRef:UniRef50_Q56200,UniRef:UniRef90_A0A7U7JUV1
contig_1	Pyrodigal	gene	1559756	1560742	.	-	.	ID=GCA000160335_01490_gene;locus_tag=GCA000160335_01490;gene=nagC
contig_1	Pyrodigal	CDS	1559756	1560742	.	-	0	ID=GCA000160335_01490;Name=Glucokinase;locus_tag=GCA000160335_01490;product=Glucokinase;gene=nagC;Parent=GCA000160335_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000161314.1,SO:0001217,UniParc:UPI00000542CF,UniRef:UniRef100_Q2FY27,UniRef:UniRef50_Q56198,UniRef:UniRef90_A0A7U7JUV0
contig_1	Pyrodigal	gene	1560923	1562386	.	-	.	ID=GCA000160335_01491_gene;locus_tag=GCA000160335_01491;gene=glpG
contig_1	Pyrodigal	CDS	1560923	1562386	.	-	0	ID=GCA000160335_01491;Name=Membrane peptidase%2C contains TPR repeat domain;locus_tag=GCA000160335_01491;product=Membrane peptidase%2C contains TPR repeat domain;gene=glpG;Parent=GCA000160335_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,KEGG:K19225,RefSeq:WP_001017867.1,SO:0001217,UniParc:UPI00000CABCF,UniRef:UniRef100_Q2FY24,UniRef:UniRef50_A0A4U9T9N5,UniRef:UniRef90_A0A6B5H1W4;ec_number=3.4.21.105
contig_1	Pyrodigal	gene	1562398	1562991	.	-	.	ID=GCA000160335_01492_gene;locus_tag=GCA000160335_01492;gene=fAU1
contig_1	Pyrodigal	CDS	1562398	1562991	.	-	0	ID=GCA000160335_01492;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000160335_01492;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0006730,GO:0030272;gene=fAU1;Parent=GCA000160335_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,SO:0001217,UniParc:UPI00019CD606,UniRef:UniRef100_A0A7Z7QZY1,UniRef:UniRef50_Q2FY23,UniRef:UniRef90_Q2FY23;ec_number=6.3.3.2
contig_1	Pyrodigal	gene	1563146	1563295	.	-	.	ID=GCA000160335_01493_gene;locus_tag=GCA000160335_01493;gene=rpmG
contig_1	Pyrodigal	CDS	1563146	1563295	.	-	0	ID=GCA000160335_01493;Name=50S ribosomal protein L33;locus_tag=GCA000160335_01493;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000160335_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265709.1,SO:0001217,UniParc:UPI00000542C9,UniRef:UniRef100_Q2FY22,UniRef:UniRef50_Q5HNZ8,UniRef:UniRef90_Q5HNZ8
contig_1	Pyrodigal	gene	1563408	1565483	.	-	.	ID=GCA000160335_01494_gene;locus_tag=GCA000160335_01494;gene=ftsI
contig_1	Pyrodigal	CDS	1563408	1565483	.	-	0	ID=GCA000160335_01494;Name=Putative penicillin-binding protein;locus_tag=GCA000160335_01494;product=Putative penicillin-binding protein;gene=ftsI;Parent=GCA000160335_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K12553,RefSeq:WP_000919764.1,SO:0001217,UniParc:UPI00003B1705,UniRef:UniRef100_A0A7Z7W1T2,UniRef:UniRef50_P83331,UniRef:UniRef90_P83331;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1565604	1566203	.	-	.	ID=GCA000160335_01495_gene;locus_tag=GCA000160335_01495;gene=sodA
contig_1	Pyrodigal	CDS	1565604	1566203	.	-	0	ID=GCA000160335_01495;Name=Superoxide dismutase [Mn/Fe] 1;locus_tag=GCA000160335_01495;product=Superoxide dismutase [Mn/Fe] 1;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodA;Parent=GCA000160335_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000863556.1,SO:0001217,UniParc:UPI00000542C7,UniRef:UniRef100_P0A0J3,UniRef:UniRef50_Q9K4V3,UniRef:UniRef90_P0A0J3;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1566479	1566889	.	-	.	ID=GCA000160335_01496_gene;locus_tag=GCA000160335_01496;gene=fur
contig_1	Pyrodigal	CDS	1566479	1566889	.	-	0	ID=GCA000160335_01496;Name=Ferric uptake regulation protein;locus_tag=GCA000160335_01496;product=Ferric uptake regulation protein;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=fur;Parent=GCA000160335_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,KEGG:K02076,RefSeq:WP_001095260.1,SO:0001217,UniParc:UPI00000542C6,UniRef:UniRef100_Q2FY19,UniRef:UniRef50_Q2FY19,UniRef:UniRef90_Q2FY19
contig_1	Pyrodigal	gene	1566876	1567748	.	-	.	ID=GCA000160335_01497_gene;locus_tag=GCA000160335_01497;gene=znuB
contig_1	Pyrodigal	CDS	1566876	1567748	.	-	0	ID=GCA000160335_01497;Name=Metal ABC transporter permease;locus_tag=GCA000160335_01497;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000160335_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,SO:0001217,UniParc:UPI00005FE533,UniRef:UniRef100_A0A7Z7W1S3,UniRef:UniRef50_Q2FY18,UniRef:UniRef90_Q2FY18
contig_1	Pyrodigal	gene	1567781	1568566	.	-	.	ID=GCA000160335_01498_gene;locus_tag=GCA000160335_01498;gene=znuC
contig_1	Pyrodigal	CDS	1567781	1568566	.	-	0	ID=GCA000160335_01498;Name=ABC transporter%2C putative;locus_tag=GCA000160335_01498;product=ABC transporter%2C putative;gene=znuC;Parent=GCA000160335_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_001213908.1,SO:0001217,UniParc:UPI00000542C4,UniRef:UniRef100_Q2FY17,UniRef:UniRef50_A0A1W7AC50,UniRef:UniRef90_Q2FY17
contig_1	Pyrodigal	gene	1568692	1569582	.	-	.	ID=GCA000160335_01499_gene;locus_tag=GCA000160335_01499;gene=nfo
contig_1	Pyrodigal	CDS	1568692	1569582	.	-	0	ID=GCA000160335_01499;Name=deoxyribonuclease IV;locus_tag=GCA000160335_01499;product=deoxyribonuclease IV;Dbxref=GO:0003677,GO:0003906,GO:0006281,GO:0006284,GO:0008081,GO:0008270,GO:0008833;gene=nfo;Parent=GCA000160335_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0648,COG:L,RefSeq:WP_000924211.1,SO:0001217,UniParc:UPI00003B1706,UniRef:UniRef100_Q6GGE2,UniRef:UniRef50_Q2FY16,UniRef:UniRef90_Q2FY16;ec_number=3.1.21.2
contig_1	Pyrodigal	gene	1569592	1570938	.	-	.	ID=GCA000160335_01500_gene;locus_tag=GCA000160335_01500;gene=cshB
contig_1	Pyrodigal	CDS	1569592	1570938	.	-	0	ID=GCA000160335_01500;Name=DEAD-box ATP-dependent RNA helicase CshB;locus_tag=GCA000160335_01500;product=DEAD-box ATP-dependent RNA helicase CshB;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0009409,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshB;Parent=GCA000160335_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001062173.1,SO:0001217,UniParc:UPI00003B1707,UniRef:UniRef100_A0A7Z7QZK6,UniRef:UniRef50_Q2FY15,UniRef:UniRef90_Q2FY15;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1571052	1572152	.	-	.	ID=GCA000160335_01501_gene;locus_tag=GCA000160335_01501;gene=nIF3
contig_1	Pyrodigal	CDS	1571052	1572152	.	-	0	ID=GCA000160335_01501;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA000160335_01501;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0046872,GO:0051540;gene=nIF3;Parent=GCA000160335_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0327,COG:H,KEGG:K22391,RefSeq:WP_000683921.1,SO:0001217,UniParc:UPI00003B1708,UniRef:UniRef100_Q6GGE0,UniRef:UniRef50_P67272,UniRef:UniRef90_P67272;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	1572155	1572832	.	-	.	ID=GCA000160335_01502_gene;locus_tag=GCA000160335_01502;gene=trmK
contig_1	Pyrodigal	CDS	1572155	1572832	.	-	0	ID=GCA000160335_01502;Name=tRNA-m1A22 methylase;locus_tag=GCA000160335_01502;product=tRNA-m1A22 methylase;gene=trmK;Parent=GCA000160335_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2384,COG:J,KEGG:K06967,RefSeq:WP_000624581.1,SO:0001217,UniParc:UPI00003B1709,UniRef:UniRef100_A0A7Z7QZ08,UniRef:UniRef50_A0A239Z5U5,UniRef:UniRef90_A0A2X2M890;ec_number=2.1.1.217
contig_1	Pyrodigal	gene	1572963	1574069	.	-	.	ID=GCA000160335_01503_gene;locus_tag=GCA000160335_01503;gene=rpoD
contig_1	Pyrodigal	CDS	1572963	1574069	.	-	0	ID=GCA000160335_01503;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA000160335_01503;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0003677,GO:0005737,GO:0006352,GO:0006355,GO:0016987;gene=rpoD;Parent=GCA000160335_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03086,RefSeq:WP_001283058.1,SO:0001217,UniParc:UPI0001B702F0,UniRef:UniRef100_UPI0001B702F0,UniRef:UniRef50_P0A0J0,UniRef:UniRef90_P0A0J0
contig_1	Pyrodigal	gene	1574293	1576092	.	-	.	ID=GCA000160335_01504_gene;locus_tag=GCA000160335_01504;gene=dnaG
contig_1	Pyrodigal	CDS	1574293	1576092	.	-	0	ID=GCA000160335_01504;Name=DNA primase;locus_tag=GCA000160335_01504;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003678,GO:0003896,GO:0005524,GO:0005737,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000160335_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_001217253.1,SO:0001217,UniParc:UPI00003B170A,UniRef:UniRef100_Q6GGD7,UniRef:UniRef50_O05338,UniRef:UniRef90_O05338;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	1576153	1576971	.	-	.	ID=GCA000160335_01505_gene;locus_tag=GCA000160335_01505;gene=ppsR
contig_1	Pyrodigal	CDS	1576153	1576971	.	-	0	ID=GCA000160335_01505;Name=Putative pyruvate%2C phosphate dikinase regulatory protein;locus_tag=GCA000160335_01505;product=Putative pyruvate%2C phosphate dikinase regulatory protein;Dbxref=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gene=ppsR;Parent=GCA000160335_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1806,COG:T,RefSeq:WP_000411298.1,SO:0001217,UniParc:UPI00000D786D,UniRef:UniRef100_P67199,UniRef:UniRef50_Q2FY10,UniRef:UniRef90_Q2FY10;ec_number=2.7.4.27
contig_1	Pyrodigal	gene	1576982	1577521	.	-	.	ID=GCA000160335_01506_gene;locus_tag=GCA000160335_01506;gene=glpR
contig_1	Pyrodigal	CDS	1576982	1577521	.	-	0	ID=GCA000160335_01506;Name=CBS domain-containing protein;locus_tag=GCA000160335_01506;product=CBS domain-containing protein;gene=glpR;Parent=GCA000160335_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,SO:0001217,UniParc:UPI00000D9E5D,UniRef:UniRef100_A0A7Z7QZ22,UniRef:UniRef50_O34994,UniRef:UniRef90_A0A7U7JV00
contig_1	Pyrodigal	gene	1577940	1579331	.	+	.	ID=GCA000160335_01507_gene;locus_tag=GCA000160335_01507;gene=glyQS
contig_1	Pyrodigal	CDS	1577940	1579331	.	+	0	ID=GCA000160335_01507;Name=glycine--tRNA ligase;locus_tag=GCA000160335_01507;product=glycine--tRNA ligase;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005737,GO:0006426,GO:0016740,GO:0046983;gene=glyQS;Parent=GCA000160335_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0423,COG:J,KEGG:K01880,RefSeq:WP_001030080.1,SO:0001217,UniParc:UPI000002E8EC,UniRef:UniRef100_Q2FY08,UniRef:UniRef50_Q2FY08,UniRef:UniRef90_Q2FY08;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	1579482	1580228	.	-	.	ID=GCA000160335_01508_gene;locus_tag=GCA000160335_01508;gene=recO
contig_1	Pyrodigal	CDS	1579482	1580228	.	-	0	ID=GCA000160335_01508;Name=DNA repair protein RecO;locus_tag=GCA000160335_01508;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000160335_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,RefSeq:WP_001574124.1,SO:0001217,UniParc:UPI00019CD63E,UniRef:UniRef100_Q6GGD4,UniRef:UniRef50_Q49Y09,UniRef:UniRef90_Q2FGF7
contig_1	Pyrodigal	gene	1580256	1581155	.	-	.	ID=GCA000160335_01509_gene;locus_tag=GCA000160335_01509;gene=era
contig_1	Pyrodigal	CDS	1580256	1581155	.	-	0	ID=GCA000160335_01509;Name=GTPase Era;locus_tag=GCA000160335_01509;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181;gene=era;Parent=GCA000160335_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000134765.1,SO:0001217,UniParc:UPI000012A100,UniRef:UniRef100_Q2FGF6,UniRef:UniRef50_P42182,UniRef:UniRef90_Q2FY06
contig_1	Pyrodigal	gene	1581156	1581560	.	-	.	ID=GCA000160335_01510_gene;locus_tag=GCA000160335_01510;gene=cdd
contig_1	Pyrodigal	CDS	1581156	1581560	.	-	0	ID=GCA000160335_01510;Name=cytidine deaminase;locus_tag=GCA000160335_01510;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005737,GO:0008270,GO:0008655,GO:0009972;gene=cdd;Parent=GCA000160335_01510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,KEGG:K01489,RefSeq:WP_000121871.1,SO:0001217,UniParc:UPI00003B170C,UniRef:UniRef100_A0A7Z7W1X2,UniRef:UniRef50_A0A1W7AC49,UniRef:UniRef90_A0A2K4AGX2;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	1581571	1581915	.	-	.	ID=GCA000160335_01511_gene;locus_tag=GCA000160335_01511;gene=ybeY
contig_1	Pyrodigal	CDS	1581571	1581915	.	-	0	ID=GCA000160335_01511;Name=rRNA maturation RNase YbeY;locus_tag=GCA000160335_01511;product=rRNA maturation RNase YbeY;Dbxref=GO:0004540,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000160335_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0818,COG:I,RefSeq:WP_000819532.1,SO:0001217,UniParc:UPI00000542B7,UniRef:UniRef100_Q2FY03,UniRef:UniRef50_Q2FY03,UniRef:UniRef90_Q2FY03
contig_1	Pyrodigal	gene	1581918	1582385	.	-	.	ID=GCA000160335_01512_gene;locus_tag=GCA000160335_01512;gene=ybeY
contig_1	Pyrodigal	CDS	1581918	1582385	.	-	0	ID=GCA000160335_01512;Name=rRNA maturation RNase YbeY;locus_tag=GCA000160335_01512;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000160335_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_000494130.1,SO:0001217,UniParc:UPI00003B170D,UniRef:UniRef100_Q6GGD0,UniRef:UniRef50_Q2FY02,UniRef:UniRef90_Q2FY02;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1582386	1583333	.	-	.	ID=GCA000160335_01513_gene;locus_tag=GCA000160335_01513;gene=phoH
contig_1	Pyrodigal	CDS	1582386	1583333	.	-	0	ID=GCA000160335_01513;Name=PhoH-like protein;locus_tag=GCA000160335_01513;product=PhoH-like protein;gene=phoH;Parent=GCA000160335_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1702,COG:T,KEGG:K06217,RefSeq:WP_001117769.1,SO:0001217,UniParc:UPI00003B170E,UniRef:UniRef100_A0A7Z7W322,UniRef:UniRef50_A0A174T1P7,UniRef:UniRef90_A0A115CVC0
contig_1	Pyrodigal	gene	1583636	1584334	.	-	.	ID=GCA000160335_01514_gene;locus_tag=GCA000160335_01514
contig_1	Pyrodigal	CDS	1583636	1584334	.	-	0	ID=GCA000160335_01514;Name=Iron transporter;locus_tag=GCA000160335_01514;product=Iron transporter;Parent=GCA000160335_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110603.1,SO:0001217,UniParc:UPI00000542B4,UniRef:UniRef100_Q2FY00,UniRef:UniRef50_Q2FY00,UniRef:UniRef90_Q2FY00
contig_1	Pyrodigal	gene	1584351	1585340	.	-	.	ID=GCA000160335_01515_gene;locus_tag=GCA000160335_01515;gene=floA
contig_1	Pyrodigal	CDS	1584351	1585340	.	-	0	ID=GCA000160335_01515;Name=flotillin-like protein FloA;locus_tag=GCA000160335_01515;product=flotillin-like protein FloA;Dbxref=GO:0005886,GO:0045121;gene=floA;Parent=GCA000160335_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4864,COG:M,RefSeq:WP_000492114.1,SO:0001217,UniParc:UPI00000542B3,UniRef:UniRef100_Q2FXZ9,UniRef:UniRef50_P54466,UniRef:UniRef90_Q49Y16
contig_1	Pyrodigal	gene	1585358	1586065	.	-	.	ID=GCA000160335_01516_gene;locus_tag=GCA000160335_01516;gene=nfeD
contig_1	Pyrodigal	CDS	1585358	1586065	.	-	0	ID=GCA000160335_01516;Name=NfeD-like C-terminal domain-containing protein;locus_tag=GCA000160335_01516;product=NfeD-like C-terminal domain-containing protein;gene=nfeD;Parent=GCA000160335_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1030,COG:O,SO:0001217,UniParc:UPI00000D76DF,UniRef:UniRef100_W8U5J3,UniRef:UniRef50_Q2FXZ8,UniRef:UniRef90_Q2FXZ8
contig_1	Pyrodigal	gene	1586286	1586462	.	-	.	ID=GCA000160335_01517_gene;locus_tag=GCA000160335_01517;gene=rpsU
contig_1	Pyrodigal	CDS	1586286	1586462	.	-	0	ID=GCA000160335_01517;Name=30S ribosomal protein S21;locus_tag=GCA000160335_01517;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA000160335_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_000048060.1,SO:0001217,UniParc:UPI000004802C,UniRef:UniRef100_Q2FXZ7,UniRef:UniRef50_Q5M3E1,UniRef:UniRef90_Q2FXZ7
contig_1	Pyrodigal	gene	1586755	1588101	.	-	.	ID=GCA000160335_01518_gene;locus_tag=GCA000160335_01518;gene=mtaB
contig_1	Pyrodigal	CDS	1586755	1588101	.	-	0	ID=GCA000160335_01518;Name=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;locus_tag=GCA000160335_01518;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;Dbxref=GO:0006400,GO:0051539,GO:0061712,GO:1904047;gene=mtaB;Parent=GCA000160335_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K18707,RefSeq:WP_000108671.1,SO:0001217,UniParc:UPI00003B170F,UniRef:UniRef100_A0A7Z7QZC5,UniRef:UniRef50_P54462,UniRef:UniRef90_A0A077URN1;ec_number=2.8.4.5
contig_1	Pyrodigal	gene	1588108	1588860	.	-	.	ID=GCA000160335_01519_gene;locus_tag=GCA000160335_01519;gene=rsmE
contig_1	Pyrodigal	CDS	1588108	1588860	.	-	0	ID=GCA000160335_01519;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000160335_01519;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0006364,GO:0008168;gene=rsmE;Parent=GCA000160335_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_001190115.1,SO:0001217,UniParc:UPI00003B1710,UniRef:UniRef100_A0A7Z7QZM4,UniRef:UniRef50_A0A122ER25,UniRef:UniRef90_A0A122ER25;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	1588862	1589800	.	-	.	ID=GCA000160335_01520_gene;locus_tag=GCA000160335_01520;gene=prmA
contig_1	Pyrodigal	CDS	1588862	1589800	.	-	0	ID=GCA000160335_01520;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA000160335_01520;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0005737,GO:0008757,GO:0032259,GO:0036211,GO:0042054;gene=prmA;Parent=GCA000160335_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2264,COG:J,RefSeq:WP_001104621.1,SO:0001217,UniParc:UPI00003B1711,UniRef:UniRef100_Q6GGC2,UniRef:UniRef50_Q2FXZ4,UniRef:UniRef90_Q2FXZ4;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1589804	1590943	.	-	.	ID=GCA000160335_01521_gene;locus_tag=GCA000160335_01521;gene=dnaJ
contig_1	Pyrodigal	CDS	1589804	1590943	.	-	0	ID=GCA000160335_01521;Name=molecular chaperone DnaJ;locus_tag=GCA000160335_01521;product=molecular chaperone DnaJ;Dbxref=GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000160335_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_001119020.1,SO:0001217,UniParc:UPI00003B1712,UniRef:UniRef100_Q6GGC1,UniRef:UniRef50_P95830,UniRef:UniRef90_Q2FXZ3
contig_1	Pyrodigal	gene	1591079	1592911	.	-	.	ID=GCA000160335_01522_gene;locus_tag=GCA000160335_01522;gene=dnaK
contig_1	Pyrodigal	CDS	1591079	1592911	.	-	0	ID=GCA000160335_01522;Name=molecular chaperone DnaK;locus_tag=GCA000160335_01522;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=dnaK;Parent=GCA000160335_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_000034716.1,SO:0001217,UniParc:UPI0000129601,UniRef:UniRef100_Q2FXZ2,UniRef:UniRef50_P17820,UniRef:UniRef90_Q2FXZ2
contig_1	Pyrodigal	gene	1592980	1593606	.	-	.	ID=GCA000160335_01523_gene;locus_tag=GCA000160335_01523;gene=grpE
contig_1	Pyrodigal	CDS	1592980	1593606	.	-	0	ID=GCA000160335_01523;Name=nucleotide exchange factor GrpE;locus_tag=GCA000160335_01523;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005737,GO:0006457,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000160335_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,RefSeq:WP_000182215.1,SO:0001217,UniParc:UPI00000542AA,UniRef:UniRef100_Q2FXZ1,UniRef:UniRef50_Q2FXZ1,UniRef:UniRef90_Q2FXZ1
contig_1	Pyrodigal	gene	1593638	1594615	.	-	.	ID=GCA000160335_01524_gene;locus_tag=GCA000160335_01524;gene=hrcA
contig_1	Pyrodigal	CDS	1593638	1594615	.	-	0	ID=GCA000160335_01524;Name=heat-inducible transcriptional repressor HrcA;locus_tag=GCA000160335_01524;product=heat-inducible transcriptional repressor HrcA;Dbxref=GO:0003677,GO:0006355,GO:0045892;gene=hrcA;Parent=GCA000160335_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1420,COG:K,KEGG:K03705,RefSeq:WP_000627147.1,SO:0001217,UniParc:UPI00003B1713,UniRef:UniRef100_Q6GGB8,UniRef:UniRef50_P68792,UniRef:UniRef90_P68792
contig_1	Pyrodigal	gene	1594716	1595873	.	-	.	ID=GCA000160335_01525_gene;locus_tag=GCA000160335_01525;gene=hemW
contig_1	Pyrodigal	CDS	1594716	1595873	.	-	0	ID=GCA000160335_01525;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000160335_01525;product=radical SAM family heme chaperone HemW;Dbxref=GO:0005737,GO:0006779,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000160335_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,SO:0001217,UniRef:UniRef50_A0A0D6HI97,UniRef:UniRef90_A0A0D6HI97
contig_1	Pyrodigal	gene	1596347	1598170	.	-	.	ID=GCA000160335_01526_gene;locus_tag=GCA000160335_01526;gene=lepA
contig_1	Pyrodigal	CDS	1596347	1598170	.	-	0	ID=GCA000160335_01526;Name=translation elongation factor 4;locus_tag=GCA000160335_01526;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:1990606;gene=lepA;Parent=GCA000160335_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_000368338.1,SO:0001217,UniParc:UPI000012E48A,UniRef:UniRef100_P65271,UniRef:UniRef50_Q2FXY7,UniRef:UniRef90_Q2FXY7;ec_number=3.6.5.n1
contig_1	Pyrodigal	gene	1598516	1598767	.	+	.	ID=GCA000160335_01527_gene;locus_tag=GCA000160335_01527;gene=rpsT
contig_1	Pyrodigal	CDS	1598516	1598767	.	+	0	ID=GCA000160335_01527;Name=30S ribosomal protein S20;locus_tag=GCA000160335_01527;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000160335_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_001274017.1,SO:0001217,UniParc:UPI0000048018,UniRef:UniRef100_Q2FXY6,UniRef:UniRef50_Q5HNW1,UniRef:UniRef90_Q2FXY6
contig_1	Pyrodigal	gene	1598812	1599786	.	-	.	ID=GCA000160335_01528_gene;locus_tag=GCA000160335_01528;gene=holA
contig_1	Pyrodigal	CDS	1598812	1599786	.	-	0	ID=GCA000160335_01528;Name=DNA polymerase III subunit delta;locus_tag=GCA000160335_01528;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=holA;Parent=GCA000160335_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_001282570.1,SO:0001217,UniParc:UPI00003B1715,UniRef:UniRef100_A0A7Z7QZ70,UniRef:UniRef50_K9AV25,UniRef:UniRef90_A0A3A5LSD9;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1599843	1602044	.	-	.	ID=GCA000160335_01529_gene;locus_tag=GCA000160335_01529;gene=comEC
contig_1	Pyrodigal	CDS	1599843	1602044	.	-	0	ID=GCA000160335_01529;Name=DNA internalization-related competence protein ComEC/Rec2;locus_tag=GCA000160335_01529;product=DNA internalization-related competence protein ComEC/Rec2;Dbxref=GO:0005215,GO:0009290,GO:0016020;gene=comEC;Parent=GCA000160335_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2333,COG:U,KEGG:K02238,RefSeq:WP_000967506.1,SO:0001217,UniParc:UPI00003B1716,UniRef:UniRef100_A0A7Z7QZN2,UniRef:UniRef50_A0A6K1MRM3,UniRef:UniRef90_A0A6K1MRM3
contig_1	Pyrodigal	gene	1602049	1602480	.	-	.	ID=GCA000160335_01530_gene;locus_tag=GCA000160335_01530;gene=comEB
contig_1	Pyrodigal	CDS	1602049	1602480	.	-	0	ID=GCA000160335_01530;Name=ComE operon protein 2;locus_tag=GCA000160335_01530;product=ComE operon protein 2;gene=comEB;Parent=GCA000160335_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2131,COG:FJ,SO:0001217,UniParc:UPI00025068EF,UniRef:UniRef100_A0A0E1X764,UniRef:UniRef50_A0A1E7X972,UniRef:UniRef90_A0A380G1G9
contig_1	Pyrodigal	gene	1602602	1603279	.	-	.	ID=GCA000160335_01531_gene;locus_tag=GCA000160335_01531;gene=comEA
contig_1	Pyrodigal	CDS	1602602	1603279	.	-	0	ID=GCA000160335_01531;Name=ComE operon protein 1;locus_tag=GCA000160335_01531;product=ComE operon protein 1;gene=comEA;Parent=GCA000160335_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,SO:0001217,UniParc:UPI00003B1718,UniRef:UniRef100_A0A0Z3BSJ1,UniRef:UniRef50_A0A9P2YX25,UniRef:UniRef90_A0A9P2YX25
contig_1	Pyrodigal	gene	1603328	1604044	.	-	.	ID=GCA000160335_01532_gene;locus_tag=GCA000160335_01532
contig_1	Pyrodigal	CDS	1603328	1604044	.	-	0	ID=GCA000160335_01532;Name=Methyltransferase;locus_tag=GCA000160335_01532;product=Methyltransferase;Parent=GCA000160335_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4976,COG:R,RefSeq:WP_000084835.1,SO:0001217,UniParc:UPI00003B1719,UniRef:UniRef100_A0A7Z7QZD4,UniRef:UniRef50_A0A2S6DNM9,UniRef:UniRef90_A0A2S6DNM9
contig_1	Pyrodigal	gene	1604047	1604400	.	-	.	ID=GCA000160335_01533_gene;locus_tag=GCA000160335_01533;gene=rsfS
contig_1	Pyrodigal	CDS	1604047	1604400	.	-	0	ID=GCA000160335_01533;Name=ribosome silencing factor;locus_tag=GCA000160335_01533;product=ribosome silencing factor;Dbxref=GO:0017148,GO:0043022;gene=rsfS;Parent=GCA000160335_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_001088020.1,SO:0001217,UniParc:UPI00000CA96B,UniRef:UniRef100_A0A7Z7QZN3,UniRef:UniRef50_Q2G298,UniRef:UniRef90_Q2G298
contig_1	Pyrodigal	gene	1604401	1604985	.	-	.	ID=GCA000160335_01534_gene;locus_tag=GCA000160335_01534;gene=nadD
contig_1	Pyrodigal	CDS	1604401	1604985	.	-	0	ID=GCA000160335_01534;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000160335_01534;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000166,GO:0000309,GO:0004515,GO:0005737,GO:0009435,GO:0016787,GO:0046872;gene=nadD;Parent=GCA000160335_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1713,COG:TR,RefSeq:WP_001019324.1,SO:0001217,UniParc:UPI00000D767A,UniRef:UniRef100_Q2G297,UniRef:UniRef50_Q2G297,UniRef:UniRef90_Q2G297;ec_number=3.6.1.41
contig_1	Pyrodigal	gene	1604975	1605544	.	-	.	ID=GCA000160335_01535_gene;locus_tag=GCA000160335_01535;gene=nadD
contig_1	Pyrodigal	CDS	1604975	1605544	.	-	0	ID=GCA000160335_01535;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000160335_01535;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000309,GO:0004515,GO:0005524,GO:0005737,GO:0009435;gene=nadD;Parent=GCA000160335_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1057,COG:H,RefSeq:WP_000822938.1,SO:0001217,UniParc:UPI00003B171B,UniRef:UniRef100_Q6GGA7,UniRef:UniRef50_Q2FXY3,UniRef:UniRef90_Q2FXY3;ec_number=2.7.7.18
contig_1	Pyrodigal	gene	1605547	1605837	.	-	.	ID=GCA000160335_01536_gene;locus_tag=GCA000160335_01536;gene=yhbY
contig_1	Pyrodigal	CDS	1605547	1605837	.	-	0	ID=GCA000160335_01536;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA000160335_01536;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA000160335_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_000955232.1,SO:0001217,UniParc:UPI00003B171C,UniRef:UniRef100_A0A7Z7QZX6,UniRef:UniRef50_C0ZB08,UniRef:UniRef90_Q2FXY2
contig_1	Pyrodigal	gene	1605841	1606647	.	-	.	ID=GCA000160335_01537_gene;locus_tag=GCA000160335_01537;gene=aroE
contig_1	Pyrodigal	CDS	1605841	1606647	.	-	0	ID=GCA000160335_01537;Name=Shikimate dehydrogenase (NADP(+));locus_tag=GCA000160335_01537;product=Shikimate dehydrogenase (NADP(+));Dbxref=GO:0004764,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0050661;gene=aroE;Parent=GCA000160335_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_000666750.1,SO:0001217,UniParc:UPI00003B171D,UniRef:UniRef100_Q6GGA5,UniRef:UniRef50_Q5HNV1,UniRef:UniRef90_Q2FXY1;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	1606661	1607761	.	-	.	ID=GCA000160335_01538_gene;locus_tag=GCA000160335_01538;gene=yqeH
contig_1	Pyrodigal	CDS	1606661	1607761	.	-	0	ID=GCA000160335_01538;Name=ribosome biogenesis GTPase YqeH;locus_tag=GCA000160335_01538;product=ribosome biogenesis GTPase YqeH;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=yqeH;Parent=GCA000160335_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_001280133.1,SO:0001217,UniParc:UPI00019F4D6A,UniRef:UniRef100_UPI00019F4D6A,UniRef:UniRef50_P54453,UniRef:UniRef90_Q2FXY0
contig_1	Pyrodigal	gene	1607762	1608289	.	-	.	ID=GCA000160335_01539_gene;locus_tag=GCA000160335_01539;gene=yqeG
contig_1	Pyrodigal	CDS	1607762	1608289	.	-	0	ID=GCA000160335_01539;Name=YqeG family HAD IIIA-type phosphatase;locus_tag=GCA000160335_01539;product=YqeG family HAD IIIA-type phosphatase;gene=yqeG;Parent=GCA000160335_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2179,COG:R,RefSeq:WP_000524902.1,SO:0001217,UniParc:UPI0000054297,UniRef:UniRef100_Q2FXX9,UniRef:UniRef50_Q2FXX9,UniRef:UniRef90_Q2FXX9
contig_1	Pyrodigal	gene	1608309	1608995	.	-	.	ID=GCA000160335_01540_gene;locus_tag=GCA000160335_01540;gene=mtnN
contig_1	Pyrodigal	CDS	1608309	1608995	.	-	0	ID=GCA000160335_01540;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA000160335_01540;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019284,GO:0019509;gene=mtnN;Parent=GCA000160335_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01243,RefSeq:WP_000579273.1,SO:0001217,UniParc:UPI00003B171F,UniRef:UniRef100_Q6GGA2,UniRef:UniRef50_Q4L6V0,UniRef:UniRef90_Q2FXX8;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	1609309	1609578	.	+	.	ID=GCA000160335_01541_gene;locus_tag=GCA000160335_01541
contig_1	Pyrodigal	CDS	1609309	1609578	.	+	0	ID=GCA000160335_01541;Name=hypothetical protein;locus_tag=GCA000160335_01541;product=hypothetical protein;Parent=GCA000160335_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829750.1,SO:0001217,UniParc:UPI0000054295,UniRef:UniRef100_Q2FXX6,UniRef:UniRef50_Q2FXX6,UniRef:UniRef90_Q2FXX6
contig_1	Pyrodigal	gene	1609780	1609968	.	-	.	ID=GCA000160335_01542_gene;locus_tag=GCA000160335_01542
contig_1	Pyrodigal	CDS	1609780	1609968	.	-	0	ID=GCA000160335_01542;Name=Toxin;locus_tag=GCA000160335_01542;product=Toxin;Parent=GCA000160335_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001D854D1,UniRef:UniRef100_A0A7Z7QZ79,UniRef:UniRef50_A0A380EL08,UniRef:UniRef90_A0A9P2YX46
contig_1	Pyrodigal	gene	1610029	1610532	.	-	.	ID=GCA000160335_01543_gene;locus_tag=GCA000160335_01543
contig_1	Pyrodigal	CDS	1610029	1610532	.	-	0	ID=GCA000160335_01543;Name=Enterotoxin;locus_tag=GCA000160335_01543;product=Enterotoxin;Parent=GCA000160335_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11040,SO:0001217,UniParc:UPI00019F4D69,UniRef:UniRef100_A0A7Z7QZP0,UniRef:UniRef50_A0A380DV49,UniRef:UniRef90_A0A7Z7QZP0
contig_1	Pyrodigal	gene	1611080	1612300	.	-	.	ID=GCA000160335_01544_gene;locus_tag=GCA000160335_01544
contig_1	Pyrodigal	CDS	1611080	1612300	.	-	0	ID=GCA000160335_01544;Name=Fido domain-containing protein;locus_tag=GCA000160335_01544;product=Fido domain-containing protein;Parent=GCA000160335_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3177,COG:K,RefSeq:WP_000542304.1,SO:0001217,UniParc:UPI00019F4D68,UniRef:UniRef100_UPI00019F4D68,UniRef:UniRef50_Q2FXX4,UniRef:UniRef90_Q2FXX4
contig_1	Pyrodigal	gene	1612590	1613822	.	-	.	ID=GCA000160335_01545_gene;locus_tag=GCA000160335_01545;gene=mntH
contig_1	Pyrodigal	CDS	1612590	1613822	.	-	0	ID=GCA000160335_01545;Name=Divalent metal cation transporter;locus_tag=GCA000160335_01545;product=Divalent metal cation transporter;gene=mntH;Parent=GCA000160335_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_000533224.1,SO:0001217,UniParc:UPI00019CD6B1,UniRef:UniRef100_A0A0E1X4T1,UniRef:UniRef50_Q5HNU7,UniRef:UniRef90_Q2FXX3
contig_1	Pyrodigal	gene	1613834	1614586	.	-	.	ID=GCA000160335_01546_gene;locus_tag=GCA000160335_01546;gene=pxpA
contig_1	Pyrodigal	CDS	1613834	1614586	.	-	0	ID=GCA000160335_01546;Name=5-oxoprolinase subunit PxpA;locus_tag=GCA000160335_01546;product=5-oxoprolinase subunit PxpA;Dbxref=GO:0003824,GO:0005524,GO:0005975,GO:0017168;gene=pxpA;Parent=GCA000160335_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1540,COG:E,RefSeq:WP_001261800.1,SO:0001217,UniParc:UPI00005FE552,UniRef:UniRef100_Q2YT73,UniRef:UniRef50_Q57RM2,UniRef:UniRef90_Q2FXX2;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1614586	1615947	.	-	.	ID=GCA000160335_01547_gene;locus_tag=GCA000160335_01547;gene=accC
contig_1	Pyrodigal	CDS	1614586	1615947	.	-	0	ID=GCA000160335_01547;Name=Acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000160335_01547;product=Acetyl-CoA carboxylase biotin carboxylase subunit;gene=accC;Parent=GCA000160335_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_000942749.1,SO:0001217,UniParc:UPI0001B70198,UniRef:UniRef100_UPI0001B70198,UniRef:UniRef50_A0A2T4PV93,UniRef:UniRef90_A0AAE8P885
contig_1	Pyrodigal	gene	1615961	1616410	.	-	.	ID=GCA000160335_01548_gene;locus_tag=GCA000160335_01548;gene=accB
contig_1	Pyrodigal	CDS	1615961	1616410	.	-	0	ID=GCA000160335_01548;Name=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;locus_tag=GCA000160335_01548;product=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;gene=accB;Parent=GCA000160335_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001019343.1,SO:0001217,UniParc:UPI00003B1724,UniRef:UniRef100_A0A7Z7QZZ0,UniRef:UniRef50_A0A380FYW2,UniRef:UniRef90_A0A2W2SQL9
contig_1	Pyrodigal	gene	1616412	1617422	.	-	.	ID=GCA000160335_01549_gene;locus_tag=GCA000160335_01549;gene=pxpC
contig_1	Pyrodigal	CDS	1616412	1617422	.	-	0	ID=GCA000160335_01549;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000160335_01549;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000160335_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000023330.1,SO:0001217,UniParc:UPI00003B1725,UniRef:UniRef100_A0A7Z7W1V1,UniRef:UniRef50_Q2FXW9,UniRef:UniRef90_Q2FXW9
contig_1	Pyrodigal	gene	1617412	1618146	.	-	.	ID=GCA000160335_01550_gene;locus_tag=GCA000160335_01550;gene=pxpB
contig_1	Pyrodigal	CDS	1617412	1618146	.	-	0	ID=GCA000160335_01550;Name=5-oxoprolinase subunit PxpB;locus_tag=GCA000160335_01550;product=5-oxoprolinase subunit PxpB;Dbxref=GO:0005975,GO:0008152,GO:0017168;gene=pxpB;Parent=GCA000160335_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000383173.1,SO:0001217,UniParc:UPI00003B1726,UniRef:UniRef100_A0A7Z7W1Z1,UniRef:UniRef50_A0A9X0PF13,UniRef:UniRef90_W8U5F9;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1618472	1618948	.	-	.	ID=GCA000160335_01551_gene;locus_tag=GCA000160335_01551;gene=greA
contig_1	Pyrodigal	CDS	1618472	1618948	.	-	0	ID=GCA000160335_01551;Name=transcription elongation factor GreA;locus_tag=GCA000160335_01551;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greA;Parent=GCA000160335_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_000431312.1,SO:0001217,UniParc:UPI000005428C,UniRef:UniRef100_Q2FXW7,UniRef:UniRef50_Q2FXW7,UniRef:UniRef90_Q2FXW7
contig_1	Pyrodigal	gene	1618976	1619599	.	-	.	ID=GCA000160335_01552_gene;locus_tag=GCA000160335_01552;gene=udk
contig_1	Pyrodigal	CDS	1618976	1619599	.	-	0	ID=GCA000160335_01552;Name=uridine kinase;locus_tag=GCA000160335_01552;product=uridine kinase;Dbxref=GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211;gene=udk;Parent=GCA000160335_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,RefSeq:WP_000648617.1,SO:0001217,UniParc:UPI000005428B,UniRef:UniRef100_Q2FXW6,UniRef:UniRef50_Q9KDD8,UniRef:UniRef90_Q2FXW6;ec_number=2.7.1.48
contig_1	Pyrodigal	gene	1619599	1620867	.	-	.	ID=GCA000160335_01553_gene;locus_tag=GCA000160335_01553;gene=rlhA
contig_1	Pyrodigal	CDS	1619599	1620867	.	-	0	ID=GCA000160335_01553;Name=Peptidase family U32 C-terminal domain-containing protein;locus_tag=GCA000160335_01553;product=Peptidase family U32 C-terminal domain-containing protein;gene=rlhA;Parent=GCA000160335_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_000848304.1,SO:0001217,UniParc:UPI000005428A,UniRef:UniRef100_Q2FXW5,UniRef:UniRef50_O32034,UniRef:UniRef90_Q2FXW5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1620879	1621802	.	-	.	ID=GCA000160335_01554_gene;locus_tag=GCA000160335_01554;gene=rlhA
contig_1	Pyrodigal	CDS	1620879	1621802	.	-	0	ID=GCA000160335_01554;Name=Peptidase U32 family protein;locus_tag=GCA000160335_01554;product=Peptidase U32 family protein;gene=rlhA;Parent=GCA000160335_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,RefSeq:WP_000137775.1,SO:0001217,UniParc:UPI00000D9E6B,UniRef:UniRef100_Q2FXW4,UniRef:UniRef50_O32035,UniRef:UniRef90_A0A389PYG2
contig_1	Pyrodigal	gene	1621805	1622443	.	-	.	ID=GCA000160335_01555_gene;locus_tag=GCA000160335_01555;gene=trmR
contig_1	Pyrodigal	CDS	1621805	1622443	.	-	0	ID=GCA000160335_01555;Name=tRNA 5-hydroxyuridine methyltransferase;locus_tag=GCA000160335_01555;product=tRNA 5-hydroxyuridine methyltransferase;gene=trmR;Parent=GCA000160335_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4122,COG:J,RefSeq:WP_000342261.1,SO:0001217,UniParc:UPI00019F4D4E,UniRef:UniRef100_A0A7Z7QZQ5,UniRef:UniRef50_A0A2A1K8K5,UniRef:UniRef90_A0A6B1RN35
contig_1	Pyrodigal	gene	1622728	1623036	.	-	.	ID=GCA000160335_01556_gene;locus_tag=GCA000160335_01556;gene=yrzB
contig_1	Pyrodigal	CDS	1622728	1623036	.	-	0	ID=GCA000160335_01556;Name=UPF0473 protein SAOUHSC_01719;locus_tag=GCA000160335_01556;product=UPF0473 protein SAOUHSC_01719;gene=yrzB;Parent=GCA000160335_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3906,COG:S,RefSeq:WP_000134779.1,SO:0001217,UniParc:UPI0000054287,UniRef:UniRef100_Q2FXW2,UniRef:UniRef50_Q2FXW2,UniRef:UniRef90_Q2FXW2
contig_1	Pyrodigal	gene	1623051	1623479	.	-	.	ID=GCA000160335_01557_gene;locus_tag=GCA000160335_01557;gene=ruvX
contig_1	Pyrodigal	CDS	1623051	1623479	.	-	0	ID=GCA000160335_01557;Name=Holliday junction resolvase RuvX;locus_tag=GCA000160335_01557;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005829,GO:0006364;gene=ruvX;Parent=GCA000160335_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_000939059.1,SO:0001217,UniParc:UPI0000054286,UniRef:UniRef100_Q2FXW1,UniRef:UniRef50_Q2FXW1,UniRef:UniRef90_Q2FXW1;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1623483	1623743	.	-	.	ID=GCA000160335_01558_gene;locus_tag=GCA000160335_01558;gene=ireB
contig_1	Pyrodigal	CDS	1623483	1623743	.	-	0	ID=GCA000160335_01558;Name=IreB family regulatory phosphoprotein;locus_tag=GCA000160335_01558;product=IreB family regulatory phosphoprotein;gene=ireB;Parent=GCA000160335_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4472,COG:S,RefSeq:WP_000426912.1,SO:0001217,UniParc:UPI00000D778B,UniRef:UniRef100_Q2FXW0,UniRef:UniRef50_Q7WY61,UniRef:UniRef90_Q2FXW0
contig_1	Pyrodigal	gene	1623806	1626439	.	-	.	ID=GCA000160335_01559_gene;locus_tag=GCA000160335_01559;gene=alaS
contig_1	Pyrodigal	CDS	1623806	1626439	.	-	0	ID=GCA000160335_01559;Name=alanine--tRNA ligase;locus_tag=GCA000160335_01559;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0016740;gene=alaS;Parent=GCA000160335_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,SO:0001217,UniParc:UPI00019CD6B6,UniRef:UniRef100_Q6GG85,UniRef:UniRef50_Q03ER8,UniRef:UniRef90_Q2FXV9;ec_number=6.1.1.7
contig_1	Infernal	regulatory_region	1626568	1626745	4.6e-13	-	.	ID=HBCHLJIIAO_163;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1626779	1629256	.	-	.	ID=GCA000160335_01560_gene;locus_tag=GCA000160335_01560;gene=recD
contig_1	Pyrodigal	CDS	1626779	1629256	.	-	0	ID=GCA000160335_01560;Name=ATP-dependent RecD2 DNA helicase;locus_tag=GCA000160335_01560;product=ATP-dependent RecD2 DNA helicase;gene=recD;Parent=GCA000160335_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_001283316.1,SO:0001217,UniParc:UPI00003B1729,UniRef:UniRef100_A0AAJ4YV87,UniRef:UniRef50_A0A654AZ37,UniRef:UniRef90_Q2FXV8
contig_1	Pyrodigal	gene	1629258	1629926	.	-	.	ID=GCA000160335_01561_gene;locus_tag=GCA000160335_01561;gene=tPR
contig_1	Pyrodigal	CDS	1629258	1629926	.	-	0	ID=GCA000160335_01561;Name=Tetratricopeptide repeat protein;locus_tag=GCA000160335_01561;product=Tetratricopeptide repeat protein;gene=tPR;Parent=GCA000160335_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0457,COG:R,RefSeq:WP_000567025.1,SO:0001217,UniParc:UPI00019CD6F3,UniRef:UniRef100_A0A7Z7R033,UniRef:UniRef50_A0A2A1KA84,UniRef:UniRef90_A0A7Z1N2M0
contig_1	Infernal	gene	1630138	1630351	.	+	.	ID=GCA000160335_01562_gene;locus_tag=GCA000160335_01562;gene=S35
contig_1	Infernal	ncRNA	1630138	1630351	5.3e-10	+	.	ID=GCA000160335_01562;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01562;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01562_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1630608	1631726	.	-	.	ID=GCA000160335_01563_gene;locus_tag=GCA000160335_01563;gene=mnmA
contig_1	Pyrodigal	CDS	1630608	1631726	.	-	0	ID=GCA000160335_01563;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000160335_01563;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0005524,GO:0005737,GO:0008033,GO:0016740,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000160335_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_000066097.1,SO:0001217,UniParc:UPI000013748D,UniRef:UniRef100_Q2FXV6,UniRef:UniRef50_Q97T38,UniRef:UniRef90_Q2FXV6;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	1631727	1632869	.	-	.	ID=GCA000160335_01564_gene;locus_tag=GCA000160335_01564;gene=nifS
contig_1	Pyrodigal	CDS	1631727	1632869	.	-	0	ID=GCA000160335_01564;Name=cysteine desulfurase;locus_tag=GCA000160335_01564;product=cysteine desulfurase;gene=nifS;Parent=GCA000160335_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_000409167.1,SO:0001217,UniParc:UPI000005427F,UniRef:UniRef100_Q2FXV4,UniRef:UniRef50_A0A391MGC8,UniRef:UniRef90_A0A391MGC8;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1633179	1634192	.	+	.	ID=GCA000160335_01565_gene;locus_tag=GCA000160335_01565;gene=ssuD
contig_1	Pyrodigal	CDS	1633179	1634192	.	+	0	ID=GCA000160335_01565;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000160335_01565;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000160335_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000985898.1,SO:0001217,UniParc:UPI00003B172B,UniRef:UniRef100_A0A0E1X734,UniRef:UniRef50_A0A0D6HHK7,UniRef:UniRef90_A0A0D6HHK7
contig_1	Pyrodigal	gene	1634429	1634575	.	-	.	ID=GCA000160335_01566_gene;locus_tag=GCA000160335_01566
contig_1	Pyrodigal	CDS	1634429	1634575	.	-	0	ID=GCA000160335_01566;Name=SAS049 family protein;locus_tag=GCA000160335_01566;product=SAS049 family protein;Parent=GCA000160335_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000008061.1,SO:0001217,UniParc:UPI00003B172C,UniRef:UniRef100_A0A7Z7W290,UniRef:UniRef50_A0A7Z0RRV6,UniRef:UniRef90_Q2FXV2
contig_1	Pyrodigal	gene	1634615	1634797	.	-	.	ID=GCA000160335_01567_gene;locus_tag=GCA000160335_01567;gene=yjbJ
contig_1	Pyrodigal	CDS	1634615	1634797	.	-	0	ID=GCA000160335_01567;Name=UPF0337 protein SAS1561;locus_tag=GCA000160335_01567;product=UPF0337 protein SAS1561;gene=yjbJ;Parent=GCA000160335_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752909.1,SO:0001217,UniParc:UPI000005427C,UniRef:UniRef100_Q2FXV1,UniRef:UniRef50_Q2FXV1,UniRef:UniRef90_Q2FXV1
contig_1	Pyrodigal	gene	1634897	1635319	.	-	.	ID=GCA000160335_01568_gene;locus_tag=GCA000160335_01568;gene=cymR
contig_1	Pyrodigal	CDS	1634897	1635319	.	-	0	ID=GCA000160335_01568;Name=cysteine metabolism transcriptional regulator CymR;locus_tag=GCA000160335_01568;product=cysteine metabolism transcriptional regulator CymR;gene=cymR;Parent=GCA000160335_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,KEGG:K17472,RefSeq:WP_000704122.1,SO:0001217,UniParc:UPI00000D7899,UniRef:UniRef100_A0A7Z7W340,UniRef:UniRef50_B9E703,UniRef:UniRef90_A0A2X2K6J6
contig_1	Pyrodigal	gene	1635404	1636678	.	+	.	ID=GCA000160335_01569_gene;locus_tag=GCA000160335_01569;gene=rarA
contig_1	Pyrodigal	CDS	1635404	1636678	.	+	0	ID=GCA000160335_01569;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000160335_01569;product=AAA+ ATPase domain-containing protein;gene=rarA;Parent=GCA000160335_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2256,COG:L,KEGG:K07478,RefSeq:WP_000102741.1,SO:0001217,UniParc:UPI00003B172D,UniRef:UniRef100_A0AAJ5CS09,UniRef:UniRef50_O34528,UniRef:UniRef90_Q2FXU8
contig_1	Pyrodigal	gene	1636839	1637612	.	-	.	ID=GCA000160335_01570_gene;locus_tag=GCA000160335_01570;gene=tcdA
contig_1	Pyrodigal	CDS	1636839	1637612	.	-	0	ID=GCA000160335_01570;Name=HesA/moeB/thiF family protein;locus_tag=GCA000160335_01570;product=HesA/moeB/thiF family protein;gene=tcdA;Parent=GCA000160335_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_000682640.1,SO:0001217,UniParc:UPI00003B172E,UniRef:UniRef100_A0A7Z7QZR6,UniRef:UniRef50_A0A2S5CXU7,UniRef:UniRef90_A0A077UH91
contig_1	Infernal	gene	1637805	1637995	.	-	.	ID=GCA000160335_01571_gene;locus_tag=GCA000160335_01571;gene=6S
contig_1	Infernal	ncRNA	1637805	1637995	1.7e-16	-	.	ID=GCA000160335_01571;Name=6S / SsrS RNA;locus_tag=GCA000160335_01571;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA000160335_01571_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013
contig_1	Pyrodigal	gene	1638073	1639839	.	-	.	ID=GCA000160335_01572_gene;locus_tag=GCA000160335_01572;gene=aspS
contig_1	Pyrodigal	CDS	1638073	1639839	.	-	0	ID=GCA000160335_01572;Name=aspartate--tRNA ligase;locus_tag=GCA000160335_01572;product=aspartate--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006418,GO:0006422,GO:0016740,GO:0016874;gene=aspS;Parent=GCA000160335_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,RefSeq:WP_000044793.1,SO:0001217,UniParc:UPI0001B70026,UniRef:UniRef100_UPI0001B70026,UniRef:UniRef50_A9KIA6,UniRef:UniRef90_Q2FXU5;ec_number=6.1.1.12
contig_1	Pyrodigal	gene	1639855	1641117	.	-	.	ID=GCA000160335_01573_gene;locus_tag=GCA000160335_01573;gene=hisS
contig_1	Pyrodigal	CDS	1639855	1641117	.	-	0	ID=GCA000160335_01573;Name=histidine--tRNA ligase;locus_tag=GCA000160335_01573;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427,GO:0016740;gene=hisS;Parent=GCA000160335_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_000590826.1,SO:0001217,UniParc:UPI000002FBCF,UniRef:UniRef100_Q2FXU4,UniRef:UniRef50_O32039,UniRef:UniRef90_Q2FXU4;ec_number=6.1.1.21
contig_1	Pyrodigal	gene	1641578	1642453	.	-	.	ID=GCA000160335_01574_gene;locus_tag=GCA000160335_01574;gene=lytH
contig_1	Pyrodigal	CDS	1641578	1642453	.	-	0	ID=GCA000160335_01574;Name=putative cell wall amidase LytH;locus_tag=GCA000160335_01574;product=putative cell wall amidase LytH;Dbxref=GO:0005576,GO:0008745,GO:0009253,GO:0030288,GO:0071555;gene=lytH;Parent=GCA000160335_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0860,COG:M,KEGG:K01448,RefSeq:WP_000717800.1,SO:0001217,UniParc:UPI0000054273,UniRef:UniRef100_Q2FXU3,UniRef:UniRef50_Q2FXU3,UniRef:UniRef90_Q2FXU3;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	1642450	1642902	.	-	.	ID=GCA000160335_01575_gene;locus_tag=GCA000160335_01575;gene=dtd
contig_1	Pyrodigal	CDS	1642450	1642902	.	-	0	ID=GCA000160335_01575;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000160335_01575;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000160335_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_000869979.1,SO:0001217,UniParc:UPI00003B1730,UniRef:UniRef100_Q6GG71,UniRef:UniRef50_Q2FXU2,UniRef:UniRef90_Q2FXU2;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	1642914	1645124	.	-	.	ID=GCA000160335_01576_gene;locus_tag=GCA000160335_01576;gene=relA
contig_1	Pyrodigal	CDS	1642914	1645124	.	-	0	ID=GCA000160335_01576;Name=GTP pyrophosphokinase;locus_tag=GCA000160335_01576;product=GTP pyrophosphokinase;Dbxref=GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0015970,GO:0016301;gene=relA;Parent=GCA000160335_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,SO:0001217,UniParc:UPI0000054270,UniRef:UniRef100_Q6GG70,UniRef:UniRef50_Q931Q4,UniRef:UniRef90_Q6GG70;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	1645531	1646049	.	-	.	ID=GCA000160335_01577_gene;locus_tag=GCA000160335_01577;gene=apt
contig_1	Pyrodigal	CDS	1645531	1646049	.	-	0	ID=GCA000160335_01577;Name=adenine phosphoribosyltransferase;locus_tag=GCA000160335_01577;product=adenine phosphoribosyltransferase;Dbxref=GO:0002055,GO:0003999,GO:0005737,GO:0006166,GO:0006168,GO:0009116,GO:0016208,GO:0044209;gene=apt;Parent=GCA000160335_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,RefSeq:WP_000364542.1,SO:0001217,UniParc:UPI000005426F,UniRef:UniRef100_Q2FXU0,UniRef:UniRef50_Q1G9R7,UniRef:UniRef90_Q2FXU0;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	1646071	1648344	.	-	.	ID=GCA000160335_01578_gene;locus_tag=GCA000160335_01578;gene=recJ
contig_1	Pyrodigal	CDS	1646071	1648344	.	-	0	ID=GCA000160335_01578;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA000160335_01578;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA000160335_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4199,COG:L,KEGG:K07462,RefSeq:WP_000595001.1,SO:0001217,UniParc:UPI00003B1731,UniRef:UniRef100_A0A7Z7R046,UniRef:UniRef50_A0AAP8TSV1,UniRef:UniRef90_A0A390R1U9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1648547	1650826	.	-	.	ID=GCA000160335_01579_gene;locus_tag=GCA000160335_01579;gene=secDF
contig_1	Pyrodigal	CDS	1648547	1650826	.	-	0	ID=GCA000160335_01579;Name=protein translocase subunit SecDF;locus_tag=GCA000160335_01579;product=protein translocase subunit SecDF;gene=secDF;Parent=GCA000160335_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,RefSeq:WP_000749802.1,SO:0001217,UniParc:UPI00003B1732,UniRef:UniRef100_A0A7Z7R015,UniRef:UniRef50_B9E715,UniRef:UniRef90_W8UA89
contig_1	Pyrodigal	gene	1651077	1652723	.	-	.	ID=GCA000160335_01580_gene;locus_tag=GCA000160335_01580;gene=tnp
contig_1	Pyrodigal	CDS	1651077	1652723	.	-	0	ID=GCA000160335_01580;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_01580;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277741.1,SO:0001217,UniParc:UPI00003B165B,UniRef:UniRef100_A0A7Z7QYN2,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	1652713	1652938	.	+	.	ID=GCA000160335_01581_gene;locus_tag=GCA000160335_01581;gene=tsr24
contig_1	Infernal	ncRNA	1652713	1652938	1.1e-28	+	.	ID=GCA000160335_01581;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_01581;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_01581_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1653022	1653282	.	-	.	ID=GCA000160335_01582_gene;locus_tag=GCA000160335_01582;gene=yajC
contig_1	Pyrodigal	CDS	1653022	1653282	.	-	0	ID=GCA000160335_01582;Name=preprotein translocase subunit YajC;locus_tag=GCA000160335_01582;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015450;gene=yajC;Parent=GCA000160335_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_001160682.1,SO:0001217,UniParc:UPI000005426C,UniRef:UniRef100_Q2FXT7,UniRef:UniRef50_B9DNG6,UniRef:UniRef90_A0A2K4AGL2
contig_1	Pyrodigal	gene	1653301	1654440	.	-	.	ID=GCA000160335_01583_gene;locus_tag=GCA000160335_01583;gene=tgt
contig_1	Pyrodigal	CDS	1653301	1654440	.	-	0	ID=GCA000160335_01583;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA000160335_01583;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA000160335_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_001112045.1,SO:0001217,UniParc:UPI0000136CFD,UniRef:UniRef100_Q2FXT6,UniRef:UniRef50_O32053,UniRef:UniRef90_Q2FXT6;ec_number=2.4.2.29
contig_1	Pyrodigal	gene	1654463	1655488	.	-	.	ID=GCA000160335_01584_gene;locus_tag=GCA000160335_01584;gene=queA
contig_1	Pyrodigal	CDS	1654463	1655488	.	-	0	ID=GCA000160335_01584;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA000160335_01584;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0002099,GO:0005737,GO:0008616,GO:0016740,GO:0016853,GO:0051075;gene=queA;Parent=GCA000160335_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_001019169.1,SO:0001217,UniParc:UPI0001B70028,UniRef:UniRef100_UPI0001B70028,UniRef:UniRef50_A8AYK5,UniRef:UniRef90_Q2FXT5;ec_number=2.4.99.17
contig_1	Pyrodigal	gene	1655490	1656494	.	-	.	ID=GCA000160335_01585_gene;locus_tag=GCA000160335_01585;gene=ruvB
contig_1	Pyrodigal	CDS	1655490	1656494	.	-	0	ID=GCA000160335_01585;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000160335_01585;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000160335_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_001005767.1,SO:0001217,UniParc:UPI0000054269,UniRef:UniRef100_Q2FXT4,UniRef:UniRef50_O32055,UniRef:UniRef90_Q2FXT4;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1656526	1657128	.	-	.	ID=GCA000160335_01586_gene;locus_tag=GCA000160335_01586;gene=ruvA
contig_1	Pyrodigal	CDS	1656526	1657128	.	-	0	ID=GCA000160335_01586;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000160335_01586;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000160335_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_000271546.1,SO:0001217,UniParc:UPI00003B1733,UniRef:UniRef100_Q6GG62,UniRef:UniRef50_Q2FXT3,UniRef:UniRef90_Q2FXT3;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1657142	1657600	.	-	.	ID=GCA000160335_01587_gene;locus_tag=GCA000160335_01587;gene=pheB
contig_1	Pyrodigal	CDS	1657142	1657600	.	-	0	ID=GCA000160335_01587;Name=ACT domain-containing protein;locus_tag=GCA000160335_01587;product=ACT domain-containing protein;gene=pheB;Parent=GCA000160335_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4492,COG:R,KEGG:K06209,RefSeq:WP_001548994.1,SO:0001217,UniParc:UPI0000054266,UniRef:UniRef100_Q2FXT2,UniRef:UniRef50_Q2FXT2,UniRef:UniRef90_Q2FXT2;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1657610	1658902	.	-	.	ID=GCA000160335_01588_gene;locus_tag=GCA000160335_01588;gene=obgE
contig_1	Pyrodigal	CDS	1657610	1658902	.	-	0	ID=GCA000160335_01588;Name=GTPase ObgE;locus_tag=GCA000160335_01588;product=GTPase ObgE;Dbxref=GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=obgE;Parent=GCA000160335_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0536,COG:DL,RefSeq:WP_000496098.1,SO:0001217,UniParc:UPI00003B1734,UniRef:UniRef100_Q6GG60,UniRef:UniRef50_P20964,UniRef:UniRef90_Q2FXT1;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1659389	1659673	.	-	.	ID=GCA000160335_01589_gene;locus_tag=GCA000160335_01589;gene=rpmA
contig_1	Pyrodigal	CDS	1659389	1659673	.	-	0	ID=GCA000160335_01589;Name=50S ribosomal protein L27;locus_tag=GCA000160335_01589;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000160335_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_000916187.1,SO:0001217,UniParc:UPI0000133E1A,UniRef:UniRef100_Q2FXT0,UniRef:UniRef50_Q2FXT0,UniRef:UniRef90_Q2FXT0
contig_1	Pyrodigal	gene	1659685	1660005	.	-	.	ID=GCA000160335_01590_gene;locus_tag=GCA000160335_01590;gene=prp
contig_1	Pyrodigal	CDS	1659685	1660005	.	-	0	ID=GCA000160335_01590;Name=Ribosomal processing cysteine protease Prp;locus_tag=GCA000160335_01590;product=Ribosomal processing cysteine protease Prp;Dbxref=GO:0006508,GO:0008234,GO:0042254;gene=prp;Parent=GCA000160335_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2868,COG:S,KEGG:K07584,RefSeq:WP_000633692.1,SO:0001217,UniParc:UPI0000054263,UniRef:UniRef100_Q2FXS9,UniRef:UniRef50_Q2FXS9,UniRef:UniRef90_Q2FXS9;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	1660081	1660320	.	-	.	ID=GCA000160335_01591_gene;locus_tag=GCA000160335_01591
contig_1	Pyrodigal	CDS	1660081	1660320	.	-	0	ID=GCA000160335_01591;Name=50S ribosomal protein L21;locus_tag=GCA000160335_01591;product=50S ribosomal protein L21;Parent=GCA000160335_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_W7BRP1
contig_1	Pyrodigal	gene	1660613	1661143	.	-	.	ID=GCA000160335_01592_gene;locus_tag=GCA000160335_01592;gene=mreD
contig_1	Pyrodigal	CDS	1660613	1661143	.	-	0	ID=GCA000160335_01592;Name=rod shape-determining protein MreD;locus_tag=GCA000160335_01592;product=rod shape-determining protein MreD;Dbxref=GO:0008360,GO:0016020;gene=mreD;Parent=GCA000160335_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_001259929.1,SO:0001217,UniParc:UPI00003B1735,UniRef:UniRef100_A0A7Z7QZH3,UniRef:UniRef50_A0A0D0RNW4,UniRef:UniRef90_A0A0U1MP65
contig_1	Pyrodigal	gene	1661143	1661985	.	-	.	ID=GCA000160335_01593_gene;locus_tag=GCA000160335_01593;gene=mreC
contig_1	Pyrodigal	CDS	1661143	1661985	.	-	0	ID=GCA000160335_01593;Name=rod shape-determining protein MreC;locus_tag=GCA000160335_01593;product=rod shape-determining protein MreC;Dbxref=GO:0008360;gene=mreC;Parent=GCA000160335_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_000911041.1,SO:0001217,UniParc:UPI00000D78B1,UniRef:UniRef100_Q2FXS6,UniRef:UniRef50_A0A0H2VGM0,UniRef:UniRef90_D7URR5
contig_1	Pyrodigal	gene	1662378	1662851	.	-	.	ID=GCA000160335_01594_gene;locus_tag=GCA000160335_01594
contig_1	Pyrodigal	CDS	1662378	1662851	.	-	0	ID=GCA000160335_01594;Name=DUF4930 domain-containing protein;locus_tag=GCA000160335_01594;product=DUF4930 domain-containing protein;Parent=GCA000160335_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001236733.1,SO:0001217,UniParc:UPI00003B1737,UniRef:UniRef100_A0A7Z7QZ90,UniRef:UniRef50_A0A1J3ZXU8,UniRef:UniRef90_Q2FXS4
contig_1	Pyrodigal	gene	1663324	1663608	.	-	.	ID=GCA000160335_01595_gene;locus_tag=GCA000160335_01595
contig_1	Pyrodigal	CDS	1663324	1663608	.	-	0	ID=GCA000160335_01595;Name=MW1603 protein;locus_tag=GCA000160335_01595;product=MW1603 protein;Parent=GCA000160335_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171861.1,SO:0001217,UniParc:UPI00019CD73B,UniRef:UniRef100_A0A7Z7R021,UniRef:UniRef50_Q2FXS3,UniRef:UniRef90_Q2FXS3
contig_1	Pyrodigal	gene	1663676	1664362	.	-	.	ID=GCA000160335_01596_gene;locus_tag=GCA000160335_01596;gene=radC
contig_1	Pyrodigal	CDS	1663676	1664362	.	-	0	ID=GCA000160335_01596;Name=DNA repair protein RadC;locus_tag=GCA000160335_01596;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281,GO:0006508,GO:0008237,GO:0046872;gene=radC;Parent=GCA000160335_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_000692886.1,SO:0001217,UniParc:UPI00019F4D35,UniRef:UniRef100_A0A7Z7W1W7,UniRef:UniRef50_P31337,UniRef:UniRef90_P31337
contig_1	Pyrodigal	gene	1664359	1665066	.	-	.	ID=GCA000160335_01597_gene;locus_tag=GCA000160335_01597;gene=gspO
contig_1	Pyrodigal	CDS	1664359	1665066	.	-	0	ID=GCA000160335_01597;Name=Prepilin peptidase A24 N-terminal domain-containing protein;locus_tag=GCA000160335_01597;product=Prepilin peptidase A24 N-terminal domain-containing protein;gene=gspO;Parent=GCA000160335_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1989,COG:NU,RefSeq:WP_000261106.1,SO:0001217,UniParc:UPI00003B173A,UniRef:UniRef100_A0A7Z7W208,UniRef:UniRef50_A0A077UH67,UniRef:UniRef90_Q2FXS1
contig_1	Pyrodigal	gene	1665327	1666598	.	-	.	ID=GCA000160335_01598_gene;locus_tag=GCA000160335_01598;gene=folC
contig_1	Pyrodigal	CDS	1665327	1666598	.	-	0	ID=GCA000160335_01598;Name=tetrahydrofolate synthase;locus_tag=GCA000160335_01598;product=tetrahydrofolate synthase;gene=folC;Parent=GCA000160335_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_001108339.1,SO:0001217,UniParc:UPI00003B173B,UniRef:UniRef100_A0A7Z7W2A3,UniRef:UniRef50_Q2FXR9,UniRef:UniRef90_Q2FXR9
contig_1	Pyrodigal	gene	1666611	1669241	.	-	.	ID=GCA000160335_01599_gene;locus_tag=GCA000160335_01599;gene=valS
contig_1	Pyrodigal	CDS	1666611	1669241	.	-	0	ID=GCA000160335_01599;Name=valine--tRNA ligase;locus_tag=GCA000160335_01599;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004832,GO:0005524,GO:0005829,GO:0006438;gene=valS;Parent=GCA000160335_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,RefSeq:WP_000425358.1,SO:0001217,UniParc:UPI00019CD73D,UniRef:UniRef100_A0A7Z7W1V9,UniRef:UniRef50_P11931,UniRef:UniRef90_Q2FXR8;ec_number=6.1.1.9
contig_1	Infernal	regulatory_region	1669285	1669586	4.3e-14	-	.	ID=HBCHLJIIAO_158;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1669644	1670204	.	+	.	ID=GCA000160335_01600_gene;locus_tag=GCA000160335_01600;gene=tag
contig_1	Pyrodigal	CDS	1669644	1670204	.	+	0	ID=GCA000160335_01600;Name=DNA-3-methyladenine glycosylase I;locus_tag=GCA000160335_01600;product=DNA-3-methyladenine glycosylase I;gene=tag;Parent=GCA000160335_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2818,COG:L,KEGG:K01246,RefSeq:WP_001001231.1,SO:0001217,UniParc:UPI0001B7002A,UniRef:UniRef100_UPI0001B7002A,UniRef:UniRef50_Q2FXR7,UniRef:UniRef90_Q2FXR7;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	1670427	1671494	.	-	.	ID=GCA000160335_01601_gene;locus_tag=GCA000160335_01601;gene=abrB
contig_1	Pyrodigal	CDS	1670427	1671494	.	-	0	ID=GCA000160335_01601;Name=AbrB family transcriptional regulator;locus_tag=GCA000160335_01601;product=AbrB family transcriptional regulator;gene=abrB;Parent=GCA000160335_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3180,COG:R,KEGG:K07120,SO:0001217,UniParc:UPI0001F23B09,UniRef:UniRef100_A0A7U7EVB6,UniRef:UniRef50_Q2FXR6,UniRef:UniRef90_Q2FXR6
contig_1	Pyrodigal	gene	1671723	1672982	.	-	.	ID=GCA000160335_01602_gene;locus_tag=GCA000160335_01602;gene=hemL
contig_1	Pyrodigal	CDS	1671723	1672982	.	-	0	ID=GCA000160335_01602;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000160335_01602;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL;Parent=GCA000160335_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,SO:0001217,UniRef:UniRef50_Q2S1S3,UniRef:UniRef90_Q2FXR4;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	1673030	1674004	.	-	.	ID=GCA000160335_01603_gene;locus_tag=GCA000160335_01603;gene=hemB
contig_1	Pyrodigal	CDS	1673030	1674004	.	-	0	ID=GCA000160335_01603;Name=porphobilinogen synthase;locus_tag=GCA000160335_01603;product=porphobilinogen synthase;Dbxref=GO:0003824,GO:0004655,GO:0005829,GO:0006782,GO:0008270,GO:0033014,GO:0046872;gene=hemB;Parent=GCA000160335_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0113,COG:H,KEGG:K01698,RefSeq:WP_000667126.1,SO:0001217,UniParc:UPI0000054C1A,UniRef:UniRef100_Q2FXR3,UniRef:UniRef50_Q2FXR3,UniRef:UniRef90_Q2FXR3;ec_number=4.2.1.24
contig_1	Pyrodigal	gene	1674007	1674675	.	-	.	ID=GCA000160335_01604_gene;locus_tag=GCA000160335_01604;gene=hemD
contig_1	Pyrodigal	CDS	1674007	1674675	.	-	0	ID=GCA000160335_01604;Name=Uroporphyrinogen-III synthase;locus_tag=GCA000160335_01604;product=Uroporphyrinogen-III synthase;gene=hemD;Parent=GCA000160335_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1587,COG:H,RefSeq:WP_000805946.1,SO:0001217,UniParc:UPI00003B1740,UniRef:UniRef100_A0A7Z7QZ66,UniRef:UniRef50_Q5HNN4,UniRef:UniRef90_A0A390VSB3
contig_1	Pyrodigal	gene	1674697	1675623	.	-	.	ID=GCA000160335_01605_gene;locus_tag=GCA000160335_01605;gene=hemC
contig_1	Pyrodigal	CDS	1674697	1675623	.	-	0	ID=GCA000160335_01605;Name=hydroxymethylbilane synthase;locus_tag=GCA000160335_01605;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0005737,GO:0006782,GO:0033014;gene=hemC;Parent=GCA000160335_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,RefSeq:WP_001230225.1,SO:0001217,UniParc:UPI00003B1741,UniRef:UniRef100_Q6GG35,UniRef:UniRef50_O34090,UniRef:UniRef90_O34090;ec_number=2.5.1.61
contig_1	Pyrodigal	gene	1675665	1676480	.	-	.	ID=GCA000160335_01606_gene;locus_tag=GCA000160335_01606;gene=ccmC
contig_1	Pyrodigal	CDS	1675665	1676480	.	-	0	ID=GCA000160335_01606;Name=Cytochrome c assembly protein domain-containing protein;locus_tag=GCA000160335_01606;product=Cytochrome c assembly protein domain-containing protein;gene=ccmC;Parent=GCA000160335_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0755,COG:O,KEGG:K02497,RefSeq:WP_001157326.1,SO:0001217,UniParc:UPI00003B1742,UniRef:UniRef100_A0A7Z7QZI1,UniRef:UniRef50_Q2FXR0,UniRef:UniRef90_Q2FXR0
contig_1	Pyrodigal	gene	1676502	1677848	.	-	.	ID=GCA000160335_01607_gene;locus_tag=GCA000160335_01607;gene=hemA
contig_1	Pyrodigal	CDS	1676502	1677848	.	-	0	ID=GCA000160335_01607;Name=glutamyl-tRNA reductase;locus_tag=GCA000160335_01607;product=glutamyl-tRNA reductase;Dbxref=GO:0006782,GO:0008883,GO:0050661;gene=hemA;Parent=GCA000160335_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0373,COG:H,KEGG:K02492,RefSeq:WP_000545456.1,SO:0001217,UniParc:UPI0001B70058,UniRef:UniRef100_A0A0E1X702,UniRef:UniRef50_Q65GJ9,UniRef:UniRef90_Q2FXQ9;ec_number=1.2.1.70
contig_1	Pyrodigal	gene	1678065	1678655	.	-	.	ID=GCA000160335_01608_gene;locus_tag=GCA000160335_01608;gene=yihA
contig_1	Pyrodigal	CDS	1678065	1678655	.	-	0	ID=GCA000160335_01608;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA000160335_01608;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0042254,GO:0043022,GO:0046872;gene=yihA;Parent=GCA000160335_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_000867694.1,SO:0001217,UniParc:UPI00003B1744,UniRef:UniRef100_Q6GG32,UniRef:UniRef50_Q2FXQ8,UniRef:UniRef90_Q2FXQ8
contig_1	Pyrodigal	gene	1678809	1680071	.	-	.	ID=GCA000160335_01609_gene;locus_tag=GCA000160335_01609;gene=clpX
contig_1	Pyrodigal	CDS	1678809	1680071	.	-	0	ID=GCA000160335_01609;Name=ATP-dependent Clp protease ATP-binding subunit ClpX;locus_tag=GCA000160335_01609;product=ATP-dependent Clp protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000160335_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_000472293.1,SO:0001217,UniParc:UPI00003B1745,UniRef:UniRef100_Q6GG31,UniRef:UniRef50_Q2FXQ7,UniRef:UniRef90_Q2FXQ7
contig_1	Pyrodigal	gene	1680222	1681523	.	-	.	ID=GCA000160335_01610_gene;locus_tag=GCA000160335_01610;gene=tig
contig_1	Pyrodigal	CDS	1680222	1681523	.	-	0	ID=GCA000160335_01610;Name=trigger factor;locus_tag=GCA000160335_01610;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000160335_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_000127572.1,SO:0001217,UniParc:UPI00003B1746,UniRef:UniRef100_Q6GG30,UniRef:UniRef50_P80698,UniRef:UniRef90_Q2FXQ6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1681686	1682615	.	-	.	ID=GCA000160335_01611_gene;locus_tag=GCA000160335_01611
contig_1	Pyrodigal	CDS	1681686	1682615	.	-	0	ID=GCA000160335_01611;Name=TPR domain protein;locus_tag=GCA000160335_01611;product=TPR domain protein;Parent=GCA000160335_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001280016.1,SO:0001217,UniParc:UPI00019F4D31,UniRef:UniRef100_A0A7Z7W2B0,UniRef:UniRef50_Q5HNM7,UniRef:UniRef90_A0A380E4T8
contig_1	Pyrodigal	gene	1682634	1683242	.	-	.	ID=GCA000160335_01612_gene;locus_tag=GCA000160335_01612;gene=ymaB
contig_1	Pyrodigal	CDS	1682634	1683242	.	-	0	ID=GCA000160335_01612;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000160335_01612;product=Nudix hydrolase domain-containing protein;gene=ymaB;Parent=GCA000160335_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4112,COG:R,RefSeq:WP_000032653.1,SO:0001217,UniParc:UPI00003B1748,UniRef:UniRef100_A0A7Z7W1W4,UniRef:UniRef50_Q2FXQ3,UniRef:UniRef90_Q2FXQ3
contig_1	Pyrodigal	gene	1683384	1683740	.	-	.	ID=GCA000160335_01613_gene;locus_tag=GCA000160335_01613;gene=rplT
contig_1	Pyrodigal	CDS	1683384	1683740	.	-	0	ID=GCA000160335_01613;Name=50S ribosomal protein L20;locus_tag=GCA000160335_01613;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA000160335_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_001138360.1,SO:0001217,UniParc:UPI0000054C25,UniRef:UniRef100_Q2FXQ1,UniRef:UniRef50_P13070,UniRef:UniRef90_Q49YB0
contig_1	Pyrodigal	gene	1683787	1683987	.	-	.	ID=GCA000160335_01614_gene;locus_tag=GCA000160335_01614;gene=rpmI
contig_1	Pyrodigal	CDS	1683787	1683987	.	-	0	ID=GCA000160335_01614;Name=50S ribosomal protein L35;locus_tag=GCA000160335_01614;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA000160335_01614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0291,COG:J,KEGG:K02916,RefSeq:WP_001125540.1,SO:0001217,UniParc:UPI0000054C26,UniRef:UniRef100_Q2FXQ0,UniRef:UniRef50_P55874,UniRef:UniRef90_Q2FXQ0
contig_1	Pyrodigal	gene	1684016	1684576	.	-	.	ID=GCA000160335_01615_gene;locus_tag=GCA000160335_01615;gene=infC
contig_1	Pyrodigal	CDS	1684016	1684576	.	-	0	ID=GCA000160335_01615;Name=translation initiation factor IF-3;locus_tag=GCA000160335_01615;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0016020,GO:0032790,GO:0043022;gene=infC;Parent=GCA000160335_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0290,COG:J,SO:0001217,UniParc:UPI00019CD766,UniRef:UniRef100_A0A0E1X4P2,UniRef:UniRef50_B9DNC6,UniRef:UniRef90_B9DNC6
contig_1	Infernal	regulatory_region	1684572	1684697	2.4e-12	-	.	ID=HBCHLJIIAO_164;Name=Ribosomal protein L20 leader;product=Ribosomal protein L20 leader;Dbxref=RFAM:RF00558;inference=profile:Rfam:RF00558;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1684772	1686265	.	-	.	ID=GCA000160335_01616_gene;locus_tag=GCA000160335_01616;gene=lysP
contig_1	Pyrodigal	CDS	1684772	1686265	.	-	0	ID=GCA000160335_01616;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000160335_01616;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000160335_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,KEGG:K11733,RefSeq:WP_000049157.1,SO:0001217,UniParc:UPI0001B70059,UniRef:UniRef100_UPI0001B70059,UniRef:UniRef50_P25737,UniRef:UniRef90_Q2FXP8
contig_1	Infernal	regulatory_region	1686411	1686586	7.4e-18	-	.	ID=HBCHLJIIAO_151;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1686692	1688629	.	-	.	ID=GCA000160335_01617_gene;locus_tag=GCA000160335_01617;gene=thrS
contig_1	Pyrodigal	CDS	1686692	1688629	.	-	0	ID=GCA000160335_01617;Name=threonine--tRNA ligase;locus_tag=GCA000160335_01617;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0006435,GO:0016740,GO:0046872;gene=thrS;Parent=GCA000160335_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_000435132.1,SO:0001217,UniParc:UPI0000030ADF,UniRef:UniRef100_Q2FG54,UniRef:UniRef50_P18255,UniRef:UniRef90_B9DNC9;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1689043	1689963	.	-	.	ID=GCA000160335_01618_gene;locus_tag=GCA000160335_01618;gene=dnaI
contig_1	Pyrodigal	CDS	1689043	1689963	.	-	0	ID=GCA000160335_01618;Name=primosomal protein DnaI;locus_tag=GCA000160335_01618;product=primosomal protein DnaI;gene=dnaI;Parent=GCA000160335_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1484,COG:L,RefSeq:WP_000808621.1,SO:0001217,UniParc:UPI00000CABBE,UniRef:UniRef100_Q2FXP5,UniRef:UniRef50_Q2FXP5,UniRef:UniRef90_Q2FXP5
contig_1	Pyrodigal	gene	1689963	1691363	.	-	.	ID=GCA000160335_01619_gene;locus_tag=GCA000160335_01619;gene=dnaB2
contig_1	Pyrodigal	CDS	1689963	1691363	.	-	0	ID=GCA000160335_01619;Name=DnaD domain-containing protein;locus_tag=GCA000160335_01619;product=DnaD domain-containing protein;gene=dnaB2;Parent=GCA000160335_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3611,COG:L,KEGG:K03346,RefSeq:WP_000533488.1,SO:0001217,UniParc:UPI00003B174B,UniRef:UniRef100_A0AAJ4YVE6,UniRef:UniRef50_Q2FXP4,UniRef:UniRef90_Q2FXP4
contig_1	Pyrodigal	gene	1691364	1691834	.	-	.	ID=GCA000160335_01620_gene;locus_tag=GCA000160335_01620;gene=nrdR
contig_1	Pyrodigal	CDS	1691364	1691834	.	-	0	ID=GCA000160335_01620;Name=transcriptional regulator NrdR;locus_tag=GCA000160335_01620;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000160335_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_000650082.1,SO:0001217,UniParc:UPI0000054C2E,UniRef:UniRef100_Q2FXP3,UniRef:UniRef50_Q5M5X8,UniRef:UniRef90_Q2FXP3
contig_1	Pyrodigal	gene	1692044	1693069	.	-	.	ID=GCA000160335_01621_gene;locus_tag=GCA000160335_01621;gene=gap
contig_1	Pyrodigal	CDS	1692044	1693069	.	-	0	ID=GCA000160335_01621;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000160335_01621;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000160335_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000106134.1,SO:0001217,UniParc:UPI00003B174C,UniRef:UniRef100_Q6GG19,UniRef:UniRef50_Q6GG19,UniRef:UniRef90_Q5HF86;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1693239	1693862	.	-	.	ID=GCA000160335_01622_gene;locus_tag=GCA000160335_01622;gene=coaE
contig_1	Pyrodigal	CDS	1693239	1693862	.	-	0	ID=GCA000160335_01622;Name=dephospho-CoA kinase;locus_tag=GCA000160335_01622;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA000160335_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_001127167.1,SO:0001217,UniParc:UPI0000127CF3,UniRef:UniRef100_Q2FG49,UniRef:UniRef50_Q49YB9,UniRef:UniRef90_Q2FG49;ec_number=2.7.1.24
contig_1	Pyrodigal	gene	1693878	1694750	.	-	.	ID=GCA000160335_01623_gene;locus_tag=GCA000160335_01623;gene=mutM
contig_1	Pyrodigal	CDS	1693878	1694750	.	-	0	ID=GCA000160335_01623;Name=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;locus_tag=GCA000160335_01623;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;Dbxref=GO:0003676,GO:0003684,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gene=mutM;Parent=GCA000160335_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K10563,RefSeq:WP_001114454.1,SO:0001217,UniParc:UPI00000CAB14,UniRef:UniRef100_A0A7Z7R077,UniRef:UniRef50_A0A7T1B1X4,UniRef:UniRef90_A0A811I2Z9;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1694766	1697396	.	-	.	ID=GCA000160335_01624_gene;locus_tag=GCA000160335_01624;gene=polA
contig_1	Pyrodigal	CDS	1694766	1697396	.	-	0	ID=GCA000160335_01624;Name=DNA polymerase I;locus_tag=GCA000160335_01624;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0008408;gene=polA;Parent=GCA000160335_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_001038301.1,SO:0001217,UniParc:UPI00019CD78D,UniRef:UniRef100_A0A7Z7R047,UniRef:UniRef50_K9B5S8,UniRef:UniRef90_A0AAJ4YWX0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1697689	1699176	.	-	.	ID=GCA000160335_01625_gene;locus_tag=GCA000160335_01625
contig_1	Pyrodigal	CDS	1697689	1699176	.	-	0	ID=GCA000160335_01625;Name=Glucosyltransferase;locus_tag=GCA000160335_01625;product=Glucosyltransferase;Parent=GCA000160335_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849445.1,SO:0001217,UniParc:UPI00003B174F,UniRef:UniRef100_A0A7Z7W1X4,UniRef:UniRef50_Q2FXN8,UniRef:UniRef90_Q2FXN8
contig_1	Pyrodigal	gene	1699677	1701341	.	-	.	ID=GCA000160335_01626_gene;locus_tag=GCA000160335_01626;gene=pnpS
contig_1	Pyrodigal	CDS	1699677	1701341	.	-	0	ID=GCA000160335_01626;Name=two-component system histidine kinase PnpS;locus_tag=GCA000160335_01626;product=two-component system histidine kinase PnpS;Dbxref=GO:0000155,GO:0016310;gene=pnpS;Parent=GCA000160335_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,SO:0001217,UniParc:UPI00003B1750,UniRef:UniRef100_A0AAJ4YVG0,UniRef:UniRef50_A0A380G833,UniRef:UniRef90_A0A7H9C746
contig_1	Pyrodigal	gene	1701341	1702042	.	-	.	ID=GCA000160335_01627_gene;locus_tag=GCA000160335_01627;gene=ompR
contig_1	Pyrodigal	CDS	1701341	1702042	.	-	0	ID=GCA000160335_01627;Name=Alkaline phosphatase synthesis transcriptional regulatory protein;locus_tag=GCA000160335_01627;product=Alkaline phosphatase synthesis transcriptional regulatory protein;gene=ompR;Parent=GCA000160335_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000080025.1,SO:0001217,UniParc:UPI00003B1751,UniRef:UniRef100_A0A0S3E1C9,UniRef:UniRef50_A0A9D3AXH1,UniRef:UniRef90_A0A0S3E1C9
contig_1	Pyrodigal	gene	1702432	1703700	.	-	.	ID=GCA000160335_01628_gene;locus_tag=GCA000160335_01628;gene=icd
contig_1	Pyrodigal	CDS	1702432	1703700	.	-	0	ID=GCA000160335_01628;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000160335_01628;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0006097,GO:0006099,GO:0051287;gene=icd;Parent=GCA000160335_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,RefSeq:WP_000123171.1,SO:0001217,UniParc:UPI00003B1752,UniRef:UniRef100_Q6GG12,UniRef:UniRef50_Q5HNL1,UniRef:UniRef90_Q8NW61;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	1703749	1704870	.	-	.	ID=GCA000160335_01629_gene;locus_tag=GCA000160335_01629;gene=gltA
contig_1	Pyrodigal	CDS	1703749	1704870	.	-	0	ID=GCA000160335_01629;Name=citrate synthase;locus_tag=GCA000160335_01629;product=citrate synthase;gene=gltA;Parent=GCA000160335_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,RefSeq:WP_000829166.1,SO:0001217,UniParc:UPI00003B1753,UniRef:UniRef100_A0A7Z7W359,UniRef:UniRef50_P39120,UniRef:UniRef90_W8U5A3
contig_1	Pyrodigal	gene	1705218	1706579	.	+	.	ID=GCA000160335_01630_gene;locus_tag=GCA000160335_01630;gene=ansP
contig_1	Pyrodigal	CDS	1705218	1706579	.	+	0	ID=GCA000160335_01630;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000160335_01630;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000160335_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000818532.1,SO:0001217,UniParc:UPI00019F4CFC,UniRef:UniRef100_A0A7Z7QZD6,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_Q2FXN2
contig_1	Pyrodigal	gene	1706927	1708684	.	-	.	ID=GCA000160335_01631_gene;locus_tag=GCA000160335_01631;gene=pyk
contig_1	Pyrodigal	CDS	1706927	1708684	.	-	0	ID=GCA000160335_01631;Name=pyruvate kinase;locus_tag=GCA000160335_01631;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000160335_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3848,COG:T,KEGG:K00873,RefSeq:WP_001232655.1,SO:0001217,UniParc:UPI00003B1755,UniRef:UniRef100_Q6GG09,UniRef:UniRef50_Q02499,UniRef:UniRef90_Q2FXM9;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1708706	1709674	.	-	.	ID=GCA000160335_01632_gene;locus_tag=GCA000160335_01632;gene=pfkA
contig_1	Pyrodigal	CDS	1708706	1709674	.	-	0	ID=GCA000160335_01632;Name=6-phosphofructokinase;locus_tag=GCA000160335_01632;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0016208,GO:0030388,GO:0042802,GO:0046872,GO:0048029,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000160335_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,KEGG:K00850,RefSeq:WP_000717560.1,SO:0001217,UniParc:UPI00003B1756,UniRef:UniRef100_Q6GG08,UniRef:UniRef50_Q2FXM8,UniRef:UniRef90_Q2FXM8;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	1709943	1710887	.	-	.	ID=GCA000160335_01633_gene;locus_tag=GCA000160335_01633;gene=accA
contig_1	Pyrodigal	CDS	1709943	1710887	.	-	0	ID=GCA000160335_01633;Name=acetyl-CoA carboxylase carboxyltransferase subunit alpha;locus_tag=GCA000160335_01633;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0009317,GO:0016743,GO:2001295;gene=accA;Parent=GCA000160335_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_000883646.1,SO:0001217,UniParc:UPI00003B1757,UniRef:UniRef100_Q6GG07,UniRef:UniRef50_Q9HXZ2,UniRef:UniRef90_Q2FXM7;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1710887	1711744	.	-	.	ID=GCA000160335_01634_gene;locus_tag=GCA000160335_01634;gene=accD
contig_1	Pyrodigal	CDS	1710887	1711744	.	-	0	ID=GCA000160335_01634;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA000160335_01634;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0008270,GO:0009317,GO:0016743,GO:2001295;gene=accD;Parent=GCA000160335_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_000471571.1,SO:0001217,UniParc:UPI0000054C3B,UniRef:UniRef100_Q2FXM6,UniRef:UniRef50_C0SP93,UniRef:UniRef90_Q2FXM6;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1711939	1713168	.	-	.	ID=GCA000160335_01635_gene;locus_tag=GCA000160335_01635;gene=sfcA
contig_1	Pyrodigal	CDS	1711939	1713168	.	-	0	ID=GCA000160335_01635;Name=NADP-dependent malic enzyme (Conversion of malate into pyruvate);locus_tag=GCA000160335_01635;product=NADP-dependent malic enzyme (Conversion of malate into pyruvate);gene=sfcA;Parent=GCA000160335_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_000058389.1,SO:0001217,UniParc:UPI00000D7686,UniRef:UniRef100_A0A7Z7QZK8,UniRef:UniRef50_A0A2U3KL65,UniRef:UniRef90_A0A7U7PYW9
contig_1	Pyrodigal	gene	1713617	1716814	.	-	.	ID=GCA000160335_01636_gene;locus_tag=GCA000160335_01636;gene=dnaE
contig_1	Pyrodigal	CDS	1713617	1716814	.	-	0	ID=GCA000160335_01636;Name=DNA polymerase III subunit alpha;locus_tag=GCA000160335_01636;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA000160335_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,RefSeq:WP_000226928.1,SO:0001217,UniParc:UPI0001B7005A,UniRef:UniRef100_UPI0001B7005A,UniRef:UniRef50_Q9F1K0,UniRef:UniRef90_Q9F1K0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1716835	1717776	.	-	.	ID=GCA000160335_01637_gene;locus_tag=GCA000160335_01637;gene=pde2
contig_1	Pyrodigal	CDS	1716835	1717776	.	-	0	ID=GCA000160335_01637;Name=pApA hydrolase Pde2;locus_tag=GCA000160335_01637;product=pApA hydrolase Pde2;gene=pde2;Parent=GCA000160335_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000626074,COG:COG0618,COG:FT,KEGG:K06881,RefSeq:WP_000626091.1,SO:0001217,UniParc:UPI00003B1759,UniRef:UniRef100_A0A0E1X6X0,UniRef:UniRef50_A0A7U7JV59,UniRef:UniRef90_A0A0U1MNX7;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	1717949	1718191	.	+	.	ID=GCA000160335_01638_gene;locus_tag=GCA000160335_01638
contig_1	Pyrodigal	CDS	1717949	1718191	.	+	0	ID=GCA000160335_01638;Name=Nitrogen regulation protein NIFR3;locus_tag=GCA000160335_01638;product=Nitrogen regulation protein NIFR3;Parent=GCA000160335_01638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CCB6D6,UniRef:UniRef100_A0A7Z7R086,UniRef:UniRef50_A0A641A7R0,UniRef:UniRef90_A0A7Z7R086
contig_1	Pyrodigal	gene	1718087	1719385	.	-	.	ID=GCA000160335_01639_gene;locus_tag=GCA000160335_01639;gene=ytoI
contig_1	Pyrodigal	CDS	1718087	1719385	.	-	0	ID=GCA000160335_01639;Name=CBS domain-containing protein;locus_tag=GCA000160335_01639;product=CBS domain-containing protein;gene=ytoI;Parent=GCA000160335_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4109,COG:K,RefSeq:WP_000160430.1,SO:0001217,UniParc:UPI00003B175A,UniRef:UniRef100_A0A7Z7R057,UniRef:UniRef50_A0A7U7JV62,UniRef:UniRef90_A0A7U7JV62
contig_1	Pyrodigal	gene	1719590	1720003	.	+	.	ID=GCA000160335_01640_gene;locus_tag=GCA000160335_01640;gene=uspA
contig_1	Pyrodigal	CDS	1719590	1720003	.	+	0	ID=GCA000160335_01640;Name=UspA domain-containing protein;locus_tag=GCA000160335_01640;product=UspA domain-containing protein;gene=uspA;Parent=GCA000160335_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000277602.1,SO:0001217,UniParc:UPI00000D7756,UniRef:UniRef100_Q2FXM1,UniRef:UniRef50_Q2FXM1,UniRef:UniRef90_Q2FXM1
contig_1	Pyrodigal	gene	1720310	1720999	.	-	.	ID=GCA000160335_01641_gene;locus_tag=GCA000160335_01641;gene=ulaG
contig_1	Pyrodigal	CDS	1720310	1720999	.	-	0	ID=GCA000160335_01641;Name=metal-dependent hydrolase;locus_tag=GCA000160335_01641;product=metal-dependent hydrolase;Dbxref=GO:0016787;gene=ulaG;Parent=GCA000160335_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,RefSeq:WP_000777184.1,SO:0001217,UniParc:UPI00003B175B,UniRef:UniRef100_Q6GG00,UniRef:UniRef50_Q2FXM0,UniRef:UniRef90_Q2FXM0
contig_1	Pyrodigal	gene	1721174	1722229	.	+	.	ID=GCA000160335_01642_gene;locus_tag=GCA000160335_01642;gene=pepP
contig_1	Pyrodigal	CDS	1721174	1722229	.	+	0	ID=GCA000160335_01642;Name=putative peptidase SAUSA300_1654;locus_tag=GCA000160335_01642;product=putative peptidase SAUSA300_1654;Dbxref=GO:0016787,GO:0046872;gene=pepP;Parent=GCA000160335_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,RefSeq:WP_000161659.1,SO:0001217,UniParc:UPI00003B175C,UniRef:UniRef100_Q6GFZ9,UniRef:UniRef50_Q7A552,UniRef:UniRef90_Q7A552;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1722539	1723657	.	-	.	ID=GCA000160335_01643_gene;locus_tag=GCA000160335_01643;gene=ald
contig_1	Pyrodigal	CDS	1722539	1723657	.	-	0	ID=GCA000160335_01643;Name=alanine dehydrogenase;locus_tag=GCA000160335_01643;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000160335_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000689997.1,SO:0001217,UniParc:UPI00003B175D,UniRef:UniRef100_Q6GFZ8,UniRef:UniRef50_P17556,UniRef:UniRef90_Q2FXL7;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1723798	1724298	.	+	.	ID=GCA000160335_01644_gene;locus_tag=GCA000160335_01644;gene=uspA
contig_1	Pyrodigal	CDS	1723798	1724298	.	+	0	ID=GCA000160335_01644;Name=Putative universal stress protein MW1653;locus_tag=GCA000160335_01644;product=Putative universal stress protein MW1653;Dbxref=GO:0005737;gene=uspA;Parent=GCA000160335_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000634175.1,SO:0001217,UniParc:UPI0000054C46,UniRef:UniRef100_Q2FXL6,UniRef:UniRef50_Q2FXL6,UniRef:UniRef90_Q2FXL6
contig_1	Pyrodigal	gene	1724545	1725747	.	-	.	ID=GCA000160335_01645_gene;locus_tag=GCA000160335_01645;gene=ackA
contig_1	Pyrodigal	CDS	1724545	1725747	.	-	0	ID=GCA000160335_01645;Name=Acetate kinase;locus_tag=GCA000160335_01645;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA000160335_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_000040067.1,SO:0001217,UniParc:UPI00003B175E,UniRef:UniRef100_Q6GFZ6,UniRef:UniRef50_O52594,UniRef:UniRef90_Q2FXL5;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	1725834	1726781	.	-	.	ID=GCA000160335_01646_gene;locus_tag=GCA000160335_01646;gene=ytxK
contig_1	Pyrodigal	CDS	1725834	1726781	.	-	0	ID=GCA000160335_01646;Name=Adenine-specific methyltransferase;locus_tag=GCA000160335_01646;product=Adenine-specific methyltransferase;gene=ytxK;Parent=GCA000160335_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0827,COG:L,RefSeq:WP_000840566.1,SO:0001217,UniParc:UPI0001B7007D,UniRef:UniRef100_UPI0001B7007D,UniRef:UniRef50_B9DN82,UniRef:UniRef90_A0A077UL38
contig_1	Pyrodigal	gene	1726904	1727398	.	-	.	ID=GCA000160335_01647_gene;locus_tag=GCA000160335_01647;gene=tpx
contig_1	Pyrodigal	CDS	1726904	1727398	.	-	0	ID=GCA000160335_01647;Name=thiol peroxidase;locus_tag=GCA000160335_01647;product=thiol peroxidase;Dbxref=GO:0008379,GO:0016684;gene=tpx;Parent=GCA000160335_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_000136257.1,SO:0001217,UniParc:UPI00003B1760,UniRef:UniRef100_Q6GFZ4,UniRef:UniRef50_P80864,UniRef:UniRef90_P66954;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1727496	1728266	.	-	.	ID=GCA000160335_01648_gene;locus_tag=GCA000160335_01648;gene=tauE
contig_1	Pyrodigal	CDS	1727496	1728266	.	-	0	ID=GCA000160335_01648;Name=putative membrane transporter protein;locus_tag=GCA000160335_01648;product=putative membrane transporter protein;gene=tauE;Parent=GCA000160335_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000365311.1,SO:0001217,UniParc:UPI0001B7007E,UniRef:UniRef100_UPI0001B7007E,UniRef:UniRef50_A0A239TZL2,UniRef:UniRef90_A0A391DGZ3
contig_1	Pyrodigal	gene	1728310	1729533	.	-	.	ID=GCA000160335_01649_gene;locus_tag=GCA000160335_01649;gene=thiI
contig_1	Pyrodigal	CDS	1728310	1729533	.	-	0	ID=GCA000160335_01649;Name=putative tRNA sulfurtransferase;locus_tag=GCA000160335_01649;product=putative tRNA sulfurtransferase;Dbxref=GO:0000049,GO:0002937,GO:0004810,GO:0005524,GO:0005829,GO:0009228,GO:0009229,GO:0052837,GO:0140741;gene=thiI;Parent=GCA000160335_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0301,COG:HJ,KEGG:K03151,RefSeq:WP_000872645.1,SO:0001217,UniParc:UPI00019CD7F6,UniRef:UniRef100_A0A2X2JUE7,UniRef:UniRef50_Q2FXL1,UniRef:UniRef90_Q2FXL1;ec_number=2.8.1.4
contig_1	Pyrodigal	gene	1729533	1730699	.	-	.	ID=GCA000160335_01650_gene;locus_tag=GCA000160335_01650;gene=nifS
contig_1	Pyrodigal	CDS	1729533	1730699	.	-	0	ID=GCA000160335_01650;Name=Aminotransferase;locus_tag=GCA000160335_01650;product=Aminotransferase;gene=nifS;Parent=GCA000160335_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,SO:0001217,UniParc:UPI00019CD7F7,UniRef:UniRef100_A0A7Z7QZX3,UniRef:UniRef50_A0A0D6HH30,UniRef:UniRef90_A0A0D6HH30
contig_1	Pyrodigal	gene	1731040	1732734	.	-	.	ID=GCA000160335_01651_gene;locus_tag=GCA000160335_01651;gene=ezrA
contig_1	Pyrodigal	CDS	1731040	1732734	.	-	0	ID=GCA000160335_01651;Name=septation ring formation regulator EzrA;locus_tag=GCA000160335_01651;product=septation ring formation regulator EzrA;Dbxref=GO:0000917,GO:0000921,GO:0005886,GO:0005940;gene=ezrA;Parent=GCA000160335_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4477,COG:D,KEGG:K06286,RefSeq:WP_000244860.1,SO:0001217,UniParc:UPI00003B1764,UniRef:UniRef100_Q6GFZ0,UniRef:UniRef50_Q5HNI8,UniRef:UniRef90_P64002
contig_1	Pyrodigal	gene	1732871	1733335	.	+	.	ID=GCA000160335_01652_gene;locus_tag=GCA000160335_01652;gene=msrC
contig_1	Pyrodigal	CDS	1732871	1733335	.	+	0	ID=GCA000160335_01652;Name=GAF domain-containing protein;locus_tag=GCA000160335_01652;product=GAF domain-containing protein;gene=msrC;Parent=GCA000160335_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1956,COG:VT,RefSeq:WP_000207849.1,SO:0001217,UniParc:UPI00003B1765,UniRef:UniRef100_A0A7Z7R096,UniRef:UniRef50_A0A0A5FWD3,UniRef:UniRef90_A0A0U1MMX1
contig_1	Pyrodigal	gene	1733579	1734181	.	+	.	ID=GCA000160335_01653_gene;locus_tag=GCA000160335_01653;gene=rpsD
contig_1	Pyrodigal	CDS	1733579	1734181	.	+	0	ID=GCA000160335_01653;Name=30S ribosomal protein S4;locus_tag=GCA000160335_01653;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000160335_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_000090513.1,SO:0001217,UniParc:UPI00019F4CF8,UniRef:UniRef100_UPI00019F4CF8,UniRef:UniRef50_P21466,UniRef:UniRef90_Q2FXK6
contig_1	Pyrodigal	gene	1734397	1735140	.	-	.	ID=GCA000160335_01654_gene;locus_tag=GCA000160335_01654;gene=ugpQ
contig_1	Pyrodigal	CDS	1734397	1735140	.	-	0	ID=GCA000160335_01654;Name=GP-PDE domain-containing protein;locus_tag=GCA000160335_01654;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000160335_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000174275.1,SO:0001217,UniParc:UPI00003B1767,UniRef:UniRef100_A0A7Z7W1Y2,UniRef:UniRef50_Q2FXK4,UniRef:UniRef90_Q2FXK4;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1735220	1735666	.	+	.	ID=GCA000160335_01655_gene;locus_tag=GCA000160335_01655;gene=osmC
contig_1	Pyrodigal	CDS	1735220	1735666	.	+	0	ID=GCA000160335_01655;Name=Organic hydroperoxide resistance protein;locus_tag=GCA000160335_01655;product=Organic hydroperoxide resistance protein;gene=osmC;Parent=GCA000160335_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,RefSeq:WP_000553919.1,SO:0001217,UniParc:UPI00003B1768,UniRef:UniRef100_A0A7Z7W230,UniRef:UniRef50_B9DN81,UniRef:UniRef90_A0A0D1JRC2
contig_1	Pyrodigal	gene	1735781	1736941	.	+	.	ID=GCA000160335_01656_gene;locus_tag=GCA000160335_01656;gene=pucG
contig_1	Pyrodigal	CDS	1735781	1736941	.	+	0	ID=GCA000160335_01656;Name=Aminotransferase class V domain-containing protein;locus_tag=GCA000160335_01656;product=Aminotransferase class V domain-containing protein;gene=pucG;Parent=GCA000160335_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0075,COG:EF,RefSeq:WP_000291426.1,SO:0001217,UniParc:UPI00003B1769,UniRef:UniRef100_A0A7Z7W2C5,UniRef:UniRef50_Q2FXK2,UniRef:UniRef90_Q2FXK2
contig_1	Pyrodigal	gene	1736928	1738532	.	+	.	ID=GCA000160335_01657_gene;locus_tag=GCA000160335_01657;gene=serA
contig_1	Pyrodigal	CDS	1736928	1738532	.	+	0	ID=GCA000160335_01657;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000160335_01657;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0006564;gene=serA;Parent=GCA000160335_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,RefSeq:WP_000808837.1,SO:0001217,UniParc:UPI00003B176A,UniRef:UniRef100_A0A7Z7W1Y4,UniRef:UniRef50_B9DN70,UniRef:UniRef90_A0A3A5LA45;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	1738682	1739812	.	-	.	ID=GCA000160335_01658_gene;locus_tag=GCA000160335_01658;gene=gph
contig_1	Pyrodigal	CDS	1738682	1739812	.	-	0	ID=GCA000160335_01658;Name=HAD family hydrolase;locus_tag=GCA000160335_01658;product=HAD family hydrolase;gene=gph;Parent=GCA000160335_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000721720.1,SO:0001217,UniParc:UPI00003B176B,UniRef:UniRef100_A0A7Z7W370,UniRef:UniRef50_A0A6N3EB75,UniRef:UniRef90_A0A389U3P7
contig_1	Pyrodigal	gene	1739918	1741384	.	-	.	ID=GCA000160335_01659_gene;locus_tag=GCA000160335_01659;gene=ptsG2
contig_1	Pyrodigal	CDS	1739918	1741384	.	-	0	ID=GCA000160335_01659;Name=N-acetylglucosamine-specific PTS transporter subunit IIBC;locus_tag=GCA000160335_01659;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000160335_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000276354.1,SO:0001217,UniParc:UPI000175C1E8,UniRef:UniRef100_A0A6B5LKU9,UniRef:UniRef50_A0A2Y2SMF5,UniRef:UniRef90_A0A2Y2SMF5
contig_1	Pyrodigal	gene	1741512	1742129	.	-	.	ID=GCA000160335_01660_gene;locus_tag=GCA000160335_01660;gene=plsC
contig_1	Pyrodigal	CDS	1741512	1742129	.	-	0	ID=GCA000160335_01660;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA000160335_01660;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;gene=plsC;Parent=GCA000160335_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_000287585.1,SO:0001217,UniParc:UPI00003B176D,UniRef:UniRef100_A0A7Z7QZY2,UniRef:UniRef50_A0A1D4JQG0,UniRef:UniRef90_A0A2K4AFG9
contig_1	Pyrodigal	gene	1742301	1743575	.	+	.	ID=GCA000160335_01661_gene;locus_tag=GCA000160335_01661;gene=degQ
contig_1	Pyrodigal	CDS	1742301	1743575	.	+	0	ID=GCA000160335_01661;Name=Serine protease HtrA-like;locus_tag=GCA000160335_01661;product=Serine protease HtrA-like;gene=degQ;Parent=GCA000160335_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_001279341.1,SO:0001217,UniParc:UPI00003B176E,UniRef:UniRef100_A0A7Z7QZA5,UniRef:UniRef50_A0A380HKD8,UniRef:UniRef90_A0A2K4AFG2
contig_1	Pyrodigal	gene	1743669	1744931	.	-	.	ID=GCA000160335_01662_gene;locus_tag=GCA000160335_01662;gene=tyrS
contig_1	Pyrodigal	CDS	1743669	1744931	.	-	0	ID=GCA000160335_01662;Name=tyrosine--tRNA ligase;locus_tag=GCA000160335_01662;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437;gene=tyrS;Parent=GCA000160335_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_000186029.1,SO:0001217,UniParc:UPI000002E8ED,UniRef:UniRef100_Q2FXJ5,UniRef:UniRef50_Q2FXJ5,UniRef:UniRef90_Q2FXJ5;ec_number=6.1.1.1
contig_1	Pyrodigal	gene	1745312	1746217	.	+	.	ID=GCA000160335_01663_gene;locus_tag=GCA000160335_01663;gene=mrcB
contig_1	Pyrodigal	CDS	1745312	1746217	.	+	0	ID=GCA000160335_01663;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000160335_01663;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000160335_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K12551,RefSeq:WP_000184377.1,SO:0001217,UniParc:UPI00003B176F,UniRef:UniRef100_A0AAJ4YVL4,UniRef:UniRef50_G5JFR8,UniRef:UniRef90_A0A6B0D5L6;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1746423	1749095	.	-	.	ID=GCA000160335_01664_gene;locus_tag=GCA000160335_01664;gene=harA
contig_1	Pyrodigal	CDS	1746423	1749095	.	-	0	ID=GCA000160335_01664;Name=haptoglobin-binding heme uptake protein HarA;locus_tag=GCA000160335_01664;product=haptoglobin-binding heme uptake protein HarA;Dbxref=GO:0005576,GO:0020037;gene=harA;Parent=GCA000160335_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,KEGG:K25121,RefSeq:WP_001032796.1,SO:0001217,UniParc:UPI0001B701D6,UniRef:UniRef100_UPI0001B701D6,UniRef:UniRef50_Q2FXJ2,UniRef:UniRef90_Q2FXJ2,VFDB:VFC0272,VFDB:VFG044443
contig_1	Infernal	gene	1749149	1749209	.	+	.	ID=GCA000160335_01665_gene;locus_tag=GCA000160335_01665;gene=rsaB
contig_1	Infernal	ncRNA	1749149	1749209	1.7e-13	+	.	ID=GCA000160335_01665;Name=RNA Staph. aureus A;locus_tag=GCA000160335_01665;gene=rsaB;product=RNA Staph. aureus A;Dbxref=RFAM:RF01817;Parent=GCA000160335_01665_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01817
contig_1	Pyrodigal	gene	1749429	1751096	.	-	.	ID=GCA000160335_01666_gene;locus_tag=GCA000160335_01666;gene=fhs
contig_1	Pyrodigal	CDS	1749429	1751096	.	-	0	ID=GCA000160335_01666;Name=formate--tetrahydrofolate ligase;locus_tag=GCA000160335_01666;product=formate--tetrahydrofolate ligase;Dbxref=GO:0004329,GO:0005524,GO:0035999;gene=fhs;Parent=GCA000160335_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2759,COG:F,RefSeq:WP_000149412.1,SO:0001217,UniParc:UPI00000D9E8E,UniRef:UniRef100_Q6GFX6,UniRef:UniRef50_Q5HF42,UniRef:UniRef90_Q5HF42;ec_number=6.3.4.3
contig_1	Pyrodigal	gene	1751536	1753242	.	-	.	ID=GCA000160335_01667_gene;locus_tag=GCA000160335_01667;gene=acsA
contig_1	Pyrodigal	CDS	1751536	1753242	.	-	0	ID=GCA000160335_01667;Name=acetate--CoA ligase;locus_tag=GCA000160335_01667;product=acetate--CoA ligase;gene=acsA;Parent=GCA000160335_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000862084.1,SO:0001217,UniParc:UPI00003B1771,UniRef:UniRef100_A0A7Z7QZH7,UniRef:UniRef50_P39062,UniRef:UniRef90_A0A7Z7QZH7;ec_number=6.2.1.1
contig_1	Pyrodigal	gene	1753411	1754043	.	+	.	ID=GCA000160335_01668_gene;locus_tag=GCA000160335_01668
contig_1	Pyrodigal	CDS	1753411	1754043	.	+	0	ID=GCA000160335_01668;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_01668;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04766,RefSeq:WP_001015997.1,SO:0001217,UniParc:UPI00003B1772,UniRef:UniRef100_A0A7Z7R0B7,UniRef:UniRef50_P39065,UniRef:UniRef90_Q2G293;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1754068	1755237	.	+	.	ID=GCA000160335_01669_gene;locus_tag=GCA000160335_01669;gene=acuC
contig_1	Pyrodigal	CDS	1754068	1755237	.	+	0	ID=GCA000160335_01669;Name=Acetoin utilization protein AcuC;locus_tag=GCA000160335_01669;product=Acetoin utilization protein AcuC;Dbxref=GO:0004407,GO:0040029,GO:0045150;gene=acuC;Parent=GCA000160335_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0123,COG:Q,RefSeq:WP_001183986.1,SO:0001217,UniParc:UPI00003B1773,UniRef:UniRef100_Q6GFX3,UniRef:UniRef50_P64375,UniRef:UniRef90_P64375
contig_1	Pyrodigal	gene	1755335	1756324	.	-	.	ID=GCA000160335_01670_gene;locus_tag=GCA000160335_01670;gene=ccpA
contig_1	Pyrodigal	CDS	1755335	1756324	.	-	0	ID=GCA000160335_01670;Name=catabolite control protein A;locus_tag=GCA000160335_01670;product=catabolite control protein A;Dbxref=GO:0000976,GO:0001228,GO:0003677,GO:0003700,GO:0005975,GO:0006355;gene=ccpA;Parent=GCA000160335_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000219068.1,SO:0001217,UniParc:UPI00019CD4C4,UniRef:UniRef100_A0A7Z7W1Y9,UniRef:UniRef50_Q5HNH3,UniRef:UniRef90_Q5HF38
contig_1	Pyrodigal	gene	1756864	1757955	.	-	.	ID=GCA000160335_01671_gene;locus_tag=GCA000160335_01671;gene=aroGA
contig_1	Pyrodigal	CDS	1756864	1757955	.	-	0	ID=GCA000160335_01671;Name=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;locus_tag=GCA000160335_01671;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;Dbxref=GO:0003824,GO:0009073,GO:0046417;gene=aroGA;Parent=GCA000160335_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2876,COG:E,KEGG:K13853,RefSeq:WP_000066379.1,SO:0001217,UniParc:UPI00003B1775,UniRef:UniRef100_A0A7Z7W236,UniRef:UniRef50_P39912,UniRef:UniRef90_A0A7U7JV80;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1758649	1759839	.	-	.	ID=GCA000160335_01672_gene;locus_tag=GCA000160335_01672
contig_1	Pyrodigal	CDS	1758649	1759839	.	-	0	ID=GCA000160335_01672;Name=Maebl;locus_tag=GCA000160335_01672;product=Maebl;Parent=GCA000160335_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193955.1,SO:0001217,UniParc:UPI00019F4CE1,UniRef:UniRef100_A0A7Z7W2D0,UniRef:UniRef50_A0A0H2XJG9,UniRef:UniRef90_A0A0E1XEZ1
contig_1	Pyrodigal	gene	1759913	1760404	.	-	.	ID=GCA000160335_01673_gene;locus_tag=GCA000160335_01673
contig_1	Pyrodigal	CDS	1759913	1760404	.	-	0	ID=GCA000160335_01673;Name=UPF0478 protein MW1682;locus_tag=GCA000160335_01673;product=UPF0478 protein MW1682;Dbxref=GO:0005886;Parent=GCA000160335_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4768,COG:S,RefSeq:WP_000383814.1,SO:0001217,UniParc:UPI0000054388,UniRef:UniRef100_Q2G247,UniRef:UniRef50_Q49YH0,UniRef:UniRef90_Q2G247
contig_1	Pyrodigal	gene	1760478	1761791	.	-	.	ID=GCA000160335_01674_gene;locus_tag=GCA000160335_01674;gene=murC
contig_1	Pyrodigal	CDS	1760478	1761791	.	-	0	ID=GCA000160335_01674;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000160335_01674;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000160335_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_000150173.1,SO:0001217,UniParc:UPI00003B1777,UniRef:UniRef100_Q6GFW8,UniRef:UniRef50_Q2FXJ0,UniRef:UniRef90_Q2FXJ0;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	1761815	1761988	.	-	.	ID=GCA000160335_01675_gene;locus_tag=GCA000160335_01675;gene=ftsK
contig_1	Pyrodigal	CDS	1761815	1761988	.	-	0	ID=GCA000160335_01675;Name=FtsK domain-containing protein;locus_tag=GCA000160335_01675;product=FtsK domain-containing protein;gene=ftsK;Parent=GCA000160335_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,SO:0001217,UniParc:UPI0001B5A619,UniRef:UniRef100_A0A7Z7QZH4,UniRef:UniRef50_A0A151A4B2,UniRef:UniRef90_Q2FXI9
contig_1	Pyrodigal	gene	1761955	1765638	.	-	.	ID=GCA000160335_01676_gene;locus_tag=GCA000160335_01676;gene=ftsK
contig_1	Pyrodigal	CDS	1761955	1765638	.	-	0	ID=GCA000160335_01676;Name=FtsK domain-containing protein;locus_tag=GCA000160335_01676;product=FtsK domain-containing protein;gene=ftsK;Parent=GCA000160335_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,SO:0001217,UniRef:UniRef50_A0A151A4B2,UniRef:UniRef90_Q2FXI9
contig_1	Pyrodigal	gene	1765659	1766255	.	-	.	ID=GCA000160335_01677_gene;locus_tag=GCA000160335_01677;gene=ytpR
contig_1	Pyrodigal	CDS	1765659	1766255	.	-	0	ID=GCA000160335_01677;Name=YtpR family tRNA-binding protein;locus_tag=GCA000160335_01677;product=YtpR family tRNA-binding protein;gene=ytpR;Parent=GCA000160335_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,RefSeq:WP_001048371.1,SO:0001217,UniParc:UPI0001B700A3,UniRef:UniRef100_A0A2S6DGF7,UniRef:UniRef50_O34943,UniRef:UniRef90_A0A2S6DGF7
contig_1	Pyrodigal	gene	1766284	1767141	.	-	.	ID=GCA000160335_01678_gene;locus_tag=GCA000160335_01678;gene=ytpQ
contig_1	Pyrodigal	CDS	1766284	1767141	.	-	0	ID=GCA000160335_01678;Name=UPF0354 protein SA1564;locus_tag=GCA000160335_01678;product=UPF0354 protein SA1564;gene=ytpQ;Parent=GCA000160335_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4848,COG:R,RefSeq:WP_001091387.1,SO:0001217,UniParc:UPI00000CAE0C,UniRef:UniRef100_Q2FXI7,UniRef:UniRef50_Q2FXI7,UniRef:UniRef90_Q2FXI7
contig_1	Pyrodigal	gene	1767241	1767552	.	-	.	ID=GCA000160335_01679_gene;locus_tag=GCA000160335_01679;gene=cnoX
contig_1	Pyrodigal	CDS	1767241	1767552	.	-	0	ID=GCA000160335_01679;Name=Thioredoxin domain-containing protein;locus_tag=GCA000160335_01679;product=Thioredoxin domain-containing protein;gene=cnoX;Parent=GCA000160335_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_000811163.1,SO:0001217,UniParc:UPI0000054384,UniRef:UniRef100_Q2FXI6,UniRef:UniRef50_A0A380G846,UniRef:UniRef90_Q2FXI6
contig_1	Pyrodigal	gene	1767617	1768693	.	-	.	ID=GCA000160335_01680_gene;locus_tag=GCA000160335_01680;gene=frvX
contig_1	Pyrodigal	CDS	1767617	1768693	.	-	0	ID=GCA000160335_01680;Name=Glutamyl aminopeptidase Deblocking aminopeptidase;locus_tag=GCA000160335_01680;product=Glutamyl aminopeptidase Deblocking aminopeptidase;gene=frvX;Parent=GCA000160335_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001024574.1,SO:0001217,UniParc:UPI00003B177A,UniRef:UniRef100_A0A0D1GA35,UniRef:UniRef50_A0A0D1GA35,UniRef:UniRef90_A0A0D1GA35
contig_1	Pyrodigal	gene	1768777	1769091	.	+	.	ID=GCA000160335_01681_gene;locus_tag=GCA000160335_01681
contig_1	Pyrodigal	CDS	1768777	1769091	.	+	0	ID=GCA000160335_01681;Name=PepSY domain-containing protein;locus_tag=GCA000160335_01681;product=PepSY domain-containing protein;Parent=GCA000160335_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5584,COG:S,SO:0001217,UniParc:UPI00006E3DDC,UniRef:UniRef100_Q2FXI4,UniRef:UniRef50_Q2FXI4,UniRef:UniRef90_Q2FXI4
contig_1	Pyrodigal	gene	1769215	1770057	.	-	.	ID=GCA000160335_01682_gene;locus_tag=GCA000160335_01682;gene=gloB
contig_1	Pyrodigal	CDS	1769215	1770057	.	-	0	ID=GCA000160335_01682;Name=Metal-dependent hydrolase;locus_tag=GCA000160335_01682;product=Metal-dependent hydrolase;gene=gloB;Parent=GCA000160335_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_000689585.1,SO:0001217,UniParc:UPI00003B177B,UniRef:UniRef100_A0A0E1X4H4,UniRef:UniRef50_A0A077US04,UniRef:UniRef90_A0A077US04
contig_1	Infernal	gene	1770324	1770381	.	+	.	ID=GCA000160335_01683_gene;locus_tag=GCA000160335_01683;gene=sau-5949
contig_1	Infernal	ncRNA	1770324	1770381	3.2e-12	+	.	ID=GCA000160335_01683;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000160335_01683;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000160335_01683_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1770584	1771228	.	-	.	ID=GCA000160335_01684_gene;locus_tag=GCA000160335_01684;gene=trmB
contig_1	Pyrodigal	CDS	1770584	1771228	.	-	0	ID=GCA000160335_01684;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000160335_01684;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176,GO:0043527;gene=trmB;Parent=GCA000160335_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0220,COG:J,RefSeq:WP_001266152.1,SO:0001217,UniParc:UPI00003B177E,UniRef:UniRef100_Q6GFV3,UniRef:UniRef50_Q2FXI2,UniRef:UniRef90_Q2FXI2;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	1771243	1772034	.	-	.	ID=GCA000160335_01685_gene;locus_tag=GCA000160335_01685;gene=cotS
contig_1	Pyrodigal	CDS	1771243	1772034	.	-	0	ID=GCA000160335_01685;Name=Aminoglycoside phosphotransferase domain-containing protein;locus_tag=GCA000160335_01685;product=Aminoglycoside phosphotransferase domain-containing protein;gene=cotS;Parent=GCA000160335_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0510,COG:H,RefSeq:WP_000434765.1,SO:0001217,UniParc:UPI00000CAA0E,UniRef:UniRef100_A0A7Z7R097,UniRef:UniRef50_I3ECD2,UniRef:UniRef90_Q2FXI1
contig_1	Pyrodigal	gene	1772585	1773433	.	-	.	ID=GCA000160335_01686_gene;locus_tag=GCA000160335_01686;gene=dat
contig_1	Pyrodigal	CDS	1772585	1773433	.	-	0	ID=GCA000160335_01686;Name=D-amino-acid transaminase;locus_tag=GCA000160335_01686;product=D-amino-acid transaminase;Dbxref=GO:0005829,GO:0019478,GO:0019480,GO:0030170,GO:0046416,GO:0046437,GO:0047810;gene=dat;Parent=GCA000160335_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00824,RefSeq:WP_000411087.1,SO:0001217,UniParc:UPI00000D9E9A,UniRef:UniRef100_Q6GFV1,UniRef:UniRef50_Q5HNG0,UniRef:UniRef90_P63511;ec_number=2.6.1.21
contig_1	Pyrodigal	gene	1773437	1774846	.	-	.	ID=GCA000160335_01687_gene;locus_tag=GCA000160335_01687;gene=sapep
contig_1	Pyrodigal	CDS	1773437	1774846	.	-	0	ID=GCA000160335_01687;Name=Mn(2+)-dependent dipeptidase Sapep;locus_tag=GCA000160335_01687;product=Mn(2+)-dependent dipeptidase Sapep;Dbxref=GO:0006508,GO:0006526,GO:0008237,GO:0008270,GO:0008777,GO:0016805;gene=sapep;Parent=GCA000160335_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000265417,COG:COG0624,COG:E,RefSeq:WP_000265408.1,SO:0001217,UniParc:UPI00003B177F,UniRef:UniRef100_Q6GFV0,UniRef:UniRef50_Q2FXH9,UniRef:UniRef90_Q2FXH9;ec_number=3.4.13.-
contig_1	Pyrodigal	gene	1775052	1775474	.	-	.	ID=GCA000160335_01688_gene;locus_tag=GCA000160335_01688;gene=ytxH
contig_1	Pyrodigal	CDS	1775052	1775474	.	-	0	ID=GCA000160335_01688;Name=YtxH domain-containing protein;locus_tag=GCA000160335_01688;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000160335_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001051856.1,SO:0001217,UniParc:UPI00000D7698,UniRef:UniRef100_A0A4T9WQT6,UniRef:UniRef50_A0A1J3ZYN5,UniRef:UniRef90_Q2FXH8
contig_1	Pyrodigal	gene	1775491	1776186	.	-	.	ID=GCA000160335_01689_gene;locus_tag=GCA000160335_01689
contig_1	Pyrodigal	CDS	1775491	1776186	.	-	0	ID=GCA000160335_01689;Name=Pseudouridine synthase;locus_tag=GCA000160335_01689;product=Pseudouridine synthase;Parent=GCA000160335_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217118.1,SO:0001217,UniParc:UPI00003B1780,UniRef:UniRef100_A0A2X2KJX4,UniRef:UniRef50_A0A2X2KJX4,UniRef:UniRef90_A0A2X2KJX4
contig_1	Pyrodigal	gene	1776183	1777844	.	-	.	ID=GCA000160335_01690_gene;locus_tag=GCA000160335_01690;gene=spoVB
contig_1	Pyrodigal	CDS	1776183	1777844	.	-	0	ID=GCA000160335_01690;Name=Polysaccharide biosynthesis protein;locus_tag=GCA000160335_01690;product=Polysaccharide biosynthesis protein;gene=spoVB;Parent=GCA000160335_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5841,COG:D,RefSeq:WP_000004340.1,SO:0001217,UniParc:UPI00003B1781,UniRef:UniRef100_A0A7Z7W381,UniRef:UniRef50_B9E7H2,UniRef:UniRef90_A0A2K4AFH1
contig_1	Pyrodigal	gene	1778248	1778364	.	+	.	ID=GCA000160335_01691_gene;locus_tag=GCA000160335_01691
contig_1	Pyrodigal	CDS	1778248	1778364	.	+	0	ID=GCA000160335_01691;Name=hypothetical protein;locus_tag=GCA000160335_01691;product=hypothetical protein;Parent=GCA000160335_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF13450.12
contig_1	Pyrodigal	gene	1778318	1779517	.	+	.	ID=GCA000160335_01692_gene;locus_tag=GCA000160335_01692;gene=yhiN
contig_1	Pyrodigal	CDS	1778318	1779517	.	+	0	ID=GCA000160335_01692;Name=Aminoacetone oxidase family FAD-binding enzyme;locus_tag=GCA000160335_01692;product=Aminoacetone oxidase family FAD-binding enzyme;gene=yhiN;Parent=GCA000160335_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,SO:0001217,UniRef:UniRef50_A0A0U1MPZ9,UniRef:UniRef90_A0A0U1MPZ9
contig_1	Pyrodigal	gene	1779634	1785741	.	-	.	ID=GCA000160335_01693_gene;locus_tag=GCA000160335_01693;gene=sasC
contig_1	Pyrodigal	CDS	1779634	1785741	.	-	0	ID=GCA000160335_01693;Name=LPXTG-anchored repetitive surface protein SasC;locus_tag=GCA000160335_01693;product=LPXTG-anchored repetitive surface protein SasC;gene=sasC;Parent=GCA000160335_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001050546,RefSeq:WP_001050518.1,SO:0001217,UniParc:UPI0001B700A4,UniRef:UniRef100_UPI0001B700A4,UniRef:UniRef50_C7BUR8,UniRef:UniRef90_A0AAE2ZW02
contig_1	Pyrodigal	gene	1786065	1786376	.	-	.	ID=GCA000160335_01694_gene;locus_tag=GCA000160335_01694;gene=pspE
contig_1	Pyrodigal	CDS	1786065	1786376	.	-	0	ID=GCA000160335_01694;Name=Rhodanese domain-containing protein;locus_tag=GCA000160335_01694;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000160335_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_000836472.1,SO:0001217,UniParc:UPI00003B1784,UniRef:UniRef100_A0A7Z7QZC3,UniRef:UniRef50_A0A654B5B2,UniRef:UniRef90_Q2FXH3
contig_1	Pyrodigal	gene	1786398	1788815	.	-	.	ID=GCA000160335_01695_gene;locus_tag=GCA000160335_01695;gene=leuS
contig_1	Pyrodigal	CDS	1786398	1788815	.	-	0	ID=GCA000160335_01695;Name=leucine--tRNA ligase;locus_tag=GCA000160335_01695;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000160335_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_001794349.1,SO:0001217,UniParc:UPI0001B700A5,UniRef:UniRef100_UPI0001B700A5,UniRef:UniRef50_A8FGG0,UniRef:UniRef90_Q2FXH2;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	1789104	1790285	.	-	.	ID=GCA000160335_01696_gene;locus_tag=GCA000160335_01696;gene=araJ
contig_1	Pyrodigal	CDS	1789104	1790285	.	-	0	ID=GCA000160335_01696;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_01696;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000160335_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001025064.1,SO:0001217,UniParc:UPI00003B1786,UniRef:UniRef100_A0A7Z7QZR2,UniRef:UniRef50_Q2FXH1,UniRef:UniRef90_Q2FXH1
contig_1	Pyrodigal	gene	1790395	1791348	.	+	.	ID=GCA000160335_01697_gene;locus_tag=GCA000160335_01697;gene=yhcC
contig_1	Pyrodigal	CDS	1790395	1791348	.	+	0	ID=GCA000160335_01697;Name=TIGR01212 family radical SAM protein;locus_tag=GCA000160335_01697;product=TIGR01212 family radical SAM protein;Dbxref=GO:0051536,GO:1904047;gene=yhcC;Parent=GCA000160335_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1242,COG:R,KEGG:K07139,RefSeq:WP_000526541.1,SO:0001217,UniParc:UPI00003B1787,UniRef:UniRef100_A0A7Z7QZZ9,UniRef:UniRef50_U1LL80,UniRef:UniRef90_Q2FXH0
contig_1	Pyrodigal	gene	1791345	1791908	.	+	.	ID=GCA000160335_01698_gene;locus_tag=GCA000160335_01698;gene=mnmM
contig_1	Pyrodigal	CDS	1791345	1791908	.	+	0	ID=GCA000160335_01698;Name=tRNA (mnm(5)s(2)U34)-methyltransferase;locus_tag=GCA000160335_01698;product=tRNA (mnm(5)s(2)U34)-methyltransferase;Dbxref=GO:0008033,GO:0008168,GO:0032259;gene=mnmM;Parent=GCA000160335_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,RefSeq:WP_000764425.1,SO:0001217,UniParc:UPI00003B1788,UniRef:UniRef100_A0A7Z7QZJ4,UniRef:UniRef50_Q2FXG9,UniRef:UniRef90_Q2FXG9;ec_number=2.1.1.61
contig_1	Pyrodigal	gene	1792027	1792428	.	-	.	ID=GCA000160335_01699_gene;locus_tag=GCA000160335_01699;gene=rot
contig_1	Pyrodigal	CDS	1792027	1792428	.	-	0	ID=GCA000160335_01699;Name=HTH-type transcriptional regulator rot;locus_tag=GCA000160335_01699;product=HTH-type transcriptional regulator rot;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=rot;Parent=GCA000160335_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K20338,RefSeq:WP_000757543.1,SO:0001217,UniParc:UPI000069AAE8,UniRef:UniRef100_Q9RFJ6,UniRef:UniRef50_Q9RFJ6,UniRef:UniRef90_Q9RFJ6
contig_1	Pyrodigal	gene	1793002	1793829	.	-	.	ID=GCA000160335_01700_gene;locus_tag=GCA000160335_01700;gene=pldB
contig_1	Pyrodigal	CDS	1793002	1793829	.	-	0	ID=GCA000160335_01700;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000160335_01700;product=Serine aminopeptidase S33 domain-containing protein;gene=pldB;Parent=GCA000160335_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_000266096.1,SO:0001217,UniParc:UPI000005436B,UniRef:UniRef100_Q2FXG5,UniRef:UniRef50_Q2FXG5,UniRef:UniRef90_Q2FXG5
contig_1	Pyrodigal	gene	1794063	1795064	.	+	.	ID=GCA000160335_01701_gene;locus_tag=GCA000160335_01701;gene=putA
contig_1	Pyrodigal	CDS	1794063	1795064	.	+	0	ID=GCA000160335_01701;Name=proline dehydrogenase;locus_tag=GCA000160335_01701;product=proline dehydrogenase;gene=putA;Parent=GCA000160335_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0506,COG:E,RefSeq:WP_001196350.1,SO:0001217,UniParc:UPI0001B700A6,UniRef:UniRef100_UPI0001B700A6,UniRef:UniRef50_A0A390ZXL9,UniRef:UniRef90_A0A390ZXL9
contig_1	Pyrodigal	gene	1795186	1795650	.	-	.	ID=GCA000160335_01702_gene;locus_tag=GCA000160335_01702;gene=ribE
contig_1	Pyrodigal	CDS	1795186	1795650	.	-	0	ID=GCA000160335_01702;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000160335_01702;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005829,GO:0009231,GO:0009349;gene=ribE;Parent=GCA000160335_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_001008553.1,SO:0001217,UniParc:UPI0001B700A7,UniRef:UniRef100_A0A7Z7W248,UniRef:UniRef50_O66529,UniRef:UniRef90_Q2FXG2;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	1795663	1796844	.	-	.	ID=GCA000160335_01703_gene;locus_tag=GCA000160335_01703;gene=ribBA
contig_1	Pyrodigal	CDS	1795663	1796844	.	-	0	ID=GCA000160335_01703;Name=Riboflavin biosynthesis protein RibBA;locus_tag=GCA000160335_01703;product=Riboflavin biosynthesis protein RibBA;Dbxref=GO:0000287,GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0008686,GO:0009231,GO:0030145;gene=ribBA;Parent=GCA000160335_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,KEGG:K14652,RefSeq:WP_001159032.1,SO:0001217,UniParc:UPI00003B178D,UniRef:UniRef100_Q6GFT5,UniRef:UniRef50_Q4L7B1,UniRef:UniRef90_Q99TA0;ec_number=4.1.99.12
contig_1	Pyrodigal	gene	1796855	1797487	.	-	.	ID=GCA000160335_01704_gene;locus_tag=GCA000160335_01704;gene=ribC
contig_1	Pyrodigal	CDS	1796855	1797487	.	-	0	ID=GCA000160335_01704;Name=riboflavin synthase;locus_tag=GCA000160335_01704;product=riboflavin synthase;gene=ribC;Parent=GCA000160335_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_000493891.1,SO:0001217,UniParc:UPI00003B178E,UniRef:UniRef100_A0A7Z7W1Z9,UniRef:UniRef50_B9DN31,UniRef:UniRef90_A0A0U1MNE7;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1797494	1798537	.	-	.	ID=GCA000160335_01705_gene;locus_tag=GCA000160335_01705;gene=ribD
contig_1	Pyrodigal	CDS	1797494	1798537	.	-	0	ID=GCA000160335_01705;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000160335_01705;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008703,GO:0008835;gene=ribD;Parent=GCA000160335_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,RefSeq:WP_000077342.1,SO:0001217,UniParc:UPI00003B178F,UniRef:UniRef100_A0A7Z7W385,UniRef:UniRef50_A0A2G4VG13,UniRef:UniRef90_A0A2G4VG13;ec_number=3.5.4.26
contig_1	Infernal	regulatory_region	1798664	1798799	3.2e-20	-	.	ID=HBCHLJIIAO_149;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1799018	1800520	.	-	.	ID=GCA000160335_01706_gene;locus_tag=GCA000160335_01706;gene=ydhS
contig_1	Pyrodigal	CDS	1799018	1800520	.	-	0	ID=GCA000160335_01706;Name=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000160335_01706;product=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;gene=ydhS;Parent=GCA000160335_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4529,COG:R,RefSeq:WP_001261683.1,SO:0001217,UniParc:UPI00003B1790,UniRef:UniRef100_A0AAJ4YVK9,UniRef:UniRef50_S2XMM3,UniRef:UniRef90_Q2FXF8
contig_1	Pyrodigal	gene	1801162	1801476	.	+	.	ID=GCA000160335_01707_gene;locus_tag=GCA000160335_01707;gene=arsR
contig_1	Pyrodigal	CDS	1801162	1801476	.	+	0	ID=GCA000160335_01707;Name=ArsR;locus_tag=GCA000160335_01707;product=ArsR;gene=arsR;Parent=GCA000160335_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0640,COG:K,RefSeq:WP_000221190.1,SO:0001217,UniParc:UPI00005FE5BE,UniRef:UniRef100_A0A7Z7QZD1,UniRef:UniRef50_P30338,UniRef:UniRef90_Q6Y0Q0
contig_1	Pyrodigal	gene	1801476	1802768	.	+	.	ID=GCA000160335_01708_gene;locus_tag=GCA000160335_01708;gene=arsB
contig_1	Pyrodigal	CDS	1801476	1802768	.	+	0	ID=GCA000160335_01708;Name=arsenite efflux transporter membrane subunit ArsB;locus_tag=GCA000160335_01708;product=arsenite efflux transporter membrane subunit ArsB;Dbxref=GO:0005886,GO:0015105,GO:0015700,GO:0016020,GO:0046685;gene=arsB;Parent=GCA000160335_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1055,COG:P,KEGG:K03893,NCBIFam:NF033877.0,RefSeq:WP_000989104.1,SO:0001217,UniParc:UPI00003B1792,UniRef:UniRef100_Q6GFT0,UniRef:UniRef50_Q5HF02,UniRef:UniRef90_Q5HF02
contig_1	Pyrodigal	gene	1802855	1803709	.	-	.	ID=GCA000160335_01709_gene;locus_tag=GCA000160335_01709;gene=lytD
contig_1	Pyrodigal	CDS	1802855	1803709	.	-	0	ID=GCA000160335_01709;Name=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;locus_tag=GCA000160335_01709;product=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;gene=lytD;Parent=GCA000160335_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_001032833.1,SO:0001217,UniParc:UPI00000BF2A9,UniRef:UniRef100_Q2FXF4,UniRef:UniRef50_Q2FXF4,UniRef:UniRef90_Q2FXF4
contig_1	Pyrodigal	gene	1803985	1804209	.	-	.	ID=GCA000160335_01710_gene;locus_tag=GCA000160335_01710
contig_1	Pyrodigal	CDS	1803985	1804209	.	-	0	ID=GCA000160335_01710;Name=Staphylococcal protein;locus_tag=GCA000160335_01710;product=Staphylococcal protein;Parent=GCA000160335_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384171.1,SO:0001217,UniParc:UPI000005435F,UniRef:UniRef100_Q2FXF3,UniRef:UniRef50_Q2FXF3,UniRef:UniRef90_Q2FXF3
contig_1	Pyrodigal	gene	1804408	1804878	.	+	.	ID=GCA000160335_01711_gene;locus_tag=GCA000160335_01711;gene=sigS
contig_1	Pyrodigal	CDS	1804408	1804878	.	+	0	ID=GCA000160335_01711;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000160335_01711;product=RNA polymerase sigma factor SigS;Dbxref=GO:0003677,GO:0006352,GO:0016987;gene=sigS;Parent=GCA000160335_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000671059.1,SO:0001217,UniParc:UPI00003B1793,UniRef:UniRef100_Q6GFS7,UniRef:UniRef50_Q2FXF2,UniRef:UniRef90_Q6GFS7
contig_1	Pyrodigal	gene	1804991	1805434	.	+	.	ID=GCA000160335_01712_gene;locus_tag=GCA000160335_01712;gene=comK
contig_1	Pyrodigal	CDS	1804991	1805434	.	+	0	ID=GCA000160335_01712;Name=Competence protein ComK;locus_tag=GCA000160335_01712;product=Competence protein ComK;gene=comK;Parent=GCA000160335_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001152695.1,SO:0001217,UniParc:UPI00003B1794,UniRef:UniRef100_A0A7Z7QZK4,UniRef:UniRef50_Q2FXF1,UniRef:UniRef90_A0A0U1MP04
contig_1	Pyrodigal	gene	1805421	1805864	.	-	.	ID=GCA000160335_01713_gene;locus_tag=GCA000160335_01713
contig_1	Pyrodigal	CDS	1805421	1805864	.	-	0	ID=GCA000160335_01713;Name=Staphylococcal protein;locus_tag=GCA000160335_01713;product=Staphylococcal protein;Parent=GCA000160335_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001045397.1,SO:0001217,UniParc:UPI0001B700C4,UniRef:UniRef100_UPI0001B700C4,UniRef:UniRef50_Q2FXF0,UniRef:UniRef90_A0A0U1MNK2
contig_1	Pyrodigal	gene	1806162	1806797	.	+	.	ID=GCA000160335_01714_gene;locus_tag=GCA000160335_01714
contig_1	Pyrodigal	CDS	1806162	1806797	.	+	0	ID=GCA000160335_01714;Name=CAAX amino terminal protease self-immunity family protein;locus_tag=GCA000160335_01714;product=CAAX amino terminal protease self-immunity family protein;Parent=GCA000160335_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001168914.1,SO:0001217,UniParc:UPI00003B1796,UniRef:UniRef100_A0A7Z7R0B3,UniRef:UniRef50_Q2FXE9,UniRef:UniRef90_A0A0U1MQD6
contig_1	Pyrodigal	gene	1806964	1807584	.	+	.	ID=GCA000160335_01715_gene;locus_tag=GCA000160335_01715
contig_1	Pyrodigal	CDS	1806964	1807584	.	+	0	ID=GCA000160335_01715;Name=CAAX protease self-immunity family protein;locus_tag=GCA000160335_01715;product=CAAX protease self-immunity family protein;Parent=GCA000160335_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000492901.1,SO:0001217,UniParc:UPI00003B1797,UniRef:UniRef100_A0A7Z7W202,UniRef:UniRef50_Q2FXE9,UniRef:UniRef90_A0A0U1MNS6
contig_1	Pyrodigal	gene	1807983	1808696	.	-	.	ID=GCA000160335_01716_gene;locus_tag=GCA000160335_01716;gene=talA
contig_1	Pyrodigal	CDS	1807983	1808696	.	-	0	ID=GCA000160335_01716;Name=transaldolase;locus_tag=GCA000160335_01716;product=transaldolase;Dbxref=GO:0004801,GO:0006098;gene=talA;Parent=GCA000160335_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,RefSeq:WP_001096494.1,SO:0001217,UniParc:UPI000005435A,UniRef:UniRef100_Q2FXE8,UniRef:UniRef50_A0A0D0SMT5,UniRef:UniRef90_A0A0D0SMT5;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	1808955	1809257	.	+	.	ID=GCA000160335_01717_gene;locus_tag=GCA000160335_01717
contig_1	Pyrodigal	CDS	1808955	1809257	.	+	0	ID=GCA000160335_01717;Name=Membrane protein;locus_tag=GCA000160335_01717;product=Membrane protein;Parent=GCA000160335_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091448.1,SO:0001217,UniParc:UPI0001B70202,UniRef:UniRef100_UPI0001B70202,UniRef:UniRef50_Q5HND2,UniRef:UniRef90_A0A389U3H2
contig_1	Pyrodigal	gene	1809512	1809877	.	+	.	ID=GCA000160335_01718_gene;locus_tag=GCA000160335_01718;gene=crcB
contig_1	Pyrodigal	CDS	1809512	1809877	.	+	0	ID=GCA000160335_01718;Name=fluoride efflux transporter CrcB;locus_tag=GCA000160335_01718;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=crcB;Parent=GCA000160335_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_001200542.1,SO:0001217,UniParc:UPI000069AAEC,UniRef:UniRef100_Q2FXE6,UniRef:UniRef50_Q2FXE6,UniRef:UniRef90_Q2FXE6
contig_1	Pyrodigal	gene	1809874	1810227	.	+	.	ID=GCA000160335_01719_gene;locus_tag=GCA000160335_01719;gene=fluC
contig_1	Pyrodigal	CDS	1809874	1810227	.	+	0	ID=GCA000160335_01719;Name=Fluoride-specific ion channel FluC;locus_tag=GCA000160335_01719;product=Fluoride-specific ion channel FluC;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=fluC;Parent=GCA000160335_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_000623481.1,SO:0001217,UniParc:UPI00003B1799,UniRef:UniRef100_Q6GFR9,UniRef:UniRef50_Q2FXE5,UniRef:UniRef90_Q2FXE5
contig_1	Pyrodigal	gene	1810477	1811310	.	-	.	ID=GCA000160335_01720_gene;locus_tag=GCA000160335_01720;gene=aRA1
contig_1	Pyrodigal	CDS	1810477	1811310	.	-	0	ID=GCA000160335_01720;Name=Aldo/keto reductase family protein;locus_tag=GCA000160335_01720;product=Aldo/keto reductase family protein;gene=aRA1;Parent=GCA000160335_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000453316.1,SO:0001217,UniParc:UPI00019CD6B7,UniRef:UniRef100_A0A7Z7QZK3,UniRef:UniRef50_B9DN15,UniRef:UniRef90_A0A0H2J452
contig_1	Pyrodigal	gene	1811522	1812430	.	-	.	ID=GCA000160335_01721_gene;locus_tag=GCA000160335_01721
contig_1	Pyrodigal	CDS	1811522	1812430	.	-	0	ID=GCA000160335_01721;Name=NERD domain-containing protein;locus_tag=GCA000160335_01721;product=NERD domain-containing protein;Parent=GCA000160335_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366165.1,SO:0001217,UniParc:UPI00019CD6B8,UniRef:UniRef100_A0A7U7ID56,UniRef:UniRef50_Q2G1W5,UniRef:UniRef90_Q2G1W5
contig_1	Pyrodigal	gene	1812555	1813748	.	-	.	ID=GCA000160335_01722_gene;locus_tag=GCA000160335_01722;gene=metK
contig_1	Pyrodigal	CDS	1812555	1813748	.	-	0	ID=GCA000160335_01722;Name=methionine adenosyltransferase;locus_tag=GCA000160335_01722;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000160335_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_000933819.1,SO:0001217,UniParc:UPI00003B179C,UniRef:UniRef100_P66766,UniRef:UniRef50_P72871,UniRef:UniRef90_Q2G1W4;ec_number=2.5.1.6
contig_1	Infernal	regulatory_region	1813854	1813965	2e-13	-	.	ID=HBCHLJIIAO_161;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1814120	1815712	.	+	.	ID=GCA000160335_01723_gene;locus_tag=GCA000160335_01723;gene=pckA
contig_1	Pyrodigal	CDS	1814120	1815712	.	+	0	ID=GCA000160335_01723;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA000160335_01723;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA000160335_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,KEGG:K01610,RefSeq:WP_000109909.1,SO:0001217,UniParc:UPI00003B179D,UniRef:UniRef100_Q6GFR5,UniRef:UniRef50_Q2G1W2,UniRef:UniRef90_Q2G1W2;ec_number=4.1.1.49
contig_1	Pyrodigal	gene	1816005	1816775	.	-	.	ID=GCA000160335_01724_gene;locus_tag=GCA000160335_01724;gene=dAP2
contig_1	Pyrodigal	CDS	1816005	1816775	.	-	0	ID=GCA000160335_01724;Name=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;locus_tag=GCA000160335_01724;product=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;gene=dAP2;Parent=GCA000160335_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1506,COG:E,SO:0001217,UniParc:UPI00003B179E,UniRef:UniRef100_A0A7Z7QZI3,UniRef:UniRef50_Q2G2V6,UniRef:UniRef90_Q2G2V6
contig_1	Pyrodigal	gene	1816756	1817235	.	-	.	ID=GCA000160335_01725_gene;locus_tag=GCA000160335_01725;gene=ytkD
contig_1	Pyrodigal	CDS	1816756	1817235	.	-	0	ID=GCA000160335_01725;Name=RNA deprotection pyrophosphohydrolase;locus_tag=GCA000160335_01725;product=RNA deprotection pyrophosphohydrolase;Dbxref=GO:0006139,GO:0017111;gene=ytkD;Parent=GCA000160335_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,SO:0001217,UniParc:UPI00003B179F,UniRef:UniRef100_A0A0E1X443,UniRef:UniRef50_A0A0D6XNS6,UniRef:UniRef90_Q2G2V5
contig_1	Pyrodigal	gene	1817295	1817552	.	+	.	ID=GCA000160335_01726_gene;locus_tag=GCA000160335_01726;gene=yidD
contig_1	Pyrodigal	CDS	1817295	1817552	.	+	0	ID=GCA000160335_01726;Name=membrane protein insertion efficiency factor YidD;locus_tag=GCA000160335_01726;product=membrane protein insertion efficiency factor YidD;Dbxref=GO:0005886;gene=yidD;Parent=GCA000160335_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0759,COG:M,KEGG:K08998,RefSeq:WP_000718107.1,SO:0001217,UniParc:UPI000013B193,UniRef:UniRef100_Q2G2V4,UniRef:UniRef50_Q2G2V4,UniRef:UniRef90_Q2G2V4
contig_1	Pyrodigal	gene	1817549	1818550	.	-	.	ID=GCA000160335_01727_gene;locus_tag=GCA000160335_01727;gene=menC
contig_1	Pyrodigal	CDS	1817549	1818550	.	-	0	ID=GCA000160335_01727;Name=o-succinylbenzoate synthase;locus_tag=GCA000160335_01727;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016829,GO:0043748;gene=menC;Parent=GCA000160335_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,RefSeq:WP_000778539.1,SO:0001217,UniParc:UPI00003B17A0,UniRef:UniRef100_A0A0E1X489,UniRef:UniRef50_A0A0H2WWB5,UniRef:UniRef90_A0A0H2WWB5;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	1818555	1820033	.	-	.	ID=GCA000160335_01728_gene;locus_tag=GCA000160335_01728;gene=menE
contig_1	Pyrodigal	CDS	1818555	1820033	.	-	0	ID=GCA000160335_01728;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000160335_01728;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA000160335_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000348372.1,SO:0001217,UniParc:UPI00003B17A1,UniRef:UniRef100_Q6GFR0,UniRef:UniRef50_Q2G2V3,UniRef:UniRef90_Q2G2V3;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	1820192	1820674	.	-	.	ID=GCA000160335_01729_gene;locus_tag=GCA000160335_01729
contig_1	Pyrodigal	CDS	1820192	1820674	.	-	0	ID=GCA000160335_01729;Name=DUF4909 domain-containing protein;locus_tag=GCA000160335_01729;product=DUF4909 domain-containing protein;Parent=GCA000160335_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B17A2,UniRef:UniRef100_A0A166NDJ1,UniRef:UniRef50_Q2G2Y6,UniRef:UniRef90_Q2G2Y6
contig_1	Pyrodigal	gene	1820986	1821600	.	+	.	ID=GCA000160335_01730_gene;locus_tag=GCA000160335_01730
contig_1	Pyrodigal	CDS	1820986	1821600	.	+	0	ID=GCA000160335_01730;Name=Endonuclease;locus_tag=GCA000160335_01730;product=Endonuclease;Parent=GCA000160335_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001EFF177,UniRef:UniRef100_A0A0Z4Y4H0,UniRef:UniRef50_A0A380E5B9,UniRef:UniRef90_A0A380E5B9
contig_1	Pyrodigal	gene	1821681	1822676	.	+	.	ID=GCA000160335_01731_gene;locus_tag=GCA000160335_01731;gene=yokF
contig_1	Pyrodigal	CDS	1821681	1822676	.	+	0	ID=GCA000160335_01731;Name=SPBc2 prophage-derived endonuclease yokF;locus_tag=GCA000160335_01731;product=SPBc2 prophage-derived endonuclease yokF;gene=yokF;Parent=GCA000160335_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070654.1,SO:0001217,UniParc:UPI00003B17A4,UniRef:UniRef100_A0A7Z7W257,UniRef:UniRef50_A0A7Z7W257,UniRef:UniRef90_A0A7Z7W257
contig_1	Pyrodigal	gene	1822752	1823378	.	+	.	ID=GCA000160335_01732_gene;locus_tag=GCA000160335_01732
contig_1	Pyrodigal	CDS	1822752	1823378	.	+	0	ID=GCA000160335_01732;Name=Lipoprotein;locus_tag=GCA000160335_01732;product=Lipoprotein;Parent=GCA000160335_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669038.1,SO:0001217,UniParc:UPI00003B17A5,UniRef:UniRef100_A0A7Z7W2F0,UniRef:UniRef50_Q2G2Y5,UniRef:UniRef90_Q2G2Y5
contig_1	Pyrodigal	gene	1823419	1823763	.	+	.	ID=GCA000160335_01733_gene;locus_tag=GCA000160335_01733
contig_1	Pyrodigal	CDS	1823419	1823763	.	+	0	ID=GCA000160335_01733;Name=DUF3969 domain-containing protein;locus_tag=GCA000160335_01733;product=DUF3969 domain-containing protein;Parent=GCA000160335_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000627550.1,SO:0001217,UniParc:UPI00003B17A6,UniRef:UniRef100_A0A7Z7W207,UniRef:UniRef50_Q2G2Y2,UniRef:UniRef90_Q2G2Y2
contig_1	Pyrodigal	gene	1823861	1824433	.	+	.	ID=GCA000160335_01734_gene;locus_tag=GCA000160335_01734
contig_1	Pyrodigal	CDS	1823861	1824433	.	+	0	ID=GCA000160335_01734;Name=Phage protein;locus_tag=GCA000160335_01734;product=Phage protein;Parent=GCA000160335_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414222.1,SO:0001217,UniParc:UPI00003B17A7,UniRef:UniRef100_A0A0E1X6K9,UniRef:UniRef50_Q2FXE1,UniRef:UniRef90_Q2FXE1
contig_1	Pyrodigal	gene	1824582	1825949	.	-	.	ID=GCA000160335_01735_gene;locus_tag=GCA000160335_01735
contig_1	Pyrodigal	CDS	1824582	1825949	.	-	0	ID=GCA000160335_01735;Name=FRG domain;locus_tag=GCA000160335_01735;product=FRG domain;Parent=GCA000160335_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093574.1,SO:0001217,UniParc:UPI00003B17A8,UniRef:UniRef100_A0A166N477,UniRef:UniRef50_A0A166N477,UniRef:UniRef90_A0A166N477
contig_1	Pyrodigal	gene	1825949	1826518	.	-	.	ID=GCA000160335_01736_gene;locus_tag=GCA000160335_01736
contig_1	Pyrodigal	CDS	1825949	1826518	.	-	0	ID=GCA000160335_01736;Name=DUF955 domain-containing protein;locus_tag=GCA000160335_01736;product=DUF955 domain-containing protein;Parent=GCA000160335_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000125075.1,SO:0001217,UniParc:UPI00003B17A9,UniRef:UniRef100_A0A7Z7QZE9,UniRef:UniRef50_A0A8G2HZI4,UniRef:UniRef90_A0A8G2HZI4
contig_1	Pyrodigal	gene	1826711	1827157	.	-	.	ID=GCA000160335_01737_gene;locus_tag=GCA000160335_01737
contig_1	Pyrodigal	CDS	1826711	1827157	.	-	0	ID=GCA000160335_01737;Name=DUF1433 domain-containing protein;locus_tag=GCA000160335_01737;product=DUF1433 domain-containing protein;Parent=GCA000160335_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000747804.1,SO:0001217,UniParc:UPI00003B17AA,UniRef:UniRef100_A0A0E1X481,UniRef:UniRef50_A0A1J3ZY30,UniRef:UniRef90_A0A0E1X481
contig_1	Pyrodigal	gene	1827239	1827463	.	-	.	ID=GCA000160335_01738_gene;locus_tag=GCA000160335_01738
contig_1	Pyrodigal	CDS	1827239	1827463	.	-	0	ID=GCA000160335_01738;Name=Transposase;locus_tag=GCA000160335_01738;product=Transposase;Parent=GCA000160335_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD6F8,UniRef:UniRef100_A0A7Z7QZJ0,UniRef:UniRef50_A0A7Z7QZJ0,UniRef:UniRef90_A0A7Z7QZJ0
contig_1	Infernal	gene	1827651	1827745	.	-	.	ID=GCA000160335_01739_gene;locus_tag=GCA000160335_01739;gene=fstAT
contig_1	Infernal	ncRNA	1827651	1827745	1.6e-14	-	.	ID=GCA000160335_01739;Name=Fst antitoxin sRNA;locus_tag=GCA000160335_01739;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000160335_01739_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	1828102	1828545	.	-	.	ID=GCA000160335_01740_gene;locus_tag=GCA000160335_01740
contig_1	Pyrodigal	CDS	1828102	1828545	.	-	0	ID=GCA000160335_01740;Name=Exported protein;locus_tag=GCA000160335_01740;product=Exported protein;Parent=GCA000160335_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037039.1,SO:0001217,UniParc:UPI00019CD6F9,UniRef:UniRef100_A0A7U7EVP4,UniRef:UniRef50_A0A1J3ZY30,UniRef:UniRef90_A0A7U7EVP4
contig_1	Pyrodigal	gene	1828545	1828988	.	-	.	ID=GCA000160335_01741_gene;locus_tag=GCA000160335_01741
contig_1	Pyrodigal	CDS	1828545	1828988	.	-	0	ID=GCA000160335_01741;Name=DUF1433 domain-containing protein;locus_tag=GCA000160335_01741;product=DUF1433 domain-containing protein;Parent=GCA000160335_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000731421.1,SO:0001217,UniParc:UPI00019CD6FA,UniRef:UniRef100_A0A7Z7R035,UniRef:UniRef50_A0A1J3ZY30,UniRef:UniRef90_A0A7Z1MZV4
contig_1	Pyrodigal	gene	1828988	1829308	.	-	.	ID=GCA000160335_01742_gene;locus_tag=GCA000160335_01742
contig_1	Pyrodigal	CDS	1828988	1829308	.	-	0	ID=GCA000160335_01742;Name=Lipoprotein;locus_tag=GCA000160335_01742;product=Lipoprotein;Parent=GCA000160335_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573978.1,SO:0001217,UniParc:UPI0002C96896,UniRef:UniRef100_A0A7Z7QZM5,UniRef:UniRef50_A0A0E1X426,UniRef:UniRef90_A0A0E1X426
contig_1	Pyrodigal	gene	1829955	1832375	.	+	.	ID=GCA000160335_01743_gene;locus_tag=GCA000160335_01743
contig_1	Pyrodigal	CDS	1829955	1832375	.	+	0	ID=GCA000160335_01743;Name=Hyaluronate lyase;locus_tag=GCA000160335_01743;product=Hyaluronate lyase;Parent=GCA000160335_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01727,RefSeq:WP_000182551.1,SO:0001217,UniParc:UPI00019F4CAA,UniRef:UniRef100_UPI00019F4CAA,UniRef:UniRef50_Q59801,UniRef:UniRef90_A0A2S6DIG0;ec_number=4.2.2.1
contig_1	Pyrodigal	gene	1832501	1832878	.	-	.	ID=GCA000160335_01744_gene;locus_tag=GCA000160335_01744
contig_1	Pyrodigal	CDS	1832501	1832878	.	-	0	ID=GCA000160335_01744;Name=DUF1433 domain-containing protein;locus_tag=GCA000160335_01744;product=DUF1433 domain-containing protein;Parent=GCA000160335_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001036446.1,SO:0001217,UniParc:UPI0002FCDCBE,UniRef:UniRef100_UPI0002FCDCBE,UniRef:UniRef50_A0A2K4FCP2,UniRef:UniRef90_A0A5S9C6M7
contig_1	Pyrodigal	gene	1833088	1833537	.	-	.	ID=GCA000160335_01745_gene;locus_tag=GCA000160335_01745
contig_1	Pyrodigal	CDS	1833088	1833537	.	-	0	ID=GCA000160335_01745;Name=Exported protein;locus_tag=GCA000160335_01745;product=Exported protein;Parent=GCA000160335_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000619920.1,SO:0001217,UniParc:UPI00003B17AF,UniRef:UniRef100_A0A7Z7W2F4,UniRef:UniRef50_A0A7Z7R0G1,UniRef:UniRef90_A0A7Z7W2F4
contig_1	Pyrodigal	gene	1833580	1833957	.	+	.	ID=GCA000160335_01746_gene;locus_tag=GCA000160335_01746;pseudogene=unitary
contig_1	Pyrodigal	CDS	1833580	1833957	.	+	0	ID=GCA000160335_01746;Name=hypothetical protein;locus_tag=GCA000160335_01746;product=hypothetical protein;pseudogene=unitary;Parent=GCA000160335_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2C6WES1,UniRef:UniRef50_A0A5S9I537,UniRef:UniRef90_A0A5S9I537
contig_1	Pyrodigal	gene	1833932	1835191	.	+	.	ID=GCA000160335_01747_gene;locus_tag=GCA000160335_01747;pseudogene=unitary
contig_1	Pyrodigal	CDS	1833932	1835191	.	+	0	ID=GCA000160335_01747;Name=Pathogenicity island protein;locus_tag=GCA000160335_01747;product=Pathogenicity island protein;pseudogene=unitary;Parent=GCA000160335_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2S1FUK0,UniRef:UniRef90_A0A8G2HW45
contig_1	Pyrodigal	gene	1835206	1835505	.	+	.	ID=GCA000160335_01748_gene;locus_tag=GCA000160335_01748
contig_1	Pyrodigal	CDS	1835206	1835505	.	+	0	ID=GCA000160335_01748;Name=Secretion protein;locus_tag=GCA000160335_01748;product=Secretion protein;Parent=GCA000160335_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000095390.1,SO:0001217,UniParc:UPI00003B17B1,UniRef:UniRef100_A0A7Z7W3A0,UniRef:UniRef50_A0A0U1MW30,UniRef:UniRef90_A0A0U1MW30
contig_1	Pyrodigal	gene	1835767	1836927	.	-	.	ID=GCA000160335_01749_gene;locus_tag=GCA000160335_01749
contig_1	Pyrodigal	CDS	1835767	1836927	.	-	0	ID=GCA000160335_01749;Name=hypothetical protein;locus_tag=GCA000160335_01749;product=hypothetical protein;Parent=GCA000160335_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230947.1,SO:0001217,UniParc:UPI0001B700C8,UniRef:UniRef100_UPI0001B700C8,UniRef:UniRef50_UPI0001B700C8,UniRef:UniRef90_UPI0001B700C8
contig_1	Pyrodigal	gene	1836914	1837585	.	-	.	ID=GCA000160335_01750_gene;locus_tag=GCA000160335_01750
contig_1	Pyrodigal	CDS	1836914	1837585	.	-	0	ID=GCA000160335_01750;Name=KAP family P-loop domain;locus_tag=GCA000160335_01750;product=KAP family P-loop domain;Parent=GCA000160335_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025173854.1,SO:0001217,UniParc:UPI00030E2DAF,UniRef:UniRef100_UPI002E198EB5,UniRef:UniRef50_A0A7Z7QZM1,UniRef:UniRef90_A0A7Z7QZM1
contig_1	Pyrodigal	gene	1837928	1838776	.	-	.	ID=GCA000160335_01751_gene;locus_tag=GCA000160335_01751
contig_1	Pyrodigal	CDS	1837928	1838776	.	-	0	ID=GCA000160335_01751;Name=restriction endonuclease subunit S;locus_tag=GCA000160335_01751;product=restriction endonuclease subunit S;Parent=GCA000160335_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0021A9B033
contig_1	Pyrodigal	gene	1838769	1840325	.	-	.	ID=GCA000160335_01752_gene;locus_tag=GCA000160335_01752
contig_1	Pyrodigal	CDS	1838769	1840325	.	-	0	ID=GCA000160335_01752;Name=type I restriction-modification system subunit M;locus_tag=GCA000160335_01752;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;Parent=GCA000160335_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_000028587.1,SO:0001217,UniParc:UPI00003B17B4,UniRef:UniRef100_A0A0E1X415,UniRef:UniRef50_A0A0E1X415,UniRef:UniRef90_A0A0E1X415;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	1840688	1841407	.	-	.	ID=GCA000160335_01753_gene;locus_tag=GCA000160335_01753;gene=splF
contig_1	Pyrodigal	CDS	1840688	1841407	.	-	0	ID=GCA000160335_01753;Name=serine protease SplF;locus_tag=GCA000160335_01753;product=serine protease SplF;Dbxref=GO:0005576,GO:0006508,GO:0008236;gene=splF;Parent=GCA000160335_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038688,COG:COG3591,COG:O,RefSeq:WP_001038742.1,SO:0001217,UniParc:UPI00019CD702,UniRef:UniRef100_A0A7Z7QZG2,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC8;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1841577	1842293	.	-	.	ID=GCA000160335_01754_gene;locus_tag=GCA000160335_01754;gene=splE
contig_1	Pyrodigal	CDS	1841577	1842293	.	-	0	ID=GCA000160335_01754;Name=serine protease SplE;locus_tag=GCA000160335_01754;product=serine protease SplE;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splE;Parent=GCA000160335_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038759,NCBIProtein:ABD30999.1,RefSeq:WP_001038734.1,SO:0001217,UniParc:UPI00003B17B5,UniRef:UniRef100_Q6GFP0,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC7;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1842457	1843173	.	-	.	ID=GCA000160335_01755_gene;locus_tag=GCA000160335_01755
contig_1	Pyrodigal	CDS	1842457	1843173	.	-	0	ID=GCA000160335_01755;Name=Serine protease;locus_tag=GCA000160335_01755;product=Serine protease;Parent=GCA000160335_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001038730.1,SO:0001217,UniParc:UPI0001B700F8,UniRef:UniRef100_A0A7Z7QZU4,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_A0A8G2M8Y9
contig_1	Pyrodigal	gene	1843340	1844056	.	-	.	ID=GCA000160335_01756_gene;locus_tag=GCA000160335_01756
contig_1	Pyrodigal	CDS	1843340	1844056	.	-	0	ID=GCA000160335_01756;Name=Serine protease;locus_tag=GCA000160335_01756;product=Serine protease;Parent=GCA000160335_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001038766.1,SO:0001217,UniParc:UPI00003B17B6,UniRef:UniRef100_A0A0E1X411,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_A0AAN1ZME0
contig_1	Pyrodigal	gene	1844180	1844899	.	-	.	ID=GCA000160335_01757_gene;locus_tag=GCA000160335_01757;gene=splC
contig_1	Pyrodigal	CDS	1844180	1844899	.	-	0	ID=GCA000160335_01757;Name=serine protease SplC;locus_tag=GCA000160335_01757;product=serine protease SplC;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splC;Parent=GCA000160335_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038867,COG:COG3591,COG:O,RefSeq:WP_001039022.1,SO:0001217,UniParc:UPI00003B17B7,UniRef:UniRef100_Q6GFN8,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC4;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1844957	1845121	.	-	.	ID=GCA000160335_01758_gene;locus_tag=GCA000160335_01758;gene=splB
contig_1	Pyrodigal	CDS	1844957	1845121	.	-	0	ID=GCA000160335_01758;Name=SplB protein;locus_tag=GCA000160335_01758;product=SplB protein;gene=splB;Parent=GCA000160335_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580289.1,SO:0001217,UniParc:UPI00019CD706,UniRef:UniRef100_A0A7Z7R0H9,UniRef:UniRef50_A0A380E5J8,UniRef:UniRef90_A0A7Z7R0H9
contig_1	Pyrodigal	gene	1845914	1846429	.	+	.	ID=GCA000160335_01759_gene;locus_tag=GCA000160335_01759
contig_1	Pyrodigal	CDS	1845914	1846429	.	+	0	ID=GCA000160335_01759;Name=hypothetical protein;locus_tag=GCA000160335_01759;product=hypothetical protein;Parent=GCA000160335_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595635.1,SO:0001217,UniParc:UPI00003B17BA,UniRef:UniRef100_A0A7Z7R0E5,UniRef:UniRef50_A0A8G2M7F6,UniRef:UniRef90_A0A8G2M7F6
contig_1	Pyrodigal	gene	1846677	1848023	.	+	.	ID=GCA000160335_01760_gene;locus_tag=GCA000160335_01760
contig_1	Pyrodigal	CDS	1846677	1848023	.	+	0	ID=GCA000160335_01760;Name=Exported protein;locus_tag=GCA000160335_01760;product=Exported protein;Parent=GCA000160335_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000711497.1,SO:0001217,UniParc:UPI00019F4CA2,UniRef:UniRef100_A0A2W3AI05,UniRef:UniRef50_A0A2W3AI05,UniRef:UniRef90_A0A2W3AI05
contig_1	Pyrodigal	gene	1848610	1848846	.	+	.	ID=GCA000160335_01761_gene;locus_tag=GCA000160335_01761
contig_1	Pyrodigal	CDS	1848610	1848846	.	+	0	ID=GCA000160335_01761;Name=DUF4160 domain-containing protein;locus_tag=GCA000160335_01761;product=DUF4160 domain-containing protein;Parent=GCA000160335_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000617706.1,SO:0001217,UniParc:UPI00003B17BC,UniRef:UniRef100_A0A7Z7W267,UniRef:UniRef50_A0A7Z7W267,UniRef:UniRef90_A0A7Z7W267
contig_1	Pyrodigal	gene	1848867	1849181	.	+	.	ID=GCA000160335_01762_gene;locus_tag=GCA000160335_01762
contig_1	Pyrodigal	CDS	1848867	1849181	.	+	0	ID=GCA000160335_01762;Name=DUF1828 domain-containing protein;locus_tag=GCA000160335_01762;product=DUF1828 domain-containing protein;Parent=GCA000160335_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002505428,UniRef:UniRef100_A0A7Z7W2F7,UniRef:UniRef50_A0A6N2YQA1,UniRef:UniRef90_A0AA40JP27
contig_1	Pyrodigal	gene	1849221	1849643	.	+	.	ID=GCA000160335_01763_gene;locus_tag=GCA000160335_01763
contig_1	Pyrodigal	CDS	1849221	1849643	.	+	0	ID=GCA000160335_01763;Name=DUF1829 domain-containing protein;locus_tag=GCA000160335_01763;product=DUF1829 domain-containing protein;Parent=GCA000160335_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD73F,UniRef:UniRef100_A0A7Z7W216,UniRef:UniRef50_A0A7Z7W216,UniRef:UniRef90_A0A7Z7W216
contig_1	Pyrodigal	gene	1850218	1850994	.	-	.	ID=GCA000160335_01764_gene;locus_tag=GCA000160335_01764;gene=seg
contig_1	Pyrodigal	CDS	1850218	1850994	.	-	0	ID=GCA000160335_01764;Name=staphylococcal enterotoxin type G;locus_tag=GCA000160335_01764;product=staphylococcal enterotoxin type G;Dbxref=GO:0005576,GO:0090729;gene=seg;Parent=GCA000160335_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031927817,KEGG:K11040,RefSeq:WP_000736707.1,SO:0001217,UniParc:UPI00003B17BD,UniRef:UniRef100_A0A7Z7W3A5,UniRef:UniRef50_P0A0L6,UniRef:UniRef90_P0A0L6
contig_1	Pyrodigal	gene	1851278	1852033	.	-	.	ID=GCA000160335_01765_gene;locus_tag=GCA000160335_01765;gene=sen
contig_1	Pyrodigal	CDS	1851278	1852033	.	-	0	ID=GCA000160335_01765;Name=staphylococcal enterotoxin type N;locus_tag=GCA000160335_01765;product=staphylococcal enterotoxin type N;gene=sen;Parent=GCA000160335_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001622180,KEGG:K11040,NCBIProtein:SAO78304.1,RefSeq:WP_001235656.1,SO:0001217,UniParc:UPI00001D8A07,UniRef:UniRef100_A0A7Z7QZM8,UniRef:UniRef50_A0A077UKB1,UniRef:UniRef90_A0A7Z7QZM8
contig_1	Pyrodigal	gene	1852072	1852857	.	-	.	ID=GCA000160335_01766_gene;locus_tag=GCA000160335_01766;gene=seu
contig_1	Pyrodigal	CDS	1852072	1852857	.	-	0	ID=GCA000160335_01766;Name=staphylococcal enterotoxin type U;locus_tag=GCA000160335_01766;product=staphylococcal enterotoxin type U;gene=seu;Parent=GCA000160335_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031927818,KEGG:K11040,NCBIProtein:SGR88168.1,RefSeq:WP_000764684.1,SO:0001217,UniParc:UPI00001D8A06,UniRef:UniRef100_A0A7Z7R059,UniRef:UniRef50_Q6XXM4,UniRef:UniRef90_Q6XXM4
contig_1	Pyrodigal	gene	1853011	1853739	.	-	.	ID=GCA000160335_01767_gene;locus_tag=GCA000160335_01767;gene=sei
contig_1	Pyrodigal	CDS	1853011	1853739	.	-	0	ID=GCA000160335_01767;Name=staphylococcal enterotoxin type I;locus_tag=GCA000160335_01767;product=staphylococcal enterotoxin type I;gene=sei;Parent=GCA000160335_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_031927819,KEGG:K11040,NCBIProtein:SGR88193.1,RefSeq:WP_000721567.1,SO:0001217,UniParc:UPI00001D8A05,UniRef:UniRef100_A0A7Z7QZG4,UniRef:UniRef50_Q9F0L7,UniRef:UniRef90_O85383
contig_1	Pyrodigal	gene	1853774	1854493	.	-	.	ID=GCA000160335_01768_gene;locus_tag=GCA000160335_01768;gene=sem
contig_1	Pyrodigal	CDS	1853774	1854493	.	-	0	ID=GCA000160335_01768;Name=staphylococcal enterotoxin type M;locus_tag=GCA000160335_01768;product=staphylococcal enterotoxin type M;gene=sem;Parent=GCA000160335_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_058008129,NCBIProtein:SGR88215.1,RefSeq:WP_000821662.1,SO:0001217,UniParc:UPI0001B7003A,UniRef:UniRef100_UPI0001B7003A,UniRef:UniRef50_Q9F0L7,UniRef:UniRef90_A0A8G2HW27
contig_1	Pyrodigal	gene	1854775	1855539	.	-	.	ID=GCA000160335_01769_gene;locus_tag=GCA000160335_01769
contig_1	Pyrodigal	CDS	1854775	1855539	.	-	0	ID=GCA000160335_01769;Name=Enterotoxin O;locus_tag=GCA000160335_01769;product=Enterotoxin O;Parent=GCA000160335_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11040,RefSeq:WP_000935739.1,SO:0001217,UniParc:UPI00003B17BF,UniRef:UniRef100_A0A7Z7QZK5,UniRef:UniRef50_A0A8G2HX54,UniRef:UniRef90_A0A8G2HX54
contig_1	tRNAscan-SE	gene	1855786	1855874	.	-	.	ID=GCA000160335_01770_gene;locus_tag=GCA000160335_01770;gene=trnS
contig_1	tRNAscan-SE	tRNA	1855786	1855874	.	-	.	ID=GCA000160335_01770;Name=tRNA-Ser(gga);locus_tag=GCA000160335_01770;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000160335_01770_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1855929	1856000	.	-	.	ID=GCA000160335_01771_gene;locus_tag=GCA000160335_01771;gene=trnE
contig_1	tRNAscan-SE	tRNA	1855929	1856000	.	-	.	ID=GCA000160335_01771;Name=tRNA-Glu(ttc);locus_tag=GCA000160335_01771;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000160335_01771_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	1856002	1856076	.	-	.	ID=GCA000160335_01772_gene;locus_tag=GCA000160335_01772;gene=trnN
contig_1	tRNAscan-SE	tRNA	1856002	1856076	.	-	.	ID=GCA000160335_01772;Name=tRNA-Asn(gtt);locus_tag=GCA000160335_01772;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000160335_01772_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	tRNAscan-SE	gene	1856091	1856164	.	-	.	ID=GCA000160335_01773_gene;locus_tag=GCA000160335_01773;gene=trnG
contig_1	tRNAscan-SE	tRNA	1856091	1856164	.	-	.	ID=GCA000160335_01773;Name=tRNA-Gly(tcc);locus_tag=GCA000160335_01773;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000160335_01773_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1856180	1856255	.	-	.	ID=GCA000160335_01774_gene;locus_tag=GCA000160335_01774;gene=trnH
contig_1	tRNAscan-SE	tRNA	1856180	1856255	.	-	.	ID=GCA000160335_01774;Name=tRNA-His(gtg);locus_tag=GCA000160335_01774;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000160335_01774_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	1856269	1856341	.	-	.	ID=GCA000160335_01775_gene;locus_tag=GCA000160335_01775;gene=trnF
contig_1	tRNAscan-SE	tRNA	1856269	1856341	.	-	.	ID=GCA000160335_01775;Name=tRNA-Phe(gaa);locus_tag=GCA000160335_01775;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000160335_01775_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	1856358	1856433	.	-	.	ID=GCA000160335_01776_gene;locus_tag=GCA000160335_01776;gene=trnD
contig_1	tRNAscan-SE	tRNA	1856358	1856433	.	-	.	ID=GCA000160335_01776;Name=tRNA-Asp(gtc);locus_tag=GCA000160335_01776;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000160335_01776_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1856455	1856528	.	-	.	ID=GCA000160335_01777_gene;locus_tag=GCA000160335_01777;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1856455	1856528	.	-	.	ID=GCA000160335_01777;Name=tRNA-fMet(cat);locus_tag=GCA000160335_01777;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000160335_01777_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Infernal	gene	1856509	1856603	.	-	.	ID=GCA000160335_01778_gene;locus_tag=GCA000160335_01778;gene=S774
contig_1	Infernal	ncRNA	1856509	1856603	4.3e-15	-	.	ID=GCA000160335_01778;Name=Staphylococcus sRNA 774;locus_tag=GCA000160335_01778;product=Staphylococcus sRNA 774;Dbxref=RFAM:RF02896;Parent=GCA000160335_01778_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02896
contig_1	Pyrodigal	gene	1857000	1857554	.	-	.	ID=GCA000160335_01779_gene;locus_tag=GCA000160335_01779;gene=ydeN
contig_1	Pyrodigal	CDS	1857000	1857554	.	-	0	ID=GCA000160335_01779;Name=Serine hydrolase family protein;locus_tag=GCA000160335_01779;product=Serine hydrolase family protein;gene=ydeN;Parent=GCA000160335_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3545,COG:R,RefSeq:WP_000132893.1,SO:0001217,UniParc:UPI00003B17C0,UniRef:UniRef100_A0A0E1X3Z6,UniRef:UniRef50_Q2FXA7,UniRef:UniRef90_Q2FXA7
contig_1	Pyrodigal	gene	1857874	1859274	.	-	.	ID=GCA000160335_01780_gene;locus_tag=GCA000160335_01780;gene=hemY
contig_1	Pyrodigal	CDS	1857874	1859274	.	-	0	ID=GCA000160335_01780;Name=protoporphyrinogen oxidase;locus_tag=GCA000160335_01780;product=protoporphyrinogen oxidase;Dbxref=GO:0004729,GO:0005737,GO:0006779,GO:0006783,GO:0016491;gene=hemY;Parent=GCA000160335_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1232,COG:H,RefSeq:WP_000167535.1,SO:0001217,UniParc:UPI00003B17C1,UniRef:UniRef100_A0AAJ4YX77,UniRef:UniRef50_Q2FXA5,UniRef:UniRef90_Q2FXA5;ec_number=1.3.3.4
contig_1	Pyrodigal	gene	1859298	1860221	.	-	.	ID=GCA000160335_01781_gene;locus_tag=GCA000160335_01781;gene=hemH
contig_1	Pyrodigal	CDS	1859298	1860221	.	-	0	ID=GCA000160335_01781;Name=ferrochelatase;locus_tag=GCA000160335_01781;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0006779,GO:0006783,GO:0046872;gene=hemH;Parent=GCA000160335_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_000162875.1,SO:0001217,UniParc:UPI00019F4C9E,UniRef:UniRef100_A0A7Z7R0I6,UniRef:UniRef50_P32396,UniRef:UniRef90_Q2FXA4;ec_number=4.99.1.9
contig_1	Pyrodigal	gene	1860279	1861316	.	-	.	ID=GCA000160335_01782_gene;locus_tag=GCA000160335_01782;gene=hemE
contig_1	Pyrodigal	CDS	1860279	1861316	.	-	0	ID=GCA000160335_01782;Name=uroporphyrinogen decarboxylase;locus_tag=GCA000160335_01782;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0005829,GO:0006779,GO:0006782;gene=hemE;Parent=GCA000160335_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0407,COG:H,KEGG:K01599,RefSeq:WP_000233541.1,SO:0001217,UniParc:UPI00003B17C3,UniRef:UniRef100_Q6GFM3,UniRef:UniRef50_P32395,UniRef:UniRef90_Q2FXA3;ec_number=4.1.1.37
contig_1	Pyrodigal	gene	1861578	1862081	.	+	.	ID=GCA000160335_01783_gene;locus_tag=GCA000160335_01783;gene=traP
contig_1	Pyrodigal	CDS	1861578	1862081	.	+	0	ID=GCA000160335_01783;Name=signal transduction protein TRAP;locus_tag=GCA000160335_01783;product=signal transduction protein TRAP;Dbxref=GO:0016020;gene=traP;Parent=GCA000160335_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000737976,BlastRules:WP_001829811,RefSeq:WP_000737981.1,SO:0001217,UniParc:UPI0001B70230,UniRef:UniRef100_UPI0001B70230,UniRef:UniRef50_Q2G2F3,UniRef:UniRef90_Q6GFM2
contig_1	Pyrodigal	gene	1862205	1863428	.	-	.	ID=GCA000160335_01784_gene;locus_tag=GCA000160335_01784;gene=ecsB
contig_1	Pyrodigal	CDS	1862205	1863428	.	-	0	ID=GCA000160335_01784;Name=ABC transporter permease EcsB;locus_tag=GCA000160335_01784;product=ABC transporter permease EcsB;gene=ecsB;Parent=GCA000160335_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4473,COG:U,KEGG:K25157,RefSeq:WP_001245764.1,SO:0001217,UniParc:UPI00019F4C8E,UniRef:UniRef100_A0A7Z7W272,UniRef:UniRef50_Q2G2F2,UniRef:UniRef90_Q2G2F2
contig_1	Pyrodigal	gene	1863421	1864161	.	-	.	ID=GCA000160335_01785_gene;locus_tag=GCA000160335_01785;gene=rbbA
contig_1	Pyrodigal	CDS	1863421	1864161	.	-	0	ID=GCA000160335_01785;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_01785;product=ABC transporter ATP-binding protein;gene=rbbA;Parent=GCA000160335_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000216874.1,SO:0001217,UniParc:UPI00000CABDD,UniRef:UniRef100_A0A7Z7W2G2,UniRef:UniRef50_A0A0M9FN87,UniRef:UniRef90_A0A8G2HXZ9
contig_1	Pyrodigal	gene	1864295	1864717	.	+	.	ID=GCA000160335_01786_gene;locus_tag=GCA000160335_01786;gene=hinT
contig_1	Pyrodigal	CDS	1864295	1864717	.	+	0	ID=GCA000160335_01786;Name=HIT domain-containing protein;locus_tag=GCA000160335_01786;product=HIT domain-containing protein;gene=hinT;Parent=GCA000160335_01786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_000004981.1,SO:0001217,UniParc:UPI00000D76E8,UniRef:UniRef100_Q2G2F0,UniRef:UniRef50_A0A1D2KB85,UniRef:UniRef90_Q2G2F0
contig_1	Pyrodigal	gene	1864859	1865224	.	+	.	ID=GCA000160335_01787_gene;locus_tag=GCA000160335_01787;gene=gvpP
contig_1	Pyrodigal	CDS	1864859	1865224	.	+	0	ID=GCA000160335_01787;Name=YtxH domain-containing protein;locus_tag=GCA000160335_01787;product=YtxH domain-containing protein;gene=gvpP;Parent=GCA000160335_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4980,COG:R,RefSeq:WP_000648118.1,SO:0001217,UniParc:UPI000005431B,UniRef:UniRef100_Q2G2T0,UniRef:UniRef50_A0A1S2MI30,UniRef:UniRef90_Q2G2T0
contig_1	Pyrodigal	gene	1865332	1865451	.	-	.	ID=GCA000160335_01788_gene;locus_tag=GCA000160335_01788
contig_1	Pyrodigal	CDS	1865332	1865451	.	-	0	ID=GCA000160335_01788;Name=hypothetical protein;locus_tag=GCA000160335_01788;product=hypothetical protein;Parent=GCA000160335_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD742,UniRef:UniRef100_A0A7Z7QZN7,UniRef:UniRef50_A0A7Z7QZN7,UniRef:UniRef90_A0A7Z7QZN7
contig_1	Pyrodigal	gene	1865957	1866514	.	+	.	ID=GCA000160335_01789_gene;locus_tag=GCA000160335_01789
contig_1	Pyrodigal	CDS	1865957	1866514	.	+	0	ID=GCA000160335_01789;Name=DUF3267 domain-containing protein;locus_tag=GCA000160335_01789;product=DUF3267 domain-containing protein;Parent=GCA000160335_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477959.1,SO:0001217,UniParc:UPI000005431A,UniRef:UniRef100_Q2G2S9,UniRef:UniRef50_Q2G2S9,UniRef:UniRef90_Q2G2S9
contig_1	Pyrodigal	gene	1866719	1867681	.	+	.	ID=GCA000160335_01790_gene;locus_tag=GCA000160335_01790;gene=prsA
contig_1	Pyrodigal	CDS	1866719	1867681	.	+	0	ID=GCA000160335_01790;Name=Foldase protein PrsA;locus_tag=GCA000160335_01790;product=Foldase protein PrsA;Dbxref=GO:0005886,GO:0006457,GO:0140839,GO:0140840;gene=prsA;Parent=GCA000160335_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_000782130.1,SO:0001217,UniParc:UPI00003B17C6,UniRef:UniRef100_Q6GFL5,UniRef:UniRef50_Q2G2S6,UniRef:UniRef90_Q2G2S6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1867802	1868743	.	-	.	ID=GCA000160335_01791_gene;locus_tag=GCA000160335_01791;gene=yhaM
contig_1	Pyrodigal	CDS	1867802	1868743	.	-	0	ID=GCA000160335_01791;Name=3'-5' exoribonuclease YhaM;locus_tag=GCA000160335_01791;product=3'-5' exoribonuclease YhaM;gene=yhaM;Parent=GCA000160335_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3481,COG:J,KEGG:K03698,RefSeq:WP_001244175.1,SO:0001217,UniParc:UPI0000052249,UniRef:UniRef100_Q2G2T1,UniRef:UniRef50_Q9KDN6,UniRef:UniRef90_Q2G2T1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1868740	1871676	.	-	.	ID=GCA000160335_01792_gene;locus_tag=GCA000160335_01792;gene=yhaN
contig_1	Pyrodigal	CDS	1868740	1871676	.	-	0	ID=GCA000160335_01792;Name=putative protein YhaN AAA domain-containing protein;locus_tag=GCA000160335_01792;product=putative protein YhaN AAA domain-containing protein;gene=yhaN;Parent=GCA000160335_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4717,COG:S,RefSeq:WP_000584640.1,SO:0001217,UniParc:UPI0001B70231,UniRef:UniRef100_UPI0001B70231,UniRef:UniRef50_B9DMY3,UniRef:UniRef90_Q2G2S8
contig_1	Pyrodigal	gene	1871666	1872862	.	-	.	ID=GCA000160335_01793_gene;locus_tag=GCA000160335_01793;gene=sbcD
contig_1	Pyrodigal	CDS	1871666	1872862	.	-	0	ID=GCA000160335_01793;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000160335_01793;product=Calcineurin-like phosphoesterase domain-containing protein;gene=sbcD;Parent=GCA000160335_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000238227.1,SO:0001217,UniParc:UPI0000054317,UniRef:UniRef100_Q2G2S7,UniRef:UniRef50_Q2G2S7,UniRef:UniRef90_Q2G2S7
contig_1	Pyrodigal	gene	1873778	1874095	.	-	.	ID=GCA000160335_01794_gene;locus_tag=GCA000160335_01794;gene=ylbF
contig_1	Pyrodigal	CDS	1873778	1874095	.	-	0	ID=GCA000160335_01794;Name=YlbF/YmcA family competence regulator;locus_tag=GCA000160335_01794;product=YlbF/YmcA family competence regulator;gene=ylbF;Parent=GCA000160335_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,SO:0001217,UniRef:UniRef50_Q2FXA0,UniRef:UniRef90_Q2FXA0
contig_1	Pyrodigal	gene	1874164	1875288	.	-	.	ID=GCA000160335_01795_gene;locus_tag=GCA000160335_01795;gene=yheB
contig_1	Pyrodigal	CDS	1874164	1875288	.	-	0	ID=GCA000160335_01795;Name=UPF0754 membrane protein SAOUHSC_01978;locus_tag=GCA000160335_01795;product=UPF0754 membrane protein SAOUHSC_01978;Dbxref=GO:0005886;gene=yheB;Parent=GCA000160335_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4399,COG:S,RefSeq:WP_000992513.1,SO:0001217,UniParc:UPI00019F4C8D,UniRef:UniRef100_A0A7Z7QZQ2,UniRef:UniRef50_Q2FX99,UniRef:UniRef90_Q2FX99
contig_1	Pyrodigal	gene	1875467	1875931	.	-	.	ID=GCA000160335_01796_gene;locus_tag=GCA000160335_01796;gene=xRE
contig_1	Pyrodigal	CDS	1875467	1875931	.	-	0	ID=GCA000160335_01796;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_01796;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000160335_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_000375864.1,SO:0001217,UniParc:UPI00000D780E,UniRef:UniRef100_Q2FX98,UniRef:UniRef50_Q2FX98,UniRef:UniRef90_Q2FX98
contig_1	Pyrodigal	gene	1876289	1876912	.	-	.	ID=GCA000160335_01797_gene;locus_tag=GCA000160335_01797;gene=citB
contig_1	Pyrodigal	CDS	1876289	1876912	.	-	0	ID=GCA000160335_01797;Name=DNA-binding response regulator;locus_tag=GCA000160335_01797;product=DNA-binding response regulator;gene=citB;Parent=GCA000160335_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_001045133.1,SO:0001217,UniParc:UPI0000054A4B,UniRef:UniRef100_Q2FX97,UniRef:UniRef50_S2XG46,UniRef:UniRef90_A0A2W2R098
contig_1	Pyrodigal	gene	1876934	1878046	.	-	.	ID=GCA000160335_01798_gene;locus_tag=GCA000160335_01798;gene=comP
contig_1	Pyrodigal	CDS	1876934	1878046	.	-	0	ID=GCA000160335_01798;Name=histidine kinase;locus_tag=GCA000160335_01798;product=histidine kinase;gene=comP;Parent=GCA000160335_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,RefSeq:WP_000437967.1,SO:0001217,UniParc:UPI00003B17C9,UniRef:UniRef100_Q2FX96,UniRef:UniRef50_A0A380G577,UniRef:UniRef90_A0A077UMX2
contig_1	Pyrodigal	gene	1878209	1879030	.	+	.	ID=GCA000160335_01799_gene;locus_tag=GCA000160335_01799;gene=rluA
contig_1	Pyrodigal	CDS	1878209	1879030	.	+	0	ID=GCA000160335_01799;Name=Pseudouridine synthase;locus_tag=GCA000160335_01799;product=Pseudouridine synthase;gene=rluA;Parent=GCA000160335_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669380.1,SO:0001217,UniParc:UPI00003B17CA,UniRef:UniRef100_A0A7Z7W277,UniRef:UniRef50_A0A239YUZ3,UniRef:UniRef90_A0A7U7PYN7
contig_1	Pyrodigal	gene	1879486	1880871	.	-	.	ID=GCA000160335_01800_gene;locus_tag=GCA000160335_01800;gene=fumC
contig_1	Pyrodigal	CDS	1879486	1880871	.	-	0	ID=GCA000160335_01800;Name=class II fumarate hydratase;locus_tag=GCA000160335_01800;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA000160335_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_000116227.1,SO:0001217,UniParc:UPI00003B17CB,UniRef:UniRef100_Q6GFK5,UniRef:UniRef50_P64172,UniRef:UniRef90_P64172;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1881067	1881462	.	-	.	ID=GCA000160335_01801_gene;locus_tag=GCA000160335_01801
contig_1	Pyrodigal	CDS	1881067	1881462	.	-	0	ID=GCA000160335_01801;Name=DUF2975 domain-containing protein;locus_tag=GCA000160335_01801;product=DUF2975 domain-containing protein;Parent=GCA000160335_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000901019.1,SO:0001217,UniParc:UPI00003B17CC,UniRef:UniRef100_A0A0E1X6E6,UniRef:UniRef50_Q2FX93,UniRef:UniRef90_Q2FX93
contig_1	Pyrodigal	gene	1882063	1882215	.	-	.	ID=GCA000160335_01802_gene;locus_tag=GCA000160335_01802
contig_1	Pyrodigal	CDS	1882063	1882215	.	-	0	ID=GCA000160335_01802;Name=SAS053 family DNA gyrase inhibitor;locus_tag=GCA000160335_01802;product=SAS053 family DNA gyrase inhibitor;Dbxref=GO:0090729;Parent=GCA000160335_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000031108.1,SO:0001217,UniParc:UPI00000D7729,UniRef:UniRef100_Q2FX91,UniRef:UniRef50_Q2FX91,UniRef:UniRef90_Q2FX91
contig_1	Pyrodigal	gene	1882240	1882839	.	-	.	ID=GCA000160335_01803_gene;locus_tag=GCA000160335_01803;gene=nagB
contig_1	Pyrodigal	CDS	1882240	1882839	.	-	0	ID=GCA000160335_01803;Name=Glucosamine-6-phosphate isomerase;locus_tag=GCA000160335_01803;product=Glucosamine-6-phosphate isomerase;gene=nagB;Parent=GCA000160335_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_001251219.1,SO:0001217,UniParc:UPI00003B17CD,UniRef:UniRef100_A0A0E1X5Z6,UniRef:UniRef50_Q2FX90,UniRef:UniRef90_Q2FX90
contig_1	Pyrodigal	gene	1882998	1883468	.	-	.	ID=GCA000160335_01804_gene;locus_tag=GCA000160335_01804;gene=trmL
contig_1	Pyrodigal	CDS	1882998	1883468	.	-	0	ID=GCA000160335_01804;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA000160335_01804;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0006400,GO:0008175;gene=trmL;Parent=GCA000160335_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_000181394.1,SO:0001217,UniParc:UPI00000D777E,UniRef:UniRef100_A0A7Z7R078,UniRef:UniRef50_A2RKW7,UniRef:UniRef90_Q2FX89;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	1883473	1884600	.	-	.	ID=GCA000160335_01805_gene;locus_tag=GCA000160335_01805;gene=queG
contig_1	Pyrodigal	CDS	1883473	1884600	.	-	0	ID=GCA000160335_01805;Name=tRNA epoxyqueuosine(34) reductase QueG;locus_tag=GCA000160335_01805;product=tRNA epoxyqueuosine(34) reductase QueG;Dbxref=GO:0005737,GO:0006400,GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queG;Parent=GCA000160335_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1600,COG:J,KEGG:K18979,RefSeq:WP_000379980.1,SO:0001217,UniParc:UPI00000CACF6,UniRef:UniRef100_A0A7Z7QZI5,UniRef:UniRef50_P97030,UniRef:UniRef90_Q2FX88;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	1884751	1885479	.	-	.	ID=GCA000160335_01806_gene;locus_tag=GCA000160335_01806;gene=glnQ
contig_1	Pyrodigal	CDS	1884751	1885479	.	-	0	ID=GCA000160335_01806;Name=Glutamine transport ATP-binding protein glnQ;locus_tag=GCA000160335_01806;product=Glutamine transport ATP-binding protein glnQ;gene=glnQ;Parent=GCA000160335_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_001144055.1,SO:0001217,UniParc:UPI0000054AAF,UniRef:UniRef100_Q2FX87,UniRef:UniRef50_W0QFA6,UniRef:UniRef90_A0A2S6DLA3
contig_1	Pyrodigal	gene	1885466	1886923	.	-	.	ID=GCA000160335_01807_gene;locus_tag=GCA000160335_01807;gene=hisJ
contig_1	Pyrodigal	CDS	1885466	1886923	.	-	0	ID=GCA000160335_01807;Name=ABC transporter%2C permease protein%2C putative;locus_tag=GCA000160335_01807;product=ABC transporter%2C permease protein%2C putative;gene=hisJ;Parent=GCA000160335_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000649898.1,SO:0001217,UniParc:UPI00003B17CE,UniRef:UniRef100_A0A166N5L1,UniRef:UniRef50_A0A239YWZ0,UniRef:UniRef90_Q2FX86
contig_1	Pyrodigal	gene	1887182	1888243	.	-	.	ID=GCA000160335_01808_gene;locus_tag=GCA000160335_01808;gene=pfoR
contig_1	Pyrodigal	CDS	1887182	1888243	.	-	0	ID=GCA000160335_01808;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000160335_01808;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000160335_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000063551.1,SO:0001217,UniParc:UPI00003B17CF,UniRef:UniRef100_A0A7Z7R072,UniRef:UniRef50_B9DMY0,UniRef:UniRef90_A0A6B0D056
contig_1	tRNAscan-SE	gene	1888790	1888873	.	-	.	ID=GCA000160335_01809_gene;locus_tag=GCA000160335_01809;gene=trnL
contig_1	tRNAscan-SE	tRNA	1888790	1888873	.	-	.	ID=GCA000160335_01809;Name=tRNA-Leu(caa);locus_tag=GCA000160335_01809;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000160335_01809_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1888912	1888986	.	-	.	ID=GCA000160335_01810_gene;locus_tag=GCA000160335_01810;gene=trnG
contig_1	tRNAscan-SE	tRNA	1888912	1888986	.	-	.	ID=GCA000160335_01810;Name=tRNA-Gly(tcc);locus_tag=GCA000160335_01810;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000160335_01810_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1889000	1889074	.	-	.	ID=GCA000160335_01811_gene;locus_tag=GCA000160335_01811;gene=trnG;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	1889000	1889074	.	-	.	ID=GCA000160335_01811;Name=tRNA-Gly(tcc);locus_tag=GCA000160335_01811;product=tRNA-Gly(tcc);gene=trnG;pseudogene=unknown;anti_codon=tcc;amino_acid=Gly;Parent=GCA000160335_01811_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1889090	1889164	.	-	.	ID=GCA000160335_01812_gene;locus_tag=GCA000160335_01812;gene=trnG
contig_1	tRNAscan-SE	tRNA	1889090	1889164	.	-	.	ID=GCA000160335_01812;Name=tRNA-Gly(tcc);locus_tag=GCA000160335_01812;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000160335_01812_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1889172	1889245	.	-	.	ID=GCA000160335_01813_gene;locus_tag=GCA000160335_01813;gene=trnC
contig_1	tRNAscan-SE	tRNA	1889172	1889245	.	-	.	ID=GCA000160335_01813;Name=tRNA-Cys(gca);locus_tag=GCA000160335_01813;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000160335_01813_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	1889251	1889322	.	-	.	ID=GCA000160335_01814_gene;locus_tag=GCA000160335_01814;gene=trnQ
contig_1	tRNAscan-SE	tRNA	1889251	1889322	.	-	.	ID=GCA000160335_01814;Name=tRNA-Gln(ttg);locus_tag=GCA000160335_01814;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000160335_01814_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	1889334	1889406	.	-	.	ID=GCA000160335_01815_gene;locus_tag=GCA000160335_01815;gene=trnH
contig_1	tRNAscan-SE	tRNA	1889334	1889406	.	-	.	ID=GCA000160335_01815;Name=tRNA-His(gtg);locus_tag=GCA000160335_01815;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000160335_01815_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	1889409	1889482	.	-	.	ID=GCA000160335_01816_gene;locus_tag=GCA000160335_01816;gene=trnW
contig_1	tRNAscan-SE	tRNA	1889409	1889482	.	-	.	ID=GCA000160335_01816;Name=tRNA-Trp(cca);locus_tag=GCA000160335_01816;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000160335_01816_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	tRNAscan-SE	gene	1889498	1889578	.	-	.	ID=GCA000160335_01817_gene;locus_tag=GCA000160335_01817;gene=trnY
contig_1	tRNAscan-SE	tRNA	1889498	1889578	.	-	.	ID=GCA000160335_01817;Name=tRNA-Tyr(gta);locus_tag=GCA000160335_01817;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000160335_01817_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	1889584	1889659	.	-	.	ID=GCA000160335_01818_gene;locus_tag=GCA000160335_01818;gene=trnT
contig_1	tRNAscan-SE	tRNA	1889584	1889659	.	-	.	ID=GCA000160335_01818;Name=tRNA-Thr(tgt);locus_tag=GCA000160335_01818;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000160335_01818_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	1889667	1889739	.	-	.	ID=GCA000160335_01819_gene;locus_tag=GCA000160335_01819;gene=trnF
contig_1	tRNAscan-SE	tRNA	1889667	1889739	.	-	.	ID=GCA000160335_01819;Name=tRNA-Phe(gaa);locus_tag=GCA000160335_01819;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000160335_01819_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	1889758	1889833	.	-	.	ID=GCA000160335_01820_gene;locus_tag=GCA000160335_01820;gene=trnD
contig_1	tRNAscan-SE	tRNA	1889758	1889833	.	-	.	ID=GCA000160335_01820;Name=tRNA-Asp(gtc);locus_tag=GCA000160335_01820;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000160335_01820_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1889843	1889916	.	-	.	ID=GCA000160335_01821_gene;locus_tag=GCA000160335_01821;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1889843	1889916	.	-	.	ID=GCA000160335_01821;Name=tRNA-fMet(cat);locus_tag=GCA000160335_01821;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000160335_01821_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	1889931	1890023	.	-	.	ID=GCA000160335_01822_gene;locus_tag=GCA000160335_01822;gene=trnS
contig_1	tRNAscan-SE	tRNA	1889931	1890023	.	-	.	ID=GCA000160335_01822;Name=tRNA-Ser(tga);locus_tag=GCA000160335_01822;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000160335_01822_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1890062	1890137	.	-	.	ID=GCA000160335_01823_gene;locus_tag=GCA000160335_01823;gene=trnD
contig_1	tRNAscan-SE	tRNA	1890062	1890137	.	-	.	ID=GCA000160335_01823;Name=tRNA-Asp(gtc);locus_tag=GCA000160335_01823;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000160335_01823_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1890148	1890237	.	-	.	ID=GCA000160335_01824_gene;locus_tag=GCA000160335_01824;gene=trnS
contig_1	tRNAscan-SE	tRNA	1890148	1890237	.	-	.	ID=GCA000160335_01824;Name=tRNA-Ser(tga);locus_tag=GCA000160335_01824;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000160335_01824_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1890247	1890320	.	-	.	ID=GCA000160335_01825_gene;locus_tag=GCA000160335_01825;gene=trnI
contig_1	tRNAscan-SE	tRNA	1890247	1890320	.	-	.	ID=GCA000160335_01825;Name=tRNA-Ile2(cat);locus_tag=GCA000160335_01825;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000160335_01825_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	1890349	1890422	.	-	.	ID=GCA000160335_01826_gene;locus_tag=GCA000160335_01826;gene=trnM
contig_1	tRNAscan-SE	tRNA	1890349	1890422	.	-	.	ID=GCA000160335_01826;Name=tRNA-Met(cat);locus_tag=GCA000160335_01826;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000160335_01826_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	1890444	1890519	.	-	.	ID=GCA000160335_01827_gene;locus_tag=GCA000160335_01827;gene=trnA
contig_1	tRNAscan-SE	tRNA	1890444	1890519	.	-	.	ID=GCA000160335_01827;Name=tRNA-Ala(tgc);locus_tag=GCA000160335_01827;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000160335_01827_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	1890537	1890610	.	-	.	ID=GCA000160335_01828_gene;locus_tag=GCA000160335_01828;gene=trnP
contig_1	tRNAscan-SE	tRNA	1890537	1890610	.	-	.	ID=GCA000160335_01828;Name=tRNA-Pro(tgg);locus_tag=GCA000160335_01828;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000160335_01828_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	1890620	1890693	.	-	.	ID=GCA000160335_01829_gene;locus_tag=GCA000160335_01829;gene=trnR
contig_1	tRNAscan-SE	tRNA	1890620	1890693	.	-	.	ID=GCA000160335_01829;Name=tRNA-Arg(acg);locus_tag=GCA000160335_01829;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000160335_01829_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	1890712	1890800	.	-	.	ID=GCA000160335_01830_gene;locus_tag=GCA000160335_01830;gene=trnL
contig_1	tRNAscan-SE	tRNA	1890712	1890800	.	-	.	ID=GCA000160335_01830;Name=tRNA-Leu(taa);locus_tag=GCA000160335_01830;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000160335_01830_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1890811	1890885	.	-	.	ID=GCA000160335_01831_gene;locus_tag=GCA000160335_01831;gene=trnG
contig_1	tRNAscan-SE	tRNA	1890811	1890885	.	-	.	ID=GCA000160335_01831;Name=tRNA-Gly(gcc);locus_tag=GCA000160335_01831;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000160335_01831_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1890889	1890970	.	-	.	ID=GCA000160335_01832_gene;locus_tag=GCA000160335_01832;gene=trnL
contig_1	tRNAscan-SE	tRNA	1890889	1890970	.	-	.	ID=GCA000160335_01832;Name=tRNA-Leu(tag);locus_tag=GCA000160335_01832;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000160335_01832_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1890974	1891049	.	-	.	ID=GCA000160335_01833_gene;locus_tag=GCA000160335_01833;gene=trnK
contig_1	tRNAscan-SE	tRNA	1890974	1891049	.	-	.	ID=GCA000160335_01833;Name=tRNA-Lys(ttt);locus_tag=GCA000160335_01833;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000160335_01833_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	1891055	1891130	.	-	.	ID=GCA000160335_01834_gene;locus_tag=GCA000160335_01834;gene=trnT
contig_1	tRNAscan-SE	tRNA	1891055	1891130	.	-	.	ID=GCA000160335_01834;Name=tRNA-Thr(tgt);locus_tag=GCA000160335_01834;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000160335_01834_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	1891147	1891222	.	-	.	ID=GCA000160335_01835_gene;locus_tag=GCA000160335_01835;gene=trnV
contig_1	tRNAscan-SE	tRNA	1891147	1891222	.	-	.	ID=GCA000160335_01835;Name=tRNA-Val(tac);locus_tag=GCA000160335_01835;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000160335_01835_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Infernal	gene	1891234	1891348	.	-	.	ID=GCA000160335_01836_gene;locus_tag=GCA000160335_01836;gene=rrf
contig_1	Infernal	rRNA	1891234	1891348	1.1e-14	-	.	ID=GCA000160335_01836;Name=5S ribosomal RNA;locus_tag=GCA000160335_01836;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000160335_01836_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	1891421	1894343	.	-	.	ID=GCA000160335_01837_gene;locus_tag=GCA000160335_01837;gene=rrl
contig_1	Infernal	rRNA	1891421	1894343	1.4e-06	-	.	ID=GCA000160335_01837;Name=23S ribosomal RNA;locus_tag=GCA000160335_01837;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000160335_01837_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	1894557	1894632	.	-	.	ID=GCA000160335_01838_gene;locus_tag=GCA000160335_01838;gene=trnA
contig_1	tRNAscan-SE	tRNA	1894557	1894632	.	-	.	ID=GCA000160335_01838;Name=tRNA-Ala(tgc);locus_tag=GCA000160335_01838;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000160335_01838_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	1894651	1894727	.	-	.	ID=GCA000160335_01839_gene;locus_tag=GCA000160335_01839;gene=trnI
contig_1	tRNAscan-SE	tRNA	1894651	1894727	.	-	.	ID=GCA000160335_01839;Name=tRNA-Ile(gat);locus_tag=GCA000160335_01839;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000160335_01839_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	1894819	1896370	.	-	.	ID=GCA000160335_01840_gene;locus_tag=GCA000160335_01840;gene=rrs
contig_1	Infernal	rRNA	1894819	1896370	1.4e-49	-	.	ID=GCA000160335_01840;Name=16S ribosomal RNA;locus_tag=GCA000160335_01840;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000160335_01840_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	1897128	1897574	.	-	.	ID=GCA000160335_01841_gene;locus_tag=GCA000160335_01841;gene=perR
contig_1	Pyrodigal	CDS	1897128	1897574	.	-	0	ID=GCA000160335_01841;Name=peroxide-responsive transcriptional repressor PerR;locus_tag=GCA000160335_01841;product=peroxide-responsive transcriptional repressor PerR;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=perR;Parent=GCA000160335_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000110011,BlastRules:WP_002858684,BlastRules:WP_002987920,BlastRules:WP_003223285,COG:COG0735,COG:P,RefSeq:WP_000110011.1,SO:0001217,UniParc:UPI00000522DC,UniRef:UniRef100_Q2G282,UniRef:UniRef50_Q2G282,UniRef:UniRef90_Q2G282
contig_1	Pyrodigal	gene	1897671	1898630	.	-	.	ID=GCA000160335_01842_gene;locus_tag=GCA000160335_01842;gene=serA
contig_1	Pyrodigal	CDS	1897671	1898630	.	-	0	ID=GCA000160335_01842;Name=Hydroxyacid dehydrogenase;locus_tag=GCA000160335_01842;product=Hydroxyacid dehydrogenase;gene=serA;Parent=GCA000160335_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,SO:0001217,UniParc:UPI0002C95D81,UniRef:UniRef100_A0AAJ4YY14,UniRef:UniRef50_Q2G281,UniRef:UniRef90_Q2G281
contig_1	Pyrodigal	gene	1898627	1899082	.	-	.	ID=GCA000160335_01843_gene;locus_tag=GCA000160335_01843;gene=bcp
contig_1	Pyrodigal	CDS	1898627	1899082	.	-	0	ID=GCA000160335_01843;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000160335_01843;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0016209,GO:0016491;gene=bcp;Parent=GCA000160335_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,RefSeq:WP_000939529.1,SO:0001217,UniParc:UPI00019F4D7A,UniRef:UniRef100_A0AB37XS43,UniRef:UniRef50_Q5HN72,UniRef:UniRef90_A0A2K4AJG8;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1899163	1900452	.	+	.	ID=GCA000160335_01844_gene;locus_tag=GCA000160335_01844;gene=hemL2
contig_1	Pyrodigal	CDS	1899163	1900452	.	+	0	ID=GCA000160335_01844;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000160335_01844;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL2;Parent=GCA000160335_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_001011603.1,SO:0001217,UniParc:UPI00003B17D2,UniRef:UniRef100_Q6GFJ3,UniRef:UniRef50_Q2G283,UniRef:UniRef90_Q2G283;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	1900694	1901839	.	+	.	ID=GCA000160335_01845_gene;locus_tag=GCA000160335_01845;gene=ygaE
contig_1	Pyrodigal	CDS	1900694	1901839	.	+	0	ID=GCA000160335_01845;Name=Aromatic acid exporter family protein;locus_tag=GCA000160335_01845;product=Aromatic acid exporter family protein;gene=ygaE;Parent=GCA000160335_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,SO:0001217,UniParc:UPI00015FD73E,UniRef:UniRef100_Q2G2N1,UniRef:UniRef50_Q2G2N1,UniRef:UniRef90_Q2G2N1
contig_1	Pyrodigal	gene	1902030	1903766	.	-	.	ID=GCA000160335_01846_gene;locus_tag=GCA000160335_01846;gene=mdlB
contig_1	Pyrodigal	CDS	1902030	1903766	.	-	0	ID=GCA000160335_01846;Name=SAV1866 family putative multidrug efflux ABC transporter;locus_tag=GCA000160335_01846;product=SAV1866 family putative multidrug efflux ABC transporter;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016887;gene=mdlB;Parent=GCA000160335_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000597238,COG:COG1132,COG:V,RefSeq:WP_000597238.1,SO:0001217,UniParc:UPI00000544F9,UniRef:UniRef100_Q2G2M9,UniRef:UniRef50_P71082,UniRef:UniRef90_Q2G2M9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	1904057	1904599	.	-	.	ID=GCA000160335_01847_gene;locus_tag=GCA000160335_01847;gene=ygaC
contig_1	Pyrodigal	CDS	1904057	1904599	.	-	0	ID=GCA000160335_01847;Name=Nucleoside triphosphate/diphosphate phosphatase;locus_tag=GCA000160335_01847;product=Nucleoside triphosphate/diphosphate phosphatase;Dbxref=GO:0000287,GO:0017110,GO:0017111;gene=ygaC;Parent=GCA000160335_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3557,COG:S,KEGG:K07586,RefSeq:WP_000251252.1,SO:0001217,UniParc:UPI00003B17D3,UniRef:UniRef100_Q6GFJ0,UniRef:UniRef50_Q2G2M8,UniRef:UniRef90_Q2G2M8;ec_number=3.6.1.6
contig_1	Pyrodigal	gene	1904902	1905939	.	-	.	ID=GCA000160335_01848_gene;locus_tag=GCA000160335_01848;gene=mutY
contig_1	Pyrodigal	CDS	1904902	1905939	.	-	0	ID=GCA000160335_01848;Name=A/G-specific adenine glycosylase;locus_tag=GCA000160335_01848;product=A/G-specific adenine glycosylase;Dbxref=GO:0006284,GO:0019104;gene=mutY;Parent=GCA000160335_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,RefSeq:WP_000284755.1,SO:0001217,UniParc:UPI00003B17D4,UniRef:UniRef100_A0A7Z7W3B7,UniRef:UniRef50_A0A7U7JQ99,UniRef:UniRef90_A0A0U1MPG3;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	1906091	1907068	.	+	.	ID=GCA000160335_01849_gene;locus_tag=GCA000160335_01849;gene=ybcI
contig_1	Pyrodigal	CDS	1906091	1907068	.	+	0	ID=GCA000160335_01849;Name=Metal-dependent hydrolase;locus_tag=GCA000160335_01849;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000160335_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000379102.1,SO:0001217,UniParc:UPI00019F4D79,UniRef:UniRef100_UPI00019F4D79,UniRef:UniRef50_Q2G2V9,UniRef:UniRef90_Q2G2V9
contig_1	Pyrodigal	gene	1907329	1908165	.	-	.	ID=GCA000160335_01850_gene;locus_tag=GCA000160335_01850;gene=tagG
contig_1	Pyrodigal	CDS	1907329	1908165	.	-	0	ID=GCA000160335_01850;Name=Teichoic acid translocation permease protein TagG;locus_tag=GCA000160335_01850;product=Teichoic acid translocation permease protein TagG;gene=tagG;Parent=GCA000160335_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000886472.1,SO:0001217,UniParc:UPI00003B17D6,UniRef:UniRef100_A0A0E1XB16,UniRef:UniRef50_Q2G2V7,UniRef:UniRef90_Q2G2V7
contig_1	Pyrodigal	gene	1908174	1909691	.	-	.	ID=GCA000160335_01851_gene;locus_tag=GCA000160335_01851;gene=tagH
contig_1	Pyrodigal	CDS	1908174	1909691	.	-	0	ID=GCA000160335_01851;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_01851;product=ABC transporter domain-containing protein;gene=tagH;Parent=GCA000160335_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_000535849.1,SO:0001217,UniParc:UPI00003B17D7,UniRef:UniRef100_A0A7Z7QZK9,UniRef:UniRef50_Q2G2H3,UniRef:UniRef90_Q2G2H3
contig_1	Pyrodigal	gene	1909706	1910020	.	-	.	ID=GCA000160335_01852_gene;locus_tag=GCA000160335_01852
contig_1	Pyrodigal	CDS	1909706	1910020	.	-	0	ID=GCA000160335_01852;Name=Transcriptional regulator;locus_tag=GCA000160335_01852;product=Transcriptional regulator;Parent=GCA000160335_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435806.1,SO:0001217,UniParc:UPI00000D778E,UniRef:UniRef100_Q2G2H0,UniRef:UniRef50_G5JJ30,UniRef:UniRef90_G5JJ30
contig_1	Pyrodigal	gene	1909998	1910816	.	-	.	ID=GCA000160335_01853_gene;locus_tag=GCA000160335_01853;gene=recX
contig_1	Pyrodigal	CDS	1909998	1910816	.	-	0	ID=GCA000160335_01853;Name=recombination regulator RecX;locus_tag=GCA000160335_01853;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0006282;gene=recX;Parent=GCA000160335_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_001124422.1,SO:0001217,UniParc:UPI000013360F,UniRef:UniRef100_P66002,UniRef:UniRef50_Q2G2G9,UniRef:UniRef90_Q2G2G9
contig_1	Pyrodigal	gene	1911077	1911886	.	-	.	ID=GCA000160335_01854_gene;locus_tag=GCA000160335_01854;gene=sgtB
contig_1	Pyrodigal	CDS	1911077	1911886	.	-	0	ID=GCA000160335_01854;Name=monofunctional peptidoglycan glycosyltransferase SgtB;locus_tag=GCA000160335_01854;product=monofunctional peptidoglycan glycosyltransferase SgtB;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0030288,GO:0071555;gene=sgtB;Parent=GCA000160335_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000830377,COG:COG0744,COG:M,RefSeq:WP_000830380.1,SO:0001217,UniParc:UPI00000D7827,UniRef:UniRef100_Q93Q23,UniRef:UniRef50_Q93Q23,UniRef:UniRef90_Q93Q23;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1912227	1912742	.	-	.	ID=GCA000160335_01855_gene;locus_tag=GCA000160335_01855;gene=yajL
contig_1	Pyrodigal	CDS	1912227	1912742	.	-	0	ID=GCA000160335_01855;Name=putative protein SACOL1933;locus_tag=GCA000160335_01855;product=putative protein SACOL1933;gene=yajL;Parent=GCA000160335_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,RefSeq:WP_000163281.1,SO:0001217,UniParc:UPI00003B17D8,UniRef:UniRef100_Q6GFI2,UniRef:UniRef50_P0A0K3,UniRef:UniRef90_P0A0K3
contig_1	Pyrodigal	gene	1912872	1913033	.	-	.	ID=GCA000160335_01856_gene;locus_tag=GCA000160335_01856
contig_1	Pyrodigal	CDS	1912872	1913033	.	-	0	ID=GCA000160335_01856;Name=Cytosolic protein;locus_tag=GCA000160335_01856;product=Cytosolic protein;Parent=GCA000160335_01856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001005407.1,SO:0001217,UniParc:UPI00000544EF,UniRef:UniRef100_Q2G2H1,UniRef:UniRef50_A0A654BB04,UniRef:UniRef90_A0A654BB04
contig_1	Pyrodigal	gene	1913257	1914408	.	+	.	ID=GCA000160335_01857_gene;locus_tag=GCA000160335_01857;gene=yfkAB
contig_1	Pyrodigal	CDS	1913257	1914408	.	+	0	ID=GCA000160335_01857;Name=radical SAM/CxCxxxxC motif protein YfkAB;locus_tag=GCA000160335_01857;product=radical SAM/CxCxxxxC motif protein YfkAB;Dbxref=GO:0008152,GO:0051539,GO:1904047;gene=yfkAB;Parent=GCA000160335_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0535,COG:DH,RefSeq:WP_001089600.1,SO:0001217,UniParc:UPI00003B17D9,UniRef:UniRef100_A0A7Z7R0I5,UniRef:UniRef50_B9E7Z7,UniRef:UniRef90_A0AA40JNB2
contig_1	Pyrodigal	gene	1914668	1915198	.	-	.	ID=GCA000160335_01858_gene;locus_tag=GCA000160335_01858;gene=yciA
contig_1	Pyrodigal	CDS	1914668	1915198	.	-	0	ID=GCA000160335_01858;Name=HotDog ACOT-type domain-containing protein;locus_tag=GCA000160335_01858;product=HotDog ACOT-type domain-containing protein;gene=yciA;Parent=GCA000160335_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_000184383.1,SO:0001217,UniParc:UPI00000D7727,UniRef:UniRef100_Q2FX15,UniRef:UniRef50_A0A654BBY2,UniRef:UniRef90_Q2FX15
contig_1	Pyrodigal	gene	1915288	1916535	.	-	.	ID=GCA000160335_01859_gene;locus_tag=GCA000160335_01859;gene=ampS
contig_1	Pyrodigal	CDS	1915288	1916535	.	-	0	ID=GCA000160335_01859;Name=Aminopeptidase PepS;locus_tag=GCA000160335_01859;product=Aminopeptidase PepS;gene=ampS;Parent=GCA000160335_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2309,COG:E,SO:0001217,UniParc:UPI00003B17DA,UniRef:UniRef100_A0A7Z7W287,UniRef:UniRef50_A0A9N8IJS9,UniRef:UniRef90_A0A9N8IJS9
contig_1	Pyrodigal	gene	1916547	1916753	.	-	.	ID=GCA000160335_01860_gene;locus_tag=GCA000160335_01860;gene=yfkK
contig_1	Pyrodigal	CDS	1916547	1916753	.	-	0	ID=GCA000160335_01860;Name=UPF0435 protein SAHV_1865;locus_tag=GCA000160335_01860;product=UPF0435 protein SAHV_1865;gene=yfkK;Parent=GCA000160335_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4840,COG:S,SO:0001217,UniParc:UPI00000D766E,UniRef:UniRef100_Q7A4S2,UniRef:UniRef50_Q2FX13,UniRef:UniRef90_Q2FX13
contig_1	Pyrodigal	gene	1916894	1917358	.	+	.	ID=GCA000160335_01861_gene;locus_tag=GCA000160335_01861;gene=ptpA
contig_1	Pyrodigal	CDS	1916894	1917358	.	+	0	ID=GCA000160335_01861;Name=Low molecular weight protein-tyrosine-phosphatase PtpA;locus_tag=GCA000160335_01861;product=Low molecular weight protein-tyrosine-phosphatase PtpA;Dbxref=GO:0004726,GO:0005576,GO:0030946,GO:0140793;gene=ptpA;Parent=GCA000160335_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000228670.1,SO:0001217,UniParc:UPI00003B17DC,UniRef:UniRef100_Q6GFH6,UniRef:UniRef50_Q2FX12,UniRef:UniRef90_Q2FX12;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	1917365	1917640	.	+	.	ID=GCA000160335_01862_gene;locus_tag=GCA000160335_01862;gene=ytxH
contig_1	Pyrodigal	CDS	1917365	1917640	.	+	0	ID=GCA000160335_01862;Name=YtxH domain-containing protein;locus_tag=GCA000160335_01862;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000160335_01862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000428172.1,SO:0001217,UniParc:UPI000005449E,UniRef:UniRef100_Q2FX11,UniRef:UniRef50_A0A2K3ZIL3,UniRef:UniRef90_Q2FX11
contig_1	Pyrodigal	gene	1917918	1919135	.	+	.	ID=GCA000160335_01863_gene;locus_tag=GCA000160335_01863;gene=brkB
contig_1	Pyrodigal	CDS	1917918	1919135	.	+	0	ID=GCA000160335_01863;Name=Ribonuclease BN;locus_tag=GCA000160335_01863;product=Ribonuclease BN;gene=brkB;Parent=GCA000160335_01863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_000037081.1,SO:0001217,UniParc:UPI00019CD761,UniRef:UniRef100_A0A2S6DIN9,UniRef:UniRef50_A0A077UL04,UniRef:UniRef90_A0A077UL04
contig_1	Pyrodigal	gene	1919248	1919877	.	-	.	ID=GCA000160335_01864_gene;locus_tag=GCA000160335_01864;gene=vraR
contig_1	Pyrodigal	CDS	1919248	1919877	.	-	0	ID=GCA000160335_01864;Name=two-component system response regulator VraR;locus_tag=GCA000160335_01864;product=two-component system response regulator VraR;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=vraR;Parent=GCA000160335_01864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000153530,COG:COG2197,COG:TK,KEGG:K07694,RefSeq:WP_000153535.1,SO:0001217,UniParc:UPI000002E89F,UniRef:UniRef100_Q7A2Q1,UniRef:UniRef50_Q7A2Q1,UniRef:UniRef90_Q7A2Q1
contig_1	Pyrodigal	gene	1919867	1920910	.	-	.	ID=GCA000160335_01865_gene;locus_tag=GCA000160335_01865;gene=vraS
contig_1	Pyrodigal	CDS	1919867	1920910	.	-	0	ID=GCA000160335_01865;Name=Sensor protein VraS;locus_tag=GCA000160335_01865;product=Sensor protein VraS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0046983;gene=vraS;Parent=GCA000160335_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,KEGG:K07681,RefSeq:WP_001017131.1,SO:0001217,UniParc:UPI000005449B,UniRef:UniRef100_Q5HEN9,UniRef:UniRef50_Q7A2Q0,UniRef:UniRef90_Q7A2Q0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1920907	1921608	.	-	.	ID=GCA000160335_01866_gene;locus_tag=GCA000160335_01866;gene=liaF
contig_1	Pyrodigal	CDS	1920907	1921608	.	-	0	ID=GCA000160335_01866;Name=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;locus_tag=GCA000160335_01866;product=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;gene=liaF;Parent=GCA000160335_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4758,COG:T,KEGG:K11622,RefSeq:WP_000149064.1,SO:0001217,UniParc:UPI000005449A,UniRef:UniRef100_Q2FX07,UniRef:UniRef50_Q2FX07,UniRef:UniRef90_Q2FX07
contig_1	Pyrodigal	gene	1921623	1922009	.	-	.	ID=GCA000160335_01867_gene;locus_tag=GCA000160335_01867
contig_1	Pyrodigal	CDS	1921623	1922009	.	-	0	ID=GCA000160335_01867;Name=Staphylococcal protein;locus_tag=GCA000160335_01867;product=Staphylococcal protein;Parent=GCA000160335_01867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001110177.1,SO:0001217,UniParc:UPI0001B7024B,UniRef:UniRef100_UPI0001B7024B,UniRef:UniRef50_G5JJT9,UniRef:UniRef90_Q2FX06
contig_1	Pyrodigal	gene	1922226	1922984	.	-	.	ID=GCA000160335_01868_gene;locus_tag=GCA000160335_01868;gene=map
contig_1	Pyrodigal	CDS	1922226	1922984	.	-	0	ID=GCA000160335_01868;Name=type I methionyl aminopeptidase;locus_tag=GCA000160335_01868;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0006508,GO:0046872,GO:0070006;gene=map;Parent=GCA000160335_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,RefSeq:WP_000636142.1,SO:0001217,UniParc:UPI0000054498,UniRef:UniRef100_Q5HEN6,UniRef:UniRef50_Q8CRU9,UniRef:UniRef90_Q5HEN6;ec_number=3.4.11.18
contig_1	Infernal	gene	1923065	1923439	.	+	.	ID=GCA000160335_01869_gene;locus_tag=GCA000160335_01869;gene=S35
contig_1	Infernal	ncRNA	1923065	1923439	3.8e-15	+	.	ID=GCA000160335_01869;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01869;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01869_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1923569	1924555	.	+	.	ID=GCA000160335_01870_gene;locus_tag=GCA000160335_01870;gene=ygaE
contig_1	Pyrodigal	CDS	1923569	1924555	.	+	0	ID=GCA000160335_01870;Name=UPF0421 protein SACOL1947;locus_tag=GCA000160335_01870;product=UPF0421 protein SACOL1947;Dbxref=GO:0005886;gene=ygaE;Parent=GCA000160335_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_001014423.1,SO:0001217,UniParc:UPI00003B17DF,UniRef:UniRef100_Q6GFG8,UniRef:UniRef50_Q2FX03,UniRef:UniRef90_Q2FX03
contig_1	Pyrodigal	gene	1924744	1925157	.	-	.	ID=GCA000160335_01871_gene;locus_tag=GCA000160335_01871
contig_1	Pyrodigal	CDS	1924744	1925157	.	-	0	ID=GCA000160335_01871;Name=Cytosolic protein;locus_tag=GCA000160335_01871;product=Cytosolic protein;Parent=GCA000160335_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001643743.1,SO:0001217,UniParc:UPI00003B17E0,UniRef:UniRef100_A0A0E1X945,UniRef:UniRef50_Q2FX02,UniRef:UniRef90_Q2FX02
contig_1	Pyrodigal	gene	1925382	1926113	.	-	.	ID=GCA000160335_01872_gene;locus_tag=GCA000160335_01872;gene=gatD
contig_1	Pyrodigal	CDS	1925382	1926113	.	-	0	ID=GCA000160335_01872;Name=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;locus_tag=GCA000160335_01872;product=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;Dbxref=GO:0004359,GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0140282;gene=gatD;Parent=GCA000160335_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3442,COG:R,KEGG:K07009,RefSeq:WP_000544973.1,SO:0001217,UniParc:UPI00003B17E1,UniRef:UniRef100_A0A7Z7R0J4,UniRef:UniRef50_A0A0H2WZ38,UniRef:UniRef90_A0A0H2WZ38;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	1926115	1927428	.	-	.	ID=GCA000160335_01873_gene;locus_tag=GCA000160335_01873;gene=murT
contig_1	Pyrodigal	CDS	1926115	1927428	.	-	0	ID=GCA000160335_01873;Name=lipid II isoglutaminyl synthase subunit MurT;locus_tag=GCA000160335_01873;product=lipid II isoglutaminyl synthase subunit MurT;Dbxref=GO:0005524,GO:0008270,GO:0008360,GO:0009252,GO:0016881,GO:0071555,GO:0140282;gene=murT;Parent=GCA000160335_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001250336,COG:COG0769,COG:M,KEGG:K23393,RefSeq:WP_001250339.1,SO:0001217,UniParc:UPI00003B17E2,UniRef:UniRef100_A0A7Z7W238,UniRef:UniRef50_A0A0H3JUU7,UniRef:UniRef90_A0A0H3JUU7;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	1927720	1928220	.	+	.	ID=GCA000160335_01874_gene;locus_tag=GCA000160335_01874;gene=ftnA
contig_1	Pyrodigal	CDS	1927720	1928220	.	+	0	ID=GCA000160335_01874;Name=H-type ferritin FtnA;locus_tag=GCA000160335_01874;product=H-type ferritin FtnA;Dbxref=GO:0004322,GO:0005829,GO:0006826,GO:0006880,GO:0008198,GO:0008199;gene=ftnA;Parent=GCA000160335_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000949467,COG:COG1528,COG:P,RefSeq:WP_000949466.1,SO:0001217,UniParc:UPI00003B17E3,UniRef:UniRef100_Q6GFG4,UniRef:UniRef50_Q2FWZ8,UniRef:UniRef90_Q2FWZ8;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	1928611	1929165	.	+	.	ID=GCA000160335_01875_gene;locus_tag=GCA000160335_01875;gene=dnaQ
contig_1	Pyrodigal	CDS	1928611	1929165	.	+	0	ID=GCA000160335_01875;Name=DNA polymerase III polC-type;locus_tag=GCA000160335_01875;product=DNA polymerase III polC-type;gene=dnaQ;Parent=GCA000160335_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_000613738.1,SO:0001217,UniParc:UPI00000D771E,UniRef:UniRef100_A0A7Z7W2I3,UniRef:UniRef50_Q4L7K7,UniRef:UniRef90_A0A2I7Y430
contig_1	Pyrodigal	gene	1929232	1930302	.	-	.	ID=GCA000160335_01876_gene;locus_tag=GCA000160335_01876;gene=dinB
contig_1	Pyrodigal	CDS	1929232	1930302	.	-	0	ID=GCA000160335_01876;Name=DNA polymerase IV;locus_tag=GCA000160335_01876;product=DNA polymerase IV;Dbxref=GO:0000287,GO:0003684,GO:0003887,GO:0005829,GO:0006261,GO:0006281,GO:0009432,GO:0042276;gene=dinB;Parent=GCA000160335_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_000140179.1,SO:0001217,UniParc:UPI00003B17E4,UniRef:UniRef100_Q6GFG2,UniRef:UniRef50_Q49YT9,UniRef:UniRef90_P63991;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1930549	1931079	.	-	.	ID=GCA000160335_01877_gene;locus_tag=GCA000160335_01877
contig_1	Pyrodigal	CDS	1930549	1931079	.	-	0	ID=GCA000160335_01877;Name=Permease;locus_tag=GCA000160335_01877;product=Permease;Parent=GCA000160335_01877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000548777.1,SO:0001217,UniParc:UPI00003B17E5,UniRef:UniRef100_A0A7Z7W3D0,UniRef:UniRef50_Q2FWZ4,UniRef:UniRef90_Q2FWZ4
contig_1	Pyrodigal	gene	1931249	1932610	.	-	.	ID=GCA000160335_01878_gene;locus_tag=GCA000160335_01878;gene=rlmD
contig_1	Pyrodigal	CDS	1931249	1932610	.	-	0	ID=GCA000160335_01878;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA000160335_01878;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0008649,GO:0046872,GO:0051539,GO:0070041,GO:0070475;gene=rlmD;Parent=GCA000160335_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03215,RefSeq:WP_001147874.1,SO:0001217,UniParc:UPI00003B17E6,UniRef:UniRef100_Q6GFG0,UniRef:UniRef50_Q8CRU6,UniRef:UniRef90_Q7A4Q9;ec_number=2.1.1.190
contig_1	Pyrodigal	gene	1932691	1933638	.	-	.	ID=GCA000160335_01879_gene;locus_tag=GCA000160335_01879;gene=dagK
contig_1	Pyrodigal	CDS	1932691	1933638	.	-	0	ID=GCA000160335_01879;Name=diacylglycerol kinase;locus_tag=GCA000160335_01879;product=diacylglycerol kinase;Dbxref=GO:0003951,GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=dagK;Parent=GCA000160335_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_001231458.1,SO:0001217,UniParc:UPI00003B17E7,UniRef:UniRef100_Q6GFF9,UniRef:UniRef50_Q6GFF9,UniRef:UniRef90_Q6GFF9;ec_number=2.7.1.107
contig_1	Infernal	gene	1933807	1934059	.	+	.	ID=GCA000160335_01880_gene;locus_tag=GCA000160335_01880;gene=S35
contig_1	Infernal	ncRNA	1933807	1934059	1.6e-16	+	.	ID=GCA000160335_01880;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01880;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01880_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1934461	1935888	.	-	.	ID=GCA000160335_01881_gene;locus_tag=GCA000160335_01881;gene=gatB
contig_1	Pyrodigal	CDS	1934461	1935888	.	-	0	ID=GCA000160335_01881;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;locus_tag=GCA000160335_01881;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;Dbxref=GO:0005524,GO:0006412,GO:0016884,GO:0050566,GO:0050567,GO:0070681;gene=gatB;Parent=GCA000160335_01881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0064,COG:J,KEGG:K02434,RefSeq:WP_000545372.1,SO:0001217,UniParc:UPI0001B70092,UniRef:UniRef100_UPI0001B70092,UniRef:UniRef50_Q45486,UniRef:UniRef90_Q45486;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	1935901	1937358	.	-	.	ID=GCA000160335_01882_gene;locus_tag=GCA000160335_01882;gene=gatA
contig_1	Pyrodigal	CDS	1935901	1937358	.	-	0	ID=GCA000160335_01882;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;locus_tag=GCA000160335_01882;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0030956,GO:0050567;gene=gatA;Parent=GCA000160335_01882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0154,COG:J,KEGG:K02433,RefSeq:WP_000027924.1,SO:0001217,UniParc:UPI00003B17E8,UniRef:UniRef100_Q6GFF7,UniRef:UniRef50_O06491,UniRef:UniRef90_P63488;ec_number=6.3.5.7
contig_1	Pyrodigal	gene	1937360	1937662	.	-	.	ID=GCA000160335_01883_gene;locus_tag=GCA000160335_01883;gene=gatC
contig_1	Pyrodigal	CDS	1937360	1937662	.	-	0	ID=GCA000160335_01883;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;locus_tag=GCA000160335_01883;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0006450,GO:0030956,GO:0050566,GO:0050567,GO:0070681;gene=gatC;Parent=GCA000160335_01883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0721,COG:J,RefSeq:WP_000170162.1,SO:0001217,UniParc:UPI0000054485,UniRef:UniRef100_Q2FWY8,UniRef:UniRef50_Q2FWY8,UniRef:UniRef90_Q2FWY8;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	1938029	1939567	.	+	.	ID=GCA000160335_01884_gene;locus_tag=GCA000160335_01884;gene=putP
contig_1	Pyrodigal	CDS	1938029	1939567	.	+	0	ID=GCA000160335_01884;Name=sodium/proline symporter PutP;locus_tag=GCA000160335_01884;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0005886,GO:0006814,GO:0015193,GO:0015824,GO:0016020,GO:0031402;gene=putP;Parent=GCA000160335_01884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000957023.1,SO:0001217,UniParc:UPI00003B17E9,UniRef:UniRef100_Q6GFF5,UniRef:UniRef50_Q2FWY7,UniRef:UniRef90_Q2FWY7
contig_1	Pyrodigal	gene	1939656	1940855	.	-	.	ID=GCA000160335_01885_gene;locus_tag=GCA000160335_01885;gene=camS
contig_1	Pyrodigal	CDS	1939656	1940855	.	-	0	ID=GCA000160335_01885;Name=CamS family sex pheromone protein;locus_tag=GCA000160335_01885;product=CamS family sex pheromone protein;gene=camS;Parent=GCA000160335_01885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4851,COG:R,RefSeq:WP_000831695.1,SO:0001217,UniParc:UPI00019CD78A,UniRef:UniRef100_A0A7Z7QZT6,UniRef:UniRef50_Q2FWY6,UniRef:UniRef90_Q2FWY6
contig_1	Pyrodigal	gene	1940868	1942871	.	-	.	ID=GCA000160335_01886_gene;locus_tag=GCA000160335_01886;gene=ligA
contig_1	Pyrodigal	CDS	1940868	1942871	.	-	0	ID=GCA000160335_01886;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000160335_01886;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000160335_01886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_000774552.1,SO:0001217,UniParc:UPI00003B17EB,UniRef:UniRef100_Q6GFF3,UniRef:UniRef50_Q837V6,UniRef:UniRef90_Q99SY3;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	1942875	1945067	.	-	.	ID=GCA000160335_01887_gene;locus_tag=GCA000160335_01887;gene=pcrA
contig_1	Pyrodigal	CDS	1942875	1945067	.	-	0	ID=GCA000160335_01887;Name=DNA helicase PcrA;locus_tag=GCA000160335_01887;product=DNA helicase PcrA;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005737,GO:0005829,GO:0006268,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=pcrA;Parent=GCA000160335_01887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,RefSeq:WP_000992924.1,SO:0001217,UniParc:UPI00000CAA08,UniRef:UniRef100_P64318,UniRef:UniRef50_Q53727,UniRef:UniRef90_Q53727;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1945064	1945756	.	-	.	ID=GCA000160335_01888_gene;locus_tag=GCA000160335_01888;gene=pcrB
contig_1	Pyrodigal	CDS	1945064	1945756	.	-	0	ID=GCA000160335_01888;Name=heptaprenylglyceryl phosphate synthase;locus_tag=GCA000160335_01888;product=heptaprenylglyceryl phosphate synthase;Dbxref=GO:0000287,GO:0002094,GO:0046474;gene=pcrB;Parent=GCA000160335_01888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1646,COG:I,RefSeq:WP_000272063.1,SO:0001217,UniParc:UPI00003B17ED,UniRef:UniRef100_Q6GFF1,UniRef:UniRef50_Q53726,UniRef:UniRef90_Q53726;ec_number=2.5.1.n9
contig_1	Pyrodigal	gene	1945939	1946241	.	-	.	ID=GCA000160335_01889_gene;locus_tag=GCA000160335_01889;gene=yerC
contig_1	Pyrodigal	CDS	1945939	1946241	.	-	0	ID=GCA000160335_01889;Name=His repressor;locus_tag=GCA000160335_01889;product=His repressor;gene=yerC;Parent=GCA000160335_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4496,COG:R,RefSeq:WP_001165363.1,SO:0001217,UniParc:UPI000005447E,UniRef:UniRef100_Q2G1Y1,UniRef:UniRef50_Q7BVT7,UniRef:UniRef90_Q2G1Y1
contig_1	Pyrodigal	gene	1946350	1947645	.	-	.	ID=GCA000160335_01890_gene;locus_tag=GCA000160335_01890;gene=purB
contig_1	Pyrodigal	CDS	1946350	1947645	.	-	0	ID=GCA000160335_01890;Name=adenylosuccinate lyase;locus_tag=GCA000160335_01890;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0005829,GO:0006189,GO:0009152,GO:0044208,GO:0070626;gene=purB;Parent=GCA000160335_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_000572878.1,SO:0001217,UniParc:UPI00000D76FE,UniRef:UniRef100_Q2G2S0,UniRef:UniRef50_Q2G2S0,UniRef:UniRef90_Q2G2S0;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	1948496	1949662	.	+	.	ID=GCA000160335_01891_gene;locus_tag=GCA000160335_01891;gene=scpA
contig_1	Pyrodigal	CDS	1948496	1949662	.	+	0	ID=GCA000160335_01891;Name=cysteine protease staphopain A;locus_tag=GCA000160335_01891;product=cysteine protease staphopain A;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=scpA;Parent=GCA000160335_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000827761,RefSeq:WP_000827737.1,SO:0001217,UniParc:UPI0001B70094,UniRef:UniRef100_UPI0001B70094,UniRef:UniRef50_P81297,UniRef:UniRef90_P81297;ec_number=3.4.22.48
contig_1	Pyrodigal	gene	1949693	1950016	.	+	.	ID=GCA000160335_01892_gene;locus_tag=GCA000160335_01892
contig_1	Pyrodigal	CDS	1949693	1950016	.	+	0	ID=GCA000160335_01892;Name=Staphostatin A domain-containing protein;locus_tag=GCA000160335_01892;product=Staphostatin A domain-containing protein;Parent=GCA000160335_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000434531.1,SO:0001217,UniParc:UPI0001B70095,UniRef:UniRef100_UPI0001B70095,UniRef:UniRef50_Q2G2R7,UniRef:UniRef90_Q2G2R7
contig_1	Pyrodigal	gene	1950310	1950483	.	-	.	ID=GCA000160335_01893_gene;locus_tag=GCA000160335_01893
contig_1	Pyrodigal	CDS	1950310	1950483	.	-	0	ID=GCA000160335_01893;Name=NETI motif-containing protein;locus_tag=GCA000160335_01893;product=NETI motif-containing protein;Parent=GCA000160335_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669861.1,SO:0001217,UniParc:UPI00003B17F0,UniRef:UniRef100_A0A7Z7R0B4,UniRef:UniRef50_A0A0B5APK8,UniRef:UniRef90_Q2G2R6
contig_1	Pyrodigal	gene	1950464	1951066	.	-	.	ID=GCA000160335_01894_gene;locus_tag=GCA000160335_01894;gene=yebE
contig_1	Pyrodigal	CDS	1950464	1951066	.	-	0	ID=GCA000160335_01894;Name=UPF0316 protein SA1727;locus_tag=GCA000160335_01894;product=UPF0316 protein SA1727;Dbxref=GO:0005886;gene=yebE;Parent=GCA000160335_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4843,COG:S,RefSeq:WP_000011542.1,SO:0001217,UniParc:UPI00000D7723,UniRef:UniRef100_Q2G2R9,UniRef:UniRef50_Q2G2R9,UniRef:UniRef90_Q2G2R9
contig_1	Pyrodigal	gene	1951336	1952157	.	-	.	ID=GCA000160335_01895_gene;locus_tag=GCA000160335_01895;gene=nadE
contig_1	Pyrodigal	CDS	1951336	1952157	.	-	0	ID=GCA000160335_01895;Name=ammonia-dependent NAD(+) synthetase;locus_tag=GCA000160335_01895;product=ammonia-dependent NAD(+) synthetase;Dbxref=GO:0003952,GO:0004359,GO:0005524,GO:0005737,GO:0008795,GO:0009435,GO:0046872;gene=nadE;Parent=GCA000160335_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0171,COG:H,RefSeq:WP_000040861.1,SO:0001217,UniParc:UPI00003B17F1,UniRef:UniRef100_Q6GFE4,UniRef:UniRef50_Q88Z14,UniRef:UniRef90_P65506;ec_number=6.3.1.5
contig_1	Pyrodigal	gene	1952150	1953619	.	-	.	ID=GCA000160335_01896_gene;locus_tag=GCA000160335_01896;gene=pncB
contig_1	Pyrodigal	CDS	1952150	1953619	.	-	0	ID=GCA000160335_01896;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000160335_01896;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004516,GO:0009435;gene=pncB;Parent=GCA000160335_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1488,COG:H,KEGG:K00763,RefSeq:WP_000284434.1,SO:0001217,UniParc:UPI0001B70096,UniRef:UniRef100_A0A7Z7QZR3,UniRef:UniRef50_O32090,UniRef:UniRef90_A0A3A5LU92;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	1953803	1954879	.	+	.	ID=GCA000160335_01897_gene;locus_tag=GCA000160335_01897;gene=nos
contig_1	Pyrodigal	CDS	1953803	1954879	.	+	0	ID=GCA000160335_01897;Name=Nitric oxide synthase oxygenase;locus_tag=GCA000160335_01897;product=Nitric oxide synthase oxygenase;Dbxref=GO:0004517,GO:0006809,GO:0020037,GO:0046872;gene=nos;Parent=GCA000160335_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4362,COG:P,RefSeq:WP_000897633.1,SO:0001217,UniParc:UPI00003B17F3,UniRef:UniRef100_Q6GFE2,UniRef:UniRef50_Q6GFE2,UniRef:UniRef90_Q6GFE2;ec_number=1.14.14.47
contig_1	Pyrodigal	gene	1954899	1955693	.	+	.	ID=GCA000160335_01898_gene;locus_tag=GCA000160335_01898;gene=pheA2
contig_1	Pyrodigal	CDS	1954899	1955693	.	+	0	ID=GCA000160335_01898;Name=prephenate dehydratase;locus_tag=GCA000160335_01898;product=prephenate dehydratase;gene=pheA2;Parent=GCA000160335_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0077,COG:E,RefSeq:WP_001177832.1,SO:0001217,UniParc:UPI00003B17F4,UniRef:UniRef100_A0A7Z7R0B1,UniRef:UniRef50_A0A0E7Y8C1,UniRef:UniRef90_A0A0E7Y8C1
contig_1	Pyrodigal	gene	1955883	1957445	.	-	.	ID=GCA000160335_01899_gene;locus_tag=GCA000160335_01899;gene=sdcS
contig_1	Pyrodigal	CDS	1955883	1957445	.	-	0	ID=GCA000160335_01899;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000160335_01899;product=Sodium-dependent dicarboxylate transporter SdcS;Dbxref=GO:0005886,GO:0006814,GO:0015293;gene=sdcS;Parent=GCA000160335_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_000323171.1,SO:0001217,UniParc:UPI00003B17F5,UniRef:UniRef100_Q6GFE0,UniRef:UniRef50_Q2FWY4,UniRef:UniRef90_Q2FWY4
contig_1	Pyrodigal	gene	1957650	1958747	.	-	.	ID=GCA000160335_01900_gene;locus_tag=GCA000160335_01900
contig_1	Pyrodigal	CDS	1957650	1958747	.	-	0	ID=GCA000160335_01900;Name=Cell wall surface anchor family protein;locus_tag=GCA000160335_01900;product=Cell wall surface anchor family protein;Parent=GCA000160335_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000275719.1,SO:0001217,UniParc:UPI00003B17F6,UniRef:UniRef100_A0A7Z7R0Q0,UniRef:UniRef50_A0A2U0IGB7,UniRef:UniRef90_A0A2U0IGB7
contig_1	Pyrodigal	gene	1959120	1959680	.	+	.	ID=GCA000160335_01901_gene;locus_tag=GCA000160335_01901;gene=pncA
contig_1	Pyrodigal	CDS	1959120	1959680	.	+	0	ID=GCA000160335_01901;Name=Nicotinamidase;locus_tag=GCA000160335_01901;product=Nicotinamidase;gene=pncA;Parent=GCA000160335_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000149686.1,SO:0001217,UniParc:UPI0000054471,UniRef:UniRef100_Q2FWY2,UniRef:UniRef50_B9E842,UniRef:UniRef90_A0A077UMZ6
contig_1	Pyrodigal	gene	1959733	1960662	.	+	.	ID=GCA000160335_01902_gene;locus_tag=GCA000160335_01902;gene=ppaC
contig_1	Pyrodigal	CDS	1959733	1960662	.	+	0	ID=GCA000160335_01902;Name=manganese-dependent inorganic pyrophosphatase;locus_tag=GCA000160335_01902;product=manganese-dependent inorganic pyrophosphatase;Dbxref=GO:0004427,GO:0005737,GO:0030145;gene=ppaC;Parent=GCA000160335_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1227,KEGG:K15986,RefSeq:WP_001140871.1,SO:0001217,UniParc:UPI0000131FDA,UniRef:UniRef100_Q2FWY1,UniRef:UniRef50_P37487,UniRef:UniRef90_Q2FWY1;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	1961081	1962460	.	+	.	ID=GCA000160335_01903_gene;locus_tag=GCA000160335_01903;gene=aldH1
contig_1	Pyrodigal	CDS	1961081	1962460	.	+	0	ID=GCA000160335_01903;Name=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;locus_tag=GCA000160335_01903;product=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0005737,GO:0006081,GO:0016117,GO:0016620;gene=aldH1;Parent=GCA000160335_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001021224.1,SO:0001217,UniParc:UPI00003B17F8,UniRef:UniRef100_A0A7Z7W2A0,UniRef:UniRef50_Q2FWX9,UniRef:UniRef90_Q2FWX9;ec_number=1.2.1.-
contig_1	Pyrodigal	gene	1962580	1963608	.	-	.	ID=GCA000160335_01904_gene;locus_tag=GCA000160335_01904;gene=pgl
contig_1	Pyrodigal	CDS	1962580	1963608	.	-	0	ID=GCA000160335_01904;Name=putative protein SAOUHSC_02143;locus_tag=GCA000160335_01904;product=putative protein SAOUHSC_02143;Dbxref=GO:0005829,GO:0017057;gene=pgl;Parent=GCA000160335_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2706,COG:G,RefSeq:WP_000181322.1,SO:0001217,UniParc:UPI000005446D,UniRef:UniRef100_Q2FWX8,UniRef:UniRef50_Q2FWX8,UniRef:UniRef90_Q2FWX8
contig_1	Pyrodigal	gene	1963879	1964280	.	+	.	ID=GCA000160335_01905_gene;locus_tag=GCA000160335_01905
contig_1	Pyrodigal	CDS	1963879	1964280	.	+	0	ID=GCA000160335_01905;Name=YolD-like family protein;locus_tag=GCA000160335_01905;product=YolD-like family protein;Parent=GCA000160335_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205106.1,SO:0001217,UniParc:UPI000005446C,UniRef:UniRef100_Q2FWX7,UniRef:UniRef50_Q2FWX7,UniRef:UniRef90_Q2FWX7
contig_1	Pyrodigal	gene	1964337	1964510	.	-	.	ID=GCA000160335_01906_gene;locus_tag=GCA000160335_01906
contig_1	Pyrodigal	CDS	1964337	1964510	.	-	0	ID=GCA000160335_01906;Name=Phage protein;locus_tag=GCA000160335_01906;product=Phage protein;Parent=GCA000160335_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000267034.1,SO:0001217,UniParc:UPI000005446B,UniRef:UniRef100_Q2FWX6,UniRef:UniRef50_Q2FWX6,UniRef:UniRef90_Q2FWX6
contig_1	Pyrodigal	gene	1964889	1966001	.	+	.	ID=GCA000160335_01907_gene;locus_tag=GCA000160335_01907
contig_1	Pyrodigal	CDS	1964889	1966001	.	+	0	ID=GCA000160335_01907;Name=Peptidase C45 hydrolase domain-containing protein;locus_tag=GCA000160335_01907;product=Peptidase C45 hydrolase domain-containing protein;Parent=GCA000160335_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4927,COG:R,SO:0001217,UniParc:UPI00019CD7C7,UniRef:UniRef100_A0A7Z7QZT4,UniRef:UniRef50_A0A380GLM7,UniRef:UniRef90_Q2FWX5
contig_1	Pyrodigal	gene	1966058	1966900	.	-	.	ID=GCA000160335_01908_gene;locus_tag=GCA000160335_01908
contig_1	Pyrodigal	CDS	1966058	1966900	.	-	0	ID=GCA000160335_01908;Name=DUF4097 domain-containing protein;locus_tag=GCA000160335_01908;product=DUF4097 domain-containing protein;Parent=GCA000160335_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000713064.1,SO:0001217,UniParc:UPI00003B17FA,UniRef:UniRef100_A0A7Z7R0B9,UniRef:UniRef50_Q2FWX4,UniRef:UniRef90_Q2FWX4
contig_1	Pyrodigal	gene	1966897	1967454	.	-	.	ID=GCA000160335_01909_gene;locus_tag=GCA000160335_01909
contig_1	Pyrodigal	CDS	1966897	1967454	.	-	0	ID=GCA000160335_01909;Name=DUF1700 domain-containing protein;locus_tag=GCA000160335_01909;product=DUF1700 domain-containing protein;Parent=GCA000160335_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4709,COG:S,RefSeq:WP_001033968.1,SO:0001217,UniParc:UPI00003B17FB,UniRef:UniRef100_A0A7Z7QZN4,UniRef:UniRef50_Q2FWX3,UniRef:UniRef90_Q2FWX3
contig_1	Pyrodigal	gene	1967514	1968038	.	-	.	ID=GCA000160335_01910_gene;locus_tag=GCA000160335_01910
contig_1	Pyrodigal	CDS	1967514	1968038	.	-	0	ID=GCA000160335_01910;Name=Lipoprotein;locus_tag=GCA000160335_01910;product=Lipoprotein;Parent=GCA000160335_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000966289.1,SO:0001217,UniParc:UPI0001B700B5,UniRef:UniRef100_UPI0001B700B5,UniRef:UniRef50_G5JI25,UniRef:UniRef90_Q2FWX2
contig_1	Pyrodigal	gene	1968159	1968722	.	+	.	ID=GCA000160335_01911_gene;locus_tag=GCA000160335_01911
contig_1	Pyrodigal	CDS	1968159	1968722	.	+	0	ID=GCA000160335_01911;Name=Thioredoxin family protein;locus_tag=GCA000160335_01911;product=Thioredoxin family protein;Parent=GCA000160335_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182842.1,SO:0001217,UniParc:UPI00000D769F,UniRef:UniRef100_Q2FWX1,UniRef:UniRef50_Q2FWX1,UniRef:UniRef90_Q2FWX1
contig_1	Pyrodigal	gene	1968786	1969526	.	-	.	ID=GCA000160335_01912_gene;locus_tag=GCA000160335_01912;gene=pmtD
contig_1	Pyrodigal	CDS	1968786	1969526	.	-	0	ID=GCA000160335_01912;Name=phenol-soluble modulin export ABC transporter permease subunit PmtD;locus_tag=GCA000160335_01912;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;gene=pmtD;Parent=GCA000160335_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221651,BlastRules:WP_001830379,RefSeq:WP_001221650.1,SO:0001217,UniParc:UPI00003B17FC,UniRef:UniRef100_A0A162GVW4,UniRef:UniRef50_Q2FWX0,UniRef:UniRef90_Q2FWX0
contig_1	Pyrodigal	gene	1969526	1970398	.	-	.	ID=GCA000160335_01913_gene;locus_tag=GCA000160335_01913;gene=pmtC
contig_1	Pyrodigal	CDS	1969526	1970398	.	-	0	ID=GCA000160335_01913;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;locus_tag=GCA000160335_01913;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;gene=pmtC;Parent=GCA000160335_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000763048,BlastRules:WP_001830444,COG:COG1131,COG:JV,RefSeq:WP_000763048.1,SO:0001217,UniParc:UPI0000054464,UniRef:UniRef100_Q2FWW9,UniRef:UniRef50_S2XE79,UniRef:UniRef90_A0A390VQC9
contig_1	Pyrodigal	gene	1970395	1971075	.	-	.	ID=GCA000160335_01914_gene;locus_tag=GCA000160335_01914;gene=pmtB
contig_1	Pyrodigal	CDS	1970395	1971075	.	-	0	ID=GCA000160335_01914;Name=phenol-soluble modulin export ABC transporter permease subunit PmtB;locus_tag=GCA000160335_01914;product=phenol-soluble modulin export ABC transporter permease subunit PmtB;gene=pmtB;Parent=GCA000160335_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000645727,BlastRules:WP_002494112,RefSeq:WP_000645732.1,SO:0001217,UniParc:UPI00003B17FD,UniRef:UniRef100_A0A7Z7QZV5,UniRef:UniRef50_Q2FWW8,UniRef:UniRef90_Q2FWW8
contig_1	Pyrodigal	gene	1971076	1971972	.	-	.	ID=GCA000160335_01915_gene;locus_tag=GCA000160335_01915;gene=pmtA
contig_1	Pyrodigal	CDS	1971076	1971972	.	-	0	ID=GCA000160335_01915;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;locus_tag=GCA000160335_01915;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;gene=pmtA;Parent=GCA000160335_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000991302,BlastRules:WP_001830432,COG:COG1131,COG:JV,RefSeq:WP_000991315.1,SO:0001217,UniParc:UPI00003B17FE,UniRef:UniRef100_A0A2X2JZI7,UniRef:UniRef50_A0A380DUR2,UniRef:UniRef90_A0A380DUR2
contig_1	Pyrodigal	gene	1971969	1972349	.	-	.	ID=GCA000160335_01916_gene;locus_tag=GCA000160335_01916;gene=pmtR
contig_1	Pyrodigal	CDS	1971969	1972349	.	-	0	ID=GCA000160335_01916;Name=PSM export ABC transporter transcriptional regulator PmtR;locus_tag=GCA000160335_01916;product=PSM export ABC transporter transcriptional regulator PmtR;gene=pmtR;Parent=GCA000160335_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1725,COG:K,KEGG:K07979,RefSeq:WP_000691584.1,SO:0001217,UniParc:UPI00000D785D,UniRef:UniRef100_Q2FWW6,UniRef:UniRef50_Q2FWW6,UniRef:UniRef90_Q2FWW6
contig_1	Pyrodigal	gene	1972607	1972783	.	-	.	ID=GCA000160335_01917_gene;locus_tag=GCA000160335_01917
contig_1	Pyrodigal	CDS	1972607	1972783	.	-	0	ID=GCA000160335_01917;Name=Membrane protein;locus_tag=GCA000160335_01917;product=Membrane protein;Parent=GCA000160335_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000681966.1,SO:0001217,UniParc:UPI00003B1800,UniRef:UniRef100_A0A7Z7W251,UniRef:UniRef50_A0A151A0Y9,UniRef:UniRef90_Q2FWW5
contig_1	Pyrodigal	gene	1973323	1974609	.	+	.	ID=GCA000160335_01918_gene;locus_tag=GCA000160335_01918;gene=aspB
contig_1	Pyrodigal	CDS	1973323	1974609	.	+	0	ID=GCA000160335_01918;Name=Aminotransferase class I/classII large domain-containing protein;locus_tag=GCA000160335_01918;product=Aminotransferase class I/classII large domain-containing protein;gene=aspB;Parent=GCA000160335_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_001068528.1,SO:0001217,UniParc:UPI00003B1801,UniRef:UniRef100_A0AAJ4YY60,UniRef:UniRef50_A0A380FXV6,UniRef:UniRef90_Q2FWW3
contig_1	Pyrodigal	gene	1974880	1976949	.	-	.	ID=GCA000160335_01919_gene;locus_tag=GCA000160335_01919;gene=eap
contig_1	Pyrodigal	CDS	1974880	1976949	.	-	0	ID=GCA000160335_01919;Name=extracellular adherence protein Eap/Map;locus_tag=GCA000160335_01919;product=extracellular adherence protein Eap/Map;gene=eap;Parent=GCA000160335_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000669709,BlastRules:WP_001623710,KEGG:K14204,RefSeq:WP_000669728.1,SO:0001217,UniParc:UPI00019CD7F3,UniRef:UniRef100_A0A7Z7W2J9,UniRef:UniRef50_Q53599,UniRef:UniRef90_Q53599
contig_1	Pyrodigal	gene	1977350	1977550	.	+	.	ID=GCA000160335_01920_gene;locus_tag=GCA000160335_01920
contig_1	Pyrodigal	CDS	1977350	1977550	.	+	0	ID=GCA000160335_01920;Name=Beta-hemolysin;locus_tag=GCA000160335_01920;product=Beta-hemolysin;Parent=GCA000160335_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002CA44C6,UniRef:UniRef100_A0A2X2K6K8,UniRef:UniRef50_A0A7U6XWR1,UniRef:UniRef90_A0A7U6XWR1
contig_1	Bakta	gene	1978027	1978101	.	+	.	ID=GCA000160335_01921_gene;locus_tag=GCA000160335_01921;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1978027	1978101	.	+	0	ID=GCA000160335_01921;Name=Phage protein;locus_tag=GCA000160335_01921;product=Phage protein;Parent=GCA000160335_01921_gene;Note=SO:0001217,UniParc:UPI000865C40E,UniRef:UniRef100_A0A1C9ZYE6,UniRef:UniRef50_A0A0H5BLP8,UniRef:UniRef90_A0A0H5BLP8
contig_1	Pyrodigal	gene	1978725	1979075	.	-	.	ID=GCA000160335_01922_gene;locus_tag=GCA000160335_01922;gene=scn
contig_1	Pyrodigal	CDS	1978725	1979075	.	-	0	ID=GCA000160335_01922;Name=complement inhibitor SCIN-A;locus_tag=GCA000160335_01922;product=complement inhibitor SCIN-A;Dbxref=GO:0005576;gene=scn;Parent=GCA000160335_01922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702263,KEGG:K14199,NCBIProtein:ADL23798.1,RefSeq:WP_000702263.1,SO:0001217,UniParc:UPI00000D7752,UniRef:UniRef100_Q2FFF8,UniRef:UniRef50_Q2FWV6,UniRef:UniRef90_Q2FWV6
contig_1	Infernal	gene	1979234	1979375	.	-	.	ID=GCA000160335_01923_gene;locus_tag=GCA000160335_01923;gene=sprD
contig_1	Infernal	ncRNA	1979234	1979375	8.1e-26	-	.	ID=GCA000160335_01923;Name=Small pathogenicity island RNA D;locus_tag=GCA000160335_01923;gene=sprD;product=Small pathogenicity island RNA D;Dbxref=RFAM:RF01828;Parent=GCA000160335_01923_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01828
contig_1	Pyrodigal	gene	1979758	1980207	.	+	.	ID=GCA000160335_01924_gene;locus_tag=GCA000160335_01924;gene=chp
contig_1	Pyrodigal	CDS	1979758	1980207	.	+	0	ID=GCA000160335_01924;Name=chemotaxis-inhibiting protein CHIPS;locus_tag=GCA000160335_01924;product=chemotaxis-inhibiting protein CHIPS;Dbxref=GO:0005576;gene=chp;Parent=GCA000160335_01924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727649.1,SO:0001217,UniParc:UPI00001B580C,UniRef:UniRef100_Q2FFF7,UniRef:UniRef50_Q2FWV5,UniRef:UniRef90_Q2FWV5,VFDB:VFC0258,VFDB:VFG002422
contig_1	Pyrodigal	gene	1980302	1980598	.	-	.	ID=GCA000160335_01925_gene;locus_tag=GCA000160335_01925
contig_1	Pyrodigal	CDS	1980302	1980598	.	-	0	ID=GCA000160335_01925;Name=Peptidoglycan hydrolase%2C putative;locus_tag=GCA000160335_01925;product=Peptidoglycan hydrolase%2C putative;Parent=GCA000160335_01925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A345AR31,UniRef:UniRef90_Q2FWV4
contig_1	Infernal	gene	1980839	1980989	.	-	.	ID=GCA000160335_01926_gene;locus_tag=GCA000160335_01926;gene=sprX
contig_1	Infernal	ncRNA	1980839	1980989	1.6e-32	-	.	ID=GCA000160335_01926;Name=Small pathogenicity island RNA X;locus_tag=GCA000160335_01926;gene=sprX;product=Small pathogenicity island RNA X;Dbxref=RFAM:RF02672;Parent=GCA000160335_01926_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02672
contig_1	Pyrodigal	gene	1981286	1981777	.	-	.	ID=GCA000160335_01927_gene;locus_tag=GCA000160335_01927;gene=sak
contig_1	Pyrodigal	CDS	1981286	1981777	.	-	0	ID=GCA000160335_01927;Name=staphylokinase;locus_tag=GCA000160335_01927;product=staphylokinase;Dbxref=GO:0005576;gene=sak;Parent=GCA000160335_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000920038,NCBIProtein:CAA24957.1,RefSeq:WP_000919350.1,SO:0001217,UniParc:UPI00000B6E0F,UniRef:UniRef100_Q6GFB2,UniRef:UniRef50_P15240,UniRef:UniRef90_P15240
contig_1	Pyrodigal	gene	1981968	1982723	.	-	.	ID=GCA000160335_01928_gene;locus_tag=GCA000160335_01928
contig_1	Pyrodigal	CDS	1981968	1982723	.	-	0	ID=GCA000160335_01928;Name=Autolysin;locus_tag=GCA000160335_01928;product=Autolysin;Parent=GCA000160335_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000861038.1,SO:0001217,UniParc:UPI0000054453,UniRef:UniRef100_Q2FWV2,UniRef:UniRef50_A0A1W7ACD2,UniRef:UniRef90_A0A380E267
contig_1	Pyrodigal	gene	1982735	1982989	.	-	.	ID=GCA000160335_01929_gene;locus_tag=GCA000160335_01929
contig_1	Pyrodigal	CDS	1982735	1982989	.	-	0	ID=GCA000160335_01929;Name=phage holin;locus_tag=GCA000160335_01929;product=phage holin;Dbxref=GO:0140911;Parent=GCA000160335_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5546,COG:S,RefSeq:WP_000611512.1,SO:0001217,UniParc:UPI0000054452,UniRef:UniRef100_Q2FWV1,UniRef:UniRef50_A0A3D8ZD14,UniRef:UniRef90_A0A2X2MCQ2
contig_1	Infernal	gene	1983229	1983408	.	-	.	ID=GCA000160335_01930_gene;locus_tag=GCA000160335_01930;gene=rli28
contig_1	Infernal	ncRNA	1983229	1983408	9.1e-12	-	.	ID=GCA000160335_01930;Name=Listeria sRNA rli28;locus_tag=GCA000160335_01930;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000160335_01930_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	1983527	1983757	.	-	.	ID=GCA000160335_01931_gene;locus_tag=GCA000160335_01931
contig_1	Pyrodigal	CDS	1983527	1983757	.	-	0	ID=GCA000160335_01931;Name=DUF2951 domain-containing protein;locus_tag=GCA000160335_01931;product=DUF2951 domain-containing protein;Parent=GCA000160335_01931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7U0G7S2,UniRef:UniRef90_UPI00352AF0CC
contig_1	Pyrodigal	gene	1983881	1984168	.	-	.	ID=GCA000160335_01932_gene;locus_tag=GCA000160335_01932
contig_1	Pyrodigal	CDS	1983881	1984168	.	-	0	ID=GCA000160335_01932;Name=Phage protein;locus_tag=GCA000160335_01932;product=Phage protein;Parent=GCA000160335_01932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001040261.1,SO:0001217,UniParc:UPI000005444F,UniRef:UniRef100_Q2FWU7,UniRef:UniRef50_A0A0H3JMR5,UniRef:UniRef90_W5R962
contig_1	Pyrodigal	gene	1984215	1984367	.	-	.	ID=GCA000160335_01933_gene;locus_tag=GCA000160335_01933
contig_1	Pyrodigal	CDS	1984215	1984367	.	-	0	ID=GCA000160335_01933;Name=Phage protein;locus_tag=GCA000160335_01933;product=Phage protein;Parent=GCA000160335_01933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A345AQI6,UniRef:UniRef90_W5RAM1
contig_1	Pyrodigal	gene	1984357	1988142	.	-	.	ID=GCA000160335_01934_gene;locus_tag=GCA000160335_01934
contig_1	Pyrodigal	CDS	1984357	1988142	.	-	0	ID=GCA000160335_01934;Name=Peptidase S74 domain-containing protein;locus_tag=GCA000160335_01934;product=Peptidase S74 domain-containing protein;Parent=GCA000160335_01934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000582165.1,SO:0001217,UniParc:UPI0000696C87,UniRef:UniRef100_A0A9X9P4I3,UniRef:UniRef50_A0A2I6PDL0,UniRef:UniRef90_A0A9X9JUS9
contig_1	Pyrodigal	gene	1988158	1989642	.	-	.	ID=GCA000160335_01935_gene;locus_tag=GCA000160335_01935
contig_1	Pyrodigal	CDS	1988158	1989642	.	-	0	ID=GCA000160335_01935;Name=Phage tail protein;locus_tag=GCA000160335_01935;product=Phage tail protein;Parent=GCA000160335_01935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000567408.1,SO:0001217,UniParc:UPI00000CAF03,UniRef:UniRef100_A0A9X9JUP3,UniRef:UniRef50_C5I676,UniRef:UniRef90_C8CH31
contig_1	Pyrodigal	gene	1989639	1994168	.	-	.	ID=GCA000160335_01936_gene;locus_tag=GCA000160335_01936;gene=isaA
contig_1	Pyrodigal	CDS	1989639	1994168	.	-	0	ID=GCA000160335_01936;Name=putative transglycosylase IsaA;locus_tag=GCA000160335_01936;product=putative transglycosylase IsaA;gene=isaA;Parent=GCA000160335_01936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794405.1,SO:0001217,UniParc:UPI0001B700B8,UniRef:UniRef100_UPI0001B700B8,UniRef:UniRef50_A0A0U1MQ46,UniRef:UniRef90_A0A0U1MQ46
contig_1	Pyrodigal	gene	1994225	1994362	.	-	.	ID=GCA000160335_01937_gene;locus_tag=GCA000160335_01937
contig_1	Pyrodigal	CDS	1994225	1994362	.	-	0	ID=GCA000160335_01937;Name=Phage protein;locus_tag=GCA000160335_01937;product=Phage protein;Parent=GCA000160335_01937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH29,UniRef:UniRef90_A0A898CKY1
contig_1	Pyrodigal	gene	1994413	1994763	.	-	.	ID=GCA000160335_01938_gene;locus_tag=GCA000160335_01938;gene=gpG
contig_1	Pyrodigal	CDS	1994413	1994763	.	-	0	ID=GCA000160335_01938;Name=phage tail assembly chaperone G;locus_tag=GCA000160335_01938;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000160335_01938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3U503,UniRef:UniRef90_A0A0H3U503
contig_1	Pyrodigal	gene	1995079	1995723	.	-	.	ID=GCA000160335_01939_gene;locus_tag=GCA000160335_01939
contig_1	Pyrodigal	CDS	1995079	1995723	.	-	0	ID=GCA000160335_01939;Name=Phage tail protein;locus_tag=GCA000160335_01939;product=Phage tail protein;Parent=GCA000160335_01939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4L5J9,UniRef:UniRef90_A0A7U7JQL9
contig_1	Pyrodigal	gene	1995724	1996131	.	-	.	ID=GCA000160335_01940_gene;locus_tag=GCA000160335_01940
contig_1	Pyrodigal	CDS	1995724	1996131	.	-	0	ID=GCA000160335_01940;Name=Bacteriophage protein;locus_tag=GCA000160335_01940;product=Bacteriophage protein;Parent=GCA000160335_01940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4L5J8,UniRef:UniRef90_A0A2K4ANR9
contig_1	Pyrodigal	gene	1996128	1996532	.	-	.	ID=GCA000160335_01941_gene;locus_tag=GCA000160335_01941
contig_1	Pyrodigal	CDS	1996128	1996532	.	-	0	ID=GCA000160335_01941;Name=Phage protein;locus_tag=GCA000160335_01941;product=Phage protein;Parent=GCA000160335_01941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A9P3ZD13
contig_1	Pyrodigal	gene	1996529	1996891	.	-	.	ID=GCA000160335_01942_gene;locus_tag=GCA000160335_01942
contig_1	Pyrodigal	CDS	1996529	1996891	.	-	0	ID=GCA000160335_01942;Name=Phage protein;locus_tag=GCA000160335_01942;product=Phage protein;Parent=GCA000160335_01942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755150.1,SO:0001217,UniParc:UPI00000CAC93,UniRef:UniRef100_A0AA44A5F5,UniRef:UniRef50_Q4L5J6,UniRef:UniRef90_A0A7U7PW63
contig_1	Pyrodigal	gene	1996875	1997159	.	-	.	ID=GCA000160335_01943_gene;locus_tag=GCA000160335_01943
contig_1	Pyrodigal	CDS	1996875	1997159	.	-	0	ID=GCA000160335_01943;Name=Phage head-tail adapter protein;locus_tag=GCA000160335_01943;product=Phage head-tail adapter protein;Parent=GCA000160335_01943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000150936.1,SO:0001217,UniParc:UPI00000CACBA,UniRef:UniRef100_A0AA43V301,UniRef:UniRef50_A0A7U7PWE4,UniRef:UniRef90_A0AA43V301
contig_1	Pyrodigal	gene	1997149	1997433	.	-	.	ID=GCA000160335_01944_gene;locus_tag=GCA000160335_01944
contig_1	Pyrodigal	CDS	1997149	1997433	.	-	0	ID=GCA000160335_01944;Name=Arc-like repressor;locus_tag=GCA000160335_01944;product=Arc-like repressor;Parent=GCA000160335_01944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0H3U504,UniRef:UniRef90_UPI001E5A0411
contig_1	Pyrodigal	gene	1997453	1998598	.	-	.	ID=GCA000160335_01945_gene;locus_tag=GCA000160335_01945
contig_1	Pyrodigal	CDS	1997453	1998598	.	-	0	ID=GCA000160335_01945;Name=phage major capsid protein;locus_tag=GCA000160335_01945;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000160335_01945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154552.1,SO:0001217,UniParc:UPI0001B2F245,UniRef:UniRef100_C8CH21,UniRef:UniRef50_B9DJD8,UniRef:UniRef90_A0A5S9C4Q8
contig_1	Pyrodigal	gene	1998622	1999359	.	-	.	ID=GCA000160335_01946_gene;locus_tag=GCA000160335_01946;gene=clpP
contig_1	Pyrodigal	CDS	1998622	1999359	.	-	0	ID=GCA000160335_01946;Name=ATP-dependent Clp protease proteolytic subunit;locus_tag=GCA000160335_01946;product=ATP-dependent Clp protease proteolytic subunit;gene=clpP;Parent=GCA000160335_01946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_000642728.1,SO:0001217,UniParc:UPI00000CAB27,UniRef:UniRef100_A0A1X9GZV5,UniRef:UniRef50_A0A173M2D6,UniRef:UniRef90_A0A173M2D6;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	1999343	2000530	.	-	.	ID=GCA000160335_01947_gene;locus_tag=GCA000160335_01947
contig_1	Pyrodigal	CDS	1999343	2000530	.	-	0	ID=GCA000160335_01947;Name=phage portal protein;locus_tag=GCA000160335_01947;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000160335_01947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000025266.1,SO:0001217,UniParc:UPI00019CD4C0,UniRef:UniRef100_A0A0E1XB74,UniRef:UniRef50_A0A9X9JZ49,UniRef:UniRef90_A0A9X9JZ49
contig_1	Pyrodigal	gene	2000546	2002207	.	-	.	ID=GCA000160335_01948_gene;locus_tag=GCA000160335_01948;gene=ymfN
contig_1	Pyrodigal	CDS	2000546	2002207	.	-	0	ID=GCA000160335_01948;Name=Terminase large subunit;locus_tag=GCA000160335_01948;product=Terminase large subunit;gene=ymfN;Parent=GCA000160335_01948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4626,COG:X,RefSeq:WP_000625096.1,SO:0001217,UniParc:UPI00006E3BC7,UniRef:UniRef100_A0A075M4D3,UniRef:UniRef50_Q4L5J1,UniRef:UniRef90_A0A7U7JQH6
contig_1	Pyrodigal	gene	2002204	2002548	.	-	.	ID=GCA000160335_01949_gene;locus_tag=GCA000160335_01949
contig_1	Pyrodigal	CDS	2002204	2002548	.	-	0	ID=GCA000160335_01949;Name=Phage protein;locus_tag=GCA000160335_01949;product=Phage protein;Parent=GCA000160335_01949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAP7IF51,UniRef:UniRef90_UPI00090F1C5D
contig_1	Pyrodigal	gene	2002678	2002977	.	-	.	ID=GCA000160335_01950_gene;locus_tag=GCA000160335_01950;gene=mcrA
contig_1	Pyrodigal	CDS	2002678	2002977	.	-	0	ID=GCA000160335_01950;Name=Putative HNH nuclease YajD;locus_tag=GCA000160335_01950;product=Putative HNH nuclease YajD;gene=mcrA;Parent=GCA000160335_01950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1403,COG:V,RefSeq:WP_000988336.1,SO:0001217,UniParc:UPI00003B180E,UniRef:UniRef100_A0A075LZI9,UniRef:UniRef50_A0A2X2K0P5,UniRef:UniRef90_A0A6B0BKP5
contig_1	Pyrodigal	gene	2003209	2003625	.	-	.	ID=GCA000160335_01951_gene;locus_tag=GCA000160335_01951
contig_1	Pyrodigal	CDS	2003209	2003625	.	-	0	ID=GCA000160335_01951;Name=Transcriptional regulator;locus_tag=GCA000160335_01951;product=Transcriptional regulator;Parent=GCA000160335_01951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000590122.1,SO:0001217,UniParc:UPI00000CACDE,UniRef:UniRef100_A0AA43V3D4,UniRef:UniRef50_Q4L3V7,UniRef:UniRef90_A0A345AR05
contig_1	Pyrodigal	gene	2003653	2003853	.	-	.	ID=GCA000160335_01952_gene;locus_tag=GCA000160335_01952
contig_1	Pyrodigal	CDS	2003653	2003853	.	-	0	ID=GCA000160335_01952;Name=Phage protein;locus_tag=GCA000160335_01952;product=Phage protein;Parent=GCA000160335_01952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000265043.1,SO:0001217,UniParc:UPI000009B286,UniRef:UniRef100_W5R8L4,UniRef:UniRef50_A0A0H3JV18,UniRef:UniRef90_A0A0H3JV18
contig_1	Pyrodigal	gene	2003853	2004002	.	-	.	ID=GCA000160335_01953_gene;locus_tag=GCA000160335_01953;gene=rinB
contig_1	Pyrodigal	CDS	2003853	2004002	.	-	0	ID=GCA000160335_01953;Name=transcriptional activator RinB;locus_tag=GCA000160335_01953;product=transcriptional activator RinB;gene=rinB;Parent=GCA000160335_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A653ZBR0,UniRef:UniRef90_A0AA47KWC5
contig_1	Pyrodigal	gene	2003999	2004385	.	-	.	ID=GCA000160335_01954_gene;locus_tag=GCA000160335_01954
contig_1	Pyrodigal	CDS	2003999	2004385	.	-	0	ID=GCA000160335_01954;Name=Phage protein;locus_tag=GCA000160335_01954;product=Phage protein;Parent=GCA000160335_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH08,UniRef:UniRef90_A0A0E3T9I5
contig_1	Pyrodigal	gene	2004382	2004588	.	-	.	ID=GCA000160335_01955_gene;locus_tag=GCA000160335_01955
contig_1	Pyrodigal	CDS	2004382	2004588	.	-	0	ID=GCA000160335_01955;Name=DUF1381 domain-containing protein;locus_tag=GCA000160335_01955;product=DUF1381 domain-containing protein;Parent=GCA000160335_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_B2ZYX3,UniRef:UniRef90_A0A0N9BAZ6
contig_1	Pyrodigal	gene	2004625	2005161	.	-	.	ID=GCA000160335_01956_gene;locus_tag=GCA000160335_01956;gene=dut2
contig_1	Pyrodigal	CDS	2004625	2005161	.	-	0	ID=GCA000160335_01956;Name=dUTPase;locus_tag=GCA000160335_01956;product=dUTPase;gene=dut2;Parent=GCA000160335_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4508,COG:F,RefSeq:WP_000185695.1,SO:0001217,UniParc:UPI0001B70186,UniRef:UniRef100_UPI0001B70186,UniRef:UniRef50_A0A7U7JTE6,UniRef:UniRef90_Q9MBR0
contig_1	Pyrodigal	gene	2005154	2005324	.	-	.	ID=GCA000160335_01957_gene;locus_tag=GCA000160335_01957
contig_1	Pyrodigal	CDS	2005154	2005324	.	-	0	ID=GCA000160335_01957;Name=Phage protein;locus_tag=GCA000160335_01957;product=Phage protein;Parent=GCA000160335_01957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000714405.1,SO:0001217,UniParc:UPI0001C0BA0E,UniRef:UniRef100_UPI0001C0BA0E,UniRef:UniRef50_A0A0N9BAZ2,UniRef:UniRef90_A0A0H3U4U6
contig_1	Pyrodigal	gene	2005311	2005565	.	-	.	ID=GCA000160335_01958_gene;locus_tag=GCA000160335_01958
contig_1	Pyrodigal	CDS	2005311	2005565	.	-	0	ID=GCA000160335_01958;Name=DUF1024 domain-containing protein;locus_tag=GCA000160335_01958;product=DUF1024 domain-containing protein;Parent=GCA000160335_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065126.1,SO:0001217,UniParc:UPI0001B700D4,UniRef:UniRef100_UPI0001B700D4,UniRef:UniRef50_B2ZYX1,UniRef:UniRef90_B2ZYX1
contig_1	Pyrodigal	gene	2005558	2005989	.	-	.	ID=GCA000160335_01959_gene;locus_tag=GCA000160335_01959
contig_1	Pyrodigal	CDS	2005558	2005989	.	-	0	ID=GCA000160335_01959;Name=Acetyltransferase;locus_tag=GCA000160335_01959;product=Acetyltransferase;Parent=GCA000160335_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193482.1,SO:0001217,UniParc:UPI00031673F6,UniRef:UniRef100_UPI00031673F6,UniRef:UniRef50_C8CH13,UniRef:UniRef90_A0A345AQ95
contig_1	Pyrodigal	gene	2005986	2006369	.	-	.	ID=GCA000160335_01960_gene;locus_tag=GCA000160335_01960;gene=yopX
contig_1	Pyrodigal	CDS	2005986	2006369	.	-	0	ID=GCA000160335_01960;Name=YopX family protein;locus_tag=GCA000160335_01960;product=YopX family protein;gene=yopX;Parent=GCA000160335_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000979207.1,SO:0001217,UniParc:UPI0001B700D6,UniRef:UniRef100_UPI0001B700D6,UniRef:UniRef50_UPI000F43BC2B,UniRef:UniRef90_UPI0013A68D2F
contig_1	Pyrodigal	gene	2006369	2006560	.	-	.	ID=GCA000160335_01961_gene;locus_tag=GCA000160335_01961
contig_1	Pyrodigal	CDS	2006369	2006560	.	-	0	ID=GCA000160335_01961;Name=Phage protein;locus_tag=GCA000160335_01961;product=Phage protein;Parent=GCA000160335_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000983948.1,SO:0001217,UniParc:UPI0001B700D7,UniRef:UniRef100_UPI00021E180D,UniRef:UniRef50_A0A0U2A067,UniRef:UniRef90_A0A345AQ94
contig_1	Pyrodigal	gene	2006557	2006982	.	-	.	ID=GCA000160335_01962_gene;locus_tag=GCA000160335_01962
contig_1	Pyrodigal	CDS	2006557	2006982	.	-	0	ID=GCA000160335_01962;Name=Phage PVL protein;locus_tag=GCA000160335_01962;product=Phage PVL protein;Parent=GCA000160335_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000694060.1,SO:0001217,UniParc:UPI0004AC452A,UniRef:UniRef100_UPI0004AC452A,UniRef:UniRef50_A0A059T621,UniRef:UniRef90_UPI0006846C46
contig_1	Pyrodigal	gene	2006997	2007245	.	-	.	ID=GCA000160335_01963_gene;locus_tag=GCA000160335_01963
contig_1	Pyrodigal	CDS	2006997	2007245	.	-	0	ID=GCA000160335_01963;Name=Phage family protein;locus_tag=GCA000160335_01963;product=Phage family protein;Parent=GCA000160335_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001126837.1,SO:0001217,UniParc:UPI0001B700D9,UniRef:UniRef100_UPI0001B700D9,UniRef:UniRef50_M9NTB1,UniRef:UniRef90_M9NTB1
contig_1	Pyrodigal	gene	2007246	2007617	.	-	.	ID=GCA000160335_01964_gene;locus_tag=GCA000160335_01964
contig_1	Pyrodigal	CDS	2007246	2007617	.	-	0	ID=GCA000160335_01964;Name=Phage protein;locus_tag=GCA000160335_01964;product=Phage protein;Parent=GCA000160335_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001140295.1,SO:0001217,UniParc:UPI0001B700DA,UniRef:UniRef100_UPI0001B700DA,UniRef:UniRef50_A0A0E3T8L4,UniRef:UniRef90_A7TWN6
contig_1	Pyrodigal	gene	2007618	2007803	.	-	.	ID=GCA000160335_01965_gene;locus_tag=GCA000160335_01965
contig_1	Pyrodigal	CDS	2007618	2007803	.	-	0	ID=GCA000160335_01965;Name=DUF3113 domain-containing protein;locus_tag=GCA000160335_01965;product=DUF3113 domain-containing protein;Parent=GCA000160335_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001187241.1,SO:0001217,UniParc:UPI0001B700DB,UniRef:UniRef100_UPI0001B700DB,UniRef:UniRef50_B2ZYW2,UniRef:UniRef90_A0A2I6PCS4
contig_1	Pyrodigal	gene	2007808	2008212	.	-	.	ID=GCA000160335_01966_gene;locus_tag=GCA000160335_01966
contig_1	Pyrodigal	CDS	2007808	2008212	.	-	0	ID=GCA000160335_01966;Name=DUF1064 domain-containing protein;locus_tag=GCA000160335_01966;product=DUF1064 domain-containing protein;Parent=GCA000160335_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000049776.1,SO:0001217,UniParc:UPI0001B700DC,UniRef:UniRef100_UPI0001B700DC,UniRef:UniRef50_Q9G020,UniRef:UniRef90_A7TWN5
contig_1	Pyrodigal	gene	2008222	2008443	.	-	.	ID=GCA000160335_01967_gene;locus_tag=GCA000160335_01967
contig_1	Pyrodigal	CDS	2008222	2008443	.	-	0	ID=GCA000160335_01967;Name=Phi ETA-like protein;locus_tag=GCA000160335_01967;product=Phi ETA-like protein;Parent=GCA000160335_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001123683.1,SO:0001217,UniParc:UPI0001B70188,UniRef:UniRef100_UPI0001B70188,UniRef:UniRef50_Q4L3U2,UniRef:UniRef90_A0A0N9BAW8
contig_1	Pyrodigal	gene	2008457	2008618	.	-	.	ID=GCA000160335_01968_gene;locus_tag=GCA000160335_01968
contig_1	Pyrodigal	CDS	2008457	2008618	.	-	0	ID=GCA000160335_01968;Name=Phage protein;locus_tag=GCA000160335_01968;product=Phage protein;Parent=GCA000160335_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000237154.1,SO:0001217,UniParc:UPI0000505856,UniRef:UniRef100_A0A8E4VSG4,UniRef:UniRef50_M9NRM1,UniRef:UniRef90_M9NRM1
contig_1	Pyrodigal	gene	2008612	2009385	.	-	.	ID=GCA000160335_01969_gene;locus_tag=GCA000160335_01969
contig_1	Pyrodigal	CDS	2008612	2009385	.	-	0	ID=GCA000160335_01969;Name=IstB-like ATP-binding domain-containing protein;locus_tag=GCA000160335_01969;product=IstB-like ATP-binding domain-containing protein;Parent=GCA000160335_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000803046.1,SO:0001217,UniParc:UPI0001B700DE,UniRef:UniRef100_A0A0C6E410,UniRef:UniRef50_Q4L3U0,UniRef:UniRef90_Q9MBR8
contig_1	Pyrodigal	gene	2009395	2010198	.	-	.	ID=GCA000160335_01970_gene;locus_tag=GCA000160335_01970
contig_1	Pyrodigal	CDS	2009395	2010198	.	-	0	ID=GCA000160335_01970;Name=EF-hand domain-containing protein;locus_tag=GCA000160335_01970;product=EF-hand domain-containing protein;Parent=GCA000160335_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000504988.1,SO:0001217,UniParc:UPI0000505818,UniRef:UniRef100_A0A7X3JVL3,UniRef:UniRef50_A0A8E4QKL7,UniRef:UniRef90_A0A8E4QKL7
contig_1	Pyrodigal	gene	2010742	2010951	.	-	.	ID=GCA000160335_01971_gene;locus_tag=GCA000160335_01971
contig_1	Pyrodigal	CDS	2010742	2010951	.	-	0	ID=GCA000160335_01971;Name=hypothetical protein;locus_tag=GCA000160335_01971;product=hypothetical protein;Parent=GCA000160335_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794413.1,SO:0001217,UniParc:UPI0001B70293,UniRef:UniRef100_UPI0001B70293,UniRef:UniRef50_UPI0002E2B926,UniRef:UniRef90_UPI0001B70293
contig_1	Pyrodigal	gene	2010951	2011616	.	-	.	ID=GCA000160335_01972_gene;locus_tag=GCA000160335_01972
contig_1	Pyrodigal	CDS	2010951	2011616	.	-	0	ID=GCA000160335_01972;Name=Phage protein;locus_tag=GCA000160335_01972;product=Phage protein;Parent=GCA000160335_01972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001199441.1,SO:0001217,UniParc:UPI0001B702E5,UniRef:UniRef100_A0AAW4YB84,UniRef:UniRef50_Q4L3T6,UniRef:UniRef90_M9NUK7
contig_1	Pyrodigal	gene	2011629	2012183	.	-	.	ID=GCA000160335_01973_gene;locus_tag=GCA000160335_01973
contig_1	Pyrodigal	CDS	2011629	2012183	.	-	0	ID=GCA000160335_01973;Name=Single-strand DNA-binding protein%2C putative;locus_tag=GCA000160335_01973;product=Single-strand DNA-binding protein%2C putative;Parent=GCA000160335_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000704713.1,SO:0001217,UniParc:UPI00000544B6,UniRef:UniRef100_Q2FX34,UniRef:UniRef50_A0A6N3ATM7,UniRef:UniRef90_Q2FX34
contig_1	Pyrodigal	gene	2012213	2012992	.	-	.	ID=GCA000160335_01974_gene;locus_tag=GCA000160335_01974
contig_1	Pyrodigal	CDS	2012213	2012992	.	-	0	ID=GCA000160335_01974;Name=ATP-binding protein;locus_tag=GCA000160335_01974;product=ATP-binding protein;Parent=GCA000160335_01974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000139741.1,SO:0001217,UniParc:UPI0001B3B27A,UniRef:UniRef100_A0A8G2M9D1,UniRef:UniRef50_A0A8G2M9D1,UniRef:UniRef90_A0A8G2M9D1
contig_1	Pyrodigal	gene	2012985	2013206	.	-	.	ID=GCA000160335_01975_gene;locus_tag=GCA000160335_01975
contig_1	Pyrodigal	CDS	2012985	2013206	.	-	0	ID=GCA000160335_01975;Name=DUF2483 domain-containing protein;locus_tag=GCA000160335_01975;product=DUF2483 domain-containing protein;Parent=GCA000160335_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_B2ZYV2,UniRef:UniRef90_B2ZYV2
contig_1	Pyrodigal	gene	2013216	2013476	.	-	.	ID=GCA000160335_01976_gene;locus_tag=GCA000160335_01976
contig_1	Pyrodigal	CDS	2013216	2013476	.	-	0	ID=GCA000160335_01976;Name=DUF1108 domain-containing protein;locus_tag=GCA000160335_01976;product=DUF1108 domain-containing protein;Parent=GCA000160335_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794414.1,SO:0001217,UniParc:UPI0001B700E1,UniRef:UniRef100_UPI0001B700E1,UniRef:UniRef90_Q4ZAS7
contig_1	Pyrodigal	gene	2013481	2013798	.	-	.	ID=GCA000160335_01977_gene;locus_tag=GCA000160335_01977
contig_1	Pyrodigal	CDS	2013481	2013798	.	-	0	ID=GCA000160335_01977;Name=Phage protein;locus_tag=GCA000160335_01977;product=Phage protein;Parent=GCA000160335_01977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829613.1,SO:0001217,UniParc:UPI0000505B3C,UniRef:UniRef100_A0A410T4B0,UniRef:UniRef50_M9NUK8,UniRef:UniRef90_A0A410T4B0
contig_1	Pyrodigal	gene	2013887	2014048	.	-	.	ID=GCA000160335_01978_gene;locus_tag=GCA000160335_01978
contig_1	Pyrodigal	CDS	2013887	2014048	.	-	0	ID=GCA000160335_01978;Name=Phage protein;locus_tag=GCA000160335_01978;product=Phage protein;Parent=GCA000160335_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000066016.1,SO:0001217,UniParc:UPI0001B700E3,UniRef:UniRef100_UPI0001B700E3,UniRef:UniRef50_B2ZYU9,UniRef:UniRef90_R4IH12
contig_1	Pyrodigal	gene	2014045	2014365	.	-	.	ID=GCA000160335_01979_gene;locus_tag=GCA000160335_01979
contig_1	Pyrodigal	CDS	2014045	2014365	.	-	0	ID=GCA000160335_01979;Name=DUF771 domain-containing protein;locus_tag=GCA000160335_01979;product=DUF771 domain-containing protein;Parent=GCA000160335_01979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4707,COG:X,RefSeq:WP_001120198.1,SO:0001217,UniParc:UPI0001B70295,UniRef:UniRef100_UPI0001B70295,UniRef:UniRef50_Q4L5G9,UniRef:UniRef90_A0A075LYF5
contig_1	Pyrodigal	gene	2014424	2015056	.	+	.	ID=GCA000160335_01980_gene;locus_tag=GCA000160335_01980
contig_1	Pyrodigal	CDS	2014424	2015056	.	+	0	ID=GCA000160335_01980;Name=Phage protein;locus_tag=GCA000160335_01980;product=Phage protein;Parent=GCA000160335_01980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000275058.1,SO:0001217,UniParc:UPI000069AB15,UniRef:UniRef100_A0A1W6JPT7,UniRef:UniRef50_A0A2K4ANQ9,UniRef:UniRef90_W5R935
contig_1	Pyrodigal	gene	2015071	2015211	.	-	.	ID=GCA000160335_01981_gene;locus_tag=GCA000160335_01981
contig_1	Pyrodigal	CDS	2015071	2015211	.	-	0	ID=GCA000160335_01981;Name=Phage protein;locus_tag=GCA000160335_01981;product=Phage protein;Parent=GCA000160335_01981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000939496.1,SO:0001217,UniParc:UPI0000054419,UniRef:UniRef100_A0AA43V2U0,UniRef:UniRef50_Q4L3S9,UniRef:UniRef90_A0AA43V2U0
contig_1	Pyrodigal	gene	2015242	2015439	.	-	.	ID=GCA000160335_01982_gene;locus_tag=GCA000160335_01982
contig_1	Pyrodigal	CDS	2015242	2015439	.	-	0	ID=GCA000160335_01982;Name=Phage protein;locus_tag=GCA000160335_01982;product=Phage protein;Parent=GCA000160335_01982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001148861.1,SO:0001217,UniParc:UPI00000D7699,UniRef:UniRef100_A0A9X9P268,UniRef:UniRef50_O80075,UniRef:UniRef90_O80075
contig_1	Pyrodigal	gene	2015455	2016207	.	-	.	ID=GCA000160335_01983_gene;locus_tag=GCA000160335_01983;gene=kilAC
contig_1	Pyrodigal	CDS	2015455	2016207	.	-	0	ID=GCA000160335_01983;Name=Anti-repressor;locus_tag=GCA000160335_01983;product=Anti-repressor;gene=kilAC;Parent=GCA000160335_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3645,COG:X,KEGG:K07741,RefSeq:WP_001148647.1,SO:0001217,UniParc:UPI0001B700E4,UniRef:UniRef100_UPI0001B700E4,UniRef:UniRef50_A0A0C6ELE4,UniRef:UniRef90_C5I631
contig_1	Pyrodigal	gene	2016237	2016458	.	-	.	ID=GCA000160335_01984_gene;locus_tag=GCA000160335_01984
contig_1	Pyrodigal	CDS	2016237	2016458	.	-	0	ID=GCA000160335_01984;Name=Helix-turn-helix domain;locus_tag=GCA000160335_01984;product=Helix-turn-helix domain;Parent=GCA000160335_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A4D5ZMA2,UniRef:UniRef90_A0A6B5AKF7
contig_1	Pyrodigal	gene	2016613	2017245	.	+	.	ID=GCA000160335_01985_gene;locus_tag=GCA000160335_01985
contig_1	Pyrodigal	CDS	2016613	2017245	.	+	0	ID=GCA000160335_01985;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA000160335_01985;product=Helix-turn-helix domain-containing protein;Parent=GCA000160335_01985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01356,RefSeq:WP_000901359.1,SO:0001217,UniParc:UPI0001B700E6,UniRef:UniRef100_UPI0001B700E6,UniRef:UniRef50_A0A380D6V0,UniRef:UniRef90_A0A6A8FWB9;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	2017426	2018124	.	+	.	ID=GCA000160335_01986_gene;locus_tag=GCA000160335_01986
contig_1	Pyrodigal	CDS	2017426	2018124	.	+	0	ID=GCA000160335_01986;Name=Potassium channel family protein;locus_tag=GCA000160335_01986;product=Potassium channel family protein;Parent=GCA000160335_01986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000837517.1,SO:0001217,UniParc:UPI0001B700E7,UniRef:UniRef100_A0A6B5GHG3,UniRef:UniRef50_A0A6B5GHG3,UniRef:UniRef90_A0A6B5GHG3
contig_1	Pyrodigal	gene	2018280	2018462	.	+	.	ID=GCA000160335_01987_gene;locus_tag=GCA000160335_01987
contig_1	Pyrodigal	CDS	2018280	2018462	.	+	0	ID=GCA000160335_01987;Name=Phage protein;locus_tag=GCA000160335_01987;product=Phage protein;Parent=GCA000160335_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000694772.1,SO:0001217,UniParc:UPI00000CAAA0,UniRef:UniRef100_A0A2I6PDF8,UniRef:UniRef50_A4ZF71,UniRef:UniRef90_M9NSW6
contig_1	Pyrodigal	gene	2018595	2020256	.	+	.	ID=GCA000160335_01988_gene;locus_tag=GCA000160335_01988
contig_1	Pyrodigal	CDS	2018595	2020256	.	+	0	ID=GCA000160335_01988;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA000160335_01988;product=site-specific DNA-methyltransferase (adenine-specific);Parent=GCA000160335_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06223,SO:0001217,UniRef:UniRef50_A0A2H4JAL2,UniRef:UniRef90_A0A517JDS5;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	2020312	2021337	.	+	.	ID=GCA000160335_01989_gene;locus_tag=GCA000160335_01989
contig_1	Pyrodigal	CDS	2020312	2021337	.	+	0	ID=GCA000160335_01989;Name=hypothetical protein;locus_tag=GCA000160335_01989;product=hypothetical protein;Parent=GCA000160335_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF22022.2,PFAM:PF14659.12,PFAM:PF13102.12
contig_1	Pyrodigal	gene	2021405	2022229	.	+	.	ID=GCA000160335_01990_gene;locus_tag=GCA000160335_01990;gene=sph
contig_1	Pyrodigal	CDS	2021405	2022229	.	+	0	ID=GCA000160335_01990;Name=sphingomyelin phosphodiesterase;locus_tag=GCA000160335_01990;product=sphingomyelin phosphodiesterase;Dbxref=GO:0004767;gene=sph;Parent=GCA000160335_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B700EA,UniRef:UniRef100_A0A0Q0XKP0,UniRef:UniRef50_Q2FWP1,UniRef:UniRef90_A0A0Q0XKP0;ec_number=3.1.4.12
contig_1	Pyrodigal	gene	2022486	2023505	.	-	.	ID=GCA000160335_01991_gene;locus_tag=GCA000160335_01991
contig_1	Pyrodigal	CDS	2022486	2023505	.	-	0	ID=GCA000160335_01991;Name=putative leukocidin-like protein 1;locus_tag=GCA000160335_01991;product=putative leukocidin-like protein 1;Dbxref=GO:0005576,GO:0051715;Parent=GCA000160335_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595617.1,SO:0001217,UniParc:UPI00003B1822,UniRef:UniRef100_Q6GF50,UniRef:UniRef50_Q2FWP0,UniRef:UniRef90_Q6GF50
contig_1	Pyrodigal	gene	2023527	2024582	.	-	.	ID=GCA000160335_01992_gene;locus_tag=GCA000160335_01992
contig_1	Pyrodigal	CDS	2023527	2024582	.	-	0	ID=GCA000160335_01992;Name=putative leukocidin-like protein 2;locus_tag=GCA000160335_01992;product=putative leukocidin-like protein 2;Dbxref=GO:0005576,GO:0051715;Parent=GCA000160335_01992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791398.1,SO:0001217,UniParc:UPI00019F4D0D,UniRef:UniRef100_A0A7Z7QZU5,UniRef:UniRef50_Q2FWN9,UniRef:UniRef90_Q6GF49
contig_1	Pyrodigal	gene	2025014	2026237	.	+	.	ID=GCA000160335_01993_gene;locus_tag=GCA000160335_01993;gene=dapE
contig_1	Pyrodigal	CDS	2025014	2026237	.	+	0	ID=GCA000160335_01993;Name=putative succinyl-diaminopimelate desuccinylase;locus_tag=GCA000160335_01993;product=putative succinyl-diaminopimelate desuccinylase;Dbxref=GO:0009014,GO:0009089,GO:0019877,GO:0046872;gene=dapE;Parent=GCA000160335_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_000206618.1,SO:0001217,UniParc:UPI00003B1824,UniRef:UniRef100_Q6GF48,UniRef:UniRef50_Q5HKI1,UniRef:UniRef90_Q99SN6;ec_number=3.5.1.18
contig_1	Infernal	gene	2026420	2026650	.	+	.	ID=GCA000160335_01994_gene;locus_tag=GCA000160335_01994;gene=S35
contig_1	Infernal	ncRNA	2026420	2026650	4.6e-12	+	.	ID=GCA000160335_01994;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_01994;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_01994_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2026676	2027983	.	+	.	ID=GCA000160335_01995_gene;locus_tag=GCA000160335_01995
contig_1	Pyrodigal	CDS	2026676	2027983	.	+	0	ID=GCA000160335_01995;Name=Na+-transporting ATP synthase;locus_tag=GCA000160335_01995;product=Na+-transporting ATP synthase;Parent=GCA000160335_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001045062.1,SO:0001217,UniParc:UPI0001B700ED,UniRef:UniRef100_UPI0001B700ED,UniRef:UniRef50_Q4L3A1,UniRef:UniRef90_A0A8G2I1H9
contig_1	Pyrodigal	gene	2028561	2028902	.	-	.	ID=GCA000160335_01996_gene;locus_tag=GCA000160335_01996
contig_1	Pyrodigal	CDS	2028561	2028902	.	-	0	ID=GCA000160335_01996;Name=Phage protein;locus_tag=GCA000160335_01996;product=Phage protein;Parent=GCA000160335_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573771.1,SO:0001217,UniParc:UPI00003B1826,UniRef:UniRef100_A0A7Z7QZP9,UniRef:UniRef50_A0A7Z7QZP9,UniRef:UniRef90_A0A7Z7QZP9
contig_1	Pyrodigal	gene	2028892	2029188	.	-	.	ID=GCA000160335_01997_gene;locus_tag=GCA000160335_01997
contig_1	Pyrodigal	CDS	2028892	2029188	.	-	0	ID=GCA000160335_01997;Name=Phage protein;locus_tag=GCA000160335_01997;product=Phage protein;Parent=GCA000160335_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025173856.1,SO:0001217,UniParc:UPI00046C483C,UniRef:UniRef100_UPI00046C483C,UniRef:UniRef50_A0A7Z7QZS4,UniRef:UniRef90_A0A7Z7QZS4
contig_1	Pyrodigal	gene	2029185	2029364	.	-	.	ID=GCA000160335_01998_gene;locus_tag=GCA000160335_01998
contig_1	Pyrodigal	CDS	2029185	2029364	.	-	0	ID=GCA000160335_01998;Name=Phage protein;locus_tag=GCA000160335_01998;product=Phage protein;Parent=GCA000160335_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000201397.1,SO:0001217,UniParc:UPI00005FE686,UniRef:UniRef100_A0A7U7ID75,UniRef:UniRef50_A0A7U7ID75,UniRef:UniRef90_A0A7U7ID75
contig_1	Pyrodigal	gene	2029906	2031522	.	-	.	ID=GCA000160335_01999_gene;locus_tag=GCA000160335_01999;gene=groL
contig_1	Pyrodigal	CDS	2029906	2031522	.	-	0	ID=GCA000160335_01999;Name=chaperonin GroEL;locus_tag=GCA000160335_01999;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA000160335_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_000240651.1,SO:0001217,UniParc:UPI00003B1829,UniRef:UniRef100_Q6GF43,UniRef:UniRef50_Q9KKF0,UniRef:UniRef90_Q08854;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	2031598	2031882	.	-	.	ID=GCA000160335_02000_gene;locus_tag=GCA000160335_02000;gene=groES
contig_1	Pyrodigal	CDS	2031598	2031882	.	-	0	ID=GCA000160335_02000;Name=co-chaperone GroES;locus_tag=GCA000160335_02000;product=co-chaperone GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000160335_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_000917289.1,SO:0001217,UniParc:UPI0000000ED6,UniRef:UniRef100_Q2FWN3,UniRef:UniRef50_Q2FWN3,UniRef:UniRef90_Q2FWN3
contig_1	Pyrodigal	gene	2032057	2032800	.	+	.	ID=GCA000160335_02001_gene;locus_tag=GCA000160335_02001;gene=mroQ
contig_1	Pyrodigal	CDS	2032057	2032800	.	+	0	ID=GCA000160335_02001;Name=intramembrane glutamic endopeptidase MroQ;locus_tag=GCA000160335_02001;product=intramembrane glutamic endopeptidase MroQ;Dbxref=GO:0004222,GO:0016020,GO:0071586;gene=mroQ;Parent=GCA000160335_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1266,COG:O,RefSeq:WP_000197638.1,SO:0001217,UniParc:UPI00003B182A,UniRef:UniRef100_A0A7Z7R0F0,UniRef:UniRef50_A0A0H2XEK8,UniRef:UniRef90_A0A0H2XEK8;ec_number=3.4.26.-
contig_1	Pyrodigal	gene	2032825	2034102	.	-	.	ID=GCA000160335_02002_gene;locus_tag=GCA000160335_02002
contig_1	Pyrodigal	CDS	2032825	2034102	.	-	0	ID=GCA000160335_02002;Name=Membrane anchored protein;locus_tag=GCA000160335_02002;product=Membrane anchored protein;Parent=GCA000160335_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120332.1,SO:0001217,UniParc:UPI0001B70114,UniRef:UniRef100_UPI0001B70114,UniRef:UniRef50_A0A0U1MQP7,UniRef:UniRef90_A0A0U1MQP7
contig_1	Pyrodigal	gene	2034299	2034925	.	+	.	ID=GCA000160335_02003_gene;locus_tag=GCA000160335_02003;gene=fMR2
contig_1	Pyrodigal	CDS	2034299	2034925	.	+	0	ID=GCA000160335_02003;Name=Nitroreductase domain-containing protein;locus_tag=GCA000160335_02003;product=Nitroreductase domain-containing protein;gene=fMR2;Parent=GCA000160335_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3560,COG:R,KEGG:K07078,RefSeq:WP_000522388.1,SO:0001217,UniParc:UPI00003B182C,UniRef:UniRef100_A0A0E1XIZ3,UniRef:UniRef50_Q2FWN0,UniRef:UniRef90_Q2FWN0
contig_1	Bakta	gene	2035095	2035163	.	-	.	ID=GCA000160335_02004_gene;locus_tag=GCA000160335_02004;inference=ab initio prediction:Bakta;gene=nifR
contig_1	Bakta	CDS	2035095	2035163	.	-	0	ID=GCA000160335_02004;Name=Nitrogen fixation protein NifR;locus_tag=GCA000160335_02004;product=Nitrogen fixation protein NifR;gene=nifR;Parent=GCA000160335_02004_gene;Note=SO:0001217,UniParc:UPI0004F35BC7,UniRef:UniRef100_A0A7Z1SA60,UniRef:UniRef50_A0A7Z1SA60,UniRef:UniRef90_A0A7Z1SA60
contig_1	Pyrodigal	gene	2035286	2036071	.	+	.	ID=GCA000160335_02005_gene;locus_tag=GCA000160335_02005;gene=yafV
contig_1	Pyrodigal	CDS	2035286	2036071	.	+	0	ID=GCA000160335_02005;Name=Hydrolase in agr operon;locus_tag=GCA000160335_02005;product=Hydrolase in agr operon;Dbxref=GO:0016787;gene=yafV;Parent=GCA000160335_02005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0388,COG:V,RefSeq:WP_000867948.1,SO:0001217,UniParc:UPI00003B182D,UniRef:UniRef100_A0A7Z7QZV1,UniRef:UniRef50_P0DP65,UniRef:UniRef90_P0DP65;ec_number=3.5.-.-
contig_1	Infernal	gene	2036325	2036839	.	-	.	ID=GCA000160335_02006_gene;locus_tag=GCA000160335_02006;gene=RNAIII
contig_1	Infernal	ncRNA	2036325	2036839	3.9e-56	-	.	ID=GCA000160335_02006;Name=RNAIII;locus_tag=GCA000160335_02006;product=RNAIII;Dbxref=RFAM:RF00503;Parent=GCA000160335_02006_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00503
contig_1	Pyrodigal	gene	2036675	2036809	.	-	.	ID=GCA000160335_02007_gene;locus_tag=GCA000160335_02007;gene=hld
contig_1	Pyrodigal	CDS	2036675	2036809	.	-	0	ID=GCA000160335_02007;Name=delta-hemolysin;locus_tag=GCA000160335_02007;product=delta-hemolysin;Dbxref=GO:0005576,GO:0016020,GO:0019836,GO:0020002,GO:0090729;gene=hld;Parent=GCA000160335_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11039,NCBIProtein:AGU62139.1,RefSeq:WP_001549197.1,SO:0001217,UniParc:UPI0000000A3A,UniRef:UniRef100_Q2FWM8,UniRef:UniRef50_Q2FWM8,UniRef:UniRef90_Q2FWM8,VFDB:VFC0235,VFDB:VFG001292
contig_1	Pyrodigal	gene	2036991	2037608	.	+	.	ID=GCA000160335_02008_gene;locus_tag=GCA000160335_02008;gene=agrB
contig_1	Pyrodigal	CDS	2036991	2037608	.	+	0	ID=GCA000160335_02008;Name=Accessory gene regulator protein B;locus_tag=GCA000160335_02008;product=Accessory gene regulator protein B;Dbxref=GO:0005886,GO:0006508,GO:0008233,GO:0009372;gene=agrB;Parent=GCA000160335_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07813,SO:0001217,UniParc:UPI00019CD809,UniRef:UniRef100_A0A0Z3EV68,UniRef:UniRef50_Q8NVK5,UniRef:UniRef90_Q8NVK5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	2037612	2037752	.	+	.	ID=GCA000160335_02009_gene;locus_tag=GCA000160335_02009;gene=agrD
contig_1	Pyrodigal	CDS	2037612	2037752	.	+	0	ID=GCA000160335_02009;Name=AgrD protein;locus_tag=GCA000160335_02009;product=AgrD protein;gene=agrD;Parent=GCA000160335_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735197.1,SO:0001217,UniParc:UPI00000D7832,UniRef:UniRef100_A0A7Z7R0F5,UniRef:UniRef50_A0A7H9SJ06,UniRef:UniRef90_A0A7Z7R0F5
contig_1	Pyrodigal	gene	2037777	2039069	.	+	.	ID=GCA000160335_02010_gene;locus_tag=GCA000160335_02010;gene=agrC
contig_1	Pyrodigal	CDS	2037777	2039069	.	+	0	ID=GCA000160335_02010;Name=quorum-sensing sensor histidine kinase AgrC;locus_tag=GCA000160335_02010;product=quorum-sensing sensor histidine kinase AgrC;gene=agrC;Parent=GCA000160335_02010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000387809.1,SO:0001217,UniParc:UPI00000D9F16,UniRef:UniRef100_Q2VFT5,UniRef:UniRef50_Q2FWM5,UniRef:UniRef90_A0A0E1X8R2;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2039088	2039804	.	+	.	ID=GCA000160335_02011_gene;locus_tag=GCA000160335_02011;gene=agrA
contig_1	Pyrodigal	CDS	2039088	2039804	.	+	0	ID=GCA000160335_02011;Name=quorum-sensing response regulator AgrA;locus_tag=GCA000160335_02011;product=quorum-sensing response regulator AgrA;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=agrA;Parent=GCA000160335_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,KEGG:K07707,RefSeq:WP_000688492.1,SO:0001217,UniParc:UPI0000054244,UniRef:UniRef100_Q5HEG2,UniRef:UniRef50_Q5HMY2,UniRef:UniRef90_Q5HEG2
contig_1	Pyrodigal	gene	2040178	2041137	.	-	.	ID=GCA000160335_02012_gene;locus_tag=GCA000160335_02012;gene=rbsK
contig_1	Pyrodigal	CDS	2040178	2041137	.	-	0	ID=GCA000160335_02012;Name=Carbohydrate kinase;locus_tag=GCA000160335_02012;product=Carbohydrate kinase;gene=rbsK;Parent=GCA000160335_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,RefSeq:WP_001253292.1,SO:0001217,UniParc:UPI00003B182F,UniRef:UniRef100_A0A7Z7R0R0,UniRef:UniRef50_A0A0Y9VKF8,UniRef:UniRef90_A0A0Y9VKF8
contig_1	Pyrodigal	gene	2041134	2042627	.	-	.	ID=GCA000160335_02013_gene;locus_tag=GCA000160335_02013;gene=sacC
contig_1	Pyrodigal	CDS	2041134	2042627	.	-	0	ID=GCA000160335_02013;Name=Sucrose-6-phosphate hydrolase;locus_tag=GCA000160335_02013;product=Sucrose-6-phosphate hydrolase;gene=sacC;Parent=GCA000160335_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1621,COG:G,SO:0001217,UniParc:UPI0001D854EC,UniRef:UniRef100_A0A7Z7W269,UniRef:UniRef50_Q05936,UniRef:UniRef90_A0A0H2WWU4
contig_1	Pyrodigal	gene	2042767	2043717	.	-	.	ID=GCA000160335_02014_gene;locus_tag=GCA000160335_02014;gene=purR
contig_1	Pyrodigal	CDS	2042767	2043717	.	-	0	ID=GCA000160335_02014;Name=Sucrose operon repressor%2C putative;locus_tag=GCA000160335_02014;product=Sucrose operon repressor%2C putative;gene=purR;Parent=GCA000160335_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000790325.1,SO:0001217,UniParc:UPI00003B1831,UniRef:UniRef100_A0A166DHT2,UniRef:UniRef50_P74892,UniRef:UniRef90_Q2FWM0
contig_1	Pyrodigal	gene	2043901	2045151	.	-	.	ID=GCA000160335_02015_gene;locus_tag=GCA000160335_02015;gene=amtB
contig_1	Pyrodigal	CDS	2043901	2045151	.	-	0	ID=GCA000160335_02015;Name=Ammonium transporter;locus_tag=GCA000160335_02015;product=Ammonium transporter;gene=amtB;Parent=GCA000160335_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0004,COG:P,KEGG:K03320,RefSeq:WP_001052261.1,SO:0001217,UniParc:UPI00003B1832,UniRef:UniRef100_A0A7Z7W268,UniRef:UniRef50_A0A0D0SEH5,UniRef:UniRef90_A0A113YTI9
contig_1	Pyrodigal	gene	2045360	2045584	.	-	.	ID=GCA000160335_02016_gene;locus_tag=GCA000160335_02016;gene=tusA
contig_1	Pyrodigal	CDS	2045360	2045584	.	-	0	ID=GCA000160335_02016;Name=UPF0033 domain-containing protein;locus_tag=GCA000160335_02016;product=UPF0033 domain-containing protein;gene=tusA;Parent=GCA000160335_02016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_000581078.1,SO:0001217,UniParc:UPI00003B1833,UniRef:UniRef100_A0A0E1XIY6,UniRef:UniRef50_A0A7U7JQM0,UniRef:UniRef90_A0A7U7JQM0
contig_1	Pyrodigal	gene	2045644	2046723	.	-	.	ID=GCA000160335_02017_gene;locus_tag=GCA000160335_02017;gene=yedE
contig_1	Pyrodigal	CDS	2045644	2046723	.	-	0	ID=GCA000160335_02017;Name=YeeE/YedE family protein;locus_tag=GCA000160335_02017;product=YeeE/YedE family protein;gene=yedE;Parent=GCA000160335_02017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2391,COG:R,KEGG:K07112,RefSeq:WP_000266901.1,SO:0001217,UniParc:UPI00003B1834,UniRef:UniRef100_A0AAJ5CTV3,UniRef:UniRef50_A0A7U7JQE1,UniRef:UniRef90_A0A9P2Z014
contig_1	Pyrodigal	gene	2047029	2047664	.	-	.	ID=GCA000160335_02018_gene;locus_tag=GCA000160335_02018;gene=rex
contig_1	Pyrodigal	CDS	2047029	2047664	.	-	0	ID=GCA000160335_02018;Name=redox-sensing transcriptional repressor Rex;locus_tag=GCA000160335_02018;product=redox-sensing transcriptional repressor Rex;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0045892,GO:0051775;gene=rex;Parent=GCA000160335_02018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2344,COG:K,KEGG:K01926,RefSeq:WP_001283612.1,SO:0001217,UniParc:UPI000005424D,UniRef:UniRef100_Q2FWL6,UniRef:UniRef50_Q2FWL6,UniRef:UniRef90_Q2FWL6
contig_1	Pyrodigal	gene	2047917	2049845	.	+	.	ID=GCA000160335_02019_gene;locus_tag=GCA000160335_02019;gene=abc-f
contig_1	Pyrodigal	CDS	2047917	2049845	.	+	0	ID=GCA000160335_02019;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000160335_02019;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000160335_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000602046.1,SO:0001217,UniParc:UPI00003B1835,UniRef:UniRef100_A0A7Z7QZS6,UniRef:UniRef50_A0A131I335,UniRef:UniRef90_A0A131I335
contig_1	Pyrodigal	gene	2050213	2051823	.	+	.	ID=GCA000160335_02020_gene;locus_tag=GCA000160335_02020;gene=mutS
contig_1	Pyrodigal	CDS	2050213	2051823	.	+	0	ID=GCA000160335_02020;Name=MutS domain V protein;locus_tag=GCA000160335_02020;product=MutS domain V protein;gene=mutS;Parent=GCA000160335_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000106312.1,SO:0001217,UniParc:UPI00003B1836,UniRef:UniRef100_A0A7Z7QZS5,UniRef:UniRef50_G5JKS6,UniRef:UniRef90_Q2FWL3
contig_1	Pyrodigal	gene	2052137	2053162	.	-	.	ID=GCA000160335_02021_gene;locus_tag=GCA000160335_02021;gene=tsaD
contig_1	Pyrodigal	CDS	2052137	2053162	.	-	0	ID=GCA000160335_02021;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000160335_02021;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000160335_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_000159047.1,SO:0001217,UniParc:UPI00003B1837,UniRef:UniRef100_Q6GF23,UniRef:UniRef50_Q2FWL2,UniRef:UniRef90_Q2FWL2;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2053155	2053619	.	-	.	ID=GCA000160335_02022_gene;locus_tag=GCA000160335_02022;gene=rimI
contig_1	Pyrodigal	CDS	2053155	2053619	.	-	0	ID=GCA000160335_02022;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000160335_02022;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0008999,GO:0036211,GO:0042254;gene=rimI;Parent=GCA000160335_02022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000372755.1,SO:0001217,UniParc:UPI00000D9F20,UniRef:UniRef100_A0A7Z7R064,UniRef:UniRef50_A0A855GHV1,UniRef:UniRef90_A0A7U7PW89;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	2053592	2054254	.	-	.	ID=GCA000160335_02023_gene;locus_tag=GCA000160335_02023;gene=tsaB
contig_1	Pyrodigal	CDS	2053592	2054254	.	-	0	ID=GCA000160335_02023;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000160335_02023;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949;gene=tsaB;Parent=GCA000160335_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_001086735.1,SO:0001217,UniParc:UPI00003B1838,UniRef:UniRef100_A0A0E1X8K3,UniRef:UniRef50_A0AAE2ZX37,UniRef:UniRef90_A0AAE2ZX37;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2054235	2054729	.	-	.	ID=GCA000160335_02024_gene;locus_tag=GCA000160335_02024;gene=tsaE
contig_1	Pyrodigal	CDS	2054235	2054729	.	-	0	ID=GCA000160335_02024;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000160335_02024;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949;gene=tsaE;Parent=GCA000160335_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,SO:0001217,UniParc:UPI00003B1839,UniRef:UniRef100_A0A7Z7QZZ6,UniRef:UniRef50_A0A0D1JSJ2,UniRef:UniRef90_A0A0D1JSJ2
contig_1	Infernal	gene	2054898	2055102	.	+	.	ID=GCA000160335_02025_gene;locus_tag=GCA000160335_02025;gene=rli60
contig_1	Infernal	ncRNA	2054898	2055102	1.3e-17	+	.	ID=GCA000160335_02025;Name=Listeria sRNA rli60;locus_tag=GCA000160335_02025;product=Listeria sRNA rli60;Dbxref=RFAM:RF02414;Parent=GCA000160335_02025_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02414
contig_1	Pyrodigal	gene	2055207	2056895	.	+	.	ID=GCA000160335_02026_gene;locus_tag=GCA000160335_02026;gene=ilvD
contig_1	Pyrodigal	CDS	2055207	2056895	.	+	0	ID=GCA000160335_02026;Name=dihydroxy-acid dehydratase;locus_tag=GCA000160335_02026;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0051536,GO:0051537;gene=ilvD;Parent=GCA000160335_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_001255785.1,SO:0001217,UniParc:UPI00003B183A,UniRef:UniRef100_Q6GF19,UniRef:UniRef50_Q2FWK7,UniRef:UniRef90_Q2FWK7;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	2056923	2058692	.	+	.	ID=GCA000160335_02027_gene;locus_tag=GCA000160335_02027;gene=ilvB
contig_1	Pyrodigal	CDS	2056923	2058692	.	+	0	ID=GCA000160335_02027;Name=biosynthetic-type acetolactate synthase large subunit;locus_tag=GCA000160335_02027;product=biosynthetic-type acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003984,GO:0009082,GO:0030976,GO:0050660;gene=ilvB;Parent=GCA000160335_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_000047828.1,SO:0001217,UniParc:UPI00003B183B,UniRef:UniRef100_A0A0E1XAU7,UniRef:UniRef50_Q02137,UniRef:UniRef90_A0A0E1XAU7;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2058692	2058946	.	+	.	ID=GCA000160335_02028_gene;locus_tag=GCA000160335_02028;gene=ilvH
contig_1	Pyrodigal	CDS	2058692	2058946	.	+	0	ID=GCA000160335_02028;Name=ACT domain-containing protein;locus_tag=GCA000160335_02028;product=ACT domain-containing protein;gene=ilvH;Parent=GCA000160335_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0440,COG:E,KEGG:K01653,RefSeq:WP_000196911.1,SO:0001217,UniParc:UPI0000054257,UniRef:UniRef100_Q2FWK5,UniRef:UniRef50_A0A7Z8E1T8,UniRef:UniRef90_Q2FWK5;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2059083	2060087	.	+	.	ID=GCA000160335_02029_gene;locus_tag=GCA000160335_02029;gene=ilvC
contig_1	Pyrodigal	CDS	2059083	2060087	.	+	0	ID=GCA000160335_02029;Name=ketol-acid reductoisomerase;locus_tag=GCA000160335_02029;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009097,GO:0009099,GO:0050661;gene=ilvC;Parent=GCA000160335_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0059,COG:EH,KEGG:K00053,RefSeq:WP_000214552.1,SO:0001217,UniParc:UPI00000D7826,UniRef:UniRef100_P65151,UniRef:UniRef50_Q58938,UniRef:UniRef90_Q2FWK4;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	2060117	2061646	.	+	.	ID=GCA000160335_02030_gene;locus_tag=GCA000160335_02030;gene=leuA
contig_1	Pyrodigal	CDS	2060117	2061646	.	+	0	ID=GCA000160335_02030;Name=2-isopropylmalate synthase;locus_tag=GCA000160335_02030;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0003985,GO:0005737,GO:0009098,GO:0030145;gene=leuA;Parent=GCA000160335_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,KEGG:K01649,RefSeq:WP_000094575.1,SO:0001217,UniParc:UPI00019F4CE8,UniRef:UniRef100_A0A7Z7W2L4,UniRef:UniRef50_P94565,UniRef:UniRef90_Q2FWK3;ec_number=2.3.3.13
contig_1	Pyrodigal	gene	2061649	2062695	.	+	.	ID=GCA000160335_02031_gene;locus_tag=GCA000160335_02031;gene=leuB
contig_1	Pyrodigal	CDS	2061649	2062695	.	+	0	ID=GCA000160335_02031;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000160335_02031;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0000287,GO:0003862,GO:0005829,GO:0009098,GO:0051287;gene=leuB;Parent=GCA000160335_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG0473,KEGG:K00052,RefSeq:WP_000221936.1,SO:0001217,UniParc:UPI00019CD7DB,UniRef:UniRef100_A0A7Z7W273,UniRef:UniRef50_P12010,UniRef:UniRef90_Q2FWK2;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	2062709	2064079	.	+	.	ID=GCA000160335_02032_gene;locus_tag=GCA000160335_02032;gene=leuC
contig_1	Pyrodigal	CDS	2062709	2064079	.	+	0	ID=GCA000160335_02032;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000160335_02032;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000160335_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0065,COG:E,KEGG:K01703,RefSeq:WP_000531823.1,SO:0001217,UniParc:UPI000005425B,UniRef:UniRef100_Q2FWK1,UniRef:UniRef50_P80858,UniRef:UniRef90_Q2FWK1;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2064080	2064652	.	+	.	ID=GCA000160335_02033_gene;locus_tag=GCA000160335_02033;gene=leuD
contig_1	Pyrodigal	CDS	2064080	2064652	.	+	0	ID=GCA000160335_02033;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000160335_02033;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000160335_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0066,COG:E,RefSeq:WP_000718949.1,SO:0001217,UniParc:UPI00003B183F,UniRef:UniRef100_Q6GF13,UniRef:UniRef50_Q8Y5R6,UniRef:UniRef90_Q2FWK0;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2064667	2065935	.	+	.	ID=GCA000160335_02034_gene;locus_tag=GCA000160335_02034;gene=ilvA
contig_1	Pyrodigal	CDS	2064667	2065935	.	+	0	ID=GCA000160335_02034;Name=threonine ammonia-lyase IlvA;locus_tag=GCA000160335_02034;product=threonine ammonia-lyase IlvA;Dbxref=GO:0003941,GO:0004794,GO:0006520,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000160335_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000216850.1,SO:0001217,UniParc:UPI00003B1840,UniRef:UniRef100_Q3V7T5,UniRef:UniRef50_P37946,UniRef:UniRef90_Q2FWJ9;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	2066012	2066428	.	-	.	ID=GCA000160335_02035_gene;locus_tag=GCA000160335_02035
contig_1	Pyrodigal	CDS	2066012	2066428	.	-	0	ID=GCA000160335_02035;Name=Lipoprotein;locus_tag=GCA000160335_02035;product=Lipoprotein;Parent=GCA000160335_02035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000688536.1,SO:0001217,UniParc:UPI00003B1841,UniRef:UniRef100_A0A7Z7QZU2,UniRef:UniRef50_A0A077UKX2,UniRef:UniRef90_A0A077UKX2
contig_1	Pyrodigal	gene	2066817	2067545	.	+	.	ID=GCA000160335_02036_gene;locus_tag=GCA000160335_02036;gene=tnp
contig_1	Pyrodigal	CDS	2066817	2067545	.	+	0	ID=GCA000160335_02036;Name=IS3 family ISSau2 transposase ORF A;locus_tag=GCA000160335_02036;product=IS3 family ISSau2 transposase ORF A;gene=tnp;Parent=GCA000160335_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau2,RefSeq:WP_000023693.1,SO:0001217,UniParc:UPI0001C0B7AB,UniRef:UniRef100_A0A0E1X7K9,UniRef:UniRef50_E0D531,UniRef:UniRef90_A0A0E1X7K9
contig_1	Pyrodigal	gene	2067569	2068357	.	+	.	ID=GCA000160335_02037_gene;locus_tag=GCA000160335_02037;gene=tnp
contig_1	Pyrodigal	CDS	2067569	2068357	.	+	0	ID=GCA000160335_02037;Name=IS3 family transposase ORF B;locus_tag=GCA000160335_02037;product=IS3 family transposase ORF B;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_02037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B142B,UniRef:UniRef100_A0A162FEK7,UniRef:UniRef50_Q49YK3,UniRef:UniRef90_A0A162FEK7
contig_1	Infernal	gene	2068443	2068557	.	-	.	ID=GCA000160335_02038_gene;locus_tag=GCA000160335_02038;gene=rrf
contig_1	Infernal	rRNA	2068443	2068557	1.1e-14	-	.	ID=GCA000160335_02038;Name=5S ribosomal RNA;locus_tag=GCA000160335_02038;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000160335_02038_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2068630	2071552	.	-	.	ID=GCA000160335_02039_gene;locus_tag=GCA000160335_02039;gene=rrl
contig_1	Infernal	rRNA	2068630	2071552	1.4e-06	-	.	ID=GCA000160335_02039;Name=23S ribosomal RNA;locus_tag=GCA000160335_02039;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000160335_02039_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	2071843	2071919	.	-	.	ID=GCA000160335_02040_gene;locus_tag=GCA000160335_02040;gene=trnI
contig_1	tRNAscan-SE	tRNA	2071843	2071919	.	-	.	ID=GCA000160335_02040;Name=tRNA-Ile(gat);locus_tag=GCA000160335_02040;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000160335_02040_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	2072013	2073564	.	-	.	ID=GCA000160335_02041_gene;locus_tag=GCA000160335_02041;gene=rrs
contig_1	Infernal	rRNA	2072013	2073564	1.3e-49	-	.	ID=GCA000160335_02041;Name=16S ribosomal RNA;locus_tag=GCA000160335_02041;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000160335_02041_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	2073684	2073757	.	-	.	ID=GCA000160335_02042_gene;locus_tag=GCA000160335_02042;gene=trnG
contig_1	tRNAscan-SE	tRNA	2073684	2073757	.	-	.	ID=GCA000160335_02042;Name=tRNA-Gly(tcc);locus_tag=GCA000160335_02042;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000160335_02042_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2073779	2073861	.	-	.	ID=GCA000160335_02043_gene;locus_tag=GCA000160335_02043;gene=trnL
contig_1	tRNAscan-SE	tRNA	2073779	2073861	.	-	.	ID=GCA000160335_02043;Name=tRNA-Leu(gag);locus_tag=GCA000160335_02043;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000160335_02043_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	2074508	2074963	.	-	.	ID=GCA000160335_02044_gene;locus_tag=GCA000160335_02044;gene=sprT
contig_1	Pyrodigal	CDS	2074508	2074963	.	-	0	ID=GCA000160335_02044;Name=SprT family protein;locus_tag=GCA000160335_02044;product=SprT family protein;Dbxref=GO:0005737,GO:0008270,GO:0033554;gene=sprT;Parent=GCA000160335_02044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,RefSeq:WP_001058376.1,SO:0001217,UniParc:UPI00003B1842,UniRef:UniRef100_Q6GF11,UniRef:UniRef50_Q8Y8K2,UniRef:UniRef90_Q2FWJ6
contig_1	Pyrodigal	gene	2074956	2077094	.	-	.	ID=GCA000160335_02045_gene;locus_tag=GCA000160335_02045;gene=tex
contig_1	Pyrodigal	CDS	2074956	2077094	.	-	0	ID=GCA000160335_02045;Name=S1 motif domain-containing protein;locus_tag=GCA000160335_02045;product=S1 motif domain-containing protein;gene=tex;Parent=GCA000160335_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,SO:0001217,UniParc:UPI0002C90F9D,UniRef:UniRef100_A0A7Z7QZW5,UniRef:UniRef50_A0A1M6SVE8,UniRef:UniRef90_A0A0H3JYF6
contig_1	Pyrodigal	gene	2077541	2078311	.	-	.	ID=GCA000160335_02046_gene;locus_tag=GCA000160335_02046;gene=sigB
contig_1	Pyrodigal	CDS	2077541	2078311	.	-	0	ID=GCA000160335_02046;Name=RNA polymerase sigma factor SigB;locus_tag=GCA000160335_02046;product=RNA polymerase sigma factor SigB;Dbxref=GO:0003700,GO:0006352,GO:0016987;gene=sigB;Parent=GCA000160335_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1191,COG:K,KEGG:K03090,RefSeq:WP_001041107.1,SO:0001217,UniParc:UPI00003B1844,UniRef:UniRef100_A0A7Z7R074,UniRef:UniRef50_P06574,UniRef:UniRef90_A0A390QYZ6
contig_1	Pyrodigal	gene	2078286	2078765	.	-	.	ID=GCA000160335_02047_gene;locus_tag=GCA000160335_02047;gene=rsbW
contig_1	Pyrodigal	CDS	2078286	2078765	.	-	0	ID=GCA000160335_02047;Name=anti-sigma B factor RsbW;locus_tag=GCA000160335_02047;product=anti-sigma B factor RsbW;Dbxref=GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0006468,GO:0016989,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045892,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=rsbW;Parent=GCA000160335_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2172,COG:T,RefSeq:WP_001190825.1,SO:0001217,UniParc:UPI00003B1845,UniRef:UniRef100_Q6GF08,UniRef:UniRef50_P17904,UniRef:UniRef90_Q2FWJ3;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	2078767	2079093	.	-	.	ID=GCA000160335_02048_gene;locus_tag=GCA000160335_02048;gene=rsbV
contig_1	Pyrodigal	CDS	2078767	2079093	.	-	0	ID=GCA000160335_02048;Name=Anti-sigma-B factor antagonist;locus_tag=GCA000160335_02048;product=Anti-sigma-B factor antagonist;Dbxref=GO:0043856;gene=rsbV;Parent=GCA000160335_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5815,COG:DT,RefSeq:WP_001052491.1,SO:0001217,UniParc:UPI00000545BE,UniRef:UniRef100_P60070,UniRef:UniRef50_P60070,UniRef:UniRef90_P60070
contig_1	Pyrodigal	gene	2079212	2080213	.	-	.	ID=GCA000160335_02049_gene;locus_tag=GCA000160335_02049;gene=rsbU
contig_1	Pyrodigal	CDS	2079212	2080213	.	-	0	ID=GCA000160335_02049;Name=RsbU;locus_tag=GCA000160335_02049;product=RsbU;gene=rsbU;Parent=GCA000160335_02049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2208,COG:TK,RefSeq:WP_000390829.1,SO:0001217,UniParc:UPI00000D76B3,UniRef:UniRef100_A0A7Z7R0V7,UniRef:UniRef50_S2XRQ7,UniRef:UniRef90_A0A2K4AFK3
contig_1	Pyrodigal	gene	2080563	2080925	.	-	.	ID=GCA000160335_02050_gene;locus_tag=GCA000160335_02050;gene=mazF
contig_1	Pyrodigal	CDS	2080563	2080925	.	-	0	ID=GCA000160335_02050;Name=Endoribonuclease MazF;locus_tag=GCA000160335_02050;product=Endoribonuclease MazF;Dbxref=GO:0003677,GO:0003723,GO:0004521,GO:0006402,GO:0016075;gene=mazF;Parent=GCA000160335_02050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2337,COG:V,RefSeq:WP_000621176.1,SO:0001217,UniParc:UPI00003B1846,UniRef:UniRef100_Q6GF05,UniRef:UniRef50_Q2FWI8,UniRef:UniRef90_Q2FWI8;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2080922	2081092	.	-	.	ID=GCA000160335_02051_gene;locus_tag=GCA000160335_02051;gene=mazE
contig_1	Pyrodigal	CDS	2080922	2081092	.	-	0	ID=GCA000160335_02051;Name=type II toxin-antitoxin system antitoxin MazE;locus_tag=GCA000160335_02051;product=type II toxin-antitoxin system antitoxin MazE;Dbxref=GO:0006355;gene=mazE;Parent=GCA000160335_02051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000948331,BlastRules:WP_001829931,BlastRules:WP_011275271,BlastRules:WP_011302702,RefSeq:WP_000948331.1,SO:0001217,UniParc:UPI00000D780C,UniRef:UniRef100_Q2FWI7,UniRef:UniRef50_Q2FWI7,UniRef:UniRef90_Q2FWI7
contig_1	Pyrodigal	gene	2081177	2082325	.	-	.	ID=GCA000160335_02052_gene;locus_tag=GCA000160335_02052;gene=alr
contig_1	Pyrodigal	CDS	2081177	2082325	.	-	0	ID=GCA000160335_02052;Name=alanine racemase;locus_tag=GCA000160335_02052;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000160335_02052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_001281140.1,SO:0001217,UniParc:UPI00003B1847,UniRef:UniRef100_Q6GF03,UniRef:UniRef50_P63479,UniRef:UniRef90_P63479;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	2082391	2082750	.	-	.	ID=GCA000160335_02053_gene;locus_tag=GCA000160335_02053;gene=acpS
contig_1	Pyrodigal	CDS	2082391	2082750	.	-	0	ID=GCA000160335_02053;Name=Holo-[acyl-carrier-protein] synthase;locus_tag=GCA000160335_02053;product=Holo-[acyl-carrier-protein] synthase;Dbxref=GO:0000287,GO:0005737,GO:0006633,GO:0008897;gene=acpS;Parent=GCA000160335_02053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0736,COG:I,RefSeq:WP_000581197.1,SO:0001217,UniParc:UPI0000125346,UniRef:UniRef100_P63468,UniRef:UniRef50_Q9ZAH6,UniRef:UniRef90_Q9ZAH6;ec_number=2.7.8.7
contig_1	Pyrodigal	gene	2082754	2083248	.	-	.	ID=GCA000160335_02054_gene;locus_tag=GCA000160335_02054;gene=ydbS
contig_1	Pyrodigal	CDS	2082754	2083248	.	-	0	ID=GCA000160335_02054;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000160335_02054;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000160335_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,SO:0001217,UniRef:UniRef50_Q2FWI4,UniRef:UniRef90_Q2FWI4
contig_1	Pyrodigal	gene	2083238	2084815	.	-	.	ID=GCA000160335_02055_gene;locus_tag=GCA000160335_02055;gene=ydbT
contig_1	Pyrodigal	CDS	2083238	2084815	.	-	0	ID=GCA000160335_02055;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000160335_02055;product=YdbS-like PH domain-containing protein;gene=ydbT;Parent=GCA000160335_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3428,COG:S,KEGG:K08981,RefSeq:WP_001294647.1,SO:0001217,UniParc:UPI0001B702A7,UniRef:UniRef100_UPI0001B702A7,UniRef:UniRef50_A0A2K4AEP0,UniRef:UniRef90_Q2FWI3
contig_1	Pyrodigal	gene	2084808	2085287	.	-	.	ID=GCA000160335_02056_gene;locus_tag=GCA000160335_02056;gene=ydbS
contig_1	Pyrodigal	CDS	2084808	2085287	.	-	0	ID=GCA000160335_02056;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000160335_02056;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000160335_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,RefSeq:WP_001287082.1,SO:0001217,UniParc:UPI00003B184A,UniRef:UniRef100_A0A7Z7R0I4,UniRef:UniRef50_Q2FWI2,UniRef:UniRef90_Q2FWI2
contig_1	Pyrodigal	gene	2085496	2086056	.	-	.	ID=GCA000160335_02057_gene;locus_tag=GCA000160335_02057;gene=kdpC
contig_1	Pyrodigal	CDS	2085496	2086056	.	-	0	ID=GCA000160335_02057;Name=K(+)-transporting ATPase subunit C;locus_tag=GCA000160335_02057;product=K(+)-transporting ATPase subunit C;Dbxref=GO:0005524,GO:0005886,GO:0008556,GO:0071805;gene=kdpC;Parent=GCA000160335_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2156,COG:P,RefSeq:WP_001092414.1,SO:0001217,UniParc:UPI00003B184B,UniRef:UniRef100_Q6GEZ8,UniRef:UniRef50_Q2FWI1,UniRef:UniRef90_Q2FWI1
contig_1	Pyrodigal	gene	2086076	2088103	.	-	.	ID=GCA000160335_02058_gene;locus_tag=GCA000160335_02058;gene=kdpB
contig_1	Pyrodigal	CDS	2086076	2088103	.	-	0	ID=GCA000160335_02058;Name=potassium-transporting ATPase subunit KdpB;locus_tag=GCA000160335_02058;product=potassium-transporting ATPase subunit KdpB;Dbxref=GO:0000287,GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0016020,GO:0016887,GO:0031004;gene=kdpB;Parent=GCA000160335_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2216,COG:P,RefSeq:WP_000546609.1,SO:0001217,UniParc:UPI00003B184C,UniRef:UniRef100_Q6GEZ7,UniRef:UniRef50_P63683,UniRef:UniRef90_P63683;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2088122	2089798	.	-	.	ID=GCA000160335_02059_gene;locus_tag=GCA000160335_02059;gene=kdpA
contig_1	Pyrodigal	CDS	2088122	2089798	.	-	0	ID=GCA000160335_02059;Name=potassium-transporting ATPase subunit KdpA;locus_tag=GCA000160335_02059;product=potassium-transporting ATPase subunit KdpA;Dbxref=GO:0005886,GO:0006813,GO:0008556,GO:0030955,GO:0031004;gene=kdpA;Parent=GCA000160335_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2060,COG:P,KEGG:K01546,RefSeq:WP_000402645.1,SO:0001217,UniParc:UPI00019CD7A6,UniRef:UniRef100_A0A7Z7QZX7,UniRef:UniRef50_Q2FWH9,UniRef:UniRef90_Q2FWH9;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2090070	2092727	.	+	.	ID=GCA000160335_02060_gene;locus_tag=GCA000160335_02060;gene=kdpD
contig_1	Pyrodigal	CDS	2090070	2092727	.	+	0	ID=GCA000160335_02060;Name=Sensor histidine kinase KdpD;locus_tag=GCA000160335_02060;product=Sensor histidine kinase KdpD;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=kdpD;Parent=GCA000160335_02060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2205,COG:T,RefSeq:WP_000072295.1,SO:0001217,UniParc:UPI00003B184E,UniRef:UniRef100_A0A0E1X8H3,UniRef:UniRef50_Q2FWH7,UniRef:UniRef90_Q2FWH7;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2092727	2093422	.	+	.	ID=GCA000160335_02061_gene;locus_tag=GCA000160335_02061;gene=kdpE
contig_1	Pyrodigal	CDS	2092727	2093422	.	+	0	ID=GCA000160335_02061;Name=Transcriptional regulatory protein KdpE;locus_tag=GCA000160335_02061;product=Transcriptional regulatory protein KdpE;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=kdpE;Parent=GCA000160335_02061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001190845.1,SO:0001217,UniParc:UPI00003B184F,UniRef:UniRef100_A0A0H2JZU7,UniRef:UniRef50_Q2FWH6,UniRef:UniRef90_Q2FWH6
contig_1	Pyrodigal	gene	2093778	2095298	.	-	.	ID=GCA000160335_02062_gene;locus_tag=GCA000160335_02062;gene=cshA
contig_1	Pyrodigal	CDS	2093778	2095298	.	-	0	ID=GCA000160335_02062;Name=DEAD-box ATP-dependent RNA helicase CshA;locus_tag=GCA000160335_02062;product=DEAD-box ATP-dependent RNA helicase CshA;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0005840,GO:0006401,GO:0009409,GO:0010501,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshA;Parent=GCA000160335_02062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001178930.1,SO:0001217,UniParc:UPI0001B7013E,UniRef:UniRef100_UPI0001B7013E,UniRef:UniRef50_Q2FWH5,UniRef:UniRef90_Q2FWH5;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	2095815	2097173	.	-	.	ID=GCA000160335_02063_gene;locus_tag=GCA000160335_02063;gene=murF
contig_1	Pyrodigal	CDS	2095815	2097173	.	-	0	ID=GCA000160335_02063;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000160335_02063;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008766,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000160335_02063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,RefSeq:WP_000611456.1,SO:0001217,UniParc:UPI00003B1851,UniRef:UniRef100_A0A7Z7R0W7,UniRef:UniRef50_Q2FWH4,UniRef:UniRef90_Q2FWH4;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	2097188	2098258	.	-	.	ID=GCA000160335_02064_gene;locus_tag=GCA000160335_02064;gene=ddl
contig_1	Pyrodigal	CDS	2097188	2098258	.	-	0	ID=GCA000160335_02064;Name=D-alanine--D-alanine ligase;locus_tag=GCA000160335_02064;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddl;Parent=GCA000160335_02064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_000159638.1,SO:0001217,UniParc:UPI0001B7013F,UniRef:UniRef100_A0A2X2K113,UniRef:UniRef50_Q8NVH8,UniRef:UniRef90_Q8NVH8;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	2098576	2099778	.	+	.	ID=GCA000160335_02065_gene;locus_tag=GCA000160335_02065;gene=ftsW
contig_1	Pyrodigal	CDS	2098576	2099778	.	+	0	ID=GCA000160335_02065;Name=Rod shape-determining protein RodA;locus_tag=GCA000160335_02065;product=Rod shape-determining protein RodA;gene=ftsW;Parent=GCA000160335_02065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_001109940.1,SO:0001217,UniParc:UPI0001B70140,UniRef:UniRef100_UPI0001B70140,UniRef:UniRef50_Q2FWH2,UniRef:UniRef90_Q2FWH2
contig_1	Pyrodigal	gene	2099939	2100115	.	-	.	ID=GCA000160335_02066_gene;locus_tag=GCA000160335_02066
contig_1	Pyrodigal	CDS	2099939	2100115	.	-	0	ID=GCA000160335_02066;Name=Putative transposase;locus_tag=GCA000160335_02066;product=Putative transposase;Parent=GCA000160335_02066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4E67,UniRef:UniRef100_A0A2X2JUQ3,UniRef:UniRef50_A0A2C6WC67,UniRef:UniRef90_A0A2X2JUQ3
contig_1	Pyrodigal	gene	2100202	2100894	.	-	.	ID=GCA000160335_02067_gene;locus_tag=GCA000160335_02067
contig_1	Pyrodigal	CDS	2100202	2100894	.	-	0	ID=GCA000160335_02067;Name=transposase;locus_tag=GCA000160335_02067;product=transposase;Parent=GCA000160335_02067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2C6WC67,UniRef:UniRef90_UPI001CCC5110
contig_1	Infernal	gene	2100941	2101233	.	+	.	ID=GCA000160335_02068_gene;locus_tag=GCA000160335_02068;gene=tsr24
contig_1	Infernal	ncRNA	2100941	2101233	3.9e-16	+	.	ID=GCA000160335_02068;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_02068;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_02068_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2101417	2101554	.	-	.	ID=GCA000160335_02069_gene;locus_tag=GCA000160335_02069
contig_1	Pyrodigal	CDS	2101417	2101554	.	-	0	ID=GCA000160335_02069;Name=Lmo0850 family protein;locus_tag=GCA000160335_02069;product=Lmo0850 family protein;Parent=GCA000160335_02069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000828354.1,SO:0001217,UniParc:UPI00000D7764,UniRef:UniRef100_Q2FWH1,UniRef:UniRef50_A0A0H2VHK0,UniRef:UniRef90_Q2FWH1
contig_1	Pyrodigal	gene	2101682	2101891	.	-	.	ID=GCA000160335_02070_gene;locus_tag=GCA000160335_02070;gene=csoZ
contig_1	Pyrodigal	CDS	2101682	2101891	.	-	0	ID=GCA000160335_02070;Name=putative copper chaperone CsoZ;locus_tag=GCA000160335_02070;product=putative copper chaperone CsoZ;gene=csoZ;Parent=GCA000160335_02070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000581791.1,SO:0001217,UniParc:UPI00003B1853,UniRef:UniRef100_A0A7Z7W2M5,UniRef:UniRef50_Q2FWH0,UniRef:UniRef90_Q2FWH0
contig_1	Pyrodigal	gene	2101903	2102196	.	-	.	ID=GCA000160335_02071_gene;locus_tag=GCA000160335_02071;gene=csoR
contig_1	Pyrodigal	CDS	2101903	2102196	.	-	0	ID=GCA000160335_02071;Name=copper-sensing transcriptional repressor CsoR;locus_tag=GCA000160335_02071;product=copper-sensing transcriptional repressor CsoR;gene=csoR;Parent=GCA000160335_02071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000138932,COG:COG1937,COG:K,KEGG:K21600,RefSeq:WP_000138934.1,SO:0001217,UniParc:UPI0001B70141,UniRef:UniRef100_A0A0E1X8G5,UniRef:UniRef50_K9AII0,UniRef:UniRef90_Q2FWG9
contig_1	Pyrodigal	gene	2102362	2103846	.	+	.	ID=GCA000160335_02072_gene;locus_tag=GCA000160335_02072;gene=cls
contig_1	Pyrodigal	CDS	2102362	2103846	.	+	0	ID=GCA000160335_02072;Name=cardiolipin synthase;locus_tag=GCA000160335_02072;product=cardiolipin synthase;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000160335_02072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_000571560.1,SO:0001217,UniParc:UPI00003B1854,UniRef:UniRef100_Q6GEY7,UniRef:UniRef50_Q8Y4E3,UniRef:UniRef90_Q5HEB2;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2103874	2104521	.	+	.	ID=GCA000160335_02073_gene;locus_tag=GCA000160335_02073;gene=rnaY
contig_1	Pyrodigal	CDS	2103874	2104521	.	+	0	ID=GCA000160335_02073;Name=HD domain-containing protein;locus_tag=GCA000160335_02073;product=HD domain-containing protein;gene=rnaY;Parent=GCA000160335_02073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,KEGG:K06950,RefSeq:WP_001187612.1,SO:0001217,UniParc:UPI00003B1855,UniRef:UniRef100_A0A0E1X8K5,UniRef:UniRef50_Q2FWG7,UniRef:UniRef90_Q2FWG7
contig_1	Pyrodigal	gene	2105136	2106008	.	-	.	ID=GCA000160335_02074_gene;locus_tag=GCA000160335_02074;gene=yidC
contig_1	Pyrodigal	CDS	2105136	2106008	.	-	0	ID=GCA000160335_02074;Name=Membrane protein insertase YidC;locus_tag=GCA000160335_02074;product=Membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000160335_02074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_000725802.1,SO:0001217,UniParc:UPI00000522A6,UniRef:UniRef100_Q2FWG4,UniRef:UniRef50_Q8CMK8,UniRef:UniRef90_Q2FWG4
contig_1	Pyrodigal	gene	2106094	2106735	.	-	.	ID=GCA000160335_02075_gene;locus_tag=GCA000160335_02075;gene=thiE
contig_1	Pyrodigal	CDS	2106094	2106735	.	-	0	ID=GCA000160335_02075;Name=Thiamine-phosphate synthase;locus_tag=GCA000160335_02075;product=Thiamine-phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000160335_02075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0352,COG:H,RefSeq:WP_000483150.1,SO:0001217,UniParc:UPI00003B1857,UniRef:UniRef100_Q6GEY4,UniRef:UniRef50_Q5HMD0,UniRef:UniRef90_Q2FWG3;ec_number=2.5.1.3
contig_1	Pyrodigal	gene	2106737	2107528	.	-	.	ID=GCA000160335_02076_gene;locus_tag=GCA000160335_02076;gene=thiM
contig_1	Pyrodigal	CDS	2106737	2107528	.	-	0	ID=GCA000160335_02076;Name=hydroxyethylthiazole kinase;locus_tag=GCA000160335_02076;product=hydroxyethylthiazole kinase;Dbxref=GO:0000287,GO:0004417,GO:0005524,GO:0009228,GO:0009229;gene=thiM;Parent=GCA000160335_02076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2145,COG:H,RefSeq:WP_001108496.1,SO:0001217,UniParc:UPI00003B1858,UniRef:UniRef100_Q6GEY3,UniRef:UniRef50_Q6GEY3,UniRef:UniRef90_Q6GEY3;ec_number=2.7.1.50
contig_1	Pyrodigal	gene	2107512	2108342	.	-	.	ID=GCA000160335_02077_gene;locus_tag=GCA000160335_02077;gene=thiD
contig_1	Pyrodigal	CDS	2107512	2108342	.	-	0	ID=GCA000160335_02077;Name=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;locus_tag=GCA000160335_02077;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229;gene=thiD;Parent=GCA000160335_02077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_000594963.1,SO:0001217,UniParc:UPI00003B1859,UniRef:UniRef100_Q6GEY2,UniRef:UniRef50_P66915,UniRef:UniRef90_P66915;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	2108335	2109024	.	-	.	ID=GCA000160335_02078_gene;locus_tag=GCA000160335_02078;gene=tenA
contig_1	Pyrodigal	CDS	2108335	2109024	.	-	0	ID=GCA000160335_02078;Name=thiaminase II;locus_tag=GCA000160335_02078;product=thiaminase II;Dbxref=GO:0005829,GO:0006772,GO:0009228,GO:0009229,GO:0050334;gene=tenA;Parent=GCA000160335_02078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0819,COG:H,RefSeq:WP_000396068.1,SO:0001217,UniParc:UPI00003B185A,UniRef:UniRef100_Q6GEY1,UniRef:UniRef50_Q6GEY1,UniRef:UniRef90_Q6GEY1;ec_number=3.5.99.2
contig_1	Infernal	regulatory_region	2109104	2109206	2.5e-13	-	.	ID=HBCHLJIIAO_162;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	2109551	2110246	.	-	.	ID=GCA000160335_02079_gene;locus_tag=GCA000160335_02079;gene=sceD
contig_1	Pyrodigal	CDS	2109551	2110246	.	-	0	ID=GCA000160335_02079;Name=lytic transglycosylase SceD;locus_tag=GCA000160335_02079;product=lytic transglycosylase SceD;Dbxref=GO:0005576,GO:0016798;gene=sceD;Parent=GCA000160335_02079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000752009,RefSeq:WP_000752015.1,SO:0001217,UniParc:UPI00003B185C,UniRef:UniRef100_Q6GEX9,UniRef:UniRef50_Q2FWF8,UniRef:UniRef90_Q2FWF8;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2110635	2111030	.	-	.	ID=GCA000160335_02080_gene;locus_tag=GCA000160335_02080;gene=ssb
contig_1	Pyrodigal	CDS	2110635	2111030	.	-	0	ID=GCA000160335_02080;Name=Single-stranded DNA-binding protein;locus_tag=GCA000160335_02080;product=Single-stranded DNA-binding protein;gene=ssb;Parent=GCA000160335_02080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000932696.1,SO:0001217,UniParc:UPI00003B185D,UniRef:UniRef100_A0A7Z7R0X8,UniRef:UniRef50_K9AX51,UniRef:UniRef90_A0A7U7PX14
contig_1	Pyrodigal	gene	2111224	2111664	.	+	.	ID=GCA000160335_02081_gene;locus_tag=GCA000160335_02081;gene=ywpF
contig_1	Pyrodigal	CDS	2111224	2111664	.	+	0	ID=GCA000160335_02081;Name=YwpF protein;locus_tag=GCA000160335_02081;product=YwpF protein;gene=ywpF;Parent=GCA000160335_02081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846746.1,SO:0001217,UniParc:UPI00000D77B6,UniRef:UniRef100_Q2FWF6,UniRef:UniRef50_Q2FWF6,UniRef:UniRef90_Q2FWF6
contig_1	Pyrodigal	gene	2111721	2112161	.	-	.	ID=GCA000160335_02082_gene;locus_tag=GCA000160335_02082;gene=fabZ
contig_1	Pyrodigal	CDS	2111721	2112161	.	-	0	ID=GCA000160335_02082;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA000160335_02082;product=3-hydroxyacyl-ACP dehydratase FabZ;Dbxref=GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171;gene=fabZ;Parent=GCA000160335_02082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,RefSeq:WP_000447678.1,SO:0001217,UniParc:UPI00000545E6,UniRef:UniRef100_Q2FWF5,UniRef:UniRef50_Q2FWF5,UniRef:UniRef90_Q2FWF5;ec_number=4.2.1.59
contig_1	Pyrodigal	gene	2112195	2113460	.	-	.	ID=GCA000160335_02083_gene;locus_tag=GCA000160335_02083;gene=murA
contig_1	Pyrodigal	CDS	2112195	2113460	.	-	0	ID=GCA000160335_02083;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000160335_02083;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA;Parent=GCA000160335_02083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00790,RefSeq:WP_000358009.1,SO:0001217,UniParc:UPI00003B185E,UniRef:UniRef100_Q6GEX5,UniRef:UniRef50_P33986,UniRef:UniRef90_Q6GEX5;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2113571	2113804	.	-	.	ID=GCA000160335_02084_gene;locus_tag=GCA000160335_02084;gene=ywzB
contig_1	Pyrodigal	CDS	2113571	2113804	.	-	0	ID=GCA000160335_02084;Name=DUF1146 domain-containing protein;locus_tag=GCA000160335_02084;product=DUF1146 domain-containing protein;gene=ywzB;Parent=GCA000160335_02084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4836,COG:S,RefSeq:WP_000384523.1,SO:0001217,UniParc:UPI00000545E8,UniRef:UniRef100_Q2FWF3,UniRef:UniRef50_Q2FWF3,UniRef:UniRef90_Q2FWF3
contig_1	Infernal	gene	2114301	2114523	.	-	.	ID=GCA000160335_02085_gene;locus_tag=GCA000160335_02085;gene=S35
contig_1	Infernal	ncRNA	2114301	2114523	1.5e-17	-	.	ID=GCA000160335_02085;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02085;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02085_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2114683	2115087	.	-	.	ID=GCA000160335_02086_gene;locus_tag=GCA000160335_02086;gene=atpC
contig_1	Pyrodigal	CDS	2114683	2115087	.	-	0	ID=GCA000160335_02086;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000160335_02086;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000160335_02086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_001094394.1,SO:0001217,UniParc:UPI00000545E9,UniRef:UniRef100_Q2FWF1,UniRef:UniRef50_Q8CNJ8,UniRef:UniRef90_Q2FWF1;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2115107	2116519	.	-	.	ID=GCA000160335_02087_gene;locus_tag=GCA000160335_02087;gene=atpD
contig_1	Pyrodigal	CDS	2115107	2116519	.	-	0	ID=GCA000160335_02087;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000160335_02087;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000160335_02087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_000511135.1,SO:0001217,UniParc:UPI00000545EA,UniRef:UniRef100_Q2FWF0,UniRef:UniRef50_P50002,UniRef:UniRef90_Q2FWF0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2116541	2117407	.	-	.	ID=GCA000160335_02088_gene;locus_tag=GCA000160335_02088;gene=atpG
contig_1	Pyrodigal	CDS	2116541	2117407	.	-	0	ID=GCA000160335_02088;Name=ATP synthase F1 subunit gamma;locus_tag=GCA000160335_02088;product=ATP synthase F1 subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000160335_02088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,RefSeq:WP_000157603.1,SO:0001217,UniParc:UPI00000D76D5,UniRef:UniRef100_Q5HE96,UniRef:UniRef50_Q49Z51,UniRef:UniRef90_Q5HE96;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2117438	2118946	.	-	.	ID=GCA000160335_02089_gene;locus_tag=GCA000160335_02089;gene=atpA
contig_1	Pyrodigal	CDS	2117438	2118946	.	-	0	ID=GCA000160335_02089;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000160335_02089;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000160335_02089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_000974881.1,SO:0001217,UniParc:UPI00000545EC,UniRef:UniRef100_Q2FWE8,UniRef:UniRef50_P26679,UniRef:UniRef90_Q2FWE8;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2118968	2119507	.	-	.	ID=GCA000160335_02090_gene;locus_tag=GCA000160335_02090;gene=atpH
contig_1	Pyrodigal	CDS	2118968	2119507	.	-	0	ID=GCA000160335_02090;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA000160335_02090;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0005886,GO:0045261,GO:0046933;gene=atpH;Parent=GCA000160335_02090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_000241346.1,SO:0001217,UniParc:UPI00003B185F,UniRef:UniRef100_Q6GEW9,UniRef:UniRef50_Q2FWE7,UniRef:UniRef90_Q2FWE7;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2119507	2120028	.	-	.	ID=GCA000160335_02091_gene;locus_tag=GCA000160335_02091;gene=atpF
contig_1	Pyrodigal	CDS	2119507	2120028	.	-	0	ID=GCA000160335_02091;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000160335_02091;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0045263,GO:0046933,GO:0046961;gene=atpF;Parent=GCA000160335_02091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_000140679.1,SO:0001217,UniParc:UPI00000D78AB,UniRef:UniRef100_Q2G2F8,UniRef:UniRef50_Q49Z54,UniRef:UniRef90_Q6GEW8
contig_1	Pyrodigal	gene	2120227	2120439	.	-	.	ID=GCA000160335_02092_gene;locus_tag=GCA000160335_02092;gene=atpE
contig_1	Pyrodigal	CDS	2120227	2120439	.	-	0	ID=GCA000160335_02092;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000160335_02092;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000160335_02092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_001048816.1,SO:0001217,UniParc:UPI00000545F0,UniRef:UniRef100_Q2G2F6,UniRef:UniRef50_P37815,UniRef:UniRef90_Q2G2F6;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2120482	2121210	.	-	.	ID=GCA000160335_02093_gene;locus_tag=GCA000160335_02093;gene=atpB
contig_1	Pyrodigal	CDS	2120482	2121210	.	-	0	ID=GCA000160335_02093;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000160335_02093;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000160335_02093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_000349655.1,SO:0001217,UniParc:UPI00000545F1,UniRef:UniRef100_Q2G2F4,UniRef:UniRef50_Q2G2F4,UniRef:UniRef90_Q2G2F4;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2121231	2121584	.	-	.	ID=GCA000160335_02094_gene;locus_tag=GCA000160335_02094
contig_1	Pyrodigal	CDS	2121231	2121584	.	-	0	ID=GCA000160335_02094;Name=ATP synthase F0%2C I subunit;locus_tag=GCA000160335_02094;product=ATP synthase F0%2C I subunit;Parent=GCA000160335_02094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1861,UniRef:UniRef100_A0A0E1XAP5,UniRef:UniRef50_A0A0U1MR76,UniRef:UniRef90_A0A0U1MR76
contig_1	Pyrodigal	gene	2121747	2122877	.	-	.	ID=GCA000160335_02095_gene;locus_tag=GCA000160335_02095;gene=wecB
contig_1	Pyrodigal	CDS	2121747	2122877	.	-	0	ID=GCA000160335_02095;Name=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;locus_tag=GCA000160335_02095;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;Dbxref=GO:0008761;gene=wecB;Parent=GCA000160335_02095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0381,COG:M,KEGG:K01791,RefSeq:WP_000723407.1,SO:0001217,UniParc:UPI00019CD748,UniRef:UniRef100_A0A7U7EVV1,UniRef:UniRef50_A0A2Y8PHC9,UniRef:UniRef90_A0A2Y8PHC9;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	2122901	2123530	.	-	.	ID=GCA000160335_02096_gene;locus_tag=GCA000160335_02096;gene=upp
contig_1	Pyrodigal	CDS	2122901	2123530	.	-	0	ID=GCA000160335_02096;Name=uracil phosphoribosyltransferase;locus_tag=GCA000160335_02096;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000160335_02096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_000048712.1,SO:0001217,UniParc:UPI00000545F4,UniRef:UniRef100_Q2FWE6,UniRef:UniRef50_Q9RU32,UniRef:UniRef90_Q2FWE6;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	2123558	2124796	.	-	.	ID=GCA000160335_02097_gene;locus_tag=GCA000160335_02097;gene=glyA
contig_1	Pyrodigal	CDS	2123558	2124796	.	-	0	ID=GCA000160335_02097;Name=Serine hydroxymethyltransferase;locus_tag=GCA000160335_02097;product=Serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005829,GO:0019264,GO:0030170,GO:0035999;gene=glyA;Parent=GCA000160335_02097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_000120494.1,SO:0001217,UniParc:UPI00000545F5,UniRef:UniRef100_Q2FWE5,UniRef:UniRef50_Q2FWE5,UniRef:UniRef90_Q2FWE5;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	2124823	2125347	.	-	.	ID=GCA000160335_02098_gene;locus_tag=GCA000160335_02098;gene=ywlG
contig_1	Pyrodigal	CDS	2124823	2125347	.	-	0	ID=GCA000160335_02098;Name=UPF0340 protein SAR2202;locus_tag=GCA000160335_02098;product=UPF0340 protein SAR2202;gene=ywlG;Parent=GCA000160335_02098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4475,COG:S,RefSeq:WP_000654191.1,SO:0001217,UniParc:UPI00003B1863,UniRef:UniRef100_Q6GEW1,UniRef:UniRef50_Q2FWE4,UniRef:UniRef90_Q2FWE4
contig_1	Pyrodigal	gene	2125454	2125873	.	-	.	ID=GCA000160335_02099_gene;locus_tag=GCA000160335_02099;gene=ptpB
contig_1	Pyrodigal	CDS	2125454	2125873	.	-	0	ID=GCA000160335_02099;Name=Low molecular weight protein-tyrosine-phosphatase PtpB;locus_tag=GCA000160335_02099;product=Low molecular weight protein-tyrosine-phosphatase PtpB;Dbxref=GO:0004726,GO:0030946,GO:0140793;gene=ptpB;Parent=GCA000160335_02099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000697334.1,SO:0001217,UniParc:UPI000004740C,UniRef:UniRef100_Q2FWE3,UniRef:UniRef50_Q2FWE3,UniRef:UniRef90_Q2FWE3;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2125870	2126916	.	-	.	ID=GCA000160335_02100_gene;locus_tag=GCA000160335_02100;gene=tsaC
contig_1	Pyrodigal	CDS	2125870	2126916	.	-	0	ID=GCA000160335_02100;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000160335_02100;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000160335_02100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_000379892.1,SO:0001217,UniParc:UPI00003B1864,UniRef:UniRef100_A0A7Z7W3I1,UniRef:UniRef50_A0A6K1LH12,UniRef:UniRef90_A0A6K1LH12;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	2127000	2127836	.	-	.	ID=GCA000160335_02101_gene;locus_tag=GCA000160335_02101;gene=prmC
contig_1	Pyrodigal	CDS	2127000	2127836	.	-	0	ID=GCA000160335_02101;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000160335_02101;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000160335_02101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,RefSeq:WP_000248730.1,SO:0001217,UniParc:UPI00003B1865,UniRef:UniRef100_A0A7Z7R020,UniRef:UniRef50_Q2FWE1,UniRef:UniRef90_Q2FWE1;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	2127823	2128899	.	-	.	ID=GCA000160335_02102_gene;locus_tag=GCA000160335_02102;gene=prfA
contig_1	Pyrodigal	CDS	2127823	2128899	.	-	0	ID=GCA000160335_02102;Name=peptide chain release factor 1;locus_tag=GCA000160335_02102;product=peptide chain release factor 1;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000160335_02102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,RefSeq:WP_000460244.1,SO:0001217,UniParc:UPI00003B1866,UniRef:UniRef100_Q6GEV7,UniRef:UniRef50_B9DS45,UniRef:UniRef90_Q2FWE0
contig_1	Pyrodigal	gene	2128900	2129499	.	-	.	ID=GCA000160335_02103_gene;locus_tag=GCA000160335_02103;gene=tdk
contig_1	Pyrodigal	CDS	2128900	2129499	.	-	0	ID=GCA000160335_02103;Name=thymidine kinase;locus_tag=GCA000160335_02103;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897;gene=tdk;Parent=GCA000160335_02103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,RefSeq:WP_000273356.1,SO:0001217,UniParc:UPI00000D9F35,UniRef:UniRef100_Q2FF09,UniRef:UniRef50_Q5KUH1,UniRef:UniRef90_Q2FF09;ec_number=2.7.1.21
contig_1	Pyrodigal	gene	2129846	2130100	.	-	.	ID=GCA000160335_02104_gene;locus_tag=GCA000160335_02104;gene=rpmE2
contig_1	Pyrodigal	CDS	2129846	2130100	.	-	0	ID=GCA000160335_02104;Name=type B 50S ribosomal protein L31;locus_tag=GCA000160335_02104;product=type B 50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmE2;Parent=GCA000160335_02104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_000808968.1,SO:0001217,UniParc:UPI00000545FB,UniRef:UniRef100_Q2FWD8,UniRef:UniRef50_Q5HMA2,UniRef:UniRef90_Q5HMA2
contig_1	Pyrodigal	gene	2130218	2131534	.	-	.	ID=GCA000160335_02105_gene;locus_tag=GCA000160335_02105;gene=rho
contig_1	Pyrodigal	CDS	2130218	2131534	.	-	0	ID=GCA000160335_02105;Name=transcription termination factor Rho;locus_tag=GCA000160335_02105;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0005524,GO:0006353,GO:0008186;gene=rho;Parent=GCA000160335_02105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,KEGG:K03628,RefSeq:WP_001115101.1,SO:0001217,UniParc:UPI00000D7733,UniRef:UniRef100_A0A133PU93,UniRef:UniRef50_A0A2D6ZY33,UniRef:UniRef90_A0A133PU93;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	2131781	2133208	.	-	.	ID=GCA000160335_02106_gene;locus_tag=GCA000160335_02106;gene=adhE
contig_1	Pyrodigal	CDS	2131781	2133208	.	-	0	ID=GCA000160335_02106;Name=Putative aldehyde dehydrogenase;locus_tag=GCA000160335_02106;product=Putative aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0006081;gene=adhE;Parent=GCA000160335_02106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001206107.1,SO:0001217,UniParc:UPI00003B1867,UniRef:UniRef100_Q6GEV3,UniRef:UniRef50_Q4L803,UniRef:UniRef90_Q2FWD6;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	2133446	2133781	.	-	.	ID=GCA000160335_02107_gene;locus_tag=GCA000160335_02107;gene=hxlR
contig_1	Pyrodigal	CDS	2133446	2133781	.	-	0	ID=GCA000160335_02107;Name=HTH hxlR-type domain-containing protein;locus_tag=GCA000160335_02107;product=HTH hxlR-type domain-containing protein;gene=hxlR;Parent=GCA000160335_02107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1733,COG:K,RefSeq:WP_000451438.1,SO:0001217,UniParc:UPI00004B5C7F,UniRef:UniRef100_A0AA43V3D6,UniRef:UniRef50_B9DMD6,UniRef:UniRef90_A0A7U7PWB3
contig_1	Pyrodigal	gene	2133870	2135129	.	-	.	ID=GCA000160335_02108_gene;locus_tag=GCA000160335_02108;gene=murA2
contig_1	Pyrodigal	CDS	2133870	2135129	.	-	0	ID=GCA000160335_02108;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000160335_02108;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA2;Parent=GCA000160335_02108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_000046606.1,SO:0001217,UniParc:UPI00003B1868,UniRef:UniRef100_Q6GEV1,UniRef:UniRef50_P19670,UniRef:UniRef90_Q6GEV1;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2135595	2136455	.	-	.	ID=GCA000160335_02109_gene;locus_tag=GCA000160335_02109;gene=fba
contig_1	Pyrodigal	CDS	2135595	2136455	.	-	0	ID=GCA000160335_02109;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000160335_02109;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096,GO:0008270,GO:0030388;gene=fba;Parent=GCA000160335_02109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_001131841.1,SO:0001217,UniParc:UPI00000D7773,UniRef:UniRef100_Q5HE75,UniRef:UniRef50_P94453,UniRef:UniRef90_Q5HM97;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2136673	2137194	.	+	.	ID=GCA000160335_02110_gene;locus_tag=GCA000160335_02110
contig_1	Pyrodigal	CDS	2136673	2137194	.	+	0	ID=GCA000160335_02110;Name=DUF2529 domain-containing protein;locus_tag=GCA000160335_02110;product=DUF2529 domain-containing protein;Parent=GCA000160335_02110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000035000.1,SO:0001217,UniParc:UPI00003B1869,UniRef:UniRef100_A0A7Z7R0X3,UniRef:UniRef50_Q2FWD2,UniRef:UniRef90_Q2FWD2
contig_1	Pyrodigal	gene	2137303	2138913	.	-	.	ID=GCA000160335_02111_gene;locus_tag=GCA000160335_02111;gene=pyrG
contig_1	Pyrodigal	CDS	2137303	2138913	.	-	0	ID=GCA000160335_02111;Name=CTP synthase;locus_tag=GCA000160335_02111;product=CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0006241,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000160335_02111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,RefSeq:WP_000159960.1,SO:0001217,UniParc:UPI0000132D80,UniRef:UniRef100_Q2FF01,UniRef:UniRef50_Q8Y495,UniRef:UniRef90_Q2FWD1;ec_number=6.3.4.2
contig_1	Infernal	gene	2139132	2139201	.	-	.	ID=GCA000160335_02112_gene;locus_tag=GCA000160335_02112;gene=tsr31
contig_1	Infernal	ncRNA	2139132	2139201	6.5e-16	-	.	ID=GCA000160335_02112;Name=S. aureus tsr31 small RNA;locus_tag=GCA000160335_02112;product=S. aureus tsr31 small RNA;Dbxref=RFAM:RF02580;Parent=GCA000160335_02112_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02580
contig_1	Pyrodigal	gene	2139249	2139779	.	-	.	ID=GCA000160335_02113_gene;locus_tag=GCA000160335_02113;gene=rpoE
contig_1	Pyrodigal	CDS	2139249	2139779	.	-	0	ID=GCA000160335_02113;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000160335_02113;product=DNA-directed RNA polymerase subunit delta;Dbxref=GO:0000428,GO:0003899,GO:0006351,GO:0006355;gene=rpoE;Parent=GCA000160335_02113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3343,COG:K,KEGG:K03048,RefSeq:WP_000701483.1,SO:0001217,UniParc:UPI0000054604,UniRef:UniRef100_Q2FWD0,UniRef:UniRef50_Q2FWD0,UniRef:UniRef90_Q2FWD0;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2139891	2140751	.	-	.	ID=GCA000160335_02114_gene;locus_tag=GCA000160335_02114;gene=rimL
contig_1	Pyrodigal	CDS	2139891	2140751	.	-	0	ID=GCA000160335_02114;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02114;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000160335_02114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_001040736.1,SO:0001217,UniParc:UPI0000054605,UniRef:UniRef100_Q2FWC9,UniRef:UniRef50_Q2FWC9,UniRef:UniRef90_Q2FWC9
contig_1	Pyrodigal	gene	2141175	2141978	.	+	.	ID=GCA000160335_02115_gene;locus_tag=GCA000160335_02115;gene=coaW
contig_1	Pyrodigal	CDS	2141175	2141978	.	+	0	ID=GCA000160335_02115;Name=type II pantothenate kinase;locus_tag=GCA000160335_02115;product=type II pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005829,GO:0015937;gene=coaW;Parent=GCA000160335_02115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5146,COG:H,RefSeq:WP_000862735.1,SO:0001217,UniParc:UPI0001B70161,UniRef:UniRef100_UPI0001B70161,UniRef:UniRef50_Q2FWC7,UniRef:UniRef90_Q2FWC7;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	2142104	2142775	.	-	.	ID=GCA000160335_02116_gene;locus_tag=GCA000160335_02116
contig_1	Pyrodigal	CDS	2142104	2142775	.	-	0	ID=GCA000160335_02116;Name=DUF2750 domain-containing protein;locus_tag=GCA000160335_02116;product=DUF2750 domain-containing protein;Parent=GCA000160335_02116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120549.1,SO:0001217,UniParc:UPI0000054607,UniRef:UniRef100_Q2FWC6,UniRef:UniRef50_Q2FWC6,UniRef:UniRef90_Q2FWC6
contig_1	Pyrodigal	gene	2143174	2144367	.	-	.	ID=GCA000160335_02117_gene;locus_tag=GCA000160335_02117;gene=accC
contig_1	Pyrodigal	CDS	2143174	2144367	.	-	0	ID=GCA000160335_02117;Name=L-aspartate--L-methionine ligase;locus_tag=GCA000160335_02117;product=L-aspartate--L-methionine ligase;Dbxref=GO:0000096,GO:0000287,GO:0005524,GO:0006555,GO:0016881,GO:0034026,GO:0042802,GO:0042803,GO:1901605;gene=accC;Parent=GCA000160335_02117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,KEGG:K27344,RefSeq:WP_000183722.1,SO:0001217,UniParc:UPI00003B186A,UniRef:UniRef100_A0A7Z7R032,UniRef:UniRef50_Q2FWC5,UniRef:UniRef90_Q2FWC5;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	2144367	2145551	.	-	.	ID=GCA000160335_02118_gene;locus_tag=GCA000160335_02118;gene=abgB
contig_1	Pyrodigal	CDS	2144367	2145551	.	-	0	ID=GCA000160335_02118;Name=Peptidase M20 domain-containing protein 2;locus_tag=GCA000160335_02118;product=Peptidase M20 domain-containing protein 2;gene=abgB;Parent=GCA000160335_02118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001291490.1,SO:0001217,UniParc:UPI00003B186B,UniRef:UniRef100_A0A7Z7R0M6,UniRef:UniRef50_Q79EU8,UniRef:UniRef90_Q79EU8
contig_1	Pyrodigal	gene	2145861	2146331	.	+	.	ID=GCA000160335_02119_gene;locus_tag=GCA000160335_02119;gene=luxS
contig_1	Pyrodigal	CDS	2145861	2146331	.	+	0	ID=GCA000160335_02119;Name=S-ribosylhomocysteine lyase;locus_tag=GCA000160335_02119;product=S-ribosylhomocysteine lyase;Dbxref=GO:0005506,GO:0009372,GO:0043768;gene=luxS;Parent=GCA000160335_02119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,KEGG:K07173,RefSeq:WP_000164421.1,SO:0001217,UniParc:UPI0000054609,UniRef:UniRef100_Q2FWC3,UniRef:UniRef50_Q9ZMW8,UniRef:UniRef90_Q2FWC3;ec_number=4.4.1.21
contig_1	Pyrodigal	gene	2146483	2146833	.	-	.	ID=GCA000160335_02120_gene;locus_tag=GCA000160335_02120;gene=doxX
contig_1	Pyrodigal	CDS	2146483	2146833	.	-	0	ID=GCA000160335_02120;Name=DoxX family membrane protein;locus_tag=GCA000160335_02120;product=DoxX family membrane protein;gene=doxX;Parent=GCA000160335_02120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4270,COG:R,RefSeq:WP_001024028.1,SO:0001217,UniParc:UPI00003B186C,UniRef:UniRef100_A0A7Z7QZY8,UniRef:UniRef50_B9DJX6,UniRef:UniRef90_Q2FWC2
contig_1	Pyrodigal	gene	2146847	2148148	.	-	.	ID=GCA000160335_02121_gene;locus_tag=GCA000160335_02121;gene=pdp
contig_1	Pyrodigal	CDS	2146847	2148148	.	-	0	ID=GCA000160335_02121;Name=pyrimidine-nucleoside phosphorylase;locus_tag=GCA000160335_02121;product=pyrimidine-nucleoside phosphorylase;Dbxref=GO:0004645,GO:0004850,GO:0005829,GO:0006206,GO:0006213,GO:0009032,GO:0016154,GO:0046872,GO:0047847;gene=pdp;Parent=GCA000160335_02121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0213,COG:F,KEGG:K04047,RefSeq:WP_001242307.1,SO:0001217,UniParc:UPI00021AE5F8,UniRef:UniRef100_A0A7Z7R010,UniRef:UniRef50_Q99SC3,UniRef:UniRef90_Q99SC3;ec_number=2.4.2.2
contig_1	Pyrodigal	gene	2148428	2149090	.	-	.	ID=GCA000160335_02122_gene;locus_tag=GCA000160335_02122;gene=deoC
contig_1	Pyrodigal	CDS	2148428	2149090	.	-	0	ID=GCA000160335_02122;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000160335_02122;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000160335_02122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001083335.1,SO:0001217,UniParc:UPI00003B186E,UniRef:UniRef100_Q6GET8,UniRef:UniRef50_Q6GET8,UniRef:UniRef90_Q6GET8;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	2149405	2150115	.	+	.	ID=GCA000160335_02123_gene;locus_tag=GCA000160335_02123;gene=deoD
contig_1	Pyrodigal	CDS	2149405	2150115	.	+	0	ID=GCA000160335_02123;Name=purine-nucleoside phosphorylase;locus_tag=GCA000160335_02123;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000160335_02123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000160304.1,SO:0001217,UniParc:UPI000005460E,UniRef:UniRef100_Q2FWB8,UniRef:UniRef50_A0A1C5V1M1,UniRef:UniRef90_A0A2K4AEZ2;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2150236	2150679	.	-	.	ID=GCA000160335_02124_gene;locus_tag=GCA000160335_02124;gene=dps
contig_1	Pyrodigal	CDS	2150236	2150679	.	-	0	ID=GCA000160335_02124;Name=DNA starvation/stationary phase protection protein;locus_tag=GCA000160335_02124;product=DNA starvation/stationary phase protection protein;gene=dps;Parent=GCA000160335_02124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_000070866.1,SO:0001217,UniParc:UPI000005460F,UniRef:UniRef100_Q2FWB7,UniRef:UniRef50_A0A9Q9F1A2,UniRef:UniRef90_A0A2K4AF10
contig_1	Pyrodigal	gene	2150879	2151292	.	-	.	ID=GCA000160335_02125_gene;locus_tag=GCA000160335_02125;gene=yuxK
contig_1	Pyrodigal	CDS	2150879	2151292	.	-	0	ID=GCA000160335_02125;Name=DUF393 domain-containing protein;locus_tag=GCA000160335_02125;product=DUF393 domain-containing protein;gene=yuxK;Parent=GCA000160335_02125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3011,COG:R,RefSeq:WP_001123310.1,SO:0001217,UniParc:UPI00003B186F,UniRef:UniRef100_A0A7Z7R105,UniRef:UniRef50_Q2FWB6,UniRef:UniRef90_Q2FWB6
contig_1	Pyrodigal	gene	2151741	2153114	.	-	.	ID=GCA000160335_02126_gene;locus_tag=GCA000160335_02126;gene=eVE
contig_1	Pyrodigal	CDS	2151741	2153114	.	-	0	ID=GCA000160335_02126;Name=EVE domain-containing protein;locus_tag=GCA000160335_02126;product=EVE domain-containing protein;gene=eVE;Parent=GCA000160335_02126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2947,COG:R,RefSeq:WP_000123402.1,SO:0001217,UniParc:UPI00000D9F3A,UniRef:UniRef100_A0A7Z7R0Y7,UniRef:UniRef50_Q49Z89,UniRef:UniRef90_Q2FWB5
contig_1	Pyrodigal	gene	2153787	2154017	.	-	.	ID=GCA000160335_02127_gene;locus_tag=GCA000160335_02127
contig_1	Pyrodigal	CDS	2153787	2154017	.	-	0	ID=GCA000160335_02127;Name=Integral membrane protein;locus_tag=GCA000160335_02127;product=Integral membrane protein;Parent=GCA000160335_02127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000808817.1,SO:0001217,UniParc:UPI00000D76A1,UniRef:UniRef100_Q2FWB4,UniRef:UniRef50_Q2FWB4,UniRef:UniRef90_Q2FWB4
contig_1	Pyrodigal	gene	2154048	2154986	.	-	.	ID=GCA000160335_02128_gene;locus_tag=GCA000160335_02128;gene=manA
contig_1	Pyrodigal	CDS	2154048	2154986	.	-	0	ID=GCA000160335_02128;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000160335_02128;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000160335_02128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001127959.1,SO:0001217,UniParc:UPI00003B1870,UniRef:UniRef100_A0A0E1XIN3,UniRef:UniRef50_A0A0A8HNJ1,UniRef:UniRef90_A0A0E1XIN3;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2155422	2156087	.	-	.	ID=GCA000160335_02129_gene;locus_tag=GCA000160335_02129;gene=ybjT
contig_1	Pyrodigal	CDS	2155422	2156087	.	-	0	ID=GCA000160335_02129;Name=putative sugar epimerase YhfK;locus_tag=GCA000160335_02129;product=putative sugar epimerase YhfK;gene=ybjT;Parent=GCA000160335_02129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024099.1,SO:0001217,UniParc:UPI00003B1871,UniRef:UniRef100_A0A7Z7W2P1,UniRef:UniRef50_A0A1W7A9I9,UniRef:UniRef90_A0A7U7JQM2
contig_1	Pyrodigal	gene	2156239	2156559	.	+	.	ID=GCA000160335_02130_gene;locus_tag=GCA000160335_02130;gene=czrA
contig_1	Pyrodigal	CDS	2156239	2156559	.	+	0	ID=GCA000160335_02130;Name=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;locus_tag=GCA000160335_02130;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;gene=czrA;Parent=GCA000160335_02130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000003759,BlastRules:WP_002499956,BlastRules:WP_003231284,COG:COG0640,COG:K,RefSeq:WP_000003759.1,SO:0001217,UniParc:UPI0000054616,UniRef:UniRef100_Q2FWB0,UniRef:UniRef50_Q2FWB0,UniRef:UniRef90_Q2FWB0
contig_1	Pyrodigal	gene	2156561	2157541	.	+	.	ID=GCA000160335_02131_gene;locus_tag=GCA000160335_02131;gene=czrB
contig_1	Pyrodigal	CDS	2156561	2157541	.	+	0	ID=GCA000160335_02131;Name=CDF family zinc efflux transporter CzrB;locus_tag=GCA000160335_02131;product=CDF family zinc efflux transporter CzrB;gene=czrB;Parent=GCA000160335_02131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_128146008,COG:COG1230,COG:P,RefSeq:WP_000019741.1,SO:0001217,UniParc:UPI00003B1872,UniRef:UniRef100_A0A7Z7W3J2,UniRef:UniRef50_A0A7U7JQM3,UniRef:UniRef90_A0A7U7JQM3
contig_1	Pyrodigal	gene	2157807	2158898	.	+	.	ID=GCA000160335_02132_gene;locus_tag=GCA000160335_02132
contig_1	Pyrodigal	CDS	2157807	2158898	.	+	0	ID=GCA000160335_02132;Name=Transcriptional regulator;locus_tag=GCA000160335_02132;product=Transcriptional regulator;Parent=GCA000160335_02132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495684.1,SO:0001217,UniParc:UPI00003B1873,UniRef:UniRef100_A0AAJ4YXY4,UniRef:UniRef50_A0A0E1X8C7,UniRef:UniRef90_A0A0E1X8C7
contig_1	Bakta	gene	2159340	2159420	.	-	.	ID=GCA000160335_02133_gene;locus_tag=GCA000160335_02133;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2159340	2159420	.	-	0	ID=GCA000160335_02133;Name=Holin-like toxin;locus_tag=GCA000160335_02133;product=Holin-like toxin;Parent=GCA000160335_02133_gene;Note=SO:0001217,UniParc:UPI00003B1874,UniRef:UniRef100_A0A7U7EW85,UniRef:UniRef50_A0A7U7EW85,UniRef:UniRef90_A0A7U7EW85
contig_1	Infernal	gene	2159347	2159527	.	-	.	ID=GCA000160335_02134_gene;locus_tag=GCA000160335_02134;gene=rli28
contig_1	Infernal	ncRNA	2159347	2159527	3.1e-17	-	.	ID=GCA000160335_02134;Name=Listeria sRNA rli28;locus_tag=GCA000160335_02134;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000160335_02134_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	2160941	2161798	.	-	.	ID=GCA000160335_02135_gene;locus_tag=GCA000160335_02135;gene=cof
contig_1	Pyrodigal	CDS	2160941	2161798	.	-	0	ID=GCA000160335_02135;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000160335_02135;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000160335_02135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000370937.1,SO:0001217,UniParc:UPI00003B1875,UniRef:UniRef100_A0A0E1X9Z2,UniRef:UniRef50_Q2FWA2,UniRef:UniRef90_Q2FWA2
contig_1	Pyrodigal	gene	2161866	2162648	.	-	.	ID=GCA000160335_02136_gene;locus_tag=GCA000160335_02136;gene=modF
contig_1	Pyrodigal	CDS	2161866	2162648	.	-	0	ID=GCA000160335_02136;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000160335_02136;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=modF;Parent=GCA000160335_02136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1119,COG:P,RefSeq:WP_000908186.1,SO:0001217,UniParc:UPI00003B1876,UniRef:UniRef100_A0A7Z7R002,UniRef:UniRef50_Q4L835,UniRef:UniRef90_A0A391EDP6
contig_1	Pyrodigal	gene	2162880	2164685	.	-	.	ID=GCA000160335_02137_gene;locus_tag=GCA000160335_02137;gene=glmS
contig_1	Pyrodigal	CDS	2162880	2164685	.	-	0	ID=GCA000160335_02137;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000160335_02137;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000160335_02137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0449,COG:M,KEGG:K00820,RefSeq:WP_000334466.1,SO:0001217,UniParc:UPI00003B1877,UniRef:UniRef100_Q6GES3,UniRef:UniRef50_Q88YE7,UniRef:UniRef90_Q6GES3;ec_number=2.6.1.16
contig_1	Infernal	regulatory_region	2164887	2165103	1.4e-18	-	.	ID=HBCHLJIIAO_150;Name=glmS glucosamine-6-phosphate activated ribozyme aptamer;product=glmS glucosamine-6-phosphate activated ribozyme aptamer;Dbxref=RFAM:RF00234;inference=profile:Rfam:RF00234;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2165366	2166904	.	+	.	ID=GCA000160335_02138_gene;locus_tag=GCA000160335_02138;gene=mtlA
contig_1	Pyrodigal	CDS	2165366	2166904	.	+	0	ID=GCA000160335_02138;Name=PTS system mannitol-specific EIICB component;locus_tag=GCA000160335_02138;product=PTS system mannitol-specific EIICB component;Dbxref=GO:0005886,GO:0009401,GO:0016301,GO:0022872,GO:0090563;gene=mtlA;Parent=GCA000160335_02138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2213,COG:G,KEGG:K02800,RefSeq:WP_000083795.1,SO:0001217,UniParc:UPI00003B1879,UniRef:UniRef100_Q6GES1,UniRef:UniRef50_P28008,UniRef:UniRef90_Q99SA3;ec_number=2.7.1.197
contig_1	Pyrodigal	gene	2166939	2169071	.	+	.	ID=GCA000160335_02139_gene;locus_tag=GCA000160335_02139;gene=bglG
contig_1	Pyrodigal	CDS	2166939	2169071	.	+	0	ID=GCA000160335_02139;Name=BglG family transcription antiterminator;locus_tag=GCA000160335_02139;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000160335_02139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03483,RefSeq:WP_000927367.1,SO:0001217,UniParc:UPI00003B187A,UniRef:UniRef100_A0A0E1X9Y6,UniRef:UniRef50_A0A0D6H7E9,UniRef:UniRef90_A0A0D6H7E9
contig_1	Pyrodigal	gene	2169083	2169517	.	+	.	ID=GCA000160335_02140_gene;locus_tag=GCA000160335_02140;gene=mtlF
contig_1	Pyrodigal	CDS	2169083	2169517	.	+	0	ID=GCA000160335_02140;Name=Mannitol-specific phosphotransferase enzyme IIA component;locus_tag=GCA000160335_02140;product=Mannitol-specific phosphotransferase enzyme IIA component;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0090563;gene=mtlF;Parent=GCA000160335_02140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,RefSeq:WP_001292150.1,SO:0001217,UniParc:UPI00003B187B,UniRef:UniRef100_Q6GER9,UniRef:UniRef50_P17876,UniRef:UniRef90_Q5HE46
contig_1	Pyrodigal	gene	2169517	2170623	.	+	.	ID=GCA000160335_02141_gene;locus_tag=GCA000160335_02141;gene=mtlD
contig_1	Pyrodigal	CDS	2169517	2170623	.	+	0	ID=GCA000160335_02141;Name=mannitol-1-phosphate 5-dehydrogenase;locus_tag=GCA000160335_02141;product=mannitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0005829,GO:0008926,GO:0019592;gene=mtlD;Parent=GCA000160335_02141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0246,COG:G,KEGG:K00009,RefSeq:WP_000648736.1,SO:0001217,UniParc:UPI00003B187C,UniRef:UniRef100_Q6GER8,UniRef:UniRef50_Q2FW96,UniRef:UniRef90_Q2FW96;ec_number=1.1.1.17
contig_1	Pyrodigal	gene	2170942	2177619	.	-	.	ID=GCA000160335_02142_gene;locus_tag=GCA000160335_02142
contig_1	Pyrodigal	CDS	2170942	2177619	.	-	0	ID=GCA000160335_02142;Name=DUF1542 domain-containing protein;locus_tag=GCA000160335_02142;product=DUF1542 domain-containing protein;Parent=GCA000160335_02142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B7017F,UniRef:UniRef100_A0A7Z7R0Z2,UniRef:UniRef50_Q2FW95,UniRef:UniRef90_Q2FW95
contig_1	Pyrodigal	gene	2178214	2178336	.	-	.	ID=GCA000160335_02143_gene;locus_tag=GCA000160335_02143
contig_1	Pyrodigal	CDS	2178214	2178336	.	-	0	ID=GCA000160335_02143;Name=DUF1542 domain-containing protein;locus_tag=GCA000160335_02143;product=DUF1542 domain-containing protein;Parent=GCA000160335_02143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001048230.1,SO:0001217,UniParc:UPI00019CD69C,UniRef:UniRef100_A0A7Z7W2B3,UniRef:UniRef50_Q2FW95,UniRef:UniRef90_Q2FW95
contig_1	Pyrodigal	gene	2178619	2179974	.	-	.	ID=GCA000160335_02144_gene;locus_tag=GCA000160335_02144;gene=glmM
contig_1	Pyrodigal	CDS	2178619	2179974	.	-	0	ID=GCA000160335_02144;Name=phosphoglucosamine mutase;locus_tag=GCA000160335_02144;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252;gene=glmM;Parent=GCA000160335_02144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_000521495.1,SO:0001217,UniParc:UPI00000D77E8,UniRef:UniRef100_P65704,UniRef:UniRef50_P0C0V7,UniRef:UniRef90_P0C0V7;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	2180001	2180933	.	-	.	ID=GCA000160335_02145_gene;locus_tag=GCA000160335_02145;gene=ybbR
contig_1	Pyrodigal	CDS	2180001	2180933	.	-	0	ID=GCA000160335_02145;Name=YbbR-like domain-containing protein;locus_tag=GCA000160335_02145;product=YbbR-like domain-containing protein;gene=ybbR;Parent=GCA000160335_02145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4856,COG:T,RefSeq:WP_000894028.1,SO:0001217,UniParc:UPI00003B187D,UniRef:UniRef100_A0A7Z7W2P5,UniRef:UniRef50_A0A2T4S925,UniRef:UniRef90_Q2FW93
contig_1	Pyrodigal	gene	2180935	2181744	.	-	.	ID=GCA000160335_02146_gene;locus_tag=GCA000160335_02146;gene=cdaA
contig_1	Pyrodigal	CDS	2180935	2181744	.	-	0	ID=GCA000160335_02146;Name=diadenylate cyclase CdaA;locus_tag=GCA000160335_02146;product=diadenylate cyclase CdaA;Dbxref=GO:0004016,GO:0006171;gene=cdaA;Parent=GCA000160335_02146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1642,COG:T,KEGG:K18672,RefSeq:WP_000347893.1,SO:0001217,UniParc:UPI0001B70180,UniRef:UniRef100_UPI0001B70180,UniRef:UniRef50_A0A223KXB4,UniRef:UniRef90_A0A898CM21;ec_number=2.7.7.85
contig_1	Pyrodigal	gene	2181934	2182842	.	-	.	ID=GCA000160335_02147_gene;locus_tag=GCA000160335_02147;gene=rocF
contig_1	Pyrodigal	CDS	2181934	2182842	.	-	0	ID=GCA000160335_02147;Name=arginase;locus_tag=GCA000160335_02147;product=arginase;Dbxref=GO:0000050,GO:0004053,GO:0005737,GO:0019547,GO:0030145,GO:0046872;gene=rocF;Parent=GCA000160335_02147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01476,RefSeq:WP_000162591.1,SO:0001217,UniParc:UPI00003B187E,UniRef:UniRef100_Q6GER3,UniRef:UniRef50_P60086,UniRef:UniRef90_P60086;ec_number=3.5.3.1
contig_1	tRNAscan-SE	gene	2182984	2183056	.	-	.	ID=GCA000160335_02148_gene;locus_tag=GCA000160335_02148;gene=trnK
contig_1	tRNAscan-SE	tRNA	2182984	2183056	.	-	.	ID=GCA000160335_02148;Name=tRNA-Lys(ttt);locus_tag=GCA000160335_02148;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000160335_02148_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	2183060	2183134	.	-	.	ID=GCA000160335_02149_gene;locus_tag=GCA000160335_02149;gene=trnQ
contig_1	tRNAscan-SE	tRNA	2183060	2183134	.	-	.	ID=GCA000160335_02149;Name=tRNA-Gln(ttg);locus_tag=GCA000160335_02149;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000160335_02149_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	2183144	2183227	.	-	.	ID=GCA000160335_02150_gene;locus_tag=GCA000160335_02150;gene=trnY
contig_1	tRNAscan-SE	tRNA	2183144	2183227	.	-	.	ID=GCA000160335_02150;Name=tRNA-Tyr(gta);locus_tag=GCA000160335_02150;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000160335_02150_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	2183256	2183331	.	-	.	ID=GCA000160335_02151_gene;locus_tag=GCA000160335_02151;gene=trnV
contig_1	tRNAscan-SE	tRNA	2183256	2183331	.	-	.	ID=GCA000160335_02151;Name=tRNA-Val(tac);locus_tag=GCA000160335_02151;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000160335_02151_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2183339	2183410	.	-	.	ID=GCA000160335_02152_gene;locus_tag=GCA000160335_02152;gene=trnE
contig_1	tRNAscan-SE	tRNA	2183339	2183410	.	-	.	ID=GCA000160335_02152;Name=tRNA-Glu(ttc);locus_tag=GCA000160335_02152;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000160335_02152_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	2183412	2183486	.	-	.	ID=GCA000160335_02153_gene;locus_tag=GCA000160335_02153;gene=trnN
contig_1	tRNAscan-SE	tRNA	2183412	2183486	.	-	.	ID=GCA000160335_02153;Name=tRNA-Asn(gtt);locus_tag=GCA000160335_02153;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000160335_02153_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Infernal	gene	2183498	2183612	.	-	.	ID=GCA000160335_02154_gene;locus_tag=GCA000160335_02154;gene=rrf
contig_1	Infernal	rRNA	2183498	2183612	1.1e-14	-	.	ID=GCA000160335_02154;Name=5S ribosomal RNA;locus_tag=GCA000160335_02154;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000160335_02154_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2183686	2186608	.	-	.	ID=GCA000160335_02155_gene;locus_tag=GCA000160335_02155;gene=rrl
contig_1	Infernal	rRNA	2183686	2186608	1.4e-06	-	.	ID=GCA000160335_02155;Name=23S ribosomal RNA;locus_tag=GCA000160335_02155;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000160335_02155_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2187050	2188601	.	-	.	ID=GCA000160335_02156_gene;locus_tag=GCA000160335_02156;gene=rrs
contig_1	Infernal	rRNA	2187050	2188601	1.3e-49	-	.	ID=GCA000160335_02156;Name=16S ribosomal RNA;locus_tag=GCA000160335_02156;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000160335_02156_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	2189059	2190123	.	-	.	ID=GCA000160335_02157_gene;locus_tag=GCA000160335_02157;gene=mrp
contig_1	Pyrodigal	CDS	2189059	2190123	.	-	0	ID=GCA000160335_02157;Name=Iron-sulfur cluster carrier protein;locus_tag=GCA000160335_02157;product=Iron-sulfur cluster carrier protein;gene=mrp;Parent=GCA000160335_02157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000958522.1,SO:0001217,UniParc:UPI00003B187F,UniRef:UniRef100_A0A7Z7R050,UniRef:UniRef50_P50863,UniRef:UniRef90_A0A7U7JQN2
contig_1	Pyrodigal	gene	2190271	2191713	.	-	.	ID=GCA000160335_02158_gene;locus_tag=GCA000160335_02158;gene=lmrS
contig_1	Pyrodigal	CDS	2190271	2191713	.	-	0	ID=GCA000160335_02158;Name=multidrug efflux MFS transporter LmrS;locus_tag=GCA000160335_02158;product=multidrug efflux MFS transporter LmrS;gene=lmrS;Parent=GCA000160335_02158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001140999,COG:COG2814,COG:G,KEGG:K18934,NCBIProtein:AAW38464.1,RefSeq:WP_001141016.1,SO:0001217,UniParc:UPI0002C988D7,UniRef:UniRef100_A0A7Z7R0P7,UniRef:UniRef50_Q2FW85,UniRef:UniRef90_Q2FW85
contig_1	Pyrodigal	gene	2191902	2192369	.	-	.	ID=GCA000160335_02159_gene;locus_tag=GCA000160335_02159;gene=sepA
contig_1	Pyrodigal	CDS	2191902	2192369	.	-	0	ID=GCA000160335_02159;Name=multidrug efflux transporter SepA;locus_tag=GCA000160335_02159;product=multidrug efflux transporter SepA;Dbxref=GO:0005886;gene=sepA;Parent=GCA000160335_02159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_011382353,SO:0001217,UniParc:UPI00003B1880,UniRef:UniRef100_Q6GER1,UniRef:UniRef50_Q5HM62,UniRef:UniRef90_Q2FW84
contig_1	Pyrodigal	gene	2192497	2193840	.	-	.	ID=GCA000160335_02160_gene;locus_tag=GCA000160335_02160;gene=sdrM
contig_1	Pyrodigal	CDS	2192497	2193840	.	-	0	ID=GCA000160335_02160;Name=multidrug efflux MFS transporter SdrM;locus_tag=GCA000160335_02160;product=multidrug efflux MFS transporter SdrM;gene=sdrM;Parent=GCA000160335_02160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18935,RefSeq:WP_001237527.1,SO:0001217,UniParc:UPI00003B1881,UniRef:UniRef100_A0A7Z7R012,UniRef:UniRef50_Q99S97,UniRef:UniRef90_A0A0U1MRS3
contig_1	Pyrodigal	gene	2194018	2194701	.	-	.	ID=GCA000160335_02161_gene;locus_tag=GCA000160335_02161;gene=yqfA
contig_1	Pyrodigal	CDS	2194018	2194701	.	-	0	ID=GCA000160335_02161;Name=Hemolysin III;locus_tag=GCA000160335_02161;product=Hemolysin III;gene=yqfA;Parent=GCA000160335_02161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1272,COG:U,RefSeq:WP_000047120.1,SO:0001217,UniParc:UPI00003B1882,UniRef:UniRef100_A0A7Z7R031,UniRef:UniRef50_Q2FW82,UniRef:UniRef90_Q2FW82
contig_1	Pyrodigal	gene	2194720	2195907	.	-	.	ID=GCA000160335_02162_gene;locus_tag=GCA000160335_02162;gene=qRI1
contig_1	Pyrodigal	CDS	2194720	2195907	.	-	0	ID=GCA000160335_02162;Name=putative uridylyltransferase MW2097;locus_tag=GCA000160335_02162;product=putative uridylyltransferase MW2097;Dbxref=GO:0070569;gene=qRI1;Parent=GCA000160335_02162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4284,COG:G,KEGG:K11442,RefSeq:WP_000884730.1,SO:0001217,UniParc:UPI00003B1883,UniRef:UniRef100_Q6GEQ8,UniRef:UniRef50_Q2FW81,UniRef:UniRef90_Q2FW81;ec_number=2.7.7.-
contig_1	Pyrodigal	gene	2195951	2196466	.	-	.	ID=GCA000160335_02163_gene;locus_tag=GCA000160335_02163;gene=ybcI
contig_1	Pyrodigal	CDS	2195951	2196466	.	-	0	ID=GCA000160335_02163;Name=Metal-dependent hydrolase;locus_tag=GCA000160335_02163;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000160335_02163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000147093.1,SO:0001217,UniParc:UPI00003B1884,UniRef:UniRef100_A0A7Z7R0Q7,UniRef:UniRef50_Q2FW80,UniRef:UniRef90_Q2FW80
contig_1	Pyrodigal	gene	2196643	2196903	.	+	.	ID=GCA000160335_02164_gene;locus_tag=GCA000160335_02164
contig_1	Pyrodigal	CDS	2196643	2196903	.	+	0	ID=GCA000160335_02164;Name=UPF0457 protein SAR2264;locus_tag=GCA000160335_02164;product=UPF0457 protein SAR2264;Parent=GCA000160335_02164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251935.1,SO:0001217,UniParc:UPI0000054BDD,UniRef:UniRef100_Q2FW79,UniRef:UniRef50_Q2FW79,UniRef:UniRef90_Q2FW79
contig_1	Pyrodigal	gene	2197035	2198405	.	-	.	ID=GCA000160335_02165_gene;locus_tag=GCA000160335_02165;gene=spoVV
contig_1	Pyrodigal	CDS	2197035	2198405	.	-	0	ID=GCA000160335_02165;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000160335_02165;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000160335_02165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,RefSeq:WP_001573509.1,SO:0001217,UniParc:UPI00003B1885,UniRef:UniRef100_A0A7Z7R124,UniRef:UniRef50_B9DM72,UniRef:UniRef90_A0A7U7PWQ6
contig_1	Pyrodigal	gene	2198641	2199609	.	-	.	ID=GCA000160335_02166_gene;locus_tag=GCA000160335_02166;gene=fepD
contig_1	Pyrodigal	CDS	2198641	2199609	.	-	0	ID=GCA000160335_02166;Name=Heme ABC type transporter HtsABC%2C permease protein HtsC;locus_tag=GCA000160335_02166;product=Heme ABC type transporter HtsABC%2C permease protein HtsC;gene=fepD;Parent=GCA000160335_02166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000989088.1,SO:0001217,UniParc:UPI00000CABFA,UniRef:UniRef100_A0A7Z7R104,UniRef:UniRef50_A0A2K4AJP4,UniRef:UniRef90_A0A2K4AJP4
contig_1	Pyrodigal	gene	2199606	2200637	.	-	.	ID=GCA000160335_02167_gene;locus_tag=GCA000160335_02167;gene=fepD
contig_1	Pyrodigal	CDS	2199606	2200637	.	-	0	ID=GCA000160335_02167;Name=Iron-dicitrate ABC transporter (Permease);locus_tag=GCA000160335_02167;product=Iron-dicitrate ABC transporter (Permease);gene=fepD;Parent=GCA000160335_02167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000974927.1,SO:0001217,UniParc:UPI00003B1886,UniRef:UniRef100_A0A7Z7W2B8,UniRef:UniRef50_A0A380G4K5,UniRef:UniRef90_A0A0U1MRT1
contig_1	Pyrodigal	gene	2200649	2201632	.	-	.	ID=GCA000160335_02168_gene;locus_tag=GCA000160335_02168;gene=fecB
contig_1	Pyrodigal	CDS	2200649	2201632	.	-	0	ID=GCA000160335_02168;Name=Iron-dicitrate ABC transporter (Binding lipoprotein);locus_tag=GCA000160335_02168;product=Iron-dicitrate ABC transporter (Binding lipoprotein);gene=fecB;Parent=GCA000160335_02168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,KEGG:K23181,RefSeq:WP_001214655.1,SO:0001217,UniParc:UPI00003B1887,UniRef:UniRef100_A0A7Z7W2G4,UniRef:UniRef50_S2Y8V6,UniRef:UniRef90_A0A0U1MR80
contig_1	Pyrodigal	gene	2202025	2203095	.	-	.	ID=GCA000160335_02169_gene;locus_tag=GCA000160335_02169;gene=sfaC
contig_1	Pyrodigal	CDS	2202025	2203095	.	-	0	ID=GCA000160335_02169;Name=staphyloferrin A biosynthesis protein SfaC;locus_tag=GCA000160335_02169;product=staphyloferrin A biosynthesis protein SfaC;gene=sfaC;Parent=GCA000160335_02169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000951636,COG:COG3457,COG:E,KEGG:K21898,RefSeq:WP_000951627.1,SO:0001217,UniParc:UPI00003B1888,UniRef:UniRef100_A0AAJ4YYM0,UniRef:UniRef50_Q2FW73,UniRef:UniRef90_Q2FW73;ec_number=5.1.1.12
contig_1	Pyrodigal	gene	2203102	2204859	.	-	.	ID=GCA000160335_02170_gene;locus_tag=GCA000160335_02170;gene=sfaB
contig_1	Pyrodigal	CDS	2203102	2204859	.	-	0	ID=GCA000160335_02170;Name=staphyloferrin A synthetase SfaB;locus_tag=GCA000160335_02170;product=staphyloferrin A synthetase SfaB;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaB;Parent=GCA000160335_02170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000262640,COG:COG4264,COG:P,KEGG:K23447,RefSeq:WP_000262632.1,SO:0001217,UniParc:UPI00003B1889,UniRef:UniRef100_A0A7Z7W2B1,UniRef:UniRef50_Q2FW72,UniRef:UniRef90_Q2FW72;ec_number=6.3.2.57
contig_1	Pyrodigal	gene	2204846	2206039	.	-	.	ID=GCA000160335_02171_gene;locus_tag=GCA000160335_02171;gene=sfaA
contig_1	Pyrodigal	CDS	2204846	2206039	.	-	0	ID=GCA000160335_02171;Name=staphyloferrin A export MFS transporter;locus_tag=GCA000160335_02171;product=staphyloferrin A export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sfaA;Parent=GCA000160335_02171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000170403,KEGG:K23448,RefSeq:WP_000170411.1,SO:0001217,UniParc:UPI00003B188A,UniRef:UniRef100_A0A7Z7W3K2,UniRef:UniRef50_Q2FW71,UniRef:UniRef90_Q2FW71
contig_1	Pyrodigal	gene	2206141	2208117	.	+	.	ID=GCA000160335_02172_gene;locus_tag=GCA000160335_02172;gene=sfaD
contig_1	Pyrodigal	CDS	2206141	2208117	.	+	0	ID=GCA000160335_02172;Name=D-ornithine--citrate ligase SfaD;locus_tag=GCA000160335_02172;product=D-ornithine--citrate ligase SfaD;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaD;Parent=GCA000160335_02172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001052566,COG:COG4264,COG:P,KEGG:K23446,RefSeq:WP_001052574.1,SO:0001217,UniParc:UPI00003B188B,UniRef:UniRef100_A0A7Z7R061,UniRef:UniRef50_Q2FW70,UniRef:UniRef90_Q2FW70;ec_number=6.3.2.58
contig_1	Pyrodigal	gene	2208278	2208787	.	-	.	ID=GCA000160335_02173_gene;locus_tag=GCA000160335_02173;gene=asp23
contig_1	Pyrodigal	CDS	2208278	2208787	.	-	0	ID=GCA000160335_02173;Name=Alkaline shock protein 23;locus_tag=GCA000160335_02173;product=Alkaline shock protein 23;gene=asp23;Parent=GCA000160335_02173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000215236.1,SO:0001217,UniParc:UPI0000054BEA,UniRef:UniRef100_Q2FW66,UniRef:UniRef50_Q2FW66,UniRef:UniRef90_Q2FW66
contig_1	Pyrodigal	gene	2208850	2209089	.	-	.	ID=GCA000160335_02174_gene;locus_tag=GCA000160335_02174
contig_1	Pyrodigal	CDS	2208850	2209089	.	-	0	ID=GCA000160335_02174;Name=DUF2273 domain-containing protein;locus_tag=GCA000160335_02174;product=DUF2273 domain-containing protein;Parent=GCA000160335_02174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5547,COG:S,RefSeq:WP_000002682.1,SO:0001217,UniParc:UPI00003B188C,UniRef:UniRef100_A0A7Z7R017,UniRef:UniRef50_Q2FW65,UniRef:UniRef90_Q2FW65
contig_1	Pyrodigal	gene	2209102	2209638	.	-	.	ID=GCA000160335_02175_gene;locus_tag=GCA000160335_02175;gene=amaP
contig_1	Pyrodigal	CDS	2209102	2209638	.	-	0	ID=GCA000160335_02175;Name=alkaline shock response membrane anchor protein AmaP;locus_tag=GCA000160335_02175;product=alkaline shock response membrane anchor protein AmaP;gene=amaP;Parent=GCA000160335_02175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825817.1,SO:0001217,UniParc:UPI00003B188D,UniRef:UniRef100_A0A7Z7R018,UniRef:UniRef50_Q2FW64,UniRef:UniRef90_Q2FW64
contig_1	Pyrodigal	gene	2209813	2211375	.	-	.	ID=GCA000160335_02176_gene;locus_tag=GCA000160335_02176;gene=betT
contig_1	Pyrodigal	CDS	2209813	2211375	.	-	0	ID=GCA000160335_02176;Name=BCCT family transporter;locus_tag=GCA000160335_02176;product=BCCT family transporter;gene=betT;Parent=GCA000160335_02176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000792332.1,SO:0001217,UniParc:UPI00003B188E,UniRef:UniRef100_A0A7Z7R041,UniRef:UniRef50_A0A9X4QYP5,UniRef:UniRef90_Q7BJZ6
contig_1	Pyrodigal	gene	2211683	2212690	.	-	.	ID=GCA000160335_02177_gene;locus_tag=GCA000160335_02177;gene=qor
contig_1	Pyrodigal	CDS	2211683	2212690	.	-	0	ID=GCA000160335_02177;Name=Zinc-type alcohol dehydrogenase-like protein MW2112;locus_tag=GCA000160335_02177;product=Zinc-type alcohol dehydrogenase-like protein MW2112;Dbxref=GO:0008270,GO:0016491;gene=qor;Parent=GCA000160335_02177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000781946.1,SO:0001217,UniParc:UPI00003B188F,UniRef:UniRef100_Q6GEP3,UniRef:UniRef50_Q5HM44,UniRef:UniRef90_P63475
contig_1	Pyrodigal	gene	2212925	2213929	.	-	.	ID=GCA000160335_02178_gene;locus_tag=GCA000160335_02178;gene=curA
contig_1	Pyrodigal	CDS	2212925	2213929	.	-	0	ID=GCA000160335_02178;Name=Quinone oxidoreductase;locus_tag=GCA000160335_02178;product=Quinone oxidoreductase;gene=curA;Parent=GCA000160335_02178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2130,COG:QR,SO:0001217,UniParc:UPI00003B1890,UniRef:UniRef100_A0A7Z7R0R8,UniRef:UniRef50_A0A1H5ZK44,UniRef:UniRef90_A0A7I8NIX0
contig_1	Pyrodigal	gene	2214209	2215078	.	-	.	ID=GCA000160335_02179_gene;locus_tag=GCA000160335_02179
contig_1	Pyrodigal	CDS	2214209	2215078	.	-	0	ID=GCA000160335_02179;Name=Alpha/beta hydrolase;locus_tag=GCA000160335_02179;product=Alpha/beta hydrolase;Parent=GCA000160335_02179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4814,COG:S,RefSeq:WP_000719346.1,SO:0001217,UniParc:UPI00003B1891,UniRef:UniRef100_A0A7Z7R088,UniRef:UniRef50_Q2G2D6,UniRef:UniRef90_Q2G2D6
contig_1	Pyrodigal	gene	2215344	2216756	.	-	.	ID=GCA000160335_02180_gene;locus_tag=GCA000160335_02180;gene=lacG
contig_1	Pyrodigal	CDS	2215344	2216756	.	-	0	ID=GCA000160335_02180;Name=6-phospho-beta-galactosidase;locus_tag=GCA000160335_02180;product=6-phospho-beta-galactosidase;Dbxref=GO:0005829,GO:0008422,GO:0019512,GO:0033920;gene=lacG;Parent=GCA000160335_02180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000169223.1,SO:0001217,UniParc:UPI00003B1892,UniRef:UniRef100_Q6GEP0,UniRef:UniRef50_C7N8L9,UniRef:UniRef90_Q2G2D5;ec_number=3.2.1.85
contig_1	Pyrodigal	gene	2216774	2218486	.	-	.	ID=GCA000160335_02181_gene;locus_tag=GCA000160335_02181;gene=lacE
contig_1	Pyrodigal	CDS	2216774	2218486	.	-	0	ID=GCA000160335_02181;Name=lactose-specific PTS transporter subunit EIIC;locus_tag=GCA000160335_02181;product=lactose-specific PTS transporter subunit EIIC;Dbxref=GO:0005886,GO:0009401,GO:0015155,GO:0016020,GO:0016301,GO:0019197,GO:0022869,GO:1901264;gene=lacE;Parent=GCA000160335_02181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1455,COG:G,KEGG:K02788,RefSeq:WP_000983330.1,SO:0001217,UniParc:UPI00000D772D,UniRef:UniRef100_Q5HE15,UniRef:UniRef50_P11162,UniRef:UniRef90_P11162;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2218492	2218803	.	-	.	ID=GCA000160335_02182_gene;locus_tag=GCA000160335_02182;gene=lacF
contig_1	Pyrodigal	CDS	2218492	2218803	.	-	0	ID=GCA000160335_02182;Name=PTS system lactose-specific EIIA component;locus_tag=GCA000160335_02182;product=PTS system lactose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016740,GO:0046872;gene=lacF;Parent=GCA000160335_02182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1447,COG:G,KEGG:K02786,RefSeq:WP_001078309.1,SO:0001217,UniParc:UPI0000054BF4,UniRef:UniRef100_Q5HE14,UniRef:UniRef50_P23532,UniRef:UniRef90_Q5HE14;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2218825	2219805	.	-	.	ID=GCA000160335_02183_gene;locus_tag=GCA000160335_02183;gene=lacD
contig_1	Pyrodigal	CDS	2218825	2219805	.	-	0	ID=GCA000160335_02183;Name=tagatose-bisphosphate aldolase;locus_tag=GCA000160335_02183;product=tagatose-bisphosphate aldolase;Dbxref=GO:0009024,GO:0009025,GO:0019512,GO:0061595,GO:1902777,GO:2001059;gene=lacD;Parent=GCA000160335_02183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3684,COG:GP,KEGG:K01635,RefSeq:WP_000047012.1,SO:0001217,UniParc:UPI00003B1893,UniRef:UniRef100_Q6GEN7,UniRef:UniRef50_P26593,UniRef:UniRef90_P0A011;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	2219809	2220741	.	-	.	ID=GCA000160335_02184_gene;locus_tag=GCA000160335_02184;gene=lacC
contig_1	Pyrodigal	CDS	2219809	2220741	.	-	0	ID=GCA000160335_02184;Name=tagatose-6-phosphate kinase;locus_tag=GCA000160335_02184;product=tagatose-6-phosphate kinase;Dbxref=GO:0005524,GO:0005829,GO:0008443,GO:0009024,GO:0019512,GO:2001059;gene=lacC;Parent=GCA000160335_02184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00917,RefSeq:WP_000604142.1,SO:0001217,UniParc:UPI00003B1894,UniRef:UniRef100_Q6GEN6,UniRef:UniRef50_P0A0B9,UniRef:UniRef90_P0A0B9;ec_number=2.7.1.144
contig_1	Pyrodigal	gene	2220754	2221269	.	-	.	ID=GCA000160335_02185_gene;locus_tag=GCA000160335_02185;gene=lacB
contig_1	Pyrodigal	CDS	2220754	2221269	.	-	0	ID=GCA000160335_02185;Name=galactose-6-phosphate isomerase subunit LacB;locus_tag=GCA000160335_02185;product=galactose-6-phosphate isomerase subunit LacB;Dbxref=GO:0004751,GO:0009052,GO:0016861,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacB;Parent=GCA000160335_02185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,RefSeq:WP_000684746.1,SO:0001217,UniParc:UPI0000054BF7,UniRef:UniRef100_Q2G2R0,UniRef:UniRef50_P23495,UniRef:UniRef90_Q2G2R0;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2221285	2221713	.	-	.	ID=GCA000160335_02186_gene;locus_tag=GCA000160335_02186;gene=lacA
contig_1	Pyrodigal	CDS	2221285	2221713	.	-	0	ID=GCA000160335_02186;Name=galactose-6-phosphate isomerase subunit LacA;locus_tag=GCA000160335_02186;product=galactose-6-phosphate isomerase subunit LacA;Dbxref=GO:0004751,GO:0009052,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacA;Parent=GCA000160335_02186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,KEGG:K01819,RefSeq:WP_000974607.1,SO:0001217,UniParc:UPI0001B702A2,UniRef:UniRef100_UPI0001B702A2,UniRef:UniRef50_Q2G2R4,UniRef:UniRef90_Q2G2R4;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2222080	2222835	.	-	.	ID=GCA000160335_02187_gene;locus_tag=GCA000160335_02187;gene=lacR
contig_1	Pyrodigal	CDS	2222080	2222835	.	-	0	ID=GCA000160335_02187;Name=Lactose phosphotransferase system repressor;locus_tag=GCA000160335_02187;product=Lactose phosphotransferase system repressor;Dbxref=GO:0003677,GO:0003700,GO:0005988;gene=lacR;Parent=GCA000160335_02187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02530,RefSeq:WP_001032743.1,SO:0001217,UniParc:UPI00003B1895,UniRef:UniRef100_Q6GEN3,UniRef:UniRef50_P0A0Q0,UniRef:UniRef90_P0A0Q0
contig_1	Pyrodigal	gene	2223077	2223817	.	+	.	ID=GCA000160335_02188_gene;locus_tag=GCA000160335_02188;gene=cobB
contig_1	Pyrodigal	CDS	2223077	2223817	.	+	0	ID=GCA000160335_02188;Name=NAD-dependent protein deacylase;locus_tag=GCA000160335_02188;product=NAD-dependent protein deacylase;Dbxref=GO:0005737,GO:0008270,GO:0032041,GO:0034979,GO:0046969,GO:0046970,GO:0051287,GO:0070403,GO:0097372,GO:0140765,GO:0141222;gene=cobB;Parent=GCA000160335_02188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_001573518.1,SO:0001217,UniParc:UPI00019CD4E7,UniRef:UniRef100_A0A7Z7R0R3,UniRef:UniRef50_P66815,UniRef:UniRef90_P66815;ec_number=2.3.1.286
contig_1	Pyrodigal	gene	2224075	2224683	.	-	.	ID=GCA000160335_02189_gene;locus_tag=GCA000160335_02189
contig_1	Pyrodigal	CDS	2224075	2224683	.	-	0	ID=GCA000160335_02189;Name=DUF3885 domain-containing protein;locus_tag=GCA000160335_02189;product=DUF3885 domain-containing protein;Parent=GCA000160335_02189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000333457.1,SO:0001217,UniParc:UPI00003B1897,UniRef:UniRef100_A0A7Z7R027,UniRef:UniRef50_Q2FW59,UniRef:UniRef90_Q2FW59
contig_1	Pyrodigal	gene	2224697	2224990	.	-	.	ID=GCA000160335_02190_gene;locus_tag=GCA000160335_02190
contig_1	Pyrodigal	CDS	2224697	2224990	.	-	0	ID=GCA000160335_02190;Name=Novel toxin 21 domain-containing protein;locus_tag=GCA000160335_02190;product=Novel toxin 21 domain-containing protein;Parent=GCA000160335_02190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B70199,UniRef:UniRef100_A0A7Z7R028,UniRef:UniRef50_A0A0M0T411,UniRef:UniRef90_A0AAN2D729
contig_1	Pyrodigal	gene	2224945	2225070	.	-	.	ID=GCA000160335_02191_gene;locus_tag=GCA000160335_02191
contig_1	Pyrodigal	CDS	2224945	2225070	.	-	0	ID=GCA000160335_02191;Name=Doubtful CDS No database matches;locus_tag=GCA000160335_02191;product=Doubtful CDS No database matches;Parent=GCA000160335_02191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573519.1,SO:0001217,UniParc:UPI00003B1898,UniRef:UniRef100_A0A7Z7R051,UniRef:UniRef50_Q2FW58,UniRef:UniRef90_Q2FW58
contig_1	Pyrodigal	gene	2225291	2226139	.	-	.	ID=GCA000160335_02192_gene;locus_tag=GCA000160335_02192;gene=aRA1
contig_1	Pyrodigal	CDS	2225291	2226139	.	-	0	ID=GCA000160335_02192;Name=Aldo/keto reductase;locus_tag=GCA000160335_02192;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000160335_02192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_001015495.1,SO:0001217,UniParc:UPI00003B1899,UniRef:UniRef100_A0A7Z7R0F9,UniRef:UniRef50_A0A0U1MRZ3,UniRef:UniRef90_A0A0U1MRZ3
contig_1	Pyrodigal	gene	2226308	2226625	.	-	.	ID=GCA000160335_02193_gene;locus_tag=GCA000160335_02193;gene=merR
contig_1	Pyrodigal	CDS	2226308	2226625	.	-	0	ID=GCA000160335_02193;Name=MerR family DNA-binding transcriptional regulator;locus_tag=GCA000160335_02193;product=MerR family DNA-binding transcriptional regulator;gene=merR;Parent=GCA000160335_02193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0015D6B6C4
contig_1	Infernal	gene	2226862	2227012	.	+	.	ID=GCA000160335_02194_gene;locus_tag=GCA000160335_02194;gene=tsr32
contig_1	Infernal	ncRNA	2226862	2227012	3.3e-28	+	.	ID=GCA000160335_02194;Name=S. aureus tsr32 small RNA;locus_tag=GCA000160335_02194;product=S. aureus tsr32 small RNA;Dbxref=RFAM:RF02581;Parent=GCA000160335_02194_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02581
contig_1	Pyrodigal	gene	2227032	2229458	.	+	.	ID=GCA000160335_02195_gene;locus_tag=GCA000160335_02195;gene=hysA
contig_1	Pyrodigal	CDS	2227032	2229458	.	+	0	ID=GCA000160335_02195;Name=hyaluronate lyase precursor;locus_tag=GCA000160335_02195;product=hyaluronate lyase precursor;gene=hysA;Parent=GCA000160335_02195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01727,RefSeq:WP_000222271.1,SO:0001217,UniParc:UPI00003B189B,UniRef:UniRef100_A0A7Z7R095,UniRef:UniRef50_Q59801,UniRef:UniRef90_A0A7Z7R095,VFDB:VFC0251,VFDB:VFG001315;ec_number=4.2.2.1
contig_1	Pyrodigal	gene	2229518	2230372	.	-	.	ID=GCA000160335_02196_gene;locus_tag=GCA000160335_02196;gene=nlpD
contig_1	Pyrodigal	CDS	2229518	2230372	.	-	0	ID=GCA000160335_02196;Name=lysostaphin;locus_tag=GCA000160335_02196;product=lysostaphin;gene=nlpD;Parent=GCA000160335_02196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_001044451.1,SO:0001217,UniParc:UPI00003B189C,UniRef:UniRef100_A0A7Z7R138,UniRef:UniRef50_Q2FW53,UniRef:UniRef90_Q2FW53
contig_1	Pyrodigal	gene	2230583	2231398	.	-	.	ID=GCA000160335_02197_gene;locus_tag=GCA000160335_02197;gene=cof
contig_1	Pyrodigal	CDS	2230583	2231398	.	-	0	ID=GCA000160335_02197;Name=putative hydrolase in edin-B 3'region;locus_tag=GCA000160335_02197;product=putative hydrolase in edin-B 3'region;Dbxref=GO:0000287,GO:0005829,GO:0016791;gene=cof;Parent=GCA000160335_02197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000044369.1,SO:0001217,UniParc:UPI00003B189D,UniRef:UniRef100_Q6GEM5,UniRef:UniRef50_Q8GAX4,UniRef:UniRef90_Q8GAX4;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2231693	2232118	.	+	.	ID=GCA000160335_02198_gene;locus_tag=GCA000160335_02198
contig_1	Pyrodigal	CDS	2231693	2232118	.	+	0	ID=GCA000160335_02198;Name=MAP domain-containing protein;locus_tag=GCA000160335_02198;product=MAP domain-containing protein;Parent=GCA000160335_02198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769709.1,SO:0001217,UniParc:UPI00003B189E,UniRef:UniRef100_A0A7Z7W2C9,UniRef:UniRef50_A0A7U7JQY5,UniRef:UniRef90_A0A7U7JQY5
contig_1	Pyrodigal	gene	2232509	2233213	.	-	.	ID=GCA000160335_02199_gene;locus_tag=GCA000160335_02199;gene=budA
contig_1	Pyrodigal	CDS	2232509	2233213	.	-	0	ID=GCA000160335_02199;Name=acetolactate decarboxylase;locus_tag=GCA000160335_02199;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000160335_02199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,RefSeq:WP_000179061.1,SO:0001217,UniParc:UPI00003B189F,UniRef:UniRef100_A0A7Z7W2H3,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MRE6;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2233250	2234914	.	-	.	ID=GCA000160335_02200_gene;locus_tag=GCA000160335_02200;gene=alsS
contig_1	Pyrodigal	CDS	2233250	2234914	.	-	0	ID=GCA000160335_02200;Name=acetolactate synthase AlsS;locus_tag=GCA000160335_02200;product=acetolactate synthase AlsS;Dbxref=GO:0000287,GO:0003984,GO:0030976,GO:0034077;gene=alsS;Parent=GCA000160335_02200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,RefSeq:WP_000130145.1,SO:0001217,UniParc:UPI00003B18A0,UniRef:UniRef100_A0A7Z7W2R3,UniRef:UniRef50_A0A0U1MRE5,UniRef:UniRef90_A0A0D6WCP3;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2236644	2238080	.	-	.	ID=GCA000160335_02201_gene;locus_tag=GCA000160335_02201;gene=recG
contig_1	Pyrodigal	CDS	2236644	2238080	.	-	0	ID=GCA000160335_02201;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000160335_02201;product=ATP-dependent DNA helicase RecG;gene=recG;Parent=GCA000160335_02201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2865,COG:K,RefSeq:WP_000204276.1,SO:0001217,UniParc:UPI00019F4C9A,UniRef:UniRef100_A0A7Z7W2C1,UniRef:UniRef50_A0A9Q2HEK4,UniRef:UniRef90_A0A9Q2HEK4
contig_1	Pyrodigal	gene	2238429	2238827	.	-	.	ID=GCA000160335_02202_gene;locus_tag=GCA000160335_02202;gene=rpsI
contig_1	Pyrodigal	CDS	2238429	2238827	.	-	0	ID=GCA000160335_02202;Name=30S ribosomal protein S9;locus_tag=GCA000160335_02202;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA000160335_02202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_000170975.1,SO:0001217,UniParc:UPI0000048023,UniRef:UniRef100_Q2FW39,UniRef:UniRef50_Q2FW39,UniRef:UniRef90_Q2FW39
contig_1	Pyrodigal	gene	2238841	2239278	.	-	.	ID=GCA000160335_02203_gene;locus_tag=GCA000160335_02203;gene=rplM
contig_1	Pyrodigal	CDS	2238841	2239278	.	-	0	ID=GCA000160335_02203;Name=50S ribosomal protein L13;locus_tag=GCA000160335_02203;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA000160335_02203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,KEGG:K02871,RefSeq:WP_001250038.1,SO:0001217,UniParc:UPI0000054B7F,UniRef:UniRef100_Q2FW38,UniRef:UniRef50_Q2FW38,UniRef:UniRef90_Q2FW38
contig_1	Infernal	regulatory_region	2239405	2239474	3.1e-09	-	.	ID=HBCHLJIIAO_170;Name=Ribosomal protein L13 leader;product=Ribosomal protein L13 leader;Dbxref=RFAM:RF00555;inference=profile:Rfam:RF00555;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2239526	2240320	.	-	.	ID=GCA000160335_02204_gene;locus_tag=GCA000160335_02204;gene=truA
contig_1	Pyrodigal	CDS	2239526	2240320	.	-	0	ID=GCA000160335_02204;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000160335_02204;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000160335_02204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0101,COG:J,KEGG:K06173,RefSeq:WP_001221836.1,SO:0001217,UniParc:UPI00003B18A4,UniRef:UniRef100_Q6GEL6,UniRef:UniRef50_Q2FW37,UniRef:UniRef90_Q2FW37;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	2240325	2241131	.	-	.	ID=GCA000160335_02205_gene;locus_tag=GCA000160335_02205;gene=ecfT
contig_1	Pyrodigal	CDS	2240325	2241131	.	-	0	ID=GCA000160335_02205;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000160335_02205;product=Energy-coupling factor transporter transmembrane protein EcfT;Dbxref=GO:0005886,GO:0022857;gene=ecfT;Parent=GCA000160335_02205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000791607.1,SO:0001217,UniParc:UPI00003B18A5,UniRef:UniRef100_A0A7Z7R037,UniRef:UniRef50_D3ERJ1,UniRef:UniRef90_D3ERJ1
contig_1	Pyrodigal	gene	2241121	2241981	.	-	.	ID=GCA000160335_02206_gene;locus_tag=GCA000160335_02206;gene=ecfA2
contig_1	Pyrodigal	CDS	2241121	2241981	.	-	0	ID=GCA000160335_02206;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000160335_02206;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000160335_02206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000586768.1,SO:0001217,UniParc:UPI00003B18A6,UniRef:UniRef100_Q6GEL4,UniRef:UniRef50_Q2FW35,UniRef:UniRef90_Q2FW35;ec_number=3.6.3.-
contig_1	Pyrodigal	gene	2241978	2242787	.	-	.	ID=GCA000160335_02207_gene;locus_tag=GCA000160335_02207;gene=ecfA1
contig_1	Pyrodigal	CDS	2241978	2242787	.	-	0	ID=GCA000160335_02207;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000160335_02207;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA1;Parent=GCA000160335_02207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000389651.1,SO:0001217,UniParc:UPI00003B18A7,UniRef:UniRef100_Q6GEL3,UniRef:UniRef50_Q2YYM4,UniRef:UniRef90_Q2YYM4;ec_number=7.-.-.-
contig_1	Infernal	gene	2242094	2242159	.	+	.	ID=GCA000160335_02208_gene;locus_tag=GCA000160335_02208;gene=sau-31
contig_1	Infernal	ncRNA	2242094	2242159	6.6e-17	+	.	ID=GCA000160335_02208;Name=Staphylococcus sRNA sau-31;locus_tag=GCA000160335_02208;product=Staphylococcus sRNA sau-31;Dbxref=RFAM:RF02389;Parent=GCA000160335_02208_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02389
contig_1	Infernal	gene	2243131	2243194	.	-	.	ID=GCA000160335_02209_gene;locus_tag=GCA000160335_02209;gene=sau-30
contig_1	Infernal	ncRNA	2243131	2243194	6.3e-16	-	.	ID=GCA000160335_02209;Name=Staphylococcus sRNA sau-30;locus_tag=GCA000160335_02209;product=Staphylococcus sRNA sau-30;Dbxref=RFAM:RF02388;Parent=GCA000160335_02209_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02388
contig_1	Pyrodigal	gene	2243320	2243688	.	-	.	ID=GCA000160335_02210_gene;locus_tag=GCA000160335_02210;gene=rplQ
contig_1	Pyrodigal	CDS	2243320	2243688	.	-	0	ID=GCA000160335_02210;Name=50S ribosomal protein L17;locus_tag=GCA000160335_02210;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA000160335_02210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,RefSeq:WP_000542274.1,SO:0001217,UniParc:UPI0000054BB3,UniRef:UniRef100_Q2FW33,UniRef:UniRef50_P20277,UniRef:UniRef90_Q2FW33
contig_1	Pyrodigal	gene	2243705	2244649	.	-	.	ID=GCA000160335_02211_gene;locus_tag=GCA000160335_02211;gene=rpoA
contig_1	Pyrodigal	CDS	2243705	2244649	.	-	0	ID=GCA000160335_02211;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000160335_02211;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA000160335_02211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_000569649.1,SO:0001217,UniParc:UPI0000054BBD,UniRef:UniRef100_Q2FW32,UniRef:UniRef50_Q2FW32,UniRef:UniRef90_Q2FW32;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2244724	2245113	.	-	.	ID=GCA000160335_02212_gene;locus_tag=GCA000160335_02212;gene=rpsK
contig_1	Pyrodigal	CDS	2244724	2245113	.	-	0	ID=GCA000160335_02212;Name=30S ribosomal protein S11;locus_tag=GCA000160335_02212;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000160335_02212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_000101625.1,SO:0001217,UniParc:UPI0000048025,UniRef:UniRef100_Q2FW31,UniRef:UniRef50_Q6N4V6,UniRef:UniRef90_B9E9L6
contig_1	Pyrodigal	gene	2245137	2245502	.	-	.	ID=GCA000160335_02213_gene;locus_tag=GCA000160335_02213;gene=rpsM
contig_1	Pyrodigal	CDS	2245137	2245502	.	-	0	ID=GCA000160335_02213;Name=30S ribosomal protein S13;locus_tag=GCA000160335_02213;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000160335_02213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_000090796.1,SO:0001217,UniParc:UPI0000048027,UniRef:UniRef100_Q2FW30,UniRef:UniRef50_P20282,UniRef:UniRef90_Q2FW30
contig_1	Pyrodigal	gene	2245525	2245638	.	-	.	ID=GCA000160335_02214_gene;locus_tag=GCA000160335_02214;gene=rpmJ
contig_1	Pyrodigal	CDS	2245525	2245638	.	-	0	ID=GCA000160335_02214;Name=50S ribosomal protein L36;locus_tag=GCA000160335_02214;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA000160335_02214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_000868342.1,SO:0001217,UniParc:UPI0000054BDA,UniRef:UniRef100_Q2FW29,UniRef:UniRef50_P07841,UniRef:UniRef90_P07841
contig_1	Pyrodigal	gene	2245670	2245888	.	-	.	ID=GCA000160335_02215_gene;locus_tag=GCA000160335_02215;gene=infA
contig_1	Pyrodigal	CDS	2245670	2245888	.	-	0	ID=GCA000160335_02215;Name=translation initiation factor IF-1;locus_tag=GCA000160335_02215;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000160335_02215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_001118443.1,SO:0001217,UniParc:UPI0000054BE5,UniRef:UniRef100_Q2FW28,UniRef:UniRef50_P0A3K4,UniRef:UniRef90_Q2FW28
contig_1	Pyrodigal	gene	2246081	2246728	.	-	.	ID=GCA000160335_02216_gene;locus_tag=GCA000160335_02216;gene=adk
contig_1	Pyrodigal	CDS	2246081	2246728	.	-	0	ID=GCA000160335_02216;Name=adenylate kinase;locus_tag=GCA000160335_02216;product=adenylate kinase;Dbxref=GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0008270,GO:0016776,GO:0019205,GO:0044209;gene=adk;Parent=GCA000160335_02216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0563,COG:F,RefSeq:WP_001021468.1,SO:0001217,UniParc:UPI000012DBE8,UniRef:UniRef100_Q5HDX9,UniRef:UniRef50_B2A4G2,UniRef:UniRef90_Q5HM20;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	2246745	2248037	.	-	.	ID=GCA000160335_02217_gene;locus_tag=GCA000160335_02217;gene=secY
contig_1	Pyrodigal	CDS	2246745	2248037	.	-	0	ID=GCA000160335_02217;Name=preprotein translocase subunit SecY;locus_tag=GCA000160335_02217;product=preprotein translocase subunit SecY;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0016020,GO:0043952,GO:0065002;gene=secY;Parent=GCA000160335_02217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000616784.1,SO:0001217,UniParc:UPI0000054BFA,UniRef:UniRef100_O08387,UniRef:UniRef50_O08387,UniRef:UniRef90_O08387
contig_1	Pyrodigal	gene	2248037	2248477	.	-	.	ID=GCA000160335_02218_gene;locus_tag=GCA000160335_02218;gene=rplO
contig_1	Pyrodigal	CDS	2248037	2248477	.	-	0	ID=GCA000160335_02218;Name=50S ribosomal protein L15;locus_tag=GCA000160335_02218;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000160335_02218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,KEGG:K02876,RefSeq:WP_000766074.1,SO:0001217,UniParc:UPI0000054C04,UniRef:UniRef100_P0A0F8,UniRef:UniRef50_Q5M2D2,UniRef:UniRef90_P0A0F8
contig_1	Pyrodigal	gene	2248494	2248673	.	-	.	ID=GCA000160335_02219_gene;locus_tag=GCA000160335_02219;gene=rpmD
contig_1	Pyrodigal	CDS	2248494	2248673	.	-	0	ID=GCA000160335_02219;Name=50S ribosomal protein L30;locus_tag=GCA000160335_02219;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000160335_02219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1841,COG:J,RefSeq:WP_001096577.1,SO:0001217,UniParc:UPI0000054C0F,UniRef:UniRef100_P0A0G2,UniRef:UniRef50_P0A0G2,UniRef:UniRef90_P0A0G2
contig_1	Pyrodigal	gene	2248690	2249190	.	-	.	ID=GCA000160335_02220_gene;locus_tag=GCA000160335_02220;gene=rpsE
contig_1	Pyrodigal	CDS	2248690	2249190	.	-	0	ID=GCA000160335_02220;Name=30S ribosomal protein S5;locus_tag=GCA000160335_02220;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000160335_02220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_000113851.1,SO:0001217,UniParc:UPI0000048021,UniRef:UniRef100_Q2FW23,UniRef:UniRef50_P21467,UniRef:UniRef90_B9DM30
contig_1	Pyrodigal	gene	2249211	2249570	.	-	.	ID=GCA000160335_02221_gene;locus_tag=GCA000160335_02221;gene=rplR
contig_1	Pyrodigal	CDS	2249211	2249570	.	-	0	ID=GCA000160335_02221;Name=50S ribosomal protein L18;locus_tag=GCA000160335_02221;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000160335_02221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_000623881.1,SO:0001217,UniParc:UPI0000054C23,UniRef:UniRef100_Q2FW22,UniRef:UniRef50_Q2FW22,UniRef:UniRef90_Q2FW22
contig_1	Pyrodigal	gene	2249601	2250137	.	-	.	ID=GCA000160335_02222_gene;locus_tag=GCA000160335_02222;gene=rplF
contig_1	Pyrodigal	CDS	2249601	2250137	.	-	0	ID=GCA000160335_02222;Name=50S ribosomal protein L6;locus_tag=GCA000160335_02222;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000160335_02222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_000091975.1,SO:0001217,UniParc:UPI0000054C2C,UniRef:UniRef100_Q2FW21,UniRef:UniRef50_B1XJJ3,UniRef:UniRef90_Q2FW21
contig_1	Pyrodigal	gene	2250162	2250560	.	-	.	ID=GCA000160335_02223_gene;locus_tag=GCA000160335_02223;gene=rpsH
contig_1	Pyrodigal	CDS	2250162	2250560	.	-	0	ID=GCA000160335_02223;Name=30S ribosomal protein S8;locus_tag=GCA000160335_02223;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA000160335_02223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_000178880.1,SO:0001217,UniParc:UPI0001B701AE,UniRef:UniRef100_UPI0001B701AE,UniRef:UniRef50_P12879,UniRef:UniRef90_B9DM33
contig_1	Pyrodigal	gene	2250592	2250777	.	-	.	ID=GCA000160335_02224_gene;locus_tag=GCA000160335_02224;gene=rpsZ
contig_1	Pyrodigal	CDS	2250592	2250777	.	-	0	ID=GCA000160335_02224;Name=type Z 30S ribosomal protein S14;locus_tag=GCA000160335_02224;product=type Z 30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008270,GO:0015935,GO:0019843;gene=rpsZ;Parent=GCA000160335_02224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_001140799.1,SO:0001217,UniParc:UPI0000048028,UniRef:UniRef100_Q2FW19,UniRef:UniRef50_P12878,UniRef:UniRef90_Q2FW19
contig_1	Pyrodigal	gene	2250800	2251339	.	-	.	ID=GCA000160335_02225_gene;locus_tag=GCA000160335_02225;gene=rplE
contig_1	Pyrodigal	CDS	2250800	2251339	.	-	0	ID=GCA000160335_02225;Name=50S ribosomal protein L5;locus_tag=GCA000160335_02225;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000160335_02225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_001080824.1,SO:0001217,UniParc:UPI00000D76D0,UniRef:UniRef100_Q2FW18,UniRef:UniRef50_Q6N4U5,UniRef:UniRef90_Q2FW18
contig_1	Pyrodigal	gene	2251366	2251683	.	-	.	ID=GCA000160335_02226_gene;locus_tag=GCA000160335_02226;gene=rplX
contig_1	Pyrodigal	CDS	2251366	2251683	.	-	0	ID=GCA000160335_02226;Name=50S ribosomal protein L24;locus_tag=GCA000160335_02226;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplX;Parent=GCA000160335_02226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_000547687.1,SO:0001217,UniParc:UPI0000054C5E,UniRef:UniRef100_Q2FW17,UniRef:UniRef50_P0CI78,UniRef:UniRef90_Q49ZF7
contig_1	Pyrodigal	gene	2251719	2252087	.	-	.	ID=GCA000160335_02227_gene;locus_tag=GCA000160335_02227;gene=rplN
contig_1	Pyrodigal	CDS	2251719	2252087	.	-	0	ID=GCA000160335_02227;Name=50S ribosomal protein L14;locus_tag=GCA000160335_02227;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000160335_02227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,RefSeq:WP_000615921.1,SO:0001217,UniParc:UPI0000054C69,UniRef:UniRef100_Q2FW16,UniRef:UniRef50_B2LMN0,UniRef:UniRef90_Q927L7
contig_1	Pyrodigal	gene	2252119	2252382	.	-	.	ID=GCA000160335_02228_gene;locus_tag=GCA000160335_02228;gene=rpsQ
contig_1	Pyrodigal	CDS	2252119	2252382	.	-	0	ID=GCA000160335_02228;Name=30S ribosomal protein S17;locus_tag=GCA000160335_02228;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000160335_02228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_000004086.1,SO:0001217,UniParc:UPI000004801D,UniRef:UniRef100_Q2FW15,UniRef:UniRef50_P12874,UniRef:UniRef90_Q2FW15
contig_1	Pyrodigal	gene	2252406	2252615	.	-	.	ID=GCA000160335_02229_gene;locus_tag=GCA000160335_02229;gene=rpmC
contig_1	Pyrodigal	CDS	2252406	2252615	.	-	0	ID=GCA000160335_02229;Name=50S ribosomal protein L29;locus_tag=GCA000160335_02229;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000160335_02229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0255,COG:J,RefSeq:WP_000644737.1,SO:0001217,UniParc:UPI0000133E90,UniRef:UniRef100_Q2FW14,UniRef:UniRef50_Q2FW14,UniRef:UniRef90_Q2FW14
contig_1	Pyrodigal	gene	2252605	2253039	.	-	.	ID=GCA000160335_02230_gene;locus_tag=GCA000160335_02230;gene=rplP
contig_1	Pyrodigal	CDS	2252605	2253039	.	-	0	ID=GCA000160335_02230;Name=50S ribosomal protein L16;locus_tag=GCA000160335_02230;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000160335_02230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,RefSeq:WP_000926310.1,SO:0001217,UniParc:UPI00000D76A9,UniRef:UniRef100_Q2FW13,UniRef:UniRef50_Q2FW13,UniRef:UniRef90_Q2FW13
contig_1	Pyrodigal	gene	2253042	2253695	.	-	.	ID=GCA000160335_02231_gene;locus_tag=GCA000160335_02231;gene=rpsC
contig_1	Pyrodigal	CDS	2253042	2253695	.	-	0	ID=GCA000160335_02231;Name=30S ribosomal protein S3;locus_tag=GCA000160335_02231;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000160335_02231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_000529877.1,SO:0001217,UniParc:UPI0000134FAF,UniRef:UniRef100_Q2FW12,UniRef:UniRef50_P23309,UniRef:UniRef90_Q2FW12
contig_1	Pyrodigal	gene	2253719	2254072	.	-	.	ID=GCA000160335_02232_gene;locus_tag=GCA000160335_02232;gene=rplV
contig_1	Pyrodigal	CDS	2253719	2254072	.	-	0	ID=GCA000160335_02232;Name=50S ribosomal protein L22;locus_tag=GCA000160335_02232;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000160335_02232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_000387527.1,SO:0001217,UniParc:UPI0000054ADA,UniRef:UniRef100_Q2FW11,UniRef:UniRef50_Q2FW11,UniRef:UniRef90_Q2FW11
contig_1	Pyrodigal	gene	2254101	2254379	.	-	.	ID=GCA000160335_02233_gene;locus_tag=GCA000160335_02233;gene=rpsS
contig_1	Pyrodigal	CDS	2254101	2254379	.	-	0	ID=GCA000160335_02233;Name=30S ribosomal protein S19;locus_tag=GCA000160335_02233;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000160335_02233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_000124353.1,SO:0001217,UniParc:UPI000004802B,UniRef:UniRef100_Q2FW10,UniRef:UniRef50_Q49ZG4,UniRef:UniRef90_Q49ZG4
contig_1	Pyrodigal	gene	2254446	2255279	.	-	.	ID=GCA000160335_02234_gene;locus_tag=GCA000160335_02234;gene=rplB
contig_1	Pyrodigal	CDS	2254446	2255279	.	-	0	ID=GCA000160335_02234;Name=50S ribosomal protein L2;locus_tag=GCA000160335_02234;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000160335_02234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,KEGG:K02886,RefSeq:WP_000985472.1,SO:0001217,UniParc:UPI00000522A9,UniRef:UniRef100_P60430,UniRef:UniRef50_A1BJ31,UniRef:UniRef90_P60430
contig_1	Pyrodigal	gene	2255312	2255587	.	-	.	ID=GCA000160335_02235_gene;locus_tag=GCA000160335_02235;gene=rplW
contig_1	Pyrodigal	CDS	2255312	2255587	.	-	0	ID=GCA000160335_02235;Name=50S ribosomal protein L23;locus_tag=GCA000160335_02235;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA000160335_02235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_000388082.1,SO:0001217,UniParc:UPI00000549A8,UniRef:UniRef100_Q2FW08,UniRef:UniRef50_A0QSD3,UniRef:UniRef90_B9DM17
contig_1	Pyrodigal	gene	2255587	2256210	.	-	.	ID=GCA000160335_02236_gene;locus_tag=GCA000160335_02236;gene=rplD
contig_1	Pyrodigal	CDS	2255587	2256210	.	-	0	ID=GCA000160335_02236;Name=50S ribosomal protein L4;locus_tag=GCA000160335_02236;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000160335_02236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_000024830.1,SO:0001217,UniParc:UPI00003B18A8,UniRef:UniRef100_Q6GEI4,UniRef:UniRef50_P42921,UniRef:UniRef90_Q49ZG7
contig_1	Pyrodigal	gene	2256237	2256899	.	-	.	ID=GCA000160335_02237_gene;locus_tag=GCA000160335_02237;gene=rplC
contig_1	Pyrodigal	CDS	2256237	2256899	.	-	0	ID=GCA000160335_02237;Name=50S ribosomal protein L3 RplC;locus_tag=GCA000160335_02237;product=50S ribosomal protein L3 RplC;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000160335_02237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,KEGG:K02906,RefSeq:WP_000160212.1,SO:0001217,UniParc:UPI00000D76AA,UniRef:UniRef100_Q2FW06,UniRef:UniRef50_Q2FW06,UniRef:UniRef90_Q2FW06
contig_1	Pyrodigal	gene	2256927	2257235	.	-	.	ID=GCA000160335_02238_gene;locus_tag=GCA000160335_02238;gene=rpsJ_Y58D
contig_1	Pyrodigal	CDS	2256927	2257235	.	-	0	ID=GCA000160335_02238;Name=30S ribosomal protein S10;locus_tag=GCA000160335_02238;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ_Y58D;Parent=GCA000160335_02238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001118667.1,SO:0001217,UniParc:UPI0000048024,UniRef:UniRef100_Q5HLZ8,UniRef:UniRef50_P0A7R5,UniRef:UniRef90_B9E9J0
contig_1	Pyrodigal	gene	2257592	2257981	.	+	.	ID=GCA000160335_02239_gene;locus_tag=GCA000160335_02239
contig_1	Pyrodigal	CDS	2257592	2257981	.	+	0	ID=GCA000160335_02239;Name=Integral membrane protein;locus_tag=GCA000160335_02239;product=Integral membrane protein;Parent=GCA000160335_02239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000788443.1,SO:0001217,UniParc:UPI00000CAA87,UniRef:UniRef100_Q2FW05,UniRef:UniRef50_Q2FW05,UniRef:UniRef90_Q2FW05
contig_1	Pyrodigal	gene	2258174	2259508	.	-	.	ID=GCA000160335_02240_gene;locus_tag=GCA000160335_02240;gene=nCS2
contig_1	Pyrodigal	CDS	2258174	2259508	.	-	0	ID=GCA000160335_02240;Name=NCS2 family permease;locus_tag=GCA000160335_02240;product=NCS2 family permease;gene=nCS2;Parent=GCA000160335_02240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_000800700.1,SO:0001217,UniParc:UPI00000D7655,UniRef:UniRef100_Q2FW04,UniRef:UniRef50_O34987,UniRef:UniRef90_Q2FW04
contig_1	Pyrodigal	gene	2259621	2261756	.	-	.	ID=GCA000160335_02241_gene;locus_tag=GCA000160335_02241;gene=topB
contig_1	Pyrodigal	CDS	2259621	2261756	.	-	0	ID=GCA000160335_02241;Name=DNA topoisomerase 3;locus_tag=GCA000160335_02241;product=DNA topoisomerase 3;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0006265,GO:0006281,GO:0006310,GO:0043597;gene=topB;Parent=GCA000160335_02241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_000838499.1,SO:0001217,UniParc:UPI00003B18AA,UniRef:UniRef100_Q6GEH9,UniRef:UniRef50_P0C2W6,UniRef:UniRef90_P0C2W6;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	2261943	2262830	.	+	.	ID=GCA000160335_02242_gene;locus_tag=GCA000160335_02242
contig_1	Pyrodigal	CDS	2261943	2262830	.	+	0	ID=GCA000160335_02242;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02242;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_02242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000029542.1,SO:0001217,UniParc:UPI00021E18B0,UniRef:UniRef100_A0A7Z7R0C6,UniRef:UniRef50_Q2FW01,UniRef:UniRef90_Q2FW01
contig_1	Pyrodigal	gene	2263011	2263874	.	+	.	ID=GCA000160335_02243_gene;locus_tag=GCA000160335_02243;gene=glcU
contig_1	Pyrodigal	CDS	2263011	2263874	.	+	0	ID=GCA000160335_02243;Name=putative glucose uptake protein GlcU;locus_tag=GCA000160335_02243;product=putative glucose uptake protein GlcU;Dbxref=GO:0005886,GO:0015144;gene=glcU;Parent=GCA000160335_02243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4975,COG:G,KEGG:K05340,RefSeq:WP_001159900.1,SO:0001217,UniParc:UPI00003B18AC,UniRef:UniRef100_Q6GEH7,UniRef:UniRef50_O07881,UniRef:UniRef90_Q6GEH7
contig_1	Pyrodigal	gene	2264293	2265201	.	-	.	ID=GCA000160335_02244_gene;locus_tag=GCA000160335_02244;gene=yfdV
contig_1	Pyrodigal	CDS	2264293	2265201	.	-	0	ID=GCA000160335_02244;Name=AEC family transporter;locus_tag=GCA000160335_02244;product=AEC family transporter;gene=yfdV;Parent=GCA000160335_02244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0679,COG:R,RefSeq:WP_000139200.1,SO:0001217,UniParc:UPI00003B18AD,UniRef:UniRef100_A0AAJ4YYF4,UniRef:UniRef50_Q2FVZ8,UniRef:UniRef90_Q2FVZ8
contig_1	Pyrodigal	gene	2265334	2265498	.	+	.	ID=GCA000160335_02245_gene;locus_tag=GCA000160335_02245
contig_1	Pyrodigal	CDS	2265334	2265498	.	+	0	ID=GCA000160335_02245;Name=SE1832 family protein;locus_tag=GCA000160335_02245;product=SE1832 family protein;Parent=GCA000160335_02245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000051210.1,SO:0001217,UniParc:UPI00000D7798,UniRef:UniRef100_A0A090LUF7,UniRef:UniRef50_Q2FVZ7,UniRef:UniRef90_Q2FVZ7
contig_1	Pyrodigal	gene	2265743	2266060	.	+	.	ID=GCA000160335_02246_gene;locus_tag=GCA000160335_02246;gene=mspA
contig_1	Pyrodigal	CDS	2265743	2266060	.	+	0	ID=GCA000160335_02246;Name=membrane stabilizing protein MspA;locus_tag=GCA000160335_02246;product=membrane stabilizing protein MspA;Dbxref=GO:0016020;gene=mspA;Parent=GCA000160335_02246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001161085.1,SO:0001217,UniParc:UPI00000D76DA,UniRef:UniRef100_Q2FVZ6,UniRef:UniRef50_Q2FVZ6,UniRef:UniRef90_Q2FVZ6
contig_1	Pyrodigal	gene	2266247	2269414	.	-	.	ID=GCA000160335_02247_gene;locus_tag=GCA000160335_02247;gene=acrB
contig_1	Pyrodigal	CDS	2266247	2269414	.	-	0	ID=GCA000160335_02247;Name=Efflux RND transporter permease subunit;locus_tag=GCA000160335_02247;product=Efflux RND transporter permease subunit;gene=acrB;Parent=GCA000160335_02247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_000592291.1,SO:0001217,UniParc:UPI00019F4C7E,UniRef:UniRef100_A0A7Z7W2S5,UniRef:UniRef50_Q2FVZ5,UniRef:UniRef90_Q2FVZ5
contig_1	Pyrodigal	gene	2269531	2270796	.	-	.	ID=GCA000160335_02248_gene;locus_tag=GCA000160335_02248;gene=femX
contig_1	Pyrodigal	CDS	2269531	2270796	.	-	0	ID=GCA000160335_02248;Name=lipid II:glycine glycyltransferase;locus_tag=GCA000160335_02248;product=lipid II:glycine glycyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femX;Parent=GCA000160335_02248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413865,COG:COG2348,COG:M,KEGG:K11693,RefSeq:WP_000413875.1,SO:0001217,UniParc:UPI00003B18AF,UniRef:UniRef100_Q6GEH2,UniRef:UniRef50_Q2FVZ4,UniRef:UniRef90_Q2FVZ4;ec_number=2.3.2.16
contig_1	Pyrodigal	gene	2271185	2271436	.	+	.	ID=GCA000160335_02249_gene;locus_tag=GCA000160335_02249
contig_1	Pyrodigal	CDS	2271185	2271436	.	+	0	ID=GCA000160335_02249;Name=Membrane protein;locus_tag=GCA000160335_02249;product=Membrane protein;Parent=GCA000160335_02249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573526.1,SO:0001217,UniParc:UPI00003B18B0,UniRef:UniRef100_A0A7Z7W3N0,UniRef:UniRef50_Q2FVZ3,UniRef:UniRef90_Q2FVZ3
contig_1	Pyrodigal	gene	2271428	2272192	.	-	.	ID=GCA000160335_02250_gene;locus_tag=GCA000160335_02250
contig_1	Pyrodigal	CDS	2271428	2272192	.	-	0	ID=GCA000160335_02250;Name=Glyoxalase-like domain-containing protein;locus_tag=GCA000160335_02250;product=Glyoxalase-like domain-containing protein;Parent=GCA000160335_02250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000600967.1,SO:0001217,UniParc:UPI00000546E8,UniRef:UniRef100_Q2FVZ2,UniRef:UniRef50_Q2FVZ2,UniRef:UniRef90_Q2FVZ2
contig_1	Pyrodigal	gene	2272355	2272795	.	+	.	ID=GCA000160335_02251_gene;locus_tag=GCA000160335_02251;gene=marR
contig_1	Pyrodigal	CDS	2272355	2272795	.	+	0	ID=GCA000160335_02251;Name=putative HTH-type transcriptional regulator SA2060;locus_tag=GCA000160335_02251;product=putative HTH-type transcriptional regulator SA2060;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=marR;Parent=GCA000160335_02251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000951069.1,SO:0001217,UniParc:UPI00003B18B1,UniRef:UniRef100_Q6GEG9,UniRef:UniRef50_Q6GEG9,UniRef:UniRef90_Q6GEG9
contig_1	Pyrodigal	gene	2272788	2273999	.	+	.	ID=GCA000160335_02252_gene;locus_tag=GCA000160335_02252;gene=araJ
contig_1	Pyrodigal	CDS	2272788	2273999	.	+	0	ID=GCA000160335_02252;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_02252;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000160335_02252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000184409.1,SO:0001217,UniParc:UPI00003B18B2,UniRef:UniRef100_A0A7Z7R063,UniRef:UniRef50_Q2FVZ0,UniRef:UniRef90_Q2FVZ0
contig_1	Pyrodigal	gene	2274101	2274451	.	-	.	ID=GCA000160335_02253_gene;locus_tag=GCA000160335_02253;gene=sarV
contig_1	Pyrodigal	CDS	2274101	2274451	.	-	0	ID=GCA000160335_02253;Name=HTH-type transcriptional regulator SarV;locus_tag=GCA000160335_02253;product=HTH-type transcriptional regulator SarV;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarV;Parent=GCA000160335_02253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066900,COG:COG1846,COG:K,RefSeq:WP_000066900.1,SO:0001217,UniParc:UPI0000054708,UniRef:UniRef100_Q2FVY9,UniRef:UniRef50_Q2FVY9,UniRef:UniRef90_Q2FVY9
contig_1	Infernal	gene	2274704	2274951	.	+	.	ID=GCA000160335_02254_gene;locus_tag=GCA000160335_02254;gene=S35
contig_1	Infernal	ncRNA	2274704	2274951	1.9e-21	+	.	ID=GCA000160335_02254;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02254;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02254_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2275143	2276165	.	-	.	ID=GCA000160335_02255_gene;locus_tag=GCA000160335_02255;gene=moaA
contig_1	Pyrodigal	CDS	2275143	2276165	.	-	0	ID=GCA000160335_02255;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000160335_02255;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000160335_02255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230171.1,SO:0001217,UniParc:UPI00003B18B3,UniRef:UniRef100_Q6GEG6,UniRef:UniRef50_Q49ZI6,UniRef:UniRef90_Q931G4;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	2276185	2276784	.	-	.	ID=GCA000160335_02256_gene;locus_tag=GCA000160335_02256;gene=mobA
contig_1	Pyrodigal	CDS	2276185	2276784	.	-	0	ID=GCA000160335_02256;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA000160335_02256;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0005525,GO:0005737,GO:0006777,GO:0046872,GO:0061603;gene=mobA;Parent=GCA000160335_02256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_000643983.1,SO:0001217,UniParc:UPI0001B700FB,UniRef:UniRef100_UPI0001B700FB,UniRef:UniRef50_Q5HLY0,UniRef:UniRef90_Q2FVY4;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	2276791	2277024	.	-	.	ID=GCA000160335_02257_gene;locus_tag=GCA000160335_02257;gene=moaD
contig_1	Pyrodigal	CDS	2276791	2277024	.	-	0	ID=GCA000160335_02257;Name=molybdopterin converting factor subunit 1;locus_tag=GCA000160335_02257;product=molybdopterin converting factor subunit 1;Dbxref=GO:0000166,GO:0003824,GO:0006777,GO:1990133;gene=moaD;Parent=GCA000160335_02257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_000866973.1,SO:0001217,UniParc:UPI00003B18B4,UniRef:UniRef100_A0A7Z7R0D0,UniRef:UniRef50_Q7A441,UniRef:UniRef90_Q7A441
contig_1	Pyrodigal	gene	2277030	2277476	.	-	.	ID=GCA000160335_02258_gene;locus_tag=GCA000160335_02258;gene=moaE
contig_1	Pyrodigal	CDS	2277030	2277476	.	-	0	ID=GCA000160335_02258;Name=Molybdopterin synthase catalytic subunit;locus_tag=GCA000160335_02258;product=Molybdopterin synthase catalytic subunit;Dbxref=GO:0006777,GO:0030366;gene=moaE;Parent=GCA000160335_02258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,KEGG:K03635,RefSeq:WP_000808500.1,SO:0001217,UniParc:UPI0000054752,UniRef:UniRef100_Q5HDT6,UniRef:UniRef50_Q9K8I7,UniRef:UniRef90_P65400;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	2277490	2277975	.	-	.	ID=GCA000160335_02259_gene;locus_tag=GCA000160335_02259;gene=mobB
contig_1	Pyrodigal	CDS	2277490	2277975	.	-	0	ID=GCA000160335_02259;Name=molybdopterin-guanine dinucleotide biosynthesis protein B;locus_tag=GCA000160335_02259;product=molybdopterin-guanine dinucleotide biosynthesis protein B;Dbxref=GO:0003824,GO:0005525,GO:0006777;gene=mobB;Parent=GCA000160335_02259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_000602935.1,SO:0001217,UniParc:UPI0001B700FC,UniRef:UniRef100_UPI0001B700FC,UniRef:UniRef50_A0A380H3I1,UniRef:UniRef90_A0A0U1MRQ4
contig_1	Pyrodigal	gene	2277972	2279231	.	-	.	ID=GCA000160335_02260_gene;locus_tag=GCA000160335_02260;gene=glp
contig_1	Pyrodigal	CDS	2277972	2279231	.	-	0	ID=GCA000160335_02260;Name=gephyrin-like molybdotransferase Glp;locus_tag=GCA000160335_02260;product=gephyrin-like molybdotransferase Glp;Dbxref=GO:0005829,GO:0006777,GO:0046872,GO:0061599,GO:1990586;gene=glp;Parent=GCA000160335_02260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0303,COG:H,RefSeq:WP_000259735.1,SO:0001217,UniParc:UPI0001B700FD,UniRef:UniRef100_UPI0001B700FD,UniRef:UniRef50_P65407,UniRef:UniRef90_P65407;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	2279294	2279788	.	+	.	ID=GCA000160335_02261_gene;locus_tag=GCA000160335_02261;gene=moaC
contig_1	Pyrodigal	CDS	2279294	2279788	.	+	0	ID=GCA000160335_02261;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000160335_02261;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000160335_02261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,RefSeq:WP_000134529.1,SO:0001217,UniParc:UPI00003B18B7,UniRef:UniRef100_Q6GEG0,UniRef:UniRef50_Q2FVX9,UniRef:UniRef90_Q2FVX9;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	2279790	2280296	.	-	.	ID=GCA000160335_02262_gene;locus_tag=GCA000160335_02262;gene=moaB
contig_1	Pyrodigal	CDS	2279790	2280296	.	-	0	ID=GCA000160335_02262;Name=Molybdenum cofactor biosynthesis protein B;locus_tag=GCA000160335_02262;product=Molybdenum cofactor biosynthesis protein B;Dbxref=GO:0005829,GO:0006777;gene=moaB;Parent=GCA000160335_02262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_000503824.1,SO:0001217,UniParc:UPI00003B18B8,UniRef:UniRef100_Q6GEF9,UniRef:UniRef50_Q9ZIN3,UniRef:UniRef90_P65406
contig_1	Pyrodigal	gene	2280325	2281329	.	-	.	ID=GCA000160335_02263_gene;locus_tag=GCA000160335_02263;gene=thiF
contig_1	Pyrodigal	CDS	2280325	2281329	.	-	0	ID=GCA000160335_02263;Name=THIF-type NAD/FAD binding fold domain-containing protein;locus_tag=GCA000160335_02263;product=THIF-type NAD/FAD binding fold domain-containing protein;gene=thiF;Parent=GCA000160335_02263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_000076914.1,SO:0001217,UniParc:UPI00003B18B9,UniRef:UniRef100_A0A7Z7W2D9,UniRef:UniRef50_A0A380C5E9,UniRef:UniRef90_Q2FVX7
contig_1	Pyrodigal	gene	2281497	2282102	.	-	.	ID=GCA000160335_02264_gene;locus_tag=GCA000160335_02264;gene=modC
contig_1	Pyrodigal	CDS	2281497	2282102	.	-	0	ID=GCA000160335_02264;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000160335_02264;product=ATP-binding cassette domain-containing protein;gene=modC;Parent=GCA000160335_02264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_000913006.1,SO:0001217,UniParc:UPI00003B18BA,UniRef:UniRef100_A0A7Z7W3N4,UniRef:UniRef50_A0A380G6T3,UniRef:UniRef90_A0A390QQI7
contig_1	Pyrodigal	gene	2282103	2282774	.	-	.	ID=GCA000160335_02265_gene;locus_tag=GCA000160335_02265;gene=modB
contig_1	Pyrodigal	CDS	2282103	2282774	.	-	0	ID=GCA000160335_02265;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000160335_02265;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015412,GO:0015689,GO:0055052;gene=modB;Parent=GCA000160335_02265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_001113086.1,SO:0001217,UniParc:UPI00019F4C7C,UniRef:UniRef100_A0A7Z7R0C7,UniRef:UniRef50_A0AAJ4SFQ7,UniRef:UniRef90_A0A0E8HNL7
contig_1	Pyrodigal	gene	2282788	2283570	.	-	.	ID=GCA000160335_02266_gene;locus_tag=GCA000160335_02266;gene=modA
contig_1	Pyrodigal	CDS	2282788	2283570	.	-	0	ID=GCA000160335_02266;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000160335_02266;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015412,GO:0015689,GO:0030288,GO:0030973,GO:0055052;gene=modA;Parent=GCA000160335_02266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_000782739.1,SO:0001217,UniParc:UPI00003B18BC,UniRef:UniRef100_A0A166PFD1,UniRef:UniRef50_Q4L8E3,UniRef:UniRef90_A0A0U1MSA4
contig_1	Pyrodigal	gene	2283860	2284657	.	+	.	ID=GCA000160335_02267_gene;locus_tag=GCA000160335_02267;gene=fdhD
contig_1	Pyrodigal	CDS	2283860	2284657	.	+	0	ID=GCA000160335_02267;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000160335_02267;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0009061,GO:0009326,GO:0015942,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000160335_02267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_001030828.1,SO:0001217,UniParc:UPI00019F4E65,UniRef:UniRef100_A0A229LZV4,UniRef:UniRef50_P64120,UniRef:UniRef90_P64120
contig_1	Pyrodigal	gene	2284828	2285598	.	-	.	ID=GCA000160335_02268_gene;locus_tag=GCA000160335_02268
contig_1	Pyrodigal	CDS	2284828	2285598	.	-	0	ID=GCA000160335_02268;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02268;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_02268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000018337.1,SO:0001217,UniParc:UPI00003B18BE,UniRef:UniRef100_A0A7Z7R073,UniRef:UniRef50_Q2FVX2,UniRef:UniRef90_Q2FVX2
contig_1	Pyrodigal	gene	2285670	2286224	.	-	.	ID=GCA000160335_02269_gene;locus_tag=GCA000160335_02269;gene=bioY
contig_1	Pyrodigal	CDS	2285670	2286224	.	-	0	ID=GCA000160335_02269;Name=Biotin transporter;locus_tag=GCA000160335_02269;product=Biotin transporter;gene=bioY;Parent=GCA000160335_02269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1268,COG:H,KEGG:K03523,RefSeq:WP_000208740.1,SO:0001217,UniParc:UPI00003B18BF,UniRef:UniRef100_A0A7Z7R0A3,UniRef:UniRef50_A0A0E7RMI7,UniRef:UniRef90_A0A0E7RMI7
contig_1	Pyrodigal	gene	2286345	2287286	.	-	.	ID=GCA000160335_02270_gene;locus_tag=GCA000160335_02270;gene=uRH1
contig_1	Pyrodigal	CDS	2286345	2287286	.	-	0	ID=GCA000160335_02270;Name=Purine nucleosidase;locus_tag=GCA000160335_02270;product=Purine nucleosidase;gene=uRH1;Parent=GCA000160335_02270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000163414.1,SO:0001217,UniParc:UPI00003B18C0,UniRef:UniRef100_A0A7Z7R0K3,UniRef:UniRef50_A0A2S6DCG5,UniRef:UniRef90_A0A2S6DCG5
contig_1	Pyrodigal	gene	2287685	2288530	.	-	.	ID=GCA000160335_02271_gene;locus_tag=GCA000160335_02271;gene=fepB
contig_1	Pyrodigal	CDS	2287685	2288530	.	-	0	ID=GCA000160335_02271;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000160335_02271;product=Fe/B12 periplasmic-binding domain-containing protein;gene=fepB;Parent=GCA000160335_02271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,SO:0001217,UniRef:UniRef50_A0A0S4MA85,UniRef:UniRef90_Q2FVW9
contig_1	Pyrodigal	gene	2288807	2289979	.	-	.	ID=GCA000160335_02272_gene;locus_tag=GCA000160335_02272;gene=caiA
contig_1	Pyrodigal	CDS	2288807	2289979	.	-	0	ID=GCA000160335_02272;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000160335_02272;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000160335_02272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,SO:0001217,UniRef:UniRef50_A0A380FY69,UniRef:UniRef90_A0A380DW78
contig_1	Pyrodigal	gene	2290176	2291081	.	-	.	ID=GCA000160335_02273_gene;locus_tag=GCA000160335_02273;gene=yut
contig_1	Pyrodigal	CDS	2290176	2291081	.	-	0	ID=GCA000160335_02273;Name=urea transporter;locus_tag=GCA000160335_02273;product=urea transporter;Dbxref=GO:0015204,GO:0015840,GO:0016020;gene=yut;Parent=GCA000160335_02273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4413,COG:E,RefSeq:WP_001573532.1,SO:0001217,UniParc:UPI00003B18C4,UniRef:UniRef100_A0AAJ4YWZ9,UniRef:UniRef50_A0A0H3KEG3,UniRef:UniRef90_A0A0H3KEG3
contig_1	Pyrodigal	gene	2291341	2291643	.	+	.	ID=GCA000160335_02274_gene;locus_tag=GCA000160335_02274;gene=ureA
contig_1	Pyrodigal	CDS	2291341	2291643	.	+	0	ID=GCA000160335_02274;Name=urease subunit gamma;locus_tag=GCA000160335_02274;product=urease subunit gamma;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0043419;gene=ureA;Parent=GCA000160335_02274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0831,COG:E,RefSeq:WP_000545928.1,SO:0001217,UniParc:UPI00000D77A0,UniRef:UniRef100_Q2FVW5,UniRef:UniRef50_Q89UG3,UniRef:UniRef90_Q2FVW5;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2291657	2292067	.	+	.	ID=GCA000160335_02275_gene;locus_tag=GCA000160335_02275;gene=ureB
contig_1	Pyrodigal	CDS	2291657	2292067	.	+	0	ID=GCA000160335_02275;Name=urease subunit beta;locus_tag=GCA000160335_02275;product=urease subunit beta;Dbxref=GO:0009039,GO:0035550,GO:0043419;gene=ureB;Parent=GCA000160335_02275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0832,COG:E,RefSeq:WP_000612132.1,SO:0001217,UniParc:UPI00003B18C5,UniRef:UniRef100_Q6GEE5,UniRef:UniRef50_Q4A0J4,UniRef:UniRef90_Q2YYQ7;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2292064	2293779	.	+	.	ID=GCA000160335_02276_gene;locus_tag=GCA000160335_02276;gene=ureC
contig_1	Pyrodigal	CDS	2292064	2293779	.	+	0	ID=GCA000160335_02276;Name=urease subunit alpha;locus_tag=GCA000160335_02276;product=urease subunit alpha;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0019627,GO:0043419;gene=ureC;Parent=GCA000160335_02276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0804,COG:E,RefSeq:WP_000008680.1,SO:0001217,UniParc:UPI0001B700FE,UniRef:UniRef100_UPI0001B700FE,UniRef:UniRef50_P17086,UniRef:UniRef90_Q2G2K5;ec_number=3.5.1.5
contig_1	Infernal	gene	2292215	2292517	.	-	.	ID=GCA000160335_02277_gene;locus_tag=GCA000160335_02277;gene=5_ureB_sRNA
contig_1	Infernal	ncRNA	2292215	2292517	2.2e-09	-	.	ID=GCA000160335_02277;Name=5' ureB small RNA;locus_tag=GCA000160335_02277;product=5' ureB small RNA;Dbxref=RFAM:RF02514;Parent=GCA000160335_02277_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02514
contig_1	Pyrodigal	gene	2293792	2294244	.	+	.	ID=GCA000160335_02278_gene;locus_tag=GCA000160335_02278;gene=ureE
contig_1	Pyrodigal	CDS	2293792	2294244	.	+	0	ID=GCA000160335_02278;Name=urease accessory protein UreE;locus_tag=GCA000160335_02278;product=urease accessory protein UreE;Dbxref=GO:0005737,GO:0006457,GO:0016151,GO:0019627,GO:0051082,GO:0065003;gene=ureE;Parent=GCA000160335_02278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2371,COG:O,RefSeq:WP_000634592.1,SO:0001217,UniParc:UPI00003B18C7,UniRef:UniRef100_Q6GEE3,UniRef:UniRef50_Q2G2K8,UniRef:UniRef90_Q2G2K8
contig_1	Pyrodigal	gene	2294237	2294926	.	+	.	ID=GCA000160335_02279_gene;locus_tag=GCA000160335_02279;gene=ureF
contig_1	Pyrodigal	CDS	2294237	2294926	.	+	0	ID=GCA000160335_02279;Name=Urease accessory protein UreF;locus_tag=GCA000160335_02279;product=Urease accessory protein UreF;Dbxref=GO:0005737,GO:0016151;gene=ureF;Parent=GCA000160335_02279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0830,COG:O,RefSeq:WP_000565259.1,SO:0001217,UniParc:UPI00019F4E62,UniRef:UniRef100_A0A7Z7W2E6,UniRef:UniRef50_Q2G2K7,UniRef:UniRef90_Q2G2K7
contig_1	Pyrodigal	gene	2294939	2295553	.	+	.	ID=GCA000160335_02280_gene;locus_tag=GCA000160335_02280;gene=ureG
contig_1	Pyrodigal	CDS	2294939	2295553	.	+	0	ID=GCA000160335_02280;Name=urease accessory protein UreG;locus_tag=GCA000160335_02280;product=urease accessory protein UreG;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872;gene=ureG;Parent=GCA000160335_02280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K03189,RefSeq:WP_000002973.1,SO:0001217,UniParc:UPI00000CAABE,UniRef:UniRef100_Q2G273,UniRef:UniRef50_P18319,UniRef:UniRef90_Q2G273
contig_1	Pyrodigal	gene	2295553	2296389	.	+	.	ID=GCA000160335_02281_gene;locus_tag=GCA000160335_02281;gene=ureD
contig_1	Pyrodigal	CDS	2295553	2296389	.	+	0	ID=GCA000160335_02281;Name=Urease accessory protein UreD;locus_tag=GCA000160335_02281;product=Urease accessory protein UreD;Dbxref=GO:0005737,GO:0016151;gene=ureD;Parent=GCA000160335_02281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0829,COG:O,RefSeq:WP_000344352.1,SO:0001217,UniParc:UPI0000054834,UniRef:UniRef100_Q2G272,UniRef:UniRef50_Q2G272,UniRef:UniRef90_Q2G272
contig_1	Infernal	gene	2296442	2296526	.	-	.	ID=GCA000160335_02282_gene;locus_tag=GCA000160335_02282;gene=tsr33
contig_1	Infernal	ncRNA	2296442	2296526	2.9e-17	-	.	ID=GCA000160335_02282;Name=S. aureus tsr33 small RNA;locus_tag=GCA000160335_02282;product=S. aureus tsr33 small RNA;Dbxref=RFAM:RF02582;Parent=GCA000160335_02282_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02582
contig_1	Pyrodigal	gene	2296578	2296925	.	-	.	ID=GCA000160335_02283_gene;locus_tag=GCA000160335_02283;gene=sarR
contig_1	Pyrodigal	CDS	2296578	2296925	.	-	0	ID=GCA000160335_02283;Name=HTH-type transcriptional regulator SarR;locus_tag=GCA000160335_02283;product=HTH-type transcriptional regulator SarR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0008643,GO:0015144,GO:0055085;gene=sarR;Parent=GCA000160335_02283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000036076,RefSeq:WP_000036076.1,SO:0001217,UniParc:UPI00000D7855,UniRef:UniRef100_Q9F0R1,UniRef:UniRef50_P0AEX9,UniRef:UniRef90_Q9F0R1;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	2297353	2297679	.	-	.	ID=GCA000160335_02284_gene;locus_tag=GCA000160335_02284
contig_1	Pyrodigal	CDS	2297353	2297679	.	-	0	ID=GCA000160335_02284;Name=YokE-like PH domain-containing protein;locus_tag=GCA000160335_02284;product=YokE-like PH domain-containing protein;Parent=GCA000160335_02284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000599586.1,SO:0001217,UniParc:UPI00003B18C9,UniRef:UniRef100_A0A7Z7R082,UniRef:UniRef50_Q2G270,UniRef:UniRef90_Q2G270
contig_1	Pyrodigal	gene	2297743	2298486	.	-	.	ID=GCA000160335_02285_gene;locus_tag=GCA000160335_02285
contig_1	Pyrodigal	CDS	2297743	2298486	.	-	0	ID=GCA000160335_02285;Name=Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein;locus_tag=GCA000160335_02285;product=Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein;Parent=GCA000160335_02285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000032840.1,SO:0001217,UniParc:UPI00003B18CA,UniRef:UniRef100_A0A7Z7R085,UniRef:UniRef50_Q2G2J5,UniRef:UniRef90_Q2G2J5
contig_1	Pyrodigal	gene	2298512	2299588	.	-	.	ID=GCA000160335_02286_gene;locus_tag=GCA000160335_02286;pseudogene=unitary
contig_1	Pyrodigal	CDS	2298512	2299588	.	-	0	ID=GCA000160335_02286;Name=helix-turn-helix transcriptional regulator;locus_tag=GCA000160335_02286;product=helix-turn-helix transcriptional regulator;pseudogene=unitary;Parent=GCA000160335_02286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X2JR81,UniRef:UniRef90_UPI001248E444
contig_1	Pyrodigal	gene	2299672	2300466	.	-	.	ID=GCA000160335_02287_gene;locus_tag=GCA000160335_02287;pseudogene=unitary
contig_1	Pyrodigal	CDS	2299672	2300466	.	-	0	ID=GCA000160335_02287;Name=helix-turn-helix transcriptional regulator;locus_tag=GCA000160335_02287;product=helix-turn-helix transcriptional regulator;pseudogene=unitary;Parent=GCA000160335_02287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001156E1F9,UniRef:UniRef90_UPI0013DDBCA9
contig_1	Pyrodigal	gene	2301076	2301885	.	+	.	ID=GCA000160335_02288_gene;locus_tag=GCA000160335_02288;gene=ssaA2
contig_1	Pyrodigal	CDS	2301076	2301885	.	+	0	ID=GCA000160335_02288;Name=Staphylococcal secretory antigen ssaA2;locus_tag=GCA000160335_02288;product=Staphylococcal secretory antigen ssaA2;Dbxref=GO:0005576;gene=ssaA2;Parent=GCA000160335_02288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000717395.1,SO:0001217,UniParc:UPI00019CD758,UniRef:UniRef100_A0A7Z7R0L4,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2G2J2
contig_1	Infernal	gene	2301886	2302321	.	+	.	ID=GCA000160335_02289_gene;locus_tag=GCA000160335_02289;gene=Teg23
contig_1	Infernal	ncRNA	2301886	2302321	1.6e-60	+	.	ID=GCA000160335_02289;Name=S. aureus Teg23 small RNA;locus_tag=GCA000160335_02289;product=S. aureus Teg23 small RNA;Dbxref=RFAM:RF02583;Parent=GCA000160335_02289_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02583
contig_1	Pyrodigal	gene	2302322	2303719	.	-	.	ID=GCA000160335_02290_gene;locus_tag=GCA000160335_02290;gene=nhaC
contig_1	Pyrodigal	CDS	2302322	2303719	.	-	0	ID=GCA000160335_02290;Name=Na+/H+ antiporter NhaC;locus_tag=GCA000160335_02290;product=Na+/H+ antiporter NhaC;Dbxref=GO:0006814,GO:0015297,GO:0015385,GO:0016020,GO:1902600;gene=nhaC;Parent=GCA000160335_02290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K03315,SO:0001217,UniRef:UniRef50_A0A291JHU7,UniRef:UniRef90_A0A0E1XBW8
contig_1	Pyrodigal	gene	2303817	2304899	.	-	.	ID=GCA000160335_02291_gene;locus_tag=GCA000160335_02291;gene=gpsA
contig_1	Pyrodigal	CDS	2303817	2304899	.	-	0	ID=GCA000160335_02291;Name=6-phosphogluconate dehydrogenase%2C decarboxylating;locus_tag=GCA000160335_02291;product=6-phosphogluconate dehydrogenase%2C decarboxylating;gene=gpsA;Parent=GCA000160335_02291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,KEGG:K04940,RefSeq:WP_000684568.1,SO:0001217,UniParc:UPI00003B18CF,UniRef:UniRef100_A0A7Z7R0F6,UniRef:UniRef50_A0A7Z7QNB8,UniRef:UniRef90_A0A077UKH6;ec_number=1.5.1.28
contig_1	Pyrodigal	gene	2305147	2305569	.	+	.	ID=GCA000160335_02292_gene;locus_tag=GCA000160335_02292;gene=tic20a
contig_1	Pyrodigal	CDS	2305147	2305569	.	+	0	ID=GCA000160335_02292;Name=DUF4870 domain-containing protein;locus_tag=GCA000160335_02292;product=DUF4870 domain-containing protein;gene=tic20a;Parent=GCA000160335_02292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3296,COG:R,KEGG:K09940,RefSeq:WP_000206106.1,SO:0001217,UniParc:UPI00003B18D0,UniRef:UniRef100_A0A7Z7R1A0,UniRef:UniRef50_Q2G1V8,UniRef:UniRef90_Q2G1V8
contig_1	Pyrodigal	gene	2305806	2306306	.	+	.	ID=GCA000160335_02293_gene;locus_tag=GCA000160335_02293;gene=ssaA
contig_1	Pyrodigal	CDS	2305806	2306306	.	+	0	ID=GCA000160335_02293;Name=Secretory antigen SsaA;locus_tag=GCA000160335_02293;product=Secretory antigen SsaA;gene=ssaA;Parent=GCA000160335_02293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000737699.1,SO:0001217,UniParc:UPI00019F4E60,UniRef:UniRef100_A0A2S6DCI1,UniRef:UniRef50_A0A2I7YA24,UniRef:UniRef90_A0A2I7YA24
contig_1	Pyrodigal	gene	2306665	2307618	.	+	.	ID=GCA000160335_02294_gene;locus_tag=GCA000160335_02294;gene=ldhA
contig_1	Pyrodigal	CDS	2306665	2307618	.	+	0	ID=GCA000160335_02294;Name=Putative 2-hydroxyacid dehydrogenase MW2224;locus_tag=GCA000160335_02294;product=Putative 2-hydroxyacid dehydrogenase MW2224;Dbxref=GO:0016616,GO:0051287;gene=ldhA;Parent=GCA000160335_02294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000417008.1,SO:0001217,UniParc:UPI00003B18D2,UniRef:UniRef100_Q6GEC9,UniRef:UniRef50_Q2FVW4,UniRef:UniRef90_Q2FVW4;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2307710	2308834	.	-	.	ID=GCA000160335_02295_gene;locus_tag=GCA000160335_02295;gene=ubiH
contig_1	Pyrodigal	CDS	2307710	2308834	.	-	0	ID=GCA000160335_02295;Name=Salicylate hydroxylase;locus_tag=GCA000160335_02295;product=Salicylate hydroxylase;gene=ubiH;Parent=GCA000160335_02295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_000684154.1,SO:0001217,UniParc:UPI00003B18D3,UniRef:UniRef100_A0A7Z7W2K4,UniRef:UniRef50_A0A380C5V0,UniRef:UniRef90_A0A2K4AFY1
contig_1	Infernal	gene	2309030	2309345	.	-	.	ID=GCA000160335_02296_gene;locus_tag=GCA000160335_02296;gene=S35
contig_1	Infernal	ncRNA	2309030	2309345	1e-26	-	.	ID=GCA000160335_02296;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02296;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02296_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2309443	2310219	.	-	.	ID=GCA000160335_02297_gene;locus_tag=GCA000160335_02297;gene=lytD
contig_1	Pyrodigal	CDS	2309443	2310219	.	-	0	ID=GCA000160335_02297;Name=Autolysin;locus_tag=GCA000160335_02297;product=Autolysin;gene=lytD;Parent=GCA000160335_02297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_000739235.1,SO:0001217,UniParc:UPI00003B18D4,UniRef:UniRef100_A0A170I2K6,UniRef:UniRef50_A0A170I2K6,UniRef:UniRef90_A0A170I2K6
contig_1	Pyrodigal	gene	2310241	2310474	.	-	.	ID=GCA000160335_02298_gene;locus_tag=GCA000160335_02298
contig_1	Pyrodigal	CDS	2310241	2310474	.	-	0	ID=GCA000160335_02298;Name=Group-Specific protein;locus_tag=GCA000160335_02298;product=Group-Specific protein;Parent=GCA000160335_02298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000921246.1,SO:0001217,UniParc:UPI000069AB4E,UniRef:UniRef100_Q2FVW1,UniRef:UniRef50_A0A640MZA9,UniRef:UniRef90_Q2FVW1
contig_1	Pyrodigal	gene	2310768	2311241	.	-	.	ID=GCA000160335_02299_gene;locus_tag=GCA000160335_02299;gene=forE
contig_1	Pyrodigal	CDS	2310768	2311241	.	-	0	ID=GCA000160335_02299;Name=DUF1641 domain-containing protein;locus_tag=GCA000160335_02299;product=DUF1641 domain-containing protein;gene=forE;Parent=GCA000160335_02299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2427,RefSeq:WP_000840812.1,SO:0001217,UniParc:UPI00003B18D5,UniRef:UniRef100_A0A7Z7W3P6,UniRef:UniRef50_Q2FVW0,UniRef:UniRef90_Q2FVW0
contig_1	Pyrodigal	gene	2311241	2314195	.	-	.	ID=GCA000160335_02300_gene;locus_tag=GCA000160335_02300;gene=fdhF
contig_1	Pyrodigal	CDS	2311241	2314195	.	-	0	ID=GCA000160335_02300;Name=formate dehydrogenase subunit alpha;locus_tag=GCA000160335_02300;product=formate dehydrogenase subunit alpha;Dbxref=GO:0003954,GO:0008863,GO:0009326,GO:0015942,GO:0016020,GO:0022904,GO:0043546,GO:0046872,GO:0051537,GO:0051539;gene=fdhF;Parent=GCA000160335_02300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3383,RefSeq:WP_001155271.1,SO:0001217,UniParc:UPI00019CD754,UniRef:UniRef100_A0A7Z7R0E1,UniRef:UniRef50_Q49ZN0,UniRef:UniRef90_Q99RW4;ec_number=1.17.1.9
contig_1	Pyrodigal	gene	2314797	2315744	.	-	.	ID=GCA000160335_02301_gene;locus_tag=GCA000160335_02301;gene=cps2a
contig_1	Pyrodigal	CDS	2314797	2315744	.	-	0	ID=GCA000160335_02301;Name=LytR family transcriptional regulator;locus_tag=GCA000160335_02301;product=LytR family transcriptional regulator;gene=cps2a;Parent=GCA000160335_02301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000831057.1,SO:0001217,UniParc:UPI0003173E48,UniRef:UniRef100_UPI0003173E48,UniRef:UniRef50_A0A640MZN0,UniRef:UniRef90_A0A077UH28;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2315877	2316674	.	-	.	ID=GCA000160335_02302_gene;locus_tag=GCA000160335_02302;gene=suhB
contig_1	Pyrodigal	CDS	2315877	2316674	.	-	0	ID=GCA000160335_02302;Name=Inositol monophosphatase family protein;locus_tag=GCA000160335_02302;product=Inositol monophosphatase family protein;gene=suhB;Parent=GCA000160335_02302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,RefSeq:WP_000130451.1,SO:0001217,UniParc:UPI00003B18D7,UniRef:UniRef100_A0A7Z7R089,UniRef:UniRef50_Q2FVV7,UniRef:UniRef90_Q2FVV7
contig_1	Infernal	gene	2316768	2316911	.	-	.	ID=GCA000160335_02303_gene;locus_tag=GCA000160335_02303;gene=RsaOG
contig_1	Infernal	ncRNA	2316768	2316911	7e-23	-	.	ID=GCA000160335_02303;Name=RNA S.aureus Orsay G;locus_tag=GCA000160335_02303;product=RNA S.aureus Orsay G;Dbxref=RFAM:RF01775;Parent=GCA000160335_02303_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01775
contig_1	Pyrodigal	gene	2317059	2317751	.	+	.	ID=GCA000160335_02304_gene;locus_tag=GCA000160335_02304;gene=yobV
contig_1	Pyrodigal	CDS	2317059	2317751	.	+	0	ID=GCA000160335_02304;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000160335_02304;product=HTH deoR-type domain-containing protein;gene=yobV;Parent=GCA000160335_02304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2378,COG:K,RefSeq:WP_001030125.1,SO:0001217,UniParc:UPI00000D7807,UniRef:UniRef100_Q2FVV6,UniRef:UniRef50_Q2FVV6,UniRef:UniRef90_Q2FVV6
contig_1	Pyrodigal	gene	2317776	2318513	.	-	.	ID=GCA000160335_02305_gene;locus_tag=GCA000160335_02305;gene=sdpB
contig_1	Pyrodigal	CDS	2317776	2318513	.	-	0	ID=GCA000160335_02305;Name=CPBP family intramembrane metalloprotease SdpB;locus_tag=GCA000160335_02305;product=CPBP family intramembrane metalloprotease SdpB;gene=sdpB;Parent=GCA000160335_02305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000426696,COG:COG1266,COG:O,RefSeq:WP_000426695.1,SO:0001217,UniParc:UPI00003B18D8,UniRef:UniRef100_A0A7Z7R0B8,UniRef:UniRef50_Q2FVV4,UniRef:UniRef90_Q2FVV4
contig_1	Pyrodigal	gene	2318562	2318891	.	+	.	ID=GCA000160335_02306_gene;locus_tag=GCA000160335_02306
contig_1	Pyrodigal	CDS	2318562	2318891	.	+	0	ID=GCA000160335_02306;Name=hypothetical protein;locus_tag=GCA000160335_02306;product=hypothetical protein;Parent=GCA000160335_02306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000606724.1,SO:0001217,UniParc:UPI00003B18D9,UniRef:UniRef100_A0A7Z7R0M4,UniRef:UniRef50_A0A6B1RKM0,UniRef:UniRef90_A0A6B1RKM0
contig_1	Pyrodigal	gene	2319336	2320208	.	+	.	ID=GCA000160335_02307_gene;locus_tag=GCA000160335_02307;gene=rpiR
contig_1	Pyrodigal	CDS	2319336	2320208	.	+	0	ID=GCA000160335_02307;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000160335_02307;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000160335_02307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000073195.1,SO:0001217,UniParc:UPI00000D7730,UniRef:UniRef100_Q2FVV2,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2FVV2
contig_1	Pyrodigal	gene	2320591	2321970	.	-	.	ID=GCA000160335_02308_gene;locus_tag=GCA000160335_02308;gene=ansP
contig_1	Pyrodigal	CDS	2320591	2321970	.	-	0	ID=GCA000160335_02308;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000160335_02308;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000160335_02308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000429675.1,SO:0001217,UniParc:UPI00003B18DA,UniRef:UniRef100_A0A7Z7R0G5,UniRef:UniRef50_P27837,UniRef:UniRef90_Q2FVV1
contig_1	Pyrodigal	gene	2322250	2322606	.	+	.	ID=GCA000160335_02309_gene;locus_tag=GCA000160335_02309
contig_1	Pyrodigal	CDS	2322250	2322606	.	+	0	ID=GCA000160335_02309;Name=Membrane protein;locus_tag=GCA000160335_02309;product=Membrane protein;Parent=GCA000160335_02309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000917674.1,SO:0001217,UniParc:UPI00003B18DB,UniRef:UniRef100_A0A7Z7R1A9,UniRef:UniRef50_A0A640MZ73,UniRef:UniRef90_Q2FVV0
contig_1	Pyrodigal	gene	2322603	2322788	.	+	.	ID=GCA000160335_02310_gene;locus_tag=GCA000160335_02310
contig_1	Pyrodigal	CDS	2322603	2322788	.	+	0	ID=GCA000160335_02310;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000160335_02310;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000160335_02310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205307.1,SO:0001217,UniParc:UPI00000549F6,UniRef:UniRef100_Q2FVU9,UniRef:UniRef50_Q2FVU9,UniRef:UniRef90_Q2FVU9
contig_1	Pyrodigal	gene	2322884	2323072	.	-	.	ID=GCA000160335_02311_gene;locus_tag=GCA000160335_02311
contig_1	Pyrodigal	CDS	2322884	2323072	.	-	0	ID=GCA000160335_02311;Name=Putative membrane protein;locus_tag=GCA000160335_02311;product=Putative membrane protein;Parent=GCA000160335_02311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002505424,UniRef:UniRef100_A0A7Z7W2G3,UniRef:UniRef50_A0A1E5TKE9,UniRef:UniRef90_A0A7U7JRB1
contig_1	Pyrodigal	gene	2323086	2323721	.	-	.	ID=GCA000160335_02312_gene;locus_tag=GCA000160335_02312;gene=ycjU
contig_1	Pyrodigal	CDS	2323086	2323721	.	-	0	ID=GCA000160335_02312;Name=HAD family hydrolase;locus_tag=GCA000160335_02312;product=HAD family hydrolase;gene=ycjU;Parent=GCA000160335_02312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000285452.1,SO:0001217,UniParc:UPI00003B18DD,UniRef:UniRef100_A0A7Z7W2K8,UniRef:UniRef50_Q2FVU7,UniRef:UniRef90_Q2FVU7
contig_1	Pyrodigal	gene	2323796	2324713	.	-	.	ID=GCA000160335_02313_gene;locus_tag=GCA000160335_02313;gene=yfeH
contig_1	Pyrodigal	CDS	2323796	2324713	.	-	0	ID=GCA000160335_02313;Name=Bile acid:sodium symporter family protein;locus_tag=GCA000160335_02313;product=Bile acid:sodium symporter family protein;gene=yfeH;Parent=GCA000160335_02313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0385,COG:R,KEGG:K03453,RefSeq:WP_000486805.1,SO:0001217,UniParc:UPI0001B702D6,UniRef:UniRef100_UPI0001B702D6,UniRef:UniRef50_Q2FVU6,UniRef:UniRef90_Q2FVU6
contig_1	Pyrodigal	gene	2324981	2325511	.	+	.	ID=GCA000160335_02314_gene;locus_tag=GCA000160335_02314
contig_1	Pyrodigal	CDS	2324981	2325511	.	+	0	ID=GCA000160335_02314;Name=Homing endonuclease LAGLIDADG domain-containing protein;locus_tag=GCA000160335_02314;product=Homing endonuclease LAGLIDADG domain-containing protein;Parent=GCA000160335_02314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000904065.1,SO:0001217,UniParc:UPI00000D765D,UniRef:UniRef100_Q2FVU5,UniRef:UniRef50_A0A974KZR7,UniRef:UniRef90_Q2FVU5
contig_1	Pyrodigal	gene	2325577	2327181	.	-	.	ID=GCA000160335_02315_gene;locus_tag=GCA000160335_02315;gene=ptsG2
contig_1	Pyrodigal	CDS	2325577	2327181	.	-	0	ID=GCA000160335_02315;Name=Alpha-glucoside-specific PTS transporter subunit IIBC;locus_tag=GCA000160335_02315;product=Alpha-glucoside-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000160335_02315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02750,RefSeq:WP_000991495.1,SO:0001217,UniParc:UPI00003B18DE,UniRef:UniRef100_A0A7Z7W3R7,UniRef:UniRef50_P31452,UniRef:UniRef90_A0A2W3AI92;ec_number=2.7.1.208
contig_1	Pyrodigal	gene	2327512	2328276	.	+	.	ID=GCA000160335_02316_gene;locus_tag=GCA000160335_02316;gene=rpiR
contig_1	Pyrodigal	CDS	2327512	2328276	.	+	0	ID=GCA000160335_02316;Name=RpiR family transcriptional regulator;locus_tag=GCA000160335_02316;product=RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000160335_02316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000477997.1,SO:0001217,UniParc:UPI00003B18DF,UniRef:UniRef100_A0A7Z7R0F4,UniRef:UniRef50_A0A0D1GF60,UniRef:UniRef90_A0A0D1GF60
contig_1	Pyrodigal	gene	2328334	2328840	.	-	.	ID=GCA000160335_02317_gene;locus_tag=GCA000160335_02317;gene=yndB
contig_1	Pyrodigal	CDS	2328334	2328840	.	-	0	ID=GCA000160335_02317;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000160335_02317;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000160335_02317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_001051558.1,SO:0001217,UniParc:UPI00003B18E0,UniRef:UniRef100_A0A7Z7R0Y5,UniRef:UniRef50_Q2FVU2,UniRef:UniRef90_Q2FVU2
contig_1	Pyrodigal	gene	2329010	2330320	.	-	.	ID=GCA000160335_02318_gene;locus_tag=GCA000160335_02318;gene=nhaC
contig_1	Pyrodigal	CDS	2329010	2330320	.	-	0	ID=GCA000160335_02318;Name=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;locus_tag=GCA000160335_02318;product=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;gene=nhaC;Parent=GCA000160335_02318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,RefSeq:WP_000451830.1,SO:0001217,UniParc:UPI0001C0B534,UniRef:UniRef100_A0A0E1XE31,UniRef:UniRef50_G5JKB9,UniRef:UniRef90_G5JKB9
contig_1	Infernal	regulatory_region	2330397	2330492	2.5e-14	-	.	ID=HBCHLJIIAO_157;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2330545	2331114	.	-	.	ID=GCA000160335_02319_gene;locus_tag=GCA000160335_02319
contig_1	Pyrodigal	CDS	2330545	2331114	.	-	0	ID=GCA000160335_02319;Name=Membrane spanning protein;locus_tag=GCA000160335_02319;product=Membrane spanning protein;Parent=GCA000160335_02319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001185204.1,SO:0001217,UniParc:UPI00003B18E2,UniRef:UniRef100_A0A7Z7R099,UniRef:UniRef50_A0A5S9I5V4,UniRef:UniRef90_A0A7Z7R099
contig_1	Pyrodigal	gene	2331601	2332482	.	-	.	ID=GCA000160335_02320_gene;locus_tag=GCA000160335_02320;gene=fabG
contig_1	Pyrodigal	CDS	2331601	2332482	.	-	0	ID=GCA000160335_02320;Name=SDR family oxidoreductase;locus_tag=GCA000160335_02320;product=SDR family oxidoreductase;gene=fabG;Parent=GCA000160335_02320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000730056.1,SO:0001217,UniParc:UPI00003B18E3,UniRef:UniRef100_A0A7Z7R0C8,UniRef:UniRef50_D5DPI1,UniRef:UniRef90_Q2FVT8
contig_1	Pyrodigal	gene	2332593	2333714	.	-	.	ID=GCA000160335_02321_gene;locus_tag=GCA000160335_02321;gene=abgB
contig_1	Pyrodigal	CDS	2332593	2333714	.	-	0	ID=GCA000160335_02321;Name=Amidohydrolase;locus_tag=GCA000160335_02321;product=Amidohydrolase;gene=abgB;Parent=GCA000160335_02321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_000523140.1,SO:0001217,UniParc:UPI0001B7012B,UniRef:UniRef100_A0A2X2M4G4,UniRef:UniRef50_A0A0E7Q410,UniRef:UniRef90_A0A0E7Q410
contig_1	Pyrodigal	gene	2333989	2335227	.	-	.	ID=GCA000160335_02322_gene;locus_tag=GCA000160335_02322;gene=hutI
contig_1	Pyrodigal	CDS	2333989	2335227	.	-	0	ID=GCA000160335_02322;Name=imidazolonepropionase;locus_tag=GCA000160335_02322;product=imidazolonepropionase;Dbxref=GO:0005506,GO:0005737,GO:0008270,GO:0016812,GO:0019556,GO:0019557,GO:0050480;gene=hutI;Parent=GCA000160335_02322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1228,COG:Q,KEGG:K01468,RefSeq:WP_000998771.1,SO:0001217,UniParc:UPI0001B7012C,UniRef:UniRef100_UPI0001B7012C,UniRef:UniRef50_Q2FVT6,UniRef:UniRef90_Q2FVT6;ec_number=3.5.2.7
contig_1	Pyrodigal	gene	2335227	2336888	.	-	.	ID=GCA000160335_02323_gene;locus_tag=GCA000160335_02323;gene=hutU
contig_1	Pyrodigal	CDS	2335227	2336888	.	-	0	ID=GCA000160335_02323;Name=urocanate hydratase;locus_tag=GCA000160335_02323;product=urocanate hydratase;Dbxref=GO:0005737,GO:0006548,GO:0016153,GO:0019556,GO:0019557;gene=hutU;Parent=GCA000160335_02323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2987,COG:E,KEGG:K01712,RefSeq:WP_001226814.1,SO:0001217,UniParc:UPI0001B7012D,UniRef:UniRef100_UPI0001B7012D,UniRef:UniRef50_Q8XW28,UniRef:UniRef90_Q931G1;ec_number=4.2.1.49
contig_1	Pyrodigal	gene	2337048	2337932	.	+	.	ID=GCA000160335_02324_gene;locus_tag=GCA000160335_02324;gene=lysR
contig_1	Pyrodigal	CDS	2337048	2337932	.	+	0	ID=GCA000160335_02324;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000160335_02324;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000160335_02324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000691837.1,SO:0001217,UniParc:UPI00003B18E6,UniRef:UniRef100_A0A7Z7R1B8,UniRef:UniRef50_Q2FVT4,UniRef:UniRef90_Q2FVT4
contig_1	Pyrodigal	gene	2338234	2338653	.	+	.	ID=GCA000160335_02325_gene;locus_tag=GCA000160335_02325;gene=fosB
contig_1	Pyrodigal	CDS	2338234	2338653	.	+	0	ID=GCA000160335_02325;Name=FosB/FosD family fosfomycin resistance bacillithiol transferase;locus_tag=GCA000160335_02325;product=FosB/FosD family fosfomycin resistance bacillithiol transferase;Dbxref=GO:0000287,GO:0005737,GO:0016765,GO:0046677;gene=fosB;Parent=GCA000160335_02325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,KEGG:K11210,NCBIProtein:WP_000920239.1,RefSeq:WP_000920241.1,SO:0001217,UniParc:UPI00003B18E7,UniRef:UniRef100_Q6GEA2,UniRef:UniRef50_Q81RK2,UniRef:UniRef90_Q2FVT3;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	2338909	2339844	.	-	.	ID=GCA000160335_02326_gene;locus_tag=GCA000160335_02326;gene=hutG
contig_1	Pyrodigal	CDS	2338909	2339844	.	-	0	ID=GCA000160335_02326;Name=formimidoylglutamase;locus_tag=GCA000160335_02326;product=formimidoylglutamase;Dbxref=GO:0008783,GO:0019556,GO:0019557,GO:0030145,GO:0033389,GO:0050415;gene=hutG;Parent=GCA000160335_02326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01479,RefSeq:WP_000277982.1,SO:0001217,UniParc:UPI00003B18E8,UniRef:UniRef100_Q6GEA1,UniRef:UniRef50_Q2FVT2,UniRef:UniRef90_Q2FVT2;ec_number=3.5.3.8
contig_1	Pyrodigal	gene	2340122	2341381	.	+	.	ID=GCA000160335_02327_gene;locus_tag=GCA000160335_02327;gene=sdpC
contig_1	Pyrodigal	CDS	2340122	2341381	.	+	0	ID=GCA000160335_02327;Name=CPBP family intramembrane metalloprotease SdpC;locus_tag=GCA000160335_02327;product=CPBP family intramembrane metalloprotease SdpC;Dbxref=GO:0004222,GO:0005886,GO:0071586;gene=sdpC;Parent=GCA000160335_02327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000794443,COG:COG1266,COG:O,RefSeq:WP_000794463.1,SO:0001217,UniParc:UPI0001B7012E,UniRef:UniRef100_UPI0001B7012E,UniRef:UniRef50_Q2FVT1,UniRef:UniRef90_Q2FVT1
contig_1	Pyrodigal	gene	2341447	2342133	.	-	.	ID=GCA000160335_02328_gene;locus_tag=GCA000160335_02328;gene=rpiA
contig_1	Pyrodigal	CDS	2341447	2342133	.	-	0	ID=GCA000160335_02328;Name=ribose 5-phosphate isomerase A;locus_tag=GCA000160335_02328;product=ribose 5-phosphate isomerase A;Dbxref=GO:0004751,GO:0005829,GO:0006014,GO:0009052;gene=rpiA;Parent=GCA000160335_02328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,RefSeq:WP_000655867.1,SO:0001217,UniParc:UPI00003B18EA,UniRef:UniRef100_Q6GE99,UniRef:UniRef50_Q5HLQ9,UniRef:UniRef90_P66694;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	2342304	2342957	.	+	.	ID=GCA000160335_02329_gene;locus_tag=GCA000160335_02329;gene=yiiM
contig_1	Pyrodigal	CDS	2342304	2342957	.	+	0	ID=GCA000160335_02329;Name=MOSC domain-containing protein;locus_tag=GCA000160335_02329;product=MOSC domain-containing protein;gene=yiiM;Parent=GCA000160335_02329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2258,COG:FV,RefSeq:WP_000623445.1,SO:0001217,UniParc:UPI00003B18EB,UniRef:UniRef100_A0AA43V2Y2,UniRef:UniRef50_Q5HLQ8,UniRef:UniRef90_Q2FVS9
contig_1	Pyrodigal	gene	2343193	2344212	.	-	.	ID=GCA000160335_02330_gene;locus_tag=GCA000160335_02330;gene=galM
contig_1	Pyrodigal	CDS	2343193	2344212	.	-	0	ID=GCA000160335_02330;Name=Aldose 1-epimerase;locus_tag=GCA000160335_02330;product=Aldose 1-epimerase;gene=galM;Parent=GCA000160335_02330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_000634691.1,SO:0001217,UniParc:UPI00019CD6E2,UniRef:UniRef100_A0A0E1XBX0,UniRef:UniRef50_A0A0D6XRD3,UniRef:UniRef90_A0A2S6DDQ6
contig_1	Pyrodigal	gene	2344242	2344568	.	-	.	ID=GCA000160335_02331_gene;locus_tag=GCA000160335_02331;gene=ynfA
contig_1	Pyrodigal	CDS	2344242	2344568	.	-	0	ID=GCA000160335_02331;Name=YnfA family protein;locus_tag=GCA000160335_02331;product=YnfA family protein;Dbxref=GO:0005886,GO:0016020;gene=ynfA;Parent=GCA000160335_02331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1742,COG:R,RefSeq:WP_000966697.1,SO:0001217,UniParc:UPI00003B18ED,UniRef:UniRef100_Q6GE96,UniRef:UniRef50_O31553,UniRef:UniRef90_Q2FVS6
contig_1	Pyrodigal	gene	2344786	2346018	.	-	.	ID=GCA000160335_02332_gene;locus_tag=GCA000160335_02332;gene=natB
contig_1	Pyrodigal	CDS	2344786	2346018	.	-	0	ID=GCA000160335_02332;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000160335_02332;product=ABC-2 type transporter transmembrane domain-containing protein;gene=natB;Parent=GCA000160335_02332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1668,COG:CP,RefSeq:WP_000548698.1,SO:0001217,UniParc:UPI00003B18EE,UniRef:UniRef100_A0A7Z7R0A8,UniRef:UniRef50_Q2FVS4,UniRef:UniRef90_Q2FVS4
contig_1	Pyrodigal	gene	2346011	2346910	.	-	.	ID=GCA000160335_02333_gene;locus_tag=GCA000160335_02333;gene=yhaQ
contig_1	Pyrodigal	CDS	2346011	2346910	.	-	0	ID=GCA000160335_02333;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_02333;product=ABC transporter domain-containing protein;gene=yhaQ;Parent=GCA000160335_02333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4152,COG:R,RefSeq:WP_000524841.1,SO:0001217,UniParc:UPI00019F4E45,UniRef:UniRef100_A0A7Z7R0D8,UniRef:UniRef50_Q2FVS3,UniRef:UniRef90_Q2FVS3
contig_1	Pyrodigal	gene	2347143	2347790	.	-	.	ID=GCA000160335_02334_gene;locus_tag=GCA000160335_02334;gene=yhaH
contig_1	Pyrodigal	CDS	2347143	2347790	.	-	0	ID=GCA000160335_02334;Name=DUF805 domain-containing protein;locus_tag=GCA000160335_02334;product=DUF805 domain-containing protein;gene=yhaH;Parent=GCA000160335_02334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_000436832.1,SO:0001217,UniParc:UPI00003B18F0,UniRef:UniRef100_A0A0E1XBW6,UniRef:UniRef50_Q2FVS2,UniRef:UniRef90_Q2FVS2
contig_1	Pyrodigal	gene	2348189	2348797	.	+	.	ID=GCA000160335_02335_gene;locus_tag=GCA000160335_02335;gene=mpg
contig_1	Pyrodigal	CDS	2348189	2348797	.	+	0	ID=GCA000160335_02335;Name=Putative 3-methyladenine DNA glycosylase;locus_tag=GCA000160335_02335;product=Putative 3-methyladenine DNA glycosylase;Dbxref=GO:0003677,GO:0003905,GO:0006284;gene=mpg;Parent=GCA000160335_02335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2094,COG:L,RefSeq:WP_000348297.1,SO:0001217,UniParc:UPI00005FE770,UniRef:UniRef100_Q2YYZ2,UniRef:UniRef50_Q2FVS1,UniRef:UniRef90_Q2FVS1;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	2349133	2350341	.	+	.	ID=GCA000160335_02336_gene;locus_tag=GCA000160335_02336;gene=gltS
contig_1	Pyrodigal	CDS	2349133	2350341	.	+	0	ID=GCA000160335_02336;Name=sodium/glutamate symporter;locus_tag=GCA000160335_02336;product=sodium/glutamate symporter;Dbxref=GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA000160335_02336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,KEGG:K03312,RefSeq:WP_000571584.1,SO:0001217,UniParc:UPI00003B18F4,UniRef:UniRef100_Q2FVS0,UniRef:UniRef50_A0A380G4D5,UniRef:UniRef90_A0A390UCJ6
contig_1	Pyrodigal	gene	2350389	2351438	.	-	.	ID=GCA000160335_02337_gene;locus_tag=GCA000160335_02337;gene=fni
contig_1	Pyrodigal	CDS	2350389	2351438	.	-	0	ID=GCA000160335_02337;Name=type 2 isopentenyl-diphosphate Delta-isomerase;locus_tag=GCA000160335_02337;product=type 2 isopentenyl-diphosphate Delta-isomerase;Dbxref=GO:0000287,GO:0004452,GO:0005737,GO:0008299,GO:0010181,GO:0016491,GO:0070402;gene=fni;Parent=GCA000160335_02337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_001279385.1,SO:0001217,UniParc:UPI00003B18F5,UniRef:UniRef100_Q6GE88,UniRef:UniRef50_Q2FVR9,UniRef:UniRef90_Q2FVR9;ec_number=5.3.3.2
contig_1	Pyrodigal	gene	2351469	2352416	.	-	.	ID=GCA000160335_02338_gene;locus_tag=GCA000160335_02338;gene=corA
contig_1	Pyrodigal	CDS	2351469	2352416	.	-	0	ID=GCA000160335_02338;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000160335_02338;product=magnesium/cobalt transporter CorA;Dbxref=GO:0006824,GO:0015087,GO:0015095,GO:0015693,GO:0016020;gene=corA;Parent=GCA000160335_02338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_001229250.1,SO:0001217,UniParc:UPI00003B18F6,UniRef:UniRef100_A0A7Z7R1A1,UniRef:UniRef50_A0A2I7YA74,UniRef:UniRef90_A0A2I7YA74
contig_1	Pyrodigal	gene	2352513	2353004	.	+	.	ID=GCA000160335_02339_gene;locus_tag=GCA000160335_02339;gene=fadM
contig_1	Pyrodigal	CDS	2352513	2353004	.	+	0	ID=GCA000160335_02339;Name=Thioesterase;locus_tag=GCA000160335_02339;product=Thioesterase;gene=fadM;Parent=GCA000160335_02339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000234803.1,SO:0001217,UniParc:UPI00003B18F7,UniRef:UniRef100_A0A0E1XBW2,UniRef:UniRef50_Q2FVR7,UniRef:UniRef90_Q2FVR7
contig_1	Pyrodigal	gene	2353001	2353420	.	+	.	ID=GCA000160335_02340_gene;locus_tag=GCA000160335_02340
contig_1	Pyrodigal	CDS	2353001	2353420	.	+	0	ID=GCA000160335_02340;Name=Phage protein;locus_tag=GCA000160335_02340;product=Phage protein;Parent=GCA000160335_02340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000128656.1,SO:0001217,UniParc:UPI0000054A1B,UniRef:UniRef100_Q2G2W6,UniRef:UniRef50_A0A7X9WGR3,UniRef:UniRef90_Q2G2W6
contig_1	Pyrodigal	gene	2353528	2354448	.	-	.	ID=GCA000160335_02341_gene;locus_tag=GCA000160335_02341;gene=aes
contig_1	Pyrodigal	CDS	2353528	2354448	.	-	0	ID=GCA000160335_02341;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000160335_02341;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000160335_02341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000620864.1,SO:0001217,UniParc:UPI00000CAD49,UniRef:UniRef100_Q2G2W3,UniRef:UniRef50_Q2G2W3,UniRef:UniRef90_Q2G2W3
contig_1	Pyrodigal	gene	2354656	2355294	.	+	.	ID=GCA000160335_02342_gene;locus_tag=GCA000160335_02342
contig_1	Pyrodigal	CDS	2354656	2355294	.	+	0	ID=GCA000160335_02342;Name=ABC transporter permease;locus_tag=GCA000160335_02342;product=ABC transporter permease;Parent=GCA000160335_02342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184221.1,SO:0001217,UniParc:UPI0001B7012F,UniRef:UniRef100_UPI0001B7012F,UniRef:UniRef50_A0A1S2MLM7,UniRef:UniRef90_Q2G2W2
contig_1	Pyrodigal	gene	2355540	2357477	.	-	.	ID=GCA000160335_02343_gene;locus_tag=GCA000160335_02343;gene=araJ
contig_1	Pyrodigal	CDS	2355540	2357477	.	-	0	ID=GCA000160335_02343;Name=Quinolone resistance protein NorB;locus_tag=GCA000160335_02343;product=Quinolone resistance protein NorB;gene=araJ;Parent=GCA000160335_02343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_000213898.1,SO:0001217,UniParc:UPI00003B18F9,UniRef:UniRef100_A0A166EK79,UniRef:UniRef50_Q9F0Z1,UniRef:UniRef90_Q9F0Z1
contig_1	Pyrodigal	gene	2357490	2358137	.	-	.	ID=GCA000160335_02344_gene;locus_tag=GCA000160335_02344;gene=emrA
contig_1	Pyrodigal	CDS	2357490	2358137	.	-	0	ID=GCA000160335_02344;Name=Membrane fusion protein biotin-lipoyl like domain-containing protein;locus_tag=GCA000160335_02344;product=Membrane fusion protein biotin-lipoyl like domain-containing protein;gene=emrA;Parent=GCA000160335_02344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_000738244.1,SO:0001217,UniParc:UPI00003B18FA,UniRef:UniRef100_A0A7Z7R103,UniRef:UniRef50_Q2G2W5,UniRef:UniRef90_Q2G2W5
contig_1	Pyrodigal	gene	2358258	2358812	.	+	.	ID=GCA000160335_02345_gene;locus_tag=GCA000160335_02345;gene=acrR
contig_1	Pyrodigal	CDS	2358258	2358812	.	+	0	ID=GCA000160335_02345;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000160335_02345;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000160335_02345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000828572.1,SO:0001217,UniParc:UPI00003B18FB,UniRef:UniRef100_A0A7Z7R0C5,UniRef:UniRef50_Q2G2W4,UniRef:UniRef90_Q2G2W4
contig_1	Pyrodigal	gene	2358903	2359133	.	-	.	ID=GCA000160335_02346_gene;locus_tag=GCA000160335_02346
contig_1	Pyrodigal	CDS	2358903	2359133	.	-	0	ID=GCA000160335_02346;Name=Transposase;locus_tag=GCA000160335_02346;product=Transposase;Parent=GCA000160335_02346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019F4E43,UniRef:UniRef100_A0A7Z7R0C0,UniRef:UniRef50_Q4L5A1,UniRef:UniRef90_A0A7Z7R0C0
contig_1	Infernal	gene	2359170	2359407	.	+	.	ID=GCA000160335_02347_gene;locus_tag=GCA000160335_02347;gene=tsr24
contig_1	Infernal	ncRNA	2359170	2359407	7.7e-40	+	.	ID=GCA000160335_02347;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_02347;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_02347_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2359568	2360776	.	-	.	ID=GCA000160335_02348_gene;locus_tag=GCA000160335_02348;gene=araJ
contig_1	Pyrodigal	CDS	2359568	2360776	.	-	0	ID=GCA000160335_02348;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000160335_02348;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000160335_02348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_000999130.1,SO:0001217,UniParc:UPI00003B18FC,UniRef:UniRef100_A0A7Z7R0E8,UniRef:UniRef50_Q9F4G1,UniRef:UniRef90_Q9F4G1
contig_1	Pyrodigal	gene	2361044	2362426	.	-	.	ID=GCA000160335_02349_gene;locus_tag=GCA000160335_02349;gene=tcaA
contig_1	Pyrodigal	CDS	2361044	2362426	.	-	0	ID=GCA000160335_02349;Name=Membrane-associated protein TcaA;locus_tag=GCA000160335_02349;product=Membrane-associated protein TcaA;Dbxref=GO:0005886,GO:0046677,GO:0046872;gene=tcaA;Parent=GCA000160335_02349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4640,COG:S,KEGG:K21463,RefSeq:WP_000833805.1,SO:0001217,UniParc:UPI00003B18FD,UniRef:UniRef100_Q6GE78,UniRef:UniRef50_Q5HDJ9,UniRef:UniRef90_Q5HDJ9
contig_1	Pyrodigal	gene	2362666	2363121	.	-	.	ID=GCA000160335_02350_gene;locus_tag=GCA000160335_02350;gene=tcaR
contig_1	Pyrodigal	CDS	2362666	2363121	.	-	0	ID=GCA000160335_02350;Name=HTH-type transcriptional regulator TcaR;locus_tag=GCA000160335_02350;product=HTH-type transcriptional regulator TcaR;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=tcaR;Parent=GCA000160335_02350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K21454,RefSeq:WP_000238542.1,SO:0001217,UniParc:UPI00000D778A,UniRef:UniRef100_Q9F4G3,UniRef:UniRef50_Q9F4G3,UniRef:UniRef90_Q9F4G3
contig_1	Pyrodigal	gene	2363316	2364284	.	+	.	ID=GCA000160335_02351_gene;locus_tag=GCA000160335_02351;gene=elyC
contig_1	Pyrodigal	CDS	2363316	2364284	.	+	0	ID=GCA000160335_02351;Name=DUF218 domain-containing protein;locus_tag=GCA000160335_02351;product=DUF218 domain-containing protein;gene=elyC;Parent=GCA000160335_02351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_001573541.1,SO:0001217,UniParc:UPI00003B18FE,UniRef:UniRef100_A0A7Z7R0J3,UniRef:UniRef50_Q2FVR4,UniRef:UniRef90_Q2FVR4
contig_1	Pyrodigal	gene	2364514	2365179	.	-	.	ID=GCA000160335_02352_gene;locus_tag=GCA000160335_02352;gene=hrtA
contig_1	Pyrodigal	CDS	2364514	2365179	.	-	0	ID=GCA000160335_02352;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000160335_02352;product=Putative hemin import ATP-binding protein HrtA;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857;gene=hrtA;Parent=GCA000160335_02352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_001229922.1,SO:0001217,UniParc:UPI00003B18FF,UniRef:UniRef100_Q6GE75,UniRef:UniRef50_Q99RR8,UniRef:UniRef90_Q99RR8;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2365179	2366234	.	-	.	ID=GCA000160335_02353_gene;locus_tag=GCA000160335_02353;gene=hrtB
contig_1	Pyrodigal	CDS	2365179	2366234	.	-	0	ID=GCA000160335_02353;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000160335_02353;product=Putative hemin transport system permease protein HrtB;Dbxref=GO:0005886;gene=hrtB;Parent=GCA000160335_02353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09813,RefSeq:WP_000761409.1,SO:0001217,UniParc:UPI00003B1900,UniRef:UniRef100_Q6GE74,UniRef:UniRef50_Q2FVR0,UniRef:UniRef90_Q2FVR0
contig_1	Pyrodigal	gene	2366370	2367044	.	+	.	ID=GCA000160335_02354_gene;locus_tag=GCA000160335_02354;gene=hssR
contig_1	Pyrodigal	CDS	2366370	2367044	.	+	0	ID=GCA000160335_02354;Name=DNA-binding heme response regulator HssR;locus_tag=GCA000160335_02354;product=DNA-binding heme response regulator HssR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=hssR;Parent=GCA000160335_02354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000249498,COG:COG0745,COG:TK,RefSeq:WP_000249492.1,SO:0001217,UniParc:UPI00003B1901,UniRef:UniRef100_Q6GE73,UniRef:UniRef50_Q2FVQ9,UniRef:UniRef90_Q2FVQ9
contig_1	Pyrodigal	gene	2367037	2368410	.	+	.	ID=GCA000160335_02355_gene;locus_tag=GCA000160335_02355;gene=hssS
contig_1	Pyrodigal	CDS	2367037	2368410	.	+	0	ID=GCA000160335_02355;Name=heme sensor histidine kinase HssS;locus_tag=GCA000160335_02355;product=heme sensor histidine kinase HssS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hssS;Parent=GCA000160335_02355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000477337,COG:COG0642,COG:T,RefSeq:WP_000477323.1,SO:0001217,UniParc:UPI00019F4E2E,UniRef:UniRef100_A0A7Z7W2M3,UniRef:UniRef50_Q2FVQ8,UniRef:UniRef90_Q2FVQ8;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2368573	2369016	.	+	.	ID=GCA000160335_02356_gene;locus_tag=GCA000160335_02356;gene=lytTR
contig_1	Pyrodigal	CDS	2368573	2369016	.	+	0	ID=GCA000160335_02356;Name=putative HTH-type transcriptional regulator MW2284;locus_tag=GCA000160335_02356;product=putative HTH-type transcriptional regulator MW2284;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytTR;Parent=GCA000160335_02356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3289,COG:K,RefSeq:WP_000977031.1,SO:0001217,UniParc:UPI00003B1903,UniRef:UniRef100_Q6GE71,UniRef:UniRef50_Q2FVQ7,UniRef:UniRef90_Q2FVQ7
contig_1	Pyrodigal	gene	2369013	2369468	.	+	.	ID=GCA000160335_02357_gene;locus_tag=GCA000160335_02357
contig_1	Pyrodigal	CDS	2369013	2369468	.	+	0	ID=GCA000160335_02357;Name=DUF3021 domain-containing protein;locus_tag=GCA000160335_02357;product=DUF3021 domain-containing protein;Parent=GCA000160335_02357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000793166.1,SO:0001217,UniParc:UPI00003B1904,UniRef:UniRef100_A0A7Z7W2G8,UniRef:UniRef50_Q2FVQ6,UniRef:UniRef90_Q2FVQ6
contig_1	Pyrodigal	gene	2369645	2370208	.	-	.	ID=GCA000160335_02358_gene;locus_tag=GCA000160335_02358;gene=tetR
contig_1	Pyrodigal	CDS	2369645	2370208	.	-	0	ID=GCA000160335_02358;Name=TetR family transcriptional regulator;locus_tag=GCA000160335_02358;product=TetR family transcriptional regulator;gene=tetR;Parent=GCA000160335_02358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000372857.1,SO:0001217,UniParc:UPI00003B1905,UniRef:UniRef100_A0A0E1XBR3,UniRef:UniRef50_A0A0U1MTA1,UniRef:UniRef90_A0A6B1RUK1
contig_1	Pyrodigal	gene	2370342	2371070	.	+	.	ID=GCA000160335_02359_gene;locus_tag=GCA000160335_02359
contig_1	Pyrodigal	CDS	2370342	2371070	.	+	0	ID=GCA000160335_02359;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_02359;product=ABC transporter ATP-binding protein;Parent=GCA000160335_02359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000388430.1,SO:0001217,UniParc:UPI0001B70148,UniRef:UniRef100_UPI0001B70148,UniRef:UniRef50_S2Y1T9,UniRef:UniRef90_A0A380DSZ0
contig_1	Pyrodigal	gene	2371067	2372149	.	+	.	ID=GCA000160335_02360_gene;locus_tag=GCA000160335_02360
contig_1	Pyrodigal	CDS	2371067	2372149	.	+	0	ID=GCA000160335_02360;Name=ABC transporter permease;locus_tag=GCA000160335_02360;product=ABC transporter permease;Parent=GCA000160335_02360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000696073.1,SO:0001217,UniParc:UPI00003B1907,UniRef:UniRef100_A0A7Z7R111,UniRef:UniRef50_A0A3A0VR48,UniRef:UniRef90_A0A077UHL0
contig_1	Pyrodigal	gene	2372276	2373754	.	-	.	ID=GCA000160335_02361_gene;locus_tag=GCA000160335_02361;gene=mqo
contig_1	Pyrodigal	CDS	2372276	2373754	.	-	0	ID=GCA000160335_02361;Name=malate dehydrogenase (quinone);locus_tag=GCA000160335_02361;product=malate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=mqo;Parent=GCA000160335_02361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,RefSeq:WP_000211357.1,SO:0001217,UniParc:UPI00004980EA,UniRef:UniRef100_Q6GE66,UniRef:UniRef50_C5DAE0,UniRef:UniRef90_P65421;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2374135	2375733	.	-	.	ID=GCA000160335_02362_gene;locus_tag=GCA000160335_02362;gene=lldP
contig_1	Pyrodigal	CDS	2374135	2375733	.	-	0	ID=GCA000160335_02362;Name=L-lactate permease;locus_tag=GCA000160335_02362;product=L-lactate permease;gene=lldP;Parent=GCA000160335_02362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,RefSeq:WP_000960862.1,SO:0001217,UniParc:UPI00003B1909,UniRef:UniRef100_A0A7Z7R0D1,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2X2JS03
contig_1	Pyrodigal	gene	2376050	2377723	.	+	.	ID=GCA000160335_02363_gene;locus_tag=GCA000160335_02363;gene=tagB
contig_1	Pyrodigal	CDS	2376050	2377723	.	+	0	ID=GCA000160335_02363;Name=CDP-glycerol glycerophosphotransferase family protein;locus_tag=GCA000160335_02363;product=CDP-glycerol glycerophosphotransferase family protein;gene=tagB;Parent=GCA000160335_02363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_041206591.1,SO:0001217,UniParc:UPI00059B5E57,UniRef:UniRef100_UPI00059B5E57,UniRef:UniRef50_Q2FVQ3,UniRef:UniRef90_Q2FVQ3
contig_1	Pyrodigal	gene	2377877	2378506	.	-	.	ID=GCA000160335_02364_gene;locus_tag=GCA000160335_02364
contig_1	Pyrodigal	CDS	2377877	2378506	.	-	0	ID=GCA000160335_02364;Name=putative lipoprotein SAV2368;locus_tag=GCA000160335_02364;product=putative lipoprotein SAV2368;Dbxref=GO:0005886;Parent=GCA000160335_02364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000737711.1,SO:0001217,UniParc:UPI00003B190B,UniRef:UniRef100_Q6GE63,UniRef:UniRef50_Q2FVQ2,UniRef:UniRef90_Q2FVQ2
contig_1	Pyrodigal	gene	2378822	2379337	.	-	.	ID=GCA000160335_02365_gene;locus_tag=GCA000160335_02365;gene=rimI
contig_1	Pyrodigal	CDS	2378822	2379337	.	-	0	ID=GCA000160335_02365;Name=Protease synthase and sporulation negative regulatory protein PAI 1;locus_tag=GCA000160335_02365;product=Protease synthase and sporulation negative regulatory protein PAI 1;gene=rimI;Parent=GCA000160335_02365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000907329.1,SO:0001217,UniParc:UPI00003B190C,UniRef:UniRef100_A0A7Z7R140,UniRef:UniRef50_A0A0U1MSC1,UniRef:UniRef90_A0A0U1MSC1
contig_1	Pyrodigal	gene	2379527	2380531	.	+	.	ID=GCA000160335_02366_gene;locus_tag=GCA000160335_02366;gene=qor
contig_1	Pyrodigal	CDS	2379527	2380531	.	+	0	ID=GCA000160335_02366;Name=Acryloyl-CoA reductase;locus_tag=GCA000160335_02366;product=Acryloyl-CoA reductase;gene=qor;Parent=GCA000160335_02366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000140783.1,SO:0001217,UniParc:UPI0002CA02D8,UniRef:UniRef100_A0A7Z7R0K5,UniRef:UniRef50_A0A2Y1TSU4,UniRef:UniRef90_A0A2Y1TSU4
contig_1	Pyrodigal	gene	2380756	2380932	.	-	.	ID=GCA000160335_02367_gene;locus_tag=GCA000160335_02367
contig_1	Pyrodigal	CDS	2380756	2380932	.	-	0	ID=GCA000160335_02367;Name=Phage protein;locus_tag=GCA000160335_02367;product=Phage protein;Parent=GCA000160335_02367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000687296.1,SO:0001217,UniParc:UPI0001EFF129,UniRef:UniRef100_A0A7Z7R1F5,UniRef:UniRef50_A0A7U7JR89,UniRef:UniRef90_A0A5S9I5E9
contig_1	Pyrodigal	gene	2381097	2381498	.	-	.	ID=GCA000160335_02368_gene;locus_tag=GCA000160335_02368
contig_1	Pyrodigal	CDS	2381097	2381498	.	-	0	ID=GCA000160335_02368;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02368;product=N-acetyltransferase domain-containing protein;Parent=GCA000160335_02368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000241604.1,SO:0001217,UniParc:UPI00003B190E,UniRef:UniRef100_A0A7Z7R1C3,UniRef:UniRef50_Q2FVP9,UniRef:UniRef90_Q2FVP9
contig_1	Pyrodigal	gene	2381534	2382568	.	-	.	ID=GCA000160335_02369_gene;locus_tag=GCA000160335_02369
contig_1	Pyrodigal	CDS	2381534	2382568	.	-	0	ID=GCA000160335_02369;Name=Ferredoxin--NADP reductase;locus_tag=GCA000160335_02369;product=Ferredoxin--NADP reductase;Dbxref=GO:0004324,GO:0050660,GO:0050661;Parent=GCA000160335_02369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21567,RefSeq:WP_000655979.1,SO:0001217,UniParc:UPI00003B190F,UniRef:UniRef100_Q6GE59,UniRef:UniRef50_Q2FVP8,UniRef:UniRef90_Q2FVP8;ec_number=1.18.1.2
contig_1	Pyrodigal	gene	2382795	2383226	.	-	.	ID=GCA000160335_02370_gene;locus_tag=GCA000160335_02370
contig_1	Pyrodigal	CDS	2382795	2383226	.	-	0	ID=GCA000160335_02370;Name=DUF2871 domain-containing protein;locus_tag=GCA000160335_02370;product=DUF2871 domain-containing protein;Parent=GCA000160335_02370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001253464.1,SO:0001217,UniParc:UPI0000054A38,UniRef:UniRef100_Q2FVP6,UniRef:UniRef50_Q2FVP6,UniRef:UniRef90_Q2FVP6
contig_1	Pyrodigal	gene	2383432	2384709	.	-	.	ID=GCA000160335_02371_gene;locus_tag=GCA000160335_02371;gene=yhgE
contig_1	Pyrodigal	CDS	2383432	2384709	.	-	0	ID=GCA000160335_02371;Name=Membrane protein%2C putative;locus_tag=GCA000160335_02371;product=Membrane protein%2C putative;gene=yhgE;Parent=GCA000160335_02371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_001020012.1,SO:0001217,UniParc:UPI00003B1910,UniRef:UniRef100_A0A7Z7W2W7,UniRef:UniRef50_B9DJT1,UniRef:UniRef90_Q2FVP4
contig_1	Pyrodigal	gene	2384870	2385493	.	+	.	ID=GCA000160335_02372_gene;locus_tag=GCA000160335_02372;gene=acrR
contig_1	Pyrodigal	CDS	2384870	2385493	.	+	0	ID=GCA000160335_02372;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000160335_02372;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000160335_02372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000656768.1,SO:0001217,UniParc:UPI00019CD664,UniRef:UniRef100_A0A7Z7W2H5,UniRef:UniRef50_Q2FVP3,UniRef:UniRef90_Q2FVP3
contig_1	Pyrodigal	gene	2385539	2386483	.	+	.	ID=GCA000160335_02373_gene;locus_tag=GCA000160335_02373;gene=corA
contig_1	Pyrodigal	CDS	2385539	2386483	.	+	0	ID=GCA000160335_02373;Name=Magnesium transporter CorA family protein;locus_tag=GCA000160335_02373;product=Magnesium transporter CorA family protein;gene=corA;Parent=GCA000160335_02373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_000633068.1,SO:0001217,UniParc:UPI0000054A3C,UniRef:UniRef100_Q2FVP2,UniRef:UniRef50_Q2FVP2,UniRef:UniRef90_Q2FVP2
contig_1	Pyrodigal	gene	2386569	2388011	.	-	.	ID=GCA000160335_02374_gene;locus_tag=GCA000160335_02374;gene=ptsG2
contig_1	Pyrodigal	CDS	2386569	2388011	.	-	0	ID=GCA000160335_02374;Name=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;locus_tag=GCA000160335_02374;product=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;gene=ptsG2;Parent=GCA000160335_02374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_001108122.1,SO:0001217,UniParc:UPI00003B1912,UniRef:UniRef100_A0A7Z7R0J6,UniRef:UniRef50_P51184,UniRef:UniRef90_A0A7U7JRC9
contig_1	Pyrodigal	gene	2388194	2388577	.	+	.	ID=GCA000160335_02375_gene;locus_tag=GCA000160335_02375
contig_1	Pyrodigal	CDS	2388194	2388577	.	+	0	ID=GCA000160335_02375;Name=DUF1722 domain-containing protein;locus_tag=GCA000160335_02375;product=DUF1722 domain-containing protein;Parent=GCA000160335_02375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000664357.1,SO:0001217,UniParc:UPI00003B1913,UniRef:UniRef100_A0A7Z7R122,UniRef:UniRef50_A0A0H3JX25,UniRef:UniRef90_A0A0H3JX25
contig_1	Pyrodigal	gene	2390065	2392170	.	+	.	ID=GCA000160335_02376_gene;locus_tag=GCA000160335_02376;gene=rsp
contig_1	Pyrodigal	CDS	2390065	2392170	.	+	0	ID=GCA000160335_02376;Name=AraC family transcriptional regulator Rsp;locus_tag=GCA000160335_02376;product=AraC family transcriptional regulator Rsp;Dbxref=GO:0003700,GO:0006355,GO:0043565;gene=rsp;Parent=GCA000160335_02376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000128367.1,SO:0001217,UniParc:UPI00003B1914,UniRef:UniRef100_A0A0U1MT29,UniRef:UniRef50_A0A0U1MT29,UniRef:UniRef90_A0A0U1MT29
contig_1	Pyrodigal	gene	2392241	2392663	.	+	.	ID=GCA000160335_02377_gene;locus_tag=GCA000160335_02377;gene=yzzA
contig_1	Pyrodigal	CDS	2392241	2392663	.	+	0	ID=GCA000160335_02377;Name=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;locus_tag=GCA000160335_02377;product=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;gene=yzzA;Parent=GCA000160335_02377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3871,COG:S,RefSeq:WP_000071899.1,SO:0001217,UniParc:UPI00003B1915,UniRef:UniRef100_A0A7Z7R0E0,UniRef:UniRef50_Q2FVN7,UniRef:UniRef90_Q2FVN7
contig_1	Pyrodigal	gene	2392941	2393297	.	+	.	ID=GCA000160335_02378_gene;locus_tag=GCA000160335_02378
contig_1	Pyrodigal	CDS	2392941	2393297	.	+	0	ID=GCA000160335_02378;Name=DUF4889 domain-containing protein;locus_tag=GCA000160335_02378;product=DUF4889 domain-containing protein;Parent=GCA000160335_02378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727325.1,SO:0001217,UniParc:UPI00019F4E28,UniRef:UniRef100_A0A7Z7R0G4,UniRef:UniRef50_Q2FVN6,UniRef:UniRef90_Q2FVN6
contig_1	Pyrodigal	gene	2393541	2394818	.	-	.	ID=GCA000160335_02379_gene;locus_tag=GCA000160335_02379;gene=gltP
contig_1	Pyrodigal	CDS	2393541	2394818	.	-	0	ID=GCA000160335_02379;Name=Cation:dicarboxylase symporter family transporter;locus_tag=GCA000160335_02379;product=Cation:dicarboxylase symporter family transporter;gene=gltP;Parent=GCA000160335_02379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1301,KEGG:K11102,RefSeq:WP_001173164.1,SO:0001217,UniParc:UPI00003B1917,UniRef:UniRef100_A0A2X2JWW2,UniRef:UniRef50_Q2FVN5,UniRef:UniRef90_Q2FVN5
contig_1	Pyrodigal	gene	2395000	2395365	.	-	.	ID=GCA000160335_02380_gene;locus_tag=GCA000160335_02380
contig_1	Pyrodigal	CDS	2395000	2395365	.	-	0	ID=GCA000160335_02380;Name=DUF3139 domain-containing protein;locus_tag=GCA000160335_02380;product=DUF3139 domain-containing protein;Parent=GCA000160335_02380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727537.1,SO:0001217,UniParc:UPI0000054770,UniRef:UniRef100_Q2FVN4,UniRef:UniRef50_Q2FVN4,UniRef:UniRef90_Q2FVN4
contig_1	Pyrodigal	gene	2395762	2396208	.	+	.	ID=GCA000160335_02381_gene;locus_tag=GCA000160335_02381;gene=sarZ
contig_1	Pyrodigal	CDS	2395762	2396208	.	+	0	ID=GCA000160335_02381;Name=HTH-type transcriptional regulator SarZ;locus_tag=GCA000160335_02381;product=HTH-type transcriptional regulator SarZ;Dbxref=GO:0003677,GO:0003700,GO:0005737;gene=sarZ;Parent=GCA000160335_02381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000289212.1,SO:0001217,UniParc:UPI00003B1918,UniRef:UniRef100_Q6GE46,UniRef:UniRef50_Q2FVN3,UniRef:UniRef90_Q2FVN3
contig_1	Pyrodigal	gene	2396431	2396853	.	+	.	ID=GCA000160335_02382_gene;locus_tag=GCA000160335_02382
contig_1	Pyrodigal	CDS	2396431	2396853	.	+	0	ID=GCA000160335_02382;Name=Crystallin;locus_tag=GCA000160335_02382;product=Crystallin;Parent=GCA000160335_02382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1919,UniRef:UniRef100_A0A7Z7R1G6,UniRef:UniRef50_Q2FVN2,UniRef:UniRef90_A0A0D1IXM8
contig_1	Pyrodigal	gene	2396961	2398130	.	-	.	ID=GCA000160335_02383_gene;locus_tag=GCA000160335_02383;gene=narT
contig_1	Pyrodigal	CDS	2396961	2398130	.	-	0	ID=GCA000160335_02383;Name=putative nitrate transporter NarT;locus_tag=GCA000160335_02383;product=putative nitrate transporter NarT;Dbxref=GO:0005886,GO:0015112,GO:0042128;gene=narT;Parent=GCA000160335_02383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2223,COG:P,KEGG:K10850,RefSeq:WP_000278556.1,SO:0001217,UniParc:UPI00000CAC34,UniRef:UniRef100_Q99RP1,UniRef:UniRef50_Q2FVN1,UniRef:UniRef90_Q2FVN1
contig_1	Pyrodigal	gene	2398639	2399553	.	+	.	ID=GCA000160335_02384_gene;locus_tag=GCA000160335_02384;gene=yjaZ
contig_1	Pyrodigal	CDS	2398639	2399553	.	+	0	ID=GCA000160335_02384;Name=DUF2268 domain-containing protein;locus_tag=GCA000160335_02384;product=DUF2268 domain-containing protein;gene=yjaZ;Parent=GCA000160335_02384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5504,COG:R,RefSeq:WP_000276770.1,SO:0001217,UniParc:UPI00003B191B,UniRef:UniRef100_A0A7Z7W2J1,UniRef:UniRef50_Q2FVM9,UniRef:UniRef90_Q2FVN0
contig_1	Pyrodigal	gene	2399532	2400272	.	+	.	ID=GCA000160335_02385_gene;locus_tag=GCA000160335_02385;gene=soxR
contig_1	Pyrodigal	CDS	2399532	2400272	.	+	0	ID=GCA000160335_02385;Name=HTH merR-type domain-containing protein;locus_tag=GCA000160335_02385;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000160335_02385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000332074.1,SO:0001217,UniParc:UPI00019F4E24,UniRef:UniRef100_A0A7Z7W2N4,UniRef:UniRef50_Q2FVM8,UniRef:UniRef90_Q2FVM8
contig_1	Pyrodigal	gene	2400526	2401179	.	-	.	ID=GCA000160335_02386_gene;locus_tag=GCA000160335_02386;gene=nreC
contig_1	Pyrodigal	CDS	2400526	2401179	.	-	0	ID=GCA000160335_02386;Name=nitrate respiration regulation response regulator NreC;locus_tag=GCA000160335_02386;product=nitrate respiration regulation response regulator NreC;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=nreC;Parent=GCA000160335_02386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_015901130,BlastRules:WP_016911488,RefSeq:WP_000706314.1,SO:0001217,UniParc:UPI00003B191C,UniRef:UniRef100_Q6GE42,UniRef:UniRef50_Q7WZY4,UniRef:UniRef90_Q6GE42
contig_1	Pyrodigal	gene	2401202	2402236	.	-	.	ID=GCA000160335_02387_gene;locus_tag=GCA000160335_02387;gene=nreB
contig_1	Pyrodigal	CDS	2401202	2402236	.	-	0	ID=GCA000160335_02387;Name=nitrate respiration regulation sensor histidine kinase NreB;locus_tag=GCA000160335_02387;product=nitrate respiration regulation sensor histidine kinase NreB;Dbxref=GO:0000155,GO:0005506,GO:0005524,GO:0005737,GO:0016020,GO:0046983,GO:0051539;gene=nreB;Parent=GCA000160335_02387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000606551,BlastRules:WP_011274984,BlastRules:WP_015901131,COG:COG4585,COG:T,KEGG:K07683,RefSeq:WP_000606550.1,SO:0001217,UniParc:UPI00003B191D,UniRef:UniRef100_Q6GE41,UniRef:UniRef50_Q7WZY5,UniRef:UniRef90_Q2FVM6;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2402260	2402712	.	-	.	ID=GCA000160335_02388_gene;locus_tag=GCA000160335_02388;gene=nreA
contig_1	Pyrodigal	CDS	2402260	2402712	.	-	0	ID=GCA000160335_02388;Name=nitrate respiration regulation accessory nitrate sensor NreA;locus_tag=GCA000160335_02388;product=nitrate respiration regulation accessory nitrate sensor NreA;gene=nreA;Parent=GCA000160335_02388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2203,COG:T,KEGG:K10851,RefSeq:WP_000186931.1,SO:0001217,UniParc:UPI00003B191E,UniRef:UniRef100_A0A7Z7W3U1,UniRef:UniRef50_Q2FVM5,UniRef:UniRef90_Q2FVM5
contig_1	Pyrodigal	gene	2402732	2403409	.	-	.	ID=GCA000160335_02389_gene;locus_tag=GCA000160335_02389;gene=narI
contig_1	Pyrodigal	CDS	2402732	2403409	.	-	0	ID=GCA000160335_02389;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000160335_02389;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0008940,GO:0009325,GO:0019645;gene=narI;Parent=GCA000160335_02389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2181,COG:CP,RefSeq:WP_000934153.1,SO:0001217,UniParc:UPI00003B191F,UniRef:UniRef100_A0A7Z7R0L1,UniRef:UniRef50_A0A7U7PWT4,UniRef:UniRef90_A0A7U7PWT4;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2403402	2403977	.	-	.	ID=GCA000160335_02390_gene;locus_tag=GCA000160335_02390;gene=narJ
contig_1	Pyrodigal	CDS	2403402	2403977	.	-	0	ID=GCA000160335_02390;Name=nitrate reductase molybdenum cofactor assembly chaperone;locus_tag=GCA000160335_02390;product=nitrate reductase molybdenum cofactor assembly chaperone;Dbxref=GO:0051082,GO:0051131;gene=narJ;Parent=GCA000160335_02390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2180,COG:CPO,KEGG:K00373,RefSeq:WP_000606763.1,SO:0001217,UniParc:UPI00003B1920,UniRef:UniRef100_A0A7Z7R129,UniRef:UniRef50_A0A0D0RML2,UniRef:UniRef90_W8TTV0
contig_1	Pyrodigal	gene	2403970	2405529	.	-	.	ID=GCA000160335_02391_gene;locus_tag=GCA000160335_02391;gene=narH
contig_1	Pyrodigal	CDS	2403970	2405529	.	-	0	ID=GCA000160335_02391;Name=nitrate reductase subunit beta;locus_tag=GCA000160335_02391;product=nitrate reductase subunit beta;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narH;Parent=GCA000160335_02391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1140,COG:CP,KEGG:K00371,RefSeq:WP_000692652.1,SO:0001217,UniParc:UPI0001B70168,UniRef:UniRef100_A0A7Z7R0F7,UniRef:UniRef50_P11349,UniRef:UniRef90_A0A0U1MSV9;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2405519	2409208	.	-	.	ID=GCA000160335_02392_gene;locus_tag=GCA000160335_02392;gene=narG
contig_1	Pyrodigal	CDS	2405519	2409208	.	-	0	ID=GCA000160335_02392;Name=nitrate reductase subunit alpha;locus_tag=GCA000160335_02392;product=nitrate reductase subunit alpha;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narG;Parent=GCA000160335_02392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5013,COG:CP,KEGG:K00370,RefSeq:WP_000514375.1,SO:0001217,UniParc:UPI00003B1922,UniRef:UniRef100_A0A7Z7R0F1,UniRef:UniRef50_A0A127FDB7,UniRef:UniRef90_A0A2S6DTK4;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2409515	2410492	.	-	.	ID=GCA000160335_02393_gene;locus_tag=GCA000160335_02393;gene=cysG
contig_1	Pyrodigal	CDS	2409515	2410492	.	-	0	ID=GCA000160335_02393;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000160335_02393;product=uroporphyrinogen-III C-methyltransferase;gene=cysG;Parent=GCA000160335_02393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0007,COG:H,RefSeq:WP_000115658.1,SO:0001217,UniParc:UPI00003B1923,UniRef:UniRef100_A0A7Z7R0H3,UniRef:UniRef50_A0A3A5LVF3,UniRef:UniRef90_A0A3A5LVF3
contig_1	Pyrodigal	gene	2410483	2410797	.	-	.	ID=GCA000160335_02394_gene;locus_tag=GCA000160335_02394;gene=nirD
contig_1	Pyrodigal	CDS	2410483	2410797	.	-	0	ID=GCA000160335_02394;Name=Nitrite reductase (NAD(P)H) small subunit;locus_tag=GCA000160335_02394;product=Nitrite reductase (NAD(P)H) small subunit;gene=nirD;Parent=GCA000160335_02394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2146,COG:PQ,KEGG:K26138,RefSeq:WP_000448227.1,SO:0001217,UniParc:UPI00003B1924,UniRef:UniRef100_A0A7Z7R0T6,UniRef:UniRef50_A0A3A3AHT4,UniRef:UniRef90_A0A3A3AHT4;ec_number=1.7.1.4
contig_1	Pyrodigal	gene	2410801	2413206	.	-	.	ID=GCA000160335_02395_gene;locus_tag=GCA000160335_02395;gene=nirB
contig_1	Pyrodigal	CDS	2410801	2413206	.	-	0	ID=GCA000160335_02395;Name=NAD(P)/FAD-dependent oxidoreductase;locus_tag=GCA000160335_02395;product=NAD(P)/FAD-dependent oxidoreductase;gene=nirB;Parent=GCA000160335_02395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1251,RefSeq:WP_001118708.1,SO:0001217,UniParc:UPI00003B1925,UniRef:UniRef100_A0AAJ4YWF3,UniRef:UniRef50_A0A380G539,UniRef:UniRef90_A0A3M9GSL0
contig_1	Pyrodigal	gene	2413252	2414004	.	-	.	ID=GCA000160335_02396_gene;locus_tag=GCA000160335_02396
contig_1	Pyrodigal	CDS	2413252	2414004	.	-	0	ID=GCA000160335_02396;Name=Sirohydrochlorin cobaltochelatase;locus_tag=GCA000160335_02396;product=Sirohydrochlorin cobaltochelatase;Parent=GCA000160335_02396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001014082.1,SO:0001217,UniParc:UPI00003B1926,UniRef:UniRef100_A0A7Z7R1H1,UniRef:UniRef50_Q2G1V2,UniRef:UniRef90_A0A0E1XLS8
contig_1	Pyrodigal	gene	2414232	2414768	.	-	.	ID=GCA000160335_02397_gene;locus_tag=GCA000160335_02397;gene=yhbS
contig_1	Pyrodigal	CDS	2414232	2414768	.	-	0	ID=GCA000160335_02397;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02397;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000160335_02397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,KEGG:K00680,RefSeq:WP_000024292.1,SO:0001217,UniParc:UPI00003B1927,UniRef:UniRef100_A0A0E1XDR3,UniRef:UniRef50_Q2G1V1,UniRef:UniRef90_Q2G1V1;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2415236	2416060	.	-	.	ID=GCA000160335_02398_gene;locus_tag=GCA000160335_02398;gene=focA
contig_1	Pyrodigal	CDS	2415236	2416060	.	-	0	ID=GCA000160335_02398;Name=Formate/nitrite transporter%2C putative;locus_tag=GCA000160335_02398;product=Formate/nitrite transporter%2C putative;gene=focA;Parent=GCA000160335_02398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000594640.1,SO:0001217,UniParc:UPI00003B1928,UniRef:UniRef100_A0A7Z7W2J6,UniRef:UniRef50_Q2G1V0,UniRef:UniRef90_Q2G1V0
contig_1	Pyrodigal	gene	2416263	2416445	.	-	.	ID=GCA000160335_02399_gene;locus_tag=GCA000160335_02399
contig_1	Pyrodigal	CDS	2416263	2416445	.	-	0	ID=GCA000160335_02399;Name=Membrane protein;locus_tag=GCA000160335_02399;product=Membrane protein;Parent=GCA000160335_02399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000079140.1,SO:0001217,UniParc:UPI00003B1929,UniRef:UniRef100_A0A7Z7W2N9,UniRef:UniRef50_Q2G1U7,UniRef:UniRef90_A0AAE2ZSI2
contig_1	Pyrodigal	gene	2416532	2416999	.	-	.	ID=GCA000160335_02400_gene;locus_tag=GCA000160335_02400;gene=yndB
contig_1	Pyrodigal	CDS	2416532	2416999	.	-	0	ID=GCA000160335_02400;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000160335_02400;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000160335_02400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_000153340.1,SO:0001217,UniParc:UPI00003B192A,UniRef:UniRef100_A0A7Z7W2X6,UniRef:UniRef50_Q5HLI9,UniRef:UniRef90_Q2G1U9
contig_1	Pyrodigal	gene	2417185	2418732	.	-	.	ID=GCA000160335_02401_gene;locus_tag=GCA000160335_02401;gene=adcA
contig_1	Pyrodigal	CDS	2417185	2418732	.	-	0	ID=GCA000160335_02401;Name=zinc ABC transporter substrate-binding lipoprotein AdcA;locus_tag=GCA000160335_02401;product=zinc ABC transporter substrate-binding lipoprotein AdcA;gene=adcA;Parent=GCA000160335_02401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3443,COG:P,RefSeq:WP_000727771.1,SO:0001217,UniParc:UPI00003B192B,UniRef:UniRef100_A0A7Z7W2I4,UniRef:UniRef50_A0A391LQP8,UniRef:UniRef90_A0A391LQP8
contig_1	Pyrodigal	gene	2419025	2419291	.	-	.	ID=GCA000160335_02402_gene;locus_tag=GCA000160335_02402
contig_1	Pyrodigal	CDS	2419025	2419291	.	-	0	ID=GCA000160335_02402;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000160335_02402;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000160335_02402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000251928.1,SO:0001217,UniParc:UPI00003B192C,UniRef:UniRef100_A0A7Z7W3U6,UniRef:UniRef50_A0A3A3ATA4,UniRef:UniRef90_A0A3A3ATA4
contig_1	Pyrodigal	gene	2419291	2419542	.	-	.	ID=GCA000160335_02403_gene;locus_tag=GCA000160335_02403;gene=stbD
contig_1	Pyrodigal	CDS	2419291	2419542	.	-	0	ID=GCA000160335_02403;Name=Antitoxin;locus_tag=GCA000160335_02403;product=Antitoxin;gene=stbD;Parent=GCA000160335_02403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000584497.1,SO:0001217,UniParc:UPI00003B192D,UniRef:UniRef100_A0A7Z7R0M3,UniRef:UniRef50_Q5DWE0,UniRef:UniRef90_A0A077UKZ8
contig_1	Pyrodigal	gene	2419813	2420412	.	-	.	ID=GCA000160335_02404_gene;locus_tag=GCA000160335_02404;gene=dsbG
contig_1	Pyrodigal	CDS	2419813	2420412	.	-	0	ID=GCA000160335_02404;Name=Thioredoxin-like fold domain-containing protein;locus_tag=GCA000160335_02404;product=Thioredoxin-like fold domain-containing protein;gene=dsbG;Parent=GCA000160335_02404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_000162804.1,SO:0001217,UniParc:UPI00003B192E,UniRef:UniRef100_A0A7Z7R137,UniRef:UniRef50_A0AAP8PPS4,UniRef:UniRef90_Q2FVL7
contig_1	Pyrodigal	gene	2420431	2420793	.	-	.	ID=GCA000160335_02405_gene;locus_tag=GCA000160335_02405
contig_1	Pyrodigal	CDS	2420431	2420793	.	-	0	ID=GCA000160335_02405;Name=DUF4467 domain-containing protein;locus_tag=GCA000160335_02405;product=DUF4467 domain-containing protein;Parent=GCA000160335_02405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000819843.1,SO:0001217,UniParc:UPI00000DA0F2,UniRef:UniRef100_A0A7Z7R0G7,UniRef:UniRef50_A0A640MXZ4,UniRef:UniRef90_Q2FVL6
contig_1	Pyrodigal	gene	2421048	2422298	.	+	.	ID=GCA000160335_02406_gene;locus_tag=GCA000160335_02406;gene=fmhA
contig_1	Pyrodigal	CDS	2421048	2422298	.	+	0	ID=GCA000160335_02406;Name=FemA/FemB family glycyltransferase FmhA;locus_tag=GCA000160335_02406;product=FemA/FemB family glycyltransferase FmhA;gene=fmhA;Parent=GCA000160335_02406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001012222,COG:COG2348,COG:M,RefSeq:WP_001012237.1,SO:0001217,UniParc:UPI00003B192F,UniRef:UniRef100_A0A0Z1CVN6,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_Q9X4D6
contig_1	Pyrodigal	gene	2422395	2423126	.	-	.	ID=GCA000160335_02407_gene;locus_tag=GCA000160335_02407;gene=glnQ
contig_1	Pyrodigal	CDS	2422395	2423126	.	-	0	ID=GCA000160335_02407;Name=Amino acid ABC transporter%2C ATP-binding protein;locus_tag=GCA000160335_02407;product=Amino acid ABC transporter%2C ATP-binding protein;gene=glnQ;Parent=GCA000160335_02407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_000615467.1,SO:0001217,UniParc:UPI00003B1930,UniRef:UniRef100_A0A0Z1CVJ0,UniRef:UniRef50_A0A564T2N1,UniRef:UniRef90_A0A0Z1CVJ0
contig_1	Pyrodigal	gene	2423123	2423851	.	-	.	ID=GCA000160335_02408_gene;locus_tag=GCA000160335_02408;gene=hisM
contig_1	Pyrodigal	CDS	2423123	2423851	.	-	0	ID=GCA000160335_02408;Name=Amino acid ABC transproter%2C permease protein%2C putative;locus_tag=GCA000160335_02408;product=Amino acid ABC transproter%2C permease protein%2C putative;gene=hisM;Parent=GCA000160335_02408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,SO:0001217,UniParc:UPI0001B3B3E6,UniRef:UniRef100_A0A7Z7R0N2,UniRef:UniRef50_B9DL82,UniRef:UniRef90_Q2FVL3
contig_1	Pyrodigal	gene	2423823	2424602	.	-	.	ID=GCA000160335_02409_gene;locus_tag=GCA000160335_02409;gene=hisJ
contig_1	Pyrodigal	CDS	2423823	2424602	.	-	0	ID=GCA000160335_02409;Name=Amino acid ABC transporter substrate-binding protein;locus_tag=GCA000160335_02409;product=Amino acid ABC transporter substrate-binding protein;gene=hisJ;Parent=GCA000160335_02409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000825937.1,SO:0001217,UniParc:UPI00003B1932,UniRef:UniRef100_A0A7Z7R1I7,UniRef:UniRef50_B9DL83,UniRef:UniRef90_Q2FVL2
contig_1	Pyrodigal	gene	2424723	2426162	.	-	.	ID=GCA000160335_02410_gene;locus_tag=GCA000160335_02410;gene=mdeA
contig_1	Pyrodigal	CDS	2424723	2426162	.	-	0	ID=GCA000160335_02410;Name=multidrug efflux MFS transporter MdeA;locus_tag=GCA000160335_02410;product=multidrug efflux MFS transporter MdeA;gene=mdeA;Parent=GCA000160335_02410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000038968,COG:COG2814,COG:G,RefSeq:WP_000038955.1,SO:0001217,UniParc:UPI00003B1933,UniRef:UniRef100_A0A7Z7R1F4,UniRef:UniRef50_A0A660A2M0,UniRef:UniRef90_A0A660A2M0
contig_1	Pyrodigal	gene	2426336	2426440	.	+	.	ID=GCA000160335_02411_gene;locus_tag=GCA000160335_02411
contig_1	Pyrodigal	CDS	2426336	2426440	.	+	0	ID=GCA000160335_02411;Name=Metal homeostasis protein;locus_tag=GCA000160335_02411;product=Metal homeostasis protein;Parent=GCA000160335_02411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000762708.1,SO:0001217,UniParc:UPI0000054BA3,UniRef:UniRef100_Q2FVK9,UniRef:UniRef50_Q49ZZ1,UniRef:UniRef90_G5JKK3
contig_1	Pyrodigal	gene	2426593	2427279	.	-	.	ID=GCA000160335_02412_gene;locus_tag=GCA000160335_02412;gene=gpmA
contig_1	Pyrodigal	CDS	2426593	2427279	.	-	0	ID=GCA000160335_02412;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA000160335_02412;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;Dbxref=GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000160335_02412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_001125210.1,SO:0001217,UniParc:UPI00003B1934,UniRef:UniRef100_Q6GE17,UniRef:UniRef50_Q9CIM0,UniRef:UniRef90_Q2FVK8;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	2427606	2428472	.	-	.	ID=GCA000160335_02413_gene;locus_tag=GCA000160335_02413;gene=fieF
contig_1	Pyrodigal	CDS	2427606	2428472	.	-	0	ID=GCA000160335_02413;Name=Cation efflux protein cytoplasmic domain-containing protein;locus_tag=GCA000160335_02413;product=Cation efflux protein cytoplasmic domain-containing protein;gene=fieF;Parent=GCA000160335_02413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0053,COG:P,KEGG:K13283,RefSeq:WP_000019127.1,SO:0001217,UniParc:UPI00000D78A0,UniRef:UniRef100_Q2FVK7,UniRef:UniRef50_Q2FVK7,UniRef:UniRef90_Q2FVK7
contig_1	Pyrodigal	gene	2429170	2430483	.	+	.	ID=GCA000160335_02414_gene;locus_tag=GCA000160335_02414;gene=sbi
contig_1	Pyrodigal	CDS	2429170	2430483	.	+	0	ID=GCA000160335_02414;Name=IgG-binding protein SBI;locus_tag=GCA000160335_02414;product=IgG-binding protein SBI;Dbxref=GO:0005576,GO:0005886,GO:0019864;gene=sbi;Parent=GCA000160335_02414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14197,RefSeq:WP_000792567.1,SO:0001217,UniParc:UPI00003B1935,UniRef:UniRef100_Q6GE15,UniRef:UniRef50_Q931F4,UniRef:UniRef90_Q931F4,VFDB:VFC0258,VFDB:VFG002421
contig_1	Pyrodigal	gene	2430983	2431948	.	+	.	ID=GCA000160335_02415_gene;locus_tag=GCA000160335_02415;gene=hlgA
contig_1	Pyrodigal	CDS	2430983	2431948	.	+	0	ID=GCA000160335_02415;Name=bi-component gamma-hemolysin HlgAB subunit A;locus_tag=GCA000160335_02415;product=bi-component gamma-hemolysin HlgAB subunit A;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgA;Parent=GCA000160335_02415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594519,NCBIProtein:AUU54669.1,SO:0001217,UniParc:UPI00019CD5F7,UniRef:UniRef100_A0A7Z7W3V3,UniRef:UniRef50_O54081,UniRef:UniRef90_Q5HDD6
contig_1	Pyrodigal	gene	2432498	2433445	.	+	.	ID=GCA000160335_02416_gene;locus_tag=GCA000160335_02416;gene=hlgC
contig_1	Pyrodigal	CDS	2432498	2433445	.	+	0	ID=GCA000160335_02416;Name=bi-component gamma-hemolysin HlgCB subunit C;locus_tag=GCA000160335_02416;product=bi-component gamma-hemolysin HlgCB subunit C;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgC;Parent=GCA000160335_02416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_088621908,NCBIProtein:CAA57277.1,RefSeq:WP_000916697.1,SO:0001217,UniParc:UPI00003B1937,UniRef:UniRef100_Q6GE13,UniRef:UniRef50_O54081,UniRef:UniRef90_P31716
contig_1	Pyrodigal	gene	2433447	2434424	.	+	.	ID=GCA000160335_02417_gene;locus_tag=GCA000160335_02417;gene=hlgB
contig_1	Pyrodigal	CDS	2433447	2434424	.	+	0	ID=GCA000160335_02417;Name=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;locus_tag=GCA000160335_02417;product=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgB;Parent=GCA000160335_02417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001056917,NCBIProtein:CAA57278.1,RefSeq:WP_001056917.1,SO:0001217,UniParc:UPI00000B01A7,UniRef:UniRef100_Q6GE12,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q2FVK1
contig_1	Pyrodigal	gene	2434476	2434943	.	-	.	ID=GCA000160335_02418_gene;locus_tag=GCA000160335_02418;gene=queT
contig_1	Pyrodigal	CDS	2434476	2434943	.	-	0	ID=GCA000160335_02418;Name=QueT transporter family protein;locus_tag=GCA000160335_02418;product=QueT transporter family protein;gene=queT;Parent=GCA000160335_02418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000200947.1,SO:0001217,UniParc:UPI00003B1938,UniRef:UniRef100_A0A0E1XDP1,UniRef:UniRef50_Q2FVK0,UniRef:UniRef90_A0A0E1XDP1
contig_1	Pyrodigal	gene	2434954	2435646	.	-	.	ID=GCA000160335_02419_gene;locus_tag=GCA000160335_02419;gene=bioW
contig_1	Pyrodigal	CDS	2434954	2435646	.	-	0	ID=GCA000160335_02419;Name=6-carboxyhexanoate--CoA ligase;locus_tag=GCA000160335_02419;product=6-carboxyhexanoate--CoA ligase;Dbxref=GO:0000287,GO:0005524,GO:0009102,GO:0042410;gene=bioW;Parent=GCA000160335_02419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1424,COG:H,KEGG:K01906,RefSeq:WP_000286869.1,SO:0001217,UniParc:UPI0001B7016A,UniRef:UniRef100_UPI0001B7016A,UniRef:UniRef50_Q2FVJ9,UniRef:UniRef90_Q2FVJ9;ec_number=6.2.1.14
contig_1	Pyrodigal	gene	2435657	2436772	.	-	.	ID=GCA000160335_02420_gene;locus_tag=GCA000160335_02420;gene=bioF
contig_1	Pyrodigal	CDS	2435657	2436772	.	-	0	ID=GCA000160335_02420;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000160335_02420;product=8-amino-7-oxononanoate synthase;gene=bioF;Parent=GCA000160335_02420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000971554.1,SO:0001217,UniParc:UPI00003B193A,UniRef:UniRef100_A0A7Z7R0J8,UniRef:UniRef50_A0A2I7YAG2,UniRef:UniRef90_A0A2I7YAG2
contig_1	Pyrodigal	gene	2436750	2437757	.	-	.	ID=GCA000160335_02421_gene;locus_tag=GCA000160335_02421;gene=bioB
contig_1	Pyrodigal	CDS	2436750	2437757	.	-	0	ID=GCA000160335_02421;Name=biotin synthase BioB;locus_tag=GCA000160335_02421;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000160335_02421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_001046650.1,SO:0001217,UniParc:UPI00003B193B,UniRef:UniRef100_Q6GE08,UniRef:UniRef50_Q81MB3,UniRef:UniRef90_Q2FVJ7;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	2437759	2439117	.	-	.	ID=GCA000160335_02422_gene;locus_tag=GCA000160335_02422;gene=bioA
contig_1	Pyrodigal	CDS	2437759	2439117	.	-	0	ID=GCA000160335_02422;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000160335_02422;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170;gene=bioA;Parent=GCA000160335_02422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,KEGG:K00833,RefSeq:WP_001110072.1,SO:0001217,UniParc:UPI00019F4E0E,UniRef:UniRef100_A0A7Z7R175,UniRef:UniRef50_Q2FVJ6,UniRef:UniRef90_Q2FVJ6;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	2439095	2439781	.	-	.	ID=GCA000160335_02423_gene;locus_tag=GCA000160335_02423;gene=bioD
contig_1	Pyrodigal	CDS	2439095	2439781	.	-	0	ID=GCA000160335_02423;Name=dethiobiotin synthase;locus_tag=GCA000160335_02423;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0009102;gene=bioD;Parent=GCA000160335_02423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_001217911.1,SO:0001217,UniParc:UPI00003B193D,UniRef:UniRef100_A0A0Z1CX15,UniRef:UniRef50_Q5HKF0,UniRef:UniRef90_A0A3A5LQG2;ec_number=6.3.3.3
contig_1	Infernal	gene	2439882	2440168	.	+	.	ID=GCA000160335_02424_gene;locus_tag=GCA000160335_02424;gene=rsaJ
contig_1	Infernal	ncRNA	2439882	2440168	5.2e-46	+	.	ID=GCA000160335_02424;Name=RNA Staph. aureus A;locus_tag=GCA000160335_02424;gene=rsaJ;product=RNA Staph. aureus A;Dbxref=RFAM:RF01822;Parent=GCA000160335_02424_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01822
contig_1	Pyrodigal	gene	2440234	2441967	.	-	.	ID=GCA000160335_02425_gene;locus_tag=GCA000160335_02425;gene=mdlB
contig_1	Pyrodigal	CDS	2440234	2441967	.	-	0	ID=GCA000160335_02425;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_02425;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000160335_02425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000486505.1,SO:0001217,UniParc:UPI00003B193E,UniRef:UniRef100_A0A170P2U7,UniRef:UniRef50_Q2FVJ2,UniRef:UniRef90_Q2FVJ2
contig_1	Pyrodigal	gene	2441992	2443755	.	-	.	ID=GCA000160335_02426_gene;locus_tag=GCA000160335_02426;gene=mdlB
contig_1	Pyrodigal	CDS	2441992	2443755	.	-	0	ID=GCA000160335_02426;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_02426;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000160335_02426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_001064829.1,SO:0001217,UniParc:UPI00019CD5C3,UniRef:UniRef100_A0A7U7IDG9,UniRef:UniRef50_Q2FVJ1,UniRef:UniRef90_Q2FVJ1
contig_1	Infernal	gene	2444371	2444467	.	+	.	ID=GCA000160335_02427_gene;locus_tag=GCA000160335_02427;gene=fstAT
contig_1	Infernal	ncRNA	2444371	2444467	3.6e-11	+	.	ID=GCA000160335_02427;Name=Fst antitoxin sRNA;locus_tag=GCA000160335_02427;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000160335_02427_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	2444644	2445030	.	-	.	ID=GCA000160335_02428_gene;locus_tag=GCA000160335_02428;gene=gtxA
contig_1	Pyrodigal	CDS	2444644	2445030	.	-	0	ID=GCA000160335_02428;Name=flippase GtxA;locus_tag=GCA000160335_02428;product=flippase GtxA;gene=gtxA;Parent=GCA000160335_02428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779358,COG:COG2246,COG:I,RefSeq:WP_000779351.1,SO:0001217,UniParc:UPI00003B1942,UniRef:UniRef100_A0A7Z7W2K7,UniRef:UniRef50_Q2FVI8,UniRef:UniRef90_Q2FVI8
contig_1	Pyrodigal	gene	2445298	2446440	.	+	.	ID=GCA000160335_02429_gene;locus_tag=GCA000160335_02429;gene=glxK
contig_1	Pyrodigal	CDS	2445298	2446440	.	+	0	ID=GCA000160335_02429;Name=Glycerate kinase;locus_tag=GCA000160335_02429;product=Glycerate kinase;gene=glxK;Parent=GCA000160335_02429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_001176855.1,SO:0001217,UniParc:UPI00003B1943,UniRef:UniRef100_A0A0E1XLP8,UniRef:UniRef50_A0A0U1MSN1,UniRef:UniRef90_A0A0U1MSN1;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	2446500	2447159	.	+	.	ID=GCA000160335_02430_gene;locus_tag=GCA000160335_02430
contig_1	Pyrodigal	CDS	2446500	2447159	.	+	0	ID=GCA000160335_02430;Name=hypothetical protein;locus_tag=GCA000160335_02430;product=hypothetical protein;Parent=GCA000160335_02430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000831298.1,SO:0001217,UniParc:UPI00000CAD76,UniRef:UniRef100_Q2FVI6,UniRef:UniRef50_Q2FVI6,UniRef:UniRef90_Q2FVI6
contig_1	Pyrodigal	gene	2447341	2448552	.	+	.	ID=GCA000160335_02431_gene;locus_tag=GCA000160335_02431;gene=araJ
contig_1	Pyrodigal	CDS	2447341	2448552	.	+	0	ID=GCA000160335_02431;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000160335_02431;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000160335_02431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_001191919.1,SO:0001217,UniParc:UPI00003B1944,UniRef:UniRef100_A0A7Z7W2J4,UniRef:UniRef50_Q2FVI5,UniRef:UniRef90_Q2FVI5
contig_1	Pyrodigal	gene	2448675	2449148	.	-	.	ID=GCA000160335_02432_gene;locus_tag=GCA000160335_02432;gene=ydeE
contig_1	Pyrodigal	CDS	2448675	2449148	.	-	0	ID=GCA000160335_02432;Name=Bacterial transcription activator effector binding domain-containing protein;locus_tag=GCA000160335_02432;product=Bacterial transcription activator effector binding domain-containing protein;gene=ydeE;Parent=GCA000160335_02432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3708,COG:K,RefSeq:WP_000456496.1,SO:0001217,UniParc:UPI00003B1945,UniRef:UniRef100_A0A166QH13,UniRef:UniRef50_A0A7U7IFB2,UniRef:UniRef90_A0A7U7IFB2
contig_1	Pyrodigal	gene	2449261	2449917	.	+	.	ID=GCA000160335_02433_gene;locus_tag=GCA000160335_02433;gene=yvpB
contig_1	Pyrodigal	CDS	2449261	2449917	.	+	0	ID=GCA000160335_02433;Name=Peptidase C39-like domain-containing protein;locus_tag=GCA000160335_02433;product=Peptidase C39-like domain-containing protein;gene=yvpB;Parent=GCA000160335_02433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4990,COG:R,RefSeq:WP_001080277.1,SO:0001217,UniParc:UPI0001B7001C,UniRef:UniRef100_UPI0001B7001C,UniRef:UniRef50_Q2FVI3,UniRef:UniRef90_Q2FVI3
contig_1	Pyrodigal	gene	2449980	2450786	.	-	.	ID=GCA000160335_02434_gene;locus_tag=GCA000160335_02434;gene=cpdA
contig_1	Pyrodigal	CDS	2449980	2450786	.	-	0	ID=GCA000160335_02434;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000160335_02434;product=Calcineurin-like phosphoesterase domain-containing protein;gene=cpdA;Parent=GCA000160335_02434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_000690209.1,SO:0001217,UniParc:UPI00003B1947,UniRef:UniRef100_A0A166QGZ2,UniRef:UniRef50_Q2FVI2,UniRef:UniRef90_Q2FVI2
contig_1	Pyrodigal	gene	2451072	2452481	.	+	.	ID=GCA000160335_02435_gene;locus_tag=GCA000160335_02435
contig_1	Pyrodigal	CDS	2451072	2452481	.	+	0	ID=GCA000160335_02435;Name=D-serine/D-alanine/glycine transporter;locus_tag=GCA000160335_02435;product=D-serine/D-alanine/glycine transporter;Parent=GCA000160335_02435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000101538.1,SO:0001217,UniParc:UPI0000054BBC,UniRef:UniRef100_Q2FVI1,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_A0A077UKT4
contig_1	Pyrodigal	gene	2452619	2454697	.	+	.	ID=GCA000160335_02436_gene;locus_tag=GCA000160335_02436;gene=nhaP
contig_1	Pyrodigal	CDS	2452619	2454697	.	+	0	ID=GCA000160335_02436;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000160335_02436;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000160335_02436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,KEGG:K24163,RefSeq:WP_001185679.1,SO:0001217,UniParc:UPI00003B1948,UniRef:UniRef100_A0A7Z7R0I1,UniRef:UniRef50_Q2FVI0,UniRef:UniRef90_Q2FVI0
contig_1	Pyrodigal	gene	2454837	2456666	.	-	.	ID=GCA000160335_02437_gene;locus_tag=GCA000160335_02437
contig_1	Pyrodigal	CDS	2454837	2456666	.	-	0	ID=GCA000160335_02437;Name=Amino acid permease;locus_tag=GCA000160335_02437;product=Amino acid permease;Parent=GCA000160335_02437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000483051.1,SO:0001217,UniParc:UPI00019F4DEA,UniRef:UniRef100_A0A7Z7R0K9,UniRef:UniRef50_P96589,UniRef:UniRef90_G5JFG7
contig_1	Pyrodigal	gene	2456898	2458397	.	+	.	ID=GCA000160335_02438_gene;locus_tag=GCA000160335_02438;gene=flp
contig_1	Pyrodigal	CDS	2456898	2458397	.	+	0	ID=GCA000160335_02438;Name=Protein flp;locus_tag=GCA000160335_02438;product=Protein flp;Dbxref=GO:0005886;gene=flp;Parent=GCA000160335_02438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1680,COG:V,RefSeq:WP_000208581.1,SO:0001217,UniParc:UPI00003B194A,UniRef:UniRef100_Q6GDZ1,UniRef:UniRef50_Q2FVH6,UniRef:UniRef90_Q2FVH6
contig_1	Pyrodigal	gene	2458504	2459355	.	-	.	ID=GCA000160335_02439_gene;locus_tag=GCA000160335_02439;gene=wcaG
contig_1	Pyrodigal	CDS	2458504	2459355	.	-	0	ID=GCA000160335_02439;Name=MW2366 protein;locus_tag=GCA000160335_02439;product=MW2366 protein;gene=wcaG;Parent=GCA000160335_02439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000034506.1,SO:0001217,UniParc:UPI00003B194B,UniRef:UniRef100_A0A098H6N3,UniRef:UniRef50_B9DIE7,UniRef:UniRef90_A0A0H3K1K1
contig_1	Pyrodigal	gene	2459677	2460612	.	-	.	ID=GCA000160335_02440_gene;locus_tag=GCA000160335_02440;gene=panE
contig_1	Pyrodigal	CDS	2459677	2460612	.	-	0	ID=GCA000160335_02440;Name=2-dehydropantoate 2-reductase;locus_tag=GCA000160335_02440;product=2-dehydropantoate 2-reductase;gene=panE;Parent=GCA000160335_02440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000684046.1,SO:0001217,UniParc:UPI00003B194C,UniRef:UniRef100_A0A7Z7R0Q4,UniRef:UniRef50_A0A0U1EBN6,UniRef:UniRef90_A0A2S6D1V7
contig_1	Pyrodigal	gene	2460838	2462238	.	-	.	ID=GCA000160335_02441_gene;locus_tag=GCA000160335_02441;gene=proP
contig_1	Pyrodigal	CDS	2460838	2462238	.	-	0	ID=GCA000160335_02441;Name=Quinolone resistance protein NorB;locus_tag=GCA000160335_02441;product=Quinolone resistance protein NorB;gene=proP;Parent=GCA000160335_02441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000381267.1,SO:0001217,UniParc:UPI00019F4DE9,UniRef:UniRef100_A0A7Z7R1K2,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_A0AAJ4YV50
contig_1	Pyrodigal	gene	2462532	2463227	.	-	.	ID=GCA000160335_02442_gene;locus_tag=GCA000160335_02442;gene=opuBB
contig_1	Pyrodigal	CDS	2462532	2463227	.	-	0	ID=GCA000160335_02442;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000160335_02442;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000160335_02442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000398941.1,SO:0001217,UniParc:UPI0000054BC8,UniRef:UniRef100_Q2FVH1,UniRef:UniRef50_P39775,UniRef:UniRef90_A0A0U1MTP7
contig_1	Pyrodigal	gene	2463227	2464168	.	-	.	ID=GCA000160335_02443_gene;locus_tag=GCA000160335_02443;gene=osmF
contig_1	Pyrodigal	CDS	2463227	2464168	.	-	0	ID=GCA000160335_02443;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);locus_tag=GCA000160335_02443;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);gene=osmF;Parent=GCA000160335_02443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000721559.1,SO:0001217,UniParc:UPI0001B70315,UniRef:UniRef100_UPI0001B70315,UniRef:UniRef50_Q45462,UniRef:UniRef90_A0A7U7JR79
contig_1	Pyrodigal	gene	2464185	2464820	.	-	.	ID=GCA000160335_02444_gene;locus_tag=GCA000160335_02444;gene=opuBB
contig_1	Pyrodigal	CDS	2464185	2464820	.	-	0	ID=GCA000160335_02444;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000160335_02444;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000160335_02444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000569116.1,SO:0001217,UniParc:UPI00003B194F,UniRef:UniRef100_A0A7Z7W2Q8,UniRef:UniRef50_O34878,UniRef:UniRef90_A0A0U1MSP2
contig_1	Pyrodigal	gene	2464817	2466043	.	-	.	ID=GCA000160335_02445_gene;locus_tag=GCA000160335_02445;gene=opuBA
contig_1	Pyrodigal	CDS	2464817	2466043	.	-	0	ID=GCA000160335_02445;Name=Quaternary amine transport ATP-binding protein;locus_tag=GCA000160335_02445;product=Quaternary amine transport ATP-binding protein;gene=opuBA;Parent=GCA000160335_02445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000948990.1,SO:0001217,UniParc:UPI00003B1950,UniRef:UniRef100_A0A0E1XDL6,UniRef:UniRef50_Q45460,UniRef:UniRef90_A0A7U7JRH5
contig_1	Pyrodigal	gene	2466713	2467312	.	-	.	ID=GCA000160335_02446_gene;locus_tag=GCA000160335_02446;gene=ydeI
contig_1	Pyrodigal	CDS	2466713	2467312	.	-	0	ID=GCA000160335_02446;Name=YdhG-like domain-containing protein;locus_tag=GCA000160335_02446;product=YdhG-like domain-containing protein;gene=ydeI;Parent=GCA000160335_02446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4430,COG:S,RefSeq:WP_001291513.1,SO:0001217,UniParc:UPI00003B1951,UniRef:UniRef100_A0A0E1XBD0,UniRef:UniRef50_A0A1E9A998,UniRef:UniRef90_A0A7U7JR81
contig_1	Pyrodigal	gene	2467493	2469130	.	+	.	ID=GCA000160335_02447_gene;locus_tag=GCA000160335_02447;gene=potE
contig_1	Pyrodigal	CDS	2467493	2469130	.	+	0	ID=GCA000160335_02447;Name=APC family permease;locus_tag=GCA000160335_02447;product=APC family permease;gene=potE;Parent=GCA000160335_02447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000588571.1,SO:0001217,UniParc:UPI00003B1952,UniRef:UniRef100_A0A7Z7W3W3,UniRef:UniRef50_A0A4U9TDF7,UniRef:UniRef90_Q2FVG4
contig_1	Pyrodigal	gene	2469437	2470789	.	+	.	ID=GCA000160335_02448_gene;locus_tag=GCA000160335_02448;gene=pnbA
contig_1	Pyrodigal	CDS	2469437	2470789	.	+	0	ID=GCA000160335_02448;Name=Carboxylic ester hydrolase;locus_tag=GCA000160335_02448;product=Carboxylic ester hydrolase;gene=pnbA;Parent=GCA000160335_02448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2272,COG:I,RefSeq:WP_000700902.1,SO:0001217,UniParc:UPI00003B1953,UniRef:UniRef100_A0A114ADG1,UniRef:UniRef50_A0A0H2WZR3,UniRef:UniRef90_A0A0H2WZR3
contig_1	Pyrodigal	gene	2470851	2472038	.	-	.	ID=GCA000160335_02449_gene;locus_tag=GCA000160335_02449;gene=araJ
contig_1	Pyrodigal	CDS	2470851	2472038	.	-	0	ID=GCA000160335_02449;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_02449;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000160335_02449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000026190.1,SO:0001217,UniParc:UPI00003B1954,UniRef:UniRef100_A0A0E1XLM8,UniRef:UniRef50_Q2FVG2,UniRef:UniRef90_Q2FVG2
contig_1	Pyrodigal	gene	2472432	2473208	.	-	.	ID=GCA000160335_02450_gene;locus_tag=GCA000160335_02450;gene=fetB
contig_1	Pyrodigal	CDS	2472432	2473208	.	-	0	ID=GCA000160335_02450;Name=ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000160335_02450;product=ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=fetB;Parent=GCA000160335_02450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0390,COG:P,KEGG:K02069,RefSeq:WP_000072154.1,SO:0001217,UniParc:UPI00003B1955,UniRef:UniRef100_A0A7Z7R0L3,UniRef:UniRef50_A0A0D0SFV4,UniRef:UniRef90_A0A3A3AVI9
contig_1	Pyrodigal	gene	2473201	2473863	.	-	.	ID=GCA000160335_02451_gene;locus_tag=GCA000160335_02451
contig_1	Pyrodigal	CDS	2473201	2473863	.	-	0	ID=GCA000160335_02451;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000160335_02451;product=ATP-binding cassette domain-containing protein;Parent=GCA000160335_02451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000923514.1,SO:0001217,UniParc:UPI00003B1956,UniRef:UniRef100_A0A0E1XBC5,UniRef:UniRef50_A0A0D0SPN6,UniRef:UniRef90_A0A6B1RL06
contig_1	Pyrodigal	gene	2474209	2475285	.	-	.	ID=GCA000160335_02452_gene;locus_tag=GCA000160335_02452;gene=frvX
contig_1	Pyrodigal	CDS	2474209	2475285	.	-	0	ID=GCA000160335_02452;Name=Endoglucanase M;locus_tag=GCA000160335_02452;product=Endoglucanase M;gene=frvX;Parent=GCA000160335_02452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001076679.1,SO:0001217,UniParc:UPI00003B1957,UniRef:UniRef100_A0A0E1XD17,UniRef:UniRef50_A0A390YIZ1,UniRef:UniRef90_A0A390YIZ1
contig_1	Pyrodigal	gene	2475641	2475907	.	-	.	ID=GCA000160335_02453_gene;locus_tag=GCA000160335_02453
contig_1	Pyrodigal	CDS	2475641	2475907	.	-	0	ID=GCA000160335_02453;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000160335_02453;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000160335_02453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000074047.1,SO:0001217,UniParc:UPI00019F4DE5,UniRef:UniRef100_A0A7Z7R0R2,UniRef:UniRef50_Q2FVF8,UniRef:UniRef90_Q2FVF8
contig_1	Pyrodigal	gene	2475907	2476164	.	-	.	ID=GCA000160335_02454_gene;locus_tag=GCA000160335_02454;gene=stbD
contig_1	Pyrodigal	CDS	2475907	2476164	.	-	0	ID=GCA000160335_02454;Name=Antitoxin;locus_tag=GCA000160335_02454;product=Antitoxin;gene=stbD;Parent=GCA000160335_02454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000587617.1,SO:0001217,UniParc:UPI00019F4DE4,UniRef:UniRef100_A0A7Z7R1L2,UniRef:UniRef50_A0A8G2HZW6,UniRef:UniRef90_A0A8G2HZW6
contig_1	Pyrodigal	gene	2476524	2476979	.	+	.	ID=GCA000160335_02455_gene;locus_tag=GCA000160335_02455;gene=yehR
contig_1	Pyrodigal	CDS	2476524	2476979	.	+	0	ID=GCA000160335_02455;Name=DUF1307 domain-containing protein;locus_tag=GCA000160335_02455;product=DUF1307 domain-containing protein;gene=yehR;Parent=GCA000160335_02455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4808,COG:S,RefSeq:WP_000732090.1,SO:0001217,UniParc:UPI00003B1958,UniRef:UniRef100_A0A7Z7R1I0,UniRef:UniRef50_A0A2T4PYL1,UniRef:UniRef90_Q2FVF5
contig_1	Pyrodigal	gene	2477147	2478724	.	-	.	ID=GCA000160335_02456_gene;locus_tag=GCA000160335_02456;gene=gltB2
contig_1	Pyrodigal	CDS	2477147	2478724	.	-	0	ID=GCA000160335_02456;Name=FMN-binding glutamate synthase family protein;locus_tag=GCA000160335_02456;product=FMN-binding glutamate synthase family protein;gene=gltB2;Parent=GCA000160335_02456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0069,COG:E,RefSeq:WP_000143489.1,SO:0001217,UniParc:UPI00003B1959,UniRef:UniRef100_A0A0E1XDK4,UniRef:UniRef50_A0A2S6D1V6,UniRef:UniRef90_A0A2S6D1V6
contig_1	Pyrodigal	gene	2478920	2479669	.	+	.	ID=GCA000160335_02457_gene;locus_tag=GCA000160335_02457;gene=lnsB
contig_1	Pyrodigal	CDS	2478920	2479669	.	+	0	ID=GCA000160335_02457;Name=CPBP family lipoprotein N-acylation protein LnsB;locus_tag=GCA000160335_02457;product=CPBP family lipoprotein N-acylation protein LnsB;gene=lnsB;Parent=GCA000160335_02457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27958,RefSeq:WP_000072447.1,SO:0001217,UniParc:UPI00003B195A,UniRef:UniRef100_A0A7Z7W2Q9,UniRef:UniRef50_Q2FVF3,UniRef:UniRef90_Q2FVF3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2479893	2481086	.	-	.	ID=GCA000160335_02458_gene;locus_tag=GCA000160335_02458;gene=cntE
contig_1	Pyrodigal	CDS	2479893	2481086	.	-	0	ID=GCA000160335_02458;Name=staphylopine family metallophore export MFS transporter CntE;locus_tag=GCA000160335_02458;product=staphylopine family metallophore export MFS transporter CntE;Dbxref=GO:0005886,GO:0022857;gene=cntE;Parent=GCA000160335_02458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000675407.1,SO:0001217,UniParc:UPI00003B195B,UniRef:UniRef100_A0A7Z7W2Z4,UniRef:UniRef50_A0A0H3JTK0,UniRef:UniRef90_A0A0H3JTK0
contig_1	Pyrodigal	gene	2481098	2481847	.	-	.	ID=GCA000160335_02459_gene;locus_tag=GCA000160335_02459;gene=cntF
contig_1	Pyrodigal	CDS	2481098	2481847	.	-	0	ID=GCA000160335_02459;Name=Metal-staphylopine import system ATP-binding protein CntF;locus_tag=GCA000160335_02459;product=Metal-staphylopine import system ATP-binding protein CntF;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006829,GO:0015675,GO:0016887;gene=cntF;Parent=GCA000160335_02459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000590515.1,SO:0001217,UniParc:UPI00000D9FCF,UniRef:UniRef100_A0A7Z7W2K3,UniRef:UniRef50_Q2FVF1,UniRef:UniRef90_Q2FVF1;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2481840	2482655	.	-	.	ID=GCA000160335_02460_gene;locus_tag=GCA000160335_02460;gene=cntD
contig_1	Pyrodigal	CDS	2481840	2482655	.	-	0	ID=GCA000160335_02460;Name=staphylopine uptake ABC transporter ATP-binding protein CntD;locus_tag=GCA000160335_02460;product=staphylopine uptake ABC transporter ATP-binding protein CntD;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0016887;gene=cntD;Parent=GCA000160335_02460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000173876.1,SO:0001217,UniParc:UPI00003B195C,UniRef:UniRef100_A0A0E1XLM0,UniRef:UniRef50_Q2FVF0,UniRef:UniRef90_Q2FVF0;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2482652	2483521	.	-	.	ID=GCA000160335_02461_gene;locus_tag=GCA000160335_02461;gene=cntC
contig_1	Pyrodigal	CDS	2482652	2483521	.	-	0	ID=GCA000160335_02461;Name=staphylopine uptake ABC transporter permease subunit CntC;locus_tag=GCA000160335_02461;product=staphylopine uptake ABC transporter permease subunit CntC;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675;gene=cntC;Parent=GCA000160335_02461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000584765.1,SO:0001217,UniParc:UPI0000054862,UniRef:UniRef100_Q2FVE9,UniRef:UniRef50_Q2FVE9,UniRef:UniRef90_Q2FVE9
contig_1	Pyrodigal	gene	2483518	2484453	.	-	.	ID=GCA000160335_02462_gene;locus_tag=GCA000160335_02462;gene=opp1B
contig_1	Pyrodigal	CDS	2483518	2484453	.	-	0	ID=GCA000160335_02462;Name=nickel/cobalt ABC transporter permease;locus_tag=GCA000160335_02462;product=nickel/cobalt ABC transporter permease;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0043190,GO:0140359;gene=opp1B;Parent=GCA000160335_02462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000472237.1,SO:0001217,UniParc:UPI00003B195D,UniRef:UniRef100_A0A6I2KK99,UniRef:UniRef50_Q2FVE8,UniRef:UniRef90_Q2FVE8
contig_1	Pyrodigal	gene	2484466	2486064	.	-	.	ID=GCA000160335_02463_gene;locus_tag=GCA000160335_02463;gene=cntA
contig_1	Pyrodigal	CDS	2484466	2486064	.	-	0	ID=GCA000160335_02463;Name=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;locus_tag=GCA000160335_02463;product=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;Dbxref=GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0015833,GO:0016151,GO:0020037,GO:0030288,GO:0043190,GO:1904680;gene=cntA;Parent=GCA000160335_02463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001229077,BlastRules:WP_002496571,COG:COG0747,COG:E,RefSeq:WP_001229075.1,SO:0001217,UniParc:UPI0001B70330,UniRef:UniRef100_UPI0001B70330,UniRef:UniRef50_Q2FVE7,UniRef:UniRef90_Q2FVE7
contig_1	Pyrodigal	gene	2486207	2487508	.	-	.	ID=GCA000160335_02464_gene;locus_tag=GCA000160335_02464;gene=cntM
contig_1	Pyrodigal	CDS	2486207	2487508	.	-	0	ID=GCA000160335_02464;Name=staphylopine dehydrogenase CntM;locus_tag=GCA000160335_02464;product=staphylopine dehydrogenase CntM;Dbxref=GO:0016491;gene=cntM;Parent=GCA000160335_02464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_096659686,COG:COG4408,COG:S,KEGG:K23122,RefSeq:WP_000040584.1,SO:0001217,UniParc:UPI00003B195F,UniRef:UniRef100_A0A7Z7R0J9,UniRef:UniRef50_A0A0H3JT80,UniRef:UniRef90_A0A0H3JT80;ec_number=1.5.1.52
contig_1	Pyrodigal	gene	2487501	2488319	.	-	.	ID=GCA000160335_02465_gene;locus_tag=GCA000160335_02465;gene=cntL
contig_1	Pyrodigal	CDS	2487501	2488319	.	-	0	ID=GCA000160335_02465;Name=D-histidine (S)-2-aminobutanoyltransferase CntL;locus_tag=GCA000160335_02465;product=D-histidine (S)-2-aminobutanoyltransferase CntL;Dbxref=GO:0030410,GO:0030418;gene=cntL;Parent=GCA000160335_02465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058843,RefSeq:WP_001058852.1,SO:0001217,UniParc:UPI00003B1960,UniRef:UniRef100_A0A7Z7R0M1,UniRef:UniRef50_A0A0H3JXA8,UniRef:UniRef90_A0A0H3JXA8;ec_number=2.5.1.152
contig_1	Pyrodigal	gene	2488330	2489151	.	-	.	ID=GCA000160335_02466_gene;locus_tag=GCA000160335_02466;gene=cntK
contig_1	Pyrodigal	CDS	2488330	2489151	.	-	0	ID=GCA000160335_02466;Name=histidine racemase CntK;locus_tag=GCA000160335_02466;product=histidine racemase CntK;Dbxref=GO:0016853;gene=cntK;Parent=GCA000160335_02466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01780,RefSeq:WP_001081692.1,SO:0001217,UniParc:UPI00003B1961,UniRef:UniRef100_A0A0E1XDJ4,UniRef:UniRef50_A0A0H3JU78,UniRef:UniRef90_A0A0H3JU78;ec_number=5.1.1.24
contig_1	Pyrodigal	gene	2489853	2490620	.	-	.	ID=GCA000160335_02467_gene;locus_tag=GCA000160335_02467;gene=ulaG
contig_1	Pyrodigal	CDS	2489853	2490620	.	-	0	ID=GCA000160335_02467;Name=Beta-lactamase;locus_tag=GCA000160335_02467;product=Beta-lactamase;gene=ulaG;Parent=GCA000160335_02467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,RefSeq:WP_001026126.1,SO:0001217,UniParc:UPI0001B70040,UniRef:UniRef100_UPI0001B70040,UniRef:UniRef50_A0A0U1MTH5,UniRef:UniRef90_A0A077UGQ7
contig_1	Pyrodigal	gene	2490721	2491539	.	-	.	ID=GCA000160335_02468_gene;locus_tag=GCA000160335_02468
contig_1	Pyrodigal	CDS	2490721	2491539	.	-	0	ID=GCA000160335_02468;Name=SDR family oxidoreductase;locus_tag=GCA000160335_02468;product=SDR family oxidoreductase;Parent=GCA000160335_02468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824929.1,SO:0001217,UniParc:UPI00000D9FD5,UniRef:UniRef100_A0A0Z0XUF0,UniRef:UniRef50_P46331,UniRef:UniRef90_A0A6B5BBF4
contig_1	Pyrodigal	gene	2491774	2493312	.	+	.	ID=GCA000160335_02469_gene;locus_tag=GCA000160335_02469;gene=abgT
contig_1	Pyrodigal	CDS	2491774	2493312	.	+	0	ID=GCA000160335_02469;Name=Transporter%2C putative;locus_tag=GCA000160335_02469;product=Transporter%2C putative;gene=abgT;Parent=GCA000160335_02469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2978,COG:H,KEGG:K12942,RefSeq:WP_000202030.1,SO:0001217,UniParc:UPI00003B1963,UniRef:UniRef100_A0A7Z7R1M1,UniRef:UniRef50_Q4L8X7,UniRef:UniRef90_Q2FVE1
contig_1	Pyrodigal	gene	2493424	2493846	.	-	.	ID=GCA000160335_02470_gene;locus_tag=GCA000160335_02470;gene=yciW
contig_1	Pyrodigal	CDS	2493424	2493846	.	-	0	ID=GCA000160335_02470;Name=Carboxymuconolactone decarboxylase-like domain-containing protein;locus_tag=GCA000160335_02470;product=Carboxymuconolactone decarboxylase-like domain-containing protein;gene=yciW;Parent=GCA000160335_02470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2128,COG:P,RefSeq:WP_001146762.1,SO:0001217,UniParc:UPI00000D9FD7,UniRef:UniRef100_A0A7Z7R1J0,UniRef:UniRef50_Q2FVE0,UniRef:UniRef90_Q2FVE0
contig_1	Pyrodigal	gene	2494299	2494712	.	-	.	ID=GCA000160335_02471_gene;locus_tag=GCA000160335_02471
contig_1	Pyrodigal	CDS	2494299	2494712	.	-	0	ID=GCA000160335_02471;Name=Membrane protein;locus_tag=GCA000160335_02471;product=Membrane protein;Parent=GCA000160335_02471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000037500.1,SO:0001217,UniParc:UPI00003B1964,UniRef:UniRef100_A0A7Z7W2M4,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_A0A380DQG8
contig_1	Pyrodigal	gene	2494730	2495149	.	-	.	ID=GCA000160335_02472_gene;locus_tag=GCA000160335_02472
contig_1	Pyrodigal	CDS	2494730	2495149	.	-	0	ID=GCA000160335_02472;Name=DUF1433 domain-containing protein;locus_tag=GCA000160335_02472;product=DUF1433 domain-containing protein;Parent=GCA000160335_02472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038220.1,SO:0001217,UniParc:UPI00003B1965,UniRef:UniRef100_A0A7Z7W2R4,UniRef:UniRef50_A0A7U7JRB0,UniRef:UniRef90_A0A8G2I1U5
contig_1	Pyrodigal	gene	2495401	2495637	.	-	.	ID=GCA000160335_02473_gene;locus_tag=GCA000160335_02473
contig_1	Pyrodigal	CDS	2495401	2495637	.	-	0	ID=GCA000160335_02473;Name=Membrane protein;locus_tag=GCA000160335_02473;product=Membrane protein;Parent=GCA000160335_02473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD51E,UniRef:UniRef100_A0A7Z7W2Z7,UniRef:UniRef50_A0A7Z7W2Z7,UniRef:UniRef90_A0A7Z7W2Z7
contig_1	Pyrodigal	gene	2495738	2495827	.	-	.	ID=GCA000160335_02474_gene;locus_tag=GCA000160335_02474
contig_1	Pyrodigal	CDS	2495738	2495827	.	-	0	ID=GCA000160335_02474;Name=Tandem-type lipoprotein;locus_tag=GCA000160335_02474;product=Tandem-type lipoprotein;Parent=GCA000160335_02474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001CF7327,UniRef:UniRef100_A0A7Z7W2K9,UniRef:UniRef50_A0A7Z7W2K9,UniRef:UniRef90_A0A7Z7W2K9
contig_1	Pyrodigal	gene	2495854	2496264	.	-	.	ID=GCA000160335_02475_gene;locus_tag=GCA000160335_02475
contig_1	Pyrodigal	CDS	2495854	2496264	.	-	0	ID=GCA000160335_02475;Name=Membrane protein;locus_tag=GCA000160335_02475;product=Membrane protein;Parent=GCA000160335_02475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000914139.1,SO:0001217,UniParc:UPI00003B1966,UniRef:UniRef100_A0A7Z7W3X2,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_A0A077UGQ3
contig_1	Pyrodigal	gene	2496542	2496964	.	-	.	ID=GCA000160335_02476_gene;locus_tag=GCA000160335_02476
contig_1	Pyrodigal	CDS	2496542	2496964	.	-	0	ID=GCA000160335_02476;Name=DUF1433 domain-containing protein;locus_tag=GCA000160335_02476;product=DUF1433 domain-containing protein;Parent=GCA000160335_02476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000162204.1,SO:0001217,UniParc:UPI00003B1967,UniRef:UniRef100_A0A7Z7R0S2,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_Q2FVD6
contig_1	Pyrodigal	gene	2497216	2497911	.	-	.	ID=GCA000160335_02477_gene;locus_tag=GCA000160335_02477;gene=ydfG
contig_1	Pyrodigal	CDS	2497216	2497911	.	-	0	ID=GCA000160335_02477;Name=putative oxidoreductase SAOUHSC_02778;locus_tag=GCA000160335_02477;product=putative oxidoreductase SAOUHSC_02778;Dbxref=GO:0016491;gene=ydfG;Parent=GCA000160335_02477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_000217452.1,SO:0001217,UniParc:UPI00003B1968,UniRef:UniRef100_Q6GDV6,UniRef:UniRef50_Q2FVD5,UniRef:UniRef90_Q2FVD5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2498210	2498491	.	+	.	ID=GCA000160335_02478_gene;locus_tag=GCA000160335_02478
contig_1	Pyrodigal	CDS	2498210	2498491	.	+	0	ID=GCA000160335_02478;Name=DUF1413 domain-containing protein;locus_tag=GCA000160335_02478;product=DUF1413 domain-containing protein;Parent=GCA000160335_02478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220932.1,SO:0001217,UniParc:UPI00003B1969,UniRef:UniRef100_A0A7Z7R0K8,UniRef:UniRef50_Q2FVD4,UniRef:UniRef90_Q2FVD4
contig_1	Pyrodigal	gene	2498749	2498940	.	-	.	ID=GCA000160335_02479_gene;locus_tag=GCA000160335_02479
contig_1	Pyrodigal	CDS	2498749	2498940	.	-	0	ID=GCA000160335_02479;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000160335_02479;product=HTH cro/C1-type domain-containing protein;Parent=GCA000160335_02479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224379.1,SO:0001217,UniParc:UPI00000D788C,UniRef:UniRef100_Q2FVD2,UniRef:UniRef50_S2YA76,UniRef:UniRef90_Q2FVD2
contig_1	Infernal	gene	2499151	2499225	.	+	.	ID=GCA000160335_02480_gene;locus_tag=GCA000160335_02480;gene=sau-19
contig_1	Infernal	ncRNA	2499151	2499225	4.5e-20	+	.	ID=GCA000160335_02480;Name=Staphylococcus sRNA sau-19;locus_tag=GCA000160335_02480;product=Staphylococcus sRNA sau-19;Dbxref=RFAM:RF02386;Parent=GCA000160335_02480_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02386
contig_1	Pyrodigal	gene	2499501	2500295	.	-	.	ID=GCA000160335_02481_gene;locus_tag=GCA000160335_02481
contig_1	Pyrodigal	CDS	2499501	2500295	.	-	0	ID=GCA000160335_02481;Name=putative protein SACOL2493;locus_tag=GCA000160335_02481;product=putative protein SACOL2493;Dbxref=GO:0005886;Parent=GCA000160335_02481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000616191.1,SO:0001217,UniParc:UPI00003B196A,UniRef:UniRef100_Q6GDV3,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_Q2FVD0
contig_1	Pyrodigal	gene	2500405	2500782	.	-	.	ID=GCA000160335_02482_gene;locus_tag=GCA000160335_02482
contig_1	Pyrodigal	CDS	2500405	2500782	.	-	0	ID=GCA000160335_02482;Name=Staphylococcal tandem lipoprotein;locus_tag=GCA000160335_02482;product=Staphylococcal tandem lipoprotein;Parent=GCA000160335_02482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001643639.1,SO:0001217,UniParc:UPI0001B701A1,UniRef:UniRef100_A0A7Z7R100,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_A0A7Z7R100
contig_1	Pyrodigal	gene	2500731	2501165	.	-	.	ID=GCA000160335_02483_gene;locus_tag=GCA000160335_02483
contig_1	Pyrodigal	CDS	2500731	2501165	.	-	0	ID=GCA000160335_02483;Name=Tandem-type lipoprotein;locus_tag=GCA000160335_02483;product=Tandem-type lipoprotein;Parent=GCA000160335_02483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1XB94,UniRef:UniRef90_A0A0E1XB94
contig_1	Pyrodigal	gene	2501275	2502051	.	-	.	ID=GCA000160335_02484_gene;locus_tag=GCA000160335_02484
contig_1	Pyrodigal	CDS	2501275	2502051	.	-	0	ID=GCA000160335_02484;Name=putative lipoprotein SAS2375;locus_tag=GCA000160335_02484;product=putative lipoprotein SAS2375;Dbxref=GO:0005886;Parent=GCA000160335_02484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573692.1,SO:0001217,UniParc:UPI00003B196B,UniRef:UniRef100_Q6GDV2,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_Q8NUV6
contig_1	Pyrodigal	gene	2502355	2505216	.	-	.	ID=GCA000160335_02485_gene;locus_tag=GCA000160335_02485
contig_1	Pyrodigal	CDS	2502355	2505216	.	-	0	ID=GCA000160335_02485;Name=DUF3427 domain-containing protein;locus_tag=GCA000160335_02485;product=DUF3427 domain-containing protein;Parent=GCA000160335_02485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088715.1,SO:0001217,UniParc:UPI00003B196C,UniRef:UniRef100_A0A7Z7R0T2,UniRef:UniRef50_A0A380HJB7,UniRef:UniRef90_Q2FVC3
contig_1	Pyrodigal	gene	2505218	2505610	.	-	.	ID=GCA000160335_02486_gene;locus_tag=GCA000160335_02486;gene=mutT
contig_1	Pyrodigal	CDS	2505218	2505610	.	-	0	ID=GCA000160335_02486;Name=8-oxo-dGTP diphosphatase;locus_tag=GCA000160335_02486;product=8-oxo-dGTP diphosphatase;gene=mutT;Parent=GCA000160335_02486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000755954.1,SO:0001217,UniParc:UPI00003B196D,UniRef:UniRef100_Q2FVC2,UniRef:UniRef50_A0A3A5KZ23,UniRef:UniRef90_A0A3A5KZ23
contig_1	Pyrodigal	gene	2505898	2507535	.	+	.	ID=GCA000160335_02487_gene;locus_tag=GCA000160335_02487;gene=pgcA
contig_1	Pyrodigal	CDS	2505898	2507535	.	+	0	ID=GCA000160335_02487;Name=Phosphoglucomutase;locus_tag=GCA000160335_02487;product=Phosphoglucomutase;Dbxref=GO:0000287,GO:0004614,GO:0006006,GO:0006166,GO:0008973,GO:0009246;gene=pgcA;Parent=GCA000160335_02487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,SO:0001217,UniParc:UPI00019F4DBC,UniRef:UniRef100_A0A0E1XDH6,UniRef:UniRef50_Q2FVC1,UniRef:UniRef90_Q2FVC1;ec_number=5.4.2.2
contig_1	Pyrodigal	gene	2507819	2508085	.	+	.	ID=GCA000160335_02488_gene;locus_tag=GCA000160335_02488
contig_1	Pyrodigal	CDS	2507819	2508085	.	+	0	ID=GCA000160335_02488;Name=Secreted protein;locus_tag=GCA000160335_02488;product=Secreted protein;Parent=GCA000160335_02488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678764.1,SO:0001217,UniParc:UPI000005487E,UniRef:UniRef100_Q2FVC0,UniRef:UniRef50_A0A2K4AFJ0,UniRef:UniRef90_A0A2K4AFJ0
contig_1	Pyrodigal	gene	2508229	2508537	.	+	.	ID=GCA000160335_02489_gene;locus_tag=GCA000160335_02489
contig_1	Pyrodigal	CDS	2508229	2508537	.	+	0	ID=GCA000160335_02489;Name=DUF3784 domain-containing protein;locus_tag=GCA000160335_02489;product=DUF3784 domain-containing protein;Parent=GCA000160335_02489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001573690.1,SO:0001217,UniParc:UPI00003B196F,UniRef:UniRef100_A0A7Z7W2S0,UniRef:UniRef50_Q2G2B5,UniRef:UniRef90_Q2G2B5
contig_1	Pyrodigal	gene	2508664	2509530	.	-	.	ID=GCA000160335_02490_gene;locus_tag=GCA000160335_02490;gene=galU
contig_1	Pyrodigal	CDS	2508664	2509530	.	-	0	ID=GCA000160335_02490;Name=UTP--glucose-1-phosphate uridylyltransferase GalU;locus_tag=GCA000160335_02490;product=UTP--glucose-1-phosphate uridylyltransferase GalU;Dbxref=GO:0003983,GO:0006011,GO:0009246;gene=galU;Parent=GCA000160335_02490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,RefSeq:WP_000721337.1,SO:0001217,UniParc:UPI00000D9FE6,UniRef:UniRef100_Q8NUU9,UniRef:UniRef50_Q2G1T6,UniRef:UniRef90_Q2G1T6;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	2509710	2512439	.	-	.	ID=GCA000160335_02491_gene;locus_tag=GCA000160335_02491;gene=fnbB
contig_1	Pyrodigal	CDS	2509710	2512439	.	-	0	ID=GCA000160335_02491;Name=fibronectin-binding protein FnbB;locus_tag=GCA000160335_02491;product=fibronectin-binding protein FnbB;gene=fnbB;Parent=GCA000160335_02491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566815,RefSeq:WP_000841430.1,SO:0001217,UniParc:UPI0001B70045,UniRef:UniRef100_A0A7Z7W2L3,UniRef:UniRef50_A0A390ZLD1,UniRef:UniRef90_A0A390ZLD1
contig_1	Pyrodigal	gene	2513122	2516250	.	-	.	ID=GCA000160335_02492_gene;locus_tag=GCA000160335_02492;gene=fnbA
contig_1	Pyrodigal	CDS	2513122	2516250	.	-	0	ID=GCA000160335_02492;Name=fibronectin-binding protein FnbA;locus_tag=GCA000160335_02492;product=fibronectin-binding protein FnbA;gene=fnbA;Parent=GCA000160335_02492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000794642.1,SO:0001217,UniParc:UPI00038DC8A2,UniRef:UniRef100_UPI00038DC8A2,UniRef:UniRef50_Q99RD2,UniRef:UniRef90_UPI00038DC8A2
contig_1	Pyrodigal	gene	2516718	2518076	.	-	.	ID=GCA000160335_02493_gene;locus_tag=GCA000160335_02493
contig_1	Pyrodigal	CDS	2516718	2518076	.	-	0	ID=GCA000160335_02493;Name=Gluconate permease;locus_tag=GCA000160335_02493;product=Gluconate permease;Parent=GCA000160335_02493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000481410.1,SO:0001217,UniParc:UPI00003B1973,UniRef:UniRef100_A0A7Z7R0T0,UniRef:UniRef50_O31862,UniRef:UniRef90_A0A0U1MU69
contig_1	Pyrodigal	gene	2518193	2519746	.	-	.	ID=GCA000160335_02494_gene;locus_tag=GCA000160335_02494;gene=gntK
contig_1	Pyrodigal	CDS	2518193	2519746	.	-	0	ID=GCA000160335_02494;Name=gluconokinase;locus_tag=GCA000160335_02494;product=gluconokinase;Dbxref=GO:0009255,GO:0019521,GO:0046316;gene=gntK;Parent=GCA000160335_02494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K25031,RefSeq:WP_000876648.1,SO:0001217,UniParc:UPI0001B70047,UniRef:UniRef100_UPI0001B70047,UniRef:UniRef50_A0A1X1FDN6,UniRef:UniRef90_A0A077UL99;ec_number=2.7.1.12
contig_1	Pyrodigal	gene	2519771	2520451	.	-	.	ID=GCA000160335_02495_gene;locus_tag=GCA000160335_02495;gene=gntR
contig_1	Pyrodigal	CDS	2519771	2520451	.	-	0	ID=GCA000160335_02495;Name=FCD domain-containing protein;locus_tag=GCA000160335_02495;product=FCD domain-containing protein;gene=gntR;Parent=GCA000160335_02495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1802,COG:K,KEGG:K11476,RefSeq:WP_000990133.1,SO:0001217,UniParc:UPI00000522E1,UniRef:UniRef100_Q2G208,UniRef:UniRef50_A0A239YRW4,UniRef:UniRef90_A0A0U1MT80
contig_1	Pyrodigal	gene	2520638	2521369	.	-	.	ID=GCA000160335_02496_gene;locus_tag=GCA000160335_02496;gene=soxR
contig_1	Pyrodigal	CDS	2520638	2521369	.	-	0	ID=GCA000160335_02496;Name=HTH merR-type domain-containing protein;locus_tag=GCA000160335_02496;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000160335_02496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000074001.1,SO:0001217,UniParc:UPI00003B1975,UniRef:UniRef100_A0A7Z7R0M0,UniRef:UniRef50_Q2G2L8,UniRef:UniRef90_Q2G2L8
contig_1	Pyrodigal	gene	2521534	2522226	.	-	.	ID=GCA000160335_02497_gene;locus_tag=GCA000160335_02497;gene=yjbM
contig_1	Pyrodigal	CDS	2521534	2522226	.	-	0	ID=GCA000160335_02497;Name=GTP pyrophosphokinase YwaC;locus_tag=GCA000160335_02497;product=GTP pyrophosphokinase YwaC;gene=yjbM;Parent=GCA000160335_02497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_000289134.1,SO:0001217,UniParc:UPI00003B1976,UniRef:UniRef100_A0A7Z7R0N8,UniRef:UniRef50_A0A240A5W9,UniRef:UniRef90_A0A7U7JRL0
contig_1	Pyrodigal	gene	2522457	2522873	.	-	.	ID=GCA000160335_02498_gene;locus_tag=GCA000160335_02498;gene=ydaT
contig_1	Pyrodigal	CDS	2522457	2522873	.	-	0	ID=GCA000160335_02498;Name=DUF2188 domain-containing protein;locus_tag=GCA000160335_02498;product=DUF2188 domain-containing protein;gene=ydaT;Parent=GCA000160335_02498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4876,COG:S,RefSeq:WP_001117052.1,SO:0001217,UniParc:UPI0001EFF1D6,UniRef:UniRef100_A0A7U7EWJ5,UniRef:UniRef50_Q2G2L6,UniRef:UniRef90_Q2G2L6
contig_1	Pyrodigal	gene	2523012	2524835	.	-	.	ID=GCA000160335_02499_gene;locus_tag=GCA000160335_02499;gene=yccC
contig_1	Pyrodigal	CDS	2523012	2524835	.	-	0	ID=GCA000160335_02499;Name=Integral membrane bound transporter domain-containing protein;locus_tag=GCA000160335_02499;product=Integral membrane bound transporter domain-containing protein;gene=yccC;Parent=GCA000160335_02499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_000586376.1,SO:0001217,UniParc:UPI00019CD4E3,UniRef:UniRef100_A0A7Z7R1D1,UniRef:UniRef50_A0A853V3T2,UniRef:UniRef90_A0A0H3JXE4
contig_1	Pyrodigal	gene	2525312	2526589	.	-	.	ID=GCA000160335_02500_gene;locus_tag=GCA000160335_02500;gene=uhpC
contig_1	Pyrodigal	CDS	2525312	2526589	.	-	0	ID=GCA000160335_02500;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000160335_02500;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=uhpC;Parent=GCA000160335_02500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_000660709.1,SO:0001217,UniParc:UPI0000054892,UniRef:UniRef100_Q2FVB9,UniRef:UniRef50_Q2FVB9,UniRef:UniRef90_Q2FVB9
contig_1	Pyrodigal	gene	2527136	2527747	.	+	.	ID=GCA000160335_02501_gene;locus_tag=GCA000160335_02501;gene=uptA
contig_1	Pyrodigal	CDS	2527136	2527747	.	+	0	ID=GCA000160335_02501;Name=Undecaprenyl phosphate transporter A;locus_tag=GCA000160335_02501;product=Undecaprenyl phosphate transporter A;Dbxref=GO:0005886,GO:0071555;gene=uptA;Parent=GCA000160335_02501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000435044.1,SO:0001217,UniParc:UPI0000054893,UniRef:UniRef100_Q2FVB8,UniRef:UniRef50_Q2FVB8,UniRef:UniRef90_Q2FVB8
contig_1	Pyrodigal	gene	2527978	2528490	.	-	.	ID=GCA000160335_02502_gene;locus_tag=GCA000160335_02502;gene=lysE
contig_1	Pyrodigal	CDS	2527978	2528490	.	-	0	ID=GCA000160335_02502;Name=Translocator protein%2C LysE family;locus_tag=GCA000160335_02502;product=Translocator protein%2C LysE family;gene=lysE;Parent=GCA000160335_02502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06895,RefSeq:WP_001793878.1,SO:0001217,UniParc:UPI0001B7034C,UniRef:UniRef100_A0A0E1XDG1,UniRef:UniRef50_Q2G1T0,UniRef:UniRef90_A0A0E1XDG1
contig_1	Pyrodigal	gene	2528591	2529571	.	-	.	ID=GCA000160335_02503_gene;locus_tag=GCA000160335_02503
contig_1	Pyrodigal	CDS	2528591	2529571	.	-	0	ID=GCA000160335_02503;Name=Fatty acid desaturase;locus_tag=GCA000160335_02503;product=Fatty acid desaturase;Parent=GCA000160335_02503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000172879.1,SO:0001217,UniParc:UPI00003B197A,UniRef:UniRef100_A0A7Z7W2N1,UniRef:UniRef50_A0A2X2K818,UniRef:UniRef90_A0A2X2K818
contig_1	Pyrodigal	gene	2529670	2531082	.	+	.	ID=GCA000160335_02504_gene;locus_tag=GCA000160335_02504;gene=norG
contig_1	Pyrodigal	CDS	2529670	2531082	.	+	0	ID=GCA000160335_02504;Name=HTH-type transcriptional regulator NorG;locus_tag=GCA000160335_02504;product=HTH-type transcriptional regulator NorG;gene=norG;Parent=GCA000160335_02504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000160058.1,SO:0001217,UniParc:UPI00003B197B,UniRef:UniRef100_A0A0E1XCW7,UniRef:UniRef50_A0A380HNP7,UniRef:UniRef90_A0A0E1XCW7
contig_1	Pyrodigal	gene	2531768	2532463	.	+	.	ID=GCA000160335_02505_gene;locus_tag=GCA000160335_02505;gene=rbbA
contig_1	Pyrodigal	CDS	2531768	2532463	.	+	0	ID=GCA000160335_02505;Name=ABC transporter domain-containing protein;locus_tag=GCA000160335_02505;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000160335_02505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000382892.1,SO:0001217,UniParc:UPI00003B197C,UniRef:UniRef100_A0A7Z7W306,UniRef:UniRef50_Q2FVB4,UniRef:UniRef90_Q2FVB4
contig_1	Pyrodigal	gene	2532465	2533235	.	+	.	ID=GCA000160335_02506_gene;locus_tag=GCA000160335_02506
contig_1	Pyrodigal	CDS	2532465	2533235	.	+	0	ID=GCA000160335_02506;Name=Membrane spanning protein%2C putative;locus_tag=GCA000160335_02506;product=Membrane spanning protein%2C putative;Parent=GCA000160335_02506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000536961.1,SO:0001217,UniParc:UPI0000054897,UniRef:UniRef100_Q2FVB3,UniRef:UniRef50_K9AVH9,UniRef:UniRef90_Q2FVB3
contig_1	Pyrodigal	gene	2533740	2535704	.	+	.	ID=GCA000160335_02507_gene;locus_tag=GCA000160335_02507;gene=fbp
contig_1	Pyrodigal	CDS	2533740	2535704	.	+	0	ID=GCA000160335_02507;Name=Fructose-1%2C6-bisphosphatase class 3;locus_tag=GCA000160335_02507;product=Fructose-1%2C6-bisphosphatase class 3;Dbxref=GO:0006094,GO:0042132;gene=fbp;Parent=GCA000160335_02507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04041,RefSeq:WP_000192183.1,SO:0001217,UniParc:UPI00003B197D,UniRef:UniRef100_Q6GDS9,UniRef:UniRef50_Q2FVB2,UniRef:UniRef90_Q6GDS9;ec_number=3.1.3.11
contig_1	Pyrodigal	gene	2536048	2537127	.	+	.	ID=GCA000160335_02508_gene;locus_tag=GCA000160335_02508;gene=ykvI
contig_1	Pyrodigal	CDS	2536048	2537127	.	+	0	ID=GCA000160335_02508;Name=Branched-chain amino acid transport system carrier protein;locus_tag=GCA000160335_02508;product=Branched-chain amino acid transport system carrier protein;gene=ykvI;Parent=GCA000160335_02508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_001573681.1,SO:0001217,UniParc:UPI00003B197E,UniRef:UniRef100_A0A7Z7R0U2,UniRef:UniRef50_Q2FVB0,UniRef:UniRef90_Q2FVB0
contig_1	Pyrodigal	gene	2537232	2537825	.	-	.	ID=GCA000160335_02509_gene;locus_tag=GCA000160335_02509;gene=mhqD
contig_1	Pyrodigal	CDS	2537232	2537825	.	-	0	ID=GCA000160335_02509;Name=methylhydroquinone degradation carboxylesterase MhqD;locus_tag=GCA000160335_02509;product=methylhydroquinone degradation carboxylesterase MhqD;gene=mhqD;Parent=GCA000160335_02509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0400,COG:R,RefSeq:WP_000400028.1,SO:0001217,UniParc:UPI00019CD4E0,UniRef:UniRef100_A0A7U7IE82,UniRef:UniRef50_Q2FVA9,UniRef:UniRef90_Q2FVA9
contig_1	Pyrodigal	gene	2537847	2538815	.	-	.	ID=GCA000160335_02510_gene;locus_tag=GCA000160335_02510;gene=gloA
contig_1	Pyrodigal	CDS	2537847	2538815	.	-	0	ID=GCA000160335_02510;Name=Dioxygenase;locus_tag=GCA000160335_02510;product=Dioxygenase;gene=gloA;Parent=GCA000160335_02510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,KEGG:K15975,RefSeq:WP_000183734.1,SO:0001217,UniParc:UPI00003B1980,UniRef:UniRef100_A0AAJ5CS54,UniRef:UniRef50_F4BQ31,UniRef:UniRef90_A0A3A5LQ32
contig_1	Pyrodigal	gene	2538893	2539327	.	-	.	ID=GCA000160335_02511_gene;locus_tag=GCA000160335_02511;gene=marR
contig_1	Pyrodigal	CDS	2538893	2539327	.	-	0	ID=GCA000160335_02511;Name=HTH marR-type domain-containing protein;locus_tag=GCA000160335_02511;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000160335_02511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000376235.1,SO:0001217,UniParc:UPI000005489B,UniRef:UniRef100_Q2FVA7,UniRef:UniRef50_Q2FVA7,UniRef:UniRef90_Q2FVA7
contig_1	Pyrodigal	gene	2539553	2539837	.	+	.	ID=GCA000160335_02512_gene;locus_tag=GCA000160335_02512;gene=yidJ
contig_1	Pyrodigal	CDS	2539553	2539837	.	+	0	ID=GCA000160335_02512;Name=Acetyltransferase;locus_tag=GCA000160335_02512;product=Acetyltransferase;gene=yidJ;Parent=GCA000160335_02512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_000067112.1,SO:0001217,UniParc:UPI00000D9FF4,UniRef:UniRef100_A0A7U7EWB4,UniRef:UniRef50_A0A1E9A8Y1,UniRef:UniRef90_A0A7U7JRC7
contig_1	Pyrodigal	gene	2540012	2540818	.	+	.	ID=GCA000160335_02513_gene;locus_tag=GCA000160335_02513;gene=catE
contig_1	Pyrodigal	CDS	2540012	2540818	.	+	0	ID=GCA000160335_02513;Name=Glyoxalase;locus_tag=GCA000160335_02513;product=Glyoxalase;gene=catE;Parent=GCA000160335_02513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_000863968.1,SO:0001217,UniParc:UPI00000CACE7,UniRef:UniRef100_A0A7Z7R118,UniRef:UniRef50_A0A6L9GI04,UniRef:UniRef90_A0A0S2JAB5
contig_1	Pyrodigal	gene	2540939	2541610	.	-	.	ID=GCA000160335_02514_gene;locus_tag=GCA000160335_02514;gene=nfnB
contig_1	Pyrodigal	CDS	2540939	2541610	.	-	0	ID=GCA000160335_02514;Name=Putative NAD(P)H nitroreductase SAB2397c;locus_tag=GCA000160335_02514;product=Putative NAD(P)H nitroreductase SAB2397c;Dbxref=GO:0005829,GO:0046256,GO:0046857;gene=nfnB;Parent=GCA000160335_02514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000069098.1,SO:0001217,UniParc:UPI00000D779D,UniRef:UniRef100_Q7A3H8,UniRef:UniRef50_Q4A087,UniRef:UniRef90_Q2FVA4;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2541880	2542872	.	+	.	ID=GCA000160335_02515_gene;locus_tag=GCA000160335_02515;gene=ldhD
contig_1	Pyrodigal	CDS	2541880	2542872	.	+	0	ID=GCA000160335_02515;Name=D-lactate dehydrogenase;locus_tag=GCA000160335_02515;product=D-lactate dehydrogenase;Dbxref=GO:0008720,GO:0051287;gene=ldhD;Parent=GCA000160335_02515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000161541.1,SO:0001217,UniParc:UPI00003B1983,UniRef:UniRef100_Q6GDS2,UniRef:UniRef50_P63940,UniRef:UniRef90_P63940;ec_number=1.1.1.28
contig_1	Infernal	gene	2543013	2543243	.	-	.	ID=GCA000160335_02516_gene;locus_tag=GCA000160335_02516;gene=tsr24
contig_1	Infernal	ncRNA	2543013	2543243	3e-26	-	.	ID=GCA000160335_02516;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_02516;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_02516_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2543971	2544771	.	-	.	ID=GCA000160335_02517_gene;locus_tag=GCA000160335_02517;gene=cof
contig_1	Pyrodigal	CDS	2543971	2544771	.	-	0	ID=GCA000160335_02517;Name=HAD family hydrolase;locus_tag=GCA000160335_02517;product=HAD family hydrolase;gene=cof;Parent=GCA000160335_02517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000237521.1,SO:0001217,UniParc:UPI00003B1984,UniRef:UniRef100_A0A0E1XCV3,UniRef:UniRef50_Q2FVA2,UniRef:UniRef90_Q2FVA2
contig_1	Pyrodigal	gene	2545001	2545621	.	-	.	ID=GCA000160335_02518_gene;locus_tag=GCA000160335_02518;gene=srtA
contig_1	Pyrodigal	CDS	2545001	2545621	.	-	0	ID=GCA000160335_02518;Name=class A sortase SrtA;locus_tag=GCA000160335_02518;product=class A sortase SrtA;Dbxref=GO:0005886,GO:0006508,GO:0008234,GO:0046872;gene=srtA;Parent=GCA000160335_02518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000759361,COG:COG3764,COG:M,RefSeq:WP_000759366.1,SO:0001217,UniParc:UPI00000CAB21,UniRef:UniRef100_A0A6G4Z306,UniRef:UniRef50_Q2FV99,UniRef:UniRef90_Q2FV99;ec_number=3.4.22.70
contig_1	Pyrodigal	gene	2545815	2546306	.	+	.	ID=GCA000160335_02519_gene;locus_tag=GCA000160335_02519;gene=mnaT
contig_1	Pyrodigal	CDS	2545815	2546306	.	+	0	ID=GCA000160335_02519;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02519;product=N-acetyltransferase domain-containing protein;gene=mnaT;Parent=GCA000160335_02519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1247,COG:E,KEGG:K24217,RefSeq:WP_000617348.1,SO:0001217,UniParc:UPI00003B1985,UniRef:UniRef100_A0A7Z7W2N6,UniRef:UniRef50_Q2FV98,UniRef:UniRef90_Q2FV98;ec_number=2.3.1.-
contig_1	Infernal	gene	2546578	2546803	.	-	.	ID=GCA000160335_02520_gene;locus_tag=GCA000160335_02520;gene=tsr24
contig_1	Infernal	ncRNA	2546578	2546803	1.1e-28	-	.	ID=GCA000160335_02520;Name=S. aureus tsr24 small RNA;locus_tag=GCA000160335_02520;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000160335_02520_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2546793	2548439	.	+	.	ID=GCA000160335_02521_gene;locus_tag=GCA000160335_02521;gene=tnp
contig_1	Pyrodigal	CDS	2546793	2548439	.	+	0	ID=GCA000160335_02521;Name=IS1182 family ISSau3 transposase;locus_tag=GCA000160335_02521;product=IS1182 family ISSau3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000160335_02521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau3,KEGG:K07487,RefSeq:WP_000277741.1,SO:0001217,UniParc:UPI00003B165B,UniRef:UniRef100_A0A7Z7QYN2,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Infernal	gene	2548370	2548622	.	+	.	ID=GCA000160335_02522_gene;locus_tag=GCA000160335_02522;gene=S35
contig_1	Infernal	ncRNA	2548370	2548622	8.7e-18	+	.	ID=GCA000160335_02522;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02522;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02522_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2548672	2548842	.	-	.	ID=GCA000160335_02523_gene;locus_tag=GCA000160335_02523
contig_1	Pyrodigal	CDS	2548672	2548842	.	-	0	ID=GCA000160335_02523;Name=Mobilization protein;locus_tag=GCA000160335_02523;product=Mobilization protein;Parent=GCA000160335_02523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549802.1,SO:0001217,UniParc:UPI00000D9FFB,UniRef:UniRef100_Q2FV97,UniRef:UniRef50_A0A1D4MSI6,UniRef:UniRef90_Q2FV97
contig_1	Pyrodigal	gene	2549021	2549920	.	-	.	ID=GCA000160335_02524_gene;locus_tag=GCA000160335_02524;gene=sdaAA
contig_1	Pyrodigal	CDS	2549021	2549920	.	-	0	ID=GCA000160335_02524;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;locus_tag=GCA000160335_02524;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAA;Parent=GCA000160335_02524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000460421.1,SO:0001217,UniParc:UPI0000052255,UniRef:UniRef100_Q2FV95,UniRef:UniRef50_A0AAN1D8A6,UniRef:UniRef90_A0A2K4ALL6;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2549934	2550614	.	-	.	ID=GCA000160335_02525_gene;locus_tag=GCA000160335_02525;gene=sdaAB
contig_1	Pyrodigal	CDS	2549934	2550614	.	-	0	ID=GCA000160335_02525;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;locus_tag=GCA000160335_02525;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAB;Parent=GCA000160335_02525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_001140238.1,SO:0001217,UniParc:UPI00003B1986,UniRef:UniRef100_A0A7Z7W2M1,UniRef:UniRef50_A0A0U1E0K5,UniRef:UniRef90_A0A2K4ALQ3;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2550617	2551660	.	-	.	ID=GCA000160335_02526_gene;locus_tag=GCA000160335_02526;gene=frwC
contig_1	Pyrodigal	CDS	2550617	2551660	.	-	0	ID=GCA000160335_02526;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000160335_02526;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000160335_02526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,RefSeq:WP_000353634.1,SO:0001217,UniParc:UPI00000548AA,UniRef:UniRef100_Q2FV93,UniRef:UniRef50_Q2FV93,UniRef:UniRef90_Q2FV93
contig_1	Pyrodigal	gene	2552210	2552413	.	+	.	ID=GCA000160335_02527_gene;locus_tag=GCA000160335_02527
contig_1	Pyrodigal	CDS	2552210	2552413	.	+	0	ID=GCA000160335_02527;Name=hypothetical protein;locus_tag=GCA000160335_02527;product=hypothetical protein;Parent=GCA000160335_02527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001177186.1,SO:0001217,UniParc:UPI00000D76CD,UniRef:UniRef100_Q2FV92,UniRef:UniRef50_Q2FV92,UniRef:UniRef90_Q2FV92
contig_1	Pyrodigal	gene	2552610	2553533	.	+	.	ID=GCA000160335_02528_gene;locus_tag=GCA000160335_02528;gene=rhaT
contig_1	Pyrodigal	CDS	2552610	2553533	.	+	0	ID=GCA000160335_02528;Name=EamA domain-containing protein;locus_tag=GCA000160335_02528;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000160335_02528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,SO:0001217,UniParc:UPI0001D16A1B,UniRef:UniRef100_A0A7Z7R1A6,UniRef:UniRef50_Q2FV91,UniRef:UniRef90_Q2FV91
contig_1	Pyrodigal	gene	2553614	2554582	.	-	.	ID=GCA000160335_02529_gene;locus_tag=GCA000160335_02529;gene=aes
contig_1	Pyrodigal	CDS	2553614	2554582	.	-	0	ID=GCA000160335_02529;Name=Alpha/beta hydrolase;locus_tag=GCA000160335_02529;product=Alpha/beta hydrolase;gene=aes;Parent=GCA000160335_02529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001228158.1,SO:0001217,UniParc:UPI00003B1988,UniRef:UniRef100_A0A7Z7R0N7,UniRef:UniRef50_A0A3A3AIJ1,UniRef:UniRef90_A0A3A3AIJ1
contig_1	Pyrodigal	gene	2554703	2555059	.	-	.	ID=GCA000160335_02530_gene;locus_tag=GCA000160335_02530
contig_1	Pyrodigal	CDS	2554703	2555059	.	-	0	ID=GCA000160335_02530;Name=Thioredoxin domain-containing protein;locus_tag=GCA000160335_02530;product=Thioredoxin domain-containing protein;Parent=GCA000160335_02530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000240663.1,SO:0001217,UniParc:UPI00000CAD16,UniRef:UniRef100_Q2FV89,UniRef:UniRef50_Q2FV89,UniRef:UniRef90_Q2FV89
contig_1	Pyrodigal	gene	2555101	2555511	.	-	.	ID=GCA000160335_02531_gene;locus_tag=GCA000160335_02531;gene=fadM
contig_1	Pyrodigal	CDS	2555101	2555511	.	-	0	ID=GCA000160335_02531;Name=Acyl-CoA thioesterase;locus_tag=GCA000160335_02531;product=Acyl-CoA thioesterase;gene=fadM;Parent=GCA000160335_02531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000206033.1,SO:0001217,UniParc:UPI00000548B0,UniRef:UniRef100_Q2FV88,UniRef:UniRef50_Q2FV88,UniRef:UniRef90_Q2FV88
contig_1	Pyrodigal	gene	2555891	2558014	.	-	.	ID=GCA000160335_02532_gene;locus_tag=GCA000160335_02532;gene=glcB
contig_1	Pyrodigal	CDS	2555891	2558014	.	-	0	ID=GCA000160335_02532;Name=PTS system glucoside-specific EIICBA component;locus_tag=GCA000160335_02532;product=PTS system glucoside-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=glcB;Parent=GCA000160335_02532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,SO:0001217,UniParc:UPI0002CB7216,UniRef:UniRef100_Q6GDR0,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2FV87
contig_1	Pyrodigal	gene	2558257	2559996	.	-	.	ID=GCA000160335_02533_gene;locus_tag=GCA000160335_02533;gene=ilvB
contig_1	Pyrodigal	CDS	2558257	2559996	.	-	0	ID=GCA000160335_02533;Name=pyruvate oxidase;locus_tag=GCA000160335_02533;product=pyruvate oxidase;Dbxref=GO:0000287,GO:0030976;gene=ilvB;Parent=GCA000160335_02533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K00158,RefSeq:WP_001062662.1,SO:0001217,UniParc:UPI00019CD4A7,UniRef:UniRef100_A0A7Z7R1F3,UniRef:UniRef50_A0A0D0QSZ0,UniRef:UniRef90_A0A142G9E0;ec_number=1.2.3.3
contig_1	Pyrodigal	gene	2560036	2560725	.	-	.	ID=GCA000160335_02534_gene;locus_tag=GCA000160335_02534;gene=cidB
contig_1	Pyrodigal	CDS	2560036	2560725	.	-	0	ID=GCA000160335_02534;Name=Holin-like protein CidB;locus_tag=GCA000160335_02534;product=Holin-like protein CidB;Dbxref=GO:0005886,GO:0031640;gene=cidB;Parent=GCA000160335_02534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_001001018.1,SO:0001217,UniParc:UPI00003B198B,UniRef:UniRef100_Q6GDQ8,UniRef:UniRef50_P60639,UniRef:UniRef90_P60639
contig_1	Pyrodigal	gene	2560718	2561113	.	-	.	ID=GCA000160335_02535_gene;locus_tag=GCA000160335_02535;gene=cidA
contig_1	Pyrodigal	CDS	2560718	2561113	.	-	0	ID=GCA000160335_02535;Name=holin-like murein hydrolase modulator CidA;locus_tag=GCA000160335_02535;product=holin-like murein hydrolase modulator CidA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=cidA;Parent=GCA000160335_02535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000549734,COG:COG1380,COG:R,RefSeq:WP_000549735.1,SO:0001217,UniParc:UPI00003B198C,UniRef:UniRef100_Q6GDQ7,UniRef:UniRef50_P60647,UniRef:UniRef90_P60647
contig_1	Pyrodigal	gene	2561327	2562190	.	-	.	ID=GCA000160335_02536_gene;locus_tag=GCA000160335_02536;gene=cidR
contig_1	Pyrodigal	CDS	2561327	2562190	.	-	0	ID=GCA000160335_02536;Name=cidABC operon transcriptional activator CidR;locus_tag=GCA000160335_02536;product=cidABC operon transcriptional activator CidR;gene=cidR;Parent=GCA000160335_02536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,SO:0001217,UniParc:UPI0001E0716E,UniRef:UniRef100_Q2FV83,UniRef:UniRef50_Q2FV83,UniRef:UniRef90_Q2FV83
contig_1	Pyrodigal	gene	2562372	2562590	.	+	.	ID=GCA000160335_02537_gene;locus_tag=GCA000160335_02537;gene=yozE
contig_1	Pyrodigal	CDS	2562372	2562590	.	+	0	ID=GCA000160335_02537;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000160335_02537;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000160335_02537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011687.1,SO:0001217,UniParc:UPI00000D775E,UniRef:UniRef100_Q2FV82,UniRef:UniRef50_Q2FV82,UniRef:UniRef90_Q2FV82
contig_1	Pyrodigal	gene	2562978	2563409	.	+	.	ID=GCA000160335_02538_gene;locus_tag=GCA000160335_02538;gene=lysM
contig_1	Pyrodigal	CDS	2562978	2563409	.	+	0	ID=GCA000160335_02538;Name=LysM domain protein;locus_tag=GCA000160335_02538;product=LysM domain protein;gene=lysM;Parent=GCA000160335_02538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000875614.1,SO:0001217,UniParc:UPI00019F4D95,UniRef:UniRef100_A0A7Z7W2T3,UniRef:UniRef50_Q2FV81,UniRef:UniRef90_Q2FV81
contig_1	Pyrodigal	gene	2563549	2564829	.	-	.	ID=GCA000160335_02539_gene;locus_tag=GCA000160335_02539;gene=hMG1
contig_1	Pyrodigal	CDS	2563549	2564829	.	-	0	ID=GCA000160335_02539;Name=hydroxymethylglutaryl-CoA reductase%2C degradative;locus_tag=GCA000160335_02539;product=hydroxymethylglutaryl-CoA reductase%2C degradative;Dbxref=GO:0004420,GO:0015936,GO:0016616;gene=hMG1;Parent=GCA000160335_02539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1257,COG:I,KEGG:K00054,RefSeq:WP_001191011.1,SO:0001217,UniParc:UPI00003B198E,UniRef:UniRef100_A0A7Z7W314,UniRef:UniRef50_B9DLB2,UniRef:UniRef90_A0A641A7V3;ec_number=1.1.1.88
contig_1	Pyrodigal	gene	2565084	2566250	.	+	.	ID=GCA000160335_02540_gene;locus_tag=GCA000160335_02540;gene=pksG
contig_1	Pyrodigal	CDS	2565084	2566250	.	+	0	ID=GCA000160335_02540;Name=hydroxymethylglutaryl-CoA synthase;locus_tag=GCA000160335_02540;product=hydroxymethylglutaryl-CoA synthase;Dbxref=GO:0004421;gene=pksG;Parent=GCA000160335_02540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3425,COG:I,KEGG:K01641,RefSeq:WP_000172190.1,SO:0001217,UniParc:UPI00003B198F,UniRef:UniRef100_A0A7Z7W2M8,UniRef:UniRef50_R3WMN8,UniRef:UniRef90_A0A2S6D8I9;ec_number=2.3.3.10
contig_1	Pyrodigal	gene	2566421	2566942	.	-	.	ID=GCA000160335_02541_gene;locus_tag=GCA000160335_02541;gene=adaB
contig_1	Pyrodigal	CDS	2566421	2566942	.	-	0	ID=GCA000160335_02541;Name=Methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA000160335_02541;product=Methylated-DNA--protein-cysteine methyltransferase;gene=adaB;Parent=GCA000160335_02541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0350,COG:L,RefSeq:WP_000262597.1,SO:0001217,UniParc:UPI00003B1990,UniRef:UniRef100_A0A0E1XLE0,UniRef:UniRef50_A0A3A5LJI7,UniRef:UniRef90_A0A3A5LJI7
contig_1	Pyrodigal	gene	2567305	2569410	.	+	.	ID=GCA000160335_02542_gene;locus_tag=GCA000160335_02542;gene=clpL
contig_1	Pyrodigal	CDS	2567305	2569410	.	+	0	ID=GCA000160335_02542;Name=ATP-dependent Clp protease ATP-binding subunit ClpL;locus_tag=GCA000160335_02542;product=ATP-dependent Clp protease ATP-binding subunit ClpL;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpL;Parent=GCA000160335_02542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058981,COG:COG0542,COG:O,KEGG:K04086,RefSeq:WP_001063330.1,SO:0001217,UniParc:UPI00003B1991,UniRef:UniRef100_Q6GDQ0,UniRef:UniRef50_Q2FV74,UniRef:UniRef90_Q2FV74
contig_1	Pyrodigal	gene	2569480	2569650	.	-	.	ID=GCA000160335_02543_gene;locus_tag=GCA000160335_02543
contig_1	Pyrodigal	CDS	2569480	2569650	.	-	0	ID=GCA000160335_02543;Name=FeoB-associated Cys-rich membrane protein;locus_tag=GCA000160335_02543;product=FeoB-associated Cys-rich membrane protein;Parent=GCA000160335_02543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000111116.1,SO:0001217,UniParc:UPI00003B1992,UniRef:UniRef100_A0A7Z7R0P6,UniRef:UniRef50_Q2FV73,UniRef:UniRef90_Q2FV73
contig_1	Pyrodigal	gene	2569663	2571657	.	-	.	ID=GCA000160335_02544_gene;locus_tag=GCA000160335_02544;gene=feoB
contig_1	Pyrodigal	CDS	2569663	2571657	.	-	0	ID=GCA000160335_02544;Name=ferrous iron transport protein B;locus_tag=GCA000160335_02544;product=ferrous iron transport protein B;Dbxref=GO:0005525,GO:0005886,GO:0006826,GO:0015093,GO:0016020;gene=feoB;Parent=GCA000160335_02544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0370,COG:P,RefSeq:WP_000432892.1,SO:0001217,UniParc:UPI00003B1993,UniRef:UniRef100_Q6GDP8,UniRef:UniRef50_Q99R86,UniRef:UniRef90_Q99R86
contig_1	Pyrodigal	gene	2571669	2571896	.	-	.	ID=GCA000160335_02545_gene;locus_tag=GCA000160335_02545;gene=feoA
contig_1	Pyrodigal	CDS	2571669	2571896	.	-	0	ID=GCA000160335_02545;Name=Ferrous iron transporter FeoA-like domain-containing protein;locus_tag=GCA000160335_02545;product=Ferrous iron transporter FeoA-like domain-containing protein;gene=feoA;Parent=GCA000160335_02545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1918,COG:P,RefSeq:WP_000932073.1,SO:0001217,UniParc:UPI00000548C1,UniRef:UniRef100_Q2FV71,UniRef:UniRef50_Q2FV71,UniRef:UniRef90_Q2FV71
contig_1	Pyrodigal	gene	2572111	2574579	.	-	.	ID=GCA000160335_02546_gene;locus_tag=GCA000160335_02546;gene=farE
contig_1	Pyrodigal	CDS	2572111	2574579	.	-	0	ID=GCA000160335_02546;Name=fatty acid efflux MMPL transporter FarE;locus_tag=GCA000160335_02546;product=fatty acid efflux MMPL transporter FarE;gene=farE;Parent=GCA000160335_02546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001051413,COG:COG2409,COG:R,RefSeq:WP_000536426.1,SO:0001217,UniParc:UPI00019CD7E7,UniRef:UniRef100_A0A0E1XLD5,UniRef:UniRef50_A0A2A4GX54,UniRef:UniRef90_A0A122EMC8
contig_1	Pyrodigal	gene	2574745	2575293	.	+	.	ID=GCA000160335_02547_gene;locus_tag=GCA000160335_02547;gene=farR
contig_1	Pyrodigal	CDS	2574745	2575293	.	+	0	ID=GCA000160335_02547;Name=fatty acid efflux pump transcriptional regulator FarR;locus_tag=GCA000160335_02547;product=fatty acid efflux pump transcriptional regulator FarR;gene=farR;Parent=GCA000160335_02547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000665241,COG:COG1309,COG:K,RefSeq:WP_000665237.1,SO:0001217,UniParc:UPI00003B1995,UniRef:UniRef100_A0A7Z7R1G8,UniRef:UniRef50_Q2FV69,UniRef:UniRef90_Q2FV69
contig_1	Pyrodigal	gene	2575649	2577193	.	-	.	ID=GCA000160335_02548_gene;locus_tag=GCA000160335_02548;gene=pruA
contig_1	Pyrodigal	CDS	2575649	2577193	.	-	0	ID=GCA000160335_02548;Name=L-glutamate gamma-semialdehyde dehydrogenase;locus_tag=GCA000160335_02548;product=L-glutamate gamma-semialdehyde dehydrogenase;Dbxref=GO:0003842,GO:0006537,GO:0006562,GO:0009898,GO:0010133;gene=pruA;Parent=GCA000160335_02548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,KEGG:K00294,RefSeq:WP_000259692.1,SO:0001217,UniParc:UPI00000CA9A3,UniRef:UniRef100_Q2FV67,UniRef:UniRef50_P94391,UniRef:UniRef90_Q2FV67;ec_number=1.2.1.88
contig_1	Pyrodigal	gene	2577383	2577982	.	-	.	ID=GCA000160335_02549_gene;locus_tag=GCA000160335_02549;gene=wbbJ
contig_1	Pyrodigal	CDS	2577383	2577982	.	-	0	ID=GCA000160335_02549;Name=Putative acetyltransferase SAS2441;locus_tag=GCA000160335_02549;product=Putative acetyltransferase SAS2441;Dbxref=GO:0008870;gene=wbbJ;Parent=GCA000160335_02549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,KEGG:K00661,RefSeq:WP_000136482.1,SO:0001217,UniParc:UPI00003B1996,UniRef:UniRef100_Q6GDP3,UniRef:UniRef50_Q5HCZ5,UniRef:UniRef90_Q5HCZ5;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2578221	2578412	.	+	.	ID=GCA000160335_02550_gene;locus_tag=GCA000160335_02550;gene=cwrA
contig_1	Pyrodigal	CDS	2578221	2578412	.	+	0	ID=GCA000160335_02550;Name=cell wall inhibition responsive protein CwrA;locus_tag=GCA000160335_02550;product=cell wall inhibition responsive protein CwrA;gene=cwrA;Parent=GCA000160335_02550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221404,RefSeq:WP_001221404.1,SO:0001217,UniParc:UPI00000CAA05,UniRef:UniRef100_Q2FV65,UniRef:UniRef50_A0AAE3D5F7,UniRef:UniRef90_A0AAE3D5F7
contig_1	Pyrodigal	gene	2578652	2581060	.	+	.	ID=GCA000160335_02551_gene;locus_tag=GCA000160335_02551;gene=copZ
contig_1	Pyrodigal	CDS	2578652	2581060	.	+	0	ID=GCA000160335_02551;Name=copper chaperone CopZ;locus_tag=GCA000160335_02551;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0016887,GO:0043682,GO:0046872,GO:0055070,GO:0140581;gene=copZ;Parent=GCA000160335_02551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_000024137.1,SO:0001217,UniParc:UPI000197A9F9,UniRef:UniRef100_A0A7Z7W2P7,UniRef:UniRef50_Q2FV64,UniRef:UniRef90_Q2FV64;ec_number=7.2.2.8
contig_1	Infernal	gene	2581185	2581407	.	+	.	ID=GCA000160335_02552_gene;locus_tag=GCA000160335_02552;gene=S35
contig_1	Infernal	ncRNA	2581185	2581407	9.7e-18	+	.	ID=GCA000160335_02552;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02552;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02552_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2581605	2581811	.	+	.	ID=GCA000160335_02553_gene;locus_tag=GCA000160335_02553;gene=copZ
contig_1	Pyrodigal	CDS	2581605	2581811	.	+	0	ID=GCA000160335_02553;Name=copper chaperone CopZ;locus_tag=GCA000160335_02553;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005737;gene=copZ;Parent=GCA000160335_02553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_000076662.1,SO:0001217,UniParc:UPI00003B1998,UniRef:UniRef100_Q6GDP0,UniRef:UniRef50_Q2FV63,UniRef:UniRef90_Q2FV63
contig_1	Pyrodigal	gene	2581901	2582929	.	-	.	ID=GCA000160335_02554_gene;locus_tag=GCA000160335_02554;gene=ldhA
contig_1	Pyrodigal	CDS	2581901	2582929	.	-	0	ID=GCA000160335_02554;Name=D-lactate dehydrogenase;locus_tag=GCA000160335_02554;product=D-lactate dehydrogenase;gene=ldhA;Parent=GCA000160335_02554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,SO:0001217,UniParc:UPI0001E07170,UniRef:UniRef100_A0A658WNB1,UniRef:UniRef50_A0A658WNB1,UniRef:UniRef90_A0A658WNB1
contig_1	Pyrodigal	gene	2582922	2584076	.	-	.	ID=GCA000160335_02555_gene;locus_tag=GCA000160335_02555;gene=aspB
contig_1	Pyrodigal	CDS	2582922	2584076	.	-	0	ID=GCA000160335_02555;Name=Aminotransferase;locus_tag=GCA000160335_02555;product=Aminotransferase;gene=aspB;Parent=GCA000160335_02555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_000625053.1,SO:0001217,UniParc:UPI00003B199A,UniRef:UniRef100_A0A7Z7W2N3,UniRef:UniRef50_A0A2I7YAX0,UniRef:UniRef90_A0A2I7YAX0
contig_1	Pyrodigal	gene	2584503	2586011	.	-	.	ID=GCA000160335_02556_gene;locus_tag=GCA000160335_02556;gene=crtN
contig_1	Pyrodigal	CDS	2584503	2586011	.	-	0	ID=GCA000160335_02556;Name=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);locus_tag=GCA000160335_02556;product=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);Dbxref=GO:0016117,GO:0102223;gene=crtN;Parent=GCA000160335_02556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,RefSeq:WP_000686175.1,SO:0001217,UniParc:UPI000197AA32,UniRef:UniRef100_A0A0Z4JBW5,UniRef:UniRef50_Q2FV60,UniRef:UniRef90_Q2FV60;ec_number=1.3.8.-
contig_1	Pyrodigal	gene	2586023	2586886	.	-	.	ID=GCA000160335_02557_gene;locus_tag=GCA000160335_02557;gene=crtM
contig_1	Pyrodigal	CDS	2586023	2586886	.	-	0	ID=GCA000160335_02557;Name=4%2C4'-diapophytoene synthase;locus_tag=GCA000160335_02557;product=4%2C4'-diapophytoene synthase;Dbxref=GO:0004311,GO:0016117,GO:0046872,GO:0051996;gene=crtM;Parent=GCA000160335_02557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1562,COG:I,RefSeq:WP_000178319.1,SO:0001217,UniParc:UPI0001614439,UniRef:UniRef100_A9JQL9,UniRef:UniRef50_Q2FV59,UniRef:UniRef90_Q2FV59;ec_number=2.5.1.96
contig_1	Pyrodigal	gene	2586923	2588050	.	-	.	ID=GCA000160335_02558_gene;locus_tag=GCA000160335_02558;gene=crtQ
contig_1	Pyrodigal	CDS	2586923	2588050	.	-	0	ID=GCA000160335_02558;Name=4%2C4'-diaponeurosporenoate glycosyltransferase;locus_tag=GCA000160335_02558;product=4%2C4'-diaponeurosporenoate glycosyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016757;gene=crtQ;Parent=GCA000160335_02558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000871731,COG:COG0463,COG:M,KEGG:K10211,RefSeq:WP_000871725.1,SO:0001217,UniParc:UPI000197AA33,UniRef:UniRef100_A0A2I7YAU2,UniRef:UniRef50_Q2FV58,UniRef:UniRef90_Q2FV58;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2588056	2589549	.	-	.	ID=GCA000160335_02559_gene;locus_tag=GCA000160335_02559;gene=crtP
contig_1	Pyrodigal	CDS	2588056	2589549	.	-	0	ID=GCA000160335_02559;Name=4%2C4'-diaponeurosporene oxygenase;locus_tag=GCA000160335_02559;product=4%2C4'-diaponeurosporene oxygenase;Dbxref=GO:0016117,GO:0016491;gene=crtP;Parent=GCA000160335_02559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,KEGG:K10210,RefSeq:WP_000160442.1,SO:0001217,UniParc:UPI00003B199D,UniRef:UniRef100_Q6GDN5,UniRef:UniRef50_Q4VKU9,UniRef:UniRef90_Q2FV57;ec_number=1.14.99.-
contig_1	Pyrodigal	gene	2589542	2590039	.	-	.	ID=GCA000160335_02560_gene;locus_tag=GCA000160335_02560;gene=crtO
contig_1	Pyrodigal	CDS	2589542	2590039	.	-	0	ID=GCA000160335_02560;Name=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;locus_tag=GCA000160335_02560;product=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016746;gene=crtO;Parent=GCA000160335_02560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000855549,KEGG:K10212,SO:0001217,UniParc:UPI00003B199E,UniRef:UniRef100_Q6GDN4,UniRef:UniRef50_Q53588,UniRef:UniRef90_Q53588;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2590211	2590978	.	-	.	ID=GCA000160335_02561_gene;locus_tag=GCA000160335_02561;gene=ssaA
contig_1	Pyrodigal	CDS	2590211	2590978	.	-	0	ID=GCA000160335_02561;Name=Staphylococcal secretory antigen SsaA;locus_tag=GCA000160335_02561;product=Staphylococcal secretory antigen SsaA;Dbxref=GO:0005576;gene=ssaA;Parent=GCA000160335_02561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000725226.1,SO:0001217,UniParc:UPI00003B199F,UniRef:UniRef100_Q6GDN3,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2FV55
contig_1	Pyrodigal	gene	2591339	2593150	.	-	.	ID=GCA000160335_02562_gene;locus_tag=GCA000160335_02562;gene=oatA
contig_1	Pyrodigal	CDS	2591339	2593150	.	-	0	ID=GCA000160335_02562;Name=O-acetyltransferase OatA;locus_tag=GCA000160335_02562;product=O-acetyltransferase OatA;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oatA;Parent=GCA000160335_02562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_000379838.1,SO:0001217,UniParc:UPI0001B70365,UniRef:UniRef100_UPI0001B70365,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q2FV54;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2593836	2594537	.	-	.	ID=GCA000160335_02563_gene;locus_tag=GCA000160335_02563;gene=isaA
contig_1	Pyrodigal	CDS	2593836	2594537	.	-	0	ID=GCA000160335_02563;Name=lytic transglycosylase IsaA;locus_tag=GCA000160335_02563;product=lytic transglycosylase IsaA;Dbxref=GO:0005576,GO:0016798;gene=isaA;Parent=GCA000160335_02563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000751267,RefSeq:WP_000751265.1,SO:0001217,UniParc:UPI00000B5BB6,UniRef:UniRef100_Q6GDN1,UniRef:UniRef50_Q2FV52,UniRef:UniRef90_Q2FV52;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2595145	2596200	.	-	.	ID=GCA000160335_02564_gene;locus_tag=GCA000160335_02564;gene=pfoR
contig_1	Pyrodigal	CDS	2595145	2596200	.	-	0	ID=GCA000160335_02564;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000160335_02564;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000160335_02564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000200680.1,SO:0001217,UniParc:UPI00003B19A1,UniRef:UniRef100_A0A0E1XB59,UniRef:UniRef50_Q2FV51,UniRef:UniRef90_Q2FV51
contig_1	Pyrodigal	gene	2596593	2597180	.	+	.	ID=GCA000160335_02565_gene;locus_tag=GCA000160335_02565;gene=acrR
contig_1	Pyrodigal	CDS	2596593	2597180	.	+	0	ID=GCA000160335_02565;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000160335_02565;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000160335_02565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,SO:0001217,UniParc:UPI000197AA34,UniRef:UniRef100_A0A0E1XLB5,UniRef:UniRef50_Q2FV48,UniRef:UniRef90_Q2FV48
contig_1	Pyrodigal	gene	2597558	2597878	.	+	.	ID=GCA000160335_02566_gene;locus_tag=GCA000160335_02566
contig_1	Pyrodigal	CDS	2597558	2597878	.	+	0	ID=GCA000160335_02566;Name=hypothetical protein;locus_tag=GCA000160335_02566;product=hypothetical protein;Parent=GCA000160335_02566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD7B0,UniRef:UniRef100_A0A7Z7R1P8,UniRef:UniRef50_A0A0H3K4R4,UniRef:UniRef90_A0A0U1MU54
contig_1	Pyrodigal	gene	2598098	2598328	.	+	.	ID=GCA000160335_02567_gene;locus_tag=GCA000160335_02567;gene=ynzC
contig_1	Pyrodigal	CDS	2598098	2598328	.	+	0	ID=GCA000160335_02567;Name=UPF0291 protein SAR2654;locus_tag=GCA000160335_02567;product=UPF0291 protein SAR2654;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000160335_02567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000697134.1,SO:0001217,UniParc:UPI00000548DD,UniRef:UniRef100_P60077,UniRef:UniRef50_P60077,UniRef:UniRef90_P60077
contig_1	Pyrodigal	gene	2598491	2598868	.	-	.	ID=GCA000160335_02568_gene;locus_tag=GCA000160335_02568
contig_1	Pyrodigal	CDS	2598491	2598868	.	-	0	ID=GCA000160335_02568;Name=VOC domain-containing protein;locus_tag=GCA000160335_02568;product=VOC domain-containing protein;Parent=GCA000160335_02568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000616227.1,SO:0001217,UniParc:UPI00000DA015,UniRef:UniRef100_Q2FV45,UniRef:UniRef50_Q2FV45,UniRef:UniRef90_Q2FV45
contig_1	Pyrodigal	gene	2598885	2599706	.	-	.	ID=GCA000160335_02569_gene;locus_tag=GCA000160335_02569;gene=ybjT
contig_1	Pyrodigal	CDS	2598885	2599706	.	-	0	ID=GCA000160335_02569;Name=NAD dependent epimerase/dehydratase family protein;locus_tag=GCA000160335_02569;product=NAD dependent epimerase/dehydratase family protein;gene=ybjT;Parent=GCA000160335_02569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_000651846.1,SO:0001217,UniParc:UPI0001B70099,UniRef:UniRef100_A0A123C0R0,UniRef:UniRef50_A0A380FXE5,UniRef:UniRef90_A0A2S6D292
contig_1	Pyrodigal	gene	2599725	2600024	.	-	.	ID=GCA000160335_02570_gene;locus_tag=GCA000160335_02570
contig_1	Pyrodigal	CDS	2599725	2600024	.	-	0	ID=GCA000160335_02570;Name=DUF2316 domain-containing protein;locus_tag=GCA000160335_02570;product=DUF2316 domain-containing protein;Parent=GCA000160335_02570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4367,COG:S,RefSeq:WP_000055857.1,SO:0001217,UniParc:UPI00003B19A5,UniRef:UniRef100_A0A113VV55,UniRef:UniRef50_Q2FV43,UniRef:UniRef90_Q2FV43
contig_1	Pyrodigal	gene	2600155	2600712	.	+	.	ID=GCA000160335_02571_gene;locus_tag=GCA000160335_02571;gene=acrR
contig_1	Pyrodigal	CDS	2600155	2600712	.	+	0	ID=GCA000160335_02571;Name=HTH-type transcriptional regulator SACOL2593;locus_tag=GCA000160335_02571;product=HTH-type transcriptional regulator SACOL2593;Dbxref=GO:0003677;gene=acrR;Parent=GCA000160335_02571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_001224184.1,SO:0001217,UniParc:UPI00003B19A6,UniRef:UniRef100_Q6GDM3,UniRef:UniRef50_Q2FV42,UniRef:UniRef90_Q2FV42
contig_1	Pyrodigal	gene	2600705	2601409	.	+	.	ID=GCA000160335_02572_gene;locus_tag=GCA000160335_02572;gene=fabG
contig_1	Pyrodigal	CDS	2600705	2601409	.	+	0	ID=GCA000160335_02572;Name=KR domain-containing protein;locus_tag=GCA000160335_02572;product=KR domain-containing protein;gene=fabG;Parent=GCA000160335_02572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000161837.1,SO:0001217,UniParc:UPI00003B19A7,UniRef:UniRef100_A0A7Z7R0Y3,UniRef:UniRef50_A0A2K4AHE4,UniRef:UniRef90_A0A2K4AHE4
contig_1	Pyrodigal	gene	2601506	2602516	.	+	.	ID=GCA000160335_02573_gene;locus_tag=GCA000160335_02573;gene=ligW
contig_1	Pyrodigal	CDS	2601506	2602516	.	+	0	ID=GCA000160335_02573;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000160335_02573;product=Amidohydrolase-related domain-containing protein;gene=ligW;Parent=GCA000160335_02573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2159,COG:G,RefSeq:WP_000836424.1,SO:0001217,UniParc:UPI00003B19A8,UniRef:UniRef100_A0A0E1XCP4,UniRef:UniRef50_Q2FV40,UniRef:UniRef90_Q2FV40
contig_1	Pyrodigal	gene	2602536	2603366	.	+	.	ID=GCA000160335_02574_gene;locus_tag=GCA000160335_02574;gene=menH
contig_1	Pyrodigal	CDS	2602536	2603366	.	+	0	ID=GCA000160335_02574;Name=putative hydrolase SA2367;locus_tag=GCA000160335_02574;product=putative hydrolase SA2367;Dbxref=GO:0016020,GO:0016787;gene=menH;Parent=GCA000160335_02574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000448898.1,SO:0001217,UniParc:UPI00003B19A9,UniRef:UniRef100_Q6GDM0,UniRef:UniRef50_Q2FDS6,UniRef:UniRef90_Q2FDS6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2603513	2604403	.	-	.	ID=GCA000160335_02575_gene;locus_tag=GCA000160335_02575;gene=yejR
contig_1	Pyrodigal	CDS	2603513	2604403	.	-	0	ID=GCA000160335_02575;Name=GTP-binding protein;locus_tag=GCA000160335_02575;product=GTP-binding protein;gene=yejR;Parent=GCA000160335_02575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000706528.1,SO:0001217,UniParc:UPI00003B19AA,UniRef:UniRef100_A0A7Z7R0T4,UniRef:UniRef50_L7STG1,UniRef:UniRef90_Q2FV38
contig_1	Pyrodigal	gene	2604503	2605849	.	-	.	ID=GCA000160335_02576_gene;locus_tag=GCA000160335_02576
contig_1	Pyrodigal	CDS	2604503	2605849	.	-	0	ID=GCA000160335_02576;Name=Ferrous iron transport protein B;locus_tag=GCA000160335_02576;product=Ferrous iron transport protein B;Parent=GCA000160335_02576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B19AB,UniRef:UniRef100_A0A0Z4A0J4,UniRef:UniRef50_B9DL78,UniRef:UniRef90_A0A0Z4A0J4
contig_1	Pyrodigal	gene	2605837	2606943	.	-	.	ID=GCA000160335_02577_gene;locus_tag=GCA000160335_02577;gene=trxB
contig_1	Pyrodigal	CDS	2605837	2606943	.	-	0	ID=GCA000160335_02577;Name=Putative flavoprotein monooxygenase;locus_tag=GCA000160335_02577;product=Putative flavoprotein monooxygenase;Dbxref=GO:0004497,GO:0050660;gene=trxB;Parent=GCA000160335_02577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,RefSeq:WP_001163755.1,SO:0001217,UniParc:UPI00003B19AC,UniRef:UniRef100_A0A7Z7R0Z1,UniRef:UniRef50_Q99R54,UniRef:UniRef90_Q99R54;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2607276	2607572	.	-	.	ID=GCA000160335_02578_gene;locus_tag=GCA000160335_02578
contig_1	Pyrodigal	CDS	2607276	2607572	.	-	0	ID=GCA000160335_02578;Name=DUF4176 domain-containing protein;locus_tag=GCA000160335_02578;product=DUF4176 domain-containing protein;Parent=GCA000160335_02578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4495,COG:S,RefSeq:WP_000447706.1,SO:0001217,UniParc:UPI00003B19AD,UniRef:UniRef100_A0A7Z7R1V1,UniRef:UniRef50_Q2FV34,UniRef:UniRef90_Q2FV34
contig_1	Pyrodigal	gene	2607560	2607898	.	-	.	ID=GCA000160335_02579_gene;locus_tag=GCA000160335_02579
contig_1	Pyrodigal	CDS	2607560	2607898	.	-	0	ID=GCA000160335_02579;Name=hypothetical protein;locus_tag=GCA000160335_02579;product=hypothetical protein;Parent=GCA000160335_02579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E07190,UniRef:UniRef100_A0A2X2JTW5,UniRef:UniRef50_A0A6A9GUL6,UniRef:UniRef90_A0A6A9GUL6
contig_1	Pyrodigal	gene	2607943	2608221	.	-	.	ID=GCA000160335_02580_gene;locus_tag=GCA000160335_02580
contig_1	Pyrodigal	CDS	2607943	2608221	.	-	0	ID=GCA000160335_02580;Name=TIGR04197 family type VII secretion effector;locus_tag=GCA000160335_02580;product=TIGR04197 family type VII secretion effector;Parent=GCA000160335_02580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000987947.1,SO:0001217,UniParc:UPI00003B19AF,UniRef:UniRef100_A0A7Z7W2Q5,UniRef:UniRef50_Q2FV32,UniRef:UniRef90_Q2FV32
contig_1	Pyrodigal	gene	2608558	2609424	.	-	.	ID=GCA000160335_02581_gene;locus_tag=GCA000160335_02581;gene=fN3K
contig_1	Pyrodigal	CDS	2608558	2609424	.	-	0	ID=GCA000160335_02581;Name=putative ketoamine kinase SAOUHSC_02908;locus_tag=GCA000160335_02581;product=putative ketoamine kinase SAOUHSC_02908;Dbxref=GO:0005524,GO:0016301,GO:0016773,GO:0102193;gene=fN3K;Parent=GCA000160335_02581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3001,COG:G,RefSeq:WP_001005516.1,SO:0001217,UniParc:UPI00003B19B0,UniRef:UniRef100_A0A0E1XD94,UniRef:UniRef50_Q2FV31,UniRef:UniRef90_Q2FV31;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2609642	2610706	.	+	.	ID=GCA000160335_02582_gene;locus_tag=GCA000160335_02582;gene=pyrD
contig_1	Pyrodigal	CDS	2609642	2610706	.	+	0	ID=GCA000160335_02582;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000160335_02582;product=quinone-dependent dihydroorotate dehydrogenase;gene=pyrD;Parent=GCA000160335_02582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_000277421.1,SO:0001217,UniParc:UPI00003B19B1,UniRef:UniRef100_A0A7Z7W329,UniRef:UniRef50_Q2FV30,UniRef:UniRef90_Q2FV30;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	2610861	2611136	.	+	.	ID=GCA000160335_02583_gene;locus_tag=GCA000160335_02583
contig_1	Pyrodigal	CDS	2610861	2611136	.	+	0	ID=GCA000160335_02583;Name=Membrane protein;locus_tag=GCA000160335_02583;product=Membrane protein;Parent=GCA000160335_02583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159835.1,SO:0001217,UniParc:UPI00003B19B2,UniRef:UniRef100_A0A7Z7W2P3,UniRef:UniRef50_A0A654C2I8,UniRef:UniRef90_Q2FV29
contig_1	Pyrodigal	gene	2611322	2612044	.	-	.	ID=GCA000160335_02584_gene;locus_tag=GCA000160335_02584;gene=queH
contig_1	Pyrodigal	CDS	2611322	2612044	.	-	0	ID=GCA000160335_02584;Name=Epoxyqueuosine reductase QueH;locus_tag=GCA000160335_02584;product=Epoxyqueuosine reductase QueH;Dbxref=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queH;Parent=GCA000160335_02584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1636,COG:J,KEGG:K09765,RefSeq:WP_000606210.1,SO:0001217,UniParc:UPI00000548F1,UniRef:UniRef100_A0A0H3JUG6,UniRef:UniRef50_Q9A1K3,UniRef:UniRef90_A0A0H3JUG6;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	2612400	2612849	.	+	.	ID=GCA000160335_02585_gene;locus_tag=GCA000160335_02585;gene=phnB
contig_1	Pyrodigal	CDS	2612400	2612849	.	+	0	ID=GCA000160335_02585;Name=PhnB-like domain-containing protein;locus_tag=GCA000160335_02585;product=PhnB-like domain-containing protein;gene=phnB;Parent=GCA000160335_02585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2764,RefSeq:WP_000125701.1,SO:0001217,UniParc:UPI00003B19B3,UniRef:UniRef100_A0A7Z7R0Z7,UniRef:UniRef50_Q2FV27,UniRef:UniRef90_Q2FV27
contig_1	Pyrodigal	gene	2612930	2613517	.	-	.	ID=GCA000160335_02586_gene;locus_tag=GCA000160335_02586;gene=acrR
contig_1	Pyrodigal	CDS	2612930	2613517	.	-	0	ID=GCA000160335_02586;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000160335_02586;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000160335_02586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000151114.1,SO:0001217,UniParc:UPI00003B19B4,UniRef:UniRef100_A0A2X2JZV3,UniRef:UniRef50_Q2FV26,UniRef:UniRef90_Q2FV26
contig_1	Pyrodigal	gene	2613660	2615342	.	+	.	ID=GCA000160335_02587_gene;locus_tag=GCA000160335_02587
contig_1	Pyrodigal	CDS	2613660	2615342	.	+	0	ID=GCA000160335_02587;Name=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;locus_tag=GCA000160335_02587;product=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;Parent=GCA000160335_02587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2936,COG:R,KEGG:K06978,RefSeq:WP_001071588.1,SO:0001217,UniParc:UPI0001B700B9,UniRef:UniRef100_A0A113Y2G9,UniRef:UniRef50_A0A380G5J2,UniRef:UniRef90_Q2FV24
contig_1	Pyrodigal	gene	2615471	2615854	.	-	.	ID=GCA000160335_02588_gene;locus_tag=GCA000160335_02588;gene=panD
contig_1	Pyrodigal	CDS	2615471	2615854	.	-	0	ID=GCA000160335_02588;Name=aspartate 1-decarboxylase;locus_tag=GCA000160335_02588;product=aspartate 1-decarboxylase;Dbxref=GO:0004068,GO:0005829,GO:0006523,GO:0015940;gene=panD;Parent=GCA000160335_02588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0853,COG:H,KEGG:K01579,RefSeq:WP_000621532.1,SO:0001217,UniParc:UPI00001312C4,UniRef:UniRef100_Q2FV23,UniRef:UniRef50_Q2FV23,UniRef:UniRef90_Q2FV23;ec_number=4.1.1.11
contig_1	Pyrodigal	gene	2615856	2616707	.	-	.	ID=GCA000160335_02589_gene;locus_tag=GCA000160335_02589;gene=panC
contig_1	Pyrodigal	CDS	2615856	2616707	.	-	0	ID=GCA000160335_02589;Name=pantoate--beta-alanine ligase;locus_tag=GCA000160335_02589;product=pantoate--beta-alanine ligase;Dbxref=GO:0004592,GO:0005524,GO:0005829,GO:0015940;gene=panC;Parent=GCA000160335_02589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0414,COG:H,KEGG:K01918,RefSeq:WP_000163741.1,SO:0001217,UniParc:UPI00003B19B6,UniRef:UniRef100_Q6GDK5,UniRef:UniRef50_Q2FV22,UniRef:UniRef90_Q2FV22;ec_number=6.3.2.1
contig_1	Pyrodigal	gene	2616700	2617518	.	-	.	ID=GCA000160335_02590_gene;locus_tag=GCA000160335_02590;gene=panB
contig_1	Pyrodigal	CDS	2616700	2617518	.	-	0	ID=GCA000160335_02590;Name=3-methyl-2-oxobutanoate hydroxymethyltransferase;locus_tag=GCA000160335_02590;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;Dbxref=GO:0000287,GO:0003864,GO:0005737,GO:0015940;gene=panB;Parent=GCA000160335_02590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0413,COG:H,KEGG:K00606,RefSeq:WP_000860045.1,SO:0001217,UniParc:UPI00003B19B7,UniRef:UniRef100_Q6GDK4,UniRef:UniRef50_Q2FV21,UniRef:UniRef90_Q2FV21;ec_number=2.1.2.11
contig_1	Pyrodigal	gene	2617591	2618451	.	+	.	ID=GCA000160335_02591_gene;locus_tag=GCA000160335_02591;gene=panE
contig_1	Pyrodigal	CDS	2617591	2618451	.	+	0	ID=GCA000160335_02591;Name=oxidoreductase;locus_tag=GCA000160335_02591;product=oxidoreductase;gene=panE;Parent=GCA000160335_02591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000953580.1,SO:0001217,UniParc:UPI00003B19B8,UniRef:UniRef100_A0A7Z7R1J8,UniRef:UniRef50_A0A0J9X283,UniRef:UniRef90_A0A0J9X283
contig_1	Pyrodigal	gene	2618537	2619241	.	-	.	ID=GCA000160335_02592_gene;locus_tag=GCA000160335_02592;gene=budA
contig_1	Pyrodigal	CDS	2618537	2619241	.	-	0	ID=GCA000160335_02592;Name=acetolactate decarboxylase;locus_tag=GCA000160335_02592;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000160335_02592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,KEGG:K01575,RefSeq:WP_000186117.1,SO:0001217,UniParc:UPI00000548FA,UniRef:UniRef100_Q2FV19,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MVR1;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2619519	2620478	.	-	.	ID=GCA000160335_02593_gene;locus_tag=GCA000160335_02593;gene=ldh2
contig_1	Pyrodigal	CDS	2619519	2620478	.	-	0	ID=GCA000160335_02593;Name=L-lactate dehydrogenase;locus_tag=GCA000160335_02593;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh2;Parent=GCA000160335_02593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,KEGG:K00016,RefSeq:WP_000846637.1,SO:0001217,UniParc:UPI00000548FB,UniRef:UniRef100_Q2G1Y5,UniRef:UniRef50_P00344,UniRef:UniRef90_Q2G1Y5;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	2621164	2622612	.	+	.	ID=GCA000160335_02594_gene;locus_tag=GCA000160335_02594;gene=potE
contig_1	Pyrodigal	CDS	2621164	2622612	.	+	0	ID=GCA000160335_02594;Name=Amino acid permease;locus_tag=GCA000160335_02594;product=Amino acid permease;gene=potE;Parent=GCA000160335_02594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000534419.1,SO:0001217,UniParc:UPI00003B19B9,UniRef:UniRef100_A0A7Z7R1R1,UniRef:UniRef50_A2RHI9,UniRef:UniRef90_Q2G1Y2
contig_1	Pyrodigal	gene	2622692	2624029	.	-	.	ID=GCA000160335_02595_gene;locus_tag=GCA000160335_02595;gene=argD
contig_1	Pyrodigal	CDS	2622692	2624029	.	-	0	ID=GCA000160335_02595;Name=aspartate aminotransferase family protein;locus_tag=GCA000160335_02595;product=aspartate aminotransferase family protein;Dbxref=GO:0008483;gene=argD;Parent=GCA000160335_02595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0160,COG:E,RefSeq:WP_000030061.1,SO:0001217,UniParc:UPI000197AA64,UniRef:UniRef100_A0A7U7EWE4,UniRef:UniRef50_Q2G1Y4,UniRef:UniRef90_Q2G1Y4
contig_1	Pyrodigal	gene	2624283	2624699	.	+	.	ID=GCA000160335_02596_gene;locus_tag=GCA000160335_02596
contig_1	Pyrodigal	CDS	2624283	2624699	.	+	0	ID=GCA000160335_02596;Name=hypothetical protein;locus_tag=GCA000160335_02596;product=hypothetical protein;Parent=GCA000160335_02596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001237625.1,SO:0001217,UniParc:UPI00003B19BB,UniRef:UniRef100_A0A7Z7W2V1,UniRef:UniRef50_Q2FV18,UniRef:UniRef90_Q2FV18
contig_1	Pyrodigal	gene	2624822	2625712	.	+	.	ID=GCA000160335_02597_gene;locus_tag=GCA000160335_02597;gene=fda
contig_1	Pyrodigal	CDS	2624822	2625712	.	+	0	ID=GCA000160335_02597;Name=fructose bisphosphate aldolase;locus_tag=GCA000160335_02597;product=fructose bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096;gene=fda;Parent=GCA000160335_02597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01623,RefSeq:WP_001031407.1,SO:0001217,UniParc:UPI00003B19BC,UniRef:UniRef100_Q6GDJ7,UniRef:UniRef50_Q8CMY5,UniRef:UniRef90_Q6GDJ7;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2625905	2627401	.	-	.	ID=GCA000160335_02598_gene;locus_tag=GCA000160335_02598;gene=lqo
contig_1	Pyrodigal	CDS	2625905	2627401	.	-	0	ID=GCA000160335_02598;Name=L-lactate dehydrogenase (quinone);locus_tag=GCA000160335_02598;product=L-lactate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=lqo;Parent=GCA000160335_02598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,KEGG:K00116,RefSeq:WP_001130051.1,SO:0001217,UniParc:UPI000012F4C1,UniRef:UniRef100_Q5HCU5,UniRef:UniRef50_O69282,UniRef:UniRef90_Q5HCU5;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2628088	2629707	.	-	.	ID=GCA000160335_02599_gene;locus_tag=GCA000160335_02599;gene=mbcS
contig_1	Pyrodigal	CDS	2628088	2629707	.	-	0	ID=GCA000160335_02599;Name=acyl-CoA synthetase MbcS;locus_tag=GCA000160335_02599;product=acyl-CoA synthetase MbcS;gene=mbcS;Parent=GCA000160335_02599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0365,COG:I,SO:0001217,UniParc:UPI0000054904,UniRef:UniRef100_A0A380EMG2,UniRef:UniRef50_C0SPB0,UniRef:UniRef90_A0A2K4AH92
contig_1	Pyrodigal	gene	2629880	2630323	.	-	.	ID=GCA000160335_02600_gene;locus_tag=GCA000160335_02600
contig_1	Pyrodigal	CDS	2629880	2630323	.	-	0	ID=GCA000160335_02600;Name=Signal transduction protein TRAP;locus_tag=GCA000160335_02600;product=Signal transduction protein TRAP;Parent=GCA000160335_02600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001028789.1,SO:0001217,UniParc:UPI00003B19BF,UniRef:UniRef100_A0A0E1XAW7,UniRef:UniRef50_A0A2T4SS92,UniRef:UniRef90_A0A0U1MTU5
contig_1	Pyrodigal	gene	2630603	2630815	.	-	.	ID=GCA000160335_02601_gene;locus_tag=GCA000160335_02601;gene=yozE
contig_1	Pyrodigal	CDS	2630603	2630815	.	-	0	ID=GCA000160335_02601;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000160335_02601;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000160335_02601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011688.1,SO:0001217,UniParc:UPI0000054906,UniRef:UniRef100_Q2FV12,UniRef:UniRef50_Q2FV12,UniRef:UniRef90_Q2FV12
contig_1	Pyrodigal	gene	2631093	2632802	.	-	.	ID=GCA000160335_02602_gene;locus_tag=GCA000160335_02602;gene=betA
contig_1	Pyrodigal	CDS	2631093	2632802	.	-	0	ID=GCA000160335_02602;Name=choline dehydrogenase;locus_tag=GCA000160335_02602;product=choline dehydrogenase;Dbxref=GO:0008802,GO:0008812,GO:0016020,GO:0019285,GO:0050660;gene=betA;Parent=GCA000160335_02602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2303,COG:IR,KEGG:K00108,RefSeq:WP_000066521.1,SO:0001217,UniParc:UPI00000CAC6B,UniRef:UniRef100_Q2FV11,UniRef:UniRef50_Q9X2M2,UniRef:UniRef90_Q8NUM0;ec_number=1.1.99.1
contig_1	Pyrodigal	gene	2633063	2634553	.	-	.	ID=GCA000160335_02603_gene;locus_tag=GCA000160335_02603;gene=betB
contig_1	Pyrodigal	CDS	2633063	2634553	.	-	0	ID=GCA000160335_02603;Name=betaine-aldehyde dehydrogenase;locus_tag=GCA000160335_02603;product=betaine-aldehyde dehydrogenase;Dbxref=GO:0008802,GO:0019285,GO:0046872;gene=betB;Parent=GCA000160335_02603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000421699.1,SO:0001217,UniParc:UPI00003B19C0,UniRef:UniRef100_A0A114JEL6,UniRef:UniRef50_P71016,UniRef:UniRef90_A0A114JEL6;ec_number=1.2.1.8
contig_1	Pyrodigal	gene	2634806	2635369	.	+	.	ID=GCA000160335_02604_gene;locus_tag=GCA000160335_02604;gene=cudC
contig_1	Pyrodigal	CDS	2634806	2635369	.	+	0	ID=GCA000160335_02604;Name=choline uptake/conversion transcriptional regulator CudC;locus_tag=GCA000160335_02604;product=choline uptake/conversion transcriptional regulator CudC;gene=cudC;Parent=GCA000160335_02604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1510,COG:K,RefSeq:WP_000198597.1,SO:0001217,UniParc:UPI000197AA65,UniRef:UniRef100_A0A0E1XAW3,UniRef:UniRef50_A0A653VN80,UniRef:UniRef90_A0A7U7PWT0
contig_1	Pyrodigal	gene	2635539	2637161	.	-	.	ID=GCA000160335_02605_gene;locus_tag=GCA000160335_02605;gene=betT
contig_1	Pyrodigal	CDS	2635539	2637161	.	-	0	ID=GCA000160335_02605;Name=BCCT family transporter;locus_tag=GCA000160335_02605;product=BCCT family transporter;gene=betT;Parent=GCA000160335_02605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000711870.1,SO:0001217,UniParc:UPI00000D7878,UniRef:UniRef100_Q2FV06,UniRef:UniRef50_B9DJU7,UniRef:UniRef90_A0A2K4AH89
contig_1	Pyrodigal	gene	2637679	2638215	.	-	.	ID=GCA000160335_02606_gene;locus_tag=GCA000160335_02606;gene=nrdG
contig_1	Pyrodigal	CDS	2637679	2638215	.	-	0	ID=GCA000160335_02606;Name=anaerobic ribonucleoside-triphosphate reductase activating protein;locus_tag=GCA000160335_02606;product=anaerobic ribonucleoside-triphosphate reductase activating protein;Dbxref=GO:0043365,GO:0051539;gene=nrdG;Parent=GCA000160335_02606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,RefSeq:WP_000173336.1,SO:0001217,UniParc:UPI00000B8FF6,UniRef:UniRef100_A0A7Z7R1W7,UniRef:UniRef50_Q5HL05,UniRef:UniRef90_W8TQE8
contig_1	Pyrodigal	gene	2638212	2640062	.	-	.	ID=GCA000160335_02607_gene;locus_tag=GCA000160335_02607;gene=nrdD
contig_1	Pyrodigal	CDS	2638212	2640062	.	-	0	ID=GCA000160335_02607;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA000160335_02607;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0006260,GO:0008998;gene=nrdD;Parent=GCA000160335_02607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,KEGG:K21636,RefSeq:WP_001071721.1,SO:0001217,UniParc:UPI00003B19C2,UniRef:UniRef100_A0A7Z7R1S1,UniRef:UniRef50_A0A3M8TCM7,UniRef:UniRef90_A0A6B1RSJ5;ec_number=1.17.4.2
contig_1	Pyrodigal	gene	2640309	2641679	.	-	.	ID=GCA000160335_02608_gene;locus_tag=GCA000160335_02608;gene=citM
contig_1	Pyrodigal	CDS	2640309	2641679	.	-	0	ID=GCA000160335_02608;Name=Citrate transporter;locus_tag=GCA000160335_02608;product=Citrate transporter;gene=citM;Parent=GCA000160335_02608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2851,RefSeq:WP_001083492.1,SO:0001217,UniParc:UPI00003B19C3,UniRef:UniRef100_A0A0E1XAV8,UniRef:UniRef50_U7MQB7,UniRef:UniRef90_A0A2K4AHA3
contig_1	Pyrodigal	gene	2642168	2642776	.	-	.	ID=GCA000160335_02609_gene;locus_tag=GCA000160335_02609;gene=cysG2
contig_1	Pyrodigal	CDS	2642168	2642776	.	-	0	ID=GCA000160335_02609;Name=NAD(P)-binding protein;locus_tag=GCA000160335_02609;product=NAD(P)-binding protein;gene=cysG2;Parent=GCA000160335_02609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1648,COG:H,RefSeq:WP_000062534.1,SO:0001217,UniParc:UPI00003B19C4,UniRef:UniRef100_A0A7Z7W2V6,UniRef:UniRef50_A0A380FX36,UniRef:UniRef90_A0A2S6D249
contig_1	Pyrodigal	gene	2642842	2644722	.	-	.	ID=GCA000160335_02610_gene;locus_tag=GCA000160335_02610;gene=cysJ
contig_1	Pyrodigal	CDS	2642842	2644722	.	-	0	ID=GCA000160335_02610;Name=assimilatory sulfite reductase (NADPH) flavoprotein subunit;locus_tag=GCA000160335_02610;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;Dbxref=GO:0004783,GO:0006790,GO:0009337,GO:0010181,GO:0019344,GO:0050660;gene=cysJ;Parent=GCA000160335_02610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0369,COG:FP,RefSeq:WP_000775162.1,SO:0001217,UniParc:UPI00019CD71B,UniRef:UniRef100_A0A0E1XB12,UniRef:UniRef50_A0A380BWQ0,UniRef:UniRef90_Q2FUZ8;ec_number=1.8.1.2
contig_1	Pyrodigal	gene	2645113	2645610	.	-	.	ID=GCA000160335_02611_gene;locus_tag=GCA000160335_02611;gene=btuE
contig_1	Pyrodigal	CDS	2645113	2645610	.	-	0	ID=GCA000160335_02611;Name=Glutathione peroxidase;locus_tag=GCA000160335_02611;product=Glutathione peroxidase;gene=btuE;Parent=GCA000160335_02611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_001065267.1,SO:0001217,UniParc:UPI00003B19C6,UniRef:UniRef100_A0A380DYP6,UniRef:UniRef50_Q5HKZ3,UniRef:UniRef90_A0A7U7JRL2;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	2645620	2645871	.	-	.	ID=GCA000160335_02612_gene;locus_tag=GCA000160335_02612
contig_1	Pyrodigal	CDS	2645620	2645871	.	-	0	ID=GCA000160335_02612;Name=Transposase;locus_tag=GCA000160335_02612;product=Transposase;Parent=GCA000160335_02612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001E0BF6A,UniRef:UniRef100_A0A0E1XD68,UniRef:UniRef50_A0A0E1XD68,UniRef:UniRef90_A0A0E1XD68
contig_1	Pyrodigal	gene	2647051	2649051	.	-	.	ID=GCA000160335_02613_gene;locus_tag=GCA000160335_02613
contig_1	Pyrodigal	CDS	2647051	2649051	.	-	0	ID=GCA000160335_02613;Name=Similar to ABC transporter (ATP-binding protein);locus_tag=GCA000160335_02613;product=Similar to ABC transporter (ATP-binding protein);Parent=GCA000160335_02613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19084,RefSeq:WP_000776744.1,SO:0001217,UniParc:UPI00003B19C7,UniRef:UniRef100_A0A7Z7R117,UniRef:UniRef50_A0A7U7F0H2,UniRef:UniRef90_A0A7U7F0H2
contig_1	Pyrodigal	gene	2649048	2649803	.	-	.	ID=GCA000160335_02614_gene;locus_tag=GCA000160335_02614;gene=lolD
contig_1	Pyrodigal	CDS	2649048	2649803	.	-	0	ID=GCA000160335_02614;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_02614;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000160335_02614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000923764.1,SO:0001217,UniParc:UPI00003B19C8,UniRef:UniRef100_H3K0N4,UniRef:UniRef50_A0A2S6D259,UniRef:UniRef90_A0A2S6D259
contig_1	Pyrodigal	gene	2649911	2650798	.	-	.	ID=GCA000160335_02615_gene;locus_tag=GCA000160335_02615;gene=nsaS
contig_1	Pyrodigal	CDS	2649911	2650798	.	-	0	ID=GCA000160335_02615;Name=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;locus_tag=GCA000160335_02615;product=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;gene=nsaS;Parent=GCA000160335_02615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143419,COG:COG0642,COG:T,KEGG:K19081,RefSeq:WP_000143418.1,SO:0001217,UniParc:UPI00003B19C9,UniRef:UniRef100_A0A0E1XL61,UniRef:UniRef50_A0A389PV50,UniRef:UniRef90_A0A389PV50;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2650809	2651474	.	-	.	ID=GCA000160335_02616_gene;locus_tag=GCA000160335_02616;gene=nsaR
contig_1	Pyrodigal	CDS	2650809	2651474	.	-	0	ID=GCA000160335_02616;Name=nisin susceptibility-associated two-component system response regulator NsaR;locus_tag=GCA000160335_02616;product=nisin susceptibility-associated two-component system response regulator NsaR;gene=nsaR;Parent=GCA000160335_02616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000697886,COG:COG0745,COG:TK,RefSeq:WP_000697879.1,SO:0001217,UniParc:UPI00003B19CA,UniRef:UniRef100_A0A7Z7R0U7,UniRef:UniRef50_A0A371ILZ4,UniRef:UniRef90_A0A5F0HLH2
contig_1	Pyrodigal	gene	2651500	2651700	.	-	.	ID=GCA000160335_02617_gene;locus_tag=GCA000160335_02617
contig_1	Pyrodigal	CDS	2651500	2651700	.	-	0	ID=GCA000160335_02617;Name=Membrane protein;locus_tag=GCA000160335_02617;product=Membrane protein;Parent=GCA000160335_02617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000604727.1,SO:0001217,UniParc:UPI00000DA033,UniRef:UniRef100_A0A7Z7R0W5,UniRef:UniRef50_Q2FUY8,UniRef:UniRef90_Q2FUY8
contig_1	Pyrodigal	gene	2651898	2653322	.	+	.	ID=GCA000160335_02618_gene;locus_tag=GCA000160335_02618;gene=phoA
contig_1	Pyrodigal	CDS	2651898	2653322	.	+	0	ID=GCA000160335_02618;Name=Alkaline phosphatase 3;locus_tag=GCA000160335_02618;product=Alkaline phosphatase 3;gene=phoA;Parent=GCA000160335_02618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1785,COG:PR,KEGG:K01077,RefSeq:WP_000953739.1,SO:0001217,UniParc:UPI000197AA94,UniRef:UniRef100_A0A0Z0QTC6,UniRef:UniRef50_A0A0U1MVV2,UniRef:UniRef90_A0A0U1MVV2;ec_number=3.1.3.1
contig_1	Infernal	gene	2652681	2652784	.	-	.	ID=GCA000160335_02619_gene;locus_tag=GCA000160335_02619;gene=sau-13
contig_1	Infernal	ncRNA	2652681	2652784	2.5e-18	-	.	ID=GCA000160335_02619;Name=Staphylococcus sRNA sau-13;locus_tag=GCA000160335_02619;product=Staphylococcus sRNA sau-13;Dbxref=RFAM:RF02385;Parent=GCA000160335_02619_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02385
contig_1	Pyrodigal	gene	2653382	2653486	.	-	.	ID=GCA000160335_02620_gene;locus_tag=GCA000160335_02620
contig_1	Pyrodigal	CDS	2653382	2653486	.	-	0	ID=GCA000160335_02620;Name=SE2200 family small protein;locus_tag=GCA000160335_02620;product=SE2200 family small protein;Parent=GCA000160335_02620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054923,UniRef:UniRef100_Q8NUL1,UniRef:UniRef50_P60876,UniRef:UniRef90_P60876
contig_1	Pyrodigal	gene	2653605	2654060	.	-	.	ID=GCA000160335_02621_gene;locus_tag=GCA000160335_02621;gene=marR
contig_1	Pyrodigal	CDS	2653605	2654060	.	-	0	ID=GCA000160335_02621;Name=HTH marR-type domain-containing protein;locus_tag=GCA000160335_02621;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000160335_02621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000106185.1,SO:0001217,UniParc:UPI0000054925,UniRef:UniRef100_Q2FUY4,UniRef:UniRef50_Q2FUY4,UniRef:UniRef90_Q2FUY4
contig_1	Pyrodigal	gene	2654305	2655066	.	-	.	ID=GCA000160335_02622_gene;locus_tag=GCA000160335_02622;gene=frmB
contig_1	Pyrodigal	CDS	2654305	2655066	.	-	0	ID=GCA000160335_02622;Name=S-formylglutathione hydrolase;locus_tag=GCA000160335_02622;product=S-formylglutathione hydrolase;gene=frmB;Parent=GCA000160335_02622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0627,COG:V,RefSeq:WP_000323448.1,SO:0001217,UniParc:UPI00003B19CB,UniRef:UniRef100_A0A7Z7R1X6,UniRef:UniRef50_Q2FUY3,UniRef:UniRef90_Q2FUY3
contig_1	Pyrodigal	gene	2655182	2657965	.	-	.	ID=GCA000160335_02623_gene;locus_tag=GCA000160335_02623;gene=clfB
contig_1	Pyrodigal	CDS	2655182	2657965	.	-	0	ID=GCA000160335_02623;Name=MSCRAMM family adhesin clumping factor ClfB;locus_tag=GCA000160335_02623;product=MSCRAMM family adhesin clumping factor ClfB;Dbxref=GO:0005576,GO:0007155;gene=clfB;Parent=GCA000160335_02623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000745927.1,SO:0001217,UniParc:UPI0001B700EE,UniRef:UniRef100_UPI0001B700EE,UniRef:UniRef50_Q5HCR7,UniRef:UniRef90_Q5HCR7
contig_1	Pyrodigal	gene	2658315	2659019	.	-	.	ID=GCA000160335_02624_gene;locus_tag=GCA000160335_02624;gene=arcR
contig_1	Pyrodigal	CDS	2658315	2659019	.	-	0	ID=GCA000160335_02624;Name=HTH-type transcriptional regulator ArcR;locus_tag=GCA000160335_02624;product=HTH-type transcriptional regulator ArcR;Dbxref=GO:0003677,GO:0005737,GO:0030552;gene=arcR;Parent=GCA000160335_02624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,KEGG:K21828,RefSeq:WP_000138218.1,SO:0001217,UniParc:UPI00000CAC67,UniRef:UniRef100_Q99R06,UniRef:UniRef50_Q2FUY1,UniRef:UniRef90_Q2FUY1
contig_1	Pyrodigal	gene	2659118	2660059	.	-	.	ID=GCA000160335_02625_gene;locus_tag=GCA000160335_02625;gene=arcC
contig_1	Pyrodigal	CDS	2659118	2660059	.	-	0	ID=GCA000160335_02625;Name=carbamate kinase;locus_tag=GCA000160335_02625;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000160335_02625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000660023.1,SO:0001217,UniParc:UPI00004CE195,UniRef:UniRef100_Q6GDH0,UniRef:UniRef50_P0A2X7,UniRef:UniRef90_P63555;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	2660076	2661506	.	-	.	ID=GCA000160335_02626_gene;locus_tag=GCA000160335_02626;gene=arcD
contig_1	Pyrodigal	CDS	2660076	2661506	.	-	0	ID=GCA000160335_02626;Name=arginine-ornithine antiporter;locus_tag=GCA000160335_02626;product=arginine-ornithine antiporter;Dbxref=GO:0005886,GO:0006527,GO:0043858,GO:1903826;gene=arcD;Parent=GCA000160335_02626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,KEGG:K03758,RefSeq:WP_001005831.1,SO:0001217,UniParc:UPI000197A970,UniRef:UniRef100_A0A0Y9RFY3,UniRef:UniRef50_A0A0Y9RFY3,UniRef:UniRef90_A0A0Y9RFY3
contig_1	Pyrodigal	gene	2661597	2662607	.	-	.	ID=GCA000160335_02627_gene;locus_tag=GCA000160335_02627;gene=argF
contig_1	Pyrodigal	CDS	2661597	2662607	.	-	0	ID=GCA000160335_02627;Name=ornithine carbamoyltransferase;locus_tag=GCA000160335_02627;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0019547,GO:0042450;gene=argF;Parent=GCA000160335_02627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000136159.1,SO:0001217,UniParc:UPI00003B19CF,UniRef:UniRef100_Q6GDG8,UniRef:UniRef50_P08308,UniRef:UniRef90_P65601;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	2662640	2663875	.	-	.	ID=GCA000160335_02628_gene;locus_tag=GCA000160335_02628;gene=arcA
contig_1	Pyrodigal	CDS	2662640	2663875	.	-	0	ID=GCA000160335_02628;Name=arginine deiminase;locus_tag=GCA000160335_02628;product=arginine deiminase;Dbxref=GO:0005737,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000160335_02628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2235,COG:E,RefSeq:WP_000129413.1,SO:0001217,UniParc:UPI00003B19D0,UniRef:UniRef100_Q6GDG7,UniRef:UniRef50_O86131,UniRef:UniRef90_Q2FUX7;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	2664222	2664671	.	-	.	ID=GCA000160335_02629_gene;locus_tag=GCA000160335_02629;gene=argR
contig_1	Pyrodigal	CDS	2664222	2664671	.	-	0	ID=GCA000160335_02629;Name=Arginine repressor;locus_tag=GCA000160335_02629;product=Arginine repressor;gene=argR;Parent=GCA000160335_02629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,RefSeq:WP_000748756.1,SO:0001217,UniParc:UPI00003B19D1,UniRef:UniRef100_A0A0E1XCI8,UniRef:UniRef50_A0A2K4AHB6,UniRef:UniRef90_A0A2K4AHB6
contig_1	Pyrodigal	gene	2665038	2666567	.	-	.	ID=GCA000160335_02630_gene;locus_tag=GCA000160335_02630;gene=aur
contig_1	Pyrodigal	CDS	2665038	2666567	.	-	0	ID=GCA000160335_02630;Name=zinc metalloproteinase aureolysin;locus_tag=GCA000160335_02630;product=zinc metalloproteinase aureolysin;Dbxref=GO:0004222,GO:0006508,GO:0046872;gene=aur;Parent=GCA000160335_02630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001225028,COG:COG3227,COG:O,KEGG:K01401,NCBIProtein:EHO93748.1,RefSeq:WP_001225040.1,SO:0001217,UniParc:UPI0000126664,UniRef:UniRef100_P81177,UniRef:UniRef50_P81177,UniRef:UniRef90_P81177;ec_number=3.4.24.29
contig_1	Pyrodigal	gene	2666981	2667508	.	-	.	ID=GCA000160335_02631_gene;locus_tag=GCA000160335_02631;gene=isaB
contig_1	Pyrodigal	CDS	2666981	2667508	.	-	0	ID=GCA000160335_02631;Name=immunodominant staphylococcal antigen IsaB;locus_tag=GCA000160335_02631;product=immunodominant staphylococcal antigen IsaB;Dbxref=GO:0005576;gene=isaB;Parent=GCA000160335_02631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001044560,BlastRules:WP_001077096,RefSeq:WP_001077095.1,SO:0001217,UniParc:UPI0001B700F0,UniRef:UniRef100_UPI0001B700F0,UniRef:UniRef50_Q2FUX3,UniRef:UniRef90_Q6GDG4
contig_1	Pyrodigal	gene	2667764	2668237	.	+	.	ID=GCA000160335_02632_gene;locus_tag=GCA000160335_02632
contig_1	Pyrodigal	CDS	2667764	2668237	.	+	0	ID=GCA000160335_02632;Name=Low-complexity protein;locus_tag=GCA000160335_02632;product=Low-complexity protein;Parent=GCA000160335_02632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000714024.1,SO:0001217,UniParc:UPI000197A96F,UniRef:UniRef100_A0A131HYS9,UniRef:UniRef50_Q2FUX2,UniRef:UniRef90_A0A0U1MUL4
contig_1	Pyrodigal	gene	2668477	2670351	.	+	.	ID=GCA000160335_02633_gene;locus_tag=GCA000160335_02633;gene=bglG
contig_1	Pyrodigal	CDS	2668477	2670351	.	+	0	ID=GCA000160335_02633;Name=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;locus_tag=GCA000160335_02633;product=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;gene=bglG;Parent=GCA000160335_02633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K02538,RefSeq:WP_000887007.1,SO:0001217,UniParc:UPI00003B19D4,UniRef:UniRef100_A0A0E1XAT1,UniRef:UniRef50_A0A2I7YB65,UniRef:UniRef90_A0A2I7YB65
contig_1	Pyrodigal	gene	2670428	2672380	.	+	.	ID=GCA000160335_02634_gene;locus_tag=GCA000160335_02634;gene=ptsN
contig_1	Pyrodigal	CDS	2670428	2672380	.	+	0	ID=GCA000160335_02634;Name=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;locus_tag=GCA000160335_02634;product=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;gene=ptsN;Parent=GCA000160335_02634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000706117.1,SO:0001217,UniParc:UPI00003B19D5,UniRef:UniRef100_A0A7Z7R1A5,UniRef:UniRef50_O31645,UniRef:UniRef90_A0A0U1MW07
contig_1	Pyrodigal	gene	2672394	2673332	.	+	.	ID=GCA000160335_02635_gene;locus_tag=GCA000160335_02635;gene=manA
contig_1	Pyrodigal	CDS	2672394	2673332	.	+	0	ID=GCA000160335_02635;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000160335_02635;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000160335_02635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001173203.1,SO:0001217,UniParc:UPI00003B19D6,UniRef:UniRef100_A0A7Z7R1M5,UniRef:UniRef50_Q59935,UniRef:UniRef90_A0A0D1I542;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2673444	2676425	.	-	.	ID=GCA000160335_02636_gene;locus_tag=GCA000160335_02636;gene=yhgE
contig_1	Pyrodigal	CDS	2673444	2676425	.	-	0	ID=GCA000160335_02636;Name=Phage infection protein%2C putative;locus_tag=GCA000160335_02636;product=Phage infection protein%2C putative;gene=yhgE;Parent=GCA000160335_02636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000786119.1,SO:0001217,UniParc:UPI00003B19D7,UniRef:UniRef100_A0A131JTR6,UniRef:UniRef50_Q49UI0,UniRef:UniRef90_Q2G221
contig_1	Pyrodigal	gene	2676636	2678495	.	+	.	ID=GCA000160335_02637_gene;locus_tag=GCA000160335_02637
contig_1	Pyrodigal	CDS	2676636	2678495	.	+	0	ID=GCA000160335_02637;Name=amidase domain-containing protein;locus_tag=GCA000160335_02637;product=amidase domain-containing protein;Dbxref=GO:0004040,GO:0005576;Parent=GCA000160335_02637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_001125631.1,SO:0001217,UniParc:UPI00003B19D8,UniRef:UniRef100_A0A7Z7R1Z1,UniRef:UniRef50_Q2G222,UniRef:UniRef90_Q2G222
contig_1	Pyrodigal	gene	2678760	2679320	.	-	.	ID=GCA000160335_02638_gene;locus_tag=GCA000160335_02638;gene=pncA
contig_1	Pyrodigal	CDS	2678760	2679320	.	-	0	ID=GCA000160335_02638;Name=Isochorismatase-like domain-containing protein;locus_tag=GCA000160335_02638;product=Isochorismatase-like domain-containing protein;gene=pncA;Parent=GCA000160335_02638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000088195.1,SO:0001217,UniParc:UPI00000D7800,UniRef:UniRef100_Q2G220,UniRef:UniRef50_Q2G220,UniRef:UniRef90_Q2G220
contig_1	Pyrodigal	gene	2679488	2681371	.	-	.	ID=GCA000160335_02639_gene;locus_tag=GCA000160335_02639;gene=sasF
contig_1	Pyrodigal	CDS	2679488	2681371	.	-	0	ID=GCA000160335_02639;Name=Surface protein F;locus_tag=GCA000160335_02639;product=Surface protein F;Dbxref=GO:0005576;gene=sasF;Parent=GCA000160335_02639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001151905.1,SO:0001217,UniParc:UPI000197A96D,UniRef:UniRef100_A0A7Z7W2S6,UniRef:UniRef50_Q2FUW9,UniRef:UniRef90_Q2FUW9
contig_1	Pyrodigal	gene	2681613	2682971	.	-	.	ID=GCA000160335_02640_gene;locus_tag=GCA000160335_02640;gene=gtfB
contig_1	Pyrodigal	CDS	2681613	2682971	.	-	0	ID=GCA000160335_02640;Name=accessory Sec system glycosylation chaperone GtfB;locus_tag=GCA000160335_02640;product=accessory Sec system glycosylation chaperone GtfB;Dbxref=GO:0031647;gene=gtfB;Parent=GCA000160335_02640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000593166.1,SO:0001217,UniParc:UPI00003B19DA,UniRef:UniRef100_A0A7Z7W2W9,UniRef:UniRef50_A0A7U7PX78,UniRef:UniRef90_A0A5S9I5Q0
contig_1	Pyrodigal	gene	2682964	2684472	.	-	.	ID=GCA000160335_02641_gene;locus_tag=GCA000160335_02641;gene=gtfA
contig_1	Pyrodigal	CDS	2682964	2684472	.	-	0	ID=GCA000160335_02641;Name=accessory Sec system glycosyltransferase GtfA;locus_tag=GCA000160335_02641;product=accessory Sec system glycosyltransferase GtfA;Dbxref=GO:0016757;gene=gtfA;Parent=GCA000160335_02641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000158417.1,SO:0001217,UniParc:UPI00003B19DB,UniRef:UniRef100_A0A7Z7W349,UniRef:UniRef50_A0A077UJB5,UniRef:UniRef90_A0A390ZTZ9
contig_1	Pyrodigal	gene	2684490	2686880	.	-	.	ID=GCA000160335_02642_gene;locus_tag=GCA000160335_02642;gene=secA2
contig_1	Pyrodigal	CDS	2684490	2686880	.	-	0	ID=GCA000160335_02642;Name=accessory Sec system translocase SecA2;locus_tag=GCA000160335_02642;product=accessory Sec system translocase SecA2;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0008564,GO:0015031,GO:0015450,GO:0017038,GO:0031522,GO:0043952,GO:0065002;gene=secA2;Parent=GCA000160335_02642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,RefSeq:WP_000680966.1,SO:0001217,UniParc:UPI00003B19DC,UniRef:UniRef100_Q6GDF3,UniRef:UniRef50_Q2FUW6,UniRef:UniRef90_Q2FUW6;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	2686870	2687829	.	-	.	ID=GCA000160335_02643_gene;locus_tag=GCA000160335_02643;gene=asp3
contig_1	Pyrodigal	CDS	2686870	2687829	.	-	0	ID=GCA000160335_02643;Name=accessory Sec system protein Asp3;locus_tag=GCA000160335_02643;product=accessory Sec system protein Asp3;Dbxref=GO:0006886,GO:0015031;gene=asp3;Parent=GCA000160335_02643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12270,RefSeq:WP_000916740.1,SO:0001217,UniParc:UPI00003B19DD,UniRef:UniRef100_A0A7Z7W436,UniRef:UniRef50_Q2FUW5,UniRef:UniRef90_Q2FUW5
contig_1	Pyrodigal	gene	2687807	2689378	.	-	.	ID=GCA000160335_02644_gene;locus_tag=GCA000160335_02644;gene=asp2
contig_1	Pyrodigal	CDS	2687807	2689378	.	-	0	ID=GCA000160335_02644;Name=accessory Sec system protein Asp2;locus_tag=GCA000160335_02644;product=accessory Sec system protein Asp2;Dbxref=GO:0006886,GO:0015031;gene=asp2;Parent=GCA000160335_02644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12269,SO:0001217,UniParc:UPI00019CD6A5,UniRef:UniRef100_A0A0Z3EE35,UniRef:UniRef50_Q2FUW4,UniRef:UniRef90_Q2FUW4
contig_1	Pyrodigal	gene	2689365	2690918	.	-	.	ID=GCA000160335_02645_gene;locus_tag=GCA000160335_02645;gene=asp1
contig_1	Pyrodigal	CDS	2689365	2690918	.	-	0	ID=GCA000160335_02645;Name=accessory Sec system protein Asp1;locus_tag=GCA000160335_02645;product=accessory Sec system protein Asp1;Dbxref=GO:0006886,GO:0015031;gene=asp1;Parent=GCA000160335_02645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000873214.1,SO:0001217,UniParc:UPI000197A96C,UniRef:UniRef100_A0A131HX15,UniRef:UniRef50_Q2FUW3,UniRef:UniRef90_Q2FUW3
contig_1	Pyrodigal	gene	2690929	2692140	.	-	.	ID=GCA000160335_02646_gene;locus_tag=GCA000160335_02646;gene=secY2
contig_1	Pyrodigal	CDS	2690929	2692140	.	-	0	ID=GCA000160335_02646;Name=accessory Sec system protein translocase subunit SecY2;locus_tag=GCA000160335_02646;product=accessory Sec system protein translocase subunit SecY2;Dbxref=GO:0005886,GO:0006605,GO:0065002;gene=secY2;Parent=GCA000160335_02646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000916107.1,SO:0001217,UniParc:UPI00003B19DF,UniRef:UniRef100_A0A7Z7R0W3,UniRef:UniRef50_Q2FUW2,UniRef:UniRef90_Q2FUW2
contig_1	Pyrodigal	gene	2692269	2697350	.	-	.	ID=GCA000160335_02647_gene;locus_tag=GCA000160335_02647
contig_1	Pyrodigal	CDS	2692269	2697350	.	-	0	ID=GCA000160335_02647;Name=Serine-rich adhesin for platelets;locus_tag=GCA000160335_02647;product=Serine-rich adhesin for platelets;Parent=GCA000160335_02647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000044585.1,SO:0001217,UniParc:UPI0001B70240,UniRef:UniRef100_UPI0001B70240,UniRef:UniRef50_A0A659ZZJ7,UniRef:UniRef90_A0A659ZZJ7
contig_1	Pyrodigal	gene	2697897	2698589	.	-	.	ID=GCA000160335_02648_gene;locus_tag=GCA000160335_02648;gene=rutF
contig_1	Pyrodigal	CDS	2697897	2698589	.	-	0	ID=GCA000160335_02648;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000160335_02648;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000160335_02648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_001109886.1,SO:0001217,UniParc:UPI000197A96A,UniRef:UniRef100_A0A113Y0V5,UniRef:UniRef50_K8DVZ2,UniRef:UniRef90_K8DWD5
contig_1	Pyrodigal	gene	2698903	2699193	.	+	.	ID=GCA000160335_02649_gene;locus_tag=GCA000160335_02649
contig_1	Pyrodigal	CDS	2698903	2699193	.	+	0	ID=GCA000160335_02649;Name=Lipoprotein;locus_tag=GCA000160335_02649;product=Lipoprotein;Parent=GCA000160335_02649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD6A2,UniRef:UniRef100_A0A0E1XCH4,UniRef:UniRef50_A0A0E1XCH4,UniRef:UniRef90_A0A0E1XCH4
contig_1	Pyrodigal	gene	2699334	2699846	.	+	.	ID=GCA000160335_02650_gene;locus_tag=GCA000160335_02650
contig_1	Pyrodigal	CDS	2699334	2699846	.	+	0	ID=GCA000160335_02650;Name=Lipoprotein;locus_tag=GCA000160335_02650;product=Lipoprotein;Parent=GCA000160335_02650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00019CD6A1,UniRef:UniRef100_A0A0E1XAW5,UniRef:UniRef50_A0A0E1XAW5,UniRef:UniRef90_A0A0E1XAW5
contig_1	Pyrodigal	gene	2699833	2700135	.	+	.	ID=GCA000160335_02651_gene;locus_tag=GCA000160335_02651
contig_1	Pyrodigal	CDS	2699833	2700135	.	+	0	ID=GCA000160335_02651;Name=Phage protein;locus_tag=GCA000160335_02651;product=Phage protein;Parent=GCA000160335_02651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001260046.1,SO:0001217,UniParc:UPI00003B19E2,UniRef:UniRef100_A0A7Z7R142,UniRef:UniRef50_A0A7U7PXN0,UniRef:UniRef90_A0A0D1JH46
contig_1	Pyrodigal	gene	2700285	2700644	.	+	.	ID=GCA000160335_02652_gene;locus_tag=GCA000160335_02652;gene=doxX
contig_1	Pyrodigal	CDS	2700285	2700644	.	+	0	ID=GCA000160335_02652;Name=DoxX family protein;locus_tag=GCA000160335_02652;product=DoxX family protein;gene=doxX;Parent=GCA000160335_02652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000603494.1,SO:0001217,UniParc:UPI0001B70119,UniRef:UniRef100_UPI0001B70119,UniRef:UniRef50_A0A1E9AB62,UniRef:UniRef90_Q2FUV7
contig_1	Pyrodigal	gene	2700729	2701340	.	-	.	ID=GCA000160335_02653_gene;locus_tag=GCA000160335_02653;gene=rutF
contig_1	Pyrodigal	CDS	2700729	2701340	.	-	0	ID=GCA000160335_02653;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000160335_02653;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000160335_02653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_000556740.1,SO:0001217,UniParc:UPI00003B19E4,UniRef:UniRef100_A0A7Z7R1U5,UniRef:UniRef50_F4BMC7,UniRef:UniRef90_A0A7U7JRS4
contig_1	Pyrodigal	gene	2701419	2701895	.	-	.	ID=GCA000160335_02654_gene;locus_tag=GCA000160335_02654;gene=msrA
contig_1	Pyrodigal	CDS	2701419	2701895	.	-	0	ID=GCA000160335_02654;Name=peptide-methionine (S)-S-oxide reductase;locus_tag=GCA000160335_02654;product=peptide-methionine (S)-S-oxide reductase;Dbxref=GO:0008113;gene=msrA;Parent=GCA000160335_02654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_000301935.1,SO:0001217,UniParc:UPI00003B19E5,UniRef:UniRef100_A0A131HWZ4,UniRef:UniRef50_M7NDY9,UniRef:UniRef90_A0A131HWZ4;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	2701898	2702398	.	-	.	ID=GCA000160335_02655_gene;locus_tag=GCA000160335_02655;gene=yhbS
contig_1	Pyrodigal	CDS	2701898	2702398	.	-	0	ID=GCA000160335_02655;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02655;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000160335_02655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_000244276.1,SO:0001217,UniParc:UPI00003B19E6,UniRef:UniRef100_A0A7Z7W2X2,UniRef:UniRef50_Q2FUV4,UniRef:UniRef90_Q2FUV4
contig_1	Pyrodigal	gene	2702633	2703400	.	-	.	ID=GCA000160335_02656_gene;locus_tag=GCA000160335_02656;gene=ywqE
contig_1	Pyrodigal	CDS	2702633	2703400	.	-	0	ID=GCA000160335_02656;Name=Tyrosine-protein phosphatase;locus_tag=GCA000160335_02656;product=Tyrosine-protein phosphatase;gene=ywqE;Parent=GCA000160335_02656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4464,COG:T,RefSeq:WP_000565312.1,SO:0001217,UniParc:UPI00003B19E7,UniRef:UniRef100_A0A7Z7W355,UniRef:UniRef50_P39852,UniRef:UniRef90_A0A0U1MU51
contig_1	Pyrodigal	gene	2703397	2704089	.	-	.	ID=GCA000160335_02657_gene;locus_tag=GCA000160335_02657;gene=mrp
contig_1	Pyrodigal	CDS	2703397	2704089	.	-	0	ID=GCA000160335_02657;Name=non-specific protein-tyrosine kinase;locus_tag=GCA000160335_02657;product=non-specific protein-tyrosine kinase;gene=mrp;Parent=GCA000160335_02657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000185861.1,SO:0001217,UniParc:UPI00015E18DA,UniRef:UniRef100_A8YPQ5,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ5
contig_1	Pyrodigal	gene	2704106	2704768	.	-	.	ID=GCA000160335_02658_gene;locus_tag=GCA000160335_02658;gene=capA
contig_1	Pyrodigal	CDS	2704106	2704768	.	-	0	ID=GCA000160335_02658;Name=Capsular polysaccharide biosynthesis protein CapA;locus_tag=GCA000160335_02658;product=Capsular polysaccharide biosynthesis protein CapA;Dbxref=GO:0004713,GO:0005886,GO:0045227;gene=capA;Parent=GCA000160335_02658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3944,COG:M,RefSeq:WP_000659672.1,SO:0001217,UniParc:UPI0001B7011A,UniRef:UniRef100_UPI0001B7011A,UniRef:UniRef50_Q5HCN3,UniRef:UniRef90_Q5HCN3
contig_1	Pyrodigal	gene	2705614	2706174	.	-	.	ID=GCA000160335_02659_gene;locus_tag=GCA000160335_02659;gene=icaR
contig_1	Pyrodigal	CDS	2705614	2706174	.	-	0	ID=GCA000160335_02659;Name=ica operon transcriptional regulator IcaR;locus_tag=GCA000160335_02659;product=ica operon transcriptional regulator IcaR;Dbxref=GO:0003677;gene=icaR;Parent=GCA000160335_02659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000653261,COG:COG1309,COG:K,RefSeq:WP_000653261.1,SO:0001217,UniParc:UPI00000D7897,UniRef:UniRef100_Q9RQQ0,UniRef:UniRef50_Q5HKQ1,UniRef:UniRef90_Q9RQQ0
contig_1	Infernal	regulatory_region	2706172	2706246	3.8e-17	-	.	ID=HBCHLJIIAO_153;Name=icaR 5' UTR;product=icaR 5' UTR;Dbxref=RFAM:RF02661;inference=profile:Rfam:RF02661;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2706338	2707576	.	+	.	ID=GCA000160335_02660_gene;locus_tag=GCA000160335_02660;gene=icaA
contig_1	Pyrodigal	CDS	2706338	2707576	.	+	0	ID=GCA000160335_02660;Name=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000160335_02660;product=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0005886,GO:0008375,GO:0042710,GO:0043708;gene=icaA;Parent=GCA000160335_02660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,RefSeq:WP_001159430.1,SO:0001217,UniParc:UPI00000CAC33,UniRef:UniRef100_Q9RQP9,UniRef:UniRef50_Q5HKQ0,UniRef:UniRef90_Q9RQP9,VFDB:VFC0271,VFDB:VFG001285;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2707540	2707845	.	+	.	ID=GCA000160335_02661_gene;locus_tag=GCA000160335_02661;gene=icaD
contig_1	Pyrodigal	CDS	2707540	2707845	.	+	0	ID=GCA000160335_02661;Name=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000160335_02661;product=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005886,GO:0008375;gene=icaD;Parent=GCA000160335_02661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21461,RefSeq:WP_000240578.1,SO:0001217,UniParc:UPI00003B19EA,UniRef:UniRef100_Q6GDD7,UniRef:UniRef50_Q5HKP9,UniRef:UniRef90_Q6GDD7,VFDB:VFC0271,VFDB:VFG001286
contig_1	Pyrodigal	gene	2707842	2708714	.	+	.	ID=GCA000160335_02662_gene;locus_tag=GCA000160335_02662;gene=icaB
contig_1	Pyrodigal	CDS	2707842	2708714	.	+	0	ID=GCA000160335_02662;Name=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000160335_02662;product=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005576,GO:0005975,GO:0016811,GO:0019213;gene=icaB;Parent=GCA000160335_02662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0726,COG:GM,KEGG:K21478,RefSeq:WP_000877367.1,SO:0001217,UniParc:UPI00003B19EB,UniRef:UniRef100_Q6GDD6,UniRef:UniRef50_Q9RQP7,UniRef:UniRef90_Q9RQP7,VFDB:VFC0271,VFDB:VFG001287;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	2708701	2709612	.	+	.	ID=GCA000160335_02663_gene;locus_tag=GCA000160335_02663;gene=icaC
contig_1	Pyrodigal	CDS	2708701	2709612	.	+	0	ID=GCA000160335_02663;Name=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;locus_tag=GCA000160335_02663;product=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;Dbxref=GO:0005886,GO:0009246,GO:0016413;gene=icaC;Parent=GCA000160335_02663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3936,COG:G,KEGG:K21462,NCBIProtein:AUU58561.1,SO:0001217,UniRef:UniRef50_Q5HKP7,UniRef:UniRef90_Q9RQP6
contig_1	Infernal	gene	2709873	2710114	.	+	.	ID=GCA000160335_02664_gene;locus_tag=GCA000160335_02664;gene=S35
contig_1	Infernal	ncRNA	2709873	2710114	1.7e-19	+	.	ID=GCA000160335_02664;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02664;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02664_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2710149	2712194	.	-	.	ID=GCA000160335_02665_gene;locus_tag=GCA000160335_02665;gene=lip1
contig_1	Pyrodigal	CDS	2710149	2712194	.	-	0	ID=GCA000160335_02665;Name=YSIRK domain-containing triacylglycerol lipase Lip1;locus_tag=GCA000160335_02665;product=YSIRK domain-containing triacylglycerol lipase Lip1;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=lip1;Parent=GCA000160335_02665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000842036,COG:COG1075,COG:I,KEGG:K01046,SO:0001217,UniParc:UPI0001B701F8,UniRef:UniRef100_A0A658WLL2,UniRef:UniRef50_Q6GDD3,UniRef:UniRef90_P65288;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	2713282	2713914	.	-	.	ID=GCA000160335_02666_gene;locus_tag=GCA000160335_02666;gene=hisIE
contig_1	Pyrodigal	CDS	2713282	2713914	.	-	0	ID=GCA000160335_02666;Name=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;locus_tag=GCA000160335_02666;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;Dbxref=GO:0000105,GO:0004635,GO:0004636,GO:0005524,GO:0005737;gene=hisIE;Parent=GCA000160335_02666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000186284.1,SO:0001217,UniParc:UPI000012C791,UniRef:UniRef100_Q5HCM5,UniRef:UniRef50_Q8CQ91,UniRef:UniRef90_Q5HCM5;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	2713911	2714669	.	-	.	ID=GCA000160335_02667_gene;locus_tag=GCA000160335_02667;gene=hisF
contig_1	Pyrodigal	CDS	2713911	2714669	.	-	0	ID=GCA000160335_02667;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000160335_02667;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000160335_02667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B19EF,UniRef:UniRef100_Q6GDD1,UniRef:UniRef50_Q6GDD1,UniRef:UniRef90_Q6GDD1;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2714666	2715370	.	-	.	ID=GCA000160335_02668_gene;locus_tag=GCA000160335_02668;gene=hisA
contig_1	Pyrodigal	CDS	2714666	2715370	.	-	0	ID=GCA000160335_02668;Name=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;locus_tag=GCA000160335_02668;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0005737;gene=hisA;Parent=GCA000160335_02668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,RefSeq:WP_000571739.1,SO:0001217,UniParc:UPI00003B19F0,UniRef:UniRef100_Q6GDD0,UniRef:UniRef50_Q2FUU2,UniRef:UniRef90_Q2FUU2;ec_number=5.3.1.16
contig_1	Pyrodigal	gene	2715363	2715941	.	-	.	ID=GCA000160335_02669_gene;locus_tag=GCA000160335_02669;gene=hisH
contig_1	Pyrodigal	CDS	2715363	2715941	.	-	0	ID=GCA000160335_02669;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000160335_02669;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0016829;gene=hisH;Parent=GCA000160335_02669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0118,COG:E,RefSeq:WP_000635614.1,SO:0001217,UniParc:UPI0001B70120,UniRef:UniRef100_UPI0001B70120,UniRef:UniRef50_Q4A047,UniRef:UniRef90_Q5HCM2;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2715938	2716516	.	-	.	ID=GCA000160335_02670_gene;locus_tag=GCA000160335_02670;gene=hisB
contig_1	Pyrodigal	CDS	2715938	2716516	.	-	0	ID=GCA000160335_02670;Name=imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000160335_02670;product=imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004424,GO:0005737;gene=hisB;Parent=GCA000160335_02670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0131,COG:E,RefSeq:WP_000640272.1,SO:0001217,UniParc:UPI00003B19F2,UniRef:UniRef100_Q6GDC8,UniRef:UniRef50_Q2FUU0,UniRef:UniRef90_Q2FUU0;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	2716485	2717498	.	-	.	ID=GCA000160335_02671_gene;locus_tag=GCA000160335_02671;gene=hisC
contig_1	Pyrodigal	CDS	2716485	2717498	.	-	0	ID=GCA000160335_02671;Name=Putative pyridoxal phosphate-dependent acyltransferase;locus_tag=GCA000160335_02671;product=Putative pyridoxal phosphate-dependent acyltransferase;gene=hisC;Parent=GCA000160335_02671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,RefSeq:WP_000639198.1,SO:0001217,UniParc:UPI000197A938,UniRef:UniRef100_A0A380EMV4,UniRef:UniRef50_A0A389Q8Y1,UniRef:UniRef90_A0A389Q8Y1
contig_1	Pyrodigal	gene	2717514	2718764	.	-	.	ID=GCA000160335_02672_gene;locus_tag=GCA000160335_02672;gene=hisD
contig_1	Pyrodigal	CDS	2717514	2718764	.	-	0	ID=GCA000160335_02672;Name=histidinol dehydrogenase;locus_tag=GCA000160335_02672;product=histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005829,GO:0008270,GO:0051287;gene=hisD;Parent=GCA000160335_02672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0141,COG:E,KEGG:K00013,RefSeq:WP_000930640.1,SO:0001217,UniParc:UPI00019CD65D,UniRef:UniRef100_Q6GDC6,UniRef:UniRef50_Q8CQ95,UniRef:UniRef90_P63952;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	2718757	2719371	.	-	.	ID=GCA000160335_02673_gene;locus_tag=GCA000160335_02673;gene=hisG
contig_1	Pyrodigal	CDS	2718757	2719371	.	-	0	ID=GCA000160335_02673;Name=ATP phosphoribosyltransferase;locus_tag=GCA000160335_02673;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0003879,GO:0005524,GO:0005737;gene=hisG;Parent=GCA000160335_02673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0040,COG:E,KEGG:K00765,RefSeq:WP_000944135.1,SO:0001217,UniParc:UPI00003B19F5,UniRef:UniRef100_Q6GDC5,UniRef:UniRef50_Q2FUT7,UniRef:UniRef90_Q2FUT7;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	2719389	2720207	.	-	.	ID=GCA000160335_02674_gene;locus_tag=GCA000160335_02674;gene=hisZ
contig_1	Pyrodigal	CDS	2719389	2720207	.	-	0	ID=GCA000160335_02674;Name=ATP phosphoribosyltransferase regulatory subunit;locus_tag=GCA000160335_02674;product=ATP phosphoribosyltransferase regulatory subunit;Dbxref=GO:0000105,GO:0005737,GO:0016740;gene=hisZ;Parent=GCA000160335_02674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3705,COG:E,RefSeq:WP_001065582.1,SO:0001217,UniParc:UPI00003B19F6,UniRef:UniRef100_Q6GDC4,UniRef:UniRef50_Q2FUT6,UniRef:UniRef90_Q2FUT6
contig_1	Pyrodigal	gene	2720511	2721635	.	-	.	ID=GCA000160335_02675_gene;locus_tag=GCA000160335_02675
contig_1	Pyrodigal	CDS	2720511	2721635	.	-	0	ID=GCA000160335_02675;Name=NodB-like y domain-containing protein;locus_tag=GCA000160335_02675;product=NodB-like y domain-containing protein;Parent=GCA000160335_02675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549234.1,SO:0001217,UniParc:UPI00003B19F7,UniRef:UniRef100_A0A7Z7R1K5,UniRef:UniRef50_Q2FUT5,UniRef:UniRef90_Q2FUT5
contig_1	Pyrodigal	gene	2721753	2722250	.	-	.	ID=GCA000160335_02676_gene;locus_tag=GCA000160335_02676;gene=rimL
contig_1	Pyrodigal	CDS	2721753	2722250	.	-	0	ID=GCA000160335_02676;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000160335_02676;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000160335_02676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000610969.1,SO:0001217,UniParc:UPI00003B19F8,UniRef:UniRef100_A0A7Z7R0Y0,UniRef:UniRef50_Q2FUT4,UniRef:UniRef90_Q2FUT4
contig_1	Pyrodigal	gene	2722297	2723130	.	-	.	ID=GCA000160335_02677_gene;locus_tag=GCA000160335_02677;gene=ecfT
contig_1	Pyrodigal	CDS	2722297	2723130	.	-	0	ID=GCA000160335_02677;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000160335_02677;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000160335_02677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_001077828.1,SO:0001217,UniParc:UPI00003B19F9,UniRef:UniRef100_A0A7Z7R0Y6,UniRef:UniRef50_A0A3A1YCN1,UniRef:UniRef90_Q2FUT3
contig_1	Pyrodigal	gene	2723127	2724839	.	-	.	ID=GCA000160335_02678_gene;locus_tag=GCA000160335_02678;gene=ecfA2
contig_1	Pyrodigal	CDS	2723127	2724839	.	-	0	ID=GCA000160335_02678;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000160335_02678;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000160335_02678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000138664.1,SO:0001217,UniParc:UPI0001B70122,UniRef:UniRef100_UPI0001B70122,UniRef:UniRef50_Q7A342,UniRef:UniRef90_Q7A342;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	2724892	2725446	.	-	.	ID=GCA000160335_02679_gene;locus_tag=GCA000160335_02679;gene=eCF-S
contig_1	Pyrodigal	CDS	2724892	2725446	.	-	0	ID=GCA000160335_02679;Name=ECF-type riboflavin transporter substrate-binding protein;locus_tag=GCA000160335_02679;product=ECF-type riboflavin transporter substrate-binding protein;Dbxref=GO:0005886,GO:0016020;gene=eCF-S;Parent=GCA000160335_02679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4720,COG:H,KEGG:K16924,RefSeq:WP_000743709.1,SO:0001217,UniParc:UPI00003B19FB,UniRef:UniRef100_Q6GDB9,UniRef:UniRef50_Q2FUT1,UniRef:UniRef90_Q2FUT1
contig_1	Pyrodigal	gene	2725475	2726323	.	-	.	ID=GCA000160335_02680_gene;locus_tag=GCA000160335_02680
contig_1	Pyrodigal	CDS	2725475	2726323	.	-	0	ID=GCA000160335_02680;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000160335_02680;product=DNA-directed RNA polymerase subunit delta;Parent=GCA000160335_02680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1912,COG:HV,RefSeq:WP_000528924.1,SO:0001217,UniParc:UPI00003B19FC,UniRef:UniRef100_A0A7Z7R1R9,UniRef:UniRef50_A0A2L0D2I0,UniRef:UniRef90_Q2FUT0
contig_1	Pyrodigal	gene	2726705	2727220	.	+	.	ID=GCA000160335_02681_gene;locus_tag=GCA000160335_02681;gene=yceI
contig_1	Pyrodigal	CDS	2726705	2727220	.	+	0	ID=GCA000160335_02681;Name=UPF0312 protein SAOUHSC_03022;locus_tag=GCA000160335_02681;product=UPF0312 protein SAOUHSC_03022;gene=yceI;Parent=GCA000160335_02681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2353,COG:R,RefSeq:WP_000181127.1,SO:0001217,UniParc:UPI00003B19FD,UniRef:UniRef100_Q6GDB7,UniRef:UniRef50_Q2FUS9,UniRef:UniRef90_Q2FUS9
contig_1	Pyrodigal	gene	2727366	2728340	.	-	.	ID=GCA000160335_02682_gene;locus_tag=GCA000160335_02682;gene=drp35
contig_1	Pyrodigal	CDS	2727366	2728340	.	-	0	ID=GCA000160335_02682;Name=Lactonase drp35;locus_tag=GCA000160335_02682;product=Lactonase drp35;Dbxref=GO:0005737,GO:0016787,GO:0046872;gene=drp35;Parent=GCA000160335_02682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3386,COG:G,KEGG:K02352,SO:0001217,UniParc:UPI00003B19FE,UniRef:UniRef100_Q6GDB6,UniRef:UniRef50_Q9S0S3,UniRef:UniRef90_Q9S0S3;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2728581	2729537	.	+	.	ID=GCA000160335_02683_gene;locus_tag=GCA000160335_02683;gene=trhO
contig_1	Pyrodigal	CDS	2728581	2729537	.	+	0	ID=GCA000160335_02683;Name=rhodanese-related sulfurtransferase;locus_tag=GCA000160335_02683;product=rhodanese-related sulfurtransferase;Dbxref=GO:0006400,GO:0016705;gene=trhO;Parent=GCA000160335_02683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1054,COG:J,KEGG:K07146,RefSeq:WP_001109292.1,SO:0001217,UniParc:UPI00003B19FF,UniRef:UniRef100_Q6GDB5,UniRef:UniRef50_Q2NIJ6,UniRef:UniRef90_Q2FUS7;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2729690	2730328	.	+	.	ID=GCA000160335_02684_gene;locus_tag=GCA000160335_02684;gene=pcp
contig_1	Pyrodigal	CDS	2729690	2730328	.	+	0	ID=GCA000160335_02684;Name=pyroglutamyl-peptidase I;locus_tag=GCA000160335_02684;product=pyroglutamyl-peptidase I;Dbxref=GO:0005829,GO:0006508,GO:0008234,GO:0016920;gene=pcp;Parent=GCA000160335_02684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2039,COG:O,KEGG:K01304,RefSeq:WP_000547822.1,SO:0001217,UniParc:UPI0001B7002B,UniRef:UniRef100_UPI0001B7002B,UniRef:UniRef50_Q53596,UniRef:UniRef90_Q53596;ec_number=3.4.19.3
contig_1	Pyrodigal	gene	2730431	2730895	.	+	.	ID=GCA000160335_02685_gene;locus_tag=GCA000160335_02685;gene=bstA
contig_1	Pyrodigal	CDS	2730431	2730895	.	+	0	ID=GCA000160335_02685;Name=bacillithiol transferase BstA;locus_tag=GCA000160335_02685;product=bacillithiol transferase BstA;gene=bstA;Parent=GCA000160335_02685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000208915,BlastRules:WP_003243944,RefSeq:WP_000208922.1,SO:0001217,UniParc:UPI00003B1A01,UniRef:UniRef100_A0A0E1XCE1,UniRef:UniRef50_Q2FUS3,UniRef:UniRef90_Q2FUS3
contig_1	Pyrodigal	gene	2731056	2734607	.	-	.	ID=GCA000160335_02686_gene;locus_tag=GCA000160335_02686;gene=cna
contig_1	Pyrodigal	CDS	2731056	2734607	.	-	0	ID=GCA000160335_02686;Name=collagen adhesin Cna;locus_tag=GCA000160335_02686;product=collagen adhesin Cna;gene=cna;Parent=GCA000160335_02686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001039417,NCBIProtein:BAB96477.1,RefSeq:WP_001039406.1,SO:0001217,UniParc:UPI00003B1A02,UniRef:UniRef100_A0A7U7IED2,UniRef:UniRef50_Q53654,UniRef:UniRef90_A0A7U7IED2
contig_1	Pyrodigal	gene	2734985	2736403	.	+	.	ID=GCA000160335_02687_gene;locus_tag=GCA000160335_02687;gene=citT
contig_1	Pyrodigal	CDS	2734985	2736403	.	+	0	ID=GCA000160335_02687;Name=2-oxoglutarate/malate translocator-like proteinue;locus_tag=GCA000160335_02687;product=2-oxoglutarate/malate translocator-like proteinue;gene=citT;Parent=GCA000160335_02687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,KEGG:K03319,RefSeq:WP_000432366.1,SO:0001217,UniParc:UPI00003B1A03,UniRef:UniRef100_A0A7Z7W455,UniRef:UniRef50_Q7WS08,UniRef:UniRef90_Q7WS08
contig_1	Pyrodigal	gene	2736952	2737860	.	-	.	ID=GCA000160335_02688_gene;locus_tag=GCA000160335_02688;gene=rarD
contig_1	Pyrodigal	CDS	2736952	2737860	.	-	0	ID=GCA000160335_02688;Name=EamA family transporter RarD;locus_tag=GCA000160335_02688;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA000160335_02688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_001091175.1,SO:0001217,UniParc:UPI00003B1A04,UniRef:UniRef100_A0A7Z7R180,UniRef:UniRef50_Q2FUS1,UniRef:UniRef90_Q2FUS1
contig_1	Pyrodigal	gene	2738082	2738657	.	+	.	ID=GCA000160335_02689_gene;locus_tag=GCA000160335_02689
contig_1	Pyrodigal	CDS	2738082	2738657	.	+	0	ID=GCA000160335_02689;Name=DNA-binding protein;locus_tag=GCA000160335_02689;product=DNA-binding protein;Parent=GCA000160335_02689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000174583.1,SO:0001217,UniParc:UPI00003B1A05,UniRef:UniRef100_A0A7Z7R1L7,UniRef:UniRef50_Q2FUS0,UniRef:UniRef90_Q2FUS0
contig_1	Pyrodigal	gene	2738821	2739837	.	+	.	ID=GCA000160335_02690_gene;locus_tag=GCA000160335_02690;gene=nixA
contig_1	Pyrodigal	CDS	2738821	2739837	.	+	0	ID=GCA000160335_02690;Name=Nickel transporter NixA;locus_tag=GCA000160335_02690;product=Nickel transporter NixA;Dbxref=GO:0005886,GO:0015099;gene=nixA;Parent=GCA000160335_02690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3376,COG:P,KEGG:K07241,RefSeq:WP_000215635.1,SO:0001217,UniParc:UPI00003B1A06,UniRef:UniRef100_A0A7Z7R0Z6,UniRef:UniRef50_Q2FUR9,UniRef:UniRef90_Q2FUR9
contig_1	Pyrodigal	gene	2740079	2740879	.	+	.	ID=GCA000160335_02691_gene;locus_tag=GCA000160335_02691
contig_1	Pyrodigal	CDS	2740079	2740879	.	+	0	ID=GCA000160335_02691;Name=Acetyltransferase;locus_tag=GCA000160335_02691;product=Acetyltransferase;Parent=GCA000160335_02691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001017413.1,SO:0001217,UniParc:UPI000197A855,UniRef:UniRef100_A0A7Z7R0Z9,UniRef:UniRef50_Q2FUR8,UniRef:UniRef90_A0A2S6DUI8
contig_1	Pyrodigal	gene	2741181	2741693	.	-	.	ID=GCA000160335_02692_gene;locus_tag=GCA000160335_02692;gene=hdeD
contig_1	Pyrodigal	CDS	2741181	2741693	.	-	0	ID=GCA000160335_02692;Name=HdeD family acid-resistance protein;locus_tag=GCA000160335_02692;product=HdeD family acid-resistance protein;gene=hdeD;Parent=GCA000160335_02692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3247,COG:R,RefSeq:WP_000410770.1,SO:0001217,UniParc:UPI000197A856,UniRef:UniRef100_A0A0E1XCZ4,UniRef:UniRef50_Q2FUR7,UniRef:UniRef90_Q2FUR7
contig_1	Pyrodigal	gene	2741983	2742741	.	+	.	ID=GCA000160335_02693_gene;locus_tag=GCA000160335_02693;gene=vraD
contig_1	Pyrodigal	CDS	2741983	2742741	.	+	0	ID=GCA000160335_02693;Name=peptide resistance ABC transporter ATP-binding subunit VraD;locus_tag=GCA000160335_02693;product=peptide resistance ABC transporter ATP-binding subunit VraD;gene=vraD;Parent=GCA000160335_02693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000154162,COG:COG1136,COG:M,RefSeq:WP_000154162.1,SO:0001217,UniParc:UPI0000054977,UniRef:UniRef100_Q2FUR6,UniRef:UniRef50_O34697,UniRef:UniRef90_A0A0Z4JTA0
contig_1	Pyrodigal	gene	2742731	2744611	.	+	.	ID=GCA000160335_02694_gene;locus_tag=GCA000160335_02694;gene=vraE
contig_1	Pyrodigal	CDS	2742731	2744611	.	+	0	ID=GCA000160335_02694;Name=peptide resistance ABC transporter permease subunit VraE;locus_tag=GCA000160335_02694;product=peptide resistance ABC transporter permease subunit VraE;gene=vraE;Parent=GCA000160335_02694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143649,KEGG:K11632,RefSeq:WP_000143675.1,SO:0001217,UniParc:UPI000197A929,UniRef:UniRef100_A0A7Z7R1S9,UniRef:UniRef50_Q9KWJ6,UniRef:UniRef90_Q9KWJ6
contig_1	Pyrodigal	gene	2744703	2744894	.	+	.	ID=GCA000160335_02695_gene;locus_tag=GCA000160335_02695;gene=vraH
contig_1	Pyrodigal	CDS	2744703	2744894	.	+	0	ID=GCA000160335_02695;Name=peptide resistance ABC transporter activity modulator VraH;locus_tag=GCA000160335_02695;product=peptide resistance ABC transporter activity modulator VraH;gene=vraH;Parent=GCA000160335_02695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000672038,RefSeq:WP_000672024.1,SO:0001217,UniParc:UPI00003B1A0B,UniRef:UniRef100_A0A7Z7R167,UniRef:UniRef50_Q5HS20,UniRef:UniRef90_A0A7Z7R167
contig_1	Pyrodigal	gene	2745512	2745913	.	+	.	ID=GCA000160335_02696_gene;locus_tag=GCA000160335_02696
contig_1	Pyrodigal	CDS	2745512	2745913	.	+	0	ID=GCA000160335_02696;Name=IS30 family transposase;locus_tag=GCA000160335_02696;product=IS30 family transposase;Dbxref=GO:0004803;Parent=GCA000160335_02696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000587505.1,SO:0001217,UniParc:UPI000197A92A,UniRef:UniRef100_A0A0E1XCY8,UniRef:UniRef50_B9E9N8,UniRef:UniRef90_A0A0E1XCY8
contig_1	Pyrodigal	gene	2745981	2746478	.	-	.	ID=GCA000160335_02697_gene;locus_tag=GCA000160335_02697
contig_1	Pyrodigal	CDS	2745981	2746478	.	-	0	ID=GCA000160335_02697;Name=Phage tail protein;locus_tag=GCA000160335_02697;product=Phage tail protein;Parent=GCA000160335_02697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000586234.1,SO:0001217,UniParc:UPI00003B1A0C,UniRef:UniRef100_A0A7Z7R1Y1,UniRef:UniRef50_Q2FUR2,UniRef:UniRef90_Q2FUR2
contig_1	Pyrodigal	gene	2746480	2747229	.	-	.	ID=GCA000160335_02698_gene;locus_tag=GCA000160335_02698
contig_1	Pyrodigal	CDS	2746480	2747229	.	-	0	ID=GCA000160335_02698;Name=Exported protein;locus_tag=GCA000160335_02698;product=Exported protein;Parent=GCA000160335_02698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000790915.1,SO:0001217,UniParc:UPI00003B1A0D,UniRef:UniRef100_A0A7Z7W2U5,UniRef:UniRef50_A0A317Z4K2,UniRef:UniRef90_A0A2X2KBF0
contig_1	Pyrodigal	gene	2747248	2748051	.	-	.	ID=GCA000160335_02699_gene;locus_tag=GCA000160335_02699
contig_1	Pyrodigal	CDS	2747248	2748051	.	-	0	ID=GCA000160335_02699;Name=Subtilase family protease;locus_tag=GCA000160335_02699;product=Subtilase family protease;Parent=GCA000160335_02699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000089284.1,SO:0001217,UniParc:UPI00003B1A0E,UniRef:UniRef100_A0A7Z7W2Y8,UniRef:UniRef50_A0A7Z7W2Y8,UniRef:UniRef90_A0A7Z7W2Y8
contig_1	Pyrodigal	gene	2748535	2748735	.	+	.	ID=GCA000160335_02700_gene;locus_tag=GCA000160335_02700;gene=cspA
contig_1	Pyrodigal	CDS	2748535	2748735	.	+	0	ID=GCA000160335_02700;Name=Cold shock protein CspA;locus_tag=GCA000160335_02700;product=Cold shock protein CspA;gene=cspA;Parent=GCA000160335_02700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059079.1,SO:0001217,UniParc:UPI00000D77A7,UniRef:UniRef100_Q2FUQ9,UniRef:UniRef50_P0C0F1,UniRef:UniRef90_Q2FUQ9
contig_1	Pyrodigal	gene	2748862	2749431	.	-	.	ID=GCA000160335_02701_gene;locus_tag=GCA000160335_02701
contig_1	Pyrodigal	CDS	2748862	2749431	.	-	0	ID=GCA000160335_02701;Name=Helix-turn-helix family protein;locus_tag=GCA000160335_02701;product=Helix-turn-helix family protein;Parent=GCA000160335_02701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001054111.1,SO:0001217,UniParc:UPI00003B1A10,UniRef:UniRef100_A0A131JSL0,UniRef:UniRef50_A0A0H2VIN2,UniRef:UniRef90_A0A131JSL0
contig_1	Pyrodigal	gene	2749684	2750079	.	-	.	ID=GCA000160335_02702_gene;locus_tag=GCA000160335_02702
contig_1	Pyrodigal	CDS	2749684	2750079	.	-	0	ID=GCA000160335_02702;Name=DUF3147 domain-containing protein;locus_tag=GCA000160335_02702;product=DUF3147 domain-containing protein;Parent=GCA000160335_02702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000779134.1,SO:0001217,UniParc:UPI00000CAC75,UniRef:UniRef100_A0A7Z7W2T2,UniRef:UniRef50_Q2FUQ7,UniRef:UniRef90_Q2FUQ7
contig_1	Pyrodigal	gene	2750147	2750500	.	-	.	ID=GCA000160335_02703_gene;locus_tag=GCA000160335_02703
contig_1	Pyrodigal	CDS	2750147	2750500	.	-	0	ID=GCA000160335_02703;Name=Permease;locus_tag=GCA000160335_02703;product=Permease;Parent=GCA000160335_02703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000491382.1,SO:0001217,UniParc:UPI00000D771D,UniRef:UniRef100_Q2FUQ6,UniRef:UniRef50_Q2FUQ6,UniRef:UniRef90_Q2FUQ6
contig_1	Infernal	gene	2750655	2750927	.	+	.	ID=GCA000160335_02704_gene;locus_tag=GCA000160335_02704;gene=S35
contig_1	Infernal	ncRNA	2750655	2750927	2.1e-33	+	.	ID=GCA000160335_02704;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000160335_02704;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000160335_02704_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2751053	2751892	.	-	.	ID=GCA000160335_02705_gene;locus_tag=GCA000160335_02705;gene=noc
contig_1	Pyrodigal	CDS	2751053	2751892	.	-	0	ID=GCA000160335_02705;Name=nucleoid occlusion protein;locus_tag=GCA000160335_02705;product=nucleoid occlusion protein;Dbxref=GO:0032466,GO:0043565;gene=noc;Parent=GCA000160335_02705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_000742840.1,SO:0001217,UniParc:UPI00003B1A11,UniRef:UniRef100_A0A7Z7R194,UniRef:UniRef50_A0A6N3FL57,UniRef:UniRef90_Q2FUQ5
contig_1	Pyrodigal	gene	2751935	2752654	.	-	.	ID=GCA000160335_02706_gene;locus_tag=GCA000160335_02706;gene=rsmG
contig_1	Pyrodigal	CDS	2751935	2752654	.	-	0	ID=GCA000160335_02706;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000160335_02706;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000160335_02706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03501,RefSeq:WP_000215590.1,SO:0001217,UniParc:UPI00003B1A12,UniRef:UniRef100_Q6GD94,UniRef:UniRef50_P25813,UniRef:UniRef90_Q6GD94;ec_number=2.1.1.170
contig_1	Pyrodigal	gene	2752654	2754531	.	-	.	ID=GCA000160335_02707_gene;locus_tag=GCA000160335_02707;gene=mnmG
contig_1	Pyrodigal	CDS	2752654	2754531	.	-	0	ID=GCA000160335_02707;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA000160335_02707;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA000160335_02707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0445,COG:J,KEGG:K03495,RefSeq:WP_000249664.1,SO:0001217,UniParc:UPI0001B70032,UniRef:UniRef100_UPI0001B70032,UniRef:UniRef50_Q2FUQ3,UniRef:UniRef90_Q2FUQ3
contig_1	Pyrodigal	gene	2754598	2755977	.	-	.	ID=GCA000160335_02708_gene;locus_tag=GCA000160335_02708;gene=mnmE
contig_1	Pyrodigal	CDS	2754598	2755977	.	-	0	ID=GCA000160335_02708;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA000160335_02708;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0002098,GO:0003924,GO:0005525,GO:0005829,GO:0006400,GO:0030488,GO:0046872;gene=mnmE;Parent=GCA000160335_02708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0486,COG:J,RefSeq:WP_000362509.1,SO:0001217,UniParc:UPI000013745C,UniRef:UniRef100_Q2FUQ2,UniRef:UniRef50_Q8DPZ8,UniRef:UniRef90_Q2FUQ2;ec_number=3.6.-.-
contig_1	Pyrodigal	gene	2756121	2756468	.	-	.	ID=GCA000160335_02709_gene;locus_tag=GCA000160335_02709;gene=rnpA
contig_1	Pyrodigal	CDS	2756121	2756468	.	-	0	ID=GCA000160335_02709;Name=ribonuclease P protein component;locus_tag=GCA000160335_02709;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0001682,GO:0004526,GO:0008033,GO:0030677,GO:0042781;gene=rnpA;Parent=GCA000160335_02709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0594,COG:J,SO:0001217,UniParc:UPI0000134441,UniRef:UniRef100_Q5HCI2,UniRef:UniRef50_Q2FUQ1,UniRef:UniRef90_Q2FUQ1;ec_number=3.1.26.5
contig_1	Pyrodigal	gene	2756595	2756732	.	-	.	ID=GCA000160335_02710_gene;locus_tag=GCA000160335_02710;gene=rpmH
contig_1	Pyrodigal	CDS	2756595	2756732	.	-	0	ID=GCA000160335_02710;Name=50S ribosomal protein L34;locus_tag=GCA000160335_02710;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA000160335_02710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_000240855.1,SO:0001217,UniParc:UPI0000133FD1,UniRef:UniRef100_Q2FUQ0,UniRef:UniRef50_A5VMV2,UniRef:UniRef90_Q2FUQ0
##sequence-region contig_2 1 20449
contig_2	Bakta	region	1	20449	.	+	.	ID=contig_2;Name=contig_2;Is_circular=true
contig_2	Pyrodigal	gene	237	1181	.	+	.	ID=GCA000160335_02711_gene;locus_tag=GCA000160335_02711;gene=repA
contig_2	Pyrodigal	CDS	237	1181	.	+	0	ID=GCA000160335_02711;Name=RepA;locus_tag=GCA000160335_02711;product=RepA;gene=repA;Parent=GCA000160335_02711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001132442.1,SO:0001217,UniParc:UPI00015FD766,UniRef:UniRef100_D2J623,UniRef:UniRef50_A0A380JM21,UniRef:UniRef90_D2J9S7
contig_2	Pyrodigal	gene	1311	1499	.	+	.	ID=GCA000160335_02712_gene;locus_tag=GCA000160335_02712
contig_2	Pyrodigal	CDS	1311	1499	.	+	0	ID=GCA000160335_02712;Name=Replication protein;locus_tag=GCA000160335_02712;product=Replication protein;Parent=GCA000160335_02712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001794377.1,SO:0001217,UniParc:UPI0001B7006D,UniRef:UniRef100_D2J624,UniRef:UniRef50_D2JFL6,UniRef:UniRef90_D2JFL6
contig_2	Pyrodigal	gene	1504	1650	.	+	.	ID=GCA000160335_02713_gene;locus_tag=GCA000160335_02713
contig_2	Pyrodigal	CDS	1504	1650	.	+	0	ID=GCA000160335_02713;Name=hypothetical protein;locus_tag=GCA000160335_02713;product=hypothetical protein;Parent=GCA000160335_02713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001092935.1,SO:0001217,UniParc:UPI00000B678D,UniRef:UniRef100_Q8VVR7,UniRef:UniRef50_Q8VVR7,UniRef:UniRef90_Q8VVR7
contig_2	Pyrodigal	gene	2231	2419	.	+	.	ID=GCA000160335_02714_gene;locus_tag=GCA000160335_02714
contig_2	Pyrodigal	CDS	2231	2419	.	+	0	ID=GCA000160335_02714;Name=Membrane protein;locus_tag=GCA000160335_02714;product=Membrane protein;Parent=GCA000160335_02714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030810.1,SO:0001217,UniParc:UPI0001B5A658,UniRef:UniRef100_D2J626,UniRef:UniRef50_D2J5Y9,UniRef:UniRef90_D2J5Y9
contig_2	Infernal	gene	2641	2733	.	-	.	ID=GCA000160335_02715_gene;locus_tag=GCA000160335_02715;gene=fstAT
contig_2	Infernal	ncRNA	2641	2733	9.2e-16	-	.	ID=GCA000160335_02715;Name=Fst antitoxin sRNA;locus_tag=GCA000160335_02715;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000160335_02715_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_2	Pyrodigal	gene	2930	3604	.	+	.	ID=GCA000160335_02716_gene;locus_tag=GCA000160335_02716;gene=tnp
contig_2	Pyrodigal	CDS	2930	3604	.	+	0	ID=GCA000160335_02716;Name=IS6 family IS431R transposase;locus_tag=GCA000160335_02716;product=IS6 family IS431R transposase;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000160335_02716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3316,COG:X,IS:IS431R,RefSeq:WP_001105988.1,SO:0001217,UniParc:UPI00000B2F56,UniRef:UniRef100_Q56383,UniRef:UniRef50_P0C1L0,UniRef:UniRef90_P0C1L0
contig_2	Pyrodigal	gene	3723	4238	.	+	.	ID=GCA000160335_02717_gene;locus_tag=GCA000160335_02717
contig_2	Pyrodigal	CDS	3723	4238	.	+	0	ID=GCA000160335_02717;Name=hypothetical protein;locus_tag=GCA000160335_02717;product=hypothetical protein;Parent=GCA000160335_02717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000377078.1,SO:0001217,UniParc:UPI0001B5A634,UniRef:UniRef100_Q51999,UniRef:UniRef50_A0A4Y8LQU7,UniRef:UniRef90_A0A850G2Z0
contig_2	Pyrodigal	gene	4433	5083	.	-	.	ID=GCA000160335_02718_gene;locus_tag=GCA000160335_02718;gene=merB
contig_2	Pyrodigal	CDS	4433	5083	.	-	0	ID=GCA000160335_02718;Name=organomercurial lyase MerB;locus_tag=GCA000160335_02718;product=organomercurial lyase MerB;Dbxref=GO:0018836,GO:0018942,GO:0046689;gene=merB;Parent=GCA000160335_02718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:BAB47641.1,RefSeq:WP_000790333.1,SO:0001217,UniParc:UPI0000000E96,UniRef:UniRef100_P08653,UniRef:UniRef50_P16172,UniRef:UniRef90_P08653;ec_number=4.99.1.2
contig_2	Pyrodigal	gene	5165	6262	.	-	.	ID=GCA000160335_02719_gene;locus_tag=GCA000160335_02719;gene=merA
contig_2	Pyrodigal	CDS	5165	6262	.	-	0	ID=GCA000160335_02719;Name=mercury(II) reductase;locus_tag=GCA000160335_02719;product=mercury(II) reductase;gene=merA;Parent=GCA000160335_02719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AAA98245.1,SO:0001217,UniRef:UniRef50_A0A645CNN1
contig_2	Pyrodigal	gene	6389	6808	.	-	.	ID=GCA000160335_02720_gene;locus_tag=GCA000160335_02720;pseudogene=unitary
contig_2	Pyrodigal	CDS	6389	6808	.	-	0	ID=GCA000160335_02720;Name=FAD-dependent oxidoreductase;locus_tag=GCA000160335_02720;product=FAD-dependent oxidoreductase;pseudogene=unitary;Parent=GCA000160335_02720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1I0U1C8,UniRef:UniRef90_UPI00190CC7C3
contig_2	Pyrodigal	gene	6866	7252	.	-	.	ID=GCA000160335_02721_gene;locus_tag=GCA000160335_02721;gene=merT
contig_2	Pyrodigal	CDS	6866	7252	.	-	0	ID=GCA000160335_02721;Name=mercuric transport protein MerT;locus_tag=GCA000160335_02721;product=mercuric transport protein MerT;Dbxref=GO:0005886,GO:0046689,GO:0046872;gene=merT;Parent=GCA000160335_02721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001794630,NCBIProtein:ADA79992.1,RefSeq:WP_001794630.1,SO:0001217,UniParc:UPI000012EF35,UniRef:UniRef100_P08656,UniRef:UniRef50_P08656,UniRef:UniRef90_P08656
contig_2	Pyrodigal	gene	7340	8020	.	-	.	ID=GCA000160335_02722_gene;locus_tag=GCA000160335_02722;gene=ccdA
contig_2	Pyrodigal	CDS	7340	8020	.	-	0	ID=GCA000160335_02722;Name=Cytochrome C biogenesis protein transmembrane domain-containing protein;locus_tag=GCA000160335_02722;product=Cytochrome C biogenesis protein transmembrane domain-containing protein;gene=ccdA;Parent=GCA000160335_02722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG0785,RefSeq:WP_000010352.1,SO:0001217,UniParc:UPI00000B556A,UniRef:UniRef100_Q51998,UniRef:UniRef50_A0A0F5XGJ3,UniRef:UniRef90_A0A1Z1UZ63
contig_2	Pyrodigal	gene	8017	8502	.	-	.	ID=GCA000160335_02723_gene;locus_tag=GCA000160335_02723
contig_2	Pyrodigal	CDS	8017	8502	.	-	0	ID=GCA000160335_02723;Name=AhpC/TSA family protein;locus_tag=GCA000160335_02723;product=AhpC/TSA family protein;Parent=GCA000160335_02723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000746202.1,SO:0001217,UniParc:UPI00000BAEFE,UniRef:UniRef100_Q51997,UniRef:UniRef50_Q51997,UniRef:UniRef90_Q51997
contig_2	Pyrodigal	gene	8519	8926	.	-	.	ID=GCA000160335_02724_gene;locus_tag=GCA000160335_02724;gene=merR
contig_2	Pyrodigal	CDS	8519	8926	.	-	0	ID=GCA000160335_02724;Name=Hg(II)-responsive transcriptional regulator MerR;locus_tag=GCA000160335_02724;product=Hg(II)-responsive transcriptional regulator MerR;Dbxref=GO:0003677,GO:0003700,GO:0006355,GO:0045340,GO:0046689;gene=merR;Parent=GCA000160335_02724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000525462,COG:COG0789,COG:K,RefSeq:WP_000525462.1,SO:0001217,UniParc:UPI000012EF2D,UniRef:UniRef100_P22874,UniRef:UniRef50_P22853,UniRef:UniRef90_P22874
contig_2	Pyrodigal	gene	9226	9852	.	-	.	ID=GCA000160335_02725_gene;locus_tag=GCA000160335_02725
contig_2	Pyrodigal	CDS	9226	9852	.	-	0	ID=GCA000160335_02725;Name=Pyridine nucleotide-disulfide oxidoreductase%2Cdimerization domain protein;locus_tag=GCA000160335_02725;product=Pyridine nucleotide-disulfide oxidoreductase%2Cdimerization domain protein;Parent=GCA000160335_02725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C0AAD1,UniRef:UniRef100_D2JKZ8,UniRef:UniRef50_D2JKU8,UniRef:UniRef90_D2JKU8
contig_2	Pyrodigal	gene	10025	10699	.	+	.	ID=GCA000160335_02726_gene;locus_tag=GCA000160335_02726;gene=tnp
contig_2	Pyrodigal	CDS	10025	10699	.	+	0	ID=GCA000160335_02726;Name=IS6 family IS431L transposase;locus_tag=GCA000160335_02726;product=IS6 family IS431L transposase;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000160335_02726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3316,COG:X,IS:IS431L,RefSeq:WP_001105968.1,SO:0001217,UniParc:UPI00000B3B54,UniRef:UniRef100_Q56382,UniRef:UniRef50_P0C1L0,UniRef:UniRef90_P0C1L0
contig_2	Pyrodigal	gene	10934	13117	.	-	.	ID=GCA000160335_02727_gene;locus_tag=GCA000160335_02727;gene=cadA
contig_2	Pyrodigal	CDS	10934	13117	.	-	0	ID=GCA000160335_02727;Name=cadmium-translocating P-type ATPase CadA;locus_tag=GCA000160335_02727;product=cadmium-translocating P-type ATPase CadA;Dbxref=GO:0005524,GO:0005886,GO:0006826,GO:0008551,GO:0016887,GO:0046872;gene=cadA;Parent=GCA000160335_02727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000003267,BlastRules:WP_000378396,COG:COG2608,COG:P,RefSeq:WP_000003267.1,SO:0001217,UniParc:UPI0000126DA5,UniRef:UniRef100_P20021,UniRef:UniRef50_P20021,UniRef:UniRef90_P20021;ec_number=7.2.2.21
contig_2	Pyrodigal	gene	13110	13478	.	-	.	ID=GCA000160335_02728_gene;locus_tag=GCA000160335_02728;gene=cadC
contig_2	Pyrodigal	CDS	13110	13478	.	-	0	ID=GCA000160335_02728;Name=Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC;locus_tag=GCA000160335_02728;product=Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC;Dbxref=GO:0003677,GO:0003700,GO:0046686,GO:0046872;gene=cadC;Parent=GCA000160335_02728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000726007,COG:COG0640,COG:K,NCBIProtein:AAB59153.1,RefSeq:WP_000726007.1,SO:0001217,UniParc:UPI0000126DAC,UniRef:UniRef100_P20047,UniRef:UniRef50_P20047,UniRef:UniRef90_P20047
contig_2	Pyrodigal	gene	13848	14426	.	+	.	ID=GCA000160335_02729_gene;locus_tag=GCA000160335_02729;gene=binR
contig_2	Pyrodigal	CDS	13848	14426	.	+	0	ID=GCA000160335_02729;Name=Transposon Tn552 DNA-invertase BinR;locus_tag=GCA000160335_02729;product=Transposon Tn552 DNA-invertase BinR;Dbxref=GO:0000150,GO:0003677,GO:0015074;gene=binR;Parent=GCA000160335_02729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K14060,RefSeq:WP_000690630.1,SO:0001217,UniParc:UPI000012694B,UniRef:UniRef100_P19241,UniRef:UniRef50_P19241,UniRef:UniRef90_P19241
contig_2	Pyrodigal	gene	14557	15165	.	+	.	ID=GCA000160335_02730_gene;locus_tag=GCA000160335_02730;gene=bin3
contig_2	Pyrodigal	CDS	14557	15165	.	+	0	ID=GCA000160335_02730;Name=Putative transposon Tn552 DNA-invertase bin3;locus_tag=GCA000160335_02730;product=Putative transposon Tn552 DNA-invertase bin3;Dbxref=GO:0000150,GO:0003677,GO:0015074,GO:0032196;gene=bin3;Parent=GCA000160335_02730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000583535.1,SO:0001217,UniParc:UPI0000126944,UniRef:UniRef100_P20384,UniRef:UniRef50_P20384,UniRef:UniRef90_P20384
contig_2	Pyrodigal	gene	15356	15751	.	-	.	ID=GCA000160335_02731_gene;locus_tag=GCA000160335_02731;gene=arsC
contig_2	Pyrodigal	CDS	15356	15751	.	-	0	ID=GCA000160335_02731;Name=thioredoxin-dependent arsenate reductase;locus_tag=GCA000160335_02731;product=thioredoxin-dependent arsenate reductase;Dbxref=GO:0004725,GO:0005737,GO:0030612,GO:0046685;gene=arsC;Parent=GCA000160335_02731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,KEGG:K03741,NCBIProtein:AAA25638.1,RefSeq:WP_000358995.1,SO:0001217,UniParc:UPI0000112452,UniRef:UniRef100_P0A005,UniRef:UniRef50_Q49WS7,UniRef:UniRef90_Q49WS7;ec_number=1.20.4.4
contig_2	Pyrodigal	gene	15769	17058	.	-	.	ID=GCA000160335_02732_gene;locus_tag=GCA000160335_02732;gene=arsB
contig_2	Pyrodigal	CDS	15769	17058	.	-	0	ID=GCA000160335_02732;Name=arsenite efflux transporter membrane subunit ArsB;locus_tag=GCA000160335_02732;product=arsenite efflux transporter membrane subunit ArsB;Dbxref=GO:0005886,GO:0015105,GO:0015700,GO:0016020,GO:0046685;gene=arsB;Parent=GCA000160335_02732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1055,COG:P,KEGG:K03893,NCBIProtein:AAA25637.1,RefSeq:WP_000153629.1,SO:0001217,UniParc:UPI00001260A5,UniRef:UniRef100_P30329,UniRef:UniRef50_Q5HF02,UniRef:UniRef90_P30329
contig_2	Pyrodigal	gene	17058	17372	.	-	.	ID=GCA000160335_02733_gene;locus_tag=GCA000160335_02733;gene=arsR
contig_2	Pyrodigal	CDS	17058	17372	.	-	0	ID=GCA000160335_02733;Name=As(III)-sensing metalloregulatory transcriptional repressor ArsR;locus_tag=GCA000160335_02733;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;Dbxref=GO:0003677,GO:0003700,GO:0046685;gene=arsR;Parent=GCA000160335_02733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000120606,COG:COG0640,COG:K,NCBIProtein:AAA25636.1,RefSeq:WP_000120606.1,SO:0001217,UniParc:UPI00001260B1,UniRef:UniRef100_P30338,UniRef:UniRef50_P30338,UniRef:UniRef90_P30338
contig_2	Pyrodigal	gene	17433	17750	.	-	.	ID=GCA000160335_02734_gene;locus_tag=GCA000160335_02734;gene=spoIVCA
contig_2	Pyrodigal	CDS	17433	17750	.	-	0	ID=GCA000160335_02734;Name=Recombinase Sin;locus_tag=GCA000160335_02734;product=Recombinase Sin;gene=spoIVCA;Parent=GCA000160335_02734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,SO:0001217,UniParc:UPI0001C0AA91,UniRef:UniRef100_A0A6G7QQG3,UniRef:UniRef50_P20384,UniRef:UniRef90_Q1XG14
contig_2	Pyrodigal	gene	18161	18553	.	+	.	ID=GCA000160335_02735_gene;locus_tag=GCA000160335_02735
contig_2	Pyrodigal	CDS	18161	18553	.	+	0	ID=GCA000160335_02735;Name=ABC transporter ATP-binding protein;locus_tag=GCA000160335_02735;product=ABC transporter ATP-binding protein;Parent=GCA000160335_02735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B5A65C,UniRef:UniRef100_D2J620,UniRef:UniRef50_A1KWX0,UniRef:UniRef90_A1KWX0
contig_2	Pyrodigal	gene	18735	18929	.	+	.	ID=GCA000160335_02736_gene;locus_tag=GCA000160335_02736
contig_2	Pyrodigal	CDS	18735	18929	.	+	0	ID=GCA000160335_02736;Name=DNA-binding protein;locus_tag=GCA000160335_02736;product=DNA-binding protein;Parent=GCA000160335_02736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B5A65B,UniRef:UniRef100_D2J621,UniRef:UniRef50_D2J621,UniRef:UniRef90_D2J621
contig_2	Pyrodigal	gene	19273	19368	.	-	.	ID=GCA000160335_02737_gene;locus_tag=GCA000160335_02737
contig_2	Pyrodigal	CDS	19273	19368	.	-	0	ID=GCA000160335_02737;Name=hypothetical protein;locus_tag=GCA000160335_02737;product=hypothetical protein;Parent=GCA000160335_02737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001B5A65A,UniRef:UniRef100_A0A380EAH4,UniRef:UniRef50_A0A380EAH4,UniRef:UniRef90_A0A380EAH4
contig_2	Pyrodigal	gene	19472	20242	.	-	.	ID=GCA000160335_02738_gene;locus_tag=GCA000160335_02738
contig_2	Pyrodigal	CDS	19472	20242	.	-	0	ID=GCA000160335_02738;Name=DUF536 domain-containing protein;locus_tag=GCA000160335_02738;product=DUF536 domain-containing protein;Parent=GCA000160335_02738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848988.1,SO:0001217,UniParc:UPI00000B4CBD,UniRef:UniRef100_Q9L8I5,UniRef:UniRef50_Q9L8I5,UniRef:UniRef90_Q9L8I5